Citrus Sinensis ID: 041888

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320------
Protein Sequence
MENRLKLRISRLFRSSFGSCRSRNISESDVVVKLTHKNSNSHMKMMMMTEPLLSPKPRPFPSICRPKCPEITTTHPQMMIFNNTCCIDTAPRSKVSEQYSPFALTTTTSNSSDNHNGHVMCPPASPTSPFNDNTLFYYGCNKEKKKHHSHSEKNRKKKRTHSRKTNRRSDSACIFSSSSQESFRGWSWFSSDEDDNEKEDETETLFSSKTLSSDSSGSSLHRRHRSLRKKDGTRRRRAAARKLGPDVLPLPGGKVKDSFAVVKSSSDPYNDFRTSMVEMIVEKQIFAAKDLEQLLQCFLSLNSHHHHRIILEVFTEIWEALFSDWS
Secondary Structure (PSIPRED)
ccccccEEEEHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHcccccccccccccccccEEEEEEEcccHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHcccc
Secondary Structure Prediction (SSPRO)
ccccEEEEEEHEEcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEcccccccccHHHccccccccEEEEcccccccccccccccccccccccccccccEEEEEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHccccccccccccccccEEEEEEEEccccHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHcccc
Coil and Loop (DISEMBL)
MENRLKLRISRLFRssfgscrsrniseSDVVVKLTHKNSNSHMKMMmmtepllspkprpfpsicrpkcpeittthpqmmifnntccidtaprskvseqyspfalttttsnssdnhnghvmcppasptspfndntlfyygcnkekkkhhshseknrkkkrthsrktnrrsdsacifssssqesfrgwswfssdeddnekedetetlfssktlssdssgsslhrrhrslrkkdGTRRRRAAARklgpdvlplpggkvkdsfavvksssdpyndfRTSMVEMIVEKQIFAAKDLEQLLQCFLSLNSHHHHRIILEVFTEIWEALFSDWS
Flexible Loop (DISEMBL)
MENRLKLRISRLfrssfgscrsrnisesdvvvKLTHKNSNSHMKMMMMTEPLLSPKPRPFPSICRPKCPEITTTHPQMMIFNNTCCIDTAPRSKVSEQYSPFALTTttsnssdnhNGHVMCPPASPTSPFNDNTLFYYGCNKEkkkhhshseknrkkkrthsrktnrrsdsacifssssqesfrgwsWFSSDEDDNEKEDETetlfssktlssdssgsslhrrhrslrkkdgtrrrraaarklgpdvlplpggkvkdsfavvksssdpyndFRTSMVEMIVEKQIFAAKDLEQLLQCFLSLNSHHHHRIILEVFTEIWEALFSDWS
Low Complexity Region (SEG)
MENRLKLRISRLFRSSFGSCRSRNISESDVVVKLThknsnshmkmmmmTEPLLSPKPRPFPSICRPKCPEITTTHPQMMIFNNTCCIDTAPRSKVSEQYSPFALttttsnssdnhnGHVMCPPASPTSPFNDNTLFYYGCnkekkkhhshseknrkkkrTHSRKTNRRSDSACIFSSSSQESFRGWSWFSSdeddnekedetetlfssktlssdssgsslhrrhrslrKKDGTRRRRAAARKLGPDVLPLPGGKVKDSFAVVKSSSDPYNDFRTSMVEMIVEKQIFAAKDLEQLLQCFLSLNSHHHHRIILEVFTEIWEALFSDWS
Disordered region (IsUnstruct)
**************************************************************ICRPKCPEITTTHPQMMIFNNTCCIDTA******************************************NTLFYYGC********************************************************************************************************************************YNDFRTSMVEMIVEKQIFAAKDLEQLLQCFLS**************************
Disordered Region (DISOPRED)
****LKL*ISRLFRSSF************************************************************************************************************************************************************************************************************************************************SFAVVKSSSDPYNDFRTSMVEMIVEKQIFAAKDLEQLLQCFLSLNSHHHHRIILEVFTEIWEALFSDW*
Disordered Region (DISEMBL)
MENRLKLRISRLFRSSFGSCRSRNISESDVVVKLTHKNSNSHMKMMMMTEPLLSPKPRPFPSICRPKCPEITTTHPQMMIFNNTCCIDTAPRSKVSEQYSPFALTTTTSNSSDNHNGHVMCPPASPTSPFNDNTLFYYGCNK*****************************************RGWSWF**************************************************ARKLGPDVLPLPGGKVKDSFAVVKSSSDPYNDFRTSMVEMIVEKQIFAAKDLEQLLQCFLSLNSHHHHRIILEVFTEIWEALFSDWS
Disordered Region (DISPRO)
***RLKLRISRLFRSSF*SC***********VKLTHK*****MKMMMMTEPLLSPKPRPFPSICRPKCPEITTTHPQMMIFNNTCCIDTAPRSKVSEQYSPFALTTTTS*********VMCPPASPTSPFNDNTLFYYGCNKEK*************************************************************************************************************KVKDSFAVVKSSSDPYNDFRTSMVEMIVEKQIFAAKDLEQLLQCFLSLNSHHHHRIILEVFTEIWEALFSD**
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MENRLKLRISRLFRSSFGSCRSRNISESDVVVKLTHKNSNSHMKMMMMTEPLLSPKPRPFPSICRPKCPEITTTHPQMMIFNNTCCIDTAPRSKVSEQYSPFALTTTTSNSSDNHNGHVMCPPASPTSPFNDNTLFYYGCNKEKKKHHSHSEKNRKKKRTHSRKTNRRSDSACIFSSSSQESFRGWSWFSSDEDDNEKEDETETLFSSKTLSSDSSGSSLHRRHRSLRKKDGTRRRRAAARKLGPDVLPLPGGKVKDSFAVVKSSSDPYNDFRTSMVEMIVEKQIFAAKDLEQLLQCFLSLNSHHHHRIILEVFTEIWEALFSDWS
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	326
224143539	292	predicted protein [Populus trichocarpa]	0.877	0.979	0.554	1e-65
255546489	301	conserved hypothetical protein [Ricinus	0.889	0.963	0.531	3e-59
297738827	807	unnamed protein product [Vitis vinifera]	0.914	0.369	0.486	4e-58
225445242	271	PREDICTED: uncharacterized protein LOC10	0.806	0.970	0.482	1e-50
388503310	290	unknown [Lotus japonicus]	0.877	0.986	0.427	1e-43
356523898	293	PREDICTED: uncharacterized protein LOC10	0.855	0.952	0.469	1e-43
356513137	285	PREDICTED: uncharacterized protein LOC10	0.843	0.964	0.451	4e-43
255644820	293	unknown [Glycine max]	0.855	0.952	0.463	1e-42
357521017	293	hypothetical protein MTR_8g103520 [Medic	0.849	0.945	0.443	2e-42
449524474	239	PREDICTED: uncharacterized protein LOC10	0.150	0.205	0.910	5e-29

