Citrus Sinensis ID: 042038

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------
Protein Sequence
MDTRKLKICCGVTAIFLFIFVILITTLSLTIFKPKQPEITAHPVALENITTGGGYPNVTLNATLRMIVTIDNRNYGSFKYRNTTAHVNYRGGIVADVPIEAALVPARGKINISTSADLMADKLLSSPYVLGDIESGSLNLTSVANLHGEVTMLKFLSLHARAMSTCDFTLWTKTQKVDSNCKSKIKL
Secondary Structure (PSIPRED)
ccccccEEEEHHHHHHHHHHHHHHHEEEEEEEEccccEEEEEEEEEEEEEEccccccEEEEEEEEEEEEEEcccEEEEEEEcEEEEEEEccEEEEEEccccEEEccccEEEEEEEEEEccccccccccccccccccEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEccccEEEccEEEEEEc
Secondary Structure Prediction (SSPRO)
cccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccEEEEEEEEEccccccccccccEEEEEEEEEEEEEcccccEEEEcccEEEEEEcccEEEEEEcccccccccccEEEEEEEEEEcHHHcccccHHHHHHcccEEEEEEEEEccEEEEEEEEEEEEEEEEEEEEEEEEccccEccccccEEcc
Coil and Loop (DISEMBL)
mdtrklkiccgVTAIFLFIFVILITTLsltifkpkqpeitahpvalenittgggypnvtlNATLRMIVTIDnrnygsfkyrnttahvnyrggivadvpieaalvpargkinistSADLMADKLlsspyvlgdiesgslnLTSVANLHGEVTMLKFLSLHARAmstcdftlwtktqkvdsnckskikl
Flexible Loop (DISEMBL)
mdtrklkicCGVTAIFLFIFVILITTLSLTIFKPKQPEITAHPVALENITTGGGYPNVTLNATLRMIVTIDNRNYGSFKYRNTTAHVNYRGGIVADVPIEAALVPARGKINISTSADLMADKLLSSPYVLGDIESGSLNLTSVANLHGEVTMLKFLSLHARAMSTCDFTlwtktqkvdsnckskikl
Low Complexity Region (SEG)
MDTRKLKICCGVtaiflfifvilittlsltifKPKQPEITAHPVALENITTGGGYPNVTLNATLRMIVTIDNRNYGSFKYRNTTAHVNYRGGIVADVPIEAALVPARGKINISTSADLMADKLLSSPYVLGDIESGSLNLTSVANLHGEVTMLKFLSLHARAMSTCDFTLWTKTQKVDSNCKSKIKL
Disordered region (IsUnstruct)
*****LKICCGVTAIFLFIFVILITTLSLTIFKPKQPEITAHPVALENITTGGGYPNVTLNATLRMIVTIDNRNYGSFKYRNTTAHVNYRGGIVADVPIEAALVPARGKINISTSADLMADKLLSSPYVLGDIESGSLNLTSVANLHGEVTMLKFLSLHARAMSTCDFTLWTKTQ************
Disordered Region (DISOPRED)
***RKLKICCGVTAIFLFIFVILITTLSLTIFKPKQPEITAHPVALENITTGGGYPNVTLNATLRMIVTIDNRNYGSFKYRNTTAHVNYRGGIVADVPIEAALVPARGKINISTSADLMADKLLSSPYVLGDIESGSLNLTSVANLHGEVTMLKFLSLHARAMSTCDFTLWTKTQK**SNC*SKIKL
Disordered Region (DISEMBL)
MDTRKLKICCGVTAIFLFIFVILITTLSLTIFKPKQPEITAHPVALENITTGGGYPNVTLNATLRMIVTIDNRNYGSFKYRNTTAHVNYRGGIVADVPIEAALVPARGKINISTSADLMADKLLSSPYVLGDIESGSLNLTSVANLHGEVTMLKFLSLHARAMSTCDFTLWTKTQKVDSNCKSKIKL
Disordered Region (DISPRO)
***RKLKICCGVTAIFLFIFVILITTLSLTIFKPKQPEITAHPVALENITTGGGYPNVTLNATLRMIVTIDNRNYGSFKYRNTTAHVNYRGGIVADVPIEAALVPARGKINISTSADLMADKLLSSPYVLGDIESGSLNLTSVANLHGEVTMLKFLSLHARAMSTCDFTLWTKTQKVDSNCKSKIKL
Transmembrane Helix (TMHMM)
iiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MDTRKLKICCGVTAIFLFIFVILITTLSLTIFKPKQPEITAHPVALENITTGGGYPNVTLNATLRMIVTIDNRNYGSFKYRNTTAHVNYRGGIVADVPIEAALVPARGKINISTSADLMADKLLSSPYVLGDIESGSLNLTSVANLHGEVTMLKFLSLHARAMSTCDFTLWTKTQKVDSNCKSKIKL
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	187
224069022	187	predicted protein [Populus trichocarpa]	0.978	0.978	0.592	3e-58
255577737	189	conserved hypothetical protein [Ricinus	0.962	0.952	0.505	3e-49
356542090	186	PREDICTED: uncharacterized protein LOC10	0.994	1.0	0.518	6e-49
356550014	186	PREDICTED: uncharacterized protein LOC10	0.994	1.0	0.529	8e-49
224113889	192	predicted protein [Populus trichocarpa]	0.967	0.942	0.480	3e-41
356547077	186	PREDICTED: uncharacterized protein LOC10	0.994	1.0	0.449	2e-39
356550012	186	PREDICTED: uncharacterized protein LOC10	0.994	1.0	0.443	3e-38
351726275	184	uncharacterized protein LOC100306568 [Gl	0.983	1.0	0.470	6e-38
255554967	191	conserved hypothetical protein [Ricinus	0.973	0.952	0.432	6e-37
357453465	189	hypothetical protein MTR_2g088610 [Medic	0.973	0.962	0.444	6e-36

>gi|224069022|ref|XP_002302881.1| predicted protein [Populus trichocarpa] gi|222844607|gb|EEE82154.1| predicted protein [Populus trichocarpa]

 Score =  229 bits (584), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 109/184 (59%), Positives = 139/184 (75%), Gaps = 1/184 (0%)

Query: 4   RKLKICCGVTAIFLFIFVILITTLSLTIFKPKQPEITAHPVALENITTGGGYPNVTLNAT 63
           R  KICCGVT IF+ I   + TTL+LT+FKPK P I A+PV LENI  GG  PNVTLN T
Sbjct: 5   RGFKICCGVTTIFIIILAAVFTTLALTVFKPKNPSIIANPVGLENIQFGGS-PNVTLNVT 63

Query: 64  LRMIVTIDNRNYGSFKYRNTTAHVNYRGGIVADVPIEAALVPARGKINISTSADLMADKL 123
           L M+VTIDN NYGSFK+ N+TA+V+Y G IVA+VPI+A L+PA  K+NI+TS DLMAD L
Sbjct: 64  LGMVVTIDNPNYGSFKFTNSTAYVDYHGVIVAEVPIQADLIPAHSKVNITTSVDLMADAL 123

Query: 124 LSSPYVLGDIESGSLNLTSVANLHGEVTMLKFLSLHARAMSTCDFTLWTKTQKVDSNCKS 183
           + +PY L D+ +G  N  S ++LHG+V ++K L LHA A+STCD TL+  +  +DS+CKS
Sbjct: 124 IKNPYFLQDLIAGRFNFVSTSSLHGKVEVIKILKLHATALSTCDITLFVTSLSIDSSCKS 183

Query: 184 KIKL 187
           +IKL
Sbjct: 184 EIKL 187

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255577737|ref|XP_002529744.1| conserved hypothetical protein [Ricinus communis] gi|223530785|gb|EEF32651.1| conserved hypothetical protein [Ricinus communis]

 Score =  200 bits (508), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 93/184 (50%), Positives = 130/184 (70%), Gaps = 4/184 (2%)

Query: 4   RKLKICCGVTAIFLFIFVILITTLSLTIFKPKQPEITAHPVALENITTGGGYPNVTLNAT 63
           R LKI CGVTAIFL I  ++  +L+ TIFKPK P++  HP  LEN+       N+T N T
Sbjct: 10  RGLKIFCGVTAIFLIIVAVVFVSLAFTIFKPKDPQVFLHPSGLENLQLA----NITSNVT 65

