Citrus Sinensis ID: 041965

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160------
Protein Sequence
MALGGRRGLGFNPVRIKIFGGAKNVNVSHVIHDLSFGPKYPGIHNPLDGTVRMLHDTSGTFKYYIKIVPTEYRYISKDVLPTNQFSVTEYFSTFNEFDRTWPAVYFLYDLSPITVTIKEERRSFLHLITRLCAVLGGTFALTGMLDRWMYRLLEALTKPSARSVLR
Secondary Structure (PSIPRED)
ccccccccccccccEEEEccccccccccEEEEEEEEcccccccccccccEEEEEccccEEEEEEEEEEEEEEEEccccEEEEEEEEEEEEEEEEccccccccEEEEEEEcccEEEEEEEEEccHHHHHHHHHHHHccHHEHHHHHHHHHHHHHHHHcccccccccc
Secondary Structure Prediction (SSPRO)
ccccccccccccccccEEccccccccEEEEEEEcccccccccccccccccEEEccccccEEEEEEEEEEEEEEEcccEEEEccEEEEEEEEEEcccccccccEEEEEEEcccEEEEEEccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccc
Coil and Loop (DISEMBL)
malggrrglgfnpvRIKIFGGAKNVNVSHVIhdlsfgpkypgihnpldgtvrmlhdtsgtfkYYIKIvpteyryiskdvlptnqfsVTEYFSTFnefdrtwpavyflydlspitvTIKEERRSFLHLITRLCAVLGGTFALTGMLDRWMYRLLEALTkpsarsvlr
Flexible Loop (DISEMBL)
malggrrglgfnpVRIKIFGGAKNVNVSHVIHDLSFGPKYPGIHNPLDGTVRMLHDTSGTFKYYIKIVPTEYRYISKDVLPTNQFSVTEYFSTFNEFDRTWPAVYFLYDLSPITVTIKEERRSFLHLITRLCAVLGGTFALTGMLDRWMYRLLEaltkpsarsvlr
Low Complexity Region (SEG)
MALGGRRGLGFNPVRIKIFGGAKNVNVSHVIHDLSFGPKYPGIHNPLDGTVRMLHDTSGTFKYYIKIVPTEYRYISKDVLPTNQFSVTEYFSTFNEFDRTWPAVYFLYDLSPITVTIKEERRSFLHLITRLCAVLGGTFALTGMLDRWMYRLLEALTKPSARSVLR
Disordered region (IsUnstruct)
*******GLGFNPVRIKIFGGAKNVNVSHVIHDLSFGPKYPGIHNPLDGTVRMLHDTSGTFKYYIKIVPTEYRYISKDVLPTNQFSVTEYFSTFNEFDRTWPAVYFLYDLSPITVTIKEERRSFLHLITRLCAVLGGTFALTGMLDRWMYRLLEAL**********
Disordered Region (DISOPRED)
*************VRIKIFGGAKNVNVSHVIHDLSFGPKYPGIHNPLDGTVRMLHDTSGTFKYYIKIVPTEYRYISKDVLPTNQFSVTEYFSTFNEFDRTWPAVYFLYDLSPITVTIKEERRSFLHLITRLCAVLGGTFALTGMLDRWMYRLLEAL**********
Disordered Region (DISEMBL)
MALGGRRGLGFNPVRIKIFGGAKNVNVSHVIHDLSFGPKYPGIHNPLDGTVRMLHDTSGTFKYYIKIVPTEYRYISKDVLPTNQFSVTEYFSTFNEFDRTWPAVYFLYDLSPITVTIKEERRSFLHLITRLCAVLGGTFALTGMLDRWMYRLLEALTK********
Disordered Region (DISPRO)
*****RRGLGFNPVRIKIFGGAKNVNVSHVIHDLSFGPKYPGIHNPLDGTVRMLHDTSGTFKYYIKIVPTEYRYISKDVLPTNQFSVTEYFSTFNEFDRTWPAVYFLYDLSPITVTIKEERRSFLHLITRLCAVLGGTFALTGMLDRWMYRLLEALTKP*******
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MALGGRRGLGFNPVRIKIFGGAKNVNVSHVIHDLSFGPKYPGIHNPLDGTVRMLHDTSGTFKYYIKIVPTEYRYISKDVLPTNQFSVTEYFSTFNEFDRTWPAVYFLYDLSPITVTIKEERRSFLHLITRLCAVLGGTFALTGMLDRWMYRLLEALTKPSARSVLR
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	166	2.2.26 [Sep-21-2011]
Q66KH2	389	Endoplasmic reticulum-Gol	N/A	no	0.831	0.354	0.442	7e-29
Q4R8X1	382	Endoplasmic reticulum-Gol	N/A	no	0.831	0.361	0.435	2e-28
Q9Y282	383	Endoplasmic reticulum-Gol	yes	no	0.831	0.360	0.435	2e-28
Q5R8G3	383	Endoplasmic reticulum-Gol	yes	no	0.831	0.360	0.435	2e-28
Q6NVS2	384	Endoplasmic reticulum-Gol	yes	no	0.831	0.359	0.435	2e-28
Q9CQE7	383	Endoplasmic reticulum-Gol	yes	no	0.831	0.360	0.435	3e-28
Q5EAE0	383	Endoplasmic reticulum-Gol	yes	no	0.831	0.360	0.435	3e-28
Q803I2	383	Endoplasmic reticulum-Gol	yes	no	0.831	0.360	0.428	4e-27
Q54DW2	383	Probable endoplasmic reti	yes	no	0.801	0.347	0.397	9e-25
Q4V8Y6	290	Endoplasmic reticulum-Gol	no	no	0.801	0.458	0.359	1e-18

>sp|Q66KH2|ERGI3_XENLA Endoplasmic reticulum-Golgi intermediate compartment protein 3 OS=Xenopus laevis GN=ergic3 PE=2 SV=1

 Score =  126 bits (316), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 62/140 (44%), Positives = 88/140 (62%), Gaps = 2/140 (1%)

Query: 21  GAKNVNVSHVIHDLSFGPKYPGIHNPLDGTVRMLHDTSGTFKYYIKIVPTEYRYISKDVL 80
           G  N+N++H I  LSFG  YPG+ NPLDGT  +   +S  F+Y++KIVPT Y  +  +VL
Sbjct: 242 GLDNINMTHEIKHLSFGKDYPGLVNPLDGTSIVAMQSSMMFQYFVKIVPTVYVKVDGEVL 301

Query: 81  PTNQFSVTEYFSTFNEF--DRTWPAVYFLYDLSPITVTIKEERRSFLHLITRLCAVLGGT 138
            TNQFSVT +    N    D+  P V+ LY+LSP+ V   E+ RSF H +T +CA++GG 
Sbjct: 302 RTNQFSVTRHEKMTNGLIGDQGLPGVFVLYELSPMMVKFTEKHRSFTHFLTGVCAIIGGV 361

Query: 139 FALTGMLDRWMYRLLEALTK 158
           F + G++D  +Y    A+ K
Sbjct: 362 FTVAGLIDSLIYYSTRAIQK 381

Possible role in transport between endoplasmic reticulum and Golgi.
Xenopus laevis (taxid: 8355)

>sp|Q4R8X1|ERGI3_MACFA Endoplasmic reticulum-Golgi intermediate compartment protein 3 OS=Macaca fascicularis GN=ERGIC3 PE=2 SV=1

 Score =  125 bits (313), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 61/140 (43%), Positives = 86/140 (61%), Gaps = 2/140 (1%)

Query: 21  GAKNVNVSHVIHDLSFGPKYPGIHNPLDGTVRMLHDTSGTFKYYIKIVPTEYRYISKDVL 80
           G  N+N++H I  LSFG  YPGI NPLD T       S  F+Y++K+VPT Y  +  +VL
Sbjct: 235 GLDNINMTHYIQHLSFGEDYPGIVNPLDHTNVTAPQASMMFQYFVKVVPTVYMKVDGEVL 294

Query: 81  PTNQFSVTEYFSTFNEF--DRTWPAVYFLYDLSPITVTIKEERRSFLHLITRLCAVLGGT 138
            TNQFSVT +    N    D+  P V+ LY+LSP+ V + E+ RSF H +T +CA++GG 
Sbjct: 295 RTNQFSVTRHEKVANGLLGDQGLPGVFVLYELSPMMVKLTEKHRSFTHFLTGVCAIIGGM 354

Query: 139 FALTGMLDRWMYRLLEALTK 158
           F + G++D  +Y    A+ K
Sbjct: 355 FTVAGLIDSLIYHSARAIQK 374

Possible role in transport between endoplasmic reticulum and Golgi.

