Citrus Sinensis ID: 041969

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------21
MVRALEVQVLTRENIKPLYPTPHHLRNFKLSLMDQITFPIYVCTIFLYKADGSVKSYQISQRLKSSLSKTLTKFYPFAGRLKDDFSIVCNDQGAEYVEALANGFLSEYLQKPDQKLLRDFHPFKYAESSAAGIGDPMLRIQATFFKCGGLAIAVCTHHKLIDGSSVGTFVNSWTATARADSQSSSISNINKQVIPAFVAATFFPASESF
cccccEEEEEEEEEEEcccccccccccccccccccccccccEEEEEEEccccccccccHHHHHHHHHHHccccccccccEEccccEEEEccccEEEEEEEEcccHHHHccccccHHHHccccccccccccccccccEEEEEEEEEcccEEEEEcccccccccHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccc
ccEEEEEEEcccEcccccccccccccEccccccccccccEEEEEEEEEccccccccccHHHHHHHHHHHHHHHHcccHHHHcccEEEEccccEEEEEEEccccEHHHHccccccccHHHcccccccccccccccccEEEEEEEEEEcccEEEEEEEcccHccHHHHHHHHHHHHHHHcccccccccccccHHHcccccccccccccccc
MVRALEVQVLtrenikplyptphhlrNFKLSLMDQITFPIYVCTIFLYKadgsvksyqISQRLKSSLSKTLtkfypfagrlkddfsivCNDQGAEYVEALANGFLseylqkpdqkllrdfhpfkyaessaagigdpmLRIQATFFKCGGLAIAVCThhklidgssvgtfvnswtataradsqsssiSNINKQVIPAFvaatffpasesf
mvralevqvltrenikplyptphHLRNFKLSLMDQITFPIYVCTIFLYKADGSVKSYQISQRLKSSLSKTLTKFYPFAGRLKDDFSIVCNDQGAEYVEALANGFLSEYLQKPDQKLLRDFHPFKYAESSAAGIGDPMLRIQATFFKCGGLAIAVCTHHKLIDGSSVGTFVNSWTATARADSQSSSISNINKQVIPAFVAATFFPASESF
MVRALEVQVLTRENIKPLYPTPHHLRNFKLSLMDQITFPIYVCTIFLYKADGSVKSYQISQRLKSSLSKTLTKFYPFAGRLKDDFSIVCNDQGAEYVEALANGFLSEYLQKPDQKLLRDFHPFKYAESSAAGIGDPMLRIQATFFKCGGLAIAVCTHHKLIDGSSVGTFVNSWTATARADsqsssisninkqVIPAFVAATFFPASESF
*****EVQVLTRENIKPLYPTPHHLRNFKLSLMDQITFPIYVCTIFLYKADGSVKSYQISQRLKSSLSKTLTKFYPFAGRLKDDFSIVCNDQGAEYVEALANGFLSEYLQKPDQKLLRDFHPFKYAESSAAGIGDPMLRIQATFFKCGGLAIAVCTHHKLIDGSSVGTFVNSWTATA**********NINKQVIPAFVAATFF******
***ALEV*VLTRENIKPLYPTPHHLRNFKLSLMDQITFPIYVCTIFLYKADGS*****ISQRLKSSLSKTLTKFYPFAGRLKDDFSIVCNDQGAEYVEALANGFLSEYLQKPDQKLLRDFHPFKYAESSAAGIGDPMLRIQATFFKCGGLAIAVCTHHKLIDGSSVGTFVNSWTATARADSQSSSISNINKQVIPAFVAATFFP*****
MVRALEVQVLTRENIKPLYPTPHHLRNFKLSLMDQITFPIYVCTIFLYKADGSVKSYQISQRLKSSLSKTLTKFYPFAGRLKDDFSIVCNDQGAEYVEALANGFLSEYLQKPDQKLLRDFHPFKYAESSAAGIGDPMLRIQATFFKCGGLAIAVCTHHKLIDGSSVGTFVNSWTA**********ISNINKQVIPAFVAATFFPASESF
*VRALEVQVLTRENIKPLYPTPHHLRNFKLSLMDQITFPIYVCTIFLYKADGSVKSYQISQRLKSSLSKTLTKFYPFAGRLKDDFSIVCNDQGAEYVEALANGFLSEYLQKPDQKLLRDFHPFKYAESSAAGIGDPMLRIQATFFKCGGLAIAVCTHHKLIDGSSVGTFVNSWTATARADSQSSSISNINKQVIPAFVAATFFP*****
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MVRALEVQVLTRENIKPLYPTPHHLRNFKLSLMDQITFPIYVCTIFLYKADGSVKSYQISQRLKSSLSKTLTKFYPFAGRLKDDFSIVCNDQGAEYVEALANGFLSEYLQKPDQKLLRDFHPFKYAESSAAGIGDPMLRIQATFFKCGGLAIAVCTHHKLIDGSSVGTFVNSWTATARADSQSSSISNINKQVIPAFVAATFFPASESF
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query209 2.2.26 [Sep-21-2011]
Q94FT4 474 Salutaridinol 7-O-acetylt N/A no 0.942 0.415 0.377 2e-32
Q9FI40 443 BAHD acyltransferase At5g no no 0.827 0.390 0.441 4e-29
Q70PR7 421 Vinorine synthase OS=Rauv N/A no 0.899 0.446 0.371 3e-27
Q9ZTK5 439 Deacetylvindoline O-acety N/A no 0.937 0.446 0.312 9e-24
O64470 451 Spermidine hydroxycinnamo no no 0.679 0.314 0.313 2e-16
Q94CD1 457 Omega-hydroxypalmitate O- no no 0.684 0.312 0.339 3e-15
O24645 445 Anthranilate N-benzoyltra N/A no 0.813 0.382 0.321 3e-15
Q8GSM7 435 Shikimate O-hydroxycinnam N/A no 0.808 0.388 0.311 4e-15
Q9FI78 433 Shikimate O-hydroxycinnam no no 0.808 0.390 0.305 6e-15
O23917 446 Anthranilate N-benzoyltra N/A no 0.813 0.381 0.321 7e-15
>sp|Q94FT4|SALAT_PAPSO Salutaridinol 7-O-acetyltransferase OS=Papaver somniferum GN=SALAT PE=1 SV=1 Back     alignment and function desciption
 Score =  138 bits (348), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 79/209 (37%), Positives = 117/209 (55%), Gaps = 12/209 (5%)