Query: 64  LRMIVTIDNRNYGSFKYRNTTAHVNYRGGIVADVPIEAALVPARGKINISTSADLMADKL 123
           + M++TI N NYGSFK+RN+T +VNYRG +V ++P+   LVPAR K NI+TSADLMA K+
Sbjct: 66  MDMVITIGNPNYGSFKFRNSTGYVNYRGDVVGEIPVAEDLVPARSKTNITTSADLMAGKI 125

Query: 124 LSSPYVLGDIESGSLNLTSVANLHGEVTMLKFLSLHARAMSTCDFTLWTKTQKVDSNCKS 183
           +++P   GD   G+LN+T+ A LHG+V++LK  +LHA   +TC  +++  ++ + S CKS
Sbjct: 126 MTNPEFFGDFLLGNLNMTATAVLHGKVSVLKIFNLHATTFTTCYISVFVNSRDIQSTCKS 185

Query: 184 KIKL 187
           KIKL
Sbjct: 186 KIKL 189

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356542090|ref|XP_003539504.1| PREDICTED: uncharacterized protein LOC100800442 [Glycine max]

 Score =  199 bits (505), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 97/187 (51%), Positives = 129/187 (68%), Gaps = 1/187 (0%)

Query: 1   MDTRKLKICCGVTAIFLFIFVILITTLSLTIFKPKQPEITAHPVALENITTGGGYPNVTL 60
           M  R LKIC  V+ +FL I  I+I TL +TIFKPK PEIT HPV LE+       PN+T+
Sbjct: 1   MANRGLKICLAVSLLFLVIVTIMIVTLFMTIFKPKNPEITVHPVGLEDFQFSLS-PNLTI 59

Query: 61  NATLRMIVTIDNRNYGSFKYRNTTAHVNYRGGIVADVPIEAALVPARGKINISTSADLMA 120
           N TL MI+TI N NYGSF+Y+N+T +VN+   +VA+VPIEA LVPARG+IN++TSAD M 
Sbjct: 60  NVTLGMIITIRNPNYGSFEYKNSTGYVNFHDTVVAEVPIEAELVPARGQINVNTSADFMV 119

Query: 121 DKLLSSPYVLGDIESGSLNLTSVANLHGEVTMLKFLSLHARAMSTCDFTLWTKTQKVDSN 180
           +KL++ P  L D+  G+LN TS   L G+  M   + L A + S+CD ++   ++KVD+N
Sbjct: 120 EKLINDPNFLSDVLGGTLNFTSTTALPGKARMFNIIKLKATSYSSCDISVNISSRKVDTN 179

Query: 181 CKSKIKL 187
           C  KIKL
Sbjct: 180 CNYKIKL 186

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356550014|ref|XP_003543385.1| PREDICTED: uncharacterized protein LOC100808471 [Glycine max]

 Score =  198 bits (504), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 99/187 (52%), Positives = 129/187 (68%), Gaps = 1/187 (0%)

Query: 1   MDTRKLKICCGVTAIFLFIFVILITTLSLTIFKPKQPEITAHPVALENITTGGGYPNVTL 60
           M +R LKIC  V+ + L IF I I TL +TIFKPK PEIT HPV LE+  +    PN+TL
Sbjct: 1   MASRGLKICLAVSLLLLIIFTIAIVTLFMTIFKPKNPEITVHPVGLEDFQSSFS-PNLTL 59

Query: 61  NATLRMIVTIDNRNYGSFKYRNTTAHVNYRGGIVADVPIEAALVPARGKINISTSADLMA 120
           N TL MI+TI N NYGSF+Y N+T++V +   +VA+VPIEA LVPAR +IN++TSAD M 
Sbjct: 60  NVTLGMIITIRNPNYGSFQYINSTSYVKFHDTVVAEVPIEAELVPARSQINVNTSADFMV 119

Query: 121 DKLLSSPYVLGDIESGSLNLTSVANLHGEVTMLKFLSLHARAMSTCDFTLWTKTQKVDSN 180
            KL++ P  L D+  G+LN TS   L G+  ML  + L A + STCD ++   ++ VD+N
Sbjct: 120 AKLINDPNFLSDVLGGTLNFTSTIALPGKARMLNIIKLKATSYSTCDISVNISSRNVDTN 179

Query: 181 CKSKIKL 187
           CKSKIKL
Sbjct: 180 CKSKIKL 186

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224113889|ref|XP_002316605.1| predicted protein [Populus trichocarpa] gi|222859670|gb|EEE97217.1| predicted protein [Populus trichocarpa]

 Score =  173 bits (439), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 88/183 (48%), Positives = 123/183 (67%), Gaps = 2/183 (1%)

Query: 6   LKICCGVTAIFLFIFVILITTLSLTIFKPKQPEITAHPVALENITTGGGYPNVTLNATLR 65
           LKIC  VT + L I  +++ TL  T+FKPK+P+I   PV LE+I     +P   LN TL 
Sbjct: 11  LKICVLVTFVLLVIISVVLVTLYFTVFKPKEPKINPQPVILESIR-WIIFPIQMLNITLG 69

Query: 66  MIVTIDNRNYGSFKYRNTTAHVNYRGGIVADVPIEAALVPARGKINISTSADLMADKLLS 125
           M++T++NRNYGSFKY+ +TA+V+YRG +VA+ PIEA  +PARGK NIST+  + ADKLLS
Sbjct: 70  MVITVENRNYGSFKYQESTAYVSYRGNVVAEAPIEADTIPARGKHNISTTVTMFADKLLS 129

Query: 126 SPYVLGDIESGS-LNLTSVANLHGEVTMLKFLSLHARAMSTCDFTLWTKTQKVDSNCKSK 184
                 ++  GS LN TS   LHG+V + K +   A + STCD +++ + Q+ +S CKSK
Sbjct: 130 DDNFKRELLQGSILNFTSATTLHGKVILFKLIKAKATSSSTCDISIFVQEQQTESICKSK 189

Query: 185 IKL 187
           + L
Sbjct: 190 VGL 192

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356547077|ref|XP_003541944.1| PREDICTED: uncharacterized protein LOC100783184 [Glycine max]

 Score =  167 bits (423), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 84/187 (44%), Positives = 118/187 (63%), Gaps = 1/187 (0%)

Query: 1   MDTRKLKICCGVTAIFLFIFVILITTLSLTIFKPKQPEITAHPVALENITTGGGYPNVTL 60
           M  + LK C  V+ +FL I  I+I TL  T+FKPK P IT HP+ LE+       PN+T 
Sbjct: 1   MANKGLKFCLIVSLLFLIIVTIVIVTLFFTVFKPKDPNITVHPIGLEHFDFSL-LPNITA 59

Query: 61  NATLRMIVTIDNRNYGSFKYRNTTAHVNYRGGIVADVPIEAALVPARGKINISTSADLMA 120
           N +L M++TI+N NYGSF++ N+  ++N+   +V +VPI A LVPA G+IN++T A+ M 
Sbjct: 60  NVSLGMVITIENPNYGSFEFTNSIGYINFHDTVVGEVPIGAELVPAHGQINVNTWANFMV 119

Query: 121 DKLLSSPYVLGDIESGSLNLTSVANLHGEVTMLKFLSLHARAMSTCDFTLWTKTQKVDSN 180
            KL+S P    D+ SG+LN TS ++L G   M K   L A A S+C+ +L    + VD+ 
Sbjct: 120 AKLISVPKFWSDVLSGTLNFTSTSSLPGIARMFKIFKLKATAYSSCNISLRIVPRNVDTK 179

Query: 181 CKSKIKL 187
           C SKIKL
Sbjct: 180 CISKIKL 186

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356550012|ref|XP_003543384.1| PREDICTED: uncharacterized protein LOC100807939 [Glycine max]

 Score =  163 bits (412), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 83/187 (44%), Positives = 113/187 (60%), Gaps = 1/187 (0%)

Query: 1   MDTRKLKICCGVTAIFLFIFVILITTLSLTIFKPKQPEITAHPVALENITTGGGYPNVTL 60
           M +R LKIC  ++ +FL I  I+I  L  TIF+PK P I  HPV  EN        NVT 
Sbjct: 1   MASRGLKICLAMSLLFLIIVAIVIVALFFTIFRPKDPNIIVHPVGFENFNPSL-LTNVTA 59

