Citrus Sinensis ID: 041791

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-
MGSSDLSMILPRVLIVSRRTVRKNKFVDFVGEYHLDLIVSYGAVPVIVPRVTGVHMLLESFEPIHGVLLCEGEDIDPSLYDAELSGFAPEELEEIRALHASDTAIDKEKDTIELRLAKLCLERNIPYLGICRGSQVLNVACGGTLYQDIEKEISKNCSLGQRVVHMNYENYDGHRHLVKVVEDTPLHQWFRDSLEENKMEIMVNSYHHQGVKKLAQRFVPMAFASDGLIEGFYDPDAYNPQEGKFIMGLQFHPERMRNQDSDNFDYPGCKSAYQEFVKAVIAYEKKLSCSASIPKSVKLDQEIEKKRKVIVRSFSIARNMYSSGGGKVSGQESELQVGAEFLEANTALSLQQENRLKQMGATVRNASTYIERLKMNEERERVARNIIGKMSVGQLSDLISFYHMMGQICSEALEKKLHDLV
cccccccccccEEEEEccccccccccccccHHHHHHHHHHcccEEEEccccccHHHHHHHHccccEEEEccccccccccccccccccccHHHHHHHHHccccccccccccHHHHHHHHHHHHccccEEEEcHHHHHHHHHcccccccccccccccccccccccccccccccccccEEEEEccccHHHHHHcccccccccEEEcccccccHHHccccccEEEEEcccccEEEEEccccccccccccEEEEcccccccccccccccccHHHHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHccccEEccccccHHHHccccccccccHHcccccccHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHccc
cccccccccccEEEEEcccEEcccccEEEccHHHHHHHHHcccccEEEcccccHHHHHHHHHHccEEEEEcccccccHHcccccccccHHHHHHHHHHccccccccHHHccccHHHHHHHHHccccEEEccHHHHccEEEccccHHHHHHHcccccHHHcccccccccccccccccEEEEccccHHHHHHccccccccccEEEccHHHHHHHHHccccEEEEEccccEEEEEEEccccccccccEEEEEEcccHHHccccccccccHHHHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHcHHHHHHHccHHHHHHHHHHHHHcccHccHHHHHHHHcccHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHccc
mgssdlsmilpRVLIVSRRTVRKNKFVDFVGEYHLDLIVSygavpvivprVTGVHMLLEsfepihgvllcegedidpslydaelsgfapEELEEIRALhasdtaidkEKDTIELRLAKLCLernipylgicrgsqvlnvacggtlyQDIEKEISKncslgqrvvhmnyenydghRHLVKvvedtplhqwFRDSLEENKMEIMVNSYHHQGVKKLAQRFVpmafasdgliegfydpdaynpqegkfimglqfhpermrnqdsdnfdypgckSAYQEFVKAVIAYEKKLscsasipksvklDQEIEKKRKVIVRSFSIARNMyssgggkvsgqesELQVGAEFLEANTALSLQQENRLKQMGATVRNASTYIERLKMNEERERVARNIIGKMSVGQLSDLISFYHMMGQICSEALEKKLHDLV
mgssdlsmilprvlivsrrtvrknKFVDFVGEYHLDLIVSYGAVPVIVPRVTGVHMLLESFEPIHGVLLCEGEDIDPSLYDAELSGFAPEELEEIRALhasdtaidkekDTIELRLAKLCLERNIPYLGICRGSQVLNVACGGTLYQDIEKEISKNCSLGQRVVHMNYENYDGHRHLVKVVEDTPLHQWFRDSLEENKMEIMVNSYHHQGVKKLAQRFVPMAFASDGLIEGFYDPDAYNPQEGKFIMGLQFHPERMRNQDSDNFDYPGCKSAYQEFVKAVIAYEKKlscsasipksvkldqeiekKRKVIVRSFSIARNMYSSGGGKVSGQESELQVGAEFLEANTALSLQQENRLKQMGATVRNASTYIERLKMNEERERVARNIIGKMSVGQLSDLISFYHMMGQICSEALEKKLHDLV
MGSSDLSMILPRVLIVSRRTVRKNKFVDFVGEYHLDLIVSYGAVPVIVPRVTGVHMLLESFEPIHGVLLCEGEDIDPSLYDAELSGFAPEELEEIRALHASDTAIDKEKDTIELRLAKLCLERNIPYLGICRGSQVLNVACGGTLYQDIEKEISKNCSLGQRVVHMNYENYDGHRHLVKVVEDTPLHQWFRDSLEENKMEIMVNSYHHQGVKKLAQRFVPMAFASDGLIEGFYDPDAYNPQEGKFIMGLQFHPERMRNQDSDNFDYPGCKSAYQEFVKAVIAYEKKLSCSASIPKSVKLDQEIEKKRKVIVRSFSIARNMYSSGGGKVSGQESELQVGAEFLEANTALSLQQENRLKQMGATVRNASTYIERLKMNEERERVARNIIGKMSVGQLSDLISFYHMMGQICSEALEKKLHDLV
*******MILPRVLIVSRRTVRKNKFVDFVGEYHLDLIVSYGAVPVIVPRVTGVHMLLESFEPIHGVLLCEGEDIDPSLYDAELSGFAPEELEEIRALHASDTAIDKEKDTIELRLAKLCLERNIPYLGICRGSQVLNVACGGTLYQDIEKEISKNCSLGQRVVHMNYENYDGHRHLVKVVEDTPLHQWFRDSLEENKMEIMVNSYHHQGVKKLAQRFVPMAFASDGLIEGFYDPDAYNPQEGKFIMGLQFH**********NFDYPGCKSAYQEFVKAVIAYEKKLSCSASIPKSVKLDQEIEKKRKVIVRSFSIARN************************************************TYIERL*******RVARNIIGKMSVGQLSDLISFYHMMGQICSEA*********
************VLIVSRRTVRKNKFVDFVGEYHLDLIVSYGAVPVIVPRVTGVHMLLESFEPIHGVLLCEGEDIDPSLYDAELSGFAPEELEEIRALHASDTAIDKEKDTIELRLAKLCLERNIPYLGICRGSQVLNVACGGTLYQDIEKEISKNCSLGQRVVHMNYENYDGHRHLVKVVEDTPLHQWFRDSLEENKMEIMVNSYHHQGVKKLAQRFVPMAFASDGLIEGFYDPDAYNPQEGKFIMGLQFHPERMRNQDSDNFDYPGCKSAYQEFVKAVI************************KRKVIVRSFSIAR*************ESELQVGAEFLE***ALSLQQENRLKQMGATVRN************************MSVGQLSDLISFYHMMGQICSEALEKKLHD**
MGSSDLSMILPRVLIVSRRTVRKNKFVDFVGEYHLDLIVSYGAVPVIVPRVTGVHMLLESFEPIHGVLLCEGEDIDPSLYDAELSGFAPEELEEIRALHASDTAIDKEKDTIELRLAKLCLERNIPYLGICRGSQVLNVACGGTLYQDIEKEISKNCSLGQRVVHMNYENYDGHRHLVKVVEDTPLHQWFRDSLEENKMEIMVNSYHHQGVKKLAQRFVPMAFASDGLIEGFYDPDAYNPQEGKFIMGLQFHPERMRNQDSDNFDYPGCKSAYQEFVKAVIAYEKKLSCSASIPKSVKLDQEIEKKRKVIVRSFSIARNMYS***********ELQVGAEFLEANTALSLQQENRLKQMGATVRNASTYIERLKMNEERERVARNIIGKMSVGQLSDLISFYHMMGQICSEALEKKLHDLV
*******MILPRVLIVSRRTVRKNKFVDFVGEYHLDLIVSYGAVPVIVPRVTGVHMLLESFEPIHGVLLCEGEDIDPSLYDAELSGFAPEELEEIRALHASDTAIDKEKDTIELRLAKLCLERNIPYLGICRGSQVLNVACGGTLYQDIEKEISKNCSLGQRVVHMNYENYDGHRHLVKVVEDTPLHQWFRDSLEENKMEIMVNSYHHQGVKKLAQRFVPMAFASDGLIEGFYDPDAYNPQEGKFIMGLQFHPERMRNQDSDNFDYPGCKSAYQEFVKAVIAYEKKLSCSASIPKSVKLDQEIEKKRKVIVRSFSIARNMYSSGG*****Q*SELQVGAEFLEANTALSLQQENRLKQMGATVRNASTYIERLKMNEERERVARNIIGKMSVGQLSDLISFYHMMGQICSEALEKKL*D**
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MGSSDLSMILPRVLIVSRRTVRKNKFVDFVGEYHLDLIVSYGAVPVIVPRVTGVHMLLESFEPIHGVLLCEGEDIDPSLYDAELSGFAPEELEEIRALHASDTAIDKEKDTIELRLAKLCLERNIPYLGICRGSQVLNVACGGTLYQDIEKEISKNCSLGQRVVHMNYENYDGHRHLVKVVEDTPLHQWFRDSLEENKMEIMVNSYHHQGVKKLAQRFVPMAFASDGLIEGFYDPDAYNPQEGKFIMGLQFHPERMRNQDSDNFDYPGCKSAYQEFVKAVIAYEKKLSCSASIPKSVKLDQEIEKKRKVIVRSFSIARNMYSSGGGKVSGQESELQVGAEFLEANTALSLQQENRLKQMGATVRNASTYIERLKMNEERERVARNIIGKMSVGQLSDLISFYHMMGQICSEALEKKLHDLV
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query421 2.2.26 [Sep-21-2011]
P49865239 Protein NtpR OS=Enterococ yes no 0.522 0.920 0.269 2e-18
Q9ZDC7281 Putative glutamine amidot yes no 0.522 0.782 0.267 3e-17
Q9HDV0253 Putative glutamine amidot yes no 0.510 0.849 0.272 3e-17
Q9CE00236 Putative glutamine amidot yes no 0.548 0.978 0.272 1e-15
O33341308 Putative glutamine amidot yes no 0.370 0.506 0.295 7e-15
Q8X7G2254 Gamma-glutamyl-gamma-amin N/A no 0.498 0.826 0.282 1e-11
P22347188 Putative glutamine amidot N/A no 0.413 0.925 0.292 4e-11
Q83LB6254 Gamma-glutamyl-gamma-amin yes no 0.498 0.826 0.274 9e-11
Q3Z146254 Gamma-glutamyl-gamma-amin yes no 0.498 0.826 0.274 1e-10
P76038254 Gamma-glutamyl-gamma-amin N/A no 0.498 0.826 0.274 1e-10
>sp|P49865|NTPR_ENTHA Protein NtpR OS=Enterococcus hirae (strain ATCC 9790 / DSM 20160 / JCM 8729 / LMG 6399 / NBRC 3181 / NCIMB 6459 / NCDO 1258) GN=ntpR PE=4 SV=2 Back     alignment and function desciption
 Score = 94.0 bits (232), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 69/256 (26%), Positives = 116/256 (45%), Gaps = 36/256 (14%)

Query: 14  LIVSRRTVRKNKFVDFVGEYHLDLIVSYGAVPVIVPRVTGVHMLLESFEPIHGVLLCEGE 73
           LI +  T + N+ V +  +  ++ +     +P+++P ++         + I  ++L  G+
Sbjct: 12  LIRATDTFQGNQ-VTYTPQGFVNAVQQADGLPIVLP-ISSPKTASAYIDQIDKLILAGGQ 69

Query: 74  DIDPSLYDAELSGFAPEELEEIRALHASDTAIDKEKDTIELRLAKLCLERNIPYLGICRG 133
           DI P LY                  H      + ++D  E  L    L++N P   +CRG
Sbjct: 70  DISPQLYH--------------EPPHPKLLETNLQRDLFEAALISEALKQNKPIFAVCRG 115

Query: 134 SQVLNVACGGTLYQDIEKEISKNCSLGQRVVHMNYENYDGHRHLVKVVEDTPLHQWFRDS 193
            Q+LNV  GG+LYQD+      +    Q      +       H V+++ DT L+Q   D+
Sbjct: 116 MQLLNVVLGGSLYQDLTTYPKWSVKHEQHPTAPQFAT-----HEVEILPDTLLYQLLPDT 170

Query: 194 LEENKMEIMVNSYHHQGVKKLAQRFVPMAFASDGLIEGFYDPDAYNPQEGKFIMGLQFHP 253
                   +VNSYHHQ +K+LA      AF+ DGL+EG    D     +   + G+Q+HP
Sbjct: 171 -------YLVNSYHHQALKELAPSLKATAFSPDGLVEGIESLD-----KDVRLFGVQWHP 218

Query: 254 ERMRNQDSDN---FDY 266
           E   + +S +   FD+
Sbjct: 219 ELTHSSNSTDQGLFDF 234

Enterococcus hirae (taxid: 1354)
>sp|Q9ZDC7|Y404_RICPR Putative glutamine amidotransferase-like protein RP404 OS=Rickettsia prowazekii (strain Madrid E) GN=RP404 PE=4 SV=1 Back     alignment and function description
>sp|Q9HDV0|YHE5_SCHPO Putative glutamine amidotransferase PB2B2.05 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBPB2B2.05 PE=4 SV=2 Back     alignment and function description
>sp|Q9CE00|YVDE_LACLA Putative glutamine amidotransferase-like protein YvdE OS=Lactococcus lactis subsp. lactis (strain IL1403) GN=yvdE PE=4 SV=1 Back     alignment and function description
>sp|O33341|Y2859_MYCTU Putative glutamine amidotransferase Rv2859c OS=Mycobacterium tuberculosis GN=Rv2859c PE=1 SV=1 Back     alignment and function description
>sp|Q8X7G2|PUUD_ECO57 Gamma-glutamyl-gamma-aminobutyrate hydrolase OS=Escherichia coli O157:H7 GN=puuD PE=3 SV=2 Back     alignment and function description
>sp|P22347|YVDE_LACLC Putative glutamine amidotransferase-like protein YvdE homolog (Fragment) OS=Lactococcus lactis subsp. cremoris PE=4 SV=3 Back     alignment and function description
>sp|Q83LB6|PUUD_SHIFL Gamma-glutamyl-gamma-aminobutyrate hydrolase OS=Shigella flexneri GN=puuD PE=3 SV=5 Back     alignment and function description
>sp|Q3Z146|PUUD_SHISS Gamma-glutamyl-gamma-aminobutyrate hydrolase OS=Shigella sonnei (strain Ss046) GN=puuD PE=3 SV=2 Back     alignment and function description
>sp|P76038|PUUD_ECOLI Gamma-glutamyl-gamma-aminobutyrate hydrolase PuuD OS=Escherichia coli (strain K12) GN=puuD PE=1 SV=2 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query421
224108417430 predicted protein [Populus trichocarpa] 0.995 0.974 0.845 0.0
255572166432 Gamma-glutamyl-gamma-aminobutyrate hydro 0.992 0.967 0.844 0.0
225424069425 PREDICTED: putative glutamine amidotrans 0.995 0.985 0.799 0.0
147792363425 hypothetical protein VITISV_027946 [Viti 0.995 0.985 0.797 0.0
224065246426 predicted protein [Populus trichocarpa] 0.995 0.983 0.788 0.0
359488254427 PREDICTED: uncharacterized protein LOC10 0.995 0.981 0.790 0.0
449490203424 PREDICTED: LOW QUALITY PROTEIN: putative 1.0 0.992 0.775 0.0
356569047425 PREDICTED: putative glutamine amidotrans 0.995 0.985 0.775 0.0
255551442426 Gamma-glutamyl-gamma-aminobutyrate hydro 0.995 0.983 0.775 0.0
449442070429 PREDICTED: LOW QUALITY PROTEIN: uncharac 1.0 0.981 0.768 0.0
>gi|224108417|ref|XP_002314840.1| predicted protein [Populus trichocarpa] gi|222863880|gb|EEF01011.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
 Score =  750 bits (1937), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 356/421 (84%), Positives = 393/421 (93%), Gaps = 2/421 (0%)