Query: 7   VQVLTRENIKPLYPTPHHLRNFKLSLMDQITFPIY--VCTIFLYKAD-----GSVKSYQI 59
           V+V+++E IKP  PTP  L+NF LSL+DQ  FP+Y  V  I  Y A      GS   +  
Sbjct: 9   VEVISKETIKPTTPTPSQLKNFNLSLLDQ-CFPLYYYVPIILFYPATAANSTGSSNHHDD 67

Query: 60  SQRLKSSLSKTLTKFYPFAGRLKDDFSIVCNDQGAEYVEALANGFLSEYLQKPDQKLLRD 119
              LKSSLSKTL  FYP AGR+ D+  + C+DQG  + +    G + E++ +PD  L + 
Sbjct: 68  LDLLKSSLSKTLVHFYPMAGRMIDNILVDCHDQGINFYKVKIRGKMCEFMSQPDVPLSQ- 126

Query: 120 FHPFKYAESSAAGIGDPMLRIQATFFKCGGLAIAVCTHHKLIDGSSVGTFVNSWTATARA 179
             P +    SA+   + ++ +Q   F CGG AI     HK+ D +++ TF+ SW +T + 
Sbjct: 127 LLPSEVV--SASVPKEALVIVQVNMFDCGGTAICSSVSHKIADAATMSTFIRSWASTTKT 184

Query: 180 DSQSSSISNINKQ-VIPAFVAATFFPASE 207
                S + +  Q +IP+F +A+ FP SE
Sbjct: 185 SRSGGSTAAVTDQKLIPSFDSASLFPPSE 213
Catalyzes the conversion of the phenanthrene alkaloid salutaridinol to salutaridinol-7-O-acetate, the immediate precursor of thebaine along the morphine biosynthetic pathway. Conversion of 7-O-acetylsalutaridinol into thebaine is spontaneous.
Papaver somniferum (taxid: 3469)
EC: 2EC: .EC: 3EC: .EC: 1EC: .EC: 1EC: 5EC: 0
>sp|Q9FI40|BAHD1_ARATH BAHD acyltransferase At5g47980 OS=Arabidopsis thaliana GN=BAHD1 PE=2 SV=1 Back     alignment and function description
>sp|Q70PR7|VINSY_RAUSE Vinorine synthase OS=Rauvolfia serpentina GN=ACT PE=1 SV=2 Back     alignment and function description
>sp|Q9ZTK5|DAT_CATRO Deacetylvindoline O-acetyltransferase OS=Catharanthus roseus GN=DAT PE=1 SV=1 Back     alignment and function description
>sp|O64470|SHT_ARATH Spermidine hydroxycinnamoyl transferase OS=Arabidopsis thaliana GN=SHT PE=1 SV=1 Back     alignment and function description
>sp|Q94CD1|HHT1_ARATH Omega-hydroxypalmitate O-feruloyl transferase OS=Arabidopsis thaliana GN=HHT1 PE=1 SV=1 Back     alignment and function description
>sp|O24645|HCBT1_DIACA Anthranilate N-benzoyltransferase protein 1 OS=Dianthus caryophyllus GN=HCBT1 PE=1 SV=1 Back     alignment and function description
>sp|Q8GSM7|HST_TOBAC Shikimate O-hydroxycinnamoyltransferase OS=Nicotiana tabacum GN=HST PE=1 SV=1 Back     alignment and function description
>sp|Q9FI78|HST_ARATH Shikimate O-hydroxycinnamoyltransferase OS=Arabidopsis thaliana GN=HST PE=2 SV=1 Back     alignment and function description
>sp|O23917|HCBT2_DIACA Anthranilate N-benzoyltransferase protein 2 OS=Dianthus caryophyllus GN=HCBT2 PE=1 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query209
224104303 346 predicted protein [Populus trichocarpa] 0.913 0.552 0.443 3e-41
225425912 431 PREDICTED: vinorine synthase [Vitis vini 0.904 0.438 0.443 4e-39
224061883 449 predicted protein [Populus trichocarpa] 0.909 0.423 0.387 6e-39
224107651 441 predicted protein [Populus trichocarpa] 0.933 0.442 0.425 8e-39
255547900 441 3'-N-debenzoyl-2'-deoxytaxol N-benzoyltr 0.928 0.439 0.419 9e-39
224086030 435 predicted protein [Populus trichocarpa] 0.928 0.445 0.379 2e-38
255539202295 Salutaridinol 7-O-acetyltransferase, put 0.918 0.650 0.408 3e-38
449469643 434 PREDICTED: BAHD acyltransferase At5g4798 0.928 0.447 0.417 3e-38
449515991 434 PREDICTED: BAHD acyltransferase At5g4798 0.928 0.447 0.417 3e-38
255539124 440 Anthranilate N-benzoyltransferase protei 0.904 0.429 0.418 1e-37
>gi|224104303|ref|XP_002333962.1| predicted protein [Populus trichocarpa] gi|222839277|gb|EEE77614.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
 Score =  174 bits (440), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 91/205 (44%), Positives = 126/205 (61%), Gaps = 14/205 (6%)

Query: 5   LEVQVLTRENIKPLYPTPHHLRNFKLSLMDQITFPIYVCTIFLYKADGS-----VKSYQI 59
           L ++++ RE IKP  PTP HLR+ KLSL+DQ    +++  +  Y  +G+      K+ + 
Sbjct: 5   LRIEIMQRETIKPSSPTPLHLRSLKLSLLDQFMPVVHIPLLLFYPRNGNDTDHLAKATER 64

Query: 60  SQRLKSSLSKTLTKFYPFAGRLKDDFSIVCNDQGAEYVEALANGFLSEYLQKPDQKLLRD 119
           S  LK+SLS+ LT FYPFAGRLKD+ SI C+D GAEY+EA  +  LS+ L+KPD ++L+ 
Sbjct: 65  SLLLKTSLSEALTHFYPFAGRLKDNSSIECDDHGAEYIEARIHCILSDILKKPDTEVLKQ 124

