Citrus Sinensis ID: 041783

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-----
Protein Sequence
MLRLWKWYQNCLAVHPVKTQVVSSGLIWGFGDVAAQSITHLTAQNRLHNQNEKSTEDTGNGNNELKLNWNRVAKTSFFGFAFVGPVGHFWYEGLDRFIRNRFLMQPNSPRFVATKVAIDGGLFGPLDLLVFFSYMGFAAGKSFPQVKEDVKRDFLPALILEGGLWPLLQVANFRFVPVPYQLLYVNIFCLLDSCFLSWIEQQEDAPWKQWIKSFLPSKGKKGHDG
Secondary Structure (PSIPRED)
cHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccHHHHHHHHHHHccccccHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHcccccHHHHHHHcccccccccEEHHHHHHHHHHHHHHHHHccccccHHHHHHHcccccccccccc
Secondary Structure Prediction (SSPRO)
cHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccHccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHccEEccHHEEEEEEEccHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHccccHHHcccccc
Coil and Loop (DISEMBL)
MLRLWKWYQnclavhpvktqvvssgliwgfGDVAAQSITHLTAQnrlhnqnekstedtgngnnelKLNWNRVAKTsffgfafvgpvghfwYEGLDRFIRNrflmqpnsprfVATKVaidgglfgplDLLVFFSYmgfaagksfpqvkedvkrDFLPALilegglwpllqvanfrfvpvpyQLLYVNIFCLLDSCFLSWIEQQEDAPWKQWIksflpskgkkghdg
Flexible Loop (DISEMBL)
MLRLWKWYQNCLAVHPVKTQVVSSGLIWGFGDVAAQSITHLTAqnrlhnqnekstedtgngnNELKLNWNRVAKTSFFGFAFVGPVGHFWYEGLDRFIRNRFLMQPNSPRFVATKVAIDGGLFGPLDLLVFFSYMGFAAGKSFPQVKEDVKRDFLPALILEGGLWPLLQVANFRFVPVPYQLLYVNIFCLLDSCFLSWIEQQEDAPWKQWiksflpskgkkghdg
Low Complexity Region (SEG)
MLRLWKWYQNCLAVHPVKTQVVSSGLIWGFGDVAAQSITHLTAQNRLHNQNEKSTEDTGNGNNELKLNWNRVAKTSFFGFAFVGPVGHFWYEGLDRFIRNRFLMQPNSPRFVATKVAIDGGLFGPLDLLVFFSYMGFAAGKSFPQVKEDVKRDFLPALILEGGLWPLLQVANFRFVPVPYQLLYVNIFCLLDSCFLSWIEQQEDAPWKQWIKSFLPSKGKKGHDG
Disordered region (IsUnstruct)
**RLWKWYQNCLAVHPVKTQVVSSGLIWGFGDVAAQSITHLTA*********************LKLNWNRVAKTSFFGFAFVGPVGHFWYEGLDRFIRNRFLMQPNSPRFVATKVAIDGGLFGPLDLLVFFSYMGFAAGKSFPQVKEDVKRDFLPALILEGGLWPLLQVANFRFVPVPYQLLYVNIFCLLDSCFLSWIEQQEDAPWKQWIKSFL**********
Disordered Region (DISOPRED)
*LRLWKWYQNCLAVHPVKTQVVSSGLIWGFGDVAAQSITHLTA***************GNGNNELKLNWNRVAKTSFFGFAFVGPVGHFWYEGLDRFIRNRFLMQPNSPRFVATKVAIDGGLFGPLDLLVFFSYMGFAAGKSFPQVKEDVKRDFLPALILEGGLWPLLQVANFRFVPVPYQLLYVNIFCLLDSCFLS****************************
Disordered Region (DISEMBL)
MLRLWKWYQNCLAVHPVKTQVVSSGLIWGFGDVAAQSITHLTAQNRLH***********NGNNELKLNWNRVAKTSFFGFAFVGPVGHFWYEGLDRFIRNRFLMQPNSPRFVATKVAIDGGLFGPLDLLVFFSYMGFAAGKSFPQVKEDVKRDFLPALILEGGLWPLLQVANFRFVPVPYQLLYVNIFCLLDSCFLSWIEQQEDAPWKQWIKSFLP*********
Disordered Region (DISPRO)
MLRLWKWYQNCLAVHPVKTQVVSSGLIWGFGDVAAQSITHLTA******************N*ELKLNWNRVAKTSFFGFAFVGPVGHFWYEGLDRFIRNRFLMQPNSPRFVATKVAIDGGLFGPLDLLVFFSYMGFAAGKSFPQVKEDVKRDFLPALILEGGLWPLLQVANFRFVPVPYQLLYVNIFCLLDSCFLSWIEQQEDAPWKQWIKSFLP*********
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MLRLWKWYQNCLAVHPVKTQVVSSGLIWGFGDVAAQSITHLTAQNRLHNQNEKSTEDTGNGNNELKLNWNRVAKTSFFGFAFVGPVGHFWYEGLDRFIRNRFLMQPNSPRFVATKVAIDGGLFGPLDLLVFFSYMGFAAGKSFPQVKEDVKRDFLPALILEGGLWPLLQVANFRFVPVPYQLLYVNIFCLLDSCFLSWIEQQEDAPWKQWIKSFLPSKGKKGHDG
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	225	2.2.26 [Sep-21-2011]
Q7SCY7	172	Protein sym-1 OS=Neurospo	N/A	no	0.755	0.988	0.289	1e-20
Q66GV0	177	Protein Mpv17 OS=Xenopus	N/A	no	0.76	0.966	0.341	3e-19
Q5TZ51	177	Protein Mpv17 OS=Danio re	yes	no	0.764	0.971	0.313	9e-19
Q5BK62	176	Protein Mpv17 OS=Rattus n	yes	no	0.773	0.988	0.316	5e-18
P39210	176	Protein Mpv17 OS=Homo sap	yes	no	0.755	0.965	0.318	6e-18
Q54XX9	193	PXMP2/4 family protein 2	yes	no	0.808	0.943	0.289	8e-18
Q4IPX8	175	Protein SYM1 OS=Gibberell	yes	no	0.755	0.971	0.299	1e-17
P19258	176	Protein Mpv17 OS=Mus musc	yes	no	0.773	0.988	0.316	2e-17
Q2KIN6	176	Protein Mpv17 OS=Bos taur	yes	no	0.755	0.965	0.323	3e-17
Q2TXA2	173	Protein sym1 OS=Aspergill	yes	no	0.764	0.994	0.305	2e-16

>sp|Q7SCY7|SYM1_NEUCR Protein sym-1 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=sym-1 PE=3 SV=2

 Score = 99.8 bits (247), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 57/197 (28%), Positives = 101/197 (51%), Gaps = 27/197 (13%)

Query: 6   KWYQNCLAVHPVKTQVVSSGLIWGFGDVAAQSITHLTAQNRLHNQNEKSTEDTGNGNNEL 65
            WY+  LA  P+ TQ V++ +++G GDVAAQ +                 +  G  N++L
Sbjct: 3   SWYKAQLAARPLLTQAVTTSILFGVGDVAAQQLV----------------DRRGLSNHDL 46

Query: 66  KLNWNRVAKTSFFGFAFVGPVGHFWYEGLDRFIRNRFLMQPNSPRFVATKVAIDGGLFGP 125
                R  +   +G A  GP    W+    RF++ R ++  ++ + +  +VA D GLF P
Sbjct: 47  ----TRTGRMVLYGGAVFGPAATTWF----RFLQKRVVVPGSTNKTILARVAADQGLFAP 98

Query: 126 LDLLVFFSYMGFAAGKSFPQVKEDVKRDFLPALILEGGLWPLLQVANFRFVPVPYQLLYV 185
             + +F   M    G     VKE +++++  AL     +WP +Q+ NF+ VP+ +++L+V
Sbjct: 99  TFIGIFLGSMAVLEGTD---VKEKLQKNYWEALSTNWMVWPFVQMVNFKVVPLDHRVLFV 155

Query: 186 NIFCLLDSCFLSWIEQQ 202
           N+  +  +C+LSW+  Q
Sbjct: 156 NVISIGWNCYLSWLNGQ 172

May be involved in cellular response to stress. Required to maintain mitochondrial DNA (mtDNA) integrity and stability.
Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) (taxid: 367110)

>sp|Q66GV0|MPV17_XENLA Protein Mpv17 OS=Xenopus laevis GN=mpv17 PE=2 SV=2

 Score = 95.1 bits (235), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 68/199 (34%), Positives = 95/199 (47%), Gaps = 28/199 (14%)

Query: 1   MLRLWKWYQNCLAVHPVKTQVVSSGLIWGFGDVAAQSITHLTAQNRLHNQNEKSTEDTGN 60
           M  LW+ YQ  L  HP K Q+V++G + G GDV +Q +                 E  G 
Sbjct: 1   MAGLWRAYQRLLGAHPWKVQIVTAGSLVGVGDVISQQLL----------------ERKGL 44

Query: 61  GNNELKLNWNRVAKTSFFGFAFVGPVGHFWYEGLDRFIRNRFLMQPNSPRFVA-TKVAID 119
             + ++    R  K    GF FVGPV   WY+ LDR I       P S + VA  K+ +D
Sbjct: 45  KGHSIE----RTVKMMGIGFCFVGPVVGGWYKILDRII-------PGSGKPVALKKMLLD 93

Query: 120 GGLFGPLDLLVFFSYMGFAAGKSFPQVKEDVKRDFLPALILEGGLWPLLQVANFRFVPVP 179
              F P  L  F S      G S  Q+   +KRD+  ALI    +WP +QVANF F+P+ 
Sbjct: 94  QVAFAPCFLGCFLSIASALNGLSGEQIWGKLKRDYKDALITNYYIWPAVQVANFYFIPLY 153

Query: 180 YQLLYVNIFCLLDSCFLSW 198
           ++L  V    ++ + +LSW
Sbjct: 154 HRLAVVQFVAIIWNSYLSW 172

Involved in mitochondria homeostasis.

