Citrus Sinensis ID: 041897

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------12
Protein Sequence
MAQALLVATCIAMLVQSGQLPQTPGLAIPPGWGSGDVLKCWSSLANTEGCVTSIFSSIFSLNFNSIAPACCKAFVAIDAGCFHLMFPWNPFFPQLLNDFCARIEGGTRGVPPSPPLSA
Secondary Structure (PSIPRED)
cHHHHHHHHHHHHHHcccccccccccccccccccccHHHHHHHccccccHHHHHHHHHHHcccccccHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccEEEEHHHHHHHEcccccccccccccccccccccHHHHHHHHHHccccHHHHHHHHHHHcccccccHHHHHHHHHHHHccccccccccccccHHHHHHccccccccccccccccccc
Coil and Loop (DISEMBL)
MAQALLVATCIAMLVqsgqlpqtpglaippgwgsgdvlkcwsslantegcVTSIFSSIFslnfnsiapaCCKAFVAIDagcfhlmfpwnpffpqLLNDFCArieggtrgvppspplsa
Flexible Loop (DISEMBL)
MAQALLVATCIAMLVQSGQLPQTPGLAIPPGWGSGDVLKCWSSLANTEGCVTSIFSSIFSLNFNSIAPACCKAFVAIDAGCFHLMFPWNPFFPQLLNDFCARIEGgtrgvppspplsa
Low Complexity Region (SEG)
MAQALLVATCIAMLVQSGQLPQTPGLAIPPGWGSGDVLKCWSSLANTEGCVTsifssifslnfnsiAPACCKAFVAIDAGCFHLMFPWNPFFPQLLNDFCARIEGGTRGVPPSPPLSA
Disordered region (IsUnstruct)
***ALLVATCIAMLVQSGQLPQTPGLAIPPGWGSGDVLKCWSSLANTEGCVTSIFSSIFSLNFNSIAPACCKAFVAIDAGCFHLMFPWNPFFPQLLNDFCARIEG*************
Disordered Region (DISOPRED)
*AQALLVATCIAMLVQSGQLP**********WGSGDVLKCWSSLANTEGCVTSIFSSIFSLNFNSIAPACCKAFVAIDAGCFHLMFPWNPFFPQLLNDFC******************
Disordered Region (DISEMBL)
MAQALLVATCIAMLVQSGQLPQTPGLAIPPGWGSGDVLKCWSSLANTEGCVTSIFSSIFSLNFNSIAPACCKAFVAIDAGCFHLMFPWNPFFPQLLNDFCARIEGGTRG*********
Disordered Region (DISPRO)
MAQALLVATCIAMLVQSGQLPQTPGLAIPPGWGSGDVLKCWSSLANTEGCVTSIFSSIFSLNFNSIAPACCKAFVAIDAGCFHLMFPWNPFFPQLLNDFCARIEG*T***********
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
SSSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MAQALLVATCIAMLVQSGQLPQTPGLAIPPGWGSGDVLKCWSSLANTEGCVTSIFSSIFSLNFNSIAPACCKAFVAIDAGCFHLMFPWNPFFPQLLNDFCARIEGGTRGVPPSPPLSA
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	118
297792645	120	predicted protein [Arabidopsis lyrata su	0.822	0.808	0.538	4e-19
297792639	120	predicted protein [Arabidopsis lyrata su	0.855	0.841	0.527	6e-19
21536633	121	unknown [Arabidopsis thaliana]	0.855	0.834	0.522	1e-18
18423455	121	uncharacterized protein [Arabidopsis tha	0.872	0.851	0.495	2e-18
22327797	120	uncharacterized protein [Arabidopsis tha	0.855	0.841	0.509	7e-18
116830025	121	hypothetical protein At5g52965 [Arabidop	0.855	0.834	0.509	7e-18
297826047	120	predicted protein [Arabidopsis lyrata su	0.745	0.733	0.566	2e-17
22331701	119	uncharacterized protein [Arabidopsis tha	0.822	0.815	0.5	8e-17
42570937	120	uncharacterized protein [Arabidopsis tha	0.864	0.85	0.486	1e-16
297802440	121	hypothetical protein ARALYDRAFT_912865 [	0.838	0.818	0.495	3e-16

>gi|297792645|ref|XP_002864207.1| predicted protein [Arabidopsis lyrata subsp. lyrata] gi|297310042|gb|EFH40466.1| predicted protein [Arabidopsis lyrata subsp. lyrata]