Macaca fascicularis (taxid: 9541)

>sp|Q9Y282|ERGI3_HUMAN Endoplasmic reticulum-Golgi intermediate compartment protein 3 OS=Homo sapiens GN=ERGIC3 PE=1 SV=1

 Score =  124 bits (312), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 61/140 (43%), Positives = 86/140 (61%), Gaps = 2/140 (1%)

Query: 21  GAKNVNVSHVIHDLSFGPKYPGIHNPLDGTVRMLHDTSGTFKYYIKIVPTEYRYISKDVL 80
           G  N+N++H I  LSFG  YPGI NPLD T       S  F+Y++K+VPT Y  +  +VL
Sbjct: 236 GLDNINMTHYIQHLSFGEDYPGIVNPLDHTNVTAPQASMMFQYFVKVVPTVYMKVDGEVL 295

Query: 81  PTNQFSVTEYFSTFNEF--DRTWPAVYFLYDLSPITVTIKEERRSFLHLITRLCAVLGGT 138
            TNQFSVT +    N    D+  P V+ LY+LSP+ V + E+ RSF H +T +CA++GG 
Sbjct: 296 RTNQFSVTRHEKVANGLLGDQGLPGVFVLYELSPMMVKLTEKHRSFTHFLTGVCAIIGGM 355

Query: 139 FALTGMLDRWMYRLLEALTK 158
           F + G++D  +Y    A+ K
Sbjct: 356 FTVAGLIDSLIYHSARAIQK 375

Possible role in transport between endoplasmic reticulum and Golgi.

Homo sapiens (taxid: 9606)

>sp|Q5R8G3|ERGI3_PONAB Endoplasmic reticulum-Golgi intermediate compartment protein 3 OS=Pongo abelii GN=ERGIC3 PE=2 SV=1

 Score =  124 bits (312), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 61/140 (43%), Positives = 86/140 (61%), Gaps = 2/140 (1%)

Query: 21  GAKNVNVSHVIHDLSFGPKYPGIHNPLDGTVRMLHDTSGTFKYYIKIVPTEYRYISKDVL 80
           G  N+N++H I  LSFG  YPGI NPLD T       S  F+Y++K+VPT Y  +  +VL
Sbjct: 236 GLDNINMTHYIQHLSFGEDYPGIVNPLDHTNVTAPQASMMFQYFVKVVPTVYMKVDGEVL 295

Query: 81  PTNQFSVTEYFSTFNEF--DRTWPAVYFLYDLSPITVTIKEERRSFLHLITRLCAVLGGT 138
            TNQFSVT +    N    D+  P V+ LY+LSP+ V + E+ RSF H +T +CA++GG 
Sbjct: 296 RTNQFSVTRHEKVANGLLGDQGLPGVFVLYELSPMMVKLTEKHRSFTHFLTGVCAIIGGM 355

Query: 139 FALTGMLDRWMYRLLEALTK 158
           F + G++D  +Y    A+ K
Sbjct: 356 FTVAGLIDSLIYHSARAIQK 375

Possible role in transport between endoplasmic reticulum and Golgi.

Pongo abelii (taxid: 9601)

>sp|Q6NVS2|ERGI3_XENTR Endoplasmic reticulum-Golgi intermediate compartment protein 3 OS=Xenopus tropicalis GN=ergic3 PE=2 SV=1

 Score =  124 bits (312), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 61/140 (43%), Positives = 88/140 (62%), Gaps = 2/140 (1%)

Query: 21  GAKNVNVSHVIHDLSFGPKYPGIHNPLDGTVRMLHDTSGTFKYYIKIVPTEYRYISKDVL 80
           G  N+N++H I  LSFG  YPG+ NPLDG+      +S  F+Y++KIVPT Y  +  +VL
Sbjct: 237 GLDNINMTHEIRHLSFGRDYPGLVNPLDGSSVAAMQSSMMFQYFVKIVPTVYVKVDGEVL 296

Query: 81  PTNQFSVTEYFSTFNEF--DRTWPAVYFLYDLSPITVTIKEERRSFLHLITRLCAVLGGT 138
            TNQFSVT +    N    D+  P V+ LY+LSP+ V + E+ RSF H +T +CA++GG 
Sbjct: 297 RTNQFSVTRHEKMTNGLIGDQGLPGVFVLYELSPMMVKLTEKHRSFTHFLTGVCAIIGGV 356

Query: 139 FALTGMLDRWMYRLLEALTK 158
           F + G++D  +Y    A+ K
Sbjct: 357 FTVAGLIDSLVYYSTRAIQK 376

Possible role in transport between endoplasmic reticulum and Golgi.

Xenopus tropicalis (taxid: 8364)

>sp|Q9CQE7|ERGI3_MOUSE Endoplasmic reticulum-Golgi intermediate compartment protein 3 OS=Mus musculus GN=Ergic3 PE=2 SV=1

 Score =  124 bits (311), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 61/140 (43%), Positives = 86/140 (61%), Gaps = 2/140 (1%)

Query: 21  GAKNVNVSHVIHDLSFGPKYPGIHNPLDGTVRMLHDTSGTFKYYIKIVPTEYRYISKDVL 80
           G  N+N++H I  LSFG  YPGI NPLD T       S  F+Y++K+VPT Y  +  +VL
Sbjct: 236 GLDNINMTHYIKHLSFGEDYPGIVNPLDHTNVTAPQASMMFQYFVKVVPTVYMKVDGEVL 295

Query: 81  PTNQFSVTEYFSTFNEF--DRTWPAVYFLYDLSPITVTIKEERRSFLHLITRLCAVLGGT 138
            TNQFSVT +    N    D+  P V+ LY+LSP+ V + E+ RSF H +T +CA++GG 
Sbjct: 296 RTNQFSVTRHEKVANGLLGDQGLPGVFVLYELSPMMVKLTEKHRSFTHFLTGVCAIIGGM 355

Query: 139 FALTGMLDRWMYRLLEALTK 158
           F + G++D  +Y    A+ K
Sbjct: 356 FTVAGLIDSLIYHSARAIQK 375

Possible role in transport between endoplasmic reticulum and Golgi.

Mus musculus (taxid: 10090)

>sp|Q5EAE0|ERGI3_BOVIN Endoplasmic reticulum-Golgi intermediate compartment protein 3 OS=Bos taurus GN=ERGIC3 PE=2 SV=1

 Score =  124 bits (310), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 61/140 (43%), Positives = 86/140 (61%), Gaps = 2/140 (1%)

Query: 21  GAKNVNVSHVIHDLSFGPKYPGIHNPLDGTVRMLHDTSGTFKYYIKIVPTEYRYISKDVL 80
           G  N+N++H I  LSFG  YPGI NPLD T       S  F+Y++K+VPT Y  +  +VL
Sbjct: 236 GLDNINMTHYIRHLSFGEDYPGIVNPLDHTNVTAPQASMMFQYFVKVVPTVYMKVDGEVL 295

Query: 81  PTNQFSVTEYFSTFNEF--DRTWPAVYFLYDLSPITVTIKEERRSFLHLITRLCAVLGGT 138
            TNQFSVT +    N    D+  P V+ LY+LSP+ V + E+ RSF H +T +CA++GG 
Sbjct: 296 RTNQFSVTRHEKVANGLMGDQGLPGVFVLYELSPMMVKLTEKHRSFTHFLTGVCAIIGGM 355

Query: 139 FALTGMLDRWMYRLLEALTK 158
           F + G++D  +Y    A+ K
Sbjct: 356 FTVAGLIDSLIYHSARAIQK 375

Possible role in transport between endoplasmic reticulum and Golgi.