Query: 120 FHPFKYAESSAAGIGDPMLRIQATFFKCGGLAIAVCTHHKLIDGSSVGTFVNSWTATARA 179
             P   +E  AA   D  L +QA+FF CGGLAI +   HK+ D ++V TF+  W ATAR 
Sbjct: 125 LLPAALSE--AATARDSQLLVQASFFDCGGLAIGMNLSHKVADAATVTTFIKCWAATARR 182

Query: 180 DSQSSSISNINKQVIPAFVAATFFP 204
            S    IS       P F+ A+ FP
Sbjct: 183 SSTEVVIS-------PVFMGASIFP 200

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|225425912|ref|XP_002267341.1| PREDICTED: vinorine synthase [Vitis vinifera] gi|297738335|emb|CBI27536.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|224061883|ref|XP_002300646.1| predicted protein [Populus trichocarpa] gi|222842372|gb|EEE79919.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|224107651|ref|XP_002314550.1| predicted protein [Populus trichocarpa] gi|222863590|gb|EEF00721.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|255547900|ref|XP_002515007.1| 3'-N-debenzoyl-2'-deoxytaxol N-benzoyltransferase, putative [Ricinus communis] gi|223546058|gb|EEF47561.1| 3'-N-debenzoyl-2'-deoxytaxol N-benzoyltransferase, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|224086030|ref|XP_002307785.1| predicted protein [Populus trichocarpa] gi|222857234|gb|EEE94781.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|255539202|ref|XP_002510666.1| Salutaridinol 7-O-acetyltransferase, putative [Ricinus communis] gi|223551367|gb|EEF52853.1| Salutaridinol 7-O-acetyltransferase, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|449469643|ref|XP_004152528.1| PREDICTED: BAHD acyltransferase At5g47980-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|449515991|ref|XP_004165031.1| PREDICTED: BAHD acyltransferase At5g47980-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|255539124|ref|XP_002510627.1| Anthranilate N-benzoyltransferase protein, putative [Ricinus communis] gi|223551328|gb|EEF52814.1| Anthranilate N-benzoyltransferase protein, putative [Ricinus communis] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query209
TAIR|locus:2102936 443 AT3G30280 [Arabidopsis thalian 0.956 0.451 0.388 4.4e-36
TAIR|locus:2130065 446 AT4G15390 [Arabidopsis thalian 0.947 0.443 0.375 6.5e-35
TAIR|locus:2092090 442 AT3G26040 [Arabidopsis thalian 0.803 0.380 0.444 4.6e-34
TAIR|locus:2024061 436 AT1G24420 [Arabidopsis thalian 0.889 0.426 0.386 2.3e-30
TAIR|locus:2178667 428 AT5G23970 [Arabidopsis thalian 0.880 0.429 0.393 2.1e-29
TAIR|locus:2152783 426 AT5G47950 [Arabidopsis thalian 0.818 0.401 0.384 3.1e-28
TAIR|locus:2152763 443 AT5G47980 [Arabidopsis thalian 0.818 0.386 0.441 5e-28
TAIR|locus:2024036 435 AT1G24430 [Arabidopsis thalian 0.875 0.420 0.368 8.2e-28
TAIR|locus:2130075 435 BIA1 "BRASSINOSTEROID INACTIVA 0.933 0.448 0.355 7.5e-24
UNIPROTKB|A0PDV5 430 cbhct1 "Hydroxycinnamoyl trans 0.784 0.381 0.335 2.3e-16
TAIR|locus:2102936 AT3G30280 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 389 (142.0 bits), Expect = 4.4e-36, P = 4.4e-36
 Identities = 82/211 (38%), Positives = 122/211 (57%)

Query:     2 VRALEVQVLTRENIKPLYPTPHHLRNFKLSLMDQITFPIYVCTIFLYKADGSVKSYQISQ 61
             +  ++V+ + +E IKP   TP+ L+  +LS+ D I  P+Y      Y  D  +   Q S 
Sbjct:     1 METMKVETIAKEIIKPSSTTPNDLQTLQLSIYDHILPPVYTVAFLFYTKDDLISPEQSSH 60

Query:    62 RLKSSLSKTLTKFYPFAGRLKDDFSIVCNDQGAEYVEALANGF-LSEYLQKPDQKLLRDF 120
             +LK+SL++TLTKFYP AGR+K   +I CND+GA +V+A  N + LS++L+ PD K L+  
Sbjct:    61 KLKTSLAETLTKFYPLAGRIKG-VTIDCNDEGAVFVDARVNNYPLSDFLRSPDFKTLQQL 119

Query:   121 HPFKYAESS-AAGIGDPMLRIQATFFKCGGLAIAVCTHHKLIDGSSVGTFVNSWTATARA 179
              P    +    A    P+L ++AT+F CGG+AI +C  HK+ D +S+ TF+ SW A AR 
Sbjct:   120 LPLDVIDDPYEAATTWPLLLVKATYFPCGGMAIGLCITHKIADATSISTFIQSWAAMARG 179

Query:   180 DXXXXXXXXXXXXVIPAFVAATFFP-ASESF 209
             +              P F AA F+P A+E F
Sbjct:   180 EAGDIVAD-------PVFAAANFYPPANELF 203
GO:0005737 "cytoplasm" evidence=ISM
GO:0016740 "transferase activity" evidence=ISS
GO:0016747 "transferase activity, transferring acyl groups other than amino-acyl groups" evidence=IEA
TAIR|locus:2130065 AT4G15390 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2092090 AT3G26040 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2024061 AT1G24420 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2178667 AT5G23970 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2152783 AT5G47950 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2152763 AT5G47980 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2024036 AT1G24430 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2130075 BIA1 "BRASSINOSTEROID INACTIVATOR1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|A0PDV5 cbhct1 "Hydroxycinnamoyl transferase" [Solenostemon scutellarioides (taxid:4142)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer2.3.1LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query209
PLN00140 444 PLN00140, PLN00140, alcohol acetyltransferase fami 2e-50
pfam02458 432 pfam02458, Transferase, Transferase family 6e-44
PLN02481 436 PLN02481, PLN02481, Omega-hydroxypalmitate O-ferul 6e-25
PLN03157 447 PLN03157, PLN03157, spermidine hydroxycinnamoyl tr 1e-19
PLN02663 431 PLN02663, PLN02663, hydroxycinnamoyl-CoA:shikimate 1e-18
>gnl|CDD|165708 PLN00140, PLN00140, alcohol acetyltransferase family protein; Provisional Back     alignment and domain information 
 Score =  168 bits (427), Expect = 2e-50
 Identities = 85/211 (40%), Positives = 122/211 (57%), Gaps = 17/211 (8%)

