Citrus Sinensis ID: 042303

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------52
MHAILLPKVNQVLMYDATVWKISKIPLPQEKMPCRVIDPKTNEVDCWAHSVLFDIETAKLKPLKIQTDTWCSSGGLTVDGHLVGTGGYQGGANTVRYLWTCDTCDWIEYPTALAEPRWYSTQVTLPDGGFIVVGGRGAFSYEYIPPQGQSNKQSIYLPLLRETHDQLAGHFGTENFYRIENNLYPFVNLVTDGNLFIFSNNRSILFDPKANRVIREYPVLTGGSRNYPASGMSVLLPIKLHAGHQKIIHSDILVCGGAAWDAFYYAEDKKQFWPALQDCGRIRITEPNPVWKKEMMPTRRVMGDMTILPTGDVLLVNGAQNGTSAWNDAEEPALAPALYKTKEKRHHRFQELAPTTIPRMYHSVSVLLPDGKVLIAGSNTHDGYKFDHKYPTELRVEKFSPPYLDPALAHLRPEIVLDKSDCMVGYGQRISIQVKTTEGIKQSDIRITMYAPAFTTHGTSMNQRLVILGLVEVRNDVAPGQHKIVAEAPPSGVITPPGYYLLYVVYKGVPSPGMWFQIK
cEEEEEccccEEEEEEEEEcccccccccccccccEEccccccccccEEEEEEEEcccccEEEccccccccccccEEcccccEEEEccccccccEEEEEEcccccccccccccccccccccEEEEcccccEEEEcccccccccccccccccccccEEcccccccccccccccccccccccccccccEEEEEccccEEEEEcccEEEEEcccccEEEEcccccccccccccccccccccccccccccEEEEEEEEEEccccccccccccccccccccccccEEEEEcccccccccccccccEEEcEEEEcccccEEEEccccccccccccccccccccEEEEccccccccEEccccccccccEEEEEEEEccccEEEEcccccccccccccccccEEEEEEcccccccccccccccEEEcccccEEEcccEEEEEEEEccccccccEEEEEEccccccccccccccEEEEcEEEEEcccccccEEEEEEccccccccccccEEEEEEccccccccEEEEEc
ccEEEEccccEEEEEEccccccccccccccccccccccHHccccccEEEEEEEccccccEEEcccccccEcccccEccccEEEEEcccccccEEEEEEccccccccccccccHcccccccccEEcccccEEEEEccccccccccccccccccccEEcccccccccccccccccccccccccccccEEEEcccccEEEEEcccEEEEEccccEEEEEccccccccccccccccEEEEccccccccccccccEEEEEcccccccccccccccccccccccccEEEEccccccEEEcccccccccccEEEcccccEEEEEccccccccccccccccccEEEEccccccccEEEEccccccccEEEcEEEEccccEEEEEccccccccccccccccEEEEEEEcccccccccccccccEEEcccccEEEcccEEEEEEEcccccccccEEEEEEcccccEcccccccEEEEEEEEccccccccccEEEEEEccccccccccccEEEEEEEccccccEEEEEEc
mhaillpkVNQVLMYDATVWkiskiplpqekmpcrvidpktnevdcwaHSVLFDietaklkplkiqtdtwcssggltvdghlvgtggyqgganTVRYLWTCdtcdwieyptalaeprwystqvtlpdggfivvggrgafsyeyippqgqsnkqsiylpLLRETHDQLaghfgtenfyriennlypfvnlvtdgnlfifsnnrsilfdpkanrvireypvltggsrnypasgmsvllpiklhaghqkiihsdilvcGGAAWDAFYYAedkkqfwpalqdcgriritepnpvwkkemmptrrvmgdmtilptgDVLLVngaqngtsawndaeepalapalYKTKEKRHHRfqelapttiprmyhsvsvllpdgkvliagsnthdgykfdhkyptelrvekfsppyldpalahlrpeivldksdcmvgygQRISIQVKttegikqsdiritmyapaftthgtsmnQRLVILGLVevrndvapgqhkivaeappsgvitppgYYLLYVVYkgvpspgmwfqik
mhaillpkvnqVLMYDATVWkiskiplpqekMPCRVIDPKTNEVDCWAHSVLFDIETAKLKPLKIQTDTWCSSGGLTVDGHLVGTGGYQGGANTVRYLWTCDTCDWIEYPTALAEPRWYSTQVTLPDGGFIVVGGRGAFSYEYIPPQGQSNKQSIYLPLLRETHDQLAGHFGTENFYRIENNLYPFVNLVTDGNLFIFSNNrsilfdpkanrVIREYPvltggsrnypASGMSVLLPIKLHAGHQKIIHSDILVCGGAAWDAFYYAEDKKQFWpalqdcgriritepnpvwkkemmptRRVMGDMTILPTGDVLLVNGAQNGtsawndaeePALAPALYKTKEKRHHRFQelapttiprmyHSVSVLLPDGKVLIAGSNTHDGYKFDHKYPTELRVEKFSPPYLDPALAHLRPEIVLDKSDCMVGYGQRisiqvkttegikqsdiRITMYAPAFTTHGTSMNQRLVILGLVEVRNDVAPGQhkivaeappsgviTPPGYYLLYVVYKGVPSPGMWFQIK
MHAILLPKVNQVLMYDATVWKISKIPLPQEKMPCRVIDPKTNEVDCWAHSVLFDIETAKLKPLKIQTDTWCSSGGLTVDGHLVGTGGYQGGANTVRYLWTCDTCDWIEYPTALAEPRWYSTQVTLPDGGFIVVGGRGAFSYEYIPPQGQSNKQSIYLPLLRETHDQLAGHFGTENFYRIENNLYPFVNLVTDGNLFIFSNNRSILFDPKANRVIREYPVLTGGSRNYPASGMSVLLPIKLHAGHQKIIHSDILVCGGAAWDAFYYAEDKKQFWPALQDCGRIRITEPNPVWKKEMMPTRRVMGDMTILPTGDVLLVNGAQNGTSAWNDAEEPALAPALYKTKEKRHHRFQELAPTTIPRMYHSVSVLLPDGKVLIAGSNTHDGYKFDHKYPTELRVEKFSPPYLDPALAHLRPEIVLDKSDCMVGYGQRISIQVKTTEGIKQSDIRITMYAPAFTTHGTSMNQRLVILGLVEVRNDVAPGQHKIVAEAPPSGVITPPGyyllyvvyKGVPSPGMWFQIK
***ILLPKVNQVLMYDATVWKISKIPLPQEKMPCRVIDPKTNEVDCWAHSVLFDIETAKLKPLKIQTDTWCSSGGLTVDGHLVGTGGYQGGANTVRYLWTCDTCDWIEYPTALAEPRWYSTQVTLPDGGFIVVGGRGAFSYEYIPPQGQSNKQSIYLPLLRETHDQLAGHFGTENFYRIENNLYPFVNLVTDGNLFIFSNNRSILFDPKANRVIREYPVLTGGSRNYPASGMSVLLPIKLHAGHQKIIHSDILVCGGAAWDAFYYAEDKKQFWPALQDCGRIRITEPNPVWKKEMMPTRRVMGDMTILPTGDVLLVNGAQNGTSAWN******LAPALYK*****HHRFQELAPTTIPRMYHSVSVLLPDGKVLIAGSNTHDGYKFDHKYPTELRVEKFSPPYLDPALAHLRPEIVLDKSDCMVGYGQRISIQVKTTEGIKQSDIRITMYAPAFTTHGTSMNQRLVILGLVEVRNDVAPGQHKIVAEAPPSGVITPPGYYLLYVVYKGVPSPGMWF***
MHAILLPKVNQVLMYDATVWKISKIPLPQEKMPCRVIDPKTNEVDCWAHSVLFDIETAKLKPLKIQTDTWCSSGGLTVDGHLVGTGGYQGGANTVRYLWTCDTCDWIEYPTALAEPRWYSTQVTLPDGGFIVVGGRGAFSYEYIPPQGQSNKQSIYLPLLRETHDQLAGHFGTENFYRIENNLYPFVNLVTDGNLFIFSNNRSILFDPKANRVIREYPVLTGGSRNYPASGMSVLLPIKLHAGHQKIIHSDILVCGGAAWDAFYYAEDKKQFWPALQDCGRIRITEPNPVWKKEMMPTRRVMGDMTILPTGDVLLVNGAQNGTSAWNDAEEPALAPALYKTKEKRHHRFQELAPTTIPRMYHSVSVLLPDGKVLIAGSNTHDGYKFDHKYPTELRVEKFSPPYLDPALAHLRPEIVLDKSDCMVGYGQRISIQVKTTEGIKQSDIRITMYAPAFTTHGTSMNQRLVILGLVEVRNDVAPGQHKIVAEAPPSGVITPPGYYLLYVVYKGVPSPGMWFQIK
MHAILLPKVNQVLMYDATVWKISKIPLPQEKMPCRVIDPKTNEVDCWAHSVLFDIETAKLKPLKIQTDTWCSSGGLTVDGHLVGTGGYQGGANTVRYLWTCDTCDWIEYPTALAEPRWYSTQVTLPDGGFIVVGGRGAFSYEYIPPQGQSNKQSIYLPLLRETHDQLAGHFGTENFYRIENNLYPFVNLVTDGNLFIFSNNRSILFDPKANRVIREYPVLTGGSRNYPASGMSVLLPIKLHAGHQKIIHSDILVCGGAAWDAFYYAEDKKQFWPALQDCGRIRITEPNPVWKKEMMPTRRVMGDMTILPTGDVLLVNGAQNGTSAWNDAEEPALAPALYKTKEKRHHRFQELAPTTIPRMYHSVSVLLPDGKVLIAGSNTHDGYKFDHKYPTELRVEKFSPPYLDPALAHLRPEIVLDKSDCMVGYGQRISIQVKTTEGIKQSDIRITMYAPAFTTHGTSMNQRLVILGLVEVRNDVAPGQHKIVAEAPPSGVITPPGYYLLYVVYKGVPSPGMWFQIK
MHAILLPKVNQVLMYDATVWKISKIPLPQEKMPCRVIDPKTNEVDCWAHSVLFDIETAKLKPLKIQTDTWCSSGGLTVDGHLVGTGGYQGGANTVRYLWTCDTCDWIEYPTALAEPRWYSTQVTLPDGGFIVVGGRGAFSYEYIPPQGQSNKQSIYLPLLRETHDQLAGHFGTENFYRIENNLYPFVNLVTDGNLFIFSNNRSILFDPKANRVIREYPVLTGGSRNYPASGMSVLLPIKLHAGHQKIIHSDILVCGGAAWDAFYYAEDKKQFWPALQDCGRIRITEPNPVWKKEMMPTRRVMGDMTILPTGDVLLVNGAQNGTSAWNDAEEPALAPALYKTKEKRHHRFQELAPTTIPRMYHSVSVLLPDGKVLIAGSNTHDGYKFDHKYPTELRVEKFSPPYLDPALAHLRPEIVLDKSDCMVGYGQRISIQVKTTEGIKQSDIRITMYAPAFTTHGTSMNQRLVILGLVEVRNDVAPGQHKIVAEAPPSGVITPPGYYLLYVVYKGVPSPGMWFQIK
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MHAILLPKVNQVLMYDATVWKISKIPLPQEKMPCRVIDPKTNEVDCWAHSVLFDIETAKLKPLKIQTDTWCSSGGLTVDGHLVGTGGYQGGANTVRYLWTCDTCDWIEYPTALAEPRWYSTQVTLPDGGFIVVGGRGAFSYEYIPPQGQSNKQSIYLPLLRETHDQLAGHFGTENFYRIENNLYPFVNLVTDGNLFIFSNNRSILFDPKANRVIREYPVLTGGSRNYPASGMSVLLPIKLHAGHQKIIHSDILVCGGAAWDAFYYAEDKKQFWPALQDCGRIRITEPNPVWKKEMMPTRRVMGDMTILPTGDVLLVNGAQNGTSAWNDAEEPALAPALYKTKEKRHHRFQELAPTTIPRMYHSVSVLLPDGKVLIAGSNTHDGYKFDHKYPTELRVEKFSPPYLDPALAHLRPEIVLDKSDCMVGYGQRISIQVKTTEGIKQSDIRITMYAPAFTTHGTSMNQRLVILGLVEVRNDVAPGQHKIVAEAPPSGVITPPGYYLLYVVYKGVPSPGMWFQIK
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query519 2.2.26 [Sep-21-2011]
I1S2N3680 Galactose oxidase OS=Gibb no no 0.393 0.3 0.282 3e-11
P0CS93680 Galactose oxidase OS=Gibb no no 0.393 0.3 0.282 3e-11
>sp|I1S2N3|GAOA_GIBZE Galactose oxidase OS=Gibberella zeae (strain PH-1 / ATCC MYA-4620 / FGSC 9075 / NRRL 31084) GN=GAOA PE=3 SV=1 Back     alignment and function desciption
 Score = 70.9 bits (172), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 65/230 (28%), Positives = 100/230 (43%), Gaps = 26/230 (11%)