>gi|224143539|ref|XP_002324990.1| predicted protein [Populus trichocarpa] gi|222866424|gb|EEF03555.1| predicted protein [Populus trichocarpa]

 Score =  256 bits (653), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 184/332 (55%), Positives = 216/332 (65%), Gaps = 46/332 (13%)

Query: 1   MENRLKLRISRLFRSSFGSCRSRNIS---ESDVVVKLTHKNSNSHMKMMMMTEPLLSPKP 57
           MENR K RISR+FR   GSCR+RN+S   E+ V V  THKN         M EPL  PK 
Sbjct: 1   MENRFKTRISRMFR---GSCRTRNLSDVIENAVFVPQTHKN-------FHMIEPL-PPKV 49

Query: 58  RPFPSICRPKCPEITTTHPQMMIFNNTCCIDTAPRSKVSEQYSPFALTTTTSNSSDNHNG 117
           RPFPSICR KCPE T       + N++       R K+S +Y P      T+N+S    G
Sbjct: 50  RPFPSICRHKCPEATN-----QVLNHS----IISRQKLSHRYPPL----ITANTS----G 92

Query: 118 HVMCPPASPTSPFNDNTLFYYGCNKEKKKHHSHSEKNRKKKRTHSRKTNRRSDSACIFSS 177
           H  CPPA P  P N    FY   + ++KK    S KNR KK+    K  + S    +F S
Sbjct: 93  HSSCPPAYPIFPLNP---FYKDLSFKEKKKSCRSVKNRSKKKNIISKKEQTS----LFRS 145

Query: 178 SSQES--FRG-WSWFSSDEDDNEKEDETETLFSSKTLSSDSSGSSLHRRHRSLRKKDGTR 234
           SSQ+S  F G + WFSS ED++++ DE++TLFSS++LSSDSSGS  H  H    KK  +R
Sbjct: 146 SSQDSTYFGGSYYWFSS-EDEDKRGDESDTLFSSRSLSSDSSGSLSHPSHG---KKFTSR 201

Query: 235 RRRAAARKLGPDVLPLPGGKVKDSFAVVKSSSDPYNDFRTSMVEMIVEKQIFAAKDLEQL 294
           RRRA  +     VLPL  GKVKDSFAVVKSSSDPYNDFRTSMVEMIVEKQIFAAKDLEQL
Sbjct: 202 RRRAKVKSSHVGVLPL-DGKVKDSFAVVKSSSDPYNDFRTSMVEMIVEKQIFAAKDLEQL 260

Query: 295 LQCFLSLNSHHHHRIILEVFTEIWEALFSDWS 326
           LQCFLSLNS+HHHRII+EVF EIWE LF +WS
Sbjct: 261 LQCFLSLNSYHHHRIIVEVFMEIWEVLFCNWS 292

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255546489|ref|XP_002514304.1| conserved hypothetical protein [Ricinus communis] gi|223546760|gb|EEF48258.1| conserved hypothetical protein [Ricinus communis]

 Score =  234 bits (598), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 179/337 (53%), Positives = 210/337 (62%), Gaps = 47/337 (13%)

Query: 1   MENRLKLRISRLFRSSFGSCRSRNISESDVVVK--LTHKNSNSHMKMMMMTEPLLSPKPR 58
           ME+RLK+RISR+FR SF SCR+ N+S  DVV K     +NS+ +     + EPL +P  +
Sbjct: 1   MEHRLKMRISRIFRGSFTSCRTGNLS--DVVEKPLCVPQNSHRNNDCFHLMEPLPAPYHK 58

Query: 59  ---PFPSICRPKCPEITTTHPQMMIFNNTCCIDTAPRSKVSEQYSPFALTTTTSNSSDNH 115
              PF SICR  CPE TT      IF         PR K+S +Y PF    T      N 
Sbjct: 59  SRVPFRSICRSNCPETTTKAITDSIF---------PRQKISRRYPPFVSANT------NG 103

Query: 116 NGHVMCPPASPTSPFNDNTLFYYGCNKEKKKHHSHSEKNRKKKRTHSRKTN--RRSDSAC 173
           N H  CPPASP SP  +   FY       K+ + + +K +K   +H +  N  RR  S  
Sbjct: 104 NRHT-CPPASPASPLTNP--FY-------KERNKNKKKKKKNNSSHVKLNNNSRRDVSLF 153

Query: 174 IFSSSSQESFRGWSWFSSDEDDNEKEDETETLFSSKTLSSDSSGSSLHRRHRSLRKKDGT 233
             SS     F G  WFSS+E+      E++TLFSS++LSSDSSGS  HR +RS RKK   
Sbjct: 154 SSSSQDSAYFEGCYWFSSEEE------ESDTLFSSRSLSSDSSGS--HRHYRSRRKKHTY 205

Query: 234 RRRRAAARKL----GPDVLPLPGGKVKDSFAVVKSSSDPYNDFRTSMVEMIVEKQIFAAK 289
            RRR  A       G  VLPL  GKVKDSFAVVKSSSDPYNDFRTSMVEMIVEKQIF+AK
Sbjct: 206 SRRRRTAAAAASTKGSSVLPL-HGKVKDSFAVVKSSSDPYNDFRTSMVEMIVEKQIFSAK 264

Query: 290 DLEQLLQCFLSLNSHHHHRIILEVFTEIWEALFSDWS 326
           +LEQLLQCFLSLNS HHHRIILEVFTEIWEALFS+WS
Sbjct: 265 ELEQLLQCFLSLNSSHHHRIILEVFTEIWEALFSNWS 301

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297738827|emb|CBI28072.3| unnamed protein product [Vitis vinifera]

 Score =  231 bits (589), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 162/333 (48%), Positives = 205/333 (61%), Gaps = 35/333 (10%)