Query: 5   LEVQVLTRENIKPLYPTPHHLRNFKLSLMDQITFPIYVCTIFLYKA--DGSVKSYQISQR 62
           +EV +++RE IKP  P+ HHL+ FKLSL+DQ+T   Y+  IF Y    + + K  QIS +
Sbjct: 1   MEVSIISRELIKPSSPSIHHLKPFKLSLLDQLTPTTYIPMIFFYPTNNNQNFKGLQISIQ 60

Query: 63  LKSSLSKTLTKFYPFAGRLKDDFSIVCNDQGAEYVEALANGFLSEYLQKPDQKLLRDF-- 120
           LK SLS+TL+ FYPF+GR+KD+  I   ++G  + E    G LS++L+ P  +LL  F  
Sbjct: 61  LKRSLSETLSTFYPFSGRVKDNLIIDNYEEGVPFFETRVKGSLSDFLKHPQLELLNKFLP 120

Query: 121 -HPFKYAESSAAGIGDPMLRIQATFFKCGGLAIAVCTHHKLIDGSSVGTFVNSWTATARA 179
             PF Y ES    I  P + IQ   F CGG+A+ +C  HK+ID ++   F++SW A  R 
Sbjct: 121 CQPFSY-ESDPEAI--PQVAIQVNTFDCGGIALGLCFSHKIIDAATASAFLDSWAANTRG 177

Query: 180 DSQSSSISNINKQVIPA-FVAATFFPASESF 209
                      + + P  F A++FFP   SF
Sbjct: 178 HYS--------EVINPDLFEASSFFPPLNSF 200

Length = 444
>gnl|CDD|217048 pfam02458, Transferase, Transferase family Back     alignment and domain information
>gnl|CDD|215266 PLN02481, PLN02481, Omega-hydroxypalmitate O-feruloyl transferase Back     alignment and domain information
>gnl|CDD|178702 PLN03157, PLN03157, spermidine hydroxycinnamoyl transferase; Provisional Back     alignment and domain information
>gnl|CDD|166304 PLN02663, PLN02663, hydroxycinnamoyl-CoA:shikimate/quinate hydroxycinnamoyltransferase Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 209
PLN00140 444 alcohol acetyltransferase family protein; Provisio 100.0
PLN03157 447 spermidine hydroxycinnamoyl transferase; Provision 100.0
PF02458 432 Transferase: Transferase family; InterPro: IPR0034 100.0
PLN02663 431 hydroxycinnamoyl-CoA:shikimate/quinate hydroxycinn 100.0
PLN02481 436 Omega-hydroxypalmitate O-feruloyl transferase 100.0
PRK09294 416 acyltransferase PapA5; Provisional 97.49
PF03007263 WES_acyltransf: Wax ester synthase-like Acyl-CoA a 97.15
PF00668 301 Condensation: Condensation domain; InterPro: IPR00 97.07
TIGR02946 446 acyl_WS_DGAT acyltransferase, WS/DGAT/MGAT. This b 96.94
COG4908 439 Uncharacterized protein containing a NRPS condensa 96.89
PRK10252 1296 entF enterobactin synthase subunit F; Provisional 94.49
PRK12467 3956 peptide synthase; Provisional 94.16
PRK12467 3956 peptide synthase; Provisional 94.14
PRK05691 4334 peptide synthase; Validated 92.93
PRK12316 5163 peptide synthase; Provisional 91.66
PRK05691 4334 peptide synthase; Validated 91.26
PRK12316 5163 peptide synthase; Provisional 90.85
PF07247 480 AATase: Alcohol acetyltransferase; InterPro: IPR01 90.74
>PLN00140 alcohol acetyltransferase family protein; Provisional Back     alignment and domain information 
Probab=100.00  E-value=7.2e-43  Score=313.90  Aligned_cols=194  Identities=40%  Similarity=0.739  Sum_probs=165.5

Q ss_pred             ceEEEEeeeEEecCCCCCCCCccccCCcccccccccceEEEEEEcCCCCCC--chhHHHHHHHHHHHhhccccccCceec
Q 041969            5 LEVQVLTRENIKPLYPTPHHLRNFKLSLMDQITFPIYVCTIFLYKADGSVK--SYQISQRLKSSLSKTLTKFYPFAGRLK   82 (209)
Q Consensus         5 ~~V~v~~~~~V~P~~~~~~~~~~~~LS~lD~~~~~~~i~~~~~f~~~~~~~--~~~~~~~L~~sL~~~L~~~p~laGrl~   82 (209)
                      |+|++++++.|+|+.|++.+...++||+||+.+++.|++.+|||+.+.+.+  ...++++||+||+++|++||||||||+
T Consensus         1 ~~v~~~s~~~V~Ps~ptp~~~~~~~LS~lD~~~~~~~~~~~~fY~~~~~~~~~~~~~~~~Lk~sLs~~L~~fyplAGRl~   80 (444)
T PLN00140          1 MEVSIISRELIKPSSPSIHHLKPFKLSLLDQLTPTTYIPMIFFYPTNNNQNFKGLQISIQLKRSLSETLSTFYPFSGRVK   80 (444)
T ss_pred             CeeEEeccceeccCCCCccccccCCCChHHhcccccccceEEEeeCCCcccccchhHHHHHHHHHHHHHhhhhccCcccc
Confidence            689999999999999988766789999999988899999999999765322  246789999999999999999999999