Query: 285 TEPNPVWKKEMMPTRRVMGDMTILPTGDVLLVNGAQNGTSAWNDAEEPALAPALYKTKEK 344
           T PN V+    +   R      +LP G   +  G + G     +   P   P +Y  ++ 
Sbjct: 465 TSPNTVFASNGLYFARTFHTSVVLPDGSTFITGGQRRGIPF--EDSTPVFTPEIYVPEQD 522

Query: 345 RHHRFQELAPTTIPRMYHSVSVLLPDGKVLIAGSNTHDGYKFDHKYPTELRVEKFSPPYL 404
               F +  P +I R+YHS+S+LLPDG+V   G         +H        + F+P YL
Sbjct: 523 T---FYKQNPNSIVRVYHSISLLLPDGRVFNGGGGLCGDCTTNH-----FDAQIFTPNYL 574

Query: 405 DPALAHL--RPEIVLDKSDCMVGYGQRISIQVKTTEGIKQSDIRITMYAPAFTTHGTSMN 462
             +  +L  RP+I    +   V  G RI+I   ++   K S IR   Y  A  TH  + +
Sbjct: 575 YNSNGNLATRPKITRTSTQS-VKVGGRITISTDSSI-TKASLIR---YGTA--THTVNTD 627

Query: 463 QRLVILGLVEVRNDVAPGQHKIVAEAPPSGVITPPGYYLLYVVYK-GVPS 511
           QR + L L         G +    + P    +  PGY++L+V+   GVPS
Sbjct: 628 QRRIPLTLTN------NGGNSYSFQVPSDSGVALPGYWMLFVMNSAGVPS 671
Catalyzes the sterospecific oxidation of primary alcohols to the corresponding aldehydes. The biologically relevant substrate of the enzyme is not known as the enzyme exhibits broad substrate specificity from small alcohols through sugars to oligo- and polysaccharides (By similarity).
Gibberella zeae (strain PH-1 / ATCC MYA-4620 / FGSC 9075 / NRRL 31084) (taxid: 229533)
EC: 1EC: .EC: 1EC: .EC: 3EC: .EC: 9
>sp|P0CS93|GAOA_GIBZA Galactose oxidase OS=Gibberella zeae GN=GAOA PE=1 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query519
224119812609 predicted protein [Populus trichocarpa] 0.973 0.829 0.596 0.0
255546401613 Galactose oxidase precursor, putative [R 0.967 0.818 0.604 0.0
224142169522 predicted protein [Populus trichocarpa] 0.973 0.967 0.589 0.0
19310437594 AT5g19580/T20D1_100 [Arabidopsis thalian 0.967 0.845 0.587 1e-177
15241135594 glyoxal oxidase-related protein [Arabido 0.967 0.845 0.587 1e-177
15220398615 glyoxal oxidase-related protein [Arabido 0.971 0.819 0.578 1e-176
297812139596 hypothetical protein ARALYDRAFT_488852 [ 0.967 0.842 0.579 1e-175
362799981 645 glyoxal oxidase 5 [Linum grandiflorum] 0.969 0.779 0.574 1e-174
297841411599 hypothetical protein ARALYDRAFT_475824 [ 0.971 0.841 0.564 1e-172
362799955 693 glyoxal oxidase 2 [Linum grandiflorum] 0.971 0.727 0.563 1e-172
>gi|224119812|ref|XP_002331167.1| predicted protein [Populus trichocarpa] gi|222873250|gb|EEF10381.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
 Score =  647 bits (1669), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 311/521 (59%), Positives = 395/521 (75%), Gaps = 16/521 (3%)

Query: 1   MHAILLPKVNQVLMYDATVWKISKIPLPQEKMPCRVIDPKTNEVDCWAHSVLFDIETAKL 60
           MHAILLP+VN+VLMYDAT+WK S+I LP     CR+++  T E DC+ HSVLFD+ T  L
Sbjct: 103 MHAILLPRVNKVLMYDATIWKKSEIRLPTGH--CRLLNQTTGEKDCYCHSVLFDVATTAL 160

Query: 61  KPLKIQTDTWCSSGGLTVDGHLVGTGGYQGGANTVRYLWTCDTCDWIEYPTALAEPRWYS 120
            PL++ TDTWCSSGGL+VDG+LVGTGG+QGGANTVRYL TC  C+W E+PTALA+ RWYS
Sbjct: 161 TPLQLHTDTWCSSGGLSVDGNLVGTGGFQGGANTVRYLETCKGCNWREFPTALADRRWYS 220

Query: 121 TQVTLPDGGFIVVGGRGAFSYEYIPPQGQSNKQSIYLPLLRETHDQLAGHFGTENFYRIE 180
           TQ  LPDGGFIVVGGR AFSYEYIP +G SN +S +   L++T D            R E
Sbjct: 221 TQAELPDGGFIVVGGREAFSYEYIPREGDSNAKSYFFDFLKKTSD------------RDE 268

Query: 181 NNLYPFVNLVTDGNLFIFSNNRSILFDPKANRVIREYPVLTGGSRNYPASGMSVLLPIKL 240
           NNLYPFV+L TDGNLFIF+NNR++L +PK+N+V+RE+P L GG R+YPA+GMS LLPIKL
Sbjct: 269 NNLYPFVHLSTDGNLFIFANNRAVLLNPKSNKVVREFPALPGGHRSYPATGMSALLPIKL 328

Query: 241 HAGHQKIIHSDILVCGGAAWDAFYYAEDKKQFWPALQDCGRIRITEPNPVWKKEMMPTRR 300
           H+ +  +I +++LVCGG+     Y    +  F+ ALQDCGRIRIT+  PVWK+E+MP+ R
Sbjct: 329 HSKNNDVIPAEVLVCGGSGHKDAYTQASRDIFYTALQDCGRIRITDKKPVWKREIMPSPR 388

Query: 301 VMGDMTILPTGDVLLVNGAQNGTSAWNDAEEPALAPALYKTKEKRHHRFQELAPTTIPRM 360
           VMGDM ILPTGD+L++NGA+ G S W  A EP LAPA+Y  K K  +RF++L  + IPRM
Sbjct: 389 VMGDMVILPTGDILMLNGAKRGCSGWGFAREPNLAPAIYYPKAKLGNRFKQLKASIIPRM 448

Query: 361 YHSVSVLLPDGKVLIAGSNTHDGYKFDHKYPTELRVEKFSPPYLDPALAHLRPEIVLDKS 420
           YHS SV+LPDGKVL+AGSNT++GY ++  +PTELRVEKFSPPYLDP++A  RP IV DK+
Sbjct: 449 YHSSSVVLPDGKVLVAGSNTNNGYVYNAMFPTELRVEKFSPPYLDPSVAVHRPVIVTDKA 508

Query: 421 DCMVGYGQRISIQVKTTE-GIKQSDIRITMYAPAFTTHGTSMNQRLVILGLVEVRNDVA- 478
              + Y +   +Q+K+T   +++ DI++TMYAPAFTTHG SMNQRL+ LGL +V  + A 
Sbjct: 509 PEKISYDETFQLQIKSTAVKVEKKDIKVTMYAPAFTTHGVSMNQRLLDLGLEDVIAENAF 568

Query: 479 PGQHKIVAEAPPSGVITPPGYYLLYVVYKGVPSPGMWFQIK 519
            G H I   +PPSG + PPGYY+L+VV++GVPS   W QIK
Sbjct: 569 LGIHTITVVSPPSGKVAPPGYYMLFVVHQGVPSVSTWVQIK 609

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|255546401|ref|XP_002514260.1| Galactose oxidase precursor, putative [Ricinus communis] gi|223546716|gb|EEF48214.1| Galactose oxidase precursor, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|224142169|ref|XP_002324431.1| predicted protein [Populus trichocarpa] gi|222865865|gb|EEF02996.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|19310437|gb|AAL84955.1| AT5g19580/T20D1_100 [Arabidopsis thaliana] gi|24797058|gb|AAN64541.1| At5g19580/T20D1_100 [Arabidopsis thaliana] gi|110742638|dbj|BAE99231.1| hypothetical protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|15241135|ref|NP_197459.1| glyoxal oxidase-related protein [Arabidopsis thaliana] gi|332005344|gb|AED92727.1| glyoxal oxidase-related protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|15220398|ref|NP_176897.1| glyoxal oxidase-related protein [Arabidopsis thaliana] gi|9828629|gb|AAG00252.1|AC002130_17 F1N21.11 [Arabidopsis thaliana] gi|27754377|gb|AAO22637.1| putative glyoxal oxidase (glx1) [Arabidopsis thaliana] gi|28394059|gb|AAO42437.1| putative glyoxal oxidase (glx1) [Arabidopsis thaliana] gi|332196502|gb|AEE34623.1| glyoxal oxidase-related protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|297812139|ref|XP_002873953.1| hypothetical protein ARALYDRAFT_488852 [Arabidopsis lyrata subsp. lyrata] gi|297319790|gb|EFH50212.1| hypothetical protein ARALYDRAFT_488852 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|362799981|dbj|BAL41454.1| glyoxal oxidase 5 [Linum grandiflorum] Back     alignment and taxonomy information
>gi|297841411|ref|XP_002888587.1| hypothetical protein ARALYDRAFT_475824 [Arabidopsis lyrata subsp. lyrata] gi|297334428|gb|EFH64846.1| hypothetical protein ARALYDRAFT_475824 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|362799955|dbj|BAL41451.1| glyoxal oxidase 2 [Linum grandiflorum] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query519
TAIR|locus:2180791594 AT5G19580 "AT5G19580" [Arabido 0.967 0.845 0.581 6.5e-161
TAIR|locus:2019564615 GLOX1 "AT1G67290" [Arabidopsis 0.969 0.817 0.569 5.3e-159
TAIR|locus:2035408548 AT1G19900 "AT1G19900" [Arabido 0.955 0.905 0.425 6.7e-104
TAIR|locus:2084480545 AT3G53950 "AT3G53950" [Arabido 0.874 0.833 0.404 8.5e-81
TAIR|locus:2076696547 AT3G57620 "AT3G57620" [Arabido 0.612 0.581 0.452 7.5e-73
TAIR|locus:2005664547 AT1G75620 "AT1G75620" [Arabido 0.635 0.603 0.437 4.8e-71
UNIPROTKB|G4MQZ0669 MGG_02368 "Galactose oxidase" 0.410 0.318 0.278 7.6e-08
TAIR|locus:2180791 AT5G19580 "AT5G19580" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1567 (556.7 bits), Expect = 6.5e-161, P = 6.5e-161
 Identities = 302/519 (58%), Positives = 373/519 (71%)

Query:     1 MHAILLPKVNQVLMYDATVWKISKIPLPQEKMPCRVIDPKTNEVDCWAHSVLFDIETAKL 60
             MHAIL+P +N+V  YDAT+W+ISKI LP   +PC V+D KTN+VDCWAHS+L D+ T  L
Sbjct:    91 MHAILMPVINKVQYYDATIWRISKIKLPPG-VPCHVVDAKTNKVDCWAHSILMDVNTGAL 149