Query: 1   MENRLKLRISRLFRSSFGSCRSRNISE---SDVVVKLTHKNSNSHMKMMMMTEPLLSPKP 57
           MENR KLRISR+FR SFGSCR R++S+   SDV+ K      N H    MM     SPKP
Sbjct: 496 MENRFKLRISRMFRRSFGSCRPRSMSDVIISDVMEKPVFVAHNQHQSFQMMEVS--SPKP 553

Query: 58  RPFPSICRPKCPEITTTHPQMMIFNNTCCI--DTAPRSKVSEQYSPFALTTTTSNSSDNH 115
           RPFPS+CRP+CPE      +  +  ++C +     PR KVSE+ S F             
Sbjct: 554 RPFPSMCRPRCPE------RCEMIEHSCIVAEKVLPRRKVSERCSVFGCGDAEGRK---- 603

Query: 116 NGHVMCPPASPTSPFNDNTLFYYGCNKEKKKHHSHSEKNRKKKRTHSRKTNRRSDSACIF 175
                CPPASP SP N    FY   N ++        K +KKK+ H +K   R  +  +F
Sbjct: 604 -----CPPASPASPLNA---FY---NVQEFGSKEKRSKKKKKKKAHVKKNKIREINY-MF 651

Query: 176 SSSSQES---FRGWSWFSSDEDDNEKEDETETLFSSKTLSSDSSGSSLHRRHRSLRKKDG 232
           SSSS ++   F G  WFSS+++  ++ +   +  S  + SS+S      RR++  R++ G
Sbjct: 652 SSSSADTNGGFVGGGWFSSEDEREDETETLFSSKSLSSDSSESQKRRSLRRNQRSRRRRG 711

Query: 233 TRRRRAAARKLGPDVLPLPGGKVKDSFAVVKSSSDPYNDFRTSMVEMIVEKQIFAAKDLE 292
              + +  ++   +VLPL G KVKDSFAVVK SSDPY+DFRTSMVEMIVEKQIFAAKDLE
Sbjct: 712 AINKGSCHQE--TNVLPLEG-KVKDSFAVVKRSSDPYSDFRTSMVEMIVEKQIFAAKDLE 768

Query: 293 QLLQCFLSLNSHHHHRIILEVFTEIWEALFSDW 325
           QLLQCFLSLNS HHHRII+EVFTEIWEALFS+W
Sbjct: 769 QLLQCFLSLNSSHHHRIIIEVFTEIWEALFSNW 801

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225445242|ref|XP_002280991.1| PREDICTED: uncharacterized protein LOC100266339 [Vitis vinifera]

 Score =  206 bits (524), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 161/334 (48%), Positives = 196/334 (58%), Gaps = 71/334 (21%)

Query: 1   MENRLKLRISRLFRSSFGSCRSRNISE---SDVVVKLTHKNSNSHMKMMMMTEPLLSPKP 57
           MENR KLRISR+FR SFGSCR R++S+   SDV+ K      N H    MM   + SPKP
Sbjct: 1   MENRFKLRISRMFRRSFGSCRPRSMSDVIISDVMEKPVFVAHNQHQSFQMME--VSSPKP 58

Query: 58  RPFPSICRPKCPEITTTHPQMMIFNNTCCI--DTAPRSKVSEQYSPFALTTTTSNSSDNH 115
           RPFPS+CRP+CPE      +  +  ++C +     PR KVSE+ S F             
Sbjct: 59  RPFPSMCRPRCPE------RCEMIEHSCIVAEKVLPRRKVSERCSVFGCGDAEGRK---- 108

Query: 116 NGHVMCPPASPTSPFNDNTLFYYGCNKEKKKHHSHSEKNRKKKRTHSRKTNRRSDSACIF 175
                CPPASP SP N    FY   N ++        K +KKK+ H +K   R  +  +F
Sbjct: 109 -----CPPASPASPLNA---FY---NVQEFGSKEKRSKKKKKKKAHVKKNKIREINY-MF 156

Query: 176 SSSSQES---FRGWSWFSSDEDDNEKEDETETLFSSKTLSSDSSGSSLHRRHRSLRKKDG 232
           SSSS ++   F G  WFSS+++  ++   TETLFSSK+LSSDSS                
Sbjct: 157 SSSSADTNGGFVGGGWFSSEDEREDE---TETLFSSKSLSSDSS---------------E 198

Query: 233 TRRRRAAARKLGPDVLPLPGGKVKDSFAVVKSSSDPYNDFRTSMVEMIVEKQIFAAKDLE 292
           +++RR                     FAVVK SSDPY+DFRTSMVEMIVEKQIFAAKDLE
Sbjct: 199 SQKRR---------------------FAVVKRSSDPYSDFRTSMVEMIVEKQIFAAKDLE 237

Query: 293 QLLQCFLSLNSHHHHRIILEVFTEIWEALFSDWS 326
           QLLQCFLSLNS HHHRII+EVFTEIWEALFS+WS
Sbjct: 238 QLLQCFLSLNSSHHHRIIIEVFTEIWEALFSNWS 271

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388503310|gb|AFK39721.1| unknown [Lotus japonicus]

 Score =  183 bits (464), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 139/325 (42%), Positives = 181/325 (55%), Gaps = 39/325 (12%)

Query: 2   ENRLKLRISRLFRSSFGSCRSRNISESDVVVKLTHKNSNSHMKMMMMTEPLLSPKPRPFP 61
           +NRLK+RISR+FRSSFGSCR+RN++  DV+ K       +      +  P  SPK R F 
Sbjct: 4   QNRLKMRISRMFRSSFGSCRTRNLT--DVMEKPVFNPPENLHSFHFIDPPSSSPKNRAFS 61

Query: 62  SICRPKCPEITTTHPQMMIFNNTCCIDTAPRSKVSEQYSPFALTTTTSNSSDNHNGHVMC 121
           S+ R +    T  H + +   ++    +  R+K+SE  SPF      + ++ N      C
Sbjct: 62  SVFRSE----TFDHRRAVSAKDS----STRRNKISECSSPFLWGVIRNGNAINSLDGRSC 113

Query: 122 PPASPTSPFNDNTLFYYGCNKEKKKHHSHSEKNRKKKRTHSRKTNRRSDSACIFSSSSQE 181
           PP SP +P N       G  KEK       +K +K  +  +R       ++C    +   
Sbjct: 114 PPVSPNTPLNHE----LGKTKEKNVRSKKKKKKKKHAQKKNRAREFFPFNSC----AKDT 165