Query: 1   MGSSDLSMILPRVLIVSRRTVRKNKFVDFVGEYHLDLIVSYGAVPVIVPRVTGVHMLLES 60
           M +SDLSMILPRVLIVSRRTVRKNKFVDFVGEYHLDLIVSYGAVPVIVPRV+GVHMLLES
Sbjct: 6   MANSDLSMILPRVLIVSRRTVRKNKFVDFVGEYHLDLIVSYGAVPVIVPRVSGVHMLLES 65

Query: 61  FEPIHGVLLCEGEDIDPSLYDAELSGFAPEELEEIRALHASDTAIDKEKDTIELRLAKLC 120
           FEPIHGVLLCEGEDIDPS YDAELSGF+PEELEEIR +H SDT+ID+EKDTIELRLAKLC
Sbjct: 66  FEPIHGVLLCEGEDIDPSHYDAELSGFSPEELEEIRKVHVSDTSIDREKDTIELRLAKLC 125

Query: 121 LERNIPYLGICRGSQVLNVACGGTLYQDIEKEISKNCSLGQRVVHMNYENYDGHRHLVKV 180
           LERNIPYLGICRGSQVLNVACGGTLYQD+EKE+SK     QRVVHM+YENYDGHRH+VKV
Sbjct: 126 LERNIPYLGICRGSQVLNVACGGTLYQDVEKELSKKVPEEQRVVHMDYENYDGHRHVVKV 185

Query: 181 VEDTPLHQWFRDSLEENKMEIMVNSYHHQGVKKLAQRFVPMAFASDGLIEGFYDPDAYNP 240
           +E+TPLHQWF+DSLEE+KMEIMVNSYHHQGV+KLAQRFVPMAFA DGLIEGFYDPDAYNP
Sbjct: 186 LENTPLHQWFKDSLEEDKMEIMVNSYHHQGVRKLAQRFVPMAFAPDGLIEGFYDPDAYNP 245

Query: 241 QEGKFIMGLQFHPERMRNQDSDNFDYPGCKSAYQEFVKAVIAYEKKLSCSASIPKSVKLD 300
           +EGKFIMGLQFHPERMRN+DSD+FDYPGC SAY+EF KAVIAYEKKL+ S  + ++ KL+
Sbjct: 246 EEGKFIMGLQFHPERMRNEDSDDFDYPGCPSAYKEFAKAVIAYEKKLNRSECVLEAPKLN 305

Query: 301 QEIEKKRKVIVRSFSIARNMYSSGGGKVSGQESELQVGAEFLEANTALSLQQENRLKQMG 360
           QE+E+KR+++VRSFSIARNMYSSGGG  +GQES+LQVGAEFLEA+TALSLQQE RLKQMG
Sbjct: 306 QELERKRRILVRSFSIARNMYSSGGG--TGQESDLQVGAEFLEASTALSLQQEKRLKQMG 363

Query: 361 ATVRNASTYIERLKMNEERERVARNIIGKMSVGQLSDLISFYHMMGQICSEALEKKLHDL 420
           ATVRNAS Y ERL MNEERER+AR I+GKMS+ QLSDLISFYHMMG +CSEALE+KL D 
Sbjct: 364 ATVRNASVYKERLTMNEERERLARAIMGKMSISQLSDLISFYHMMGNLCSEALERKLQDR 423

Query: 421 V 421
           V
Sbjct: 424 V 424

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|255572166|ref|XP_002527023.1| Gamma-glutamyl-gamma-aminobutyrate hydrolase, putative [Ricinus communis] gi|223533658|gb|EEF35395.1| Gamma-glutamyl-gamma-aminobutyrate hydrolase, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|225424069|ref|XP_002279823.1| PREDICTED: putative glutamine amidotransferase-like protein RP404 [Vitis vinifera] gi|297737777|emb|CBI26978.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|147792363|emb|CAN76985.1| hypothetical protein VITISV_027946 [Vitis vinifera] Back     alignment and taxonomy information
>gi|224065246|ref|XP_002301736.1| predicted protein [Populus trichocarpa] gi|222843462|gb|EEE81009.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|359488254|ref|XP_002280944.2| PREDICTED: uncharacterized protein LOC100253189 [Vitis vinifera] gi|296087253|emb|CBI33627.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|449490203|ref|XP_004158536.1| PREDICTED: LOW QUALITY PROTEIN: putative glutamine amidotransferase-like protein RP404-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|356569047|ref|XP_003552718.1| PREDICTED: putative glutamine amidotransferase-like protein RP404-like [Glycine max] Back     alignment and taxonomy information
>gi|255551442|ref|XP_002516767.1| Gamma-glutamyl-gamma-aminobutyrate hydrolase, putative [Ricinus communis] gi|223544140|gb|EEF45665.1| Gamma-glutamyl-gamma-aminobutyrate hydrolase, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|449442070|ref|XP_004138805.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC101215742 [Cucumis sativus] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query421
TAIR|locus:2176742436 AT5G38200 [Arabidopsis thalian 0.983 0.949 0.725 1.3e-169
TAIR|locus:2033324433 AT1G66860 [Arabidopsis thalian 0.985 0.958 0.689 1.6e-159
TAIR|locus:2196174395 GAT1_2.1 "AT1G15040" [Arabidop 0.871 0.929 0.577 1.8e-110
UNIPROTKB|Q5LPL1259 SPO2837 "Uncharacterized prote 0.522 0.849 0.308 6.1e-18
TIGR_CMR|SPO_2837259 SPO_2837 "conserved hypothetic 0.522 0.849 0.308 6.1e-18
UNIPROTKB|Q8EHF5253 puuD "Gamma-glutamyl-aminobuty 0.517 0.861 0.301 7.7e-16
TIGR_CMR|SO_1267253 SO_1267 "conserved hypothetica 0.517 0.861 0.301 7.7e-16
UNIPROTKB|Q71YM1244 LMOf2365_1822 "Glutamine amido 0.418 0.721 0.313 2.1e-15
UNIPROTKB|Q47V50255 CPS_4678 "Putative uncharacter 0.470 0.776 0.331 1.6e-14
TIGR_CMR|CPS_4678255 CPS_4678 "conserved hypothetic 0.470 0.776 0.331 1.6e-14
TAIR|locus:2176742 AT5G38200 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1649 (585.5 bits), Expect = 1.3e-169, P = 1.3e-169
 Identities = 301/415 (72%), Positives = 368/415 (88%)

Query:     4 SDLSMILPRVLIVSRRTVRKNKFVDFVGEYHLDLIVSYGAVPVIVPRVTGVHMLLESFEP 63
             +DLS ILPRVL+VSRRTVRKNKFVDFVGEYHLDLIV YG VPVIVPRVTGVHMLLESF+P
Sbjct:    11 NDLSQILPRVLVVSRRTVRKNKFVDFVGEYHLDLIVRYGCVPVIVPRVTGVHMLLESFKP 70

Query:    64 IHGVLLCEGEDIDPSLYDAELSGFAPEELEEIRALHASDTAIDKEKDTIELRLAKLCLER 123
             IHGVLLCEGEDIDPSLY++E+S  +PEEL+EIR  HASDTAIDKEKD+IEL LAKLCLE+
Sbjct:    71 IHGVLLCEGEDIDPSLYESEISSLSPEELQEIRETHASDTAIDKEKDSIELGLAKLCLEQ 130

Query:   124 NIPYLGICRGSQVLNVACGGTLYQDIEKEISKNCSLGQRVVHMNYENYDGHRHLVKVVED 183
             NIPYLGICRGSQ+LNVACGGTLY D+EKE++      +R +H++Y+NYDGHRH+V++VE+
Sbjct:   131 NIPYLGICRGSQILNVACGGTLYLDLEKELTNKLPEERRTMHIDYDNYDGHRHVVRIVEN 190

Query:   184 TPLHQWFRDSLEENKMEIMVNSYHHQGVKKLAQRFVPMAFASDGLIEGFYDPDAYNPQEG 243
             +PLH WF+DSL+   MEI+VNSYHHQGVK+LAQRFVPMAFA+DGL+EGFYDPDAYNP+EG
Sbjct:   191 SPLHSWFKDSLDGENMEILVNSYHHQGVKRLAQRFVPMAFAADGLMEGFYDPDAYNPEEG 250

Query:   244 KFIMGLQFHPERMRNQDSDNFDYPGCKSAYQEFVKAVIAYEKKLSCSASIPKSVKLDQEI 303
             KFIMGLQFHPERMR  D D FDYPGC +AYQEF KAVIAY+KKL+ S S+PK++KLD E+
Sbjct:   251 KFIMGLQFHPERMRQHDLDEFDYPGCPAAYQEFAKAVIAYQKKLNSSLSVPKTLKLDSEM 310

Query:   304 EKKRKVIVRSFSIARNMYSSGG-GKVSGQESELQVGAEFLEANTALSLQQENRLKQMGAT 362
             E KRK++VRSFS+A+ MY  G  GK   +ESEL+VGAEFLE+NTALS +QE RLK+MGAT
Sbjct:   311 ENKRKMLVRSFSLAKYMYVRGAPGKNPSKESELEVGAEFLESNTALSAEQEMRLKEMGAT 370

Query:   363 VRNASTYIERLKMNEERERVARNIIGKMSVGQLSDLISFYHMMGQICSEALEKKL 417
             VRN  +Y+++LK++E+++R+ARN++ KM++ QLS+L++FYH+MG IC E L++KL
Sbjct:   371 VRNGGSYMKKLKVDEDKQRMARNMMKKMNIEQLSELMAFYHLMGNICGEVLDRKL 425
GO:0005794 "Golgi apparatus" evidence=ISM
GO:0006541 "glutamine metabolic process" evidence=IEA
GO:0016787 "hydrolase activity" evidence=IEA
TAIR|locus:2033324 AT1G66860 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2196174 GAT1_2.1 "AT1G15040" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|Q5LPL1 SPO2837 "Uncharacterized protein" [Ruegeria pomeroyi DSS-3 (taxid:246200)] Back     alignment and assigned GO terms
TIGR_CMR|SPO_2837 SPO_2837 "conserved hypothetical protein" [Ruegeria pomeroyi DSS-3 (taxid:246200)] Back     alignment and assigned GO terms
UNIPROTKB|Q8EHF5 puuD "Gamma-glutamyl-aminobutyrate hydrolase PuuD" [Shewanella oneidensis MR-1 (taxid:211586)] Back     alignment and assigned GO terms
TIGR_CMR|SO_1267 SO_1267 "conserved hypothetical protein" [Shewanella oneidensis MR-1 (taxid:211586)] Back     alignment and assigned GO terms
UNIPROTKB|Q71YM1 LMOf2365_1822 "Glutamine amidotransferase, class-I" [Listeria monocytogenes serotype 4b str. F2365 (taxid:265669)] Back     alignment and assigned GO terms
UNIPROTKB|Q47V50 CPS_4678 "Putative uncharacterized protein" [Colwellia psychrerythraea 34H (taxid:167879)] Back     alignment and assigned GO terms
TIGR_CMR|CPS_4678 CPS_4678 "conserved hypothetical protein" [Colwellia psychrerythraea 34H (taxid:167879)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query421
cd01745189 cd01745, GATase1_2, Subgroup of proteins having th 2e-64
pfam07722219 pfam07722, Peptidase_C26, Peptidase C26 6e-49
COG2071243 COG2071, COG2071, Predicted glutamine amidotransfe 3e-48
PRK11366254 PRK11366, puuD, gamma-glutamyl-gamma-aminobutyrate 2e-15
cd01741188 cd01741, GATase1_1, Subgroup of proteins having th 1e-09
pfam00117186 pfam00117, GATase, Glutamine amidotransferase clas 7e-09
COG0518198 COG0518, GuaA, GMP synthase - Glutamine amidotrans 7e-08
cd01744178 cd01744, GATase1_CPSase, Small chain of the glutam 1e-04
cd01742181 cd01742, GATase1_GMP_Synthase, Type 1 glutamine am 2e-04
cd01653115 cd01653, GATase1, Type 1 glutamine amidotransferas 2e-04
cd0312892 cd03128, GAT_1, Type 1 glutamine amidotransferase 0.001
TIGR00888188 TIGR00888, guaA_Nterm, GMP synthase (glutamine-hyd 0.001
PRK00758184 PRK00758, PRK00758, GMP synthase subunit A; Valida 0.002
>gnl|CDD|153216 cd01745, GATase1_2, Subgroup of proteins having the Type 1 glutamine amidotransferase (GATase1) domain Back     alignment and domain information 
 Score =  204 bits (522), Expect = 2e-64
 Identities = 78/252 (30%), Positives = 106/252 (42%), Gaps = 74/252 (29%)

Query: 13  VLIVSRRTVRKNK--FVDFVGEYHLDLIVSYGAVPVIVPRVTGVHMLLESFEPIHGVLLC 70
           + I +R    +      D++ +Y++D +   G +PV++P V     L +  E + G+LL 
Sbjct: 1   IGITARLREEEGGYERRDYLNQYYVDAVRKAGGLPVLLPPVDDEEDLEQYLELLDGLLLT 60

Query: 71  EGEDIDPSLYDAELSGFAPEELEEIRALHASDTAIDKEKDTIELRLAKLCLERNIPYLGI 130
            G D+DP LY  E               H     ID E+D  EL L +  LER  P LGI
Sbjct: 61  GGGDVDPPLYGEEP--------------HPELGPIDPERDAFELALLRAALERGKPILGI 106

Query: 131 CRGSQVLNVACGGTLYQDIEKEISKNCSLGQRVVHMNYENYDGHRHLVKVVEDTPLHQWF 190
           CRG Q+LNVA GGTLYQD                                          
Sbjct: 107 CRGMQLLNVALGGTLYQD------------------------------------------ 124

Query: 191 RDSLEENKMEIMVNSYHHQGVKKLAQRFVPMAFASDGLIEGFYDPDAYNPQEGKFIMGLQ 250
                     I VNS HHQ +K+LA      A A DG+IE    PD        F++G+Q
Sbjct: 125 ----------IRVNSLHHQAIKRLADGLRVEARAPDGVIEAIESPDR------PFVLGVQ 168

