Citrus Sinensis ID: 041927

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------24
Protein Sequence
MFKRLSAFVFLGTMIALIQAVIITATGEVPVLELYMHDILGGSSPTARPVTGLLGNIYNGQVPFARPVGLRPPEGGVVIPNANGAIPTVNGNNGIPLGTGLAGTTSANGQNPQTQLGPDGLGLGFGTITVIDDILTSNPELGSQAIGRAQGVYIASSVDGTSQMMTFTAMIEGGEYGDSLNFYGLYKIGSTMSRLSVTGGTGKFKNARGFAEVRALIPPGQHVTDGAETLLRITVHLNY
Secondary Structure (PSIPRED)
cccHHHHHHHHHHHHHHHHHHHHcccccccEEEEEEEEccccccccccEEEEEEEEEEcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEEccccccccccccccEEEEEEEEEEEccccccEEEEEEEEEEccccccEEEEEEccccccccEEEEEEEcccccccEEEEEEEEEEccccccEEcccEEEEEEEEEEEc
Secondary Structure Prediction (SSPRO)
cHHHHcHHHHHHHHHHHHHHHHHHcccccccEEEEHHHccccccccccEEEEEEEEEcccccccccccccccccccccccccccccccccccccccEEccccccccHccccccccccccccccccEEEEEEccccccccccccccccccEEEEEEcccccccEEEEEEEEEEccccccEEEEEccccccccccEcEEEccccHEEEccEEEEEEEEcccccccccccEEEEEEEEEEEc
Coil and Loop (DISEMBL)
MFKRLSAFVFLGTMIALIQAVIITATGEVPVLELYMhdilggssptarpvtgllgniyngqvpfarpvglrppeggvvipnangaiptvngnngiplgtglagttsangqnpqtqlgpdglglgfgTITVIDDiltsnpelgsqAIGRAQGVYIassvdgtsQMMTFTAMIeggeygdslnFYGLYKIGstmsrlsvtggtgkfknargfaevralippgqhvtdgAETLLRITVHLNY
Flexible Loop (DISEMBL)
MFKRLSAFVFLGTMIALIQAVIITATGEVPVLELYMHDILGGSSPTARPVTGLLGNIYNGQVPFARPVGLRPPEGGVVIPNANGAIPTVNGNNGIPLGTGLAGTTSANGQNPQTQLGPDGLGLGFGTITVIDDILTSNPELGSQAIGRAQGVYIASSVDGTSQMMTFTAMIEGGEYGDSLNFYGLYKIGSTMSRLSVTGGTGKFKNARGFAEVRAlippgqhvtdgaeTLLRITVHLNY
Low Complexity Region (SEG)
MFKRLSAFVFLGTMIALIQAVIITATGEVPVLELYMHDILGGSSPTARPVTGLLGNIYNGQVPFARPVGLRPPEGGVVIPNANGAIPTVNGNNGIPLGTGLAGTTSANGQNPQTQLGPDGLGLGFGTITVIDDILTSNPELGSQAIGRAQGVYIASSVDGTSQMMTFTAMIEGGEYGDSLNFYGLYKIGSTMSRLSVTGGTGKFKNARGFAEVRALIPPGQHVTDGAETLLRITVHLNY
Disordered region (IsUnstruct)
****LSAFVFLGTMIALIQAVIITATGEVPVLELYMHDILGGSSPTARPVTGLLGNIYNGQVPFARPVGLRPPEGGVVIPNANGAIPTVNGNNGIPLGTGL*****************DGLGLGFGTITVIDDILTSNPELGSQAIGRAQGVYIASSVDGTSQMMTFTAMIEGGEYGDSLNFYGLYKIGSTMSRLSVTGGTGKFKNARGFAEVRALIPPGQHVTDGAETLLRITVH***
Disordered Region (DISOPRED)
*****SA*VFLGTMIALIQAVIITATGEVPVLELYMHDILGGSSPTARPVTGLLGNIYNGQVPFARPVGLRPPEGGVVIPNANGAIPTVNGNNGIPLGTGLAGTTS****************LGFGTITVIDDILTSNPELGSQAIGRAQGVYIASSVDGTSQMMTFTAMIEGGEYGDSLNFYGLYKIGSTMSRLSVTGGTGKFKNARGFAEVRALIPPGQHVTDGAETLLRITVHLNY
Disordered Region (DISEMBL)
MFKRLSAFVFLGTMIALIQAVIITATGEVPVLELYMHDILGGSSPTARPVTGLLGNIYNGQVPFARPVGLRPPEGGVVIPNANGAIPTVNGNNGIPLGTGLAGTTSANGQNPQTQLGPDGLGLGFGTITVIDDILTSNPELGSQAIGRAQGVYIASSVDGTSQMMTFTAMIEGGEYGDSLNFYGLYKIGSTMSRLSVTGGTGKFKNARGFAEVRALIPPGQHVTDGAETLLRITVHLNY
Disordered Region (DISPRO)
MFKRLSAFVFLGTMIALIQAVIITATGEVPVLELYMHDILGGSSPTARPVTGLLGNIYNGQVPFARPVGLRPPEGGVVIPNANGAIPTVNGNNGIPLGTGLAGTTSANGQNPQTQLGPDGLGLGFGTITVIDDILTSNPELGSQAIGRAQGVYIASSVDGTSQMMTFTAMIEGGEYGDSLNFYGLYKIGSTMSRLSVTGGTGKFKNARGFAEVRALIPPGQHVTDGAETLLRITVHLNY
Transmembrane Helix (TMHMM)
iiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
SSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MFKRLSAFVFLGTMIALIQAVIITATGEVPVLELYMHDILGGSSPTARPVTGLLGNIYNGQVPFARPVGLRPPEGGVVIPNANGAIPTVNGNNGIPLGTGLAGTTSANGQNPQTQLGPDGLGLGFGTITVIDDILTSNPELGSQAIGRAQGVYIASSVDGTSQMMTFTAMIEGGEYGDSLNFYGLYKIGSTMSRLSVTGGTGKFKNARGFAEVRALIPPGQHVTDGAETLLRITVHLNY
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	239	2.2.26 [Sep-21-2011]
P13240	184	Disease resistance respon	N/A	no	0.472	0.614	0.341	4e-09

>sp|P13240|DR206_PEA Disease resistance response protein 206 OS=Pisum sativum GN=PI206 PE=2 SV=2

 Score = 61.6 bits (148), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 41/120 (34%), Positives = 60/120 (50%), Gaps = 7/120 (5%)

Query: 98  GTGLAGTTSANGQNPQ----TQLGPDGLGLGFGTITVIDDILTSNPELGSQAIGRAQGVY 153
           G   A  TSA    P+    T+L P      FG I V DD +T +  L S+ +GRAQG Y
Sbjct: 45  GKNAANATSAIVAAPEGVSLTKLAPQS---HFGNIIVFDDPITLSHSLSSKQVGRAQGFY 101

Query: 154 IASSVDGTSQMMTFTAMIEGGEYGDSLNFYGLYKIGSTMSRLSVTGGTGKFKNARGFAEV 213
           I  + +  +  ++FT ++    +  ++ F G   I +    +SVTGGTG F   RG A +
Sbjct: 102 IYDTKNTYTSWLSFTFVLNSTHHQGTITFAGADPIVAKTRDISVTGGTGDFFMHRGIATI 161

Pisum sativum (taxid: 3888)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	239
225433385	253	PREDICTED: uncharacterized protein LOC10	0.991	0.936	0.745	3e-97
224072612	252	predicted protein [Populus trichocarpa]	1.0	0.948	0.742	6e-97
225433383	249	PREDICTED: uncharacterized protein LOC10	0.995	0.955	0.74	4e-96
297741898	255	unnamed protein product [Vitis vinifera]	0.995	0.933	0.722	4e-95
449432468	249	PREDICTED: uncharacterized protein LOC10	0.991	0.951	0.721	5e-94
224057678	213	predicted protein [Populus trichocarpa]	0.861	0.967	0.831	2e-93
388497130	250	unknown [Medicago truncatula]	0.983	0.94	0.75	2e-92
297835480	243	disease resistance-responsive family pro	0.991	0.975	0.702	1e-89
15229564	243	disease resistance-responsive, dirigent	0.991	0.975	0.697	2e-89
297804978	244	disease resistance-responsive family pro	0.953	0.934	0.721	8e-89

>gi|225433385|ref|XP_002285613.1| PREDICTED: uncharacterized protein LOC100261265 [Vitis vinifera]

 Score =  360 bits (924), Expect = 3e-97,   Method: Compositional matrix adjust.
 Identities = 190/255 (74%), Positives = 210/255 (82%), Gaps = 18/255 (7%)

Query: 1   MFKRLSAFVFLGTMIALIQ-AVIITAT------GEVPVLELYMHDILGGSSPTARPVTGL 53
           MFK+ S  V +  +IA I  A I++A       GE PVLELYMHDILGG++PTARP+TGL
Sbjct: 1   MFKQSSLDVSITMLIASIWMATIVSAVDLATTGGEAPVLELYMHDILGGNNPTARPITGL 60

Query: 54  LGNIYNGQVPFARPVGLRPPEGGVVIPNANGAIPTVNGNNGIPLGTGLAGTTSANGQNPQ 113
           LGNIY+GQVPFARPVG  PP+ GV IPNANGAIP VNGNNGIPLGTGLAG  SA G  P 
Sbjct: 61  LGNIYSGQVPFARPVGFNPPKDGVAIPNANGAIPLVNGNNGIPLGTGLAG--SAFGGKPN 118

