Citrus Sinensis ID: 041802

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220---
Protein Sequence
MGKKMKLPFLSKNTHTLAKSSSSWPWPSCHQTRTLSFRNYNDNNSTNGAMFKTINLAYLDAETTESSLFTNTSSESATASFSTASEECSNGDPVETVIRGLRSERLFFEPGETSSILEEAKTSGFPYKESLVCSMESQDPYVDFKKSMVEMVEAHGLKDWEDLEELLCWYLRMNGKSNHGYIVGAFVDLLVALAFANSTSTSSDFITCSSSSLASRSCSPSSP
Secondary Structure (PSIPRED)
ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHcccccccccccccccccHHHHHHcccccccccEEEEEEcccHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cccccccHHHccccccccccccccccccccccccccccccccccccccccEccccccEccccccccccccccccccccccccccccccccccHHHHHHHccccccEEEcccccccHHHcccccccccccEEEEEEEccccHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccc
Coil and Loop (DISEMBL)
mgkkmklpflsknthtlaksssswpwpschqtrtlsfrnyndnnstngaMFKTINLAYLdaettesslftntssesatasfstaseecsngdpvETVIRGLrserlffepgetssILEEaktsgfpykeslvcsmesqdpyvdFKKSMVEMVEAHGLKDWEDLEELLCWYLRMNGKSNHGYIVGAFVDLLVALAFAnststssdfitcsssslasrscspssp
Flexible Loop (DISEMBL)
mgkkmklpflsKNTHtlaksssswpwpsCHQTRTLSFRNYNDNNSTNGAMFKTINLAYLDAETTESSLFTNTSSESATASfstaseecsngdpVETVIRGLRSERLFFEPGETSSILEEAKTSGFPYKESLVCSMESQDPYVDFKKSMVEMVEAHGLKDWEDLEELLCWYLRMNGKSNHGYIVGAFVDLLVALAFANSTSTSSDFitcsssslasrscspssp
Low Complexity Region (SEG)
MGKKMKLPFLSKNTHTLAKSSSSWPWPSCHQTRTLSFRNYNDNNSTNGAMFKTINLAYLDAETTESSLFTNtssesatasfstaseecsNGDPVETVIRGLRSERLFFEPGETSSILEEAKTSGFPYKESLVCSMESQDPYVDFKKSMVEMVEAHGLKDWEDLEELLCWYLRMNGKSNHGYIVGafvdllvalafaNststssdfitcsssslasrscspssP
Disordered region (IsUnstruct)
***********************WPWPSCHQTRTLSFRNYNDNNSTNGAMFKTINLAYLDA************************************IRGL***RLFF*****************PYKESLVCSMESQDPYVDFKKSMVEMVEAHGLKDWEDLEELLCWYLRMNGKSNHGYIVGAFVDLLVALAFANS*************************
Disordered Region (DISOPRED)
***K*KL*********************************************TINLAYLDA*********************************************************************LVCSMESQDPYVDFKKSMVEMVEAHGLKDWEDLEELLCWYLRMNGKSNHGYIVGAFVDLLVALA*****************************
Disordered Region (DISEMBL)
MGKKMKLPFLSKNT**************CHQTRTLSFRNYNDNNSTNGAMFKTINLAYLDAETTE**************************DPVETVIRGLRSERLFFEPGETSSILEEAKTSGFPYKESLVCSMESQDPYVDFKKSMVEMVEAHGLKDWEDLEELLCWYLRMNGKSNHGYIVGAFVDLLVALAFANS*************************
Disordered Region (DISPRO)
****************************CH*T*T*************GAMFKTI*LAYLD*********************************VETVIRGLRSERLFFEPGETSSILEEAKTSGFPYKESLVCSMESQDPYVDFKKSMVEMVEAHGLKDWEDLEELLCWYLRMNGKSNHGYIVGAFVDLLVALAFA***************************
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MGKKMKLPFLSKNTHTLAKSSSSWPWPSCHQTRTLSFRNYNDNNSTNGAMFKTINLAYLDAETTESSLFTNTSSESATASFSTASEECSNGDPVETVIRGLRSERLFFEPGETSSILEEAKTSGFPYKESLVCSMESQDPYVDFKKSMVEMVEAHGLKDWEDLEELLCWYLRMNGKSNHGYIVGAFVDLLVALAFANSTSTSSDFITCSSSSLASRSCSPSSP
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	223
224091913	278	predicted protein [Populus trichocarpa]	0.843	0.676	0.655	5e-62
224140047	195	predicted protein [Populus trichocarpa]	0.825	0.943	0.625	4e-58
225464408	226	PREDICTED: uncharacterized protein LOC10	0.802	0.792	0.606	2e-54
147783278	226	hypothetical protein VITISV_004927 [Viti	0.802	0.792	0.606	3e-54
351723889	239	uncharacterized protein LOC100527123 [Gl	0.883	0.824	0.559	5e-54
224097578	214	predicted protein [Populus trichocarpa]	0.789	0.822	0.583	2e-53
225440747	229	PREDICTED: uncharacterized protein LOC10	0.793	0.772	0.596	6e-53
147792347	231	hypothetical protein VITISV_021409 [Viti	0.793	0.766	0.596	6e-53
255578597	289	conserved hypothetical protein [Ricinus	0.838	0.647	0.579	9e-53
356503835	277	PREDICTED: uncharacterized protein LOC10	0.789	0.635	0.576	4e-51

>gi|224091913|ref|XP_002309397.1| predicted protein [Populus trichocarpa] gi|222855373|gb|EEE92920.1| predicted protein [Populus trichocarpa]