Query: 61  NATLRMIVTIDNRNYGSFKYRNTTAHVNYRGGIVADVPIEAALVPARGKINISTSADLMA 120
           N +L M++TI+N NY +F+Y N T ++ +   +V  VPI   LVP R +IN++TSA+ M 
Sbjct: 60  NVSLGMLITIENSNYENFEYPNATGYIKFHDTVVGQVPIVGELVPPRSQINVNTSANFMV 119

Query: 121 DKLLSSPYVLGDIESGSLNLTSVANLHGEVTMLKFLSLHARAMSTCDFTLWTKTQKVDSN 180
            KL++ P  L D  SG +N TS A+L G+  MLK +   A   S+CD +L   ++ VDS 
Sbjct: 120 AKLINDPNFLSDFLSGIVNFTSTASLPGKAHMLKIIKFKATVYSSCDISLNITSRNVDSK 179

Query: 181 CKSKIKL 187
           C SKIKL
Sbjct: 180 CISKIKL 186

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|351726275|ref|NP_001236865.1| uncharacterized protein LOC100306568 [Glycine max] gi|255628907|gb|ACU14798.1| unknown [Glycine max]

 Score =  162 bits (410), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 88/187 (47%), Positives = 116/187 (62%), Gaps = 3/187 (1%)

Query: 1   MDTRKLKICCGVTAIFLFIFVILITTLSLTIFKPKQPEITAHPVALENITTGGGYPNVTL 60
           M TR LKIC  V+++FL I  I+I TL LTIFKPK P+I  HPV LEN       PN T 
Sbjct: 1   MATRGLKICLAVSSLFLIILAIVIVTLILTIFKPKNPDIFLHPVDLENFQLLS--PNTT- 57

Query: 61  NATLRMIVTIDNRNYGSFKYRNTTAHVNYRGGIVADVPIEAALVPARGKINISTSADLMA 120
           +A L +++TI N NYG+FKY N++ ++ YR  I+A+VP+     PAR   N+ST+  +M 
Sbjct: 58  SAPLGIVITIVNPNYGNFKYVNSSGYLKYRDTIIAEVPLGIRSFPARSTTNVSTTVGIMT 117

Query: 121 DKLLSSPYVLGDIESGSLNLTSVANLHGEVTMLKFLSLHARAMSTCDFTLWTKTQKVDSN 180
           DKL+  P  L DIE G  NLT+ A L G+VTM+K L L A+   +C  +         S+
Sbjct: 118 DKLIQDPKFLSDIEGGVFNLTAEATLPGKVTMIKILRLKAKIYISCGVSFNIIAVDASSS 177

Query: 181 CKSKIKL 187
           C SKIKL
Sbjct: 178 CMSKIKL 184

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255554967|ref|XP_002518521.1| conserved hypothetical protein [Ricinus communis] gi|223542366|gb|EEF43908.1| conserved hypothetical protein [Ricinus communis]

 Score =  159 bits (401), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 80/185 (43%), Positives = 111/185 (60%), Gaps = 3/185 (1%)

Query: 4   RKLKICCGVTAIFLFIFVILITTLSLTIFKPKQPEITAHPVALENITTGGGYPNVTLNAT 63
           R LKICCG+TAI   I  +++  L  T+FKPK+P +    VALENI     +P + LN T
Sbjct: 9   RGLKICCGITAILTVIIAVVLVILYFTVFKPKEPNVITRSVALENIKVA--WPQLFLNIT 66

Query: 64  LRMIVTIDNRNYGSFKYRNTTAHVNYRGGIVADVPIEAALVPARGKINISTSADLMADKL 123
           L + V IDN+NYG FKY N+TA+V+YRG ++ + P+ A  VPAR K + STS  + A+KL
Sbjct: 67  LGVGVIIDNKNYGGFKYSNSTAYVSYRGNVIGEAPVPADTVPARKKHDTSTSVTIFANKL 126

Query: 124 LSSPYVLGD-IESGSLNLTSVANLHGEVTMLKFLSLHARAMSTCDFTLWTKTQKVDSNCK 182
                 L D +  G LN T+ + LHG+ + L    + A   +TCD +L+   Q   S CK
Sbjct: 127 FEDDNFLHDFLIVGILNFTAASTLHGKASFLDLFKVEATIFTTCDISLFVVPQHAQSFCK 186

Query: 183 SKIKL 187
           SK+  
Sbjct: 187 SKVSF 191

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357453465|ref|XP_003597010.1| hypothetical protein MTR_2g088610 [Medicago truncatula] gi|355486058|gb|AES67261.1| hypothetical protein MTR_2g088610 [Medicago truncatula]

 Score =  155 bits (392), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 84/189 (44%), Positives = 116/189 (61%), Gaps = 7/189 (3%)

Query: 1   MDTRKLKICCGVTAIFLFIFVILITTLSLTIFKPKQPEITAHPVALENITTGGGYPNVTL 60
           M  R LKIC  V+ +FL I  I+  TL LTIFKPK P I A+      ++      N+T+
Sbjct: 1   MAKRGLKICLIVSTLFLIIISIVTLTLILTIFKPKDPTIRANFAQFNFLSA-----NITM 55

Query: 61  NATLRMIVTIDNRNYGSFKYRNTTAHVNYRGGIVADVPIEAALVPARGKINISTSADLMA 120
           N TL M++TI N NY  FKY+N+ +++NY   IV +VPIE+ LVPAR +IN++TSADLM 
Sbjct: 56  NMTLGMVITIVNPNYAGFKYQNSISYINYHDTIVGNVPIESQLVPARSEINVTTSADLMV 115

Query: 121 DKLLSSPYVLGDIESGSL--NLTSVANLHGEVTMLKFLSLHARAMSTCDFTLWTKTQKVD 178
            KLL +P    D+    +  N TS   L G+  +LK++ L A    +CD ++   +   D
Sbjct: 116 GKLLQNPQFWKDMVHNRMIINFTSTTELPGKAILLKYIKLKAITYCSCDISVNITSNGAD 175

Query: 179 SNCKSKIKL 187
           SNCKS+IKL
Sbjct: 176 SNCKSRIKL 184

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	187
TAIR|locus:2080320	235	AT3G54200 "AT3G54200" [Arabido	0.978	0.778	0.287	1.4e-18
TAIR|locus:2062917	221	AT2G46150 "AT2G46150" [Arabido	0.807	0.683	0.3	8.2e-12
TAIR|locus:504955821	189	AT3G05975 "AT3G05975" [Arabido	0.978	0.968	0.245	8.2e-12
TAIR|locus:1006230721	214	AT1G64065 "AT1G64065" [Arabido	0.631	0.551	0.3	1.2e-10
TAIR|locus:2142040	215	AT4G13270 "AT4G13270" [Arabido	0.796	0.693	0.209	5.7e-08
TAIR|locus:2051774	209	AT2G44000 "AT2G44000" [Arabido	0.481	0.430	0.318	2.6e-05
TAIR|locus:2128464	228	AT4G23610 "AT4G23610" [Arabido	0.893	0.732	0.197	3.4e-05

TAIR|locus:2080320 AT3G54200 "AT3G54200" [Arabidopsis thaliana (taxid:3702)]

 Score = 224 (83.9 bits), Expect = 1.4e-18, P = 1.4e-18
 Identities = 54/188 (28%), Positives = 92/188 (48%)

Query:     4 RKLKICCGVXXXXXXXXXXXXXXXXXXXXKPKQPEITAHPVALENITTGGGYP---NVTL 60
             R  KIC                       KPK+P  T   V ++ +      P    V L
Sbjct:    49 RNCKICICFTILLILLIAIVIVILAFTLFKPKRPTTTIDSVTVDRLQASVN-PLLLKVLL 107

Query:    61 NATLRMIVTIDNRNYGSFKYRNTTAHVNYRGGIVADVPIEAALVPARGKINISTSADLMA 120
             N TL + +++ N N   F Y +++A +NYRG ++ + P+ A  + AR  + ++ +  LMA
Sbjct:   108 NLTLNVDLSLKNPNRIGFSYDSSSALLNYRGQVIGEAPLPANRIAARKTVPLNITLTLMA 167

Query:   121 DKLLSSPYVLGDIESGSLNLTSVANLHGEVTMLKFLSLHARAMSTCDFTLWTKTQKVDS- 179
             D+LLS   +L D+ +G + L +   + G+VT+LK   +  ++ S+CD ++    + V S 
Sbjct:   168 DRLLSETQLLSDVMAGVIPLNTFVKVTGKVTVLKIFKIKVQSSSSCDLSISVSDRNVTSQ 227