Query: 182 SFRGWSWFSSDEDDNEKEDETETLFSSKTLSSDSSGSSLHRRHRSLRKKDGTRRRRAAAR 241
            F G+ W+SSDEDD     ET+TLFSS++LSSDSS S                RR+    
Sbjct: 166 DFGGYWWYSSDEDD-----ETDTLFSSRSLSSDSSRSR---------------RRKNDRS 205

Query: 242 KLGPDVLPLPGGKVKDSFAVVKSSSDPYNDFRTSMVEMIVEKQIFAAKDLEQLLQCFLSL 301
                VLPL  GKVKD+FA VK SSDP+ DFRTSM EMIVEKQIF+  DLE  LQCF  L
Sbjct: 206 SSDTGVLPL-QGKVKDTFAGVKRSSDPHRDFRTSMGEMIVEKQIFSPADLENFLQCFFFL 264

Query: 302 NSHHHHRIILEVFTEIWEALFSDWS 326
           NS+HHH+II+EVFTEIWEALF +W 
Sbjct: 265 NSNHHHQIIVEVFTEIWEALFFEWG 289

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356523898|ref|XP_003530571.1| PREDICTED: uncharacterized protein LOC100776613 [Glycine max]

 Score =  182 bits (463), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 156/332 (46%), Positives = 199/332 (59%), Gaps = 53/332 (15%)

Query: 3   NRLKLRISRLFRSSFGSCRSRNISESDVVVKLTHKNSNSHMKMMMMTEPLLSPKPRPFPS 62
           NRLKLRISR+FRSSFGSCR+RN++  DV+ K      +       + EP  SPK RP   
Sbjct: 5   NRLKLRISRMFRSSFGSCRTRNLT--DVMEKTVFAPPSP------IDEPP-SPKTRP--- 52

Query: 63  ICRPKCPEITTTHPQMMIFNNTCCID-----TAPRSKVSEQYSPFAL---TTTTSNSSDN 114
           I RPK              N+TC +      + PR K+SE  SPF +       +N+ + 
Sbjct: 53  IFRPKT------------INDTCILSFKDSHSLPRRKISEWSSPFVVGGGNKIKNNNLNL 100

Query: 115 HNGHVMCPPASPTSPFNDNTLFYYGCNKEKKKHHSHSEKNRKKKRTHSRKTNRRSDSACI 174
           + G + CPP SP    N      +G + +KK    +S  N+KKK+   ++  ++      
Sbjct: 101 NLGVMSCPPTSPNISLNTIHEHDFGYDDKKKVSTKNSRTNKKKKKKKKKRHAQKKREFFP 160

Query: 175 FSSSSQES-FRGWSWFSSDEDDNEKEDETETLFSSKTLSSDSSGSSLHRRHRSLRKKDGT 233
           F+S ++++ F G+ W+SSDEDD     ET+TLFSSK+LSSDSS S   RR+       G 
Sbjct: 161 FNSCAKDTNFGGYWWYSSDEDD-----ETDTLFSSKSLSSDSSRSRRRRRNNERSSDMG- 214

Query: 234 RRRRAAARKLGPDVLPLPGGKVKDSFAVVKSSSDPYNDFRTSMVEMIVEKQIFAAKDLEQ 293
                        VLPL  GKVKD+FAVVK SSDPY+DFRTSM+EMIVEKQIF+  DLE 
Sbjct: 215 -------------VLPL-NGKVKDTFAVVKRSSDPYSDFRTSMLEMIVEKQIFSPADLEN 260

Query: 294 LLQCFLSLNSHHHHRIILEVFTEIWEALFSDW 325
           LLQCFLSLNSHHHH+II+ VFTEIWEALFSDW
Sbjct: 261 LLQCFLSLNSHHHHKIIVHVFTEIWEALFSDW 292

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356513137|ref|XP_003525270.1| PREDICTED: uncharacterized protein LOC100819861 [Glycine max]

 Score =  181 bits (459), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 149/330 (45%), Positives = 191/330 (57%), Gaps = 55/330 (16%)

Query: 2   ENRLKLRISRLFRSSFGSCRSRNISESDVVVKLTHKNSNSHMKMMMMTEPLLSPKPRPFP 61
           +NRLKLRISR+FRSSFGSCR+RN+++                   +M + + +P P P  
Sbjct: 4   QNRLKLRISRMFRSSFGSCRTRNLTD-------------------VMEKAVFAP-PNP-- 41

Query: 62  SICRPKCPEITTTHPQMMIFNNTCCI---DTAPRSKVSEQYSPFAL---TTTTSNSSDNH 115
                    I    P     NNTC +   D+ PR K+SE  SPF L   +   +N+ + +
Sbjct: 42  ---------IEVEPPSPKTINNTCILSFKDSLPRRKISEWSSPFVLGGGSKNKNNNLNLN 92

Query: 116 NGHVMCPPASPTSPFNDNTLFYYGCNKEKKKHHSHSEKNRKKKRTHSRKTNRRSDSACIF 175
            G + CPP S     N      +G + +KK    +S   +KKK+   R+   + +     
Sbjct: 93  LGVMSCPPTSSNISLNTVHEQDFGYDDKKKVSTKNSRTKKKKKKKKKRRAQNKREFFPFN 152

Query: 176 SSSSQESFRGWSWFSSDEDDNEKEDETETLFSSKTLSSDSSGSSLHRRHRSLRKKDGTRR 235
           S +   +F G+ W+SSDEDD     ET+TLFSSK+LSSDSS S    R R          
Sbjct: 153 SCARDTNFGGYWWYSSDEDD-----ETDTLFSSKSLSSDSSRSRRRCRRR---------- 197

Query: 236 RRAAARKLGPDVLPLPGGKVKDSFAVVKSSSDPYNDFRTSMVEMIVEKQIFAAKDLEQLL 295
               +  +G  VLPL  GKVKD+FAVVK SSDPY+DFRTSM+EMIVEKQIF+  DLE LL
Sbjct: 198 ENDRSSDMG--VLPL-HGKVKDTFAVVKRSSDPYSDFRTSMLEMIVEKQIFSPADLENLL 254

Query: 296 QCFLSLNSHHHHRIILEVFTEIWEALFSDW 325
           QCFLSLNSHHHH+II+ VFTEIWEALFSDW
Sbjct: 255 QCFLSLNSHHHHKIIVHVFTEIWEALFSDW 284

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255644820|gb|ACU22911.1| unknown [Glycine max]