 Score =  243 bits (619), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 135/206 (65%), Positives = 155/206 (75%), Gaps = 18/206 (8%)

Query: 1   MGKKMKLPFLSK-NTHTLAKSSSSWPWPS-CHQTRTLSFRNYNDNNSTNGAMFKTINLAY 58
           MGKKMKLPFLSK NT+T       WPWP+ CHQ RTLSF     +  T+  MFKTIN A+
Sbjct: 1   MGKKMKLPFLSKINTNTDQSKRPLWPWPTYCHQPRTLSF-----SFRTSDGMFKTINSAF 55

Query: 59  LDA------ETTESSLFTNTSSESATASFSTASEECSNG-DPVETVIRGLRSERLFFEPG 111
           LDA      ++T  S FT +     +ASFSTAS++ S   DP+ETVIRGLRSERLFFEPG
Sbjct: 56  LDATNNDVVDSTPESWFTKSCE---SASFSTASDDQSGAIDPIETVIRGLRSERLFFEPG 112

Query: 112 ETSSILEEAKTSG-FPYKESLVCSMESQDPYVDFKKSMVEMVEAHGLKDWEDLEELLCWY 170
           ET+SILEEAK    FP+KE++V SMESQDPY+DFKKSM EMVEAHGL DWE LEELL  Y
Sbjct: 113 ETNSILEEAKAGDEFPFKETVVLSMESQDPYLDFKKSMEEMVEAHGLTDWEGLEELLSCY 172

Query: 171 LRMNGKSNHGYIVGAFVDLLVALAFA 196
           L++NG+SNHGYIV AFVDLLV LAFA
Sbjct: 173 LKVNGESNHGYIVSAFVDLLVGLAFA 198

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224140047|ref|XP_002323398.1| predicted protein [Populus trichocarpa] gi|222868028|gb|EEF05159.1| predicted protein [Populus trichocarpa]

 Score =  230 bits (586), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 127/203 (62%), Positives = 150/203 (73%), Gaps = 19/203 (9%)

Query: 5   MKLPFLSKNTHTLAKSSSS-WPWPS-CHQTRTLSFRNYNDNNSTNGAMFKTINLAYLDAE 62
           MKLPFLSKN      SS + WPWP+ C Q RTLSF     +  T+G M KTIN  +LDA 
Sbjct: 1   MKLPFLSKNNANTDHSSRALWPWPAYCQQPRTLSF-----SFRTSGGMLKTINPGFLDAT 55

Query: 63  TTE-------SSLFTNTSSESATASFSTASEECSN-GDPVETVIRGLRSERLFFEPGETS 114
            T+        S FTN+     +ASFSTAS++ S  G+ +ETVI+GLRSERLFF+PGET+
Sbjct: 56  NTDVVDSTSPESWFTNSCE---SASFSTASDDQSGAGESIETVIKGLRSERLFFKPGETN 112

Query: 115 SILEEAKTSG-FPYKESLVCSMESQDPYVDFKKSMVEMVEAHGLKDWEDLEELLCWYLRM 173
           SILEEAK  G FP+KES+V SM+S+DPY+DFKKSM EMVEAHGL DWE LEELL  YL++
Sbjct: 113 SILEEAKAGGEFPFKESVVLSMDSRDPYLDFKKSMEEMVEAHGLTDWEGLEELLSCYLKV 172

Query: 174 NGKSNHGYIVGAFVDLLVALAFA 196
           NGKSNHGYI+GAFVDLLV LA A
Sbjct: 173 NGKSNHGYIIGAFVDLLVGLAIA 195

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225464408|ref|XP_002269135.1| PREDICTED: uncharacterized protein LOC100244711 [Vitis vinifera] gi|296084462|emb|CBI25021.3| unnamed protein product [Vitis vinifera]

 Score =  218 bits (554), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 122/201 (60%), Positives = 138/201 (68%), Gaps = 22/201 (10%)

Query: 1   MGKKMKLPFLSKNTHTLAKSSSSWPWPSCHQTRTLSFRNYNDNNSTNGAMFKTINLAYLD 60
           MGKKMKLP L K   T       W WPSC   +TLSFR  +D       MFKT+N  + D
Sbjct: 1   MGKKMKLPSLFKAKET----KQPWQWPSCKHPKTLSFRAGDD-------MFKTVNSVFFD 49

Query: 61  ----AETTESSLFTNTSSESATASFSTASEECSNGDPVETVIRGLRSERLFFEPGETSSI 116
                ET ES  FTNTS    +ASFST SEE      VE VIRG++SERLFFEPG TSSI
Sbjct: 50  PTDGVETPES-WFTNTSE---SASFSTESEEEYGVKSVEVVIRGVQSERLFFEPGNTSSI 105

Query: 117 LEE---AKTSGFPYKESLVCSMESQDPYVDFKKSMVEMVEAHGLKDWEDLEELLCWYLRM 173
           LEE   A     P+KES+V +MES+DPYVDF+KSM EMVE+HGLKDW+ LEELL WYLR+
Sbjct: 106 LEEKAKAANEIHPFKESVVLAMESEDPYVDFRKSMEEMVESHGLKDWDCLEELLGWYLRV 165

Query: 174 NGKSNHGYIVGAFVDLLVALA 194
           NGK NHG+IVGAFVDLLV LA
Sbjct: 166 NGKKNHGFIVGAFVDLLVGLA 186

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147783278|emb|CAN62024.1| hypothetical protein VITISV_004927 [Vitis vinifera]

 Score =  217 bits (553), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 122/201 (60%), Positives = 138/201 (68%), Gaps = 22/201 (10%)