Query:   180 NCKSKIKL 187
             +CK   KL
Sbjct:   228 HCKYSTKL 235

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0046658 "anchored to plasma membrane" evidence=IDA

GO:0005886 "plasma membrane" evidence=IDA

GO:0009506 "plasmodesma" evidence=IDA

TAIR|locus:2062917 AT2G46150 "AT2G46150" [Arabidopsis thaliana (taxid:3702)]

 Score = 160 (61.4 bits), Expect = 8.2e-12, P = 8.2e-12
 Identities = 48/160 (30%), Positives = 79/160 (49%)

Query:    35 KQPEITAHPVALENITTGGGYPNVTLNAT-LRMIV--TIDNRNYGSFKYRNTTAHVNYRG 91
             K P I  + V +  + +  G   V L  T + MIV  ++ N N  SFKY NTT  + Y+G
Sbjct:    64 KDPIIKMNGVMVNGLDSVTGTNQVQLLGTNISMIVDVSVKNPNTASFKYSNTTTDIYYKG 123

Query:    92 GIVADVP-IEAALVPAR-GKINISTSADLMADKLLSSPYVLGDIE-SGSLNLTSVANLHG 148
              +V +   +     P R  ++N++   D+M D++LS P +  +I  SG +N+ S   + G
Sbjct:   124 TLVGEAHGLPGKARPHRTSRMNVTV--DIMLDRILSDPGLGREISRSGLVNVWSYTRVGG 181

Query:   149 EVTMLKFLSLHARAMSTCDFTLWTKTQKV-DSNCKSKIKL 187
             +V ++  +  H      C   +    Q + D +CK KI L
Sbjct:   182 KVKIMGIVKKHVTVKMNCTMAVNITGQAIQDVDCKKKIDL 221

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0005886 "plasma membrane" evidence=IDA

TAIR|locus:504955821 AT3G05975 "AT3G05975" [Arabidopsis thaliana (taxid:3702)]

 Score = 160 (61.4 bits), Expect = 8.2e-12, P = 8.2e-12
 Identities = 46/187 (24%), Positives = 84/187 (44%)

Query:     5 KLKICCGVXXXXXXXXXXXXXXXXXXXX-KPKQPEITAHPVALENITTGGGYP-NVTLNA 62
             K +ICC V                     KPK P +      ++ I+T    P  V LN 
Sbjct:     3 KRRICCIVSGIIFVLFVIFMTALILAQVFKPKHPILQTVSSTVDGISTNISLPYEVQLNF 62

Query:    63 TLRMIVTIDNRNYGSFKYRNTTAHVNYRGGIVADVPIEAALVPARGKINISTSADLMADK 122
             TL + + + N N   F+Y+     V YR  +V ++ + ++ +PA+G + +     L  DK
Sbjct:    63 TLTLEMLLKNPNVADFEYKTVENLVYYRDTLVGNLTLPSSTLPAKGSVLLPCPLFLQLDK 122

Query:   123 LLSS-PYVLGDIESGSLNLTSVANLHGEVTMLKFLSLHARAMSTCDFTLWTKTQKV-DSN 180
              +++   ++ D+  G + + + A + G++T+L    +   ++S C+  L   +  V D  
Sbjct:   123 FVANLGDIVQDVLHGKIVMETRAKMPGKITLLGIFKIPLDSISHCNLVLGFPSMVVEDQV 182

Query:   181 CKSKIKL 187
             C  K KL
Sbjct:   183 CDLKTKL 189

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:1006230721 AT1G64065 "AT1G64065" [Arabidopsis thaliana (taxid:3702)]

 Score = 149 (57.5 bits), Expect = 1.2e-10, P = 1.2e-10
 Identities = 36/120 (30%), Positives = 64/120 (53%)

Query:    36 QPEITAHPVALENITTGGGYPNVTLNATLRMIVTIDNRNYGSFKYRNTTAHVNYRG-GIV 94
             +PEI    ++  ++ +GG   N   NATL   ++I N N+G+F++ ++T  V Y   G+V
Sbjct:    66 KPEIETRSISTRDLRSGGNSTNPYFNATLVSDISIRNSNFGAFEFEDSTLRVVYADHGVV 125

Query:    95 ADVPIEAALVPARGKINIS-TSADLMADKLLSSPYVLGDIESGSLNLTSVANLHGEVTML 153
              +  IE   V A   + I+    ++ + +LL +  +  D+  G L L SVA + G + +L
Sbjct:   126 GETKIEGRRVEAHKTVRITGVVVEIGSFRLLDTKDLDKDLRLGFLELRSVAEVRGRIKVL 185

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0016020 "membrane" evidence=ISS

TAIR|locus:2142040 AT4G13270 "AT4G13270" [Arabidopsis thaliana (taxid:3702)]

 Score = 125 (49.1 bits), Expect = 5.7e-08, P = 5.7e-08
 Identities = 32/153 (20%), Positives = 73/153 (47%)

Query:    34 PKQPEITAHPVALENITTGGGYPNVTLNATLRMIVTIDNRNYGSFKYRNTTAHVNYRGGI 93
             P  P+IT   + L +I+    +  + L+ +  + + + NR++ S  Y +    + YRG  
Sbjct:    65 PSDPDITVSRINLNHISVVDSH-KIALDLSFSLTIKVRNRDFFSLDYDSLVVSIGYRGRE 123

Query:    94 VADVPIEAALVPARGKINISTSADLMADKLLSSP-YVLGDIESGSLNLTSVANLHGEVTM 152
             +  V  +   + AR    I  + +L   +++    Y++GD+  G +   ++A + G++ +
Sbjct:   124 LGLVKSKGGHLKARDSSYIDATLELDGLEVVHDVIYLIGDLAKGVIPFDTIAQVQGDLGV 183

Query:   153 LKFLSLHARAMSTCDFTLWTKTQKVD-SNCKSK 184
             L F ++  +   +C+  +    QK+   +C  K
Sbjct:   184 LLF-NIPIQGKVSCEVYVNVNNQKISHQDCHRK 215

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0000902 "cell morphogenesis" evidence=RCA

GO:0016049 "cell growth" evidence=RCA

GO:0048193 "Golgi vesicle transport" evidence=RCA

TAIR|locus:2051774 AT2G44000 "AT2G44000" [Arabidopsis thaliana (taxid:3702)]

 Score = 112 (44.5 bits), Expect = 2.6e-05, P = 2.6e-05
 Identities = 29/91 (31%), Positives = 46/91 (50%)

Query:    61 NATLRMIVTIDNRNYGSFKYRNTTAHVNYRGGIVADVPIEAALVPARGKINISTSADLMA 120
             NATL M + I+N N G F++  +   + Y G +V ++ I    V + G +    SA++  
Sbjct:    88 NATLAMEIRIENPNLGFFEFPTSRGEILYNGDVVGEMRINGQRVASFGDLRTEVSAEVAY 147

Query:   121 DKLLSSP-YVLGDIESGSLNLTSVANLHGEV 150
                  SP ++  DIE   + L + A L GEV
Sbjct:   148 RGNQKSPVWLKNDIERRLIILETRAKLRGEV 178

GO:0003674 "molecular_function" evidence=ND

GO:0005739 "mitochondrion" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2128464 AT4G23610 "AT4G23610" [Arabidopsis thaliana (taxid:3702)]

 Score = 112 (44.5 bits), Expect = 3.4e-05, P = 3.4e-05
 Identities = 34/172 (19%), Positives = 67/172 (38%)

Query:     5 KLKICCGVXXXXXXXXXXXXXXXXXXXXKPKQPEITAHPVAL-ENITTGGGYPNVTLNAT 63
             KL +CCG                         P +T   ++  +      G  N   N T
Sbjct:    47 KLILCCGFIASLTMLIAVTFIVLSLTVFHLHSPNLTVDSISFNQRFDFVNGKVNTNQNTT 106

Query:    64 LRMIVTIDNRNYGSFKYRNTTAHVNYRGG--IVADVPIEAALVPARGKINISTSADLMAD 121
             + + +++ N N   F  +N      Y G   +V +    +  +PA+  + ++ +A+++  
Sbjct:   107 VSVEISLHNPNPALFIVKNVNVSF-YHGELVVVGESIRRSETIPAKRTVKMNLTAEIVKT 165

