Citrus Sinensis ID: 042280

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-
Protein Sequence
MSLTLQLVSKTLTRAHHSPFLTIFSPSDSAFVSSGQPSLSLLEFHFSPLSLPLYSLKKLPCNSKIPTLSPSHSLVITSFPSDCNVSLKGVNLTHKPIYNDGLLVIYGINEFFNPGYGVSDSPFKTDQDAISPCGFSFNDSVNAFEEASGVLRSKGYSLMGSFLELQLLGFSDRSGIAELTVFAPFDGVMMDYVGNVSEYSSLLLRHTVPCKISWSDLVGFDDGDALKTFLNGFKINVTRSDGDDDLLMLNGVVISSPNLYYSDWLVVHGIHEVLAVPATTKEATESSSQMGGEIAPDRSEF
Secondary Structure (PSIPRED)
ccccccccccccccccccccEEEEEcccHHHHccccccHHHHHHHcccccccHHHHcccccccccccccccccEEEEEcccccEEEEccEEEEcccccccccEEEEEEEccccccccccccccccccccccccccccccccHHHHHHHHHHHHcccHHHHHHHHHHHccccccccccccEEEccccHHHHHccccHHHHHHHHHccccccccccccccccccccEEEcccccEEEEEEEccccccEEEEccEEEEcccEEEcccEEEEEEccccccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cccHHHHHHcccccccccccEEEEccccHHHHccccccHHHHHHHcccccccHHHHHccccccEccccccccEEEEEEcccccEEEEccEEEEccccccccEEEEEEccccccccccccccccccccccccccccccccccHHHHHHHHHHHccccHHHHHHHHHHHHcHHHccccccEEEEccccHHHHcccccccHHHHHHHHHEccccccHHHHHccccccEccccccccEEEEEEccccccEEEEccEEEEcccEEEccEEEEEccccccccccccccccccccccccccccccccc
Coil and Loop (DISEMBL)
MSLTLQLVSKTLtrahhspfltifspsdsafvssgqpslsllefhfsplslplyslkklpcnskiptlspshslvitsfpsdcnvslkgvnlthkpiyndglLVIYGIneffnpgygvsdspfktdqdaispcgfsfndsVNAFEEASGVLRSKGYSLMGSFLELQllgfsdrsgiaeltvfapfdgvmMDYVGNVSEYSSLLLRhtvpckiswsdlvgfddgdALKTFLNGFKInvtrsdgdddllMLNGvvisspnlyysdwLVVHGIHevlavpattkeatesssqmggeiapdrsef
Flexible Loop (DISEMBL)
MSLTLQLVSKTLTRAHHSPFLTIFSPSDSAFVSSGQPSLSLLEFHFSPLSLPLYSLKKLPCNSKIPTLSPSHSLVITSFPSDCNVSLKGVNLTHKPIYNDGLLVIYGINEFFNPGYGVSDSPFKTDQDAISPCGFSFNDSVNAFEEASGVLRSKGYSLMGSFLELQLLGFSDRSGIAELTVFAPFDGVMMDYVGNVSEYSSLLLRHTVPCKISWSDLVGFDDGDALKTFLNGFKINvtrsdgdddlLMLNGVVISSPNLYYSDWLVVHGIHEVLAVpattkeatesssqmggeiapdrsef
Low Complexity Region (SEG)
MSLTLQLVSKTLTRAHHSPFLTIFSPSDSAFVSSGQPSLSLLEFHFsplslplyslkklpCNSKIPTLSPSHSLVITSFPSDCNVSLKGVNLTHKPIYNDGLLVIYGINEFFNPGYGVSDSPFKTDQDAISPCGFSFNDSVNAFEEASGVLRSKGYSLMGSFLELQLLGFSDRSGIAELTVFAPFDGVMMDYVGNVSEYSSLLLRHTVPCKISWSDLVGFDDGDALKTFLNGFKINVTRSDGDDDLLMLNGVVISSPNLYYSDWLVVHGIHEVLAVPATTKEATESSSQMGGEIAPDRSEF
Disordered region (IsUnstruct)
***********LTRAHHSPFLTIFS************SLSLLEFHFSPLSLPLYSLKKLPCNSKIPTLSPSHSLVITSFPSDCNVSLKGVNLTHKPIYNDGLLVIYGINEFFNPGYGVSDSPFKTDQDAISPCGFSFNDSVNAFEEASGVLRSKGYSLMGSFLELQLLGFSDRSGIAELTVFAPFDGVMMDYVGNVSEYSSLLLRHTVPCKISWSDLVGFDDGDALKTFLNGFKINV*********LMLNGVVISSPNLYYSDWLVVHGIHEVLAVP************************
Disordered Region (DISOPRED)
*SLTLQLVSKT***AHHSPFLTIFSPSDSAFVSSGQPSLSLLEFHFSPLSLPLYSLKKLPCNSKIPTLSPSHSLVITSFPSDCNVSLKGVNLTHKPIYNDGLLVIYGINEFFNPGYGVSDSPFKTDQDAISPCGFSFNDSVNAFEEASGVLRSKGYSLMGSFLELQLLGFSDRSGIAELTVFAPFDGVMMDYVGNVSEYSSLLLRHTVPCKISWSDLVGFDDGDALKTFLNGFKINVTRSDGDDDLLMLNGVVISSPNLYYSDWLVVHGIHEVLAVPA***********************
Disordered Region (DISEMBL)
MSLTLQLVSKTLTRAHHSPFLTIFSPSDSAFVSSGQPSLSLLEFHFSPLSLPLYSLKKLPCNSKIPTLSPSHSLVITSFPSDCNVSLKGVNLTHKPIYNDGLLVIYGINEFFNPGYGVSDSPFKTDQDAISPCGFSFNDSVNAFEEASGVLRSKGYSLMGSFLELQLLGFSDRSGIAELTVFAPFDGVMMDYVGNVSEYSSLLLRHTVPCKISWSDLVGFDDGDALKTFLNGFKINVTRSDGDDDLLMLNGVVISSPNLYYSDWLVVHGIHEVLAVPAT**********************
Disordered Region (DISPRO)
*****QL*SKTLTRAHHSPFLTIFSPSDSAFVSSGQPSLSLLEFHFSPLSLPLYSLKKLPCNSKIPTLSPSHSLVITSFPSDCNVSLKGVNLTHKPIYNDGLLVIYGINEFFNPGYGVSDSPFKTDQDAIS***FSFNDSVNAFEEASGVLRSKGYSLMGSFLELQLLGFSDRSGIAELTVFAPFDGVMMDYVGNVSEYSSLLLRHTVPCKISWSDLVGFDDGDALKTFLNGFKINVTRSDGDDDLLMLNGVVISSPNLYYSDWLVVHGIHEVLAVP************************
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MSLTLQLVSKTLTRAHHSPFLTIFSPSDSAFVSSGQPSLSLLEFHFSPLSLPLYSLKKLPCNSKIPTLSPSHSLVITSFPSDCNVSLKGVNLTHKPIYNDGLLVIYGINEFFNPGYGVSDSPFKTDQDAISPCGFSFNDSVNAFEEASGVLRSKGYSLMGSFLELQLLGFSDRSGIAELTVFAPFDGVMMDYVGNVSEYSSLLLRHTVPCKISWSDLVGFDDGDALKTFLNGFKINVTRSDGDDDLLMLNGVVISSPNLYYSDWLVVHGIHEVLAVPATTKEATESSSQMGGEIAPDRSEF
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	301	2.2.26 [Sep-21-2011]
Q9FGW0	424	Putative fasciclin-like a	yes	no	0.903	0.641	0.323	5e-33
Q5Q0H2	248	Fasciclin-like arabinogal	no	no	0.488	0.592	0.278	1e-08
Q9FL53	353	Fasciclin-like arabinogal	no	no	0.833	0.711	0.248	5e-07

>sp|Q9FGW0|FLA20_ARATH Putative fasciclin-like arabinogalactan protein 20 OS=Arabidopsis thaliana GN=FLA20 PE=3 SV=1

 Score =  141 bits (356), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 102/315 (32%), Positives = 158/315 (50%), Gaps = 43/315 (13%)

Query: 1   MSLTLQLVSKTLTRAHHSPFLTIFSPSDSAFVSSGQPSLSLLEFHFSPLSLPLYSLKKLP 60
           M LTL+L ++ L        LT+F+PSD +F   GQPSL  +++  SP  LP  +L+ LP
Sbjct: 84  MGLTLKLANQDLNLEDWQE-LTLFAPSDQSFSKFGQPSLLDMKYQLSPTRLPGETLRNLP 142

Query: 61  CNSKIPTLSPSHSLVITSFPS-DCNVSLKGVNLTHKPIYNDGLLVIYGINEFFN------ 113
             +KIPTL  ++SL +T+        S+  V +   P+++DG +VIYG +EFF       
Sbjct: 143 NGAKIPTLRSNYSLTVTNSSRFGGKTSINNVVVQDSPVFDDGYVVIYGSDEFFTSPTKIS 202

Query: 114 ---------------------PGYGVSDSP---FKTDQDAISPCGFSFNDSVNAFEEASG 149
                                P       P     +D     P      +  N FE AS 
Sbjct: 203 DDSSSSSSIPSTTSSTGSIPIPSSATQTPPSPNIASDSTRNLPNRSKPVNRFNIFESASR 262

Query: 150 VLRSKGYSLMGSFLELQLLGFSDRSGI-AELTVFAPFDGVMMDYVGNVSEYSSLLLRHTV 208
           +L S+G+ ++ +FL LQL    + SG   ++TVFAP D  + +     S+Y ++   H V
Sbjct: 263 LLMSRGFVIIATFLALQLE--DNTSGNDTKITVFAPIDEAIPNPTTKFSDYVTIFRGHVV 320

Query: 209 PCKISWSDLVGF-DDGDALKTFLNGFKINVTRSDGDDDLLMLNGVVISSPNLYYSDWLVV 267
              + W DL  F  +G  L+T L G++I ++ S    D+L+LNGV +  P+LY +DW+ V
Sbjct: 321 SQLLLWKDLQKFAKEGSILQTVLKGYEIEISLSG---DILLLNGVPLIYPDLYVNDWIAV 377

Query: 268 HGIHEVLAVPATTKE 282
           HG ++++     TKE
Sbjct: 378 HGFNQMIV----TKE 388

May be a cell surface adhesion protein.
Arabidopsis thaliana (taxid: 3702)

>sp|Q5Q0H2|FLA19_ARATH Fasciclin-like arabinogalactan protein 19 OS=Arabidopsis thaliana GN=FLA19 PE=2 SV=2

 Score = 60.5 bits (145), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 44/158 (27%), Positives = 79/158 (50%), Gaps = 11/158 (6%)

Query: 141 VNAFEEASGVLRSKGYSLMGSFLELQLLGF---SDRSGIAELTVFAPFDGVM--MDYVGN 195
           +   E A  +LR +G +L  + +    L F   SD S    LT+FAP D ++  +D   +
Sbjct: 32  LEELERAIAILRVRGRALFANAIITSDLLFDLLSDES----LTLFAPTDSMLFDLDMTHS 87

Query: 196 VSEYSSLLLRHTVPCKISWSDLVGFDDGDALKTFLNGFKINVTRSDGDDDLLMLNGVVIS 255
           +  Y S L  H+VP ++S S L    +  +L T L   ++ +T+    +D + L+GV + 
Sbjct: 88  LPFYVSTLRLHSVPLRLSLSGLRSLPNSSSLPTLLPSHRLLLTKHSSSNDSIFLDGVQLL 147

Query: 256 SPNLYYSDWLVVHGIHEVLAV--PATTKEATESSSQMG 291
            P L+    + VHG+ ++L +  P++     E S+ + 
Sbjct: 148 IPGLFDGQHIAVHGLADLLPLTAPSSPNRLVEDSTALA 185

May be a cell surface adhesion protein.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9FL53|FLA21_ARATH Fasciclin-like arabinogalactan protein 21 OS=Arabidopsis thaliana GN=FLA21 PE=2 SV=1

 Score = 55.5 bits (132), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 70/282 (24%), Positives = 120/282 (42%), Gaps = 31/282 (10%)

Query: 18  SPFLTIFSPSDSAF--VSSGQPSL--SLLEFHFSPLSLPLYSLKKLPCNSKIPTLSPSHS 73
           SP  T+F+  D++F   SS  P     LL +H  PL L +  L K P  + +PTL    S
Sbjct: 79  SPNTTLFAIEDASFFNTSSLHPLFLKQLLHYHTLPLMLSMDDLLKKPQGTCLPTLLHHKS 138

Query: 74  LVITSFPSDCNVS-LKGVNLTHKPIYNDGLLVIYGINEFFNP-----------GYGVSDS 121
           + I++   +   + +  V +TH  ++    LVI+G+   F+P               SD+
Sbjct: 139 VQISTVNQESRTAEVNHVRITHPDMFLGDSLVIHGVIGPFSPLQPHSDHLIHTPLCQSDT 198

Query: 122 PFKTDQDAISPCGFSFNDSVNAFEEASGVLRSKGYSLMGSFLELQLLGFSDRSGIAELTV 181
             KT  +   P    +   V        V  + G   + S L   +   +    +  +T+
Sbjct: 199 TNKTSNNEEVPVSIDWTRIVQLLSSNGFVPFAIG---LHSVLNRIVNDHNHHKNLTGVTI 255

Query: 182 FAPFDGVMMDYVGNVSEYSSLLLRHTVPC-KISWSDLVGFDDGDALKTF-----LNGFKI 235
            A  + V +    + S +   ++RH +   ++++ D     D   +KT      L   + 
Sbjct: 256 LATPNLVSL---SSASPFLYEVVRHHILVQRLTYKDFASMSDKATVKTLDPYQDLTITRR 312

Query: 236 NVTRSDGDDDLLMLNGVVISSPNLYYSDWLVVHGIHEVLAVP 277
           NV  S GD    M++GV I  P+++ S   V+HGI   L +P
Sbjct: 313 NVNSSGGD---FMISGVEIVDPDMFSSSNFVIHGISHTLEIP 351

May be a cell surface adhesion protein.

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	301
225424180	339	PREDICTED: putative fasciclin-like arabi	0.953	0.846	0.507	2e-73
255588116	339	hypothetical protein RCOM_0377590 [Ricin	0.936	0.831	0.505	1e-63
357444555	340	Fasciclin-like arabinogalactan protein [	0.883	0.782	0.460	2e-60
224101815	348	predicted protein [Populus trichocarpa]	0.916	0.793	0.480	5e-60
224099453	292	predicted protein [Populus trichocarpa]	0.790	0.815	0.467	6e-59
359472642	294	PREDICTED: LOW QUALITY PROTEIN: putative	0.830	0.850	0.455	1e-56
449517307	328	PREDICTED: putative fasciclin-like arabi	0.906	0.832	0.444	2e-55
449435196	287	PREDICTED: putative fasciclin-like arabi	0.906	0.951	0.444	3e-55
449465533	390	PREDICTED: putative fasciclin-like arabi	0.936	0.723	0.409	4e-53
357487529	375	hypothetical protein MTR_5g044170 [Medic	0.950	0.762	0.407	2e-51

>gi|225424180|ref|XP_002280452.1| PREDICTED: putative fasciclin-like arabinogalactan protein 20-like [Vitis vinifera]

 Score =  281 bits (720), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 159/313 (50%), Positives = 213/313 (68%), Gaps = 26/313 (8%)

Query: 1   MSLTLQLVSKTLTRAHHSPFLTIFSPSDSAFVSSGQPSLSLLEFHFSPLSLPLYSLKKLP 60
           MSLTL+LVS+TL     SP  T+F+ SD+AF+ SGQP LSLL+FH SPL+L   SL+ LP
Sbjct: 41  MSLTLELVSQTLLP--KSPSATLFAASDAAFIESGQPPLSLLQFHSSPLALSFESLRSLP 98

Query: 61  CNSKIPTLSPSHSLVITSFPSDCNVSLKGVNLTHKPIYNDGLLVIYGINEFFN---PGYG 117
             +KIPT+  +HSL++TS  SD  +SL  VN+T  P+++DG L+I+G+++FF+   P  G
Sbjct: 99  VGAKIPTMFANHSLIVTSAASDSQISLNNVNITSSPLFDDGSLIIFGVDKFFDLNFPALG 158

Query: 118 VSDSP---FKTDQDAISPCGFSFNDSVNAFEEASGVLRSKGYSLMGSFLELQLLGFSDRS 174
           ++ SP        DAI+  G       ++F+EASGVLRS+GY +M SFL+LQLLGF D +
Sbjct: 159 LTRSPSPNTGCTDDAIASSG------GDSFDEASGVLRSRGYFVMASFLDLQLLGFRDGT 212

Query: 175 GIAELTVFAPFDGVMMDYVGNVSEY-SSLLLRHTVPCKISWSDLVGFDDGDALKTFLNGF 233
              ++TV AP D VMMD VGN S+  SS+ LRH +PCK+SWSDLV FDDG  L T L GF
Sbjct: 213 ---KMTVLAPADEVMMDRVGNFSDISSSIFLRHVLPCKVSWSDLVNFDDGSMLPTSLEGF 269