Bos taurus (taxid: 9913)

>sp|Q803I2|ERGI3_DANRE Endoplasmic reticulum-Golgi intermediate compartment protein 3 OS=Danio rerio GN=ergic3 PE=2 SV=1

 Score =  120 bits (301), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 60/140 (42%), Positives = 85/140 (60%), Gaps = 2/140 (1%)

Query: 21  GAKNVNVSHVIHDLSFGPKYPGIHNPLDGTVRMLHDTSGTFKYYIKIVPTEYRYISKDVL 80
           G  N+N++H I  LSFG  YPGI NPLD T       S  ++Y++KIVPT Y     +V+
Sbjct: 236 GLDNINMTHFIKHLSFGKDYPGIVNPLDDTNVAAPQASMMYQYFVKIVPTIYVKGDGEVV 295

Query: 81  PTNQFSVTEYFSTFNEF--DRTWPAVYFLYDLSPITVTIKEERRSFLHLITRLCAVLGGT 138
            TNQFSVT +    N    D+  P V+ LY+LSP+ V   E++RSF H +T +CA++GG 
Sbjct: 296 KTNQFSVTRHEKIANGLIGDQGLPGVFVLYELSPMMVKFTEKQRSFTHFLTGVCAIIGGV 355

Query: 139 FALTGMLDRWMYRLLEALTK 158
           F + G++D  +Y    A+ K
Sbjct: 356 FTVAGLIDSLIYHSARAIQK 375

Possible role in transport between endoplasmic reticulum and Golgi.

Danio rerio (taxid: 7955)

>sp|Q54DW2|ERGI3_DICDI Probable endoplasmic reticulum-Golgi intermediate compartment protein 3 OS=Dictyostelium discoideum GN=ergic3 PE=3 SV=1

 Score =  112 bits (281), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 54/136 (39%), Positives = 84/136 (61%), Gaps = 3/136 (2%)

Query: 26  NVSHVIHDLSFGPKYPGIHNPLDGTVRMLHDTSGTFKYYIKIVPTEYRYISKDVLPTNQF 85
           NVSH I+ LSFG  +PGI NPLD   +      G F+Y++K+VPT Y  ++ + + TNQ+
Sbjct: 240 NVSHTINRLSFGNDFPGIKNPLDDVTKTEMVGVGMFQYFVKVVPTIYEGLNGNRIATNQY 299

Query: 86  SVTEYF---STFNEFDRTWPAVYFLYDLSPITVTIKEERRSFLHLITRLCAVLGGTFALT 142
           SVTE++   +   E     P ++F+YDLSPI + + E  +SF   +T +CA++GG F + 
Sbjct: 300 SVTEHYRLLAKKGEEPSGLPGLFFMYDLSPIMMKVSERGKSFASFLTNVCAIIGGVFTVF 359

Query: 143 GMLDRWMYRLLEALTK 158
           G+ D ++Y   + L K
Sbjct: 360 GIFDSFIYYSTKNLQK 375

Possible role in transport between endoplasmic reticulum and Golgi.

Dictyostelium discoideum (taxid: 44689)

>sp|Q4V8Y6|ERGI1_DANRE Endoplasmic reticulum-Golgi intermediate compartment protein 1 OS=Danio rerio GN=ergic1 PE=2 SV=1

 Score = 92.4 bits (228), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 50/139 (35%), Positives = 77/139 (55%), Gaps = 6/139 (4%)

Query: 26  NVSHVIHDLSFGPK-----YPGIHNPLDGTVRMLHDTSGTFKYYIKIVPTEYRYISKDVL 80
           +++H+IH L+FG K       G  N L G  R+  +   +  Y +KIVPT Y  +     
Sbjct: 145 DMTHIIHKLAFGAKLQVQHVQGAFNALGGADRLQSNALASHDYILKIVPTVYEELGGKQR 204

Query: 81  PTNQFSVT-EYFSTFNEFDRTWPAVYFLYDLSPITVTIKEERRSFLHLITRLCAVLGGTF 139
            + Q++V  + +  ++   R  PA++F YDLSPITV   E RR F   IT +CA++GGTF
Sbjct: 205 FSYQYTVANKEYVAYSHTGRIIPAIWFRYDLSPITVKYTERRRPFYRFITTICAIIGGTF 264

Query: 140 ALTGMLDRWMYRLLEALTK 158
            + G++D  ++   EA  K
Sbjct: 265 TVAGIIDSCIFTASEAWKK 283

Possible role in transport between endoplasmic reticulum and Golgi.

Danio rerio (taxid: 7955)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	166
224086657	351	predicted protein [Populus trichocarpa]	0.897	0.424	0.899	8e-75
225446891	351	PREDICTED: endoplasmic reticulum-Golgi i	0.897	0.424	0.865	4e-72
118482697	366	unknown [Populus trichocarpa]	0.879	0.398	0.883	5e-72
356547537	351	PREDICTED: probable endoplasmic reticulu	0.873	0.413	0.868	7e-72
224137484	351	predicted protein [Populus trichocarpa]	0.879	0.415	0.883	7e-72
356575088	347	PREDICTED: endoplasmic reticulum-Golgi i	0.873	0.417	0.862	2e-71
255563175	191	Endoplasmic reticulum-Golgi intermediate	0.873	0.759	0.875	3e-71
255637400	347	unknown [Glycine max]	0.873	0.417	0.855	8e-71
297830940	354	hypothetical protein ARALYDRAFT_479742 [	0.867	0.406	0.861	3e-70
449479952	266	PREDICTED: endoplasmic reticulum-Golgi i	0.879	0.548	0.863	4e-70

>gi|224086657|ref|XP_002307923.1| predicted protein [Populus trichocarpa] gi|222853899|gb|EEE91446.1| predicted protein [Populus trichocarpa]

 Score =  284 bits (727), Expect = 8e-75,   Method: Compositional matrix adjust.
 Identities = 134/149 (89%), Positives = 141/149 (94%)

Query: 18  IFGGAKNVNVSHVIHDLSFGPKYPGIHNPLDGTVRMLHDTSGTFKYYIKIVPTEYRYISK 77
           IF GAK+VNVSH+IHDLSFGPKYPGIHNPLDGT R+LH+TSGTFKYYIKIVPTEYRYISK
Sbjct: 203 IFDGAKHVNVSHIIHDLSFGPKYPGIHNPLDGTTRILHETSGTFKYYIKIVPTEYRYISK 262

Query: 78  DVLPTNQFSVTEYFSTFNEFDRTWPAVYFLYDLSPITVTIKEERRSFLHLITRLCAVLGG 137
           +VLPTNQFSVTEYFS   +FDRTWPAVYFLYDLSPITVTIKEERRSFLH ITRLCAVLGG
Sbjct: 263 EVLPTNQFSVTEYFSPMTDFDRTWPAVYFLYDLSPITVTIKEERRSFLHFITRLCAVLGG 322

Query: 138 TFALTGMLDRWMYRLLEALTKPSARSVLR 166
           TFALTGMLDRWM RLLEALTKP+ RSVLR
Sbjct: 323 TFALTGMLDRWMCRLLEALTKPNPRSVLR 351

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225446891|ref|XP_002284045.1| PREDICTED: endoplasmic reticulum-Golgi intermediate compartment protein 3 [Vitis vinifera] gi|296086333|emb|CBI31774.3| unnamed protein product [Vitis vinifera]

 Score =  275 bits (703), Expect = 4e-72,   Method: Compositional matrix adjust.
 Identities = 129/149 (86%), Positives = 137/149 (91%)