Query:   122 KLLSS-PYVLGDIESGSLNLTSVANLHGEVTMLKFLSLHARAMSTCDFTLWT 172
             KLL+S P ++ D+    ++L S   + G V  +K         + C   + T
Sbjct:   166 KLLASLPGLMEDLNGRGVDLKSSVEVRGRVKKMKIFRKTVHLQTDCFMKMTT 217


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.317   0.132   0.384    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      187       167   0.00075  108 3  11 22  0.39    32
                                                     30  0.46    34


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  7
  No. of states in DFA:  581 (62 KB)
  Total size of DFA:  140 KB (2087 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  13.96u 0.13s 14.09t   Elapsed:  00:00:01
  Total cpu time:  13.96u 0.13s 14.09t   Elapsed:  00:00:01
  Start:  Mon May 20 18:59:23 2013   End:  Mon May 20 18:59:24 2013

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	187
PLN03160	219	PLN03160, PLN03160, uncharacterized protein; Provi	3e-22

>gnl|CDD|215609 PLN03160, PLN03160, uncharacterized protein; Provisional

 Score = 89.0 bits (221), Expect = 3e-22
 Identities = 60/183 (32%), Positives = 85/183 (46%), Gaps = 6/183 (3%)

Query: 9   CCGVTAIFLFIFVILITTLSLTIFKPKQPEITAHPVA---LENITTGGGYPNVTLNATLR 65
           CCG     L I    I  L  T+F+ K P I  + V    LE I      P    N TL 
Sbjct: 39  CCGCITATLLILATTILVLVFTVFRVKDPVIKMNGVTVTKLELINNTTLRPGT--NITLI 96

Query: 66  MIVTIDNRNYGSFKYRNTTAHVNYRGGIVADVPIEAALVPARGKINISTSADLMADKLLS 125
             V++ N N  SFKY NTT  + Y G +V +         AR  + ++ + D++ DK+LS
Sbjct: 97  ADVSVKNPNVASFKYSNTTTTIYYGGTVVGEARTPPGKAKARRTMRMNVTVDIIPDKILS 156

Query: 126 SPYVLGDIESGSLNLTSVANLHGEVTMLKFLSLHARAMSTCDFTLWTKTQKV-DSNCKSK 184
            P +L DI SG LN+ S   + G+V +LK +  H      C  T+   +Q +    CK  
Sbjct: 157 VPGLLTDISSGLLNMNSYTRIGGKVKILKIIKKHVVVKMNCTMTVNITSQAIQGQKCKRH 216

Query: 185 IKL 187
           + L
Sbjct: 217 VDL 219

Length = 219

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	187
PLN03160	219	uncharacterized protein; Provisional	100.0
PF03168	101	LEA_2: Late embryogenesis abundant protein; InterP	99.56
smart00769	100	WHy Water Stress and Hypersensitive response.	98.98
PF07092	238	DUF1356: Protein of unknown function (DUF1356); In	98.58
COG5608	161	LEA14-like dessication related protein [Defense me	97.63
PF12751	387	Vac7: Vacuolar segregation subunit 7; InterPro: IP	96.93
PLN03160	219	uncharacterized protein; Provisional	91.85
PRK10893	192	lipopolysaccharide exporter periplasmic protein; P	87.34
PF11906	149	DUF3426: Protein of unknown function (DUF3426); In	83.92

>PLN03160 uncharacterized protein; Provisional

Probab=100.00  E-value=6e-48  Score=309.58  Aligned_cols=186  Identities=31%  Similarity=0.501  Sum_probs=174.3

Q ss_pred             CcccceEeehHHHHHHHHHHHHHHheeeEEeecCCCeEEEEeEEeceEEeeC-CCCceeEeEEEEEEEEEECCCeEeEEE
Q 042038            2 DTRKLKICCGVTAIFLFIFVILITTLSLTIFKPKQPEITAHPVALENITTGG-GYPNVTLNATLRMIVTIDNRNYGSFKY   80 (187)
Q Consensus         2 ~~r~~~~C~~~~~~~~vll~~~~~il~~lv~rP~~P~~~v~~~~l~~~~~~~-~~~~~~ln~~l~~~v~v~NPN~~~i~y   80 (187)
                      |||+|.+||+|++++++++++++++++|++||||+|+|+++++++++|+++. +.++..+|++++++++++|||+++|+|
T Consensus        32 ~r~~~~~c~~~~~a~~l~l~~v~~~l~~~vfrPk~P~~~v~~v~l~~~~~~~~~~~~~~~n~tl~~~v~v~NPN~~~~~Y  111 (219)
T PLN03160         32 RRRNCIKCCGCITATLLILATTILVLVFTVFRVKDPVIKMNGVTVTKLELINNTTLRPGTNITLIADVSVKNPNVASFKY  111 (219)
T ss_pred             ccccceEEHHHHHHHHHHHHHHHHheeeEEEEccCCeEEEEEEEEeeeeeccCCCCceeEEEEEEEEEEEECCCceeEEE
Confidence            6788888999998888888888999999999999999999999999999875 234678999999999999999999999


Q ss_pred             eCeEEEEEECCeEEEeEEecCceecCCceeEEEEEEEEeeeeeccCccccccccCCeEEEEEEEEEEEEEEEeEEEeeeE
Q 042038           81 RNTTAHVNYRGGIVADVPIEAALVPARGKINISTSADLMADKLLSSPYVLGDIESGSLNLTSVANLHGEVTMLKFLSLHA  160 (187)
Q Consensus        81 ~~~~~~v~Y~g~~lg~~~~p~f~q~~~~t~~i~~~~~~~~~~v~~~~~l~~d~~~g~v~l~~~~~v~~rv~~~~~~~~~~  160 (187)
                      ++++++++|+|+.+|++.+|+|+|++|+++.+++++.+.++++.++++|.+|.++|.++|+++++++||+++++++++++
T Consensus       112 ~~~~~~v~Y~g~~vG~a~~p~g~~~ar~T~~l~~tv~~~~~~~~~~~~L~~D~~~G~v~l~~~~~v~gkVkv~~i~k~~v  191 (219)
T PLN03160        112 SNTTTTIYYGGTVVGEARTPPGKAKARRTMRMNVTVDIIPDKILSVPGLLTDISSGLLNMNSYTRIGGKVKILKIIKKHV  191 (219)
T ss_pred             cCeEEEEEECCEEEEEEEcCCcccCCCCeEEEEEEEEEEeceeccchhHHHHhhCCeEEEEEEEEEEEEEEEEEEEEEEE
Confidence            99999999999999999999999999999999999998888877678899999999999999999999999999999999


Q ss_pred             EEEEEeEEEEEcccceee-ccccceecC
Q 042038          161 RAMSTCDFTLWTKTQKVD-SNCKSKIKL  187 (187)
Q Consensus       161 ~~~v~C~i~v~~~~~~v~-~~C~~~~k~  187 (187)
                      +++++|++.++..++.++ ++|+.++|+
T Consensus       192 ~~~v~C~v~V~~~~~~i~~~~C~~~~~~  219 (219)
T PLN03160        192 VVKMNCTMTVNITSQAIQGQKCKRHVDL  219 (219)
T ss_pred             EEEEEeEEEEECCCCEEeccEecccccC
Confidence            999999999999999999 999999885

>PF03168 LEA_2: Late embryogenesis abundant protein; InterPro: IPR004864 Different types of LEA proteins are expressed at different stages of late embryogenesis in higher plant seed embryos and under conditions of dehydration stress [, ]

Probab=99.56  E-value=1.3e-14  Score=102.04  Aligned_cols=98  Identities=15%  Similarity=0.246  Sum_probs=73.8