 Score = 98.6 bits (244), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 56/104 (53%), Positives = 67/104 (64%), Gaps = 7/104 (6%)

Query: 5   LLVATCIAMLVQSG----QLPQT-PGLAIPPGWGSGDVLKCWSSLANTEGCVTSIFSSIF 59
           L+V+ C+A+ V  G    Q P T PGL  PPG    D++KCWSSL N EGCV  I  SIF
Sbjct: 11  LMVSLCVAIFVTQGVAHTQTPPTVPGL-FPPG-SPIDLVKCWSSLFNVEGCVLEIAKSIF 68

Query: 60  SLNFNSIAPACCKAFVAIDAGCFHLMFPWNPFFPQLLNDFCARI 103
           S  F ++  ACCKAF+ +D  C+  MFP NPFFP LL D CARI
Sbjct: 69  SGKFENVEAACCKAFLTLDTNCWPQMFPLNPFFPPLLKDICARI 112

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297792639|ref|XP_002864204.1| predicted protein [Arabidopsis lyrata subsp. lyrata] gi|297310039|gb|EFH40463.1| predicted protein [Arabidopsis lyrata subsp. lyrata]

 Score = 98.2 bits (243), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 57/108 (52%), Positives = 70/108 (64%), Gaps = 7/108 (6%)

Query: 1   MAQALLVATCIAMLVQSG----QLPQT-PGLAIPPGWGSGDVLKCWSSLANTEGCVTSIF 55
           ++ +L+V+ C+A+ V  G    Q P T PGL  PPG    D++KCWSSL N EGCV  I 
Sbjct: 7   LSISLMVSLCVAIFVTQGVAHTQTPPTVPGL-FPPGLPI-DLVKCWSSLFNVEGCVLEIA 64

Query: 56  SSIFSLNFNSIAPACCKAFVAIDAGCFHLMFPWNPFFPQLLNDFCARI 103
            SIFS  F ++  ACCKAF  +DA C+  MFP NPFFP LL D CARI
Sbjct: 65  KSIFSGKFENVEAACCKAFSTLDANCWPQMFPLNPFFPPLLKDNCARI 112

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|21536633|gb|AAM60965.1| unknown [Arabidopsis thaliana]

 Score = 97.1 bits (240), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 57/109 (52%), Positives = 69/109 (63%), Gaps = 8/109 (7%)

Query: 1   MAQALLVATCIAMLVQSG----QLPQT--PGLAIPPGWGSGDVLKCWSSLANTEGCVTSI 54
           ++  L+V+ C+A+ V  G    Q P T  PGL  PPG    D++KCWSSL N EGCV  I
Sbjct: 7   LSVILIVSLCVAIFVTQGVAHMQTPPTTVPGL-FPPGLPI-DLVKCWSSLFNVEGCVLEI 64

Query: 55  FSSIFSLNFNSIAPACCKAFVAIDAGCFHLMFPWNPFFPQLLNDFCARI 103
             SIFS  F ++  ACCKAF  +DA C+  MFP NPFFP LL D CARI
Sbjct: 65  AKSIFSGKFENVEAACCKAFSTLDANCWPHMFPLNPFFPPLLKDSCARI 113

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|18423455|ref|NP_568782.1| uncharacterized protein [Arabidopsis thaliana] gi|109946527|gb|ABG48442.1| At5g05770 [Arabidopsis thaliana] gi|332008902|gb|AED96285.1| uncharacterized protein [Arabidopsis thaliana]

 Score = 96.7 bits (239), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 53/107 (49%), Positives = 67/107 (62%), Gaps = 4/107 (3%)

Query: 1   MAQALLVATCIAMLVQSGQLP-QTPGLAIPPGWGSG---DVLKCWSSLANTEGCVTSIFS 56
           ++  L+V+ C+A+ V  G    QTP   +P  +  G   D++KCWSSL N EGCV  I  
Sbjct: 7   LSVILIVSLCVAIFVTQGVAHMQTPPTTVPGIFPPGLPIDLVKCWSSLFNVEGCVLEIAK 66

Query: 57  SIFSLNFNSIAPACCKAFVAIDAGCFHLMFPWNPFFPQLLNDFCARI 103
           SIFS  F ++  ACCKAF  +DA C+  MFP NPFFP LL D CARI
Sbjct: 67  SIFSGKFENVEAACCKAFSTLDANCWPHMFPLNPFFPPLLKDSCARI 113