Query:    61 KPLKIQTDTWCSSGGLTVDGHLVGTGGYQGGANTVRYLWTCDTCDWIEYPTALAEPRWYS 120
             KPL + TDTWCSSGGLTV+G LV TGGY GGANT RYL +C+ C W EYP ALA  RWYS
Sbjct:   150 KPLGLSTDTWCSSGGLTVNGTLVSTGGYGGGANTARYLSSCENCKWEEYPQALAAKRWYS 209

Query:   121 TQVTLPDGGFIVVGGRGAFSYEYIPPQGQSNKQSIYLPLLRETHDQLAGHFGTENFYRIE 180
             TQ TLPDG F V+GGR A +YEYIP +GQ+N++     LLR+T D        E     E
Sbjct:   210 TQATLPDGKFFVIGGRDALNYEYIPEEGQNNRKLFDSLLLRQTDDP-------E-----E 257

Query:   181 NNLYPFVNLVTDGNLFIFSNNRSILFDPKANRVIREYPVLTGGSRNYPASGMSVLLPIKL 240
             NNLYPFV L TDGNLFIF+NNRSIL  PK N+VI+E+P L GG+RNYP SG S LLPI+L
Sbjct:   258 NNLYPFVWLNTDGNLFIFANNRSILLSPKTNQVIKEFPQLPGGARNYPGSGSSALLPIQL 317

Query:   241 HAGHQKIIHSDILVCGGAAWDAFYYAEDKKQFWPALQDCGRIRITEPNPVWKKEMMPTRR 300
             +  + K+I +++LVCGG+  DA+Y A  KK + PALQDC RIRI    P WK EMMPT R
Sbjct:   318 YVKNPKVIPAEVLVCGGSKQDAYYKA-GKKIYEPALQDCARIRINSAKPRWKTEMMPTPR 376

Query:   301 VMGDMTILPTGDVLLVNGAQNGTSAWNDAEEPALAPALYKTKEKRHHRFQELAPTTIPRM 360
             +M D  ILP GD+LLVNGA+ G S W   ++PA AP LYK    R  RF++L PTTIPRM
Sbjct:   377 IMSDTVILPNGDILLVNGAKRGCSGWGYGKDPAFAPLLYKPHAARGKRFRQLKPTTIPRM 436

Query:   361 YHSVSVLLPDGKVLIAGSNTHDGYKFDHKYPTELRVEKFSPPYLDPALAHLRPEIVLDKS 420
             YHS +++LPDGKVL+ GSNT+DGYK++ ++PTELRVEKFSPPYLDPALA++RP+IV   +
Sbjct:   437 YHSSAIILPDGKVLVGGSNTNDGYKYNVEFPTELRVEKFSPPYLDPALANIRPKIVTTGT 496

Query:   421 DCMVGYGQRISIQVKTTE-GIKQSDIRITMYAPAFTTHGTSMNQRLVILGLVEVRNDVAP 479
                V YGQ  +++V   E G  + ++++TM APAFTTH  SMN R++ILG+  V+   A 
Sbjct:   497 PKQVKYGQFFNVKVDLKEKGATKGNLKVTMLAPAFTTHSISMNMRMLILGVNNVKP--AG 554

Query:   480 GQHKIVAEAPPSGVITPPGXXXXXXXXKGVPSPGMWFQI 518
               + I A APP+G I PPG        KGVPS G W Q+
Sbjct:   555 AGYDIQAVAPPNGNIAPPGYYLIFAIYKGVPSTGEWIQV 593
GO:0003674 "molecular_function" evidence=ND
GO:0005576 "extracellular region" evidence=ISM
GO:0008150 "biological_process" evidence=ND
GO:0009827 "plant-type cell wall modification" evidence=RCA
GO:0009860 "pollen tube growth" evidence=RCA
TAIR|locus:2019564 GLOX1 "AT1G67290" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2035408 AT1G19900 "AT1G19900" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2084480 AT3G53950 "AT3G53950" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2076696 AT3G57620 "AT3G57620" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2005664 AT1G75620 "AT1G75620" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|G4MQZ0 MGG_02368 "Galactose oxidase" [Magnaporthe oryzae 70-15 (taxid:242507)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query519
pfam07250243 pfam07250, Glyoxal_oxid_N, Glyoxal oxidase N-termi 1e-111
cd02851103 cd02851, E_set_GO_C, C-terminal Early set domain a 2e-23
pfam0911897 pfam09118, DUF1929, Domain of unknown function (DU 5e-22
>gnl|CDD|219349 pfam07250, Glyoxal_oxid_N, Glyoxal oxidase N-terminus Back     alignment and domain information 
 Score =  329 bits (846), Expect = e-111
 Identities = 133/262 (50%), Positives = 167/262 (63%), Gaps = 24/262 (9%)

Query: 1   MHAILLPKVNQVLMYDATVWKISKIPLPQEKMPCRVIDPK--TNEVDCWAHSVLFDIETA 58
           MH  LL   N+V+M+D T +  S I LP  +  CR  DP     ++DC AHSVL+D+ T 
Sbjct: 1   MHMQLL-HNNKVIMFDRTNFGPSNISLPPGR--CRP-DPGDAPLKIDCSAHSVLYDVATN 56

Query: 59  KLKPLKIQTDTWCSSGGLTVDGHLVGTGGYQGGANTVRYLWTCD---TCDWIEYPTALAE 115
            ++PL +QTDTWCSSG L  DG LV TGG   G   VRY   CD   TCDWIE+P  LA 
Sbjct: 57  TIRPLTVQTDTWCSSGALLSDGTLVQTGGDGDGERKVRYFSPCDSNDTCDWIEFPATLAA 116

Query: 116 PRWYSTQVTLPDGGFIVVGGRGAFSYEYIPPQGQSNKQSIYLPLLRETHDQLAGHFGTEN 175
            RWY+T   LPDG FI++GGR AF+YE+ P +GQ+ + S  L  LRET D          
Sbjct: 117 RRWYATNQILPDGSFIIIGGRRAFNYEFFPKKGQNPRAS-ALRFLRETEDSQ-------- 167

Query: 176 FYRIENNLYPFVNLVTDGNLFIFSNNRSILFDPKANRVIREYPVLTGGSRNYPASGMSVL 235
               ENNLYPFV L+ DGNLFIF+NNRSILFD + N V++E+P + GG RNYP+SG SVL
Sbjct: 168 ----ENNLYPFVFLLPDGNLFIFANNRSILFDYRKNTVVKEFPQIPGGPRNYPSSGSSVL 223

Query: 236 LPIKLHAGHQKIIHSDILVCGG 257
           LP+         + +++LVCGG
Sbjct: 224 LPLDDRNP--DNLTAEVLVCGG 243

This family represents the N-terminus (approximately 300 residues) of a number of plant and fungal glyoxal oxidase enzymes. Glyoxal oxidase catalyzes the oxidation of aldehydes to carboxylic acids, coupled with reduction of dioxygen to hydrogen peroxide. It is an essential component of the extracellular lignin degradation pathways of the wood-rot fungus Phanerochaete chrysosporium. Length = 243
>gnl|CDD|199882 cd02851, E_set_GO_C, C-terminal Early set domain associated with the catalytic domain of galactose oxidase Back     alignment and domain information
>gnl|CDD|220118 pfam09118, DUF1929, Domain of unknown function (DUF1929) Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 519
PF07250243 Glyoxal_oxid_N: Glyoxal oxidase N-terminus; InterP 100.0
KOG4441571 consensus Proteins containing BTB/POZ and Kelch do 100.0
KOG4441571 consensus Proteins containing BTB/POZ and Kelch do 100.0
cd02851101 Galactose_oxidase_C_term Galactose oxidase C-termi 100.0
PHA02713557 hypothetical protein; Provisional 100.0
PF0911898 DUF1929: Domain of unknown function (DUF1929); Int 100.0
PHA02713557 hypothetical protein; Provisional 100.0
TIGR03547346 muta_rot_YjhT mutatrotase, YjhT family. Members of 99.97
PRK14131376 N-acetylneuraminic acid mutarotase; Provisional 99.96
PHA02790480 Kelch-like protein; Provisional 99.96
PLN02153341 epithiospecifier protein 99.96
TIGR03548323 mutarot_permut cyclically-permuted mutatrotase fam 99.95
PHA02790480 Kelch-like protein; Provisional 99.95
PHA03098534 kelch-like protein; Provisional 99.94
TIGR03547346 muta_rot_YjhT mutatrotase, YjhT family. Members of 99.94
PLN02193470 nitrile-specifier protein 99.93
TIGR03548323 mutarot_permut cyclically-permuted mutatrotase fam 99.93
PHA03098534 kelch-like protein; Provisional 99.93
PRK14131376 N-acetylneuraminic acid mutarotase; Provisional 99.93
PLN02193470 nitrile-specifier protein 99.92
PLN02153341 epithiospecifier protein 99.92
KOG4693392 consensus Uncharacterized conserved protein, conta 99.74
KOG4693392 consensus Uncharacterized conserved protein, conta 99.66
KOG0379482 consensus Kelch repeat-containing proteins [Genera 99.39
KOG0379482 consensus Kelch repeat-containing proteins [Genera 99.36
KOG1230521 consensus Protein containing repeated kelch motifs 99.12
KOG4152 830 consensus Host cell transcription factor HCFC1 [Ce 99.12
PF07250243 Glyoxal_oxid_N: Glyoxal oxidase N-terminus; InterP 99.12
COG3055381 Uncharacterized protein conserved in bacteria [Fun 99.08
COG3055381 Uncharacterized protein conserved in bacteria [Fun 98.85
KOG4152 830 consensus Host cell transcription factor HCFC1 [Ce 98.84
PF1396450 Kelch_6: Kelch motif 98.83
KOG1230 521 consensus Protein containing repeated kelch motifs 98.82
smart0061247 Kelch Kelch domain. 98.45
PF0134447 Kelch_1: Kelch motif; InterPro: IPR006652 Kelch is 98.41
PF1396450 Kelch_6: Kelch motif 98.27
PF1341849 Kelch_4: Galactose oxidase, central domain; PDB: 2 98.09
smart0061247 Kelch Kelch domain. 98.04
PF1341549 Kelch_3: Galactose oxidase, central domain 98.02
PF0764649 Kelch_2: Kelch motif; InterPro: IPR011498 Kelch is 97.96
PF1341549 Kelch_3: Galactose oxidase, central domain 97.59
PF0134447 Kelch_1: Kelch motif; InterPro: IPR006652 Kelch is 97.57
PLN02772 398 guanylate kinase 97.12
PF0764649 Kelch_2: Kelch motif; InterPro: IPR011498 Kelch is 97.11
PF1341849 Kelch_4: Galactose oxidase, central domain; PDB: 2 96.93
PLN02772398 guanylate kinase 96.56
KOG0286343 consensus G-protein beta subunit [General function 95.84
PRK11138394 outer membrane biogenesis protein BamB; Provisiona 95.57
COG4257353 Vgb Streptogramin lyase [Defense mechanisms] 95.28
PF1385442 Kelch_5: Kelch motif 95.25
KOG0286343 consensus G-protein beta subunit [General function 94.28
PRK11138394 outer membrane biogenesis protein BamB; Provisiona 94.0
cd00200289 WD40 WD40 domain, found in a number of eukaryotic 93.96
KOG0310487 consensus Conserved WD40 repeat-containing protein 93.32
TIGR01640230 F_box_assoc_1 F-box protein interaction domain. Th 93.06
TIGR03866300 PQQ_ABC_repeats PQQ-dependent catabolism-associate 92.76
PF1385442 Kelch_5: Kelch motif 92.46
TIGR03866300 PQQ_ABC_repeats PQQ-dependent catabolism-associate 92.44
KOG2437 723 consensus Muskelin [Signal transduction mechanisms 92.14
KOG0315311 consensus G-protein beta subunit-like protein (con 91.12
PF10282345 Lactonase: Lactonase, 7-bladed beta-propeller; Int 91.07
TIGR01640230 F_box_assoc_1 F-box protein interaction domain. Th 90.28
PRK11028330 6-phosphogluconolactonase; Provisional 89.33
PLN00181793 protein SPA1-RELATED; Provisional 89.13
KOG0310487 consensus Conserved WD40 repeat-containing protein 88.8
PF08450246 SGL: SMP-30/Gluconolaconase/LRE-like region; Inter 87.99
PF13360238 PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A 87.66
PF07893342 DUF1668: Protein of unknown function (DUF1668); In 87.31
KOG2437723 consensus Muskelin [Signal transduction mechanisms 86.84
PRK13684334 Ycf48-like protein; Provisional 86.24
PF07893342 DUF1668: Protein of unknown function (DUF1668); In 84.84
TIGR03300377 assembly_YfgL outer membrane assembly lipoprotein 82.05
COG5184476 ATS1 Alpha-tubulin suppressor and related RCC1 dom 81.15
>PF07250 Glyoxal_oxid_N: Glyoxal oxidase N-terminus; InterPro: IPR009880 This entry represents the N terminus (approximately 300 residues) of a number of plant and fungal glyoxal oxidase enzymes Back     alignment and domain information 
Probab=100.00  E-value=1e-51  Score=399.76  Aligned_cols=237  Identities=47%  Similarity=0.863  Sum_probs=214.3