 Score =  179 bits (455), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 154/332 (46%), Positives = 198/332 (59%), Gaps = 53/332 (15%)

Query: 3   NRLKLRISRLFRSSFGSCRSRNISESDVVVKLTHKNSNSHMKMMMMTEPLLSPKPRPFPS 62
           NRLKLRISR+FRSSFGSCR+RN++  DV+ +      +       + EP  SPK RP   
Sbjct: 5   NRLKLRISRMFRSSFGSCRTRNLT--DVMERTVFAPPSP------IDEPP-SPKTRP--- 52

Query: 63  ICRPKCPEITTTHPQMMIFNNTCCID-----TAPRSKVSEQYSPFAL---TTTTSNSSDN 114
           I RPK              N+TC +      + PR K+SE  SPF +       +N+ + 
Sbjct: 53  IFRPKT------------INDTCILSFKDSHSLPRRKISEWSSPFVVGGGNKIKNNNLNL 100

Query: 115 HNGHVMCPPASPTSPFNDNTLFYYGCNKEKKKHHSHSEKNRKKKRTHSRKTNRRSDSACI 174
           + G + CPP SP    N      +G + +KK    +S  N+KKK+   ++  ++      
Sbjct: 101 NLGVMSCPPTSPNISLNTIHEHDFGYDDKKKVSTKNSRTNKKKKKKKKKRHAQKKREFFP 160

Query: 175 FSSSSQES-FRGWSWFSSDEDDNEKEDETETLFSSKTLSSDSSGSSLHRRHRSLRKKDGT 233
           F+S ++++ F G+ W+SSDEDD     ET+TLFSSK+LSSDSS S   RR+       G 
Sbjct: 161 FNSCAKDTNFGGYWWYSSDEDD-----ETDTLFSSKSLSSDSSRSRRPRRNNERSSDMG- 214

Query: 234 RRRRAAARKLGPDVLPLPGGKVKDSFAVVKSSSDPYNDFRTSMVEMIVEKQIFAAKDLEQ 293
                        VLPL  GKV D+FAVVK SSDPY+DFRTSM+EMIVEKQIF+  DLE 
Sbjct: 215 -------------VLPL-NGKVTDTFAVVKRSSDPYSDFRTSMLEMIVEKQIFSPADLEN 260

Query: 294 LLQCFLSLNSHHHHRIILEVFTEIWEALFSDW 325
           LLQCFLSLNSHHHH+II+ VFTEIWEALFSDW
Sbjct: 261 LLQCFLSLNSHHHHKIIVHVFTEIWEALFSDW 292

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357521017|ref|XP_003630797.1| hypothetical protein MTR_8g103520 [Medicago truncatula] gi|355524819|gb|AET05273.1| hypothetical protein MTR_8g103520 [Medicago truncatula]

 Score =  179 bits (453), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 148/334 (44%), Positives = 200/334 (59%), Gaps = 57/334 (17%)

Query: 7   LRISRLFRSSFGSCRSRNISESDVVVKLTHKNSNSHMKMMMMTEPLLSP------KPRPF 60
           +RISR+FRSSFGSC+++          LT           +M +PL +P         PF
Sbjct: 1   MRISRMFRSSFGSCKTKQ--------HLTD----------VMEKPLFAPPISSNTTVLPF 42

Query: 61  PSICRPKCPEITTTHPQMMI-FNNTCCIDTAPRSKVSEQYSPFALTTTTSNSSDNHNGHV 119
             I +PK P  T   P  +I F ++    + PR K+S   SPF      +NS+ N+N  +
Sbjct: 43  HPISKPK-PSQTIDDPSDIISFKDS---HSLPRRKISSCSSPFL---CGANSNINNNLKL 95

Query: 120 ---MCPPASPTSPFND-NTLFYY---GCNKEKKKHHSHSEKNRKKKRTHSRKTNRRSDSA 172
               CPP SP + F++ N+L +Y     + +   + + ++K +KKK    +K  ++ + A
Sbjct: 96  DRKPCPPVSPNTTFHEQNSLSFYEKTNSSMKNVTNKNKNKKKKKKKLKKKKKHTQKKNRA 155

Query: 173 CIFSSSSQES-FRGWSWFSSDEDDNEKEDETETLFSSKTLSSDSSGSSLHRRHRSLRKKD 231
             F+S ++++ F  + W+SSDEDD     ET+TLFSSK+LSSDSS S      R    + 
Sbjct: 156 FPFNSCAKDTNFDSYWWYSSDEDD-----ETDTLFSSKSLSSDSSKSRRRHSSRRKTDR- 209

Query: 232 GTRRRRAAARKLGPDVLPLPGGKVKDSFAVVKSSSDPYNDFRTSMVEMIVEKQIFAAKDL 291
                   +  +G  VLPL  GKVKD+FAVVK SSDPYNDFRTSMVEMIVEKQIF+  +L
Sbjct: 210 --------SSDMG--VLPL-NGKVKDTFAVVKRSSDPYNDFRTSMVEMIVEKQIFSPSEL 258

Query: 292 EQLLQCFLSLNSHHHHRIILEVFTEIWEALFSDW 325
           E LLQCFLSLNSHHHH+II+EV+TEIWEALFSDW
Sbjct: 259 ENLLQCFLSLNSHHHHKIIVEVYTEIWEALFSDW 292

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449524474|ref|XP_004169248.1| PREDICTED: uncharacterized protein LOC101225569 [Cucumis sativus]

 Score =  134 bits (337), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 61/67 (91%), Positives = 64/67 (95%)

Query: 259 FAVVKSSSDPYNDFRTSMVEMIVEKQIFAAKDLEQLLQCFLSLNSHHHHRIILEVFTEIW 318
           FAVVK SSDPYNDFR SM+EMIVEKQIF+AKDLEQLLQCFLSLNSHHHH +ILEVFTEIW
Sbjct: 171 FAVVKKSSDPYNDFRMSMLEMIVEKQIFSAKDLEQLLQCFLSLNSHHHHNVILEVFTEIW 230