Query: 114 ---------TQLGPDGLGLGFGTITVIDDILTSNPELGSQAIGRAQGVYIASSVDGTSQM 164
                    TQLGPDGLGLGFGTITVIDD+LTS PELGSQ+IG+AQGVY+ASS DGT+QM
Sbjct: 119 DPNQNGKTATQLGPDGLGLGFGTITVIDDVLTSGPELGSQSIGKAQGVYVASSADGTTQM 178

Query: 165 MTFTAMIEGGEYGDSLNFYGLYKIGSTMSRLSVTGGTGKFKNARGFAEVRALIPPGQHVT 224
           M FTAM+EGGEYGD+LNF+G+YKIGS MSRLSVTGGTGKFKNARGF EVR LIP GQHVT
Sbjct: 179 MAFTAMMEGGEYGDNLNFFGVYKIGSAMSRLSVTGGTGKFKNARGFGEVRPLIPSGQHVT 238

Query: 225 DGAETLLRITVHLNY 239
           DGAETLLRITVHL+Y
Sbjct: 239 DGAETLLRITVHLSY 253

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224072612|ref|XP_002303806.1| predicted protein [Populus trichocarpa] gi|222841238|gb|EEE78785.1| predicted protein [Populus trichocarpa]

 Score =  359 bits (921), Expect = 6e-97,   Method: Compositional matrix adjust.
 Identities = 187/252 (74%), Positives = 207/252 (82%), Gaps = 13/252 (5%)

Query: 1   MFKRLSAFVFLGTMIALIQAVIITAT------GEVPVLELYMHDILGGSSPTARPVTGLL 54
           M K  S +VF+  +IA +   I  A       G  PVLELYMHDILGGS+PTARP+TGLL
Sbjct: 1   MLKLSSPYVFIAVLIAALHTAIYVAAIEPVPAGGEPVLELYMHDILGGSNPTARPITGLL 60

Query: 55  GNIYNGQVPFARPVGLRPPEGGVVIPNANGAIPTVNGNNGIPLGTGLAGTTSA---NGQN 111
           GNIY+GQVPFARPVG  PP+G V IPNANGA+PTVNG NGIPLGTGLAGTT A   NGQN
Sbjct: 61  GNIYSGQVPFARPVGFVPPKGAVAIPNANGALPTVNGLNGIPLGTGLAGTTFAGNPNGQN 120

Query: 112 P----QTQLGPDGLGLGFGTITVIDDILTSNPELGSQAIGRAQGVYIASSVDGTSQMMTF 167
                QTQLGPDGLGLGFGTITVIDD LT++PELGSQ +G+AQGVY+ASS DG++QMM F
Sbjct: 121 TNGQIQTQLGPDGLGLGFGTITVIDDTLTNSPELGSQQLGKAQGVYVASSADGSTQMMAF 180

Query: 168 TAMIEGGEYGDSLNFYGLYKIGSTMSRLSVTGGTGKFKNARGFAEVRALIPPGQHVTDGA 227
           TAM EGGE+GDSLNFYG+Y+IGS MSRLSVTGGTGKFKNA GFAEVR LIPPGQ VTDGA
Sbjct: 181 TAMFEGGEFGDSLNFYGIYRIGSAMSRLSVTGGTGKFKNAIGFAEVRGLIPPGQAVTDGA 240

Query: 228 ETLLRITVHLNY 239
           ETLLRI+VHL Y
Sbjct: 241 ETLLRISVHLKY 252

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225433383|ref|XP_002282961.1| PREDICTED: uncharacterized protein LOC100258026 [Vitis vinifera]

 Score =  356 bits (914), Expect = 4e-96,   Method: Compositional matrix adjust.
 Identities = 185/250 (74%), Positives = 207/250 (82%), Gaps = 12/250 (4%)

Query: 1   MFKRLSAFVFLGTMIAL------IQAVIITATGEVPVLELYMHDILGGSSPTARPVTGLL 54
           M K LS  +F   ++A+      + AV + A G   V+ELYMHDILGGSSPTARPVTGLL
Sbjct: 1   MLKPLSTSIFFTLLVAIGHIATTVAAVEVAAEGGEHVIELYMHDILGGSSPTARPVTGLL 60

Query: 55  GNIYNGQVPFARPVGLRPPEGGVVIPNANGAIPTVNGNNGIPLGTGLAGTT-----SANG 109
           GNIY+GQVPFARPVG  PP+GGV IPNANGA+PTVN  NGIPLGTGLAGT      + N 
Sbjct: 61  GNIYSGQVPFARPVGFLPPKGGVAIPNANGALPTVN-TNGIPLGTGLAGTNFVGNPNRNN 119

Query: 110 QNPQTQLGPDGLGLGFGTITVIDDILTSNPELGSQAIGRAQGVYIASSVDGTSQMMTFTA 169
             P TQLGPDGLGLGFGTITVIDD+LTS P+LGSQ +G+AQGVY+ASSVDGT+QMMTFTA
Sbjct: 120 GRPATQLGPDGLGLGFGTITVIDDVLTSGPDLGSQQMGKAQGVYVASSVDGTTQMMTFTA 179

Query: 170 MIEGGEYGDSLNFYGLYKIGSTMSRLSVTGGTGKFKNARGFAEVRALIPPGQHVTDGAET 229
           MIEGGEYGDS+NF+G+YKIGSTMSRLSVTGGTGKFKNA GFAE+R LIP GQHVTDG ET
Sbjct: 180 MIEGGEYGDSINFFGVYKIGSTMSRLSVTGGTGKFKNACGFAEIRPLIPSGQHVTDGVET 239

Query: 230 LLRITVHLNY 239
           LLRIT HL+Y
Sbjct: 240 LLRITAHLSY 249

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297741898|emb|CBI33333.3| unnamed protein product [Vitis vinifera]

 Score =  353 bits (905), Expect = 4e-95,   Method: Compositional matrix adjust.
 Identities = 185/256 (72%), Positives = 206/256 (80%), Gaps = 18/256 (7%)

Query: 1   MFKRLSAFVFLGTMIAL------IQAVIITATGEVPVLELYMHDILGGSSPTARPVTGLL 54
           M K LS  +F   ++A+      + AV + A G   V+ELYMHDILGGSSPTARPVTGLL
Sbjct: 1   MLKPLSTSIFFTLLVAIGHIATTVAAVEVAAEGGEHVIELYMHDILGGSSPTARPVTGLL 60

Query: 55  GNIYNGQVPFARPVGLRPPEGGVVIPNANGAIPTVNGNNGIPLGTGLAGTTSANGQNPQ- 113
           GNIY+GQVPFARPVG  PP+GGV IPNANGA+PTVN  NGIPLGTGLAGT      N + 
Sbjct: 61  GNIYSGQVPFARPVGFLPPKGGVAIPNANGALPTVN-TNGIPLGTGLAGTNFVGNPNRKP 119

Query: 114 ----------TQLGPDGLGLGFGTITVIDDILTSNPELGSQAIGRAQGVYIASSVDGTSQ 163
                     TQLGPDGLGLGFGTITVIDD+LTS PELGSQ+IG+AQGVY+ASS DGT+Q
Sbjct: 120 NDPNQNGKTATQLGPDGLGLGFGTITVIDDVLTSGPELGSQSIGKAQGVYVASSADGTTQ 179

Query: 164 MMTFTAMIEGGEYGDSLNFYGLYKIGSTMSRLSVTGGTGKFKNARGFAEVRALIPPGQHV 223
           MM FTAM+EGGEYGD+LNF+G+YKIGS MSRLSVTGGTGKFKNARGF EVR LIP GQHV
Sbjct: 180 MMAFTAMMEGGEYGDNLNFFGVYKIGSAMSRLSVTGGTGKFKNARGFGEVRPLIPSGQHV 239

Query: 224 TDGAETLLRITVHLNY 239
           TDGAETLLRITVHL+Y
Sbjct: 240 TDGAETLLRITVHLSY 255

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449432468|ref|XP_004134021.1| PREDICTED: uncharacterized protein LOC101219771 [Cucumis sativus] gi|449487506|ref|XP_004157660.1| PREDICTED: uncharacterized LOC101219771 [Cucumis sativus]

 Score =  349 bits (896), Expect = 5e-94,   Method: Compositional matrix adjust.
 Identities = 179/248 (72%), Positives = 203/248 (81%), Gaps = 11/248 (4%)

Query: 3   KRLSAFVFLGTMIALIQ-------AVIITATGEVPVLELYMHDILGGSSPTARPVTGLLG 55
           ++ S   FL T I ++        AV        PVLE YMHDILGG+SPTARP+TGLLG
Sbjct: 2   RQASFPAFLATAIIVVHFVAFRSAAVTANVGAHEPVLEFYMHDILGGASPTARPITGLLG 61

Query: 56  NIYNGQVPFARPVGLRPPEGGVVIPNANGAIPTVNGNNGIPLGTGLAGTTSA---NGQN- 111
           NIY GQVPFA P+G  PP+GGV IPNANGA+PTVNG NGIPLGTGL+GT+ A   N QN 
Sbjct: 62  NIYTGQVPFATPIGFLPPDGGVAIPNANGALPTVNGINGIPLGTGLSGTSFAGNPNPQNV 121

Query: 112 PQTQLGPDGLGLGFGTITVIDDILTSNPELGSQAIGRAQGVYIASSVDGTSQMMTFTAMI 171
           PQTQLGPDGLGLGFGTITVIDD+LT++PELGSQ+IG+AQGVY+ASS DGT+QMM FTAM+
Sbjct: 122 PQTQLGPDGLGLGFGTITVIDDVLTTSPELGSQSIGQAQGVYVASSADGTTQMMAFTAMV 181