Query: 18  IFGGAKNVNVSHVIHDLSFGPKYPGIHNPLDGTVRMLHDTSGTFKYYIKIVPTEYRYISK 77
           IF GA +VNVSH+IHDLSFGPKYPG+HNPLDGTVR+L   SGTFKYYIKIVPTEYRYISK
Sbjct: 203 IFDGAIHVNVSHIIHDLSFGPKYPGLHNPLDGTVRILRGASGTFKYYIKIVPTEYRYISK 262

Query: 78  DVLPTNQFSVTEYFSTFNEFDRTWPAVYFLYDLSPITVTIKEERRSFLHLITRLCAVLGG 137
           +VLPTNQFSV EYFS  NEFDRTWPAVYFLYDLSP+TVTIKEERRSFLH ITRLCAVLGG
Sbjct: 263 EVLPTNQFSVMEYFSPMNEFDRTWPAVYFLYDLSPVTVTIKEERRSFLHFITRLCAVLGG 322

Query: 138 TFALTGMLDRWMYRLLEALTKPSARSVLR 166
           TFALTGMLDRWMYR LE LTKP+A+SV R
Sbjct: 323 TFALTGMLDRWMYRFLEMLTKPNAKSVYR 351

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|118482697|gb|ABK93267.1| unknown [Populus trichocarpa]

 Score =  275 bits (703), Expect = 5e-72,   Method: Compositional matrix adjust.
 Identities = 129/146 (88%), Positives = 136/146 (93%)

Query: 18  IFGGAKNVNVSHVIHDLSFGPKYPGIHNPLDGTVRMLHDTSGTFKYYIKIVPTEYRYISK 77
           IF GAK+VNVSH+IHDLSFGPKYPGIHNPLDGT R+L +TSG FKYYIKIVPTEYRYISK
Sbjct: 218 IFDGAKHVNVSHIIHDLSFGPKYPGIHNPLDGTARILRETSGIFKYYIKIVPTEYRYISK 277

Query: 78  DVLPTNQFSVTEYFSTFNEFDRTWPAVYFLYDLSPITVTIKEERRSFLHLITRLCAVLGG 137
           DVLPTNQFSVTEYFS   +FDRTWPAVYFLYDLSPITVTIKEERRSFLH ITRLCA+LGG
Sbjct: 278 DVLPTNQFSVTEYFSPITDFDRTWPAVYFLYDLSPITVTIKEERRSFLHFITRLCAILGG 337

Query: 138 TFALTGMLDRWMYRLLEALTKPSARS 163
           TFALTGMLDRWMYRLLEALTKP+  S
Sbjct: 338 TFALTGMLDRWMYRLLEALTKPNRGS 363

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356547537|ref|XP_003542168.1| PREDICTED: probable endoplasmic reticulum-Golgi intermediate compartment protein 3-like [Glycine max]

 Score =  275 bits (702), Expect = 7e-72,   Method: Compositional matrix adjust.
 Identities = 126/145 (86%), Positives = 136/145 (93%)

Query: 18  IFGGAKNVNVSHVIHDLSFGPKYPGIHNPLDGTVRMLHDTSGTFKYYIKIVPTEYRYISK 77
           IF GAKNVNVSH IHDLSFGPKYPG+HNPLD T R+LHDTSGTFKYYIK+VPTEYRYISK
Sbjct: 206 IFDGAKNVNVSHFIHDLSFGPKYPGLHNPLDDTTRILHDTSGTFKYYIKVVPTEYRYISK 265

Query: 78  DVLPTNQFSVTEYFSTFNEFDRTWPAVYFLYDLSPITVTIKEERRSFLHLITRLCAVLGG 137
           +VLPTNQFSV+EY+S  N+FDRTWPAVYFLYDLSPITVTIKEERRSFLH ITRLCAVLGG
Sbjct: 266 EVLPTNQFSVSEYYSPINQFDRTWPAVYFLYDLSPITVTIKEERRSFLHFITRLCAVLGG 325

Query: 138 TFALTGMLDRWMYRLLEALTKPSAR 162
           TFA+TGMLDRWMYRLLEALTK  ++
Sbjct: 326 TFAVTGMLDRWMYRLLEALTKSKSK 350

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224137484|ref|XP_002322569.1| predicted protein [Populus trichocarpa] gi|222867199|gb|EEF04330.1| predicted protein [Populus trichocarpa]

 Score =  275 bits (702), Expect = 7e-72,   Method: Compositional matrix adjust.
 Identities = 129/146 (88%), Positives = 136/146 (93%)

Query: 18  IFGGAKNVNVSHVIHDLSFGPKYPGIHNPLDGTVRMLHDTSGTFKYYIKIVPTEYRYISK 77
           IF GAK+VNVSH+IHDLSFGPKYPGIHNPLDGT R+L +TSG FKYYIKIVPTEYRYISK
Sbjct: 203 IFDGAKHVNVSHIIHDLSFGPKYPGIHNPLDGTARILRETSGIFKYYIKIVPTEYRYISK 262

Query: 78  DVLPTNQFSVTEYFSTFNEFDRTWPAVYFLYDLSPITVTIKEERRSFLHLITRLCAVLGG 137
           DVLPTNQFSVTEYFS   +FDRTWPAVYFLYDLSPITVTIKEERRSFLH ITRLCA+LGG
Sbjct: 263 DVLPTNQFSVTEYFSPITDFDRTWPAVYFLYDLSPITVTIKEERRSFLHFITRLCAILGG 322

Query: 138 TFALTGMLDRWMYRLLEALTKPSARS 163
           TFALTGMLDRWMYRLLEALTKP+  S
Sbjct: 323 TFALTGMLDRWMYRLLEALTKPNRGS 348

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356575088|ref|XP_003555674.1| PREDICTED: endoplasmic reticulum-Golgi intermediate compartment protein 3-like [Glycine max]

 Score =  273 bits (697), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 125/145 (86%), Positives = 135/145 (93%)

Query: 18  IFGGAKNVNVSHVIHDLSFGPKYPGIHNPLDGTVRMLHDTSGTFKYYIKIVPTEYRYISK 77
           IF GAKNVNVSH IHDLSFGPKYPG+HNPLD T R+LHDTSGTFKYYIK+VPTEYRYISK
Sbjct: 202 IFDGAKNVNVSHFIHDLSFGPKYPGLHNPLDDTTRILHDTSGTFKYYIKVVPTEYRYISK 261

Query: 78  DVLPTNQFSVTEYFSTFNEFDRTWPAVYFLYDLSPITVTIKEERRSFLHLITRLCAVLGG 137
           +VLPTNQFSV+EY+S  N+FDRTWPAVYFLYDLSPITVTIKEERRSFLH ITRLCAVLGG
Sbjct: 262 EVLPTNQFSVSEYYSPINQFDRTWPAVYFLYDLSPITVTIKEERRSFLHFITRLCAVLGG 321

Query: 138 TFALTGMLDRWMYRLLEALTKPSAR 162
           TFA+TGMLDRWMYRLLE LTK  ++
Sbjct: 322 TFAVTGMLDRWMYRLLETLTKSKSK 346

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255563175|ref|XP_002522591.1| Endoplasmic reticulum-Golgi intermediate compartment protein, putative [Ricinus communis] gi|223538182|gb|EEF39792.1| Endoplasmic reticulum-Golgi intermediate compartment protein, putative [Ricinus communis]

 Score =  273 bits (697), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 127/145 (87%), Positives = 137/145 (94%)

Query: 18  IFGGAKNVNVSHVIHDLSFGPKYPGIHNPLDGTVRMLHDTSGTFKYYIKIVPTEYRYISK 77
           IF GA +VNVSH+IHDLSFGPK+PG+HNPLDGT R+LHD SGTFKYYIKIVPTEYRYISK
Sbjct: 45  IFDGAIHVNVSHIIHDLSFGPKFPGLHNPLDGTARILHDASGTFKYYIKIVPTEYRYISK 104