Query: 251 FHPERMRNQDSD 262
           +HPE + + D D
Sbjct: 169 WHPEWLADTDPD 180

This group contains a subgroup of proteins having the Type 1 glutamine amidotransferase (GATase1) domain. GATase activity catalyses the transfer of ammonia from the amide side chain of glutamine to an acceptor substrate. Glutamine amidotransferases (GATase) includes the triad family of amidotransferases which have a conserved Cys-His-Glu catalytic triad in the glutaminase active site. In this subgroup this triad is conserved. GATase activity can be found in a range of biosynthetic enzymes, including: glutamine amidotransferase, formylglycinamide ribonucleotide, GMP synthetase , anthranilate synthase component II, glutamine-dependent carbamoyl phosphate synthase, cytidine triphosphate synthetase, gamma-glutamyl hydrolase, imidazole glycerol phosphate synthase and, cobyric acid synthase. Glutamine amidotransferase (GATase) domains can occur either as single polypeptides, as in glutamine amidotransferases, or as domains in a much larger multifunctional synthase protein, such as CPSase. Length = 189
>gnl|CDD|219535 pfam07722, Peptidase_C26, Peptidase C26 Back     alignment and domain information
>gnl|CDD|224982 COG2071, COG2071, Predicted glutamine amidotransferases [General function prediction only] Back     alignment and domain information
>gnl|CDD|183101 PRK11366, puuD, gamma-glutamyl-gamma-aminobutyrate hydrolase; Provisional Back     alignment and domain information
>gnl|CDD|153212 cd01741, GATase1_1, Subgroup of proteins having the Type 1 glutamine amidotransferase (GATase1) domain Back     alignment and domain information
>gnl|CDD|215729 pfam00117, GATase, Glutamine amidotransferase class-I Back     alignment and domain information
>gnl|CDD|223592 COG0518, GuaA, GMP synthase - Glutamine amidotransferase domain [Nucleotide transport and metabolism] Back     alignment and domain information
>gnl|CDD|153215 cd01744, GATase1_CPSase, Small chain of the glutamine-dependent form of carbamoyl phosphate synthase, CPSase II Back     alignment and domain information
>gnl|CDD|153213 cd01742, GATase1_GMP_Synthase, Type 1 glutamine amidotransferase (GATase1) domain found in GMP synthetase Back     alignment and domain information
>gnl|CDD|153210 cd01653, GATase1, Type 1 glutamine amidotransferase (GATase1)-like domain Back     alignment and domain information
>gnl|CDD|153222 cd03128, GAT_1, Type 1 glutamine amidotransferase (GATase1)-like domain Back     alignment and domain information
>gnl|CDD|129966 TIGR00888, guaA_Nterm, GMP synthase (glutamine-hydrolyzing), N-terminal domain or A subunit Back     alignment and domain information
>gnl|CDD|179112 PRK00758, PRK00758, GMP synthase subunit A; Validated Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 421
COG2071243 Predicted glutamine amidotransferases [General fun 100.0
PRK11366254 puuD gamma-glutamyl-gamma-aminobutyrate hydrolase; 100.0
PF07722217 Peptidase_C26: Peptidase C26; InterPro: IPR011697 100.0
KOG0370 1435 consensus Multifunctional pyrimidine synthesis pro 100.0
cd01745189 GATase1_2 Subgroup of proteins having the Type 1 g 100.0
PRK06186229 hypothetical protein; Validated 99.97
TIGR00888188 guaA_Nterm GMP synthase (glutamine-hydrolyzing), N 99.97
PRK08007187 para-aminobenzoate synthase component II; Provisio 99.97
PRK07765214 para-aminobenzoate synthase component II; Provisio 99.96
cd01742181 GATase1_GMP_Synthase Type 1 glutamine amidotransfe 99.96
PRK00758184 GMP synthase subunit A; Validated 99.96
PRK05670189 anthranilate synthase component II; Provisional 99.96
TIGR00566188 trpG_papA glutamine amidotransferase of anthranila 99.96
PRK06774191 para-aminobenzoate synthase component II; Provisio 99.96
cd01746235 GATase1_CTP_Synthase Type 1 glutamine amidotransfe 99.96
cd01744178 GATase1_CPSase Small chain of the glutamine-depend 99.96
cd01747273 GATase1_Glutamyl_Hydrolase Type 1 glutamine amidot 99.96
TIGR01368358 CPSaseIIsmall carbamoyl-phosphate synthase, small 99.96
PRK12564360 carbamoyl phosphate synthase small subunit; Review 99.96
PRK05380533 pyrG CTP synthetase; Validated 99.96
PRK07649195 para-aminobenzoate/anthranilate synthase glutamine 99.96
CHL00101190 trpG anthranilate synthase component 2 99.96
PLN02347 536 GMP synthetase 99.95
PRK06895190 putative anthranilate synthase component II; Provi 99.95
cd01743184 GATase1_Anthranilate_Synthase Type 1 glutamine ami 99.95
PRK08857193 para-aminobenzoate synthase component II; Provisio 99.95
PLN02335222 anthranilate synthase 99.95
PRK00074 511 guaA GMP synthase; Reviewed 99.95
PRK05637208 anthranilate synthase component II; Provisional 99.95
TIGR00337525 PyrG CTP synthase. CTP synthase is involved in pyr 99.95
COG0512191 PabA Anthranilate/para-aminobenzoate synthases com 99.95
PRK12838354 carbamoyl phosphate synthase small subunit; Review 99.95
COG0505368 CarA Carbamoylphosphate synthase small subunit [Am 99.94
COG0518198 GuaA GMP synthase - Glutamine amidotransferase dom 99.94
PF00117192 GATase: Glutamine amidotransferase class-I; InterP 99.93
PRK13566720 anthranilate synthase; Provisional 99.93
PRK09065237 glutamine amidotransferase; Provisional 99.93
CHL00197382 carA carbamoyl-phosphate synthase arginine-specifi 99.93
PRK07567242 glutamine amidotransferase; Provisional 99.93
PRK05665240 amidotransferase; Provisional 99.93
PRK14607 534 bifunctional glutamine amidotransferase/anthranila 99.93
cd01741188 GATase1_1 Subgroup of proteins having the Type 1 g 99.92
TIGR01815717 TrpE-clade3 anthranilate synthase, alpha proteobac 99.92
PRK06490239 glutamine amidotransferase; Provisional 99.92
COG0504533 PyrG CTP synthase (UTP-ammonia lyase) [Nucleotide 99.91
PRK09522 531 bifunctional glutamine amidotransferase/anthranila 99.91
PLN02771415 carbamoyl-phosphate synthase (glutamine-hydrolyzin 99.91
PLN02327557 CTP synthase 99.91
PRK13525189 glutamine amidotransferase subunit PdxT; Provision 99.9
PLN02889 918 oxo-acid-lyase/anthranilate synthase 99.9
PRK07053234 glutamine amidotransferase; Provisional 99.89
TIGR01823 742 PabB-fungal aminodeoxychorismate synthase, fungal 99.89
PRK13146209 hisH imidazole glycerol phosphate synthase subunit 99.89
PRK08250235 glutamine amidotransferase; Provisional 99.89
PRK13152201 hisH imidazole glycerol phosphate synthase subunit 99.88
PRK13141205 hisH imidazole glycerol phosphate synthase subunit 99.88
COG0118204 HisH Glutamine amidotransferase [Amino acid transp 99.88
PRK13170196 hisH imidazole glycerol phosphate synthase subunit 99.87
PRK13527200 glutamine amidotransferase subunit PdxT; Provision 99.87
PRK13181199 hisH imidazole glycerol phosphate synthase subunit 99.87
PRK13143200 hisH imidazole glycerol phosphate synthase subunit 99.87
cd01748198 GATase1_IGP_Synthase Type 1 glutamine amidotransfe 99.87
CHL00188210 hisH imidazole glycerol phosphate synthase subunit 99.87
TIGR01855196 IMP_synth_hisH imidazole glycerol phosphate syntha 99.84
KOG1622 552 consensus GMP synthase [Nucleotide transport and m 99.84
PRK14004210 hisH imidazole glycerol phosphate synthase subunit 99.83
TIGR01737227 FGAM_synth_I phosphoribosylformylglycinamidine syn 99.82
cd01749183 GATase1_PB Glutamine Amidotransferase (GATase_I) i 99.81
KOG1559340 consensus Gamma-glutamyl hydrolase [Coenzyme trans 99.8
KOG2387585 consensus CTP synthase (UTP-ammonia lyase) [Nucleo 99.8
TIGR03800184 PLP_synth_Pdx2 pyridoxal 5'-phosphate synthase, gl 99.79
PLN02617 538 imidazole glycerol phosphate synthase hisHF 99.77
PRK03619219 phosphoribosylformylglycinamidine synthase I; Prov 99.76
KOG0026223 consensus Anthranilate synthase, beta chain [Amino 99.75
PRK13142192 hisH imidazole glycerol phosphate synthase subunit 99.74
PLN02832248 glutamine amidotransferase subunit of pyridoxal 5' 99.69
KOG3179245 consensus Predicted glutamine synthetase [Nucleoti 99.66
KOG1224 767 consensus Para-aminobenzoate (PABA) synthase ABZ1 99.59
PRK01175261 phosphoribosylformylglycinamidine synthase I; Prov 99.59
PRK05368302 homoserine O-succinyltransferase; Provisional 99.55
PRK13526179 glutamine amidotransferase subunit PdxT; Provision 99.5
cd01740238 GATase1_FGAR_AT Type 1 glutamine amidotransferase 99.49
COG0047231 PurL Phosphoribosylformylglycinamidine (FGAM) synt 99.45
PF01174188 SNO: SNO glutamine amidotransferase family; InterP 99.39
COG0311194 PDX2 Predicted glutamine amidotransferase involved 99.39
PF13507259 GATase_5: CobB/CobQ-like glutamine amidotransferas 99.3
KOG0623 541 consensus Glutamine amidotransferase/cyclase [Amin 99.28
TIGR018571239 FGAM-synthase phosphoribosylformylglycinamidine sy 99.11
PLN032061307 phosphoribosylformylglycinamidine synthase; Provis 98.89
PRK052971290 phosphoribosylformylglycinamidine synthase; Provis 98.85
TIGR017351310 FGAM_synt phosphoribosylformylglycinamidine syntha 98.83
cd03130198 GATase1_CobB Type 1 glutamine amidotransferase (GA 98.62
cd01750194 GATase1_CobQ Type 1 glutamine amidotransferase (GA 98.51
PHA033661304 FGAM-synthase; Provisional 98.48
PRK06278 476 cobyrinic acid a,c-diamide synthase; Validated 98.45
TIGR017391202 tegu_FGAM_synt herpesvirus tegument protein/v-FGAM 98.38
cd03131175 GATase1_HTS Type 1 glutamine amidotransferase (GAT 98.37
PRK01077451 cobyrinic acid a,c-diamide synthase; Validated 98.32
PF04204298 HTS: Homoserine O-succinyltransferase ; InterPro: 98.32
TIGR00379449 cobB cobyrinic acid a,c-diamide synthase. This mod 98.27
KOG3210226 consensus Imidazoleglycerol-phosphate synthase sub 98.25
cd03146212 GAT1_Peptidase_E Type 1 glutamine amidotransferase 98.04
TIGR01001300 metA homoserine O-succinyltransferase. The apparen 97.99
PRK13896433 cobyrinic acid a,c-diamide synthase; Provisional 97.9
PF07685158 GATase_3: CobB/CobQ-like glutamine amidotransferas 97.89
KOG19071320 consensus Phosphoribosylformylglycinamidine syntha 97.83
cd01653115 GATase1 Type 1 glutamine amidotransferase (GATase1 97.8
PRK00784488 cobyric acid synthase; Provisional 97.76
cd0312892 GAT_1 Type 1 glutamine amidotransferase (GATase1)- 97.57
PRK05282233 (alpha)-aspartyl dipeptidase; Validated 97.34
COG0458 400 CarB Carbamoylphosphate synthase large subunit (sp 97.34
TIGR00313475 cobQ cobyric acid synthase CobQ. 97.3
PRK11780217 isoprenoid biosynthesis protein with amidotransfer 97.16
cd03144114 GATase1_ScBLP_like Type 1 glutamine amidotransfera 97.06
cd03129210 GAT1_Peptidase_E_like Type 1 glutamine amidotransf 97.01
cd03169180 GATase1_PfpI_1 Type 1 glutamine amidotransferase ( 96.98
COG1492486 CobQ Cobyric acid synthase [Coenzyme metabolism] 96.75
cd03134165 GATase1_PfpI_like A type 1 glutamine amidotransfer 96.56
TIGR01382166 PfpI intracellular protease, PfpI family. The memb 96.47
cd03133213 GATase1_ES1 Type 1 glutamine amidotransferase (GAT 96.32
COG1797451 CobB Cobyrinic acid a,c-diamide synthase [Coenzyme 96.3
COG3442250 Predicted glutamine amidotransferase [General func 96.29
cd03145217 GAT1_cyanophycinase Type 1 glutamine amidotransfer 95.83
cd03132142 GATase1_catalase Type 1 glutamine amidotransferase 95.79
PRK04155287 chaperone protein HchA; Provisional 95.75
cd03148232 GATase1_EcHsp31_like Type 1 glutamine amidotransfe 95.74
PF01965147 DJ-1_PfpI: DJ-1/PfpI family; InterPro: IPR002818 T 95.63
cd03147231 GATase1_Ydr533c_like Type 1 glutamine amidotransfe 95.57
PRK11574196 oxidative-stress-resistance chaperone; Provisional 95.56
cd03137187 GATase1_AraC_1 AraC transcriptional regulators hav 95.37
COG1897307 MetA Homoserine trans-succinylase [Amino acid tran 94.99
TIGR02069250 cyanophycinase cyanophycinase. This model describe 94.95
cd03140170 GATase1_PfpI_3 Type 1 glutamine amidotransferase ( 94.71
PF03575154 Peptidase_S51: Peptidase family S51; InterPro: IPR 94.51
cd03135163 GATase1_DJ-1 Type 1 glutamine amidotransferase (GA 94.27
PF09825367 BPL_N: Biotin-protein ligase, N terminal; InterPro 94.02
cd03141221 GATase1_Hsp31_like Type 1 glutamine amidotransfera 93.94
PRK11249752 katE hydroperoxidase II; Provisional 93.67
COG0693188 ThiJ Putative intracellular protease/amidase [Gene 93.65
cd03138195 GATase1_AraC_2 AraC transcriptional regulators hav 93.06
TIGR01383179 not_thiJ DJ-1 family protein. This model represent 92.4
cd03136185 GATase1_AraC_ArgR_like AraC transcriptional regula 91.17
COG3340224 PepE Peptidase E [Amino acid transport and metabol 90.8
TIGR01369 1050 CPSaseII_lrg carbamoyl-phosphate synthase, large s 90.75
cd03139183 GATase1_PfpI_2 Type 1 glutamine amidotransferase ( 90.66
PF00289110 CPSase_L_chain: Carbamoyl-phosphate synthase L cha 90.07
PRK12815 1068 carB carbamoyl phosphate synthase large subunit; R 90.06
PRK03378292 ppnK inorganic polyphosphate/ATP-NAD kinase; Provi 89.66
PRK03372306 ppnK inorganic polyphosphate/ATP-NAD kinase; Provi 89.24
PLN02735 1102 carbamoyl-phosphate synthase 89.04
PF13278166 DUF4066: Putative amidotransferase; PDB: 3BHN_A 3M 88.66
PRK09393322 ftrA transcriptional activator FtrA; Provisional 88.44
TIGR00177144 molyb_syn molybdenum cofactor synthesis domain. Th 88.26
PRK05294 1066 carB carbamoyl phosphate synthase large subunit; R 86.84
PRK14077287 pnk inorganic polyphosphate/ATP-NAD kinase; Provis 84.91
PRK01911292 ppnK inorganic polyphosphate/ATP-NAD kinase; Provi 84.29
PRK02649305 ppnK inorganic polyphosphate/ATP-NAD kinase; Provi 83.53
PRK04539296 ppnK inorganic polyphosphate/ATP-NAD kinase; Provi 83.07
PRK01215264 competence damage-inducible protein A; Provisional 82.89
PRK02155291 ppnK NAD(+)/NADH kinase family protein; Provisiona 82.17
TIGR02667163 moaB_proteo molybdenum cofactor biosynthesis prote 81.7
COG4242293 CphB Cyanophycinase and related exopeptidases [Sec 80.2
cd00758133 MoCF_BD MoCF_BD: molybdenum cofactor (MoCF) bindin 80.19
PRK05294 1066 carB carbamoyl phosphate synthase large subunit; R 80.19
>COG2071 Predicted glutamine amidotransferases [General function prediction only] Back     alignment and domain information 
Probab=100.00  E-value=5.1e-49  Score=371.39  Aligned_cols=237  Identities=35%  Similarity=0.543  Sum_probs=207.8