Xenopus laevis (taxid: 8355)

>sp|Q5TZ51|MPV17_DANRE Protein Mpv17 OS=Danio rerio GN=mpv17 PE=2 SV=1

 Score = 93.6 bits (231), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 62/198 (31%), Positives = 93/198 (46%), Gaps = 26/198 (13%)

Query: 1   MLRLWKWYQNCLAVHPVKTQVVSSGLIWGFGDVAAQSITHLTAQNRLHNQNEKSTEDTGN 60
           M  LW+ YQ  +A HP K Q++++G + G GDV +Q    L  +  L N N +       
Sbjct: 1   MAGLWRSYQALMAKHPWKVQIITAGSLVGVGDVISQ---QLIERRGLANHNAR------- 50

Query: 61  GNNELKLNWNRVAKTSFFGFAFVGPVGHFWYEGLDRFIRNRFLMQPNSPRFVATKVAIDG 120
                     R AK    GF FVGPV   WY+ LD+ +         +      K+ +D 
Sbjct: 51  ----------RTAKMMSIGFFFVGPVVGGWYKVLDKLVTG------GTKSAALKKMLVDQ 94

Query: 121 GLFGPLDLLVFFSYMGFAAGKSFPQVKEDVKRDFLPALILEGGLWPLLQVANFRFVPVPY 180
             F P  L  F    G   G +  +    ++RD+  ALI    LWP +Q+ANF F+P+ +
Sbjct: 95  VGFAPCFLGAFLGITGTLNGLTVEENVAKLQRDYTDALISNYYLWPPVQIANFYFIPLHH 154

Query: 181 QLLYVNIFCLLDSCFLSW 198
           +L  V I  ++ + +LSW
Sbjct: 155 RLAVVQIVAVVWNSYLSW 172

Involved in mitochondria homeostasis.

Danio rerio (taxid: 7955)

>sp|Q5BK62|MPV17_RAT Protein Mpv17 OS=Rattus norvegicus GN=Mpv17 PE=2 SV=1

 Score = 91.3 bits (225), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 64/202 (31%), Positives = 92/202 (45%), Gaps = 28/202 (13%)

Query: 2   LRLWKWYQNCLAVHPVKTQVVSSGLIWGFGDVAAQSITHLTAQNRLHNQNEKSTEDTGNG 61
           + LW+ YQ  LA HP K QV+++G + G GD+ +Q +     + R   Q++         
Sbjct: 1   MALWRAYQRALAAHPWKVQVLTAGSLMGLGDIISQQLV----ERRGLQQHQT-------- 48

Query: 62  NNELKLNWNRVAKTSFFGFAFVGPVGHFWYEGLDRFIRNRFLMQPNSPRFVA-TKVAIDG 120
                    R    +  G  FVGPV   WY  LD  I       P + +  A  K+ +D 
Sbjct: 49  --------GRTLTMASLGCGFVGPVVGGWYRVLDHLI-------PGTTKVNALKKMLLDQ 93

Query: 121 GLFGPLDLLVFFSYMGFAAGKSFPQVKEDVKRDFLPALILEGGLWPLLQVANFRFVPVPY 180
           G F P  L  F   +G   G S       +KRD+  ALI    LWP +Q+ANF  VP+ Y
Sbjct: 94  GGFAPCFLGCFLPLVGVLNGMSAQDNWAKLKRDYPDALITNYYLWPAVQLANFYLVPLHY 153

Query: 181 QLLYVNIFCLLDSCFLSWIEQQ 202
           +L  V    ++ + +LSW   Q
Sbjct: 154 RLAVVQCVAVVWNSYLSWKAHQ 175

Involved in mitochondria homeostasis. May be involved in the metabolism of reactive oxygen species and control of oxidative phosphorylation and mitochondrial DNA (mtDNA) maintenance.

Rattus norvegicus (taxid: 10116)

>sp|P39210|MPV17_HUMAN Protein Mpv17 OS=Homo sapiens GN=MPV17 PE=1 SV=1

 Score = 90.9 bits (224), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 63/198 (31%), Positives = 94/198 (47%), Gaps = 28/198 (14%)

Query: 2   LRLWKWYQNCLAVHPVKTQVVSSGLIWGFGDVAAQSITHLTAQNRLHNQNEKSTEDTGNG 61
           + LW+ YQ  LA HP K QV+++G + G GD+ +Q +     + R   ++++        
Sbjct: 1   MALWRAYQRALAAHPWKVQVLTAGSLMGLGDIISQQLV----ERRGLQEHQR-------- 48

Query: 62  NNELKLNWNRVAKTSFFGFAFVGPVGHFWYEGLDRFIRNRFLMQPNSPRFVA-TKVAIDG 120
                    R       G  FVGPV   WY+ LDRFI       P + +  A  K+ +D 
Sbjct: 49  --------GRTLTMVSLGCGFVGPVVGGWYKVLDRFI-------PGTTKVDALKKMLLDQ 93

Query: 121 GLFGPLDLLVFFSYMGFAAGKSFPQVKEDVKRDFLPALILEGGLWPLLQVANFRFVPVPY 180
           G F P  L  F   +G   G S       ++RD+  ALI    LWP +Q+ANF  VP+ Y
Sbjct: 94  GGFAPCFLGCFLPLVGALNGLSAQDNWAKLQRDYPDALITNYYLWPAVQLANFYLVPLHY 153

Query: 181 QLLYVNIFCLLDSCFLSW 198
           +L  V    ++ + +LSW
Sbjct: 154 RLAVVQCVAVIWNSYLSW 171

Involved in mitochondria homeostasis. May be involved in the metabolism of reactive oxygen species and control of oxidative phosphorylation and mitochondrial DNA (mtDNA) maintenance.

Homo sapiens (taxid: 9606)

>sp|Q54XX9|PX24B_DICDI PXMP2/4 family protein 2 OS=Dictyostelium discoideum GN=DDB_G0278529 PE=3 SV=1

 Score = 90.5 bits (223), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 59/204 (28%), Positives = 96/204 (47%), Gaps = 22/204 (10%)

Query: 1   MLRLWKWYQNCLAVHPVKTQVVSSGLIWGFGDVAAQSITHLTAQNRLHNQNEKSTEDTGN 60
           M +LW  Y   L  HP+ T+ +S+G + G GD+ AQ + H         ++EKS      
Sbjct: 1   MRKLWGLYLGLLDNHPLVTKSLSTGFLMGTGDILAQRLEH-------KFKDEKS------ 47

Query: 61  GNNELKLNWNRVAKTSFFGFAFVGPVGHFWYEGLDRFIRNRFLMQPNSPRFVATKVAIDG 120
              + KL++ RVA  S  G  + GP+ H+WY  LD       +++      +  K+ ID 
Sbjct: 48  ---QFKLDYKRVATMSTVGIFYSGPMLHYWYRSLD------IMVKGEGRSVIIKKMLIDQ 98

Query: 121 GLFGPLDLLVFFSYMGFAAGKSFPQVKEDVKRDFLPALILEGGLWPLLQVANFRFVPVPY 180
            LF P+ +  F +   F   K   +  E+  ++   A+ +   +WP  Q+ NF  VP   
Sbjct: 99  LLFAPVAIGGFMTVTNFINNKGELKNLENFTKELFYAVKINWLIWPAAQIINFSLVPPNL 158

Query: 181 QLLYVNIFCLLDSCFLSWIEQQED 204
           ++LY +I  +    FLS I   +D
Sbjct: 159 RVLYSSIISIFWGMFLSHISFDKD 182

Dictyostelium discoideum (taxid: 44689)

>sp|Q4IPX8|SYM1_GIBZE Protein SYM1 OS=Gibberella zeae (strain PH-1 / ATCC MYA-4620 / FGSC 9075 / NRRL 31084) GN=SYM1 PE=3 SV=1

 Score = 89.7 bits (221), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 59/197 (29%), Positives = 92/197 (46%), Gaps = 27/197 (13%)

Query: 6   KWYQNCLAVHPVKTQVVSSGLIWGFGDVAAQSITHLTAQNRLHNQNEKSTEDTGNGNNEL 65
           +WY + LA  P+ TQ V++  ++  GDV AQ +                 E  G   ++L
Sbjct: 6   RWYNSRLAARPLLTQSVTTAFLFATGDVTAQQLV----------------EKRGAQKHDL 49

Query: 66  KLNWNRVAKTSFFGFAFVGPVGHFWYEGLDRFIRNRFLMQPNSPRFVATKVAIDGGLFGP 125
                R  + + +G    GPV   W+     F+  R  ++ N    V  +VA D   F P
Sbjct: 50  V----RTGRMALYGGFVFGPVATTWFA----FLARRVNVRNNKKAEVLARVACDQLGFAP 101

Query: 126 LDLLVFFSYMGFAAGKSFPQVKEDVKRDFLPALILEGGLWPLLQVANFRFVPVPYQLLYV 185
           + + VF S M    GKS   VKE + + + PAL     +WP +QV NF  +P+ Y+L + 
Sbjct: 102 VMIGVFLSSMATMEGKS---VKERIDKTWWPALKANWMVWPAVQVINFSLIPLQYRLFFA 158

Query: 186 NIFCLLDSCFLSWIEQQ 202
           NI  +  + +LSW+  Q
Sbjct: 159 NIIAIGWNSYLSWVNSQ 175

May be involved in cellular response to stress. Required to maintain mitochondrial DNA (mtDNA) integrity and stability.