Query: 78  DVLPTNQFSVTEYFSTFNEFDRTWPAVYFLYDLSPITVTIKEERRSFLHLITRLCAVLGG 137
           +VLPTNQFSVTEYFS  +E+DRTWPAVYFLYDLSPITVTIKEERRSFLH ITRLCAVLGG
Sbjct: 105 EVLPTNQFSVTEYFSPMSEYDRTWPAVYFLYDLSPITVTIKEERRSFLHFITRLCAVLGG 164

Query: 138 TFALTGMLDRWMYRLLEALTKPSAR 162
           TFALTGMLDRWMYRLLEA+TKP+ R
Sbjct: 165 TFALTGMLDRWMYRLLEAVTKPNTR 189

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255637400|gb|ACU19028.1| unknown [Glycine max]

 Score =  271 bits (692), Expect = 8e-71,   Method: Compositional matrix adjust.
 Identities = 124/145 (85%), Positives = 134/145 (92%)

Query: 18  IFGGAKNVNVSHVIHDLSFGPKYPGIHNPLDGTVRMLHDTSGTFKYYIKIVPTEYRYISK 77
           IF GAKNVNVSH IHDLSFGPKYPG+HNPLD T R+LHDTSGTFKYYIK+VPTEYRYISK
Sbjct: 202 IFDGAKNVNVSHFIHDLSFGPKYPGLHNPLDDTTRILHDTSGTFKYYIKVVPTEYRYISK 261

Query: 78  DVLPTNQFSVTEYFSTFNEFDRTWPAVYFLYDLSPITVTIKEERRSFLHLITRLCAVLGG 137
           +VLPTNQFSV+EY+S  N+FDRTWPAVYFLYDLSPITVTIKEERRSF H ITRLCAVLGG
Sbjct: 262 EVLPTNQFSVSEYYSPINQFDRTWPAVYFLYDLSPITVTIKEERRSFFHFITRLCAVLGG 321

Query: 138 TFALTGMLDRWMYRLLEALTKPSAR 162
           TFA+TGMLDRWMYRLLE LTK  ++
Sbjct: 322 TFAVTGMLDRWMYRLLETLTKSKSK 346

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297830940|ref|XP_002883352.1| hypothetical protein ARALYDRAFT_479742 [Arabidopsis lyrata subsp. lyrata] gi|297329192|gb|EFH59611.1| hypothetical protein ARALYDRAFT_479742 [Arabidopsis lyrata subsp. lyrata]

 Score =  269 bits (687), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 124/144 (86%), Positives = 135/144 (93%)

Query: 18  IFGGAKNVNVSHVIHDLSFGPKYPGIHNPLDGTVRMLHDTSGTFKYYIKIVPTEYRYISK 77
           IFGG+KNVNVSH+IHDLSFGPKYPGIHNPLD T R+LHDTSGTFKYYIKIVPTEYRY+SK
Sbjct: 208 IFGGSKNVNVSHMIHDLSFGPKYPGIHNPLDDTNRILHDTSGTFKYYIKIVPTEYRYLSK 267

Query: 78  DVLPTNQFSVTEYFSTFNEFDRTWPAVYFLYDLSPITVTIKEERRSFLHLITRLCAVLGG 137
           DVL TNQ+SVTEY++   EFDRTWPAVYFLYDLSPITVTIKEERRSFLHLITRLCAVLGG
Sbjct: 268 DVLSTNQYSVTEYYTPMTEFDRTWPAVYFLYDLSPITVTIKEERRSFLHLITRLCAVLGG 327

Query: 138 TFALTGMLDRWMYRLLEALTKPSA 161
           TFALTGMLDRWM+RL+E+  K S+
Sbjct: 328 TFALTGMLDRWMFRLIESFNKKSS 351

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449479952|ref|XP_004155757.1| PREDICTED: endoplasmic reticulum-Golgi intermediate compartment protein 3-like [Cucumis sativus]

 Score =  269 bits (687), Expect = 4e-70,   Method: Compositional matrix adjust.
 Identities = 126/146 (86%), Positives = 136/146 (93%)

Query: 18  IFGGAKNVNVSHVIHDLSFGPKYPGIHNPLDGTVRMLHDTSGTFKYYIKIVPTEYRYISK 77
           IFGG+K+VNVSH+IHDLSFGPKYPGIHNPLDGTVR+L DTSGTFKYYIKIVPTEY+YISK
Sbjct: 120 IFGGSKHVNVSHMIHDLSFGPKYPGIHNPLDGTVRILRDTSGTFKYYIKIVPTEYKYISK 179

Query: 78  DVLPTNQFSVTEYFSTFNEFDRTWPAVYFLYDLSPITVTIKEERRSFLHLITRLCAVLGG 137
            VLPTNQFSVTEYFS   + DR+WPAVYFLYDLSPITVTIKEERRSFLH ITRLCAVLGG
Sbjct: 180 AVLPTNQFSVTEYFSPMTDSDRSWPAVYFLYDLSPITVTIKEERRSFLHFITRLCAVLGG 239

Query: 138 TFALTGMLDRWMYRLLEALTKPSARS 163
           TFA+TGMLDRWM+R LEALTKP  R+
Sbjct: 240 TFAVTGMLDRWMFRFLEALTKPKRRT 265

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	166
TAIR|locus:2087817	354	AT3G22290 "AT3G22290" [Arabido	0.879	0.412	0.857	6.5e-67
UNIPROTKB|Q5EAE0	383	ERGIC3 "Endoplasmic reticulum-	0.831	0.360	0.435	6.4e-28
UNIPROTKB|Q9Y282	383	ERGIC3 "Endoplasmic reticulum-	0.831	0.360	0.435	6.4e-28
MGI|MGI:1913616	383	Ergic3 "ERGIC and golgi 3" [Mu	0.831	0.360	0.435	8.2e-28
TAIR|locus:2015056	386	AT1G22200 "AT1G22200" [Arabido	0.807	0.347	0.416	1.9e-26
ZFIN|ZDB-GENE-040426-795	383	ergic3 "ERGIC and golgi 3" [Da	0.831	0.360	0.428	2.5e-26
TAIR|locus:2034330	489	AT1G36050 "AT1G36050" [Arabido	0.795	0.269	0.429	1.8e-25
DICTYBASE|DDB_G0292002	383	ergic3 "endoplasmic reticulum-	0.801	0.347	0.397	3.3e-24
FB|FBgn0036489	373	CG7011 [Drosophila melanogaste	0.807	0.359	0.407	9.7e-21
CGD|CAL0003347	345	orf19.5941 [Candida albicans (	0.783	0.376	0.375	1.2e-19

TAIR|locus:2087817 AT3G22290 "AT3G22290" [Arabidopsis thaliana (taxid:3702)]

 Score = 680 (244.4 bits), Expect = 6.5e-67, P = 6.5e-67
 Identities = 126/147 (85%), Positives = 136/147 (92%)

Query:    18 IFGGAKNVNVSHVIHDLSFGPKYPGIHNPLDGTVRMLHDTSGTFKYYIKIVPTEYRYISK 77
             IFGG+KNVNVSH+IHDLSFGPKYPGIHNPLD T R+LHDTSGTFKYYIKIVPTEYRY+SK
Sbjct:   208 IFGGSKNVNVSHMIHDLSFGPKYPGIHNPLDDTNRILHDTSGTFKYYIKIVPTEYRYLSK 267

Query:    78 DVLPTNQFSVTEYFSTFNEFDRTWPAVYFLYDLSPITVTIKEERRSFLHLITRLCAVLGG 137
             DVL TNQ+SVTEYF+   EFDRTWPAVYFLYDLSPITVTIKEERRSFLHLITRLCAVLGG
Sbjct:   268 DVLSTNQYSVTEYFTPMTEFDRTWPAVYFLYDLSPITVTIKEERRSFLHLITRLCAVLGG 327