Query: 1   MGKKMKLPFLSKNTHTLAKSSSSWPWPSCHQTRTLSFRNYNDNNSTNGAMFKTINLAYLD 60
           MGKKMKLP L K   T       W WPSC   +TLSFR  +D       MFKT+N  + D
Sbjct: 1   MGKKMKLPSLFKAKET----KQPWQWPSCKXPKTLSFRAGDD-------MFKTVNSVFFD 49

Query: 61  ----AETTESSLFTNTSSESATASFSTASEECSNGDPVETVIRGLRSERLFFEPGETSSI 116
                ET ES  FTNTS    +ASFST SEE      VE VIRG++SERLFFEPG TSSI
Sbjct: 50  PTDGVETPES-WFTNTSE---SASFSTESEEEYGVKSVEVVIRGVQSERLFFEPGNTSSI 105

Query: 117 LEE---AKTSGFPYKESLVCSMESQDPYVDFKKSMVEMVEAHGLKDWEDLEELLCWYLRM 173
           LEE   A     P+KES+V +MES+DPYVDF+KSM EMVE+HGLKDW+ LEELL WYLR+
Sbjct: 106 LEEKAKAANEIHPFKESVVLAMESEDPYVDFRKSMEEMVESHGLKDWDCLEELLGWYLRV 165

Query: 174 NGKSNHGYIVGAFVDLLVALA 194
           NGK NHG+IVGAFVDLLV LA
Sbjct: 166 NGKKNHGFIVGAFVDLLVGLA 186

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|351723889|ref|NP_001235247.1| uncharacterized protein LOC100527123 [Glycine max] gi|255631606|gb|ACU16170.1| unknown [Glycine max]

 Score =  216 bits (550), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 118/211 (55%), Positives = 152/211 (72%), Gaps = 14/211 (6%)

Query: 1   MGKK-MKLPFLSKNTHTLAKSSSSWPW-PSCHQTRTLSFRNYNDNNSTNGAMFKTINLAY 58
           MGKK +KLP L K           W + PSC  ++TLSFR  +D+      MFKT+N  +
Sbjct: 1   MGKKSLKLPSLFKTKEAPRNHHHPWQFMPSCGHSKTLSFRGGDDD------MFKTVNSMF 54

Query: 59  LD--AETT---ESSLFTNTSSESATASFSTASEECSNGDPVETVIRGLRSERLFFEPGET 113
            D  AE+T     S FT TSSESA+ S  +      +G+ +E ++RG+RSERLFFEPG+T
Sbjct: 55  FDPSAESTIETPKSWFT-TSSESASISTESEDYYYCDGESLEMLVRGVRSERLFFEPGDT 113

Query: 114 SSILEEAKTSGFPYKESLVCSMESQDPYVDFKKSMVEMVEAHGLKDWEDLEELLCWYLRM 173
           SSILE+AK SGFP+KES+V +MES+DPY DFK+SM EMVE+HG++DWE LEELL WYLR+
Sbjct: 114 SSILEKAKASGFPFKESVVLAMESEDPYEDFKRSMEEMVESHGVRDWEGLEELLTWYLRV 173

Query: 174 NGKSNHGYIVGAFVDLLVALAFANSTSTSSD 204
           NGK+NHG+IVGAFVDLL +LA +N ++T SD
Sbjct: 174 NGKNNHGFIVGAFVDLLFSLAASNGSNTCSD 204

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224097578|ref|XP_002310994.1| predicted protein [Populus trichocarpa] gi|222850814|gb|EEE88361.1| predicted protein [Populus trichocarpa]

 Score =  214 bits (546), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 115/197 (58%), Positives = 143/197 (72%), Gaps = 21/197 (10%)

Query: 5   MKLPFLSKNTHTLAKSSSSW-PWPSCHQTRTLSFRNYNDNNSTNGAMFKTINLAYLD--- 60
           MK+P L K    + ++  SW  WPSC   +TLSFR  +D       + KT+N  + D   
Sbjct: 1   MKIPALFK----IKETKQSWQKWPSCKHPKTLSFRGGDD-------VIKTVNSVFFDPSE 49

Query: 61  -AETTESSLFTNTSSESATASFSTASEECSNGDPVETVIRGLRSERLFFEPGETSSILEE 119
             ET ES  FTN+S    T SFST SE   +G+ +E V+RG+RSERLFFEPG+T+SILEE
Sbjct: 50  RVETPES-WFTNSSE---TTSFSTESE-GFDGESLEVVVRGVRSERLFFEPGDTNSILEE 104

Query: 120 AKTSGFPYKESLVCSMESQDPYVDFKKSMVEMVEAHGLKDWEDLEELLCWYLRMNGKSNH 179
           AKT GFP+KES+V +MES+DPYVDF++SM EMVE+HGLKDW+ LEELL WYL++NGK NH
Sbjct: 105 AKTGGFPFKESVVLAMESEDPYVDFRRSMEEMVESHGLKDWDCLEELLGWYLKVNGKKNH 164

Query: 180 GYIVGAFVDLLVALAFA 196
           GYIVGAFVDLLV +A A
Sbjct: 165 GYIVGAFVDLLVGIAAA 181

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225440747|ref|XP_002275570.1| PREDICTED: uncharacterized protein LOC100251218 [Vitis vinifera]

 Score =  213 bits (541), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 114/191 (59%), Positives = 132/191 (69%), Gaps = 14/191 (7%)