Q ss_pred             CeeeeeCCCCEEEEEecccccccCcCCCCCCCCccccCC-CCCCCccceeEEEEECCCCcEEECccCCCcccCCCeeccC
Q 042303            1 MHAILLPKVNQVLMYDATVWKISKIPLPQEKMPCRVIDP-KTNEVDCWAHSVLFDIETAKLKPLKIQTDTWCSSGGLTVD   79 (519)
Q Consensus         1 ~h~~ll~~~g~vl~~~~~~~g~~~~~~~~g~~~~~~~~~-~~~~~~~~~~~~~yDp~t~~w~~l~~~~~~~c~~~~~l~d   79 (519)
                      |||+|| ++|||++||++++|+|++.+|+|  +||+++. ..++.||++|+.+|||.|++++++...+|.||+++++|+|
T Consensus         1 mh~~~~-~~~~v~~~d~t~~g~s~~~~~~~--~c~~~~~~~~~~~d~~a~s~~yD~~tn~~rpl~v~td~FCSgg~~L~d   77 (243)
T PF07250_consen    1 MHMALL-HNNKVIMFDRTNFGPSNISLPDG--RCRDNPEDNALKFDGPAHSVEYDPNTNTFRPLTVQTDTFCSGGAFLPD   77 (243)
T ss_pred             CeEeEc-cCCEEEEEeCCCcccccccCCCC--ccccCccccccccCceEEEEEEecCCCcEEeccCCCCCcccCcCCCCC
Confidence            999999 99999999999999999999999  9999888 8889999999999999999999999999999999999999


Q ss_pred             CeEEEecCCCCCCceEEEEeCCC---CCccccCCCCCCCccccceEEEcCCCcEEEEcCCCCCceEEeCCCCCCCCcccc
Q 042303           80 GHLVGTGGYQGGANTVRYLWTCD---TCDWIEYPTALAEPRWYSTQVTLPDGGFIVVGGRGAFSYEYIPPQGQSNKQSIY  156 (519)
Q Consensus        80 G~llv~GG~~~g~~~v~~ydp~~---~~~W~~~~~~m~~~R~y~s~~~L~dG~V~viGG~~~~~~E~yP~~~~w~~~~~~  156 (519)
                      |+++++||+.+|.+.++.|+|+.   +++|.+..+.|..+|||+|+++|+||+|+|+||+..+++|+||.... ......
T Consensus        78 G~ll~tGG~~~G~~~ir~~~p~~~~~~~~w~e~~~~m~~~RWYpT~~~L~DG~vlIvGG~~~~t~E~~P~~~~-~~~~~~  156 (243)
T PF07250_consen   78 GRLLQTGGDNDGNKAIRIFTPCTSDGTCDWTESPNDMQSGRWYPTATTLPDGRVLIVGGSNNPTYEFWPPKGP-GPGPVT  156 (243)
T ss_pred             CCEEEeCCCCccccceEEEecCCCCCCCCceECcccccCCCccccceECCCCCEEEEeCcCCCcccccCCccC-CCCcee
Confidence            99999999999999999999983   48999887669999999999999999999999999999999976432 222344


Q ss_pred             cccchhccccccCCcccccccccccCccceEEEeeCCcEEEEeCCceEEeeCCCCeEEEEccCCCCCCCccCCCCcEEec
Q 042303          157 LPLLRETHDQLAGHFGTENFYRIENNLYPFVNLVTDGNLFIFSNNRSILFDPKANRVIREYPVLTGGSRNYPASGMSVLL  236 (519)
Q Consensus       157 ~p~l~~t~~~~~g~~~~~~~~~~~~~~yp~~~~~~~G~Ifv~Gg~~~~~yDp~t~~w~~~~p~~p~~~r~~~~~g~av~l  236 (519)
                      ++++..+.+.            .++|+||++++++||+||+++++.+++||++++++++.+|.||++.|+||.+|++|||
T Consensus       157 ~~~l~~~~~~------------~~~nlYP~~~llPdG~lFi~an~~s~i~d~~~n~v~~~lP~lPg~~R~YP~sgssvmL  224 (243)
T PF07250_consen  157 LPFLSQTSDT------------LPNNLYPFVHLLPDGNLFIFANRGSIIYDYKTNTVVRTLPDLPGGPRNYPASGSSVML  224 (243)
T ss_pred             eecchhhhcc------------CccccCceEEEcCCCCEEEEEcCCcEEEeCCCCeEEeeCCCCCCCceecCCCcceEEe
Confidence            5666555432            4689999999999999999999999999999999878899999999999999999999


Q ss_pred             cc--ccccCCccccCCeEEEEcC
Q 042303          237 PI--KLHAGHQKIIHSDILVCGG  257 (519)
Q Consensus       237 ~l--~~~~~~~~~~~gkI~v~GG  257 (519)
                      ||  .+    .+++..+|++|||
T Consensus       225 Pl~~~~----~~~~~~evlvCGG  243 (243)
T PF07250_consen  225 PLTDTP----PNNYTAEVLVCGG  243 (243)
T ss_pred             cCccCC----CCCCCeEEEEeCC
Confidence            99  53    4578999999998

Glyoxal oxidase catalyses the oxidation of aldehydes to carboxylic acids, coupled with reduction of dioxygen to hydrogen peroxide. It is an essential component of the extracellular lignin degradation pathways of the wood-rot fungus Phanerochaete chrysosporium [].
>KOG4441 consensus Proteins containing BTB/POZ and Kelch domains, involved in regulatory/signal transduction processes [Signal transduction mechanisms; General function prediction only] Back     alignment and domain information
>KOG4441 consensus Proteins containing BTB/POZ and Kelch domains, involved in regulatory/signal transduction processes [Signal transduction mechanisms; General function prediction only] Back     alignment and domain information
>cd02851 Galactose_oxidase_C_term Galactose oxidase C-terminus domain Back     alignment and domain information
>PHA02713 hypothetical protein; Provisional Back     alignment and domain information
>PF09118 DUF1929: Domain of unknown function (DUF1929); InterPro: IPR015202 This domain adopts a secondary structure consisting of a bundle of seven, mostly antiparallel, beta-strands surrounding a hydrophobic core Back     alignment and domain information
>PHA02713 hypothetical protein; Provisional Back     alignment and domain information
>TIGR03547 muta_rot_YjhT mutatrotase, YjhT family Back     alignment and domain information
>PRK14131 N-acetylneuraminic acid mutarotase; Provisional Back     alignment and domain information
>PHA02790 Kelch-like protein; Provisional Back     alignment and domain information
>PLN02153 epithiospecifier protein Back     alignment and domain information
>TIGR03548 mutarot_permut cyclically-permuted mutatrotase family protein Back     alignment and domain information
>PHA02790 Kelch-like protein; Provisional Back     alignment and domain information
>PHA03098 kelch-like protein; Provisional Back     alignment and domain information
>TIGR03547 muta_rot_YjhT mutatrotase, YjhT family Back     alignment and domain information
>PLN02193 nitrile-specifier protein Back     alignment and domain information
>TIGR03548 mutarot_permut cyclically-permuted mutatrotase family protein Back     alignment and domain information
>PHA03098 kelch-like protein; Provisional Back     alignment and domain information
>PRK14131 N-acetylneuraminic acid mutarotase; Provisional Back     alignment and domain information
>PLN02193 nitrile-specifier protein Back     alignment and domain information
>PLN02153 epithiospecifier protein Back     alignment and domain information
>KOG4693 consensus Uncharacterized conserved protein, contains kelch repeat [General function prediction only] Back     alignment and domain information
>KOG4693 consensus Uncharacterized conserved protein, contains kelch repeat [General function prediction only] Back     alignment and domain information
>KOG0379 consensus Kelch repeat-containing proteins [General function prediction only] Back     alignment and domain information
>KOG0379 consensus Kelch repeat-containing proteins [General function prediction only] Back     alignment and domain information
>KOG1230 consensus Protein containing repeated kelch motifs [General function prediction only] Back     alignment and domain information
>KOG4152 consensus Host cell transcription factor HCFC1 [Cell cycle control, cell division, chromosome partitioning; Transcription] Back     alignment and domain information
>PF07250 Glyoxal_oxid_N: Glyoxal oxidase N-terminus; InterPro: IPR009880 This entry represents the N terminus (approximately 300 residues) of a number of plant and fungal glyoxal oxidase enzymes Back     alignment and domain information
>COG3055 Uncharacterized protein conserved in bacteria [Function unknown] Back     alignment and domain information
>COG3055 Uncharacterized protein conserved in bacteria [Function unknown] Back     alignment and domain information
>KOG4152 consensus Host cell transcription factor HCFC1 [Cell cycle control, cell division, chromosome partitioning; Transcription] Back     alignment and domain information
>PF13964 Kelch_6: Kelch motif Back     alignment and domain information
>KOG1230 consensus Protein containing repeated kelch motifs [General function prediction only] Back     alignment and domain information
>smart00612 Kelch Kelch domain Back     alignment and domain information
>PF01344 Kelch_1: Kelch motif; InterPro: IPR006652 Kelch is a 50-residue motif, named after the Drosophila mutant in which it was first identified [] Back     alignment and domain information
>PF13964 Kelch_6: Kelch motif Back     alignment and domain information
>PF13418 Kelch_4: Galactose oxidase, central domain; PDB: 2UVK_B Back     alignment and domain information
>smart00612 Kelch Kelch domain Back     alignment and domain information
>PF13415 Kelch_3: Galactose oxidase, central domain Back     alignment and domain information
>PF07646 Kelch_2: Kelch motif; InterPro: IPR011498 Kelch is a 50-residue motif, named after the Drosophila mutant in which it was first identified [] Back     alignment and domain information
>PF13415 Kelch_3: Galactose oxidase, central domain Back     alignment and domain information
>PF01344 Kelch_1: Kelch motif; InterPro: IPR006652 Kelch is a 50-residue motif, named after the Drosophila mutant in which it was first identified [] Back     alignment and domain information
>PLN02772 guanylate kinase Back     alignment and domain information
>PF07646 Kelch_2: Kelch motif; InterPro: IPR011498 Kelch is a 50-residue motif, named after the Drosophila mutant in which it was first identified [] Back     alignment and domain information
>PF13418 Kelch_4: Galactose oxidase, central domain; PDB: 2UVK_B Back     alignment and domain information
>PLN02772 guanylate kinase Back     alignment and domain information
>KOG0286 consensus G-protein beta subunit [General function prediction only] Back     alignment and domain information
>PRK11138 outer membrane biogenesis protein BamB; Provisional Back     alignment and domain information
>COG4257 Vgb Streptogramin lyase [Defense mechanisms] Back     alignment and domain information
>PF13854 Kelch_5: Kelch motif Back     alignment and domain information
>KOG0286 consensus G-protein beta subunit [General function prediction only] Back     alignment and domain information
>PRK11138 outer membrane biogenesis protein BamB; Provisional Back     alignment and domain information
>cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto Back     alignment and domain information
>KOG0310 consensus Conserved WD40 repeat-containing protein [Function unknown] Back     alignment and domain information
>TIGR01640 F_box_assoc_1 F-box protein interaction domain Back     alignment and domain information
>TIGR03866 PQQ_ABC_repeats PQQ-dependent catabolism-associated beta-propeller protein Back     alignment and domain information
>PF13854 Kelch_5: Kelch motif Back     alignment and domain information
>TIGR03866 PQQ_ABC_repeats PQQ-dependent catabolism-associated beta-propeller protein Back     alignment and domain information
>KOG2437 consensus Muskelin [Signal transduction mechanisms] Back     alignment and domain information
>KOG0315 consensus G-protein beta subunit-like protein (contains WD40 repeats) [General function prediction only] Back     alignment and domain information
>PF10282 Lactonase: Lactonase, 7-bladed beta-propeller; InterPro: IPR019405 6-phosphogluconolactonases (6PGL) 3 Back     alignment and domain information
>TIGR01640 F_box_assoc_1 F-box protein interaction domain Back     alignment and domain information
>PRK11028 6-phosphogluconolactonase; Provisional Back     alignment and domain information
>PLN00181 protein SPA1-RELATED; Provisional Back     alignment and domain information
>KOG0310 consensus Conserved WD40 repeat-containing protein [Function unknown] Back     alignment and domain information
>PF08450 SGL: SMP-30/Gluconolaconase/LRE-like region; InterPro: IPR013658 This family describes a region that is found in proteins expressed by a variety of eukaryotic and prokaryotic species Back     alignment and domain information
>PF13360 PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A 3Q54_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A Back     alignment and domain information
>PF07893 DUF1668: Protein of unknown function (DUF1668); InterPro: IPR012871 The hypothetical proteins found in this family are expressed by Oryza sativa (Rice) and are of unknown function Back     alignment and domain information
>KOG2437 consensus Muskelin [Signal transduction mechanisms] Back     alignment and domain information
>PRK13684 Ycf48-like protein; Provisional Back     alignment and domain information
>PF07893 DUF1668: Protein of unknown function (DUF1668); InterPro: IPR012871 The hypothetical proteins found in this family are expressed by Oryza sativa (Rice) and are of unknown function Back     alignment and domain information
>TIGR03300 assembly_YfgL outer membrane assembly lipoprotein YfgL Back     alignment and domain information
>COG5184 ATS1 Alpha-tubulin suppressor and related RCC1 domain-containing proteins [Cell division and chromosome partitioning / Cytoskeleton] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query519
2eic_A639 Crystal Structure Of Galactose Oxidase Mutant W290f 2e-09
2eie_A639 Crystal Structure Of Galactose Oxidase Complexed Wi 3e-09
2eib_A639 Crystal Structure Of Galactose Oxidase, W290h Mutan 3e-09
2eid_A639 Galactose Oxidase W290g Mutant Length = 639 3e-09
1k3i_A656 Crystal Structure Of The Precursor Of Galactose Oxi 3e-09
1t2x_A639 Glactose Oxidase C383s Mutant Identified By Directe 3e-09
2wq8_A661 Glycan Labelling Using Engineered Variants Of Galac 5e-09
>pdb|2EIC|A Chain A, Crystal Structure Of Galactose Oxidase Mutant W290f Length = 639 Back     alignment and structure 
Iteration: 1