Q ss_pred             CCCcEEEEEecccc----CcccchhhhhhHHHHHHHHCCCeEEEEcCCCChhhhhhhcCCcCEEEECCCCCCCCCCcccc
Q 041791            8 MILPRVLIVSRRTV----RKNKFVDFVGEYHLDLIVSYGAVPVIVPRVTGVHMLLESFEPIHGVLLCEGEDIDPSLYDAE   83 (421)
Q Consensus         8 ~~~P~igI~~~~~~----~~~~~~~~v~~~yl~~l~~~Ga~~vivp~~~~~~~l~~~l~~~DGVIL~GG~didp~~y~~~   83 (421)
                      |.+|+|||++..-.    ..+.-..|+...|++++..+|+.|+++|...+.+.+...++.+||||||||.|+||..|+++
T Consensus         1 ~~kpvIGIt~~~~~~~~~~~~~~~~~~~~~yv~ai~~aGg~pillP~~~d~~~~~~~l~~iDgliltGg~nV~P~~YGee   80 (243)
T COG2071           1 MSKPVIGITADLIQEIVGFDGNPWSYLPYDYVDAIIKAGGIPILLPALEDPEDARQYLDLIDGLILTGGSNVDPSLYGEE   80 (243)
T ss_pred             CCCCEEEEecchhccccccCCccHHHHHHHHHHHHHHcCCceEEecCCCCHHHHHHHHhhccEEEecCCCcCCHHHcCCC
Confidence            57899999997643    24455788999999999999999999997767788888899999999999999999999998


Q ss_pred             ccCCChhhHHHHHhhccCccccchhhhHHHHHHHHHHHHcCCCEEEEchhhHHHHHHhCCcccccchhhhccccCCCcee
Q 041791           84 LSGFAPEELEEIRALHASDTAIDKEKDTIELRLAKLCLERNIPYLGICRGSQVLNVACGGTLYQDIEKEISKNCSLGQRV  163 (421)
Q Consensus        84 ~~~~~~e~~~~i~~~~~~~~~~d~~rd~~el~li~~ale~~iPiLGIClG~QlLava~GG~v~~~~~~e~g~~~~~~~~v  163 (421)
                      ..              +.+..+++.||.+|+++++.|+++++||||||||+|+||+++||+++++++...+       .+
T Consensus        81 ~~--------------~~~~~~~p~RD~~E~aLi~~ALe~~iPILgICRG~QllNVa~GGtL~q~i~~~~~-------~~  139 (243)
T COG2071          81 PS--------------EKDGPYDPERDAFELALIRAALERGIPILGICRGLQLLNVALGGTLYQDISEQPG-------HI  139 (243)
T ss_pred             CC--------------cccCCCCccccHHHHHHHHHHHHcCCCEEEEccchHHHHHHhcCeeehhhhcccc-------cc
Confidence            74              5667799999999999999999999999999999999999999999998864332       45


Q ss_pred             eeccccCCCCceeEEEEccCCcchhhcccccccCceeEEEeccccccccccCCCeEEEEEeCCCeEEEEEeCCCCCCCCC
Q 041791          164 VHMNYENYDGHRHLVKVVEDTPLHQWFRDSLEENKMEIMVNSYHHQGVKKLAQRFVPMAFASDGLIEGFYDPDAYNPQEG  243 (421)
Q Consensus       164 ~H~~~~~~~~~~h~V~i~~~s~L~~~~~~~l~~~~~~~~V~s~H~~~V~~L~~g~~vla~s~dg~ieaie~~~~~~~~~~  243 (421)
                      .|..+.+.....|.|.+.++|.|+++++..      .+.|||+|+|++++|+++++++|+++||.||||+.++      +
T Consensus       140 ~H~~~~~~~~~~H~V~i~~~s~La~i~g~~------~~~VNS~HhQaIk~La~~L~V~A~a~DG~VEAie~~~------~  207 (243)
T COG2071         140 DHRQPNPVHIESHEVHIEPGSKLAKILGES------EFMVNSFHHQAIKKLAPGLVVEARAPDGTVEAVEVKN------D  207 (243)
T ss_pred             cccCCCCcccceeEEEecCCccHHHhcCcc------ceeecchHHHHHHHhCCCcEEEEECCCCcEEEEEecC------C
Confidence            676666666668999999999999999862      2899999999999999999999999999999999986      4


Q ss_pred             CcEEEEccccCccCCCCCCCCCCchhhHHHHHHHHHHHHH
Q 041791          244 KFIMGLQFHPERMRNQDSDNFDYPGCKSAYQEFVKAVIAY  283 (421)
Q Consensus       244 ~~i~GvQFHPE~~~~~~~~~~d~~~~~~lf~~Fv~a~~~~  283 (421)
                      .|++|||||||+.....+      .+..||+.|+++++.+
T Consensus       208 ~fvlGVQWHPE~~~~~~~------~~~~LFe~F~~~~~~~  241 (243)
T COG2071         208 AFVLGVQWHPEYLVDTNP------LSLALFEAFVNACKKH  241 (243)
T ss_pred             ceEEEEecChhhhccCCh------HHHHHHHHHHHHHHhh
Confidence            899999999999986553      3689999999999865

>PRK11366 puuD gamma-glutamyl-gamma-aminobutyrate hydrolase; Provisional Back     alignment and domain information
>PF07722 Peptidase_C26: Peptidase C26; InterPro: IPR011697 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families Back     alignment and domain information
>KOG0370 consensus Multifunctional pyrimidine synthesis protein CAD (includes carbamoyl-phophate synthetase, aspartate transcarbamylase, and glutamine amidotransferase) [General function prediction only] Back     alignment and domain information
>cd01745 GATase1_2 Subgroup of proteins having the Type 1 glutamine amidotransferase (GATase1) domain Back     alignment and domain information
>PRK06186 hypothetical protein; Validated Back     alignment and domain information
>TIGR00888 guaA_Nterm GMP synthase (glutamine-hydrolyzing), N-terminal domain or A subunit Back     alignment and domain information
>PRK08007 para-aminobenzoate synthase component II; Provisional Back     alignment and domain information
>PRK07765 para-aminobenzoate synthase component II; Provisional Back     alignment and domain information
>cd01742 GATase1_GMP_Synthase Type 1 glutamine amidotransferase (GATase1) domain found in GMP synthetase Back     alignment and domain information
>PRK00758 GMP synthase subunit A; Validated Back     alignment and domain information
>PRK05670 anthranilate synthase component II; Provisional Back     alignment and domain information
>TIGR00566 trpG_papA glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase Back     alignment and domain information
>PRK06774 para-aminobenzoate synthase component II; Provisional Back     alignment and domain information
>cd01746 GATase1_CTP_Synthase Type 1 glutamine amidotransferase (GATase1) domain found in Cytidine Triphosphate Synthetase Back     alignment and domain information
>cd01744 GATase1_CPSase Small chain of the glutamine-dependent form of carbamoyl phosphate synthase, CPSase II Back     alignment and domain information
>cd01747 GATase1_Glutamyl_Hydrolase Type 1 glutamine amidotransferase (GATase1) domain found in gamma-Glutamyl Hydrolase Back     alignment and domain information
>TIGR01368 CPSaseIIsmall carbamoyl-phosphate synthase, small subunit Back     alignment and domain information
>PRK12564 carbamoyl phosphate synthase small subunit; Reviewed Back     alignment and domain information
>PRK05380 pyrG CTP synthetase; Validated Back     alignment and domain information
>PRK07649 para-aminobenzoate/anthranilate synthase glutamine amidotransferase component II; Validated Back     alignment and domain information
>CHL00101 trpG anthranilate synthase component 2 Back     alignment and domain information
>PLN02347 GMP synthetase Back     alignment and domain information
>PRK06895 putative anthranilate synthase component II; Provisional Back     alignment and domain information
>cd01743 GATase1_Anthranilate_Synthase Type 1 glutamine amidotransferase (GATase1) domain found in Anthranilate synthase Back     alignment and domain information
>PRK08857 para-aminobenzoate synthase component II; Provisional Back     alignment and domain information
>PLN02335 anthranilate synthase Back     alignment and domain information
>PRK00074 guaA GMP synthase; Reviewed Back     alignment and domain information
>PRK05637 anthranilate synthase component II; Provisional Back     alignment and domain information
>TIGR00337 PyrG CTP synthase Back     alignment and domain information
>COG0512 PabA Anthranilate/para-aminobenzoate synthases component II [Amino acid transport and metabolism / Coenzyme metabolism] Back     alignment and domain information
>PRK12838 carbamoyl phosphate synthase small subunit; Reviewed Back     alignment and domain information
>COG0505 CarA Carbamoylphosphate synthase small subunit [Amino acid transport and metabolism / Nucleotide transport and metabolism] Back     alignment and domain information
>COG0518 GuaA GMP synthase - Glutamine amidotransferase domain [Nucleotide transport and metabolism] Back     alignment and domain information
>PF00117 GATase: Glutamine amidotransferase class-I; InterPro: IPR017926 Glutamine amidotransferase (GATase) enzymes catalyse the removal of the ammonia group from glutamine and then transfer this group to a substrate to form a new carbon-nitrogen group [] Back     alignment and domain information
>PRK13566 anthranilate synthase; Provisional Back     alignment and domain information
>PRK09065 glutamine amidotransferase; Provisional Back     alignment and domain information
>CHL00197 carA carbamoyl-phosphate synthase arginine-specific small subunit; Provisional Back     alignment and domain information
>PRK07567 glutamine amidotransferase; Provisional Back     alignment and domain information
>PRK05665 amidotransferase; Provisional Back     alignment and domain information
>PRK14607 bifunctional glutamine amidotransferase/anthranilate phosphoribosyltransferase; Provisional Back     alignment and domain information
>cd01741 GATase1_1 Subgroup of proteins having the Type 1 glutamine amidotransferase (GATase1) domain Back     alignment and domain information
>TIGR01815 TrpE-clade3 anthranilate synthase, alpha proteobacterial clade Back     alignment and domain information
>PRK06490 glutamine amidotransferase; Provisional Back     alignment and domain information
>COG0504 PyrG CTP synthase (UTP-ammonia lyase) [Nucleotide transport and metabolism] Back     alignment and domain information
>PRK09522 bifunctional glutamine amidotransferase/anthranilate phosphoribosyltransferase; Provisional Back     alignment and domain information
>PLN02771 carbamoyl-phosphate synthase (glutamine-hydrolyzing) Back     alignment and domain information
>PLN02327 CTP synthase Back     alignment and domain information
>PRK13525 glutamine amidotransferase subunit PdxT; Provisional Back     alignment and domain information
>PLN02889 oxo-acid-lyase/anthranilate synthase Back     alignment and domain information
>PRK07053 glutamine amidotransferase; Provisional Back     alignment and domain information
>TIGR01823 PabB-fungal aminodeoxychorismate synthase, fungal clade Back     alignment and domain information
>PRK13146 hisH imidazole glycerol phosphate synthase subunit HisH; Provisional Back     alignment and domain information
>PRK08250 glutamine amidotransferase; Provisional Back     alignment and domain information
>PRK13152 hisH imidazole glycerol phosphate synthase subunit HisH; Provisional Back     alignment and domain information
>PRK13141 hisH imidazole glycerol phosphate synthase subunit HisH; Provisional Back     alignment and domain information
>COG0118 HisH Glutamine amidotransferase [Amino acid transport and metabolism] Back     alignment and domain information
>PRK13170 hisH imidazole glycerol phosphate synthase subunit HisH; Provisional Back     alignment and domain information
>PRK13527 glutamine amidotransferase subunit PdxT; Provisional Back     alignment and domain information
>PRK13181 hisH imidazole glycerol phosphate synthase subunit HisH; Provisional Back     alignment and domain information
>PRK13143 hisH imidazole glycerol phosphate synthase subunit HisH; Provisional Back     alignment and domain information
>cd01748 GATase1_IGP_Synthase Type 1 glutamine amidotransferase (GATase1) domain found in imidazole glycerol phosphate synthase (IGPS) Back     alignment and domain information
>CHL00188 hisH imidazole glycerol phosphate synthase subunit hisH; Provisional Back     alignment and domain information
>TIGR01855 IMP_synth_hisH imidazole glycerol phosphate synthase, glutamine amidotransferase subunit Back     alignment and domain information
>KOG1622 consensus GMP synthase [Nucleotide transport and metabolism] Back     alignment and domain information
>PRK14004 hisH imidazole glycerol phosphate synthase subunit HisH; Provisional Back     alignment and domain information
>TIGR01737 FGAM_synth_I phosphoribosylformylglycinamidine synthase I Back     alignment and domain information
>cd01749 GATase1_PB Glutamine Amidotransferase (GATase_I) involved in pyridoxine biosynthesis Back     alignment and domain information
>KOG1559 consensus Gamma-glutamyl hydrolase [Coenzyme transport and metabolism] Back     alignment and domain information
>KOG2387 consensus CTP synthase (UTP-ammonia lyase) [Nucleotide transport and metabolism] Back     alignment and domain information
>TIGR03800 PLP_synth_Pdx2 pyridoxal 5'-phosphate synthase, glutaminase subunit Pdx2 Back     alignment and domain information
>PLN02617 imidazole glycerol phosphate synthase hisHF Back     alignment and domain information
>PRK03619 phosphoribosylformylglycinamidine synthase I; Provisional Back     alignment and domain information
>KOG0026 consensus Anthranilate synthase, beta chain [Amino acid transport and metabolism] Back     alignment and domain information
>PRK13142 hisH imidazole glycerol phosphate synthase subunit HisH; Provisional Back     alignment and domain information
>PLN02832 glutamine amidotransferase subunit of pyridoxal 5'-phosphate synthase complex Back     alignment and domain information
>KOG3179 consensus Predicted glutamine synthetase [Nucleotide transport and metabolism] Back     alignment and domain information
>KOG1224 consensus Para-aminobenzoate (PABA) synthase ABZ1 [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>PRK01175 phosphoribosylformylglycinamidine synthase I; Provisional Back     alignment and domain information
>PRK05368 homoserine O-succinyltransferase; Provisional Back     alignment and domain information
>PRK13526 glutamine amidotransferase subunit PdxT; Provisional Back     alignment and domain information
>cd01740 GATase1_FGAR_AT Type 1 glutamine amidotransferase (GATase1)-like domain found in Formylglycinamide ribonucleotide amidotransferase Back     alignment and domain information
>COG0047 PurL Phosphoribosylformylglycinamidine (FGAM) synthase, glutamine amidotransferase domain [Nucleotide transport and metabolism] Back     alignment and domain information
>PF01174 SNO: SNO glutamine amidotransferase family; InterPro: IPR002161 Members of this family are involved in the pyridoxine biosynthetic pathway [, ] Back     alignment and domain information
>COG0311 PDX2 Predicted glutamine amidotransferase involved in pyridoxine biosynthesis [Coenzyme metabolism] Back     alignment and domain information
>PF13507 GATase_5: CobB/CobQ-like glutamine amidotransferase domain; PDB: 3D54_L 3UMM_A 3UJN_A 3UGJ_A 1T3T_A Back     alignment and domain information
>KOG0623 consensus Glutamine amidotransferase/cyclase [Amino acid transport and metabolism] Back     alignment and domain information
>TIGR01857 FGAM-synthase phosphoribosylformylglycinamidine synthase, clade II Back     alignment and domain information
>PLN03206 phosphoribosylformylglycinamidine synthase; Provisional Back     alignment and domain information
>PRK05297 phosphoribosylformylglycinamidine synthase; Provisional Back     alignment and domain information
>TIGR01735 FGAM_synt phosphoribosylformylglycinamidine synthase, single chain form Back     alignment and domain information
>cd03130 GATase1_CobB Type 1 glutamine amidotransferase (GATase1) domain found in Cobyrinic Acid a,c-Diamide Synthase Back     alignment and domain information
>cd01750 GATase1_CobQ Type 1 glutamine amidotransferase (GATase1) domain found in Cobyric Acid Synthase (CobQ) Back     alignment and domain information
>PHA03366 FGAM-synthase; Provisional Back     alignment and domain information
>PRK06278 cobyrinic acid a,c-diamide synthase; Validated Back     alignment and domain information
>TIGR01739 tegu_FGAM_synt herpesvirus tegument protein/v-FGAM-synthase Back     alignment and domain information
>cd03131 GATase1_HTS Type 1 glutamine amidotransferase (GATase1)-like domain found in homoserine trans-succinylase (HTS) Back     alignment and domain information
>PRK01077 cobyrinic acid a,c-diamide synthase; Validated Back     alignment and domain information
>PF04204 HTS: Homoserine O-succinyltransferase ; InterPro: IPR005697 This family of enzymes, homoserine O-succinyltransferase, catalyses the first step in the biosynthesis of methionine: Succinyl-CoA + L-homoserine = CoA + O-succinyl-L-homoserine This enzyme is consequently essential for the survival of bacteria, plants and fungi Back     alignment and domain information
>TIGR00379 cobB cobyrinic acid a,c-diamide synthase Back     alignment and domain information
>KOG3210 consensus Imidazoleglycerol-phosphate synthase subunit H-like [Coenzyme transport and metabolism] Back     alignment and domain information
>cd03146 GAT1_Peptidase_E Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E Back     alignment and domain information
>TIGR01001 metA homoserine O-succinyltransferase Back     alignment and domain information
>PRK13896 cobyrinic acid a,c-diamide synthase; Provisional Back     alignment and domain information
>PF07685 GATase_3: CobB/CobQ-like glutamine amidotransferase domain; InterPro: IPR011698 This group of enzymes was suggested to be related to the MinD family of ATPases involved in regulation of cell division in bacteria and archaea [] Back     alignment and domain information
>KOG1907 consensus Phosphoribosylformylglycinamidine synthase [Nucleotide transport and metabolism] Back     alignment and domain information
>cd01653 GATase1 Type 1 glutamine amidotransferase (GATase1)-like domain Back     alignment and domain information
>PRK00784 cobyric acid synthase; Provisional Back     alignment and domain information
>cd03128 GAT_1 Type 1 glutamine amidotransferase (GATase1)-like domain Back     alignment and domain information
>PRK05282 (alpha)-aspartyl dipeptidase; Validated Back     alignment and domain information
>COG0458 CarB Carbamoylphosphate synthase large subunit (split gene in MJ) [Amino acid transport and metabolism / Nucleotide transport and metabolism] Back     alignment and domain information
>TIGR00313 cobQ cobyric acid synthase CobQ Back     alignment and domain information
>PRK11780 isoprenoid biosynthesis protein with amidotransferase-like domain; Provisional Back     alignment and domain information
>cd03144 GATase1_ScBLP_like Type 1 glutamine amidotransferase (GATase1)-like domain found in proteins similar to Saccharomyces cerevisiae biotin-apoprotein ligase (ScBLP) Back     alignment and domain information
>cd03129 GAT1_Peptidase_E_like Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E_like proteins Back     alignment and domain information
>cd03169 GATase1_PfpI_1 Type 1 glutamine amidotransferase (GATase1)-like domain found in a subgroup of proteins similar to PfpI from Pyrococcus furiosus Back     alignment and domain information
>COG1492 CobQ Cobyric acid synthase [Coenzyme metabolism] Back     alignment and domain information
>cd03134 GATase1_PfpI_like A type 1 glutamine amidotransferase (GATase1)-like domain found in PfpI from Pyrococcus furiosus Back     alignment and domain information
>TIGR01382 PfpI intracellular protease, PfpI family Back     alignment and domain information
>cd03133 GATase1_ES1 Type 1 glutamine amidotransferase (GATase1)-like domain found in zebrafish ES1 Back     alignment and domain information
>COG1797 CobB Cobyrinic acid a,c-diamide synthase [Coenzyme metabolism] Back     alignment and domain information
>COG3442 Predicted glutamine amidotransferase [General function prediction only] Back     alignment and domain information
>cd03145 GAT1_cyanophycinase Type 1 glutamine amidotransferase (GATase1)-like domain found in cyanophycinase Back     alignment and domain information
>cd03132 GATase1_catalase Type 1 glutamine amidotransferase (GATase1)-like domain found in at the C-terminal of several large catalases Back     alignment and domain information
>PRK04155 chaperone protein HchA; Provisional Back     alignment and domain information
>cd03148 GATase1_EcHsp31_like Type 1 glutamine amidotransferase (GATase1)-like domain found in Escherichia coli Hsp31 protein (EcHsp31) Back     alignment and domain information
>PF01965 DJ-1_PfpI: DJ-1/PfpI family; InterPro: IPR002818 This signature defines a diverse group of protein families which include proteins involved in RNA-protein interaction regulation, thiamine biosynthesis, Ras-related signal transduction, and those with protease activity Back     alignment and domain information
>cd03147 GATase1_Ydr533c_like Type 1 glutamine amidotransferase (GATase1)-like domain found in Saccharomyces cerevisiae Ydr533c protein Back     alignment and domain information
>PRK11574 oxidative-stress-resistance chaperone; Provisional Back     alignment and domain information
>cd03137 GATase1_AraC_1 AraC transcriptional regulators having a Type 1 glutamine amidotransferase (GATase1)-like domain Back     alignment and domain information
>COG1897 MetA Homoserine trans-succinylase [Amino acid transport and metabolism] Back     alignment and domain information
>TIGR02069 cyanophycinase cyanophycinase Back     alignment and domain information
>cd03140 GATase1_PfpI_3 Type 1 glutamine amidotransferase (GATase1)-like domain found in a subgroup of proteins similar to PfpI from Pyrococcus furiosus Back     alignment and domain information
>PF03575 Peptidase_S51: Peptidase family S51; InterPro: IPR005320 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families Back     alignment and domain information
>cd03135 GATase1_DJ-1 Type 1 glutamine amidotransferase (GATase1)-like domain found in Human DJ-1 Back     alignment and domain information
>PF09825 BPL_N: Biotin-protein ligase, N terminal; InterPro: IPR019197 The function of this structural domain is unknown Back     alignment and domain information
>cd03141 GATase1_Hsp31_like Type 1 glutamine amidotransferase (GATase1)-like domain found in proteins similar to Escherichia coli Hsp31 protein Back     alignment and domain information
>PRK11249 katE hydroperoxidase II; Provisional Back     alignment and domain information
>COG0693 ThiJ Putative intracellular protease/amidase [General function prediction only] Back     alignment and domain information
>cd03138 GATase1_AraC_2 AraC transcriptional regulators having a Type 1 glutamine amidotransferase (GATase1)-like domain Back     alignment and domain information
>TIGR01383 not_thiJ DJ-1 family protein Back     alignment and domain information
>cd03136 GATase1_AraC_ArgR_like AraC transcriptional regulators having an N-terminal Type 1 glutamine amidotransferase (GATase1)-like domain Back     alignment and domain information
>COG3340 PepE Peptidase E [Amino acid transport and metabolism] Back     alignment and domain information
>TIGR01369 CPSaseII_lrg carbamoyl-phosphate synthase, large subunit Back     alignment and domain information
>cd03139 GATase1_PfpI_2 Type 1 glutamine amidotransferase (GATase1)-like domain found in a subgroup of proteins similar to PfpI from Pyrococcus furiosus Back     alignment and domain information
>PF00289 CPSase_L_chain: Carbamoyl-phosphate synthase L chain, N-terminal domain; InterPro: IPR005481 Carbamoyl phosphate synthase (CPSase) is a heterodimeric enzyme composed of a small and a large subunit (with the exception of CPSase III, see below) Back     alignment and domain information
>PRK12815 carB carbamoyl phosphate synthase large subunit; Reviewed Back     alignment and domain information
>PRK03378 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional Back     alignment and domain information
>PRK03372 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional Back     alignment and domain information
>PLN02735 carbamoyl-phosphate synthase Back     alignment and domain information
>PF13278 DUF4066: Putative amidotransferase; PDB: 3BHN_A 3MGK_B 3NOV_A 3NON_B 3NOO_B 3NOQ_A 3NOR_A 3GRA_A 3EWN_A 3ER6_C Back     alignment and domain information
>PRK09393 ftrA transcriptional activator FtrA; Provisional Back     alignment and domain information
>TIGR00177 molyb_syn molybdenum cofactor synthesis domain Back     alignment and domain information
>PRK05294 carB carbamoyl phosphate synthase large subunit; Reviewed Back     alignment and domain information
>PRK14077 pnk inorganic polyphosphate/ATP-NAD kinase; Provisional Back     alignment and domain information
>PRK01911 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional Back     alignment and domain information
>PRK02649 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional Back     alignment and domain information
>PRK04539 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional Back     alignment and domain information
>PRK01215 competence damage-inducible protein A; Provisional Back     alignment and domain information
>PRK02155 ppnK NAD(+)/NADH kinase family protein; Provisional Back     alignment and domain information
>TIGR02667 moaB_proteo molybdenum cofactor biosynthesis protein B, proteobacterial Back     alignment and domain information
>COG4242 CphB Cyanophycinase and related exopeptidases [Secondary metabolites biosynthesis, transport, and catabolism / Inorganic ion transport and metabolism] Back     alignment and domain information
>cd00758 MoCF_BD MoCF_BD: molybdenum cofactor (MoCF) binding domain (BD) Back     alignment and domain information
>PRK05294 carB carbamoyl phosphate synthase large subunit; Reviewed Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query421
3fij_A254 Crystal Structure Of A Uncharacterized Protein Lin1 5e-19
>pdb|3FIJ|A Chain A, Crystal Structure Of A Uncharacterized Protein Lin1909 Length = 254 Back     alignment and structure 
Iteration: 1