Query: 1   MGKKMKLPFLSKNTHTLAKSSSSWPWPSCHQTRTLSFRNYNDNNSTNGAMFKTINLAYLD 60
           MGK+ K PFL KN      +   W WP C Q +TLSFR  + +      MFKT+N AY D
Sbjct: 1   MGKRTKFPFLLKN----VDARFPWQWPYCTQPKTLSFRVGSSD------MFKTLNSAYSD 50

Query: 61  AETTESSLFTNTSSESATASFSTASEECSNGDPVETVIRGLRSERLFFEPGETSSILEEA 120
              T+    TN+S   + +  S  S        +ETVIRGLRSERLFFEPGETSSILEEA
Sbjct: 51  VVDTQELWSTNSSESESFSGSSEESGGEC----IETVIRGLRSERLFFEPGETSSILEEA 106

Query: 121 KTSGFPYKESLVCSMESQDPYVDFKKSMVEMVEAHGLKDWEDLEELLCWYLRMNGKSNHG 180
           K  GFP+KES+V SMES+DPYVDF++SM EM EAHGLKDWE LEELL WYLR+N K NHG
Sbjct: 107 KGGGFPFKESVVLSMESEDPYVDFRRSMEEMAEAHGLKDWESLEELLSWYLRVNEKQNHG 166

Query: 181 YIVGAFVDLLV 191
           YI+GAFVDLLV
Sbjct: 167 YIIGAFVDLLV 177

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147792347|emb|CAN61477.1| hypothetical protein VITISV_021409 [Vitis vinifera]

 Score =  213 bits (541), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 114/191 (59%), Positives = 132/191 (69%), Gaps = 14/191 (7%)

Query: 1   MGKKMKLPFLSKNTHTLAKSSSSWPWPSCHQTRTLSFRNYNDNNSTNGAMFKTINLAYLD 60
           MGK+ K PFL KN      +   W WP C Q +TLSFR  + +      MFKT+N AY D
Sbjct: 1   MGKRTKFPFLLKN----VDARFPWQWPYCTQPKTLSFRVGSSD------MFKTLNSAYSD 50

Query: 61  AETTESSLFTNTSSESATASFSTASEECSNGDPVETVIRGLRSERLFFEPGETSSILEEA 120
              T+    TN+S   + +  S  S        +ETVIRGLRSERLFFEPGETSSILEEA
Sbjct: 51  VVDTQELWSTNSSESESFSGSSEESGGEC----IETVIRGLRSERLFFEPGETSSILEEA 106

Query: 121 KTSGFPYKESLVCSMESQDPYVDFKKSMVEMVEAHGLKDWEDLEELLCWYLRMNGKSNHG 180
           K  GFP+KES+V SMES+DPYVDF++SM EM EAHGLKDWE LEELL WYLR+N K NHG
Sbjct: 107 KGGGFPFKESVVLSMESEDPYVDFRRSMEEMAEAHGLKDWESLEELLSWYLRVNEKQNHG 166

Query: 181 YIVGAFVDLLV 191
           YI+GAFVDLLV
Sbjct: 167 YIIGAFVDLLV 177

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255578597|ref|XP_002530160.1| conserved hypothetical protein [Ricinus communis] gi|223530321|gb|EEF32215.1| conserved hypothetical protein [Ricinus communis]

 Score =  212 bits (540), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 127/219 (57%), Positives = 148/219 (67%), Gaps = 32/219 (14%)

Query: 1   MGKKMKLPFLSK-NTHTLAKSS--SSWPWPS-CHQTRTLSFRNYNDNNSTNGAMFKTINL 56
           MGKKMKLPFLSK NT +   SS  SSWPWP+ C Q +TLSFR  N        MFKT+N 
Sbjct: 1   MGKKMKLPFLSKINTTSTDYSSLNSSWPWPAYCQQPKTLSFRAEN--------MFKTLNS 52

Query: 57  AYLDAE--------TTESSLFTNTSSESATASFSTASEECSNGDPVETVIRGLRSERLFF 108
           AYL+            ESS FTN+S+  + +  S + E   +G+ +ETVI+GLRSERLFF
Sbjct: 53  AYLEGALDVVDNIPANESSYFTNSSTSESVSLSSASDESGISGECIETVIKGLRSERLFF 112

Query: 109 EPGETSSILEEAKTSG------------FPYKESLVCSMESQDPYVDFKKSMVEMVEAHG 156
           +PGETSSILEEA                  +KES+  SM+SQDPYVDFKKSM EMVEAHG
Sbjct: 113 KPGETSSILEEANKKAAKEAAEGGGDELLAFKESIALSMDSQDPYVDFKKSMEEMVEAHG 172

Query: 157 LKDWEDLEELLCWYLRMNGKSNHGYIVGAFVDLLVALAF 195
           LKDWE LEELL  YL++NGKSNHGYI+GAFVDLLV LA 
Sbjct: 173 LKDWESLEELLSCYLKVNGKSNHGYIIGAFVDLLVGLAL 211

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356503835|ref|XP_003520708.1| PREDICTED: uncharacterized protein LOC100803791 [Glycine max]

 Score =  206 bits (525), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 121/210 (57%), Positives = 144/210 (68%), Gaps = 34/210 (16%)

Query: 1   MGKKMKLPFLSKNTHTLAKSSSSWPWPSCHQTRTLSFRNYNDNNSTNGAMFKTINLAYLD 60
           MGKKMKLP L  N      SSSSWP   CHQ RTLSFR  ND      A FKTIN AYLD
Sbjct: 1   MGKKMKLPSLLHNK----PSSSSWP---CHQPRTLSFRTQND------AAFKTINAAYLD 47