 Score = 60.5 bits (145), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 99/417 (23%), Positives = 160/417 (38%), Gaps = 57/417 (13%)
Query: 68  DTWCSSGGLTVDGHLVGTGGYQGGANTVRYLWTCDTCDWIEYPTALAEPRWYSTQVTLPD 127
           D +C    +  +G +V TGG      +   L+   +  WI  P  +   R Y +  T+ D
Sbjct: 225 DMFCPGISMDGNGQIVVTGGNDAKKTS---LYDSSSDSWIPGPD-MQVARGYQSSATMSD 280
Query: 128 GGFIVVGGRGAFSYEYIPPQGQ----SNKQSIYLPLLRETHDQLAGHFGTENFYRIENNL 183
           G    +GG  +FS       G+    S+K    LP  +      A   G    YR +N+ 
Sbjct: 281 GRVFTIGG--SFSGGVFEKNGEVYSPSSKTWTSLPNAKVNPMLTADKQG---LYRSDNHA 335
Query: 184 YPFVNLVTDGNLFIFSNNRSILFDPKANRVIREYPVLTGGSRNYPASGMSV----LLPIK 239
           +            +F   +  +F    +  +  Y   T GS +  ++G       + P  
Sbjct: 336 W------------LFGWKKGSVFQAGPSTAMNWY--YTSGSGDVKSAGKRQSNRGVAPDA 381
Query: 240 L--HAGHQKIIHSDILVCGGAAWDAFYYAEDKKQFWPALQDCGRIRITEPNPVWKKEMMP 297
           +  +A     +   IL  GG+      Y +        +   G    T PN V+    + 
Sbjct: 382 MCGNAVMYDAVKGKILTFGGSP----DYQDSDATTNAHIITLGEPG-TSPNTVFASNGLY 436
Query: 298 TRRVMGDMTILPTGDVLLVNGAQNGTSAWNDAEEPALAPALYKTKEKRHHRFQELAPTTI 357
             R      +LP G   +  G + G     +   P   P +Y  ++     F +  P +I
Sbjct: 437 FARTFHTSVVLPDGSTFITGGQRRGIPF--EDSTPVFTPEIYVPEQDT---FYKQNPNSI 491
Query: 358 PRMYHSVSVLLPDGKVLIAGSNTHDGYKFDHKYPTELRVEKFSPPYLDPALAHL--RPEI 415
            R+YHS+S+LLPDG+V   G         +H        + F+P YL  +  +L  RP+I
Sbjct: 492 VRVYHSISLLLPDGRVFNGGGGLCGDCTTNH-----FDAQIFTPNYLYNSNGNLATRPKI 546
Query: 416 VLDKSDCMVGYGQRISIQVKTTEGIKQSDIRITMYAPAFTTHGTSMNQRLVILGLVE 472
               +   V  G RI+I   ++   K S IR   Y  A  TH  + +QR + L L  
Sbjct: 547 TRTSTQS-VKVGGRITISTDSSIS-KASLIR---YGTA--THTVNTDQRRIPLTLTN 596
>pdb|2EIE|A Chain A, Crystal Structure Of Galactose Oxidase Complexed With Azide Length = 639 Back     alignment and structure
>pdb|2EIB|A Chain A, Crystal Structure Of Galactose Oxidase, W290h Mutant Length = 639 Back     alignment and structure
>pdb|2EID|A Chain A, Galactose Oxidase W290g Mutant Length = 639 Back     alignment and structure
>pdb|1K3I|A Chain A, Crystal Structure Of The Precursor Of Galactose Oxidase Length = 656 Back     alignment and structure
>pdb|1T2X|A Chain A, Glactose Oxidase C383s Mutant Identified By Directed Evolution Length = 639 Back     alignment and structure
>pdb|2WQ8|A Chain A, Glycan Labelling Using Engineered Variants Of Galactose Oxidase Obtained By Directed Evolution Length = 661 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query519
1k3i_A656 Galactose oxidase precursor; blade beta propeller, 2e-77
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 8e-06
2zwa_A695 Leucine carboxyl methyltransferase 2; HET: SAH CIT 5e-04
2zwa_A695 Leucine carboxyl methyltransferase 2; HET: SAH CIT 8e-04
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A Length = 656 Back     alignment and structure
 Score =  255 bits (651), Expect = 2e-77
 Identities = 97/485 (20%), Positives = 171/485 (35%), Gaps = 54/485 (11%)

Query: 42  NEVDCWAHSVLFDIETAKLKPLKIQTDTWCSSGGLTVDGHLVGTGGYQGGANTVRYLWTC 101
             +   +         +       + D +C    +  +G +V TGG          L+  
Sbjct: 216 GGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAKKT---SLYDS 272

Query: 102 DTCDWIEYPTALAEPRWYSTQVTLPDGGFIVVGGRGA-----FSYEYIPPQGQSNKQSIY 156
            +  WI  P  +   R Y +  T+ DG    +GG  +      + E   P   S+K    
Sbjct: 273 SSDSWIPGPD-MQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSP---SSKTWTS 328

Query: 157 LPLLRETHDQLAGHFGTENFYRIENNLYPFVNLVTDGNLFIFSNNRSILFDPKANRVIRE 216
           LP  +      A     +  YR  ++ + ++     G++F    + ++ +   +     +
Sbjct: 329 LPNAKVNPMLTADK---QGLYR--SDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVK 383

Query: 217 YPVLTGGSRNYPASGMSVLLPIKLHAGHQKIIHSDILVCGGAAWDAFYYAEDKKQFWPAL 276
                  +R      M        +A     +   IL  GG+       A         L
Sbjct: 384 SAGKRQSNRGVAPDAMC------GNAVMYDAVKGKILTFGGSPDYQDSDATTNA-HIITL 436

Query: 277 QDCGRIRITEPNPVWKKEMMPTRRVMGDMTILPTGDVLLVNGAQNGTSAWNDAEEPALAP 336
            + G    T PN V+    +   R      +LP G   +  G + G    +    P   P
Sbjct: 437 GEPG----TSPNTVFASNGLYFARTFHTSVVLPDGSTFITGGQRRGIPFEDST--PVFTP 490

Query: 337 ALYKTKEKRHHRFQELAPTTIPRMYHSVSVLLPDGKVLIAGSNTHDGYKFDHKYPTELRV 396
            +Y  ++     F +  P +I R+YHS+S+LLPDG+V   G                   
Sbjct: 491 EIYVPEQD---TFYKQNPNSIVRVYHSISLLLPDGRVFNGGGGLCGDC-----TTNHFDA 542

Query: 397 EKFSPPYLDPA--LAHLRPEIVLDKSDCMVGYGQRISIQVKTTEGIKQSDIRITMYAPAF 454
           + F+P YL  +      RP+I    +   V  G RI+I   +      S  + ++     
Sbjct: 543 QIFTPNYLYNSNGNLATRPKITRTSTQ-SVKVGGRITISTDS------SISKASLIRYGT 595

Query: 455 TTHGTSMNQRLVILGLVEVRNDVAPGQHKIVAEAPPSGVITPPGYYLLYVVY-KGVPSPG 513
            TH  + +QR + L L         G +    + P    +  PGY++L+V+   GVPS  
Sbjct: 596 ATHTVNTDQRRIPLTL------TNNGGNSYSFQVPSDSGVALPGYWMLFVMNSAGVPSVA 649