Gibberella zeae (strain PH-1 / ATCC MYA-4620 / FGSC 9075 / NRRL 31084) (taxid: 229533)

>sp|P19258|MPV17_MOUSE Protein Mpv17 OS=Mus musculus GN=Mpv17 PE=2 SV=1

 Score = 89.7 bits (221), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 64/202 (31%), Positives = 92/202 (45%), Gaps = 28/202 (13%)

Query: 2   LRLWKWYQNCLAVHPVKTQVVSSGLIWGFGDVAAQSITHLTAQNRLHNQNEKSTEDTGNG 61
           + LW+ YQ  LA HP K QV+++G + G GD+ +Q +     + R   Q++         
Sbjct: 1   MALWRAYQRALAAHPWKVQVLTAGSLMGVGDMISQQLV----ERRGLQQHQA-------- 48

Query: 62  NNELKLNWNRVAKTSFFGFAFVGPVGHFWYEGLDRFIRNRFLMQPNSPRFVA-TKVAIDG 120
                    R       G  FVGPV   WY+ LD  I       P + +  A  K+ +D 
Sbjct: 49  --------GRTLTMVSLGCGFVGPVVGGWYKVLDHLI-------PGTTKVHALKKMLLDQ 93

Query: 121 GLFGPLDLLVFFSYMGFAAGKSFPQVKEDVKRDFLPALILEGGLWPLLQVANFRFVPVPY 180
           G F P  L  F   +G   G S       +KRD+  ALI    LWP +Q+ANF  VP+ Y
Sbjct: 94  GGFAPCFLGCFLPLVGILNGMSAQDNWAKLKRDYPDALITNYYLWPAVQLANFYLVPLHY 153

Query: 181 QLLYVNIFCLLDSCFLSWIEQQ 202
           +L  V    ++ + +LSW   Q
Sbjct: 154 RLAVVQCVAIVWNSYLSWKAHQ 175

Involved in mitochondria homeostasis. May be involved in the metabolism of reactive oxygen species and control of oxidative phosphorylation and mitochondrial DNA (mtDNA) maintenance.

Mus musculus (taxid: 10090)

>sp|Q2KIN6|MPV17_BOVIN Protein Mpv17 OS=Bos taurus GN=MPV17 PE=2 SV=1

 Score = 88.6 bits (218), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 64/198 (32%), Positives = 90/198 (45%), Gaps = 28/198 (14%)

Query: 2   LRLWKWYQNCLAVHPVKTQVVSSGLIWGFGDVAAQSITHLTAQNRLHNQNEKSTEDTGNG 61
           + LW+ YQ  L  HP K QV+++G + G GDV +Q +       R   Q  ++       
Sbjct: 1   MALWRAYQRALTAHPWKVQVLTAGSLMGLGDVISQQLV-----ERRGLQAHQA------- 48

Query: 62  NNELKLNWNRVAKTSFFGFAFVGPVGHFWYEGLDRFIRNRFLMQPNSPRFVA-TKVAIDG 120
                    R    +  G  FVGPV   WY  LDR I       P + +  A  K+ +D 
Sbjct: 49  --------GRTLTMASLGCGFVGPVVGGWYRVLDRLI-------PGTTKVDALKKMLLDQ 93

Query: 121 GLFGPLDLLVFFSYMGFAAGKSFPQVKEDVKRDFLPALILEGGLWPLLQVANFRFVPVPY 180
           G F P  L  F   +G   G S       ++RDF  ALI    LWP +Q+ANF  VP+ Y
Sbjct: 94  GGFAPCFLGCFLPLVGTLNGLSAQDNWAKLQRDFPDALITNYYLWPAVQLANFYLVPLHY 153

Query: 181 QLLYVNIFCLLDSCFLSW 198
           +L  V    ++ + +LSW
Sbjct: 154 RLAVVQCVAVIWNSYLSW 171

Involved in mitochondria homeostasis. May be involved in the metabolism of reactive oxygen species and control of oxidative phosphorylation and mitochondrial DNA (mtDNA) maintenance.

Bos taurus (taxid: 9913)

>sp|Q2TXA2|SYM1_ASPOR Protein sym1 OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) GN=sym1 PE=3 SV=1

 Score = 85.9 bits (211), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 61/200 (30%), Positives = 92/200 (46%), Gaps = 28/200 (14%)

Query: 4   LWKWYQNCLAVHPVKTQVVSSGLIWGFGDVAAQSITHLTAQNRLHNQNEKSTEDTGNGNN 63
           +++WYQ  LA  P+ T  V+S +++G GDV AQ +            + K  E       
Sbjct: 1   MFRWYQAKLAKQPILTASVTSAVLFGSGDVLAQQVV-----------DRKGLE------- 42

Query: 64  ELKLNWNRVAKTSFFGFAFVGPVGHFWYEGLDRFIRNRFLMQPNSPRFVATKVAIDGGLF 123
             K ++ R  + + +G A  GP    W+  L R +     +  NS   +  +VA D  LF
Sbjct: 43  --KHDFARTGRMALYGGAIFGPAATTWFGFLQRNV-----VLKNSKATIVARVAADQCLF 95

Query: 124 GPLDLLVFFSYMGFAAGKSFPQVKEDVKRDFLPALILEGGLWPLLQVANFRFVPVPYQLL 183
            P  L  F + M    G S P   E  +  FLP+      +WPL+Q  NF  VP+ Y++L
Sbjct: 96  TPTHLTCFLTSMAIMEG-SDP--IEKWRNSFLPSYKANLTIWPLVQGVNFSIVPLEYRVL 152

Query: 184 YVNIFCLLDSCFLSWIEQQE 203
            VN+  L  +C LS I   +
Sbjct: 153 VVNLVSLGWNCLLSMINSGD 172

May be involved in cellular response to stress. Required to maintain mitochondrial DNA (mtDNA) integrity and stability.

Aspergillus oryzae (strain ATCC 42149 / RIB 40) (taxid: 510516)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	225
356552626	210	PREDICTED: PXMP2/4 family protein 2-like	0.933	1.0	0.743	8e-93
357436531	214	Protein Mpv17 [Medicago truncatula] gi|3	0.951	1.0	0.729	9e-92
225430031	218	PREDICTED: protein Mpv17 [Vitis vinifera	0.96	0.990	0.724	2e-91
147812172	218	hypothetical protein VITISV_033965 [Viti	0.96	0.990	0.72	2e-91
224141793	216	predicted protein [Populus trichocarpa]	0.96	1.0	0.72	3e-91
217071252	214	unknown [Medicago truncatula]	0.951	1.0	0.729	3e-91
388510536	209	unknown [Lotus japonicus]	0.928	1.0	0.706	8e-88
224143550	232	predicted protein [Populus trichocarpa]	0.991	0.961	0.670	2e-85
297835548	225	hypothetical protein ARALYDRAFT_479971 [	0.991	0.991	0.668	2e-83
110737868	235	hypothetical protein [Arabidopsis thalia	1.0	0.957	0.645	4e-83

>gi|356552626|ref|XP_003544665.1| PREDICTED: PXMP2/4 family protein 2-like isoform 1 [Glycine max]

 Score =  345 bits (885), Expect = 8e-93,   Method: Compositional matrix adjust.
 Identities = 162/218 (74%), Positives = 187/218 (85%), Gaps = 8/218 (3%)

Query: 1   MLRLWKWYQNCLAVHPVKTQVVSSGLIWGFGDVAAQSITHLTAQNRLHNQNEKSTEDTGN 60
           MLRLWKWYQNCLAVHPVKTQV+SSGLIWG GD+AAQ++TH TA+ R+       T D  +
Sbjct: 1   MLRLWKWYQNCLAVHPVKTQVISSGLIWGAGDIAAQAVTHYTAKKRV-------TFD-AD 52

Query: 61  GNNELKLNWNRVAKTSFFGFAFVGPVGHFWYEGLDRFIRNRFLMQPNSPRFVATKVAIDG 120
              E K+NW RV+ TS FG  FVGPVGHFWYEGLDRFIR + +++PNS RFVATKVA+DG
Sbjct: 53  DTKEFKINWRRVSTTSLFGLGFVGPVGHFWYEGLDRFIRLKLMLKPNSFRFVATKVAVDG 112

Query: 121 GLFGPLDLLVFFSYMGFAAGKSFPQVKEDVKRDFLPALILEGGLWPLLQVANFRFVPVPY 180
            +FGPLDLLVFF+YMGF+AGKS PQVKEDVKRDFLPA +LEGG+WP++QVANFRF+PV Y
Sbjct: 113 FIFGPLDLLVFFTYMGFSAGKSVPQVKEDVKRDFLPAFVLEGGIWPIVQVANFRFIPVRY 172