Query: 61  A-ETTESSLFTNTSSESATASFSTASEECSNG-DPVETVIRGLRSERLFFEPGETSSILE 118
             E++E+S FT +     + SFSTASE+ S     +++VIRGLRS+RLFFEP ETSSILE
Sbjct: 48  TLESSETSFFTVSPD---SGSFSTASEQDSRRPHSLDSVIRGLRSDRLFFEPDETSSILE 104

Query: 119 ----------------EAKTSGFPYKESLVCSMESQDPYVDFKKSMVEMVEAHGLKDWED 162
                              T+  P+K+S+V S++SQDPYVDF++SM EMVEA  +KDWE 
Sbjct: 105 AKPPPPPPPPPSPPPPPTTTTTLPFKDSVVMSVDSQDPYVDFRRSMEEMVEAQCVKDWEG 164

Query: 163 LEELLCWYLRMNGKSNHGYIVGAFVDLLVA 192
           L+ELLCWYL++NGK+NHGYIVGAFVDLLVA
Sbjct: 165 LQELLCWYLKVNGKTNHGYIVGAFVDLLVA 194

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	223
TAIR|locus:2039290	261	OFP15 "ovate family protein 15	0.408	0.348	0.556	2.6e-30
TAIR|locus:2079969	282	OFP18 "ovate family protein 18	0.780	0.617	0.390	6.8e-24
TAIR|locus:2175453	260	OFP13 "ovate family protein 13	0.309	0.265	0.533	1.3e-15
TAIR|locus:2079979	178	AT3G52550 "AT3G52550" [Arabido	0.152	0.191	0.578	5.4e-09
TAIR|locus:2016344	294	OFP14 "ovate family protein 14	0.372	0.282	0.367	1.1e-05
TAIR|locus:2064382	320	OFP2 "ovate family protein 2"	0.246	0.171	0.418	1.3e-05
TAIR|locus:504955854	159	OFP6 "ovate family protein 6"	0.309	0.433	0.342	1.4e-05
TAIR|locus:4515102951	183	AT2G36026 "AT2G36026" [Arabido	0.331	0.404	0.297	2.1e-05
TAIR|locus:2180977	270	OFP1 "ovate family protein 1"	0.309	0.255	0.376	3.8e-05
TAIR|locus:2130399	182	OFP11 "AT4G14860" [Arabidopsis	0.318	0.390	0.4	4.2e-05

TAIR|locus:2039290 OFP15 "ovate family protein 15" [Arabidopsis thaliana (taxid:3702)]

 Score = 233 (87.1 bits), Expect = 2.6e-30, Sum P(2) = 2.6e-30
 Identities = 54/97 (55%), Positives = 68/97 (70%)

Query:    92 DPVETVIRGLRS-ERLFFEP-GETSSILEEAKTSGFPYKES---LVCSMESQDPYVDFKK 146
             D VE VI+GLRS ERL FE  GET+SILEEA +      E    ++ S+ES DPY DFK+
Sbjct:    66 DSVENVIKGLRSSERLIFESKGETNSILEEATSKREEEDEEEGFMLFSLESDDPYSDFKR 125

Query:   147 SMVEMVEAHGLK-DWEDLEELLCWYLRMNGKSNHGYI 182
             SM EMVEAH L  DW+ LE+LL  +L++N K++H YI
Sbjct:   126 SMEEMVEAHALHHDWKSLEKLLLQFLKVNAKTSHRYI 162

GO:0009507 "chloroplast" evidence=ISM

GO:0045892 "negative regulation of transcription, DNA-dependent" evidence=IDA

GO:0009741 "response to brassinosteroid stimulus" evidence=RCA

TAIR|locus:2079969 OFP18 "ovate family protein 18" [Arabidopsis thaliana (taxid:3702)]

 Score = 274 (101.5 bits), Expect = 6.8e-24, P = 6.8e-24
 Identities = 77/197 (39%), Positives = 105/197 (53%)

Query:     1 MGKKMKLPFLSKNTHTLA------KSSSSWPWPSCHQTRTLSFRNYNDNNSTNGAMFKTI 54
             M +KMKLPFL+KNT + +       SSSSWPWPS HQ      +N    +S    +    
Sbjct:     1 MVRKMKLPFLNKNTSSSSFSSNSSSSSSSWPWPSSHQ------QNLKTISSKASFIVNKP 54

Query:    55 NLAYLDAETTESSLFTNXXXXXXXXXXXXXXXXXXNG---DPVETVIRGLRS-ERLFFEP 110
                Y + E    S F++                  N    + +E VI+GL+S +RL FE 
Sbjct:    55 KDVY-EPEPPPRS-FSSSPSSSSYSSFSSTSHAIENPPEIESIENVIKGLKSSKRLIFER 112

Query:   111 -GETSSILEEA-KTSGFPYKES--LVCSMESQDPYVDFKKSMVEMVEAHGLK-DWEDLEE 165
              G ++SILEEA K      +E   ++ S+ES DPY DFK SM +MVE H L  DW  LE+
Sbjct:   113 RGTSNSILEEATKRDDHEEEEDGLMLLSLESNDPYTDFKNSMEKMVEVHVLHHDWISLEK 172

Query:   166 LLCWYLRMNGKSNHGYI 182
             LL W+L++N K++H YI
Sbjct:   173 LLFWFLKVNVKASHRYI 189

GO:0005634 "nucleus" evidence=ISM

GO:0045892 "negative regulation of transcription, DNA-dependent" evidence=IDA

TAIR|locus:2175453 OFP13 "ovate family protein 13" [Arabidopsis thaliana (taxid:3702)]