Query: 514 MWFQI 518
              ++
Sbjct: 650 STIRV 654
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A* Length = 695 Back     alignment and structure
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A* Length = 695 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query519
1k3i_A656 Galactose oxidase precursor; blade beta propeller, 100.0
2xn4_A302 Kelch-like protein 2; structural protein, cytoskel 100.0
1zgk_A308 Kelch-like ECH-associated protein 1; beta-propelle 100.0
3ii7_A306 Kelch-like protein 7; protein-binding, kelch-repea 100.0
2vpj_A301 Kelch-like protein 12; adaptor protein, WNT signal 100.0
1zgk_A308 Kelch-like ECH-associated protein 1; beta-propelle 100.0
2xn4_A302 Kelch-like protein 2; structural protein, cytoskel 99.98
3ii7_A306 Kelch-like protein 7; protein-binding, kelch-repea 99.98
2woz_A318 Kelch repeat and BTB domain-containing protein 10; 99.98
2vpj_A301 Kelch-like protein 12; adaptor protein, WNT signal 99.97
4asc_A315 Kelch repeat and BTB domain-containing protein 5; 99.97
2uvk_A357 YJHT; unknown function, hypothetical protein, sial 99.97
4asc_A315 Kelch repeat and BTB domain-containing protein 5; 99.96
2woz_A318 Kelch repeat and BTB domain-containing protein 10; 99.96
1k3i_A656 Galactose oxidase precursor; blade beta propeller, 99.96
2uvk_A357 YJHT; unknown function, hypothetical protein, sial 99.95
2zwa_A695 Leucine carboxyl methyltransferase 2; HET: SAH CIT 99.93
2zwa_A695 Leucine carboxyl methyltransferase 2; HET: SAH CIT 99.91
4ery_A312 WD repeat-containing protein 5; WD40, WIN motif, b 97.82
3no2_A276 Uncharacterized protein; six-bladed beta-propeller 97.74
3dsm_A328 Uncharacterized protein bacuni_02894; seven_blated 97.64
3ow8_A321 WD repeat-containing protein 61; structural genomi 97.64
1k8k_C372 P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta- 97.53
3no2_A276 Uncharacterized protein; six-bladed beta-propeller 97.51
1gxr_A337 ESG1, transducin-like enhancer protein 1; transcri 97.48
1got_B340 GT-beta; complex (GTP-binding/transducer), G prote 97.48
3vgz_A353 Uncharacterized protein YNCE; beta-propeller, prot 97.46
3zwl_B369 Eukaryotic translation initiation factor 3 subuni; 97.46
1gxr_A337 ESG1, transducin-like enhancer protein 1; transcri 97.36
2pbi_B354 Guanine nucleotide-binding protein subunit beta 5; 97.35
3bws_A433 Protein LP49; two-domain, immunoglobulin-like, 7-b 97.33
3hfq_A347 Uncharacterized protein LP_2219; Q88V64_lacpl, NES 97.26
1vyh_C410 Platelet-activating factor acetylhydrolase IB alph 97.26
3vl1_A420 26S proteasome regulatory subunit RPN14; beta-prop 97.14
2ynn_A304 Coatomer subunit beta'; protein transport, peptide 97.13
1l0q_A391 Surface layer protein; SLP, S-layer, 7-bladed beta 97.08
3vl1_A420 26S proteasome regulatory subunit RPN14; beta-prop 97.08
2pbi_B354 Guanine nucleotide-binding protein subunit beta 5; 97.03
2z2n_A299 Virginiamycin B lyase; seven-bladed beta-propeller 97.03
1got_B340 GT-beta; complex (GTP-binding/transducer), G prote 97.01
4ery_A312 WD repeat-containing protein 5; WD40, WIN motif, b 96.96
3u4y_A331 Uncharacterized protein; structural genomics, PSI- 96.95
1erj_A393 Transcriptional repressor TUP1; beta-propeller, tr 96.94
4aez_A401 CDC20, WD repeat-containing protein SLP1; cell cyc 96.91
3iz6_a380 40S ribosomal protein RACK1 (RACK1); eukaryotic ri 96.87
3dwl_C377 Actin-related protein 2/3 complex subunit 1; prope 96.87
4e54_B435 DNA damage-binding protein 2; beta barrel, double 96.83
3ei3_B383 DNA damage-binding protein 2; UV-damage, DDB, nucl 96.82
3v9f_A781 Two-component system sensor histidine kinase/RESP 96.79
3dsm_A328 Uncharacterized protein bacuni_02894; seven_blated 96.77
3iz6_a380 40S ribosomal protein RACK1 (RACK1); eukaryotic ri 96.74
3ow8_A321 WD repeat-containing protein 61; structural genomi 96.72
1rwi_B270 Serine/threonine-protein kinase PKND; beta propell 96.71
1l0q_A391 Surface layer protein; SLP, S-layer, 7-bladed beta 96.69
2aq5_A402 Coronin-1A; WD40 repeat, 7-bladed beta-propeller, 96.67
3jrp_A379 Fusion protein of protein transport protein SEC13 96.65
3scy_A361 Hypothetical bacterial 6-phosphogluconolactonase; 96.64
2qc5_A300 Streptogramin B lactonase; beta propeller, lyase; 96.64
2ynn_A304 Coatomer subunit beta'; protein transport, peptide 96.63
2pm9_A416 Protein WEB1, protein transport protein SEC31; bet 96.56
3sfz_A 1249 APAF-1, apoptotic peptidase activating factor 1; a 96.56
1r5m_A425 SIR4-interacting protein SIF2; transcription corep 96.56
1ri6_A343 Putative isomerase YBHE; 7-bladed propeller, enzym 96.55
3dwl_C377 Actin-related protein 2/3 complex subunit 1; prope 96.55
1r5m_A425 SIR4-interacting protein SIF2; transcription corep 96.53
3hfq_A347 Uncharacterized protein LP_2219; Q88V64_lacpl, NES 96.5
3jrp_A379 Fusion protein of protein transport protein SEC13 96.49
1q7f_A286 NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL 96.48
2ymu_A577 WD-40 repeat protein; unknown function, two domain 96.43
3mkq_A 814 Coatomer beta'-subunit; beta-propeller, alpha-sole 96.35
3jro_A 753 Fusion protein of protein transport protein SEC13 96.34
3u4y_A331 Uncharacterized protein; structural genomics, PSI- 96.34
1ri6_A343 Putative isomerase YBHE; 7-bladed propeller, enzym 96.34
3vgz_A353 Uncharacterized protein YNCE; beta-propeller, prot 96.34
1nr0_A611 Actin interacting protein 1; beta propeller, WD40 96.32
3sfz_A1249 APAF-1, apoptotic peptidase activating factor 1; a 96.32
2ovr_B445 FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 96.31
1k8k_C372 P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta- 96.29
3i2n_A357 WD repeat-containing protein 92; WD40 repeats, str 96.27
1pgu_A 615 Actin interacting protein 1; WD repeat, seven-blad 96.26
2ymu_A577 WD-40 repeat protein; unknown function, two domain 96.26
3odt_A313 Protein DOA1; ubiquitin, nuclear protein; HET: MSE 96.22
3fm0_A345 Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD r 96.2
3q7m_A376 Lipoprotein YFGL, BAMB; beta-propeller, BAM comple 96.09
2hes_X330 YDR267CP; beta-propeller, WD40 repeat, biosyntheti 96.07
1rwi_B270 Serine/threonine-protein kinase PKND; beta propell 96.03
3scy_A361 Hypothetical bacterial 6-phosphogluconolactonase; 96.0
2pm7_B297 Protein transport protein SEC13, protein transport 95.96
2pm7_B297 Protein transport protein SEC13, protein transport 95.9
4g56_B357 MGC81050 protein; protein arginine methyltransfera 95.9
3mmy_A368 MRNA export factor; mRNA export, nuclear protein; 95.86
2xbg_A327 YCF48-like protein; photosynthesis, photosystem II 95.85
1vyh_C410 Platelet-activating factor acetylhydrolase IB alph 95.84
4gga_A420 P55CDC, cell division cycle protein 20 homolog; ce 95.82
3lrv_A343 PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiqu 95.81
3fm0_A345 Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD r 95.71
4d9s_A406 UVB-resistance protein UVR8; UV resistance, UV-B p 95.71
1nr0_A 611 Actin interacting protein 1; beta propeller, WD40 95.61
1yfq_A342 Cell cycle arrest protein BUB3; WD repeat WD40 rep 95.57
3dm0_A694 Maltose-binding periplasmic protein fused with RAC 95.57
3v7d_B464 Cell division control protein 4; WD 40 domain, pho 95.57
3bws_A433 Protein LP49; two-domain, immunoglobulin-like, 7-b 95.55
1p22_A435 F-BOX/WD-repeat protein 1A; ubiquitination, degrad 95.47
1jmx_B349 Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 95.44
3fvz_A329 Peptidyl-glycine alpha-amidating monooxygenase; be 95.43
3v7d_B464 Cell division control protein 4; WD 40 domain, pho 95.4
4aez_A401 CDC20, WD repeat-containing protein SLP1; cell cyc 95.36
3jro_A 753 Fusion protein of protein transport protein SEC13 95.31
4a11_B408 DNA excision repair protein ERCC-8; DNA binding pr 95.31
3bg1_A316 Protein SEC13 homolog; NPC, transport, WD repeat, 95.28
3k26_A366 Polycomb protein EED; WD40, structural genomics, N 95.16
4a2l_A795 BT_4663, two-component system sensor histidine kin 95.16
4gqb_B344 Methylosome protein 50; TIM barrel, beta-propeller 95.13
1sq9_A397 Antiviral protein SKI8; WD repeat, beta-transducin 95.12
1nir_A543 Nitrite reductase; hemoprotein, denitrification, d 95.11
2pm9_A416 Protein WEB1, protein transport protein SEC31; bet 95.09
1erj_A393 Transcriptional repressor TUP1; beta-propeller, tr 95.06
4h5i_A365 Guanine nucleotide-exchange factor SEC12; copii ve 95.05
3zwl_B369 Eukaryotic translation initiation factor 3 subuni; 94.99
4g56_B357 MGC81050 protein; protein arginine methyltransfera 94.94
2ovr_B445 FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 94.94
4ggc_A318 P55CDC, cell division cycle protein 20 homolog; ce 94.85
3i2n_A357 WD repeat-containing protein 92; WD40 repeats, str 94.83
3mkq_A 814 Coatomer beta'-subunit; beta-propeller, alpha-sole 94.82
1nir_A543 Nitrite reductase; hemoprotein, denitrification, d 94.77
2aq5_A402 Coronin-1A; WD40 repeat, 7-bladed beta-propeller, 94.64
3frx_A319 Guanine nucleotide-binding protein subunit beta- l 94.64
4e54_B435 DNA damage-binding protein 2; beta barrel, double 94.6
2z2n_A299 Virginiamycin B lyase; seven-bladed beta-propeller 94.57
1sq9_A397 Antiviral protein SKI8; WD repeat, beta-transducin 94.48
2dg1_A333 DRP35, lactonase; beta propeller, hydrolase; 1.72A 94.32
1q7f_A286 NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL 94.22
3fvz_A329 Peptidyl-glycine alpha-amidating monooxygenase; be 94.18
2iwa_A266 Glutamine cyclotransferase; pyroglutamate, acyltra 93.97
1pgu_A 615 Actin interacting protein 1; WD repeat, seven-blad 93.96
3nol_A262 Glutamine cyclotransferase; beta-propeller, glutam 93.88
3odt_A313 Protein DOA1; ubiquitin, nuclear protein; HET: MSE 93.88
3q7m_A376 Lipoprotein YFGL, BAMB; beta-propeller, BAM comple 93.73
2ojh_A297 Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 93.71
3frx_A319 Guanine nucleotide-binding protein subunit beta- l 93.66
3k26_A366 Polycomb protein EED; WD40, structural genomics, N 93.63
3ei3_B383 DNA damage-binding protein 2; UV-damage, DDB, nucl 93.5
3bg1_A316 Protein SEC13 homolog; NPC, transport, WD repeat, 93.09
2vdu_B450 TRNA (guanine-N(7)-)-methyltransferase- associated 93.07
4aow_A340 Guanine nucleotide-binding protein subunit beta-2; 92.92
3dm0_A694 Maltose-binding periplasmic protein fused with RAC 92.92
3mbr_X243 Glutamine cyclotransferase; beta-propeller; 1.44A 92.43
3gre_A437 Serine/threonine-protein kinase VPS15; seven-blade 92.29
1p22_A435 F-BOX/WD-repeat protein 1A; ubiquitination, degrad 92.26
1pby_B337 Quinohemoprotein amine dehydrogenase 40 kDa subuni 91.68
4aow_A340 Guanine nucleotide-binding protein subunit beta-2; 91.33
2hqs_A415 Protein TOLB; TOLB, PAL, TOL, transport protein-li 91.24
2xzm_R343 RACK1; ribosome, translation; 3.93A {Tetrahymena t 91.2
4gga_A420 P55CDC, cell division cycle protein 20 homolog; ce 91.16
3mmy_A368 MRNA export factor; mRNA export, nuclear protein; 90.96
1yfq_A342 Cell cycle arrest protein BUB3; WD repeat WD40 rep 90.95
3f3f_A351 Nucleoporin SEH1; structural protein, protein comp 90.88
2ecf_A 741 Dipeptidyl peptidase IV; prolyl oligopeptidase fam 90.86
3mbr_X243 Glutamine cyclotransferase; beta-propeller; 1.44A 90.71
1pjx_A314 Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotries 90.36
3hrp_A409 Uncharacterized protein; NP_812590.1, structural g 90.16
1jmx_B349 Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 89.97
3nok_A268 Glutaminyl cyclase; beta-propeller, cyclotransfera 89.81
3e5z_A296 Putative gluconolactonase; X-RAY NESG Q9RXN3 gluco 89.05
2iwa_A266 Glutamine cyclotransferase; pyroglutamate, acyltra 89.04
3lrv_A343 PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiqu 88.48
2dg1_A333 DRP35, lactonase; beta propeller, hydrolase; 1.72A 88.44
2qc5_A300 Streptogramin B lactonase; beta propeller, lyase; 88.33
1w8o_A 601 Bacterial sialidase; 3D-structure, glycosidase, hy 88.17
2ecf_A 741 Dipeptidyl peptidase IV; prolyl oligopeptidase fam 88.04
4h5i_A365 Guanine nucleotide-exchange factor SEC12; copii ve 87.82
4a11_B408 DNA excision repair protein ERCC-8; DNA binding pr 87.63
2xyi_A430 Probable histone-binding protein CAF1; transcripti 87.29
2hqs_A415 Protein TOLB; TOLB, PAL, TOL, transport protein-li 87.17
3a72_A355 EXO-arabinanase; arabinase, glycosyl hydrolase, hy 87.11
3o4h_A 582 Acylamino-acid-releasing enzyme; alpha/beta hydrol 87.1
1jof_A365 Carboxy-CIS,CIS-muconate cyclase; beta-propeller, 86.77
2bkl_A695 Prolyl endopeptidase; mechanistic study, celiac sp 86.52
4gqb_B344 Methylosome protein 50; TIM barrel, beta-propeller 85.97
2vdu_B450 TRNA (guanine-N(7)-)-methyltransferase- associated 85.48
1pby_B337 Quinohemoprotein amine dehydrogenase 40 kDa subuni 84.62
2p9w_A334 MAL S 1 allergenic protein; beta propeller; 1.35A 83.65
3nol_A262 Glutamine cyclotransferase; beta-propeller, glutam 83.08
2xbg_A327 YCF48-like protein; photosynthesis, photosystem II 82.17
3mvd_K423 Regulator of chromosome condensation; protein-DNA 81.99
3vu4_A355 KMHSV2; beta-propeller fold, protein transport; 2. 81.29
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A Back     alignment and structure
Probab=100.00  E-value=4.6e-73  Score=632.07  Aligned_cols=433  Identities=21%  Similarity=0.330  Sum_probs=334.8