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|22327797|ref|NP_680427.1| uncharacterized protein [Arabidopsis thaliana] gi|91805701|gb|ABE65579.1| hypothetical protein At5g52965 [Arabidopsis thaliana] gi|332008900|gb|AED96283.1| uncharacterized protein [Arabidopsis thaliana]

 Score = 94.7 bits (234), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 55/108 (50%), Positives = 68/108 (62%), Gaps = 7/108 (6%)

Query: 1   MAQALLVATCIAMLVQSG----QLPQT-PGLAIPPGWGSGDVLKCWSSLANTEGCVTSIF 55
           ++ +L+V+ C A+ V  G    Q P T PGL +P      D++KCWSSL N EGCV  I 
Sbjct: 7   LSISLMVSLCAAIFVSQGVAHMQTPPTVPGLLLP--GLPIDLVKCWSSLFNVEGCVLEIA 64

Query: 56  SSIFSLNFNSIAPACCKAFVAIDAGCFHLMFPWNPFFPQLLNDFCARI 103
            SIFS  F ++  ACCKAF  +DA C+  MFP NPFFP LL D CARI
Sbjct: 65  KSIFSGKFENVEAACCKAFSTLDANCWPHMFPLNPFFPPLLKDNCARI 112

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|116830025|gb|ABK27970.1| hypothetical protein At5g52965 [Arabidopsis thaliana]

 Score = 94.7 bits (234), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 55/108 (50%), Positives = 68/108 (62%), Gaps = 7/108 (6%)

Query: 1   MAQALLVATCIAMLVQSG----QLPQT-PGLAIPPGWGSGDVLKCWSSLANTEGCVTSIF 55
           ++ +L+V+ C A+ V  G    Q P T PGL +P      D++KCWSSL N EGCV  I 
Sbjct: 7   LSISLMVSLCAAIFVSQGVAHMQTPPTVPGLLLP--GLPIDLVKCWSSLFNVEGCVLEIA 64

Query: 56  SSIFSLNFNSIAPACCKAFVAIDAGCFHLMFPWNPFFPQLLNDFCARI 103
            SIFS  F ++  ACCKAF  +DA C+  MFP NPFFP LL D CARI
Sbjct: 65  KSIFSGKFENVEAACCKAFSTLDANCWPHMFPLNPFFPPLLKDNCARI 112

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297826047|ref|XP_002880906.1| predicted protein [Arabidopsis lyrata subsp. lyrata] gi|297326745|gb|EFH57165.1| predicted protein [Arabidopsis lyrata subsp. lyrata]

 Score = 93.2 bits (230), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 51/90 (56%), Positives = 59/90 (65%), Gaps = 2/90 (2%)

Query: 14  LVQSGQLPQTPGLAIPPGWGSGDVLKCWSSLANTEGCVTSIFSSIFSLNFNSIAPACCKA 73
           + +  + P  PGL  PPG    D++KCWSSL N EGCV  I  SIFS  F +I  ACCKA
Sbjct: 25  VAEMQKQPTFPGL-FPPGLPI-DLVKCWSSLFNVEGCVLEISKSIFSGKFENIEGACCKA 82

Query: 74  FVAIDAGCFHLMFPWNPFFPQLLNDFCARI 103
           F A+DA C+  MFP NPFFP LL D CARI
Sbjct: 83  FSALDANCWPHMFPLNPFFPPLLKDICARI 112

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|22331701|ref|NP_680118.1| uncharacterized protein [Arabidopsis thaliana] gi|332644923|gb|AEE78444.1| uncharacterized protein [Arabidopsis thaliana]

 Score = 90.9 bits (224), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 51/102 (50%), Positives = 63/102 (61%), Gaps = 5/102 (4%)

Query: 5   LLVATCIAMLVQSG---QLPQTPGLAIPPGWGSGDVLKCWSSLANTEGCVTSIFSSIFSL 61
           +++A  I + V+ G    LP  PGL  PPG    D++KCWSSL N +GCV  I+ SIFS 
Sbjct: 11  VILAMTIVLQVRPGFSQALPTIPGL-FPPGLPI-DIIKCWSSLFNVQGCVQEIYKSIFSG 68