Q ss_pred             EEEEECCCeEeEEEeCeEEEEEECCeEEE-eEEecCceecCCceeEEEEEEEEeeeeeccCccccccccCCeEEEEEEEE
Q 042038           67 IVTIDNRNYGSFKYRNTTAHVNYRGGIVA-DVPIEAALVPARGKINISTSADLMADKLLSSPYVLGDIESGSLNLTSVAN  145 (187)
Q Consensus        67 ~v~v~NPN~~~i~y~~~~~~v~Y~g~~lg-~~~~p~f~q~~~~t~~i~~~~~~~~~~v~~~~~l~~d~~~g~v~l~~~~~  145 (187)
                      +++++|||.++++|++.+++++|+|+.+| ....++|+|++++++.+.+++.++...+.  ..+.++. +|..++++..+
T Consensus         1 ~l~v~NPN~~~i~~~~~~~~v~~~g~~v~~~~~~~~~~i~~~~~~~v~~~v~~~~~~l~--~~l~~~~-~~~~~~~v~~~   77 (101)
T PF03168_consen    1 TLSVRNPNSFGIRYDSIEYDVYYNGQRVGTGGSLPPFTIPARSSTTVPVPVSVDYSDLP--RLLKDLL-AGRVPFDVTYR   77 (101)
T ss_dssp             EEEEEESSSS-EEEEEEEEEEEESSSEEEEEEECE-EEESSSCEEEEEEEEEEEHHHHH--HHHHHHH-HTTSCEEEEEE
T ss_pred             CEEEECCCceeEEEeCEEEEEEECCEEEECccccCCeEECCCCcEEEEEEEEEcHHHHH--HHHHhhh-ccccceEEEEE
Confidence            57999999999999999999999999999 78899999999999999888877765542  3455555 66777888888


Q ss_pred             EEEEEEE-eEEEeeeEEEEEEeE
Q 042038          146 LHGEVTM-LKFLSLHARAMSTCD  167 (187)
Q Consensus       146 v~~rv~~-~~~~~~~~~~~v~C~  167 (187)
                      ++|++++ ......+.+..++|+
T Consensus        78 ~~g~~~v~~~~~~~~~~v~~~~~  100 (101)
T PF03168_consen   78 IRGTFKVLGTPIFGSVRVPVSCE  100 (101)
T ss_dssp             EEEEEE-EE-TTTSCEEEEEEEE
T ss_pred             EEEEEEEcccceeeeEEEeEEeE
Confidence            9999985 333333344445553

The function of these proteins is unknown. ; PDB: 3BUT_A 1XO8_A 1YYC_A.

>smart00769 WHy Water Stress and Hypersensitive response

Probab=98.98  E-value=7.4e-09  Score=73.32  Aligned_cols=86  Identities=13%  Similarity=0.132  Sum_probs=68.2

Q ss_pred             ceeEeEEEEEEEEEECCCeEeEEEeCeEEEEEECCeEEEeEEec-CceecCCceeEEEEEEEEeeeeeccCccccccccC
Q 042038           57 NVTLNATLRMIVTIDNRNYGSFKYRNTTAHVNYRGGIVADVPIE-AALVPARGKINISTSADLMADKLLSSPYVLGDIES  135 (187)
Q Consensus        57 ~~~ln~~l~~~v~v~NPN~~~i~y~~~~~~v~Y~g~~lg~~~~p-~f~q~~~~t~~i~~~~~~~~~~v~~~~~l~~d~~~  135 (187)
                      ...++.++.+++.++|||.+.+.|++++..++|+|..+|++..+ ++.+++++++.+++++.+. ....  ..+..++.+
T Consensus        10 ~~~~~~~~~l~l~v~NPN~~~l~~~~~~y~l~~~g~~v~~g~~~~~~~ipa~~~~~v~v~~~~~-~~~~--~~~~~~l~~   86 (100)
T smart00769       10 VSGLEIEIVLKVKVQNPNPFPIPVNGLSYDLYLNGVELGSGEIPDSGTLPGNGRTVLDVPVTVN-LFLA--EALIWHIAN   86 (100)
T ss_pred             ccceEEEEEEEEEEECCCCCccccccEEEEEEECCEEEEEEEcCCCcEECCCCcEEEEEEEEee-hhHh--HHHHHhhcc
Confidence            34688999999999999999999999999999999999999996 7999999999999988873 2221  345556655


Q ss_pred             Ce-EEEEEEEE
Q 042038          136 GS-LNLTSVAN  145 (187)
Q Consensus       136 g~-v~l~~~~~  145 (187)
                      |. ++++++++
T Consensus        87 ~~~~~y~l~g~   97 (100)
T smart00769       87 GEEIPYRLDGK   97 (100)
T ss_pred             CCCccEEEEEE
Confidence            53 55544433

>PF07092 DUF1356: Protein of unknown function (DUF1356); InterPro: IPR009790 This family consists of several hypothetical mammalian proteins of around 250 residues in length

Probab=98.58  E-value=2.2e-06  Score=69.17  Aligned_cols=91  Identities=12%  Similarity=0.155  Sum_probs=69.6

Q ss_pred             HHHheeeEEeecCCCeEEEEeEEeceEEeeCCCCceeEeEEEEEEEEEECCCeEeEEEeCeEEEEEECCeEEEeEEecCc
Q 042038           23 LITTLSLTIFKPKQPEITAHPVALENITTGGGYPNVTLNATLRMIVTIDNRNYGSFKYRNTTAHVNYRGGIVADVPIEAA  102 (187)
Q Consensus        23 ~~~il~~lv~rP~~P~~~v~~~~l~~~~~~~~~~~~~ln~~l~~~v~v~NPN~~~i~y~~~~~~v~Y~g~~lg~~~~p~f  102 (187)
                      ..++++||+  ||.-.++-.++......++.  ...+...++.-.+++.|||++.+.-.+.++++.|....+|.+.....
T Consensus        89 ~~L~iFFLf--PRsV~v~~~gv~s~~V~f~~--~~~~v~l~itn~lNIsN~NFy~V~Vt~~s~qv~~~~~VVG~~~~~~~  164 (238)
T PF07092_consen   89 SGLVIFFLF--PRSVTVSPVGVKSVTVSFNP--DKSTVQLNITNTLNISNPNFYPVTVTNLSIQVLYMKTVVGKGKNSNI  164 (238)
T ss_pred             HHheEEEEe--CcEEEEecCcEEEEEEEEeC--CCCEEEEEEEEEEEccCCCEEEEEEEeEEEEEEEEEeEEeeeEecce
Confidence            344455555  98776666665555555553  34567778888999999999999999999999999999999987655


Q ss_pred             -eecCCceeEEEEEEE
Q 042038          103 -LVPARGKINISTSAD  117 (187)
Q Consensus       103 -~q~~~~t~~i~~~~~  117 (187)
                       .++|++.+.+..++.
T Consensus       165 ~~I~Prs~~q~~~tV~  180 (238)
T PF07092_consen  165 TVIGPRSSKQVNYTVK  180 (238)
T ss_pred             EEecccCCceEEEEee
Confidence             688888888777654

The function of this family is unknown.

>COG5608 LEA14-like dessication related protein [Defense mechanisms]

Probab=97.63  E-value=0.0078  Score=45.49  Aligned_cols=109  Identities=16%  Similarity=0.179  Sum_probs=74.9

Q ss_pred             cCCCeEEEEeEEeceEEeeCCCCceeEeEEEEEEEEEECCCeEeEEEeCeEEEEEECCeEEEeEEe-cCceecCCceeEE
Q 042038           34 PKQPEITAHPVALENITTGGGYPNVTLNATLRMIVTIDNRNYGSFKYRNTTAHVNYRGGIVADVPI-EAALVPARGKINI  112 (187)
Q Consensus        34 P~~P~~~v~~~~l~~~~~~~~~~~~~ln~~l~~~v~v~NPN~~~i~y~~~~~~v~Y~g~~lg~~~~-p~f~q~~~~t~~i  112 (187)
                      .+.|.+.--.+..-...        .....+-.++.++|||-+.+--.+.+..++-+|..+|.+.. .++..+|++..++
T Consensus        30 ~~~p~ve~~ka~wGkvt--------~s~~EiV~t~KiyNPN~fPipVtgl~y~vymN~Iki~eG~~~k~~~v~p~S~~tv  101 (161)
T COG5608          30 VKKPGVESMKAKWGKVT--------NSETEIVGTLKIYNPNPFPIPVTGLQYAVYMNDIKIGEGEILKGTTVPPNSRETV  101 (161)
T ss_pred             cCCCCceEEEEEEEEEe--------ccceEEEEEEEecCCCCcceeeeceEEEEEEcceEeeccccccceEECCCCeEEE
Confidence            35666655555444332        23456777899999999999999999999999999999886 6689999999999