Q ss_pred             CeeeeeCC-CCEEEEEecccccccCcCCCCCCCCccccCCCCCCCccceeEEEEECCCCcEEECccC---CCcccCCCee
Q 042303            1 MHAILLPK-VNQVLMYDATVWKISKIPLPQEKMPCRVIDPKTNEVDCWAHSVLFDIETAKLKPLKIQ---TDTWCSSGGL   76 (519)
Q Consensus         1 ~h~~ll~~-~g~vl~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~yDp~t~~w~~l~~~---~~~~c~~~~~   76 (519)
                      .|++++ + +||||++||....  ..    |+           .........+|||.+++|+.+..+   ...+|+++++
T Consensus       189 ~~~av~-~~~g~l~v~GG~~~~--~~----~~-----------~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~  250 (656)
T 1k3i_A          189 AAAAIE-PTSGRVLMWSSYRND--AF----GG-----------SPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISM  250 (656)
T ss_dssp             SEEEEE-TTTTEEEEEEECCCT--TT----CS-----------CCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEE
T ss_pred             eeEEEE-ecCCEEEEEeccccc--cc----cc-----------CCCCeEEEEEEeCCCCcEEeCcccCCCCCCccccccC
Confidence            378888 7 9999999996521  11    10           001234678999999999988765   4668888888


Q ss_pred             ccCCeEEEecCCCCCCceEEEEeCCCCCccccCCCCCCCccccceEEEcCCCcEEEEcCC-CC----CceEEe-CCCCCC
Q 042303           77 TVDGHLVGTGGYQGGANTVRYLWTCDTCDWIEYPTALAEPRWYSTQVTLPDGGFIVVGGR-GA----FSYEYI-PPQGQS  150 (519)
Q Consensus        77 l~dG~llv~GG~~~g~~~v~~ydp~~~~~W~~~~~~m~~~R~y~s~~~L~dG~V~viGG~-~~----~~~E~y-P~~~~w  150 (519)
                      +.||+||++||...  .++++|||. +++|+++++ |+.+||+|++++++||+|||+||. +.    .++|+| |.+++|
T Consensus       251 ~~~g~lyv~GG~~~--~~v~~yd~~-t~~W~~~~~-~~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W  326 (656)
T 1k3i_A          251 DGNGQIVVTGGNDA--KKTSLYDSS-SDSWIPGPD-MQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTW  326 (656)
T ss_dssp             CTTSCEEEECSSST--TCEEEEEGG-GTEEEECCC-CSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTEE
T ss_pred             CCCCCEEEeCCCCC--CceEEecCc-CCceeECCC-CCccccccceEEecCCeEEEEeCcccCCcccccceEeCCCCCcc
Confidence            99999999999763  379999999 899999985 999999999999999999999995 32    578999 999988


Q ss_pred             CCcc--cccccchhccccccCCcccccccccccCccceEEEeeCCcEEEEeCC-----------ceEEeeCCCCeEEEEc
Q 042303          151 NKQS--IYLPLLRETHDQLAGHFGTENFYRIENNLYPFVNLVTDGNLFIFSNN-----------RSILFDPKANRVIREY  217 (519)
Q Consensus       151 ~~~~--~~~p~l~~t~~~~~g~~~~~~~~~~~~~~yp~~~~~~~G~Ifv~Gg~-----------~~~~yDp~t~~w~~~~  217 (519)
                      ....  ...|++.....                     +.+..+++||++||.           ..++||+.+++|+..+
T Consensus       327 ~~~~~~~~~p~~~~~~~---------------------~~~~~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~  385 (656)
T 1k3i_A          327 TSLPNAKVNPMLTADKQ---------------------GLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSA  385 (656)
T ss_dssp             EEETTSCSGGGCCCCTT---------------------GGGTTTCSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEE
T ss_pred             eeCCCcccccccccccc---------------------ceeecCCceEEEECCCCcEEEecCccceeeeecCCcceeecC
Confidence            5210  01233321100                     112245566666542           3689999999998544


Q ss_pred             cCCCCCC--CccCCCCcEEecccccccCCccccCCeEEEEcCCCCCcccccccccccccCCCce---EEEEecCCCCceE
Q 042303          218 PVLTGGS--RNYPASGMSVLLPIKLHAGHQKIIHSDILVCGGAAWDAFYYAEDKKQFWPALQDC---GRIRITEPNPVWK  292 (519)
Q Consensus       218 p~~p~~~--r~~~~~g~av~l~l~~~~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~---~~~d~~~~~~~W~  292 (519)
                      ...+...  ...+.+++++|++.         .+++||++||.+....         ..+++.|   ++||+.  +++|+
T Consensus       386 ~~~~~~~~~~~~~~~~~av~~~~---------~~~~i~v~GG~~~~~~---------~~~~~~~~~v~~yd~~--~~~W~  445 (656)
T 1k3i_A          386 GKRQSNRGVAPDAMCGNAVMYDA---------VKGKILTFGGSPDYQD---------SDATTNAHIITLGEPG--TSPNT  445 (656)
T ss_dssp             EECEETTEECCCCBTCEEEEEET---------TTTEEEEECCBSSSSS---------SBCCCCEEEEECCSTT--SCCEE
T ss_pred             CccccccccCCCCCCCceEeccC---------CCCeEEEEeCCCCCCC---------CCcCCcceEEEcCCCC--CCCee
Confidence            3222100  01244678888763         3899999999752110         1345544   445554  67898


Q ss_pred             ec---cCCcceeeceeEEecCCcEEEEcCcCCCCCCccCCCCCccccEEEeCCCCCcceeeecCCCCcCCccceeeeEcC
Q 042303          293 KE---MMPTRRVMGDMTILPTGDVLLVNGAQNGTSAWNDAEEPALAPALYKTKEKRHHRFQELAPTTIPRMYHSVSVLLP  369 (519)
Q Consensus       293 ~~---~M~~~R~~~~~vvLpdG~V~viGG~~~g~~g~~~~~~~~~~~e~YdP~t~~g~~W~~~~~~~~~R~yhs~a~Llp  369 (519)
                      ..   +|+.+|.+|++++++||+|||+||...+. ++. +..++.++|+|||+++   +|+.+++|+++|.|||+++||+
T Consensus       446 ~~~~~~mp~~R~~~~~~~l~~g~i~v~GG~~~~~-~~~-~~~~~~~v~~ydp~t~---~W~~~~~~~~~R~~hs~a~ll~  520 (656)
T 1k3i_A          446 VFASNGLYFARTFHTSVVLPDGSTFITGGQRRGI-PFE-DSTPVFTPEIYVPEQD---TFYKQNPNSIVRVYHSISLLLP  520 (656)
T ss_dssp             EECTTCCSSCCBSCEEEECTTSCEEEECCBSBCC-TTC-CCSBCCCCEEEEGGGT---EEEECCCCSSCCCTTEEEEECT
T ss_pred             EEccCCCCCCcccCCeEECCCCCEEEECCcccCc-CcC-CCCcccceEEEcCCCC---ceeecCCCCCccccccHhhcCC
Confidence            64   89999999999999999999999986442 222 3456778999999999   9999999999999999999999


Q ss_pred             CCcEEEecCCCCCCCccCCCCCceeeEEEEcCCCCCC--ccCCCCCceecCCCCCccccCceEEEEEEeccccccceEEE
Q 042303          370 DGKVLIAGSNTHDGYKFDHKYPTELRVEKFSPPYLDP--ALAHLRPEIVLDKSDCMVGYGQRISIQVKTTEGIKQSDIRI  447 (519)
Q Consensus       370 dG~V~v~GG~~~~~~~~~~~~p~~~~vEiy~Ppyl~~--~~~~~RP~i~~~~~p~~~~~g~~~~v~~~~~~~~~~~~~~v  447 (519)
                      ||+|||+||+.++.+.     ++++++|+|+||||+.  +..+.||+|++.. |+++.||++|+|+++.      .+.+|
T Consensus       521 dg~v~v~GG~~~~~~~-----~~~~~~e~~~Ppyl~~~~~~~~~rP~i~~~~-~~~~~~g~~~~~~~~~------~~~~~  588 (656)
T 1k3i_A          521 DGRVFNGGGGLCGDCT-----TNHFDAQIFTPNYLYNSNGNLATRPKITRTS-TQSVKVGGRITISTDS------SISKA  588 (656)
T ss_dssp             TSCEEEEECCCCTTCS-----CCCCEEEEEECGGGBCTTSSBCCCCCEEEES-CSEEETTCEEEEEESS------CCSEE
T ss_pred             CcEEEecCCCCCCCCC-----CCeeEEEEEeChhhccCCCCcCCCCcccccC-CceecCCCEEEEEEec------cceEE
Confidence            9999999999876542     3578999999999975  3456799999843 8999999999999873      36789