Query: 62  NFNSIAPACCKAFVAIDAGCFHLMFPWNPFFPQLLNDFCARI 103
            F SI   CCK F AID  C+  MFP NPFFP +L + C RI
Sbjct: 69  QFASIEAPCCKTFSAIDTNCWPHMFPLNPFFPPILKNNCERI 110

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|42570937|ref|NP_973542.1| uncharacterized protein [Arabidopsis thaliana] gi|330252878|gb|AEC07972.1| uncharacterized protein [Arabidopsis thaliana]

 Score = 90.1 bits (222), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 56/115 (48%), Positives = 66/115 (57%), Gaps = 13/115 (11%)

Query: 5   LLVATCIAMLVQSG-----QLPQTPGLAIPPGWGSGDVLKCWSSLANTEGCVTSIFSSIF 59
           L+ + C  + V  G     + P  PGL  P      D++KC SSL+N EGCV  I  SIF
Sbjct: 11  LMASLCGTIFVTQGVAEMQKPPMFPGLFQP--GSPVDLVKCMSSLSNVEGCVLEISKSIF 68

Query: 60  SLNFNSIAPACCKAFVAIDAGCFHLMFPWNPFFPQLLNDFCARIEGGTRGVPPSP 114
           S  F +I  ACCKAF A+DA C+  MFP NPFFP LL D CARI      VP SP
Sbjct: 69  SGKFENIEGACCKAFSALDANCWPEMFPLNPFFPPLLKDICARI------VPKSP 117

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297802440|ref|XP_002869104.1| hypothetical protein ARALYDRAFT_912865 [Arabidopsis lyrata subsp. lyrata] gi|297314940|gb|EFH45363.1| hypothetical protein ARALYDRAFT_912865 [Arabidopsis lyrata subsp. lyrata]

 Score = 89.4 bits (220), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 50/101 (49%), Positives = 62/101 (61%), Gaps = 2/101 (1%)

Query: 5   LLVATCIAMLVQSG--QLPQTPGLAIPPGWGSGDVLKCWSSLANTEGCVTSIFSSIFSLN 62
           L+VA C A+L+  G     +TP  +  P     D+ KCWSSL NT+GCV  +  S+FS  
Sbjct: 13  LVVAICAAILITPGIAHDDKTPPRSQFPPDFPIDLEKCWSSLFNTQGCVFELLKSVFSGQ 72

Query: 63  FNSIAPACCKAFVAIDAGCFHLMFPWNPFFPQLLNDFCARI 103
           F ++  ACCKAF  IDA C+  MFP NPFFP LL D CA I
Sbjct: 73  FGNVGVACCKAFSTIDANCWPHMFPLNPFFPPLLKDNCAHI 113

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	118
TAIR|locus:505006689	121	AT5G52975 "AT5G52975" [Arabido	0.864	0.842	0.465	4e-19
TAIR|locus:504954846	120	AT5G52965 "AT5G52965" [Arabido	0.872	0.858	0.465	1.4e-18
TAIR|locus:4010713622	120	AT2G14378 [Arabidopsis thalian	0.864	0.85	0.447	6.7e-17
TAIR|locus:504954909	207	AT5G54062 "AT5G54062" [Arabido	0.872	0.497	0.412	1.8e-16
TAIR|locus:1006230005	120	AT2G27315 "AT2G27315" [Arabido	0.864	0.85	0.434	1.8e-16
TAIR|locus:504955577	119	AT3G48675 "AT3G48675" [Arabido	0.822	0.815	0.421	3.7e-16
TAIR|locus:504955408	120	AT4G35165 "AT4G35165" [Arabido	0.864	0.85	0.438	4.7e-16
TAIR|locus:504954855	123	AT5G51105 "AT5G51105" [Arabido	0.830	0.796	0.366	5.6e-13
TAIR|locus:504954984	168	AT5G53905 "AT5G53905" [Arabido	0.533	0.375	0.441	1.2e-10
TAIR|locus:2164758	103	AT5G48210 "AT5G48210" [Arabido	0.737	0.844	0.313	3.4e-06

TAIR|locus:505006689 AT5G52975 "AT5G52975" [Arabidopsis thaliana (taxid:3702)]

 Score = 229 (85.7 bits), Expect = 4.0e-19, P = 4.0e-19
 Identities = 54/116 (46%), Positives = 63/116 (54%)