 Score = 92.0 bits (227), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 74/241 (30%), Positives = 109/241 (45%), Gaps = 41/241 (17%)
Query: 27  VDFVGEYHLDLIVSYGAVPVIVPRVTGVHMLLESFEPIHGVLLCEGEDIDPSLYDAELSG 86
           V +  + ++D I   G  P+ +P +      +++   + G+LL  G+DI P LY  E S 
Sbjct: 26  VTYTQQRYVDAIQKVGGFPIALP-IDDPSTAVQAISLVDGLLLTGGQDITPQLYLEEPS- 83
Query: 87  FAPEELEEIRALHASDTAIDKEKDTIELRLAKLCLERNIPYLGICRGSQVLNVACGGTLY 146
                 +EI A           +D+ E+ L +  L+   P   ICRG Q++NVA GGTLY
Sbjct: 84  ------QEIGAYFPP-------RDSYEIALVRAALDAGKPIFAICRGXQLVNVALGGTLY 130
Query: 147 QDIEKEISKNCSLGQRVVHMNYENYDGHRHLVKVVEDTPLHQWFRDSLEENKMEIMVNSY 206
           QDI +  +K     QRV     E    H   ++   +   H         NK   +VNS 
Sbjct: 131 QDISQVETKALQHLQRV----DEQLGSHTIDIEPTSELAKHH-------PNKK--LVNSL 177
Query: 207 HHQGVKKLAQRFVPMAFASDGLIEGFYDPDAYNPQEG----KFIMGLQFHPERMRNQDSD 262
           HHQ +KKLA  F   A  +DG IE           EG     + +G+Q+HPE     D +
Sbjct: 178 HHQFIKKLAPSFKVTARTADGXIEAV---------EGDNLPSWYLGVQWHPELXFQTDPE 228
Query: 263 N 263
           +
Sbjct: 229 S 229

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query421
3fij_A254 LIN1909 protein; 11172J, uncharacterized protein, 8e-80
1l9x_A315 Gamma-glutamyl hydrolase; 1.60A {Homo sapiens} SCO 1e-28
3m3p_A250 Glutamine amido transferase; structural genomics, 1e-07
3l7n_A236 Putative uncharacterized protein; glutamine amidot 1e-07
1o1y_A239 Conserved hypothetical protein TM1158; flavodoxin- 3e-06
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 5e-06
3uow_A 556 GMP synthetase; structural genomics consortium, SG 2e-05
2vxo_A 697 GMP synthase [glutamine-hydrolyzing]; proto-oncoge 3e-05
>3fij_A LIN1909 protein; 11172J, uncharacterized protein, nysgrc, PSI-II, structural genomics, protein structure initiative; 2.30A {Listeria innocua} Length = 254 Back     alignment and structure
 Score =  246 bits (629), Expect = 8e-80
 Identities = 72/281 (25%), Positives = 116/281 (41%), Gaps = 44/281 (15%)

Query: 11  PRVLIVSRRTVRK-----NKFVDFVGEYHLDLIVSYGAVPVIVPRVTGVHMLLESFEPIH 65
           P + I   R V+         V +  + ++D I   G  P+ +P +      +++   + 
Sbjct: 5   PVIGITGNRLVKGVDVFYGHRVTYTQQRYVDAIQKVGGFPIALP-IDDPSTAVQAISLVD 63

Query: 66  GVLLCEGEDIDPSLYDAELSGFAPEELEEIRALHASDTAIDKEKDTIELRLAKLCLERNI 125
           G+LL  G+DI P LY  E                    A    +D+ E+ L +  L+   
Sbjct: 64  GLLLTGGQDITPQLYLEEP--------------SQEIGAYFPPRDSYEIALVRAALDAGK 109

Query: 126 PYLGICRGSQVLNVACGGTLYQDIEKEISKNCSLGQRVVHMNYENYDGHRHLVKVVEDTP 185
           P   ICRG Q++NVA GGTLYQDI +         + + H+   +     H + +   + 
Sbjct: 110 PIFAICRGMQLVNVALGGTLYQDISQV------ETKALQHLQRVDEQLGSHTIDIEPTSE 163

Query: 186 LHQWFRDSLEENKMEIMVNSYHHQGVKKLAQRFVPMAFASDGLIEGFYDPDAYNPQEGKF 245
           L +   +       + +VNS HHQ +KKLA  F   A  +DG+IE     +        +
Sbjct: 164 LAKHHPN-------KKLVNSLHHQFIKKLAPSFKVTARTADGMIEAVEGDNL-----PSW 211