Query: 172 EGGEYGDSLNFYGLYKIGSTMSRLSVTGGTGKFKNARGFAEVRALIPPGQHVTDGAETLL 231
           EGGEYGDSLNFYG+++IGS  S LSVTGGTGKFKNARG AEVR+LIPPGQHV DGAETLL
Sbjct: 182 EGGEYGDSLNFYGVFRIGSPSSHLSVTGGTGKFKNARGIAEVRSLIPPGQHVADGAETLL 241

Query: 232 RITVHLNY 239
           R+ VHL Y
Sbjct: 242 RVLVHLTY 249

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224057678|ref|XP_002299294.1| predicted protein [Populus trichocarpa] gi|222846552|gb|EEE84099.1| predicted protein [Populus trichocarpa]

 Score =  347 bits (890), Expect = 2e-93,   Method: Compositional matrix adjust.
 Identities = 178/214 (83%), Positives = 192/214 (89%), Gaps = 8/214 (3%)

Query: 32  LELYMHDILGGSSPTARPVTGLLGNIYNGQVPFARPVGLRPPEGGVVIPNANGAIPTVNG 91
           LELYMHDILGGS+PTARP+TGLLGNIY+GQVPFARP+G  PP G V IPNANG IPTVNG
Sbjct: 1   LELYMHDILGGSNPTARPITGLLGNIYSGQVPFARPIGFVPPNG-VAIPNANGVIPTVNG 59

Query: 92  NNGIPLGTGLAGTTSA---NGQN----PQTQLGPDGLGLGFGTITVIDDILTSNPELGSQ 144
            NGIPLGTGLAGTT A   NGQN    PQTQLGPDGLGLGFGTITVIDDILTS+PELGSQ
Sbjct: 60  INGIPLGTGLAGTTFAGQPNGQNLNGNPQTQLGPDGLGLGFGTITVIDDILTSSPELGSQ 119

Query: 145 AIGRAQGVYIASSVDGTSQMMTFTAMIEGGEYGDSLNFYGLYKIGSTMSRLSVTGGTGKF 204
           ++G+AQGVY+ASS DG++QMM FTAM EGGEYGDSLNFYG+YKIGSTMSRLSVTGGTGKF
Sbjct: 120 SVGKAQGVYVASSADGSTQMMAFTAMFEGGEYGDSLNFYGMYKIGSTMSRLSVTGGTGKF 179

Query: 205 KNARGFAEVRALIPPGQHVTDGAETLLRITVHLN 238
           KNARGFAEVR+LIP GQH  DGAETLLR TVHL+
Sbjct: 180 KNARGFAEVRSLIPSGQHFIDGAETLLRFTVHLS 213

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388497130|gb|AFK36631.1| unknown [Medicago truncatula]

 Score =  344 bits (883), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 180/240 (75%), Positives = 200/240 (83%), Gaps = 5/240 (2%)

Query: 5   LSAFVFLGTMIALIQAVI-ITATGEVPVLELYMHDILGGSSPTARPVTGLLGNIYNGQVP 63
           L+  V    +I  I AV  I ATG+ P++EL+MHDILGGS+PTARPVTGLLGNIY+GQVP
Sbjct: 11  LAMLVAFSYLIMSITAVDPIAATGKEPIIELFMHDILGGSNPTARPVTGLLGNIYSGQVP 70

Query: 64  FARPVGLRPPEGGVVIPNANGAIPTVNGNNGIPLGTGLAGTTSA----NGQNPQTQLGPD 119
           FA P+G   P+GG+ IPNANGAIPTVNG  GIPLGTGLAGT+ A    N  N Q QLGPD
Sbjct: 71  FATPIGFNTPQGGIPIPNANGAIPTVNGVTGIPLGTGLAGTSFAPNNNNQNNAQVQLGPD 130

Query: 120 GLGLGFGTITVIDDILTSNPELGSQAIGRAQGVYIASSVDGTSQMMTFTAMIEGGEYGDS 179
           GLGLGFGTITVIDDILTS PELGSQ +G+AQGVY+ASS DG+ QMM FTA+ EGGEYGDS
Sbjct: 131 GLGLGFGTITVIDDILTSQPELGSQMVGKAQGVYVASSADGSRQMMVFTALFEGGEYGDS 190

Query: 180 LNFYGLYKIGSTMSRLSVTGGTGKFKNARGFAEVRALIPPGQHVTDGAETLLRITVHLNY 239
           LNFYGLYKIGSTMSRLSV GGTGKFKNARGFAE+R LIPPGQ  TDGAETLLR++VHL Y
Sbjct: 191 LNFYGLYKIGSTMSRLSVIGGTGKFKNARGFAELRPLIPPGQIATDGAETLLRMSVHLKY 250

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297835480|ref|XP_002885622.1| disease resistance-responsive family protein [Arabidopsis lyrata subsp. lyrata] gi|297331462|gb|EFH61881.1| disease resistance-responsive family protein [Arabidopsis lyrata subsp. lyrata]

 Score =  335 bits (859), Expect = 1e-89,   Method: Compositional matrix adjust.
 Identities = 172/245 (70%), Positives = 199/245 (81%), Gaps = 8/245 (3%)

Query: 1   MFKRLSAFVFLGTMIALIQAVIITATG---EVPVLELYMHDILGGSSPTARPVTGLLGNI 57
           M  + S F+ L T+I    AV + A     E P+ ELYMHD+LGGSSPTARP+TGLLGNI
Sbjct: 1   MMIKQSPFLLL-TVILFTIAVFVAALDPAPEDPIFELYMHDLLGGSSPTARPITGLLGNI 59

Query: 58  YNGQVPFARPVGLRPPEGGVVIPNANGAIPTVNGNNGIPLGTGLAGTTSANGQNP---QT 114
           YNGQVPFA+ +G  PP+ G+ IPNANGA+PTVNG NG+PLGTGL+GT + +GQN    QT
Sbjct: 60  YNGQVPFAKQIGFTPPQNGIAIPNANGALPTVNGINGVPLGTGLSGT-AYSGQNLNGIQT 118

Query: 115 QLGPDGLGLGFGTITVIDDILTSNPELGSQAIGRAQGVYIASSVDGTSQMMTFTAMIEGG 174
           QLGPDGL LGFGTITVIDDILTS P+LGSQ +G+AQGVY+ASS DG++QMM FTAM EGG
Sbjct: 119 QLGPDGLSLGFGTITVIDDILTSGPDLGSQPLGKAQGVYVASSADGSTQMMAFTAMFEGG 178

Query: 175 EYGDSLNFYGLYKIGSTMSRLSVTGGTGKFKNARGFAEVRALIPPGQHVTDGAETLLRIT 234
           EY D+LNFYG+Y+IGS MS LSVTGGTG+FKNA GFAEVR LIP GQHV DGAE+LLRI 
Sbjct: 179 EYNDNLNFYGIYRIGSAMSHLSVTGGTGRFKNACGFAEVRPLIPSGQHVVDGAESLLRII 238

Query: 235 VHLNY 239
           VHL Y
Sbjct: 239 VHLKY 243

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15229564|ref|NP_189044.1| disease resistance-responsive, dirigent domain-containing protein [Arabidopsis thaliana] gi|30725346|gb|AAP37695.1| At3g24020 [Arabidopsis thaliana] gi|110736027|dbj|BAE99986.1| hypothetical protein [Arabidopsis thaliana] gi|332643324|gb|AEE76845.1| disease resistance-responsive, dirigent domain-containing protein [Arabidopsis thaliana]

 Score =  334 bits (857), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 171/245 (69%), Positives = 200/245 (81%), Gaps = 8/245 (3%)

Query: 1   MFKRLSAFVFLGTMIALIQAVIITATG---EVPVLELYMHDILGGSSPTARPVTGLLGNI 57
           M  + S F+ L T++  + AV + A     E P+ ELYMHD+LGGSSPTARP+TGLLGNI
Sbjct: 1   MMIKQSPFLLLTTILFTV-AVFVAALDPAPEDPIFELYMHDLLGGSSPTARPITGLLGNI 59

Query: 58  YNGQVPFARPVGLRPPEGGVVIPNANGAIPTVNGNNGIPLGTGLAGTTSANGQNP---QT 114
           YNGQVPFA+ +G  PPE G+ IPNANGA+PTVNG NG+PLGTGL+GT + +GQN    QT
Sbjct: 60  YNGQVPFAKQIGFTPPENGIAIPNANGALPTVNGINGVPLGTGLSGT-AYSGQNLNGIQT 118

Query: 115 QLGPDGLGLGFGTITVIDDILTSNPELGSQAIGRAQGVYIASSVDGTSQMMTFTAMIEGG 174
           QLGPDGL LGFGTITVIDDILTS P+LGSQ +G+AQGVY+ASS DG++QMM FTAM+EGG
Sbjct: 119 QLGPDGLSLGFGTITVIDDILTSGPDLGSQPLGKAQGVYVASSADGSTQMMAFTAMLEGG 178

Query: 175 EYGDSLNFYGLYKIGSTMSRLSVTGGTGKFKNARGFAEVRALIPPGQHVTDGAETLLRIT 234
           EY D+LNFYG+Y+IGS MS LSVTGGTG+FKNA GFAEVR LIP GQH  DGAE+LLRI 
Sbjct: 179 EYNDNLNFYGIYRIGSAMSHLSVTGGTGRFKNACGFAEVRPLIPSGQHEVDGAESLLRII 238