Query:     5 LLVATCIAMLVQSG----QLPQT--PGLAIPPGWGSGDVLKCWSSLANTEGCVTXXXXXX 58
             L+V+ C+A+ V  G    Q P T  PG+  PPG    D++KCWSSL N EGCV       
Sbjct:    11 LIVSLCVAIFVTQGVAHMQTPPTTVPGI-FPPGLPI-DLVKCWSSLFNVEGCVLEIAKSI 68

Query:    59 XXXXXXXXAPACCKAFVAIDAGCFHLMFPWNPFFPQLLNDFCARIEGGTRGVPPSP 114
                       ACCKAF  +DA C+  MFP NPFFP LL D CARI      VP SP
Sbjct:    69 FSGKFENVEAACCKAFSTLDANCWPHMFPLNPFFPPLLKDSCARI------VPNSP 118

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:504954846 AT5G52965 "AT5G52965" [Arabidopsis thaliana (taxid:3702)]

 Score = 224 (83.9 bits), Expect = 1.4e-18, P = 1.4e-18
 Identities = 54/116 (46%), Positives = 63/116 (54%)

Query:     4 ALLVATCIAMLVQSG----QLPQT-PGLAIPPGWGSGDVLKCWSSLANTEGCVTXXXXXX 58
             +L+V+ C A+ V  G    Q P T PGL +P G    D++KCWSSL N EGCV       
Sbjct:    10 SLMVSLCAAIFVSQGVAHMQTPPTVPGLLLP-GLPI-DLVKCWSSLFNVEGCVLEIAKSI 67

Query:    59 XXXXXXXXAPACCKAFVAIDAGCFHLMFPWNPFFPQLLNDFCARIEGGTRGVPPSP 114
                       ACCKAF  +DA C+  MFP NPFFP LL D CARI      VP SP
Sbjct:    68 FSGKFENVEAACCKAFSTLDANCWPHMFPLNPFFPPLLKDNCARI------VPNSP 117

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:4010713622 AT2G14378 [Arabidopsis thaliana (taxid:3702)]

 Score = 208 (78.3 bits), Expect = 6.7e-17, P = 6.7e-17
 Identities = 51/114 (44%), Positives = 59/114 (51%)

Query:     5 LLVATCIAMLVQSG----QLPQTPGLAIPPGWGSGDVLKCWSSLANTEGCVTXXXXXXXX 60
             L+VA C A+L+  G    + P  P    PP +   DV KCWSSL NT+GCV         
Sbjct:    13 LVVALCAAILITPGIAHDEQPP-PRSQFPPDFPI-DVEKCWSSLFNTQGCVFELLKSVFS 70

Query:    61 XXXXXXAPACCKAFVAIDAGCFHLMFPWNPFFPQLLNDFCARIEGGTRGVPPSP 114
                     ACCKAF  +DA C+  MFP NPFFP LL D CA I      VP SP
Sbjct:    71 GRFGDVGVACCKAFSTVDANCWPHMFPLNPFFPPLLKDNCAHI------VPNSP 118

GO:0005576 "extracellular region" evidence=ISM

TAIR|locus:504954909 AT5G54062 "AT5G54062" [Arabidopsis thaliana (taxid:3702)]

 Score = 204 (76.9 bits), Expect = 1.8e-16, P = 1.8e-16
 Identities = 45/109 (41%), Positives = 56/109 (51%)

Query:     1 MAQALLVATCIAMLVQSG--QLPQTPGLAIPPGWGSG-DVLKCWSSLANTEGCVTXXXXX 57
             ++  L+V  C   LV+ G  QLP + G ++P   GS  D+ KCWSSL N  GC       
Sbjct:     9 LSTILVVTLCATTLVKPGLAQLPTSAGFSLP---GSQVDLAKCWSSLLNIHGCNIEIFKS 65

Query:    58 XXXXXXXXXAPACCKAFVAIDAGCFHLMFPWNPFFPQLLNDFCARIEGG 106
                         CCKAF  +DA C+  MFP NP FP LL D C+RI  G
Sbjct:    66 VLTGKFENVGSTCCKAFTEVDAKCWPKMFPLNPLFPPLLKDGCSRIISG 114

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:1006230005 AT2G27315 "AT2G27315" [Arabidopsis thaliana (taxid:3702)]

 Score = 204 (76.9 bits), Expect = 1.8e-16, P = 1.8e-16
 Identities = 50/115 (43%), Positives = 59/115 (51%)