 Score = 196 (74.1 bits), Expect = 1.3e-15, P = 1.3e-15
 Identities = 40/75 (53%), Positives = 53/75 (70%)

Query:   112 ETSSILEEAKTSGFPYKE-SLVCSMESQDPYVDFKKSMVEMVEAHG--LKDWEDLEELLC 168
             ET ++ E+  T   P +E S+  +MES+DPY DF++SM EMV +HG   KDWE LE +L 
Sbjct:   131 ETVAVGEDRST---PIEEISVAVAMESEDPYGDFRRSMEEMVTSHGELAKDWESLESMLA 187

Query:   169 WYLRMNGKSNHGYIV 183
             WYLRMNG+ +HG IV
Sbjct:   188 WYLRMNGRKSHGVIV 202

GO:0005634 "nucleus" evidence=ISM

GO:0045892 "negative regulation of transcription, DNA-dependent" evidence=IDA

TAIR|locus:2079979 AT3G52550 "AT3G52550" [Arabidopsis thaliana (taxid:3702)]

 Score = 99 (39.9 bits), Expect = 5.4e-09, Sum P(2) = 5.4e-09
 Identities = 22/38 (57%), Positives = 26/38 (68%)

Query:     5 MKLPFLSKNTHTLAKS---SSSWPWPSCHQT-RTLSFR 38
             MK+PFL+K+  +   S   SSSW WPSCHQ  RT SFR
Sbjct:     1 MKVPFLNKSFSSSCYSNSNSSSWGWPSCHQNPRTQSFR 38

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2016344 OFP14 "ovate family protein 14" [Arabidopsis thaliana (taxid:3702)]

 Score = 117 (46.2 bits), Expect = 1.1e-05, P = 1.1e-05
 Identities = 36/98 (36%), Positives = 55/98 (56%)

Query:   101 LRSERLFFEPG--------ETSSILEEAKT-SGFPYKESLVCSMESQD-PYVDFKKSMVE 150
             LR+ERL   PG        ET+S   E ++ S     E+ +  +   D P  DF++SMVE
Sbjct:   153 LRTERLSPPPGSSEGRPSMETTSTSSERQSRSTLVLPENCIAVLRYTDEPQEDFRQSMVE 212

Query:   151 MVEAH-GLK----DWEDLEELLCWYLRMNGKSNHGYIV 183
             M+E+  G++    DW+ +EELL  YL +N K +H +I+
Sbjct:   213 MMESKLGMRESEVDWDLMEELLFCYLDLNDKKSHKFIL 250

GO:0005634 "nucleus" evidence=ISM

GO:0045892 "negative regulation of transcription, DNA-dependent" evidence=IDA

TAIR|locus:2064382 OFP2 "ovate family protein 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 117 (46.2 bits), Expect = 1.3e-05, P = 1.3e-05
 Identities = 23/55 (41%), Positives = 34/55 (61%)

Query:   129 ESLVCSMESQDPYVDFKKSMVEMVEAHGLKDWEDLEELLCWYLRMNGKSNHGYIV 183
             ES      S DP  DF++SM+EM+E + ++  +DLE+LL  YL +N K  H  I+
Sbjct:   252 ESFAVMKRSVDPKKDFRESMIEMIEENNIRASKDLEDLLACYLTLNPKEYHDLII 306

GO:0005634 "nucleus" evidence=ISM

GO:0045892 "negative regulation of transcription, DNA-dependent" evidence=IDA

GO:0009407 "toxin catabolic process" evidence=RCA

GO:0010583 "response to cyclopentenone" evidence=RCA

GO:0048513 "organ development" evidence=RCA

TAIR|locus:504955854 OFP6 "ovate family protein 6" [Arabidopsis thaliana (taxid:3702)]

 Score = 109 (43.4 bits), Expect = 1.4e-05, P = 1.4e-05
 Identities = 24/70 (34%), Positives = 40/70 (57%)

Query:   115 SILEEAKTSGFPYKE-SLVCSMESQDPYVDFKKSMVEMVEAHGLKDWEDLEELLCWYLRM 173
             S +  A  S  P    S+    +S DPY+DF++SM++M+  + +   ++L ELL  +L +
Sbjct:    51 SSISSATPSSTPLATASVAVEKDSDDPYLDFRQSMLQMILENQIYSKDELRELLQCFLSL 110

Query:   174 NGKSNHGYIV 183
             N   +HG IV
Sbjct:   111 NSHYHHGIIV 120

GO:0005634 "nucleus" evidence=ISM

GO:0045892 "negative regulation of transcription, DNA-dependent" evidence=IDA

TAIR|locus:4515102951 AT2G36026 "AT2G36026" [Arabidopsis thaliana (taxid:3702)]

 Score = 111 (44.1 bits), Expect = 2.1e-05, P = 2.1e-05
 Identities = 22/74 (29%), Positives = 41/74 (55%)

Query:   110 PGETSSILEEAKTSGFPYKESLVCSMESQDPYVDFKKSMVEMVEAHGLKDWEDLEELLCW 169
             P  +    + + +S  P   ++    +S DPY+DF++SM++M+  + +    DL ELL  
Sbjct:    67 PSTSHWFSDTSSSSATPSAAAVAVEKDSDDPYLDFRQSMLQMILENEIYSKNDLRELLHC 126

Query:   170 YLRMNGKSNHGYIV 183
             +L +N   +HG I+
Sbjct:   127 FLSLNEPYHHGIII 140

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2180977 OFP1 "ovate family protein 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 113 (44.8 bits), Expect = 3.8e-05, P = 3.8e-05
 Identities = 26/69 (37%), Positives = 37/69 (53%)