Query: 181 QLLYVNIFCLLDSCFLSWIEQQEDAPWKQWIKSFLPSK 218
           QLLYVN FCLLDSCFLSW+EQQ+DAPWKQW+KSFLP K
Sbjct: 173 QLLYVNFFCLLDSCFLSWVEQQQDAPWKQWLKSFLPMK 210

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357436531|ref|XP_003588541.1| Protein Mpv17 [Medicago truncatula] gi|355477589|gb|AES58792.1| Protein Mpv17 [Medicago truncatula] gi|388512265|gb|AFK44194.1| unknown [Medicago truncatula]

 Score =  342 bits (876), Expect = 9e-92,   Method: Compositional matrix adjust.
 Identities = 159/218 (72%), Positives = 183/218 (83%), Gaps = 4/218 (1%)

Query: 1   MLRLWKWYQNCLAVHPVKTQVVSSGLIWGFGDVAAQSITHLTAQNRLHNQNEKSTEDTGN 60
           ML+LW+WYQNCLAVHPVKTQV+SSG IWG GDVAAQ +TH TA+ R       S +D   
Sbjct: 1   MLKLWRWYQNCLAVHPVKTQVISSGFIWGAGDVAAQYVTHYTAKTRGVTNESHSQDD--- 57

Query: 61  GNNELKLNWNRVAKTSFFGFAFVGPVGHFWYEGLDRFIRNRFLMQPNSPRFVATKVAIDG 120
              E K+NW RV+ TS FG AFVGPVGH+WYEGLD+FIR+R L++PNS RFVA KV  DG
Sbjct: 58  -KKEFKINWKRVSTTSLFGLAFVGPVGHYWYEGLDKFIRHRLLLKPNSFRFVAAKVGADG 116

Query: 121 GLFGPLDLLVFFSYMGFAAGKSFPQVKEDVKRDFLPALILEGGLWPLLQVANFRFVPVPY 180
            LFGPLDLLVFF+YMGF+ GKS PQ+KEDVKRDFLPALILEGG+WP++QVANFR+VPV Y
Sbjct: 117 FLFGPLDLLVFFTYMGFSTGKSVPQIKEDVKRDFLPALILEGGIWPVVQVANFRYVPVRY 176

Query: 181 QLLYVNIFCLLDSCFLSWIEQQEDAPWKQWIKSFLPSK 218
           QLLYVN FCLLDSCFLSW+EQQ+DAPWK+W+KSFLP K
Sbjct: 177 QLLYVNFFCLLDSCFLSWVEQQQDAPWKEWVKSFLPLK 214

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225430031|ref|XP_002284227.1| PREDICTED: protein Mpv17 [Vitis vinifera] gi|296081890|emb|CBI20895.3| unnamed protein product [Vitis vinifera]

 Score =  341 bits (874), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 163/225 (72%), Positives = 185/225 (82%), Gaps = 9/225 (4%)

Query: 1   MLRLWKWYQNCLAVHPVKTQVVSSGLIWGFGDVAAQSITHLTAQNRLHNQNEKSTEDTGN 60
           +LRLWKWYQ+CLAVHPVKTQ++SSGLIWGFGD+ AQ+ITH TA+   H+Q        G+
Sbjct: 3   LLRLWKWYQDCLAVHPVKTQIISSGLIWGFGDICAQTITHTTAKR--HHQ-------IGD 53

Query: 61  GNNELKLNWNRVAKTSFFGFAFVGPVGHFWYEGLDRFIRNRFLMQPNSPRFVATKVAIDG 120
            + ELK+NW RVA TS FGF FVGPVGHFWYEGLDR IR+R  +QP S RFVA KVAIDG
Sbjct: 54  EDKELKINWRRVATTSLFGFGFVGPVGHFWYEGLDRLIRHRLQLQPKSFRFVAAKVAIDG 113

Query: 121 GLFGPLDLLVFFSYMGFAAGKSFPQVKEDVKRDFLPALILEGGLWPLLQVANFRFVPVPY 180
            +FGPLDLLVFFSYMGF+ GKS  QVKEDVKRDFLPALILEGG+WP++QV NFRF+PV Y
Sbjct: 114 IIFGPLDLLVFFSYMGFSTGKSVAQVKEDVKRDFLPALILEGGIWPIVQVVNFRFIPVRY 173

Query: 181 QLLYVNIFCLLDSCFLSWIEQQEDAPWKQWIKSFLPSKGKKGHDG 225
           QLLYVN FCLLDS FLSW+EQQ+DAPWKQW  SFL  K K+G  G
Sbjct: 174 QLLYVNFFCLLDSSFLSWVEQQQDAPWKQWFTSFLALKEKEGQGG 218

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147812172|emb|CAN61516.1| hypothetical protein VITISV_033965 [Vitis vinifera]

 Score =  340 bits (873), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 162/225 (72%), Positives = 182/225 (80%), Gaps = 9/225 (4%)

Query: 1   MLRLWKWYQNCLAVHPVKTQVVSSGLIWGFGDVAAQSITHLTAQNRLHNQNEKSTEDTGN 60
           +LRLWKWYQ+CLAVHPVKTQ++SSGLIWGFGD+ AQ+ITH TA         K     G+
Sbjct: 3   LLRLWKWYQDCLAVHPVKTQIISSGLIWGFGDICAQTITHTTA---------KRXHQIGD 53

Query: 61  GNNELKLNWNRVAKTSFFGFAFVGPVGHFWYEGLDRFIRNRFLMQPNSPRFVATKVAIDG 120
            + ELK+NW RVA TS FGF FVGPVGHFWYEGLDR IR+R  +QP S RFVA KVAIDG
Sbjct: 54  EDKELKINWRRVATTSLFGFGFVGPVGHFWYEGLDRLIRHRLQLQPKSFRFVAAKVAIDG 113

Query: 121 GLFGPLDLLVFFSYMGFAAGKSFPQVKEDVKRDFLPALILEGGLWPLLQVANFRFVPVPY 180
            +FGPLDLLVFFSYMGF+ GKS  QVKEDVKRDFLPALILEGG+WP++QV NFRF+PV Y
Sbjct: 114 IIFGPLDLLVFFSYMGFSTGKSVAQVKEDVKRDFLPALILEGGIWPIVQVVNFRFIPVRY 173

Query: 181 QLLYVNIFCLLDSCFLSWIEQQEDAPWKQWIKSFLPSKGKKGHDG 225
           QLLYVN FCLLDS FLSW+EQQ+DAPWKQW  SFL  K K+G  G
Sbjct: 174 QLLYVNFFCLLDSSFLSWVEQQQDAPWKQWFTSFLALKEKEGQGG 218

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224141793|ref|XP_002324248.1| predicted protein [Populus trichocarpa] gi|222865682|gb|EEF02813.1| predicted protein [Populus trichocarpa]

 Score =  340 bits (871), Expect = 3e-91,   Method: Compositional matrix adjust.
 Identities = 162/225 (72%), Positives = 185/225 (82%), Gaps = 9/225 (4%)

Query: 1   MLRLWKWYQNCLAVHPVKTQVVSSGLIWGFGDVAAQSITHLTAQNRLHNQNEKSTEDTGN 60
           ML+LWKWYQNCLAVHPVKTQ++SSG+IWGFGD+AAQSITH TA+     + E+       
Sbjct: 1   MLKLWKWYQNCLAVHPVKTQMISSGVIWGFGDIAAQSITHYTAKKYRQIKVEE------- 53

Query: 61  GNNELKLNWNRVAKTSFFGFAFVGPVGHFWYEGLDRFIRNRFLMQPNSPRFVATKVAIDG 120
              ELK+NW RV  TS FGFAFVGPVGHFWYE LDRFIR+R L++PNS RFV  KVA+DG
Sbjct: 54  --KELKINWKRVTTTSLFGFAFVGPVGHFWYESLDRFIRSRLLLRPNSLRFVGAKVALDG 111

Query: 121 GLFGPLDLLVFFSYMGFAAGKSFPQVKEDVKRDFLPALILEGGLWPLLQVANFRFVPVPY 180
            +FGPLDLLVFFSYMGFA+GKS PQ+KED+KRDF+PALILEGG+WP++QV NFRFVPV Y
Sbjct: 112 IIFGPLDLLVFFSYMGFASGKSVPQIKEDLKRDFVPALILEGGIWPIVQVGNFRFVPVRY 171

Query: 181 QLLYVNIFCLLDSCFLSWIEQQEDAPWKQWIKSFLPSKGKKGHDG 225
           QLLYVN FCLLDSCFLSW+EQQEDAPWKQ + S L  K KK   G
Sbjct: 172 QLLYVNFFCLLDSCFLSWLEQQEDAPWKQRLISLLSGKEKKDKGG 216

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|217071252|gb|ACJ83986.1| unknown [Medicago truncatula]

 Score =  340 bits (871), Expect = 3e-91,   Method: Compositional matrix adjust.
 Identities = 159/218 (72%), Positives = 182/218 (83%), Gaps = 4/218 (1%)

Query: 1   MLRLWKWYQNCLAVHPVKTQVVSSGLIWGFGDVAAQSITHLTAQNRLHNQNEKSTEDTGN 60
           ML+LW+WYQNCLAVHPVKTQV+SSG IWG GDVAAQ +TH TA+ R       S +D   
Sbjct: 1   MLKLWRWYQNCLAVHPVKTQVISSGFIWGAGDVAAQYVTHYTAKTRGVTNESHSQDD--- 57