Query:     5 LLVATCIAMLVQSG-----QLPQTPGLAIPPGWGSGDVLKCWSSLANTEGCVTXXXXXXX 59
             L+ + C  + V  G     + P  PGL   PG    D++KC SSL+N EGCV        
Sbjct:    11 LMASLCGTIFVTQGVAEMQKPPMFPGL-FQPG-SPVDLVKCMSSLSNVEGCVLEISKSIF 68

Query:    60 XXXXXXXAPACCKAFVAIDAGCFHLMFPWNPFFPQLLNDFCARIEGGTRGVPPSP 114
                      ACCKAF A+DA C+  MFP NPFFP LL D CARI      VP SP
Sbjct:    69 SGKFENIEGACCKAFSALDANCWPEMFPLNPFFPPLLKDICARI------VPKSP 117

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0016020 "membrane" evidence=ISS

TAIR|locus:504955577 AT3G48675 "AT3G48675" [Arabidopsis thaliana (taxid:3702)]

 Score = 201 (75.8 bits), Expect = 3.7e-16, P = 3.7e-16
 Identities = 43/102 (42%), Positives = 54/102 (52%)

Query:     5 LLVATCIAMLVQSG---QLPQTPGLAIPPGWGSGDVLKCWSSLANTEGCVTXXXXXXXXX 61
             +++A  I + V+ G    LP  PGL  PPG    D++KCWSSL N +GCV          
Sbjct:    11 VILAMTIVLQVRPGFSQALPTIPGL-FPPGLPI-DIIKCWSSLFNVQGCVQEIYKSIFSG 68

Query:    62 XXXXXAPACCKAFVAIDAGCFHLMFPWNPFFPQLLNDFCARI 103
                     CCK F AID  C+  MFP NPFFP +L + C RI
Sbjct:    69 QFASIEAPCCKTFSAIDTNCWPHMFPLNPFFPPILKNNCERI 110

GO:0003674 "molecular_function" evidence=ND

GO:0005739 "mitochondrion" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:504955408 AT4G35165 "AT4G35165" [Arabidopsis thaliana (taxid:3702)]

 Score = 200 (75.5 bits), Expect = 4.7e-16, P = 4.7e-16
 Identities = 50/114 (43%), Positives = 58/114 (50%)

Query:     5 LLVATCIAMLVQSG----QLPQTPGLAIPPGWGSGDVLKCWSSLANTEGCVTXXXXXXXX 60
             L+VA C A+L+  G    + P  P    PP +   DV KCW+SL NT+GCV         
Sbjct:    13 LVVALCAAILITPGIAHDEQPP-PRSQFPPDFPI-DVEKCWASLFNTQGCVFELLKSVFS 70

Query:    61 XXXXXXAPACCKAFVAIDAGCFHLMFPWNPFFPQLLNDFCARIEGGTRGVPPSP 114
                     ACCKA   IDA C+  MFP NPFFP LL D CA I      VP SP
Sbjct:    71 GQFGNVGVACCKALSTIDANCWPHMFPLNPFFPPLLKDNCAHI------VPNSP 118

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:504954855 AT5G51105 "AT5G51105" [Arabidopsis thaliana (taxid:3702)]

 Score = 171 (65.3 bits), Expect = 5.6e-13, P = 5.6e-13
 Identities = 40/109 (36%), Positives = 55/109 (50%)

Query:     4 ALLVATCIAMLVQSGQLPQTPGLAIP--------PGW-GSGDVLKCWSSLANTEGCVTXX 54
             +LLV  CIA  V + QLPQ P +  P        PG  GS D+ KCWS++ +  GC    
Sbjct:     8 SLLVVVCIAASVNA-QLPQFPPIMFPFPNPFKPSPGMAGSPDLSKCWSTVMDLPGCFEEI 66

Query:    55 XXXXXXXXXXXXAPACCKAFVAIDAGCFHLMFPWNPFFPQLLNDFCARI 103
                          PACCKAF+  +A C   + P NPFFP ++   C+++
Sbjct:    67 QQAVMSGKFEGVGPACCKAFLDAEANCLPNL-PSNPFFPPMMKHQCSKM 114

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

TAIR|locus:504954984 AT5G53905 "AT5G53905" [Arabidopsis thaliana (taxid:3702)]

 Score = 149 (57.5 bits), Expect = 1.2e-10, P = 1.2e-10
 Identities = 30/68 (44%), Positives = 36/68 (52%)