Query: 246 IMGLQFHPERMRNQDSDNFDYPGCKSAYQEFVKAVIAYEKK 286
            +G+Q+HPE M   D      P  +  +Q  V        K
Sbjct: 212 YLGVQWHPELMFQTD------PESEQLFQALVDESKKTMVK 246
>1l9x_A Gamma-glutamyl hydrolase; 1.60A {Homo sapiens} SCOP: c.23.16.1 Length = 315 Back     alignment and structure
>3m3p_A Glutamine amido transferase; structural genomics, nysgrc, PSI-2; HET: MSE; 1.30A {Methylobacillus flagellatus} PDB: 3l83_A* Length = 250 Back     alignment and structure
>3l7n_A Putative uncharacterized protein; glutamine amidotransferase, transferas; 2.70A {Streptococcus mutans} Length = 236 Back     alignment and structure
>1o1y_A Conserved hypothetical protein TM1158; flavodoxin-like fold, structural genomics, joint center for structural genomics, JCSG; 1.70A {Thermotoga maritima} SCOP: c.23.16.1 Length = 239 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>3uow_A GMP synthetase; structural genomics consortium, SGC, purine nucleotide biosy process, ligase; HET: XMP; 2.72A {Plasmodium falciparum} Length = 556 Back     alignment and structure
>2vxo_A GMP synthase [glutamine-hydrolyzing]; proto-oncogene, phosphoprotein, GMP synthetase, guanine monophosphate synthetase, chromosomal rearrangement; HET: XMP; 2.5A {Homo sapiens} Length = 697 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query421
3fij_A254 LIN1909 protein; 11172J, uncharacterized protein, 100.0
1l9x_A315 Gamma-glutamyl hydrolase; 1.60A {Homo sapiens} SCO 99.98
2a9v_A212 GMP synthase; structural genomics, joint center fo 99.98
1qdl_B195 Protein (anthranilate synthase (TRPG-SUBUNIT)); tr 99.97
1wl8_A189 GMP synthase [glutamine-hydrolyzing] subunit A; tr 99.97
2vpi_A218 GMP synthase; guanine monophosphate synthetase, ph 99.97
1i1q_B192 Anthranilate synthase component II; tryptophan bio 99.96
1a9x_B379 Carbamoyl phosphate synthetase (small chain); amid 99.96
1gpm_A 525 GMP synthetase, XMP aminase; class I glutamine ami 99.96
1o1y_A239 Conserved hypothetical protein TM1158; flavodoxin- 99.96
3tqi_A 527 GMP synthase [glutamine-hydrolyzing]; ligase; 2.84 99.95
2ywb_A 503 GMP synthase [glutamine-hydrolyzing]; GMP syntheta 99.95
2w7t_A273 CTP synthetase, putative cytidine triphosphate syn 99.95
3uow_A 556 GMP synthetase; structural genomics consortium, SG 99.95
3nva_A535 CTP synthase; rossman fold, nucleotide binding, LI 99.95
2v4u_A289 CTP synthase 2; pyrimidine biosynthesis, glutamine 99.94
2vxo_A 697 GMP synthase [glutamine-hydrolyzing]; proto-oncoge 99.94
3m3p_A250 Glutamine amido transferase; structural genomics, 99.94
1vco_A550 CTP synthetase; tetramer, riken structural genomic 99.94
3l7n_A236 Putative uncharacterized protein; glutamine amidot 99.93
1s1m_A545 CTP synthase; CTP synthetase, UTP:ammonia ligase ( 99.93
2ywj_A186 Glutamine amidotransferase subunit PDXT; uncharact 99.93
3d54_D213 Phosphoribosylformylglycinamidine synthase 1; alph 99.93
1q7r_A219 Predicted amidotransferase; structural genomics, Y 99.93
3r75_A645 Anthranilate/para-aminobenzoate synthases compone; 99.93
4gud_A211 Imidazole glycerol phosphate synthase subunit His; 99.93
2ywd_A191 Glutamine amidotransferase subunit PDXT; pyridoxin 99.92
2nv0_A196 Glutamine amidotransferase subunit PDXT; 3-layer(A 99.92
1gpw_B201 Amidotransferase HISH; lyase/transferase, complex 99.91
2abw_A227 PDX2 protein, glutaminase; PLP-synthase, vitamin B 99.9
1ka9_H200 Imidazole glycerol phosphtate synthase; riken stru 99.89
2iss_D208 Glutamine amidotransferase subunit PDXT; (beta/alp 99.89
1jvn_A 555 Glutamine, bifunctional histidine biosynthesis pro 99.87
2vdj_A301 Homoserine O-succinyltransferase; methionine biosy 99.73
2h2w_A312 Homoserine O-succinyltransferase; TM0881, (EC 2.3. 99.72
3ugj_A1303 Phosphoribosylformylglycinamidine synthase; amidot 99.29
3l4e_A206 Uncharacterized peptidase LMO0363; hypothetical pr 98.47
1fy2_A229 Aspartyl dipeptidase; serine protease, catalytic t 98.39
1oi4_A193 Hypothetical protein YHBO; PFPI/THIJ family, compl 97.75
2rk3_A197 Protein DJ-1; parkinson'S disease, THIJ, PFPI, cha 97.24
4hcj_A177 THIJ/PFPI domain protein; structural genomics, PSI 97.22
1vhq_A232 Enhancing lycopene biosynthesis protein 2; structu 96.99
3l18_A168 Intracellular protease I; gatase1_PFPI_LIKE, hydro 96.98
2vrn_A190 Protease I, DR1199; cysteine sulfenic acid, DJ-1/T 96.94
4e08_A190 DJ-1 beta; flavodoxin-like fold, stress response, 96.83
2ab0_A205 YAJL; DJ-1/THIJ superfamily, alpha-beta hydrolase 96.79
3f5d_A206 Protein YDEA; unknow protein, PSI-II, nysgrc, stru 96.62
3efe_A212 THIJ/PFPI family protein; structural GEN csgid, ce 96.59
3l3b_A242 ES1 family protein; ssgcid, NIH, niaid, SBRI, UW, 96.56
2fex_A188 Conserved hypothetical protein; structural genomic 96.53
3n7t_A247 Macrophage binding protein; seattle structural gen 96.36
3kkl_A244 Probable chaperone protein HSP33; peptidase, heat 96.14
3en0_A291 Cyanophycinase; serine protease, beta peptide spec 96.13
1rw7_A243 YDR533CP; alpha-beta sandwich, DJ-1/THIJ/PFPI supe 96.05
3er6_A209 Putative transcriptional regulator protein; struct 96.05
3ej6_A688 Catalase-3; heme, hydrogen iron, metal-binding, ox 95.88
3uk7_A396 Class I glutamine amidotransferase-like domain-CO 95.81
3ttv_A753 Catalase HPII; heme orientation, oxidoreductase; H 95.79
3uk7_A396 Class I glutamine amidotransferase-like domain-CO 95.7
3cne_A175 Putative protease I; structural genomics, PSI-2, M 95.53
3gra_A202 Transcriptional regulator, ARAC family; transcript 95.41
3ot1_A208 4-methyl-5(B-hydroxyethyl)-thiazole monophosphate 95.35
3noq_A231 THIJ/PFPI family protein; DJ-1 superfamily, isocya 95.12
2iuf_A688 Catalase; oxidoreductase; HET: HDD NAG; 1.71A {Pen 95.0
3fse_A365 Two-domain protein containing DJ-1/THIJ/PFPI-like 94.69
1sy7_A715 Catalase 1; heme oxidation, singlet oxygen, oxidor 94.47
1u9c_A224 APC35852; structural genomics, protein structure i 94.35
3ewn_A253 THIJ/PFPI family protein; monomer, PSI nysgrc, str 94.21
3mgk_A211 Intracellular protease/amidase related enzyme (THI 92.74
1n57_A291 Chaperone HSP31, protein YEDU; alpha-beta sandwich 92.61
1mkz_A172 Molybdenum cofactor biosynthesis protein B; MAD, W 92.25
3pzy_A164 MOG; ssgcid, seattle structural genomics center fo 90.64
1y5e_A169 Molybdenum cofactor biosynthesis protein B; struct 87.32
3rfq_A185 Pterin-4-alpha-carbinolamine dehydratase MOAB2; st 85.22
2pjk_A178 178AA long hypothetical molybdenum cofactor biosyn 84.74
3bhn_A236 THIJ/PFPI domain protein; structural genomics, joi 81.76
1di6_A195 MOGA, molybdenum cofactor biosynthetic enzyme; MOC 81.54
2an1_A292 Putative kinase; structural genomics, PSI, protein 81.07
>3fij_A LIN1909 protein; 11172J, uncharacterized protein, nysgrc, PSI-II, structural genomics, protein structure initiative; 2.30A {Listeria innocua} Back     alignment and structure
Probab=100.00  E-value=5.1e-44  Score=345.04  Aligned_cols=237  Identities=30%  Similarity=0.454  Sum_probs=190.2

Q ss_pred             CCcEEEEEeccccCc-----ccchhhhhhHHHHHHHHCCCeEEEEcCCCChhhhhhhcCCcCEEEECCCCCCCCCCcccc
Q 041791            9 ILPRVLIVSRRTVRK-----NKFVDFVGEYHLDLIVSYGAVPVIVPRVTGVHMLLESFEPIHGVLLCEGEDIDPSLYDAE   83 (421)
Q Consensus         9 ~~P~igI~~~~~~~~-----~~~~~~v~~~yl~~l~~~Ga~~vivp~~~~~~~l~~~l~~~DGVIL~GG~didp~~y~~~   83 (421)
                      ++|+|||++......     +.-.+|+...|+++|+++|+.|+++|+..+.+ +.+.++.+|||||+||++++|+.|+++
T Consensus         3 ~~p~IGi~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aG~~pv~lp~~~~~~-~~~~l~~~DGlil~GG~~v~P~~yg~~   81 (254)
T 3fij_A            3 LKPVIGITGNRLVKGVDVFYGHRVTYTQQRYVDAIQKVGGFPIALPIDDPST-AVQAISLVDGLLLTGGQDITPQLYLEE   81 (254)
T ss_dssp             CCCEEEEEC------------------CHHHHHHHHHHTCEEEEECCCCGGG-HHHHHHTCSEEEECCCSCCCGGGGTCC
T ss_pred             CCCEEEEeCCcccccccccCCcchhhhhHHHHHHHHHCCCEEEEEeCCCchH-HHHHHhhCCEEEECCCCCCChhhcCCc
Confidence            579999999854321     23467999999999999999999999877655 677778999999999999999999987


Q ss_pred             ccCCChhhHHHHHhhccCccccchhhhHHHHHHHHHHHHcCCCEEEEchhhHHHHHHhCCcccccchhhhccccCCCcee
Q 041791           84 LSGFAPEELEEIRALHASDTAIDKEKDTIELRLAKLCLERNIPYLGICRGSQVLNVACGGTLYQDIEKEISKNCSLGQRV  163 (421)
Q Consensus        84 ~~~~~~e~~~~i~~~~~~~~~~d~~rd~~el~li~~ale~~iPiLGIClG~QlLava~GG~v~~~~~~e~g~~~~~~~~v  163 (421)
                      ..              ++.+.+++.||..++.+++++++.++|+||||+|||+|++++||+++++.....+      ..+
T Consensus        82 ~~--------------~~~~~~~~~rd~~~~~lir~a~~~~~PiLGIC~G~Qll~~a~Gg~v~~~~~~~~~------~~~  141 (254)
T 3fij_A           82 PS--------------QEIGAYFPPRDSYEIALVRAALDAGKPIFAICRGMQLVNVALGGTLYQDISQVET------KAL  141 (254)
T ss_dssp             CC--------------TTCCCCCHHHHHHHHHHHHHHHHTTCCEEEETHHHHHHHHHTTCCEESSGGGSSS------CCC
T ss_pred             cC--------------cccCCcChhhhHHHHHHHHHHHHcCCCEEEECHHHHHHHHHhCCceecccccccC------ccc
Confidence            63              5556678999999999999999999999999999999999999999887532211      224


Q ss_pred             eeccccCCCCceeEEEEccCCcchhhcccccccCceeEEEeccccccccccCCCeEEEEEeCCCeEEEEEeC-CCCCCCC
Q 041791          164 VHMNYENYDGHRHLVKVVEDTPLHQWFRDSLEENKMEIMVNSYHHQGVKKLAQRFVPMAFASDGLIEGFYDP-DAYNPQE  242 (421)
Q Consensus       164 ~H~~~~~~~~~~h~V~i~~~s~L~~~~~~~l~~~~~~~~V~s~H~~~V~~L~~g~~vla~s~dg~ieaie~~-~~~~~~~  242 (421)
                      .|.+......+|+.|.+.+++++++.+++       .+.|+++|++.|+.+|++++++|+++||.||||+++ +      
T Consensus       142 ~h~~~~~~~~g~~~v~~~~~s~l~~~~~~-------~~~v~~~H~~~v~~l~~g~~v~a~s~dg~ieai~~~~~------  208 (254)
T 3fij_A          142 QHLQRVDEQLGSHTIDIEPTSELAKHHPN-------KKLVNSLHHQFIKKLAPSFKVTARTADGMIEAVEGDNL------  208 (254)
T ss_dssp             CCBCCSCTTSCCEEEEECTTSSGGGTCCT-------TEEECCBCSCEESSCCSSEEEEEEETTCCEEEEEESSC------
T ss_pred             cccCCCCCccceEEEEeCCCChHHHhcCC-------cEEEEEeccchhhccCCCcEEEEEeCCCcEEEEEecCC------
Confidence            45544445677999999999999998876       688999999999999999999999999999999998 6      