Query: 235 VHLNY 239
           VHL Y
Sbjct: 239 VHLKY 243

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297804978|ref|XP_002870373.1| disease resistance-responsive family protein [Arabidopsis lyrata subsp. lyrata] gi|297316209|gb|EFH46632.1| disease resistance-responsive family protein [Arabidopsis lyrata subsp. lyrata]

 Score =  332 bits (851), Expect = 8e-89,   Method: Compositional matrix adjust.
 Identities = 171/237 (72%), Positives = 193/237 (81%), Gaps = 9/237 (3%)

Query: 11  LGTMIALIQAVIITATG-----EVPVLELYMHDILGGSSPTARPVTGLLGNIYNGQVPFA 65
           L T I LI A+    T      E P+ ELYMHDILGGSSPTARP+TGLLGNIYNGQVPFA
Sbjct: 9   LSTSIFLIVALFTATTALDPAPEDPIFELYMHDILGGSSPTARPITGLLGNIYNGQVPFA 68

Query: 66  RPVGLRPPEGGVVIPNANGAIPTVNGNNGIPLGTGLAGTTSANGQNP---QTQLGPDGLG 122
           + +G  PP+ GV IPNANGA+PTVNG NGIPLGTGL+GT + +GQN    QTQLGPDGL 
Sbjct: 69  KQIGFVPPQNGVAIPNANGALPTVNGINGIPLGTGLSGT-AFSGQNLNGIQTQLGPDGLS 127

Query: 123 LGFGTITVIDDILTSNPELGSQAIGRAQGVYIASSVDGTSQMMTFTAMIEGGEYGDSLNF 182
           LGFGTITVIDDI+TS P+LGSQ +G+AQGVY+ASS DG++QMM FTAM+EGGEY D+LNF
Sbjct: 128 LGFGTITVIDDIITSGPDLGSQPLGKAQGVYVASSADGSTQMMAFTAMLEGGEYNDNLNF 187

Query: 183 YGLYKIGSTMSRLSVTGGTGKFKNARGFAEVRALIPPGQHVTDGAETLLRITVHLNY 239
           YG+Y+IGS MS LSVTGGTG+FKNA GFAEVR LIP GQH  DGAE LLRI VHL Y
Sbjct: 188 YGIYRIGSAMSHLSVTGGTGRFKNACGFAEVRPLIPAGQHFVDGAEMLLRIIVHLKY 244

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	239
TAIR|locus:2076156	243	AT3G24020 "AT3G24020" [Arabido	0.987	0.971	0.702	5.3e-88
TAIR|locus:2140862	244	AT4G13580 "AT4G13580" [Arabido	0.987	0.967	0.708	4.7e-87
TAIR|locus:1006589878	389	AT1G07730 "AT1G07730" [Arabido	0.874	0.537	0.481	8.1e-44
TAIR|locus:2065521	447	ESB1 "AT2G28670" [Arabidopsis	0.882	0.472	0.460	1.4e-41
TAIR|locus:2039737	322	AT2G39430 "AT2G39430" [Arabido	0.669	0.496	0.412	1.9e-26
TAIR|locus:2100661	306	AT3G55230 "AT3G55230" [Arabido	0.719	0.562	0.391	8.4e-26
TAIR|locus:2009769	189	AT1G65870 "AT1G65870" [Arabido	0.527	0.666	0.308	1.4e-17
TAIR|locus:2162361	185	AT5G42500 "AT5G42500" [Arabido	0.384	0.497	0.365	4.8e-17
TAIR|locus:2047002	187	AT2G21100 "AT2G21100" [Arabido	0.376	0.481	0.340	1.1e-14
TAIR|locus:2017689	193	AT1G22900 "AT1G22900" [Arabido	0.364	0.450	0.363	2.3e-14

TAIR|locus:2076156 AT3G24020 "AT3G24020" [Arabidopsis thaliana (taxid:3702)]

 Score = 879 (314.5 bits), Expect = 5.3e-88, P = 5.3e-88
 Identities = 172/245 (70%), Positives = 201/245 (82%)

Query:     1 MFKRLSAFVFLGTMIALIQAVIITATG---EVPVLELYMHDILGGSSPTARPVTGLLGNI 57
             M K+ S F+ L T++  + AV + A     E P+ ELYMHD+LGGSSPTARP+TGLLGNI
Sbjct:     2 MIKQ-SPFLLLTTILFTV-AVFVAALDPAPEDPIFELYMHDLLGGSSPTARPITGLLGNI 59

Query:    58 YNGQVPFARPVGLRPPEGGVVIPNANGAIPTVNGNNGIPLGTGLAGTTSANGQNP---QT 114
             YNGQVPFA+ +G  PPE G+ IPNANGA+PTVNG NG+PLGTGL+GT + +GQN    QT
Sbjct:    60 YNGQVPFAKQIGFTPPENGIAIPNANGALPTVNGINGVPLGTGLSGT-AYSGQNLNGIQT 118

Query:   115 QLGPDGLGLGFGTITVIDDILTSNPELGSQAIGRAQGVYIASSVDGTSQMMTFTAMIEGG 174
             QLGPDGL LGFGTITVIDDILTS P+LGSQ +G+AQGVY+ASS DG++QMM FTAM+EGG
Sbjct:   119 QLGPDGLSLGFGTITVIDDILTSGPDLGSQPLGKAQGVYVASSADGSTQMMAFTAMLEGG 178

Query:   175 EYGDSLNFYGLYKIGSTMSRLSVTGGTGKFKNARGFAEVRALIPPGQHVTDGAETLLRIT 234
             EY D+LNFYG+Y+IGS MS LSVTGGTG+FKNA GFAEVR LIP GQH  DGAE+LLRI 
Sbjct:   179 EYNDNLNFYGIYRIGSAMSHLSVTGGTGRFKNACGFAEVRPLIPSGQHEVDGAESLLRII 238

Query:   235 VHLNY 239
             VHL Y
Sbjct:   239 VHLKY 243

GO:0003674 "molecular_function" evidence=ND

GO:0009507 "chloroplast" evidence=ISM

TAIR|locus:2140862 AT4G13580 "AT4G13580" [Arabidopsis thaliana (taxid:3702)]

 Score = 870 (311.3 bits), Expect = 4.7e-87, P = 4.7e-87
 Identities = 175/247 (70%), Positives = 198/247 (80%)

Query:     1 MFKRLSAFVFLGTMIALIQAVIITATG-----EVPVLELYMHDILGGSSPTARPVTGLLG 55
             M K+ S F  L T I LI A+    T      E P+ ELYMHDILGGSSPTARP+TGLLG
Sbjct:     1 MMKQ-SPFSLL-TSIFLIAALFTATTALDPAPEDPIFELYMHDILGGSSPTARPITGLLG 58

Query:    56 NIYNGQVPFARPVGLRPPEGGVVIPNANGAIPTVNGNNGIPLGTGLAGTTSANGQNP--- 112
             NIYNGQVPFA+ +G  PP+ GV IPNANGA+PTVNG NGIPLGTGL+GT + +GQN    
Sbjct:    59 NIYNGQVPFAKQIGFVPPQNGVAIPNANGAMPTVNGINGIPLGTGLSGT-AFSGQNLNGI 117

Query:   113 QTQLGPDGLGLGFGTITVIDDILTSNPELGSQAIGRAQGVYIASSVDGTSQMMTFTAMIE 172
             QTQLGPDGL LGFGTITVIDDI+TS P+LGSQ +G+AQGVY+ASS DG++QMM FTAM+E
Sbjct:   118 QTQLGPDGLSLGFGTITVIDDIITSGPDLGSQPLGKAQGVYVASSADGSTQMMAFTAMLE 177

Query:   173 GGEYGDSLNFYGLYKIGSTMSRLSVTGGTGKFKNARGFAEVRALIPPGQHVTDGAETLLR 232
             GGEY D+LNFYG+Y+IGS MS LSVTGGTG+FKNA GFAEVR LIP GQH  DGAE LLR
Sbjct:   178 GGEYNDNLNFYGIYRIGSAMSHLSVTGGTGRFKNACGFAEVRPLIPAGQHFVDGAEMLLR 237

Query:   233 ITVHLNY 239
             I VHL Y
Sbjct:   238 IIVHLKY 244

GO:0003674 "molecular_function" evidence=ND

GO:0009507 "chloroplast" evidence=ISM

TAIR|locus:1006589878 AT1G07730 "AT1G07730" [Arabidopsis thaliana (taxid:3702)]

 Score = 462 (167.7 bits), Expect = 8.1e-44, P = 8.1e-44
 Identities = 115/239 (48%), Positives = 145/239 (60%)

Query:    27 GEVP--VLELYMHDILGGSSPTARPVTGLLGNI-YNGQVPFARPVGLR-PPEGGVVIPNA 82
             G VP   L  +MHDILGGS+PTAR VTG++ N   +GQ+PFA+P G   P   GV   N 
Sbjct:   155 GSVPDNTLVFFMHDILGGSNPTARAVTGVVANAALSGQIPFAKPNGANLPVSNGVPSDNN 214

Query:    83 NGAIPTVNGNNGIPLGTGLAGTTSA----NGQN-----PQTQLG--PDGLGLG---FGTI 128
             N  I  +N NN +PL  GL GTTS     NG N     P    G  P G  L    FGT+
Sbjct:   215 NNGI--LNNNN-VPLLVGLGGTTSNILQNNGNNMLNGLPVANGGQLPSGSSLQMLMFGTL 271

Query:   129 TVIDDILTSNPELGSQAIGRAQGVYIASSVDGTSQMMTFTAMIEGGEYGDSLNFYGLYKI 188
             TV+D+ LT   ELGS  +G+AQG Y+AS++DGTSQ M FTAM E G Y DS++F+G+++ 
Sbjct:   272 TVMDNELTEGHELGSGLLGKAQGFYVASALDGTSQTMAFTAMFESGGYEDSISFFGVHRT 331