Query: 319 EALFSDW 325
           EALFSDW
Sbjct: 231 EALFSDW 237

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	326
TAIR|locus:2183209	221	OFP8 "ovate family protein 8"	0.205	0.303	0.716	6.8e-30
TAIR|locus:2046308	315	OFP7 "ovate family protein 7"	0.214	0.222	0.614	1.4e-22
TAIR|locus:4515102951	183	AT2G36026 "AT2G36026" [Arabido	0.196	0.349	0.562	1.3e-18
TAIR|locus:504955854	159	OFP6 "ovate family protein 6"	0.202	0.415	0.606	2e-17
TAIR|locus:2064382	320	OFP2 "ovate family protein 2"	0.242	0.246	0.482	8.9e-17
TAIR|locus:2033060	315	OFP4 "ovate family protein 4"	0.199	0.206	0.523	1.6e-14
TAIR|locus:2180977	270	OFP1 "ovate family protein 1"	0.205	0.248	0.552	1.8e-14
TAIR|locus:2161198	296	OFP3 "ovate family protein 3"	0.199	0.219	0.560	2.5e-13
TAIR|locus:2117079	349	OFP5 "ovate family protein 5"	0.202	0.189	0.5	2.5e-11
TAIR|locus:2176297	196	OFP10 [Arabidopsis thaliana (t	0.230	0.382	0.36	3.5e-10

TAIR|locus:2183209 OFP8 "ovate family protein 8" [Arabidopsis thaliana (taxid:3702)]

 Score = 254 (94.5 bits), Expect = 6.8e-30, Sum P(2) = 6.8e-30
 Identities = 48/67 (71%), Positives = 57/67 (85%)

Query:   257 DSFAVVKSSSDPYNDFRTSMVEMIVEKQIFAAKDLEQLLQCFLSLNSHHHHRIILEVFTE 316
             +SFAVVK S DPY DFRTSMVEMIVE+QIFA  +L+QLLQCFLSLNS  HH++I++VF E
Sbjct:   154 ESFAVVKKSKDPYEDFRTSMVEMIVERQIFAPAELQQLLQCFLSLNSRQHHKVIVQVFLE 213

Query:   317 IWEALFS 323
             I+  LFS
Sbjct:   214 IYATLFS 220

GO:0005634 "nucleus" evidence=ISM

GO:0045892 "negative regulation of transcription, DNA-dependent" evidence=IDA

TAIR|locus:2046308 OFP7 "ovate family protein 7" [Arabidopsis thaliana (taxid:3702)]

 Score = 224 (83.9 bits), Expect = 1.4e-22, Sum P(2) = 1.4e-22
 Identities = 43/70 (61%), Positives = 52/70 (74%)

Query:   257 DSFAVVKSSSDPYNDFRTSMVEMIVEKQIFAAKDLEQLLQCFLSLNSHHHHRIILEVFTE 316
             +  AVVK S DPY DF+ SM+EMIVEK++F   +LEQLL CFLSLN+  HHR I+  F+E
Sbjct:   226 EGVAVVKKSEDPYEDFKGSMMEMIVEKKMFEVAELEQLLSCFLSLNAKRHHRAIVRAFSE 285

Query:   317 IWEALFSDWS 326
             IW ALFS  S
Sbjct:   286 IWVALFSGGS 295

GO:0005634 "nucleus" evidence=ISM

GO:0005886 "plasma membrane" evidence=IDA

GO:0045892 "negative regulation of transcription, DNA-dependent" evidence=IDA

TAIR|locus:4515102951 AT2G36026 "AT2G36026" [Arabidopsis thaliana (taxid:3702)]

 Score = 201 (75.8 bits), Expect = 1.3e-18, Sum P(2) = 1.3e-18
 Identities = 36/64 (56%), Positives = 48/64 (75%)

Query:   260 AVVKSSSDPYNDFRTSMVEMIVEKQIFAAKDLEQLLQCFLSLNSHHHHRIILEVFTEIWE 319
             AV K S DPY DFR SM++MI+E +I++  DL +LL CFLSLN  +HH II+  F+EIW+
Sbjct:    89 AVEKDSDDPYLDFRQSMLQMILENEIYSKNDLRELLHCFLSLNEPYHHGIIIRAFSEIWD 148

Query:   320 ALFS 323
              +FS
Sbjct:   149 GVFS 152

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:504955854 OFP6 "ovate family protein 6" [Arabidopsis thaliana (taxid:3702)]

 Score = 213 (80.0 bits), Expect = 2.0e-17, P = 2.0e-17
 Identities = 40/66 (60%), Positives = 51/66 (77%)

Query:   258 SFAVVKSSSDPYNDFRTSMVEMIVEKQIFAAKDLEQLLQCFLSLNSHHHHRIILEVFTEI 317
             S AV K S DPY DFR SM++MI+E QI++  +L +LLQCFLSLNSH+HH II+  F+EI
Sbjct:    67 SVAVEKDSDDPYLDFRQSMLQMILENQIYSKDELRELLQCFLSLNSHYHHGIIVRAFSEI 126

Query:   318 WEALFS 323
             WE + S
Sbjct:   127 WEDVSS 132

GO:0005634 "nucleus" evidence=ISM

GO:0045892 "negative regulation of transcription, DNA-dependent" evidence=IDA

TAIR|locus:2064382 OFP2 "ovate family protein 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 187 (70.9 bits), Expect = 8.9e-17, Sum P(2) = 8.9e-17
 Identities = 42/87 (48%), Positives = 54/87 (62%)

Query:   232 GTRRRRAAARKLGPDVLPLPGGKVKDSFAVVKSSSDPYNDFRTSMVEMIVEKQIFAAKDL 291
             GTRR  +   +   DVL        +SFAV+K S DP  DFR SM+EMI E  I A+KDL
Sbjct:   235 GTRRSTSRRSESKQDVL--------ESFAVMKRSVDPKKDFRESMIEMIEENNIRASKDL 286

Query:   292 EQLLQCFLSLNSHHHHRIILEVFTEIW 318
             E LL C+L+LN   +H +I+ VF +IW
Sbjct:   287 EDLLACYLTLNPKEYHDLIIHVFEQIW 313

GO:0005634 "nucleus" evidence=ISM

GO:0045892 "negative regulation of transcription, DNA-dependent" evidence=IDA

GO:0009407 "toxin catabolic process" evidence=RCA

GO:0010583 "response to cyclopentenone" evidence=RCA

GO:0048513 "organ development" evidence=RCA

TAIR|locus:2033060 OFP4 "ovate family protein 4" [Arabidopsis thaliana (taxid:3702)]

 Score = 188 (71.2 bits), Expect = 1.6e-14, P = 1.6e-14
 Identities = 34/65 (52%), Positives = 47/65 (72%)