Query: 234 KINVTRSDGDDDLLMLNGVVISSPNLYYSDWLVVHGIHEVLAVPATTKEATESSSQMGG- 292
            IN+TRS    D L LN V ++ P++Y+SDWLVVHG+ EVL +    ++A +SSS+ GG 
Sbjct: 270 TINITRS---GDTLKLNEVSVAFPDMYHSDWLVVHGLGEVLTLLVGPEQAADSSSETGGS 326

Query: 293 ----EIAPDRSEF 301
               + A   SEF
Sbjct: 327 KTNEQTALGNSEF 339

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255588116|ref|XP_002534506.1| hypothetical protein RCOM_0377590 [Ricinus communis] gi|223525155|gb|EEF27876.1| hypothetical protein RCOM_0377590 [Ricinus communis]

 Score =  249 bits (636), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 148/293 (50%), Positives = 188/293 (64%), Gaps = 11/293 (3%)

Query: 1   MSLTLQLVSKTLTRAHHSPFLTIFSPSDSAFVSSGQPSLSLLEFHFSPLSLPLYSLKKLP 60
           MSLTLQL+S T     HSP LTIFSPSDSAF  SGQPSLSLL+FH  PLS  L SL+ LP
Sbjct: 47  MSLTLQLISSTWI-IPHSPSLTIFSPSDSAFAQSGQPSLSLLQFHLCPLSFHLNSLRALP 105

Query: 61  CNSKIPTLSPSHSLVITSFPSDCNVSLKGVNLTHKPIYNDGLLVIYGINEFFNPGYGVS- 119
             SKIPTLS + S+ I +   +  V L GV +   P Y+DG LV+ G+++F +P + VS 
Sbjct: 106 FGSKIPTLSSNLSITIVN-DDNGTVFLNGVKILGCP-YDDGSLVVLGVDKFLDPDFVVSL 163

Query: 120 --DSPFKTDQDAISPCGFSFNDSVNAFEEASGVLRSKGYSLMGSFLELQLL-GFSDRSGI 176
                      A   CG  F + V  F+EA+ VLRS G S+M SFL+LQL+ GF ++   
Sbjct: 164 ASPPSPVPVPSANLACGSDFKNGVYLFKEATNVLRSNGCSVMASFLDLQLMSGFKEKQR- 222

Query: 177 AELTVFAPFDGVMMDYVGNVSEYSSLLLRHTVPCKISWSDLVGFDDGDALKTFLNGFKIN 236
             LTVFAP D VM  ++G+V +YS + LRH VPCKI+W DLV FDDG    TFL GF I 
Sbjct: 223 PLLTVFAPLDEVMKGFIGDVDQYSLIFLRHVVPCKITWKDLVDFDDGMVFDTFLEGFGIT 282

Query: 237 VTRSDGDDDLLMLNGVVISSPNLYYSDWLVVHGIHEVLAVPATTKEATESSSQ 289
           V+RS    D+LMLN V +S P++Y ++WLVVHG+  +L  P   +E  +SS Q
Sbjct: 283 VSRS---GDILMLNEVPVSFPDMYRNEWLVVHGLRGMLDGPDRKQEVRKSSFQ 332

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357444555|ref|XP_003592555.1| Fasciclin-like arabinogalactan protein [Medicago truncatula] gi|355481603|gb|AES62806.1| Fasciclin-like arabinogalactan protein [Medicago truncatula]

 Score =  238 bits (607), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 128/278 (46%), Positives = 184/278 (66%), Gaps = 12/278 (4%)

Query: 1   MSLTLQLVSKTLTRAHHSPFLTIFSPSDSAFVSSGQPSLSLLEFHFSPLSLPLYSLKKLP 60
           MSLTL++V+++L    HS   T+F+PSDSAF  SGQPSL LL FHF  L LP  SL++LP
Sbjct: 43  MSLTLEIVAESLLEQSHSA--TVFAPSDSAFKKSGQPSLDLLRFHFVMLPLPQQSLRRLP 100

Query: 61  CNSKIPTLSPSHSLVITSFPSDCNVSLKGVNLTHKPIYNDGLLVIYGINEFFNPGYGVSD 120
             +K+PT+    SL +T+  SD   S+  + +   PIY+DG+L++YGI+ FF+P +  + 
Sbjct: 101 AGAKLPTMLTGQSLTVTTSFSDRVTSVNNIKINGTPIYDDGVLLVYGIDRFFDPNFQYTG 160

Query: 121 SPFKTDQDAISPCGFSFNDSVN---AFEEASGVLRSKGYSLMGSFLELQLLGFSDRSGIA 177
              K +  + S C  + N +VN   +FE+A   L++ GYS+M SFL +QL G  +++GI 
Sbjct: 161 PSRKPNSYSNSSCS-ALNRTVNSSGSFEQAVKTLKTSGYSVMASFLGMQLSGNINQNGI- 218

Query: 178 ELTVFAPFDGVMMDYVGNVSEYSSLLLRHTVPCKISWSDLVGFDDGDALKTFLNGFKINV 237
             TVFAP D ++M+ +G+  +Y S   RH VPCK  W+DLV F DG  L TFL GF IN+
Sbjct: 219 --TVFAPTDEMVMNRIGDFEDYPSFFRRHVVPCKFLWNDLVDFGDGTQLPTFLEGFSINI 276

Query: 238 TRSDGDDDLLMLNGVVISSPNLYYSDWLVVHGIHEVLA 275
           TRS G   +L+LNGV +  P+++++D LVVHG+ +VLA
Sbjct: 277 TRSGG---VLILNGVPVFFPDVFFNDRLVVHGVTDVLA 311

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224101815|ref|XP_002312431.1| predicted protein [Populus trichocarpa] gi|222852251|gb|EEE89798.1| predicted protein [Populus trichocarpa]

 Score =  237 bits (604), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 138/287 (48%), Positives = 178/287 (62%), Gaps = 11/287 (3%)

Query: 1   MSLTLQLVSKT-LTRAHHSPFLTIFSPSDSAFVSSGQPSLSLLEFHFSPLSLPLYSLKKL 59
           M+L L+  S+T L     S  LTIFSPSD+AF  SGQPSL LL FHF+P S  L SLK L
Sbjct: 42  MALILEFGSQTDLIPPSQS--LTIFSPSDTAFSLSGQPSLDLLHFHFTPRSFSLNSLKSL 99

Query: 60  PCNSKIPTLSPSHSLVITSFPSDCNVSLKGVNLTHKPIYNDGLLVIYGINEFFNPGYGVS 119
           P   +IPTL  +HSLVI+S  +D   S+ GV +    +Y+DG LVI+G++ F +P + VS
Sbjct: 100 PPGYQIPTLFSNHSLVISS-NADSQTSVNGVKINGSALYDDGFLVIFGVDNFLDPDFTVS 158

Query: 120 DSPFKTDQDAISPCGFSFNDSVNAFEEASGVLRSKGYSLMGSFLELQLLGFSDRSGIAEL 179
            S        I  C  +  D   +FEEASGVL+S+GYS+M SFL+LQL  F D +    L
Sbjct: 159 GS-INGSTGGIRGCYVTSGDDDCSFEEASGVLKSRGYSVMASFLDLQLAKFKDHT---RL 214

Query: 180 TVFAPFDGVMMDYVGNVSEYSSLLLRHTVPCKISWSDLVGFDDGDALKTFLNGFKINVTR 239
           T+ AP D V+  ++G+ S+Y S+ LRH VPCKISW DLV  DDG  L T+L GFKINVT 
Sbjct: 215 TILAPVDEVLKGFMGDFSDYRSIFLRHVVPCKISWRDLVSLDDGVVLPTYLRGFKINVTV 274

Query: 240 SDGDDDLLMLNGVVISSPNLYYSDWLVVHGIHEVLAVPATTKEATES 286
           S      LM NGV +  P +Y + WL VHG+   L +   T  A+ +
Sbjct: 275 S---STFLMFNGVQVIVPEIYSNSWLTVHGLGGSLVMQEPTATASNA 318

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224099453|ref|XP_002311490.1| predicted protein [Populus trichocarpa] gi|222851310|gb|EEE88857.1| predicted protein [Populus trichocarpa]

 Score =  233 bits (595), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 131/280 (46%), Positives = 178/280 (63%), Gaps = 42/280 (15%)

Query: 1   MSLTLQLVSKTLTRAHHSPFLTIFSPSDSAFVSSGQPSLSLLEFHFSPLSLPLYSLKKLP 60
           MSLTL LVS +L    H+P LTIFSPSD+AF  SGQP LS+L  HFSPLS PL SL+ L 
Sbjct: 43  MSLTLPLVSNSLIP--HTPSLTIFSPSDTAFTQSGQPPLSILRLHFSPLSFPLNSLESLS 100

Query: 61  CNSKIPTLSPSHSLVITSFPSDCNVSLKGVNLTHKPIYNDGLLVIYGINEFFNPGYGVSD 120
             +KIP+L P++SL ITS   D  VSL GV +   P+Y+DG LVI G++ FF+ G+GV  
Sbjct: 101 LGAKIPSLFPNYSLTITSTGDD--VSLNGVKIKDSPVYDDGSLVILGVDRFFDTGFGV-- 156

Query: 121 SPFKTDQDAISPCGFSFNDSVNAFEEASGVLRSKGYSLMGSFLELQLL-GFSDRSGIAEL 179
                                         L SKGYS+M SFL+LQL+ GF+D++    L
Sbjct: 157 ------------------------------LNSKGYSVMASFLDLQLMVGFTDKTA---L 183

Query: 180 TVFAPFDGVMMDYVGNVSEYSSLLLRHTVPCKISWSDLVGFDDGDALKTFLNGFKINVTR 239
           T+FAP D V+  ++G++ EYSS+ L+H VPCKI W DLV FDDG  L+T+L GF I V+ 
Sbjct: 184 TIFAPVDEVIKAFLGDLREYSSMFLKHAVPCKIMWGDLVNFDDGVVLETYLEGFGITVST 243

Query: 240 SDGDDDLLMLNGVVISSPNLYYSDWLVVHGIHEVLAVPAT 279
           S   D+L++ +   ++ P++Y++DWLV+HG+  +L  P +
Sbjct: 244 S--GDNLMLNDQASVNFPDMYHNDWLVIHGLQSILKEPES 281

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359472642|ref|XP_003631181.1| PREDICTED: LOW QUALITY PROTEIN: putative fasciclin-like arabinogalactan protein 20-like [Vitis vinifera]

 Score =  226 bits (575), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 134/294 (45%), Positives = 181/294 (61%), Gaps = 44/294 (14%)

Query: 1   MSLTLQLVSKTLTRAHHSPFLTIFSPSDSAFVSSGQPSLSLLEFHFSPLSLPLYSLKKLP 60
           MSLTL+LVS+TL     SP  T+F+ SD+AF+ SGQP LSLL+FH SPL+L   SL   P
Sbjct: 41  MSLTLELVSQTLLP--KSPSATLFAASDAAFIESGQPPLSLLQFHSSPLALSFESLSSPP 98

Query: 61  CNSKIPTLSPSHSLVITSFPSDCNVSLKGVNLTHKPIYNDGLLVIYGINEFFNPGY---G 117
             +KIPT+  +HSL++TS  SD  +SL  VN+T  P+++DG L+I+G+++FF+P +   G
Sbjct: 99  VGAKIPTMFANHSLIVTSXASDSQISLNNVNITSSPLFDDGSLIIFGVDKFFDPNFPALG 158

Query: 118 VSDSPFKTDQDAISPCGFSFNDSVNAFEEASGVLRSKGYSLMGSFLELQLLGFSDRSGIA 177
           ++ SP        SP     +D++           S G+                R G  
Sbjct: 159 LTRSP--------SPNAGCTDDAI----------ASSGF----------------RDG-T 183

Query: 178 ELTVFAPFDGVMMDYVGNVSEYSS-LLLRHTVPCKISWSDLVGFDDGDALKTFLNGFKIN 236
           ++TV AP D VMMD VGN S  SS + LRH +PCK+SWSDLV FDDG  L T L GF IN
Sbjct: 184 KVTVLAPADEVMMDRVGNFSNISSSIFLRHVLPCKVSWSDLVNFDDGSMLPTSLEGFTIN 243

Query: 237 VTRSDGDDDLLMLNGVVISSPNLYYSDWLVVHGIHEVLAVPATTKEATESSSQM 290
           + RS    D L LN V ++ P++YYSDWLVVHG+ EVL +    ++A +SSSQ+
Sbjct: 244 IIRS---GDTLKLNEVSVAFPDMYYSDWLVVHGLGEVLTLLEGPEQAADSSSQI 294

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449517307|ref|XP_004165687.1| PREDICTED: putative fasciclin-like arabinogalactan protein 20-like [Cucumis sativus]

 Score =  222 bits (565), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 129/290 (44%), Positives = 175/290 (60%), Gaps = 17/290 (5%)

Query: 1   MSLTLQLVSKTLTRAHHSPFLTIFSPSDSAFVSSGQPSLSLLEFHFSPLSLPLYSLKKLP 60
           M+LTL+L++ +L    +S  +TIFSP D++FV SGQPSLSLL FHF PL L   SL+   
Sbjct: 42  MALTLELIADSLLSQSNS--ITIFSPPDTSFVQSGQPSLSLLRFHFLPLYLSSGSLRSFA 99

Query: 61  CNSKIPTLSPSHSLVITSFPSDCNVSLKGVNLTHKPIYNDGLLVIYGINEFFNPGYGVSD 120
             +KIPT+ PS SL +T+  SD  +SL  V ++  P Y+DGLLV+YGI +FF+  +   +
Sbjct: 100 FGTKIPTMLPSQSLTVTTPQSDSVISLNRVKVSSSPFYDDGLLVVYGIEKFFDLKFHSPN 159

Query: 121 SPFKTDQDAISPCGFSFNDSVNAFEEASGVLRSKGYSLMGSFLELQLLGFSDRSGIAELT 180
             F+ D   I           N F EA   LRS GYS M  FLE Q+LGFS+    + +T
Sbjct: 160 MKFRCDLLTIR----------NPFGEAIETLRSHGYSSMALFLESQILGFSNGQS-SMMT 208

Query: 181 VFAPFDGVMMDYVGNVSEYSSLLLRHTVPCKISWSDLVGFDDGDALKTFLNGFKINVTRS 240
           VFAP D  +   V   ++Y SL  R   PC+ISW+DLV  +DG  L T+  G+ I VT+S
Sbjct: 209 VFAPSDDALETRVDKFTDYPSLYFRQISPCRISWNDLVDLEDGTELSTYSEGYTIYVTKS 268

Query: 241 DGDDDLLMLNGVVISSPNLYYSDWLVVHGIHEVLAVPATTKEATESSSQM 290
            G   +L +NGV +  PN+Y ++WLVVHG+ +V  V A      ES S+M
Sbjct: 269 SG---MLRINGVAVFYPNMYLNEWLVVHGLLDVFPV-AERISTVESDSEM 314

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449435196|ref|XP_004135381.1| PREDICTED: putative fasciclin-like arabinogalactan protein 20-like [Cucumis sativus]

 Score =  221 bits (563), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 129/290 (44%), Positives = 175/290 (60%), Gaps = 17/290 (5%)

Query: 1   MSLTLQLVSKTLTRAHHSPFLTIFSPSDSAFVSSGQPSLSLLEFHFSPLSLPLYSLKKLP 60
           M+LTL+L++ +L    +S  +TIFSP D++FV SGQPSLSLL FHF PL L   SL+   
Sbjct: 1   MALTLELIADSLLSQSNS--ITIFSPPDTSFVQSGQPSLSLLRFHFLPLYLSSGSLRSFA 58

Query: 61  CNSKIPTLSPSHSLVITSFPSDCNVSLKGVNLTHKPIYNDGLLVIYGINEFFNPGYGVSD 120
             +KIPT+ PS SL +T+  SD  +SL  V ++  P Y+DGLLV+YGI +FF+  +   +
Sbjct: 59  FGTKIPTMLPSQSLTVTTPQSDSVISLNRVKVSSSPFYDDGLLVVYGIEKFFDLKFHSPN 118

Query: 121 SPFKTDQDAISPCGFSFNDSVNAFEEASGVLRSKGYSLMGSFLELQLLGFSDRSGIAELT 180
             F+ D   I           N F EA   LRS GYS M  FLE Q+LGFS+    + +T
Sbjct: 119 MKFRCDLLTIR----------NPFGEAIETLRSHGYSSMALFLESQILGFSNGQS-SMMT 167

Query: 181 VFAPFDGVMMDYVGNVSEYSSLLLRHTVPCKISWSDLVGFDDGDALKTFLNGFKINVTRS 240
           VFAP D  +   V   ++Y SL  R   PC+ISW+DLV  +DG  L T+  G+ I VT+S
Sbjct: 168 VFAPSDDALETRVDKFTDYPSLYFRQISPCRISWNDLVDLEDGTELSTYSEGYTIYVTKS 227