Query:   138 TFALTGMLDRWMYRLLEALTK-PSARS 163
             TFALTGMLDRWM+R +E+  K PS R+
Sbjct:   328 TFALTGMLDRWMFRFIESFNKKPSTRA 354

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0005783 "endoplasmic reticulum" evidence=IDA

UNIPROTKB|Q5EAE0 ERGIC3 "Endoplasmic reticulum-Golgi intermediate compartment protein 3" [Bos taurus (taxid:9913)]

 Score = 312 (114.9 bits), Expect = 6.4e-28, P = 6.4e-28
 Identities = 61/140 (43%), Positives = 86/140 (61%)

Query:    21 GAKNVNVSHVIHDLSFGPKYPGIHNPLDGTVRMLHDTSGTFKYYIKIVPTEYRYISKDVL 80
             G  N+N++H I  LSFG  YPGI NPLD T       S  F+Y++K+VPT Y  +  +VL
Sbjct:   236 GLDNINMTHYIRHLSFGEDYPGIVNPLDHTNVTAPQASMMFQYFVKVVPTVYMKVDGEVL 295

Query:    81 PTNQFSVTEYFSTFNEF--DRTWPAVYFLYDLSPITVTIKEERRSFLHLITRLCAVLGGT 138
              TNQFSVT +    N    D+  P V+ LY+LSP+ V + E+ RSF H +T +CA++GG 
Sbjct:   296 RTNQFSVTRHEKVANGLMGDQGLPGVFVLYELSPMMVKLTEKHRSFTHFLTGVCAIIGGM 355

Query:   139 FALTGMLDRWMYRLLEALTK 158
             F + G++D  +Y    A+ K
Sbjct:   356 FTVAGLIDSLIYHSARAIQK 375

GO:0033116 "endoplasmic reticulum-Golgi intermediate compartment membrane" evidence=IEA

GO:0005794 "Golgi apparatus" evidence=IEA

GO:0005789 "endoplasmic reticulum membrane" evidence=IEA

GO:0016192 "vesicle-mediated transport" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

UNIPROTKB|Q9Y282 ERGIC3 "Endoplasmic reticulum-Golgi intermediate compartment protein 3" [Homo sapiens (taxid:9606)]

 Score = 312 (114.9 bits), Expect = 6.4e-28, P = 6.4e-28
 Identities = 61/140 (43%), Positives = 86/140 (61%)

Query:    21 GAKNVNVSHVIHDLSFGPKYPGIHNPLDGTVRMLHDTSGTFKYYIKIVPTEYRYISKDVL 80
             G  N+N++H I  LSFG  YPGI NPLD T       S  F+Y++K+VPT Y  +  +VL
Sbjct:   236 GLDNINMTHYIQHLSFGEDYPGIVNPLDHTNVTAPQASMMFQYFVKVVPTVYMKVDGEVL 295

Query:    81 PTNQFSVTEYFSTFNEF--DRTWPAVYFLYDLSPITVTIKEERRSFLHLITRLCAVLGGT 138
              TNQFSVT +    N    D+  P V+ LY+LSP+ V + E+ RSF H +T +CA++GG 
Sbjct:   296 RTNQFSVTRHEKVANGLLGDQGLPGVFVLYELSPMMVKLTEKHRSFTHFLTGVCAIIGGM 355

Query:   139 FALTGMLDRWMYRLLEALTK 158
             F + G++D  +Y    A+ K
Sbjct:   356 FTVAGLIDSLIYHSARAIQK 375

GO:0016021 "integral to membrane" evidence=IEA

GO:0016192 "vesicle-mediated transport" evidence=IEA

GO:0005789 "endoplasmic reticulum membrane" evidence=IEA

GO:0005794 "Golgi apparatus" evidence=IEA

GO:0033116 "endoplasmic reticulum-Golgi intermediate compartment membrane" evidence=IEA

MGI|MGI:1913616 Ergic3 "ERGIC and golgi 3" [Mus musculus (taxid:10090)]

 Score = 311 (114.5 bits), Expect = 8.2e-28, P = 8.2e-28
 Identities = 61/140 (43%), Positives = 86/140 (61%)

Query:    21 GAKNVNVSHVIHDLSFGPKYPGIHNPLDGTVRMLHDTSGTFKYYIKIVPTEYRYISKDVL 80
             G  N+N++H I  LSFG  YPGI NPLD T       S  F+Y++K+VPT Y  +  +VL
Sbjct:   236 GLDNINMTHYIKHLSFGEDYPGIVNPLDHTNVTAPQASMMFQYFVKVVPTVYMKVDGEVL 295

Query:    81 PTNQFSVTEYFSTFNEF--DRTWPAVYFLYDLSPITVTIKEERRSFLHLITRLCAVLGGT 138
              TNQFSVT +    N    D+  P V+ LY+LSP+ V + E+ RSF H +T +CA++GG 
Sbjct:   296 RTNQFSVTRHEKVANGLLGDQGLPGVFVLYELSPMMVKLTEKHRSFTHFLTGVCAIIGGM 355

Query:   139 FALTGMLDRWMYRLLEALTK 158
             F + G++D  +Y    A+ K
Sbjct:   356 FTVAGLIDSLIYHSARAIQK 375

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0005783 "endoplasmic reticulum" evidence=IEA

GO:0005794 "Golgi apparatus" evidence=IEA

GO:0006810 "transport" evidence=IEA

GO:0008150 "biological_process" evidence=ND

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0016192 "vesicle-mediated transport" evidence=IEA

TAIR|locus:2015056 AT1G22200 "AT1G22200" [Arabidopsis thaliana (taxid:3702)]

 Score = 298 (110.0 bits), Expect = 1.9e-26, P = 1.9e-26
 Identities = 57/137 (41%), Positives = 88/137 (64%)

Query:    24 NVNVSHVIHDLSFGPKYPGIHNPLDGTVRMLHDTSGTFKYYIKIVPTEYRYISKDVLPTN 83
             N N+SH ++ L+FG  +PG+ NPLDG        SG ++Y+IK+VP+ Y  + ++ + +N
Sbjct:   243 NYNISHKVNRLAFGDFFPGVVNPLDGVQWNQGKQSGVYQYFIKVVPSIYTDVHQNTIQSN 302

Query:    84 QFSVTEYFSTFNEFDRTW--PAVYFLYDLSPITVTIKEERRSFLHLITRLCAVLGGTFAL 141
             QFSVTE+F    E  R    P V+F YDLSPI V  +E+   FLH +T +CA++GG F +
Sbjct:   303 QFSVTEHFQNM-EAGRMQSPPGVFFYYDLSPIKVIFEEQHVEFLHFLTNVCAIVGGIFTV 361

Query:   142 TGMLDRWMYRLLEALTK 158
             +G++D ++Y    A+ K
Sbjct:   362 SGIVDSFIYHGQRAIKK 378

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0005783 "endoplasmic reticulum" evidence=IDA

GO:0006626 "protein targeting to mitochondrion" evidence=RCA

GO:0030968 "endoplasmic reticulum unfolded protein response" evidence=RCA

ZFIN|ZDB-GENE-040426-795 ergic3 "ERGIC and golgi 3" [Danio rerio (taxid:7955)]

 Score = 297 (109.6 bits), Expect = 2.5e-26, P = 2.5e-26
 Identities = 60/140 (42%), Positives = 85/140 (60%)

Query:    21 GAKNVNVSHVIHDLSFGPKYPGIHNPLDGTVRMLHDTSGTFKYYIKIVPTEYRYISKDVL 80
             G  N+N++H I  LSFG  YPGI NPLD T       S  ++Y++KIVPT Y     +V+
Sbjct:   236 GLDNINMTHFIKHLSFGKDYPGIVNPLDDTNVAAPQASMMYQYFVKIVPTIYVKGDGEVV 295