Query:    36 DVLKCWSSLANTEGCVTXXXXXXXXXXXXXXAPACCKAFVAIDAGCFHLMFPWNPFFPQL 95
             D+ KCWSSL N +GC                    CKAF  +DA C+  MFP NPFFP L
Sbjct:    24 DLTKCWSSLFNVQGCNIEILKYVLTAKFES-----CKAFTEVDANCWPKMFPLNPFFPPL 78

Query:    96 LNDFCARI 103
             + D C+RI
Sbjct:    79 VKDGCSRI 86

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2164758 AT5G48210 "AT5G48210" [Arabidopsis thaliana (taxid:3702)]

 Score = 107 (42.7 bits), Expect = 3.4e-06, P = 3.4e-06
 Identities = 31/99 (31%), Positives = 39/99 (39%)

Query:     5 LLVATCIAMLVQSGQLPQTPGLAIPPGWGSGDVLKCWSSLANTEGCVTXXXXXXXXXXXX 64
             LL   CI +   S  LP +P     P       L CWSSL     CV             
Sbjct:     9 LLPVVCIVVFATSQPLP-SP----QPSQ-----LDCWSSLEVIPDCVPEIFRSITNGQFG 58

Query:    65 XXAPACCKAFVAIDAGCFHLMFPWNPFFP--QLLNDFCA 101
                P+CC AF+ +D  C   MF + P  P  + L D C+
Sbjct:    59 NVGPSCCHAFIGLDTECIPQMFIFAPLIPPSRRLRDHCS 97

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0010584 "pollen exine formation" evidence=RCA

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Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

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Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: Al_scaffold_0008_1678 annotation not avaliable (120 aa) (Arabidopsis lyrata)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	118
PLN00213	118	PLN00213, PLN00213, predicted protein; Provisional	2e-13
pfam05617	67	pfam05617, Prolamin_like, Prolamin-like	3e-11

>gnl|CDD|165778 PLN00213, PLN00213, predicted protein; Provisional

 Score = 61.2 bits (148), Expect = 2e-13
 Identities = 44/113 (38%), Positives = 62/113 (54%), Gaps = 8/113 (7%)

Query: 4   ALLVATCIAMLVQSGQLPQTPG-LAIPPGW----GSGDVLKCWSSLANTEGCVTSIFSSI 58
            LL   CI + V + QLPQ P  L     +    G  D+ KC+SS+ +  GC+  I  SI
Sbjct: 8   LLLAVLCIIVSVNA-QLPQFPAQLPFLFPFQLIPGLPDITKCFSSVMDIPGCIAEISQSI 66

Query: 59  FSLNFNSIAPACCKAFVAIDAGCFHLMFPWNPFFPQLLNDFCARIEGGTRGVP 111
           F+  F ++ PACCKAF+  DA       P+ PFFP +L + C+R+ G T  +P
Sbjct: 67  FTGKFGNLGPACCKAFL--DADNCIPKIPFIPFFPPMLKEQCSRVAGATPPIP 117

Length = 118

>gnl|CDD|218659 pfam05617, Prolamin_like, Prolamin-like

 Score = 54.4 bits (131), Expect = 3e-11
 Identities = 30/68 (44%), Positives = 41/68 (60%), Gaps = 6/68 (8%)

Query: 39  KCWSSLANT-EGCVTSIFSSIFSLNFNSIAPACCKAFVAIDAGCF---HLMFPWNPFF-P 93
           KCWS+ A    GCV  IF+SIF  N  ++ P CC+A + I   C+     MFP  PFF P
Sbjct: 1   KCWSACAVKIPGCVDEIFASIFG-NKGNLGPDCCQAILKIGDDCWPALFKMFPSLPFFPP 59

Query: 94  QLLNDFCA 101
           +LL ++C+
Sbjct: 60  KLLKNYCS 67

Both DUF784 and DUF1278 members are found to be expressed in the plant embryo sac and are regulated by the Myb98 transcription factor. Computational analysis has revealed that they are homologous to the plant prolamin superfamily (Protease inhibitor-seed storage-LTP family, pfam00234). In contrast to the typical prolamin members that have eight conserved Cys residues forming four pairs of disulfide bonds, both DUF784 and DUF1278 domains only contain six conserved Cys residues that may form three pairs of disulfide bonds. These two domains may have potential functions in lipid transfer or protection during plant embryo sac development and reproduction. This family has been merged with the DUF1278 family. Length = 67