Q ss_pred             CCeEEEeCCCCceEEEEeeccchhhhcCCCChhhhcCcccCcccc--CCcCCCCCCeeEEEEEEecCCcEEEEeccceec
Q 041969           83 DDFSIVCNDQGAEYVEALANGFLSEYLQKPDQKLLRDFHPFKYAE--SSAAGIGDPMLRIQATFFKCGGLAIAVCTHHKL  160 (209)
Q Consensus        83 ~~~~I~~~~~gv~f~~a~~d~~l~~l~~~p~~~~~~~l~P~~~~~--~~~~~~~~Pll~vQvt~f~cGG~~Lg~~~~H~v  160 (209)
                      .+++|.||++||.|+||+++.+++|+...++...+..|+|.....  .+  ....|++.+|||+|+|||++||+++||++
T Consensus        81 ~~~~i~cn~~Gv~fveA~~~~~l~d~l~~~~~~~~~~l~p~~~~~~~~~--~~~~Pll~vQvT~F~cGG~~lG~~~~H~v  158 (444)
T PLN00140         81 DNLIIDNYEEGVPFFETRVKGSLSDFLKHPQLELLNKFLPCQPFSYESD--PEAIPQVAIQVNTFDCGGIALGLCFSHKI  158 (444)
T ss_pred             CCceeEccCCCceEEEEEecCcHHHhcCCCCHHHHHhhCCCCcccccCC--ccCCceEEEEEEEeccCcEEEEeeeceEc
Confidence            889999999999999999999999997666555567788864211  12  14479999999999999999999999999


Q ss_pred             cchhhHHHHHHHHHHHHhcCCCCccccccCcccCCccccc-ccCCCCCC
Q 041969          161 IDGSSVGTFVNSWTATARADSQSSSISNINKQVIPAFVAA-TFFPASES  208 (209)
Q Consensus       161 ~Dg~g~~~fl~~Wa~~~rg~~~~~~~~~~~~~~~p~~dr~-~~~~~~~~  208 (209)
                      +||.|+.+|+++||++|||..        .....|.|||+ .++||++.
T Consensus       159 ~Dg~s~~~Fl~~WA~~~rg~~--------~~~~~P~~dr~~~~~p~~~~  199 (444)
T PLN00140        159 IDAATASAFLDSWAANTRGHY--------SEVINPDLFEASSFFPPLNS  199 (444)
T ss_pred             ccHHHHHHHHHHHHHHhcCCC--------CCCCCcccccccccCCCCCc
Confidence            999999999999999999872        22346999997 56788754

>PLN03157 spermidine hydroxycinnamoyl transferase; Provisional Back     alignment and domain information
>PF02458 Transferase: Transferase family; InterPro: IPR003480 This family includes a number of transferase enzymes Back     alignment and domain information
>PLN02663 hydroxycinnamoyl-CoA:shikimate/quinate hydroxycinnamoyltransferase Back     alignment and domain information
>PLN02481 Omega-hydroxypalmitate O-feruloyl transferase Back     alignment and domain information
>PRK09294 acyltransferase PapA5; Provisional Back     alignment and domain information
>PF03007 WES_acyltransf: Wax ester synthase-like Acyl-CoA acyltransferase domain; InterPro: IPR004255 This entry represents the N terminus (approximately 170 residues) of a number of hypothetical plant proteins Back     alignment and domain information
>PF00668 Condensation: Condensation domain; InterPro: IPR001242 This domain is found in many multi-domain enzymes which synthesize peptide antibiotics Back     alignment and domain information
>TIGR02946 acyl_WS_DGAT acyltransferase, WS/DGAT/MGAT Back     alignment and domain information
>COG4908 Uncharacterized protein containing a NRPS condensation (elongation) domain [General function prediction only] Back     alignment and domain information
>PRK10252 entF enterobactin synthase subunit F; Provisional Back     alignment and domain information
>PRK12467 peptide synthase; Provisional Back     alignment and domain information
>PRK12467 peptide synthase; Provisional Back     alignment and domain information
>PRK05691 peptide synthase; Validated Back     alignment and domain information
>PRK12316 peptide synthase; Provisional Back     alignment and domain information
>PRK05691 peptide synthase; Validated Back     alignment and domain information
>PRK12316 peptide synthase; Provisional Back     alignment and domain information
>PF07247 AATase: Alcohol acetyltransferase; InterPro: IPR010828 This family contains a number of alcohol acetyltransferase (2 Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query209
2bgh_A 421 Crystal Structure Of Vinorine Synthase Length = 421 5e-28
4g0b_A 436 Structure Of Native Hct From Coffea Canephora Lengt 2e-19
4g2m_A 439 Structure Of A Lys-Hct Mutant From Coffea Canephora 5e-19
4g22_A 439 Structure Of A Lys-Hct Mutant From Coffea Canephora 8e-18
2e1t_A 454 Crystal Structure Of Dendranthema Morifolium Dmat C 4e-06
2e1v_A 454 Crystal Structure Of Dendranthema Morifolium Dmat, 4e-06
2xr7_A 453 Crystal Structure Of Nicotiana Tabacum Malonyltrans 4e-04
>pdb|2BGH|A Chain A, Crystal Structure Of Vinorine Synthase Length = 421 Back     alignment and structure 
Iteration: 1