Query:    81 PTNQFSVTEYFSTFNEF--DRTWPAVYFLYDLSPITVTIKEERRSFLHLITRLCAVLGGT 138
              TNQFSVT +    N    D+  P V+ LY+LSP+ V   E++RSF H +T +CA++GG 
Sbjct:   296 KTNQFSVTRHEKIANGLIGDQGLPGVFVLYELSPMMVKFTEKQRSFTHFLTGVCAIIGGV 355

Query:   139 FALTGMLDRWMYRLLEALTK 158
             F + G++D  +Y    A+ K
Sbjct:   356 FTVAGLIDSLIYHSARAIQK 375

GO:0003674 "molecular_function" evidence=ND

GO:0005783 "endoplasmic reticulum" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0005794 "Golgi apparatus" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0016192 "vesicle-mediated transport" evidence=IEA

GO:0006810 "transport" evidence=IEA

GO:0005789 "endoplasmic reticulum membrane" evidence=IEA

GO:0033116 "endoplasmic reticulum-Golgi intermediate compartment membrane" evidence=IEA

TAIR|locus:2034330 AT1G36050 "AT1G36050" [Arabidopsis thaliana (taxid:3702)]

 Score = 293 (108.2 bits), Expect = 1.8e-25, P = 1.8e-25
 Identities = 58/135 (42%), Positives = 88/135 (65%)

Query:    26 NVSHVIHDLSFGPKYPGIHNPLDGTVRMLHDT-SGTFKYYIKIVPTEYRYISKDVLPTNQ 84
             N+SH I+ L++G  +PG+ NPLD  V    DT +  ++Y+IK+VPT Y  I    + +NQ
Sbjct:   245 NISHKINRLTYGDYFPGVVNPLD-KVEWSQDTPNAMYQYFIKVVPTVYTDIRGHTIQSNQ 303

Query:    85 FSVTEYFSTFNEFD-RTWPAVYFLYDLSPITVTIKEERRSFLHLITRLCAVLGGTFALTG 143
             FSVTE+  +      ++ P V+F YDLSPI VT  EE  SFLH +T +CA++GG F ++G
Sbjct:   304 FSVTEHVKSSEAGQLQSLPGVFFFYDLSPIKVTFTEEHISFLHFLTNVCAIVGGVFTVSG 363

Query:   144 MLDRWMYRLLEALTK 158
             ++D ++Y   +A+ K
Sbjct:   364 IIDAFIYHGQKAIKK 378

GO:0003674 "molecular_function" evidence=ND

GO:0005774 "vacuolar membrane" evidence=IDA

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0005783 "endoplasmic reticulum" evidence=IDA

DICTYBASE|DDB_G0292002 ergic3 "endoplasmic reticulum-golgi intermediate compartment protein 3" [Dictyostelium discoideum (taxid:44689)]

 Score = 277 (102.6 bits), Expect = 3.3e-24, P = 3.3e-24
 Identities = 54/136 (39%), Positives = 83/136 (61%)

Query:    26 NVSHVIHDLSFGPKYPGIHNPLDGTVRMLHDTSGTFKYYIKIVPTEYRYISKDVLPTNQF 85
             NVSH I+ LSFG  +PGI NPLD   +      G F+Y++K+VPT Y  ++ + + TNQ+
Sbjct:   240 NVSHTINRLSFGNDFPGIKNPLDDVTKTEMVGVGMFQYFVKVVPTIYEGLNGNRIATNQY 299

Query:    86 SVTEYFSTF---NEFDRTWPAVYFLYDLSPITVTIKEERRSFLHLITRLCAVLGGTFALT 142
             SVTE++       E     P ++F+YDLSPI + + E  +SF   +T +CA++GG F + 
Sbjct:   300 SVTEHYRLLAKKGEEPSGLPGLFFMYDLSPIMMKVSERGKSFASFLTNVCAIIGGVFTVF 359

Query:   143 GMLDRWMYRLLEALTK 158
             G+ D ++Y   + L K
Sbjct:   360 GIFDSFIYYSTKNLQK 375

GO:0003674 "molecular_function" evidence=ND

GO:0016192 "vesicle-mediated transport" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0006810 "transport" evidence=IEA

GO:0005794 "Golgi apparatus" evidence=IEA

GO:0005783 "endoplasmic reticulum" evidence=IEA

GO:0033116 "endoplasmic reticulum-Golgi intermediate compartment membrane" evidence=IEA

GO:0005789 "endoplasmic reticulum membrane" evidence=IEA

GO:0044351 "macropinocytosis" evidence=RCA

FB|FBgn0036489 CG7011 [Drosophila melanogaster (taxid:7227)]

 Score = 245 (91.3 bits), Expect = 9.7e-21, P = 9.7e-21
 Identities = 57/140 (40%), Positives = 78/140 (55%)

Query:    24 NVNVSHVIHDLSFGPK--YPGIHNPLDGT-VRMLHDTSGTFKYYIKIVPTEYRYISKDVL 80
             NV +SH I+ LSFG K  +   H PLDG  V +    S  F YY+KIVPT Y   + D  
Sbjct:   227 NVKLSHTINHLSFGEKIEFAKTH-PLDGLRVDVAETKSEMFNYYLKIVPTLYMRGNSDGE 285

Query:    81 P--TNQFSVTEYFSTFNEFDRTWPAVYFLYDLSPITVTIKEERRSFLHLITRLCAVLGGT 138
             P  TNQFSVT Y    ++ +R  P ++F Y+LSP+ V   E   SF H  T  C+++GG 
Sbjct:   286 PIYTNQFSVTRYRKDLSDRERGMPGIFFSYELSPLMVKYAERHSSFGHFATNCCSIIGGV 345

Query:   139 FALTGMLDRWMYRLLEALTK 158
             F + G+L   +    EA+ +
Sbjct:   346 FTVAGILAVLLNNSWEAIQR 365

GO:0030134 "ER to Golgi transport vesicle" evidence=ISS

CGD|CAL0003347 orf19.5941 [Candida albicans (taxid:5476)]

 Score = 234 (87.4 bits), Expect = 1.2e-19, P = 1.2e-19
 Identities = 51/136 (37%), Positives = 74/136 (54%)

Query:    23 KNVNVSHVIHDLSFGPKYPGIHNPLDGTVRMLHDTSGTFKYYIKIVPTEYRYISKDVLPT 82
             +++N SHVI + SFG  YP ++NPLD T ++  +   T+ YY K+VPT Y  +  ++  T
Sbjct:   188 ESLNFSHVIQEFSFGEFYPYLNNPLDATGKVTEERLQTYMYYAKVVPTLYEQLGLEI-DT 246

Query:    83 NQFSVTEYFSTFNEFDRTW-----PAVYFLYDLSPITVTIKEERRSFLHLITRLCAVLGG 137
             NQ+S+TE          T      P +YFLYD  PI + I+E+R  F   I +L  + GG
Sbjct:   247 NQYSLTENQHVIKVDQSTHRPDGIPGIYFLYDFEPIKLVIREKRIPFFQFIAKLATIGGG 306

Query:   138 TFALTGMLDRWMYRLL 153
                  G L R   +LL
Sbjct:   307 LLIAAGYLFRLYEKLL 322

GO:0003674 "molecular_function" evidence=ND

GO:0030134 "ER to Golgi transport vesicle" evidence=IEA

GO:0030173 "integral to Golgi membrane" evidence=IEA

GO:0030176 "integral to endoplasmic reticulum membrane" evidence=IEA

GO:0006888 "ER to Golgi vesicle-mediated transport" evidence=IEA

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Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

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Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	166
pfam07970	222	pfam07970, COPIIcoated_ERV, Endoplasmic reticulum	2e-45

>gnl|CDD|219673 pfam07970, COPIIcoated_ERV, Endoplasmic reticulum vesicle transporter

 Score =  147 bits (374), Expect = 2e-45
 Identities = 52/127 (40%), Positives = 76/127 (59%), Gaps = 4/127 (3%)