Query: 61  GNNELKLNWNRVAKTSFFGFAFVGPVGHFWYEGLDRFIRNRFLMQPNSPRFVATKVAIDG 120
              E K+NW RV+ TS FG AFVGPVGH+WYEGLD+FIR+R L++PNS RFVA KV  DG
Sbjct: 58  -KKEFKINWKRVSTTSLFGLAFVGPVGHYWYEGLDKFIRHRLLLKPNSFRFVAAKVGADG 116

Query: 121 GLFGPLDLLVFFSYMGFAAGKSFPQVKEDVKRDFLPALILEGGLWPLLQVANFRFVPVPY 180
            LFGPLDLLVFF+YMGF+AGKS PQ+KEDVKRDFLPALILEGG+WP+ QVANFR+VPV Y
Sbjct: 117 FLFGPLDLLVFFTYMGFSAGKSVPQIKEDVKRDFLPALILEGGIWPVGQVANFRYVPVRY 176

Query: 181 QLLYVNIFCLLDSCFLSWIEQQEDAPWKQWIKSFLPSK 218
           QLLY N FCLLDSCFLSW+EQQ+DAPWK+W+KSFLP K
Sbjct: 177 QLLYANFFCLLDSCFLSWVEQQQDAPWKEWVKSFLPLK 214

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388510536|gb|AFK43334.1| unknown [Lotus japonicus]

 Score =  328 bits (842), Expect = 8e-88,   Method: Compositional matrix adjust.
 Identities = 154/218 (70%), Positives = 181/218 (83%), Gaps = 9/218 (4%)

Query: 1   MLRLWKWYQNCLAVHPVKTQVVSSGLIWGFGDVAAQSITHLTAQNRLHNQNEKSTEDTGN 60
           ML+LW+WYQNCLAVHPVKTQV+SSGLIWG GD+AAQ++T+ TA+ R       +TED   
Sbjct: 1   MLKLWRWYQNCLAVHPVKTQVISSGLIWGAGDIAAQAVTNYTAKTR------SATEDD-- 52

Query: 61  GNNELKLNWNRVAKTSFFGFAFVGPVGHFWYEGLDRFIRNRFLMQPNSPRFVATKVAIDG 120
            N E ++NW RV+ TS FG AFVGPVGH+WYEGLDRFIR R +++PNS RFVA KV  DG
Sbjct: 53  -NREFRINWKRVSTTSLFGLAFVGPVGHYWYEGLDRFIRLRLMLKPNSFRFVAAKVGADG 111

Query: 121 GLFGPLDLLVFFSYMGFAAGKSFPQVKEDVKRDFLPALILEGGLWPLLQVANFRFVPVPY 180
            LFGPLDLLVFF+YMGF+ GKS PQ+KEDVKRDF PALILEGG+WP++QVANFR++PV Y
Sbjct: 112 FLFGPLDLLVFFTYMGFSTGKSVPQIKEDVKRDFFPALILEGGIWPVVQVANFRYIPVRY 171

Query: 181 QLLYVNIFCLLDSCFLSWIEQQEDAPWKQWIKSFLPSK 218
           Q LYVN FCLL SCFLSW+EQQ+DAPWK W+KS LP K
Sbjct: 172 QPLYVNFFCLLGSCFLSWVEQQQDAPWKAWVKSILPLK 209

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224143550|ref|XP_002324994.1| predicted protein [Populus trichocarpa] gi|222866428|gb|EEF03559.1| predicted protein [Populus trichocarpa]

 Score =  320 bits (820), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 155/231 (67%), Positives = 176/231 (76%), Gaps = 8/231 (3%)

Query: 1   MLRLWKWYQNCLAVHPVKTQVVSSGLIWGFGDVAAQSITHLTAQNRL-HNQNEKSTED-- 57
           ML+ WKWYQ+CL+ HPVKTQ+VSSG +WG GD+ AQ ITH TA + L  +       D  
Sbjct: 1   MLKAWKWYQHCLSSHPVKTQIVSSGTLWGIGDIGAQYITHSTATSLLPKSVTSLRIGDLL 60

Query: 58  -----TGNGNNELKLNWNRVAKTSFFGFAFVGPVGHFWYEGLDRFIRNRFLMQPNSPRFV 112
                  N   E K+NW RVA TS FGF FVGPVGHFWYEGLDRFIR RFL+QP SPRFV
Sbjct: 61  LVIYFKNNEGAEFKINWKRVAITSMFGFGFVGPVGHFWYEGLDRFIRLRFLLQPKSPRFV 120

Query: 113 ATKVAIDGGLFGPLDLLVFFSYMGFAAGKSFPQVKEDVKRDFLPALILEGGLWPLLQVAN 172
           ATKVA DG +FGP DL VFF+YMGF+ GK+  QVKEDVKRDFLPALILEGG+WP+ QV N
Sbjct: 121 ATKVAADGIIFGPFDLFVFFTYMGFSTGKNVAQVKEDVKRDFLPALILEGGVWPIFQVVN 180

Query: 173 FRFVPVPYQLLYVNIFCLLDSCFLSWIEQQEDAPWKQWIKSFLPSKGKKGH 223
           FR+VPV YQLLYVN+FCL+DS FLSWIEQQ+DAPWKQW  SF P K + G 
Sbjct: 181 FRYVPVRYQLLYVNVFCLIDSAFLSWIEQQKDAPWKQWFTSFQPLKERGGE 231

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297835548|ref|XP_002885656.1| hypothetical protein ARALYDRAFT_479971 [Arabidopsis lyrata subsp. lyrata] gi|297331496|gb|EFH61915.1| hypothetical protein ARALYDRAFT_479971 [Arabidopsis lyrata subsp. lyrata]

 Score =  314 bits (805), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 151/226 (66%), Positives = 175/226 (77%), Gaps = 3/226 (1%)

Query: 1   MLRLWKWYQNCLAVHPVKTQVVSSGLIWGFGDVAAQSITHLTAQNRLHNQNEKSTEDTGN 60
           ML+LW+WYQ CL VHPVKTQV+SSG +WGFGDV AQ ITH TA+ RL    E  T    +
Sbjct: 1   MLKLWRWYQRCLTVHPVKTQVISSGFLWGFGDVTAQYITHSTAKPRLLRLTE--TNKDAD 58

Query: 61  GNNELKLNWNRVAKTSFFGFAFVGPVGHFWYEGLDRFIRNRFLMQPNSPRFVATKVAIDG 120
            + E K+NW RVA TS FGF FVGPVGHFWYEGLD+FI+ +    P S RFVA KVA+DG
Sbjct: 59  ADAEFKVNWKRVAITSMFGFGFVGPVGHFWYEGLDKFIKLKLRYVPKSTRFVAAKVAMDG 118

Query: 121 GLFGPLDLLVFFSYMGFAAGKSFPQVKEDVKRDFLPALILEGGLWPLLQVANFRFVPVPY 180
            +FGP+DLLVFF+YMGFA GK+  +VKE +KRDFLPAL LEGG WPLLQ+ANFR+VPV Y
Sbjct: 119 LIFGPIDLLVFFTYMGFATGKNTAEVKEGLKRDFLPALALEGGAWPLLQIANFRYVPVQY 178

Query: 181 QLLYVNIFCLLDSCFLSWIEQQEDAPWKQW-IKSFLPSKGKKGHDG 225
           QLLYVNIFCL+DS FLSW+EQQ+DA WKQW   SF P K + G  G
Sbjct: 179 QLLYVNIFCLVDSAFLSWVEQQKDAAWKQWFTSSFQPLKERGGQGG 224

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|110737868|dbj|BAF00872.1| hypothetical protein [Arabidopsis thaliana]

 Score =  313 bits (802), Expect = 4e-83,   Method: Compositional matrix adjust.
 Identities = 151/234 (64%), Positives = 176/234 (75%), Gaps = 9/234 (3%)

Query: 1   MLRLWKWYQNCLAVHPVKTQVVSSGLIWGFGDVAAQSITHLTAQNRLHNQNEKSTEDTGN 60
           ML+LW+WYQ CL VHPVKTQV+SSG +WGFGDV AQ ITH TA+ RL    E + +   +
Sbjct: 1   MLKLWRWYQRCLTVHPVKTQVISSGFLWGFGDVTAQYITHSTAKRRLLRLTETNKDADAD 60

Query: 61  G--------NNELKLNWNRVAKTSFFGFAFVGPVGHFWYEGLDRFIRNRFLMQPNSPRFV 112
                    + E K+NW RVA TS FGF FVGPVGHFWYEGLDRFI+ +    P S RFV
Sbjct: 61  AEIKVKWKQDAEFKVNWKRVAITSMFGFGFVGPVGHFWYEGLDRFIKLKLRYVPKSTRFV 120

Query: 113 ATKVAIDGGLFGPLDLLVFFSYMGFAAGKSFPQVKEDVKRDFLPALILEGGLWPLLQVAN 172
           A KVA+DG +FGP+DLLVFF+YMGFA GK+  +VKE +KRDFLPAL LEGG WPLLQ+AN
Sbjct: 121 AAKVAMDGLIFGPVDLLVFFTYMGFATGKNTAEVKEGLKRDFLPALALEGGAWPLLQIAN 180

Query: 173 FRFVPVPYQLLYVNIFCLLDSCFLSWIEQQEDAPWKQW-IKSFLPSKGKKGHDG 225
           FR+VPV YQLLYVNIFCL+DS FLSW+EQQ+DA WKQW   SF P K + G  G
Sbjct: 181 FRYVPVQYQLLYVNIFCLVDSAFLSWVEQQKDAAWKQWFTSSFQPLKERGGQGG 234