Query:   254 KVKDSFAVVKSSSDPYNDFRTSMVEMIVEKQIFAAKDLEQLLQCFLSLNSHHHHRIILEV 313
             ++ DSFAV+KSS DP  DFR SMVEMI E  I  + D+E LL C+L+LN   +H +I++V
Sbjct:   240 QILDSFAVIKSSIDPSKDFRESMVEMIAENNIRTSNDMEDLLVCYLTLNPKEYHDLIIKV 299

Query:   314 FTEIW 318
             F ++W
Sbjct:   300 FVQVW 304

GO:0005634 "nucleus" evidence=ISM

GO:0045892 "negative regulation of transcription, DNA-dependent" evidence=IDA

GO:2000652 "regulation of secondary cell wall biogenesis" evidence=IMP

TAIR|locus:2180977 OFP1 "ovate family protein 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 185 (70.2 bits), Expect = 1.8e-14, P = 1.8e-14
 Identities = 37/67 (55%), Positives = 46/67 (68%)

Query:   252 GGKVKDSFAVVKSSSDPYNDFRTSMVEMIVEKQIFAAKDLEQLLQCFLSLNSHHHHRIIL 311
             G   + S AVVK+S DP  DF+ SM EMI E +I A KDLE+LL C+L LNS  +H II+
Sbjct:   193 GSSARRSRAVVKASVDPKRDFKESMEEMIAENKIRATKDLEELLACYLCLNSDEYHAIII 252

Query:   312 EVFTEIW 318
              VF +IW
Sbjct:   253 NVFKQIW 259

GO:0005634 "nucleus" evidence=ISM

GO:0005515 "protein binding" evidence=IPI

GO:0005730 "nucleolus" evidence=IDA

GO:0005856 "cytoskeleton" evidence=IDA

GO:0045892 "negative regulation of transcription, DNA-dependent" evidence=IDA

GO:0051510 "regulation of unidimensional cell growth" evidence=IMP

GO:0048513 "organ development" evidence=RCA

TAIR|locus:2161198 OFP3 "ovate family protein 3" [Arabidopsis thaliana (taxid:3702)]

 Score = 179 (68.1 bits), Expect = 2.5e-13, P = 2.5e-13
 Identities = 37/66 (56%), Positives = 46/66 (69%)

Query:   253 GKVKDSFAVVKSSSDPYNDFRTSMVEMIVEKQIFAAKDLEQLLQCFLSLNSHHHHRIILE 312
             G VK SFA+V SS DP  DFR SMVEMI+E ++   KDLE LL C+LSLNS  +H +I++
Sbjct:   221 GVVK-SFAIVLSSVDPEKDFRESMVEMIMENKMREQKDLEDLLACYLSLNSSEYHDVIIK 279

Query:   313 VFTEIW 318
              F   W
Sbjct:   280 AFENTW 285

GO:0005634 "nucleus" evidence=ISM

GO:0045892 "negative regulation of transcription, DNA-dependent" evidence=IDA

TAIR|locus:2117079 OFP5 "ovate family protein 5" [Arabidopsis thaliana (taxid:3702)]

 Score = 171 (65.3 bits), Expect = 2.5e-11, P = 2.5e-11
 Identities = 33/66 (50%), Positives = 47/66 (71%)

Query:   252 GGKVKDSFAVVKSSSDPYNDFRTSMVEMIVEKQIFAAKDLEQLLQCFLSLNSHHHHRIIL 311
             GG   +SFAVVK SSDP  DFR SM+EMI+E  I   ++L++LL C+L LN+  +H +I+
Sbjct:   277 GGMENESFAVVKCSSDPQKDFRDSMIEMIMENGINHPEELKELLVCYLRLNTDEYHDMII 336

Query:   312 EVFTEI 317
              VF ++
Sbjct:   337 SVFQQV 342

GO:0005634 "nucleus" evidence=ISM

GO:0005730 "nucleolus" evidence=IDA

GO:0030863 "cortical cytoskeleton" evidence=IDA

GO:0009553 "embryo sac development" evidence=IMP

GO:0045892 "negative regulation of transcription, DNA-dependent" evidence=IDA

TAIR|locus:2176297 OFP10 [Arabidopsis thaliana (taxid:3702)]

 Score = 146 (56.5 bits), Expect = 3.5e-10, P = 3.5e-10
 Identities = 27/75 (36%), Positives = 46/75 (61%)

Query:   243 LGPDVLPLPGGKVKDSFAVVKSSSDPYNDFRTSMVEMIVEKQIFAAKDLEQLLQCFLSLN 302
             + P VL  P  K+ +S A+ K S +P+ D++ SM +MI E+ I    +L++LL+CFL +N
Sbjct:    82 VSPTVLRSPCPKIDESVAMAKESINPFEDYKKSMNQMIEERYIETESELKELLRCFLDIN 141

Query:   303 SHHHHRIILEVFTEI 317
                 H +I+  F ++
Sbjct:   142 PSPQHNLIVRAFVDV 156

GO:0005634 "nucleus" evidence=ISM

GO:0045892 "negative regulation of transcription, DNA-dependent" evidence=IDA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: fgenesh4_pg.C_LG_XVIII000671 hypothetical protein (292 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	326
pfam04844	60	pfam04844, Ovate, Transcriptional repressor, ovate	3e-29
TIGR01568	66	TIGR01568, A_thal_3678, uncharacterized plant-spec	2e-20

>gnl|CDD|191110 pfam04844, Ovate, Transcriptional repressor, ovate

 Score =  106 bits (267), Expect = 3e-29
 Identities = 36/59 (61%), Positives = 43/59 (72%)

Query: 265 SSDPYNDFRTSMVEMIVEKQIFAAKDLEQLLQCFLSLNSHHHHRIILEVFTEIWEALFS 323
           SSDPY DFR SMVEMIVE  I    DLE+LL C+LSLN+  HHR I+  F ++W ALF+
Sbjct: 1   SSDPYEDFRRSMVEMIVENGIRDWDDLEELLACYLSLNAKEHHRAIVAAFADVWVALFA 59

This is a family of transcriptional repressors. In plants, these proteins are important regulators of growth and development. Length = 60

>gnl|CDD|130631 TIGR01568, A_thal_3678, uncharacterized plant-specific domain TIGR01568

 Score = 83.2 bits (206), Expect = 2e-20
 Identities = 34/66 (51%), Positives = 42/66 (63%), Gaps = 1/66 (1%)