Query:   115 SILEEAKTSGFPYKESLVCSMESQDPYVDFKKSMVEMVEAHGLKDWEDLEELLCWYLRMN 174
             S+   A+ SG   + S      S DP  DFK+SM EM+  + ++  +DLEELL  YL +N
Sbjct:   184 SVSSSARRSGSSARRSRAVVKASVDPKRDFKESMEEMIAENKIRATKDLEELLACYLCLN 243

Query:   175 GKSNHGYIV 183
                 H  I+
Sbjct:   244 SDEYHAIII 252

GO:0005634 "nucleus" evidence=ISM

GO:0005515 "protein binding" evidence=IPI

GO:0005730 "nucleolus" evidence=IDA

GO:0005856 "cytoskeleton" evidence=IDA

GO:0045892 "negative regulation of transcription, DNA-dependent" evidence=IDA

GO:0051510 "regulation of unidimensional cell growth" evidence=IMP

GO:0048513 "organ development" evidence=RCA

TAIR|locus:2130399 OFP11 "AT4G14860" [Arabidopsis thaliana (taxid:3702)]

 Score = 109 (43.4 bits), Expect = 4.2e-05, P = 4.2e-05
 Identities = 32/80 (40%), Positives = 44/80 (55%)

Query:   109 EPGETSSILEEAKTSGFPYKESLVCSMESQDPYVDFKKSMVEMVEAHGLK-----DWEDL 163
             E  ET++ + +  + G     +++  +ES DPY DF +SM EMVEA  L      D E L
Sbjct:    85 EEDETTTSVSKLLSGG----TAIMKHIESPDPYRDFGRSMREMVEARDLTRDVVADREYL 140

Query:   164 EELLCWYLRMNGKSNHGYIV 183
              ELL  YL +N K  H +IV
Sbjct:   141 HELLFCYLYLNPKHTHRFIV 160

GO:0045892 "negative regulation of transcription, DNA-dependent" evidence=IDA

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Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: grail3.0013000901 hypothetical protein (278 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	223
pfam04844	60	pfam04844, Ovate, Transcriptional repressor, ovate	1e-29
TIGR01568	66	TIGR01568, A_thal_3678, uncharacterized plant-spec	2e-25

>gnl|CDD|191110 pfam04844, Ovate, Transcriptional repressor, ovate

 Score =  104 bits (262), Expect = 1e-29
 Identities = 33/60 (55%), Positives = 43/60 (71%)

Query: 137 SQDPYVDFKKSMVEMVEAHGLKDWEDLEELLCWYLRMNGKSNHGYIVGAFVDLLVALAFA 196
           S DPY DF++SMVEM+  +G++DW+DLEELL  YL +N K +H  IV AF D+ VAL   
Sbjct: 1   SSDPYEDFRRSMVEMIVENGIRDWDDLEELLACYLSLNAKEHHRAIVAAFADVWVALFAP 60

This is a family of transcriptional repressors. In plants, these proteins are important regulators of growth and development. Length = 60

>gnl|CDD|130631 TIGR01568, A_thal_3678, uncharacterized plant-specific domain TIGR01568

 Score = 93.6 bits (233), Expect = 2e-25
 Identities = 34/62 (54%), Positives = 44/62 (70%), Gaps = 1/62 (1%)

Query: 134 SMESQDPYVDFKKSMVEMVEAHGL-KDWEDLEELLCWYLRMNGKSNHGYIVGAFVDLLVA 192
           + ES DPY DF++SM EM+E   L  DW++LEELL  YL +N K +H +IV AFVD+L A
Sbjct: 4   AKESDDPYEDFRRSMEEMIEERELEADWKELEELLACYLDLNPKKSHRFIVRAFVDILSA 63

Query: 193 LA 194
           L 
Sbjct: 64  LL 65

This model describes an uncharacterized domain of about 70 residues found exclusively in plants, generally toward the C-terminus of proteins of 200 to 350 amino acids in length. At least 14 such proteins are found in Arabidopsis thaliana. Other regions of these proteins tend to consist largely of low-complexity sequence. Length = 66

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	223
TIGR01568	66	A_thal_3678 uncharacterized plant-specific domain	100.0
PF04844	59	Ovate: Transcriptional repressor, ovate; InterPro:	99.97

>TIGR01568 A_thal_3678 uncharacterized plant-specific domain TIGR01568

Probab=100.00  E-value=1.1e-34  Score=213.40  Aligned_cols=65  Identities=52%  Similarity=0.874  Sum_probs=62.9

Q ss_pred             eEEEeeccChhHHHHHHHHHHHHHcCC-CChhhHHHHHHHHHHccCCCChhhHHHHHHHHHHHhhc
Q 041802          131 LVCSMESQDPYVDFKKSMVEMVEAHGL-KDWEDLEELLCWYLRMNGKSNHGYIVGAFVDLLVALAF  195 (223)
Q Consensus       131 vAV~~~S~DPy~DFR~SM~EMI~e~gi-~d~~dLeELL~cYL~LN~~~~H~~Iv~AF~dl~~~L~s  195 (223)
                      |||+|+|.|||.|||+||+|||+++|| .+|++|||||+|||+||+++||++|++||+|||++|++
T Consensus         1 vAv~k~S~DPy~DFr~SM~EMI~~~~i~~~w~~LeeLL~cYL~LN~~~~H~~Iv~AF~dl~~~L~~   66 (66)
T TIGR01568         1 VAVAKESDDPYEDFRRSMEEMIEERELEADWKELEELLACYLDLNPKKSHRFIVRAFVDILSALLS   66 (66)
T ss_pred             CeeeeCCCChHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHhCCchhhhHHHHHHHHHHHHHhC
Confidence            799999999999999999999999999 58999999999999999999999999999999999974

This model describes an uncharacterized domain of about 70 residues found exclusively in plants, generally toward the C-terminus of proteins of 200 to 350 amino acids in length. At least 14 such proteins are found in Arabidopsis thaliana. Other regions of these proteins tend to consist largely of low-complexity sequence.