 Score =  120 bits (302), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 78/210 (37%), Positives = 111/210 (52%), Gaps = 22/210 (10%)
Query: 4   ALEVQVLTRENIKPLYPTPHHLRNFKLSLMDQITFPIYVCTIFLYKA--DGSVKSYQISQ 61
           A +++ ++ E I P  PTP  L+ +K+S +DQ+    ++  I  Y    D ++   Q SQ
Sbjct: 2   APQMEKVSEELILPSSPTPQSLKCYKISHLDQLLLTCHIPFILFYPNPLDSNLDPAQTSQ 61
Query: 62  RLKSSLSKTLTKFYPFAGRLKDDFSIVCNDQGAEYVEALANGFLSEYLQ------KPDQK 115
            LK SLSK LT FYP AGR+  + S+ CND G  +VEA     LS+ +Q      K DQ 
Sbjct: 62  HLKQSLSKVLTHFYPLAGRINVNSSVDCNDSGVPFVEARVQAQLSQAIQNVVELEKLDQY 121
Query: 116 LLRDFHPFKYAESSAAGIGDPMLRIQATFFKCGGLAIAVCTHHKLIDGSSVGTFVNSWTA 175
           L    +P    E +     D  L ++ +FF+CGG AI V   HK+ D  S+ TF+N+WTA
Sbjct: 122 LPSAAYPGGKIEVNE----DVPLAVKISFFECGGTAIGVNLSHKIADVLSLATFLNAWTA 177
Query: 176 TARADXXXXXXXXXXXXVIPAF-VAATFFP 204
           T R +            V+P F +AA  FP
Sbjct: 178 TCRGE---------TEIVLPNFDLAARHFP 198
>pdb|4G0B|A Chain A, Structure Of Native Hct From Coffea Canephora Length = 436 Back     alignment and structure
>pdb|4G2M|A Chain A, Structure Of A Lys-Hct Mutant From Coffea Canephora (Crystal Form 2) Length = 439 Back     alignment and structure
>pdb|4G22|A Chain A, Structure Of A Lys-Hct Mutant From Coffea Canephora (Crystal Form 1) Length = 439 Back     alignment and structure
>pdb|2E1T|A Chain A, Crystal Structure Of Dendranthema Morifolium Dmat Complexed With Malonyl-coa Length = 454 Back     alignment and structure
>pdb|2E1V|A Chain A, Crystal Structure Of Dendranthema Morifolium Dmat, Seleno- Methionine Derivative Length = 454 Back     alignment and structure
>pdb|2XR7|A Chain A, Crystal Structure Of Nicotiana Tabacum Malonyltransferase (Ntmat1) Complexed With Malonyl-Coa Length = 453 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query209
2bgh_A 421 Vinorine synthase; VS, BAHD, acetyltransferase, au 1e-60
4g22_A 439 Hydroxycinnamoyl-COA shikimate/quinate hydroxycinn 1e-57
2xr7_A 453 Malonyltransferase; xenobiotics, naphthols; HET: M 1e-45
2e1v_A 454 Acyl transferase; BAHD superfamily, seleno-methion 1e-43
2rkv_A 451 Trichothecene 3-O-acetyltransferase; BAHD superfam 7e-31
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 9e-07
>2bgh_A Vinorine synthase; VS, BAHD, acetyltransferase, auto-rickshaw, transferase; 2.6A {Rauvolfia serpentina} Length = 421 Back     alignment and structure
 Score =  193 bits (493), Expect = 1e-60
 Identities = 75/211 (35%), Positives = 113/211 (53%), Gaps = 14/211 (6%)

Query: 4   ALEVQVLTRENIKPLYPTPHHLRNFKLSLMDQITFPIYVCTIFLYKA--DGSVKSYQISQ 61
           A +++ ++ E I P  PTP  L+ +K+S +DQ+    ++  I  Y    D ++   Q SQ
Sbjct: 2   APQMEKVSEELILPSSPTPQSLKCYKISHLDQLLLTCHIPFILFYPNPLDSNLDPAQTSQ 61

Query: 62  RLKSSLSKTLTKFYPFAGRLKDDFSIVCNDQGAEYVEALANGFLSEYLQK-PDQKLLRDF 120
            LK SLSK LT FYP AGR+  + S+ CND G  +VEA     LS+ +Q   + + L  +
Sbjct: 62  HLKQSLSKVLTHFYPLAGRINVNSSVDCNDSGVPFVEARVQAQLSQAIQNVVELEKLDQY 121

Query: 121 HPFK-YAESSAAGIGDPMLRIQATFFKCGGLAIAVCTHHKLIDGSSVGTFVNSWTATARA 179
            P   Y         D  L ++ +FF+CGG AI V   HK+ D  S+ TF+N+WTAT R 
Sbjct: 122 LPSAAYPGGKIEVNEDVPLAVKISFFECGGTAIGVNLSHKIADVLSLATFLNAWTATCRG 181

Query: 180 DSQSSSISNINKQVIPAF-VAATFFPASESF 209
           +++          V+P F +AA  FP  ++ 
Sbjct: 182 ETEI---------VLPNFDLAARHFPPVDNT 203
>4g22_A Hydroxycinnamoyl-COA shikimate/quinate hydroxycinnamoyltransferase; BAHD superfamily; 1.70A {Coffea canephora} PDB: 4g2m_A 4g0b_A Length = 439 Back     alignment and structure
>2xr7_A Malonyltransferase; xenobiotics, naphthols; HET: MLC; 3.10A {Nicotiana tabacum} Length = 453 Back     alignment and structure
>2e1v_A Acyl transferase; BAHD superfamily, seleno-methionine derivative, dendranthema morifolium, DMAT; 1.80A {Chrysanthemum x morifolium} PDB: 2e1u_A 2e1t_A Length = 454 Back     alignment and structure
>2rkv_A Trichothecene 3-O-acetyltransferase; BAHD superfamily, deoxyniv T-2, acetyl COA, fusarium; HET: COA MPO ZBA; 1.60A {Gibberella zeae} PDB: 3b2s_A* 3b30_A* 2rkt_A* 2zba_A* Length = 451 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query209
4g22_A 439 Hydroxycinnamoyl-COA shikimate/quinate hydroxycinn 100.0
2bgh_A 421 Vinorine synthase; VS, BAHD, acetyltransferase, au 100.0
2e1v_A 454 Acyl transferase; BAHD superfamily, seleno-methion 100.0
2xr7_A 453 Malonyltransferase; xenobiotics, naphthols; HET: M 100.0
2rkv_A 451 Trichothecene 3-O-acetyltransferase; BAHD superfam 99.97
1q9j_A 422 PAPA5, polyketide synthase associated protein 5; c 97.85
4hvm_A 493 Tlmii; PSI-biology, midwest center for structural 97.23
1l5a_A 436 Amide synthase, VIBH; nonribosomal peptide synthet 97.11
2jgp_A 520 Tyrocidine synthetase 3; multifunctional enzyme, a 97.03
2xhg_A 466 Tyrocidine synthetase A; isomerase, nonribosomal p 96.24
2vsq_A 1304 Surfactin synthetase subunit 3; ligase, peptidyl c 95.73
3cla_A213 Type III chloramphenicol acetyltransferase; transf 82.94
2i9d_A217 Chloramphenicol acetyltransferase; structural geno 82.28
1q23_A219 Chloramphenicol acetyltransferase; CAT I, trimer, 81.59
3b8k_A239 PDCE2;, dihydrolipoyllysine-residue acetyltransfer 81.41
>4g22_A Hydroxycinnamoyl-COA shikimate/quinate hydroxycinnamoyltransferase; BAHD superfamily; 1.70A {Coffea canephora} PDB: 4g2m_A 4g0b_A Back     alignment and structure
Probab=100.00  E-value=6.8e-43  Score=311.93  Aligned_cols=188  Identities=29%  Similarity=0.493  Sum_probs=158.4