Query:   189 GSTMSRLSVTGGTGKFKNARGFAEVRALI--------PPGQHVTDGAETLLRITVHLNY 239
              ++ S L V GGTGK+ NARGFA V+            P Q  TDG ET+L  TV+L+Y
Sbjct:   332 AASESHLGVMGGTGKYVNARGFAIVKTFTGSSGTQQQQPHQF-TDGLETVLECTVYLSY 389

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2065521 ESB1 "AT2G28670" [Arabidopsis thaliana (taxid:3702)]

 Score = 441 (160.3 bits), Expect = 1.4e-41, P = 1.4e-41
 Identities = 111/241 (46%), Positives = 141/241 (58%)

Query:    25 ATGEVPVLELYMHDILGGSSPTARPVTGLLGN-IYNGQVPFARPVGLR-PPEGGVVIPNA 82
             + G    L  +MHDILGGS+PTAR VTG++ N   +GQ+PFA+P G   P   GV   N 
Sbjct:   211 SAGPDNTLVFFMHDILGGSNPTARAVTGVVANPALSGQLPFAKPNGANLPVSNGVPSNNN 270

Query:    83 NGAIPTVNGNNGIPLGTGLAGTTSA------NGQN-----PQTQLG--PDGLGLG---FG 126
             N  I  VN NN +P   GL GTT+       NG N     P    G  P G  L    FG
Sbjct:   271 NNGI--VNNNN-VPFLVGLGGTTANILQNNNNGNNILNGFPVASGGQLPSGSALQMLMFG 327

Query:   127 TITVIDDILTSNPELGSQAIGRAQGVYIASSVDGTSQMMTFTAMIEGGEYGDSLNFYGLY 186
             T+TVIDD LT   ELGS  +G+AQG Y+AS++DGTSQ M FTAM E G Y DS++F+G+ 
Sbjct:   328 TMTVIDDELTEGHELGSGLLGKAQGYYVASAIDGTSQTMAFTAMFESGGYEDSISFFGVL 387

Query:   187 KIGSTMSRLSVTGGTGKFKNARGFAEVRALI--------PPGQHVTDGAETLLRITVHLN 238
             +   + S + V GGTGK+ NARGFA ++            P Q  TDG ET++  TV+L+
Sbjct:   388 RTAVSESHIGVMGGTGKYVNARGFAILKTFTGSSGTQQNQPHQF-TDGLETVVECTVYLS 446

Query:   239 Y 239
             Y
Sbjct:   447 Y 447

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0010345 "suberin biosynthetic process" evidence=IMP

TAIR|locus:2039737 AT2G39430 "AT2G39430" [Arabidopsis thaliana (taxid:3702)]

 Score = 298 (110.0 bits), Expect = 1.9e-26, P = 1.9e-26
 Identities = 73/177 (41%), Positives = 105/177 (59%)

Query:    69 GLRPPEGGVVIPNANGAIPTVNGNNGIPLGTGLAGTTSANGQNPQTQLGPDGLGLGFGTI 128
             GL   +   VI N NG     N N+ +   + L   T+ N   P   L      L FGTI
Sbjct:   155 GLGGAQTSTVIQNTNG-----NSNDALSANS-LPFVTAGN-LPPGAALQH----LMFGTI 203

Query:   129 TVIDDILTSNPELGSQAIGRAQGVYIASSVDGTSQMMTFTAMIEGGE-----YGDSLNFY 183
             TV+DD LT + ELGS  IGRAQG Y+ASS+DGTSQ ++ T ++ G         D+++F+
Sbjct:   204 TVVDDELTESHELGSAVIGRAQGFYLASSLDGTSQTLSLTVLLHGEHDQHDTLDDAISFF 263

Query:   184 GLYKIGSTMSRLSVTGGTGKFKNARGFAEVRALI-PPGQHVTDGAETLLRITVHLNY 239
             G+++  S  S+++V GGTGKF++A+G+A V  L     QH+TDG +T+L  +V+L Y
Sbjct:   264 GVHRTASHASQIAVIGGTGKFEHAKGYAIVETLHNQDNQHITDGQDTILHFSVYLTY 320

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM

GO:0009807 "lignan biosynthetic process" evidence=ISS

GO:0048765 "root hair cell differentiation" evidence=RCA

TAIR|locus:2100661 AT3G55230 "AT3G55230" [Arabidopsis thaliana (taxid:3702)]

 Score = 292 (107.8 bits), Expect = 8.4e-26, P = 8.4e-26
 Identities = 76/194 (39%), Positives = 110/194 (56%)

Query:    54 LGNIYNGQVPFARPV--GLRPPEGGVVIPNANGAIPTVNGNNGIPLGTGLAGTTSANGQN 111
             + N+ N   P   P+  GL   +   VI N+NG       +N +P  T         GQ 
Sbjct:   124 INNLIN---PNTAPLLTGLSGSQANTVIQNSNGNSQGSLSSNNLPFVT--------TGQL 172

Query:   112 PQTQLGPDGLGLGFGTITVIDDILTSNPELGSQAIGRAQGVYIASSVDGTSQMMTFTAMI 171
             P          L FG+ITV+DD LT   ELGS  IGRAQG Y+ASS+DGTSQ ++ T ++
Sbjct:   173 PPIAALQQ---LMFGSITVVDDELTEGHELGSAIIGRAQGFYLASSLDGTSQTLSLTVLL 229

Query:   172 -EGGEYGDSLN----FYGLYKIGSTMSRLSVTGGTGKFKNARGFAEVRALI-PPGQHVTD 225
              E  ++ D+L+    F+G+++  S  S ++V GGTG+F++A+G+A V  L     QHVTD
Sbjct:   230 HEDHDHHDTLDDAISFFGVHRTASHASHIAVVGGTGRFEHAKGYAVVETLHNQEDQHVTD 289

Query:   226 GAETLLRITVHLNY 239
             G +T+L  +V+L Y
Sbjct:   290 GHDTILHFSVYLTY 303

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM

GO:0006952 "defense response" evidence=ISS

TAIR|locus:2009769 AT1G65870 "AT1G65870" [Arabidopsis thaliana (taxid:3702)]

 Score = 179 (68.1 bits), Expect = 1.4e-17, Sum P(2) = 1.4e-17
 Identities = 42/136 (30%), Positives = 73/136 (53%)

Query:   108 NGQNP---QTQLGP--DGLGLGFGTITVIDDILTSNPELGSQAIGRAQGVYIASSVDGTS 162
             +G  P   Q   GP  +    GFG + V+DD LT  PE+ S+ +GRAQG+Y ++  +   
Sbjct:    56 SGDKPTSVQVANGPTTNSSATGFGLVAVVDDKLTVGPEITSEEVGRAQGMYASADQNKLG 115

Query:   163 QMMTFTAMIEGGEYGDS-LNFYGLYKIGSTMSRLSVTGGTGKFKNARGFAEVRALIPPGQ 221
              +M F  +   G++ DS +  YG   + S +  + + GGTG F+  RG+A  + L+    
Sbjct:   116 LLMAFNLVFTKGKFSDSTVAMYGRNPVLSKVREMPIIGGTGAFRFGRGYALAKTLV---F 172

Query:   222 HVTDGAETLLRITVHL 237
             ++T G + ++   V++
Sbjct:   173 NITSG-DAVVEYNVYI 187

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM

GO:0006952 "defense response" evidence=ISS

GO:0009807 "lignan biosynthetic process" evidence=ISS

GO:0005618 "cell wall" evidence=IDA

TAIR|locus:2162361 AT5G42500 "AT5G42500" [Arabidopsis thaliana (taxid:3702)]

 Score = 171 (65.3 bits), Expect = 4.8e-17, Sum P(2) = 4.8e-17
 Identities = 34/93 (36%), Positives = 54/93 (58%)

Query:   123 LGFGTITVIDDILTSNPELGSQAIGRAQGVYIASSVDGTSQMMTFTAMIEGGEY-GDSLN 181
             + FG I + DD LT  P+  S+ +GRAQG+Y  +++   S  M F      GE+ G ++ 
Sbjct:    74 VNFGVIMIADDPLTEGPDPSSKEVGRAQGMYALTAMKNISFTMVFNLAFTAGEFNGSTVA 133

Query:   182 FYGLYKIGSTMSRLSVTGGTGKFKNARGFAEVR 214
              YG  +I S +  + + GGTG F+ ARG+A+ +
Sbjct:   134 MYGRNEIFSKVREMPIIGGTGAFRFARGYAQAK 166

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM

GO:0006952 "defense response" evidence=ISS

TAIR|locus:2047002 AT2G21100 "AT2G21100" [Arabidopsis thaliana (taxid:3702)]

 Score = 145 (56.1 bits), Expect = 1.1e-14, Sum P(2) = 1.1e-14
 Identities = 31/91 (34%), Positives = 50/91 (54%)

Query:   125 FGTITVIDDILTSNPELGSQAIGRAQGVYIASSVDGTSQMMTFTAMIEGGEYGDS-LNFY 183
             FG + ++DD LT   +  S+ +GRAQG+Y +S  +    +M  +   E G Y DS ++  
Sbjct:    76 FGAVFMVDDALTETADPKSKLVGRAQGLYGSSCKEEVGLIMAMSFCFEDGPYKDSTISMI 135

Query:   184 GLYKIGSTMSRLSVTGGTGKFKNARGFAEVR 214
             G     + +  + + GGTG F+ ARG+A  R
Sbjct:   136 GKNSAMNPIREMPIVGGTGMFRMARGYAIAR 166