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	225
TAIR|locus:2091767	235	AT3G24570 "AT3G24570" [Arabido	1.0	0.957	0.641	7.6e-80
ZFIN|ZDB-GENE-040426-1168	177	mpv17 "MpV17 transgene, murine	0.555	0.706	0.328	1.2e-21
UNIPROTKB|J9P9X6	176	MPV17 "Uncharacterized protein	0.537	0.687	0.348	2e-21
UNIPROTKB|P39210	176	MPV17 "Protein Mpv17" [Homo sa	0.502	0.642	0.371	2e-21
RGD|1310512	176	Mpv17 "MpV17 mitochondrial inn	0.555	0.710	0.345	6.6e-21
UNIPROTKB|Q5BK62	176	Mpv17 "Protein Mpv17" [Rattus	0.555	0.710	0.345	6.6e-21
UNIPROTKB|Q2KIN6	176	MPV17 "Protein Mpv17" [Bos tau	0.537	0.687	0.356	8.4e-21
MGI|MGI:97138	176	Mpv17 "MpV17 mitochondrial inn	0.52	0.664	0.36	8.4e-21
SGD|S000004241	197	SYM1 "Protein required for eth	0.56	0.639	0.296	3.1e-19
UNIPROTKB|B5MCF8	171	MPV17 "Protein Mpv17" [Homo sa	0.426	0.561	0.384	8.1e-19

TAIR|locus:2091767 AT3G24570 "AT3G24570" [Arabidopsis thaliana (taxid:3702)]

 Score = 802 (287.4 bits), Expect = 7.6e-80, P = 7.6e-80
 Identities = 150/234 (64%), Positives = 176/234 (75%)

Query:     1 MLRLWKWYQNCLAVHPVKTQVVSSGLIWGFGDVAAQSITHLTAQNRLHNQNEKSTEDTGN 60
             ML+LW+WYQ CL VHPVKTQV+SSG +WGFGDV AQ ITH TA+ RL    E + +   +
Sbjct:     1 MLKLWRWYQRCLTVHPVKTQVISSGFLWGFGDVTAQYITHSTAKRRLLRLTETNKDADAD 60

Query:    61 G--------NNELKLNWNRVAKTSFFGFAFVGPVGHFWYEGLDRFIRNRFLMQPNSPRFV 112
                      + E K+NW RVA TS FGF FVGPVGHFWYEGLD+FI+ +    P S RFV
Sbjct:    61 AEIKVKWKQDAEFKVNWKRVAITSMFGFGFVGPVGHFWYEGLDKFIKLKLRYVPKSTRFV 120

Query:   113 ATKVAIDGGLFGPLDLLVFFSYMGFAAGKSFPQVKEDVKRDFLPALILEGGLWPLLQVAN 172
             A KVA+DG +FGP+DLLVFF+YMGFA GK+  +VKE +KRDFLPAL LEGG WPLLQ+AN
Sbjct:   121 AAKVAMDGLIFGPVDLLVFFTYMGFATGKNTAEVKEGLKRDFLPALALEGGAWPLLQIAN 180

Query:   173 FRFVPVPYQLLYVNIFCLLDSCFLSWIEQQEDAPWKQWI-KSFLPSKGKKGHDG 225
             FR+VPV YQLLYVNIFCL+DS FLSW+EQQ+DA WKQW   SF P K + G  G
Sbjct:   181 FRYVPVQYQLLYVNIFCLVDSAFLSWVEQQKDAAWKQWFTSSFQPLKERGGQGG 234

GO:0003674 "molecular_function" evidence=ND

GO:0005739 "mitochondrion" evidence=ISM

GO:0005778 "peroxisomal membrane" evidence=ISS

GO:0008150 "biological_process" evidence=ND

GO:0016021 "integral to membrane" evidence=IEA

ZFIN|ZDB-GENE-040426-1168 mpv17 "MpV17 transgene, murine homolog, glomerulosclerosis" [Danio rerio (taxid:7955)]

 Score = 172 (65.6 bits), Expect = 1.2e-21, Sum P(2) = 1.2e-21
 Identities = 43/131 (32%), Positives = 64/131 (48%)

Query:    68 NWNRVAKTSFFGFAFVGPVGHFWYEGLDRFIRNRFLMQPNSPRFVATKVAIDGGLFGPLD 127
             N  R AK    GF FVGPV   WY+ LD+ +         +      K+ +D   F P  
Sbjct:    48 NARRTAKMMSIGFFFVGPVVGGWYKVLDKLVTG------GTKSAALKKMLVDQVGFAPCF 101

Query:   128 LLVFFSYMGFAAGKSFPQVKEDVKRDFLPALILEGGLWPLLQVANFRFVPVPYQLLYVNI 187
             L  F    G   G +  +    ++RD+  ALI    LWP +Q+ANF F+P+ ++L  V I
Sbjct:   102 LGAFLGITGTLNGLTVEENVAKLQRDYTDALISNYYLWPPVQIANFYFIPLHHRLAVVQI 161

Query:   188 FCLLDSCFLSW 198
               ++ + +LSW
Sbjct:   162 VAVVWNSYLSW 172

GO:0016021 "integral to membrane" evidence=IEA

GO:0003674 "molecular_function" evidence=ND

GO:0016020 "membrane" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0005743 "mitochondrial inner membrane" evidence=IEA

UNIPROTKB|J9P9X6 MPV17 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 168 (64.2 bits), Expect = 2.0e-21, Sum P(2) = 2.0e-21
 Identities = 45/129 (34%), Positives = 63/129 (48%)

Query:    71 RVAKTSFFGFAFVGPVGHFWYEGLDRFIRNRFLMQPNSPRFVATK-VAIDGGLFGPLDLL 129
             R    +F G  FVGPV   WY  LDR I       P + +  A K + +D G F P  L 
Sbjct:    50 RTLTMAFLGCGFVGPVVGGWYRVLDRLI-------PGTAKADALKKMLLDQGGFAPCFLG 102

Query:   130 VFFSYMGFAAGKSFPQVKEDVKRDFLPALILEGGLWPLLQVANFRFVPVPYQLLYVNIFC 189
              F   +G   G S       ++RD+  AL+    LWP +Q+ANF  VP+ Y+L  V    
Sbjct:   103 CFLPLVGALNGLSAQDNWAKLRRDYPDALLTNYYLWPAVQLANFYLVPLHYRLAVVQCVA 162

Query:   190 LLDSCFLSW 198
             ++ + +LSW
Sbjct:   163 VIWNSYLSW 171

GO:0016021 "integral to membrane" evidence=IEA

UNIPROTKB|P39210 MPV17 "Protein Mpv17" [Homo sapiens (taxid:9606)]

 Score = 168 (64.2 bits), Expect = 2.0e-21, Sum P(2) = 2.0e-21
 Identities = 45/121 (37%), Positives = 62/121 (51%)

Query:    79 GFAFVGPVGHFWYEGLDRFIRNRFLMQPNSPRFVATK-VAIDGGLFGPLDLLVFFSYMGF 137
             G  FVGPV   WY+ LDRFI       P + +  A K + +D G F P  L  F   +G 
Sbjct:    58 GCGFVGPVVGGWYKVLDRFI-------PGTTKVDALKKMLLDQGGFAPCFLGCFLPLVGA 110

Query:   138 AAGKSFPQVKEDVKRDFLPALILEGGLWPLLQVANFRFVPVPYQLLYVNIFCLLDSCFLS 197
               G S       ++RD+  ALI    LWP +Q+ANF  VP+ Y+L  V    ++ + +LS
Sbjct:   111 LNGLSAQDNWAKLQRDYPDALITNYYLWPAVQLANFYLVPLHYRLAVVQCVAVIWNSYLS 170

Query:   198 W 198
             W
Sbjct:   171 W 171

GO:0016021 "integral to membrane" evidence=IEA

GO:0072593 "reactive oxygen species metabolic process" evidence=IEA

GO:0000002 "mitochondrial genome maintenance" evidence=IMP

GO:0005743 "mitochondrial inner membrane" evidence=IDA

GO:0003674 "molecular_function" evidence=ND

GO:0042592 "homeostatic process" evidence=IMP

GO:0032836 "glomerular basement membrane development" evidence=ISS

GO:0034614 "cellular response to reactive oxygen species" evidence=ISS

GO:0048839 "inner ear development" evidence=ISS

GO:2000377 "regulation of reactive oxygen species metabolic process" evidence=ISS

GO:0005777 "peroxisome" evidence=NAS;IDA

GO:0005739 "mitochondrion" evidence=IDA

RGD|1310512 Mpv17 "MpV17 mitochondrial inner membrane protein" [Rattus norvegicus (taxid:10116)]

 Score = 163 (62.4 bits), Expect = 6.6e-21, Sum P(2) = 6.6e-21
 Identities = 46/133 (34%), Positives = 62/133 (46%)

Query:    71 RVAKTSFFGFAFVGPVGHFWYEGLDRFIRNRFLMQPNSPRFVATK-VAIDGGLFGPLDLL 129
             R    +  G  FVGPV   WY  LD  I       P + +  A K + +D G F P  L 
Sbjct:    50 RTLTMASLGCGFVGPVVGGWYRVLDHLI-------PGTTKVNALKKMLLDQGGFAPCFLG 102