Q ss_pred             CCcceEEEEeeeEEecCCCCCCCCccccCCcccccccccceEEEEEEcCCCCCCchhHHHHHHHHHHHhhccccccCcee
Q 041969            2 VRALEVQVLTRENIKPLYPTPHHLRNFKLSLMDQITFPIYVCTIFLYKADGSVKSYQISQRLKSSLSKTLTKFYPFAGRL   81 (209)
Q Consensus         2 ~~~~~V~v~~~~~V~P~~~~~~~~~~~~LS~lD~~~~~~~i~~~~~f~~~~~~~~~~~~~~L~~sL~~~L~~~p~laGrl   81 (209)
                      |++|+|+|.++++|+|+.+++.  +.++||+||+.+++.|++.+|||+.+.. +....+++||+||+++|++||||||||
T Consensus         3 m~~~~V~i~~~~~V~P~~~tp~--~~~~LS~lD~~~~~~~~~~~~~y~~~~~-~~~~~~~~Lk~sLs~~L~~f~plAGRl   79 (439)
T 4g22_A            3 MGSMKIEVKESTMVRPAQETPG--RNLWNSNVDLVVPNFHTPSVYFYRPTGS-SNFFDAKVLKDALSRALVPFYPMAGRL   79 (439)
T ss_dssp             ---CCEEEEEEEEECCSSCCCC--CEECCCHHHHSCCTTCCCEEEEECCCSC-TTTTCHHHHHHHHHHHTTTTGGGGCEE
T ss_pred             CCceEEEEeeeEEEeCCCCCCC--CeecCChhHhCccccceeeEEEEcCCCC-ccccHHHHHHHHHHHHHhhccccceee
Confidence            4679999999999999998863  5799999999988899999999997643 234568999999999999999999999


Q ss_pred             c----CCeEEEeCCCCceEEEEeeccchhhhcCCCChhhhcCcccCccccCCcCCCCCCeeEEEEEEecCCcEEEEeccc
Q 041969           82 K----DDFSIVCNDQGAEYVEALANGFLSEYLQKPDQKLLRDFHPFKYAESSAAGIGDPMLRIQATFFKCGGLAIAVCTH  157 (209)
Q Consensus        82 ~----~~~~I~~~~~gv~f~~a~~d~~l~~l~~~p~~~~~~~l~P~~~~~~~~~~~~~Pll~vQvt~f~cGG~~Lg~~~~  157 (209)
                      +    ++++|.||++||.|+||++|++++|+....+...+..|+|......+.  .+.|++.+|+|+|+|||++||+++|
T Consensus        80 ~~~~~g~~~i~c~~~Gv~fv~A~~d~~l~~l~~~~p~~~~~~l~p~~~~~~~~--~~~pll~vQvT~f~cGG~~lg~~~~  157 (439)
T 4g22_A           80 KRDEDGRIEIECNGEGVLFVEAESDGVVDDFGDFAPTLELRRLIPAVDYSQGI--SSYALLVLQVTYFKCGGVSLGVGMR  157 (439)
T ss_dssp             EECTTSCEEEECCCCCEEEEEEEESSCGGGGTTCCCCGGGGGGSCCCCTTSCT--TSSCSEEEEEEECTTSCEEEEEEEC
T ss_pred             eeCCCCCEEEEECCCCCEEEEEEcCCcHHHhcCCCCCHHHHhcCCCCCccccc--ccCceeEEEEEEecCCCEEEEEEee
Confidence            8    479999999999999999999999997532223456788765322222  5679999999999999999999999


Q ss_pred             eeccchhhHHHHHHHHHHHHhcCCCCccccccCcccCCcccccccC
Q 041969          158 HKLIDGSSVGTFVNSWTATARADSQSSSISNINKQVIPAFVAATFF  203 (209)
Q Consensus       158 H~v~Dg~g~~~fl~~Wa~~~rg~~~~~~~~~~~~~~~p~~dr~~~~  203 (209)
                      |.++||.|+.+|+++||++|||.         ....+|+|||+.|.
T Consensus       158 H~v~Dg~~~~~Fl~~wa~~~rg~---------~~~~~P~~dr~~l~  194 (439)
T 4g22_A          158 HHAADGFSGLHFINSWSDMARGL---------DVTLPPFIDRTLLR  194 (439)
T ss_dssp             TTTCCHHHHHHHHHHHHHHHTTC---------CCSSCCBCCGGGGC
T ss_pred             eccCcHHHHHHHHHHHHHHhCCC---------CCCCCCcccccccc
Confidence            99999999999999999999997         33457999999653
>2bgh_A Vinorine synthase; VS, BAHD, acetyltransferase, auto-rickshaw, transferase; 2.6A {Rauvolfia serpentina} Back     alignment and structure
>2e1v_A Acyl transferase; BAHD superfamily, seleno-methionine derivative, dendranthema morifolium, DMAT; 1.80A {Chrysanthemum x morifolium} PDB: 2e1u_A 2e1t_A Back     alignment and structure
>2xr7_A Malonyltransferase; xenobiotics, naphthols; HET: MLC; 3.10A {Nicotiana tabacum} Back     alignment and structure
>2rkv_A Trichothecene 3-O-acetyltransferase; BAHD superfamily, deoxyniv T-2, acetyl COA, fusarium; HET: COA MPO ZBA; 1.60A {Gibberella zeae} PDB: 3b2s_A* 3b30_A* 2rkt_A* 2zba_A* Back     alignment and structure
>1q9j_A PAPA5, polyketide synthase associated protein 5; conjugating enzyme PAPA5, structural genomics, PSI protein structure initiative; 2.75A {Mycobacterium tuberculosis} SCOP: c.43.1.2 c.43.1.2 Back     alignment and structure
>4hvm_A Tlmii; PSI-biology, midwest center for structural genomics, MCSG, N product biosynthesis, natPro; 2.70A {Streptoalloteichus hindustanus} Back     alignment and structure
>1l5a_A Amide synthase, VIBH; nonribosomal peptide synthetase, NRPS condensation domain, vibriobactin, biosynthetic protein; 2.55A {Vibrio cholerae} SCOP: c.43.1.2 c.43.1.2 Back     alignment and structure
>2jgp_A Tyrocidine synthetase 3; multifunctional enzyme, antibiotic biosynthesis, condensatio domain, peptide bond formation, ligase; 1.85A {Brevibacillus brevis} Back     alignment and structure
>2xhg_A Tyrocidine synthetase A; isomerase, nonribosomal peptide synthesis, cofactor-independ epimerization; 1.50A {Brevibacillus brevis} Back     alignment and structure
>2vsq_A Surfactin synthetase subunit 3; ligase, peptidyl carrier protein, ligase phosphoprotein, TER module, phosphopantetheine; 2.60A {Bacillus subtilis} Back     alignment and structure
>3cla_A Type III chloramphenicol acetyltransferase; transferase (acyltransferase); HET: CLM; 1.75A {Escherichia coli} SCOP: c.43.1.1 PDB: 1cla_A* 2cla_A 4cla_A* 1cia_A 1qca_A* Back     alignment and structure
>2i9d_A Chloramphenicol acetyltransferase; structural genomics, PSI- protein structure initiative, midwest center for structural genomics; 2.30A {Bacteroides thetaiotaomicron} Back     alignment and structure
>1q23_A Chloramphenicol acetyltransferase; CAT I, trimer, fusidic acid; HET: FUA; 2.18A {Escherichia coli} SCOP: c.43.1.1 PDB: 1noc_B 1pd5_A* 3u9b_A 3u9f_A* Back     alignment and structure
>3b8k_A PDCE2;, dihydrolipoyllysine-residue acetyltransferase; central beta-sheet surrounded by five alpha-helices; 8.80A {Homo sapiens} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query209
d1q9ja1175 Polyketide synthase associated protein 5, PapA5 {M 97.77
d1l5aa1174 VibH {Vibrio cholerae [TaxId: 666]} 97.72
d1q23a_214 Chloramphenicol acetyltransferase, CAT {Escherichi 85.59
d3claa_213 Chloramphenicol acetyltransferase, CAT {Escherichi 85.28
>d1q9ja1 c.43.1.2 (A:1-175) Polyketide synthase associated protein 5, PapA5 {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: CoA-dependent acyltransferases
superfamily: CoA-dependent acyltransferases
family: NRPS condensation domain (amide synthase)
domain: Polyketide synthase associated protein 5, PapA5
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=97.77  E-value=6.8e-05  Score=55.66  Aligned_cols=132  Identities=14%  Similarity=0.143  Sum_probs=73.4