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	118
PLN00213	118	predicted protein; Provisional	100.0
PF05617	70	Prolamin_like: Prolamin-like; InterPro: IPR008502	99.83

>PLN00213 predicted protein; Provisional

Probab=100.00  E-value=2.4e-42  Score=251.52  Aligned_cols=104  Identities=40%  Similarity=0.852  Sum_probs=94.4

Q ss_pred             hHHHHHHHHHHhhcCCCCCCCCCCcC-------CCCCCCCCchhhhhhccCCcchHHHHHHHHhhcccCccchhhhHHHH
Q 041897            3 QALLVATCIAMLVQSGQLPQTPGLAI-------PPGWGSGDVLKCWSSLANTEGCVTSIFSSIFSLNFNSIAPACCKAFV   75 (118)
Q Consensus         3 ~~ll~~~ci~~~v~~gl~p~~p~~~~-------~pg~~~~d~~~Cwssl~~v~gC~~EI~~s~~~G~~~~Igp~CC~Ai~   75 (118)
                      .+|||++||+++||+|| ||+|..|.       +||+ | |+.||||||++++||+.||++|+++|||++||++|||||+
T Consensus         7 ~~ll~v~cIvvsVna~l-pqf~~~fp~~~p~~~~pg~-p-d~~kCwSSl~~vpGCv~EI~~si~~gkf~~Ig~aCCKAf~   83 (118)
T PLN00213          7 FLLLAVLCIIVSVNAQL-PQFPAQLPFLFPFQLIPGL-P-DITKCFSSVMDIPGCIAEISQSIFTGKFGNLGPACCKAFL   83 (118)
T ss_pred             HHHHHHHHHHheeccCC-CCCCCCCCCCCCccCCCCC-c-cHHHHHHHHcCCcchHHHHHHHHHhchhcccchHHHHHHH
Confidence            47899999999999999 77665542       4776 4 9999999999999999999999999999999999999999


Q ss_pred             hhhcCcccccCCCCCCChHHHHhhhhcccCCCCCCC
Q 041897           76 AIDAGCFHLMFPWNPFFPQLLNDFCARIEGGTRGVP  111 (118)
Q Consensus        76 ~i~~~CwP~mFp~~Pf~p~lLK~~Cs~~~~~~~p~p  111 (118)
                      +.| +|||+| |++||||++||++|++++.+++|.|
T Consensus        84 ~~d-nCwP~~-P~~P~fPp~LK~~Cs~i~~~~~~~~  117 (118)
T PLN00213         84 DAD-NCIPKI-PFIPFFPPMLKEQCSRVAGATPPIP  117 (118)
T ss_pred             hhh-ccccCC-cCCCccchHHHHHHhcccCCCCCCC
Confidence            965 999995 9999999999999999999888764

>PF05617 Prolamin_like: Prolamin-like; InterPro: IPR008502 This entry consists of several proteins of unknown function found exclusively in Arabidopsis thaliana

Probab=99.83  E-value=3.1e-21  Score=126.16  Aligned_cols=63  Identities=44%  Similarity=0.900  Sum_probs=60.9

Q ss_pred             hhhhhccCCcchHHHHHHHHhhcccCccchhhhHHHHhhhcCcccc---cCCCCCCChH----HHHhhhh
Q 041897           39 KCWSSLANTEGCVTSIFSSIFSLNFNSIAPACCKAFVAIDAGCFHL---MFPWNPFFPQ----LLNDFCA  101 (118)
Q Consensus        39 ~Cwssl~~v~gC~~EI~~s~~~G~~~~Igp~CC~Ai~~i~~~CwP~---mFp~~Pf~p~----lLK~~Cs  101 (118)
                      |||++++++++|++||+.+|++|++.+||++||++|++++++||++   ||++.|+|++    .||++|+
T Consensus         1 kc~~~~~~~~~C~~eI~~~~~~g~~~~i~~~CC~~i~~~g~~C~~~l~~~~~~~p~~~~~~r~~l~~~C~   70 (70)
T PF05617_consen    1 KCLSSCAKSPGCGDEIFNSFFNGNKKNIGPECCKAINKMGKDCHPALFKMFPFTPFFKPLLRDLLWNHCS   70 (70)
T ss_pred             ChHHHcCCccchHHHHHHHHHcCCCCCCChHHHHHHHHHhHhHHHHHHHHccCCCCccchhHHHHHhhcC
Confidence            7999999999999999999999997899999999999999999999   9999999999    9999996

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00