Query: 24  NVNVSHVIHDLSFGPKYP-GIHNPLDGT--VRMLHDTSGTFKYYIKIVPTEYRYISKDVL 80
            +N SH I+ LSFG ++P G+ NPLDGT            + Y++K+VPT Y  ++  ++
Sbjct: 96  KLNFSHTINHLSFGEEFPGGVTNPLDGTTKFVQTDKGYHMYSYFLKVVPTRYESLNGLIV 155

Query: 81  PTNQFSVTEYFSTFNE-FDRTWPAVYFLYDLSPITVTIKEERRSFLHLITRLCAVLGGTF 139
            TNQ+SVT +            P V+F YD SPI V   E+R+SF H +T LCA++GG F
Sbjct: 156 ETNQYSVTSHDRPVTGGSRGGVPGVFFNYDFSPIKVINTEDRQSFSHFLTNLCAIIGGVF 215

Query: 140 ALTGMLD 146
           A+ G++D
Sbjct: 216 AVAGLID 222

This family is conserved from plants and fungi to humans. Erv46 works in close conjunction with Erv41 and together they form a complex which cycles between the endoplasmic reticulum and Golgi complex. Erv46-41 interacts strongly with the endoplasmic reticulum glucosidase II. Mammalian glucosidase II comprises a catalytic alpha-subunit and a 58 kDa beta subunit, which is required for ER localisation. All proteins identified biochemically as Erv41p-Erv46p interactors are localised to the early secretory pathway and are involved in protein maturation and processing in the ER and/or sorting into COPII vesicles for transport to the Golgi. Length = 222

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	166
KOG2667	379	consensus COPII vesicle protein [Intracellular tra	100.0
PF07970	222	COPIIcoated_ERV: Endoplasmic reticulum vesicle tra	100.0

>KOG2667 consensus COPII vesicle protein [Intracellular trafficking, secretion, and vesicular transport]

Probab=100.00  E-value=1.9e-48  Score=338.87  Aligned_cols=143  Identities=45%  Similarity=0.809  Sum_probs=135.2

Q ss_pred             CcCcccEEeeEeeeCCCCCCCCCCCCCceeeecCCceeEEEEEEEEEEEEEecCCceeeeeeeEEEEEEEeecC-CC-CC
Q 041965           23 KNVNVSHVIHDLSFGPKYPGIHNPLDGTVRMLHDTSGTFKYYIKIVPTEYRYISKDVLPTNQFSVTEYFSTFNE-FD-RT  100 (166)
Q Consensus        23 ~~~N~SH~I~~lsFG~~~p~~~~PLdg~~~i~~~~~~~~~YflkvVPT~y~~~~~~~~~t~qYSvt~~~~~~~~-~~-~~  100 (166)
                      +++||||+|||||||+++|+..|||||+..++.++..+|+||+|||||.|++..+.++.|||||||++.+.... .+ .+
T Consensus       234 ~~~n~SH~InhLSFG~~~p~~~nPLdG~~~~~~~~~~~~~Yf~KvVPT~y~~~~~~~~~T~QysVt~~~~~~~~~~~~~~  313 (379)
T KOG2667|consen  234 DNLNFSHRINHLSFGEYIPGIVNPLDGTNFIANEHLTTFQYFLKVVPTVYKYKSGRVIDTNQYSVTEYEYVLHSHRAKSG  313 (379)
T ss_pred             ccCCceEEEeeeccCCCCcccccCCCCccccccCCccceeeEEEEcceEEEeecCceecceeeeeeeeEEeccccccccC
Confidence            57999999999999999999999999998888888999999999999999988999999999999999888862 33 38


Q ss_pred             cceEEEEEeccceEEEEEeeeccHHHHHHHHhhhhcceeehhhhhHHHHHHHHHHHcCCcccCCC
Q 041965          101 WPAVYFLYDLSPITVTIKEERRSFLHLITRLCAVLGGTFALTGMLDRWMYRLLEALTKPSARSVL  165 (166)
Q Consensus       101 ~PgI~F~Yd~SPi~V~~~~~r~s~~~flt~lcAIiGGvftv~giiD~~~~~~~~~~~k~~~~~~~  165 (166)
                      +|||||+||+|||+|+++|+|+||++|||||||||||+|||+||||++++++.+.+++|++.+++
T Consensus       314 ~PGifF~YelSPl~V~v~E~r~sf~~Flt~lCAIiGGvftvagiid~~~~~~~~~i~~k~~~gk~  378 (379)
T KOG2667|consen  314 IPGIFFKYELSPLMVKVTEERQSFSHFLTRLCAIIGGVFTVAGILDSLLYHILELIKGKIALGKY  378 (379)
T ss_pred             CCeEEEEEecCceEEEEEeccccHHHHHHHHHHHhcceeehHHHHHHHHHHHHHHHhcchhhhcc
Confidence            99999999999999999999999999999999999999999999999999999999999988876

>PF07970 COPIIcoated_ERV: Endoplasmic reticulum vesicle transporter ; InterPro: IPR012936 This domain occurs in many hypothetical proteins, and also two partially characterised proteins

Probab=100.00  E-value=1.7e-45  Score=301.81  Aligned_cols=123  Identities=45%  Similarity=0.836  Sum_probs=115.5

Q ss_pred             cCcccEEeeEeeeCCCCCCCCCCCCCceee--ecCCceeEEEEEEEEEEEEEecCCceeeeeeeEEEEEEEeecCCC-CC
Q 041965           24 NVNVSHVIHDLSFGPKYPGIHNPLDGTVRM--LHDTSGTFKYYIKIVPTEYRYISKDVLPTNQFSVTEYFSTFNEFD-RT  100 (166)
Q Consensus        24 ~~N~SH~I~~lsFG~~~p~~~~PLdg~~~i--~~~~~~~~~YflkvVPT~y~~~~~~~~~t~qYSvt~~~~~~~~~~-~~  100 (166)
                      .+|+||+|||||||+++|+..|||||+.++  .++...+++||||||||.|...++..++|||||+|++.+.+.... .+
T Consensus        97 ~~N~SH~I~~lsFG~~~~~~~~PLdg~~~~~~~~~~~~~~~YflkvVPT~y~~~~~~~~~t~qYsvt~~~~~~~~~~~~~  176 (222)
T PF07970_consen   97 KFNFSHTINHLSFGEEIPGIVNPLDGTQKIVQTDNGNYMYQYFLKVVPTTYEDLDGFSIETYQYSVTEHSRPLNGGSSGG  176 (222)
T ss_pred             CCCCCeEEEEEEeccccccccccccCccccccCCCCceeEEEEEEEeeeeeEeccccccccccccceeeeeeccCCCCCC
Confidence            799999999999999999999999999884  466789999999999999999887767999999999999987654 78


Q ss_pred             cceEEEEEeccceEEEEEeeeccHHHHHHHHhhhhcceeehhhhhH
Q 041965          101 WPAVYFLYDLSPITVTIKEERRSFLHLITRLCAVLGGTFALTGMLD  146 (166)
Q Consensus       101 ~PgI~F~Yd~SPi~V~~~~~r~s~~~flt~lcAIiGGvftv~giiD  146 (166)
                      +|||||+||||||+|+++++|+||+||||+||||||||||++||||
T Consensus       177 ~PGI~F~Yd~SPi~v~~~~~r~s~~~flt~lcaIiGGvftv~gliD  222 (222)
T PF07970_consen  177 LPGIFFKYDFSPIMVVITEDRKSFLHFLTRLCAIIGGVFTVAGLID  222 (222)
T ss_pred             CceEEEEEeceeEEEEEEEecCCHHHHHHHHHHHhchHheEEEecC
Confidence            9999999999999999999999999999999999999999999998

One of these proteins, PTX1 Q96RQ1 from SWISSPROT, is a homeodomain-containing transcription factor involved in regulating all pituitary hormone genes []. This protein is down regulated in prostate carcinoma []. The other protein, ERGIC-32 Q969X5 from SWISSPROT, is involved in protein transport from the ER to the Golgi [].

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00