GO:0003674 "molecular_function" evidence=ND

GO:0006952 "defense response" evidence=ISS

GO:0009807 "lignan biosynthetic process" evidence=ISS

TAIR|locus:2017689 AT1G22900 "AT1G22900" [Arabidopsis thaliana (taxid:3702)]

 Score = 149 (57.5 bits), Expect = 2.3e-14, Sum P(2) = 2.3e-14
 Identities = 32/88 (36%), Positives = 48/88 (54%)

Query:   125 FGTITVIDDILTSNPELGSQAIGRAQGVYIASSVDGTSQMMTFTAMIEGGEY-GDSLNFY 183
             FG + ++D  +T  PEL S+ +GRAQG+Y ++ +      M F  +   GE+ G +   Y
Sbjct:    84 FGAVLIVDAPVTEGPELSSKEVGRAQGLYASTDMKTFGFTMVFNFVFTEGEFNGSTAALY 143

Query:   184 GLYKIGSTMSRLSVTGGTGKFKNARGFA 211
             G   I      L + GGTG F+ ARG+A
Sbjct:   144 GRNPILLEERELPIIGGTGDFRFARGYA 171

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM

GO:0006952 "defense response" evidence=ISS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: GSVIVG00020441001 SubName- Full=Chromosome chr5 scaffold_2, whole genome shotgun sequence; (249 aa) (Vitis vinifera)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	239
pfam03018	144	pfam03018, Dirigent, Dirigent-like protein	7e-32

>gnl|CDD|217321 pfam03018, Dirigent, Dirigent-like protein

 Score =  113 bits (285), Expect = 7e-32
 Identities = 51/135 (37%), Positives = 71/135 (52%), Gaps = 9/135 (6%)

Query: 109 GQNP---QTQLGPDGLGLGFGTITVIDDILTSNPELGSQAIGRAQGVYIASSVDGTSQMM 165
           G N    Q    P     GFGT+ VIDD LT  P+L S+ +GRAQG Y+ +S DG S +M
Sbjct: 15  GPNATAVQVASPPGTNSSGFGTVVVIDDPLTEGPDLNSKLVGRAQGFYVYASQDGLSLLM 74

Query: 166 TFTAMIEGGEY-GDSLNFYGLYKIGSTMSRLSVTGGTGKFKNARGFAEVRALIPPGQHVT 224
            FT +   GEY G +L   G   +   +  LSV GGTGKF+ ARG+A  R          
Sbjct: 75  AFTFVFTSGEYNGSTLAVMGRNPVFEEVRELSVVGGTGKFRMARGYALARTY-----FSL 129

Query: 225 DGAETLLRITVHLNY 239
              + ++ + V++ +
Sbjct: 130 TSGDAIVELNVYVKH 144

This family contains a number of proteins which are induced during disease response in plants. Members of this family are involved in lignification. Length = 144

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	239
PF03018	144	Dirigent: Dirigent-like protein; InterPro: IPR0042	100.0
PF06351	176	Allene_ox_cyc: Allene oxide cyclase; InterPro: IPR	97.28
PLN02343	229	allene oxide cyclase	96.03
PF11528	134	DUF3224: Protein of unknown function (DUF3224); In	84.54

>PF03018 Dirigent: Dirigent-like protein; InterPro: IPR004265 This family contains a number of proteins which are induced during disease response in plants

Probab=100.00  E-value=2.4e-46  Score=310.69  Aligned_cols=143  Identities=41%  Similarity=0.690  Sum_probs=130.6

Q ss_pred             CcceEEEEEeeccCCCCCcceeeeccccccccCCccccCCCCCCCCCCceeccCCCCCcccccCCCCCCccccccccccc
Q 041927           28 EVPVLELYMHDILGGSSPTARPVTGLLGNIYNGQVPFARPVGLRPPEGGVVIPNANGAIPTVNGNNGIPLGTGLAGTTSA  107 (239)
Q Consensus        28 ~~~~l~fymHDil~Gs~pta~~vtg~~~~~~~~~~pf~~p~~~~~~~~g~pl~~~~~~~~~~~~~~~~p~~tgl~g~~~~  107 (239)
                      |+++|+|||||+++|+|||+.+|+...                                                     
T Consensus         1 ~~t~l~fY~H~~~~g~n~t~~~v~~~~-----------------------------------------------------   27 (144)
T PF03018_consen    1 KETHLHFYMHDIVSGPNPTAVVVAEPP-----------------------------------------------------   27 (144)
T ss_pred             CceEEEEEeeecCCCCCCCEEEeccCC-----------------------------------------------------
Confidence            568999999999999999999996531                                                     


Q ss_pred             CCCCCCcccCCCCCCCCCeeEEEEccccccCCCCCCcceeeeEEEEEEecCCCceeeEEEEEEEccCCcCC-eEEEeecc
Q 041927          108 NGQNPQTQLGPDGLGLGFGTITVIDDILTSNPELGSQAIGRAQGVYIASSVDGTSQMMTFTAMIEGGEYGD-SLNFYGLY  186 (239)
Q Consensus       108 ~~~~~~~~~gp~~s~~~FGtv~ViDd~LTeGp~~~Sk~VGRAQG~yv~ss~dg~s~~~~~t~vF~~g~y~G-SL~~~G~~  186 (239)
                                 .....+||+++|+||+|||||+++||+||||||+|+.+++++.+|+++++++|++++|+| ||+++|++
T Consensus        28 -----------~~~~~~FG~~~V~D~~lt~gp~~~S~~VGraqG~~~~~s~~~~~~~~~~~~vF~~g~~~GStl~v~G~~   96 (144)
T PF03018_consen   28 -----------GPSSSGFGTVVVFDDPLTEGPDPDSKLVGRAQGFYVSASLDGSSWFMSFTLVFEDGEYNGSTLSVMGRD   96 (144)
T ss_pred             -----------CCCCCCCcEEEEEeeceEcCCCCCCccceEEEEEEEeecccCccEEEEEEEEEEecccCCCeEEEeCCC
Confidence                       011237999999999999999999999999999999999999999999999999999998 69999999


Q ss_pred             CCCCcceeeeEeeccCcccCceeEEEEEEecCCCccccCCCceEEEEEEEEeC
Q 041927          187 KIGSTMSRLSVTGGTGKFKNARGFAEVRALIPPGQHVTDGAETLLRITVHLNY  239 (239)
Q Consensus       187 ~~~~~~rElaVVGGTG~Fr~ArGya~~~t~~~~~q~~tdg~~~ile~~Vyl~~  239 (239)
                      +..+++||||||||||+|||||||++++++.     +.++.+.++||+|||+|
T Consensus        97 ~~~~~~~e~~VVGGTG~Fr~ArG~~~~~~~~-----~~~~~~~v~e~~v~~~h  144 (144)
T PF03018_consen   97 PFFEPVRELAVVGGTGEFRMARGYAKLRTVF-----DSSGGNAVLELNVHLFH  144 (144)
T ss_pred             cccCcccEEeEecCCCeEcceEEEEEEEEEe-----ecCCCCEEEEEEEEEEC
Confidence            9999999999999999999999999999982     35678999999999998

>PF06351 Allene_ox_cyc: Allene oxide cyclase; InterPro: IPR009410 This family consists of several plant specific allene oxide cyclase proteins (5

Probab=97.28  E-value=0.0046  Score=53.43  Aligned_cols=101  Identities=20%  Similarity=0.288  Sum_probs=71.9

Q ss_pred             CCCeeEEEEccccccCCCCCCcceeeeEEEEEEecC----CCceeeEEEEEEEccCCcCCeEEEeeccCCCCcceeeeEe
Q 041927          123 LGFGTITVIDDILTSNPELGSQAIGRAQGVYIASSV----DGTSQMMTFTAMIEGGEYGDSLNFYGLYKIGSTMSRLSVT  198 (239)
Q Consensus       123 ~~FGtv~ViDd~LTeGp~~~Sk~VGRAQG~yv~ss~----dg~s~~~~~t~vF~~g~y~GSL~~~G~~~~~~~~rElaVV  198 (239)
                      ...|..+-+.|+|..|.-  .+.+|--+|+.+.-..    .|-.+--.+++.|-+   -|.|+++|..-.- ...-++|.
T Consensus        34 nslGDlvpFsNklY~g~l--~~rlGitaG~Cvliq~~p~k~GdryEaiySfyfGd---yGhISvqGpy~t~-eDtyLAVT  107 (176)
T PF06351_consen   34 NSLGDLVPFSNKLYDGDL--QKRLGITAGICVLIQHVPEKKGDRYEAIYSFYFGD---YGHISVQGPYLTY-EDTYLAVT  107 (176)
T ss_dssp             S-TT-EEEEEEEEEETTS--S-EEEEEEEEEEEEEEECCCTEEEEEEEEEEE-GG---GEEEEEEEEEETT-S-EEEEEE
T ss_pred             hhcccccccccccccchh--hhhhcccceEEEEEEeccccCCceEEEEEEEEecc---cceEEEecccccc-cceeEEEe
Confidence            458999999999999864  5889999999887653    233334445666644   3789999998765 55679999


Q ss_pred             eccCcccCceeEEEEEEecCCCccccCCCceEEEEEEEEe
Q 041927          199 GGTGKFKNARGFAEVRALIPPGQHVTDGAETLLRITVHLN  238 (239)
Q Consensus       199 GGTG~Fr~ArGya~~~t~~~~~q~~tdg~~~ile~~Vyl~  238 (239)
                      ||||-|+.|+|-++++.+.+.         .-+-|+.||+
T Consensus       108 GGtGiF~g~~GqVkL~qivfP---------fKlfYTFylk  138 (176)
T PF06351_consen  108 GGTGIFEGVYGQVKLHQIVFP---------FKLFYTFYLK  138 (176)
T ss_dssp             EEEETTTT-EEEEEEEEEETT---------TEEEEEEEEE
T ss_pred             ccCceeecceEEEEEEEeecc---------eEEEEEEEec
Confidence            999999999999999987431         2455666664

3.99.6 from EC). The allene oxide cyclase (AOC)-catalysed step in jasmonate (JA) biosynthesis is important in the wound response of tomato [].; GO: 0016853 isomerase activity, 0009507 chloroplast; PDB: 2GIN_A 2DIO_B 2BRJ_B 2Q4I_B 1Z8K_A 1ZVC_A.