Query:   130 VFFSYMGFAAGKSFPQVKEDVKRDFLPALILEGGLWPLLQVANFRFVPVPYQLLYVNIFC 189
              F   +G   G S       +KRD+  ALI    LWP +Q+ANF  VP+ Y+L  V    
Sbjct:   103 CFLPLVGVLNGMSAQDNWAKLKRDYPDALITNYYLWPAVQLANFYLVPLHYRLAVVQCVA 162

Query:   190 LLDSCFLSWIEQQ 202
             ++ + +LSW   Q
Sbjct:   163 VVWNSYLSWKAHQ 175

GO:0000002 "mitochondrial genome maintenance" evidence=IEA;ISO

GO:0005739 "mitochondrion" evidence=ISO

GO:0005743 "mitochondrial inner membrane" evidence=IEA;ISO

GO:0005777 "peroxisome" evidence=IEA;ISO

GO:0007605 "sensory perception of sound" evidence=ISO

GO:0016021 "integral to membrane" evidence=IEA

GO:0032836 "glomerular basement membrane development" evidence=IEA;ISO

GO:0034614 "cellular response to reactive oxygen species" evidence=IEA;ISO

GO:0042592 "homeostatic process" evidence=IEA;ISO

GO:0048839 "inner ear development" evidence=IEA;ISO

GO:0072593 "reactive oxygen species metabolic process" evidence=IEA;ISO

GO:2000377 "regulation of reactive oxygen species metabolic process" evidence=IEA;ISO

UNIPROTKB|Q5BK62 Mpv17 "Protein Mpv17" [Rattus norvegicus (taxid:10116)]

 Score = 163 (62.4 bits), Expect = 6.6e-21, Sum P(2) = 6.6e-21
 Identities = 46/133 (34%), Positives = 62/133 (46%)

Query:    71 RVAKTSFFGFAFVGPVGHFWYEGLDRFIRNRFLMQPNSPRFVATK-VAIDGGLFGPLDLL 129
             R    +  G  FVGPV   WY  LD  I       P + +  A K + +D G F P  L 
Sbjct:    50 RTLTMASLGCGFVGPVVGGWYRVLDHLI-------PGTTKVNALKKMLLDQGGFAPCFLG 102

Query:   130 VFFSYMGFAAGKSFPQVKEDVKRDFLPALILEGGLWPLLQVANFRFVPVPYQLLYVNIFC 189
              F   +G   G S       +KRD+  ALI    LWP +Q+ANF  VP+ Y+L  V    
Sbjct:   103 CFLPLVGVLNGMSAQDNWAKLKRDYPDALITNYYLWPAVQLANFYLVPLHYRLAVVQCVA 162

Query:   190 LLDSCFLSWIEQQ 202
             ++ + +LSW   Q
Sbjct:   163 VVWNSYLSWKAHQ 175

GO:0000002 "mitochondrial genome maintenance" evidence=IEA

GO:0005777 "peroxisome" evidence=IEA

GO:0032836 "glomerular basement membrane development" evidence=IEA

GO:0034614 "cellular response to reactive oxygen species" evidence=IEA

GO:0042592 "homeostatic process" evidence=IEA

GO:0048839 "inner ear development" evidence=IEA

GO:0072593 "reactive oxygen species metabolic process" evidence=IEA

GO:2000377 "regulation of reactive oxygen species metabolic process" evidence=IEA

UNIPROTKB|Q2KIN6 MPV17 "Protein Mpv17" [Bos taurus (taxid:9913)]

 Score = 165 (63.1 bits), Expect = 8.4e-21, Sum P(2) = 8.4e-21
 Identities = 46/129 (35%), Positives = 62/129 (48%)

Query:    71 RVAKTSFFGFAFVGPVGHFWYEGLDRFIRNRFLMQPNSPRFVATK-VAIDGGLFGPLDLL 129
             R    +  G  FVGPV   WY  LDR I       P + +  A K + +D G F P  L 
Sbjct:    50 RTLTMASLGCGFVGPVVGGWYRVLDRLI-------PGTTKVDALKKMLLDQGGFAPCFLG 102

Query:   130 VFFSYMGFAAGKSFPQVKEDVKRDFLPALILEGGLWPLLQVANFRFVPVPYQLLYVNIFC 189
              F   +G   G S       ++RDF  ALI    LWP +Q+ANF  VP+ Y+L  V    
Sbjct:   103 CFLPLVGTLNGLSAQDNWAKLQRDFPDALITNYYLWPAVQLANFYLVPLHYRLAVVQCVA 162

Query:   190 LLDSCFLSW 198
             ++ + +LSW
Sbjct:   163 VIWNSYLSW 171

GO:0005743 "mitochondrial inner membrane" evidence=IEA

GO:2000377 "regulation of reactive oxygen species metabolic process" evidence=IEA

GO:0072593 "reactive oxygen species metabolic process" evidence=IEA

GO:0048839 "inner ear development" evidence=IEA

GO:0042592 "homeostatic process" evidence=IEA

GO:0034614 "cellular response to reactive oxygen species" evidence=IEA

GO:0032836 "glomerular basement membrane development" evidence=IEA

GO:0005777 "peroxisome" evidence=IEA

GO:0000002 "mitochondrial genome maintenance" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

MGI|MGI:97138 Mpv17 "MpV17 mitochondrial inner membrane protein" [Mus musculus (taxid:10090)]

 Score = 165 (63.1 bits), Expect = 8.4e-21, Sum P(2) = 8.4e-21
 Identities = 45/125 (36%), Positives = 61/125 (48%)

Query:    79 GFAFVGPVGHFWYEGLDRFIRNRFLMQPNSPRFVATK-VAIDGGLFGPLDLLVFFSYMGF 137
             G  FVGPV   WY+ LD  I       P + +  A K + +D G F P  L  F   +G 
Sbjct:    58 GCGFVGPVVGGWYKVLDHLI-------PGTTKVHALKKMLLDQGGFAPCFLGCFLPLVGI 110

Query:   138 AAGKSFPQVKEDVKRDFLPALILEGGLWPLLQVANFRFVPVPYQLLYVNIFCLLDSCFLS 197
               G S       +KRD+  ALI    LWP +Q+ANF  VP+ Y+L  V    ++ + +LS
Sbjct:   111 LNGMSAQDNWAKLKRDYPDALITNYYLWPAVQLANFYLVPLHYRLAVVQCVAIVWNSYLS 170

Query:   198 WIEQQ 202
             W   Q
Sbjct:   171 WKAHQ 175

GO:0000002 "mitochondrial genome maintenance" evidence=ISO

GO:0005739 "mitochondrion" evidence=ISO;IDA;IMP

GO:0005743 "mitochondrial inner membrane" evidence=ISO

GO:0005777 "peroxisome" evidence=IDA

GO:0007605 "sensory perception of sound" evidence=IMP

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0032836 "glomerular basement membrane development" evidence=IMP

GO:0034614 "cellular response to reactive oxygen species" evidence=IMP

GO:0042592 "homeostatic process" evidence=ISO

GO:0048839 "inner ear development" evidence=IMP

GO:0072593 "reactive oxygen species metabolic process" evidence=IDA

GO:2000377 "regulation of reactive oxygen species metabolic process" evidence=IMP

SGD|S000004241 SYM1 "Protein required for ethanol metabolism" [Saccharomyces cerevisiae (taxid:4932)]

 Score = 182 (69.1 bits), Expect = 3.1e-19, Sum P(2) = 3.1e-19
 Identities = 40/135 (29%), Positives = 69/135 (51%)

Query:    68 NWNRVAKTSFFGFAFVGPVGHFWYEGLDRFIRNRFLMQPNSPRF----VATKVAIDGGLF 123
             ++ R A+   +G      +G  WY    + + N+  M+ N P++    +  +VA+D   F
Sbjct:    48 DYKRTARAVIYGSLIFSFIGDKWY----KILNNKIYMR-NRPQYHWSNMVLRVAVDQLAF 102

Query:   124 GPLDLLVFFSYMGFAAGKSFPQVKEDVKRDFLPALILEGGLWPLLQVANFRFVPVPYQLL 183
              PL L  +F+ M    G+SF   K  +K  + P L+    +WPL Q  NF  VP+ ++LL
Sbjct:   103 APLGLPFYFTCMSIMEGRSFDVAKLKIKEQWWPTLLTNWAVWPLFQAINFSVVPLQHRLL 162

Query:   184 YVNIFCLLDSCFLSW 198
              VN+  +  + +LS+
Sbjct:   163 AVNVVAIFWNTYLSY 177

GO:0005743 "mitochondrial inner membrane" evidence=IEA;IDA

GO:0016021 "integral to membrane" evidence=IEA;ISM

GO:0016020 "membrane" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA;IDA

GO:0006067 "ethanol metabolic process" evidence=IMP

GO:0003674 "molecular_function" evidence=ND

UNIPROTKB|B5MCF8 MPV17 "Protein Mpv17" [Homo sapiens (taxid:9606)]

 Score = 143 (55.4 bits), Expect = 8.1e-19, Sum P(2) = 8.1e-19
 Identities = 40/104 (38%), Positives = 53/104 (50%)

Query:    79 GFAFVGPVGHFWYEGLDRFIRNRFLMQPNSPRFVATK-VAIDGGLFGPLDLLVFFSYMGF 137
             G  FVGPV   WY+ LDRFI       P + +  A K + +D G F P  L  F   +G 
Sbjct:    58 GCGFVGPVVGGWYKVLDRFI-------PGTTKVDALKKMLLDQGGFAPCFLGCFLPLVGA 110