Q ss_pred             CCcEEEEccccCccCCCCCCCCCCchhhHHHHHHHHHHHHHHH
Q 041791          243 GKFIMGLQFHPERMRNQDSDNFDYPGCKSAYQEFVKAVIAYEK  285 (421)
Q Consensus       243 ~~~i~GvQFHPE~~~~~~~~~~d~~~~~~lf~~Fv~a~~~~~~  285 (421)
                      +++++|||||||++.++..      ...++|++|+++|++++.
T Consensus       209 ~~~~~gvQfHPE~~~~~~~------~~~~lf~~Fv~~~~~~~~  245 (254)
T 3fij_A          209 PSWYLGVQWHPELMFQTDP------ESEQLFQALVDESKKTMV  245 (254)
T ss_dssp             SSCEEEESSCGGGTGGGCH------HHHHHHHHHHHHHHSCC-
T ss_pred             CCeEEEEEcCCccCCCCCc------hHHHHHHHHHHHHHHHHh
Confidence            3569999999999875322      136899999999876543
>1l9x_A Gamma-glutamyl hydrolase; 1.60A {Homo sapiens} SCOP: c.23.16.1 Back     alignment and structure
>2a9v_A GMP synthase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, ligase; 2.24A {Thermoplasma acidophilum} SCOP: c.23.16.1 Back     alignment and structure
>1qdl_B Protein (anthranilate synthase (TRPG-SUBUNIT)); tryptophan biosynthesis, glutamine amidotransferase, allosteric interaction, lyase; 2.50A {Sulfolobus solfataricus} SCOP: c.23.16.1 Back     alignment and structure
>1wl8_A GMP synthase [glutamine-hydrolyzing] subunit A; transferase, gatases, riken structural genomics/proteomics initiative, RSGI; 1.45A {Pyrococcus horikoshii} SCOP: c.23.16.1 PDB: 2d7j_A Back     alignment and structure
>2vpi_A GMP synthase; guanine monophosphate synthetase, phosphoprotein, GMP synthetase, GMP biosynthesis, glutamine amidotransferase, ligase, cytoplasm; 2.40A {Homo sapiens} Back     alignment and structure
>1i1q_B Anthranilate synthase component II; tryptophan biosynthesis, lyase; HET: TRP; 1.90A {Salmonella typhimurium} SCOP: c.23.16.1 PDB: 1i7q_B 1i7s_B* Back     alignment and structure
>1a9x_B Carbamoyl phosphate synthetase (small chain); amidotransferase, thioester; HET: CYG ADP; 1.80A {Escherichia coli} SCOP: c.8.3.1 c.23.16.1 PDB: 1bxr_B* 1ce8_B* 1jdb_C* 1cs0_B* 1m6v_B* 1c30_B* 1c3o_B* 1kee_B* 1t36_B* Back     alignment and structure
>1gpm_A GMP synthetase, XMP aminase; class I glutamine amidotransferase, N-type ATP pyrophosphata transferase (glutamine amidotransferase); HET: AMP CIT; 2.20A {Escherichia coli} SCOP: c.23.16.1 c.26.2.1 d.52.2.1 Back     alignment and structure
>1o1y_A Conserved hypothetical protein TM1158; flavodoxin-like fold, structural genomics, joint center for structural genomics, JCSG; 1.70A {Thermotoga maritima} SCOP: c.23.16.1 Back     alignment and structure
>3tqi_A GMP synthase [glutamine-hydrolyzing]; ligase; 2.84A {Coxiella burnetii} Back     alignment and structure
>2ywb_A GMP synthase [glutamine-hydrolyzing]; GMP synthetase, XMP binding, ATP binding, purine nucleotide biosynthetic pathway, structural genomics; 2.10A {Thermus thermophilus} PDB: 2ywc_A* Back     alignment and structure
>2w7t_A CTP synthetase, putative cytidine triphosphate synthase; glutaminase domain, trypsanosoma brucei, ligase, acivicin; HET: 5CS; 2.10A {Trypanosoma brucei} Back     alignment and structure
>3uow_A GMP synthetase; structural genomics consortium, SGC, purine nucleotide biosy process, ligase; HET: XMP; 2.72A {Plasmodium falciparum} Back     alignment and structure
>3nva_A CTP synthase; rossman fold, nucleotide binding, LIG; 2.50A {Sulfolobus solfataricus} Back     alignment and structure
>2v4u_A CTP synthase 2; pyrimidine biosynthesis, glutamine amidotransferase, glutaminase domain, 5-OXO-L-norleucine, DON, ligase, phosphoprotein; HET: CYD; 2.3A {Homo sapiens} PDB: 2vkt_A Back     alignment and structure
>2vxo_A GMP synthase [glutamine-hydrolyzing]; proto-oncogene, phosphoprotein, GMP synthetase, guanine monophosphate synthetase, chromosomal rearrangement; HET: XMP; 2.5A {Homo sapiens} Back     alignment and structure
>3m3p_A Glutamine amido transferase; structural genomics, nysgrc, PSI-2; HET: MSE; 1.30A {Methylobacillus flagellatus} PDB: 3l83_A* Back     alignment and structure
>1vco_A CTP synthetase; tetramer, riken structural genomics/proteomics initiative, RSGI, structural genomics, ligase; HET: GLN; 2.15A {Thermus thermophilus} SCOP: c.23.16.1 c.37.1.10 PDB: 1vcn_A 1vcm_A Back     alignment and structure
>3l7n_A Putative uncharacterized protein; glutamine amidotransferase, transferas; 2.70A {Streptococcus mutans} Back     alignment and structure
>1s1m_A CTP synthase; CTP synthetase, UTP:ammonia ligase (ADP-forming), cytidine 5 triphosphate synthase, ammonia lyase; 2.30A {Escherichia coli} SCOP: c.23.16.1 c.37.1.10 PDB: 2ad5_A* Back     alignment and structure
>2ywj_A Glutamine amidotransferase subunit PDXT; uncharacterized conserved protein, structural genomics; 1.90A {Methanocaldococcus jannaschii} Back     alignment and structure
>3d54_D Phosphoribosylformylglycinamidine synthase 1; alpha-beta structure, ATP-binding, cytoplasm, ligase, nucleotide-binding, purine biosynthesis; HET: CYG ADP; 3.50A {Thermotoga maritima} Back     alignment and structure
>1q7r_A Predicted amidotransferase; structural genomics, YAAE, PDX2, predicted glutamine amidotransferase, PSI; HET: MSE; 1.90A {Geobacillus stearothermophilus} SCOP: c.23.16.1 Back     alignment and structure
>3r75_A Anthranilate/para-aminobenzoate synthases compone; ammonia channel, chorismate, type 1 glutamine amidotransfera phenazine biosynthesis, lyase; HET: CYG; 2.10A {Burkholderia SP} PDB: 3r74_A* 3r76_A* Back     alignment and structure
>4gud_A Imidazole glycerol phosphate synthase subunit His; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE 1PE; 1.91A {Vibrio cholerae} Back     alignment and structure
>2ywd_A Glutamine amidotransferase subunit PDXT; pyridoxine biosynthesis, structural genomics, NPPSFA; 1.90A {Thermus thermophilus} Back     alignment and structure
>2nv0_A Glutamine amidotransferase subunit PDXT; 3-layer(ABA) sandwich, rossmann fold, glutaminase; 1.73A {Bacillus subtilis} SCOP: c.23.16.1 PDB: 1r9g_A 2nv2_B* Back     alignment and structure
>1gpw_B Amidotransferase HISH; lyase/transferase, complex (lyase/transferase), histidine biosynthesis, glutaminase, glutamine amidotransferase; 2.4A {Thermotoga maritima} SCOP: c.23.16.1 PDB: 1k9v_F 1kxj_A 2wjz_B Back     alignment and structure
>2abw_A PDX2 protein, glutaminase; PLP-synthase, vitamin B6, malaria, transferase; HET: PG4; 1.62A {Plasmodium falciparum} SCOP: c.23.16.1 PDB: 4ads_G Back     alignment and structure
>1ka9_H Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.23.16.1 Back     alignment and structure
>2iss_D Glutamine amidotransferase subunit PDXT; (beta/alpha)8-barrel, alpha/beta three layer sandwich, lyase transferase; HET: 5RP; 2.90A {Thermotoga maritima} Back     alignment and structure
>1jvn_A Glutamine, bifunctional histidine biosynthesis protein hishf; substrate channeling, amidotransferase, TIM-barrel AS A SUBS tunnel; HET: 143; 2.10A {Saccharomyces cerevisiae} SCOP: c.1.2.1 c.23.16.1 PDB: 1ox4_B* 1ox5_A* 1ox6_A 1ox4_A Back     alignment and structure
>2vdj_A Homoserine O-succinyltransferase; methionine biosynthesis, amino-acid biosynthesis, homoserine transacetylase, homoserine transsuccinylase; 2.00A {Bacillus cereus} PDB: 2ghr_A Back     alignment and structure
>2h2w_A Homoserine O-succinyltransferase; TM0881, (EC 2.3.1.46), HOM O-transsuccinylase, HTS, (TM0881), structural genomics; 2.52A {Thermotoga maritima} Back     alignment and structure
>3ugj_A Phosphoribosylformylglycinamidine synthase; amidotransferase, glutaminase, thioester intermediate, ligas; HET: ADP; 1.78A {Salmonella enterica subsp} PDB: 1t3t_A* 3ujn_A* 3umm_A* Back     alignment and structure
>3l4e_A Uncharacterized peptidase LMO0363; hypothetical protein LMO0363, csgid, similar to peptidase E, hydrolase, protease, serine protease; HET: MSE; 1.50A {Listeria monocytogenes} Back     alignment and structure
>1fy2_A Aspartyl dipeptidase; serine protease, catalytic triad, strand-helix MO hydrolase; 1.20A {Salmonella typhimurium} SCOP: c.23.16.4 PDB: 1fye_A Back     alignment and structure
>1oi4_A Hypothetical protein YHBO; PFPI/THIJ family, complete proteome, PFPI, THIJ, bacterial targets at IGS-CNRS, france, BIGS, structural genomics; 2.03A {Escherichia coli} SCOP: c.23.16.2 Back     alignment and structure
>2rk3_A Protein DJ-1; parkinson'S disease, THIJ, PFPI, chaperone, cytoplasm, disease mutation, nucleus, oncogene, oxidation, parkinson disease; 1.05A {Homo sapiens} PDB: 1pdv_A 1pdw_A 3cy6_A 1pe0_A 3cza_A 3cyf_A 2rk4_A 3cz9_A* 3ezg_A 3f71_A 3sf8_A 1p5f_A 1ps4_A 1q2u_A 1soa_A 1ucf_A 2or3_A 3bwe_A 3b38_A 3b36_A ... Back     alignment and structure
>4hcj_A THIJ/PFPI domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta-alpha sandwich; HET: MSE; 1.12A {Brachyspira murdochii} Back     alignment and structure
>1vhq_A Enhancing lycopene biosynthesis protein 2; structural genomics, unknown function; 1.65A {Escherichia coli} SCOP: c.23.16.2 PDB: 1oy1_A Back     alignment and structure
>3l18_A Intracellular protease I; gatase1_PFPI_LIKE, hydrolase; 1.78A {Thermococcus onnurineus} SCOP: c.23.16.2 PDB: 1g2i_A Back     alignment and structure
>2vrn_A Protease I, DR1199; cysteine sulfenic acid, DJ-1/THIJ/PFPI superfamily, protease hydrolase, stress response; 2.15A {Deinococcus radiodurans} Back     alignment and structure
>4e08_A DJ-1 beta; flavodoxin-like fold, stress response, motor protein; 2.00A {Drosophila melanogaster} Back     alignment and structure
>2ab0_A YAJL; DJ-1/THIJ superfamily, alpha-beta hydrolase fold, unknown function; 1.10A {Escherichia coli} SCOP: c.23.16.2 Back     alignment and structure
>3f5d_A Protein YDEA; unknow protein, PSI-II, nysgrc, structural genomics, protein structure initiative; 2.06A {Bacillus subtilis} Back     alignment and structure
>3efe_A THIJ/PFPI family protein; structural GEN csgid, center for structural genomics of infectious disease chaperone; 2.30A {Bacillus anthracis} Back     alignment and structure
>3l3b_A ES1 family protein; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography, isopr biosynthesis; 1.90A {Ehrlichia chaffeensis} Back     alignment and structure
>2fex_A Conserved hypothetical protein; structural genomics, protein structure initiative, PSI, MIDW center for structural genomics, MCSG; 1.70A {Agrobacterium tumefaciens} SCOP: c.23.16.2 Back     alignment and structure
>3n7t_A Macrophage binding protein; seattle structural genomics center for infectious disease, S macrophage, pathogenic fungus, coccidioidomycosis; 2.10A {Coccidioides immitis} SCOP: c.23.16.0 Back     alignment and structure
>3kkl_A Probable chaperone protein HSP33; peptidase, heat shock protein, hydrolase, protease, stress response; 2.03A {Saccharomyces cerevisiae} PDB: 3mii_A* Back     alignment and structure
>3en0_A Cyanophycinase; serine protease, beta peptide specific, hydrolase, protease; 1.50A {Synechocystis SP} Back     alignment and structure
>1rw7_A YDR533CP; alpha-beta sandwich, DJ-1/THIJ/PFPI superfamily, unknown function; 1.80A {Saccharomyces cerevisiae} SCOP: c.23.16.2 PDB: 1qvv_A* 1qvz_A 1qvw_A Back     alignment and structure
>3er6_A Putative transcriptional regulator protein; structural genomics, unknown function, DNA-binding, transcription regulation, PSI-2; 1.90A {Vibrio parahaemolyticus} Back     alignment and structure
>3ej6_A Catalase-3; heme, hydrogen iron, metal-binding, oxidoreductase, peroxidase; HET: NAG HEM; 2.30A {Neurospora crassa} Back     alignment and structure
>3uk7_A Class I glutamine amidotransferase-like domain-CO protein; rossmann fold, cytosol; 2.05A {Arabidopsis thaliana} Back     alignment and structure
>3ttv_A Catalase HPII; heme orientation, oxidoreductase; HET: HEM; 1.45A {Escherichia coli} PDB: 3ttt_A* 1gge_A* 1iph_A* 4ens_A* 3ttu_A* 3p9p_A* 4enq_A* 1p81_A* 3ttx_A* 4enw_A* 3ttw_A* 4ent_A* 1qws_A* 1cf9_A* 1p80_A* 1qf7_A* 4enu_A* 4enp_A* 1gg9_A* 1ggf_A* ... Back     alignment and structure
>3uk7_A Class I glutamine amidotransferase-like domain-CO protein; rossmann fold, cytosol; 2.05A {Arabidopsis thaliana} Back     alignment and structure
>3cne_A Putative protease I; structural genomics, PSI-2, MCSG, protein struct initiative, midwest center for structural genomics; HET: FMN; 1.99A {Bacteroides thetaiotaomicron vpi-5482} Back     alignment and structure
>3gra_A Transcriptional regulator, ARAC family; transcription regulator, PSI-II, structural genomics structure initiative; 2.30A {Pseudomonas putida} Back     alignment and structure
>3ot1_A 4-methyl-5(B-hydroxyethyl)-thiazole monophosphate biosynthesis enzyme; csgid, structural genomics; HET: MSE CSX; 1.16A {Vibrio cholerae o1 biovar el tor} SCOP: c.23.16.0 Back     alignment and structure
>3noq_A THIJ/PFPI family protein; DJ-1 superfamily, isocyanide hydratase, isonitrIle hydratase; HET: NHE; 1.00A {Pseudomonas fluorescens} PDB: 3noo_A 3non_A 3nor_A* 3nov_A Back     alignment and structure
>2iuf_A Catalase; oxidoreductase; HET: HDD NAG; 1.71A {Penicillium janthinellum} PDB: 2xf2_A* Back     alignment and structure
>3fse_A Two-domain protein containing DJ-1/THIJ/PFPI-like ferritin-like domains; structural genomics; HET: MSE CSX; 1.90A {Anabaena variabilis atcc 29413} Back     alignment and structure
>1sy7_A Catalase 1; heme oxidation, singlet oxygen, oxidoreductase; HET: HDD HEM; 1.75A {Neurospora crassa} SCOP: c.23.16.3 Back     alignment and structure
>1u9c_A APC35852; structural genomics, protein structure initiative, MCSG, PAR disease, chaperone, cysteine protease, PSI; 1.35A {Geobacillus stearothermophilus} SCOP: c.23.16.2 Back     alignment and structure
>3ewn_A THIJ/PFPI family protein; monomer, PSI nysgrc, structural genomics, protein structure initiative; 1.65A {Pseudomonas syringae PV} Back     alignment and structure
>3mgk_A Intracellular protease/amidase related enzyme (THIJ family); amidotranferase-like, structural genomics, PSI; 2.00A {Clostridium acetobutylicum} Back     alignment and structure
>1n57_A Chaperone HSP31, protein YEDU; alpha-beta sandwich; 1.60A {Escherichia coli} SCOP: c.23.16.2 PDB: 1pv2_A 1izy_A 1ons_A 1izz_A Back     alignment and structure
>1mkz_A Molybdenum cofactor biosynthesis protein B; MAD, WEAK anomalous signal, molybdopterin synthesis, structural genomics, PSI; HET: MSE; 1.60A {Escherichia coli} SCOP: c.57.1.1 PDB: 1r2k_B Back     alignment and structure
>3pzy_A MOG; ssgcid, seattle structural genomics center for infectious DI biosynthetic protein; 1.80A {Mycobacterium avium subsp} PDB: 3oi9_A 2g4r_A Back     alignment and structure
>1y5e_A Molybdenum cofactor biosynthesis protein B; structural genomics, protein structure initiative, PSI, MCSG, midwest center for structural genomics; 1.90A {Bacillus cereus} SCOP: c.57.1.1 Back     alignment and structure
>3rfq_A Pterin-4-alpha-carbinolamine dehydratase MOAB2; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: B3P; 2.25A {Mycobacterium marinum} PDB: 3tcr_A Back     alignment and structure
>3bhn_A THIJ/PFPI domain protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 1.76A {Shewanella loihica pv-4} Back     alignment and structure
>1di6_A MOGA, molybdenum cofactor biosynthetic enzyme; MOCO, MOCO biosynthesis, gephyrin function; 1.45A {Escherichia coli} SCOP: c.57.1.1 PDB: 1di7_A Back     alignment and structure
>2an1_A Putative kinase; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG, transferase; 2.00A {Salmonella typhimurium} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 421
d1l9xa_288 c.23.16.1 (A:) gamma-glutamyl hydrolase {Human (Ho 1e-20
d1s1ma1258 c.23.16.1 (A:287-544) CTP synthase PyrG, C-termina 2e-08
d1vcoa1250 c.23.16.1 (A:298-547) CTP synthase PyrG, C-termina 8e-07
d1a9xb2228 c.23.16.1 (B:1653-1880) Carbamoyl phosphate synthe 3e-06
d2a9va1196 c.23.16.1 (A:1-196) GMP synthase subunit A, GuaAA 0.003
>d1l9xa_ c.23.16.1 (A:) gamma-glutamyl hydrolase {Human (Homo sapiens) [TaxId: 9606]} Length = 288 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: Class I glutamine amidotransferase-like
family: Class I glutamine amidotransferases (GAT)
domain: gamma-glutamyl hydrolase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 89.6 bits (221), Expect = 1e-20
 Identities = 38/228 (16%), Positives = 71/228 (31%), Gaps = 36/228 (15%)