Q ss_pred             EEEEEEeeeeeccCccccccccCCeE-EEEEEEEEEEEEEEeE
Q 042038          113 STSADLMADKLLSSPYVLGDIESGSL-NLTSVANLHGEVTMLK  154 (187)
Q Consensus       113 ~~~~~~~~~~v~~~~~l~~d~~~g~v-~l~~~~~v~~rv~~~~  154 (187)
                      .+++.++-.+.-  ..+...+.+|+= +.  +.++.+.+++++
T Consensus       102 dv~l~~d~~~~k--e~w~~hi~ngErs~I--r~~i~~~v~vg~  140 (161)
T COG5608         102 DVPLRLDNSKIK--EWWVTHIENGERSTI--RVRIKGVVKVGG  140 (161)
T ss_pred             EEEEEEehHHHH--HHHHHHhhccCcccE--EEEEEEEEEEcc
Confidence            988877754432  223345666642 22  233444455444

>PF12751 Vac7: Vacuolar segregation subunit 7; InterPro: IPR024260 Vac7 is localised at the vacuole membrane, a location which is consistent with its involvement in vacuole morphology and inheritance []

Probab=96.93  E-value=0.0032  Score=54.26  Aligned_cols=36  Identities=11%  Similarity=0.091  Sum_probs=30.0

Q ss_pred             EeEEEEEEEEEECCCeEeEEEeCeEEEEEECCeEEE
Q 042038           60 LNATLRMIVTIDNRNYGSFKYRNTTAHVNYRGGIVA   95 (187)
Q Consensus        60 ln~~l~~~v~v~NPN~~~i~y~~~~~~v~Y~g~~lg   95 (187)
                      -..-|+++|.+.|||.+.|.-+++++++|-+-..+|
T Consensus       346 qELmfdl~V~A~NPn~~~V~I~d~dldIFAKS~yvg  381 (387)
T PF12751_consen  346 QELMFDLTVEAFNPNWFTVTIDDMDLDIFAKSRYVG  381 (387)
T ss_pred             ceEEEeeEEEEECCCeEEEEeccceeeeEecCCccC
Confidence            445677889999999999999999999987665554

Vac7 has been shown to function as an upstream regulator of the Fab1 lipid kinase pathway []. The Fab1 lipid pathway is important for correct regulation of membrane trafficking events.

>PLN03160 uncharacterized protein; Provisional

Probab=91.85  E-value=0.34  Score=39.03  Aligned_cols=30  Identities=20%  Similarity=0.363  Sum_probs=17.9

Q ss_pred             cccceEeehHHHHHHHHHHHHHHheeeEEe
Q 042038            3 TRKLKICCGVTAIFLFIFVILITTLSLTIF   32 (187)
Q Consensus         3 ~r~~~~C~~~~~~~~vll~~~~~il~~lv~   32 (187)
                      +++.+.|+.||.+++.++.++++++..++|
T Consensus        30 ~~~r~~~~~c~~~~~a~~l~l~~v~~~l~~   59 (219)
T PLN03160         30 KTRRRNCIKCCGCITATLLILATTILVLVF   59 (219)
T ss_pred             ccccccceEEHHHHHHHHHHHHHHHHheee
Confidence            345555666666666666666666655554

>PRK10893 lipopolysaccharide exporter periplasmic protein; Provisional

Probab=87.34  E-value=12  Score=29.46  Aligned_cols=20  Identities=5%  Similarity=0.052  Sum_probs=16.9

Q ss_pred             ecCCCeEEEEeEEeceEEee
Q 042038           33 KPKQPEITAHPVALENITTG   52 (187)
Q Consensus        33 rP~~P~~~v~~~~l~~~~~~   52 (187)
                      .++.|.|.+++++...|+.+
T Consensus        37 ~~~~Pdy~~~~~~~~~yd~~   56 (192)
T PRK10893         37 NNNDPTYQSQHTDTVVYNPE   56 (192)
T ss_pred             CCCCCCEEEeccEEEEECCC
Confidence            46789999999999888865

>PF11906 DUF3426: Protein of unknown function (DUF3426); InterPro: IPR021834 This family of proteins are functionally uncharacterised

Probab=83.92  E-value=13  Score=27.59  Aligned_cols=76  Identities=13%  Similarity=0.005  Sum_probs=48.8

Q ss_pred             EEEEeEEeceEEeeCCCCceeEeEEEEEEEEEECCCeEeEEEeCeEEEEE-ECCeEEEeEEe-c----------CceecC
Q 042038           39 ITAHPVALENITTGGGYPNVTLNATLRMIVTIDNRNYGSFKYRNTTAHVN-YRGGIVADVPI-E----------AALVPA  106 (187)
Q Consensus        39 ~~v~~~~l~~~~~~~~~~~~~ln~~l~~~v~v~NPN~~~i~y~~~~~~v~-Y~g~~lg~~~~-p----------~f~q~~  106 (187)
                      -.++.+++++..+..   ...-+-.+.++.+++|.......|-..+++++ -+|+.+++-.+ |          ....++
T Consensus        48 ~~~~~l~i~~~~~~~---~~~~~~~l~v~g~i~N~~~~~~~~P~l~l~L~D~~g~~l~~r~~~P~~yl~~~~~~~~~l~p  124 (149)
T PF11906_consen   48 RDIDALKIESSDLRP---VPDGPGVLVVSGTIRNRADFPQALPALELSLLDAQGQPLARRVFTPADYLPPGLAAQAGLPP  124 (149)
T ss_pred             cCcceEEEeeeeEEe---ecCCCCEEEEEEEEEeCCCCcccCceEEEEEECCCCCEEEEEEEChHHhcccccccccccCC
Confidence            344555554444332   11223445667789999999999999999988 67888887766 4          234666


Q ss_pred             CceeEEEEEEE
Q 042038          107 RGKINISTSAD  117 (187)
Q Consensus       107 ~~t~~i~~~~~  117 (187)
                      +++..+.+.+.
T Consensus       125 g~~~~~~~~~~  135 (149)
T PF11906_consen  125 GESVPFRLRLE  135 (149)
T ss_pred             CCeEEEEEEee
Confidence            66666555443

This protein is found in bacteria. Proteins in this family are typically between 262 to 463 amino acids in length.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	187
1yyc_A	174	LEA protein, putative late embryogenesis abundant	98.84
1xo8_A	151	AT1G01470; structural genomics, protein structure	98.58
3but_A	136	Uncharacterized protein AF_0446; lipid binding pro	98.19

>1yyc_A LEA protein, putative late embryogenesis abundant protein; structural genomics, protein structure initiative, CESG; NMR {Arabidopsis thaliana}

Probab=98.84  E-value=1.9e-08  Score=77.04  Aligned_cols=103  Identities=13%  Similarity=0.106  Sum_probs=82.4

Q ss_pred             CCCeEEEEeEEeceEEeeCCCCceeEeEEEEEEEEEECCCeEeEEEeCeEEEEEECCeEEEeEEecC-ceecCCceeEEE
Q 042038           35 KQPEITAHPVALENITTGGGYPNVTLNATLRMIVTIDNRNYGSFKYRNTTAHVNYRGGIVADVPIEA-ALVPARGKINIS  113 (187)
Q Consensus        35 ~~P~~~v~~~~l~~~~~~~~~~~~~ln~~l~~~v~v~NPN~~~i~y~~~~~~v~Y~g~~lg~~~~p~-f~q~~~~t~~i~  113 (187)
                      +.|++++.++++.+++..        ..++.+.++++|||...+.+...+.++.-+|..++++..+. +.+++++++.+.
T Consensus        43 ~~PeV~v~~v~~~~~~l~--------~~~~~l~LrV~NPN~~pLpi~gi~Y~L~vnG~~lasG~s~~~~tIpa~g~~~v~  114 (174)
T 1yyc_A           43 PTPEATVDDVDFKGVTRD--------GVDYHAKVSVKNPYSQSIPICQISYILKSATRTIASGTIPDPGSLVGSGTTVLD  114 (174)
T ss_dssp             CCCEEEEEEEEEEEECSS--------SEEEEEEEEEEECSSSCCBCCSEEEEEEESSSCEEEEEESCCCBCCSSEEEEEE
T ss_pred             CCCEEEEEEeEEeccccc--------eEEEEEEEEEECCCCCCccccceEEEEEECCEEEEEEecCCCceECCCCcEEEE
Confidence            679999999999877653        36677889999999999999999999999999999999865 799999999999