>PF04844 Ovate: Transcriptional repressor, ovate; InterPro: IPR006458 This group of sequences contain an uncharacterised domain of about 70 residues found exclusively in plants, generally toward the C terminus of proteins of 200 to 350 amino acids in length

Probab=99.97  E-value=1.3e-32  Score=198.50  Aligned_cols=59  Identities=56%  Similarity=0.993  Sum_probs=57.7

Q ss_pred             ccChhHHHHHHHHHHHHHcCCCChhhHHHHHHHHHHccCCCChhhHHHHHHHHHHHhhc
Q 041802          137 SQDPYVDFKKSMVEMVEAHGLKDWEDLEELLCWYLRMNGKSNHGYIVGAFVDLLVALAF  195 (223)
Q Consensus       137 S~DPy~DFR~SM~EMI~e~gi~d~~dLeELL~cYL~LN~~~~H~~Iv~AF~dl~~~L~s  195 (223)
                      |.|||+|||+||+|||+++||++|++|||||+|||+||+++||++|++||+|||.+|++
T Consensus         1 S~DP~~DFr~SM~EMI~~~~i~~~~~LeeLL~cYL~LN~~~~H~~Iv~aF~dv~~~l~s   59 (59)
T PF04844_consen    1 SSDPYEDFRESMVEMIEENGIRDWDDLEELLACYLSLNSPEHHKFIVEAFVDVWVELFS   59 (59)
T ss_pred             CCCHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhCChhhhhHHHHHHHHHHHHHhC
Confidence            78999999999999999999999999999999999999999999999999999999974

At least 14 such proteins are found in Arabidopsis thaliana (Mouse-ear cress). Other regions of these proteins tend to consist largely of low-complexity sequence. Function is not known.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	223
2nsz_A	129	Programmed cell death protein 4; PDCD4, tumor supp	80.85
2ion_A	152	PDCD4, programmed cell death 4, PDCD4; alpha-helic	80.39

>2nsz_A Programmed cell death protein 4; PDCD4, tumor suppressor, translation, antitumor protein; 1.15A {Mus musculus} SCOP: a.118.1.14 PDB: 2kzt_B 2hm8_A 2ggf_A

Probab=80.85  E-value=2.3  Score=32.97  Aligned_cols=47  Identities=13%  Similarity=-0.005  Sum_probs=36.4

Q ss_pred             hhHHHHHHHHHHHHHcCCCChhhHHHHHHHHHHccCCCChhhHHHHHHH
Q 041802          140 PYVDFKKSMVEMVEAHGLKDWEDLEELLCWYLRMNGKSNHGYIVGAFVD  188 (223)
Q Consensus       140 Py~DFR~SM~EMI~e~gi~d~~dLeELL~cYL~LN~~~~H~~Iv~AF~d  188 (223)
                      |-++|++.|..+|.|-=  .-.|++|-..|.-.||.+.+|..+|+-.+.
T Consensus         2 p~eel~kki~~ll~EY~--~~~D~~Ea~~cl~eL~~p~f~~e~V~~~i~   48 (129)
T 2nsz_A            2 PVNHLVKEIDMLLKEYL--LSGDISEAEHCLKELEVPHFHHELVYEAIV   48 (129)
T ss_dssp             CCCHHHHHHHHHHHHHH--HHCCHHHHHHHHHHHTCGGGHHHHHHHHHH
T ss_pred             cHHHHHHHHHHHHHHHH--cCCCHHHHHHHHHHhCCCccHHHHHHHHHH
Confidence            67889999999998832  124889999999999999888866654433

>2ion_A PDCD4, programmed cell death 4, PDCD4; alpha-helical, antitumor protein; 1.57A {Mus musculus} SCOP: a.118.1.14 PDB: 2ios_A 2iol_A

Probab=80.39  E-value=2.5  Score=33.96  Aligned_cols=49  Identities=12%  Similarity=0.020  Sum_probs=38.2

Q ss_pred             ChhHHHHHHHHHHHHHcCCCChhhHHHHHHHHHHccCCCChhhHHHHHHHH
Q 041802          139 DPYVDFKKSMVEMVEAHGLKDWEDLEELLCWYLRMNGKSNHGYIVGAFVDL  189 (223)
Q Consensus       139 DPy~DFR~SM~EMI~e~gi~d~~dLeELL~cYL~LN~~~~H~~Iv~AF~dl  189 (223)
                      .|-.+|++.|..+|.|-=  .-.|++|-..|.-.||.+.+|..+|.-.+.+
T Consensus         3 ~~~eel~kki~~lL~EY~--~~~D~~EA~~cl~EL~~p~f~~e~V~~~i~~   51 (152)
T 2ion_A            3 QPVNHLVKEIDMLLKEYL--LSGDISEAEHCLKELEVPHFHHELVYEAIVM   51 (152)
T ss_dssp             CCCCHHHHHHHHHHHHHH--HHCCHHHHHHHHHHHTCGGGHHHHHHHHHHH
T ss_pred             ChHHHHHHHHHHHHHHHH--hCCCHHHHHHHHHHhCCCcchHHHHHHHHHH
Confidence            577899999999998831  1248899999999999998887776654433

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00