Query: 241 DGDDDLLMLNGVVISSPNLYYSDWLVVHGIHEVLAVPATTKEATESSSQM 290
            G   +L +NGV +  PN+Y ++WLVVHG+ +V  V A      ES S+M
Sbjct: 228 SG---MLRINGVAVFYPNMYLNEWLVVHGLLDVFPV-AERISTVESDSEM 273

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449465533|ref|XP_004150482.1| PREDICTED: putative fasciclin-like arabinogalactan protein 20-like [Cucumis sativus] gi|449503425|ref|XP_004161996.1| PREDICTED: putative fasciclin-like arabinogalactan protein 20-like [Cucumis sativus]

 Score =  214 bits (545), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 122/298 (40%), Positives = 178/298 (59%), Gaps = 16/298 (5%)

Query: 1   MSLTLQLVSKTLTRAHHSPFLTIFSPSDSAFVSSGQPSLSLLEFHFSPLSLPLYSLKKLP 60
           MSL L L S++    HH   LTIF+P DSAF  SGQP LSLL++H  P +    SL+ LP
Sbjct: 79  MSLILDLASRSFL--HHFSSLTIFAPPDSAFSRSGQPPLSLLQYHLLPHAFSAESLRSLP 136

Query: 61  CNSKIPTLSPSHSLVITSFPSDCNVSLKGVNLTHKPIYNDGLLVIYGINEFFNPGYGVSD 120
            N+KI T+ PS  L +T+   +  +SL  V +   P+Y+DG L+I+GI + FNP + +S+
Sbjct: 137 LNAKISTMLPSRFLTVTN--DETRISLNNVTVDSPPVYDDGSLIIFGIEKLFNPFFDISN 194

Query: 121 SPFKTDQDAISPCGFSFNDSVNA--FEEASGVLRSKGYSLMGSFLELQLLGFSDRSGIAE 178
           +  K      + C    +  + +   E  +  LR++G+++MGSFL+LQ+LGF      A 
Sbjct: 195 ASSKRIMHPDNECRRRGDSEIESKPVEALAAALRNRGWTVMGSFLDLQILGFHKE---AA 251

Query: 179 LTVFAPFDGVMMDYVGNVSEYSSLLLRHTVPCKISWSDLVGFDDGDALKTFLNGFKINVT 238
           +T+FAP D  +M+ V N S++ S+  RH VPCK+ WSDL     G  +KT+L GF INV 
Sbjct: 252 VTIFAPTDDSLMNRVSNFSDWMSMFRRHVVPCKLWWSDLTNLGGGAEIKTYLRGFVINVK 311

Query: 239 RSDGDDDLLMLNGVVISSPNLYYSDWLVVHGIHEVLAVPATTK----EATESSSQMGG 292
           RS+G   +L LN V +  P++ YS+ +VVHGI  +L +    K    E+  SS + GG
Sbjct: 312 RSNG---VLTLNDVSVIYPDMLYSEGIVVHGIGGILDIEMEMKGEIEESPSSSMRNGG 366

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357487529|ref|XP_003614052.1| hypothetical protein MTR_5g044170 [Medicago truncatula] gi|355515387|gb|AES97010.1| hypothetical protein MTR_5g044170 [Medicago truncatula]

 Score =  209 bits (531), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 121/297 (40%), Positives = 175/297 (58%), Gaps = 11/297 (3%)

Query: 1   MSLTLQLVSKTLTRAHHSPFLTIFSPSDSAFVSSGQPSLSLLEFHFSPLSLPLYSLKKLP 60
           M+L L+L S +L     S  LTIF+P++ AF    Q  LSLL +   P +  L+SL+ LP
Sbjct: 47  MALNLELASHSLIARRQSRSLTIFAPTNFAFSQIPQLPLSLLRYQLLPHAFSLHSLRSLP 106

Query: 61  CNSKIPTLSPSHSLVITSFPSDCNVSLKGVNLTHKPIYNDGLLVIYGINEFFNPGYGV-- 118
             + + TL P HSL +T+  SD  +S+  V +   P+ +DG LVI+    FF+P + +  
Sbjct: 107 FGANVATLLPGHSLTVTT-TSDRKLSINNVTVNPTPLLDDGYLVIFQTESFFDPYFQLPR 165

Query: 119 -SDSPFKTDQDAISPCGFS-----FNDSVNAFEEASGVLRSKGYSLMGSFLELQLLGFSD 172
            S +   + +      GF       + S   F+EASGVLRS+G S+M +FL+LQ LG  +
Sbjct: 166 PSGASCFSSRKISGDGGFGSKRLITDSSTFPFKEASGVLRSRGCSVMAAFLDLQFLGLKE 225

Query: 173 RSGIAELTVFAPFDGVMMDYVGNVSEYSSLLLRHTVPCKISWSDLVGFDDGDALKTFLNG 232
           R    +LTVFAP D  M+ +VGNV+EYS +L RH VPCKI W+DLV  ++G  + T+   
Sbjct: 226 RPD--QLTVFAPIDEAMVSHVGNVTEYSDILRRHLVPCKIVWNDLVVLEEGTLIWTYQRD 283

Query: 233 FKINVTRSDGDDDLLMLNGVVISSPNLYYSDWLVVHGIHEVLAVPATTKEATESSSQ 289
           F +NV  S G D  L+ NGV +  P+LY SDWLVVHGI ++L     ++E +   ++
Sbjct: 284 FTLNVKTSAGSDLFLLNNGVPVVFPDLYVSDWLVVHGIGDILLDTVRSEEVSVQDAE 340

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	301
TAIR|locus:2167742	424	FLA20 "AT5G40940" [Arabidopsis	0.488	0.346	0.341	5.5e-33
TAIR|locus:2037873	248	AT1G15190 "AT1G15190" [Arabido	0.481	0.584	0.28	9.5e-10
TAIR|locus:2169464	353	FLA21 "AT5G06920" [Arabidopsis	0.837	0.713	0.238	4.6e-05

TAIR|locus:2167742 FLA20 "AT5G40940" [Arabidopsis thaliana (taxid:3702)]

 Score = 224 (83.9 bits), Expect = 5.5e-33, Sum P(2) = 5.5e-33
 Identities = 53/155 (34%), Positives = 88/155 (56%)

Query:   142 NAFEEASGVLRSKGYSLMGSFLELQLLGFSDRSGI-AELTVFAPFDGVMMDYVGNVSEYS 200
             N FE AS +L S+G+ ++ +FL LQL    + SG   ++TVFAP D  + +     S+Y 
Sbjct:   255 NIFESASRLLMSRGFVIIATFLALQLE--DNTSGNDTKITVFAPIDEAIPNPTTKFSDYV 312

Query:   201 SLLLRHTVPCKISWSDLVGF-DDGDALKTFLNGFKINVTRSDGDDDLLMLNGVVISSPNL 259
             ++   H V   + W DL  F  +G  L+T L G++I ++ S    D+L+LNGV +  P+L
Sbjct:   313 TIFRGHVVSQLLLWKDLQKFAKEGSILQTVLKGYEIEISLSG---DILLLNGVPLIYPDL 369

Query:   260 YYSDWLVVHGIHEVLAVPATTKEATESSSQMG-GE 293
             Y +DW+ VHG ++++       +  +S + +  GE
Sbjct:   370 YVNDWIAVHGFNQMIVTKEKQVDVGDSITVLNNGE 404

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM

TAIR|locus:2037873 AT1G15190 "AT1G15190" [Arabidopsis thaliana (taxid:3702)]

 Score = 158 (60.7 bits), Expect = 9.5e-10, P = 9.5e-10
 Identities = 42/150 (28%), Positives = 76/150 (50%)

Query:   145 EEASGVLRSKGYSLMGSFLELQLLGFSDRSGIAELTVFAPFDGVM--MDYVGNVSEYSSL 202
             E A  +LR +G +L  + +    L F D      LT+FAP D ++  +D   ++  Y S 
Sbjct:    36 ERAIAILRVRGRALFANAIITSDLLF-DLLSDESLTLFAPTDSMLFDLDMTHSLPFYVST 94

Query:   203 LLRHTVPCKISWSDLVGFDDGDALKTFLNGFKINVTRSDGDDDLLMLNGVVISSPNLYYS 262
             L  H+VP ++S S L    +  +L T L   ++ +T+    +D + L+GV +  P L+  
Sbjct:    95 LRLHSVPLRLSLSGLRSLPNSSSLPTLLPSHRLLLTKHSSSNDSIFLDGVQLLIPGLFDG 154

Query:   263 DWLVVHGIHEVLAV--PATTKEATESSSQM 290
               + VHG+ ++L +  P++     E S+ +
Sbjct:   155 QHIAVHGLADLLPLTAPSSPNRLVEDSTAL 184

GO:0003674 "molecular_function" evidence=ND

TAIR|locus:2169464 FLA21 "AT5G06920" [Arabidopsis thaliana (taxid:3702)]

 Score = 123 (48.4 bits), Expect = 4.6e-05, P = 4.6e-05
 Identities = 67/281 (23%), Positives = 122/281 (43%)

Query:    18 SPFLTIFSPSDSAF--VSSGQPSL--SLLEFHFXXXXXXXXXXXXXXCNSKIPTLSPSHS 73
             SP  T+F+  D++F   SS  P     LL +H                 + +PTL    S
Sbjct:    79 SPNTTLFAIEDASFFNTSSLHPLFLKQLLHYHTLPLMLSMDDLLKKPQGTCLPTLLHHKS 138

Query:    74 LVITSFPSDCNVS-LKGVNLTHKPIYNDGLLVIYGINEFFNPGYGVSDSPFKT---DQDA 129
             + I++   +   + +  V +TH  ++    LVI+G+   F+P    SD    T     D 
Sbjct:   139 VQISTVNQESRTAEVNHVRITHPDMFLGDSLVIHGVIGPFSPLQPHSDHLIHTPLCQSDT 198

Query:   130 ISPCGFSFNDSVNAFEEASGV---LRSKGYS--LMG--SFLELQLLGFSDRSGIAELTVF 182
              +    S N+ V    + + +   L S G+    +G  S L   +   +    +  +T+ 
Sbjct:   199 TNKT--SNNEEVPVSIDWTRIVQLLSSNGFVPFAIGLHSVLNRIVNDHNHHKNLTGVTIL 256

Query:   183 APFDGVMMDYVGNVSEYSSLLLRHTVPC-KISWSDLVGFDDGDALKTFLNGFK-INVTR- 239
             A  + V +    + S +   ++RH +   ++++ D     D   +KT L+ ++ + +TR 
Sbjct:   257 ATPNLVSLS---SASPFLYEVVRHHILVQRLTYKDFASMSDKATVKT-LDPYQDLTITRR 312

Query:   240 ---SDGDDDLLMLNGVVISSPNLYYSDWLVVHGIHEVLAVP 277
                S G D   M++GV I  P+++ S   V+HGI   L +P
Sbjct:   313 NVNSSGGD--FMISGVEIVDPDMFSSSNFVIHGISHTLEIP 351

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM

GO:0006863 "purine nucleobase transport" evidence=RCA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	301
smart00554	97	smart00554, FAS1, Four repeated domains in the Fas	8e-08
pfam02469	123	pfam02469, Fasciclin, Fasciclin domain	4e-05
smart00554	97	smart00554, FAS1, Four repeated domains in the Fas	0.001

>gnl|CDD|214719 smart00554, FAS1, Four repeated domains in the Fasciclin I family of proteins, present in many other contexts

 Score = 48.9 bits (117), Expect = 8e-08
 Identities = 36/103 (34%), Positives = 52/103 (50%), Gaps = 11/103 (10%)

Query: 180 TVFAP----FDGVMMDYVG-NVSEYSSLLLRHTVPCKISWSDLVGFDDGDALKTFLNGFK 234
           TVFAP    F  +  D       +  +LLL H VP ++S +DL+   +G  L T L G K
Sbjct: 1   TVFAPTDEAFQKLPPDLNSLLADKLKNLLLYHVVPGRLSSADLL---NGGTLPT-LAGSK 56

Query: 235 INVTRSDGDDDLLMLNGVVISSPNLYYSDWLVVHGIHEVLAVP 277
           + +TRS G    + +NG  I   ++  ++  VVH I  VL  P
Sbjct: 57  LRITRS-GGSGTVTVNGARIVEADIAATN-GVVHVIDRVLLPP 97

Length = 97

>gnl|CDD|217054 pfam02469, Fasciclin, Fasciclin domain

 Score = 41.9 bits (99), Expect = 4e-05
 Identities = 29/110 (26%), Positives = 48/110 (43%), Gaps = 16/110 (14%)

Query: 173 RSGIAELTVFAPFDGVMMDY--------VGNVSEYSSLLLRHTVPCKISWSDLVGFDDGD 224
                  TVFAP D              + +  +  +LL  H VP +++ SDL    +G 
Sbjct: 20  NGSQGPFTVFAPTDEAFAKLPAGTLNFLLKDKEQLKNLLKYHVVPGRLTSSDLK---NGG 76

Query: 225 ALKTFLNGFKINVTRSDGDDDLLMLNGVVISSPNLYYSDWLVVHGIHEVL 274
            L T L G K+ V  + G    + +NG  +   ++  ++  V+H I +VL
Sbjct: 77  TLAT-LQGSKLRVNVTGGT---VTVNGARVVQSDIEATN-GVIHVIDKVL 121

This extracellular domain is found repeated four times in grasshopper fasciclin I as well as in proteins from mammals, sea urchins, plants, yeast and bacteria. Length = 123

>gnl|CDD|214719 smart00554, FAS1, Four repeated domains in the Fasciclin I family of proteins, present in many other contexts

 Score = 37.0 bits (86), Expect = 0.001
 Identities = 25/97 (25%), Positives = 39/97 (40%), Gaps = 13/97 (13%)

Query: 22  TIFSPSDSAF--VSSGQPSL------SLLEFHFSPLSLPLYSLKKLPCNSKIPTLSPSHS 73
           T+F+P+D AF  +     SL      +LL +H  P      S   L     +PTL+    
Sbjct: 1   TVFAPTDEAFQKLPPDLNSLLADKLKNLLLYHVVPG---RLSSADLLNGGTLPTLA-GSK 56

Query: 74  LVITSFPSDCNVSLKGVNLTHKPIYNDGLLVIYGINE 110
           L IT       V++ G  +    I      V++ I+ 
Sbjct: 57  LRITRSGGSGTVTVNGARIVEADIAATN-GVVHVIDR 92

Length = 97

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	301
COG2335	187	Secreted and surface protein containing fasciclin-	99.86
smart00554	99	FAS1 Four repeated domains in the Fasciclin I fami	99.8
KOG1437	682	consensus Fasciclin and related adhesion glycoprot	99.78
PF02469	128	Fasciclin: Fasciclin domain; InterPro: IPR000782 T	99.75
smart00554	99	FAS1 Four repeated domains in the Fasciclin I fami	99.73
COG2335	187	Secreted and surface protein containing fasciclin-	99.66
PF02469	128	Fasciclin: Fasciclin domain; InterPro: IPR000782 T	99.57
KOG1437	682	consensus Fasciclin and related adhesion glycoprot	99.55

>COG2335 Secreted and surface protein containing fasciclin-like repeats [Cell envelope biogenesis, outer membrane]

Probab=99.86  E-value=8.9e-22  Score=169.95  Aligned_cols=126  Identities=21%  Similarity=0.287  Sum_probs=101.4

Q ss_pred             HHHHHHHHhhc-ChHHHHHHHH-HhhcccccCCCCCceEEEecCCHHHhhccC----------ChHHHhcccccccccCc
Q 042280          144 FEEASGVLRSK-GYSLMGSFLE-LQLLGFSDRSGIAELTVFAPFDGVMMDYVG----------NVSEYSSLLLRHTVPCK  211 (301)
Q Consensus       144 ~~~~~~~L~~~-gfs~f~~~L~-~~l~~l~~~~~~~~~TvFAPtD~Af~~l~~----------~~~~l~~iL~yHVvp~~  211 (301)
                      -.++.+..... .|+++..++. +++-+.  +...|+||||||||+||.+++.          +...|..+|.||||+|+
T Consensus        47 ~~~iV~~a~~~~~f~tl~~a~~aa~Lv~~--L~~~gp~TVFaPtn~AFa~lp~~T~~~Ll~pen~~~L~~iLtYHVv~Gk  124 (187)
T COG2335          47 RADIVESAANNPSFTTLVAALKAAGLVDT--LNETGPFTVFAPTNEAFAKLPAGTLDALLKPENKPLLTKILTYHVVEGK  124 (187)
T ss_pred             hhHHHHHHccCcchHHHHHHHHhhhhHHH--hcCCCCeEEecCCHHHHHhCChhHHHHHhCccchhhhheeeEEEEEcCc
Confidence            35677766444 4999998884 333222  2335689999999999999853          45678899999999999


Q ss_pred             ccccccCCCCCCCceeeccCCcEEEEEEcCCCcccEEECcEEEeCCceeeeCCeEEEEEccccCCCCc
Q 042280          212 ISWSDLVGFDDGDALKTFLNGFKINVTRSDGDDDLLMLNGVVISSPNLYYSDWLVVHGIHEVLAVPAT  279 (301)
Q Consensus       212 l~~~dL~~~~~g~~l~Tll~g~~l~v~~~~~~~~~i~VNg~~I~~pDi~~~~~gVIHgId~VL~p~~~  279 (301)
                      ++.+++..   .....|+ +|..+.|...++   +++||++.|+.+|+.. +|||||+||+||+||..
T Consensus       125 ~~~~~l~~---~~~v~t~-~G~~~~i~~~~~---~~~Vn~a~v~~~di~a-~NgvIhvID~Vl~Pp~~  184 (187)
T COG2335         125 ITAADLKS---SGSVKTV-QGADLKIKVTGG---GVYVNDATVTIADINA-SNGVIHVIDKVLIPPMD  184 (187)
T ss_pred             ccHHHhhc---cccceee-cCceEEEEEcCC---cEEEeeeEEEeccEec-cCcEEEEEeeeccCCCc
Confidence            99999875   3347775 999999999988   8999999999999965 57999999999999864

>smart00554 FAS1 Four repeated domains in the Fasciclin I family of proteins, present in many other contexts

Probab=99.80  E-value=5e-20  Score=144.45  Aligned_cols=90  Identities=39%  Similarity=0.547  Sum_probs=77.4

Q ss_pred             EEEecCCHHHhhccCC-h-----H-HHhcccccccccCcccccccCCCCCCCceeeccCCcEEEEEEcC--CCcccEEEC
Q 042280          180 TVFAPFDGVMMDYVGN-V-----S-EYSSLLLRHTVPCKISWSDLVGFDDGDALKTFLNGFKINVTRSD--GDDDLLMLN  250 (301)
Q Consensus       180 TvFAPtD~Af~~l~~~-~-----~-~l~~iL~yHVvp~~l~~~dL~~~~~g~~l~Tll~g~~l~v~~~~--~~~~~i~VN  250 (301)
                      |+|||+|+||+++... .     + .++++|+|||+|++++.++|..   +..++|+ .|..|.+++.+  +   .+++|
T Consensus         1 TvfaP~d~Af~~~~~~~~~~l~~~~~l~~ll~~Hiv~~~~~~~~l~~---~~~~~Tl-~g~~l~v~~~~~~~---~i~in   73 (99)
T smart00554        1 TVFAPTDEAFQKLPPGTLNSLLADPKLKNLLLYHVVPGRLSSADLLN---GGTLPTL-AGSKLRVTRSGDSG---TVTVN   73 (99)
T ss_pred             CEeCcCHHHHHhcCHHHHHHHhCCHHHHHHHHhcEeCceEcHHHhcc---CCccccC-CCCEEEEEEeCCCC---eEEEc
Confidence            8999999999987431 1     1 6789999999999999998864   6779997 68899999877  5   89999


Q ss_pred             cEEEeCCceeeeCCeEEEEEccccCCC
Q 042280          251 GVVISSPNLYYSDWLVVHGIHEVLAVP  277 (301)
Q Consensus       251 g~~I~~pDi~~~~~gVIHgId~VL~p~  277 (301)
                      +++|+.+|+.++ ||+||+||+||.||
T Consensus        74 ~~~v~~~di~~~-nGvih~Id~vL~P~   99 (99)
T smart00554       74 GARIVEADIAAT-NGVVHVIDRVLLPP   99 (99)
T ss_pred             ceEEEECCEecC-CeEEEEECceeCCC
Confidence            999999999765 79999999999875

>KOG1437 consensus Fasciclin and related adhesion glycoproteins [Cell wall/membrane/envelope biogenesis; Extracellular structures]

Probab=99.78  E-value=1.7e-18  Score=174.89  Aligned_cols=219  Identities=18%  Similarity=0.125  Sum_probs=147.2

Q ss_pred             eEEEecCChhhhcCCC-CC----HHHhhhcccCCccCccccCCCCCCCcccccCCCceEEEEEeCCC-----CeEEEee-
Q 042280           21 LTIFSPSDSAFVSSGQ-PS----LSLLEFHFSPLSLPLYSLKKLPCNSKIPTLSPSHSLVITSFPSD-----CNVSLKG-   89 (301)
Q Consensus        21 ~TiFAPtd~Af~~~~~-~~----~~lL~yHiv~g~~~~~~L~~~~~~~~l~Tll~g~~l~vt~~~~~-----~~v~in~-   89 (301)
                      +|+|+|.|+||.+... ..    ..+|+|||++.++..+++.+.  ++.++|+ .+..+..-+++..     ..+.++| 
T Consensus       407 ~t~~lp~n~~fd~~~~~~~r~l~~qIL~~HII~~~~~~~~~y~~--~~~v~t~-g~~~l~~fv~r~~~s~~~t~i~~~~~  483 (682)
T KOG1437|consen  407 ATLLLPTNNLFDDLTPLESRRLAEQILYNHIIPEYLTSSSMYNG--QTTVRTL-GKNKLLYFVYRHSVSANVTDILIGNE  483 (682)
T ss_pred             eEEeeehhhhccCCChhhhHHHHHHHHHHhCcchhhhhhhhhcc--cceeecc-CCeEEEEEEecccccccceeeeccce
Confidence            7999999999998532 11    279999999999999998752  3367776 4556655555321     2344555 


Q ss_pred             EEEecCccc-cCCceEEEEeCCccCCCCCCCCCCCCCCCCCCCCCCccCCCchhhHHHHHHHHhhcC-hHHHHHHHHH-h
Q 042280           90 VNLTHKPIY-NDGLLVIYGINEFFNPGYGVSDSPFKTDQDAISPCGFSFNDSVNAFEEASGVLRSKG-YSLMGSFLEL-Q  166 (301)
Q Consensus        90 ~~I~~~di~-~ng~~vVH~Id~vL~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~g-fs~f~~~L~~-~  166 (301)
                      ++|...|+. .||  +||.||+|+.|.                              ++.+.|++.+ ++.+..+++. +
T Consensus       484 ~~Ii~aDi~~~nG--vvH~id~vl~p~------------------------------~l~~~l~~d~r~s~~~~~le~~~  531 (682)
T KOG1437|consen  484 ACIIEADISVKNG--VVHIIDRVLDPV------------------------------SLMEDLKTDGRISGTVQGLEGVL  531 (682)
T ss_pred             eeEEecccceecC--ceEEeeEEcCcc------------------------------cHHHHHhhccchhhhHHhhhhcC
Confidence            578899996 788  999999999992                              2344555544 6666666643 3


Q ss_pred             hcccccCCCCCceEEEecCCHHHhhccC------ChHHHhcccccccccCccc--ccccCCCCCCCceeeccCCcEEEEE
Q 042280          167 LLGFSDRSGIAELTVFAPFDGVMMDYVG------NVSEYSSLLLRHTVPCKIS--WSDLVGFDDGDALKTFLNGFKINVT  238 (301)
Q Consensus       167 l~~l~~~~~~~~~TvFAPtD~Af~~l~~------~~~~l~~iL~yHVvp~~l~--~~dL~~~~~g~~l~Tll~g~~l~v~  238 (301)
                      +.+..  ...+.+|+|+|||+||.+...      ....|.+++.||++++...  ..+...-..+ .+-+. .|..+.+.
T Consensus       532 l~e~l--~~~~~~t~fvPt~ka~~~~~~~~~~~~~~~~l~~~l~yH~v~~~~~ls~~~~~~v~~~-~k~s~-~~~~~~~~  607 (682)
T KOG1437|consen  532 LPEEL--TPEGNYTLFVPTNKAWQKSTKDEKSLFHKKALQDFLKYHLVPGQSRLSLGSSPYVMIQ-VKLSL-RGDHLFFS  607 (682)
T ss_pred             Chhhh--ccCCceEEEeecccccccCCcchhhcchHHHHHHHHHhccccceeeeecccccceeee-eeEEE-ecccEEee
Confidence            32211  223459999999999997643      3356889999999998653  1211100000 11122 34444454


Q ss_pred             EcCCCcccEEECcEEEeCCceeeeCCeEEEEEccccCCCCcchh
Q 042280          239 RSDGDDDLLMLNGVVISSPNLYYSDWLVVHGIHEVLAVPATTKE  282 (301)
Q Consensus       239 ~~~~~~~~i~VNg~~I~~pDi~~~~~gVIHgId~VL~p~~~~~~  282 (301)
                      ....   ...+|-.+++..|++.. ||++|.||.||.|+.....
T Consensus       608 ~~~~---~~~vn~e~~~~~~i~~~-n~~~h~i~~vl~p~~l~~~  647 (682)
T KOG1437|consen  608 LVNP---RGDVNKERLVGIDIMGT-NGVVHVIDLVLKPPDLPFL  647 (682)
T ss_pred             eecc---ccceeeeeeeccceeee-cceeEEEEEEcccCcchhh
Confidence            4444   56778889999999754 7899999999999865443

>PF02469 Fasciclin: Fasciclin domain; InterPro: IPR000782 The FAS1 (fasciclin-like) domain is an extracellular module of about 140 amino acid residues

Probab=99.75  E-value=1e-18  Score=142.68  Aligned_cols=113  Identities=34%  Similarity=0.443  Sum_probs=84.4

Q ss_pred             ChHHHHHHHH-Hhhcccc-cCCCCCceEEEecCCHHHhhcc--------CChHHHhcccccccccCcccccccCCCCCC-
Q 042280          155 GYSLMGSFLE-LQLLGFS-DRSGIAELTVFAPFDGVMMDYV--------GNVSEYSSLLLRHTVPCKISWSDLVGFDDG-  223 (301)
Q Consensus       155 gfs~f~~~L~-~~l~~l~-~~~~~~~~TvFAPtD~Af~~l~--------~~~~~l~~iL~yHVvp~~l~~~dL~~~~~g-  223 (301)
                      +|+.|..+++ ..+.... +.  .+.+|||||+|+||+++.        ...+.++++|+|||+++.++.++|..   + 
T Consensus         2 ~~s~f~~~l~~~~l~~~l~~~--~~~~TvfaP~d~a~~~~~~~~~~~~~~~~~~l~~~l~~hiv~~~~~~~~l~~---~~   76 (128)
T PF02469_consen    2 DLSTFSRLLEQAGLADLLNDS--DGNYTVFAPTDDAFQKLSQETNSSLADSKEQLKSLLKYHIVPGSITSSDLRN---GK   76 (128)
T ss_dssp             TTHHHHHHHHHTTCHHHHGCS--SSSEEEEEE-HHHHHHSHHHHHHHHHTHHHHHHHHHHHTEEES---HCHHHC---HH
T ss_pred             CHHHHHHHHHHcCCHHHHhcC--CCCEEEEEECHHHHHhccccccchhhhhhhhHhhhhhhEEEcCceehhhhcc---cc
Confidence            4778888884 4443222 22  235999999999998762        13466889999999999998888874   4 


Q ss_pred             CceeeccCCcEEEEEEc--CCCcccEEECc-EEEeCCceeeeCCeEEEEEccccCC
Q 042280          224 DALKTFLNGFKINVTRS--DGDDDLLMLNG-VVISSPNLYYSDWLVVHGIHEVLAV  276 (301)
Q Consensus       224 ~~l~Tll~g~~l~v~~~--~~~~~~i~VNg-~~I~~pDi~~~~~gVIHgId~VL~p  276 (301)
                      ..++|++.|..+.|+..  ++   .++||+ ++|+.+|+.+ .||+||.||+||.|
T Consensus        77 ~~~~t~~~g~~~~v~~~~~~~---~~~v~~~a~i~~~~~~~-~nG~ih~id~vL~P  128 (128)
T PF02469_consen   77 QTLETLLNGQPLRVSSSPSNG---TIYVNGKARIVKSDIEA-SNGVIHIIDDVLIP  128 (128)
T ss_dssp             EEEEBSSTTCEEEEEEEGGTT---EEEECCEEEESEEEEEE-SSEEEEEESS-TSS
T ss_pred             ccceeccCCCEEEEEEEecCC---ceEecCceEEEeCCEEe-CCEEEEEECceECc
Confidence            57888568999999887  44   899999 9999999965 57999999999976

It has been suggested that the FAS1 domain represents an ancient cell adhesion domain common to plants and animals []; related FAS1 domains are also found in bacteria []. The crystal structure of FAS1 domains 3 and 4 of fasciclin I from Drosophila melanogaster (Fruit fly) has been determined, revealing a novel domain fold consisting of a seven-stranded beta wedge and at least five alpha helices; two well-ordered N-acetylglucosamine groups attached to a conserved asparagine are located in the interface region between the two FAS1 domains []. Fasciclin I is an insect neural cell adhesion molecule involved in axonal guidance that is attached to the membrane by a GPI-anchored protein. FAS1 domains are present in many secreted and membrane-anchored proteins. These proteins are usually GPI anchored and consist of: (i) a single FAS1 domain, (ii) a tandem array of FAS1 domains, or (iii) FAS1 domain(s) interspersed with other domains. Proteins known to contain a FAS1 domain include: Fasciclin I (4 FAS1 domains). Human TGF-beta induced Ig-H3 (BIgH3) protein (4 FAS1 domains), where the FAS1 domains mediate cell adhesion through an interaction with alpha3/beta1 integrin; mutation in the FAS1 domains result in corneal dystrophy []. Volvox major cell adhesion protein (2 FAS1 domains) []. Arabidopsis fasciclin-like arabinogalactan proteins (2 FAS1 domains) []. Mammalian stabilin protein, a family of fasciclin-like hyaluronan receptor homologues (7 FAS1 domains)[]. Human extracellular matrix protein periostin (4 FAS1 domains). Bacterial immunogenic protein MPT70 (1 FAS1 domain) []. The FAS1 domains of both human periostin (Q15063 from SWISSPROT) and BIgH3 (Q15582 from SWISSPROT) proteins were found to contain vitamin K-dependent gamma-carboxyglutamate residues []. Gamma-carboxyglutamate residues are more commonly associated with GLA domains (IPR000294 from INTERPRO), where they occur through post-translational modification catalysed by the vitamin K-dependent enzyme gamma-glutamylcarboxylase.; PDB: 1O70_A 1W7D_A 1W7E_A 1NYO_A 1X3B_A 2VXP_A.

>smart00554 FAS1 Four repeated domains in the Fasciclin I family of proteins, present in many other contexts

Probab=99.73  E-value=5.8e-18  Score=132.69  Aligned_cols=88  Identities=28%  Similarity=0.452  Sum_probs=74.7

Q ss_pred             EEEecCChhhhcCCCC---------CH-HHhhhcccCCccCccccCCCCCCCcccccCCCceEEEEEeCCCCeEEEeeEE
Q 042280           22 TIFSPSDSAFVSSGQP---------SL-SLLEFHFSPLSLPLYSLKKLPCNSKIPTLSPSHSLVITSFPSDCNVSLKGVN   91 (301)
Q Consensus        22 TiFAPtd~Af~~~~~~---------~~-~lL~yHiv~g~~~~~~L~~~~~~~~l~Tll~g~~l~vt~~~~~~~v~in~~~   91 (301)
                      |+|||+|+||+++...         .+ ++|+||+++++++.++|.+   +..++|+. |..|+++..++.+.+++|+++
T Consensus         1 TvfaP~d~Af~~~~~~~~~~l~~~~~l~~ll~~Hiv~~~~~~~~l~~---~~~~~Tl~-g~~l~v~~~~~~~~i~in~~~   76 (99)
T smart00554        1 TVFAPTDEAFQKLPPGTLNSLLADPKLKNLLLYHVVPGRLSSADLLN---GGTLPTLA-GSKLRVTRSGDSGTVTVNGAR   76 (99)
T ss_pred             CEeCcCHHHHHhcCHHHHHHHhCCHHHHHHHHhcEeCceEcHHHhcc---CCccccCC-CCEEEEEEeCCCCeEEEcceE
Confidence            8999999999987531         22 8999999999999999975   56788885 889999987433789999999


Q ss_pred             EecCccc-cCCceEEEEeCCccCCC
Q 042280           92 LTHKPIY-NDGLLVIYGINEFFNPG  115 (301)
Q Consensus        92 I~~~di~-~ng~~vVH~Id~vL~P~  115 (301)
                      |+.+|+. .||  +||+||+||.|+
T Consensus        77 v~~~di~~~nG--vih~Id~vL~P~   99 (99)
T smart00554       77 IVEADIAATNG--VVHVIDRVLLPP   99 (99)
T ss_pred             EEECCEecCCe--EEEEECceeCCC
Confidence            9999996 666  999999999985

>COG2335 Secreted and surface protein containing fasciclin-like repeats [Cell envelope biogenesis, outer membrane]

Probab=99.66  E-value=1.3e-16  Score=137.99  Aligned_cols=91  Identities=25%  Similarity=0.411  Sum_probs=75.6

Q ss_pred             CCCCceEEEecCChhhhcCCC--------CC----H-HHhhhcccCCccCccccCCCCCCCcccccCCCceEEEEEeCCC
Q 042280           16 HHSPFLTIFSPSDSAFVSSGQ--------PS----L-SLLEFHFSPLSLPLYSLKKLPCNSKIPTLSPSHSLVITSFPSD   82 (301)
Q Consensus        16 ~~~~~~TiFAPtd~Af~~~~~--------~~----~-~lL~yHiv~g~~~~~~L~~~~~~~~l~Tll~g~~l~vt~~~~~   82 (301)
                      +.++ ||||||+|+||.+++.        |.    + .+|.|||++|+++.+++.+.   ..+.|+ .|..++|...  +
T Consensus        78 ~~gp-~TVFaPtn~AFa~lp~~T~~~Ll~pen~~~L~~iLtYHVv~Gk~~~~~l~~~---~~v~t~-~G~~~~i~~~--~  150 (187)
T COG2335          78 ETGP-FTVFAPTNEAFAKLPAGTLDALLKPENKPLLTKILTYHVVEGKITAADLKSS---GSVKTV-QGADLKIKVT--G  150 (187)
T ss_pred             CCCC-eEEecCCHHHHHhCChhHHHHHhCccchhhhheeeEEEEEcCcccHHHhhcc---ccceee-cCceEEEEEc--C
Confidence            3555 5999999999999752        22    2 79999999999999999863   346665 7999999886  3


Q ss_pred             CeEEEeeEEEecCccc-cCCceEEEEeCCccCCC
Q 042280           83 CNVSLKGVNLTHKPIY-NDGLLVIYGINEFFNPG  115 (301)
Q Consensus        83 ~~v~in~~~I~~~di~-~ng~~vVH~Id~vL~P~  115 (301)
                      ++++||+++|+..|+. +||  +||+||+||.|+
T Consensus       151 ~~~~Vn~a~v~~~di~a~Ng--vIhvID~Vl~Pp  182 (187)
T COG2335         151 GGVYVNDATVTIADINASNG--VIHVIDKVLIPP  182 (187)
T ss_pred             CcEEEeeeEEEeccEeccCc--EEEEEeeeccCC
Confidence            4499999999999995 888  999999999998

>PF02469 Fasciclin: Fasciclin domain; InterPro: IPR000782 The FAS1 (fasciclin-like) domain is an extracellular module of about 140 amino acid residues

Probab=99.57  E-value=9.2e-16  Score=125.13  Aligned_cols=94  Identities=30%  Similarity=0.476  Sum_probs=72.3

Q ss_pred             CCCceEEEecCChhhhcCCC--------C--CH-HHhhhcccCCccCccccCCCCCCCcccccCCCceEEEEEeCCCCeE
Q 042280           17 HSPFLTIFSPSDSAFVSSGQ--------P--SL-SLLEFHFSPLSLPLYSLKKLPCNSKIPTLSPSHSLVITSFPSDCNV   85 (301)
Q Consensus        17 ~~~~~TiFAPtd~Af~~~~~--------~--~~-~lL~yHiv~g~~~~~~L~~~~~~~~l~Tll~g~~l~vt~~~~~~~v   85 (301)
                      ....+|||||+|+||.+++.        +  .+ .+|+||++++.++.++|...  ...+.|.+.|..++|+.+.+++.+
T Consensus        22 ~~~~~TvfaP~d~a~~~~~~~~~~~~~~~~~~l~~~l~~hiv~~~~~~~~l~~~--~~~~~t~~~g~~~~v~~~~~~~~~   99 (128)
T PF02469_consen   22 SDGNYTVFAPTDDAFQKLSQETNSSLADSKEQLKSLLKYHIVPGSITSSDLRNG--KQTLETLLNGQPLRVSSSPSNGTI   99 (128)
T ss_dssp             SSSSEEEEEE-HHHHHHSHHHHHHHHHTHHHHHHHHHHHTEEES---HCHHHCH--HEEEEBSSTTCEEEEEEEGGTTEE
T ss_pred             CCCCEEEEEECHHHHHhccccccchhhhhhhhHhhhhhhEEEcCceehhhhccc--cccceeccCCCEEEEEEEecCCce
Confidence            44578999999999987631        1  12 89999999999999998852  156888668999999988446789


Q ss_pred             EEee-EEEecCccc-cCCceEEEEeCCccCC
Q 042280           86 SLKG-VNLTHKPIY-NDGLLVIYGINEFFNP  114 (301)
Q Consensus        86 ~in~-~~I~~~di~-~ng~~vVH~Id~vL~P  114 (301)
                      ++|+ ++|+..|+. .||  +||+||+||.|
T Consensus       100 ~v~~~a~i~~~~~~~~nG--~ih~id~vL~P  128 (128)
T PF02469_consen  100 YVNGKARIVKSDIEASNG--VIHIIDDVLIP  128 (128)
T ss_dssp             EECCEEEESEEEEEESSE--EEEEESS-TSS
T ss_pred             EecCceEEEeCCEEeCCE--EEEEECceECc
Confidence            9999 999999995 677  99999999988

It has been suggested that the FAS1 domain represents an ancient cell adhesion domain common to plants and animals []; related FAS1 domains are also found in bacteria []. The crystal structure of FAS1 domains 3 and 4 of fasciclin I from Drosophila melanogaster (Fruit fly) has been determined, revealing a novel domain fold consisting of a seven-stranded beta wedge and at least five alpha helices; two well-ordered N-acetylglucosamine groups attached to a conserved asparagine are located in the interface region between the two FAS1 domains []. Fasciclin I is an insect neural cell adhesion molecule involved in axonal guidance that is attached to the membrane by a GPI-anchored protein. FAS1 domains are present in many secreted and membrane-anchored proteins. These proteins are usually GPI anchored and consist of: (i) a single FAS1 domain, (ii) a tandem array of FAS1 domains, or (iii) FAS1 domain(s) interspersed with other domains. Proteins known to contain a FAS1 domain include: Fasciclin I (4 FAS1 domains). Human TGF-beta induced Ig-H3 (BIgH3) protein (4 FAS1 domains), where the FAS1 domains mediate cell adhesion through an interaction with alpha3/beta1 integrin; mutation in the FAS1 domains result in corneal dystrophy []. Volvox major cell adhesion protein (2 FAS1 domains) []. Arabidopsis fasciclin-like arabinogalactan proteins (2 FAS1 domains) []. Mammalian stabilin protein, a family of fasciclin-like hyaluronan receptor homologues (7 FAS1 domains)[]. Human extracellular matrix protein periostin (4 FAS1 domains). Bacterial immunogenic protein MPT70 (1 FAS1 domain) []. The FAS1 domains of both human periostin (Q15063 from SWISSPROT) and BIgH3 (Q15582 from SWISSPROT) proteins were found to contain vitamin K-dependent gamma-carboxyglutamate residues []. Gamma-carboxyglutamate residues are more commonly associated with GLA domains (IPR000294 from INTERPRO), where they occur through post-translational modification catalysed by the vitamin K-dependent enzyme gamma-glutamylcarboxylase.; PDB: 1O70_A 1W7D_A 1W7E_A 1NYO_A 1X3B_A 2VXP_A.

>KOG1437 consensus Fasciclin and related adhesion glycoproteins [Cell wall/membrane/envelope biogenesis; Extracellular structures]

Probab=99.55  E-value=3.3e-14  Score=144.03  Aligned_cols=231  Identities=16%  Similarity=0.191  Sum_probs=141.8

Q ss_pred             eEEEecCChhhhcCCCCCH-HHhhhcccCCccCccccCCCCCCCcccccCC-------CceEEEEEeCCCCeEEEeeEEE
Q 042280           21 LTIFSPSDSAFVSSGQPSL-SLLEFHFSPLSLPLYSLKKLPCNSKIPTLSP-------SHSLVITSFPSDCNVSLKGVNL   92 (301)
Q Consensus        21 ~TiFAPtd~Af~~~~~~~~-~lL~yHiv~g~~~~~~L~~~~~~~~l~Tll~-------g~~l~vt~~~~~~~v~in~~~I   92 (301)
                      .|++||+|+||.+.+.... .++.||.+.|.+......+   .....+.+.       ++...+....++....+||..+
T Consensus       273 rt~~a~tn~a~~~ip~~~~~~~~~~~~v~~~~~~~~i~~---~~~~~~s~~~~~~r~~~~~~~~a~g~~g~~~~~ng~~~  349 (682)
T KOG1437|consen  273 RTHLAPTNEAFFTIPRGYPPRILGYHLVLGNLKYNHILD---NMKLGPSLAPGTVRLTGEGVAIAPGSSGERYHINGRAI  349 (682)
T ss_pred             ccccccCcchhhcccccCCCcccccccchhhhhhhhhcc---cccccccccccceeeccccccccccCCCceEEeeccee
Confidence            5899999999977643332 5677888877765554442   111111111       1222222222345678898776


Q ss_pred             ecCcccc-CCceEEEEeCCccCCCCCCCCCCCCCCCCCCCCCCccCCCchhhHHHHHHHHhhcChHHHHHHHHH-hh-cc
Q 042280           93 THKPIYN-DGLLVIYGINEFFNPGYGVSDSPFKTDQDAISPCGFSFNDSVNAFEEASGVLRSKGYSLMGSFLEL-QL-LG  169 (301)
Q Consensus        93 ~~~di~~-ng~~vVH~Id~vL~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gfs~f~~~L~~-~l-~~  169 (301)
                      +..|... +|  +||.||.++.|+..                           +.+++..+.+.-+++..++.. .+ .-
T Consensus       350 I~kd~i~~~~--~lh~id~~l~p~~~---------------------------~~l~~La~e~~~st~~rlv~elgll~~  400 (682)
T KOG1437|consen  350 IQKDFIHTNG--LLHYIDYVLEPDSL---------------------------KNLMSLAREDEISTSMRLVAELGLLTA  400 (682)
T ss_pred             EEEeeeccce--EEEEcccccCCchH---------------------------HHHHHHHhcccccHHHHHHHhccceEE
Confidence            6677764 45  99999999998622                           245565555444555444422 12 21


Q ss_pred             cccCCCCCceEEEecCCHHHhhccCCh--HHHhcccccccccCcccccccCCCCCCCceeeccCCcEEEEEE--cCCCc-
Q 042280          170 FSDRSGIAELTVFAPFDGVMMDYVGNV--SEYSSLLLRHTVPCKISWSDLVGFDDGDALKTFLNGFKINVTR--SDGDD-  244 (301)
Q Consensus       170 l~~~~~~~~~TvFAPtD~Af~~l~~~~--~~l~~iL~yHVvp~~l~~~dL~~~~~g~~l~Tll~g~~l~v~~--~~~~~-  244 (301)
                      +..  +. .+|+|+|+|+||+.+....  ..++.+|+|||+|.++..+++..  .++.++|+ ++..+..-.  ..+.+ 
T Consensus       401 L~~--n~-e~t~~lp~n~~fd~~~~~~~r~l~~qIL~~HII~~~~~~~~~y~--~~~~v~t~-g~~~l~~fv~r~~~s~~  474 (682)
T KOG1437|consen  401 LAP--ND-EATLLLPTNNLFDDLTPLESRRLAEQILYNHIIPEYLTSSSMYN--GQTTVRTL-GKNKLLYFVYRHSVSAN  474 (682)
T ss_pred             EcC--CC-ceEEeeehhhhccCCChhhhHHHHHHHHHHhCcchhhhhhhhhc--ccceeecc-CCeEEEEEEeccccccc
Confidence            222  22 3999999999999864321  22579999999999999888763  23377786 665543332  22211 


Q ss_pred             -ccEEECc-EEEeCCceeeeCCeEEEEEccccCCCCcchhhhhccCCCC
Q 042280          245 -DLLMLNG-VVISSPNLYYSDWLVVHGIHEVLAVPATTKEATESSSQMG  291 (301)
Q Consensus       245 -~~i~VNg-~~I~~pDi~~~~~gVIHgId~VL~p~~~~~~~~~~~~~~~  291 (301)
                       ..+.+++ +.|...|+.. .+|++|.||+||.| ...-+..+.++.++
T Consensus       475 ~t~i~~~~~~~Ii~aDi~~-~nGvvH~id~vl~p-~~l~~~l~~d~r~s  521 (682)
T KOG1437|consen  475 VTDILIGNEACIIEADISV-KNGVVHIIDRVLDP-VSLMEDLKTDGRIS  521 (682)
T ss_pred             ceeeeccceeeEEecccce-ecCceEEeeEEcCc-ccHHHHHhhccchh
Confidence             2466666 5688999975 57899999999976 33333444444333

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	301
2vxp_A	132	Transforming growth factor-beta-induced protein IG	3e-06
1nyo_A	163	Immunogenic protein MPT70; seven-stranded beta-bar	5e-05
1w7d_A	137	Fasciclin-like protein; cell adhesion; NMR {Rhodob	2e-04

>2vxp_A Transforming growth factor-beta-induced protein IG-H3; RGD-containing collagen-associated protein, FAS1, BIGH3, vision, amyloid, RGD-CAP, secreted; 2.5A {Homo sapiens} PDB: 1x3b_A Length = 132

 Score = 45.0 bits (107), Expect = 3e-06
 Identities = 23/109 (21%), Positives = 44/109 (40%), Gaps = 16/109 (14%)

Query: 174 SGIAELTVFAPFD--------GVMMDYVGNVSEYSSLLLRHTVPCKISWSDLVGFDDGDA 225
           +     TVFAP +              +G+  E +++L  H     +    +        
Sbjct: 31  NREGVYTVFAPTNEAFRALPPRERSRLLGDAKELANILKYHIGDEILVSGGIG---ALVR 87

Query: 226 LKTFLNGFKINVTRSDGDDDLLMLNGVVISSPNLYYSDWLVVHGIHEVL 274
           LK+ L G K+ V+  +     + +N   ++ P++  ++  VVH I  VL
Sbjct: 88  LKS-LQGDKLEVSLKNNV---VSVNKEPVAEPDIMATNG-VVHVITNVL 131

>1nyo_A Immunogenic protein MPT70; seven-stranded beta-barrel, fasciclin domain, structural genomics, PSI, protein structure initiative; NMR {Mycobacterium tuberculosis} SCOP: b.118.1.1 Length = 163

 Score = 42.0 bits (99), Expect = 5e-05
 Identities = 25/109 (22%), Positives = 43/109 (39%), Gaps = 18/109 (16%)

Query: 178 ELTVFAP----FDGVMMDYVGNVSEY----SSLLLRHTVPCKISWSDLVGFDDGDALKTF 229
           + TVFAP    F  +    +  +       +S+L  H V  + S +++VG       +T 
Sbjct: 65  QYTVFAPTNAAFSKLPASTIDELKTNSSLLTSILTYHVVAGQTSPANVVG-----TRQT- 118

Query: 230 LNGFKINVTRSDGDDDLLMLNGVVISSPNLYYSDWLVVHGIHEVLAVPA 278
           L G  + VT        L +    +    +  ++   V+ I  VL  PA
Sbjct: 119 LQGASVTVTGQGNS---LKVGNADVVCGGVSTAN-ATVYMIDSVLMPPA 163

>1w7d_A Fasciclin-like protein; cell adhesion; NMR {Rhodobacter sphaeroides} PDB: 1w7e_A Length = 137

 Score = 40.0 bits (94), Expect = 2e-04
 Identities = 34/111 (30%), Positives = 49/111 (44%), Gaps = 19/111 (17%)

Query: 174 SGIAELTVFAP----FDGVMMDYV------GNVSEYSSLLLRHTVPCKISWSDLVGFDDG 223
            G    TVFAP    F  +    V       N  + + +L  H VP ++  SDL    +G
Sbjct: 32  KGDGPFTVFAPTDAAFAALPEGTVEDLLKPENKEKLTEILTYHVVPGEVMSSDLT---EG 88

Query: 224 DALKTFLNGFKINVTRSDGDDDLLMLNGVVISSPNLYYSDWLVVHGIHEVL 274
              +T + G  + VT   G      +NGV IS P++  S+  V+H I  VL
Sbjct: 89  MTAET-VEGGALTVTLEGG----PKVNGVSISQPDVDASN-GVIHVIDGVL 133

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	301
1o70_A	324	Fasciclin I, FAS I, FCN; cell adhesion, AXON guida	100.0
2vxp_A	132	Transforming growth factor-beta-induced protein IG	99.89
1w7d_A	137	Fasciclin-like protein; cell adhesion; NMR {Rhodob	99.89
1nyo_A	163	Immunogenic protein MPT70; seven-stranded beta-bar	99.88
1w7d_A	137	Fasciclin-like protein; cell adhesion; NMR {Rhodob	99.73
1o70_A	324	Fasciclin I, FAS I, FCN; cell adhesion, AXON guida	99.7
2vxp_A	132	Transforming growth factor-beta-induced protein IG	99.68
1nyo_A	163	Immunogenic protein MPT70; seven-stranded beta-bar	99.67

>1o70_A Fasciclin I, FAS I, FCN; cell adhesion, AXON guidance, extracellular module, genetic disorder, corneal dystrophy; HET: NAG; 2.6A {Drosophila melanogaster} SCOP: b.118.1.1 b.118.1.1

Probab=100.00  E-value=3e-37  Score=289.96  Aligned_cols=229  Identities=20%  Similarity=0.240  Sum_probs=166.2

Q ss_pred             CceEEEecCChhhhcCCCCC-------H-HHhhhcccCCccCccccCCCCCC--CcccccCCCceEEEEEeCC--CCeEE
Q 042280           19 PFLTIFSPSDSAFVSSGQPS-------L-SLLEFHFSPLSLPLYSLKKLPCN--SKIPTLSPSHSLVITSFPS--DCNVS   86 (301)
Q Consensus        19 ~~~TiFAPtd~Af~~~~~~~-------~-~lL~yHiv~g~~~~~~L~~~~~~--~~l~Tll~g~~l~vt~~~~--~~~v~   86 (301)
                      +.+|||||+|+||.+.....       + ++|+|||++|+++.++|.+...+  ..++|+..+..++++.+++  ++.++
T Consensus        46 ~~~TvFAPtn~Af~~~~~~~l~~~~~~l~~iL~yHvv~g~~~~~~l~~~~~~~~~~~~Tl~g~~~l~~~v~~~~~~~~v~  125 (324)
T 1o70_A           46 TEVTILAPSNEAWNSSNINNVLRDRNKMRQILNMHIIKDRLNVDKIRQKNANLIAQVPTVNNNTFLYFNVRGEGSDTVIT  125 (324)
T ss_dssp             SSEEEEEECHHHHHHTCTHHHHTCHHHHHHHHHHTEESSCCCHHHHHHHTSSSCCCEEBSSTTCEEEEEEESCGGGCEEE
T ss_pred             CCeEEEEEChHhhhcccHhhhhCCHHHHHHHHHhcEeCCeecHHHHhhccCCCceEEEcCCCCceEEEEEeecCCceEEE
Confidence            45799999999998753211       2 89999999999999998754211  1678886444477776632  35688


Q ss_pred             Eee----EEEecCccc-cCCceEEEEeCCccCCCCCCCCCCCCCCCCCCCCCCccCCCchhhHHHHHHHHhhc-ChHHHH
Q 042280           87 LKG----VNLTHKPIY-NDGLLVIYGINEFFNPGYGVSDSPFKTDQDAISPCGFSFNDSVNAFEEASGVLRSK-GYSLMG  160 (301)
Q Consensus        87 in~----~~I~~~di~-~ng~~vVH~Id~vL~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~-gfs~f~  160 (301)
                      +||    ++|+.+|+. +||  +||+||+||.|+..                            ++.+.|+.. .|++|.
T Consensus       126 v~~g~~~a~v~~~di~~~NG--vIhvID~VL~pp~~----------------------------ti~~~l~~~~~fs~~~  175 (324)
T 1o70_A          126 VEGGGVNATVIQADVAQTNG--YVHIIDHVLGVPYT----------------------------TVLGKLESDPMMSDTY  175 (324)
T ss_dssp             EEETTEEEEEEEEEEECSSE--EEEEESSCTTSCCS----------------------------CHHHHHHHCGGGHHHH
T ss_pred             EcCCceeEEEEeccccccCc--EEEEEchhhhhchh----------------------------hHHHHhhcCchHHHHH
Confidence            885    899999995 788  99999999998721                            456777764 599998


Q ss_pred             HHHH-HhhcccccCCCCCceEEEecCCHHHhhcc------------CCh-HHHhcccccccccC--cccccccCCCCC--
Q 042280          161 SFLE-LQLLGFSDRSGIAELTVFAPFDGVMMDYV------------GNV-SEYSSLLLRHTVPC--KISWSDLVGFDD--  222 (301)
Q Consensus       161 ~~L~-~~l~~l~~~~~~~~~TvFAPtD~Af~~l~------------~~~-~~l~~iL~yHVvp~--~l~~~dL~~~~~--  222 (301)
                      .++. +++.+..+. ..++||||||+|+||+++.            .+. +.|+++|+|||+|+  .++.++|.....  
T Consensus       176 ~~l~~~gl~~~L~~-~~~~~TvFAPtd~Af~~l~~~~~~~~~~~l~~~~~~~l~~iL~yHvv~~~~~~~~~~l~~~~~~~  254 (324)
T 1o70_A          176 KMGKFSHFNDQLNN-TQRRFTYFVPRDKGWQKTELDYPSAHKKLFMADFSYHSKSILERHLAISDKEYTMKDLVKFSQES  254 (324)
T ss_dssp             HHTTTTTTTGGGGC-SSSEEEEEEECHHHHHHHHHHCHHHHHHHTSGGGHHHHHHHHHTTEEEESSCCCHHHHHHHHHHS
T ss_pred             HHHHhhCHHHHhCC-CCCCeEEEEeChHHHHhhhhhchhHHHHHhccCcHHHHHHHHHhcEeCCcceEcHHHHhhhccCC
Confidence            8873 334322211 2457999999999999872            122 37899999999998  677688864211  


Q ss_pred             C-CceeeccCCcEEEEEE--cCCCcccEEEC----cEEEeCCceeeeCCeEEEEEccccCCCCcchhhh
Q 042280          223 G-DALKTFLNGFKINVTR--SDGDDDLLMLN----GVVISSPNLYYSDWLVVHGIHEVLAVPATTKEAT  284 (301)
Q Consensus       223 g-~~l~Tll~g~~l~v~~--~~~~~~~i~VN----g~~I~~pDi~~~~~gVIHgId~VL~p~~~~~~~~  284 (301)
                      + ..++|+ . ..+.|+.  .++   .++||    +++|+.+|+.+ .|||||+||+||.|++.....+
T Consensus       255 ~~~~~~Tl-~-~~l~v~~~~~~~---~v~v~~~~~~a~v~~~di~~-~NGvIHvID~VL~P~~~~~~~g  317 (324)
T 1o70_A          255 GSVILPTF-R-DSLSIRVEEEAG---RYVIIWNYKKINVYRPDVEC-TNGIIHVIDYPLLEEKDVVVAG  317 (324)
T ss_dssp             SSEEEECS-S-SEEEEEEEEETT---EEEEEETTEEEEEEEEEEEE-TTEEEEEESSCSCCTTTTC---
T ss_pred             Ceeeeecc-C-CcEEEEEEecCC---EEEEEecCceeEEEEccccc-CCCeEEEeceeecCCcccccCC
Confidence            1 137887 4 6777765  455   78887    79999999975 5799999999999988754433

>2vxp_A Transforming growth factor-beta-induced protein IG-H3; RGD-containing collagen-associated protein, FAS1, BIGH3, vision, amyloid, RGD-CAP, secreted; 2.5A {Homo sapiens} PDB: 1x3b_A

Probab=99.89  E-value=7.6e-24  Score=174.50  Aligned_cols=120  Identities=21%  Similarity=0.243  Sum_probs=96.5

Q ss_pred             HHHHHHhhc-ChHHHHHHHH-HhhcccccCCCCCceEEEecCCHHHhhccC--------ChHHHhcccccccccCccccc
Q 042280          146 EASGVLRSK-GYSLMGSFLE-LQLLGFSDRSGIAELTVFAPFDGVMMDYVG--------NVSEYSSLLLRHTVPCKISWS  215 (301)
Q Consensus       146 ~~~~~L~~~-gfs~f~~~L~-~~l~~l~~~~~~~~~TvFAPtD~Af~~l~~--------~~~~l~~iL~yHVvp~~l~~~  215 (301)
                      ++.+.|+.. .|++|..++. +++.+..+  +.++||||||+|+||++++.        +.+.|+++|+|||+|+.++.+
T Consensus         3 ti~~~l~~~~~fs~~~~~l~~agl~~~L~--~~~~~TvFAPtn~Af~~l~~~~~~~l~~~~~~l~~iL~yHvv~~~~~~~   80 (132)
T 2vxp_A            3 TVMDVLKGDNRFSMLVAAIQSAGLTETLN--REGVYTVFAPTNEAFRALPPRERSRLLGDAKELANILKYHIGDEILVSG   80 (132)
T ss_dssp             CHHHHHTTSTTCHHHHHHHHHHTCHHHHH--SSCCEEEEEECHHHHHHSCHHHHHHHHTCHHHHHHHHHHSBBSSCCCST
T ss_pred             cHHHHHHcCCCHHHHHHHHHHcCcHHHHc--CCCCEEEEeECHHHHHhhCHHHHHHHhcCHHHHHHHHHhcCcCceeehh
Confidence            577888864 5999999994 44433222  23579999999999999842        567788999999999998877


Q ss_pred             ccCCCCCCCceeeccCCcEEEEEEcCCCcccEEECcEEEeCCceeeeCCeEEEEEccccC
Q 042280          216 DLVGFDDGDALKTFLNGFKINVTRSDGDDDLLMLNGVVISSPNLYYSDWLVVHGIHEVLA  275 (301)
Q Consensus       216 dL~~~~~g~~l~Tll~g~~l~v~~~~~~~~~i~VNg~~I~~pDi~~~~~gVIHgId~VL~  275 (301)
                      ++.   .+..++|+ .|..|.|+..++   .++||+++|+.+|+.+ .|||||+||+||.
T Consensus        81 ~l~---~~~~~~tl-~G~~l~v~~~~~---~v~vn~a~v~~~di~a-~NGvIHvID~VLl  132 (132)
T 2vxp_A           81 GIG---ALVRLKSL-QGDKLEVSLKNN---VVSVNKEPVAEPDIMA-TNGVVHVITNVLQ  132 (132)
T ss_dssp             TCS---SCEEEEBT-TSSEEEEEEETT---EEEESSCBEEEEEEEE-TTEEEEEESSCC-
T ss_pred             hcc---CCceEecC-CCCEEEEEEeCC---EEEEeccEEEEcceec-CCEEEEEECcEeC
Confidence            764   46678886 788999999887   8999999999999975 5799999999984

>1w7d_A Fasciclin-like protein; cell adhesion; NMR {Rhodobacter sphaeroides} PDB: 1w7e_A

Probab=99.89  E-value=1.2e-24  Score=180.46  Aligned_cols=122  Identities=29%  Similarity=0.348  Sum_probs=96.4

Q ss_pred             HHHHHHhh-cChHHHHHHHH-HhhcccccCCCCCceEEEecCCHHHhhccC----------ChHHHhcccccccccCccc
Q 042280          146 EASGVLRS-KGYSLMGSFLE-LQLLGFSDRSGIAELTVFAPFDGVMMDYVG----------NVSEYSSLLLRHTVPCKIS  213 (301)
Q Consensus       146 ~~~~~L~~-~gfs~f~~~L~-~~l~~l~~~~~~~~~TvFAPtD~Af~~l~~----------~~~~l~~iL~yHVvp~~l~  213 (301)
                      ++.+.|+. .+|++|..++. +++.+..+  +.+++|||||+|+||++++.          +.+.|+++|+|||+|++++
T Consensus         4 ~i~~~l~~~~~~s~f~~~l~~agl~~~L~--~~~~~TvFAPtn~Af~~l~~~~~~~l~~~~~~~~l~~lL~yHvv~~~~~   81 (137)
T 1w7d_A            4 DIVETATGAGSFTTLLTAAEAAGLVDTLK--GDGPFTVFAPTDAAFAALPEGTVEDLLKPENKEKLTEILTYHVVPGEVM   81 (137)
T ss_dssp             TTGGGGGSCSSSTTTTHHHHHTTTHHHHT--SSSCEEEECCCHHHHTTSTTTHHHHTTSHHHHHHHHHHHHHHEEESCCC
T ss_pred             CHHHHHHhCCCHHHHHHHHHHcCCHHHHc--CCCCEEEEEECHHHHHHcCHhHHHHHhCcCCHHHHHHHHHhhEeCcEEc
Confidence            45667764 45999999884 34432222  23579999999999999853          3466889999999999998


Q ss_pred             ccccCCCCCCCceeeccCCcEEEEEEcCCCcccEEECcEEEeCCceeeeCCeEEEEEccccCCCC
Q 042280          214 WSDLVGFDDGDALKTFLNGFKINVTRSDGDDDLLMLNGVVISSPNLYYSDWLVVHGIHEVLAVPA  278 (301)
Q Consensus       214 ~~dL~~~~~g~~l~Tll~g~~l~v~~~~~~~~~i~VNg~~I~~pDi~~~~~gVIHgId~VL~p~~  278 (301)
                      .++|.   .+..++|+ .|..|.|+..+|    ++|||++|+.+|+.+ .|||||+||+||.|++
T Consensus        82 ~~~l~---~~~~~~tl-~G~~l~v~~~~g----v~vn~a~v~~~di~~-~NGvIHvID~VL~P~s  137 (137)
T 1w7d_A           82 SSDLT---EGMTAETV-EGGALTVTLEGG----PKVNGVSISQPDVDA-SNGVIHVIDGVLMPGA  137 (137)
T ss_dssp             TTTSC---SSEEEECT-TSCEEEEECTTS----CEETTEECSBCCCBC-SSSEEEBCSSCCSSCC
T ss_pred             HHHhc---CCCeeecc-CCceEEEEecCC----EEEeCcEEEECCeec-CCeEEEEECeeeCCCC
Confidence            88876   46678886 788999987643    999999999999975 5789999999999874

>1nyo_A Immunogenic protein MPT70; seven-stranded beta-barrel, fasciclin domain, structural genomics, PSI, protein structure initiative; NMR {Mycobacterium tuberculosis} SCOP: b.118.1.1

Probab=99.88  E-value=1.4e-23  Score=179.16  Aligned_cols=124  Identities=23%  Similarity=0.229  Sum_probs=100.1

Q ss_pred             HHHHHHHHhhc-ChHHHHHHHHHh---hccccc-CCCCCceEEEecCCHHHhhccC--------ChHHHhcccccccccC
Q 042280          144 FEEASGVLRSK-GYSLMGSFLELQ---LLGFSD-RSGIAELTVFAPFDGVMMDYVG--------NVSEYSSLLLRHTVPC  210 (301)
Q Consensus       144 ~~~~~~~L~~~-gfs~f~~~L~~~---l~~l~~-~~~~~~~TvFAPtD~Af~~l~~--------~~~~l~~iL~yHVvp~  210 (301)
                      -+++.+.|+.. .|++|..+|...   .+++.+ ..+.+ ||||||+|+||+++..        +.+.|+++|+|||+|+
T Consensus        27 ~~~i~~~l~~~~~~s~f~~~l~~~~~~~agl~~~L~~~g-~TvFAPtn~AF~~l~~~~~~~L~~~~~~L~~iL~yHvv~g  105 (163)
T 1nyo_A           27 QDPVAVAASNNPELTTLTAALSGQLNPQVNLVDTLNSGQ-YTVFAPTNAAFSKLPASTIDELKTNSSLLTSILTYHVVAG  105 (163)
T ss_dssp             HSCHHHHHTTSTTTHHHHHHHHSSSCTTCCCHHHHTSSS-EEECCBCHHHHHHSCHHHHHHHTTCSSHHHHHHHHTEEES
T ss_pred             CcCHHHHHHhCCCHHHHHHHHHhccccccCHHHHhCCCC-cEEEEECHHHHHhccHHHHHHHhcCHHHHHHHHHhceECC
Confidence            45788888855 599999998711   123322 23345 9999999999998842        3467889999999999


Q ss_pred             cccccccCCCCCCCceeeccCCcEEEEEEcCCCcccEEECcEEEeCCceeeeCCeEEEEEccccCCCC
Q 042280          211 KISWSDLVGFDDGDALKTFLNGFKINVTRSDGDDDLLMLNGVVISSPNLYYSDWLVVHGIHEVLAVPA  278 (301)
Q Consensus       211 ~l~~~dL~~~~~g~~l~Tll~g~~l~v~~~~~~~~~i~VNg~~I~~pDi~~~~~gVIHgId~VL~p~~  278 (301)
                      +++.++|.    | .++|+ .|+.|.|+..++   .++||+++|+.+|+.. .|||||+||+||.|++
T Consensus       106 ~~~~~~l~----g-~~~Tl-~G~~l~v~~~~~---~v~vn~a~V~~~di~a-~NGvIHvID~VL~P~~  163 (163)
T 1nyo_A          106 QTSPANVV----G-TRQTL-QGASVTVTGQGN---SLKVGNADVVCGGVST-ANATVYMIDSVLMPPA  163 (163)
T ss_dssp             CCCTTTSC----E-EEECT-TSSEEEEEECSS---CEEETTEECSSBCCCC-SSEEEBCBSSCCCCCC
T ss_pred             EEcHHHhC----C-ccccC-CCCEEEEEEECC---EEEEeccEEEECceEc-CCEEEEEECcEeCCCC
Confidence            99999885    3 58886 789999999887   8999999999999975 5799999999999874

>1w7d_A Fasciclin-like protein; cell adhesion; NMR {Rhodobacter sphaeroides} PDB: 1w7e_A

Probab=99.73  E-value=2.2e-18  Score=142.54  Aligned_cols=88  Identities=25%  Similarity=0.416  Sum_probs=74.1

Q ss_pred             CceEEEecCChhhhcCCCC---------C---H-HHhhhcccCCccCccccCCCCCCCcccccCCCceEEEEEeCCCCeE
Q 042280           19 PFLTIFSPSDSAFVSSGQP---------S---L-SLLEFHFSPLSLPLYSLKKLPCNSKIPTLSPSHSLVITSFPSDCNV   85 (301)
Q Consensus        19 ~~~TiFAPtd~Af~~~~~~---------~---~-~lL~yHiv~g~~~~~~L~~~~~~~~l~Tll~g~~l~vt~~~~~~~v   85 (301)
                      +.+|||||+|+||.+++..         .   + ++|+||+++|+++.++|.+   +..++|+ .|+.|.|+..  ++ +
T Consensus        35 ~~~TvFAPtn~Af~~l~~~~~~~l~~~~~~~~l~~lL~yHvv~~~~~~~~l~~---~~~~~tl-~G~~l~v~~~--~g-v  107 (137)
T 1w7d_A           35 GPFTVFAPTDAAFAALPEGTVEDLLKPENKEKLTEILTYHVVPGEVMSSDLTE---GMTAETV-EGGALTVTLE--GG-P  107 (137)
T ss_dssp             SCEEEECCCHHHHTTSTTTHHHHTTSHHHHHHHHHHHHHHEEESCCCTTTSCS---SEEEECT-TSCEEEEECT--TS-C
T ss_pred             CCEEEEEECHHHHHHcCHhHHHHHhCcCCHHHHHHHHHhhEeCcEEcHHHhcC---CCeeecc-CCceEEEEec--CC-E
Confidence            4579999999999987532         1   2 7999999999999999875   5567776 6889999875  45 9


Q ss_pred             EEeeEEEecCccc-cCCceEEEEeCCccCCC
Q 042280           86 SLKGVNLTHKPIY-NDGLLVIYGINEFFNPG  115 (301)
Q Consensus        86 ~in~~~I~~~di~-~ng~~vVH~Id~vL~P~  115 (301)
                      ++|+++|+.+|+. .||  +||+||+||.|+
T Consensus       108 ~vn~a~v~~~di~~~NG--vIHvID~VL~P~  136 (137)
T 1w7d_A          108 KVNGVSISQPDVDASNG--VIHVIDGVLMPG  136 (137)
T ss_dssp             EETTEECSBCCCBCSSS--EEEBCSSCCSSC
T ss_pred             EEeCcEEEECCeecCCe--EEEEECeeeCCC
Confidence            9999999999995 788  999999999996

>1o70_A Fasciclin I, FAS I, FCN; cell adhesion, AXON guidance, extracellular module, genetic disorder, corneal dystrophy; HET: NAG; 2.6A {Drosophila melanogaster} SCOP: b.118.1.1 b.118.1.1

Probab=99.70  E-value=5.6e-18  Score=158.68  Aligned_cols=123  Identities=15%  Similarity=0.171  Sum_probs=89.0

Q ss_pred             cChHHHHHHHH-Hh--hcccccCCCCCceEEEecCCHHHhhcc-----CChHHHhcccccccccCcccccccCCCCCC--
Q 042280          154 KGYSLMGSFLE-LQ--LLGFSDRSGIAELTVFAPFDGVMMDYV-----GNVSEYSSLLLRHTVPCKISWSDLVGFDDG--  223 (301)
Q Consensus       154 ~gfs~f~~~L~-~~--l~~l~~~~~~~~~TvFAPtD~Af~~l~-----~~~~~l~~iL~yHVvp~~l~~~dL~~~~~g--  223 (301)
                      ..|++|..+|. +.  +.+..+  +.++||||||+|+||+++.     .+.+.|+++|+|||+|+++..++|.....+  
T Consensus        22 ~~~s~~~~~l~~ag~~l~~~L~--~~~~~TvFAPtn~Af~~~~~~~l~~~~~~l~~iL~yHvv~g~~~~~~l~~~~~~~~   99 (324)
T 1o70_A           22 GALRKFYEVIMDNGGAVLDDIN--SLTEVTILAPSNEAWNSSNINNVLRDRNKMRQILNMHIIKDRLNVDKIRQKNANLI   99 (324)
T ss_dssp             HHHHHHHHHHHHTCSHHHHHHH--TCSSEEEEEECHHHHHHTCTHHHHTCHHHHHHHHHHTEESSCCCHHHHHHHTSSSC
T ss_pred             CcHHHHHHHHHHHhHHHHHHHc--CCCCeEEEEEChHhhhcccHhhhhCCHHHHHHHHHhcEeCCeecHHHHhhccCCCc
Confidence            34999988884 33  432212  2457999999999998752     356788999999999999998888753311  


Q ss_pred             CceeeccCCcEEEEEEcCC-CcccEEECc----EEEeCCceeeeCCeEEEEEccccCCCCc
Q 042280          224 DALKTFLNGFKINVTRSDG-DDDLLMLNG----VVISSPNLYYSDWLVVHGIHEVLAVPAT  279 (301)
Q Consensus       224 ~~l~Tll~g~~l~v~~~~~-~~~~i~VNg----~~I~~pDi~~~~~gVIHgId~VL~p~~~  279 (301)
                      ..++|+.++..+.+...++ ....+++||    ++|+.+|+.. +|||||+||+||.||..
T Consensus       100 ~~~~Tl~g~~~l~~~v~~~~~~~~v~v~~g~~~a~v~~~di~~-~NGvIhvID~VL~pp~~  159 (324)
T 1o70_A          100 AQVPTVNNNTFLYFNVRGEGSDTVITVEGGGVNATVIQADVAQ-TNGYVHIIDHVLGVPYT  159 (324)
T ss_dssp             CCEEBSSTTCEEEEEEESCGGGCEEEEEETTEEEEEEEEEEEC-SSEEEEEESSCTTSCCS
T ss_pred             eEEEcCCCCceEEEEEeecCCceEEEEcCCceeEEEEeccccc-cCcEEEEEchhhhhchh
Confidence            1688974443355554321 123588985    8999999975 57999999999999874

>2vxp_A Transforming growth factor-beta-induced protein IG-H3; RGD-containing collagen-associated protein, FAS1, BIGH3, vision, amyloid, RGD-CAP, secreted; 2.5A {Homo sapiens} PDB: 1x3b_A

Probab=99.68  E-value=2.5e-17  Score=135.42  Aligned_cols=87  Identities=20%  Similarity=0.310  Sum_probs=71.3

Q ss_pred             CceEEEecCChhhhcCCCC-------C---H-HHhhhcccCCccCccccCCCCCCCcccccCCCceEEEEEeCCCCeEEE
Q 042280           19 PFLTIFSPSDSAFVSSGQP-------S---L-SLLEFHFSPLSLPLYSLKKLPCNSKIPTLSPSHSLVITSFPSDCNVSL   87 (301)
Q Consensus        19 ~~~TiFAPtd~Af~~~~~~-------~---~-~lL~yHiv~g~~~~~~L~~~~~~~~l~Tll~g~~l~vt~~~~~~~v~i   87 (301)
                      +.+|||||+|+||.+++..       .   + ++|+||++++.+..++|..   +..++|+ .|..|.|+..  ++.+++
T Consensus        34 ~~~TvFAPtn~Af~~l~~~~~~~l~~~~~~l~~iL~yHvv~~~~~~~~l~~---~~~~~tl-~G~~l~v~~~--~~~v~v  107 (132)
T 2vxp_A           34 GVYTVFAPTNEAFRALPPRERSRLLGDAKELANILKYHIGDEILVSGGIGA---LVRLKSL-QGDKLEVSLK--NNVVSV  107 (132)
T ss_dssp             CCEEEEEECHHHHHHSCHHHHHHHHTCHHHHHHHHHHSBBSSCCCSTTCSS---CEEEEBT-TSSEEEEEEE--TTEEEE
T ss_pred             CCEEEEeECHHHHHhhCHHHHHHHhcCHHHHHHHHHhcCcCceeehhhccC---CceEecC-CCCEEEEEEe--CCEEEE
Confidence            3579999999999987521       1   2 7999999999998888763   4567786 6889999886  457999


Q ss_pred             eeEEEecCccc-cCCceEEEEeCCccC
Q 042280           88 KGVNLTHKPIY-NDGLLVIYGINEFFN  113 (301)
Q Consensus        88 n~~~I~~~di~-~ng~~vVH~Id~vL~  113 (301)
                      |+++|+.+|+. +||  |||+||+||.
T Consensus       108 n~a~v~~~di~a~NG--vIHvID~VLl  132 (132)
T 2vxp_A          108 NKEPVAEPDIMATNG--VVHVITNVLQ  132 (132)
T ss_dssp             SSCBEEEEEEEETTE--EEEEESSCC-
T ss_pred             eccEEEEcceecCCE--EEEEECcEeC
Confidence            99999999995 788  9999999984

>1nyo_A Immunogenic protein MPT70; seven-stranded beta-barrel, fasciclin domain, structural genomics, PSI, protein structure initiative; NMR {Mycobacterium tuberculosis} SCOP: b.118.1.1

Probab=99.67  E-value=2.7e-17  Score=140.15  Aligned_cols=85  Identities=20%  Similarity=0.334  Sum_probs=72.6

Q ss_pred             eEEEecCChhhhcCCC---------CC-H-HHhhhcccCCccCccccCCCCCCCcccccCCCceEEEEEeCCCCeEEEee
Q 042280           21 LTIFSPSDSAFVSSGQ---------PS-L-SLLEFHFSPLSLPLYSLKKLPCNSKIPTLSPSHSLVITSFPSDCNVSLKG   89 (301)
Q Consensus        21 ~TiFAPtd~Af~~~~~---------~~-~-~lL~yHiv~g~~~~~~L~~~~~~~~l~Tll~g~~l~vt~~~~~~~v~in~   89 (301)
                      +|||||+|+||.++..         .. + ++|+|||++++++.++|.    + .++|+ .|+.|+|+..  ++.+++|+
T Consensus        66 ~TvFAPtn~AF~~l~~~~~~~L~~~~~~L~~iL~yHvv~g~~~~~~l~----g-~~~Tl-~G~~l~v~~~--~~~v~vn~  137 (163)
T 1nyo_A           66 YTVFAPTNAAFSKLPASTIDELKTNSSLLTSILTYHVVAGQTSPANVV----G-TRQTL-QGASVTVTGQ--GNSLKVGN  137 (163)
T ss_dssp             EEECCBCHHHHHHSCHHHHHHHTTCSSHHHHHHHHTEEESCCCTTTSC----E-EEECT-TSSEEEEEEC--SSCEEETT
T ss_pred             cEEEEECHHHHHhccHHHHHHHhcCHHHHHHHHHhceECCEEcHHHhC----C-ccccC-CCCEEEEEEE--CCEEEEec
Confidence            8999999999998742         12 3 799999999999999985    2 57887 6889999876  45699999


Q ss_pred             EEEecCccc-cCCceEEEEeCCccCCC
Q 042280           90 VNLTHKPIY-NDGLLVIYGINEFFNPG  115 (301)
Q Consensus        90 ~~I~~~di~-~ng~~vVH~Id~vL~P~  115 (301)
                      ++|+.+|+. .||  |||+||+||.|+
T Consensus       138 a~V~~~di~a~NG--vIHvID~VL~P~  162 (163)
T 1nyo_A          138 ADVVCGGVSTANA--TVYMIDSVLMPP  162 (163)
T ss_dssp             EECSSBCCCCSSE--EEBCBSSCCCCC
T ss_pred             cEEEECceEcCCE--EEEEECcEeCCC
Confidence            999999995 787  999999999996

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	301
d1o70a1	140	b.118.1.1 (A:328-467) Fasciclin I {Fruit fly (Dros	3e-04
d1nyoa_	163	b.118.1.1 (A:) Immunogenic protein MPT70 {Mycobact	0.002

>d1o70a1 b.118.1.1 (A:328-467) Fasciclin I {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 140

class: All beta proteins
fold: FAS1 domain
superfamily: FAS1 domain
family: FAS1 domain
domain: Fasciclin I
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

 Score = 38.2 bits (88), Expect = 3e-04
 Identities = 16/116 (13%), Positives = 44/116 (37%), Gaps = 13/116 (11%)

Query: 174 SGIAELTVFAP----FDGVMMD-YVGNVSEYSSLLLRHTVPCKISWSDLVGFDDGDA--L 226
           + + E+T+ AP    ++   ++  + + ++   +L  H +  +++   +   +      +
Sbjct: 25  NSLTEVTILAPSNEAWNSSNINNVLRDRNKMRQILNMHIIKDRLNVDKIRQKNANLIAQV 84

Query: 227 KTFLNGFKINVTRSDGDDDLLML-----NGVVISSPNLYYSDWLVVHGIHEVLAVP 277
            T  N   +         D ++          +   ++  ++   VH I  VL VP
Sbjct: 85  PTVNNNTFLYFNVRGEGSDTVITVEGGGVNATVIQADVAQTN-GYVHIIDHVLGVP 139

>d1nyoa_ b.118.1.1 (A:) Immunogenic protein MPT70 {Mycobacterium tuberculosis [TaxId: 1773]} Length = 163

class: All beta proteins
fold: FAS1 domain
superfamily: FAS1 domain
family: FAS1 domain
domain: Immunogenic protein MPT70
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 35.9 bits (82), Expect = 0.002
 Identities = 25/108 (23%), Positives = 39/108 (36%), Gaps = 18/108 (16%)

Query: 179 LTVFAPFDGVMMDY--------VGNVSEYSSLLLRHTVPCKISWSDLVGFDDGDALKTFL 230
            TVFAP +                N S  +S+L  H V  + S +++VG          L
Sbjct: 66  YTVFAPTNAAFSKLPASTIDELKTNSSLLTSILTYHVVAGQTSPANVVGTRQ------TL 119

Query: 231 NGFKINVTRSDGDDDLLMLNGVVISSPNLYYSDWLVVHGIHEVLAVPA 278
            G  + VT        L +    +    +  ++   V+ I  VL  PA
Sbjct: 120 QGASVTVTGQGNS---LKVGNADVVCGGVSTANA-TVYMIDSVLMPPA 163

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	301
d1nyoa_	163	Immunogenic protein MPT70 {Mycobacterium tuberculo	99.87
d1o70a2	157	Fasciclin I {Fruit fly (Drosophila melanogaster) [	99.75
d1o70a1	140	Fasciclin I {Fruit fly (Drosophila melanogaster) [	99.74
d1nyoa_	163	Immunogenic protein MPT70 {Mycobacterium tuberculo	99.68
d1o70a1	140	Fasciclin I {Fruit fly (Drosophila melanogaster) [	99.59
d1o70a2	157	Fasciclin I {Fruit fly (Drosophila melanogaster) [	99.43

>d1nyoa_ b.118.1.1 (A:) Immunogenic protein MPT70 {Mycobacterium tuberculosis [TaxId: 1773]}

class: All beta proteins
fold: FAS1 domain
superfamily: FAS1 domain
family: FAS1 domain
domain: Immunogenic protein MPT70
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.87  E-value=3.7e-23  Score=174.66  Aligned_cols=123  Identities=24%  Similarity=0.252  Sum_probs=97.4

Q ss_pred             HHHHHHhhc-ChHHHHHHHHHhh---cccccCCCCCceEEEecCCHHHhhcc--------CChHHHhcccccccccCccc
Q 042280          146 EASGVLRSK-GYSLMGSFLELQL---LGFSDRSGIAELTVFAPFDGVMMDYV--------GNVSEYSSLLLRHTVPCKIS  213 (301)
Q Consensus       146 ~~~~~L~~~-gfs~f~~~L~~~l---~~l~~~~~~~~~TvFAPtD~Af~~l~--------~~~~~l~~iL~yHVvp~~l~  213 (301)
                      .+...+... .|++|..++.+.+   +++.+..+.|+||||||+|+||++++        .+.+.|+++|+|||+++++.
T Consensus        29 ~v~~~a~~~p~lstl~~Al~a~~~~~a~L~~~L~~gpfTvFAPtn~AF~~l~~~~~~~l~~~~~~L~~iL~yHVv~g~~~  108 (163)
T d1nyoa_          29 PVAVAASNNPELTTLTAALSGQLNPQVNLVDTLNSGQYTVFAPTNAAFSKLPASTIDELKTNSSLLTSILTYHVVAGQTS  108 (163)
T ss_dssp             CHHHHHTTSTTTHHHHHHHHSSSCTTCCCHHHHTSSSEEECCBCHHHHHHSCHHHHHHHTTCSSHHHHHHHHTEEESCCC
T ss_pred             hHHHHHhcCCchHHHHHHHhhccccccchhHhhcCCCeEEEEECcHHHHhcCHHHHHhhhhhHHHHHHhhhhhhhhhhhh
Confidence            344555544 4999999986532   34443212368999999999999974        24467899999999999999


Q ss_pred             ccccCCCCCCCceeeccCCcEEEEEEcCCCcccEEECcEEEeCCceeeeCCeEEEEEccccCCCC
Q 042280          214 WSDLVGFDDGDALKTFLNGFKINVTRSDGDDDLLMLNGVVISSPNLYYSDWLVVHGIHEVLAVPA  278 (301)
Q Consensus       214 ~~dL~~~~~g~~l~Tll~g~~l~v~~~~~~~~~i~VNg~~I~~pDi~~~~~gVIHgId~VL~p~~  278 (301)
                      .+++..     .++|+ .|..|.|+..++   .++||+++|+.+|+.. .|||||+||+||.||+
T Consensus       109 ~~~l~~-----~~~Tl-~G~~l~v~~~~~---~i~v~~a~Vv~~di~a-~NGvIHvID~VLlPPa  163 (163)
T d1nyoa_         109 PANVVG-----TRQTL-QGASVTVTGQGN---SLKVGNADVVCGGVST-ANATVYMIDSVLMPPA  163 (163)
T ss_dssp             TTTSCE-----EEECT-TSSEEEEEECSS---CEEETTEECSSBCCCC-SSEEEBCBSSCCCCCC
T ss_pred             hhhhhh-----hhhhc-cCcceeEEecCC---EEEEeceEEEECCeec-CCcEEEEECccccCCC
Confidence            888752     36775 889999999888   8999999999999975 5799999999999985

>d1o70a2 b.118.1.1 (A:468-624) Fasciclin I {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: All beta proteins
fold: FAS1 domain
superfamily: FAS1 domain
family: FAS1 domain
domain: Fasciclin I
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=99.75  E-value=3.9e-19  Score=147.53  Aligned_cols=127  Identities=17%  Similarity=0.101  Sum_probs=83.4

Q ss_pred             HHHHHHhhc-ChHHHHHHHH-Hhhc-ccccCCCCCceEEEecCCHHHhhccC-------------ChHHHhccccccccc
Q 042280          146 EASGVLRSK-GYSLMGSFLE-LQLL-GFSDRSGIAELTVFAPFDGVMMDYVG-------------NVSEYSSLLLRHTVP  209 (301)
Q Consensus       146 ~~~~~L~~~-gfs~f~~~L~-~~l~-~l~~~~~~~~~TvFAPtD~Af~~l~~-------------~~~~l~~iL~yHVvp  209 (301)
                      +++++|++. .|+.|..+++ ..+. .+.+.  .+++|+|||+|+||+++..             +.+.|+.+|+|||+|
T Consensus         2 Ti~~~l~~~p~ls~~~~~~~~s~l~~~L~~~--~~~~TvFaPtn~Af~~l~~~~~~~~~~~~~~~~~~~l~~il~~Hiv~   79 (157)
T d1o70a2           2 TVLGKLESDPMMSDTYKMGKFSHFNDQLNNT--QRRFTYFVPRDKGWQKTELDYPSAHKKLFMADFSYHSKSILERHLAI   79 (157)
T ss_dssp             CHHHHHHHCGGGHHHHHHTTTTTTTGGGGCS--SSEEEEEEECHHHHHHHHHHCHHHHHHHTSGGGHHHHHHHHHTTEEE
T ss_pred             cHHHHHHhCccHHHHHHHHHhCCHHHHHhCC--CCceEEEecCHHHHHHhhhhccchhhhhcCcccHHHHHHHheeEEec
Confidence            467788855 4999998873 2332 22222  2479999999999998721             235678999999999


Q ss_pred             CcccccccCC-----CCCCCceeeccCCcEEEEEEcCCCcccEEE----CcEEEeCCceeeeCCeEEEEEccccCCCC
Q 042280          210 CKISWSDLVG-----FDDGDALKTFLNGFKINVTRSDGDDDLLML----NGVVISSPNLYYSDWLVVHGIHEVLAVPA  278 (301)
Q Consensus       210 ~~l~~~dL~~-----~~~g~~l~Tll~g~~l~v~~~~~~~~~i~V----Ng~~I~~pDi~~~~~gVIHgId~VL~p~~  278 (301)
                      +...+.+..-     .......+|+.+...+.+...++   .+.+    |+++|+.+|+.+ .|||||.||+||.|++
T Consensus        80 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~a~V~~~Di~a-~NGviHvID~VLlp~~  153 (157)
T d1o70a2          80 SDKEYTMKDLVKFSQESGSVILPTFRDSLSIRVEEEAG---RYVIIWNYKKINVYRPDVEC-TNGIIHVIDYPLLEEK  153 (157)
T ss_dssp             ESSCCCHHHHHHHHHHSSSEEEECSSSEEEEEEEEETT---EEEEEETTEEEEEEEEEEEE-TTEEEEEESSCSCCTT
T ss_pred             ccccchhhhhhhhhccCCceeEEecCCcEEEEEEcCCc---EEEEecCCccceEEECCEec-CCeEEEEECceecCCC
Confidence            8754433210     01122344542234455555555   4443    569999999975 5799999999998854

>d1o70a1 b.118.1.1 (A:328-467) Fasciclin I {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: All beta proteins
fold: FAS1 domain
superfamily: FAS1 domain
family: FAS1 domain
domain: Fasciclin I
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=99.74  E-value=4.6e-19  Score=144.13  Aligned_cols=119  Identities=13%  Similarity=0.117  Sum_probs=82.2

Q ss_pred             ChHHHHHHHHHh---h-cccccCCCCCceEEEecCCHHHhhcc-----CChHHHhcccccccccCcccccccCCCCC--C
Q 042280          155 GYSLMGSFLELQ---L-LGFSDRSGIAELTVFAPFDGVMMDYV-----GNVSEYSSLLLRHTVPCKISWSDLVGFDD--G  223 (301)
Q Consensus       155 gfs~f~~~L~~~---l-~~l~~~~~~~~~TvFAPtD~Af~~l~-----~~~~~l~~iL~yHVvp~~l~~~dL~~~~~--g  223 (301)
                      +|+.|..++...   + ..+...   +++|+|||+|+||+++.     .+.+.|+.+|+|||+|++++.++|.....  .
T Consensus         5 ~~~~f~~~i~~~g~~~~~~l~~~---~~~TvFAPtn~Af~~~~~~~~~~~~~~l~~~l~yHiv~~~~~~~~l~~~~~~~~   81 (140)
T d1o70a1           5 ALRKFYEVIMDNGGAVLDDINSL---TEVTILAPSNEAWNSSNINNVLRDRNKMRQILNMHIIKDRLNVDKIRQKNANLI   81 (140)
T ss_dssp             HHHHHHHHHHHTCSHHHHHHHTC---SSEEEEEECHHHHHHTCTHHHHTCHHHHHHHHHHTEESSCCCHHHHHHHTSSSC
T ss_pred             cHHHHHHHHHHHHHHHHHHhcCC---CCEEEEEECHHHHhcCChhhhcCCHHHHHHHHHhhccCCeEEHHHHhcCcccCc
Confidence            477777777432   1 223332   35999999999998863     35677899999999999998888754222  2


Q ss_pred             CceeeccCCcEEEEEEcCCCc-ccEEEC----cEEEeCCceeeeCCeEEEEEccccCCC
Q 042280          224 DALKTFLNGFKINVTRSDGDD-DLLMLN----GVVISSPNLYYSDWLVVHGIHEVLAVP  277 (301)
Q Consensus       224 ~~l~Tll~g~~l~v~~~~~~~-~~i~VN----g~~I~~pDi~~~~~gVIHgId~VL~p~  277 (301)
                      ..++|+.++....+....+.. ..+.++    .++|+.+|+.+ .|||||.||+||.||
T Consensus        82 ~~~~t~~g~~~~~~~~~~~~~~~~~~~~~~~~~a~V~~~Di~~-~NGvIH~ID~VL~~P  139 (140)
T d1o70a1          82 AQVPTVNNNTFLYFNVRGEGSDTVITVEGGGVNATVIQADVAQ-TNGYVHIIDHVLGVP  139 (140)
T ss_dssp             CCEEBSSTTCEEEEEEESCGGGCEEEEEETTEEEEEEEEEEEC-SSEEEEEESSCTTSC
T ss_pred             eEeeecCCCceEEEEEeccceeEEEEecCCcceEEEEeCCEec-CCeEEEEECCccCCc
Confidence            357887555444444433211 234443    38999999975 579999999999887

>d1nyoa_ b.118.1.1 (A:) Immunogenic protein MPT70 {Mycobacterium tuberculosis [TaxId: 1773]}

class: All beta proteins
fold: FAS1 domain
superfamily: FAS1 domain
family: FAS1 domain
domain: Immunogenic protein MPT70
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.68  E-value=5.2e-18  Score=142.68  Aligned_cols=87  Identities=20%  Similarity=0.305  Sum_probs=72.7

Q ss_pred             CceEEEecCChhhhcCCC---------CC-H-HHhhhcccCCccCccccCCCCCCCcccccCCCceEEEEEeCCCCeEEE
Q 042280           19 PFLTIFSPSDSAFVSSGQ---------PS-L-SLLEFHFSPLSLPLYSLKKLPCNSKIPTLSPSHSLVITSFPSDCNVSL   87 (301)
Q Consensus        19 ~~~TiFAPtd~Af~~~~~---------~~-~-~lL~yHiv~g~~~~~~L~~~~~~~~l~Tll~g~~l~vt~~~~~~~v~i   87 (301)
                      +.+|||||+|+||.+++.         +. + ++|+|||++|++..+++..     .++|+ .|..++|+..  ++.+++
T Consensus        64 gpfTvFAPtn~AF~~l~~~~~~~l~~~~~~L~~iL~yHVv~g~~~~~~l~~-----~~~Tl-~G~~l~v~~~--~~~i~v  135 (163)
T d1nyoa_          64 GQYTVFAPTNAAFSKLPASTIDELKTNSSLLTSILTYHVVAGQTSPANVVG-----TRQTL-QGASVTVTGQ--GNSLKV  135 (163)
T ss_dssp             SSEEECCBCHHHHHHSCHHHHHHHTTCSSHHHHHHHHTEEESCCCTTTSCE-----EEECT-TSSEEEEEEC--SSCEEE
T ss_pred             CCeEEEEECcHHHHhcCHHHHHhhhhhHHHHHHhhhhhhhhhhhhhhhhhh-----hhhhc-cCcceeEEec--CCEEEE
Confidence            346999999999998741         12 3 8999999999999998853     35665 6899999886  467999


Q ss_pred             eeEEEecCccc-cCCceEEEEeCCccCCC
Q 042280           88 KGVNLTHKPIY-NDGLLVIYGINEFFNPG  115 (301)
Q Consensus        88 n~~~I~~~di~-~ng~~vVH~Id~vL~P~  115 (301)
                      |+++|+.+|+. .||  |||+||+||.|+
T Consensus       136 ~~a~Vv~~di~a~NG--vIHvID~VLlPP  162 (163)
T d1nyoa_         136 GNADVVCGGVSTANA--TVYMIDSVLMPP  162 (163)
T ss_dssp             TTEECSSBCCCCSSE--EEBCBSSCCCCC
T ss_pred             eceEEEECCeecCCc--EEEEECccccCC
Confidence            99999999995 788  999999999997

>d1o70a1 b.118.1.1 (A:328-467) Fasciclin I {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: All beta proteins
fold: FAS1 domain
superfamily: FAS1 domain
family: FAS1 domain
domain: Fasciclin I
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=99.59  E-value=4.5e-16  Score=126.11  Aligned_cols=96  Identities=16%  Similarity=0.251  Sum_probs=69.6

Q ss_pred             CCceEEEecCChhhhcCCCCC-------H-HHhhhcccCCccCccccCCCC--CCCcccccCCCceEEEEEeCCC--CeE
Q 042280           18 SPFLTIFSPSDSAFVSSGQPS-------L-SLLEFHFSPLSLPLYSLKKLP--CNSKIPTLSPSHSLVITSFPSD--CNV   85 (301)
Q Consensus        18 ~~~~TiFAPtd~Af~~~~~~~-------~-~lL~yHiv~g~~~~~~L~~~~--~~~~l~Tll~g~~l~vt~~~~~--~~v   85 (301)
                      .+++|+|||+|+||.+.....       + .+|+|||++|+++.++|.+..  ....++|+..+....+....+.  ..+
T Consensus        27 ~~~~TvFAPtn~Af~~~~~~~~~~~~~~l~~~l~yHiv~~~~~~~~l~~~~~~~~~~~~t~~g~~~~~~~~~~~~~~~~~  106 (140)
T d1o70a1          27 LTEVTILAPSNEAWNSSNINNVLRDRNKMRQILNMHIIKDRLNVDKIRQKNANLIAQVPTVNNNTFLYFNVRGEGSDTVI  106 (140)
T ss_dssp             CSSEEEEEECHHHHHHTCTHHHHTCHHHHHHHHHHTEESSCCCHHHHHHHTSSSCCCEEBSSTTCEEEEEEESCGGGCEE
T ss_pred             CCCEEEEEECHHHHhcCChhhhcCCHHHHHHHHHhhccCCeEEHHHHhcCcccCceEeeecCCCceEEEEEeccceeEEE
Confidence            356899999999998865321       2 899999999999999886422  1235678765555555544322  234


Q ss_pred             EEe----eEEEecCccc-cCCceEEEEeCCccCCC
Q 042280           86 SLK----GVNLTHKPIY-NDGLLVIYGINEFFNPG  115 (301)
Q Consensus        86 ~in----~~~I~~~di~-~ng~~vVH~Id~vL~P~  115 (301)
                      .++    .++|+.+|+. .||  |||+||+||.||
T Consensus       107 ~~~~~~~~a~V~~~Di~~~NG--vIH~ID~VL~~P  139 (140)
T d1o70a1         107 TVEGGGVNATVIQADVAQTNG--YVHIIDHVLGVP  139 (140)
T ss_dssp             EEEETTEEEEEEEEEEECSSE--EEEEESSCTTSC
T ss_pred             EecCCcceEEEEeCCEecCCe--EEEEECCccCCc
Confidence            443    4799999995 788  999999999987

>d1o70a2 b.118.1.1 (A:468-624) Fasciclin I {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: All beta proteins
fold: FAS1 domain
superfamily: FAS1 domain
family: FAS1 domain
domain: Fasciclin I
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=99.43  E-value=2.1e-14  Score=118.51  Aligned_cols=97  Identities=18%  Similarity=0.160  Sum_probs=62.9

Q ss_pred             CCCceEEEecCChhhhcCCC-----------C----CH-HHhhhcccCCccCccccCC-----CCCCCcccccCCCceEE
Q 042280           17 HSPFLTIFSPSDSAFVSSGQ-----------P----SL-SLLEFHFSPLSLPLYSLKK-----LPCNSKIPTLSPSHSLV   75 (301)
Q Consensus        17 ~~~~~TiFAPtd~Af~~~~~-----------~----~~-~lL~yHiv~g~~~~~~L~~-----~~~~~~l~Tll~g~~l~   75 (301)
                      .+..+|||||+|+||.++..           +    .+ .+|+|||++|.....+...     .......+|+.....++
T Consensus        32 ~~~~~TvFaPtn~Af~~l~~~~~~~~~~~~~~~~~~~l~~il~~Hiv~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  111 (157)
T d1o70a2          32 TQRRFTYFVPRDKGWQKTELDYPSAHKKLFMADFSYHSKSILERHLAISDKEYTMKDLVKFSQESGSVILPTFRDSLSIR  111 (157)
T ss_dssp             SSSEEEEEEECHHHHHHHHHHCHHHHHHHTSGGGHHHHHHHHHTTEEEESSCCCHHHHHHHHHHSSSEEEECSSSEEEEE
T ss_pred             CCCceEEEecCHHHHHHhhhhccchhhhhcCcccHHHHHHHheeEEecccccchhhhhhhhhccCCceeEEecCCcEEEE
Confidence            45578999999999997521           1    12 6899999998765443211     01122234443223344


Q ss_pred             EEEeCCCCeEEE----eeEEEecCccc-cCCceEEEEeCCccCCCCC
Q 042280           76 ITSFPSDCNVSL----KGVNLTHKPIY-NDGLLVIYGINEFFNPGYG  117 (301)
Q Consensus        76 vt~~~~~~~v~i----n~~~I~~~di~-~ng~~vVH~Id~vL~P~~~  117 (301)
                      +...  ++.+.+    |+++|+.+|+. .||  +||+||+||.|...
T Consensus       112 ~~~~--~~~~~~~~~~~~a~V~~~Di~a~NG--viHvID~VLlp~~d  154 (157)
T d1o70a2         112 VEEE--AGRYVIIWNYKKINVYRPDVECTNG--IIHVIDYPLLEEKD  154 (157)
T ss_dssp             EEEE--TTEEEEEETTEEEEEEEEEEEETTE--EEEEESSCSCCTTT
T ss_pred             EEcC--CcEEEEecCCccceEEECCEecCCe--EEEEECceecCCCC
Confidence            4444  344443    56899999995 788  99999999999743