Q ss_pred             ccCCccccccc--ccceEEEEEEcCCCCCCchhHHHHHHHHHHHhhccccccCceec---CCeEEEeCCCCceEEEEeec
Q 041969           28 FKLSLMDQITF--PIYVCTIFLYKADGSVKSYQISQRLKSSLSKTLTKFYPFAGRLK---DDFSIVCNDQGAEYVEALAN  102 (209)
Q Consensus        28 ~~LS~lD~~~~--~~~i~~~~~f~~~~~~~~~~~~~~L~~sL~~~L~~~p~laGrl~---~~~~I~~~~~gv~f~~a~~d  102 (209)
                      -+|+..++...  ..++...+-.+.+-      ..++|++++..++.++|.|-.+++   +........+.........+
T Consensus         8 r~l~~~e~~~~~~~~~~~~~~~l~g~l------d~~~l~~A~~~lv~rh~~LRt~f~~~~~~~~~~~~~~~~~~~~~~~d   81 (175)
T d1q9ja1           8 RKLSHSEEVFAQYEVFTSMTIQLRGVI------DVDALSDAFDALLETHPVLASHLEQSSDGGWNLVADDLLHSGICVID   81 (175)
T ss_dssp             EECCHHHHHHHHTTCEEEEEEEEESCC------CHHHHHHHHHHHHHHCGGGSEEEEECTTSSEEEEECCSSSCCCEEEC
T ss_pred             HHhCHHhhhcccCceEEEEEEEEcCCC------CHHHHHHHHHHHHHhchhheEEEEEeCCeeEEEEECCCCCccEEEEE
Confidence            44777777654  34555555555443      489999999999999999999986   12211111111100000001


Q ss_pred             cchhhhcCCCChhhhcCcccCccccCCcCCCCCCeeEEEEEEecCCcEEEEeccceeccchhhHHHHHHHHHHHHh
Q 041969          103 GFLSEYLQKPDQKLLRDFHPFKYAESSAAGIGDPMLRIQATFFKCGGLAIAVCTHHKLIDGSSVGTFVNSWTATAR  178 (209)
Q Consensus       103 ~~l~~l~~~p~~~~~~~l~P~~~~~~~~~~~~~Pll~vQvt~f~cGG~~Lg~~~~H~v~Dg~g~~~fl~~Wa~~~r  178 (209)
                      .+-.+      ......-.+..     . ..+.|+..+.+.. .+++..|.+.+||.++||.|+..+++.+.+...
T Consensus        82 ~~~~~------~~~~~~~~~~~-----l-~~~~~l~~~~i~~-~~~~~~l~l~~HH~i~Dg~S~~~ll~el~~~Y~  144 (175)
T d1q9ja1          82 GTAAT------NGSPSGNAELR-----L-DQSVSLLHLQLIL-REGGAELTLYLHHCMADGHHGAVLVDELFSRYT  144 (175)
T ss_dssp             ------------------CCCC-----C-CTTTCSEEEEEEC-CSSSCEEEEEEEGGGCCHHHHHHHHHHHHHHHH
T ss_pred             cccch------hHHHHhhcccC-----c-cCCCCeEEEEEEe-cCCeEEEEEEccccccCHhHHHHHHHHHHHHHH
Confidence            00000      00000001111     0 1344555554443 347788889999999999999999998876654
>d1l5aa1 c.43.1.2 (A:1-174) VibH {Vibrio cholerae [TaxId: 666]} Back     information, alignment and structure
>d1q23a_ c.43.1.1 (A:) Chloramphenicol acetyltransferase, CAT {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d3claa_ c.43.1.1 (A:) Chloramphenicol acetyltransferase, CAT {Escherichia coli [TaxId: 562]} Back     information, alignment and structure