Query: 29  FVGEYHLDLIVSYGAVPVIVPRVTGVHMLLESFEPIHGVLLCE-GEDIDPSLYDAELSGF 87
           ++   ++  + S GA  V V            F+ I+G+L      D+  S Y       
Sbjct: 25  YIAASYVKYLESAGARVVPVRLDLTEKDYEILFKSINGILFPGGSVDLRRSDYA------ 78

Query: 88  APEELEEIRALHASDTAIDKEKDTIELRLAKLCLERNIPYLGICRGSQVLNVACGGTLYQ 147
                                K    L +         P  G C G + L++   G    
Sbjct: 79  ------------------KVAKIFYNLSIQSFDDGDYFPVWGTCLGFEELSLLISGECLL 120

Query: 148 DIEKEISKNCSLGQRVVHMNYENYDGHRHLVKVVEDTPLHQWFRDSLEENKMEIMVNSYH 207
                +          + +N+     H  + +      L     + L  N  +  ++  +
Sbjct: 121 TATDTVDVA-------MPLNFTGGQLHSRMFQNFPTELLLSLAVEPLTANFHKWSLSVKN 173

Query: 208 HQGVKKLAQRFVPMAFASDGLIEGFYDPDAYNPQEGKFIMGLQFHPER 255
               +KL + F  +   +DG IE     + Y       + G+Q+HPE+
Sbjct: 174 FTMNEKLKKFFNVLTTNTDGKIEFISTMEGYK----YPVYGVQWHPEK 217
>d1s1ma1 c.23.16.1 (A:287-544) CTP synthase PyrG, C-terminal domain {Escherichia coli [TaxId: 562]} Length = 258 Back     information, alignment and structure
>d1vcoa1 c.23.16.1 (A:298-547) CTP synthase PyrG, C-terminal domain {Thermus thermophilus [TaxId: 274]} Length = 250 Back     information, alignment and structure
>d1a9xb2 c.23.16.1 (B:1653-1880) Carbamoyl phosphate synthetase, small subunit C-terminal domain {Escherichia coli [TaxId: 562]} Length = 228 Back     information, alignment and structure
>d2a9va1 c.23.16.1 (A:1-196) GMP synthase subunit A, GuaAA {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Length = 196 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query421
d1l9xa_288 gamma-glutamyl hydrolase {Human (Homo sapiens) [Ta 100.0
d2a9va1196 GMP synthase subunit A, GuaAA {Archaeon Thermoplas 99.97
d1wl8a1188 GMP synthase subunit A, GuaAA {Archaeon Pyrococcus 99.97
d1s1ma1258 CTP synthase PyrG, C-terminal domain {Escherichia 99.96
d1a9xb2228 Carbamoyl phosphate synthetase, small subunit C-te 99.96
d1vcoa1250 CTP synthase PyrG, C-terminal domain {Thermus ther 99.95
d1i7qb_192 Anthranilate synthase GAT subunit, TrpG {Serratia 99.95
d1qdlb_195 Anthranilate synthase GAT subunit, TrpG {Archaeon 99.95
d1gpma2205 GMP synthetase {Escherichia coli [TaxId: 562]} 99.94
d1o1ya_230 Hypothetical protein TM1158 {Thermotoga maritima [ 99.93
d2nv0a1195 Hypothetical protein YaaE {Bacillus subtilis [TaxI 99.9
d1q7ra_202 Hypothetical protein YaaE {Bacillus stearothermoph 99.87
d2abwa1218 Pyridoxine biosynthesis protein 2, Pdx2 {Malaria p 99.85
d1jvna2232 GAT subunit, HisH, (or domain) of imidazoleglycero 99.79
d1k9vf_200 GAT subunit, HisH, (or domain) of imidazoleglycero 99.78
d1ka9h_195 GAT subunit, HisH, (or domain) of imidazoleglycero 99.72
d2ghra1281 Homoserine O-succinyltransferase HTS (MetA) {Bacil 99.59
d1t3ta2262 FGAM synthase PurL, amidotransferase domain {Salmo 99.44
d1a9xa4121 Carbamoyl phosphate synthetase (CPS), large subuni 98.54
d1a9xa3127 Carbamoyl phosphate synthetase (CPS), large subuni 98.02
d1vhqa_217 Putative sigma cross-reacting protein 27A (SCRP-27 96.91
d1p80a1156 Catalase, C-terminal domain {Escherichia coli, HPI 96.91
d1oi4a1170 Hypothetical protein YhbO {Escherichia coli [TaxId 96.59
d1sy7a1184 Catalase, C-terminal domain {Neurospora crassa [Ta 96.41
d1u9ca_221 GK2698 ortholog {Bacillus stearothermophilus [TaxI 96.18
d1g2ia_166 Intracellular protease {Archaeon Pyrococcus horiko 96.14
d1p5fa_186 DJ-1 {Human (Homo sapiens) [TaxId: 9606]} 96.1
d2fexa1188 Hypothetical protein Atu0886 {Agrobacterium tumefa 94.0
d1qvwa_236 Hypothetical protein Ydr533Cp {Baker's yeast (Sacc 92.94
d1a9xa4121 Carbamoyl phosphate synthetase (CPS), large subuni 92.93
d2ab0a1195 Protein ThiJ (YajL) {Escherichia coli [TaxId: 562] 92.59
d1n57a_279 HSP31 (HchA; YedU) {Escherichia coli [TaxId: 562]} 91.52
d1fyea_229 Aspartyl dipeptidase PepE {Salmonella typhimurium 88.86
d1wu2a3144 MoeA, central domain {Pyrococcus horikoshii, PH164 88.27
d1uz5a3148 MoeA, central domain {Archaeon Pyrococcus horikosh 84.18
d2ftsa3155 Gephyrin, domain 5 {Rat (Rattus norvegicus) [TaxId 82.99
d1u0ta_302 Inorganic polyphosphate/ATP-NAD kinase PpnK {Mycob 81.16
>d1l9xa_ c.23.16.1 (A:) gamma-glutamyl hydrolase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: Class I glutamine amidotransferase-like
family: Class I glutamine amidotransferases (GAT)
domain: gamma-glutamyl hydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.4e-35  Score=288.51  Aligned_cols=204  Identities=20%  Similarity=0.236  Sum_probs=149.6

Q ss_pred             CCcEEEEEeccccCc---ccchhhhhhHHHHHHHHCCCeEEEEcCCCChhhhhhhcCCcCEEEECCCC-CCCCCCccccc
Q 041791            9 ILPRVLIVSRRTVRK---NKFVDFVGEYHLDLIVSYGAVPVIVPRVTGVHMLLESFEPIHGVLLCEGE-DIDPSLYDAEL   84 (421)
Q Consensus         9 ~~P~igI~~~~~~~~---~~~~~~v~~~yl~~l~~~Ga~~vivp~~~~~~~l~~~l~~~DGVIL~GG~-didp~~y~~~~   84 (421)
                      .||+|||++++....   +...+|++++|+++|+++||+|++||++.+.+++.+.|+.+||||||||+ +++|+.|.   
T Consensus         2 ~kPiIGI~~~~~~~~~~~~~~~~yi~~sYvk~ie~aGa~vvpi~~~~~~~~~~~~l~~idGillpGG~~~~~~~~~~---   78 (288)
T d1l9xa_           2 KKPIIGILMQKCRNKVMKNYGRYYIAASYVKYLESAGARVVPVRLDLTEKDYEILFKSINGILFPGGSVDLRRSDYA---   78 (288)
T ss_dssp             CCCEEEEECEECCSHHHHTTCSEEEEHHHHHHHHHTTCEEEEECSSCCHHHHHHHHHHSSEEEECCCCCCTTTCHHH---
T ss_pred             CCCEEEEeCCcccCcccccchHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHhhcCCeEecCCCCCccccccc---
Confidence            589999999865432   22347899999999999999999999999999988889999999999997 77776553   


Q ss_pred             cCCChhhHHHHHhhccCccccchhhhHHHHHHHHHHHHcCCCEEEEchhhHHHHHHhCCcccccchhhhccccCCCceee
Q 041791           85 SGFAPEELEEIRALHASDTAIDKEKDTIELRLAKLCLERNIPYLGICRGSQVLNVACGGTLYQDIEKEISKNCSLGQRVV  164 (421)
Q Consensus        85 ~~~~~e~~~~i~~~~~~~~~~d~~rd~~el~li~~ale~~iPiLGIClG~QlLava~GG~v~~~~~~e~g~~~~~~~~v~  164 (421)
                                           +..|+.+++.+.+.+.++++|+||||+|||+|++++||++.++.....+.         
T Consensus        79 ---------------------~~~r~~~~~~l~~~~~~~~~PilGIC~G~Qll~~~~gG~~~~~~~~~~~~---------  128 (288)
T d1l9xa_          79 ---------------------KVAKIFYNLSIQSFDDGDYFPVWGTCLGFEELSLLISGECLLTATDTVDV---------  128 (288)
T ss_dssp             ---------------------HHHHHHHHHHHHHHHTTCCCCEEEETHHHHHHHHHHHSSCCCEEEEEEEE---------
T ss_pred             ---------------------ccchHHHHHHHHHHHhhCCCCeEEEcHHHHHHHHHhCCEeeccccCcCCc---------
Confidence                                 34567788888888888899999999999999999999988765332221         


Q ss_pred             eccccCCCCceeEEEEcc---CCcchhhcccccccC-ceeEEEeccccccc--------cccCCCeEEEEEeCCCe---E
Q 041791          165 HMNYENYDGHRHLVKVVE---DTPLHQWFRDSLEEN-KMEIMVNSYHHQGV--------KKLAQRFVPMAFASDGL---I  229 (421)
Q Consensus       165 H~~~~~~~~~~h~V~i~~---~s~L~~~~~~~l~~~-~~~~~V~s~H~~~V--------~~L~~g~~vla~s~dg~---i  229 (421)
                                ..++....   .+.++...+..+... .....++++|+++|        ..++.+++++|++.||.   |
T Consensus       129 ----------~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~H~~~v~~~~~~~~~~l~~~~~v~a~s~d~~~e~I  198 (288)
T d1l9xa_         129 ----------AMPLNFTGGQLHSRMFQNFPTELLLSLAVEPLTANFHKWSLSVKNFTMNEKLKKFFNVLTTNTDGKIEFI  198 (288)
T ss_dssp             ----------EECCEECSTTTTCSTTTTSCHHHHHHHHHSCCEEEEEEEECBHHHHHTCHHHHHHEEEEEEEESSSCEEE
T ss_pred             ----------ceeEEecCCCccceeEeecccchhhhccCCceEEEecccEEEecccchhhhcCCceEEEEEECCCCeEEE
Confidence                      11111111   122333222211110 01234677899988        35789999999998885   5


Q ss_pred             EEEEeCCCCCCCCCCcEEEEccccCccCCCCCC
Q 041791          230 EGFYDPDAYNPQEGKFIMGLQFHPERMRNQDSD  262 (421)
Q Consensus       230 eaie~~~~~~~~~~~~i~GvQFHPE~~~~~~~~  262 (421)
                      +++++++       .|++|||||||++......
T Consensus       199 ~~ie~~~-------~pi~GvQfHPEk~~fE~~~  224 (288)
T d1l9xa_         199 STMEGYK-------YPVYGVQWHPEKAPYEWKN  224 (288)
T ss_dssp             EEEEESS-------SCEEEESSCTTHHHHCCSS
T ss_pred             EEEEcCC-------CcEEEEEcCCCCCCccccc
Confidence            5556765       6899999999987765543
>d2a9va1 c.23.16.1 (A:1-196) GMP synthase subunit A, GuaAA {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Back     information, alignment and structure
>d1s1ma1 c.23.16.1 (A:287-544) CTP synthase PyrG, C-terminal domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1a9xb2 c.23.16.1 (B:1653-1880) Carbamoyl phosphate synthetase, small subunit C-terminal domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1vcoa1 c.23.16.1 (A:298-547) CTP synthase PyrG, C-terminal domain {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1i7qb_ c.23.16.1 (B:) Anthranilate synthase GAT subunit, TrpG {Serratia marcescens [TaxId: 615]} Back     information, alignment and structure
>d1qdlb_ c.23.16.1 (B:) Anthranilate synthase GAT subunit, TrpG {Archaeon Sulfolobus solfataricus [TaxId: 2287]} Back     information, alignment and structure
>d1gpma2 c.23.16.1 (A:3-207) GMP synthetase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1o1ya_ c.23.16.1 (A:) Hypothetical protein TM1158 {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d2nv0a1 c.23.16.1 (A:1-195) Hypothetical protein YaaE {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1q7ra_ c.23.16.1 (A:) Hypothetical protein YaaE {Bacillus stearothermophilus [TaxId: 1422]} Back     information, alignment and structure
>d2abwa1 c.23.16.1 (A:2-219) Pyridoxine biosynthesis protein 2, Pdx2 {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} Back     information, alignment and structure
>d1k9vf_ c.23.16.1 (F:) GAT subunit, HisH, (or domain) of imidazoleglycerolphosphate synthase HisF {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1ka9h_ c.23.16.1 (H:) GAT subunit, HisH, (or domain) of imidazoleglycerolphosphate synthase HisF {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d2ghra1 c.23.16.8 (A:17-297) Homoserine O-succinyltransferase HTS (MetA) {Bacillus cereus [TaxId: 1396]} Back     information, alignment and structure
>d1t3ta2 c.23.16.1 (A:1034-1295) FGAM synthase PurL, amidotransferase domain {Salmonella typhimurium [TaxId: 90371]} Back     information, alignment and structure
>d1a9xa4 c.30.1.1 (A:556-676) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1a9xa3 c.30.1.1 (A:1-127) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1vhqa_ c.23.16.2 (A:) Putative sigma cross-reacting protein 27A (SCRP-27A, EllB) {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1p80a1 c.23.16.3 (A:598-753) Catalase, C-terminal domain {Escherichia coli, HPII [TaxId: 562]} Back     information, alignment and structure
>d1oi4a1 c.23.16.2 (A:23-192) Hypothetical protein YhbO {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1sy7a1 c.23.16.3 (A:553-736) Catalase, C-terminal domain {Neurospora crassa [TaxId: 5141]} Back     information, alignment and structure
>d1u9ca_ c.23.16.2 (A:) GK2698 ortholog {Bacillus stearothermophilus [TaxId: 1422]} Back     information, alignment and structure
>d1g2ia_ c.23.16.2 (A:) Intracellular protease {Archaeon Pyrococcus horikoshii [TaxId: 53953]} Back     information, alignment and structure
>d1p5fa_ c.23.16.2 (A:) DJ-1 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2fexa1 c.23.16.2 (A:1-188) Hypothetical protein Atu0886 {Agrobacterium tumefaciens [TaxId: 358]} Back     information, alignment and structure
>d1qvwa_ c.23.16.2 (A:) Hypothetical protein Ydr533Cp {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1a9xa4 c.30.1.1 (A:556-676) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2ab0a1 c.23.16.2 (A:2-196) Protein ThiJ (YajL) {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1n57a_ c.23.16.2 (A:) HSP31 (HchA; YedU) {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1fyea_ c.23.16.4 (A:) Aspartyl dipeptidase PepE {Salmonella typhimurium [TaxId: 90371]} Back     information, alignment and structure
>d1wu2a3 c.57.1.2 (A:181-324) MoeA, central domain {Pyrococcus horikoshii, PH1647 [TaxId: 53953]} Back     information, alignment and structure
>d1uz5a3 c.57.1.2 (A:181-328) MoeA, central domain {Archaeon Pyrococcus horikoshii, PH0582 [TaxId: 53953]} Back     information, alignment and structure
>d2ftsa3 c.57.1.2 (A:499-653) Gephyrin, domain 5 {Rat (Rattus norvegicus) [TaxId: 10116]} Back     information, alignment and structure
>d1u0ta_ e.52.1.1 (A:) Inorganic polyphosphate/ATP-NAD kinase PpnK {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure