Citrus Sinensis ID: 041987

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280
Protein Sequence
MGLVRGQMEEEMVPFTLMVIMEGCTIGLTIVTKTAMNGGMSPFVFIAYTNALGSILLLPYSFFFHHRGSEAQPLFTLPLMLRFFFLGLTGVAISQNLAFFGLYYSSPIVVCVMGLLIPAISFLLSIITRKAASDDKLEAKINPPLLIFYSTPDRWVLGSTLLAASSLSVCVWNIIQVGTIKQYPQVMKVVSFYSLAGTIQCSIFSLIMERNINAWKLKLNMELLLIIITAIFGSVIRSTVHVSCAEMKGHLYVPMFKPFGIVFATAFGLTFFTNSLHYGR
Secondary Structure (PSIPRED)
ccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccEEEEEccccccccccccccHHHHHHHHHccHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccEEcccccHHHHHHHHHHHHHHcccccccc
Secondary Structure Prediction (SSPRO)
cccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHEEEEEEcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHccccHEEEcccHHHHHHHHHHHHHHHHHHHHHHHHHHccccEEEEcHcHHHHHHHHHHHHHHHHHHHcccc
Coil and Loop (DISEMBL)
mglvrgqmeeemVPFTLMVIMEGCTIGLTIVTKtamnggmspFVFIAYTNALGSILLLpysfffhhrgseaqplftlpLMLRFFFLGLTGVAISQNLAFFGLYYSSPIVVCVMGLLIPAISFLLSIITRKaasddkleakinppllifystpdrwvlGSTLLAASSLSVCVWNIIQVGTIKQYPQVMKVVSFYSLAGTIQCSIFSLIMERNINAWKLKLNMELLLIIITAIFGSVIRSTVHVSCaemkghlyvpmfkpfGIVFATAFGLTFFTNSLHYGR
Flexible Loop (DISEMBL)
MGLVRGQMEEEMVPFTLMVIMEGCTIGLTIVTKTAMNGGMSPFVFIAYTNALGSILLLPYSFFFHHRGSEAQPLFTLPLMLRFFFLGLTGVAISQNLAFFGLYYSSPIVVCVMGLLIPAISFLLSIITRKAASDDKLEAKINPPLLIFYSTPDRWVLGSTLLAASSLSVCVWNIIQVGTIKQYPQVMKVVSFYSLAGTIQCSIFSLIMERNINAWKLKLNMELLLIIITAIFGSVIRSTVHVSCAEMKGHLYVPMFKPFGIVFATAFGLTFFTNSLHYGR
Low Complexity Region (SEG)
MGLVRGQMEEEMVPFTLMVIMEGCTIGLTIVTKTAMNGGMSPFVFIAYTNALGSILLLPYSFFFHHRGSEAQPLFTLPLMLRFFFLGLTGVAISQNLAFFGLYYSSPIVVCVMGLLIPAISFLLSIITRKAASDDKLEAKINPPLLIFYSTPDRWVlgstllaasslsVCVWNIIQVGTIKQYPQVMKVVSFYSLAGTIQCSIFSLIMERNINAWKLKLNMELLLIIITAIFGSVIRSTVHVSCAEMKGHLYVPMFKPFGIVFATAFGLTFFTNSLHYGR
Disordered region (IsUnstruct)
***********MVPFTLMVIMEGCTIGLTIVTKTAMNGGMSPFVFIAYTNALGSILLLPYSFFFHHRGSEAQPLFTLPLMLRFFFLGLTGVAISQNLAFFGLYYSSPIVVCVMGLLIPAISFLLSIITRKAASDDKLEAKINPPLLIFYSTPDRWVLGSTLLAASSLSVCVWNIIQVGTIKQYPQVMKVVSFYSLAGTIQCSIFSLIMERNINAWKLKLNMELLLIIITAIFGSVIRSTVHVSCAEMKGHLYVPMFKPFGIVFATAFGLTFFTNSLH***
Disordered Region (DISOPRED)
*************PFTLMVIMEGCTIGLTIVTKTAMNGGMSPFVFIAYTNALGSILLLPYSFFFHHRGSEAQPLFTLPLMLRFFFLGLTGVAISQNLAFFGLYYSSPIVVCVMGLLIPAISFLLSIITRKAASDDKLEAKINPPLLIFYSTPDRWVLGSTLLAASSLSVCVWNIIQVGTIKQYPQVMKVVSFYSLAGTIQCSIFSLIMERNINAWKLKLNMELLLIIITAIFGSVIRSTVHVSCAEMKGHLYVPMFKPFGIVFATAFGLTFFTNSLHYG*
Disordered Region (DISEMBL)
********EEEMVPFTLMVIMEGCTIGLTIVTKTAMNGGMSPFVFIAYTNALGSILLLPYSFFFHHRGSEAQPLFTLPLMLRFFFLGLTGVAISQNLAFFGLYYSSPIVVCVMGLLIPAISFLLSIITRKAASDDKLEAKINPPLLIFYSTPDRWVLGSTLLAASSLSVCVWNIIQVGTIKQYPQVMKVVSFYSLAGTIQCSIFSLIMERNINAWKLKLNMELLLIIITAIFGSVIRSTVHVSCAEMKGHLYVPMFKPFGIVFATAFGLTFFTNSLHYGR
Disordered Region (DISPRO)
*****GQMEEEMVPFTLMVIMEGCTIGLTIVTKTAMNGGMSPFVFIAYTNALGSILLLPYSFFFHHRGSEAQPLFTLPLMLRFFFLGLTGVAISQNLAFFGLYYSSPIVVCVMGLLIPAISFLLSIITRKAASDDKLEAKINPPLLIFYSTPDRWVLGSTLLAASSLSVCVWNIIQVGTIKQYPQVMKVVSFYSLAGTIQCSIFSLIMERNINAWKLKLNMELLLIIITAIFGSVIRSTVHVSCAEMKGHLYVPMFKPFGIVFATAFGLTFFTNSLHYGR
Transmembrane Helix (TMHMM)
ooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiHHHHHHHHHHHHHHHHHHHHooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHHHHHiiiii
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MGLVRGQMEEEMVPFTLMVIMEGCTIGLTIVTKTAMNGGMSPFVFIAYTNALGSILLLPYSFFFHHRGSEAQPLFTLPLMLRFFFLGLTGVAISQNLAFFGLYYSSPIVVCVMGLLIPAISFLLSIITRKAASDDKLEAKINPPLLIFYSTPDRWVLGSTLLAASSLSVCVWNIIQVGTIKQYPQVMKVVSFYSLAGTIQCSIFSLIMERNINAWKLKLNMELLLIIITAIFGSVIRSTVHVSCAEMKGHLYVPMFKPFGIVFATAFGLTFFTNSLHYGR
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	280	2.2.26 [Sep-21-2011]
F4I5D5	375	WAT1-related protein At1g	yes	no	0.967	0.722	0.527	3e-87
Q9ZUI8	374	WAT1-related protein At1g	no	no	0.992	0.743	0.517	8e-87
Q94JU2	367	WAT1-related protein At3g	no	no	0.978	0.746	0.322	7e-33
Q9FL08	368	WAT1-related protein At5g	no	no	0.953	0.725	0.294	4e-28
F4KHA8	370	WAT1-related protein At5g	no	no	0.953	0.721	0.294	5e-26
Q945L4	339	WAT1-related protein At5g	no	no	0.967	0.799	0.288	4e-24
Q9LXX8	377	WAT1-related protein At3g	no	no	0.975	0.724	0.25	8e-24
Q8GXB4	374	WAT1-related protein At1g	no	no	0.957	0.716	0.269	1e-23
Q9M130	365	WAT1-related protein At4g	no	no	0.925	0.709	0.254	1e-23
Q9FL41	402	WAT1-related protein At5g	no	no	0.9	0.626	0.260	4e-23

>sp|F4I5D5|WTR11_ARATH WAT1-related protein At1g70260 OS=Arabidopsis thaliana GN=At1g70260 PE=2 SV=1

 Score =  321 bits (823), Expect = 3e-87,   Method: Compositional matrix adjust.
 Identities = 163/309 (52%), Positives = 203/309 (65%), Gaps = 38/309 (12%)

Query: 9   EEEMVPFTLMVIMEGCTIGLTIVTKTAMNGGMSPFVFIAYTNALGSILLLPYSFFFHHRG 68
            +E+VPF  M IME CTI LTI+ KTA+ GGMSPFVF+ YTNA GSILLLP+SF FH   
Sbjct: 7   RDELVPFVAMAIMEACTIALTIMAKTALTGGMSPFVFVVYTNAFGSILLLPFSFLFHRNE 66

Query: 69  SEAQPLFTLPLMLRFFFLGLTGVAISQNLAFFGLYYSSPIVVCVMGLLIPAISFLLSIIT 128
              Q +F+ PL++R FFLG TG+ + QNLAF GL +SSPIVVC MGL IP+ SFLLSII 
Sbjct: 67  RTEQSIFSWPLLVRVFFLGFTGIFMFQNLAFVGLRFSSPIVVCAMGLQIPSFSFLLSIIL 126

Query: 129 -------RKAASDDKLEAKIN-------------------------------PPLLIFYS 150
                  R  ++  KL   I                                P LL++Y+
Sbjct: 127 GRSKLDWRNTSTRAKLMGTIVSLSGAFVEELYKGPFIRPASSASPNRFLKSVPKLLVYYN 186

Query: 151 TPDRWVLGSTLLAASSLSVCVWNIIQVGTIKQYPQVMKVVSFYSLAGTIQCSIFSLIMER 210
            PD W LG   LA +  SV ++N++Q GT+K+YP VMKV SFYS+ GTIQC +FSL MER
Sbjct: 187 LPDNWFLGCIFLAVAVFSVSLFNVVQTGTVKKYPHVMKVASFYSIVGTIQCLLFSLFMER 246

Query: 211 NINAWKLKLNMELLLIIITAIFGSVIRSTVHVSCAEMKGHLYVPMFKPFGIVFATAFGLT 270
           +++AWK++ N +L LII T  FGSVIR++VHV C +MKG  YVP+FKPFGI +AT FG +
Sbjct: 247 DLSAWKIQPNFDLYLIIATGTFGSVIRTSVHVKCTQMKGPYYVPLFKPFGIFWATLFGTS 306

Query: 271 FFTNSLHYG 279
           FF NSLHYG
Sbjct: 307 FFVNSLHYG 315

Arabidopsis thaliana (taxid: 3702)

>sp|Q9ZUI8|WTR9_ARATH WAT1-related protein At1g60050 OS=Arabidopsis thaliana GN=At1g60050 PE=3 SV=1

 Score =  320 bits (820), Expect = 8e-87,   Method: Compositional matrix adjust.
 Identities = 165/319 (51%), Positives = 212/319 (66%), Gaps = 41/319 (12%)

Query: 1   MGLVRGQMEEEMVPFTLMVIMEGCTIGLTIVTKTAMNGGMSPFVFIAYTNALGSILLLPY 60
           MGL+  + E  +VPF +M +ME CTI LTI+ KTA+ GGMSPFVFI YTNALGS+LLLPY
Sbjct: 1   MGLMDTRWET-IVPFIVMALMEACTIALTILAKTALTGGMSPFVFIVYTNALGSLLLLPY 59

Query: 61  SFFFHHRGSEAQPLFTLPLMLRFFFLGLTGVAISQNLAFFGLYYSSPIVVCVMGLLIPAI 120
           SF+FH   S+ +P  T P ++R F LG TGV + QN+AF GL YSSPIVVC MGL  PA 
Sbjct: 60  SFYFHRDESDDEPFLTKPSLVRIFLLGFTGVFLFQNMAFLGLSYSSPIVVCAMGLQSPAF 119

Query: 121 SFLLSIITRKAA----SDDKLEAKINPPL------------------------------- 145
           SFLLS+   K      +  + + ++   L                               
Sbjct: 120 SFLLSLALGKEGGLGWASKRTKGRVIGTLICFTGAFVEVIYLGPFIRPSPPSSPTSNFLT 179

Query: 146 -----LIFYSTPDRWVLGSTLLAASSLSVCVWNIIQVGTIKQYPQVMKVVSFYSLAGTIQ 200
                L F+   D W LGS LLA ++LS+ +WNIIQ+ T+++YPQVMKVVS YSLAGT+Q
Sbjct: 180 TISHYLTFFKNSDNWALGSLLLACATLSISIWNIIQLDTVQKYPQVMKVVSAYSLAGTLQ 239

Query: 201 CSIFSLIMERNINAWKLKLNMELLLIIITAIFGSVIRSTVHVSCAEMKGHLYVPMFKPFG 260
           C+IFS  ME +++AW+LKLNM+L LII T IFGS+IR++V V C++MKG  YVP+FKPFG
Sbjct: 240 CAIFSAFMEPDLSAWELKLNMDLYLIIATGIFGSIIRTSVQVKCSKMKGPYYVPLFKPFG 299

Query: 261 IVFATAFGLTFFTNSLHYG 279
           I++A+ FG +FF NSLHYG
Sbjct: 300 ILWASIFGTSFFVNSLHYG 318

Arabidopsis thaliana (taxid: 3702)

>sp|Q94JU2|WTR18_ARATH WAT1-related protein At3g28050 OS=Arabidopsis thaliana GN=At3g28050 PE=2 SV=1

 Score =  140 bits (354), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 99/307 (32%), Positives = 153/307 (49%), Gaps = 33/307 (10%)

Query: 3   LVRGQMEEEMVPFTLMVIMEGCTIGLTIVTKTAMNGGMSPFVFIAYTNALGSILLLPYSF 62
           + R   + E++P T +VIME   +GL  + K A   GMS  VFI Y+  L ++LLLP S 
Sbjct: 1   MARKYFQREVLPVTALVIMECANVGLNTLFKAATLKGMSFHVFIVYSYGLAALLLLP-SL 59

Query: 63  FFHHRGSEAQPLFTLPLMLRFFFLGLTGVAISQNLAFFGLYYSSPIVVCVMGLLIPAISF 122
           F   R S   P     ++ +   LG+ G   S  + + G+ YSSP +   +  L PA +F
Sbjct: 60  FCSFR-SRTLPPMNFSILYKIVLLGIIGCC-SNIMGYTGINYSSPTLASAISNLTPAFTF 117

Query: 123 LLSIITRKAASDDKLEAKI-------------------NPPLLIFYSTPD---------- 153
           LL+++ R  +   K  + +                   N P++I  S P           
Sbjct: 118 LLAVVFRMESVSFKRTSSVAKMLGTVVSIGGAFIVTLYNGPVVIAKSPPSVSLRSQSTNP 177

Query: 154 RWVLGSTLLAASSLSVCVWNIIQVGTIKQYPQVMKVVSFYSLAGTIQCSIFSLIMERN-I 212
            W+LG+  LA     V +W I+Q   +++YP    VV FYS+  +   ++ +L  E N +
Sbjct: 178 NWILGAGFLAVEYFCVPLWYIVQTQIMREYPAEFTVVCFYSIGVSFWTALVTLFTEGNDL 237

Query: 213 NAWKLKLNMELLLIIITAIFGSVIRSTVHVSCAEMKGHLYVPMFKPFGIVFATAFGLTFF 272
            AWK+K N+ L+ I+ + +FGS I +T+H     +KG L+V MFKP  I  A A G+ F 
Sbjct: 238 GAWKIKPNIALVSIVCSGLFGSCINNTIHTWALRIKGPLFVAMFKPLSIAIAVAMGVIFL 297

Query: 273 TNSLHYG 279
            +SL+ G
Sbjct: 298 RDSLYIG 304

Arabidopsis thaliana (taxid: 3702)

>sp|Q9FL08|WTR42_ARATH WAT1-related protein At5g40240 OS=Arabidopsis thaliana GN=At5g40240 PE=2 SV=1

 Score =  125 bits (313), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 90/306 (29%), Positives = 142/306 (46%), Gaps = 39/306 (12%)

Query: 10  EEMVPFTLMVIMEGCTIGLTIVTKTAMNGGMSPFVFIAYTNALGSILLLPYSFFFHHRGS 69
            ++VPF  M  +E  T+G   + K A   G+S +VF+ Y+  + ++LLLP S  F    S
Sbjct: 16  RDVVPFAAMFAVECATVGSNTLFKAATLRGLSFYVFVFYSYIVSTLLLLPLSVIFGR--S 73

Query: 70  EAQPLFTLPLMLRFFFLGLTGVAISQNLAFFGLYYSSPIVVCVMGLLIPAISFLLSII-- 127
              P    PL  + F LGL G  +SQ     G+ YSSP +   +  L PA +F L++I  
Sbjct: 74  RRLPAAKSPLFFKIFLLGLVGF-MSQIAGCKGIAYSSPTLASAISNLTPAFTFTLAVIFR 132

Query: 128 -----TRKAASDDKLEAKI----NPPLLIFYSTPD------------------------- 153
                 R +A+  K+   I       +++ Y  P                          
Sbjct: 133 MEQVRLRSSATQAKIIGAILSISGALVVVLYKGPQVLASASFTTVLPTVTLHQQLTSIES 192

Query: 154 RWVLGSTLLAASSLSVCVWNIIQVGTIKQYPQVMKVVSFYSLAGTIQCSIFSLIMERNIN 213
            W++G  LLA+    + VW I+Q   ++ YP+ + VV FY+L  T+      L  E N+ 
Sbjct: 193 SWIIGGLLLASQYFLISVWYILQTRVMEVYPEEITVVFFYNLFATLISVPVCLFAESNLT 252

Query: 214 AWKLKLNMELLLIIITAIFGSVIRSTVHVSCAEMKGHLYVPMFKPFGIVFATAFGLTFFT 273
           +W LK ++ L  II + +F S+  +  H     +KG +Y+ +F+P  I  A A G  F  
Sbjct: 253 SWVLKPDISLAAIIYSGVFVSLFSALTHTWGLHLKGPVYISLFRPLSIAIAVAMGAIFLG 312

Query: 274 NSLHYG 279
           ++LH G
Sbjct: 313 DALHLG 318

Arabidopsis thaliana (taxid: 3702)

>sp|F4KHA8|WTR41_ARATH WAT1-related protein At5g40230 OS=Arabidopsis thaliana GN=At5g40230 PE=2 SV=1

 Score =  118 bits (295), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 90/306 (29%), Positives = 146/306 (47%), Gaps = 39/306 (12%)

Query: 10  EEMVPFTLMVIMEGCTIGLTIVTKTAMNGGMSPFVFIAYTNALGSILLLPYSFFFHHRGS 69
            ++VPFT MV +E  T+G   + K A   G+S +VF+ YT  + +++LLP S  F    S
Sbjct: 17  RDVVPFTAMVAVECVTVGSNTLFKAATLRGLSFYVFVFYTYVVATLVLLPLSLIFGR--S 74

Query: 70  EAQPLFTLPLMLRFFFLGLTGVAISQNLAFFGLYYSSPIVVCVMGLLIPAISFLLSII-- 127
           +  P    P+    F L L G  +S  +   G+ YSSP +   +  L PA +F L++I  
Sbjct: 75  KRLPSAKTPVFFNIFLLALVGF-MSLIVGCKGIEYSSPTLASAISNLTPAFTFTLAVIFR 133

Query: 128 -----TRKAASDDKL-----------------------EAKINPP--LLIFY----STPD 153
                 R +A+  K+                       +A + PP   +  Y    S   
Sbjct: 134 MEQIVLRSSATQAKIIGTIVSISGALVVILYKGPKVLTDASLTPPSPTISLYQHLTSFDS 193

Query: 154 RWVLGSTLLAASSLSVCVWNIIQVGTIKQYPQVMKVVSFYSLAGTIQCSIFSLIMERNIN 213
            W++G  LLA   L V VW I+Q   ++ YP+ + VV  Y+L  T+  +   L  E+++N
Sbjct: 194 SWIIGGLLLATQYLLVSVWYILQTRVMELYPEEITVVFLYNLCATLISAPVCLFAEKDLN 253

Query: 214 AWKLKLNMELLLIIITAIFGSVIRSTVHVSCAEMKGHLYVPMFKPFGIVFATAFGLTFFT 273
           ++ LK  + L  ++ +    S   S +H     +KG +Y+ +FKP  IV A A G+ F  
Sbjct: 254 SFILKPGVSLASVMYSGGLVSSFGSVIHTWGLHLKGPVYISLFKPLSIVIAVAMGVMFLG 313

Query: 274 NSLHYG 279
           ++L+ G
Sbjct: 314 DALYLG 319

Arabidopsis thaliana (taxid: 3702)

>sp|Q945L4|WTR40_ARATH WAT1-related protein At5g40210 OS=Arabidopsis thaliana GN=At5g40210 PE=2 SV=1

 Score =  112 bits (279), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 86/298 (28%), Positives = 145/298 (48%), Gaps = 27/298 (9%)

Query: 3   LVRGQM-EEEMVPFTLMVIMEGCTIGLTIVTKTAMNGGMSPFVFIAYTNALGSILLLPYS 61
           +V G++   +    T MV+ E   +G+  + K A + G+SPFV + Y+   GS+LLLP +
Sbjct: 1   MVHGRLCNRDGWILTAMVVTEFSNVGVNTLVKAATSKGLSPFVVLVYSYTFGSLLLLPLT 60

Query: 62  FFFHHRGSEAQPLFTLPLMLRFFFLGLTGVAISQNLAFFGLYYSSPIVVCVMGLLIPAIS 121
           FF     S + P  T  ++     LGL   A  Q L + G+ YSSP +   M  + PA +
Sbjct: 61  FFSFR--SRSLPPLTFSILCNMGILGLIASAF-QILGYNGIKYSSPTLSSAMSNVNPAFT 117

Query: 122 FLLSIITR-------KAASDDKLEAKI------------NPPLLIFYSTPDRWVLGSTLL 162
           F+L+++ R       K +S  K+   I            + P+L+  S+   W++G  LL
Sbjct: 118 FILAVVFRMENISLGKKSSVAKVLGTILSIIGALVVTLYHGPMLM--SSHSDWIIGGGLL 175

Query: 163 AASSLSVCVWNIIQVGTIKQYPQVMKVVSFYSLAGTIQCSIFSLIMER-NINAWKLKLNM 221
           A   + V V  ++   T+ +YP  + V   +++   + C+  SL+ E+ N  AW ++ ++
Sbjct: 176 ALQYILVSVSYLVMAHTMGRYPSAVVVTLVHNVCIAVVCAFVSLLAEKDNPKAWVIRFDI 235

Query: 222 ELLLIIITAIFGSVIRSTVHVSCAEMKGHLYVPMFKPFGIVFATAFGLTFFTNSLHYG 279
            L+ ++ T I  S     +H      KG +Y+ MFKP  I+ A      F   SL+ G
Sbjct: 236 TLITVVATGILNSGYY-VIHTWAVSHKGPVYLSMFKPLSILIAAVSTFIFLGESLYLG 292

Arabidopsis thaliana (taxid: 3702)

>sp|Q9LXX8|WTR27_ARATH WAT1-related protein At3g56620 OS=Arabidopsis thaliana GN=At3g56620 PE=2 SV=1

 Score =  111 bits (277), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 77/308 (25%), Positives = 140/308 (45%), Gaps = 35/308 (11%)

Query: 1   MGLVRGQMEEEMVPFTLMVIMEGCTIGLTIVTKTAMNGGMSPFVFIAYTNALGSILLLPY 60
           MGL   +M E   P+  MV ++    G+ +VTK  ++ GMS +V +AY NA  +  + P+
Sbjct: 1   MGL---KMSESAKPYFAMVCLQFGYAGMNLVTKVVLDRGMSHYVLVAYRNAFATAAIAPF 57

Query: 61  SFFFHHRGSEAQPLFTLPLMLRFFFLGLTGVAISQNLAFFGLYYSSPIVVCVMGLLIPAI 120
           +     +    +P  T P+ ++ F L L G  I QNL + GL  +SP     +  ++PA+
Sbjct: 58  ALLSERK---VRPKMTFPIFMQIFVLALLGPLIDQNLYYAGLKLTSPTFAGAVTNIVPAL 114

Query: 121 SFLLSIITRKAASD---DKLEAKI--------NPPLLIFYSTP----------------- 152
           +F++SII R    +    + +AK+           L+I +  P                 
Sbjct: 115 TFIISIICRMEKVEMRKVRFQAKVVGTLVIVVGAMLMILFKIPLITFLRSHLTGHALSPA 174

Query: 153 -DRWVLGSTLLAASSLSVCVWNIIQVGTIKQYPQVMKVVSFYSLAGTIQCSIFSLIMERN 211
            + ++  +  L  +S S   + ++Q  T+K+Y   + + +     GT+Q +  + +ME N
Sbjct: 175 GEDYLKATVFLLIASFSWASFFVLQAATLKRYSSHLSLSTMVCFMGTLQSTALTFVMEPN 234

Query: 212 INAWKLKLNMELLLIIITAIFGSVIRSTVHVSCAEMKGHLYVPMFKPFGIVFATAFGLTF 271
           ++AW +  +M LL      I  S I   V     + K  ++V  F P  ++  +  G   
Sbjct: 235 LSAWNIGFDMNLLASAYAGIMSSSIAYYVQGMMTKQKSVIFVTAFNPLVVIIGSIIGFLI 294

Query: 272 FTNSLHYG 279
              +L+ G
Sbjct: 295 LNQTLNLG 302

Arabidopsis thaliana (taxid: 3702)

>sp|Q8GXB4|WTR2_ARATH WAT1-related protein At1g09380 OS=Arabidopsis thaliana GN=At1g09380 PE=2 SV=1

 Score =  110 bits (275), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 83/308 (26%), Positives = 132/308 (42%), Gaps = 40/308 (12%)

Query: 9   EEEMVPFTLMVIMEGCTIGLTIVTKTAMNGGMSPFVFIAYTNALGSILLLPYSFFFHHRG 68
           + +M+PF  MV+++    G+ I +K AM  GM P + +AY     +I   P +FF   + 
Sbjct: 3   KSDMLPFLAMVLVQIGYAGMNITSKMAMEAGMKPLILVAYRQIFATIATFPVAFFLERK- 61

Query: 69  SEAQPLFTLPLMLRFFFLGLTGVAISQNLAFFGLYYSSPIVVCVMGLLIPAISFLLSIIT 128
              +P  TL ++++ FF  +TG   +Q L F GL  SSP + C +  L+PA++FLL+ I 
Sbjct: 62  --TRPKITLRILVQVFFCSITGATGNQVLYFVGLQNSSPTIACALTNLLPAVTFLLAAIF 119

Query: 129 R-------KAASDDK----LEAKINPPLLIFY--------------------------ST 151
           R       KA+   K    L   I   +L FY                          S 
Sbjct: 120 RQETVGIKKASGQAKVIGTLVCVIGAMVLSFYHGHTIGIGESKIHWAYAENITKHGSSSG 179

Query: 152 PDRWVLGSTLLAASSLSVCVWNIIQVGTIKQYPQVMKVVSFYSLAGTIQCSIFSLIMERN 211
              + LG  L+ A+++S   W IIQ    + +           L G+IQC   +LI +  
Sbjct: 180 HSNFFLGPFLIMAAAVSWAAWFIIQTKMSETFAAPYTSTLLMCLMGSIQCGAIALISDHT 239

Query: 212 INAWKLKLNMELLLIIITAIFGSVIRSTVHVSCAEMKGHLYVPMFKPFGIVFATAFGLTF 271
           I+ W L   +  +  +   +  S +   +     + KG LYV +F P  +V    F    
Sbjct: 240 ISDWSLSSPLRFISALYAGVVASALAFCLMSWAMQRKGPLYVSVFSPLLLVVVAIFSWAL 299

Query: 272 FTNSLHYG 279
               L+ G
Sbjct: 300 LEEKLYTG 307

Arabidopsis thaliana (taxid: 3702)

>sp|Q9M130|WTR29_ARATH WAT1-related protein At4g01440 OS=Arabidopsis thaliana GN=At4g01440 PE=2 SV=1

 Score =  110 bits (275), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 75/295 (25%), Positives = 131/295 (44%), Gaps = 36/295 (12%)

Query: 6   GQMEEEMVPFTLMVIMEGCTIGLTIVTKTAMNGGMSPFVFIAYTNALGSILLLPYSFFFH 65
           G  + +  P  +MV++         + K  ++GG++  V   Y  A+ ++ L P +FF+ 
Sbjct: 2   GYCDGKWTPVIIMVMINSALGLANALVKKVLDGGVNHMVIATYRLAISTLFLAPIAFFWE 61

Query: 66  HRGSEAQPLFTLPLMLRFFFLGLTGVAISQNLAFFGLYYSSPIVVCVMGLLIPAISFLLS 125
            +    +P  TL ++++ FF  L G +++Q     GL Y+S  + C    + PAI+F+++
Sbjct: 62  RK---TRPTLTLNILVQLFFSALVGASLTQYFFLLGLSYTSATLACAFISMTPAITFVMA 118

Query: 126 IITRKAASDDKLEAKIN-----------PPLLIFYS----------------------TP 152
           +I R    + K +A +              LL  Y                        P
Sbjct: 119 LIFRVEKLNMKSKAGMGMVMGALICIGGALLLTMYKGVPLTKLRKLETHQLINNNHAMKP 178

Query: 153 DRWVLGSTLLAASSLSVCVWNIIQVGTIKQYPQVMKVVSFYSLAGTIQCSIFSLIMERNI 212
           + W++G  LL A S     W +IQ    ++YP         S  GTIQC++ SLI  R+I
Sbjct: 179 ENWIIGCVLLFAGSSCFGSWMLIQAKVNEKYPCQYSSTVVLSFFGTIQCALLSLIKSRDI 238

Query: 213 NAWKLKLNMELLLIIITAIFGSVIRSTVHVSCAEMKGHLYVPMFKPFGIVFATAF 267
            AW L   ++++ I+        I +     C   +G ++  +F P G++FAT F
Sbjct: 239 TAWILTDKLDIVTIVYAGAVAQGICTVGTSWCIRKRGPIFTSIFTPVGLIFATLF 293

Arabidopsis thaliana (taxid: 3702)

>sp|Q9FL41|WTR38_ARATH WAT1-related protein At5g07050 OS=Arabidopsis thaliana GN=At5g07050 PE=2 SV=1

 Score =  108 bits (270), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 77/296 (26%), Positives = 135/296 (45%), Gaps = 44/296 (14%)

Query: 14  PFTLMVIMEGCTIGLTIVTKTAMNGGMSPFVFIAYTNALGSILLLPYSFFFHHRGSEAQP 73
           P+  M+ ++    G+ I+TK ++N GMS +V + Y +A+ + ++ P++FFF  +   AQP
Sbjct: 18  PYFAMISLQFGYAGMNIITKISLNTGMSHYVLVVYRHAIATAVIAPFAFFFERK---AQP 74

Query: 74  LFTLPLMLRFFFLGLTGVAISQNLAFFGLYYSSPIVVCVMGLLIPAISFLLSIITRKAAS 133
             T  + ++ F LGL G  I QN  + GL Y+SP   C M  ++PA++F+L+++ R    
Sbjct: 75  KITFSIFMQLFILGLLGPVIDQNFYYMGLKYTSPTFSCAMSNMLPAMTFILAVLFRMEML 134

Query: 134 DDK---LEAKI--------NPPLLIFYSTP-----------------------------D 153
           D K    +AKI           L+  Y  P                              
Sbjct: 135 DLKKLWCQAKIAGTVVTVAGAMLMTIYKGPIVELFWTKYMHIQDSSHANTTSSKNSSSDK 194

Query: 154 RWVLGSTLLAASSLSVCVWNIIQVGTIKQYPQ-VMKVVSFYSLAGTIQCSIFSLIMERNI 212
            ++ GS LL  ++L+     ++Q   +K Y +  + + +     GT+Q    + +ME N 
Sbjct: 195 EFLKGSILLIFATLAWASLFVLQAKILKTYAKHQLSLTTLICFIGTLQAVAVTFVMEHNP 254

Query: 213 NAWKLKLNMELLLIIITAIFGSVIRSTVHVSCAEMKGHLYVPMFKPFGIVFATAFG 268
           +AW++  +M LL    + I  S I   V     + +G ++   F P  +V     G
Sbjct: 255 SAWRIGWDMNLLAAAYSGIVASSISYYVQGIVMKKRGPVFATAFSPLMMVIVAVMG 310

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	280
224111314	341	hypothetical protein POPTRDRAFT_231473 [	0.971	0.797	0.594	2e-98
297837513	373	hypothetical protein ARALYDRAFT_315326 [	0.992	0.745	0.522	5e-86
297841761	375	nodulin MtN21 family protein [Arabidopsi	0.967	0.722	0.530	2e-85
42563104	375	nodulin MtN21 /EamA-like transporter pro	0.967	0.722	0.527	2e-85
15218979	374	Nodulin MtN21 /EamA-like transporter fam	0.992	0.743	0.517	5e-85
147778660	360	hypothetical protein VITISV_034107 [Viti	0.95	0.738	0.508	3e-75
356515983	360	PREDICTED: auxin-induced protein 5NG4-li	0.960	0.747	0.491	1e-70
449435386	374	PREDICTED: auxin-induced protein 5NG4-li	0.996	0.745	0.501	7e-65
224135771	355	predicted protein [Populus trichocarpa]	0.946	0.746	0.375	8e-48
357477327	353	Auxin-induced protein 5NG4 [Medicago tru	0.95	0.753	0.369	1e-47

>gi|224111314|ref|XP_002315812.1| hypothetical protein POPTRDRAFT_231473 [Populus trichocarpa] gi|222864852|gb|EEF01983.1| hypothetical protein POPTRDRAFT_231473 [Populus trichocarpa]

 Score =  364 bits (934), Expect = 2e-98,   Method: Compositional matrix adjust.
 Identities = 185/311 (59%), Positives = 224/311 (72%), Gaps = 39/311 (12%)

Query: 6   GQMEEEMVPFTLMVIMEGCTIGLTIVTKTAMNGGMSPFVFIAYTNALGSILLLPYSFFFH 65
           G    E+ PFT+MVIMEGCTI LTI+ KT M+ GMSPFVF+ YTNALG+++LLPYSF +H
Sbjct: 4   GSKLGEVAPFTVMVIMEGCTIALTIMAKTVMSRGMSPFVFVVYTNALGTLILLPYSFLYH 63

Query: 66  HRGSEAQPLFTLPLMLRFFFLGLTGVAISQNLAFFGLYYSSPIVVCVMGLLIPAISFLLS 125
              +E QPLFTLP+ LRFFFLGLTG+A+SQNLAF GL YSSPIVVC MGLLIPA SF+LS
Sbjct: 64  RERAE-QPLFTLPVFLRFFFLGLTGIALSQNLAFVGLSYSSPIVVCAMGLLIPAFSFILS 122

Query: 126 IITRKA-------------------------------------ASDDKLEAKINPPLLIF 148
           ++ R++                                     +S  KL+      L +F
Sbjct: 123 VVLRRSKVEWRCSSFQFKVIGTLVSIMGAISVVIYKGPYIRPSSSSQKLQHS-EHQLFVF 181

Query: 149 YSTPDRWVLGSTLLAASSLSVCVWNIIQVGTIKQYPQVMKVVSFYSLAGTIQCSIFSLIM 208
           YS+PD W+LG  LLAAS   V +WNIIQ+GTIK YPQVMK+ SFYSLAGTIQC+IFSLI+
Sbjct: 182 YSSPDNWILGCMLLAASFFCVSLWNIIQLGTIKLYPQVMKIASFYSLAGTIQCAIFSLIV 241

Query: 209 ERNINAWKLKLNMELLLIIITAIFGSVIRSTVHVSCAEMKGHLYVPMFKPFGIVFATAFG 268
           ER++NAWKL+LNMELLLI+ITAIFGSV+RS+V +SC  MKG  YVP+F+PF I +AT FG
Sbjct: 242 ERDLNAWKLRLNMELLLIVITAIFGSVVRSSVQISCTRMKGPFYVPLFQPFRIFWATFFG 301

Query: 269 LTFFTNSLHYG 279
           + FF N LHYG
Sbjct: 302 VGFFVNGLHYG 312

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297837513|ref|XP_002886638.1| hypothetical protein ARALYDRAFT_315326 [Arabidopsis lyrata subsp. lyrata] gi|297332479|gb|EFH62897.1| hypothetical protein ARALYDRAFT_315326 [Arabidopsis lyrata subsp. lyrata]

 Score =  323 bits (828), Expect = 5e-86,   Method: Compositional matrix adjust.
 Identities = 166/318 (52%), Positives = 214/318 (67%), Gaps = 40/318 (12%)

Query: 1   MGLVRGQMEEEMVPFTLMVIMEGCTIGLTIVTKTAMNGGMSPFVFIAYTNALGSILLLPY 60
           MGL+  + E  +VPFT+M +ME CTI LTI+ KT++ GGMSPFVFI YTNALGS+LLLPY
Sbjct: 1   MGLMDTRWET-IVPFTVMALMEACTIALTILAKTSLTGGMSPFVFIVYTNALGSLLLLPY 59

Query: 61  SFFFHHRGSEAQPLFTLPLMLRFFFLGLTGVAISQNLAFFGLYYSSPIVVCVMGLLIPAI 120
           SF+FH   S+ +P  T P ++R F LG TGV + QN+AF GL YSSPIVVC MGL  PA 
Sbjct: 60  SFYFHRDESDDEPFLTKPSLVRIFLLGFTGVFLFQNMAFLGLSYSSPIVVCAMGLQSPAF 119

Query: 121 SFLLSIITRKAA---SDDKLEAKINPPL-------------------------------- 145
           SFLLS+   +     +  + + ++   L                                
Sbjct: 120 SFLLSLARGEGGLGWASKRTKGRVIGTLICFTGAFVEVIYLGPFIRPSHPSSPNSNFLAT 179

Query: 146 ----LIFYSTPDRWVLGSTLLAASSLSVCVWNIIQVGTIKQYPQVMKVVSFYSLAGTIQC 201
               L F+   D WVLGS LLA ++LS+ +WNIIQ+ T+++YPQVMKVVS YSLAGT+QC
Sbjct: 180 ISHYLTFFKNSDNWVLGSLLLACATLSISIWNIIQLDTVQKYPQVMKVVSAYSLAGTLQC 239

Query: 202 SIFSLIMERNINAWKLKLNMELLLIIITAIFGSVIRSTVHVSCAEMKGHLYVPMFKPFGI 261
           +IFS  ME +++AWKLKLNM+L LII T IFGS+IR++V V C++MKG  YVP+FKPFGI
Sbjct: 240 AIFSAFMEPDLSAWKLKLNMDLYLIIATGIFGSIIRTSVQVKCSKMKGPYYVPLFKPFGI 299

Query: 262 VFATAFGLTFFTNSLHYG 279
           ++A+ FG +FF NSLHYG
Sbjct: 300 LWASIFGTSFFVNSLHYG 317

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297841761|ref|XP_002888762.1| nodulin MtN21 family protein [Arabidopsis lyrata subsp. lyrata] gi|297334603|gb|EFH65021.1| nodulin MtN21 family protein [Arabidopsis lyrata subsp. lyrata]

 Score =  322 bits (824), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 164/309 (53%), Positives = 202/309 (65%), Gaps = 38/309 (12%)

Query: 9   EEEMVPFTLMVIMEGCTIGLTIVTKTAMNGGMSPFVFIAYTNALGSILLLPYSFFFHHRG 68
             E+VPF  M IME CTI LTI+ KTA+ GGMSPFVF+ YTNA GSILLLP+S FFH   
Sbjct: 7   RNELVPFVAMAIMEACTIALTIMAKTALTGGMSPFVFVVYTNAFGSILLLPFSLFFHRNE 66

Query: 69  SEAQPLFTLPLMLRFFFLGLTGVAISQNLAFFGLYYSSPIVVCVMGLLIPAISFLLSIIT 128
              Q +F+ PL++R FFLG TG+ + QNLAF GL +SSPIVVC MGL IP+ SFLLSI+ 
Sbjct: 67  RTEQSIFSWPLLVRVFFLGFTGIFMFQNLAFVGLRFSSPIVVCAMGLQIPSFSFLLSILL 126

Query: 129 RKAASDDKLEA--------------------------------------KINPPLLIFYS 150
            K+  D +  +                                      K  P LL++Y+
Sbjct: 127 GKSKLDWRNTSTRAKLMGTIISLSGAFVEELYKGPFIRPASSASPTRFLKSVPKLLVYYN 186

Query: 151 TPDRWVLGSTLLAASSLSVCVWNIIQVGTIKQYPQVMKVVSFYSLAGTIQCSIFSLIMER 210
            PD W LG   LAA+  SV ++N+IQ GT+KQYP VMKV SFYS+ GTIQC IFSL ME 
Sbjct: 187 LPDNWFLGCIFLAAAVFSVSLFNVIQTGTVKQYPHVMKVASFYSIVGTIQCLIFSLFMES 246

Query: 211 NINAWKLKLNMELLLIIITAIFGSVIRSTVHVSCAEMKGHLYVPMFKPFGIVFATAFGLT 270
           +++AWK++ N +L LII T  FGSVIR++VHV C +MKG  YVP+FKPFGI +AT FG +
Sbjct: 247 DLSAWKIQPNFDLYLIIATGTFGSVIRTSVHVKCTQMKGPYYVPLFKPFGIFWATLFGTS 306

Query: 271 FFTNSLHYG 279
           FF NSLHYG
Sbjct: 307 FFVNSLHYG 315

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|42563104|ref|NP_177183.2| nodulin MtN21 /EamA-like transporter protein [Arabidopsis thaliana] gi|332196917|gb|AEE35038.1| nodulin MtN21 /EamA-like transporter protein [Arabidopsis thaliana]

 Score =  321 bits (823), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 163/309 (52%), Positives = 203/309 (65%), Gaps = 38/309 (12%)

Query: 9   EEEMVPFTLMVIMEGCTIGLTIVTKTAMNGGMSPFVFIAYTNALGSILLLPYSFFFHHRG 68
            +E+VPF  M IME CTI LTI+ KTA+ GGMSPFVF+ YTNA GSILLLP+SF FH   
Sbjct: 7   RDELVPFVAMAIMEACTIALTIMAKTALTGGMSPFVFVVYTNAFGSILLLPFSFLFHRNE 66

Query: 69  SEAQPLFTLPLMLRFFFLGLTGVAISQNLAFFGLYYSSPIVVCVMGLLIPAISFLLSIIT 128
              Q +F+ PL++R FFLG TG+ + QNLAF GL +SSPIVVC MGL IP+ SFLLSII 
Sbjct: 67  RTEQSIFSWPLLVRVFFLGFTGIFMFQNLAFVGLRFSSPIVVCAMGLQIPSFSFLLSIIL 126

Query: 129 -------RKAASDDKLEAKIN-------------------------------PPLLIFYS 150
                  R  ++  KL   I                                P LL++Y+
Sbjct: 127 GRSKLDWRNTSTRAKLMGTIVSLSGAFVEELYKGPFIRPASSASPNRFLKSVPKLLVYYN 186

Query: 151 TPDRWVLGSTLLAASSLSVCVWNIIQVGTIKQYPQVMKVVSFYSLAGTIQCSIFSLIMER 210
            PD W LG   LA +  SV ++N++Q GT+K+YP VMKV SFYS+ GTIQC +FSL MER
Sbjct: 187 LPDNWFLGCIFLAVAVFSVSLFNVVQTGTVKKYPHVMKVASFYSIVGTIQCLLFSLFMER 246

Query: 211 NINAWKLKLNMELLLIIITAIFGSVIRSTVHVSCAEMKGHLYVPMFKPFGIVFATAFGLT 270
           +++AWK++ N +L LII T  FGSVIR++VHV C +MKG  YVP+FKPFGI +AT FG +
Sbjct: 247 DLSAWKIQPNFDLYLIIATGTFGSVIRTSVHVKCTQMKGPYYVPLFKPFGIFWATLFGTS 306

Query: 271 FFTNSLHYG 279
           FF NSLHYG
Sbjct: 307 FFVNSLHYG 315

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15218979|ref|NP_176213.1| Nodulin MtN21 /EamA-like transporter family protein [Arabidopsis thaliana] gi|4249384|gb|AAD14481.1| Similar to gi|4056506 F3G5.25 nodulin-like protein from Arabidopsis thaliana BAC gb|AC005896 [Arabidopsis thaliana] gi|332195532|gb|AEE33653.1| Nodulin MtN21 /EamA-like transporter family protein [Arabidopsis thaliana]

 Score =  320 bits (820), Expect = 5e-85,   Method: Compositional matrix adjust.
 Identities = 165/319 (51%), Positives = 212/319 (66%), Gaps = 41/319 (12%)

Query: 1   MGLVRGQMEEEMVPFTLMVIMEGCTIGLTIVTKTAMNGGMSPFVFIAYTNALGSILLLPY 60
           MGL+  + E  +VPF +M +ME CTI LTI+ KTA+ GGMSPFVFI YTNALGS+LLLPY
Sbjct: 1   MGLMDTRWET-IVPFIVMALMEACTIALTILAKTALTGGMSPFVFIVYTNALGSLLLLPY 59

Query: 61  SFFFHHRGSEAQPLFTLPLMLRFFFLGLTGVAISQNLAFFGLYYSSPIVVCVMGLLIPAI 120
           SF+FH   S+ +P  T P ++R F LG TGV + QN+AF GL YSSPIVVC MGL  PA 
Sbjct: 60  SFYFHRDESDDEPFLTKPSLVRIFLLGFTGVFLFQNMAFLGLSYSSPIVVCAMGLQSPAF 119

Query: 121 SFLLSIITRKAA----SDDKLEAKINPPL------------------------------- 145
           SFLLS+   K      +  + + ++   L                               
Sbjct: 120 SFLLSLALGKEGGLGWASKRTKGRVIGTLICFTGAFVEVIYLGPFIRPSPPSSPTSNFLT 179

Query: 146 -----LIFYSTPDRWVLGSTLLAASSLSVCVWNIIQVGTIKQYPQVMKVVSFYSLAGTIQ 200
                L F+   D W LGS LLA ++LS+ +WNIIQ+ T+++YPQVMKVVS YSLAGT+Q
Sbjct: 180 TISHYLTFFKNSDNWALGSLLLACATLSISIWNIIQLDTVQKYPQVMKVVSAYSLAGTLQ 239

Query: 201 CSIFSLIMERNINAWKLKLNMELLLIIITAIFGSVIRSTVHVSCAEMKGHLYVPMFKPFG 260
           C+IFS  ME +++AW+LKLNM+L LII T IFGS+IR++V V C++MKG  YVP+FKPFG
Sbjct: 240 CAIFSAFMEPDLSAWELKLNMDLYLIIATGIFGSIIRTSVQVKCSKMKGPYYVPLFKPFG 299

Query: 261 IVFATAFGLTFFTNSLHYG 279
           I++A+ FG +FF NSLHYG
Sbjct: 300 ILWASIFGTSFFVNSLHYG 318

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147778660|emb|CAN71720.1| hypothetical protein VITISV_034107 [Vitis vinifera]

 Score =  287 bits (735), Expect = 3e-75,   Method: Compositional matrix adjust.
 Identities = 156/307 (50%), Positives = 197/307 (64%), Gaps = 41/307 (13%)

Query: 11  EMVPFTLMVIMEGCTIGLTIVTKTAMNGGMSPFVFIAYTNALGSILLLPYSFFFHHRGSE 70
           E++PF++MV+MEGCT+GLTI+TKT M  GMS FVF+ Y+NAL SI+LLPYS  F      
Sbjct: 9   EVIPFSVMVLMEGCTVGLTIMTKTVMAKGMSQFVFVVYSNALSSIILLPYSLIFRR---T 65

Query: 71  AQPLFTLPLMLRFFFLGLTGVAISQNLAFFGLYYSSPIVVCVMGLLIPAISFLLSIITRK 130
            Q  FT PL+ RFFFLGLTG+ I+Q  AF GL YSSPI+ C MG LIPA SF+L+II R 
Sbjct: 66  QQSFFTFPLLTRFFFLGLTGITIAQIFAFTGLSYSSPILACGMGNLIPAFSFVLAIILRT 125

Query: 131 AASDDKL---EAKI-----------------------------------NPPLLIFYSTP 152
              D ++   +AKI                                    P   IF STP
Sbjct: 126 TKLDWRVTSGQAKIIGTFISISGGTLMILYKGPLVRKTAFSAPFHHLELIPRHFIFSSTP 185

Query: 153 DRWVLGSTLLAASSLSVCVWNIIQVGTIKQYPQVMKVVSFYSLAGTIQCSIFSLIMERNI 212
           + W LG  LLA +SLS  VW IIQVGT+KQYP+ + + + Y+  GTIQ +I + + ERN+
Sbjct: 186 EYWALGGILLAVASLSASVWGIIQVGTVKQYPEPITIAALYTSMGTIQSAIVAFVAERNL 245

Query: 213 NAWKLKLNMELLLIIITAIFGSVIRSTVHVSCAEMKGHLYVPMFKPFGIVFATAFGLTFF 272
           +AWKL+LNMELLLI ++AIFGS IR +VH+ C   KG  YVPMFKPFGI+ A+   + FF
Sbjct: 246 SAWKLELNMELLLIFLSAIFGSAIRCSVHIWCMHNKGPFYVPMFKPFGIIIASIASVIFF 305

Query: 273 TNSLHYG 279
            +SLHYG
Sbjct: 306 GDSLHYG 312

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356515983|ref|XP_003526676.1| PREDICTED: auxin-induced protein 5NG4-like [Glycine max]

 Score =  272 bits (696), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 149/303 (49%), Positives = 189/303 (62%), Gaps = 34/303 (11%)

Query: 11  EMVPFTLMVIMEGCTIGLTIVTKTAMNGGMSPFVFIAYTNALGSILLLPYSFFFHHRGSE 70
           E++PF +MVIMEG TIGLTI  KTA+  GMSPFVFI YTNAL +I+L P  F  H    +
Sbjct: 9   EVLPFIVMVIMEGWTIGLTIFAKTAITNGMSPFVFIVYTNALATIILFPCFFLPHQEDRK 68

Query: 71  AQPLFTLPLMLRFFFLGLTGVAISQNLAFFGLYYSSPIVVCVMGLLIPAISFLLSIITRK 130
            +P FT  L +RF FLG  G+ ++Q   F GL YSSPI+VC M  LIP  +FLLS+I RK
Sbjct: 69  ERPSFTFSLFMRFLFLGFIGMTMTQAFLFLGLSYSSPILVCAMSHLIPTFNFLLSLILRK 128

Query: 131 AASDDK-------------------LEAKINPPL---------------LIFYSTPDRWV 156
              + +                   L      PL               L+F STP+ WV
Sbjct: 129 TELNLRSPGIQVQVIGILVSIMGAVLAEFFKGPLVRPSSHHLRHTDKQYLVFSSTPEFWV 188

Query: 157 LGSTLLAASSLSVCVWNIIQVGTIKQYPQVMKVVSFYSLAGTIQCSIFSLIMERNINAWK 216
           LG  LLAA+S SV + N IQ  T+KQYP+ MK++S+ SL GTI  +I S I+ER+INAWK
Sbjct: 189 LGGALLAAASFSVSISNFIQKETLKQYPEPMKLLSYSSLLGTILSAIVSGIVERDINAWK 248

Query: 217 LKLNMELLLIIITAIFGSVIRSTVHVSCAEMKGHLYVPMFKPFGIVFATAFGLTFFTNSL 276
           +K N +++LI++TA+ G VIR  + V    MKG LYVP+FKPFGI FAT F + FF+NSL
Sbjct: 249 IKRNKDVILIVLTALVGGVIRPNIQVWFTRMKGPLYVPLFKPFGIAFATTFAVCFFSNSL 308

Query: 277 HYG 279
           HYG
Sbjct: 309 HYG 311

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449435386|ref|XP_004135476.1| PREDICTED: auxin-induced protein 5NG4-like [Cucumis sativus] gi|449529704|ref|XP_004171838.1| PREDICTED: auxin-induced protein 5NG4-like [Cucumis sativus]

 Score =  253 bits (646), Expect = 7e-65,   Method: Compositional matrix adjust.
 Identities = 159/317 (50%), Positives = 199/317 (62%), Gaps = 38/317 (11%)

Query: 1   MGLVRGQMEEEMVPFTLMVIMEGCTIGLTIVTKTAMNGGMSPFVFIAYTNALGSILLLPY 60
           M +  G + E +VPF  MV MEGCTI LTI+ KTA+  GMS FVF+ YTNA+ SI+LLPY
Sbjct: 3   MEVKGGGILEMVVPFLAMVTMEGCTIALTILAKTAITYGMSTFVFVVYTNAVASIILLPY 62

Query: 61  SFFFHH--RGSEAQPLFTLPLMLRFFFLGLTGVAISQNLAFFGLYYSSPIVVCVMGLLIP 118
           SF FH+  R    Q LF+ PL+LR F LGLTG+ ISQNLAF GL YSSPIVVC MGL++P
Sbjct: 63  SFIFHYNQRLEFQQSLFSFPLLLRVFLLGLTGICISQNLAFLGLSYSSPIVVCAMGLMLP 122

Query: 119 AISFLLSIITRKAASDDK--------------------LEAKINP--------------- 143
           AISFLLSI+  K   + K                     E  + P               
Sbjct: 123 AISFLLSILLGKTKMEWKNPNFITKVVGTVISVVGATCEEVYLGPTVRQHPSSSTHLQFK 182

Query: 144 -PLLIFYSTPDRWVLGSTLLAASSLSVCVWNIIQVGTIKQYPQVMKVVSFYSLAGTIQCS 202
             LL+F ST DRW+ G  LLAA++L V +WNIIQ+G +KQY QVMKV SFYS+ GT   +
Sbjct: 183 QKLLVFTSTTDRWIFGGLLLAAATLCVSIWNIIQLGVVKQYSQVMKVGSFYSIVGTFMSA 242

Query: 203 IFSLIMERNINAWKLKLNMELLLIIITAIFGSVIRSTVHVSCAEMKGHLYVPMFKPFGIV 262
           I +  +  + +AW +K + +L LII T  F  +IR+ V + C + KG  YVPMFKPFGI+
Sbjct: 243 IVAYFVVNDSSAWTVKSSFDLYLIIATGTFSGLIRNRVQIWCMQKKGPYYVPMFKPFGIL 302

Query: 263 FATAFGLTFFTNSLHYG 279
           FAT FG TFF ++ HYG
Sbjct: 303 FATFFGATFFGDTFHYG 319

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224135771|ref|XP_002322156.1| predicted protein [Populus trichocarpa] gi|222869152|gb|EEF06283.1| predicted protein [Populus trichocarpa]

 Score =  196 bits (499), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 113/301 (37%), Positives = 165/301 (54%), Gaps = 36/301 (11%)

Query: 11  EMVPFTLMVIMEGCTIGLTIVTKTAMNGGMSPFVFIAYTNALGSILLLPYSFFFHHRGSE 70
            ++PF  MV++E   +GLT ++K AM+ GMS FVF+ Y+NAL +++LLP   F+  +   
Sbjct: 9   NLLPFAAMVMVECLDVGLTTLSKAAMSKGMSQFVFVVYSNALATLILLPSLIFYRTK--- 65

Query: 71  AQPLFTLPLMLRFFFLGLTGVAISQNLAFFGLYYSSPIVVCVMGLLIPAISFLLSIITR- 129
            +P  T  L+ +FF L L G+ + QN  F G+ YSSP +   MG LIPA +FLL++I R 
Sbjct: 66  -RPPVTYSLLCKFFLLSLVGITLMQNCVFTGVSYSSPTLASAMGQLIPAFTFLLAVIFRM 124

Query: 130 ------------------------------KAASDDKLEAKINP-PLLIFYSTPDRWVLG 158
                                         K  +   +  + NP P+    ST + W++G
Sbjct: 125 EKLDWRSSRSRIKIMGTLVSVSGALTITLYKGPAIGAITTQSNPDPIPSIMSTANSWIIG 184

Query: 159 STLLAASSLSVCVWNIIQVGTIKQYPQVMKVVSFYSLAGTIQCSIFSLIMERNINAWKLK 218
              L  + L V ++  +Q   +K+YP  M +VSF  L GTIQ SI SLI ERN NAWKL+
Sbjct: 185 GLFLVTADLCVSIFTTLQAAILKEYPSEMAMVSFLCLFGTIQSSIVSLIAERNPNAWKLR 244

Query: 219 LNMELLLIIITAIFGSVIRSTVHVSCAEMKGHLYVPMFKPFGIVFATAFGLTFFTNSLHY 278
            ++EL+ II +A+ GSV+   V   C   KG ++V +FKP GI  A   G+ F  ++LH 
Sbjct: 245 PDIELISIIYSAVVGSVVTFGVTAWCIRKKGPVFVAIFKPVGIATAAFLGVIFLGDTLHV 304

Query: 279 G 279
           G
Sbjct: 305 G 305

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357477327|ref|XP_003608949.1| Auxin-induced protein 5NG4 [Medicago truncatula] gi|355510004|gb|AES91146.1| Auxin-induced protein 5NG4 [Medicago truncatula]

 Score =  195 bits (496), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 112/303 (36%), Positives = 167/303 (55%), Gaps = 37/303 (12%)

Query: 11  EMVPFTLMVIMEGCTIGLTIVTKTAMN-GGMSPFVFIAYTNALGSILLLPYSFFFHHRGS 69
           E +PF  MVI+E   +GLT ++K AM+  GM+ F+F+ Y+NAL + +LLP S+F  +R +
Sbjct: 9   ECIPFAAMVIVECLDVGLTTLSKEAMSTKGMNHFIFVLYSNALATFILLP-SYFLINRTT 67

Query: 70  EAQPLFTLPLMLRFFFLGLTGVAISQNLAFFGLYYSSPIVVCVMGLLIPAISFLLSIITR 129
             +P  +  L+ +FFFLGL G+ I QN  F G+ YSSP +   M  L PAI+F+L++I R
Sbjct: 68  --RPPLSFSLLAKFFFLGLVGITIMQNCVFTGISYSSPTLGSAMSNLTPAITFVLAVIFR 125

Query: 130 KAASDD---------------------------------KLEAKINPPLLIFYSTPDRWV 156
               D                                  + +   + P     +    WV
Sbjct: 126 MEKLDAGSSISQIKIVGTVVSISGALIVTFYKGAPISSIQTQPSTSQPFWSLLAETSNWV 185

Query: 157 LGSTLLAASSLSVCVWNIIQVGTIKQYPQVMKVVSFYSLAGTIQCSIFSLIMERNINAWK 216
           +G   LA +SLS+ +WNI Q   ++ YP  + +V+FY L GTIQC++ SLI+ ++ NAW 
Sbjct: 186 IGGLFLATASLSLAIWNIAQAEILRGYPSQLTIVAFYCLFGTIQCALLSLIVVKDPNAWN 245

Query: 217 LKLNMELLLIIITAIFGSVIRSTVHVSCAEMKGHLYVPMFKPFGIVFATAFGLTFFTNSL 276
           L L++EL+ II +AIFGS +  +V   C + KG ++V MFKP GI  A    + F   +L
Sbjct: 246 LSLDIELIAIIYSAIFGSAVTFSVLTWCIDRKGPVFVTMFKPVGIAIAAFMSVAFLGETL 305

Query: 277 HYG 279
           H G
Sbjct: 306 HVG 308

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	280
TAIR|locus:2020688	375	UMAMIT36 "AT1G70260" [Arabidop	0.528	0.394	0.530	2.2e-82
TAIR|locus:2202745	374	UMAMIT35 "AT1G60050" [Arabidop	0.478	0.358	0.567	8.3e-81
TAIR|locus:2091363	367	UMAMIT41 "AT3G28050" [Arabidop	0.503	0.384	0.349	6.6e-37
TAIR|locus:2130344	347	UMAMIT38 "AT4G15540" [Arabidop	0.489	0.394	0.292	7.5e-29
TAIR|locus:2169414	402	UMAMIT9 "Usually multiple acid	0.446	0.310	0.358	1.3e-27
TAIR|locus:2102629	377	UMAMIT10 "Usually multiple aci	0.439	0.326	0.333	3.3e-27
TAIR|locus:2092702	383	UMAMIT4 "AT3G18200" [Arabidops	0.435	0.318	0.328	3.4e-27
TAIR|locus:2012255	374	UMAMIT25 "Usually multiple aci	0.425	0.318	0.352	1e-26
TAIR|locus:2173752	370	UMAMIT37 "AT5G40230" [Arabidop	0.617	0.467	0.270	1.7e-26
TAIR|locus:2173737	339	UMAMIT42 "Usually multiple aci	0.921	0.761	0.281	7.6e-25

TAIR|locus:2020688 UMAMIT36 "AT1G70260" [Arabidopsis thaliana (taxid:3702)]

 Score = 438 (159.2 bits), Expect = 2.2e-82, Sum P(2) = 2.2e-82
 Identities = 79/149 (53%), Positives = 106/149 (71%)

Query:   131 AASDDKLEAKINPPLLIFYSTPDRWVXXXXXXXXXXXXVCVWNIIQVGTIKQYPQVMKVV 190
             +AS ++    + P LL++Y+ PD W             V ++N++Q GT+K+YP VMKV 
Sbjct:   168 SASPNRFLKSV-PKLLVYYNLPDNWFLGCIFLAVAVFSVSLFNVVQTGTVKKYPHVMKVA 226

Query:   191 SFYSLAGTIQCSIFSLIMERNINAWKLKLNMELLLIIITAIFGSVIRSTVHVSCAEMKGH 250
             SFYS+ GTIQC +FSL MER+++AWK++ N +L LII T  FGSVIR++VHV C +MKG 
Sbjct:   227 SFYSIVGTIQCLLFSLFMERDLSAWKIQPNFDLYLIIATGTFGSVIRTSVHVKCTQMKGP 286

Query:   251 LYVPMFKPFGIVFATAFGLTFFTNSLHYG 279
              YVP+FKPFGI +AT FG +FF NSLHYG
Sbjct:   287 YYVPLFKPFGIFWATLFGTSFFVNSLHYG 315

GO:0003674 "molecular_function" evidence=ND

GO:0016020 "membrane" evidence=IEA;ISS

TAIR|locus:2202745 UMAMIT35 "AT1G60050" [Arabidopsis thaliana (taxid:3702)]

 Score = 426 (155.0 bits), Expect = 8.3e-81, Sum P(2) = 8.3e-81
 Identities = 76/134 (56%), Positives = 100/134 (74%)

Query:   146 LIFYSTPDRWVXXXXXXXXXXXXVCVWNIIQVGTIKQYPQVMKVVSFYSLAGTIQCSIFS 205
             L F+   D W             + +WNIIQ+ T+++YPQVMKVVS YSLAGT+QC+IFS
Sbjct:   185 LTFFKNSDNWALGSLLLACATLSISIWNIIQLDTVQKYPQVMKVVSAYSLAGTLQCAIFS 244

Query:   206 LIMERNINAWKLKLNMELLLIIITAIFGSVIRSTVHVSCAEMKGHLYVPMFKPFGIVFAT 265
               ME +++AW+LKLNM+L LII T IFGS+IR++V V C++MKG  YVP+FKPFGI++A+
Sbjct:   245 AFMEPDLSAWELKLNMDLYLIIATGIFGSIIRTSVQVKCSKMKGPYYVPLFKPFGILWAS 304

Query:   266 AFGLTFFTNSLHYG 279
              FG +FF NSLHYG
Sbjct:   305 IFGTSFFVNSLHYG 318

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0016020 "membrane" evidence=IEA;ISS

TAIR|locus:2091363 UMAMIT41 "AT3G28050" [Arabidopsis thaliana (taxid:3702)]

 Score = 230 (86.0 bits), Expect = 6.6e-37, Sum P(2) = 6.6e-37
 Identities = 50/143 (34%), Positives = 76/143 (53%)

Query:   139 AKINPPL-LIFYSTPDRWVXXXXXXXXXXXXVCVWNIIQVGTIKQYPQVMKVVSFYSLAG 197
             AK  P + L   ST   W+            V +W I+Q   +++YP    VV FYS+  
Sbjct:   162 AKSPPSVSLRSQSTNPNWILGAGFLAVEYFCVPLWYIVQTQIMREYPAEFTVVCFYSIGV 221

Query:   198 TIQCSIFSLIMERN-INAWKLKLNMELLLIIITAIFGSVIRSTVHVSCAEMKGHLYVPMF 256
             +   ++ +L  E N + AWK+K N+ L+ I+ + +FGS I +T+H     +KG L+V MF
Sbjct:   222 SFWTALVTLFTEGNDLGAWKIKPNIALVSIVCSGLFGSCINNTIHTWALRIKGPLFVAMF 281

Query:   257 KPFGIVFATAFGLTFFTNSLHYG 279
             KP  I  A A G+ F  +SL+ G
Sbjct:   282 KPLSIAIAVAMGVIFLRDSLYIG 304

GO:0008150 "biological_process" evidence=ND

GO:0016020 "membrane" evidence=IEA;ISS

TAIR|locus:2130344 UMAMIT38 "AT4G15540" [Arabidopsis thaliana (taxid:3702)]

 Score = 196 (74.1 bits), Expect = 7.5e-29, Sum P(2) = 7.5e-29
 Identities = 41/140 (29%), Positives = 70/140 (50%)

Query:   143 PPLLI---FYSTPDRWVXXXXXXXXXXXXVCVWNIIQVGTIKQYPQVMKVVSFYSLAGTI 199
             P LL+   F S    W+            + VW I+Q   ++ YP+ + VV  Y+L  T+
Sbjct:   163 PKLLVAASFTSFESSWIIGGLLLGLQFLLLSVWFILQTHIMEIYPEEIAVVFCYNLCATL 222

Query:   200 QCSIFSLIMERNINAWKLKLNMELLLIIITAIFGSVIRSTVHVSCAEMKGHLYVPMFKPF 259
                   L++E+++N+W+LK    L  +I + +F + + S +H     +KG +Y+ +FKP 
Sbjct:   223 ISGTVCLLVEKDLNSWQLKPGFSLASVIYSGLFDTSLGSVIHTWGLHVKGPVYISLFKPL 282

Query:   260 GIVFATAFGLTFFTNSLHYG 279
              I  A A    F  ++LH G
Sbjct:   283 SIAIAVAMAAIFLGDTLHLG 302

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0016020 "membrane" evidence=IEA

TAIR|locus:2169414 UMAMIT9 "Usually multiple acids move in and out Transporters 9" [Arabidopsis thaliana (taxid:3702)]

 Score = 233 (87.1 bits), Expect = 1.3e-27, Sum P(2) = 1.3e-27
 Identities = 47/131 (35%), Positives = 79/131 (60%)

Query:    14 PFTLMVIMEGCTIGLTIVTKTAMNGGMSPFVFIAYTNALGSILLLPYSFFFHHRGSEAQP 73
             P+  M+ ++    G+ I+TK ++N GMS +V + Y +A+ + ++ P++FFF  +   AQP
Sbjct:    18 PYFAMISLQFGYAGMNIITKISLNTGMSHYVLVVYRHAIATAVIAPFAFFFERK---AQP 74

Query:    74 LFTLPLMLRFFFLGLTGVAISQNLAFFGLYYSSPIVVCVMGLLIPAISFLLSIITRKAAS 133
               T  + ++ F LGL G  I QN  + GL Y+SP   C M  ++PA++F+L+++ R    
Sbjct:    75 KITFSIFMQLFILGLLGPVIDQNFYYMGLKYTSPTFSCAMSNMLPAMTFILAVLFRMEML 134

Query:   134 D-DKL--EAKI 141
             D  KL  +AKI
Sbjct:   135 DLKKLWCQAKI 145

GO:0009507 "chloroplast" evidence=ISM

GO:0016020 "membrane" evidence=IEA;ISS

TAIR|locus:2102629 UMAMIT10 "Usually multiple acids move in and out Transporters 10" [Arabidopsis thaliana (taxid:3702)]

 Score = 197 (74.4 bits), Expect = 3.3e-27, Sum P(2) = 3.3e-27
 Identities = 43/129 (33%), Positives = 71/129 (55%)

Query:     1 MGLVRGQMEEEMVPFTLMVIMEGCTIGLTIVTKTAMNGGMSPFVFIAYTNALGSILLLPY 60
             MGL   +M E   P+  MV ++    G+ +VTK  ++ GMS +V +AY NA  +  + P+
Sbjct:     1 MGL---KMSESAKPYFAMVCLQFGYAGMNLVTKVVLDRGMSHYVLVAYRNAFATAAIAPF 57

Query:    61 SFFFHHRGSEAQPLFTLPLMLRFFFLGLTGVAISQNLAFFGLYYSSPIVVCVMGLLIPAI 120
             +     +    +P  T P+ ++ F L L G  I QNL + GL  +SP     +  ++PA+
Sbjct:    58 ALLSERK---VRPKMTFPIFMQIFVLALLGPLIDQNLYYAGLKLTSPTFAGAVTNIVPAL 114

Query:   121 SFLLSIITR 129
             +F++SII R
Sbjct:   115 TFIISIICR 123

GO:0016020 "membrane" evidence=IEA

TAIR|locus:2092702 UMAMIT4 "AT3G18200" [Arabidopsis thaliana (taxid:3702)]

 Score = 201 (75.8 bits), Expect = 3.4e-27, Sum P(2) = 3.4e-27
 Identities = 41/125 (32%), Positives = 72/125 (57%)

Query:     5 RGQMEEEMVPFTLMVIMEGCTIGLTIVTKTAMNGGMSPFVFIAYTNALGSILLLPYSFFF 64
             +G + E++     ++ ++ C  G  IV++ A+N G+S  V+  Y N L  +L+ P+++FF
Sbjct:    26 KGVVSEKVKLVVALITLQFCFAGFHIVSRVALNIGVSKVVYPVYRNLLALLLIGPFAYFF 85

Query:    65 HHRGSEAQPLFTLPLMLRFFFLGLTGVAISQNLAFFGLYYSSPIVVCVMGLLIPAISFLL 124
               +  E  PL T+ L+ +FFFL L G+  +Q     GLYY++P     M   +PAI+F++
Sbjct:    86 EKK--ERPPL-TISLLAQFFFLALIGITANQGFYLLGLYYATPTFASAMQNSVPAITFIM 142

Query:   125 SIITR 129
             +   R
Sbjct:   143 ACALR 147

GO:0003674 "molecular_function" evidence=ND

GO:0009507 "chloroplast" evidence=ISM

GO:0016020 "membrane" evidence=IEA

TAIR|locus:2012255 UMAMIT25 "Usually multiple acids move in and out Transporters 25" [Arabidopsis thaliana (taxid:3702)]

 Score = 215 (80.7 bits), Expect = 1.0e-26, Sum P(2) = 1.0e-26
 Identities = 43/122 (35%), Positives = 70/122 (57%)

Query:     9 EEEMVPFTLMVIMEGCTIGLTIVTKTAMNGGMSPFVFIAYTNALGSILLLPYSFFFHHRG 68
             + +M+PF  MV+++    G+ I +K AM  GM P + +AY     +I   P +FF   + 
Sbjct:     3 KSDMLPFLAMVLVQIGYAGMNITSKMAMEAGMKPLILVAYRQIFATIATFPVAFFLERK- 61

Query:    69 SEAQPLFTLPLMLRFFFLGLTGVAISQNLAFFGLYYSSPIVVCVMGLLIPAISFLLSIIT 128
                +P  TL ++++ FF  +TG   +Q L F GL  SSP + C +  L+PA++FLL+ I 
Sbjct:    62 --TRPKITLRILVQVFFCSITGATGNQVLYFVGLQNSSPTIACALTNLLPAVTFLLAAIF 119

Query:   129 RK 130
             R+
Sbjct:   120 RQ 121

GO:0016020 "membrane" evidence=IEA;ISS

TAIR|locus:2173752 UMAMIT37 "AT5G40230" [Arabidopsis thaliana (taxid:3702)]

 Score = 179 (68.1 bits), Expect = 1.7e-26, Sum P(2) = 1.7e-26
 Identities = 49/181 (27%), Positives = 85/181 (46%)

Query:   105 SSPIVVCVMGLLIPAISFLLSIITRKAASDDKLEAKINPP--LLIFY----STPDRWVXX 158
             SS     ++G ++ +IS  L +I  K       +A + PP   +  Y    S    W+  
Sbjct:   141 SSATQAKIIGTIV-SISGALVVILYKGPKV-LTDASLTPPSPTISLYQHLTSFDSSWIIG 198

Query:   159 XXXXXXXXXXVCVWNIIQVGTIKQYPQVMKVVSFYSLAGTIQCSIFSLIMERNINAWKLK 218
                       V VW I+Q   ++ YP+ + VV  Y+L  T+  +   L  E+++N++ LK
Sbjct:   199 GLLLATQYLLVSVWYILQTRVMELYPEEITVVFLYNLCATLISAPVCLFAEKDLNSFILK 258

Query:   219 LNMELLLIIITAIFGSVIRSTVHVSCAEMKGHLYVPMFKPFGIVFATAFGLTFFTNSLHY 278
               + L  ++ +    S   S +H     +KG +Y+ +FKP  IV A A G+ F  ++L+ 
Sbjct:   259 PGVSLASVMYSGGLVSSFGSVIHTWGLHLKGPVYISLFKPLSIVIAVAMGVMFLGDALYL 318

Query:   279 G 279
             G
Sbjct:   319 G 319

GO:0003674 "molecular_function" evidence=ND

GO:0016020 "membrane" evidence=IEA;ISS

TAIR|locus:2173737 UMAMIT42 "Usually multiple acids move in and out Transporters 42" [Arabidopsis thaliana (taxid:3702)]

 Score = 283 (104.7 bits), Expect = 7.6e-25, P = 7.6e-25
 Identities = 80/284 (28%), Positives = 133/284 (46%)

Query:    16 TLMVIMEGCTIGLTIVTKTAMNGGMSPFVFIAYTNALGSILLLPYSFFFHHRGSEAQPLF 75
             T MV+ E   +G+  + K A + G+SPFV + Y+   GS+LLLP +FF     S + P  
Sbjct:    15 TAMVVTEFSNVGVNTLVKAATSKGLSPFVVLVYSYTFGSLLLLPLTFFSFR--SRSLPPL 72

Query:    76 TLPLMLRFFFLGLTGVAISQNLAFFGLYYSSPIVVCVMGLLIPAISFLLSIITR------ 129
             T  ++     LGL   A  Q L + G+ YSSP +   M  + PA +F+L+++ R      
Sbjct:    73 TFSILCNMGILGLIASAF-QILGYNGIKYSSPTLSSAMSNVNPAFTFILAVVFRMENISL 131

Query:   130 -KAASDDKLEAKI------------NPPLLIFYSTPDRWVXXXXXXXXXXXXVCVWNIIQ 176
              K +S  K+   I            + P+L+  S+   W+            V V  ++ 
Sbjct:   132 GKKSSVAKVLGTILSIIGALVVTLYHGPMLM--SSHSDWIIGGGLLALQYILVSVSYLVM 189

Query:   177 VGTIKQYPQVMKVVSFYSLAGTIQCSIFSLIMER-NINAWKLKLNMELLLIIITAIFGSV 235
               T+ +YP  + V   +++   + C+  SL+ E+ N  AW ++ ++ L+ ++ T I  S 
Sbjct:   190 AHTMGRYPSAVVVTLVHNVCIAVVCAFVSLLAEKDNPKAWVIRFDITLITVVATGILNSG 249

Query:   236 IRSTVHVSCAEMKGHLYVPMFKPFGIVFATAFGLTFFTNSLHYG 279
                 +H      KG +Y+ MFKP  I+ A      F   SL+ G
Sbjct:   250 YY-VIHTWAVSHKGPVYLSMFKPLSILIAAVSTFIFLGESLYLG 292

GO:0016020 "membrane" evidence=IEA

GO:0006863 "purine nucleobase transport" evidence=RCA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
F4I5D5	WTR11_ARATH	No assigned EC number	0.5275	0.9678	0.7226	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	280
PLN00411	358	PLN00411, PLN00411, nodulin MtN21 family protein;	3e-24
pfam00892	126	pfam00892, EamA, EamA-like transporter family	0.002

>gnl|CDD|177805 PLN00411, PLN00411, nodulin MtN21 family protein; Provisional

 Score = 99.6 bits (248), Expect = 3e-24
 Identities = 84/305 (27%), Positives = 144/305 (47%), Gaps = 40/305 (13%)

Query: 11  EMVPFTLMVIMEGCTIGLTIVTKTAMNGGMSPFVFIAYTNALGSILLLPYSFFFHHRGSE 70
           E V  T M+  E   +G++ + K A + G++ + F+ Y+  L S+LLLP S FF +R   
Sbjct: 11  EAVFLTAMLATETSVVGISTLFKVATSKGLNIYPFLGYSYLLASLLLLP-SLFFTNRSRS 69

Query: 71  AQPLFTLPLMLRFFFLGLTGVAISQNLAFFGLYYSSPIVVCVMGLLIPAISFLLSIITR- 129
             PL ++ ++ +   LG  G ++     + G+ YS+P +   +  + PA++F+L+II R 
Sbjct: 70  LPPL-SVSILSKIGLLGFLG-SMYVITGYIGIEYSNPTLASAISNITPALTFILAIIFRM 127

Query: 130 ------KAASDDKLEAKI---------------------NPPLLIF-------YSTPDRW 155
                 + +S  K+   I                     +PP L F        S+   W
Sbjct: 128 EKVSFKERSSVAKVMGTILSLIGALVVIFYHGPRVFVASSPPYLNFRQLSPPLSSSNSDW 187

Query: 156 VLGSTLLAASSLSVCVWNIIQVGTIKQYPQVMKVVSFYSLAGTIQCSIFSLIMER-NINA 214
           ++G  LL    + V V  I+Q   + +YP    V   Y++  +I  S+  L++E+ N + 
Sbjct: 188 LIGGALLTIQGIFVSVSFILQAHIMSEYPAAFTVSFLYTVCVSIVTSMIGLVVEKNNPSV 247

Query: 215 WKLKLNMELLLIIITAIFGSVIRSTVHVSCAEMKGHLYVPMFKPFGIVFATAFGLTFFTN 274
           W +  ++ L+ I+  AI  SV    +H      KG LY+ +FKP  I+ A   G  F  +
Sbjct: 248 WIIHFDITLITIVTMAIITSVY-YVIHSWTVRHKGPLYLAIFKPLSILIAVVMGAIFLND 306

Query: 275 SLHYG 279
           SL+ G
Sbjct: 307 SLYLG 311

Length = 358

>gnl|CDD|216178 pfam00892, EamA, EamA-like transporter family

 Score = 37.2 bits (87), Expect = 0.002
 Identities = 29/101 (28%), Positives = 44/101 (43%), Gaps = 4/101 (3%)

Query: 27  GLTIVTKTAMNGGMSPFVFIAYTNALGSILLLPYSFFFHHRGSEAQPLFTLPLMLRFFFL 86
            L  V    +   +SP  F AY   +  ILL+   F       +   L +L  +L   +L
Sbjct: 4   ALYFVFSKKLLERISPLTFTAYRFLIAGILLILLLFLLR----KPFALLSLKAILALLYL 59

Query: 87  GLTGVAISQNLAFFGLYYSSPIVVCVMGLLIPAISFLLSII 127
           GL G A+   L F+ L Y S     V+  L P  + +LS++
Sbjct: 60  GLFGTALGYLLYFYALKYVSASNASVITSLSPVFTLILSVL 100

This family includes many hypothetical membrane proteins of unknown function. Many of the proteins contain two copies of the aligned region. The family used to be known as DUF6. Length = 126

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	280
PLN00411	358	nodulin MtN21 family protein; Provisional	100.0
PRK11272	292	putative DMT superfamily transporter inner membran	100.0
PRK11453	299	O-acetylserine/cysteine export protein; Provisiona	99.97
PRK10532	293	threonine and homoserine efflux system; Provisiona	99.97
PRK11689	295	aromatic amino acid exporter; Provisional	99.97
TIGR00950	260	2A78 Carboxylate/Amino Acid/Amine Transporter.	99.97
PRK15430	296	putative chloramphenical resistance permease RarD;	99.97
TIGR00688	256	rarD rarD protein. This uncharacterized protein is	99.95
TIGR00817	302	tpt Tpt phosphate/phosphoenolpyruvate translocator	99.93
TIGR03340	281	phn_DUF6 phosphonate utilization associated putati	99.93
PTZ00343	350	triose or hexose phosphate/phosphate translocator;	99.91
COG0697	292	RhaT Permeases of the drug/metabolite transporter	99.89
COG5006	292	rhtA Threonine/homoserine efflux transporter [Amin	99.83
TIGR00776	290	RhaT RhaT L-rhamnose-proton symporter family prote	99.82
PF06027	334	DUF914: Eukaryotic protein of unknown function (DU	99.8
COG2962	293	RarD Predicted permeases [General function predict	99.74
KOG4510	346	consensus Permease of the drug/metabolite transpor	99.72
PF08449	303	UAA: UAA transporter family; InterPro: IPR013657 T	99.48
PF00892	126	EamA: EamA-like transporter family; InterPro: IPR0	99.38
COG2510	140	Predicted membrane protein [Function unknown]	99.33
KOG2765	416	consensus Predicted membrane protein [Function unk	99.33
COG2510	140	Predicted membrane protein [Function unknown]	99.21
PF00892	126	EamA: EamA-like transporter family; InterPro: IPR0	99.21
KOG1441	316	consensus Glucose-6-phosphate/phosphate and phosph	99.18
TIGR00950	260	2A78 Carboxylate/Amino Acid/Amine Transporter.	99.15
PF04142	244	Nuc_sug_transp: Nucleotide-sugar transporter; Inte	98.99
PF13536	113	EmrE: Multidrug resistance efflux transporter	98.91
PRK10532	293	threonine and homoserine efflux system; Provisiona	98.77
PRK11272	292	putative DMT superfamily transporter inner membran	98.75
PRK15430	296	putative chloramphenical resistance permease RarD;	98.72
KOG1444	314	consensus Nucleotide-sugar transporter VRG4/SQV-7	98.7
KOG2234	345	consensus Predicted UDP-galactose transporter [Car	98.66
KOG1581	327	consensus UDP-galactose transporter related protei	98.66
KOG2766	336	consensus Predicted membrane protein [Function unk	98.62
TIGR03340	281	phn_DUF6 phosphonate utilization associated putati	98.6
TIGR00688	256	rarD rarD protein. This uncharacterized protein is	98.6
PRK11689	295	aromatic amino acid exporter; Provisional	98.43
KOG1443	349	consensus Predicted integral membrane protein [Fun	98.41
PF03151	153	TPT: Triose-phosphate Transporter family; InterPro	98.41
PLN00411	358	nodulin MtN21 family protein; Provisional	98.31
PF06800	269	Sugar_transport: Sugar transport protein; InterPro	98.27
PRK11453	299	O-acetylserine/cysteine export protein; Provisiona	98.23
KOG1442	347	consensus GDP-fucose transporter [Carbohydrate tra	98.18
KOG1580	337	consensus UDP-galactose transporter related protei	98.18
TIGR00817	302	tpt Tpt phosphate/phosphoenolpyruvate translocator	98.17
PF03151	153	TPT: Triose-phosphate Transporter family; InterPro	98.06
PTZ00343	350	triose or hexose phosphate/phosphate translocator;	97.97
COG0697	292	RhaT Permeases of the drug/metabolite transporter	97.94
PRK02971	129	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	97.8
TIGR00776	290	RhaT RhaT L-rhamnose-proton symporter family prote	97.75
PRK13499	345	rhamnose-proton symporter; Provisional	97.7
PF13536	113	EmrE: Multidrug resistance efflux transporter	97.69
KOG3912	372	consensus Predicted integral membrane protein [Gen	97.53
COG5070	309	VRG4 Nucleotide-sugar transporter [Carbohydrate tr	97.45
COG2962	293	RarD Predicted permeases [General function predict	97.42
PRK15051	111	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	97.35
PRK15051	111	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	97.3
KOG4314	290	consensus Predicted carbohydrate/phosphate translo	97.25
PF06027	334	DUF914: Eukaryotic protein of unknown function (DU	97.09
PF05653	300	Mg_trans_NIPA: Magnesium transporter NIPA; InterPr	97.06
COG5006	292	rhtA Threonine/homoserine efflux transporter [Amin	96.98
TIGR00803	222	nst UDP-galactose transporter. NSTs generally appe	96.93
KOG1582	367	consensus UDP-galactose transporter related protei	96.73
PRK02971	129	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	96.49
PF06800	269	Sugar_transport: Sugar transport protein; InterPro	96.34
KOG4510	346	consensus Permease of the drug/metabolite transpor	96.06
KOG2922	335	consensus Uncharacterized conserved protein [Funct	95.59
COG4975	288	GlcU Putative glucose uptake permease [Carbohydrat	95.53
PF00893	93	Multi_Drug_Res: Small Multidrug Resistance protein	94.79
PF08449	303	UAA: UAA transporter family; InterPro: IPR013657 T	94.51
PF00893	93	Multi_Drug_Res: Small Multidrug Resistance protein	93.22
PF04657	138	DUF606: Protein of unknown function, DUF606; Inter	93.16
PF05653	300	Mg_trans_NIPA: Magnesium transporter NIPA; InterPr	92.16
PF04657	138	DUF606: Protein of unknown function, DUF606; Inter	90.72
PRK13499	345	rhamnose-proton symporter; Provisional	90.47
KOG1441	316	consensus Glucose-6-phosphate/phosphate and phosph	89.79
PRK09541	110	emrE multidrug efflux protein; Reviewed	88.36
PRK10452	120	multidrug efflux system protein MdtJ; Provisional	87.76
KOG1583	330	consensus UDP-N-acetylglucosamine transporter [Car	87.43
PF10639	113	UPF0546: Uncharacterised protein family UPF0546; I	86.87
PRK10650	109	multidrug efflux system protein MdtI; Provisional	86.82
PRK10452	120	multidrug efflux system protein MdtJ; Provisional	86.48
PRK09541	110	emrE multidrug efflux protein; Reviewed	85.58
KOG1444	314	consensus Nucleotide-sugar transporter VRG4/SQV-7	81.72
KOG2765	416	consensus Predicted membrane protein [Function unk	81.2
COG2076	106	EmrE Membrane transporters of cations and cationic	80.99
PRK10650	109	multidrug efflux system protein MdtI; Provisional	80.72
PRK11431	105	multidrug efflux system protein; Provisional	80.33

>PLN00411 nodulin MtN21 family protein; Provisional

Probab=100.00  E-value=8.6e-35  Score=260.65  Aligned_cols=267  Identities=28%  Similarity=0.513  Sum_probs=215.5

Q ss_pred             cchhhHHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHhhhcccCCCCCCCCCHHHHHHHHHHHH
Q 041987            9 EEEMVPFTLMVIMEGCTIGLTIVTKTAMNGGMSPFVFIAYTNALGSILLLPYSFFFHHRGSEAQPLFTLPLMLRFFFLGL   88 (280)
Q Consensus         9 ~~~~~~~l~~~~~~~~wg~~~~~~k~~~~~~~~p~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl   88 (280)
                      +++.|+++.|+.+.++.+...++.|.+++.|++|..+.++|+.+|+++++++.+.+ +|+++. ++.+++++.++.+.|+
T Consensus         9 ~~~~~~~~~~~~~q~~~~~~~~~~k~a~~~G~~~~~~~~~R~~iA~l~Ll~~~~~~-~~~~~~-~~~~~~~~~~l~l~g~   86 (358)
T PLN00411          9 RREAVFLTAMLATETSVVGISTLFKVATSKGLNIYPFLGYSYLLASLLLLPSLFFT-NRSRSL-PPLSVSILSKIGLLGF   86 (358)
T ss_pred             hhccchHHHHHHHHHHHHHHHHHHHHHHHCCCCccHHHHHHHHHHHHHHHHHHHHH-HHhccc-CcchHHHHHHHHHHHH
Confidence            34688999999999999999999999999999999999999999999999988765 443221 4556888899999999


Q ss_pred             HHHHHHHHHHHHHhhccchhHHHHhhhhhHHHHHHHHHHh------hccccCCc---ce-------eeeCC-CCCC----
Q 041987           89 TGVAISQNLAFFGLYYSSPIVVCVMGLLIPAISFLLSIIT------RKAASDDK---LE-------AKINP-PLLI----  147 (280)
Q Consensus        89 ~g~~~~~~~~~~~l~~~~~~~a~vi~~~~P~~~~il~~i~------~~ek~~~~---g~-------~ii~~-~~~~----  147 (280)
                      ++ +.++.+++.|++|+++++++++.+++|++++++++++      +|||++++   |+       .++.. ....    
T Consensus        87 ~g-~~~~~~~~~gl~~tsa~~asll~~~~P~~~~lla~~~~~e~~~~~er~~~~~~~G~~l~~~Gv~ll~~~~g~~~~~~  165 (358)
T PLN00411         87 LG-SMYVITGYIGIEYSNPTLASAISNITPALTFILAIIFRMEKVSFKERSSVAKVMGTILSLIGALVVIFYHGPRVFVA  165 (358)
T ss_pred             HH-HHHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHHhchhhhcccccHHHHHHHHHHHHHHHHHHHccCcccccc
Confidence            98 5778899999999999999999999999999999999      58999887   32       22211 1000    


Q ss_pred             --------------CCCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCchHHHHHHHHHHHHHHHHHHHhhccc-c
Q 041987          148 --------------FYSTPDRWVLGSTLLAASSLSVCVWNIIQVGTIKQYPQVMKVVSFYSLAGTIQCSIFSLIMERN-I  212 (280)
Q Consensus       148 --------------~~~~~~~~~~G~~~~l~aa~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~  212 (280)
                                    ...+..+...|+++.++++++||+|++++|+..+++++....+.+++.++++...+..+..+++ .
T Consensus       166 ~~~~~~~~~~~~~~~~~~~~~~~lG~~l~l~aa~~wa~~~il~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~l~~~~~~~  245 (358)
T PLN00411        166 SSPPYLNFRQLSPPLSSSNSDWLIGGALLTIQGIFVSVSFILQAHIMSEYPAAFTVSFLYTVCVSIVTSMIGLVVEKNNP  245 (358)
T ss_pred             cccccccccccccccCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHhHHHHHHHHHHHHHHHHHHHHHccCCc
Confidence                          0011123356999999999999999999999988887455778888888888887776665432 2


Q ss_pred             cccccchhhHHHHHHHHHHHHHHHHHHHHHhhhhccCcceeccccchHHHHHHHHHHHHhcCccccC
Q 041987          213 NAWKLKLNMELLLIIITAIFGSVIRSTVHVSCAEMKGHLYVPMFKPFGIVFATAFGLTFFTNSLHYG  279 (280)
Q Consensus       213 ~~~~~~~~~~~~~~~~~g~~~t~~~~~~~~~a~~~~~~~~~s~~~~l~pv~a~~l~~~~l~E~it~~  279 (280)
                      ..|....+.....++|.+++ +.++|.+|++++|+.||+++|++.+++|++++++|++++||++++.
T Consensus       246 ~~~~~~~~~~~~~i~y~~i~-t~lay~lw~~~v~~~ga~~as~~~~L~PV~a~llg~l~LgE~lt~~  311 (358)
T PLN00411        246 SVWIIHFDITLITIVTMAII-TSVYYVIHSWTVRHKGPLYLAIFKPLSILIAVVMGAIFLNDSLYLG  311 (358)
T ss_pred             ccceeccchHHHHHHHHHHH-HHHHHHHHHHHHhccCchHHHHHHhHHHHHHHHHHHHHhCCCCcHH
Confidence            23322222335567788875 6689999999999999999999999999999999999999999975

>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional

Probab=100.00  E-value=5e-31  Score=231.79  Aligned_cols=250  Identities=16%  Similarity=0.087  Sum_probs=201.3

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHhhhcccCCCCCCCCCHHHHHHHHHHHHHHHH
Q 041987           13 VPFTLMVIMEGCTIGLTIVTKTAMNGGMSPFVFIAYTNALGSILLLPYSFFFHHRGSEAQPLFTLPLMLRFFFLGLTGVA   92 (280)
Q Consensus        13 ~~~l~~~~~~~~wg~~~~~~k~~~~~~~~p~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~g~~   92 (280)
                      .-.+.+++..++||++++++|.+.++ +||.+++++|+.+++++++++...+ ++  +   +.+++++.+....|.++..
T Consensus         8 ~~~~~~~~~~~iWg~~~~~~K~~~~~-~~p~~~~~~R~~~a~l~ll~~~~~~-~~--~---~~~~~~~~~~~~~g~~~~~   80 (292)
T PRK11272          8 PLFGALFALYIIWGSTYLVIRIGVES-WPPLMMAGVRFLIAGILLLAFLLLR-GH--P---LPTLRQWLNAALIGLLLLA   80 (292)
T ss_pred             HHHHHHHHHHHHHhhHHHHHHHHhcc-CCHHHHHHHHHHHHHHHHHHHHHHh-CC--C---CCcHHHHHHHHHHHHHHHH
Confidence            34667888999999999999999885 9999999999999999998876543 22  2   1245667778888888766


Q ss_pred             HHHHHHHHHh-hccchhHHHHhhhhhHHHHHHHHHHhhccccCCc---ce-------eeeCCCCCCCCCCCchhHHHHHH
Q 041987           93 ISQNLAFFGL-YYSSPIVVCVMGLLIPAISFLLSIITRKAASDDK---LE-------AKINPPLLIFYSTPDRWVLGSTL  161 (280)
Q Consensus        93 ~~~~~~~~~l-~~~~~~~a~vi~~~~P~~~~il~~i~~~ek~~~~---g~-------~ii~~~~~~~~~~~~~~~~G~~~  161 (280)
                      .++.+++.+. ++++++.++++.++.|+++++++.+ +|||++++   |+       .++...     ++.+.+..|+.+
T Consensus        81 ~~~~~~~~~~~~~~~a~~a~~l~~~~Pl~~~lla~~-~~e~~~~~~~~~~~la~~Gv~ll~~~-----~~~~~~~~G~l~  154 (292)
T PRK11272         81 VGNGMVTVAEHQNVPSGIAAVVVATVPLFTLCFSRL-FGIRTRKLEWLGIAIGLAGIVLLNSG-----GNLSGNPWGAIL  154 (292)
T ss_pred             HHHHHHHHHHHccCcHHHHHHHHHHHHHHHHHHHHH-hcccCchhHHHHHHHHHHhHHHHhcC-----cccccchHHHHH
Confidence            7788899999 9999999999999999999999986 69999998   32       112111     112234579999


Q ss_pred             HHHHHHHHHHHHHHHHhhhhcCCCchHHHHHHHHHHHHHHHHHHHhhcccccccccchhhHHHHHHHHHHHHHHHHHHHH
Q 041987          162 LAASSLSVCVWNIIQVGTIKQYPQVMKVVSFYSLAGTIQCSIFSLIMERNINAWKLKLNMELLLIIITAIFGSVIRSTVH  241 (280)
Q Consensus       162 ~l~aa~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~t~~~~~~~  241 (280)
                      .++++++||.+.+..||..++ + +...+.+++.++++.+.+.....+.+.  ...++...|..+++.++++++++|.+|
T Consensus       155 ~l~a~~~~a~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~i~~l~i~~s~~~~~l~  230 (292)
T PRK11272        155 ILIASASWAFGSVWSSRLPLP-V-GMMAGAAEMLAAGVVLLIASLLSGERL--TALPTLSGFLALGYLAVFGSIIAISAY  230 (292)
T ss_pred             HHHHHHHHHHHHHHHHhcCCC-c-chHHHHHHHHHHHHHHHHHHHHcCCcc--cccCCHHHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999999987543 2 456677888888888877765443321  111233468888999999999999999


Q ss_pred             HhhhhccCcceeccccchHHHHHHHHHHHHhcCccccC
Q 041987          242 VSCAEMKGHLYVPMFKPFGIVFATAFGLTFFTNSLHYG  279 (280)
Q Consensus       242 ~~a~~~~~~~~~s~~~~l~pv~a~~l~~~~l~E~it~~  279 (280)
                      ++++|+.++++++.+.++||+++.+++++++||++|+.
T Consensus       231 ~~~~~~~~~~~~s~~~~l~Pi~a~i~~~~~l~E~~t~~  268 (292)
T PRK11272        231 MYLLRNVRPALATSYAYVNPVVAVLLGTGLGGETLSPI  268 (292)
T ss_pred             HHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCCcHH
Confidence            99999999999999999999999999999999999864

>PRK11453 O-acetylserine/cysteine export protein; Provisional

Probab=99.97  E-value=6.7e-30  Score=225.34  Aligned_cols=250  Identities=14%  Similarity=0.060  Sum_probs=186.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHhhhcccCCCCCCCCCHHHHHHHHHHHHHHHHH
Q 041987           14 PFTLMVIMEGCTIGLTIVTKTAMNGGMSPFVFIAYTNALGSILLLPYSFFFHHRGSEAQPLFTLPLMLRFFFLGLTGVAI   93 (280)
Q Consensus        14 ~~l~~~~~~~~wg~~~~~~k~~~~~~~~p~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~g~~~   93 (280)
                      ..+..++++++||++++++|.++++ +||.++.++|+.++++.++++.    .++     |.+++   .....|+.....
T Consensus         5 ~~l~~l~~~~~Wg~~~~~~k~~~~~-~~p~~~~~~R~~~a~~~l~~~~----~~~-----~~~~~---~~~~~g~~~~~~   71 (299)
T PRK11453          5 DGVLALLVVVVWGLNFVVIKVGLHN-MPPLMLAGLRFMLVAFPAIFFV----ARP-----KVPLN---LLLGYGLTISFG   71 (299)
T ss_pred             HHHHHHHHHHHHhhhHHHHHHHHhc-CCHHHHHHHHHHHHHHHHHHHh----cCC-----CCchH---HHHHHHHHHHHH
Confidence            3456889999999999999999987 9999999999999887766543    121     12222   233345554445


Q ss_pred             HHHHHHHHhhc-cchhHHHHhhhhhHHHHHHHHHHhhccccCCc---ce-------eeeCCCCCCCCCCCchhHHHHHHH
Q 041987           94 SQNLAFFGLYY-SSPIVVCVMGLLIPAISFLLSIITRKAASDDK---LE-------AKINPPLLIFYSTPDRWVLGSTLL  162 (280)
Q Consensus        94 ~~~~~~~~l~~-~~~~~a~vi~~~~P~~~~il~~i~~~ek~~~~---g~-------~ii~~~~~~~~~~~~~~~~G~~~~  162 (280)
                      ++.+++.+++| .+++.++++.+++|+++.+++++++|||++++   |+       .++...   ..++.+.+..|+.++
T Consensus        72 ~~~~~~~~~~~~~~a~~a~~l~~~~pi~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~ll~~~---~~~~~~~~~~G~~l~  148 (299)
T PRK11453         72 QFAFLFCAINFGMPAGLASLVLQAQAFFTIVLGAFTFGERLQGKQLAGIALAIFGVLVLIED---SLNGQHVAMLGFMLT  148 (299)
T ss_pred             HHHHHHHHHHhcCCHHHHHHHHHhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHhHHHhccc---cCCCcchhHHHHHHH
Confidence            56678899998 58899999999999999999999999999998   22       222211   111222335799999


Q ss_pred             HHHHHHHHHHHHHHHhhhhcCCCc--hHHHHHHHHHHHHHHHHHHHhhcccc---cccccchhhHHHHHHHHHHHHHHHH
Q 041987          163 AASSLSVCVWNIIQVGTIKQYPQV--MKVVSFYSLAGTIQCSIFSLIMERNI---NAWKLKLNMELLLIIITAIFGSVIR  237 (280)
Q Consensus       163 l~aa~~~a~~~v~~~~~~~~~~~~--~~~~~~~~~~~~i~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~g~~~t~~~  237 (280)
                      +.++++|+.|++++|+..++.+++  .....++...+.+.........+++.   .++...+...|..++|+++++|+++
T Consensus       149 l~aal~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~i~~t~~~  228 (299)
T PRK11453        149 LAAAFSWACGNIFNKKIMSHSTRPAVMSLVVWSALIPIIPFFVASLILDGSATMIHSLVTIDMTTILSLMYLAFVATIVG  228 (299)
T ss_pred             HHHHHHHHHHHHHHHHHhcccCccchhHHHHHHHHHHHHHHHHHHHHhcCchhhhhhhccCCHHHHHHHHHHHHHHHHHH
Confidence            999999999999999986654422  23344555555554444443333321   1122223346889999999999999


Q ss_pred             HHHHHhhhhccCcceeccccchHHHHHHHHHHHHhcCccccC
Q 041987          238 STVHVSCAEMKGHLYVPMFKPFGIVFATAFGLTFFTNSLHYG  279 (280)
Q Consensus       238 ~~~~~~a~~~~~~~~~s~~~~l~pv~a~~l~~~~l~E~it~~  279 (280)
                      |.+|++++|+.++++++.+.++||+++.+++++++||++++.
T Consensus       229 ~~l~~~~l~~~~a~~~s~~~~l~Pv~a~~~~~l~lgE~~~~~  270 (299)
T PRK11453        229 YGIWGTLLGRYETWRVAPLSLLVPVVGLASAALLLDERLTGL  270 (299)
T ss_pred             HHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhCCCccHH
Confidence            999999999999999999999999999999999999999874

>PRK10532 threonine and homoserine efflux system; Provisional

Probab=99.97  E-value=4.8e-30  Score=225.63  Aligned_cols=251  Identities=13%  Similarity=0.043  Sum_probs=195.5

Q ss_pred             cccchhhHHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHhhhcccCCCCCCCCCHHHHHHHHHH
Q 041987            7 QMEEEMVPFTLMVIMEGCTIGLTIVTKTAMNGGMSPFVFIAYTNALGSILLLPYSFFFHHRGSEAQPLFTLPLMLRFFFL   86 (280)
Q Consensus         7 ~~~~~~~~~l~~~~~~~~wg~~~~~~k~~~~~~~~p~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (280)
                      +..++.+++.++++++++|+.++.++|.+.++ .||.++.++|+.++.++++++...   ++    ++.++|++......
T Consensus         6 ~~~~~~~~~~~~~la~~~~~~~~~~~K~~~~~-~~~~~~~~~R~~~a~l~l~~~~~~---~~----~~~~~~~~~~~~~~   77 (293)
T PRK10532          6 RKLPVWLPILLLLIAMASIQSGASLAKSLFPL-VGAPGVTALRLALGTLILIAIFKP---WR----LRFAKEQRLPLLFY   77 (293)
T ss_pred             cccccchHHHHHHHHHHHHHhhHHHHHHHHHH-cCHHHHHHHHHHHHHHHHHHHHhH---Hh----ccCCHHHHHHHHHH
Confidence            34567889999999999999999999999987 999999999999999998876422   11    12345666777777


Q ss_pred             HHHHHHHHHHHHHHHhhccchhHHHHhhhhhHHHHHHHHHHhhccccCCc--------ceeeeCCCCCCCCCCCchhHHH
Q 041987           87 GLTGVAISQNLAFFGLYYSSPIVVCVMGLLIPAISFLLSIITRKAASDDK--------LEAKINPPLLIFYSTPDRWVLG  158 (280)
Q Consensus        87 gl~g~~~~~~~~~~~l~~~~~~~a~vi~~~~P~~~~il~~i~~~ek~~~~--------g~~ii~~~~~~~~~~~~~~~~G  158 (280)
                      |++. ...+.++++|++|++++.++++.++.|+++++++.    ||+++.        |+.++....   .+.++.+..|
T Consensus        78 g~~~-~~~~~~~~~al~~~~~~~a~~l~~t~Pi~~~ll~~----~~~~~~~~~~i~~~Gv~li~~~~---~~~~~~~~~G  149 (293)
T PRK10532         78 GVSL-GGMNYLFYLSIQTVPLGIAVALEFTGPLAVALFSS----RRPVDFVWVVLAVLGLWFLLPLG---QDVSHVDLTG  149 (293)
T ss_pred             HHHH-HHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHhc----CChHHHHHHHHHHHHHheeeecC---CCcccCChHH
Confidence            8765 46778899999999999999999999999988763    454444        222222111   1122334679


Q ss_pred             HHHHHHHHHHHHHHHHHHHhhhhcCCCchHHHHHHHHHHHHHHHHHHHhhcccccccccchhhHHHHHHHHHHHHHHHHH
Q 041987          159 STLLAASSLSVCVWNIIQVGTIKQYPQVMKVVSFYSLAGTIQCSIFSLIMERNINAWKLKLNMELLLIIITAIFGSVIRS  238 (280)
Q Consensus       159 ~~~~l~aa~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~t~~~~  238 (280)
                      +++.++++++||.|.+..|+..++.+ +... .++..++++.+.+.....+.   .... +...+...+++|+++|+++|
T Consensus       150 ~ll~l~aa~~~a~~~v~~r~~~~~~~-~~~~-~~~~~~~~~~l~~~~~~~~~---~~~~-~~~~~~~~l~lgv~~t~~~~  223 (293)
T PRK10532        150 AALALGAGACWAIYILSGQRAGAEHG-PATV-AIGSLIAALIFVPIGALQAG---EALW-HWSILPLGLAVAILSTALPY  223 (293)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhccCC-chHH-HHHHHHHHHHHHHHHHHccC---cccC-CHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999877765 6555 46667777777776654332   1111 22235566799999999999


Q ss_pred             HHHHhhhhccCcceeccccchHHHHHHHHHHHHhcCccccC
Q 041987          239 TVHVSCAEMKGHLYVPMFKPFGIVFATAFGLTFFTNSLHYG  279 (280)
Q Consensus       239 ~~~~~a~~~~~~~~~s~~~~l~pv~a~~l~~~~l~E~it~~  279 (280)
                      .+|++++|+.+++++|++.++||+++.++|++++||+++..
T Consensus       224 ~l~~~~~~~~~a~~as~~~~l~Pv~a~l~~~l~lgE~~~~~  264 (293)
T PRK10532        224 SLEMIALTRLPTRTFGTLMSMEPALAAVSGMIFLGETLTLI  264 (293)
T ss_pred             HHHHHHHHhcChhHHHHHHHhHHHHHHHHHHHHhCCCCcHH
Confidence            99999999999999999999999999999999999999864

>PRK11689 aromatic amino acid exporter; Provisional

Probab=99.97  E-value=2.9e-30  Score=227.25  Aligned_cols=250  Identities=10%  Similarity=0.003  Sum_probs=183.8

Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHhhhcccCCCCCCCCCHHHHHHHHHHHHHH
Q 041987           11 EMVPFTLMVIMEGCTIGLTIVTKTAMNGGMSPFVFIAYTNALGSILLLPYSFFFHHRGSEAQPLFTLPLMLRFFFLGLTG   90 (280)
Q Consensus        11 ~~~~~l~~~~~~~~wg~~~~~~k~~~~~~~~p~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~g   90 (280)
                      +.++++.++.+.++||++++.+|.+.++ ++|..+.++|+.++.++++++.    ++++.  ++.+++    ....+.++
T Consensus         2 ~~~~~l~~l~a~~~Wg~~~~~~k~~~~~-~~P~~~~~~R~~~a~l~l~~~~----~~~~~--~~~~~~----~~~~~~l~   70 (295)
T PRK11689          2 SQKATLIGLIAILLWSTMVGLIRGVSES-LGPVGGAAMIYSVSGLLLLLTV----GFPRL--RQFPKR----YLLAGGLL   70 (295)
T ss_pred             CcchhHHHHHHHHHHHHHHHHHHHHHcc-CChHHHHHHHHHHHHHHHHHHc----ccccc--ccccHH----HHHHHhHH
Confidence            4678889999999999999999999987 9999999999999999988763    22111  222322    23344445


Q ss_pred             HHHHHHHHHHHhhc----cchhHHHHhhhhhHHHHHHHHHHhhccccCCc---ce-------eeeCCCCCCCC-----CC
Q 041987           91 VAISQNLAFFGLYY----SSPIVVCVMGLLIPAISFLLSIITRKAASDDK---LE-------AKINPPLLIFY-----ST  151 (280)
Q Consensus        91 ~~~~~~~~~~~l~~----~~~~~a~vi~~~~P~~~~il~~i~~~ek~~~~---g~-------~ii~~~~~~~~-----~~  151 (280)
                      ...+..+++.|++|    +++++++++.+++|+++.+++++++|||++++   |+       .++.....+..     ++
T Consensus        71 ~~~~~~~~~~a~~~~~~~~~a~~a~~l~~~~Pi~~~ll~~~~~~e~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~  150 (295)
T PRK11689         71 FVSYEICLALSLGYANTRRQAIEVGMVNYLWPSLTILFAVLFNGQKANWLLIPGLLLALAGVAWVLGGDNGLSLAELINN  150 (295)
T ss_pred             HHHHHHHHHHHHHHhhccccchHHHHHHHHhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhHhheecCCccchhhhhhhc
Confidence            55677777878764    57888999999999999999999999999988   22       23322111000     01


Q ss_pred             CchhHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCchHHHHHHHHHHHHHHHHHHHhhcccccccccchhhHHHHHHHHHH
Q 041987          152 PDRWVLGSTLLAASSLSVCVWNIIQVGTIKQYPQVMKVVSFYSLAGTIQCSIFSLIMERNINAWKLKLNMELLLIIITAI  231 (280)
Q Consensus       152 ~~~~~~G~~~~l~aa~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~  231 (280)
                      ..+...|+.+++.|+++||.|+++.||..++.+ +....   ...+++.+.+.....+.+  ..+ .+...|..+++.++
T Consensus       151 ~~~~~~G~~~~l~aa~~~A~~~v~~k~~~~~~~-~~~~~---~~~~~~~l~~~~~~~~~~--~~~-~~~~~~~~l~~~~~  223 (295)
T PRK11689        151 IASNPLSYGLAFIGAFIWAAYCNVTRKYARGKN-GITLF---FILTALALWIKYFLSPQP--AMV-FSLPAIIKLLLAAA  223 (295)
T ss_pred             cccChHHHHHHHHHHHHHHHHHHHHhhccCCCC-chhHH---HHHHHHHHHHHHHHhcCc--ccc-CCHHHHHHHHHHHH
Confidence            122356999999999999999999999877765 64432   223333333333332211  111 22345777778885


Q ss_pred             HHHHHHHHHHHhhhhccCcceeccccchHHHHHHHHHHHHhcCccccC
Q 041987          232 FGSVIRSTVHVSCAEMKGHLYVPMFKPFGIVFATAFGLTFFTNSLHYG  279 (280)
Q Consensus       232 ~~t~~~~~~~~~a~~~~~~~~~s~~~~l~pv~a~~l~~~~l~E~it~~  279 (280)
                       +++++|.+|++++|+.++++++.+.++||+++.+++++++||++|+.
T Consensus       224 -~t~~~~~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~~~lgE~~~~~  270 (295)
T PRK11689        224 -AMGFGYAAWNVGILHGNMTLLATASYFTPVLSAALAALLLSTPLSFS  270 (295)
T ss_pred             -HHHHHHHHHHHHHHccCHHHHHHHHHhHHHHHHHHHHHHhCCCCcHH
Confidence             88999999999999999999999999999999999999999999864

>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter

Probab=99.97  E-value=2.6e-29  Score=217.04  Aligned_cols=240  Identities=15%  Similarity=0.139  Sum_probs=192.9

Q ss_pred             HHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHhhhcccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 041987           25 TIGLTIVTKTAMNGGMSPFVFIAYTNALGSILLLPYSFFFHHRGSEAQPLFTLPLMLRFFFLGLTGVAISQNLAFFGLYY  104 (280)
Q Consensus        25 wg~~~~~~k~~~~~~~~p~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~g~~~~~~~~~~~l~~  104 (280)
                      ||.++++.|.+++++.||.+..+.|++.+.+++.+...   .|  +     +++++.+....|.++..+++.++++|++|
T Consensus         1 Wg~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~---~~--~-----~~~~~~~~~~~~~~~~~l~~~~~~~a~~~   70 (260)
T TIGR00950         1 WGTTGVVIGQYLEGQVPLYFAVFRRLIFALLLLLPLLR---RR--P-----PLKRLLRLLLLGALQIGVFYVLYFVAVKR   70 (260)
T ss_pred             CcchHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHH---hc--c-----CHhHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            89999999999987799999999999999998877642   22  1     23345667788888878899999999999


Q ss_pred             cchhHHHHhhhhhHHHHHHHHHHhhccccCCc---ce--eeeCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHhh
Q 041987          105 SSPIVVCVMGLLIPAISFLLSIITRKAASDDK---LE--AKINPPLLIFYSTPDRWVLGSTLLAASSLSVCVWNIIQVGT  179 (280)
Q Consensus       105 ~~~~~a~vi~~~~P~~~~il~~i~~~ek~~~~---g~--~ii~~~~~~~~~~~~~~~~G~~~~l~aa~~~a~~~v~~~~~  179 (280)
                      +++++++++.++.|+++++++.+++|||++++   |+  ++++.......++.+.+..|+.+.++++++|+.+.+..|+.
T Consensus        71 ~~~~~~~ii~~~~P~~~~~~~~l~~~e~~~~~~~~gi~i~~~Gv~li~~~~~~~~~~~G~~~~l~a~~~~a~~~~~~k~~  150 (260)
T TIGR00950        71 LPVGEAALLLYLAPLYVTLLSDLMGKERPRKLVLLAAVLGLAGAVLLLSDGNLSINPAGLLLGLGSGISFALGTVLYKRL  150 (260)
T ss_pred             cChhhhHHHHhhhHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHhhccCCcccccHHHHHHHHHHHHHHHHHHHHHhHH
Confidence            99999999999999999999999999999988   33  11110000001123345689999999999999999999998


Q ss_pred             hhcCCCch--HHHHHHHHHHHHHHHHHHHhhcccccccccchhhHHHHHHHHHHHHHHHHHHHHHhhhhccCcceecccc
Q 041987          180 IKQYPQVM--KVVSFYSLAGTIQCSIFSLIMERNINAWKLKLNMELLLIIITAIFGSVIRSTVHVSCAEMKGHLYVPMFK  257 (280)
Q Consensus       180 ~~~~~~~~--~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~t~~~~~~~~~a~~~~~~~~~s~~~  257 (280)
                      .++.+ +.  ....+++.++.+.+.+.....+++   ... +...+..+++.++++++++|.+|++++|+.++++++.+.
T Consensus       151 ~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~---~~~-~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~s~~~  225 (260)
T TIGR00950       151 VKKEG-PELLQFTGWVLLLGALLLLPFAWFLGPN---PQA-LSLQWGALLYLGLIGTALAYFLWNKGLTLVDPSAASILA  225 (260)
T ss_pred             hhcCC-chHHHHHHHHHHHHHHHHHHHHHhcCCC---CCc-chHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHH
Confidence            87764 33  444467888888888877654432   111 334677788999999999999999999999999999999


Q ss_pred             chHHHHHHHHHHHHhcCccccC
Q 041987          258 PFGIVFATAFGLTFFTNSLHYG  279 (280)
Q Consensus       258 ~l~pv~a~~l~~~~l~E~it~~  279 (280)
                      +++|+++.+++++++||+++..
T Consensus       226 ~~~pv~~~ll~~~~~~E~~~~~  247 (260)
T TIGR00950       226 LAEPLVALLLGLLILGETLSLP  247 (260)
T ss_pred             HHHHHHHHHHHHHHhCCCCCHH
Confidence            9999999999999999999864

>PRK15430 putative chloramphenical resistance permease RarD; Provisional

Probab=99.97  E-value=5.4e-29  Score=219.22  Aligned_cols=255  Identities=7%  Similarity=-0.035  Sum_probs=181.7

Q ss_pred             cccchhhHHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHhhhcccCCCCCC-CCCHHHHHHHHH
Q 041987            7 QMEEEMVPFTLMVIMEGCTIGLTIVTKTAMNGGMSPFVFIAYTNALGSILLLPYSFFFHHRGSEAQP-LFTLPLMLRFFF   85 (280)
Q Consensus         7 ~~~~~~~~~l~~~~~~~~wg~~~~~~k~~~~~~~~p~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~-~~~~~~~~~~~~   85 (280)
                      +|+++.|+++++++++++||.+++.+|.. ++ ++|.++.++|+.++.+++.++...+ ++.+.... +.+++++.. ..
T Consensus         2 ~~~~~~~g~~~~l~a~~~wg~~~~~~k~~-~~-~~~~~~~~~R~~~a~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~-~~   77 (296)
T PRK15430          2 DAKQTRQGVLLALAAYFIWGIAPAYFKLI-YY-VPADEILTHRVIWSFFFMVVLMSIC-RQWSYLKTLIQTPQKIFM-LA   77 (296)
T ss_pred             CchhhhhHHHHHHHHHHHHHHHHHHHHHh-cC-CCHHHHHHHHHHHHHHHHHHHHHHH-ccHHHHHHHHcCHHHHHH-HH
Confidence            46678899999999999999999999986 54 9999999999999999887776543 22111000 113444333 33


Q ss_pred             HHHHHHHHHHHHHHHHhhccchhHHHHhhhhhHHHHHHHHHHhhccccCCc---ce-------eeeCCCCCCCCCCCchh
Q 041987           86 LGLTGVAISQNLAFFGLYYSSPIVVCVMGLLIPAISFLLSIITRKAASDDK---LE-------AKINPPLLIFYSTPDRW  155 (280)
Q Consensus        86 ~gl~g~~~~~~~~~~~l~~~~~~~a~vi~~~~P~~~~il~~i~~~ek~~~~---g~-------~ii~~~~~~~~~~~~~~  155 (280)
                      .+.++...++.++++|++|+++++++++.++.|+++++++++++|||++++   |+       .++...      .++. 
T Consensus        78 ~~~~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E~~~~~~~~g~~l~~~Gv~li~~~------~~~~-  150 (296)
T PRK15430         78 VSAVLIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGERFRRMQWLAVILAICGVLVQLWT------FGSL-  150 (296)
T ss_pred             HHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHH------cCCc-
Confidence            566666688999999999999999999999999999999999999999998   32       222111      1111 


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhhhcCC-CchHHHHHHHHHHHHHHHHHHHhhcccccccccchhhHHHHHHHHHHHHH
Q 041987          156 VLGSTLLAASSLSVCVWNIIQVGTIKQYP-QVMKVVSFYSLAGTIQCSIFSLIMERNINAWKLKLNMELLLIIITAIFGS  234 (280)
Q Consensus       156 ~~G~~~~l~aa~~~a~~~v~~~~~~~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~t  234 (280)
                         ..+.++++++||.|.+..|+..++.. +....+.+++..+.....+.   .+.+...+...+...+..+++.|+ .+
T Consensus       151 ---~~~~l~aa~~~a~~~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~g~-~t  223 (296)
T PRK15430        151 ---PIIALGLAFSFAFYGLVRKKIAVEAQTGMLIETMWLLPVAAIYLFAI---ADSSTSHMGQNPMSLNLLLIAAGI-VT  223 (296)
T ss_pred             ---cHHHHHHHHHHHHHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHHH---ccCCcccccCCcHHHHHHHHHHHH-HH
Confidence               14688899999999999988653321 12233444444444332221   111111111111112333444555 68


Q ss_pred             HHHHHHHHhhhhccCcceeccccchHHHHHHHHHHHHhcCccccC
Q 041987          235 VIRSTVHVSCAEMKGHLYVPMFKPFGIVFATAFGLTFFTNSLHYG  279 (280)
Q Consensus       235 ~~~~~~~~~a~~~~~~~~~s~~~~l~pv~a~~l~~~~l~E~it~~  279 (280)
                      .++|.+|++++|+.|++++|++.++||+++.++|++++||++++.
T Consensus       224 ~i~~~~~~~a~~~~~a~~~s~~~~l~Pv~a~~~g~l~l~E~~~~~  268 (296)
T PRK15430        224 TVPLLCFTAAATRLRLSTLGFFQYIGPTLMFLLAVTFYGEKPGAD  268 (296)
T ss_pred             HHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHcCCCCHH
Confidence            899999999999999999999999999999999999999999874

>TIGR00688 rarD rarD protein

Probab=99.95  E-value=1.1e-26  Score=200.48  Aligned_cols=239  Identities=10%  Similarity=-0.020  Sum_probs=169.2

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHhhhcccCC----CCCCCCCHH-HHHHHHHHH
Q 041987           13 VPFTLMVIMEGCTIGLTIVTKTAMNGGMSPFVFIAYTNALGSILLLPYSFFFHHRGS----EAQPLFTLP-LMLRFFFLG   87 (280)
Q Consensus        13 ~~~l~~~~~~~~wg~~~~~~k~~~~~~~~p~~~~~~R~~~a~l~l~~~~~~~~~~~~----~~~~~~~~~-~~~~~~~~g   87 (280)
                      |++..+++++++||.+++++|. .++ +||.+++++|++++++++.++...+ +|++    +. ++.+++ .+......|
T Consensus         2 ~g~~~~i~a~~~wg~~~~~~k~-~~~-~~~~~i~~~R~~~a~~~l~~~~~~~-~~~~~~~~~~-~~~~~~~~~~~~~~~g   77 (256)
T TIGR00688         2 KGIIVSLLASFLFGYMYYYSKL-LKP-LPATDILGHRMIWSFPFMLLSVTLF-RQWAALIERL-KRIQKRPLILSLLLCG   77 (256)
T ss_pred             CcHHHHHHHHHHHHHHHHHHHH-hcc-CCHHHHHHHHHHHHHHHHHHHHHHH-cchHHHHHHH-hCcccchHHHHHHHHH
Confidence            5889999999999999999998 454 9999999999999998887765443 3211    10 111222 244466666


Q ss_pred             HHHHHHHHHHHHHHhhccchhHHHHhhhhhHHHHHHHHHHhhccccCCc---ce-------eeeCCCCCCCCCCCchhHH
Q 041987           88 LTGVAISQNLAFFGLYYSSPIVVCVMGLLIPAISFLLSIITRKAASDDK---LE-------AKINPPLLIFYSTPDRWVL  157 (280)
Q Consensus        88 l~g~~~~~~~~~~~l~~~~~~~a~vi~~~~P~~~~il~~i~~~ek~~~~---g~-------~ii~~~~~~~~~~~~~~~~  157 (280)
                      .+. ..++.++++|++|+++++++++.++.|+++++++++++|||++++   ++       .++...      .++..  
T Consensus        78 ~~~-~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~~~l~~~~~~~Gv~li~~~------~~~~~--  148 (256)
T TIGR00688        78 LLI-GFNWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVFLKERISRFQFIAVIIATLGVISNIVL------KGSLP--  148 (256)
T ss_pred             HHH-HHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHH------cCCch--
Confidence            664 488999999999999999999999999999999999999999998   22       221111      11111  


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhhhcCCCchHHHHHHHHHHHHHHHHHHHhhcccccccccchhhHHHHHHHHHHHHHHHH
Q 041987          158 GSTLLAASSLSVCVWNIIQVGTIKQYPQVMKVVSFYSLAGTIQCSIFSLIMERNINAWKLKLNMELLLIIITAIFGSVIR  237 (280)
Q Consensus       158 G~~~~l~aa~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~t~~~  237 (280)
                        .+.++++++||.|.+..|+..++ + ........ ........+... .++.......++..+|..+++.|++ +.++
T Consensus       149 --~~~l~aa~~~a~~~i~~~~~~~~-~-~~~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~g~~-t~i~  221 (256)
T TIGR00688       149 --WEALVLAFSFTAYGLIRKALKNT-D-LAGFCLET-LSLMPVAIYYLL-QTDFATVQQTNPFPIWLLLVLAGLI-TGTP  221 (256)
T ss_pred             --HHHHHHHHHHHHHHHHHhhcCCC-C-cchHHHHH-HHHHHHHHHHHH-HhccCcccccCchhHHHHHHHHHHH-HHHH
Confidence              36789999999999999987543 2 22222111 111111111111 1111111111222367888888886 8899


Q ss_pred             HHHHHhhhhccCcceeccccchHHHHHHHHHHHH
Q 041987          238 STVHVSCAEMKGHLYVPMFKPFGIVFATAFGLTF  271 (280)
Q Consensus       238 ~~~~~~a~~~~~~~~~s~~~~l~pv~a~~l~~~~  271 (280)
                      |.+|++++|+.|+++++++.|+||+++.++|++.
T Consensus       222 ~~l~~~a~~~~~a~~~s~~~yl~Pv~~~~~~~~~  255 (256)
T TIGR00688       222 LLAFVIAANRLPLNLLGLLQYIGPTIMMLCVSFL  255 (256)
T ss_pred             HHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHh
Confidence            9999999999999999999999999999999764

This uncharacterized protein is predicted to have many membrane-spanning domains.

>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator

Probab=99.93  E-value=1.2e-24  Score=192.21  Aligned_cols=255  Identities=12%  Similarity=-0.006  Sum_probs=186.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHhhhcccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
Q 041987           18 MVIMEGCTIGLTIVTKTAMNGGMSPFVFIAYTNALGSILLLPYSFFFHHRGSEAQPLFTLPLMLRFFFLGLTGVAISQNL   97 (280)
Q Consensus        18 ~~~~~~~wg~~~~~~k~~~~~~~~p~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~g~~~~~~~   97 (280)
                      .++..++=....+.-|.++++-..|..+.+.|+..+.+.+.+... . +.+++  ++.+++++.+....|+++ ..+..+
T Consensus         7 ~~~w~~~~~~~~~~NK~~l~~~~~P~~~~~~~~~~~~~~~~~~~~-~-~~~~~--~~~~~~~~~~~~~~g~~~-~~~~~~   81 (302)
T TIGR00817         7 FGLWYFLNVYFNIYNKKLLNVFPYPYFKTLISLAVGSLYCLLSWS-S-GLPKR--LKISSALLKLLLPVAIVH-TIGHVT   81 (302)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhCChhHHHHHHHHHHHHHHHHHHHH-h-CCCCC--CCCCHHHHHHHHHHHHHH-HHHHHH
Confidence            334444434445678999986578999999999999887765521 1 22223  456788899999999997 578899


Q ss_pred             HHHHhhccchhHHHHhhhhhHHHHHHHHHHhhccccCCc---ceee--eCCCCCCCCCCCchhHHHHHHHHHHHHHHHHH
Q 041987           98 AFFGLYYSSPIVVCVMGLLIPAISFLLSIITRKAASDDK---LEAK--INPPLLIFYSTPDRWVLGSTLLAASSLSVCVW  172 (280)
Q Consensus        98 ~~~~l~~~~~~~a~vi~~~~P~~~~il~~i~~~ek~~~~---g~~i--i~~~~~~~~~~~~~~~~G~~~~l~aa~~~a~~  172 (280)
                      .+.|++|++++.++++.++.|+++++++.+++|||++++   |+.+  .+.... ..++.+....|+++.++|+++|+.+
T Consensus        82 ~~~~l~~~s~s~~~li~~~~Pv~~~ll~~~~~~e~~~~~~~~~l~l~~~Gv~l~-~~~~~~~~~~G~~~~l~a~~~~a~~  160 (302)
T TIGR00817        82 SNVSLSKVAVSFTHTIKAMEPFFSVVLSAFFLGQEFPSTLWLSLLPIVGGVALA-SDTELSFNWAGFLSAMISNITFVSR  160 (302)
T ss_pred             HHHHHHhccHHHHHHHHhcchHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHhhh-cCCcccccHHHHHHHHHHHHHHHHH
Confidence            999999999999999999999999999999999999988   3311  111000 0112233467999999999999999


Q ss_pred             HHHHHhhhh--cCCCchHHHHHHHHHHHHHHHHHHHhhcccc-c--cccc-----chhhHHHHHHHHHHHHHHHHHHHHH
Q 041987          173 NIIQVGTIK--QYPQVMKVVSFYSLAGTIQCSIFSLIMERNI-N--AWKL-----KLNMELLLIIITAIFGSVIRSTVHV  242 (280)
Q Consensus       173 ~v~~~~~~~--~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~-~--~~~~-----~~~~~~~~~~~~g~~~t~~~~~~~~  242 (280)
                      .+..||..+  +++ +.+.+.+++..+++.+.|.....|... .  ++..     .....+...+..+..+....+.+++
T Consensus       161 ~v~~k~~~~~~~~~-~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (302)
T TIGR00817       161 NIFSKKAMTIKSLD-KTNLYAYISIMSLFLLSPPAFITEGPPFLPHGFMQAISGVNVTKIYTVSLVAAMGFFHFYQQVAF  239 (302)
T ss_pred             HHHHHHhhccCCCC-cccHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHhhcccCchHHHHHHHHHHHHHHHHHHHHHH
Confidence            999999887  665 889999999999999999887655311 0  1100     0001111122222222222334566


Q ss_pred             hhhhccCcceeccccchHHHHHHHHHHHHhcCccccC
Q 041987          243 SCAEMKGHLYVPMFKPFGIVFATAFGLTFFTNSLHYG  279 (280)
Q Consensus       243 ~a~~~~~~~~~s~~~~l~pv~a~~l~~~~l~E~it~~  279 (280)
                      +++++.||++.++..+++|++++++|++++||++|+.
T Consensus       240 ~~l~~~sa~t~sv~~~l~pv~~~~~~~~~lge~lt~~  276 (302)
T TIGR00817       240 MLLGRVSPLTHSVGNCMKRVVVIVVSILFFGTKISPQ  276 (302)
T ss_pred             HHHccCCchHHHHHhhhhhhheeeeehhhcCCCCchh
Confidence            8999999999999999999999999999999999875

specificities overlap.

>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein

Probab=99.93  E-value=2.1e-24  Score=188.73  Aligned_cols=250  Identities=11%  Similarity=0.047  Sum_probs=176.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHhhhcccCCCCCCCCCHHHHHHHHHHHHHHHHHH
Q 041987           15 FTLMVIMEGCTIGLTIVTKTAMNGGMSPFVFIAYTNALGSILLLPYSFFFHHRGSEAQPLFTLPLMLRFFFLGLTGVAIS   94 (280)
Q Consensus        15 ~l~~~~~~~~wg~~~~~~k~~~~~~~~p~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~g~~~~   94 (280)
                      .+..++++++|+...+..|...++ -++  ..++++..+.+++.|+...+ .++... ++.+++ ++.....+.++...+
T Consensus         3 ~~~~~~aa~~~a~~~~~~k~~~~~-~~~--~~~~~~~~~~~~l~~~~~~~-~~~~~~-~~~~~~-~~~~~~~~~~~~~~~   76 (281)
T TIGR03340         3 LTLVVFSALMHAGWNLMAKSHADK-EPD--FLWWALLAHSVLLTPYGLWY-LAQVGW-SRLPAT-FWLLLAISAVANMVY   76 (281)
T ss_pred             HHHHHHHHHHHHHHHHHHhhcCCc-hhH--HHHHHHHHHHHHHHHHHHHh-cccCCC-CCcchh-hHHHHHHHHHHHHHH
Confidence            456788999999999999966554 344  35888888888888876543 222221 222333 444444555555688


Q ss_pred             HHHHHHHhhccchhHHHHhhhhhHHHHHHHHHHhhccccCCc---ce-------eeeCCCCCCCCCCCchhHHHHHHHHH
Q 041987           95 QNLAFFGLYYSSPIVVCVMGLLIPAISFLLSIITRKAASDDK---LE-------AKINPPLLIFYSTPDRWVLGSTLLAA  164 (280)
Q Consensus        95 ~~~~~~~l~~~~~~~a~vi~~~~P~~~~il~~i~~~ek~~~~---g~-------~ii~~~~~~~~~~~~~~~~G~~~~l~  164 (280)
                      +.++++|+++++++.++.+.++.|+++++++++++|||++++   |+       .++...     +....+..|+.+.++
T Consensus        77 ~~~~~~a~~~~~~~~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~g~~~~~~Gv~ll~~~-----~~~~~~~~g~~~~l~  151 (281)
T TIGR03340        77 FLGLAQAYHHADVGLVYPLARSSPLLVAIWATLTLGETLSPLAWLGILIITLGLLVLGLS-----RFAQHRRKAYAWALA  151 (281)
T ss_pred             HHHHHHHHhcCChhhhhhHHhhhHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhcc-----cccccchhHHHHHHH
Confidence            999999999999999999999999999999999999999988   43       122111     111223468889999


Q ss_pred             HHHHHHHHHHHHHhhhhcCCCchH----HHHHHHHHHHHHHHHHHHhhcccccccccchhhHHHHHHHHHHHHHHHHHHH
Q 041987          165 SSLSVCVWNIIQVGTIKQYPQVMK----VVSFYSLAGTIQCSIFSLIMERNINAWKLKLNMELLLIIITAIFGSVIRSTV  240 (280)
Q Consensus       165 aa~~~a~~~v~~~~~~~~~~~~~~----~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~t~~~~~~  240 (280)
                      ++++|+.|.+..|+..++.+ +..    .+.+++..+++...+.....+..  .+. .++..+...++.+.+++.++|.+
T Consensus       152 aal~~a~~~i~~k~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~-~~~~~~~~~~~~~~~~s~l~~~l  227 (281)
T TIGR03340       152 AALGTAIYSLSDKAAALGVP-AFYSALGYLGIGFLAMGWPFLLLYLKRHGR--SMF-PYARQILPSATLGGLMIGGAYAL  227 (281)
T ss_pred             HHHHHHHhhhhccccccchh-cccccHHHHHHHHHHHHHHHHHHHHHHhcc--chh-hhHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999887655443 322    22233333222222221111111  111 12234556678888899999999


Q ss_pred             HHhhhhccCcceeccccchHHHHHHHHHHHHhcCccccC
Q 041987          241 HVSCAEMKGHLYVPMFKPFGIVFATAFGLTFFTNSLHYG  279 (280)
Q Consensus       241 ~~~a~~~~~~~~~s~~~~l~pv~a~~l~~~~l~E~it~~  279 (280)
                      |++++|+.|+++++.+.+++|+++.++|++++||+++..
T Consensus       228 ~~~al~~~~a~~~~~~~~l~pv~a~l~g~~~lgE~~~~~  266 (281)
T TIGR03340       228 VLWAMTRLPVATVVALRNTSIVFAVVLGIWFLNERWYLT  266 (281)
T ss_pred             HHHHHhhCCceEEEeecccHHHHHHHHHHHHhCCCccHH
Confidence            999999999999999999999999999999999999864

This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.

>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional

Probab=99.91  E-value=2.9e-22  Score=180.10  Aligned_cols=262  Identities=16%  Similarity=0.097  Sum_probs=191.5

Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHHHhCCCC-hHHHHHHHHHHHHHHHHHHHhhhcccCCCCCCCC--CHHHHHHHHHHH
Q 041987           11 EMVPFTLMVIMEGCTIGLTIVTKTAMNGGMS-PFVFIAYTNALGSILLLPYSFFFHHRGSEAQPLF--TLPLMLRFFFLG   87 (280)
Q Consensus        11 ~~~~~l~~~~~~~~wg~~~~~~k~~~~~~~~-p~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~g   87 (280)
                      +.|.....+....+=.......|.++++ .+ |+.+..+|++++++++......  +.+++  ++.  +++++.++...|
T Consensus        47 ~~~~~~~~~~wy~~s~~~~~~nK~vl~~-~~~P~~l~~~~~~~~~l~~~~~~~~--~~~~~--~~~~~~~~~~~~llp~g  121 (350)
T PTZ00343         47 KWKLALLFLTWYALNVLYVVDNKLALNM-LPLPWTISSLQLFVGWLFALLYWAT--GFRKI--PRIKSLKLFLKNFLPQG  121 (350)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHHHHh-CChhHHHHHHHHHHHHHHHHHHHHh--CCCCC--CCCCCHHHHHHHHHHHH
Confidence            4555666666666656667889999987 99 9999999999998876554332  22222  333  345678888999


Q ss_pred             HHHHHHHHHHHHHHhhccchhHHHHhhhhhHHHHHHHHHHhhccccCCc---ceeee-CCCCCCCCCCCchhHHHHHHHH
Q 041987           88 LTGVAISQNLAFFGLYYSSPIVVCVMGLLIPAISFLLSIITRKAASDDK---LEAKI-NPPLLIFYSTPDRWVLGSTLLA  163 (280)
Q Consensus        88 l~g~~~~~~~~~~~l~~~~~~~a~vi~~~~P~~~~il~~i~~~ek~~~~---g~~ii-~~~~~~~~~~~~~~~~G~~~~l  163 (280)
                      +++... ....+.|+++++++.+.++-++.|+++++++++++|||++++   ++.++ .+.......+.+.+..|+++++
T Consensus       122 l~~~~~-~~~~~~sl~~~svs~~~iika~~Pvft~lls~~~l~ek~s~~~~l~l~l~v~Gv~l~~~~~~~~~~~G~~~~l  200 (350)
T PTZ00343        122 LCHLFV-HFGAVISMGLGAVSFTHVVKAAEPVFTALLSILFLKQFLNLYAYLSLIPIVGGVALASVKELHFTWLAFWCAM  200 (350)
T ss_pred             HHHHHH-HHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHheecccchhHHHHHHHHH
Confidence            988754 455679999999999999999999999999999999999998   33111 1110000122233467999999


Q ss_pred             HHHHHHHHHHHHHHhhhhcCC------CchHHHHHHHHHHHHHHHHHHHhhcccc--cccc----cchhhHHHHHHHHHH
Q 041987          164 ASSLSVCVWNIIQVGTIKQYP------QVMKVVSFYSLAGTIQCSIFSLIMERNI--NAWK----LKLNMELLLIIITAI  231 (280)
Q Consensus       164 ~aa~~~a~~~v~~~~~~~~~~------~~~~~~~~~~~~~~i~~~~~~~~~~~~~--~~~~----~~~~~~~~~~~~~g~  231 (280)
                      +|+++|+.++++.|+..++.+      ++.....++...+++.++|+....|...  ..+.    ......+..+++ .+
T Consensus       201 ~s~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lp~~~~~e~~~~~~~~~~~~~~~~~~~~~~~l~-~i  279 (350)
T PTZ00343        201 LSNLGSSLRSIFAKKTMKNKSEIGENLTASNIYMLLTLIASLISLPLVLFFEGKKWVPVWTNYTANMTNYTKGIIIF-KI  279 (350)
T ss_pred             HHHHHHHHHHHHHHHHhcccccccccCCHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhhhcccccchHHHHH-HH
Confidence            999999999999999876532      1444555668899999999887555321  0110    001111233444 35


Q ss_pred             HHHHHHHHHHHh----hhhccCcceeccccchHHHHHHHHHHHHhcCccccC
Q 041987          232 FGSVIRSTVHVS----CAEMKGHLYVPMFKPFGIVFATAFGLTFFTNSLHYG  279 (280)
Q Consensus       232 ~~t~~~~~~~~~----a~~~~~~~~~s~~~~l~pv~a~~l~~~~l~E~it~~  279 (280)
                      +.+++.|++|+.    ++++.+|...++..+++|++++++|++++||++|+.
T Consensus       280 ~~s~l~~~l~n~~~f~~l~~~s~~t~sv~~~lk~V~~iv~s~l~~ge~lt~~  331 (350)
T PTZ00343        280 FFSGVWYYLYNEVAFYCLGKVNQVTHAVANTLKRVVIIVSSIIIFQTQVTLL  331 (350)
T ss_pred             HHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHhhhhHHHhCCCCchH
Confidence            678999999995    999999999999999999999999999999999874

>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]

Probab=99.89  E-value=6.1e-21  Score=166.54  Aligned_cols=255  Identities=16%  Similarity=0.145  Sum_probs=186.6

Q ss_pred             cchhhHHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHhhhcccCCCCCCCCCHHHHHHHHHHHH
Q 041987            9 EEEMVPFTLMVIMEGCTIGLTIVTKTAMNGGMSPFVFIAYTNALGSILLLPYSFFFHHRGSEAQPLFTLPLMLRFFFLGL   88 (280)
Q Consensus         9 ~~~~~~~l~~~~~~~~wg~~~~~~k~~~~~~~~p~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl   88 (280)
                      ++........++..+.|+.+....|...++..++....+.|+..+.+...+....  ++..+  . ...+++.+....+.
T Consensus         3 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~--~-~~~~~~~~~~~~~~   77 (292)
T COG0697           3 RALLLGLLALLLWGLLWGLSFIALKLAVESLDPFLFAAALRFLIAALLLLPLLLL--EPRGL--R-PALRPWLLLLLLAL   77 (292)
T ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHHHhcccCChHHHHHHHHHHHHHHHHHHHHh--hcccc--c-ccccchHHHHHHHH
Confidence            3455677888888899999999999998764677777777999999885444322  11111  1 11111345566666


Q ss_pred             HHHHHHHHHHHHHhhccchhHHHHhhhhhHHHHHHHHH-HhhccccCCc---ce-------eeeCCCCCCCCCCCch-hH
Q 041987           89 TGVAISQNLAFFGLYYSSPIVVCVMGLLIPAISFLLSI-ITRKAASDDK---LE-------AKINPPLLIFYSTPDR-WV  156 (280)
Q Consensus        89 ~g~~~~~~~~~~~l~~~~~~~a~vi~~~~P~~~~il~~-i~~~ek~~~~---g~-------~ii~~~~~~~~~~~~~-~~  156 (280)
                      ++...++.+++.++++++++.++.+.++.|+++.+++. +++|||++++   ++       .++....    ...+. ..
T Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Gv~lv~~~~----~~~~~~~~  153 (292)
T COG0697          78 LGLALPFLLLFLALKYTSASVASLIIGLLPLFTALLAVLLLLGERLSLLQILGILLALAGVLLILLGG----GGGGILSL  153 (292)
T ss_pred             HHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHheecCC----CcchhHHH
Confidence            66778999999999999999999999999999999997 6779999998   32       2222211    11111 57


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhhhcCCCchHHHH-HHHHHHHHHHHHHHHhhcccccccccchhhHHHHHHHHHHHHHH
Q 041987          157 LGSTLLAASSLSVCVWNIIQVGTIKQYPQVMKVVS-FYSLAGTIQCSIFSLIMERNINAWKLKLNMELLLIIITAIFGSV  235 (280)
Q Consensus       157 ~G~~~~l~aa~~~a~~~v~~~~~~~~~~~~~~~~~-~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~t~  235 (280)
                      .|+.+.+.++++|+.+.+..|+.. +.+ +..... +++.....  ..........  . .......+....+.|+++++
T Consensus       154 ~g~~~~l~a~~~~a~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~--~~~~~~~~~~--~-~~~~~~~~~~~~~~g~~~~~  226 (292)
T COG0697         154 LGLLLALAAALLWALYTALVKRLS-RLG-PVTLALLLQLLLALL--LLLLFFLSGF--G-APILSRAWLLLLYLGVFSTG  226 (292)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhc-CCC-hHHHHHHHHHHHHHH--HHHHHHhccc--c-ccCCHHHHHHHHHHHHHHHH
Confidence            899999999999999999999887 544 545554 44441122  2211111111  1 11233457788899999999


Q ss_pred             HHHHHHHhhhhccCcceeccccchHHHHHHHHHHHHhcCccccC
Q 041987          236 IRSTVHVSCAEMKGHLYVPMFKPFGIVFATAFGLTFFTNSLHYG  279 (280)
Q Consensus       236 ~~~~~~~~a~~~~~~~~~s~~~~l~pv~a~~l~~~~l~E~it~~  279 (280)
                      +++.+|++++++.++++++.+.+++|+++.+++++++||+++..
T Consensus       227 i~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~l~~~e~~~~~  270 (292)
T COG0697         227 LAYLLWYYALRLLGASLVALLSLLEPVFAALLGVLLLGEPLSPA  270 (292)
T ss_pred             HHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhCCCCcHH
Confidence            99999999999999999999999999999999999999999864

>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]

Probab=99.83  E-value=8.6e-19  Score=144.62  Aligned_cols=247  Identities=13%  Similarity=0.016  Sum_probs=194.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHhhhcccCCCCCCCCCHHHHHHHHHHHHHHHHH
Q 041987           14 PFTLMVIMEGCTIGLTIVTKTAMNGGMSPFVFIAYTNALGSILLLPYSFFFHHRGSEAQPLFTLPLMLRFFFLGLTGVAI   93 (280)
Q Consensus        14 ~~l~~~~~~~~wg~~~~~~k~~~~~~~~p~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~g~~~   93 (280)
                      ++..+..++..-=....+.|...+. ++|.-.+.+|..++.+++.++..     .-+  .+.+++++..+...|..-. .
T Consensus        13 p~~~ll~amvsiq~Gas~Ak~LFP~-vG~~g~t~lRl~~aaLIll~l~R-----Pwr--~r~~~~~~~~~~~yGvsLg-~   83 (292)
T COG5006          13 PILALLVAMVSIQSGASFAKSLFPL-VGAAGVTALRLAIAALILLALFR-----PWR--RRLSKPQRLALLAYGVSLG-G   83 (292)
T ss_pred             cHHHHHHHHHHHHhhHHHHHHHccc-cChhhHHHHHHHHHHHHHHHHhh-----HHH--hccChhhhHHHHHHHHHHH-H
Confidence            5777888877777778889999988 99999999999999999988742     112  3456677888888886654 4


Q ss_pred             HHHHHHHHhhccchhHHHHhhhhhHHHHHHHHHHhhccccCCc-------ceeeeCCCCCCCCCCCchhHHHHHHHHHHH
Q 041987           94 SQNLAFFGLYYSSPIVVCVMGLLIPAISFLLSIITRKAASDDK-------LEAKINPPLLIFYSTPDRWVLGSTLLAASS  166 (280)
Q Consensus        94 ~~~~~~~~l~~~~~~~a~vi~~~~P~~~~il~~i~~~ek~~~~-------g~~ii~~~~~~~~~~~~~~~~G~~~~l~aa  166 (280)
                      .+.+||.+++.++.+.+..+.++-|+.++.+.   .|+..+..       |+.++...   .++..+.+..|..+++.++
T Consensus        84 MNl~FY~si~riPlGiAVAiEF~GPL~vA~~~---sRr~~d~vwvaLAvlGi~lL~p~---~~~~~~lDp~Gv~~Al~AG  157 (292)
T COG5006          84 MNLLFYLSIERIPLGIAVAIEFTGPLAVALLS---SRRLRDFVWVALAVLGIWLLLPL---GQSVWSLDPVGVALALGAG  157 (292)
T ss_pred             HHHHHHHHHHhccchhhhhhhhccHHHHHHHh---ccchhhHHHHHHHHHHHHhheec---cCCcCcCCHHHHHHHHHHh
Confidence            56889999999999999999999999877753   23333322       33232222   2345666789999999999


Q ss_pred             HHHHHHHHHHHhhhhcCCCchHHHHHHHHHHHHHHHHHHHhhcccccccccchhhHHHHHHHHHHHHHHHHHHHHHhhhh
Q 041987          167 LSVCVWNIIQVGTIKQYPQVMKVVSFYSLAGTIQCSIFSLIMERNINAWKLKLNMELLLIIITAIFGSVIRSTVHVSCAE  246 (280)
Q Consensus       167 ~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~t~~~~~~~~~a~~  246 (280)
                      .||+.|++..||..+..+ ...-+...+.+++++.+|+..-...+    ...++.-...-+..+++++++.|.+=..+++
T Consensus       158 ~~Wa~YIv~G~r~g~~~~-g~~g~a~gm~vAaviv~Pig~~~ag~----~l~~p~ll~laLgvavlSSalPYsLEmiAL~  232 (292)
T COG5006         158 ACWALYIVLGQRAGRAEH-GTAGVAVGMLVAALIVLPIGAAQAGP----ALFSPSLLPLALGVAVLSSALPYSLEMIALR  232 (292)
T ss_pred             HHHHHHHHHcchhcccCC-CchHHHHHHHHHHHHHhhhhhhhcch----hhcChHHHHHHHHHHHHhcccchHHHHHHHh
Confidence            999999999999875544 66788899999999999998743221    1112223455668899999999999999999


Q ss_pred             ccCcceeccccchHHHHHHHHHHHHhcCccccCC
Q 041987          247 MKGHLYVPMFKPFGIVFATAFGLTFFTNSLHYGR  280 (280)
Q Consensus       247 ~~~~~~~s~~~~l~pv~a~~l~~~~l~E~it~~~  280 (280)
                      |.+...-+++..+||.++.+.|++++||++|+.|
T Consensus       233 rlp~~~F~~LlSLePa~aAl~G~i~L~e~ls~~q  266 (292)
T COG5006         233 RLPARTFGTLLSLEPALAALSGLIFLGETLTLIQ  266 (292)
T ss_pred             hCChhHHHHHHHhhHHHHHHHHHHHhcCCCCHHH
Confidence            9999999999999999999999999999999753

>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein

Probab=99.82  E-value=3.8e-18  Score=149.70  Aligned_cols=245  Identities=13%  Similarity=0.066  Sum_probs=174.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHhhhcccCCCCCCCCCHHHHHHHHHHHHHHHHH
Q 041987           14 PFTLMVIMEGCTIGLTIVTKTAMNGGMSPFVFIAYTNALGSILLLPYSFFFHHRGSEAQPLFTLPLMLRFFFLGLTGVAI   93 (280)
Q Consensus        14 ~~l~~~~~~~~wg~~~~~~k~~~~~~~~p~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~g~~~   93 (280)
                      +++..++++++||++.+..|...  |.++.++.  |..++.+++..+.... +++    ++.+++.+..-.+.|.+ -..
T Consensus         2 ~~l~~lia~~~wGs~g~~~k~~~--g~~~~~~~--~~~~g~l~~~~~~~~~-~~~----~~~~~~~~~~g~l~G~~-w~i   71 (290)
T TIGR00776         2 DILIALIPALFWGSFVLINVKIG--GGPYSQTL--GTTFGALILSIAIAIF-VLP----EFWALSIFLVGLLSGAF-WAL   71 (290)
T ss_pred             chHHHHHHHHHHhhhHHHHhccC--CCHHHHHH--HHHHHHHHHHHHHHHH-hCC----cccccHHHHHHHHHHHH-HHh
Confidence            46788999999999999999864  58888876  8888888887766554 321    11223333333333333 457


Q ss_pred             HHHHHHHHhhccchhHHHHhhh-hhHHHHHHHHHHhhccccCCc-------ce-------eeeCCCCCCCCCCC--chhH
Q 041987           94 SQNLAFFGLYYSSPIVVCVMGL-LIPAISFLLSIITRKAASDDK-------LE-------AKINPPLLIFYSTP--DRWV  156 (280)
Q Consensus        94 ~~~~~~~~l~~~~~~~a~vi~~-~~P~~~~il~~i~~~ek~~~~-------g~-------~ii~~~~~~~~~~~--~~~~  156 (280)
                      .+.+++.+.++++.+.+-.+.+ ++|++..+.+.+++|||.+++       |+       .++.....+..+++  .+..
T Consensus        72 g~~~~~~ai~~~gva~a~~i~~~~~~v~~~l~~~~~f~e~~t~~~~~~~~~g~~l~l~G~~l~~~~~~~~~~~~~~~~~~  151 (290)
T TIGR00776        72 GQINQFKSMRYMGVSKTMPISTGFQLVGGTLFGVIVFGEWSTSIQTLLGLLALILIIIGVYLTSRSKDKSAGIKSEFNFK  151 (290)
T ss_pred             hhhhHHHHHHHHhHHHHhHHHHHHHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHhHheEEeccccccccccccchh
Confidence            7899999999999999988887 888899999999999999887       22       11111111111101  2336


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhhhcCCCchHH---HHHHHHHHHHHHHHHHHhhcccccccccchhhHHHHHHHHHHHH
Q 041987          157 LGSTLLAASSLSVCVWNIIQVGTIKQYPQVMKV---VSFYSLAGTIQCSIFSLIMERNINAWKLKLNMELLLIIITAIFG  233 (280)
Q Consensus       157 ~G~~~~l~aa~~~a~~~v~~~~~~~~~~~~~~~---~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~  233 (280)
                      .|.++.++++++|+.|.+..|+.  +++ |.+.   ..+.++.+++...+... ..+   ++  .+...+..++ .|++ 
T Consensus       152 ~Gi~~~l~sg~~y~~~~~~~~~~--~~~-~~~~~~~~~~g~~~~~~~~~~~~~-~~~---~~--~~~~~~~~~~-~Gi~-  220 (290)
T TIGR00776       152 KGILLLLMSTIGYLVYVVVAKAF--GVD-GLSVLLPQAIGMVIGGIIFNLGHI-LAK---PL--KKYAILLNIL-PGLM-  220 (290)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHc--CCC-cceehhHHHHHHHHHHHHHHHHHh-ccc---ch--HHHHHHHHHH-HHHH-
Confidence            89999999999999999999975  355 7776   44444445544433221 001   11  2222344444 8887 


Q ss_pred             HHHHHHHHHhhhh-ccCcceeccccchHHHHHHHHHHHHhcCccccC
Q 041987          234 SVIRSTVHVSCAE-MKGHLYVPMFKPFGIVFATAFGLTFFTNSLHYG  279 (280)
Q Consensus       234 t~~~~~~~~~a~~-~~~~~~~s~~~~l~pv~a~~l~~~~l~E~it~~  279 (280)
                      +.+++.+|..+.+ +.+++.++.+.+.||+.+.+++++++||+.+..
T Consensus       221 ~~ia~~~y~~~~~~~~~~~~~~~ls~~~pvia~~~~v~~l~E~~~~~  267 (290)
T TIGR00776       221 WGIGNFFYLFSAQPKVGVATSFSLSQLGVIISTLGGILILGEKKTKR  267 (290)
T ss_pred             HHHHHHHHHHHcccccchhhHHHHHHHHHHHHHHHHHHHhccCCCcc
Confidence            7999999999999 999999999999999999999999999998754

These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.

>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function

Probab=99.80  E-value=4e-17  Score=144.13  Aligned_cols=253  Identities=17%  Similarity=0.158  Sum_probs=180.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHhCC--CChHHHHHHHHHHHHHHHHHHHhhhcccCCCCCCCCCHHHHHHHHHHHHHHHHHHH
Q 041987           18 MVIMEGCTIGLTIVTKTAMNGG--MSPFVFIAYTNALGSILLLPYSFFFHHRGSEAQPLFTLPLMLRFFFLGLTGVAISQ   95 (280)
Q Consensus        18 ~~~~~~~wg~~~~~~k~~~~~~--~~p~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~g~~~~~   95 (280)
                      .+++- +=..+.+.+....+.|  .|..+......+++ ++..++...+ +++++. .+.-+++|+++.+.|++.. ..+
T Consensus        19 Q~lsl-~~~~t~~~s~~l~~~~~~~P~~Qs~~~Y~~l~-~vy~~~~~~r-~~~~~~-~~~~~~~~w~y~lla~~Dv-~aN   93 (334)
T PF06027_consen   19 QVLSL-CITGTGTFSSLLANKGVNIPTFQSFFNYVLLA-LVYTPILLYR-RGFKKW-LKVLKRPWWKYFLLALLDV-EAN   93 (334)
T ss_pred             HHHHH-HHHhHHHHHHHHHhcCccCcHHHHHHHHHHHH-HHHhhhhhhc-cccccc-hhhcchhHHHHHHHHHHHH-HHH
Confidence            33443 4455555555554445  44455544444444 3444554443 222221 2334566888899999996 778


Q ss_pred             HHHHHHhhccchhHHHHhhhhhHHHHHHHHHHhhccccCCc---ce-------eeeCCC--C-CCCCCCCchhHHHHHHH
Q 041987           96 NLAFFGLYYSSPIVVCVMGLLIPAISFLLSIITRKAASDDK---LE-------AKINPP--L-LIFYSTPDRWVLGSTLL  162 (280)
Q Consensus        96 ~~~~~~l~~~~~~~a~vi~~~~P~~~~il~~i~~~ek~~~~---g~-------~ii~~~--~-~~~~~~~~~~~~G~~~~  162 (280)
                      ++...|++||+.+.+.++-.+.-.++++++++++|||.++.   |+       .++...  . ++..+++++...||+++
T Consensus        94 ~~~v~a~~yTsvtS~~lL~~~~i~~~~~LS~~fL~~ry~~~~~~gv~i~i~Gv~lv~~sD~~~~~~~~~~~~~i~GDll~  173 (334)
T PF06027_consen   94 YLVVLAYQYTSVTSVQLLDCTSIPFVMILSFIFLKRRYSWFHILGVLICIAGVVLVVVSDVLSGSDSSSGSNPILGDLLA  173 (334)
T ss_pred             HHHHHHhhcccHhHHHhhhhhhhHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhheeeecccccccCCCCCccchhHHHH
Confidence            99999999999999999999999999999999999999988   33       222211  1 11123456778999999


Q ss_pred             HHHHHHHHHHHHHHHhhhhcCCCchHHHHHHHHHHHHHHHHHHHhhccc-ccccccchhhHHHHHHHHHHHHHHHHHHHH
Q 041987          163 AASSLSVCVWNIIQVGTIKQYPQVMKVVSFYSLAGTIQCSIFSLIMERN-INAWKLKLNMELLLIIITAIFGSVIRSTVH  241 (280)
Q Consensus       163 l~aa~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~t~~~~~~~  241 (280)
                      ++++..||+++|+.++..++.+ ..+.....-++|.++..+.....|.. ....++.+ ..+...+ ...++...-|.+.
T Consensus       174 l~~a~lya~~nV~~E~~v~~~~-~~~~lg~~Glfg~ii~~iq~~ile~~~i~~~~w~~-~~~~~~v-~~~~~lf~~y~l~  250 (334)
T PF06027_consen  174 LLGAILYAVSNVLEEKLVKKAP-RVEFLGMLGLFGFIISGIQLAILERSGIESIHWTS-QVIGLLV-GYALCLFLFYSLV  250 (334)
T ss_pred             HHHHHHHHHHHHHHHHhcccCC-HHHHHHHHHHHHHHHHHHHHHheehhhhhccCCCh-hhHHHHH-HHHHHHHHHHHHH
Confidence            9999999999999999999886 77778888888998888777666653 22222222 1233322 2334667788888


Q ss_pred             HhhhhccCcceeccccchHHHHHHHHHHHHhcCcccc
Q 041987          242 VSCAEMKGHLYVPMFKPFGIVFATAFGLTFFTNSLHY  278 (280)
Q Consensus       242 ~~a~~~~~~~~~s~~~~l~pv~a~~l~~~~l~E~it~  278 (280)
                      ...++..+|+...+-..+..+++.+++++++||+++|
T Consensus       251 p~~l~~ssAt~~nLsLLTsd~~ali~~i~~f~~~~~~  287 (334)
T PF06027_consen  251 PIVLRMSSATFFNLSLLTSDFYALIIDIFFFGYKFSW  287 (334)
T ss_pred             HHHHHhCccceeehHHHHhhHHHHHHHHHhcCccccH
Confidence            9999999999999999999999999999999999986

Some of the sequences in this family are annotated as putative membrane proteins.

>COG2962 RarD Predicted permeases [General function prediction only]

Probab=99.74  E-value=1.6e-16  Score=134.40  Aligned_cols=257  Identities=11%  Similarity=0.049  Sum_probs=186.4

Q ss_pred             cchhhHHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHhhhcccCCCC-CCCCCHHHHHHHHHHH
Q 041987            9 EEEMVPFTLMVIMEGCTIGLTIVTKTAMNGGMSPFVFIAYTNALGSILLLPYSFFFHHRGSEA-QPLFTLPLMLRFFFLG   87 (280)
Q Consensus         9 ~~~~~~~l~~~~~~~~wg~~~~~~k~~~~~~~~p~~~~~~R~~~a~l~l~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g   87 (280)
                      ++..||++..+.+.+.||..+...|.. +. .++.++...|.+-+.+.+..+.... ++.+.. .-..++|.+..+...+
T Consensus         3 ~~~~~Gil~~l~Ay~lwG~lp~y~kll-~~-~~~~eIlahRviwS~~~~l~ll~~~-r~~~~~~~~~~~p~~~~~~~l~a   79 (293)
T COG2962           3 KDSRKGILLALLAYLLWGLLPLYFKLL-EP-LPATEILAHRVIWSFPFMLALLFLL-RQWRELKQLLKQPKTLLMLALTA   79 (293)
T ss_pred             CcccchhHHHHHHHHHHHHHHHHHHHH-cc-CCHHHHHHHHHHHHHHHHHHHHHHH-hhhHHHHHHHhCcHHHHHHHHHH
Confidence            345689999999999999999999987 44 9999999999999999888776654 332111 0123445566666666


Q ss_pred             HHHHHHHHHHHHHHhhccchhHHHHhhhhhHHHHHHHHHHhhccccCCc-ce----eeeCCCCCCCCCCCchhHHHHHHH
Q 041987           88 LTGVAISQNLAFFGLYYSSPIVVCVMGLLIPAISFLLSIITRKAASDDK-LE----AKINPPLLIFYSTPDRWVLGSTLL  162 (280)
Q Consensus        88 l~g~~~~~~~~~~~l~~~~~~~a~vi~~~~P~~~~il~~i~~~ek~~~~-g~----~ii~~~~~~~~~~~~~~~~G~~~~  162 (280)
                      ++- ..+...|.+|.++-.+-++|.=++.+|++..+++.+++|||+++. -+    +.++... ..-..++.+    ...
T Consensus        80 ~li-~~nW~lfiWAvn~g~~leaSLGY~InPL~~VllG~lflkErls~~Q~iAV~lA~~GV~~-~~~~~g~lp----wva  153 (293)
T COG2962          80 LLI-GLNWWLFIWAVNNGHVLEASLGYFINPLVNVLLGRLFLKERLSRLQWIAVGLAAAGVLI-QTWLLGSLP----WVA  153 (293)
T ss_pred             HHH-HHHHHHhheecCCCchhHHHhHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHH-HHHHcCCCc----HHH
Confidence            553 589999999999999999999999999999999999999999988 11    2221110 001112222    245


Q ss_pred             HHHHHHHHHHHHHHHhhhhcCCCchHHHHHHHHHHHHHHHHHHHhhcccccccccchhhHHHHHHHHHHHHHHHHHHHHH
Q 041987          163 AASSLSVCVWNIIQVGTIKQYPQVMKVVSFYSLAGTIQCSIFSLIMERNINAWKLKLNMELLLIIITAIFGSVIRSTVHV  242 (280)
Q Consensus       163 l~aa~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~t~~~~~~~~  242 (280)
                      +.=+++|+.|-...|+.  +.+ +.+-....++.-....+...+..+..........+..+..++..|. .|+++..+|.
T Consensus       154 l~la~sf~~Ygl~RK~~--~v~-a~~g~~lE~l~l~p~al~yl~~l~~~~~~~~~~~~~~~~LLv~aG~-vTavpL~lf~  229 (293)
T COG2962         154 LALALSFGLYGLLRKKL--KVD-ALTGLTLETLLLLPVALIYLLFLADSGQFLQQNANSLWLLLVLAGL-VTAVPLLLFA  229 (293)
T ss_pred             HHHHHHHHHHHHHHHhc--CCc-hHHhHHHHHHHHhHHHHHHHHHHhcCchhhhcCCchHHHHHHHhhH-HHHHHHHHHH
Confidence            66678999999976654  233 5455555555555555555444443211011123345667777888 7789999999


Q ss_pred             hhhhccCcceeccccchHHHHHHHHHHHHhcCcccc
Q 041987          243 SCAEMKGHLYVPMFKPFGIVFATAFGLTFFTNSLHY  278 (280)
Q Consensus       243 ~a~~~~~~~~~s~~~~l~pv~a~~l~~~~l~E~it~  278 (280)
                      .+-|+++-+..+.++|.+|..-.++|++++||+++.
T Consensus       230 ~aa~~lpls~~G~lqYi~Ptl~fllav~i~~E~~~~  265 (293)
T COG2962         230 AAAKRLPLSTLGFLQYIEPTLMFLLAVLIFGEPFDS  265 (293)
T ss_pred             HHHhcCCHHHHHHHHHHHHHHHHHHHHHHcCCCCCH
Confidence            999999999999999999999999999999999975

>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]

Probab=99.72  E-value=2.2e-18  Score=143.24  Aligned_cols=253  Identities=16%  Similarity=0.138  Sum_probs=184.6

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHhhhcccCCCCCCCCCHHHHHHHHHHHHHHH
Q 041987           12 MVPFTLMVIMEGCTIGLTIVTKTAMNGGMSPFVFIAYTNALGSILLLPYSFFFHHRGSEAQPLFTLPLMLRFFFLGLTGV   91 (280)
Q Consensus        12 ~~~~l~~~~~~~~wg~~~~~~k~~~~~~~~p~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~g~   91 (280)
                      .++.....++ ..+.+..+..+..++  .+|.+....|++.-.++..|..+.. +....  .+...|.  ++.++|+.|.
T Consensus        37 ~~gl~l~~vs-~ff~~~~vv~t~~~e--~~p~e~a~~r~l~~mlit~pcliy~-~~~v~--gp~g~R~--~LiLRg~mG~  108 (346)
T KOG4510|consen   37 NLGLLLLTVS-YFFNSCMVVSTKVLE--NDPMELASFRLLVRMLITYPCLIYY-MQPVI--GPEGKRK--WLILRGFMGF  108 (346)
T ss_pred             ccCceehhhH-HHHhhHHHhhhhhhc--cChhHhhhhhhhhehhhhheEEEEE-eeeee--cCCCcEE--EEEeehhhhh
Confidence            3455555555 566666666666554  6899999999888888887766554 33322  2223333  3566788885


Q ss_pred             HHHHHHHHHHhhccchhHHHHhhhhhHHHHHHHHHHhhccccCCc----------ceeee-CCC-------CCCCCCCCc
Q 041987           92 AISQNLAFFGLYYSSPIVVCVMGLLIPAISFLLSIITRKAASDDK----------LEAKI-NPP-------LLIFYSTPD  153 (280)
Q Consensus        92 ~~~~~~~~~~l~~~~~~~a~vi~~~~P~~~~il~~i~~~ek~~~~----------g~~ii-~~~-------~~~~~~~~~  153 (280)
                       ....+.|||++|.+.++|+++..+.|.+|.++++.++|||.++.          |+.+| .+.       ++.+.++.+
T Consensus       109 -tgvmlmyya~~~mslaDA~vItFssPvft~ifaw~~LkE~~t~~eaL~s~itl~GVVLIvRPpFlFG~~t~g~~~s~~~  187 (346)
T KOG4510|consen  109 -TGVMLMYYALMYMSLADAVVITFSSPVFTIIFAWAFLKEPFTKFEALGSLITLLGVVLIVRPPFLFGDTTEGEDSSQVE  187 (346)
T ss_pred             -hHHHHHHHHHhhcchhheEEEEecChHHHHHHHHHHHcCCCcHHHHHHHHHhhheEEEEecCCcccCCCcccccccccc
Confidence             67778899999999999999999999999999999999999988          44333 221       111112224


Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCchHHHHHHHHHHHHHHHHHHHhhcccccccccc-hhhHHHHHHHHHHH
Q 041987          154 RWVLGSTLLAASSLSVCVWNIIQVGTIKQYPQVMKVVSFYSLAGTIQCSIFSLIMERNINAWKLK-LNMELLLIIITAIF  232 (280)
Q Consensus       154 ~~~~G~~~~l~aa~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~g~~  232 (280)
                      .+..|.+.++.+++.-|.-.++.|++-|+.+ ......+..+++.+..+......+    .++.+ ...+++.++.+|++
T Consensus       188 ~~~~gt~aai~s~lf~asvyIilR~iGk~~h-~~msvsyf~~i~lV~s~I~~~~ig----~~~lP~cgkdr~l~~~lGvf  262 (346)
T KOG4510|consen  188 YDIPGTVAAISSVLFGASVYIILRYIGKNAH-AIMSVSYFSLITLVVSLIGCASIG----AVQLPHCGKDRWLFVNLGVF  262 (346)
T ss_pred             ccCCchHHHHHhHhhhhhHHHHHHHhhcccc-EEEEehHHHHHHHHHHHHHHhhcc----ceecCccccceEEEEEehhh
Confidence            4567888899999888888888898877765 555555666666666554443222    33333 33467777888995


Q ss_pred             HHHHHHHHHHhhhhccCcceeccccchHHHHHHHHHHHHhcCccccC
Q 041987          233 GSVIRSTVHVSCAEMKGHLYVPMFKPFGIVFATAFGLTFFTNSLHYG  279 (280)
Q Consensus       233 ~t~~~~~~~~~a~~~~~~~~~s~~~~l~pv~a~~l~~~~l~E~it~~  279 (280)
                      + ++++.+...++|+-.+..+++..+.+.++|.++.++++||.+|+-
T Consensus       263 g-figQIllTm~lQiErAGpvaim~~~dvvfAf~wqv~ff~~~Pt~w  308 (346)
T KOG4510|consen  263 G-FIGQILLTMGLQIERAGPVAIMTYTDVVFAFFWQVLFFGHWPTIW  308 (346)
T ss_pred             h-hHHHHHHHHHhhhhccCCeehhhHHHHHHHHHHHHHHhcCCChHH
Confidence            5 799999999999999999999999999999999999999999864

>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []

Probab=99.48  E-value=3.4e-11  Score=106.44  Aligned_cols=231  Identities=13%  Similarity=0.074  Sum_probs=168.3

Q ss_pred             ChHHHHHHHHHHHHHHHHHHHhhhcccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHhhhhhHHH
Q 041987           41 SPFVFIAYTNALGSILLLPYSFFFHHRGSEAQPLFTLPLMLRFFFLGLTGVAISQNLAFFGLYYSSPIVVCVMGLLIPAI  120 (280)
Q Consensus        41 ~p~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~g~~~~~~~~~~~l~~~~~~~a~vi~~~~P~~  120 (280)
                      .|..+++..+....+.-.+..... ++++.  ++.+   +.++...+.+.. ....+.+.|++|+|...-.+.=...|+.
T Consensus        31 ~~~~lt~~q~~~~~~~~~~~~~~~-~~~~~--~~~~---~~~~~~~~~~~~-~~~~~~~~al~~i~~p~~~~~ks~~~i~  103 (303)
T PF08449_consen   31 FPLFLTFVQFAFNALFSFILLSLF-KFPKS--RKIP---LKKYAILSFLFF-LASVLSNAALKYISYPTQIVFKSSKPIP  103 (303)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHhc-cccCC--CcCh---HHHHHHHHHHHH-HHHHHHHHHHHhCChHHHHHHhhhHHHH
Confidence            388999999999888777765544 31222  3334   455566676654 7788999999999999888888999999


Q ss_pred             HHHHHHHhhccccCCc----------ceeeeCCCCC----CCCCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhhcCC-C
Q 041987          121 SFLLSIITRKAASDDK----------LEAKINPPLL----IFYSTPDRWVLGSTLLAASSLSVCVWNIIQVGTIKQYP-Q  185 (280)
Q Consensus       121 ~~il~~i~~~ek~~~~----------g~~ii~~~~~----~~~~~~~~~~~G~~~~l~aa~~~a~~~v~~~~~~~~~~-~  185 (280)
                      +++++.+++|||.+.+          |+++....+.    +......+...|+.+.+++.++.+...+.+++..++++ +
T Consensus       104 vmi~~~l~~~k~y~~~~~~~v~li~~Gv~~~~~~~~~~~~~~~~~~~~~~~G~~ll~~sl~~~a~~~~~qe~~~~~~~~~  183 (303)
T PF08449_consen  104 VMILGVLILGKRYSRRQYLSVLLITIGVAIFTLSDSSSSSSSNSSSFSSALGIILLLLSLLLDAFTGVYQEKLFKKYGKS  183 (303)
T ss_pred             HHHHHHHhcCccccHHHHHHHHHHHhhHheeeecccccccccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHhCCc
Confidence            9999999999999988          2222221111    11111122234999999999999999999999987754 4


Q ss_pred             chHHHHHHHHHHHHHHHHHHHh--hccccccccc--chhhHHHHHHHHHHHHHHHHHHHHHhhhhccCcceeccccchHH
Q 041987          186 VMKVVSFYSLAGTIQCSIFSLI--MERNINAWKL--KLNMELLLIIITAIFGSVIRSTVHVSCAEMKGHLYVPMFKPFGI  261 (280)
Q Consensus       186 ~~~~~~~~~~~~~i~~~~~~~~--~~~~~~~~~~--~~~~~~~~~~~~g~~~t~~~~~~~~~a~~~~~~~~~s~~~~l~p  261 (280)
                      +.+.+.+...++.+...+....  .++....+..  ..+..+..++...+ ...++....++..++.||...++...+.-
T Consensus       184 ~~~~mfy~n~~~~~~~~~~~~~l~~~~~~~~~~f~~~~p~~~~~l~~~s~-~~~~g~~~i~~~~~~~~al~~t~v~t~Rk  262 (303)
T PF08449_consen  184 PWELMFYTNLFSLPFLLILLFLLPTGEFRSAIRFISAHPSVLLYLLLFSL-TGALGQFFIFYLIKKFSALTTTIVTTLRK  262 (303)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhhHhhHHHHHHHHhHHHHHHHHHHHH-HHHHHHHHHHHHHHhcCchhhhhHHHHHH
Confidence            6788899999988888777765  2221111111  12223445454544 55677778888999999999999999999


Q ss_pred             HHHHHHHHHHhcCccccC
Q 041987          262 VFATAFGLTFFTNSLHYG  279 (280)
Q Consensus       262 v~a~~l~~~~l~E~it~~  279 (280)
                      .++.+++++++||++++.
T Consensus       263 ~~sillS~~~f~~~~~~~  280 (303)
T PF08449_consen  263 FLSILLSVIIFGHPLSPL  280 (303)
T ss_pred             HHHHHHHHHhcCCcCChH
Confidence            999999999999999875

; GO: 0055085 transmembrane transport

>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown

Probab=99.38  E-value=1.9e-12  Score=98.71  Aligned_cols=109  Identities=21%  Similarity=0.296  Sum_probs=94.5

Q ss_pred             HHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHhhhcccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 041987           23 GCTIGLTIVTKTAMNGGMSPFVFIAYTNALGSILLLPYSFFFHHRGSEAQPLFTLPLMLRFFFLGLTGVAISQNLAFFGL  102 (280)
Q Consensus        23 ~~wg~~~~~~k~~~~~~~~p~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~g~~~~~~~~~~~l  102 (280)
                      ++||...++.|...++ .||.+..++|+..+.+ ++++.... +++..  ++.+++++......|.++....+.++++|+
T Consensus         1 ~~~a~~~~~~k~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~-~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~   75 (126)
T PF00892_consen    1 FSWAIYSVFSKKLLKK-ISPLSITFWRFLIAGI-LLILLLIL-GRKPF--KNLSPRQWLWLLFLGLLGTALAYLLYFYAL   75 (126)
T ss_pred             ceeeeHHHHHHHHhcc-CCHHHHHHHHHHHHHH-HHHHHHhh-ccccc--cCCChhhhhhhhHhhccceehHHHHHHHHH
Confidence            4799999999999987 9999999999999998 66655554 44332  456677788888888887678999999999


Q ss_pred             hccchhHHHHhhhhhHHHHHHHHHHhhccccCCc
Q 041987          103 YYSSPIVVCVMGLLIPAISFLLSIITRKAASDDK  136 (280)
Q Consensus       103 ~~~~~~~a~vi~~~~P~~~~il~~i~~~ek~~~~  136 (280)
                      ++++++.++.+.++.|+++.+++++++|||++++
T Consensus        76 ~~~~~~~~~~~~~~~pv~~~i~~~~~~~e~~~~~  109 (126)
T PF00892_consen   76 KYISASIVSILQYLSPVFAAILGWLFLGERPSWR  109 (126)
T ss_pred             HhcchhHHHHHHHHHHHHHHHHHHHHcCCCCCHH
Confidence            9999999999999999999999999999999877

Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane

>COG2510 Predicted membrane protein [Function unknown]

Probab=99.33  E-value=9.5e-12  Score=92.71  Aligned_cols=120  Identities=17%  Similarity=0.074  Sum_probs=105.5

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHhhhcccCCCCCCCCCHHHHHHHHHHHHHHHH
Q 041987           13 VPFTLMVIMEGCTIGLTIVTKTAMNGGMSPFVFIAYTNALGSILLLPYSFFFHHRGSEAQPLFTLPLMLRFFFLGLTGVA   92 (280)
Q Consensus        13 ~~~l~~~~~~~~wg~~~~~~k~~~~~~~~p~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~g~~   92 (280)
                      ....+.++++++||...++.|...|+ +||....+.|..+...++..+.... ++.+. +...+.|.|..+...|+.+ .
T Consensus         3 ~~~~~ALLsA~fa~L~~iF~KIGl~~-vdp~~At~IRtiVi~~~l~~v~~~~-g~~~~-~~~~~~k~~lflilSGla~-g   78 (140)
T COG2510           3 AAIIYALLSALFAGLTPIFAKIGLEG-VDPDFATTIRTIVILIFLLIVLLVT-GNWQA-GGEIGPKSWLFLILSGLAG-G   78 (140)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHhccc-cCccHHHHHHHHHHHHHHHHHHHhc-Cceec-ccccCcceehhhhHHHHHH-H
Confidence            45788999999999999999999986 9999999999999999998888776 44322 1235778889899889776 4


Q ss_pred             HHHHHHHHHhhccchhHHHHhhhhhHHHHHHHHHHhhccccCCc
Q 041987           93 ISQNLAFFGLYYSSPIVVCVMGLLIPAISFLLSIITRKAASDDK  136 (280)
Q Consensus        93 ~~~~~~~~~l~~~~~~~a~vi~~~~P~~~~il~~i~~~ek~~~~  136 (280)
                      +...+||.+++..+++...-+-.+.|.++++++++++|||++.+
T Consensus        79 lswl~Yf~ALk~G~as~VvPldk~svvl~~lls~lfL~E~ls~~  122 (140)
T COG2510          79 LSWLLYFRALKKGKASRVVPLDKTSVVLAVLLSILFLGERLSLP  122 (140)
T ss_pred             HHHHHHHHHHhcCCcceEEEcccccHHHHHHHHHHHhcCCCCHH
Confidence            99999999999999999999999999999999999999999987

>KOG2765 consensus Predicted membrane protein [Function unknown]

Probab=99.33  E-value=3.3e-11  Score=105.28  Aligned_cols=187  Identities=12%  Similarity=0.081  Sum_probs=137.2

Q ss_pred             HHHHHHHHHHhhccchhHHHHhhhhhHHHHHHHHHHhhccccCCc----------ceeeeCCC--CCCCCCCCchhHHHH
Q 041987           92 AISQNLAFFGLYYSSPIVVCVMGLLIPAISFLLSIITRKAASDDK----------LEAKINPP--LLIFYSTPDRWVLGS  159 (280)
Q Consensus        92 ~~~~~~~~~~l~~~~~~~a~vi~~~~P~~~~il~~i~~~ek~~~~----------g~~ii~~~--~~~~~~~~~~~~~G~  159 (280)
                      +..++.+..|+.+|+++...++-.+.-+||..++.++..||.++.          |+.++...  ..++...+.+...|+
T Consensus       170 F~anl~~naALa~TsVAS~TilSStSs~FtL~la~if~~e~ft~sKllav~~si~GViiVt~~~s~~~~~~~a~~~llG~  249 (416)
T KOG2765|consen  170 FLANLTSNAALAFTSVASTTILSSTSSFFTLFLAAIFPVERFTLSKLLAVFVSIAGVIIVTMGDSKQNSDLPASRPLLGN  249 (416)
T ss_pred             HHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHcCcchhhHHHHHHHHHhhccEEEEEeccccccccCCccchhHHH
Confidence            457788999999999999999999999999999999999999987          33222221  112223456678999


Q ss_pred             HHHHHHHHHHHHHHHHHHhhhhcCCCchHHH-H--HHHHHHHHHHHHHHHhhcc-cccccccchhhHHHHHHHHHHHHHH
Q 041987          160 TLLAASSLSVCVWNIIQVGTIKQYPQVMKVV-S--FYSLAGTIQCSIFSLIMER-NINAWKLKLNMELLLIIITAIFGSV  235 (280)
Q Consensus       160 ~~~l~aa~~~a~~~v~~~~~~~~~~~~~~~~-~--~~~~~~~i~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~t~  235 (280)
                      ++++++|+.||.|+++.||-.++.+.-..+. +  +.-++..+++.|..++... ....+..+.......+++.+.++|+
T Consensus       250 llaL~sA~~YavY~vllk~~~~~eg~rvdi~lffGfvGLfnllllwP~l~iL~~~~~e~F~lP~~~q~~~vv~~~ligtv  329 (416)
T KOG2765|consen  250 LLALLSALLYAVYTVLLKRKIGDEGERVDIQLFFGFVGLFNLLLLWPPLIILDFFGEERFELPSSTQFSLVVFNNLIGTV  329 (416)
T ss_pred             HHHHHHHHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHHHhHHHHHHHHhccCcccCCCCceeEeeeHhhHHHHH
Confidence            9999999999999999988766653121111 1  1222333333333332111 1123444444456677888899999


Q ss_pred             HHHHHHHhhhhccCcceeccccchHHHHHHHHHHHHhcCcccc
Q 041987          236 IRSTVHVSCAEMKGHLYVPMFKPFGIVFATAFGLTFFTNSLHY  278 (280)
Q Consensus       236 ~~~~~~~~a~~~~~~~~~s~~~~l~pv~a~~l~~~~l~E~it~  278 (280)
                      ++=++|.+|+-..+|..+.+-+.++.+.|++.+.++=+.++|+
T Consensus       330 vSDylW~~a~~lTs~Lv~TlgmSltIPLA~~aD~l~k~~~~S~  372 (416)
T KOG2765|consen  330 VSDYLWAKAVLLTSPLVVTLGMSLTIPLAMFADVLIKGKHPSA  372 (416)
T ss_pred             HHHHHHHHHHHhccchhheeeeeEeeeHHHHHHHHHcCCCCCH
Confidence            9999999999999999999999999999999999888888775

>COG2510 Predicted membrane protein [Function unknown]

Probab=99.21  E-value=2.2e-10  Score=85.51  Aligned_cols=116  Identities=12%  Similarity=0.082  Sum_probs=100.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhhhcCCCchHHHHHHHHHHHHHHHHHHHhhcccccccccc---hhhHHHHHHHHHHHHH
Q 041987          158 GSTLLAASSLSVCVWNIIQVGTIKQYPQVMKVVSFYSLAGTIQCSIFSLIMERNINAWKLK---LNMELLLIIITAIFGS  234 (280)
Q Consensus       158 G~~~~l~aa~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~g~~~t  234 (280)
                      -.++++++|+.++...+..|--.++.+ |...+.....+..+.+..+....++    ++..   +.+.|..++..|+ .+
T Consensus         4 ~~~~ALLsA~fa~L~~iF~KIGl~~vd-p~~At~IRtiVi~~~l~~v~~~~g~----~~~~~~~~~k~~lflilSGl-a~   77 (140)
T COG2510           4 AIIYALLSALFAGLTPIFAKIGLEGVD-PDFATTIRTIVILIFLLIVLLVTGN----WQAGGEIGPKSWLFLILSGL-AG   77 (140)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhccccC-ccHHHHHHHHHHHHHHHHHHHhcCc----eecccccCcceehhhhHHHH-HH
Confidence            357899999999999999998888876 8888989988888887777665543    3333   5567888888886 88


Q ss_pred             HHHHHHHHhhhhccCcceeccccchHHHHHHHHHHHHhcCccccC
Q 041987          235 VIRSTVHVSCAEMKGHLYVPMFKPFGIVFATAFGLTFFTNSLHYG  279 (280)
Q Consensus       235 ~~~~~~~~~a~~~~~~~~~s~~~~l~pv~a~~l~~~~l~E~it~~  279 (280)
                      +.+..+|+++++...++++.++.-+.|++++++++++++|++|..
T Consensus        78 glswl~Yf~ALk~G~as~VvPldk~svvl~~lls~lfL~E~ls~~  122 (140)
T COG2510          78 GLSWLLYFRALKKGKASRVVPLDKTSVVLAVLLSILFLGERLSLP  122 (140)
T ss_pred             HHHHHHHHHHHhcCCcceEEEcccccHHHHHHHHHHHhcCCCCHH
Confidence            999999999999999999999999999999999999999999864

>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown

Probab=99.21  E-value=1.9e-11  Score=93.06  Aligned_cols=109  Identities=16%  Similarity=0.260  Sum_probs=91.1

Q ss_pred             HHHHHHHHHHHhhhhcCCCchHHHHHHHHHHHHHHHHHHHhhcccccccccchhhHHHHHHHHHHHHHHHHHHHHHhhhh
Q 041987          167 LSVCVWNIIQVGTIKQYPQVMKVVSFYSLAGTIQCSIFSLIMERNINAWKLKLNMELLLIIITAIFGSVIRSTVHVSCAE  246 (280)
Q Consensus       167 ~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~t~~~~~~~~~a~~  246 (280)
                      ++||.+.+..|+..++.+ +...+.+++..+++ ..+.....+...  ....+.+.+...++.+.+++++++.+++++++
T Consensus         1 ~~~a~~~~~~k~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~   76 (126)
T PF00892_consen    1 FSWAIYSVFSKKLLKKIS-PLSITFWRFLIAGI-LLILLLILGRKP--FKNLSPRQWLWLLFLGLLGTALAYLLYFYALK   76 (126)
T ss_pred             ceeeeHHHHHHHHhccCC-HHHHHHHHHHHHHH-HHHHHHhhcccc--ccCCChhhhhhhhHhhccceehHHHHHHHHHH
Confidence            478999999999999886 99999999999998 666665544321  22233345777788889889999999999999


Q ss_pred             ccCcceeccccchHHHHHHHHHHHHhcCccccC
Q 041987          247 MKGHLYVPMFKPFGIVFATAFGLTFFTNSLHYG  279 (280)
Q Consensus       247 ~~~~~~~s~~~~l~pv~a~~l~~~~l~E~it~~  279 (280)
                      +.++++++.+.+++|+++.++++++++|++++.
T Consensus        77 ~~~~~~~~~~~~~~pv~~~i~~~~~~~e~~~~~  109 (126)
T PF00892_consen   77 YISASIVSILQYLSPVFAAILGWLFLGERPSWR  109 (126)
T ss_pred             hcchhHHHHHHHHHHHHHHHHHHHHcCCCCCHH
Confidence            999999999999999999999999999999864

Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane

>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]

Probab=99.18  E-value=1.3e-09  Score=95.58  Aligned_cols=245  Identities=14%  Similarity=0.101  Sum_probs=174.3

Q ss_pred             HHHHHHHh--CCCChHHHHHHHHHHHHHHHHHHHhhhcccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccch
Q 041987           30 IVTKTAMN--GGMSPFVFIAYTNALGSILLLPYSFFFHHRGSEAQPLFTLPLMLRFFFLGLTGVAISQNLAFFGLYYSSP  107 (280)
Q Consensus        30 ~~~k~~~~--~~~~p~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~g~~~~~~~~~~~l~~~~~  107 (280)
                      ...|..++  +.--|..+...+...+.+.......++ .++..  +..++..+...+-+|++.. +.-.+-+.+++|.++
T Consensus        34 ~~nK~il~~~~f~~p~~lt~~~~~~~~l~~~v~~~l~-~~~~~--~~~~~~~~~~llpl~~~~~-~~~v~~n~Sl~~v~V  109 (316)
T KOG1441|consen   34 ILNKYILSKYGFPFPITLTMLHLFCGALALLVIKVLK-LVPPS--KISSKLPLRTLLPLGLVFC-ISHVLGNVSLSYVPV  109 (316)
T ss_pred             EeeHhhhccCCCCCccHHHHHHHHHHHHHHHHHHHhc-CCCCC--ccccccchHHHHHHHHHHH-HHHHhcchhhhccch
Confidence            44577766  446799999999999888887765554 33222  2223345667777787764 777888999999999


Q ss_pred             hHHHHhhhhhHHHHHHHHHHhhccccCCc---ce-eeeCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhh--
Q 041987          108 IVVCVMGLLIPAISFLLSIITRKAASDDK---LE-AKINPPLLIFYSTPDRWVLGSTLLAASSLSVCVWNIIQVGTIK--  181 (280)
Q Consensus       108 ~~a~vi~~~~P~~~~il~~i~~~ek~~~~---g~-~ii~~~~~~~~~~~~~~~~G~~~~l~aa~~~a~~~v~~~~~~~--  181 (280)
                      +....+=++.|.++.++++++.+|+.+..   .+ +++.+......+..+.+..|...++.+.++.+..+++.|++.+  
T Consensus       110 sF~q~iKa~~P~~tvl~~~~~~~~~~s~~~~lsL~piv~GV~ias~~e~~fn~~G~i~a~~s~~~~al~~I~~~~ll~~~  189 (316)
T KOG1441|consen  110 SFYQTIKALMPPFTVLLSVLLLGKTYSSMTYLSLLPIVFGVAIASVTELSFNLFGFISAMISNLAFALRNILSKKLLTSK  189 (316)
T ss_pred             hHHHHHHhhcchhHHHHHHHHhCCCCcceEEEEEEEeeeeEEEeeeccccccHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Confidence            99999999999999999999999999988   22 2333322222344556789999999999999999999999884  


Q ss_pred             cC-CCchHHHHHHHHHHHHHHH-HHHHhhccccc-c-cccchhhHHHHHHHHHHHHHHHHHHHHHhhhhccCcceecccc
Q 041987          182 QY-PQVMKVVSFYSLAGTIQCS-IFSLIMERNIN-A-WKLKLNMELLLIIITAIFGSVIRSTVHVSCAEMKGHLYVPMFK  257 (280)
Q Consensus       182 ~~-~~~~~~~~~~~~~~~i~~~-~~~~~~~~~~~-~-~~~~~~~~~~~~~~~g~~~t~~~~~~~~~a~~~~~~~~~s~~~  257 (280)
                      +. -+++....++.-++.+.++ |.....|++.. . ...++.......++.. .....-....+..+.+.+|..-++..
T Consensus       190 ~~~~~~~~ll~y~ap~s~~~Ll~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~s-v~~f~~Nls~f~~ig~tSalT~~V~g  268 (316)
T KOG1441|consen  190 GESLNSMNLLYYTAPISLIFLLIPFLDYVEGNKFVGFLTAPWFVTFLILLLNS-VLAFLLNLSAFLVIGRTSALTYSVAG  268 (316)
T ss_pred             ccccCchHHHHHhhhHHHHHHhcchHhhhcccceeeeeccccchhhHHHHHHH-HHHHHHHHHHHHHHcccCchhhhhhc
Confidence            22 1488888888888888888 77665554322 0 0001111222223333 24444556667788999999988888


Q ss_pred             chHHHHHHHHHHHHhcCccccC
Q 041987          258 PFGIVFATAFGLTFFTNSLHYG  279 (280)
Q Consensus       258 ~l~pv~a~~l~~~~l~E~it~~  279 (280)
                      ..--++.++.++++++|++|+.
T Consensus       269 ~~K~~~vi~~s~~iF~~pvt~~  290 (316)
T KOG1441|consen  269 HMKRIVVIVVSWLIFGNPVTFL  290 (316)
T ss_pred             cceEEEEEEeEeeeecCCCchh
Confidence            8888888888888888877754

>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter

Probab=99.15  E-value=1.4e-09  Score=93.69  Aligned_cols=122  Identities=21%  Similarity=0.261  Sum_probs=102.9

Q ss_pred             cchhhHHHHHHHHHHHHHHHHHHHHHHHhCCCChH--HHHHHHHHHHHHHHHHHHhhhcccCCCCCCCCCHHHHHHHHHH
Q 041987            9 EEEMVPFTLMVIMEGCTIGLTIVTKTAMNGGMSPF--VFIAYTNALGSILLLPYSFFFHHRGSEAQPLFTLPLMLRFFFL   86 (280)
Q Consensus         9 ~~~~~~~l~~~~~~~~wg~~~~~~k~~~~~~~~p~--~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (280)
                      .++.++..+.+++.++|+...+..|...++ .+|.  ....+|+.++.+++.++.... +++    +..+.+.+......
T Consensus       124 ~~~~~G~~~~l~a~~~~a~~~~~~k~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~----~~~~~~~~~~~~~~  197 (260)
T TIGR00950       124 SINPAGLLLGLGSGISFALGTVLYKRLVKK-EGPELLQFTGWVLLLGALLLLPFAWFL-GPN----PQALSLQWGALLYL  197 (260)
T ss_pred             cccHHHHHHHHHHHHHHHHHHHHHhHHhhc-CCchHHHHHHHHHHHHHHHHHHHHHhc-CCC----CCcchHHHHHHHHH
Confidence            345679999999999999999999999865 6644  555578999999998887654 332    22356677778888


Q ss_pred             HHHHHHHHHHHHHHHhhccchhHHHHhhhhhHHHHHHHHHHhhccccCCc
Q 041987           87 GLTGVAISQNLAFFGLYYSSPIVVCVMGLLIPAISFLLSIITRKAASDDK  136 (280)
Q Consensus        87 gl~g~~~~~~~~~~~l~~~~~~~a~vi~~~~P~~~~il~~i~~~ek~~~~  136 (280)
                      |.++..+.+.++++++++++++.++.+.++.|++++++++++++||++.+
T Consensus       198 ~~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~ll~~~~~~E~~~~~  247 (260)
T TIGR00950       198 GLIGTALAYFLWNKGLTLVDPSAASILALAEPLVALLLGLLILGETLSLP  247 (260)
T ss_pred             HHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhCCCCCHH
Confidence            88887789999999999999999999999999999999999999999876

>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles

Probab=98.99  E-value=8e-08  Score=82.11  Aligned_cols=201  Identities=14%  Similarity=0.067  Sum_probs=141.6

Q ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHhhhhhHHHHHHHHHHhhccccCCc---ce-------eeeCCC
Q 041987           75 FTLPLMLRFFFLGLTGVAISQNLAFFGLYYSSPIVVCVMGLLIPAISFLLSIITRKAASDDK---LE-------AKINPP  144 (280)
Q Consensus        75 ~~~~~~~~~~~~gl~g~~~~~~~~~~~l~~~~~~~a~vi~~~~P~~~~il~~i~~~ek~~~~---g~-------~ii~~~  144 (280)
                      .++|+.+++.+-+++- .+.+.+.+.++++.+++.-.++.++-.++|++++.+++|+|.+++   ++       .+....
T Consensus        12 ~~~~~~~~~~vPA~lY-~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~qW~aL~lL~~Gv~lv~~~   90 (244)
T PF04142_consen   12 KSPKDTLKLAVPALLY-AIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSRRQWLALFLLVAGVVLVQLS   90 (244)
T ss_pred             HhHHHHHHHHHHHHHH-HHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHheeecC
Confidence            3566778888888886 488999999999999999999999999999999999999999988   22       222211


Q ss_pred             --CC--CCCC-------CCchhHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCc-hHHHHHHHHHHHHHHHHHHHhhccc-
Q 041987          145 --LL--IFYS-------TPDRWVLGSTLLAASSLSVCVWNIIQVGTIKQYPQV-MKVVSFYSLAGTIQCSIFSLIMERN-  211 (280)
Q Consensus       145 --~~--~~~~-------~~~~~~~G~~~~l~aa~~~a~~~v~~~~~~~~~~~~-~~~~~~~~~~~~i~~~~~~~~~~~~-  211 (280)
                        ..  +..+       .......|.+..++++++-++..|+.+|..|+.+.+ ...+...+..|.++.++.....+.+ 
T Consensus        91 ~~~~~~~~~~~~~~~~~~~~~~~~G~~~vl~~~~~S~~agVy~E~~lK~~~~s~~~~N~qL~~~gi~~~~~~~~~~~~~~  170 (244)
T PF04142_consen   91 SSQSSDNSSSSSVHHDASNQNPLLGLLAVLAAAFLSGFAGVYFEKLLKRSNVSLWIQNMQLYLFGILFNLLALLLSDGSA  170 (244)
T ss_pred             CccccccccccccccccccchhHhHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHHhcccccc
Confidence              11  0000       123457999999999999999999999999875423 4455556777777766655443221 


Q ss_pred             ccccccchhhHHHHHHHHHHHHHHHHHHHHHhhhhccCcceeccccchHHHHHHHHHHHHhcCcccc
Q 041987          212 INAWKLKLNMELLLIIITAIFGSVIRSTVHVSCAEMKGHLYVPMFKPFGIVFATAFGLTFFTNSLHY  278 (280)
Q Consensus       212 ~~~~~~~~~~~~~~~~~~g~~~t~~~~~~~~~a~~~~~~~~~s~~~~l~pv~a~~l~~~~l~E~it~  278 (280)
                      ..+...-.  ++-...+.-++..+++=.+....+|+.+...=+.......+.+.+.++.++|+++|.
T Consensus       171 ~~~~g~f~--G~~~~~~~~i~~~a~gGllva~v~KyadnI~K~fa~a~siv~t~~~s~~lf~~~~s~  235 (244)
T PF04142_consen  171 ISESGFFH--GYSWWVWIVIFLQAIGGLLVAFVLKYADNIVKGFATAVSIVLTAVLSVLLFGFPPSL  235 (244)
T ss_pred             cccCCchh--hcchHHHHHHHHHHHhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhCCCCch
Confidence            11111111  111111222333333436667788999998888888999999999999999999986

P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane

>PF13536 EmrE: Multidrug resistance efflux transporter

Probab=98.91  E-value=1.8e-09  Score=81.42  Aligned_cols=88  Identities=22%  Similarity=0.269  Sum_probs=70.2

Q ss_pred             HHHHHHHHHHHHHHHhhhcccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHhhhhhHHHHHHHHH
Q 041987           47 AYTNALGSILLLPYSFFFHHRGSEAQPLFTLPLMLRFFFLGLTGVAISQNLAFFGLYYSSPIVVCVMGLLIPAISFLLSI  126 (280)
Q Consensus        47 ~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~g~~~~~~~~~~~l~~~~~~~a~vi~~~~P~~~~il~~  126 (280)
                      .+|+..+.+.+..+...+ +|.++..+..+++++.+....|.++...++.++++|++|++ +.++.+.+++|+++.+++.
T Consensus         2 a~r~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~-~~v~~i~~~~pi~~~ll~~   79 (113)
T PF13536_consen    2 AFRYLFSVLFLLIILLIR-GRLRDLFRALRRKPWLWLILAGLLGFGVAYLLFFYALSYAP-ALVAAIFSLSPIFTALLSW   79 (113)
T ss_pred             HHHHHHHHHHHHHHHHHH-ccHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHH
Confidence            589999999999887775 44212112233445666777788886688999999999999 5888999999999999999


Q ss_pred             HhhccccCCc
Q 041987          127 ITRKAASDDK  136 (280)
Q Consensus       127 i~~~ek~~~~  136 (280)
                      +++|||++++
T Consensus        80 ~~~~er~~~~   89 (113)
T PF13536_consen   80 LFFKERLSPR   89 (113)
T ss_pred             HHhcCCCCHH
Confidence            9999999988

>PRK10532 threonine and homoserine efflux system; Provisional

Probab=98.77  E-value=4.6e-07  Score=79.74  Aligned_cols=135  Identities=12%  Similarity=0.106  Sum_probs=104.1

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHhhhcccCCCCCCCCCHHHHHHHHHHHHHHH
Q 041987           12 MVPFTLMVIMEGCTIGLTIVTKTAMNGGMSPFVFIAYTNALGSILLLPYSFFFHHRGSEAQPLFTLPLMLRFFFLGLTGV   91 (280)
Q Consensus        12 ~~~~l~~~~~~~~wg~~~~~~k~~~~~~~~p~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~g~   91 (280)
                      ..+.+..+.++++|+...+..|...++ .+|....... ..+.+++.++.... ..  .  ...+...+......|+++.
T Consensus       147 ~~G~ll~l~aa~~~a~~~v~~r~~~~~-~~~~~~~~~~-~~~~~~l~~~~~~~-~~--~--~~~~~~~~~~~l~lgv~~t  219 (293)
T PRK10532        147 LTGAALALGAGACWAIYILSGQRAGAE-HGPATVAIGS-LIAALIFVPIGALQ-AG--E--ALWHWSILPLGLAVAILST  219 (293)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHhcc-CCchHHHHHH-HHHHHHHHHHHHHc-cC--c--ccCCHHHHHHHHHHHHHHH
Confidence            458999999999999999999998765 7888876555 55566666765543 22  1  2244555555667888888


Q ss_pred             HHHHHHHHHHhhccchhHHHHhhhhhHHHHHHHHHHhhccccCCcceeeeCCCCCCCCCCCchhHHHHHHHHHHHHHHHH
Q 041987           92 AISQNLAFFGLYYSSPIVVCVMGLLIPAISFLLSIITRKAASDDKLEAKINPPLLIFYSTPDRWVLGSTLLAASSLSVCV  171 (280)
Q Consensus        92 ~~~~~~~~~~l~~~~~~~a~vi~~~~P~~~~il~~i~~~ek~~~~g~~ii~~~~~~~~~~~~~~~~G~~~~l~aa~~~a~  171 (280)
                      .+.+.++++++++++++.++.+.++.|++..++++++++|+++..                  ...|..+.+.+++....
T Consensus       220 ~~~~~l~~~~~~~~~a~~as~~~~l~Pv~a~l~~~l~lgE~~~~~------------------~~iG~~lIl~~~~~~~~  281 (293)
T PRK10532        220 ALPYSLEMIALTRLPTRTFGTLMSMEPALAAVSGMIFLGETLTLI------------------QWLALGAIIAASMGSTL  281 (293)
T ss_pred             HHHHHHHHHHHHhcChhHHHHHHHhHHHHHHHHHHHHhCCCCcHH------------------HHHHHHHHHHHHHHHHh
Confidence            888899999999999999999999999999999999999998543                  34566666666665543

>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional

Probab=98.75  E-value=2.6e-07  Score=81.29  Aligned_cols=122  Identities=15%  Similarity=0.049  Sum_probs=99.7

Q ss_pred             chhhHHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHhhhcccCCCCCCCCCHHHHHHHHHHHHH
Q 041987           10 EEMVPFTLMVIMEGCTIGLTIVTKTAMNGGMSPFVFIAYTNALGSILLLPYSFFFHHRGSEAQPLFTLPLMLRFFFLGLT   89 (280)
Q Consensus        10 ~~~~~~l~~~~~~~~wg~~~~~~k~~~~~~~~p~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~   89 (280)
                      ++..+.++.+.++++|+...+..|...+  -++.....+++.++.+++.++.... +....  ...+.+.+......|++
T Consensus       147 ~~~~G~l~~l~a~~~~a~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~--~~~~~~~~~~i~~l~i~  221 (292)
T PRK11272        147 GNPWGAILILIASASWAFGSVWSSRLPL--PVGMMAGAAEMLAAGVVLLIASLLS-GERLT--ALPTLSGFLALGYLAVF  221 (292)
T ss_pred             cchHHHHHHHHHHHHHHHHHHHHHhcCC--CcchHHHHHHHHHHHHHHHHHHHHc-CCccc--ccCCHHHHHHHHHHHHH
Confidence            3457999999999999999999998643  2456677889999999888876554 32211  22355678888888988


Q ss_pred             HHHHHHHHHHHHhhccchhHHHHhhhhhHHHHHHHHHHhhccccCCc
Q 041987           90 GVAISQNLAFFGLYYSSPIVVCVMGLLIPAISFLLSIITRKAASDDK  136 (280)
Q Consensus        90 g~~~~~~~~~~~l~~~~~~~a~vi~~~~P~~~~il~~i~~~ek~~~~  136 (280)
                      +..+.+.++++++++.+++.++++.++.|++.+++++++++|+++..
T Consensus       222 ~s~~~~~l~~~~~~~~~~~~~s~~~~l~Pi~a~i~~~~~l~E~~t~~  268 (292)
T PRK11272        222 GSIIAISAYMYLLRNVRPALATSYAYVNPVVAVLLGTGLGGETLSPI  268 (292)
T ss_pred             HHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCCcHH
Confidence            87788999999999999999999999999999999999999998654

>PRK15430 putative chloramphenical resistance permease RarD; Provisional

Probab=98.72  E-value=1e-07  Score=84.08  Aligned_cols=123  Identities=7%  Similarity=-0.031  Sum_probs=95.1

Q ss_pred             chhHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCchHHHHHHHHHHHHHHHHHHHhhccccccc--ccchhhHHHHHHHHH
Q 041987          153 DRWVLGSTLLAASSLSVCVWNIIQVGTIKQYPQVMKVVSFYSLAGTIQCSIFSLIMERNINAW--KLKLNMELLLIIITA  230 (280)
Q Consensus       153 ~~~~~G~~~~l~aa~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~g  230 (280)
                      ++...|..+.++++++|+...+..|.. ++.+ |.+...+++.++.+...++.....+ ....  ...+...+.. ...+
T Consensus         4 ~~~~~g~~~~l~a~~~wg~~~~~~k~~-~~~~-~~~~~~~R~~~a~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~-~~~~   79 (296)
T PRK15430          4 KQTRQGVLLALAAYFIWGIAPAYFKLI-YYVP-ADEILTHRVIWSFFFMVVLMSICRQ-WSYLKTLIQTPQKIFM-LAVS   79 (296)
T ss_pred             hhhhhHHHHHHHHHHHHHHHHHHHHHh-cCCC-HHHHHHHHHHHHHHHHHHHHHHHcc-HHHHHHHHcCHHHHHH-HHHH
Confidence            355689999999999999999999764 6676 9999999999998877766543221 0010  0111222322 3356


Q ss_pred             HHHHHHHHHHHHhhhhccCcceeccccchHHHHHHHHHHHHhcCccccC
Q 041987          231 IFGSVIRSTVHVSCAEMKGHLYVPMFKPFGIVFATAFGLTFFTNSLHYG  279 (280)
Q Consensus       231 ~~~t~~~~~~~~~a~~~~~~~~~s~~~~l~pv~a~~l~~~~l~E~it~~  279 (280)
                      .++.+..+.++++++++.+++.+++..++.|++..++++++++|+++..
T Consensus        80 ~~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E~~~~~  128 (296)
T PRK15430         80 AVLIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGERFRRM  128 (296)
T ss_pred             HHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCCCcHH
Confidence            6677889999999999999999999999999999999999999999864

>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]

Probab=98.70  E-value=3.8e-06  Score=72.74  Aligned_cols=260  Identities=13%  Similarity=0.114  Sum_probs=177.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHH--HHHHHHHHHHHHHHhhhcccCCCCCCCCCHHHHHHHHHHHHHHH
Q 041987           14 PFTLMVIMEGCTIGLTIVTKTAMNGGMSPFVFIA--YTNALGSILLLPYSFFFHHRGSEAQPLFTLPLMLRFFFLGLTGV   91 (280)
Q Consensus        14 ~~l~~~~~~~~wg~~~~~~k~~~~~~~~p~~~~~--~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~g~   91 (280)
                      +....+.-.+.--.+.+.-|..+...--|..+..  +..+...+.+...-..   |-.+. ++.+++..++..-..++..
T Consensus        13 ~l~sa~~Y~~sS~lm~vvNK~vls~y~f~~~l~l~~~Q~l~s~~~v~~lk~~---~lv~~-~~l~~~~~kk~~P~~~lf~   88 (314)
T KOG1444|consen   13 PLLSALFYCLSSILMTVVNKIVLSSYNFPMGLLLMLLQSLASVLVVLVLKRL---GLVNF-RPLDLRTAKKWFPVSLLFV   88 (314)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHh---ceeec-CCcChHHHHHHccHHHHHH
Confidence            3444444444445566777888765444444444  7887777766555322   21221 4567777777777777764


Q ss_pred             HHHHHHHHHHhhccchhHHHHhhhhhHHHHHHHHHHhhccccCCc---ce-eeeCCCCCCCCCCCchhHHHHHHHHHHHH
Q 041987           92 AISQNLAFFGLYYSSPIVVCVMGLLIPAISFLLSIITRKAASDDK---LE-AKINPPLLIFYSTPDRWVLGSTLLAASSL  167 (280)
Q Consensus        92 ~~~~~~~~~~l~~~~~~~a~vi~~~~P~~~~il~~i~~~ek~~~~---g~-~ii~~~~~~~~~~~~~~~~G~~~~l~aa~  167 (280)
                       .+...-..+++|.+...-.++=...|+++++....++|.|++.+   .+ +++.+...........+..|-.|++...+
T Consensus        89 -~~i~t~~~slk~lnVpm~tv~kn~tii~~ai~E~lf~~~~~~~~v~~Sv~~m~~~s~~~~~~d~sf~~~gY~w~~~n~~  167 (314)
T KOG1444|consen   89 -GMLFTGSKSLKYLNVPMFTVFKNLTIILTAIGEVLFFGKRPSNKVWASVFAMIIGSVAAAFTDLSFNLRGYSWALANCL  167 (314)
T ss_pred             -HHHHHccccccccCchHHHHHhhchHHHHHHhHHhhcCcCchhhHHHHHHHHHHHHHhhccccceecchhHHHHHHHHH
Confidence             67778889999999999999999999999999999999888777   22 22222211112223333458899999999


Q ss_pred             HHHHHHHHHHhhhhcCC-CchHHHHHHHHHHHHHHHHHHHhhcc-c-c-cccc-cchhhHHHHHHHHHHHHHHHHHHHHH
Q 041987          168 SVCVWNIIQVGTIKQYP-QVMKVVSFYSLAGTIQCSIFSLIMER-N-I-NAWK-LKLNMELLLIIITAIFGSVIRSTVHV  242 (280)
Q Consensus       168 ~~a~~~v~~~~~~~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~-~-~-~~~~-~~~~~~~~~~~~~g~~~t~~~~~~~~  242 (280)
                      +-+.+.+..|+..+..+ +...++.+..+.+.........+.++ + . .+.+ ......+..+...++++-++.|.. .
T Consensus       168 ~~a~~~v~~kk~vd~~~l~~~~lv~yNnl~~L~~l~~~~~~~ge~~~l~~~~~~~~~~~~~~~~~lScv~gf~isy~s-~  246 (314)
T KOG1444|consen  168 TTAAFVVYVKKSVDSANLNKFGLVFYNNLLSLPPLLILSFITGELDALSLNFDNWSDSSVLVVMLLSCVMGFGISYTS-F  246 (314)
T ss_pred             HHHHHHHHHHHhhccccccceeEEeehhHHHHHHHHHHHHHhcchHHHHhhcccccchhHHHHHHHHHHHHHHHHHHH-H
Confidence            99999999988765422 25567888888888877776665543 1 0 0110 111223667778888887777655 5


Q ss_pred             hhhhccCcceeccccchHHHHHHHHHHHHhcCccccC
Q 041987          243 SCAEMKGHLYVPMFKPFGIVFATAFGLTFFTNSLHYG  279 (280)
Q Consensus       243 ~a~~~~~~~~~s~~~~l~pv~a~~l~~~~l~E~it~~  279 (280)
                      +..+..+++..++.....-..+.+...++.|+++++.
T Consensus       247 ~ct~~~SAtT~tivG~~n~l~t~l~~ll~~d~~~~~~  283 (314)
T KOG1444|consen  247 LCTRVNSATTTTIVGAKNKLLTYLGGLLFGDKPFTFL  283 (314)
T ss_pred             HHHhhccccceeehhhhhhHHHHHHHHhcCCceechh
Confidence            6899999999999997777778888888888888764

>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]

Probab=98.66  E-value=1.6e-05  Score=69.96  Aligned_cols=259  Identities=12%  Similarity=0.074  Sum_probs=177.7

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHhCC---CChHHHHHHHHHHHHHHHHHHHhhhcccC--CCCCCC------CCHHHHH
Q 041987           13 VPFTLMVIMEGCTIGLTIVTKTAMNGG---MSPFVFIAYTNALGSILLLPYSFFFHHRG--SEAQPL------FTLPLML   81 (280)
Q Consensus        13 ~~~l~~~~~~~~wg~~~~~~k~~~~~~---~~p~~~~~~R~~~a~l~l~~~~~~~~~~~--~~~~~~------~~~~~~~   81 (280)
                      .-.+.++...+.++......|.+-..+   ..|...++.--++-.+++....+.. .|+  ++..+.      .++++.+
T Consensus        15 ~k~~~l~~~t~~~~~l~l~l~ys~~~~~~~f~~tt~v~~~Ei~Kl~~c~~~~~~~-~~~~~~~~~~~l~~~i~~~~~~~l   93 (345)
T KOG2234|consen   15 MKYLSLIVLTAQNTALTLLLRYSRTREKPMFLPTTAVFLTEVIKLVFCLFLLLFE-ERKYAKKSLKSLSKEILAAPRETL   93 (345)
T ss_pred             HHHHHHHHHHHHHhhHHHHHHHHhcCCCCCcchhHHHHHHHHHHHHHHHHHHHHH-hhHHhhhhhhhcCHHHHhChHHHH
Confidence            456667777889999999999997665   6788888888888877777766654 322  111011      1245667


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhccchhHHHHhhhhhHHHHHHHHHHhhccccCCc----------ceeeeCCC-----CC
Q 041987           82 RFFFLGLTGVAISQNLAFFGLYYSSPIVVCVMGLLIPAISFLLSIITRKAASDDK----------LEAKINPP-----LL  146 (280)
Q Consensus        82 ~~~~~gl~g~~~~~~~~~~~l~~~~~~~a~vi~~~~P~~~~il~~i~~~ek~~~~----------g~~ii~~~-----~~  146 (280)
                      +..+-+++- ++.+.+.|.++.+.+++.-.+..++--+.|+++..++++||.+++          |+++....     ..
T Consensus        94 k~~vPa~iY-alqNnl~yval~~ldaatyqVt~qlKI~tTA~f~vl~L~rkLs~~Qw~Al~lL~~Gv~~vQ~~~~~~~~a  172 (345)
T KOG2234|consen   94 KVSVPALIY-ALQNNLQYVALSNLDAATYQVTYQLKILTTAIFSVLILRRKLSRLQWMALVLLFAGVALVQLPSLSPTGA  172 (345)
T ss_pred             HHHHHHHHH-HHhhhHHHHHHhcCCchhhhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhccCCCCCCc
Confidence            777777765 477789999999999999999999999999999999999999987          33333311     11


Q ss_pred             CCCCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhhcCCC-chHHHHHHHHHHHHHHHHHHHhhcccccccc----cchhh
Q 041987          147 IFYSTPDRWVLGSTLLAASSLSVCVWNIIQVGTIKQYPQ-VMKVVSFYSLAGTIQCSIFSLIMERNINAWK----LKLNM  221 (280)
Q Consensus       147 ~~~~~~~~~~~G~~~~l~aa~~~a~~~v~~~~~~~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~----~~~~~  221 (280)
                      .......+...|....+.+++.-++..++..|+.|+-+. .+..+...+++|.++.+...+..+.....|.    -.+..
T Consensus       173 ~~~~~~~n~~~G~~avl~~c~~SgfAgvYfEkiLK~s~~s~wi~NiqL~~~g~~f~~l~~~~~d~~~i~~~gff~G~s~~  252 (345)
T KOG2234|consen  173 KSESSAQNPFLGLVAVLVACFLSGFAGVYFEKILKGSNVSLWIRNIQLYFFGILFNLLTILLQDGEAINEYGFFYGYSSI  252 (345)
T ss_pred             cCCCcccchhhhHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhhccccccccCCccccccHH
Confidence            112345667899999999999999999999999987432 3445555567777776666554432111111    11112


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhhhccCcceeccccchHHHHHHHHHHHHhcCcccc
Q 041987          222 ELLLIIITAIFGSVIRSTVHVSCAEMKGHLYVPMFKPFGIVFATAFGLTFFTNSLHY  278 (280)
Q Consensus       222 ~~~~~~~~g~~~t~~~~~~~~~a~~~~~~~~~s~~~~l~pv~a~~l~~~~l~E~it~  278 (280)
                      .|..++..++     +=.+-...+|+.+--.=+....+..+++.+.++.++|-++|+
T Consensus       253 vw~vVl~~a~-----gGLlvs~v~KyADnIlK~f~~s~aiilt~v~S~~Lf~~~~t~  304 (345)
T KOG2234|consen  253 VWLVVLLNAV-----GGLLVSLVMKYADNILKGFSTSVAIILTTVASIALFDFQLTL  304 (345)
T ss_pred             HHHHHHHHhc-----cchhHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHccCCchH
Confidence            2444443433     334555566777766666666678888999998888888875

>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=98.66  E-value=9e-06  Score=69.85  Aligned_cols=233  Identities=11%  Similarity=0.039  Sum_probs=156.9

Q ss_pred             CChHHHHHHHHHHHHHHHHHHHhhhcccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHhhhhhHH
Q 041987           40 MSPFVFIAYTNALGSILLLPYSFFFHHRGSEAQPLFTLPLMLRFFFLGLTGVAISQNLAFFGLYYSSPIVVCVMGLLIPA  119 (280)
Q Consensus        40 ~~p~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~g~~~~~~~~~~~l~~~~~~~a~vi~~~~P~  119 (280)
                      -+|..+.+..-+.+.+.-......   +++..+++.   .|+++...++... +..+|-+.|++|.+=-.-.+-=..=-+
T Consensus        49 ~~~~fL~~~q~l~~~~~s~~~l~~---~k~~~~~~a---pl~~y~~is~tn~-~s~~~~yeaLKyvSyPtq~LaKscKmI  121 (327)
T KOG1581|consen   49 EHSLFLVFCQRLVALLVSYAMLKW---WKKELSGVA---PLYKYSLISFTNT-LSSWCGYEALKYVSYPTQTLAKSCKMI  121 (327)
T ss_pred             cccHHHHHHHHHHHHHHHHHHHhc---ccccCCCCC---chhHHhHHHHHhh-cchHHHHHHHHhccchHHHHHHHhhhh
Confidence            356677777777776655333322   222211333   3666777777765 788899999999864322222222233


Q ss_pred             HHHHHHHHhhccccCCc----------ceee--eCCCCC-CCCCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhhcCC-C
Q 041987          120 ISFLLSIITRKAASDDK----------LEAK--INPPLL-IFYSTPDRWVLGSTLLAASSLSVCVWNIIQVGTIKQYP-Q  185 (280)
Q Consensus       120 ~~~il~~i~~~ek~~~~----------g~~i--i~~~~~-~~~~~~~~~~~G~~~~l~aa~~~a~~~v~~~~~~~~~~-~  185 (280)
                      -+++.+.++.|+|.+.+          |+.+  +..... ....+.++...|..+....-+.=++-+..++++-+++. +
T Consensus       122 PVmlmg~Lvy~~ky~~~eYl~~~LIs~GvsiF~l~~~s~s~~~~g~~ns~~G~~Ll~~~L~fDgfTn~tQd~lf~~~k~s  201 (327)
T KOG1581|consen  122 PVMLMGTLVYGRKYSSFEYLVAFLISLGVSIFSLFPNSDSSSKSGRENSPIGILLLFGYLLFDGFTNATQDSLFKKYKVS  201 (327)
T ss_pred             HHHHHHHHHhcCccCcHHHHHHHHHHhheeeEEEecCCCCccccCCCCchHhHHHHHHHHHHHhhHHhHHHHHhccCCcc
Confidence            34588899999999988          2211  111111 12234456789999999888888888888998887653 4


Q ss_pred             chHHHHHHHHHHHHHHHHHHHhhccccc--ccccchhhHHHHHHHHHHHHHHHHHHHHHhhhhccCcceeccccchHHHH
Q 041987          186 VMKVVSFYSLAGTIQCSIFSLIMERNIN--AWKLKLNMELLLIIITAIFGSVIRSTVHVSCAEMKGHLYVPMFKPFGIVF  263 (280)
Q Consensus       186 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~g~~~t~~~~~~~~~a~~~~~~~~~s~~~~l~pv~  263 (280)
                      +..++....+++++.........+....  ++.-..+.-+.-++.... +.++++.+.++-+++-|+-.-..+..+.=.+
T Consensus       202 ~~~mM~~vNLf~~i~~~~~li~qg~~~~av~F~~~hp~~~~Di~l~s~-~gavGQ~FI~~TI~~FGslt~t~I~ttRk~~  280 (327)
T KOG1581|consen  202 SLHMMFGVNLFSAILNGTYLILQGHLLPAVSFIKEHPDVAFDILLYST-CGAVGQLFIFYTIERFGSLTFTTIMTTRKMV  280 (327)
T ss_pred             HhHHHHHHHHHHHHHHHHhhhcCCCCchHHHHHHcChhHHHHHHHHHH-hhhhhhheehhhHhhcccHHHHHHHHHHHHH
Confidence            7889999999999988776443332111  111112223555566666 4568999999999999999999999999999


Q ss_pred             HHHHHHHHhcCccccCC
Q 041987          264 ATAFGLTFFTNSLHYGR  280 (280)
Q Consensus       264 a~~l~~~~l~E~it~~~  280 (280)
                      ++.++.+++|+++++.|
T Consensus       281 si~lS~i~f~h~~s~~q  297 (327)
T KOG1581|consen  281 SIMLSCIVFGHPLSSEQ  297 (327)
T ss_pred             HHHHHHHHhCCccchhh
Confidence            99999999999998753

>KOG2766 consensus Predicted membrane protein [Function unknown]

Probab=98.62  E-value=3.1e-07  Score=76.79  Aligned_cols=246  Identities=13%  Similarity=0.065  Sum_probs=169.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHhhhcccCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 041987           17 LMVIMEGCTIGLTIVTKTAMNGGMSPFVFIAYTNALGSILLLPYSFFFHHRGSEAQPLFTLPLMLRFFFLGLTGVAISQN   96 (280)
Q Consensus        17 ~~~~~~~~wg~~~~~~k~~~~~~~~p~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~g~~~~~~   96 (280)
                      ..+++.++=+..+.....+-.+--.|..=.+.-..+=+++-.++..++  |+.   .+.+   |..++++|++.. =.++
T Consensus        23 GQiLSL~~t~~a~tss~la~k~iN~Pt~QtFl~Y~LLalVY~~~~~fR--~~~---~~~~---~~hYilla~~DV-EaNy   93 (336)
T KOG2766|consen   23 GQILSLLITSTAFTSSELARKGINAPTSQTFLNYVLLALVYGPIMLFR--RKY---IKAK---WRHYILLAFVDV-EANY   93 (336)
T ss_pred             HHHHHHHHHcchhhhHHHHhccCCCccHHHHHHHHHHHHHHhhHHHhh--hHH---HHHH---HHHhhheeEEee-cccE
Confidence            445566666666666666643224577778888888888888887764  332   2344   444777888776 4566


Q ss_pred             HHHHHhhccchhHHHHhhhhhHHHHHHHHHHhhccccCCc---ceee-------e-CC-CCCCCCCCCchhHHHHHHHHH
Q 041987           97 LAFFGLYYSSPIVVCVMGLLIPAISFLLSIITRKAASDDK---LEAK-------I-NP-PLLIFYSTPDRWVLGSTLLAA  164 (280)
Q Consensus        97 ~~~~~l~~~~~~~a~vi~~~~P~~~~il~~i~~~ek~~~~---g~~i-------i-~~-~~~~~~~~~~~~~~G~~~~l~  164 (280)
                      +...|.|||+-.....+-.-.-..+.+++|+++|.|-++.   |+.+       + .. .+.++..++.++..||++.+.
T Consensus        94 ~vV~AyQyTsmtSi~lLDcwaip~v~~lsw~fLktrYrlmki~gV~iCi~GvvmvV~sDV~agd~aggsnp~~GD~lvi~  173 (336)
T KOG2766|consen   94 FVVKAYQYTSMTSIMLLDCWAIPCVLVLSWFFLKTRYRLMKISGVVICIVGVVMVVFSDVHAGDRAGGSNPVKGDFLVIA  173 (336)
T ss_pred             EEeeehhhcchHHHHHHHHhhhHHHHHHHHHHHHHHHhhheeeeEEeEecceEEEEEeeeccccccCCCCCccCcEEEEe
Confidence            7888999999887777765444456789999999998876   5422       1 11 123345567788999999999


Q ss_pred             HHHHHHHHHHHHHhhhhcCCCchHHHHHHHHHHHHHHHHHHHhhcc-cccccccchhhHHHHHHHHHHHHHHHHHHHHHh
Q 041987          165 SSLSVCVWNIIQVGTIKQYPQVMKVVSFYSLAGTIQCSIFSLIMER-NINAWKLKLNMELLLIIITAIFGSVIRSTVHVS  243 (280)
Q Consensus       165 aa~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~t~~~~~~~~~  243 (280)
                      +|.+||..++....+.|+.+ ..+.+....++|+++...- .+.+. +....  +++......+- ...+.++=|.+.-.
T Consensus       174 GATlYaVSNv~EEflvkn~d-~~elm~~lgLfGaIIsaIQ-~i~~~~~~~tl--~w~~~i~~yl~-f~L~MFllYsl~pi  248 (336)
T KOG2766|consen  174 GATLYAVSNVSEEFLVKNAD-RVELMGFLGLFGAIISAIQ-FIFERHHVSTL--HWDSAIFLYLR-FALTMFLLYSLAPI  248 (336)
T ss_pred             cceeeeeccccHHHHHhcCc-HHHHHHHHHHHHHHHHHHH-HhhhccceeeE--eehHHHHHHHH-HHHHHHHHHHhhHH
Confidence            99999999999999888886 7788888888999987665 44444 22222  22212222121 23355566667777


Q ss_pred             hhhccCcceeccccchHHHHHHHHHHHHhcCcccc
Q 041987          244 CAEMKGHLYVPMFKPFGIVFATAFGLTFFTNSLHY  278 (280)
Q Consensus       244 a~~~~~~~~~s~~~~l~pv~a~~l~~~~l~E~it~  278 (280)
                      .+|.-+++...+-....-.|+.++  ..+|-++.|
T Consensus       249 l~k~~~aT~~nlslLTsDmwsl~i--~~FgYhv~w  281 (336)
T KOG2766|consen  249 LIKTNSATMFNLSLLTSDMWSLLI--RTFGYHVDW  281 (336)
T ss_pred             heecCCceEEEhhHhHHHHHHHHH--HHHhcchhh
Confidence            789999999999999999999888  445544544

>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein

Probab=98.60  E-value=4.8e-07  Score=79.13  Aligned_cols=116  Identities=13%  Similarity=0.090  Sum_probs=84.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHhhhhcCCCchHHHHHHHHHHHHHHHHHHHhhcccccccccchhhHHHHHHHHHHHHHHHHH
Q 041987          159 STLLAASSLSVCVWNIIQVGTIKQYPQVMKVVSFYSLAGTIQCSIFSLIMERNINAWKLKLNMELLLIIITAIFGSVIRS  238 (280)
Q Consensus       159 ~~~~l~aa~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~t~~~~  238 (280)
                      .++.+.++++||...+..|+..++.+ +  ...+....+++...|........ ..|.....+.+.. ...+.++....+
T Consensus         3 ~~~~~~aa~~~a~~~~~~k~~~~~~~-~--~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~   77 (281)
T TIGR03340         3 LTLVVFSALMHAGWNLMAKSHADKEP-D--FLWWALLAHSVLLTPYGLWYLAQ-VGWSRLPATFWLL-LAISAVANMVYF   77 (281)
T ss_pred             HHHHHHHHHHHHHHHHHHhhcCCchh-H--HHHHHHHHHHHHHHHHHHHhccc-CCCCCcchhhHHH-HHHHHHHHHHHH
Confidence            36789999999999999997766533 3  34555566666666665532111 1233322233333 334455778899


Q ss_pred             HHHHhhhhccCcceeccccchHHHHHHHHHHHHhcCccccC
Q 041987          239 TVHVSCAEMKGHLYVPMFKPFGIVFATAFGLTFFTNSLHYG  279 (280)
Q Consensus       239 ~~~~~a~~~~~~~~~s~~~~l~pv~a~~l~~~~l~E~it~~  279 (280)
                      .++++++++.+++.++++.+.+|+++.+++++++||+++..
T Consensus        78 ~~~~~a~~~~~~~~~~~l~~~~p~~~~l~~~~~~~e~~~~~  118 (281)
T TIGR03340        78 LGLAQAYHHADVGLVYPLARSSPLLVAIWATLTLGETLSPL  118 (281)
T ss_pred             HHHHHHHhcCChhhhhhHHhhhHHHHHHHHHHHHcCCCCHH
Confidence            99999999999999999999999999999999999999864

This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.

>TIGR00688 rarD rarD protein

Probab=98.60  E-value=2.9e-07  Score=79.34  Aligned_cols=120  Identities=9%  Similarity=0.022  Sum_probs=92.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhhhcCCCchHHHHHHHHHHHHHHHHHHHhhcccc---cccccchhh-HHHHHHHHHHH
Q 041987          157 LGSTLLAASSLSVCVWNIIQVGTIKQYPQVMKVVSFYSLAGTIQCSIFSLIMERNI---NAWKLKLNM-ELLLIIITAIF  232 (280)
Q Consensus       157 ~G~~~~l~aa~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~---~~~~~~~~~-~~~~~~~~g~~  232 (280)
                      .|..+.++++++|+...+..|. ..+.+ |.+..++.++++++.+.++.....+..   ..++..... .+......|++
T Consensus         2 ~g~~~~i~a~~~wg~~~~~~k~-~~~~~-~~~i~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~   79 (256)
T TIGR00688         2 KGIIVSLLASFLFGYMYYYSKL-LKPLP-ATDILGHRMIWSFPFMLLSVTLFRQWAALIERLKRIQKRPLILSLLLCGLL   79 (256)
T ss_pred             CcHHHHHHHHHHHHHHHHHHHH-hccCC-HHHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHhCcccchHHHHHHHHHHH
Confidence            4888999999999999999997 45676 999999999999888766554332100   011111111 23344556654


Q ss_pred             HHHHHHHHHHhhhhccCcceeccccchHHHHHHHHHHHHhcCccccC
Q 041987          233 GSVIRSTVHVSCAEMKGHLYVPMFKPFGIVFATAFGLTFFTNSLHYG  279 (280)
Q Consensus       233 ~t~~~~~~~~~a~~~~~~~~~s~~~~l~pv~a~~l~~~~l~E~it~~  279 (280)
                       ....+.++++++++.++..++...++.|+++.++++++++|+++..
T Consensus        80 -~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~  125 (256)
T TIGR00688        80 -IGFNWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVFLKERISRF  125 (256)
T ss_pred             -HHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCHH
Confidence             5688999999999999999999999999999999999999999864

This uncharacterized protein is predicted to have many membrane-spanning domains.

>PRK11689 aromatic amino acid exporter; Provisional

Probab=98.43  E-value=5.2e-06  Score=73.16  Aligned_cols=116  Identities=13%  Similarity=0.161  Sum_probs=87.5

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHhhhcccCCCCCCCCCHHHHHHHHHHHHHHH
Q 041987           12 MVPFTLMVIMEGCTIGLTIVTKTAMNGGMSPFVFIAYTNALGSILLLPYSFFFHHRGSEAQPLFTLPLMLRFFFLGLTGV   91 (280)
Q Consensus        12 ~~~~l~~~~~~~~wg~~~~~~k~~~~~~~~p~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~g~   91 (280)
                      ..+.++++.++++|+...+..|...++ .+|....   +..+.+.+.+..... +.. .  ...+...+......|+ ..
T Consensus       155 ~~G~~~~l~aa~~~A~~~v~~k~~~~~-~~~~~~~---~~~~~~~l~~~~~~~-~~~-~--~~~~~~~~~~l~~~~~-~t  225 (295)
T PRK11689        155 PLSYGLAFIGAFIWAAYCNVTRKYARG-KNGITLF---FILTALALWIKYFLS-PQP-A--MVFSLPAIIKLLLAAA-AM  225 (295)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHhhccCC-CCchhHH---HHHHHHHHHHHHHHh-cCc-c--ccCCHHHHHHHHHHHH-HH
Confidence            458899999999999999999997654 7877653   233444444433332 211 1  2245566766766664 44


Q ss_pred             HHHHHHHHHHhhccchhHHHHhhhhhHHHHHHHHHHhhccccCCc
Q 041987           92 AISQNLAFFGLYYSSPIVVCVMGLLIPAISFLLSIITRKAASDDK  136 (280)
Q Consensus        92 ~~~~~~~~~~l~~~~~~~a~vi~~~~P~~~~il~~i~~~ek~~~~  136 (280)
                      .+.+.++++++++++++.++.+.++.|++..++++++++|+++..
T Consensus       226 ~~~~~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~~~lgE~~~~~  270 (295)
T PRK11689        226 GFGYAAWNVGILHGNMTLLATASYFTPVLSAALAALLLSTPLSFS  270 (295)
T ss_pred             HHHHHHHHHHHHccCHHHHHHHHHhHHHHHHHHHHHHhCCCCcHH
Confidence            678999999999999999999999999999999999999999665

>KOG1443 consensus Predicted integral membrane protein [Function unknown]

Probab=98.41  E-value=4.9e-05  Score=65.45  Aligned_cols=248  Identities=13%  Similarity=0.061  Sum_probs=153.1

Q ss_pred             HHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHhhhcccCCCCCCCCCHHHHH-HHHHHHHHHHHHHHHHHHHHhhccc
Q 041987           28 LTIVTKTAMNGGMSPFVFIAYTNALGSILLLPYSFFFHHRGSEAQPLFTLPLML-RFFFLGLTGVAISQNLAFFGLYYSS  106 (280)
Q Consensus        28 ~~~~~k~~~~~~~~p~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~gl~g~~~~~~~~~~~l~~~~  106 (280)
                      .+...+.-.+. -=|...+.....+-.+.-.......+++..+.+...+|++.+ +++..|+.+ +++-.+.+++++|++
T Consensus        32 tf~~~~~~~~f-~fPLf~ts~h~~v~flfa~~~~~l~~~~~~r~r~~~sw~~~Lr~~aPtalat-a~DIGLSN~sl~yVt  109 (349)
T KOG1443|consen   32 TFYFKWLTKNF-HFPLFVTSLHLAVKFLFAALSRRLYQCSVPRARVVLSWRDYLRRLAPTALAT-ALDIGLSNWSLEYVT  109 (349)
T ss_pred             HHHhhhhhcCc-CCchHHHHHHHHHHHHHHHHHHHHHhccCCccccCCcHHHHHHHhhhhhhhh-hcccccccceeeeee
Confidence            44444443333 457777777776655544443332201111101345666655 555566655 588889999999999


Q ss_pred             hhHHHHhhhhhHHHHHHHHHHhhccccCCc-ce--eeeCCC-CCCCCCCCchhHHHHHHHHHHHHH----HHHHHHHHHh
Q 041987          107 PIVVCVMGLLIPAISFLLSIITRKAASDDK-LE--AKINPP-LLIFYSTPDRWVLGSTLLAASSLS----VCVWNIIQVG  178 (280)
Q Consensus       107 ~~~a~vi~~~~P~~~~il~~i~~~ek~~~~-g~--~ii~~~-~~~~~~~~~~~~~G~~~~l~aa~~----~a~~~v~~~~  178 (280)
                      .+.-+..=++.++|+.+.+.++.-||.++. ..  .+|..+ ..-...+.+.+..|..+.+.|.++    |+.-..+.|+
T Consensus       110 lSlYTM~KSSsi~FIllFs~if~lEk~~w~L~l~v~lI~~Glflft~KsTqf~i~Gf~lv~~aS~~sGlRW~~tQ~ll~~  189 (349)
T KOG1443|consen  110 LSLYTMTKSSSILFILLFSLIFKLEKFRWALVLIVLLIAVGLFLFTYKSTQFNIEGFFLVLAASLLSGLRWAFTQMLLRN  189 (349)
T ss_pred             eeeeeeccccHHHHHHHHHHHHHhHHHHHHHHHHHHHHhhheeEEEecccceeehhHHHHHHHHHhhhhhHHHHHHHHhc
Confidence            999888889999999999999999999998 21  111111 000122344556787777766655    5555444444


Q ss_pred             hhhcCCCchHHHHHHHHHHHHHHHHHHHhhccccc-----ccccchhh-HHHHHHHHHHHHHHHHHHH---HHhhhhccC
Q 041987          179 TIKQYPQVMKVVSFYSLAGTIQCSIFSLIMERNIN-----AWKLKLNM-ELLLIIITAIFGSVIRSTV---HVSCAEMKG  249 (280)
Q Consensus       179 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~-----~~~~~~~~-~~~~~~~~g~~~t~~~~~~---~~~a~~~~~  249 (280)
                      -.-..++|........-...+.++|..+.+|++..     .+...+.. .+..+...+. +...++.+   =+...++.+
T Consensus       190 ~~~~~~~P~~ti~~l~p~M~~~Ll~~~l~fEG~~~~~~s~~f~~~d~~~~~rv~g~i~l-~g~laF~l~~sEflLl~~Ts  268 (349)
T KOG1443|consen  190 QPSAKRNPIDTIFHLQPWMSIGLLPLSLLFEGLHLITSSSIFRFQDTGLILRVIGLISL-GGLLAFLLEFSEFLLLSRTS  268 (349)
T ss_pred             CccccCCCeeeHHHhhhHHHHHHHHHHHHHcccccchhhhHHHhcCccHHHHHHHHHHH-HHHHHHHHHHHHHheeeecc
Confidence            32122357777777777777888888888877421     12222221 1222223322 33333333   234568888


Q ss_pred             cceeccccchHHHHHHHHHHHHhcCcccc
Q 041987          250 HLYVPMFKPFGIVFATAFGLTFFTNSLHY  278 (280)
Q Consensus       250 ~~~~s~~~~l~pv~a~~l~~~~l~E~it~  278 (280)
                      .-..|+..-.--+...++|.++.+|.++.
T Consensus       269 ~ltlSIaGI~Kel~tl~la~ii~~d~ls~  297 (349)
T KOG1443|consen  269 SLTLSIAGIVKEVCTLLLAIIILKDQLSL  297 (349)
T ss_pred             ceeeeHHHHHHHHHHHHHHHHHhhcchhh
Confidence            88899999999999999999999999874

>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins

Probab=98.41  E-value=3e-06  Score=66.96  Aligned_cols=121  Identities=13%  Similarity=0.139  Sum_probs=94.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhhhc------CCCchHHHHHHHHHHHHHHHHHHHhhccccc-c--cccc------hhhH
Q 041987          158 GSTLLAASSLSVCVWNIIQVGTIKQ------YPQVMKVVSFYSLAGTIQCSIFSLIMERNIN-A--WKLK------LNME  222 (280)
Q Consensus       158 G~~~~l~aa~~~a~~~v~~~~~~~~------~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~-~--~~~~------~~~~  222 (280)
                      |.++++.+.++.|++.++.|+..++      ..++..+..+....+.+.+.+...+.|.+.. .  ....      ....
T Consensus         1 G~~~~l~s~~~~al~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~   80 (153)
T PF03151_consen    1 GFILALASSLFSALRNVLIKKLLKKVSSNSKKLNPLNLLYYNSPISFIILLPLAFLLEGPQLSSFFSEIFGEELSSDPNF   80 (153)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHhhhhhhcchHHH
Confidence            6789999999999999999887665      2357888999999999999999887765321 1  0010      1233


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhhhccCcceeccccchHHHHHHHHHHHHhcCccccC
Q 041987          223 LLLIIITAIFGSVIRSTVHVSCAEMKGHLYVPMFKPFGIVFATAFGLTFFTNSLHYG  279 (280)
Q Consensus       223 ~~~~~~~g~~~t~~~~~~~~~a~~~~~~~~~s~~~~l~pv~a~~l~~~~l~E~it~~  279 (280)
                      +..++..|+ ....-....+..+++.+|...++....-.+...+++++++||++|..
T Consensus        81 ~~~~~~~~~-~~~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~  136 (153)
T PF03151_consen   81 IFLLILSGL-LAFLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPL  136 (153)
T ss_pred             HHHHHHHHH-HHHHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHH
Confidence            555555666 44566777888999999999999999999999999999999999864

O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.

>PLN00411 nodulin MtN21 family protein; Provisional

Probab=98.31  E-value=1.8e-05  Score=71.44  Aligned_cols=120  Identities=10%  Similarity=0.082  Sum_probs=86.9

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHhCCCCh-HHHHHHHHHHHHHHHHHHHhhhcccCCCC--CCCCCHHHHHHHHHHHHH
Q 041987           13 VPFTLMVIMEGCTIGLTIVTKTAMNGGMSP-FVFIAYTNALGSILLLPYSFFFHHRGSEA--QPLFTLPLMLRFFFLGLT   89 (280)
Q Consensus        13 ~~~l~~~~~~~~wg~~~~~~k~~~~~~~~p-~~~~~~R~~~a~l~l~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~gl~   89 (280)
                      .+.+.++.++++|+...+..|...+. .+| ....++...++++.+.+..... .+....  ....+.. ..-....++.
T Consensus       189 lG~~l~l~aa~~wa~~~il~~~~~~~-~~~~~~~t~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~-~~~i~y~~i~  265 (358)
T PLN00411        189 IGGALLTIQGIFVSVSFILQAHIMSE-YPAAFTVSFLYTVCVSIVTSMIGLVV-EKNNPSVWIIHFDIT-LITIVTMAII  265 (358)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHH-cCcHhHHHHHHHHHHHHHHHHHHHHH-ccCCcccceeccchH-HHHHHHHHHH
Confidence            37789999999999999999988765 544 4666677777766665555543 332110  0112222 2223334444


Q ss_pred             HHHHHHHHHHHHhhccchhHHHHhhhhhHHHHHHHHHHhhccccCCc
Q 041987           90 GVAISQNLAFFGLYYSSPIVVCVMGLLIPAISFLLSIITRKAASDDK  136 (280)
Q Consensus        90 g~~~~~~~~~~~l~~~~~~~a~vi~~~~P~~~~il~~i~~~ek~~~~  136 (280)
                      . .+.+.++++++++.+++.++...++.|++++++++++++|+++..
T Consensus       266 t-~lay~lw~~~v~~~ga~~as~~~~L~PV~a~llg~l~LgE~lt~~  311 (358)
T PLN00411        266 T-SVYYVIHSWTVRHKGPLYLAIFKPLSILIAVVMGAIFLNDSLYLG  311 (358)
T ss_pred             H-HHHHHHHHHHHhccCchHHHHHHhHHHHHHHHHHHHHhCCCCcHH
Confidence            3 467889999999999999999999999999999999999999765

>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long

Probab=98.27  E-value=6.9e-05  Score=64.39  Aligned_cols=189  Identities=13%  Similarity=0.025  Sum_probs=123.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHhhh-hhHHHHHHHHHHhhccccCCc----ce---eee------C
Q 041987           77 LPLMLRFFFLGLTGVAISQNLAFFGLYYSSPIVVCVMGL-LIPAISFLLSIITRKAASDDK----LE---AKI------N  142 (280)
Q Consensus        77 ~~~~~~~~~~gl~g~~~~~~~~~~~l~~~~~~~a~vi~~-~~P~~~~il~~i~~~ek~~~~----g~---~ii------~  142 (280)
                      .+.+....+.|++= .+.|...+.|.++...+.+--+-. .+=+-+.+++.++++|--+.+    |.   .++      .
T Consensus        42 ~~~~~~~~lsG~~W-~iGq~~qf~s~~~~GVS~tmPiStg~QLvg~sl~gv~~fgEW~~~~~~~~G~~Al~liiiGv~lt  120 (269)
T PF06800_consen   42 GTSFIVAFLSGAFW-AIGQIGQFKSFKKIGVSKTMPISTGLQLVGTSLIGVLFFGEWTTTTQKIIGFLALVLIIIGVILT  120 (269)
T ss_pred             HHHHHHHHHHHHHH-HHHHHHHHHHHHHhcceeeeccchhHHHHHHHHHHHhhcCCCCCcchHHHHHHHHHHHHHHHHHh
Confidence            36677777777665 488999999999999998877764 445568889999999988766    33   111      1


Q ss_pred             -CCCCCCC--CCCchhHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCchHHHHHHHHHHHHHHHHHH-Hhhcccccccccc
Q 041987          143 -PPLLIFY--STPDRWVLGSTLLAASSLSVCVWNIIQVGTIKQYPQVMKVVSFYSLAGTIQCSIFS-LIMERNINAWKLK  218 (280)
Q Consensus       143 -~~~~~~~--~~~~~~~~G~~~~l~aa~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~~~~  218 (280)
                       ..+.+..  ++..+...|....+++.+.|..|.+..|.  .+.+ +.....-| .+|-++...+. .+.+.+.  ++- 
T Consensus       121 s~~~~~~~~~~~~~~~~kgi~~Ll~stigy~~Y~~~~~~--~~~~-~~~~~lPq-aiGm~i~a~i~~~~~~~~~--~~k-  193 (269)
T PF06800_consen  121 SYQDKKSDKSSSKSNMKKGILALLISTIGYWIYSVIPKA--FHVS-GWSAFLPQ-AIGMLIGAFIFNLFSKKPF--FEK-  193 (269)
T ss_pred             ccccccccccccccchhhHHHHHHHHHHHHHHHHHHHHh--cCCC-hhHhHHHH-HHHHHHHHHHHhhcccccc--ccc-
Confidence             1111111  12345578999999999999999998765  3343 54443322 23333322222 2112211  111 


Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHhhhhccCcceeccccchHHHHHHHHHHHHhcCccc
Q 041987          219 LNMELLLIIITAIFGSVIRSTVHVSCAEMKGHLYVPMFKPFGIVFATAFGLTFFTNSLH  277 (280)
Q Consensus       219 ~~~~~~~~~~~g~~~t~~~~~~~~~a~~~~~~~~~s~~~~l~pv~a~~l~~~~l~E~it  277 (280)
                        ..+..+ ..|+ .=.++..++..+.++.|.+..=.+.-+.++++.+.+.+++||+=+
T Consensus       194 --~~~~ni-l~G~-~w~ignl~~~is~~~~G~a~af~lSQ~~vvIStlgGI~il~E~Kt  248 (269)
T PF06800_consen  194 --KSWKNI-LTGL-IWGIGNLFYLISAQKNGVATAFTLSQLGVVISTLGGIFILKEKKT  248 (269)
T ss_pred             --chHHhh-HHHH-HHHHHHHHHHHhHHhccchhhhhHHhHHHHHHHhhhheEEEecCc
Confidence              112222 2333 223566778889999999999999999999999999999999743

Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane

>PRK11453 O-acetylserine/cysteine export protein; Provisional

Probab=98.23  E-value=5.1e-05  Score=66.94  Aligned_cols=124  Identities=13%  Similarity=0.165  Sum_probs=89.9

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHhCCCCh--HHHHHHHHHHHHHHHHHHHhhhcccCCC---CCCCCCHHHHHHHHHH
Q 041987           12 MVPFTLMVIMEGCTIGLTIVTKTAMNGGMSP--FVFIAYTNALGSILLLPYSFFFHHRGSE---AQPLFTLPLMLRFFFL   86 (280)
Q Consensus        12 ~~~~l~~~~~~~~wg~~~~~~k~~~~~~~~p--~~~~~~R~~~a~l~l~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~   86 (280)
                      ..+.++.+.+.++|+...+..|...+..-+|  .....+-..++.+.+....... +....   .....+...+..+...
T Consensus       142 ~~G~~l~l~aal~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~l  220 (299)
T PRK11453        142 MLGFMLTLAAAFSWACGNIFNKKIMSHSTRPAVMSLVVWSALIPIIPFFVASLIL-DGSATMIHSLVTIDMTTILSLMYL  220 (299)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhcccCccchhHHHHHHHHHHHHHHHHHHHHh-cCchhhhhhhccCCHHHHHHHHHH
Confidence            4699999999999999999999875432122  2333334444444333332222 22110   0013456678888889


Q ss_pred             HHHHHHHHHHHHHHHhhccchhHHHHhhhhhHHHHHHHHHHhhccccCCc
Q 041987           87 GLTGVAISQNLAFFGLYYSSPIVVCVMGLLIPAISFLLSIITRKAASDDK  136 (280)
Q Consensus        87 gl~g~~~~~~~~~~~l~~~~~~~a~vi~~~~P~~~~il~~i~~~ek~~~~  136 (280)
                      |+++..+.+.+++.++++.+++.++.+..+.|++..++++++++|+++..
T Consensus       221 ~i~~t~~~~~l~~~~l~~~~a~~~s~~~~l~Pv~a~~~~~l~lgE~~~~~  270 (299)
T PRK11453        221 AFVATIVGYGIWGTLLGRYETWRVAPLSLLVPVVGLASAALLLDERLTGL  270 (299)
T ss_pred             HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhCCCccHH
Confidence            99998889999999999999999999999999999999999999998544

>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]

Probab=98.18  E-value=3.5e-05  Score=65.37  Aligned_cols=234  Identities=11%  Similarity=0.064  Sum_probs=153.7

Q ss_pred             ChHHHHHHHHHHHHHHHHHHHhhhcccC-CCC-CCC--CCHHHHHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHhhhh
Q 041987           41 SPFVFIAYTNALGSILLLPYSFFFHHRG-SEA-QPL--FTLPLMLRFFFLGLTGVAISQNLAFFGLYYSSPIVVCVMGLL  116 (280)
Q Consensus        41 ~p~~~~~~R~~~a~l~l~~~~~~~~~~~-~~~-~~~--~~~~~~~~~~~~gl~g~~~~~~~~~~~l~~~~~~~a~vi~~~  116 (280)
                      .|....++..++...+.+.+.... .+- ..+ .++  .+.+.-+.+.-+..+-. +.-.+..+.++|.+++.--+==.+
T Consensus        60 ~plf~t~~qcLvt~~~c~~ls~ls-~k~~~~ftfp~~~ldl~t~r~vlplsvVfi-~mI~fnnlcL~yVgVaFYyvgRsL  137 (347)
T KOG1442|consen   60 APLFITWYQCLVTTSICLVLSSLS-VKYPGLFTFPSLQLDLATARQVLPLSVVFI-LMISFNNLCLKYVGVAFYYVGRSL  137 (347)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHH-hhccceeccCcccccHHHHHhhcchhheee-eehhccceehhhcceEEEEeccch
Confidence            588889999998888887776544 221 110 122  33333333333333322 333445677777776643333346


Q ss_pred             hHHHHHHHHHHhhccccCCc---ce--eeeCCCCCCCCC--CCchhHHHHHHHHHHHHHHHHHHHHHHhhhhcCC-CchH
Q 041987          117 IPAISFLLSIITRKAASDDK---LE--AKINPPLLIFYS--TPDRWVLGSTLLAASSLSVCVWNIIQVGTIKQYP-QVMK  188 (280)
Q Consensus       117 ~P~~~~il~~i~~~ek~~~~---g~--~ii~~~~~~~~~--~~~~~~~G~~~~l~aa~~~a~~~v~~~~~~~~~~-~~~~  188 (280)
                      .-.|+.++.+.++|+|-+..   +.  .+++...+.+++  .+.....|.++...|.++-|+..+..||.....+ +-+.
T Consensus       138 ttvFtVlLtyvllkqkTs~~~~~~C~lIi~GF~lGvdqE~~~~~ls~~GvifGVlaSl~vAlnaiytkk~l~~v~~~iw~  217 (347)
T KOG1442|consen  138 TTVFTVLLTYVLLKQKTSFFALGCCLLIILGFGLGVDQEGSTGTLSWIGVIFGVLASLAVALNAIYTKKVLPPVGDCIWR  217 (347)
T ss_pred             hhhHHHHhHHhhcccccccccceeehhheehheeccccccccCccchhhhHHHHHHHHHHHHHHHhhheecccccCeehh
Confidence            67889999999999999888   22  233333332233  3455578999999999999999999998776644 3467


Q ss_pred             HHHHHHHHHHHHHHHHHHhhcccc--cccccc-hhhHHHHHHHHHHHHHHHHHHHHHhhhhccCcceeccccchHHHHHH
Q 041987          189 VVSFYSLAGTIQCSIFSLIMERNI--NAWKLK-LNMELLLIIITAIFGSVIRSTVHVSCAEMKGHLYVPMFKPFGIVFAT  265 (280)
Q Consensus       189 ~~~~~~~~~~i~~~~~~~~~~~~~--~~~~~~-~~~~~~~~~~~g~~~t~~~~~~~~~a~~~~~~~~~s~~~~l~pv~a~  265 (280)
                      .+.+....+.++.+|...+.+.-.  ..++.. ...-|..+...|+++-.++|. -.+-+|-.+|..=.+....--..=.
T Consensus       218 lt~ynnv~a~lLflpll~lnge~~~v~~~~~l~a~~Fw~~mtLsglfgF~mgyv-Tg~QIK~TSplThnISgTAka~aQT  296 (347)
T KOG1442|consen  218 LTAYNNVNALLLFLPLLILNGEFQAVVGFPHLPAIKFWILMTLSGLFGFAMGYV-TGWQIKVTSPLTHNISGTAKAAAQT  296 (347)
T ss_pred             hHHHHHHHHHHHHHHHHHHcchHHHHcCcccchHHHHHHHHHHHHHHHHHhhhe-eeEEEEecccceeeecHhHHHHHHH
Confidence            888899999999888877654311  122222 233477777788877666643 3456677777777777777778888


Q ss_pred             HHHHHHhcCccc
Q 041987          266 AFGLTFFTNSLH  277 (280)
Q Consensus       266 ~l~~~~l~E~it  277 (280)
                      ++++.+++|.-+
T Consensus       297 vlAv~~y~E~ks  308 (347)
T KOG1442|consen  297 VLAVAYYSETKS  308 (347)
T ss_pred             HHHHHHHHHHhh
Confidence            899999999765

>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=98.18  E-value=2.7e-05  Score=64.67  Aligned_cols=186  Identities=14%  Similarity=0.041  Sum_probs=136.3

Q ss_pred             HHHHHHHHHHHHHhhccchhHHHHhhhhhHHHHHHHHHHhhccccCCc----------ceeeeCCCCCC-CCCCCchhHH
Q 041987           89 TGVAISQNLAFFGLYYSSPIVVCVMGLLIPAISFLLSIITRKAASDDK----------LEAKINPPLLI-FYSTPDRWVL  157 (280)
Q Consensus        89 ~g~~~~~~~~~~~l~~~~~~~a~vi~~~~P~~~~il~~i~~~ek~~~~----------g~~ii~~~~~~-~~~~~~~~~~  157 (280)
                      ....+.+...+.+++|.+=-...+=-+.-|+-+++++.++.+++-+++          |+++....... ....++....
T Consensus        93 ~sYLlAMVssN~Alq~vpYPTqVlgKScKPIPVMilGVl~~~KsY~w~kY~cVL~IV~GValFmYK~~Kv~g~e~~t~g~  172 (337)
T KOG1580|consen   93 ASYLLAMVSSNQALQYVPYPTQVLGKSCKPIPVMILGVLFAHKSYHWRKYCCVLMIVVGVALFMYKENKVGGAEDKTFGF  172 (337)
T ss_pred             HHHHHHHHhccchhcccCCcHHHhcccCCCcceeeeehhhhcccccHHHHHHHHHHHHHHHHhhccccccCCCcccccch
Confidence            334466777889999988766555556779999999999999999988          22222211111 1123455678


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhhhcCC-CchHHHHHHHHHHHHHHHHHHHhhcccccccccc-----hhhHHHHHHHHHH
Q 041987          158 GSTLLAASSLSVCVWNIIQVGTIKQYP-QVMKVVSFYSLAGTIQCSIFSLIMERNINAWKLK-----LNMELLLIIITAI  231 (280)
Q Consensus       158 G~~~~l~aa~~~a~~~v~~~~~~~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~g~  231 (280)
                      |.++.+++-.-=+.-...+.++.+.+. ..-.++.+..+++.+.+..-.++.+.   .|.+.     -+..|.-+...++
T Consensus       173 GElLL~lSL~mDGlTg~~Qdrira~yq~~g~~MM~~~NlwStL~Lg~g~lfTGE---lweF~yF~~RhP~~~~~l~l~ai  249 (337)
T KOG1580|consen  173 GELLLILSLAMDGLTGSIQDRIRASYQRTGTSMMFYTNLWSTLYLGAGLLFTGE---LWEFFYFVQRHPYVFWDLTLLAI  249 (337)
T ss_pred             HHHHHHHHHHhcccchhHHHHHHHhhccCchhhHHHHHHHHHHHhhhhheehhh---HHHHHHHHHhccHHHHHHHHHHH
Confidence            999999988777777778888776553 24578888889998887666555443   12211     1223555566666


Q ss_pred             HHHHHHHHHHHhhhhccCcceeccccchHHHHHHHHHHHHhcCcccc
Q 041987          232 FGSVIRSTVHVSCAEMKGHLYVPMFKPFGIVFATAFGLTFFTNSLHY  278 (280)
Q Consensus       232 ~~t~~~~~~~~~a~~~~~~~~~s~~~~l~pv~a~~l~~~~l~E~it~  278 (280)
                       ++++++++.++-+.+-||-.-|+.....-.++++.++++++++++.
T Consensus       250 -~s~LGQ~fIF~tv~~FgPLtCSivTTTRKfFTil~SVllf~npls~  295 (337)
T KOG1580|consen  250 -ASCLGQWFIFKTVEEFGPLTCSIVTTTRKFFTILISVLLFNNPLSG  295 (337)
T ss_pred             -HHHhhhHHHHHHHHHhCCeeEEEEeehHHHHHHHHHHHHhcCcCcH
Confidence             7889999999999999999999999999999999999999999874

>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator

Probab=98.17  E-value=1.3e-05  Score=70.83  Aligned_cols=141  Identities=18%  Similarity=0.170  Sum_probs=99.6

Q ss_pred             chhhHHHHHHHHHHHHHHHHHHHHHHHhC-CCChHHHHHHHHHHHHHHHHHHHhhhcccCCCCCCC--------CCHHHH
Q 041987           10 EEMVPFTLMVIMEGCTIGLTIVTKTAMNG-GMSPFVFIAYTNALGSILLLPYSFFFHHRGSEAQPL--------FTLPLM   80 (280)
Q Consensus        10 ~~~~~~l~~~~~~~~wg~~~~~~k~~~~~-~~~p~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~--------~~~~~~   80 (280)
                      .+..|.++.++++++|+...+..|...++ +.||..+..+-...+.+.+.|+.... +..... +.        .+....
T Consensus       142 ~~~~G~~~~l~a~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~-~~~~~~-~~~~~~~~~~~~~~~~  219 (302)
T TIGR00817       142 FNWAGFLSAMISNITFVSRNIFSKKAMTIKSLDKTNLYAYISIMSLFLLSPPAFIT-EGPPFL-PHGFMQAISGVNVTKI  219 (302)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCcccHHHHHHHHHHHHHHHHHHHH-cchHHH-HHHHHHhhcccCchHH
Confidence            34569999999999999999999998761 38999999999999999999987654 321100 00        010111


Q ss_pred             HH-HHHHHHHHHHHHHHHHHHHhhccchhHHHHhhhhhHHHHHHHHHHhhccccCCcceeeeCCCCCCCCCCCchhHHHH
Q 041987           81 LR-FFFLGLTGVAISQNLAFFGLYYSSPIVVCVMGLLIPAISFLLSIITRKAASDDKLEAKINPPLLIFYSTPDRWVLGS  159 (280)
Q Consensus        81 ~~-~~~~gl~g~~~~~~~~~~~l~~~~~~~a~vi~~~~P~~~~il~~i~~~ek~~~~g~~ii~~~~~~~~~~~~~~~~G~  159 (280)
                      .. ....+.......+.+++.+++++++..+++.....|++++++++++++|+++..                  ...|.
T Consensus       220 ~~~~~~~~~~~~~~~~~~~~~~l~~~sa~t~sv~~~l~pv~~~~~~~~~lge~lt~~------------------~~~G~  281 (302)
T TIGR00817       220 YTVSLVAAMGFFHFYQQVAFMLLGRVSPLTHSVGNCMKRVVVIVVSILFFGTKISPQ------------------QVFGT  281 (302)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHccCCchHHHHHhhhhhhheeeeehhhcCCCCchh------------------HHHHH
Confidence            11 222222222233457778999999999999999999999999999999998543                  34566


Q ss_pred             HHHHHHHHHHH
Q 041987          160 TLLAASSLSVC  170 (280)
Q Consensus       160 ~~~l~aa~~~a  170 (280)
                      .+.+.+...+.
T Consensus       282 ~lil~Gv~l~~  292 (302)
T TIGR00817       282 GIAIAGVFLYS  292 (302)
T ss_pred             HHHHHHHHHHH
Confidence            66666665444

specificities overlap.

>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins

Probab=98.06  E-value=0.00023  Score=56.02  Aligned_cols=121  Identities=17%  Similarity=0.286  Sum_probs=98.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhC------CCChHHHHHHHHHHHHHHHHHHHhhhcccCCCCC----CC-----CCHH
Q 041987           14 PFTLMVIMEGCTIGLTIVTKTAMNG------GMSPFVFIAYTNALGSILLLPYSFFFHHRGSEAQ----PL-----FTLP   78 (280)
Q Consensus        14 ~~l~~~~~~~~wg~~~~~~k~~~~~------~~~p~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~----~~-----~~~~   78 (280)
                      |....+.+.++-+.-.+..|..+++      +.+|.++..+-...+.+++++..... ++.+..+    .+     .+.+
T Consensus         1 G~~~~l~s~~~~al~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~l~~~~~~~-e~~~~~~~~~~~~~~~~~~~~~   79 (153)
T PF03151_consen    1 GFILALASSLFSALRNVLIKKLLKKVSSNSKKLNPLNLLYYNSPISFIILLPLAFLL-EGPQLSSFFSEIFGEELSSDPN   79 (153)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHHHHH-hhhhhhhHHHHhhhhhhcchHH
Confidence            4567889999999999999998866      69999999999999999999988876 4432100    00     0234


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHhhhhhHHHHHHHHHHhhccccCCc
Q 041987           79 LMLRFFFLGLTGVAISQNLAFFGLYYSSPIVVCVMGLLIPAISFLLSIITRKAASDDK  136 (280)
Q Consensus        79 ~~~~~~~~gl~g~~~~~~~~~~~l~~~~~~~a~vi~~~~P~~~~il~~i~~~ek~~~~  136 (280)
                      .+..+...|+++. ..+...+.-++++++...++....-.+.+.+++.++++|+++..
T Consensus        80 ~~~~~~~~~~~~~-~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~  136 (153)
T PF03151_consen   80 FIFLLILSGLLAF-LYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPL  136 (153)
T ss_pred             HHHHHHHHHHHHH-HHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHH
Confidence            4566666777765 78889999999999999999999999999999999999998655

O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.

>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional

Probab=97.97  E-value=0.00065  Score=61.37  Aligned_cols=126  Identities=15%  Similarity=0.145  Sum_probs=88.1

Q ss_pred             chhhHHHHHHHHHHHHHHHHHHHHHHHhC------CCChHHHHHHHHHHHHHHHHHHHhhhcccCCC---------CCCC
Q 041987           10 EEMVPFTLMVIMEGCTIGLTIVTKTAMNG------GMSPFVFIAYTNALGSILLLPYSFFFHHRGSE---------AQPL   74 (280)
Q Consensus        10 ~~~~~~l~~~~~~~~wg~~~~~~k~~~~~------~~~p~~~~~~R~~~a~l~l~~~~~~~~~~~~~---------~~~~   74 (280)
                      .+..|.++.++++++|+.-.+..|..+++      ..++.....+-...++++++|+.... +....         ....
T Consensus       191 ~~~~G~~~~l~s~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lp~~~~~-e~~~~~~~~~~~~~~~~~  269 (350)
T PTZ00343        191 FTWLAFWCAMLSNLGSSLRSIFAKKTMKNKSEIGENLTASNIYMLLTLIASLISLPLVLFF-EGKKWVPVWTNYTANMTN  269 (350)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccCCHHHHHHHHHHHHHHHHHHHHHHH-hhHHHHHHHHHhhhcccc
Confidence            34679999999999999999999998864      25677777777889999999887643 22100         0001


Q ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHhhhhhHHHHHHHHHHhhccccCCc
Q 041987           75 FTLPLMLRFFFLGLTGVAISQNLAFFGLYYSSPIVVCVMGLLIPAISFLLSIITRKAASDDK  136 (280)
Q Consensus        75 ~~~~~~~~~~~~gl~g~~~~~~~~~~~l~~~~~~~a~vi~~~~P~~~~il~~i~~~ek~~~~  136 (280)
                      ..+.......+.+.+...+.+.+.|++++++++...++....-|+++.++++++++|+++..
T Consensus       270 ~~~~~~l~~i~~s~l~~~l~n~~~f~~l~~~s~~t~sv~~~lk~V~~iv~s~l~~ge~lt~~  331 (350)
T PTZ00343        270 YTKGIIIFKIFFSGVWYYLYNEVAFYCLGKVNQVTHAVANTLKRVVIIVSSIIIFQTQVTLL  331 (350)
T ss_pred             cchHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHhhhhHHHhCCCCchH
Confidence            11111222222222223344445567999999999999999999999999999999998654

>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]

Probab=97.94  E-value=0.00034  Score=60.62  Aligned_cols=117  Identities=17%  Similarity=0.216  Sum_probs=91.1

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHH-HHHHHHHHHHHHHHhhhcccCCCCCCCCCHHHHHHHHHHHHHH
Q 041987           12 MVPFTLMVIMEGCTIGLTIVTKTAMNGGMSPFVFIA-YTNALGSILLLPYSFFFHHRGSEAQPLFTLPLMLRFFFLGLTG   90 (280)
Q Consensus        12 ~~~~l~~~~~~~~wg~~~~~~k~~~~~~~~p~~~~~-~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~g   90 (280)
                      ..+.+..+.+.++|+...+..|... + .++..... +.+..+.....+....  .++    ...+.+.+......|+++
T Consensus       153 ~~g~~~~l~a~~~~a~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~--~~~----~~~~~~~~~~~~~~g~~~  224 (292)
T COG0697         153 LLGLLLALAAALLWALYTALVKRLS-R-LGPVTLALLLQLLLALLLLLLFFLS--GFG----APILSRAWLLLLYLGVFS  224 (292)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhc-C-CChHHHHHHHHHHHHHHHHHHHHhc--ccc----ccCCHHHHHHHHHHHHHH
Confidence            5799999999999999999999776 3 67777776 4444333333333221  111    134566788888889888


Q ss_pred             HHHHHHHHHHHhhccchhHHHHhhhhhHHHHHHHHHHhhccccCCc
Q 041987           91 VAISQNLAFFGLYYSSPIVVCVMGLLIPAISFLLSIITRKAASDDK  136 (280)
Q Consensus        91 ~~~~~~~~~~~l~~~~~~~a~vi~~~~P~~~~il~~i~~~ek~~~~  136 (280)
                      ....+.+++++++..+++..+.+..+.|++..++++++++|+++..
T Consensus       225 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~l~~~e~~~~~  270 (292)
T COG0697         225 TGLAYLLWYYALRLLGASLVALLSLLEPVFAALLGVLLLGEPLSPA  270 (292)
T ss_pred             HHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhCCCCcHH
Confidence            7678999999999999999999999999999999999999999766

>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional

Probab=97.80  E-value=0.00015  Score=55.68  Aligned_cols=102  Identities=10%  Similarity=0.072  Sum_probs=74.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhhhcCCCchHHHHHHHHHHHHHHHHHHHhhcccccccccchhhHHHHHHHHHHHHHHH
Q 041987          157 LGSTLLAASSLSVCVWNIIQVGTIKQYPQVMKVVSFYSLAGTIQCSIFSLIMERNINAWKLKLNMELLLIIITAIFGSVI  236 (280)
Q Consensus       157 ~G~~~~l~aa~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~t~~  236 (280)
                      .|.++.+.+.++-+...++-|+-.++.+ +.+.... .    .. ..... .     +        -...+++|+++.++
T Consensus         2 ~~~~~i~~sv~l~~~gQl~~K~g~~~~g-~~~~~~~-~----~~-~~~~~-~-----~--------p~~~i~lgl~~~~l   60 (129)
T PRK02971          2 MGYLWGLASVLLASVAQLSLKWGMSRLP-LLSHAWD-F----IA-ALLAF-G-----L--------ALRAVLLGLAGYAL   60 (129)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHHHhhCC-CccchhH-H----HH-HHHHH-h-----c--------cHHHHHHHHHHHHH
Confidence            3667889999999999999998887765 3222111 0    10 00000 0     0        01136788999999


Q ss_pred             HHHHHHhhhhccCcceeccccchHHHHHHHHHHH--HhcCccccC
Q 041987          237 RSTVHVSCAEMKGHLYVPMFKPFGIVFATAFGLT--FFTNSLHYG  279 (280)
Q Consensus       237 ~~~~~~~a~~~~~~~~~s~~~~l~pv~a~~l~~~--~l~E~it~~  279 (280)
                      +|.+|.+++++.|.+.+.++....++...+.++.  ++||++|+.
T Consensus        61 a~~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls~~  105 (129)
T PRK02971         61 SMLCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFSLK  105 (129)
T ss_pred             HHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHH
Confidence            9999999999999999999999999888888885  899999975

>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein

Probab=97.75  E-value=0.00054  Score=60.21  Aligned_cols=112  Identities=17%  Similarity=0.108  Sum_probs=86.7

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHH----HHHHHHHHHHhhhcccCCCCCCCCCHHHHHHHHHHH
Q 041987           12 MVPFTLMVIMEGCTIGLTIVTKTAMNGGMSPFVFIAYTNA----LGSILLLPYSFFFHHRGSEAQPLFTLPLMLRFFFLG   87 (280)
Q Consensus        12 ~~~~l~~~~~~~~wg~~~~~~k~~~~~~~~p~~~~~~R~~----~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g   87 (280)
                      +|++.+.+++.+.++...+..|..  + .||.+..+....    .+.+++.++  .+ +   +  +.. .+..+...+.|
T Consensus       151 ~~Gi~~~l~sg~~y~~~~~~~~~~--~-~~~~~~~~~~~~g~~~~~~~~~~~~--~~-~---~--~~~-~~~~~~~~~~G  218 (290)
T TIGR00776       151 KKGILLLLMSTIGYLVYVVVAKAF--G-VDGLSVLLPQAIGMVIGGIIFNLGH--IL-A---K--PLK-KYAILLNILPG  218 (290)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHc--C-CCcceehhHHHHHHHHHHHHHHHHH--hc-c---c--chH-HHHHHHHHHHH
Confidence            789999999999999999999975  3 789988655554    444433333  11 1   2  222 33344455588


Q ss_pred             HHHHHHHHHHHHHHhh-ccchhHHHHhhhhhHHHHHHHHHHhhccccCCc
Q 041987           88 LTGVAISQNLAFFGLY-YSSPIVVCVMGLLIPAISFLLSIITRKAASDDK  136 (280)
Q Consensus        88 l~g~~~~~~~~~~~l~-~~~~~~a~vi~~~~P~~~~il~~i~~~ek~~~~  136 (280)
                      ++- .+.+.+++.|.+ +.+++.++.+.+..|+...+.+.+++||+.+++
T Consensus       219 i~~-~ia~~~y~~~~~~~~~~~~~~~ls~~~pvia~~~~v~~l~E~~~~~  267 (290)
T TIGR00776       219 LMW-GIGNFFYLFSAQPKVGVATSFSLSQLGVIISTLGGILILGEKKTKR  267 (290)
T ss_pred             HHH-HHHHHHHHHHcccccchhhHHHHHHHHHHHHHHHHHHHhccCCCcc
Confidence            875 578889999999 999999999999999999999999999999877

These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.

>PRK13499 rhamnose-proton symporter; Provisional

Probab=97.70  E-value=0.015  Score=52.01  Aligned_cols=258  Identities=9%  Similarity=0.015  Sum_probs=143.7

Q ss_pred             chhhHHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHH-HHHHHHHH-HHhhhccc---CCCCCCCCCHHHHHHHH
Q 041987           10 EEMVPFTLMVIMEGCTIGLTIVTKTAMNGGMSPFVFIAYTNA-LGSILLLP-YSFFFHHR---GSEAQPLFTLPLMLRFF   84 (280)
Q Consensus        10 ~~~~~~l~~~~~~~~wg~~~~~~k~~~~~~~~p~~~~~~R~~-~a~l~l~~-~~~~~~~~---~~~~~~~~~~~~~~~~~   84 (280)
                      +-..+++..++++++||+.++..|. .+.  -++|.-+.-.. ++.+++-. ...+. .|   ...  ...+.+.+....
T Consensus         4 ~~~~G~~~~~i~~~~~GS~~~p~K~-~k~--w~wE~~W~v~gi~~wl~~~~~~g~~~-~~~f~~~~--~~~~~~~~~~~~   77 (345)
T PRK13499          4 AIILGIIWHLIGGASSGSFYAPFKK-VKK--WSWETMWSVGGIFSWLILPWLIAALL-LPDFWAYY--SSFSGSTLLPVF   77 (345)
T ss_pred             hhHHHHHHHHHHHHHhhcccccccc-cCC--CchhHHHHHHHHHHHHHHHHHHHHHH-hhhHHHHH--HhcCHHHHHHHH
Confidence            3456899999999999999999998 333  23333322111 11111110 01111 11   111  224556666666


Q ss_pred             HHHHHHHHHHHHHHHHHhhccchhHHHHhh-hhhHHHHHHHHHHhhcccc---CCc-------ceeee-------CC---
Q 041987           85 FLGLTGVAISQNLAFFGLYYSSPIVVCVMG-LLIPAISFLLSIITRKAAS---DDK-------LEAKI-------NP---  143 (280)
Q Consensus        85 ~~gl~g~~~~~~~~~~~l~~~~~~~a~vi~-~~~P~~~~il~~i~~~ek~---~~~-------g~~ii-------~~---  143 (280)
                      +.|.+= .+.+..++.++++...+.+--+. .++-+...++..++++|=.   +..       |++++       ..   
T Consensus        78 l~G~~W-~iG~i~~~~s~~~iGvS~~~pIs~Gl~lv~gtL~~~i~~gew~~~~~t~~g~~~~~gv~liliGi~l~s~Ag~  156 (345)
T PRK13499         78 LFGALW-GIGGITYGLTMRYLGMSLGIGIAIGITLIVGTLMPPIINGNFDVLLATNGGRMTLLGVLVALIGVAIVGRAGQ  156 (345)
T ss_pred             HHHHHH-HhhhhhHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHccccccccccchHHHHHHHHHHHHHHHHHHHHhhh
Confidence            677665 47899999999999999887776 4777888888888888654   333       22111       11   


Q ss_pred             -CCCCC-C--CCCchhHHHHHHHHHHHHHHHHHH-------HHHHhhhh-cCCCchHHHHH---HHHHHHHHHHHHHHh-
Q 041987          144 -PLLIF-Y--STPDRWVLGSTLLAASSLSVCVWN-------IIQVGTIK-QYPQVMKVVSF---YSLAGTIQCSIFSLI-  207 (280)
Q Consensus       144 -~~~~~-~--~~~~~~~~G~~~~l~aa~~~a~~~-------v~~~~~~~-~~~~~~~~~~~---~~~~~~i~~~~~~~~-  207 (280)
                       .+.+. +  +++.+...|...++++.+.++.|.       ...+...+ +.+ +.....-   .++.|++..-.+... 
T Consensus       157 ~k~~~~~~~~~~~~~~~KGi~ialisgi~~~~f~~~~~~~~~~~~~a~~~g~~-~~~~~lp~~~~~~~G~~~~n~~~~~~  235 (345)
T PRK13499        157 LKERKMGIKKAEEFNLKKGLILAVMSGIFSACFSFAMDAGKPMHEAAAALGVD-PLYAALPSYVVIMGGGAITNLGFCFI  235 (345)
T ss_pred             hcccccccccccccchHhHHHHHHHHHHHHHHHHHHHhhccchhhhhhhcCCC-chHHHHHHHHHHHHHHHHHHHHHHHH
Confidence             11110 1  223466899999999999999999       44433211 222 3322222   233555544432211 


Q ss_pred             ---hcccc---cccccch---hhHHHHHHHHHHHHHHHHHHHHHhhhhccCcceecc---cc-chHHHHHHHHHHHHhcC
Q 041987          208 ---MERNI---NAWKLKL---NMELLLIIITAIFGSVIRSTVHVSCAEMKGHLYVPM---FK-PFGIVFATAFGLTFFTN  274 (280)
Q Consensus       208 ---~~~~~---~~~~~~~---~~~~~~~~~~g~~~t~~~~~~~~~a~~~~~~~~~s~---~~-~l~pv~a~~l~~~~l~E  274 (280)
                         .+++.   .+...+.   .++...-+..|+ .=.+++.+|..+-++.|......   +. -+..+++.+.+. +++|
T Consensus       236 ~~~k~~~~~~~~~~~~~~~~~~~n~l~~~l~G~-~W~~~~~~y~~~~~~~g~~~~~~sw~l~m~~~ViistlwGi-~lkE  313 (345)
T PRK13499        236 RLAKNKDLSLKADFSLAKPLLITNVLLSALAGV-MWYLQFFFYAMGHSKLGAQYDFVSWMLHMSFYVLCGNLWGL-VLKE  313 (345)
T ss_pred             HHhhCCCcccchhccccchhHHHHHHHHHHHHH-HHHHHHHHHHHHHHHcCCccchHHHHHhccHHHHHHHHhhh-hhhh
Confidence               11111   1111100   112221122333 23456778888888887665544   44 666799999998 5999


Q ss_pred             ccc
Q 041987          275 SLH  277 (280)
Q Consensus       275 ~it  277 (280)
                      .=+
T Consensus       314 ~K~  316 (345)
T PRK13499        314 WKG  316 (345)
T ss_pred             ccC
Confidence            633

>PF13536 EmrE: Multidrug resistance efflux transporter

Probab=97.69  E-value=0.00012  Score=54.91  Aligned_cols=87  Identities=16%  Similarity=0.194  Sum_probs=59.8

Q ss_pred             HHHHHHHHHHHHHHHhhcccccccccchhhHHHHHHHHHHHHHHHHHHHHHhhhhccCcceeccccchHHHHHHHHHHHH
Q 041987          192 FYSLAGTIQCSIFSLIMERNINAWKLKLNMELLLIIITAIFGSVIRSTVHVSCAEMKGHLYVPMFKPFGIVFATAFGLTF  271 (280)
Q Consensus       192 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~t~~~~~~~~~a~~~~~~~~~s~~~~l~pv~a~~l~~~~  271 (280)
                      +.+.++.+....+.....+....+.....+.+...+..|+++...++.+|.++.++.++ .+++...+.|+++.++++++
T Consensus         3 ~r~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~~-~v~~i~~~~pi~~~ll~~~~   81 (113)
T PF13536_consen    3 FRYLFSVLFLLIILLIRGRLRDLFRALRRKPWLWLILAGLLGFGVAYLLFFYALSYAPA-LVAAIFSLSPIFTALLSWLF   81 (113)
T ss_pred             HHHHHHHHHHHHHHHHHccHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHhCcH-HHHHHHHHHHHHHHHHHHHH
Confidence            44555555555554442211001111112335555666776777899999999999995 88899999999999999999


Q ss_pred             hcCccccC
Q 041987          272 FTNSLHYG  279 (280)
Q Consensus       272 l~E~it~~  279 (280)
                      ++|+++..
T Consensus        82 ~~er~~~~   89 (113)
T PF13536_consen   82 FKERLSPR   89 (113)
T ss_pred             hcCCCCHH
Confidence            99999853

>KOG3912 consensus Predicted integral membrane protein [General function prediction only]

Probab=97.53  E-value=0.0028  Score=54.27  Aligned_cols=175  Identities=17%  Similarity=0.158  Sum_probs=116.6

Q ss_pred             HHHHHHHHHHHh---CCCC----hHHHHHHHHHHHHHHHHHHHhhhccc----CCCC---------CCCCCHHHHHHHHH
Q 041987           26 IGLTIVTKTAMN---GGMS----PFVFIAYTNALGSILLLPYSFFFHHR----GSEA---------QPLFTLPLMLRFFF   85 (280)
Q Consensus        26 g~~~~~~k~~~~---~~~~----p~~~~~~R~~~a~l~l~~~~~~~~~~----~~~~---------~~~~~~~~~~~~~~   85 (280)
                      ..+.+++|++-+   +|.|    |+.-...-|+.=++.+..+...+ .|    +...         +++.+...+..   
T Consensus        16 s~Ntl~aKwadsi~~eg~pgfqhpvlqal~mFlGEflCl~vf~lir-~~sn~~g~~s~~~~ilsq~~~pf~p~lfl~---   91 (372)
T KOG3912|consen   16 SFNTLVAKWADSIQAEGSPGFQHPVLQALLMFLGEFLCLAVFKLIR-LRSNGQGVSSDLDSILSQDSSPFNPVLFLP---   91 (372)
T ss_pred             cHHHHHHHHHHhhhhhCCCccccHHHHHHHHHHHHHHHHHHHHHHH-HhhcCCCcccccccccccccCCCCcceecC---
Confidence            467888998842   2233    66666666666666666665554 33    1110         01222222222   


Q ss_pred             HHHHHHHHHHHHHHHHhhccchhHHHHhhhhhHHHHHHHHHHhhccccCCc---c-------eeeeCCC--CC--CCCCC
Q 041987           86 LGLTGVAISQNLAFFGLYYSSPIVVCVMGLLIPAISFLLSIITRKAASDDK---L-------EAKINPP--LL--IFYST  151 (280)
Q Consensus        86 ~gl~g~~~~~~~~~~~l~~~~~~~a~vi~~~~P~~~~il~~i~~~ek~~~~---g-------~~ii~~~--~~--~~~~~  151 (280)
                      -+++.. ....+.|.|+.+|+++.-..+=...-+|+.+++.-+++++++.+   |       +++++..  ..  +..+.
T Consensus        92 Pal~Di-~gsslm~vgL~lTsASsfQMlRGaviIFvglfst~~Ln~ti~~~qWl~i~fv~lGlviVg~~d~~~~~~p~~d  170 (372)
T KOG3912|consen   92 PALCDI-AGSSLMYVGLNLTSASSFQMLRGAVIIFVGLFSTMFLNRTITGRQWLGILFVSLGLVIVGSLDVHLVTDPYTD  170 (372)
T ss_pred             hHHHHH-hhhHHHHHHHHHhhHHHHHHhhcchhhhhHHHHHHHHhcccchhhHHHHHHHHhhhheeeeeecccccCCccc
Confidence            445554 56678899999999999998888999999999999999999866   3       3333322  11  12233


Q ss_pred             CchhHHHHHHHHHHHHHHHHHHHHHHhhhhcCC-CchHHHHHHHHHHHHHHHHHH
Q 041987          152 PDRWVLGSTLLAASSLSVCVWNIIQVGTIKQYP-QVMKVVSFYSLAGTIQCSIFS  205 (280)
Q Consensus       152 ~~~~~~G~~~~l~aa~~~a~~~v~~~~~~~~~~-~~~~~~~~~~~~~~i~~~~~~  205 (280)
                      .++...|+++.+.|=+.-|.-.+.-+|..++.+ +|.....|.-++|.+++....
T Consensus       171 ~s~iitGdllIiiaqiivaiQ~v~Eek~l~~~nV~pl~avg~eGlfG~v~~slL~  225 (372)
T KOG3912|consen  171 YSSIITGDLLIIIAQIIVAIQMVCEEKQLKKSNVAPLQAVGWEGLFGLVILSLLA  225 (372)
T ss_pred             cccchhhhHHHHHHHHHHHHHHHHHHhhhhhccCCHHHHhhhhhhHHHHHHHHHH
Confidence            456689999999999999999998777666532 488888998888855554433

>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]

Probab=97.45  E-value=0.00047  Score=56.96  Aligned_cols=185  Identities=12%  Similarity=0.058  Sum_probs=133.3

Q ss_pred             HHHHHHHHhhccchhHHHHhhhhhHHHHHHHHHHhhccccCCc-----ceeeeCCC---CCCCC---CCCchhHHHHHHH
Q 041987           94 SQNLAFFGLYYSSPIVVCVMGLLIPAISFLLSIITRKAASDDK-----LEAKINPP---LLIFY---STPDRWVLGSTLL  162 (280)
Q Consensus        94 ~~~~~~~~l~~~~~~~a~vi~~~~P~~~~il~~i~~~ek~~~~-----g~~ii~~~---~~~~~---~~~~~~~~G~~~~  162 (280)
                      .-+.--.+++|.+...-++.-++.-+.++.....+++.|.+..     ++-++...   -++.+   ......+.|-+|+
T Consensus        81 MIyt~SKsLqyL~vpiYTiFKNltII~iAygEvl~Fgg~vtsl~l~SFilMvlSS~va~w~D~q~~~~~~~~lN~GY~Wm  160 (309)
T COG5070          81 MIYTSSKSLQYLAVPIYTIFKNLTIILIAYGEVLFFGGRVTSLELLSFILMVLSSVVATWGDQQASAFKAQILNPGYLWM  160 (309)
T ss_pred             HHHhcccceeeeeeeHHHHhccceeehhHhhHHHHhcCccchhhHHHHHHHHHHHHHhccchhhHHHHHhcccCCceEEE
Confidence            3344567899999999999989999999999999999999877     22111110   00001   1122345788999


Q ss_pred             HHHHHHHHHHHHHHHhhhhcCC-CchHHHHHHHHHHHHHHHHHHHhhcc-ccccccc-chhhHHHHHHHHHHHHHHHHHH
Q 041987          163 AASSLSVCVWNIIQVGTIKQYP-QVMKVVSFYSLAGTIQCSIFSLIMER-NINAWKL-KLNMELLLIIITAIFGSVIRST  239 (280)
Q Consensus       163 l~aa~~~a~~~v~~~~~~~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~g~~~t~~~~~  239 (280)
                      ...++.-+.+....|+..+-.. .-...++|..+.+..+++.+.++.|+ ++.+... .+...+.+++..|+.+.+++ +
T Consensus       161 ~~NclssaafVL~mrkri~ltNf~d~dtmfYnNllslPiL~~~s~~~edws~~n~annl~~d~l~am~ISgl~svgiS-y  239 (309)
T COG5070         161 FTNCLSSAAFVLIMRKRIKLTNFKDFDTMFYNNLLSLPILLSFSFLFEDWSPGNLANNLSVDSLMAMFISGLCSVGIS-Y  239 (309)
T ss_pred             ehhhHhHHHHHHHHHHhhcccccchhhHHHHhhhHHHHHHHHHHHHhccCCcchhhcCCChHHHHHHHHHHHHHhhhh-h
Confidence            9999999999988887655311 24578889998888888888877765 2211111 12234667788888665555 5


Q ss_pred             HHHhhhhccCcceeccccchHHHHHHHHHHHHhcCccccC
Q 041987          240 VHVSCAEMKGHLYVPMFKPFGIVFATAFGLTFFTNSLHYG  279 (280)
Q Consensus       240 ~~~~a~~~~~~~~~s~~~~l~pv~a~~l~~~~l~E~it~~  279 (280)
                      +-.|.+|-.+++.-|....+.-.-..+-|.+++||+.+.+
T Consensus       240 ~saWcvrVtSSTtySMvGALNKlp~alaGlvffdap~nf~  279 (309)
T COG5070         240 CSAWCVRVTSSTTYSMVGALNKLPIALAGLVFFDAPVNFL  279 (309)
T ss_pred             ccceeEeehhhhHHHHHHHhhhChHHHhhhhhcCCchhHH
Confidence            6789999999999999999999999999999999998764

>COG2962 RarD Predicted permeases [General function prediction only]

Probab=97.42  E-value=0.0012  Score=56.75  Aligned_cols=123  Identities=11%  Similarity=0.028  Sum_probs=94.6

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCchHHHHHHHHHHHHHHHHHHHhhcccccccc-cchhhHHHHHHHHHHH
Q 041987          154 RWVLGSTLLAASSLSVCVWNIIQVGTIKQYPQVMKVVSFYSLAGTIQCSIFSLIMERNINAWK-LKLNMELLLIIITAIF  232 (280)
Q Consensus       154 ~~~~G~~~~l~aa~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~g~~  232 (280)
                      +...|.++.+.|-+-|+..-.+.|- .++.+ +.++..+..+++...++...........-++ ..+++.+......+..
T Consensus         4 ~~~~Gil~~l~Ay~lwG~lp~y~kl-l~~~~-~~eIlahRviwS~~~~l~ll~~~r~~~~~~~~~~~p~~~~~~~l~a~l   81 (293)
T COG2962           4 DSRKGILLALLAYLLWGLLPLYFKL-LEPLP-ATEILAHRVIWSFPFMLALLFLLRQWRELKQLLKQPKTLLMLALTALL   81 (293)
T ss_pred             cccchhHHHHHHHHHHHHHHHHHHH-HccCC-HHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhCcHHHHHHHHHHHH
Confidence            3457999999999999998888775 46666 8899999999998888776655432111111 2233445665656553


Q ss_pred             HHHHHHHHHHhhhhccCcceeccccchHHHHHHHHHHHHhcCccccC
Q 041987          233 GSVIRSTVHVSCAEMKGHLYVPMFKPFGIVFATAFGLTFFTNSLHYG  279 (280)
Q Consensus       233 ~t~~~~~~~~~a~~~~~~~~~s~~~~l~pv~a~~l~~~~l~E~it~~  279 (280)
                      - ..-.+.|.|+.......++|.=.++.|.+.+++|.++++|+++-.
T Consensus        82 i-~~nW~lfiWAvn~g~~leaSLGY~InPL~~VllG~lflkErls~~  127 (293)
T COG2962          82 I-GLNWWLFIWAVNNGHVLEASLGYFINPLVNVLLGRLFLKERLSRL  127 (293)
T ss_pred             H-HHHHHHhheecCCCchhHHHhHHHHHHHHHHHHHHHHHHhhccHH
Confidence            3 488999999999999999999999999999999999999998753

>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional

Probab=97.35  E-value=0.0006  Score=51.02  Aligned_cols=51  Identities=6%  Similarity=-0.036  Sum_probs=46.4

Q ss_pred             HHHHHHHHHHHHHHhhhhccCcceeccccchHHHHHHHHHHHHhcCccccC
Q 041987          229 TAIFGSVIRSTVHVSCAEMKGHLYVPMFKPFGIVFATAFGLTFFTNSLHYG  279 (280)
Q Consensus       229 ~g~~~t~~~~~~~~~a~~~~~~~~~s~~~~l~pv~a~~l~~~~l~E~it~~  279 (280)
                      .++++.+.++.++.+++|+.+.+++.....+.|+++.++|++++||++|+.
T Consensus        42 ~~~~~~~l~~~~~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~ls~~   92 (111)
T PRK15051         42 LALACLGLAMVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSPR   92 (111)
T ss_pred             HHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCCCCHH
Confidence            344677789999999999999999999999999999999999999999874

>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional

Probab=97.30  E-value=0.0012  Score=49.43  Aligned_cols=54  Identities=13%  Similarity=0.010  Sum_probs=48.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHhhccchhHHHHhhhhhHHHHHHHHHHhhccccCCc
Q 041987           83 FFFLGLTGVAISQNLAFFGLYYSSPIVVCVMGLLIPAISFLLSIITRKAASDDK  136 (280)
Q Consensus        83 ~~~~gl~g~~~~~~~~~~~l~~~~~~~a~vi~~~~P~~~~il~~i~~~ek~~~~  136 (280)
                      ....++++......++..+++..|.+.+..+.++.|+++.+++++++|||++.+
T Consensus        39 ~~~~~~~~~~l~~~~~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~ls~~   92 (111)
T PRK15051         39 WLGLALACLGLAMVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSPR   92 (111)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCCCCHH
Confidence            334455666788999999999999999999999999999999999999999987

>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]

Probab=97.25  E-value=0.005  Score=50.05  Aligned_cols=87  Identities=14%  Similarity=0.020  Sum_probs=72.0

Q ss_pred             HHHHHHHHHhhccchhHHHHhhhhhHHHHHHHHHHhhccccCCc----------ceeeeCCCCCCCCCCCchhHHHHHHH
Q 041987           93 ISQNLAFFGLYYSSPIVVCVMGLLIPAISFLLSIITRKAASDDK----------LEAKINPPLLIFYSTPDRWVLGSTLL  162 (280)
Q Consensus        93 ~~~~~~~~~l~~~~~~~a~vi~~~~P~~~~il~~i~~~ek~~~~----------g~~ii~~~~~~~~~~~~~~~~G~~~~  162 (280)
                      ..++.|..+++..++++++.+...+..|+.+++++.+++|....          |+.++...    .+.......|+.++
T Consensus        65 ~aNY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~~~~~kIlaailAI~GiVmiay~----DN~~a~e~iGi~~A  140 (290)
T KOG4314|consen   65 GANYLYLLALKKISASDASAIFACNAAFVFILAIIVLGDRFMGFKILAAILAIGGIVMIAYA----DNEHADEIIGIACA  140 (290)
T ss_pred             cCCcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHHhccchhhhhHHHHHHHhCcEEEEEec----cchhhhhhhhHHHH
Confidence            46789999999999999999999999999999999999998755          33333322    23345567899999


Q ss_pred             HHHHHHHHHHHHHHHhhhhcC
Q 041987          163 AASSLSVCVWNIIQVGTIKQY  183 (280)
Q Consensus       163 l~aa~~~a~~~v~~~~~~~~~  183 (280)
                      ..++..-|.|-|+-|+...+.
T Consensus       141 V~SA~~aAlYKV~FK~~iGnA  161 (290)
T KOG4314|consen  141 VGSAFMAALYKVLFKMFIGNA  161 (290)
T ss_pred             HHHHHHHHHHHHHHHHHhccC
Confidence            999999999999999887753

>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function

Probab=97.09  E-value=0.012  Score=52.55  Aligned_cols=125  Identities=10%  Similarity=-0.025  Sum_probs=93.1

Q ss_pred             cchhhHHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHhhhcccCCCCCCCCCHHHHHHHHHHHH
Q 041987            9 EEEMVPFTLMVIMEGCTIGLTIVTKTAMNGGMSPFVFIAYTNALGSILLLPYSFFFHHRGSEAQPLFTLPLMLRFFFLGL   88 (280)
Q Consensus         9 ~~~~~~~l~~~~~~~~wg~~~~~~k~~~~~~~~p~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl   88 (280)
                      .+..+|.+.++.++.++|...+.-|...++ .|+.+....=-+.+.++..+..... +|+.....+.+.+....+...++
T Consensus       164 ~~~i~GDll~l~~a~lya~~nV~~E~~v~~-~~~~~~lg~~Glfg~ii~~iq~~il-e~~~i~~~~w~~~~~~~~v~~~~  241 (334)
T PF06027_consen  164 SNPILGDLLALLGAILYAVSNVLEEKLVKK-APRVEFLGMLGLFGFIISGIQLAIL-ERSGIESIHWTSQVIGLLVGYAL  241 (334)
T ss_pred             CccchhHHHHHHHHHHHHHHHHHHHHhccc-CCHHHHHHHHHHHHHHHHHHHHHhe-ehhhhhccCCChhhHHHHHHHHH
Confidence            456889999999999999999999999987 8998888777788888887776665 66443112234444433333332


Q ss_pred             HHHHHHHHHHHHHhhccchhHHHHhhhhhHHHHHHHHHHhhccccCCc
Q 041987           89 TGVAISQNLAFFGLYYSSPIVVCVMGLLIPAISFLLSIITRKAASDDK  136 (280)
Q Consensus        89 ~g~~~~~~~~~~~l~~~~~~~a~vi~~~~P~~~~il~~i~~~ek~~~~  136 (280)
                       ..+..+.+.-..++++++....+=.-+..++..+++.+++++++++.
T Consensus       242 -~lf~~y~l~p~~l~~ssAt~~nLsLLTsd~~ali~~i~~f~~~~~~l  288 (334)
T PF06027_consen  242 -CLFLFYSLVPIVLRMSSATFFNLSLLTSDFYALIIDIFFFGYKFSWL  288 (334)
T ss_pred             -HHHHHHHHHHHHHHhCccceeehHHHHhhHHHHHHHHHhcCccccHH
Confidence             23345556677888898887777667888999999999999999987

Some of the sequences in this family are annotated as putative membrane proteins.

>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function

Probab=97.06  E-value=0.072  Score=47.05  Aligned_cols=102  Identities=16%  Similarity=0.105  Sum_probs=70.1

Q ss_pred             chhhHHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHhhhcccCCCCCCCCCHHHHHHHHHHHHH
Q 041987           10 EEMVPFTLMVIMEGCTIGLTIVTKTAMNGGMSPFVFIAYTNALGSILLLPYSFFFHHRGSEAQPLFTLPLMLRFFFLGLT   89 (280)
Q Consensus        10 ~~~~~~l~~~~~~~~wg~~~~~~k~~~~~~~~p~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~   89 (280)
                      ++.-|....+.++++-+.....-|.+..+ .+.   .-               .  ++++.  ++...|+..|..  |++
T Consensus         4 ~~~iGv~lav~ss~~~~~g~~lqk~~~~r-~~~---~~---------------~--~~~~~--~~~~l~~~~W~~--G~~   58 (300)
T PF05653_consen    4 DFYIGVLLAVVSSIFIAVGFNLQKKSHLR-LPR---GS---------------L--RAGSG--GRSYLRRPLWWI--GLL   58 (300)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHHHH-hhc---cc---------------c--cccch--hhHHHhhHHHHH--HHH
Confidence            34568888888988988888888887543 110   00               0  00011  111122222333  333


Q ss_pred             HHHHHHHHHHHHhhccchhHHHHhhhhhHHHHHHHHHHhhccccCCc
Q 041987           90 GVAISQNLAFFGLYYSSPIVVCVMGLLIPAISFLLSIITRKAASDDK  136 (280)
Q Consensus        90 g~~~~~~~~~~~l~~~~~~~a~vi~~~~P~~~~il~~i~~~ek~~~~  136 (280)
                      ....+..+.+.|+.+.|++..+-+....-++.++++..++|||++++
T Consensus        59 ~~~~g~~~~~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~~~~  105 (300)
T PF05653_consen   59 LMVLGEILNFVALGFAPASLVAPLGALSLVFNAVLARFFLGEKLTRR  105 (300)
T ss_pred             HHhcchHHHHHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcccchHh
Confidence            34467788899999999999999999999999999999999999998

>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]

Probab=96.98  E-value=0.017  Score=48.94  Aligned_cols=120  Identities=16%  Similarity=0.117  Sum_probs=101.6

Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHhhhcccCCCCCCCCCHHHHHHHHHHHHHH
Q 041987           11 EMVPFTLMVIMEGCTIGLTIVTKTAMNGGMSPFVFIAYTNALGSILLLPYSFFFHHRGSEAQPLFTLPLMLRFFFLGLTG   90 (280)
Q Consensus        11 ~~~~~l~~~~~~~~wg~~~~~~k~~~~~~~~p~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~g   90 (280)
                      +..+..+.+.+..||+.--+..|.+-+. .+-..-+..-+.+++++.+|+..-.  ...   .-.++.........|+++
T Consensus       146 Dp~Gv~~Al~AG~~Wa~YIv~G~r~g~~-~~g~~g~a~gm~vAaviv~Pig~~~--ag~---~l~~p~ll~laLgvavlS  219 (292)
T COG5006         146 DPVGVALALGAGACWALYIVLGQRAGRA-EHGTAGVAVGMLVAALIVLPIGAAQ--AGP---ALFSPSLLPLALGVAVLS  219 (292)
T ss_pred             CHHHHHHHHHHhHHHHHHHHHcchhccc-CCCchHHHHHHHHHHHHHhhhhhhh--cch---hhcChHHHHHHHHHHHHh
Confidence            4568899999999999999999988654 5666777888999999999987643  221   234556667777888999


Q ss_pred             HHHHHHHHHHHhhccchhHHHHhhhhhHHHHHHHHHHhhccccCCc
Q 041987           91 VAISQNLAFFGLYYSSPIVVCVMGLLIPAISFLLSIITRKAASDDK  136 (280)
Q Consensus        91 ~~~~~~~~~~~l~~~~~~~a~vi~~~~P~~~~il~~i~~~ek~~~~  136 (280)
                      ..+.+.+...+++..+...-+++.++-|.+-++.++++++|+++..
T Consensus       220 SalPYsLEmiAL~rlp~~~F~~LlSLePa~aAl~G~i~L~e~ls~~  265 (292)
T COG5006         220 SALPYSLEMIALRRLPARTFGTLLSLEPALAALSGLIFLGETLTLI  265 (292)
T ss_pred             cccchHHHHHHHhhCChhHHHHHHHhhHHHHHHHHHHHhcCCCCHH
Confidence            9999999999999999999999999999999999999999999877

>TIGR00803 nst UDP-galactose transporter

Probab=96.93  E-value=0.0068  Score=50.99  Aligned_cols=122  Identities=10%  Similarity=0.056  Sum_probs=73.5

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCc-hHHHHHHHHHHHHHHHHHHHhhcccc-ccccc--chhhHHHHHHHH
Q 041987          154 RWVLGSTLLAASSLSVCVWNIIQVGTIKQYPQV-MKVVSFYSLAGTIQCSIFSLIMERNI-NAWKL--KLNMELLLIIIT  229 (280)
Q Consensus       154 ~~~~G~~~~l~aa~~~a~~~v~~~~~~~~~~~~-~~~~~~~~~~~~i~~~~~~~~~~~~~-~~~~~--~~~~~~~~~~~~  229 (280)
                      +...|....+.+..+-+...+++++..|+.+.. ........+.+.+.........+.+. .++..  ..+...+.+   
T Consensus        82 ~~~~g~~~~l~a~~~~~~~~~y~e~~~k~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---  158 (222)
T TIGR00803        82 NPVVGLSAVLSALLSSGFAGVYFEKILKDGDTMFWSRNLQLPLFGLFSTFSVLLWSDGTLISNFGFFIGYPTAVWIV---  158 (222)
T ss_pred             cHHHHHHHHHHHHHHHhhhHHHHHHcccCCCCchHHHHHHHHHHHHHHHHHHHhhcccchhhccCcccCCchHHHHH---
Confidence            445677777777777777778888776654311 12222223333332222111111110 11110  011111111   


Q ss_pred             HHHHHHHHHHHHHhhhhccCcceeccccchHHHHHHHHHHHHhcCccccC
Q 041987          230 AIFGSVIRSTVHVSCAEMKGHLYVPMFKPFGIVFATAFGLTFFTNSLHYG  279 (280)
Q Consensus       230 g~~~t~~~~~~~~~a~~~~~~~~~s~~~~l~pv~a~~l~~~~l~E~it~~  279 (280)
                       ++..+++..+..+.+|+.|+...+....++++++.+++++++||++|..
T Consensus       159 -~~~~a~~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~~  207 (222)
T TIGR00803       159 -GLLNVGGGLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISST  207 (222)
T ss_pred             -HHHHHhcCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccHH
Confidence             2345667788999999999999999999999999999999999999864

NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.

>KOG1582 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=96.73  E-value=0.0043  Score=52.89  Aligned_cols=243  Identities=12%  Similarity=0.067  Sum_probs=143.2

Q ss_pred             HHHHHHHHHHHh-CCCCh--HHHHHHHHHHHHHHHHHHHhhhcccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 041987           26 IGLTIVTKTAMN-GGMSP--FVFIAYTNALGSILLLPYSFFFHHRGSEAQPLFTLPLMLRFFFLGLTGVAISQNLAFFGL  102 (280)
Q Consensus        26 g~~~~~~k~~~~-~~~~p--~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~g~~~~~~~~~~~l  102 (280)
                      =....+-.+..+ .|+.|  |-+++..++.=+.+-+...... +.+ +  ...++|...   .++.+.. ..+.+-.-++
T Consensus        56 l~yGy~qElif~~~gfkp~GWylTlvQf~~Ysg~glie~~~~-~~k-~--r~iP~rtY~---~la~~t~-gtmGLsn~Sl  127 (367)
T KOG1582|consen   56 LVYGYLQELIFNVEGFKPFGWYLTLVQFLVYSGFGLIELQLI-QTK-R--RVIPWRTYV---ILAFLTV-GTMGLSNGSL  127 (367)
T ss_pred             HHHHHHHHHHhccccCcccchHHHHHHHHHHHhhhheEEEee-ccc-c--eecchhHhh---hhHhhhh-hccccCcCcc
Confidence            344444444431 12443  4455555544433333322222 222 2  345655543   3443332 3344445555


Q ss_pred             hccchhHHHHhhhh-hHHHHHHHHHHhhccccCCc--ce------eeeCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHH
Q 041987          103 YYSSPIVVCVMGLL-IPAISFLLSIITRKAASDDK--LE------AKINPPLLIFYSTPDRWVLGSTLLAASSLSVCVWN  173 (280)
Q Consensus       103 ~~~~~~~a~vi~~~-~P~~~~il~~i~~~ek~~~~--g~------~ii~~~~~~~~~~~~~~~~G~~~~l~aa~~~a~~~  173 (280)
                      .|.+=- +.++... --+-+.+.+.++-++|-..+  +.      .++.....+.+.+.+.+..|..+.-.|-++=|.--
T Consensus       128 gYLNYP-tQviFKccKliPVmiggifIqGkRY~v~d~~aA~lm~lGli~FTLADs~~sPNF~~~Gv~mIsgALl~DA~iG  206 (367)
T KOG1582|consen  128 GYLNYP-TQVIFKCCKLIPVMIGGIFIQGKRYGVHDYIAAMLMSLGLIWFTLADSQTSPNFNLIGVMMISGALLADAVIG  206 (367)
T ss_pred             ccccCc-HHHHHHhhhhhhhhheeeeeccccccHHHHHHHHHHHHHHHhhhhcccccCCCcceeeHHHHHHHHHHHHHhh
Confidence            555433 2444432 22223366677778887766  21      22333333345556677899999988888888888


Q ss_pred             HHHHhhhhcCC-CchHHHHHHHHHHHHHHHHHHHhhcccccccccc---hhhHHHHHHHHHHHHHHHHHHHHHhhhhccC
Q 041987          174 IIQVGTIKQYP-QVMKVVSFYSLAGTIQCSIFSLIMERNINAWKLK---LNMELLLIIITAIFGSVIRSTVHVSCAEMKG  249 (280)
Q Consensus       174 v~~~~~~~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~g~~~t~~~~~~~~~a~~~~~  249 (280)
                      -++.+..+..+ +..++.++.+.+|.+..+....+.+.-++.|..-   +.+...+.++.+. .+.++...---.++.-|
T Consensus       207 NvQEk~m~~~~~ss~EmvfySy~iG~vflf~~mvlTge~f~a~~fcaehp~~tyGy~~~~s~-~gylG~~~VLalI~~fG  285 (367)
T KOG1582|consen  207 NVQEKAMKMNPASSSEMVFYSYGIGFVFLFAPMVLTGELFSAWTFCAEHPVRTYGYAFLFSL-AGYLGIVFVLALIKLFG  285 (367)
T ss_pred             HHHHHHHhhCCCCcceEEEeeecccHHHHHHHHHhcccchhhhHHHHhCcHhHHHHHHHHHH-HhHhhHHHHHHHHHHhc
Confidence            88888877654 3467888888899988877776665533344321   2222334344433 45556566666778889


Q ss_pred             cceeccccchHHHHHHHHHHHHhcCcccc
Q 041987          250 HLYVPMFKPFGIVFATAFGLTFFTNSLHY  278 (280)
Q Consensus       250 ~~~~s~~~~l~pv~a~~l~~~~l~E~it~  278 (280)
                      +..++......--.+++++++++..++|.
T Consensus       286 A~~aatvTTaRKavTi~lSfllFsKPfT~  314 (367)
T KOG1582|consen  286 ALIAATVTTARKAVTILLSFLLFSKPFTE  314 (367)
T ss_pred             hhHHHHHHHhHhHHHHHHHHHHHcCchHH
Confidence            99999999999999999999999999875

>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional

Probab=96.49  E-value=0.03  Score=43.02  Aligned_cols=102  Identities=16%  Similarity=0.049  Sum_probs=71.8

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHhhhcccCCCCCCCCCHHHHHHHHHHHHHHHH
Q 041987           13 VPFTLMVIMEGCTIGLTIVTKTAMNGGMSPFVFIAYTNALGSILLLPYSFFFHHRGSEAQPLFTLPLMLRFFFLGLTGVA   92 (280)
Q Consensus        13 ~~~l~~~~~~~~wg~~~~~~k~~~~~~~~p~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~g~~   92 (280)
                      ++++.+++..++=+..-++.|..+++ .++.+.... . .      .....  ..       .+    ......|+....
T Consensus         2 ~~~~~i~~sv~l~~~gQl~~K~g~~~-~g~~~~~~~-~-~------~~~~~--~~-------~p----~~~i~lgl~~~~   59 (129)
T PRK02971          2 MGYLWGLASVLLASVAQLSLKWGMSR-LPLLSHAWD-F-I------AALLA--FG-------LA----LRAVLLGLAGYA   59 (129)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHHHhh-CCCccchhH-H-H------HHHHH--Hh-------cc----HHHHHHHHHHHH
Confidence            36677777777778888999999876 544332221 1 0      00000  00       11    113446777777


Q ss_pred             HHHHHHHHHhhccchhHHHHhhhhhHHHHHHHHHH--hhccccCCc
Q 041987           93 ISQNLAFFGLYYSSPIVVCVMGLLIPAISFLLSII--TRKAASDDK  136 (280)
Q Consensus        93 ~~~~~~~~~l~~~~~~~a~vi~~~~P~~~~il~~i--~~~ek~~~~  136 (280)
                      +.+.++.++++..+++.+.-+.+..+.++.+.++.  +++|+++.+
T Consensus        60 la~~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls~~  105 (129)
T PRK02971         60 LSMLCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFSLK  105 (129)
T ss_pred             HHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHH
Confidence            88999999999999999999999999888888874  899999887

>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long

Probab=96.34  E-value=0.081  Score=45.69  Aligned_cols=117  Identities=14%  Similarity=0.058  Sum_probs=82.6

Q ss_pred             cchhhHHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHhhhcccCCCCCCCCCHHHHHHHHHHHH
Q 041987            9 EEEMVPFTLMVIMEGCTIGLTIVTKTAMNGGMSPFVFIAYTNALGSILLLPYSFFFHHRGSEAQPLFTLPLMLRFFFLGL   88 (280)
Q Consensus         9 ~~~~~~~l~~~~~~~~wg~~~~~~k~~~~~~~~p~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl   88 (280)
                      .+..|++..++++.+.+..-.+..|..   ++||++..+=.. ++-++-..+.... .+ +.   ..+++ .++-.+.|+
T Consensus       134 ~~~~kgi~~Ll~stigy~~Y~~~~~~~---~~~~~~~~lPqa-iGm~i~a~i~~~~-~~-~~---~~~k~-~~~nil~G~  203 (269)
T PF06800_consen  134 SNMKKGILALLISTIGYWIYSVIPKAF---HVSGWSAFLPQA-IGMLIGAFIFNLF-SK-KP---FFEKK-SWKNILTGL  203 (269)
T ss_pred             cchhhHHHHHHHHHHHHHHHHHHHHhc---CCChhHhHHHHH-HHHHHHHHHHhhc-cc-cc---ccccc-hHHhhHHHH
Confidence            445779999999999998888888874   378887776443 3333322222221 21 11   12222 333445565


Q ss_pred             HHHHHHHHHHHHHhhccchhHHHHhhhhhHHHHHHHHHHhhccccCCc
Q 041987           89 TGVAISQNLAFFGLYYSSPIVVCVMGLLIPAISFLLSIITRKAASDDK  136 (280)
Q Consensus        89 ~g~~~~~~~~~~~l~~~~~~~a~vi~~~~P~~~~il~~i~~~ek~~~~  136 (280)
                      +-. ..+.+++.+.+....+.+-.+-++.+++..+.+.+++|||-++|
T Consensus       204 ~w~-ignl~~~is~~~~G~a~af~lSQ~~vvIStlgGI~il~E~Kt~k  250 (269)
T PF06800_consen  204 IWG-IGNLFYLISAQKNGVATAFTLSQLGVVISTLGGIFILKEKKTKK  250 (269)
T ss_pred             HHH-HHHHHHHHhHHhccchhhhhHHhHHHHHHHhhhheEEEecCchh
Confidence            543 77889999999999999999999999999999999999998776

Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane

>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]

Probab=96.06  E-value=0.0024  Score=54.35  Aligned_cols=118  Identities=14%  Similarity=0.115  Sum_probs=75.7

Q ss_pred             chhHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCchHHHHHHHHHHHHHHHHHHHhhcccccccccchhhHHHHHHHHHHH
Q 041987          153 DRWVLGSTLLAASSLSVCVWNIIQVGTIKQYPQVMKVVSFYSLAGTIQCSIFSLIMERNINAWKLKLNMELLLIIITAIF  232 (280)
Q Consensus       153 ~~~~~G~~~~l~aa~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~  232 (280)
                      +....|..+.-++ ..+....++.++..+.  +|.+......++--++..|..+..-.+  -+.....+.|+  +.=|+-
T Consensus        34 d~p~~gl~l~~vs-~ff~~~~vv~t~~~e~--~p~e~a~~r~l~~mlit~pcliy~~~~--v~gp~g~R~~L--iLRg~m  106 (346)
T KOG4510|consen   34 DKPNLGLLLLTVS-YFFNSCMVVSTKVLEN--DPMELASFRLLVRMLITYPCLIYYMQP--VIGPEGKRKWL--ILRGFM  106 (346)
T ss_pred             CCCccCceehhhH-HHHhhHHHhhhhhhcc--ChhHhhhhhhhhehhhhheEEEEEeee--eecCCCcEEEE--Eeehhh
Confidence            3557788888888 7777888888887665  366666555444444444433322111  11111112222  112222


Q ss_pred             HHHHHHHHHHhhhhccCcceeccccchHHHHHHHHHHHHhcCcccc
Q 041987          233 GSVIRSTVHVSCAEMKGHLYVPMFKPFGIVFATAFGLTFFTNSLHY  278 (280)
Q Consensus       233 ~t~~~~~~~~~a~~~~~~~~~s~~~~l~pv~a~~l~~~~l~E~it~  278 (280)
                      ++ .+....+++.++.+-+.+.++.+..|+++++++|.+|+|+.|.
T Consensus       107 G~-tgvmlmyya~~~mslaDA~vItFssPvft~ifaw~~LkE~~t~  151 (346)
T KOG4510|consen  107 GF-TGVMLMYYALMYMSLADAVVITFSSPVFTIIFAWAFLKEPFTK  151 (346)
T ss_pred             hh-hHHHHHHHHHhhcchhheEEEEecChHHHHHHHHHHHcCCCcH
Confidence            22 3446667799999999999999999999999999999999874

>KOG2922 consensus Uncharacterized conserved protein [Function unknown]

Probab=95.59  E-value=0.11  Score=45.69  Aligned_cols=105  Identities=12%  Similarity=0.109  Sum_probs=75.0

Q ss_pred             cccchhhHHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHhhhcccCCCCCCCCCHHHHHHHHHH
Q 041987            7 QMEEEMVPFTLMVIMEGCTIGLTIVTKTAMNGGMSPFVFIAYTNALGSILLLPYSFFFHHRGSEAQPLFTLPLMLRFFFL   86 (280)
Q Consensus         7 ~~~~~~~~~l~~~~~~~~wg~~~~~~k~~~~~~~~p~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (280)
                      ...++..+....+.+.++.|+++..-|..... .          ...       ...- +.+..  +.. +..+++   .
T Consensus        15 ~~~d~~~G~~LaissS~~Ig~sfilkKkgl~r-~----------~~~-------~~ra-~~gg~--~yl-~~~~Ww---~   69 (335)
T KOG2922|consen   15 MSSDNIIGLVLAISSSIFIGSSFILKKKGLKR-A----------GAS-------GLRA-GEGGY--GYL-KEPLWW---A   69 (335)
T ss_pred             hccCceeeeeehhhccEEEeeehhhhHHHHHH-H----------hhh-------cccc-cCCCc--chh-hhHHHH---H
Confidence            34566788888999999999999999987643 1          000       0000 11111  122 222333   3


Q ss_pred             HHHHHHHHHHHHHHHhhccchhHHHHhhhhhHHHHHHHHHHhhccccCCc
Q 041987           87 GLTGVAISQNLAFFGLYYSSPIVVCVMGLLIPAISFLLSIITRKAASDDK  136 (280)
Q Consensus        87 gl~g~~~~~~~~~~~l~~~~~~~a~vi~~~~P~~~~il~~i~~~ek~~~~  136 (280)
                      |.+....+....|.|..+-+++..+-+-++.-+..++++..++|||++.+
T Consensus        70 G~ltm~vGei~NFaAYaFAPasLVtPLGAlsvi~saila~~~L~Ekl~~~  119 (335)
T KOG2922|consen   70 GMLTMIVGEIANFAAYAFAPASLVTPLGALSVIISAILASFFLKEKLNLL  119 (335)
T ss_pred             HHHHHHHHhHhhHHHHhhchHhhhccchhHHHHHHHHHHHHHHHHHHHHh
Confidence            55555677888899999999999999999999999999999999999999

>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]

Probab=95.53  E-value=0.0034  Score=52.78  Aligned_cols=243  Identities=14%  Similarity=0.092  Sum_probs=149.6

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHhhhcccCCCCCCCCCHHHHHHHHHHHHHHHH
Q 041987           13 VPFTLMVIMEGCTIGLTIVTKTAMNGGMSPFVFIAYTNALGSILLLPYSFFFHHRGSEAQPLFTLPLMLRFFFLGLTGVA   92 (280)
Q Consensus        13 ~~~l~~~~~~~~wg~~~~~~k~~~~~~~~p~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~g~~   92 (280)
                      ..++..++-++.||+.+.....-   |=+|.+=..---+-|.++-+.+ ++. .+     |..+.+.+..-.+.|++= .
T Consensus         2 ~~~liaL~P~l~WGsip~v~~k~---GG~p~qQ~lGtT~GALifaiiv-~~~-~~-----p~~T~~~~iv~~isG~~W-s   70 (288)
T COG4975           2 MDLLIALLPALGWGSIPLVANKF---GGKPYQQTLGTTLGALIFAIIV-FLF-VS-----PELTLTIFIVGFISGAFW-S   70 (288)
T ss_pred             hhHHHHHHHHHHhcccceeeeec---CCChhHhhhhccHHHHHHHHHH-hee-ec-----CccchhhHHHHHHhhhHh-h
Confidence            35678889999999998776543   3466665544444444433333 322 22     456666665555555543 4


Q ss_pred             HHHHHHHHHhhccchhHHHHhhh-hhHHHHHHHHHHhhccccCCc----ce-e--ee--CC-----CCC--CCCCCCchh
Q 041987           93 ISQNLAFFGLYYSSPIVVCVMGL-LIPAISFLLSIITRKAASDDK----LE-A--KI--NP-----PLL--IFYSTPDRW  155 (280)
Q Consensus        93 ~~~~~~~~~l~~~~~~~a~vi~~-~~P~~~~il~~i~~~ek~~~~----g~-~--ii--~~-----~~~--~~~~~~~~~  155 (280)
                      +.|...+.|.++.+++.+--+-. .+-+-+.+++.+.++|=.+..    |. |  ++  +.     .+.  ...++.++.
T Consensus        71 ~GQ~~Qfka~~~iGVSkamPiStG~QLVg~sL~gV~~f~EW~t~~~~IlG~iAliliviG~~lTs~~~~~nk~~~~~~n~  150 (288)
T COG4975          71 FGQANQFKAIQLIGVSKAMPISTGMQLVGTSLFGVFVFHEWTTPTQIILGFIALILIVIGIYLTSKQDRNNKEEENPSNL  150 (288)
T ss_pred             hhhhhhhhheeeeeeeccccccchhhHhhceeeeEEEEeccCcchhHHHHHHHHHHHHHhheEeeeeccccccccChHhh
Confidence            67888999999999998877664 455667788888898877655    33 1  11  11     111  123344556


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhhhcCCCchHHHHHHHHHHHHHHHHHHHhhcccccccccchhh-HHHHHHHHHHHHH
Q 041987          156 VLGSTLLAASSLSVCVWNIIQVGTIKQYPQVMKVVSFYSLAGTIQCSIFSLIMERNINAWKLKLNM-ELLLIIITAIFGS  234 (280)
Q Consensus       156 ~~G~~~~l~aa~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~~~t  234 (280)
                      ..|....+.+.+.|-.|.++.+...-+.-+..--.+..|..+++.+.   . ...   +  ...++ .|.. ..-|+. =
T Consensus       151 kkgi~~L~iSt~GYv~yvvl~~~f~v~g~saiLPqAiGMv~~ali~~---~-~~~---~--~~~~K~t~~n-ii~G~~-W  219 (288)
T COG4975         151 KKGIVILLISTLGYVGYVVLFQLFDVDGLSAILPQAIGMVIGALILG---F-FKM---E--KRFNKYTWLN-IIPGLI-W  219 (288)
T ss_pred             hhheeeeeeeccceeeeEeeeccccccchhhhhHHHHHHHHHHHHHh---h-ccc---c--cchHHHHHHH-HhhHHH-H
Confidence            78999999999999999998776532211133334444555554322   1 111   0  11111 1222 223332 2


Q ss_pred             HHHHHHHHhhhhccCcceeccccchHHHHHHHHHHHHhcCccc
Q 041987          235 VIRSTVHVSCAEMKGHLYVPMFKPFGIVFATAFGLTFFTNSLH  277 (280)
Q Consensus       235 ~~~~~~~~~a~~~~~~~~~s~~~~l~pv~a~~l~~~~l~E~it  277 (280)
                      +++...+..+.++.|..+.=.++-+..+.+.+=+.++++|+=|
T Consensus       220 a~GNl~ml~a~~~~GvAt~FSlSQlgViisTiGGIl~L~ekKt  262 (288)
T COG4975         220 AIGNLFMLLAAQKVGVATSFSLSQLGVIISTIGGILFLGEKKT  262 (288)
T ss_pred             HhhHHHHHHhhhhhceeeeeeHhhheeeeeecceEEEEeccCc
Confidence            3566777778888888887777888888899999999999744

>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins

Probab=94.79  E-value=0.13  Score=37.05  Aligned_cols=50  Identities=20%  Similarity=0.224  Sum_probs=28.7

Q ss_pred             HHHHHHHHHHHHhhhhccCccee-ccccchHHHHHHHHHHHHhcCccccCC
Q 041987          231 IFGSVIRSTVHVSCAEMKGHLYV-PMFKPFGIVFATAFGLTFFTNSLHYGR  280 (280)
Q Consensus       231 ~~~t~~~~~~~~~a~~~~~~~~~-s~~~~l~pv~a~~l~~~~l~E~it~~~  280 (280)
                      +.+-++++.++.+++|+.+.+.+ ++..-+..+...+.+++++||++|+.+
T Consensus        36 ~~~~~~s~~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s~~~   86 (93)
T PF00893_consen   36 VVGYGLSFYFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLSLSK   86 (93)
T ss_dssp             HHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH--------
T ss_pred             HHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHH
Confidence            33566889999999999999887 445568889999999999999999764

They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.

>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []

Probab=94.51  E-value=0.68  Score=40.83  Aligned_cols=121  Identities=20%  Similarity=0.213  Sum_probs=92.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHH-hCCCChHHHHHHHHHHHHHHHHHHHhh--hccc-CCCC-CCCCCHHHHHHHHHHHH
Q 041987           14 PFTLMVIMEGCTIGLTIVTKTAM-NGGMSPFVFIAYTNALGSILLLPYSFF--FHHR-GSEA-QPLFTLPLMLRFFFLGL   88 (280)
Q Consensus        14 ~~l~~~~~~~~wg~~~~~~k~~~-~~~~~p~~~~~~R~~~a~l~l~~~~~~--~~~~-~~~~-~~~~~~~~~~~~~~~gl   88 (280)
                      |+..++++.++=|...+.-+..+ +++.++.+..++-...+.+.+++....  . +. .+.. .....+..+..+....+
T Consensus       155 G~~ll~~sl~~~a~~~~~qe~~~~~~~~~~~~~mfy~n~~~~~~~~~~~~~l~~-~~~~~~~~f~~~~p~~~~~l~~~s~  233 (303)
T PF08449_consen  155 GIILLLLSLLLDAFTGVYQEKLFKKYGKSPWELMFYTNLFSLPFLLILLFLLPT-GEFRSAIRFISAHPSVLLYLLLFSL  233 (303)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHh-hHhhHHHHHHHHhHHHHHHHHHHHH
Confidence            89999999999999999998887 556999999999999999998887766  2 11 1000 00111223455555555


Q ss_pred             HHHHHHHHHHHHHhhccchhHHHHhhhhhHHHHHHHHHHhhccccCCc
Q 041987           89 TGVAISQNLAFFGLYYSSPIVVCVMGLLIPAISFLLSIITRKAASDDK  136 (280)
Q Consensus        89 ~g~~~~~~~~~~~l~~~~~~~a~vi~~~~P~~~~il~~i~~~ek~~~~  136 (280)
                      .+. ..+.+.+.-.+..++-..+++..+--+.+.+++.++++|+++..
T Consensus       234 ~~~-~g~~~i~~~~~~~~al~~t~v~t~Rk~~sillS~~~f~~~~~~~  280 (303)
T PF08449_consen  234 TGA-LGQFFIFYLIKKFSALTTTIVTTLRKFLSILLSVIIFGHPLSPL  280 (303)
T ss_pred             HHH-HHHHHHHHHHHhcCchhhhhHHHHHHHHHHHHHHHhcCCcCChH
Confidence            554 67778888899999999999999999999999999998877544

; GO: 0055085 transmembrane transport

>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins

Probab=93.22  E-value=0.27  Score=35.33  Aligned_cols=49  Identities=12%  Similarity=-0.057  Sum_probs=28.1

Q ss_pred             HHHHHHHHHHHHHHhhccchhHHHHh-hhhhHHHHHHHHHHhhccccCCc
Q 041987           88 LTGVAISQNLAFFGLYYSSPIVVCVM-GLLIPAISFLLSIITRKAASDDK  136 (280)
Q Consensus        88 l~g~~~~~~~~~~~l~~~~~~~a~vi-~~~~P~~~~il~~i~~~ek~~~~  136 (280)
                      +.+.....+++..++++.|.+.+-.+ .....+.+.+.+.++++|+++..
T Consensus        36 ~~~~~~s~~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s~~   85 (93)
T PF00893_consen   36 VVGYGLSFYFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLSLS   85 (93)
T ss_dssp             HHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH-------
T ss_pred             HHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHH
Confidence            33445678899999999999999555 46889999999999999999876

They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.

>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins

Probab=93.16  E-value=0.99  Score=35.01  Aligned_cols=108  Identities=10%  Similarity=-0.013  Sum_probs=73.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHhhhhcCCCchHHHHHHHHHHHHHHHHHHHhhcccccccccchhhHHHHHHHHHHHHHHHHH
Q 041987          159 STLLAASSLSVCVWNIIQVGTIKQYPQVMKVVSFYSLAGTIQCSIFSLIMERNINAWKLKLNMELLLIIITAIFGSVIRS  238 (280)
Q Consensus       159 ~~~~l~aa~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~t~~~~  238 (280)
                      .++++.+...-+.-...+.++.++.++|...+...+..|.+....+..+.++.  +........|+... -|+++ +.--
T Consensus         3 ~lla~~aG~~i~~q~~~N~~L~~~~gs~~~as~i~~~~G~i~~~i~~~~~~~~--~~~~~~~~p~w~~l-GG~lG-~~~V   78 (138)
T PF04657_consen    3 ILLALLAGALIALQAAFNGQLGKALGSPLVASFISFGVGFILLLIILLITGRP--SLASLSSVPWWAYL-GGLLG-VFFV   78 (138)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHHHHhccc--ccchhccCChHHhc-cHHHH-HHHH
Confidence            46788888888999999999888876799999999999999988877766542  22211112233222 45544 4555


Q ss_pred             HHHHhhhhccCcceecc-ccchHHHHHHHHHHH
Q 041987          239 TVHVSCAEMKGHLYVPM-FKPFGIVFATAFGLT  270 (280)
Q Consensus       239 ~~~~~a~~~~~~~~~s~-~~~l~pv~a~~l~~~  270 (280)
                      ......+++.|++.+.. ...-|-+.+.+++.+
T Consensus        79 ~~~~~~vp~lG~~~~~~l~~~GQl~~sl~iD~f  111 (138)
T PF04657_consen   79 LSNIILVPRLGAALTTILIVAGQLIASLLIDHF  111 (138)
T ss_pred             HHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHc
Confidence            66777889999886544 344556666666654

>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function

Probab=92.16  E-value=0.54  Score=41.56  Aligned_cols=102  Identities=14%  Similarity=0.137  Sum_probs=69.3

Q ss_pred             chhHHHHHHHHHHHHHHHHHHHHHHhhhhcCCC-chHHHHHHHHHHHHHHHHHHHhhcccccccccchhhHHHHHHHHHH
Q 041987          153 DRWVLGSTLLAASSLSVCVWNIIQVGTIKQYPQ-VMKVVSFYSLAGTIQCSIFSLIMERNINAWKLKLNMELLLIIITAI  231 (280)
Q Consensus       153 ~~~~~G~~~~l~aa~~~a~~~v~~~~~~~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~  231 (280)
                      .++..|..+++.++++.+...+++|+...+.++ +....  ..        +...        +  ..+.+|..+     
T Consensus         3 ~~~~iGv~lav~ss~~~~~g~~lqk~~~~r~~~~~~~~~--~~--------~~~~--------l--~~~~W~~G~-----   57 (300)
T PF05653_consen    3 TDFYIGVLLAVVSSIFIAVGFNLQKKSHLRLPRGSLRAG--SG--------GRSY--------L--RRPLWWIGL-----   57 (300)
T ss_pred             chhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccc--ch--------hhHH--------H--hhHHHHHHH-----
Confidence            456789999999999999999999987665431 00000  00        0000        0  011122222     


Q ss_pred             HHHHHHHHHHHhhhhccCcceeccccchHHHHHHHHHHHHhcCccccC
Q 041987          232 FGSVIRSTVHVSCAEMKGHLYVPMFKPFGIVFATAFGLTFFTNSLHYG  279 (280)
Q Consensus       232 ~~t~~~~~~~~~a~~~~~~~~~s~~~~l~pv~a~~l~~~~l~E~it~~  279 (280)
                      ...+++......++...+++.++++..+.-++..+++..++||+++..
T Consensus        58 ~~~~~g~~~~~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~~~~  105 (300)
T PF05653_consen   58 LLMVLGEILNFVALGFAPASLVAPLGALSLVFNAVLARFFLGEKLTRR  105 (300)
T ss_pred             HHHhcchHHHHHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcccchHh
Confidence            223345556667888889999999999999999999999999999853

>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins

Probab=90.72  E-value=5.9  Score=30.67  Aligned_cols=105  Identities=16%  Similarity=0.087  Sum_probs=65.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhCCC-ChHHHHHHHHHHHHHHHHHHHhhhcccCCCCCCCCCHHHHHHHHHHHHHHHHHHH
Q 041987           17 LMVIMEGCTIGLTIVTKTAMNGGM-SPFVFIAYTNALGSILLLPYSFFFHHRGSEAQPLFTLPLMLRFFFLGLTGVAISQ   95 (280)
Q Consensus        17 ~~~~~~~~wg~~~~~~k~~~~~~~-~p~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~g~~~~~   95 (280)
                      ..+++..+-+....+--..-+. . +|+...+.-+..+.+.+..+.... +++..  ++.+..+|+ ...-|++|. ..-
T Consensus         5 la~~aG~~i~~q~~~N~~L~~~-~gs~~~as~i~~~~G~i~~~i~~~~~-~~~~~--~~~~~~p~w-~~lGG~lG~-~~V   78 (138)
T PF04657_consen    5 LALLAGALIALQAAFNGQLGKA-LGSPLVASFISFGVGFILLLIILLIT-GRPSL--ASLSSVPWW-AYLGGLLGV-FFV   78 (138)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHH-hCccHHHHHHHHHHHHHHHHHHHHHh-ccccc--chhccCChH-HhccHHHHH-HHH
Confidence            3344444444444443333343 4 599999999999999998888776 44322  222222233 333778885 677


Q ss_pred             HHHHHHhhccchhHHHHhhhh-hHHHHHHHHHH
Q 041987           96 NLAFFGLYYSSPIVVCVMGLL-IPAISFLLSII  127 (280)
Q Consensus        96 ~~~~~~l~~~~~~~a~vi~~~-~P~~~~il~~i  127 (280)
                      .+..+.....+++.+..+.-+ +-+...+++.+
T Consensus        79 ~~~~~~vp~lG~~~~~~l~~~GQl~~sl~iD~f  111 (138)
T PF04657_consen   79 LSNIILVPRLGAALTTILIVAGQLIASLLIDHF  111 (138)
T ss_pred             HHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHc
Confidence            788888999998888777643 34444555543

>PRK13499 rhamnose-proton symporter; Provisional

Probab=90.47  E-value=11  Score=34.11  Aligned_cols=124  Identities=12%  Similarity=0.056  Sum_probs=67.0

Q ss_pred             cchhhHHHHHHHHHHHHHHHH-------HHHHHHHhCCCChHHHHHHHHH---HHHHHH-HHHHhhhcccCCCC----CC
Q 041987            9 EEEMVPFTLMVIMEGCTIGLT-------IVTKTAMNGGMSPFVFIAYTNA---LGSILL-LPYSFFFHHRGSEA----QP   73 (280)
Q Consensus         9 ~~~~~~~l~~~~~~~~wg~~~-------~~~k~~~~~~~~p~~~~~~R~~---~a~l~l-~~~~~~~~~~~~~~----~~   73 (280)
                      .+..|++..++++.+..+...       +.-+.+.+.|.+|.....--+.   ++..+. +.++.+.++|++..    .+
T Consensus       170 ~~~~KGi~ialisgi~~~~f~~~~~~~~~~~~~a~~~g~~~~~~~lp~~~~~~~G~~~~n~~~~~~~~~k~~~~~~~~~~  249 (345)
T PRK13499        170 FNLKKGLILAVMSGIFSACFSFAMDAGKPMHEAAAALGVDPLYAALPSYVVIMGGGAITNLGFCFIRLAKNKDLSLKADF  249 (345)
T ss_pred             cchHhHHHHHHHHHHHHHHHHHHHhhccchhhhhhhcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCcccchhc
Confidence            345789999999999888877       6666665667888776666665   443333 23333210121110    01


Q ss_pred             CCCHHHHHHH----HHHHHHHHHHHHHHHHHHhhccchhHHHH---hh-hhhHHHHHHHHHHhhccccC
Q 041987           74 LFTLPLMLRF----FFLGLTGVAISQNLAFFGLYYSSPIVVCV---MG-LLIPAISFLLSIITRKAASD  134 (280)
Q Consensus        74 ~~~~~~~~~~----~~~gl~g~~~~~~~~~~~l~~~~~~~a~v---i~-~~~P~~~~il~~i~~~ek~~  134 (280)
                      +-+++.+.+-    .+.|++= .+.+.++..|-+..+.+.+.+   +. ++..++..+.+. ++||+-+
T Consensus       250 ~~~~~~~~~n~l~~~l~G~~W-~~~~~~y~~~~~~~g~~~~~~sw~l~m~~~ViistlwGi-~lkE~K~  316 (345)
T PRK13499        250 SLAKPLLITNVLLSALAGVMW-YLQFFFYAMGHSKLGAQYDFVSWMLHMSFYVLCGNLWGL-VLKEWKG  316 (345)
T ss_pred             cccchhHHHHHHHHHHHHHHH-HHHHHHHHHHHHHcCCccchHHHHHhccHHHHHHHHhhh-hhhhccC
Confidence            1122223333    3334333 245556666666665444443   44 344455555555 6899875

>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]

Probab=89.79  E-value=0.64  Score=41.26  Aligned_cols=103  Identities=8%  Similarity=0.101  Sum_probs=74.8

Q ss_pred             HHHHHhhhh--cCCCchHHHHHHHHHHHHHHHHHHHhhcccccccccchhhHHHHHHHHHHHHHHHHHHHHHhhhhccCc
Q 041987          173 NIIQVGTIK--QYPQVMKVVSFYSLAGTIQCSIFSLIMERNINAWKLKLNMELLLIIITAIFGSVIRSTVHVSCAEMKGH  250 (280)
Q Consensus       173 ~v~~~~~~~--~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~t~~~~~~~~~a~~~~~~  250 (280)
                      ++++|+..+  +.+.|...+..+..++.+.....-.+...+  ..+..++..+..++-+|++. .++..+-+.++++.+.
T Consensus        33 ~~~nK~il~~~~f~~p~~lt~~~~~~~~l~~~v~~~l~~~~--~~~~~~~~~~~~llpl~~~~-~~~~v~~n~Sl~~v~V  109 (316)
T KOG1441|consen   33 IILNKYILSKYGFPFPITLTMLHLFCGALALLVIKVLKLVP--PSKISSKLPLRTLLPLGLVF-CISHVLGNVSLSYVPV  109 (316)
T ss_pred             EEeeHhhhccCCCCCccHHHHHHHHHHHHHHHHHHHhcCCC--CCccccccchHHHHHHHHHH-HHHHHhcchhhhccch
Confidence            356788877  555677788777767776665554432222  11121223466667777754 4788888999999999


Q ss_pred             ceeccccchHHHHHHHHHHHHhcCcccc
Q 041987          251 LYVPMFKPFGIVFATAFGLTFFTNSLHY  278 (280)
Q Consensus       251 ~~~s~~~~l~pv~a~~l~~~~l~E~it~  278 (280)
                      +..=....++|+++.++++++.+|+.+.
T Consensus       110 sF~q~iKa~~P~~tvl~~~~~~~~~~s~  137 (316)
T KOG1441|consen  110 SFYQTIKALMPPFTVLLSVLLLGKTYSS  137 (316)
T ss_pred             hHHHHHHhhcchhHHHHHHHHhCCCCcc
Confidence            9999999999999999999999998765

>PRK09541 emrE multidrug efflux protein; Reviewed

Probab=88.36  E-value=0.66  Score=34.50  Aligned_cols=49  Identities=14%  Similarity=0.096  Sum_probs=36.1

Q ss_pred             HHHHHHHHHHHHhhhhccCcceecc-ccchHHHHHHHHHHHHhcCccccC
Q 041987          231 IFGSVIRSTVHVSCAEMKGHLYVPM-FKPFGIVFATAFGLTFFTNSLHYG  279 (280)
Q Consensus       231 ~~~t~~~~~~~~~a~~~~~~~~~s~-~~~l~pv~a~~l~~~~l~E~it~~  279 (280)
                      +.+-++++.++.+++|+.+...+=. ..-+.-+.+.+++++++||++|+.
T Consensus        37 ~~~~~~sf~~l~~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~~~~   86 (110)
T PRK09541         37 IICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLP   86 (110)
T ss_pred             HHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHH
Confidence            4455678888888888887775422 234567778899999999999874

>PRK10452 multidrug efflux system protein MdtJ; Provisional

Probab=87.76  E-value=0.77  Score=34.72  Aligned_cols=49  Identities=16%  Similarity=0.149  Sum_probs=38.7

Q ss_pred             HHHHHHHHHHHHhhhhccCcceeccc-cchHHHHHHHHHHHHhcCccccC
Q 041987          231 IFGSVIRSTVHVSCAEMKGHLYVPMF-KPFGIVFATAFGLTFFTNSLHYG  279 (280)
Q Consensus       231 ~~~t~~~~~~~~~a~~~~~~~~~s~~-~~l~pv~a~~l~~~~l~E~it~~  279 (280)
                      +..-+++++++.+++|+.+...+=.. .-+--+...+++++++||++|+.
T Consensus        37 i~~~~~sf~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~~   86 (120)
T PRK10452         37 LVMISLSYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLM   86 (120)
T ss_pred             HHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHH
Confidence            44556889999999999988765333 34677888999999999999874

>KOG1583 consensus UDP-N-acetylglucosamine transporter [Carbohydrate transport and metabolism]

Probab=87.43  E-value=16  Score=31.83  Aligned_cols=193  Identities=13%  Similarity=0.084  Sum_probs=112.5

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcc-chhHHHHhhhhhHHHHHHHHHHhhccccCCc----------ceeee
Q 041987           73 PLFTLPLMLRFFFLGLTGVAISQNLAFFGLYYS-SPIVVCVMGLLIPAISFLLSIITRKAASDDK----------LEAKI  141 (280)
Q Consensus        73 ~~~~~~~~~~~~~~gl~g~~~~~~~~~~~l~~~-~~~~a~vi~~~~P~~~~il~~i~~~ek~~~~----------g~~ii  141 (280)
                      +|.+.|++....  ..+  +..+.+.++++++- +.-.=-++=.-.++-++++++++.|+|-+.+          |+.+.
T Consensus        60 ~kiplk~Y~i~V--~mF--F~vnv~NN~al~f~I~~PlHiIfRsgsll~nM~~g~il~~k~Ys~~Qy~Sv~~iTiGiiIc  135 (330)
T KOG1583|consen   60 PKIPLKDYAITV--AMF--FIVNVTNNYALKFNIPMPLHIIFRSGSLLANMILGWILLGKRYSLRQYSSVLMITIGIIIC  135 (330)
T ss_pred             CCCchhhhheeh--hee--eeeeeeccceeeecccceEEEEEecCcHHHHHHHHHHhccceeehhhhhhHHhhhhhheeE
Confidence            677777655433  222  24566778888873 2222122224568889999999999999988          22111


Q ss_pred             --CC-CCC----------CCCCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhhcCC-CchHHHHHHHHHHHHHHHHHHHh
Q 041987          142 --NP-PLL----------IFYSTPDRWVLGSTLLAASSLSVCVWNIIQVGTIKQYP-QVMKVVSFYSLAGTIQCSIFSLI  207 (280)
Q Consensus       142 --~~-~~~----------~~~~~~~~~~~G~~~~l~aa~~~a~~~v~~~~~~~~~~-~~~~~~~~~~~~~~i~~~~~~~~  207 (280)
                        .. .+.          +.+.....+..|+.+...|-+.-|...+.++..=++++ ++-+.+++.=+.+.    |.-++
T Consensus       136 Tl~s~~d~~~~~~~l~~~~~~~~~~~w~iGi~lL~~al~~sa~mgiyqE~~Y~kyGKh~~EalFytH~LsL----P~Flf  211 (330)
T KOG1583|consen  136 TLFSSKDGRSKLSGLDSGSAQSDFFWWLIGIALLVFALLLSAYMGIYQETTYQKYGKHWKEALFYTHFLSL----PLFLF  211 (330)
T ss_pred             EeecCcchhhhhcccccCcccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHhcc----chHHH
Confidence              11 111          01112234568888888888888888888877766654 45567766543332    22222


Q ss_pred             hcccc-c--------------ccccchhhHHHHHHHHHHHHHHHHHHHHHhhhh----ccCcceeccccchHHHHHHHHH
Q 041987          208 MERNI-N--------------AWKLKLNMELLLIIITAIFGSVIRSTVHVSCAE----MKGHLYVPMFKPFGIVFATAFG  268 (280)
Q Consensus       208 ~~~~~-~--------------~~~~~~~~~~~~~~~~g~~~t~~~~~~~~~a~~----~~~~~~~s~~~~l~pv~a~~l~  268 (280)
                      ..+|. .              ......+..|.+++     ...+.++.=.+++.    +.++-.+++...+.-.++.+++
T Consensus       212 ~~~div~~~~~~~~se~~~~p~~g~~vP~~~~yLl-----~n~L~Qy~CikgVy~L~te~~sLTVTlvltlRKFvSLl~S  286 (330)
T KOG1583|consen  212 MGDDIVSHWRLAFKSESYLIPLLGFKVPSMWVYLL-----FNVLTQYFCIKGVYILTTETSSLTVTLVLTLRKFVSLLFS  286 (330)
T ss_pred             hcchHHHHHHHHhcCcceeccccCccccHHHHHHH-----HHHHHHHHHHHhhhhhhceecceEEEEeeeHHHHHHHhhe
Confidence            22210 0              01111223444433     33344444444443    4455567888889999999999


Q ss_pred             HHHhcCcccc
Q 041987          269 LTFFTNSLHY  278 (280)
Q Consensus       269 ~~~l~E~it~  278 (280)
                      .+.+++++|+
T Consensus       287 iiyF~Npft~  296 (330)
T KOG1583|consen  287 IIYFENPFTP  296 (330)
T ss_pred             eeEecCCCCH
Confidence            9999999886

>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function

Probab=86.87  E-value=2.8  Score=31.29  Aligned_cols=95  Identities=8%  Similarity=-0.008  Sum_probs=60.0

Q ss_pred             HHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHhhhcccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
Q 041987           19 VIMEGCTIGLTIVTKTAMNGGMSPFVFIAYTNALGSILLLPYSFFFHHRGSEAQPLFTLPLMLRFFFLGLTGVAISQNLA   98 (280)
Q Consensus        19 ~~~~~~wg~~~~~~k~~~~~~~~p~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~g~~~~~~~~   98 (280)
                      +++.++||.+.+++|.+.+. .++..-.. |..-....     .+           .+++....   . ++.. .....|
T Consensus         2 l~Vg~~WG~Tnpfik~g~~~-~~~~~~~~-~~~~~~~~-----Ll-----------~n~~y~ip---f-~lNq-~GSv~f   58 (113)
T PF10639_consen    2 LLVGILWGCTNPFIKRGSSG-LEKVKASL-QLLQEIKF-----LL-----------LNPKYIIP---F-LLNQ-SGSVLF   58 (113)
T ss_pred             eeehHHhcCchHHHHHHHhh-cCCccchH-HHHHHHHH-----HH-----------HhHHHHHH---H-HHHH-HHHHHH
Confidence            45788999999999999865 55555441 31111111     11           12222211   1 1222 456788


Q ss_pred             HHHhhccchhHHHHhh-hhhHHHHHHHHHHhhccccCCc
Q 041987           99 FFGLYYSSPIVVCVMG-LLIPAISFLLSIITRKAASDDK  136 (280)
Q Consensus        99 ~~~l~~~~~~~a~vi~-~~~P~~~~il~~i~~~ek~~~~  136 (280)
                      ++.+...+.+.+.-+. ++.=++|++.++++.+|..+++
T Consensus        59 ~~~L~~~dlSlavPi~Nsl~fvfT~l~g~~lge~~~~~~   97 (113)
T PF10639_consen   59 FLLLGSADLSLAVPIANSLAFVFTALTGWLLGEEVISRR   97 (113)
T ss_pred             HHHHhcCCceeeehHHhHHHHHHHHHHHHHhcCcccchh
Confidence            9999999999999997 5666788888877766665554

Many members are annotated as potential transmembrane proteins.

>PRK10650 multidrug efflux system protein MdtI; Provisional

Probab=86.82  E-value=3.4  Score=30.67  Aligned_cols=49  Identities=14%  Similarity=0.156  Sum_probs=37.4

Q ss_pred             HHHHHHHHHHHHhhhhccCccee-ccccchHHHHHHHHHHHHhcCccccC
Q 041987          231 IFGSVIRSTVHVSCAEMKGHLYV-PMFKPFGIVFATAFGLTFFTNSLHYG  279 (280)
Q Consensus       231 ~~~t~~~~~~~~~a~~~~~~~~~-s~~~~l~pv~a~~l~~~~l~E~it~~  279 (280)
                      +.+-+++|++..+++|+.|...+ ++..-+--+.+.+.+++++||++|+.
T Consensus        42 ~~~~~~sf~~Ls~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~~~   91 (109)
T PRK10650         42 LAAVLAAFSALSQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNRK   91 (109)
T ss_pred             HHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCCHH
Confidence            33556888999999999887753 44445666778889999999999874

>PRK10452 multidrug efflux system protein MdtJ; Provisional

Probab=86.48  E-value=2.2  Score=32.25  Aligned_cols=50  Identities=12%  Similarity=-0.061  Sum_probs=42.6

Q ss_pred             HHHHHHHHHHHHHHHhhccchhHHHHhh-hhhHHHHHHHHHHhhccccCCc
Q 041987           87 GLTGVAISQNLAFFGLYYSSPIVVCVMG-LLIPAISFLLSIITRKAASDDK  136 (280)
Q Consensus        87 gl~g~~~~~~~~~~~l~~~~~~~a~vi~-~~~P~~~~il~~i~~~ek~~~~  136 (280)
                      .+.++...++++..++++.+.+.+-.+- ...-+.+++++.++++|+++..
T Consensus        36 ~i~~~~~sf~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~~   86 (120)
T PRK10452         36 MLVMISLSYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLM   86 (120)
T ss_pred             HHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHH
Confidence            4455567889999999999999888775 5778889999999999999988

>PRK09541 emrE multidrug efflux protein; Reviewed

Probab=85.58  E-value=3.8  Score=30.43  Aligned_cols=50  Identities=16%  Similarity=-0.138  Sum_probs=41.4

Q ss_pred             HHHHHHHHHHHHHHHhhccchhHHHHhh-hhhHHHHHHHHHHhhccccCCc
Q 041987           87 GLTGVAISQNLAFFGLYYSSPIVVCVMG-LLIPAISFLLSIITRKAASDDK  136 (280)
Q Consensus        87 gl~g~~~~~~~~~~~l~~~~~~~a~vi~-~~~P~~~~il~~i~~~ek~~~~  136 (280)
                      .+.+..+.++++..+++..|.+.+-.+- ...-..+.+++++++||+++..
T Consensus        36 ~~~~~~~sf~~l~~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~~~~   86 (110)
T PRK09541         36 TIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLP   86 (110)
T ss_pred             HHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHH
Confidence            3455567788899999999999887774 4677888999999999999987

>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]

Probab=81.72  E-value=23  Score=31.39  Aligned_cols=144  Identities=12%  Similarity=0.108  Sum_probs=94.7

Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHHHhC-CCChHHHHHHHHHHHHHHHHHHHhhhccc----CCCCCCCCCHHHHHHHHH
Q 041987           11 EMVPFTLMVIMEGCTIGLTIVTKTAMNG-GMSPFVFIAYTNALGSILLLPYSFFFHHR----GSEAQPLFTLPLMLRFFF   85 (280)
Q Consensus        11 ~~~~~l~~~~~~~~wg~~~~~~k~~~~~-~~~p~~~~~~R~~~a~l~l~~~~~~~~~~----~~~~~~~~~~~~~~~~~~   85 (280)
                      +..|+.++....+.=+...+..|...+. +.+-+..+++-.+.+.+.+....+.. +.    ....++-.+...+..+.+
T Consensus       155 ~~~gY~w~~~n~~~~a~~~v~~kk~vd~~~l~~~~lv~yNnl~~L~~l~~~~~~~-ge~~~l~~~~~~~~~~~~~~~~~l  233 (314)
T KOG1444|consen  155 NLRGYSWALANCLTTAAFVVYVKKSVDSANLNKFGLVFYNNLLSLPPLLILSFIT-GELDALSLNFDNWSDSSVLVVMLL  233 (314)
T ss_pred             cchhHHHHHHHHHHHHHHHHHHHHhhccccccceeEEeehhHHHHHHHHHHHHHh-cchHHHHhhcccccchhHHHHHHH
Confidence            3457788888888878888888877643 37778899999999999887776554 32    111001122334667777


Q ss_pred             HHHHHHHHHHHHHHHHhhccchhHHHHhhhhhHHHHHHHHHHhhccccCCcceeeeCCCCCCCCCCCchhHHHHHHHHHH
Q 041987           86 LGLTGVAISQNLAFFGLYYSSPIVVCVMGLLIPAISFLLSIITRKAASDDKLEAKINPPLLIFYSTPDRWVLGSTLLAAS  165 (280)
Q Consensus        86 ~gl~g~~~~~~~~~~~l~~~~~~~a~vi~~~~P~~~~il~~i~~~ek~~~~g~~ii~~~~~~~~~~~~~~~~G~~~~l~a  165 (280)
                      .|++|. .-.++-++..+++++...++....+=+.+.+...++.+++.                  ......|..+.+++
T Consensus       234 Scv~gf-~isy~s~~ct~~~SAtT~tivG~~n~l~t~l~~ll~~d~~~------------------~~~n~~gll~~~~g  294 (314)
T KOG1444|consen  234 SCVMGF-GISYTSFLCTRVNSATTTTIVGAKNKLLTYLGGLLFGDKPF------------------TFLNVIGLLVGFFG  294 (314)
T ss_pred             HHHHHH-HHHHHHHHHHhhccccceeehhhhhhHHHHHHHHhcCCcee------------------chhhhHHHHHHhhh
Confidence            788886 45578888999999888888775455555554444444443                  22345677777777


Q ss_pred             HHHHHHHHH
Q 041987          166 SLSVCVWNI  174 (280)
Q Consensus       166 a~~~a~~~v  174 (280)
                      +.-|+.-.-
T Consensus       295 gv~Y~~~~~  303 (314)
T KOG1444|consen  295 GVLYSYATF  303 (314)
T ss_pred             hhHHhhhhh
Confidence            777776443

>KOG2765 consensus Predicted membrane protein [Function unknown]

Probab=81.20  E-value=8.4  Score=34.89  Aligned_cols=123  Identities=15%  Similarity=0.187  Sum_probs=84.3

Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHHHhCC---CChHHHHHHHHHHHHHHHHHHHhhhccc--CCCCCCCCCHHHHHHHHH
Q 041987           11 EMVPFTLMVIMEGCTIGLTIVTKTAMNGG---MSPFVFIAYTNALGSILLLPYSFFFHHR--GSEAQPLFTLPLMLRFFF   85 (280)
Q Consensus        11 ~~~~~l~~~~~~~~wg~~~~~~k~~~~~~---~~p~~~~~~R~~~a~l~l~~~~~~~~~~--~~~~~~~~~~~~~~~~~~   85 (280)
                      ...|.++.+++++.+|.-.++.|.=.++.   +|--.+-.+=-+...++++|..+.. ++  ..++ +-.+..+...+.+
T Consensus       245 ~llG~llaL~sA~~YavY~vllk~~~~~eg~rvdi~lffGfvGLfnllllwP~l~iL-~~~~~e~F-~lP~~~q~~~vv~  322 (416)
T KOG2765|consen  245 PLLGNLLALLSALLYAVYTVLLKRKIGDEGERVDIQLFFGFVGLFNLLLLWPPLIIL-DFFGEERF-ELPSSTQFSLVVF  322 (416)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHHHhHHHHHH-HHhccCcc-cCCCCceeEeeeH
Confidence            35789999999999999999999876432   4544455555566666677654432 11  1111 2233344566777


Q ss_pred             HHHHHHHHHHHHHHHHhhccchhHHHHhhh-hhHHHHHHHHHHhhccccCCc
Q 041987           86 LGLTGVAISQNLAFFGLYYSSPIVVCVMGL-LIPAISFLLSIITRKAASDDK  136 (280)
Q Consensus        86 ~gl~g~~~~~~~~~~~l~~~~~~~a~vi~~-~~P~~~~il~~i~~~ek~~~~  136 (280)
                      .|+++.+..-++|.+|.-.|++-.+++=.. +.|+ .++...++.+++++..
T Consensus       323 ~~ligtvvSDylW~~a~~lTs~Lv~TlgmSltIPL-A~~aD~l~k~~~~S~~  373 (416)
T KOG2765|consen  323 NNLIGTVVSDYLWAKAVLLTSPLVVTLGMSLTIPL-AMFADVLIKGKHPSAL  373 (416)
T ss_pred             hhHHHHHHHHHHHHHHHHhccchhheeeeeEeeeH-HHHHHHHHcCCCCCHH
Confidence            889999999999999999999987777665 4454 3566666767777766

>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]

Probab=80.99  E-value=5.8  Score=29.21  Aligned_cols=49  Identities=12%  Similarity=-0.054  Sum_probs=40.2

Q ss_pred             HHHHHHHHHHHHHHhhccchhHHHHhh-hhhHHHHHHHHHHhhccccCCc
Q 041987           88 LTGVAISQNLAFFGLYYSSPIVVCVMG-LLIPAISFLLSIITRKAASDDK  136 (280)
Q Consensus        88 l~g~~~~~~~~~~~l~~~~~~~a~vi~-~~~P~~~~il~~i~~~ek~~~~  136 (280)
                      +++....+.+.-.++|++|.+.+-.+- ..--.-+++.++++++||.+..
T Consensus        37 ~v~~~~sf~~Ls~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~~~   86 (106)
T COG2076          37 IVGYGLSFYLLSLALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLSLI   86 (106)
T ss_pred             HHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCCHH
Confidence            344456788899999999998886665 4667889999999999999987

>PRK10650 multidrug efflux system protein MdtI; Provisional

Probab=80.72  E-value=21  Score=26.48  Aligned_cols=49  Identities=12%  Similarity=-0.111  Sum_probs=40.1

Q ss_pred             HHHHHHHHHHHHHHhhccchhHHHHhh-hhhHHHHHHHHHHhhccccCCc
Q 041987           88 LTGVAISQNLAFFGLYYSSPIVVCVMG-LLIPAISFLLSIITRKAASDDK  136 (280)
Q Consensus        88 l~g~~~~~~~~~~~l~~~~~~~a~vi~-~~~P~~~~il~~i~~~ek~~~~  136 (280)
                      +.+.....++.-.++|+.|.+.+-.+- ...-+.+.+++.+++||+++..
T Consensus        42 ~~~~~~sf~~Ls~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~~~   91 (109)
T PRK10650         42 LAAVLAAFSALSQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNRK   91 (109)
T ss_pred             HHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCCHH
Confidence            344456788899999999998886665 4667888999999999999977

>PRK11431 multidrug efflux system protein; Provisional

Probab=80.33  E-value=2.5  Score=31.13  Aligned_cols=49  Identities=10%  Similarity=0.070  Sum_probs=36.8

Q ss_pred             HHHHHHHHHHHHhhhhccCccee-ccccchHHHHHHHHHHHHhcCccccC
Q 041987          231 IFGSVIRSTVHVSCAEMKGHLYV-PMFKPFGIVFATAFGLTFFTNSLHYG  279 (280)
Q Consensus       231 ~~~t~~~~~~~~~a~~~~~~~~~-s~~~~l~pv~a~~l~~~~l~E~it~~  279 (280)
                      +.+-+++|++..+++|+.|...+ ++..-+--+.+.+.+++++||++|+.
T Consensus        36 i~~~~~sf~~Ls~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~~~   85 (105)
T PRK11431         36 VTAMIVSMALLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESASPA   85 (105)
T ss_pred             HHHHHHHHHHHHHHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCCHH
Confidence            33556788888888888877653 44444667778899999999999874

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	280
2i68_A	137	Protein EMRE; transmembrane protein, small-multidr	97.95
3b5d_A	110	Multidrug transporter EMRE; helical membrane prote	97.4
2i68_A	137	Protein EMRE; transmembrane protein, small-multidr	96.9
3b5d_A	110	Multidrug transporter EMRE; helical membrane prote	96.89

>2i68_A Protein EMRE; transmembrane protein, small-multidrug resistance, transporter, homodimer, dual topology, transport protein; NMR {Escherichia coli}

Probab=97.95  E-value=6e-06  Score=63.02  Aligned_cols=53  Identities=13%  Similarity=0.085  Sum_probs=38.6

Q ss_pred             HHHHHHHHHHHHHHHhhhhccCcceeccc-cchHHHHHHHHHHHHhcCccccCC
Q 041987          228 ITAIFGSVIRSTVHVSCAEMKGHLYVPMF-KPFGIVFATAFGLTFFTNSLHYGR  280 (280)
Q Consensus       228 ~~g~~~t~~~~~~~~~a~~~~~~~~~s~~-~~l~pv~a~~l~~~~l~E~it~~~  280 (280)
                      .+++++++++|++|++++|+.+++++..+ ..+.|+++.++|++++||++|+.+
T Consensus        34 ~l~i~~~~ls~~l~~~alk~i~~s~ay~iw~~l~pv~~~l~g~l~lgE~ls~~~   87 (137)
T 2i68_A           34 VGTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPA   87 (137)
T ss_dssp             CHHHHHHHHHHHHHHHHHC-----CHHHHHHHHHHHHHHHHHHHHHC------C
T ss_pred             HHHHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHhCCCCCHHH
Confidence            35677889999999999999999999998 899999999999999999999764

>3b5d_A Multidrug transporter EMRE; helical membrane protein, multidrug resistance transporter, SMR, antiport, inner membrane, transmembrane; HET: P4P; 3.80A {Escherichia coli K12} PDB: 3b61_A 3b62_A*

Probab=97.40  E-value=0.00012  Score=53.68  Aligned_cols=51  Identities=14%  Similarity=0.072  Sum_probs=46.8

Q ss_pred             HHHHHHHHHHHHHHhhhhccCcceeccc-cchHHHHHHHHHHHHhcCccccC
Q 041987          229 TAIFGSVIRSTVHVSCAEMKGHLYVPMF-KPFGIVFATAFGLTFFTNSLHYG  279 (280)
Q Consensus       229 ~g~~~t~~~~~~~~~a~~~~~~~~~s~~-~~l~pv~a~~l~~~~l~E~it~~  279 (280)
                      .++++.+++|.++.+++|+.|.+++... ..+.|+++.+++++++||++|+.
T Consensus        35 ~~~~~~~~~~~~~~~al~~~p~s~ay~i~~g~~~v~~~l~~~~~~~E~~s~~   86 (110)
T 3b5d_A           35 GTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLP   86 (110)
T ss_pred             HHHHHHHHHHHHHHHHHHhCChhhHHHHHhhHHHHHHHHHHHHHhCCCCCHH
Confidence            5566788999999999999999999888 89999999999999999999874

>2i68_A Protein EMRE; transmembrane protein, small-multidrug resistance, transporter, homodimer, dual topology, transport protein; NMR {Escherichia coli}

Probab=96.90  E-value=0.0012  Score=50.12  Aligned_cols=52  Identities=15%  Similarity=-0.132  Sum_probs=36.7

Q ss_pred             HHHHHHHHHHHHHHHHHhhccchhHHHHh-hhhhHHHHHHHHHHhhccccCCc
Q 041987           85 FLGLTGVAISQNLAFFGLYYSSPIVVCVM-GLLIPAISFLLSIITRKAASDDK  136 (280)
Q Consensus        85 ~~gl~g~~~~~~~~~~~l~~~~~~~a~vi-~~~~P~~~~il~~i~~~ek~~~~  136 (280)
                      +.++++..+.++++.+++++.+++.+..+ .++.|++++++++++++|+++..
T Consensus        34 ~l~i~~~~ls~~l~~~alk~i~~s~ay~iw~~l~pv~~~l~g~l~lgE~ls~~   86 (137)
T 2i68_A           34 VGTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLP   86 (137)
T ss_dssp             CHHHHHHHHHHHHHHHHHC-----CHHHHHHHHHHHHHHHHHHHHHC------
T ss_pred             HHHHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHhCCCCCHH
Confidence            45666677889999999999999999888 79999999999999999999766

>3b5d_A Multidrug transporter EMRE; helical membrane protein, multidrug resistance transporter, SMR, antiport, inner membrane, transmembrane; HET: P4P; 3.80A {Escherichia coli K12} PDB: 3b61_A 3b62_A*

Probab=96.89  E-value=0.0021  Score=46.88  Aligned_cols=52  Identities=15%  Similarity=-0.132  Sum_probs=46.1

Q ss_pred             HHHHHHHHHHHHHHHHHhhccchhHHHHh-hhhhHHHHHHHHHHhhccccCCc
Q 041987           85 FLGLTGVAISQNLAFFGLYYSSPIVVCVM-GLLIPAISFLLSIITRKAASDDK  136 (280)
Q Consensus        85 ~~gl~g~~~~~~~~~~~l~~~~~~~a~vi-~~~~P~~~~il~~i~~~ek~~~~  136 (280)
                      ..++++....+.++..++++.|.+.+..+ ..+.|+++++++.+++|||++..
T Consensus        34 ~~~~~~~~~~~~~~~~al~~~p~s~ay~i~~g~~~v~~~l~~~~~~~E~~s~~   86 (110)
T 3b5d_A           34 VGTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLP   86 (110)
T ss_pred             HHHHHHHHHHHHHHHHHHHhCChhhHHHHHhhHHHHHHHHHHHHHhCCCCCHH
Confidence            35556666788999999999999999888 68999999999999999999877

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00