>PLN02343 allene oxide cyclase

Probab=96.03  E-value=0.057  Score=48.44  Aligned_cols=89  Identities=18%  Similarity=0.347  Sum_probs=70.1

Q ss_pred             CCCeeEEEEccccccCCCCCCcceeeeEEEEEEecC----CCceeeEEEEEEEccCCcCCeEEEeeccCCCCcceeeeEe
Q 041927          123 LGFGTITVIDDILTSNPELGSQAIGRAQGVYIASSV----DGTSQMMTFTAMIEGGEYGDSLNFYGLYKIGSTMSRLSVT  198 (239)
Q Consensus       123 ~~FGtv~ViDd~LTeGp~~~Sk~VGRAQG~yv~ss~----dg~s~~~~~t~vF~~g~y~GSL~~~G~~~~~~~~rElaVV  198 (239)
                      ...|+++-+.+.|..|.  --+.+|--.|+.+.-..    .|-.+=-.+++.|-+  | |-|+++|..-.- +..-++|.
T Consensus        85 ~sLGDlVPFsNKlY~g~--L~kRlGiTaG~Cvliq~~pek~gDryEa~ySfyfGD--y-GHisvqGpylty-eDt~LaiT  158 (229)
T PLN02343         85 NALGDLVPFTNKLYTGD--LKKRLGITAGLCVLIQHVPEKKGDRYEAIYSFYFGD--Y-GHISVQGPYLTY-EDTYLAIT  158 (229)
T ss_pred             ccccceeccccccccch--hhhhhcccceeEEEEEeccccCCceeEEEEEEEecC--c-ceeEEecccccc-ccceEEee
Confidence            56899999999999885  35789999999887665    233445556677744  3 679999998764 34679999


Q ss_pred             eccCcccCceeEEEEEEec
Q 041927          199 GGTGKFKNARGFAEVRALI  217 (239)
Q Consensus       199 GGTG~Fr~ArGya~~~t~~  217 (239)
                      ||+|-|+.|+|-+++..+.
T Consensus       159 GGsGiFega~GqvkL~qiv  177 (229)
T PLN02343        159 GGSGIFEGAYGQVKLHQIV  177 (229)
T ss_pred             cCcceeecceeEEEEeeee
Confidence            9999999999999988875

>PF11528 DUF3224: Protein of unknown function (DUF3224); InterPro: IPR021607 This bacterial family of proteins has no known function

Probab=84.54  E-value=14  Score=30.86  Aligned_cols=75  Identities=21%  Similarity=0.368  Sum_probs=49.1

Q ss_pred             CCcceeeeEEEEEEecC-CCceeeEEEEEEEc-cCCcCCe--EEEeeccCCCCcceeeeEe--eccCcccCceeEEEEEE
Q 041927          142 GSQAIGRAQGVYIASSV-DGTSQMMTFTAMIE-GGEYGDS--LNFYGLYKIGSTMSRLSVT--GGTGKFKNARGFAEVRA  215 (239)
Q Consensus       142 ~Sk~VGRAQG~yv~ss~-dg~s~~~~~t~vF~-~g~y~GS--L~~~G~~~~~~~~rElaVV--GGTG~Fr~ArGya~~~t  215 (239)
                      .-.+.|++++-|+.+-. ++...++++.-+=- -+..+||  |+-.|.........+|-||  -|||++...+|-..++.
T Consensus        39 ~G~l~Gts~~~~L~~y~~~g~a~yva~E~~~Gtl~Gr~GsFvl~h~G~~~~g~~~~~~~VVPgSGTGeL~Gl~Gsg~~~~  118 (134)
T PF11528_consen   39 SGDLEGTSTGEYLMAYDPDGSAGYVAFERFTGTLDGRSGSFVLQHSGTFDAGTASSSFTVVPGSGTGELAGLSGSGTITI  118 (134)
T ss_dssp             -TTEEEEEEEEEEEEEECTTEEEEEEEEEEEEEETTEEEEEEEEEEEEEETTEEEEEEEE-TT--EETTTTEEEEEEEEE
T ss_pred             EeEEEEEEEEEEEEEEcCCCcEEEEEEEEEEEEECCceEEEEEEEEEEEcCCcceEEEEEeCCCCchhhcCCEEEEEEEE
Confidence            34577888888887754 46666665543211 1223577  5666776655566789999  99999999999999887


Q ss_pred             e
Q 041927          216 L  216 (239)
Q Consensus       216 ~  216 (239)
                      .
T Consensus       119 ~  119 (134)
T PF11528_consen  119 D  119 (134)
T ss_dssp             E
T ss_pred             C
Confidence            5

; PDB: 2OOJ_B 2Q03_B.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	239
2brj_A	188	Arabidopsis thaliana genomic DNA, chromosome 3, TA	6e-04

>2brj_A Arabidopsis thaliana genomic DNA, chromosome 3, TAC clone\:K13N2; cyclase, jasmonate synthesis, allene oxide cyclase, beta barrel; 1.5A {Arabidopsis thaliana} SCOP: b.159.1.1 PDB: 2dio_A* 2gin_A 1z8k_A* 2q4i_A 1zvc_A Length = 188

 Score = 38.6 bits (89), Expect = 6e-04
 Identities = 27/115 (23%), Positives = 47/115 (40%), Gaps = 8/115 (6%)

Query: 111 NPQTQLGPDGLGLGFGTITVIDDILTSNPELGSQA----IGRAQGVYIASSVDGTSQMMT 166
           N   +  P  L   F  +  + D++    +L +      +G   G+ +        +   
Sbjct: 25  NELDRHSPKILKNAFSLMFGLGDLVPFTNKLYTGDLKKRVGITAGLCVVIEHVPEKKGER 84

Query: 167 FTAM--IEGGEYGDSLNFYGLYKIGSTMSRLSVTGGTGKFKNARGFAEVRALIPP 219
           F A      G+YG  L+  G Y      S L++TGG G F+ A G  +++ L+ P
Sbjct: 85  FEATYSFYFGDYG-HLSVQGPYLTYED-SFLAITGGAGIFEGAYGQVKLQQLVYP 137

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	239
2brj_A	188	Arabidopsis thaliana genomic DNA, chromosome 3, TA	98.66
4h6b_A	195	Allene oxide cyclase; B-barrel, oxylipins, fatty a	98.32

>2brj_A Arabidopsis thaliana genomic DNA, chromosome 3, TAC clone\:K13N2; cyclase, jasmonate synthesis, allene oxide cyclase, beta barrel; 1.5A {Arabidopsis thaliana} SCOP: b.159.1.1 PDB: 2dio_A* 2gin_A 1z8k_A* 2q4i_A 1zvc_A

Probab=98.66  E-value=2e-07  Score=79.74  Aligned_cols=101  Identities=24%  Similarity=0.334  Sum_probs=80.7

Q ss_pred             CCCeeEEEEccccccCCCCCCcceeeeEEEEEEecC----CCceeeEEEEEEEccCCcCCeEEEeeccCCCCcceeeeEe
Q 041927          123 LGFGTITVIDDILTSNPELGSQAIGRAQGVYIASSV----DGTSQMMTFTAMIEGGEYGDSLNFYGLYKIGSTMSRLSVT  198 (239)
Q Consensus       123 ~~FGtv~ViDd~LTeGp~~~Sk~VGRAQG~yv~ss~----dg~s~~~~~t~vF~~g~y~GSL~~~G~~~~~~~~rElaVV  198 (239)
                      ..-|..+.++++|.++..  -+.||.-+|+.+....    .+..+.-.+++.|-+   .|.|+++|..-.- +...+||.
T Consensus        43 ~slGDlvpFsNkLydg~l--~~rvG~taG~Cv~~~~~p~~~gdryE~tyS~yfgd---~GhISvQGpy~t~-~Dt~LAIT  116 (188)
T 2brj_A           43 FGLGDLVPFTNKLYTGDL--KKRVGITAGLCVVIEHVPEKKGERFEATYSFYFGD---YGHLSVQGPYLTY-EDSFLAIT  116 (188)
T ss_dssp             SCTTCEEEECCEEEETTS--SCEEEEEEEEEEEEEEEGGGTEEEEEEEEEEECGG---GEEEEEEEEEETT-BCEEEEEE
T ss_pred             cCcccEEeeccccccccc--ceeccccceEEEEEEecCCCCCcEEEEEEEEEeCC---CceEEEecccccc-ccceeeEe
Confidence            458999999999997653  4789999999988863    344566666777755   3789999996433 45789999


Q ss_pred             eccCcccCceeEEEEEEecCCCccccCCCceEEEEEEEEe
Q 041927          199 GGTGKFKNARGFAEVRALIPPGQHVTDGAETLLRITVHLN  238 (239)
Q Consensus       199 GGTG~Fr~ArGya~~~t~~~~~q~~tdg~~~ile~~Vyl~  238 (239)
                      ||||.|+.|+|.+.++.+.+         -.-++|++||+
T Consensus       117 GGTGif~gA~G~Vkl~~i~~---------P~k~~yTf~L~  147 (188)
T 2brj_A          117 GGAGIFEGAYGQVKLQQLVY---------PTKLFYTFYLK  147 (188)
T ss_dssp             EEEETTTTCEEEEEEEEEET---------TTEEEEEEEEE
T ss_pred             cCcceEcceEEEEEEEeecc---------CceEEEEEEEe
Confidence            99999999999999999853         13589999986

>4h6b_A Allene oxide cyclase; B-barrel, oxylipins, fatty acid, metabolites, allene-oxide C activity, isomerase; HET: 10X 10Y; 1.35A {Physcomitrella patens} PDB: 4h6c_A 4h6a_A* 4h69_A*

Probab=98.32  E-value=7.3e-06  Score=70.40  Aligned_cols=101  Identities=21%  Similarity=0.287  Sum_probs=77.2

Q ss_pred             CCCeeEEEEccccccCCCCCCcceeeeEEEEEEecC----CCceeeEEEEEEEccCCcCCeEEEeeccCCCCcceeeeEe
Q 041927          123 LGFGTITVIDDILTSNPELGSQAIGRAQGVYIASSV----DGTSQMMTFTAMIEGGEYGDSLNFYGLYKIGSTMSRLSVT  198 (239)
Q Consensus       123 ~~FGtv~ViDd~LTeGp~~~Sk~VGRAQG~yv~ss~----dg~s~~~~~t~vF~~g~y~GSL~~~G~~~~~~~~rElaVV  198 (239)
                      ...|+++.++++|.++..  -+.||...|+.+....    .|..+--.+++.|.+   -|+|+++|..-. -...-+||+
T Consensus        51 ~slGDLvpFsnkLydg~l--~~RiGitaG~Cv~i~~~~~k~GdryEci~Tf~fGD---~GhIsvqGpy~t-~eDs~lAIT  124 (195)
T 4h6b_A           51 NSLGDLVPFSNKIYDGSL--KTRLGITAGLCTLISHSDQKNGDRYEALYSFYFGD---YGHISVQGPYIT-YEDSYLAIT  124 (195)
T ss_dssp             CCTTCEEEECCEEEETTS--CCEEEEEEEEEEEEEEETTTTEEEEEEEEEEECGG---GCEEEEEEEEET-TBCEEEEEE
T ss_pred             cccccccccccccccccc--cccccccccEEEEEeecCCCCCceEEEEEEEEecC---CceEEEecceec-cCceeEEEe
Confidence            459999999999999876  5789999999987752    233333455676754   489999999855 345679999


Q ss_pred             eccCcccCceeEEEEEEecCCCccccCCCceEEEEEEEEe
Q 041927          199 GGTGKFKNARGFAEVRALIPPGQHVTDGAETLLRITVHLN  238 (239)
Q Consensus       199 GGTG~Fr~ArGya~~~t~~~~~q~~tdg~~~ile~~Vyl~  238 (239)
                      ||||.|+.|+|-+++..+.+.         .-+-|+.||+
T Consensus       125 GGTGiF~Ga~GqVkl~qiv~p---------fklfytfyl~  155 (195)
T 4h6b_A          125 GGSGIFAGCYGQAKLHQIIFP---------FKLFYTFYLQ  155 (195)
T ss_dssp             EESGGGTTCEEEEEEEEEETT---------TEEEEEEEEE
T ss_pred             cCcceEcccEEEEEEeEeeee---------eeEEEEEEec
Confidence            999999999999999887531         2456666664

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	239
d2brja1	174	Allene oxide cyclase, AOC {Thale cress (Arabidopsi	97.21
d2ooja1	133	Hypothetical protein SO1590 {Shewanella oneidensis	88.4

>d2brja1 b.159.1.1 (A:15-188) Allene oxide cyclase, AOC {Thale cress (Arabidopsis thaliana), chloroplast AOC2 [TaxId: 3702]}

class: All beta proteins
fold: AOC barrel-like
superfamily: Allene oxide cyclase-like
family: Allene oxide cyclase-like
domain: Allene oxide cyclase, AOC
species: Thale cress (Arabidopsis thaliana), chloroplast AOC2 [TaxId: 3702]

Probab=97.21  E-value=0.0016  Score=52.98  Aligned_cols=101  Identities=25%  Similarity=0.370  Sum_probs=76.3

Q ss_pred             CCCeeEEEEccccccCCCCCCcceeeeEEEEEEecC----CCceeeEEEEEEEccCCcCCeEEEeeccCCCCcceeeeEe
Q 041927          123 LGFGTITVIDDILTSNPELGSQAIGRAQGVYIASSV----DGTSQMMTFTAMIEGGEYGDSLNFYGLYKIGSTMSRLSVT  198 (239)
Q Consensus       123 ~~FGtv~ViDd~LTeGp~~~Sk~VGRAQG~yv~ss~----dg~s~~~~~t~vF~~g~y~GSL~~~G~~~~~~~~rElaVV  198 (239)
                      ...|..+-+.|+|..|.  ..+.+|--.|+.+.-+.    .+-.+--.+++.|-+  | |-|++||....-+ ..-++|+
T Consensus        29 n~lGDlVpFsNkly~g~--l~kRlGitaG~C~liq~~pek~gdryEa~ySfyfGD--y-GhISvqGpyltye-DtylaiT  102 (174)
T d2brja1          29 FGLGDLVPFTNKLYTGD--LKKRVGITAGLCVVIEHVPEKKGERFEATYSFYFGD--Y-GHLSVQGPYLTYE-DSFLAIT  102 (174)
T ss_dssp             SCTTCEEEECCEEEETT--SSCEEEEEEEEEEEEEEEGGGTEEEEEEEEEEECGG--G-EEEEEEEEEETTB-CEEEEEE
T ss_pred             ccccccccccchhcccc--hhhhccceeeEEEEEEecCCcCcceeEEEEEEEecC--c-ccEEEeccccccc-cceeeee
Confidence            45899999999999764  35789999999887764    222344455666644  2 6799999998654 4689999


Q ss_pred             eccCcccCceeEEEEEEecCCCccccCCCceEEEEEEEEe
Q 041927          199 GGTGKFKNARGFAEVRALIPPGQHVTDGAETLLRITVHLN  238 (239)
Q Consensus       199 GGTG~Fr~ArGya~~~t~~~~~q~~tdg~~~ile~~Vyl~  238 (239)
                      ||||-|+.|+|-+++..+.+     .    .-+-|+-||+
T Consensus       103 GGsGiFeGa~GqVkL~qivf-----P----fKlfYTFyLk  133 (174)
T d2brja1         103 GGAGIFEGAYGQVKLQQLVY-----P----TKLFYTFYLK  133 (174)
T ss_dssp             EEEETTTTCEEEEEEEEEET-----T----TEEEEEEEEE
T ss_pred             cccceeecceeEEEEeeeee-----e----eeEEEEEEEc
Confidence            99999999999999988753     1    3566666665

>d2ooja1 b.159.2.1 (A:2-134) Hypothetical protein SO1590 {Shewanella oneidensis [TaxId: 70863]}

class: All beta proteins
fold: AOC barrel-like
superfamily: SO1590-like
family: SO1590-like
domain: Hypothetical protein SO1590
species: Shewanella oneidensis [TaxId: 70863]

Probab=88.40  E-value=4.2  Score=31.08  Aligned_cols=73  Identities=21%  Similarity=0.358  Sum_probs=51.6

Q ss_pred             CCcceeeeEEEEEEec--CCCceeeEEEEEEEcc--CCcCCe--EEEeeccCCCCcceeeeEe--eccCcccCceeEEEE
Q 041927          142 GSQAIGRAQGVYIASS--VDGTSQMMTFTAMIEG--GEYGDS--LNFYGLYKIGSTMSRLSVT--GGTGKFKNARGFAEV  213 (239)
Q Consensus       142 ~Sk~VGRAQG~yv~ss--~dg~s~~~~~t~vF~~--g~y~GS--L~~~G~~~~~~~~rElaVV--GGTG~Fr~ArGya~~  213 (239)
                      +-.+-|+.++.|+.+-  .++...++++.. |+.  +..+||  |+-.|.........+|-||  -|||++...+|...+
T Consensus        38 ~Gdl~G~s~~e~l~~y~~~~g~A~yvg~E~-f~G~l~Gr~Gtfvlqh~G~~~~g~~~~~~~IVpgSgTGeL~Gl~G~~~i  116 (133)
T d2ooja1          38 YGELEARSQGEMLSAMTAVKGSAGYVAIEQ-VVGKLCGRQGSFVLQHFGIMTDGQNRLHLEVVPHSGAGELTGLYGTMAI  116 (133)
T ss_dssp             CSSEEEEEEEEEEEEECSSTTCEEEEEEEE-EEEEETTEEEEEEEEEEEEECC--CEEEEEECTTCCEETTTTEEEEEEE
T ss_pred             eeeeeeEEEEEEEEEecCCCCceEEEEEEE-EEEEECCceEEEEEEEeeEEcCCccceEEEEEcCCCCccccccEEEEEE
Confidence            4457888899999874  356666666652 221  223577  5556777777778899999  999999999999988


Q ss_pred             EE
Q 041927          214 RA  215 (239)
Q Consensus       214 ~t  215 (239)
                      +.
T Consensus       117 ~~  118 (133)
T d2ooja1         117 SI  118 (133)
T ss_dssp             EE
T ss_pred             EE
Confidence            64