Query: 259 FAVVKSSSDPYNDFRTSMVEMIVEKQIFA-AKDLEQLLQCFLSLNSHHHHRIILEVFTEI 317
            AV K S DPY DFR SM EMI E+++ A  K+LE+LL C+L LN    HR I+  F +I
Sbjct: 1   VAVAKESDDPYEDFRRSMEEMIEERELEADWKELEELLACYLDLNPKKSHRFIVRAFVDI 60

Query: 318 WEALFS 323
             AL S
Sbjct: 61  LSALLS 66

This model describes an uncharacterized domain of about 70 residues found exclusively in plants, generally toward the C-terminus of proteins of 200 to 350 amino acids in length. At least 14 such proteins are found in Arabidopsis thaliana. Other regions of these proteins tend to consist largely of low-complexity sequence. Length = 66

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	326
TIGR01568	66	A_thal_3678 uncharacterized plant-specific domain	100.0
PF04844	59	Ovate: Transcriptional repressor, ovate; InterPro:	99.97

>TIGR01568 A_thal_3678 uncharacterized plant-specific domain TIGR01568

Probab=100.00  E-value=9.4e-34  Score=217.40  Aligned_cols=65  Identities=51%  Similarity=0.830  Sum_probs=63.0

Q ss_pred             EEEEeecCChHHHHHHHHHHHHHhcCCC-ChhHHHHHHHHHHhcCCCCchhhHHHHHHHHHHHhcc
Q 041888          259 FAVVKSSSDPYNDFRTSMVEMIVEKQIF-AAKDLEQLLQCFLSLNSHHHHRIILEVFTEIWEALFS  323 (326)
Q Consensus       259 vAVVK~S~DPY~DFR~SMvEMI~ekgi~-d~~dLEELL~CYLsLNsk~hH~~Iv~AF~DLw~~Lfs  323 (326)
                      |||+|+|.|||.|||+||+|||+++|+. +|++|||||+|||+||+++||++|++||+|||.+||+
T Consensus         1 vAv~k~S~DPy~DFr~SM~EMI~~~~i~~~w~~LeeLL~cYL~LN~~~~H~~Iv~AF~dl~~~L~~   66 (66)
T TIGR01568         1 VAVAKESDDPYEDFRRSMEEMIEERELEADWKELEELLACYLDLNPKKSHRFIVRAFVDILSALLS   66 (66)
T ss_pred             CeeeeCCCChHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHhCCchhhhHHHHHHHHHHHHHhC
Confidence            6999999999999999999999999996 6999999999999999999999999999999999985

This model describes an uncharacterized domain of about 70 residues found exclusively in plants, generally toward the C-terminus of proteins of 200 to 350 amino acids in length. At least 14 such proteins are found in Arabidopsis thaliana. Other regions of these proteins tend to consist largely of low-complexity sequence.

>PF04844 Ovate: Transcriptional repressor, ovate; InterPro: IPR006458 This group of sequences contain an uncharacterised domain of about 70 residues found exclusively in plants, generally toward the C terminus of proteins of 200 to 350 amino acids in length

Probab=99.97  E-value=5.4e-32  Score=203.57  Aligned_cols=59  Identities=61%  Similarity=1.015  Sum_probs=57.9

Q ss_pred             cCChHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHhcCCCCchhhHHHHHHHHHHHhcc
Q 041888          265 SSDPYNDFRTSMVEMIVEKQIFAAKDLEQLLQCFLSLNSHHHHRIILEVFTEIWEALFS  323 (326)
Q Consensus       265 S~DPY~DFR~SMvEMI~ekgi~d~~dLEELL~CYLsLNsk~hH~~Iv~AF~DLw~~Lfs  323 (326)
                      |.|||+|||+||+|||+|+|+.+|++|||||+|||+||+++||++||+||+|||.+||+
T Consensus         1 S~DP~~DFr~SM~EMI~~~~i~~~~~LeeLL~cYL~LN~~~~H~~Iv~aF~dv~~~l~s   59 (59)
T PF04844_consen    1 SSDPYEDFRESMVEMIEENGIRDWDDLEELLACYLSLNSPEHHKFIVEAFVDVWVELFS   59 (59)
T ss_pred             CCCHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhCChhhhhHHHHHHHHHHHHHhC
Confidence            78999999999999999999999999999999999999999999999999999999985

At least 14 such proteins are found in Arabidopsis thaliana (Mouse-ear cress). Other regions of these proteins tend to consist largely of low-complexity sequence. Function is not known.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	326
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-04

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 42.1 bits (98), Expect = 2e-04
 Identities = 45/302 (14%), Positives = 85/302 (28%), Gaps = 92/302 (30%)

Query: 3   NRLKLRISRLFRS--------------------SFG-SCR----SRNISESDVVVKLTHK 37
           + ++  + RL +S                    +F  SC+    +R    +D +   T  
Sbjct: 228 HSIQAELRRLLKSKPYENCLLVLLNVQNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTT 287

Query: 38  NSNSHMKMMMMTEPLLSPKPRP-FPSI--CRPKC--PEITTTHPQM--MIFNNTCCIDTA 90
               H+ +   +  L   + +        CRP+    E+ TT+P+   +I       D  
Sbjct: 288 ----HISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRLSII--AESIRDGL 341

Query: 91  PRSKVSEQYSPFALTTTTSNSSDNHNGHVMCPPASPTSPFNDNTLFYYGCNKEKKKHHSH 150
                 +  +   LTT   +S +         PA     F+  ++F              
Sbjct: 342 ATWDNWKHVNCDKLTTIIESSLNVLE------PAEYRKMFDRLSVF-------------- 381

Query: 151 SEKNRKKKRTHSRKTNRRSDSACIFSSSSQESFRGWSWFSSDEDDNEKEDETETLFSSKT 210
              +           +  +    +             WF   + D              +
Sbjct: 382 -PPS----------AHIPTILLSLI------------WFDVIKSDVM---VVVNKLHKYS 415

Query: 211 L---SSDSSGSSLHRRHRSLRKKDGTRRRRAAARKLGPDVLPLPGGKVKDSFAVVKSSSD 267
           L       S  S+   +  L+ K       A  R +  D   +P  K  DS  ++    D
Sbjct: 416 LVEKQPKESTISIPSIYLELKVK--LENEYALHRSI-VDHYNIP--KTFDSDDLIPPYLD 470

Query: 268 PY 269
            Y
Sbjct: 471 QY 472

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00