Query:   138 AAGKSFPQVKEDVKRDFLPALILEGGLWPLLQVANFRFVPVPYQ 181
               G S       ++RD+  ALI    LWP +Q+ANF  VP+ Y+
Sbjct:   111 LNGLSAQDNWAKLQRDYPDALITNYYLWPAVQLANFYLVPLHYR 154

GO:0016021 "integral to membrane" evidence=IEA

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Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

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Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	225
pfam04117	68	pfam04117, Mpv17_PMP22, Mpv17 / PMP22 family	1e-16

>gnl|CDD|202894 pfam04117, Mpv17_PMP22, Mpv17 / PMP22 family

 Score = 71.1 bits (175), Expect = 1e-16
 Identities = 26/68 (38%), Positives = 41/68 (60%)

Query: 135 MGFAAGKSFPQVKEDVKRDFLPALILEGGLWPLLQVANFRFVPVPYQLLYVNIFCLLDSC 194
           MG   GKS  ++KE +K  F P L     +WP +Q  NF FVPV Y++L+VN+  +  + 
Sbjct: 1   MGLLEGKSLEEIKEKLKEKFWPTLKANWKVWPPVQFINFAFVPVHYRVLFVNLVGIGWNT 60

Query: 195 FLSWIEQQ 202
           +LS++  +
Sbjct: 61  YLSYVNNK 68

The 22-kDa peroxisomal membrane protein (PMP22) is a major component of peroxisomal membranes. PMP22 seems to be involved in pore forming activity and may contribute to the unspecific permeability of the organelle membrane. PMP22 is synthesised on free cytosolic ribosomes and then directed to the peroxisome membrane by specific targeting information. Mpv17 is a closely related peroxisomal protein. In mouse, the Mpv17 protein is involved in the development of early-onset glomerulosclerosis. More recently a homolog of Mpv17 in S. cerevisiae has been been found to be an integral membrane protein of the inner mitochondrial membrane where it has been proposed to have a role in ethanol metabolism and tolerance during heat-shock. Defects in MPV17 is associated with mitochondrial DNA depletion syndrome (MDDS) and Navajo neurohepatopathy (NNH). MDDS is a clinically heterogeneous group of disorders characterized by a reduction in mitochondrial DNA (mtDNA) copy number. Primary mtDNA depletion is inherited as an autosomal recessive trait and may affect single organs, typically muscle or liver, or multiple tissues. Individuals with the hepatocerebral form of mitochondrial DNA depletion syndrome have early progressive liver failure and neurologic abnormalities, hypoglycemia, and increased lactate in body fluids. NNH is an autosomal recessive disease that is prevalent among Navajo children in the South Western states of America. The major clinical features are hepatopathy, peripheral neuropathy, corneal anesthesia and scarring, acral mutilation, cerebral leukoencephalopathy, failure to thrive, and recurrent metabolic acidosis with intercurrent infections. Infantile, childhood, and classic forms of NNH have been described. Mitochondrial DNA depletion was detected in the livers of patients, suggesting a primary defect in mtDNA maintenance. Length = 68

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	225
KOG1944	222	consensus Peroxisomal membrane protein MPV17 and r	100.0
PF04117	68	Mpv17_PMP22: Mpv17 / PMP22 family ; InterPro: IPR0	99.92

>KOG1944 consensus Peroxisomal membrane protein MPV17 and related proteins [General function prediction only]

Probab=100.00  E-value=7.5e-41  Score=282.03  Aligned_cols=168  Identities=35%  Similarity=0.636  Sum_probs=157.0

Q ss_pred             HhhCchHHHHHHHHHHH-HHhHHHHHhhhhhhhhhhcccCCCCCcccCCCCCCCccchHHHHHHHHHhccccchhhHHHH
Q 041783           12 LAVHPVKTQVVSSGLIW-GFGDVAAQSITHLTAQNRLHNQNEKSTEDTGNGNNELKLNWNRVAKTSFFGFAFVGPVGHFW   90 (225)
Q Consensus        12 l~~~Pl~t~~~ts~~l~-~~gD~iaQ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~R~~r~~~~G~~~~gP~~h~w   90 (225)
                      ...+|++++.++++.+. .+||+++|.++..++.                 . ...+|+.|++||+++|+++.||.+|+|
T Consensus        46 ~~~~~~l~~~i~~~~~~~~~~d~~~q~~~~~~~~-----------------~-~~~~d~~rtlr~~~~G~~f~gp~~~~W  107 (222)
T KOG1944|consen   46 FSLYPLLTKAITTSLLLAAAGDVISQSLEGRSKK-----------------L-FQTLDLTRTLRMGIFGFLFVGPTLHYW  107 (222)
T ss_pred             hhhhhHHHHHHHHHHHHHHhchhhhhhhhhhccc-----------------c-cccccHHHHHHHHhhhhheeccchhHH
Confidence            35688888888888888 9999999999987531                 0 357999999999999988999999999


Q ss_pred             HHHHHHhhhhhccCCCCChHHHHHHHHHhhhhhhhHHHHHHHHHHHhhcCCChhhHHHHHHHhhHHHHHhccccchhhhh
Q 041783           91 YEGLDRFIRNRFLMQPNSPRFVATKVAIDGGLFGPLDLLVFFSYMGFAAGKSFPQVKEDVKRDFLPALILEGGLWPLLQV  170 (225)
Q Consensus        91 y~~Ld~~~~~~~~~~~~~~~~v~~Kv~~Dq~i~~P~~~~~F~~~~~~l~G~s~~~~~~~lk~~~~~~l~~~~~~Wp~~q~  170 (225)
                      |..||+.+|      .++..++++|+++||++++|+.+.+||.+++++||++.+++.++++++++|+++++|++||++|+
T Consensus       108 y~~L~~~~p------~~~~~~~~~kvl~dql~~~P~~~~~ff~~~~~legk~~~~~~~~~~~~~~p~l~~~~~~WP~~q~  181 (222)
T KOG1944|consen  108 YRLLSKLFP------KKTLITVVKKVLLDQLVFAPLFIVVFFLLMGLLEGKTNEEAKAKLKRKFWPTLKANWMVWPLVQF  181 (222)
T ss_pred             HHHHHHHcc------CccHHHHHHHHHHhhhhhchHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHhhhheecchhhe
Confidence            999999997      57889999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hheeeecCCcchhhhhHHHHHHHHHHHHhhhCC
Q 041783          171 ANFRFVPVPYQLLYVNIFCLLDSCFLSWIEQQE  203 (225)
Q Consensus       171 inF~~VP~~~Rvlf~n~v~~~Wn~yLS~~~~~~  203 (225)
                      +||++||+++|++++|+++++||+|||+++++.
T Consensus       182 inF~~VP~~~rvl~~~~vsl~W~~~Ls~~~~~~  214 (222)
T KOG1944|consen  182 INFRLVPLQYRVLFVNIVSLVWNTYLSYKNASL  214 (222)
T ss_pred             eeeEEccccceehhhhhHHHHHHHHHHHHhhcc
Confidence            999999999999999999999999999999998

>PF04117 Mpv17_PMP22: Mpv17 / PMP22 family ; InterPro: IPR007248 The 22 kDa peroxisomal membrane protein (PMP22) is a major component of peroxisomal membranes

Probab=99.92  E-value=1.6e-25  Score=155.44  Aligned_cols=68  Identities=40%  Similarity=0.824  Sum_probs=66.4

Q ss_pred             HHhhcCCChhhHHHHHHHhhHHHHHhccccchhhhhhheeeecCCcchhhhhHHHHHHHHHHHHhhhC
Q 041783          135 MGFAAGKSFPQVKEDVKRDFLPALILEGGLWPLLQVANFRFVPVPYQLLYVNIFCLLDSCFLSWIEQQ  202 (225)
Q Consensus       135 ~~~l~G~s~~~~~~~lk~~~~~~l~~~~~~Wp~~q~inF~~VP~~~Rvlf~n~v~~~Wn~yLS~~~~~  202 (225)
                      |+++||+++++++++++++|+++++++|++|||+|++||.|||+++|++|+|+++++||+|||+++|+
T Consensus         1 Mg~l~g~s~~~~~~~l~~~~~~~~~~~~~~Wp~~~~vnF~~vP~~~Rv~~~~~v~~~W~~~LS~~~~r   68 (68)
T PF04117_consen    1 MGLLEGKSWEEIKEKLKRDYWPTLKASWKFWPPAQIVNFRYVPPHYRVLFVNVVSFFWNTYLSYIANR   68 (68)
T ss_pred             CCcccCCCHHHHHHHHHHHHHHHHHHHhHhHHHHHHHHhcccChhhhhhhhhhHHHHHHHHHHHHhcC
Confidence            67899999999999999999999999999999999999999999999999999999999999999986

PMP22 seems to be involved in pore-forming activity and may contribute to the unspecific permeability of the organelle membrane. PMP22 is synthesised on free cytosolic ribosomes and then directed to the peroxisome membrane by specific targeting information []. Mpv17 is a closely related peroxisomal protein involved in the development of early-onset glomerulosclerosis []. A member of this family found in Saccharomyces cerevisiae (Baker's yeast) is an integral membrane protein of the inner mitochondrial membrane and has been suggested to play a role in mitochondrial function during heat shock [].; GO: 0016021 integral to membrane

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00