Q ss_pred             EEEEEeeeeeccCcccccccc-CCeEEEEEEEEEEE
Q 042038          114 TSADLMADKLLSSPYVLGDIE-SGSLNLTSVANLHG  148 (187)
Q Consensus       114 ~~~~~~~~~v~~~~~l~~d~~-~g~v~l~~~~~v~~  148 (187)
                      +++.+....+   ..+.+|+. .+.++.++++++.+
T Consensus       115 Vpv~v~~~~l---~~~~~~l~~~~~i~Y~L~g~L~i  147 (174)
T 1yyc_A          115 VPVKVAYSIA---VSLMKDMCTDWDIDYQLDIGLTF  147 (174)
T ss_dssp             EEEEESHHHH---HHTCCCCCSSEEECEEEEEEEEE
T ss_pred             EEEEEEHHHH---HHHHHhcCCCCccceEEEEEEEe
Confidence            9988875433   23445553 45677776655443

>1xo8_A AT1G01470; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, unknown function; NMR {Arabidopsis thaliana} SCOP: b.1.25.1

Probab=98.58  E-value=1.3e-08  Score=76.45  Aligned_cols=102  Identities=13%  Similarity=0.097  Sum_probs=79.4

Q ss_pred             CCCeEEEEeEEeceEEeeCCCCceeEeEEEEEEEEEECCCeEeEEEeCeEEEEEECCeEEEeEEec-CceecCCceeEEE
Q 042038           35 KQPEITAHPVALENITTGGGYPNVTLNATLRMIVTIDNRNYGSFKYRNTTAHVNYRGGIVADVPIE-AALVPARGKINIS  113 (187)
Q Consensus        35 ~~P~~~v~~~~l~~~~~~~~~~~~~ln~~l~~~v~v~NPN~~~i~y~~~~~~v~Y~g~~lg~~~~p-~f~q~~~~t~~i~  113 (187)
                      +.|++++.++++.+++.        ...++.+.++++|||...+.+...+.++.-+|..++++..+ ++..++++++.+.
T Consensus        20 ~~P~v~v~~v~~~~~~~--------~~~~~~~~l~V~NPN~~~lpi~gi~y~l~vng~~lasG~~~~~~~ipa~g~~~v~   91 (151)
T 1xo8_A           20 PKPEGSVTDVDLKDVNR--------DSVEYLAKVSVTNPYSHSIPICEISFTFHSAGREIGKGKIPDPGSLKAKDMTALD   91 (151)
T ss_dssp             CSCCCBCSEEEECCCTT--------TEECEEEEEEEECSSSSCCCCEEEEEEEESSSSCEEEEEEEECCCCSSSSEEEEE
T ss_pred             CCCEEEEEEeEEeccCc--------ceeEEEEEEEEECCCCCCcccccEEEEEEECCEEEEEEecCCCcEECCCCcEEEE
Confidence            67999998888876653        34578888999999999999999999999999999999985 5899999999999


Q ss_pred             EEEEEeeeeeccCccccccc-cCCeEEEEEEEEEE
Q 042038          114 TSADLMADKLLSSPYVLGDI-ESGSLNLTSVANLH  147 (187)
Q Consensus       114 ~~~~~~~~~v~~~~~l~~d~-~~g~v~l~~~~~v~  147 (187)
                      +++.+....+   ..+.+++ ..+.++.++++++.
T Consensus        92 vpv~v~~~~l---~~~~~~l~~~~~i~Y~l~g~l~  123 (151)
T 1xo8_A           92 IPVVVPYSIL---FNLARDVGVDWDIDYELQIGLT  123 (151)
T ss_dssp             ECCCEEHHHH---HHHHHHHHHHSEEEEEEEEEEE
T ss_pred             EEEEEEHHHH---HHHHHhcccCCcccEEEEEEEE
Confidence            8877774333   2344444 34678887655554

>3but_A Uncharacterized protein AF_0446; lipid binding protein, beta barrel, protein structure initia PSI-2; 1.91A {Archaeoglobus fulgidus dsm 4304}

Probab=98.19  E-value=1.3e-05  Score=58.88  Aligned_cols=64  Identities=14%  Similarity=0.072  Sum_probs=55.6

Q ss_pred             eEEEEEEEEEECCCeEeEEEeCeEEEEEECCeEEEeEE-ecCceecCCceeEEEEEEEEeeeeec
Q 042038           61 NATLRMIVTIDNRNYGSFKYRNTTAHVNYRGGIVADVP-IEAALVPARGKINISTSADLMADKLL  124 (187)
Q Consensus        61 n~~l~~~v~v~NPN~~~i~y~~~~~~v~Y~g~~lg~~~-~p~f~q~~~~t~~i~~~~~~~~~~v~  124 (187)
                      .+.+.+.+.++|||.+.+.++..+.+++..|..+|++. ...+..++.+++.+.+++.++-.++.
T Consensus        17 ~t~~~~~l~V~NPN~~~l~i~gl~y~v~lng~~la~G~s~~~~~I~~~g~~~v~v~~~i~~~~l~   81 (136)
T 3but_A           17 QTEIVALAKVRNEDVVPIVVSGYHYTIEMNGVKVADGYENSPVTVKPASATTLKFSLRLNNSFLR   81 (136)
T ss_dssp             EEEEEEEEEEECCSSSCEEEEEEEEEEEETTEEEEEEEECCCEEECTTCEEEEEEEEEEEHHHHT
T ss_pred             EEEEEEEEEEeCCCCcceeeeceEEEEEECCEEEEeeeecCceEECCCCcEEEEEEEEEchHHhH
Confidence            45677889999999999999999999999999999988 57889999999998888887755443

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	187
d1xo8a_	151	Putative dessication related protein LEA14 {Thale	98.66

>d1xo8a_ b.1.25.1 (A:) Putative dessication related protein LEA14 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: LEA14-like
family: LEA14-like
domain: Putative dessication related protein LEA14
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=98.66  E-value=3.1e-09  Score=78.00  Aligned_cols=104  Identities=13%  Similarity=0.089  Sum_probs=79.5

Q ss_pred             ecCCCeEEEEeEEeceEEeeCCCCceeEeEEEEEEEEEECCCeEeEEEeCeEEEEEECCeEEEeEEec-CceecCCceeE
Q 042038           33 KPKQPEITAHPVALENITTGGGYPNVTLNATLRMIVTIDNRNYGSFKYRNTTAHVNYRGGIVADVPIE-AALVPARGKIN  111 (187)
Q Consensus        33 rP~~P~~~v~~~~l~~~~~~~~~~~~~ln~~l~~~v~v~NPN~~~i~y~~~~~~v~Y~g~~lg~~~~p-~f~q~~~~t~~  111 (187)
                      +-+.|++++.++++.++..        ...++.+.++++|||.+++..+..+.+++.+|..++++..+ ++..++++++.
T Consensus        18 ~~~kPev~l~~v~i~~v~~--------~~~~l~~~l~V~NPN~~~l~i~~l~y~l~~~g~~ia~G~~~~~~~ipa~~~~~   89 (151)
T d1xo8a_          18 AIPKPEGSVTDVDLKDVNR--------DSVEYLAKVSVTNPYSHSIPICEISFTFHSAGREIGKGKIPDPGSLKAKDMTA   89 (151)
T ss_dssp             CCCSCCCBCSEEEECCCTT--------TEECEEEEEEEECSSSSCCCCEEEEEEEESSSSCEEEEEEEECCCCSSSSEEE
T ss_pred             CCCCCeEEEEEEEeeeccc--------ceEEEEEEEEEECCCCCceeeeeEEEEEEECCEEEEeEecCCCcEEcCCCcEE
Confidence            5578999999998887764        34667788999999999999999999999999999999875 57999999999


Q ss_pred             EEEEEEEeeeeeccCcccccccc-CCeEEEEEEEEEE
Q 042038          112 ISTSADLMADKLLSSPYVLGDIE-SGSLNLTSVANLH  147 (187)
Q Consensus       112 i~~~~~~~~~~v~~~~~l~~d~~-~g~v~l~~~~~v~  147 (187)
                      +.+++.+....+   ..+.+|+. ++.++.++++.+.
T Consensus        90 v~vpv~v~~~~l---~~~~~~i~~~~~i~Y~l~g~l~  123 (151)
T d1xo8a_          90 LDIPVVVPYSIL---FNLARDVGVDWDIDYELQIGLT  123 (151)
T ss_dssp             EEECCCEEHHHH---HHHHHHHHHHSEEEEEEEEEEE
T ss_pred             EEEEEEEEHHHH---HHHHHhhccCCCccEEEEEEEE
Confidence            998877654333   23444543 4567765444433