Q ss_pred             EEEeCCcccccCCCCCceEEeeeeeeeecCCCCcEEEEEEcCCCCCcCCCcceEEEEEc-CCcCCccEEEEeC
Q 042303          448 TMYAPAFTTHGTSMNQRLVILGLVEVRNDVAPGQHKIVAEAPPSGVITPPGYYLLYVVY-KGVPSPGMWFQIK  519 (519)
Q Consensus       448 ~l~~~~~~THs~n~~QR~v~L~~~~~~~~~~~g~~~~~v~~P~~~~~~ppG~ymlf~~~-~gvPS~a~~v~i~  519 (519)
                      +|||++|+||++||+||+|+|+++..      |..+++|++|+|++|||||||||||++ +||||+|+||+|+
T Consensus       589 ~l~~~~~~th~~~~~qr~~~l~~~~~------~~~~~~~~~p~~~~~~ppg~y~lf~~~~~g~ps~~~~v~~~  655 (656)
T 1k3i_A          589 SLIRYGTATHTVNTDQRRIPLTLTNN------GGNSYSFQVPSDSGVALPGYWMLFVMNSAGVPSVASTIRVT  655 (656)
T ss_dssp             EEEECCEEETTBCSSCCEEECCEEEE------ETTEEEEECCSCTTTSCSEEEEEEEECTTSCBCCCEEEEEE
T ss_pred             EEEecCccccCcCCCCcEEecceEec------CCCEEEEECCCCCCcCCCcCeEEEEECCCCcccccEEEEEe
Confidence            99999999999999999999999863      235789999999999999999999996 9999999999985
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens} Back     alignment and structure
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A Back     alignment and structure
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens} Back     alignment and structure
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens} Back     alignment and structure
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A Back     alignment and structure
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens} Back     alignment and structure
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens} Back     alignment and structure
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus} Back     alignment and structure
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens} Back     alignment and structure
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens} Back     alignment and structure
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli} Back     alignment and structure
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens} Back     alignment and structure
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus} Back     alignment and structure
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A Back     alignment and structure
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli} Back     alignment and structure
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A* Back     alignment and structure
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A* Back     alignment and structure
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ... Back     alignment and structure
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae} Back     alignment and structure
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis} Back     alignment and structure
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens} Back     alignment and structure
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C Back     alignment and structure
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae} Back     alignment and structure
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A Back     alignment and structure
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B* Back     alignment and structure
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A* Back     alignment and structure
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae} Back     alignment and structure
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A Back     alignment and structure
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus} Back     alignment and structure
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans} Back     alignment and structure
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum} Back     alignment and structure
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1 Back     alignment and structure
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A Back     alignment and structure
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A Back     alignment and structure
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3 Back     alignment and structure
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A Back     alignment and structure
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus} Back     alignment and structure
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A* Back     alignment and structure
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B* Back     alignment and structure
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ... Back     alignment and structure
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans} Back     alignment and structure
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 Back     alignment and structure
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe} Back     alignment and structure
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum} Back     alignment and structure
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe} Back     alignment and structure
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B* Back     alignment and structure
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B* Back     alignment and structure
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron} Back     alignment and structure
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis} Back     alignment and structure
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum} Back     alignment and structure
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens} Back     alignment and structure
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A Back     alignment and structure
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3 Back     alignment and structure
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A Back     alignment and structure
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae} Back     alignment and structure
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A Back     alignment and structure
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii} Back     alignment and structure
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A Back     alignment and structure
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae} Back     alignment and structure
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A* Back     alignment and structure
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae} Back     alignment and structure
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1 Back     alignment and structure
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe} Back     alignment and structure
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae} Back     alignment and structure
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum} Back     alignment and structure
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae} Back     alignment and structure
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1 Back     alignment and structure
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme} Back     alignment and structure
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A Back     alignment and structure
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae} Back     alignment and structure
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans} Back     alignment and structure
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1 Back     alignment and structure
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A* Back     alignment and structure
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A Back     alignment and structure
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A* Back     alignment and structure
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B* Back     alignment and structure
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C Back     alignment and structure
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens} Back     alignment and structure
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A Back     alignment and structure
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme} Back     alignment and structure
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae} Back     alignment and structure
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens} Back     alignment and structure
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A Back     alignment and structure
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae} Back     alignment and structure
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A Back     alignment and structure
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A Back     alignment and structure
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A Back     alignment and structure
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A Back     alignment and structure
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis} Back     alignment and structure
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens} Back     alignment and structure
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus} Back     alignment and structure
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1 Back     alignment and structure
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A Back     alignment and structure
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae} Back     alignment and structure
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens} Back     alignment and structure
>4d9s_A UVB-resistance protein UVR8; UV resistance, UV-B photoreceptor, tryptophan chromophores, homodimer, COP1, chromatin-binding protein; 1.70A {Arabidopsis thaliana} PDB: 4dnw_A 4dnu_A 4dnv_A Back     alignment and structure
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A Back     alignment and structure
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A Back     alignment and structure
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli} Back     alignment and structure
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B* Back     alignment and structure
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans} Back     alignment and structure
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 Back     alignment and structure
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B* Back     alignment and structure
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A* Back     alignment and structure
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B* Back     alignment and structure
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe} Back     alignment and structure
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae} Back     alignment and structure
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens} Back     alignment and structure
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A Back     alignment and structure
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A Back     alignment and structure
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A* Back     alignment and structure
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} Back     alignment and structure
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X Back     alignment and structure
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A* Back     alignment and structure
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae} Back     alignment and structure
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 Back     alignment and structure
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A Back     alignment and structure
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae} Back     alignment and structure
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis} Back     alignment and structure
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B* Back     alignment and structure
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens} Back     alignment and structure
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens} Back     alignment and structure
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A Back     alignment and structure
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A* Back     alignment and structure
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A Back     alignment and structure
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R* Back     alignment and structure
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B* Back     alignment and structure
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A* Back     alignment and structure
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X Back     alignment and structure
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A Back     alignment and structure
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1 Back     alignment and structure
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A* Back     alignment and structure
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A* Back     alignment and structure
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A Back     alignment and structure
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A Back     alignment and structure
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae} Back     alignment and structure
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A Back     alignment and structure
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str} Back     alignment and structure
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R* Back     alignment and structure
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A Back     alignment and structure
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B* Back     alignment and structure
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A Back     alignment and structure
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae} Back     alignment and structure
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a Back     alignment and structure
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli} Back     alignment and structure
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris} Back     alignment and structure
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae} Back     alignment and structure
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 Back     alignment and structure
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B* Back     alignment and structure
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a Back     alignment and structure
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A Back     alignment and structure
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R Back     alignment and structure
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A Back     alignment and structure
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens} Back     alignment and structure
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A Back     alignment and structure
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A Back     alignment and structure
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia} Back     alignment and structure
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris} Back     alignment and structure
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ... Back     alignment and structure
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482} Back     alignment and structure
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B* Back     alignment and structure
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus} Back     alignment and structure
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans} Back     alignment and structure
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A* Back     alignment and structure
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae} Back     alignment and structure
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A Back     alignment and structure
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii} Back     alignment and structure
>1w8o_A Bacterial sialidase; 3D-structure, glycosidase, hydrolase, beta- propeller; HET: LBT CIT; 1.70A {Micromonospora viridifaciens} SCOP: b.1.18.2 b.18.1.1 b.68.1.1 PDB: 1w8n_A* 1eut_A 1euu_A* 1wcq_A* 2bzd_A* 2ber_A* 1eur_A 1eus_A* Back     alignment and structure
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia} Back     alignment and structure
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A Back     alignment and structure
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens} Back     alignment and structure
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B Back     alignment and structure
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A Back     alignment and structure
>3a72_A EXO-arabinanase; arabinase, glycosyl hydrolase, hydrolase; HET: AHR; 1.04A {Penicillium chrysogenum} PDB: 3a71_A* Back     alignment and structure
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A Back     alignment and structure
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1 Back     alignment and structure
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus} Back     alignment and structure
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} Back     alignment and structure
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae} Back     alignment and structure
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B* Back     alignment and structure
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis} Back     alignment and structure
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A Back     alignment and structure
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus} Back     alignment and structure
>3mvd_K Regulator of chromosome condensation; protein-DNA complex, nucleosome core particle (NCP), NCP-CHR factor complex; HET: DNA; 2.90A {Drosophila melanogaster} Back     alignment and structure
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 519
d1k3ia3387 b.69.1.1 (A:151-537) Galactose oxidase, central do 1e-27
d1k3ia1102 b.1.18.2 (A:538-639) Galactose oxidase, C-terminal 4e-20
>d1k3ia3 b.69.1.1 (A:151-537) Galactose oxidase, central domain {Fungi (Fusarium sp.) [TaxId: 29916]} Length = 387 Back     information, alignment and structure

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Galactose oxidase, central domain
family: Galactose oxidase, central domain
domain: Galactose oxidase, central domain
species: Fungi (Fusarium sp.) [TaxId: 29916]

 Score =  112 bits (279), Expect = 1e-27
 Identities = 60/376 (15%), Positives = 110/376 (29%), Gaps = 43/376 (11%)

Query: 38  DPKTNEVDCWAHSVLFDIET---AKLKPLKIQTDTWCSSGGLTVDGHLVGTGGYQGGANT 94
           D           +  +D  T   +       + D +C    +  +G +V TGG       
Sbjct: 42  DAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDA---- 97

Query: 95  VRYLWTCDTCDWIEYPTALAEPRWYSTQVTLPDGGFIVVGGRGAFSYEY---IPPQGQSN 151
            +     D+      P    +             G +   G       +         S+
Sbjct: 98  -KKTSLYDSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSS 156

Query: 152 KQSIYLPLLRETHDQLAGHFGTENFYRIENNLYPFVNLVTDGNLFIFSNNRSILFDPKAN 211
           K    LP  +      A   G        ++ + ++     G++F    + ++ +   + 
Sbjct: 157 KTWTSLPNAKVNPMLTADKQGL-----YRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSG 211

Query: 212 RVIREYPVLTGGSRNYPA---SGMSVLLPIKLHAGHQKIIHSDILVCGGAAWDAFYYAED 268
               +       +R        G +V+      A   KI+          +         
Sbjct: 212 SGDVKSAGKRQSNRGVAPDAMCGNAVMYD----AVKGKILTFGGSPDYQDSDATTNAHII 267

Query: 269 KKQFWPALQDCGRIRITEPNPVWKKEMMPTRRVMGDMTILPTGDVLLVNGAQNGTSAWND 328
                           T PN V+    +   R      +LP G   +  G + G    + 
Sbjct: 268 TLGEPG----------TSPNTVFASNGLYFARTFHTSVVLPDGSTFITGGQRRGIPFEDS 317

Query: 329 AEEPALAPALYKTKEKRHHRFQELAPTTIPRMYHSVSVLLPDGKVLIAGSNTHDGYKFDH 388
              P   P +Y  ++     F +  P +I R+YHS+S+LLPDG+V   G           
Sbjct: 318 --TPVFTPEIYVPEQDT---FYKQNPNSIVRVYHSISLLLPDGRVFNGGGGLCGDC---- 368

Query: 389 KYPTELRVEKFSPPYL 404
                   + F+P YL
Sbjct: 369 -TTNHFDAQIFTPNYL 383
>d1k3ia1 b.1.18.2 (A:538-639) Galactose oxidase, C-terminal domain {Fungi (Fusarium sp.) [TaxId: 29916]} Length = 102 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query519
d1k3ia3387 Galactose oxidase, central domain {Fungi (Fusarium 100.0
d1k3ia1102 Galactose oxidase, C-terminal domain {Fungi (Fusar 100.0
d1zgka1288 Kelch-like ECH-associated protein 1, KEAP1 {Human 99.98
d1zgka1288 Kelch-like ECH-associated protein 1, KEAP1 {Human 99.95
d1k3ia3387 Galactose oxidase, central domain {Fungi (Fusarium 99.95
d1nr0a2299 Actin interacting protein 1 {Nematode (Caenorhabdi 97.66
d1nr0a1311 Actin interacting protein 1 {Nematode (Caenorhabdi 97.46
d1l0qa2301 Surface layer protein {Archaeon Methanosarcina maz 96.83
d1nr0a2299 Actin interacting protein 1 {Nematode (Caenorhabdi 96.8
d1jmxb_346 Quinohemoprotein amine dehydrogenase B chain {Pseu 96.77
d1tbga_340 beta1-subunit of the signal-transducing G protein 96.72
d1gxra_337 Groucho/tle1, C-terminal domain {Human (Homo sapie 96.57
d1nr0a1311 Actin interacting protein 1 {Nematode (Caenorhabdi 96.57
d1k8kc_371 Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taur 96.17
d1vyhc1317 Platelet-activating factor acetylhydrolase IB subu 95.78
d1erja_388 Tup1, C-terminal domain {Baker's yeast (Saccharomy 95.72
d1gxra_337 Groucho/tle1, C-terminal domain {Human (Homo sapie 95.45
d1pbyb_337 Quinohemoprotein amine dehydrogenase B chain {Para 95.25
d1l0qa2301 Surface layer protein {Archaeon Methanosarcina maz 94.76
d2p4oa1302 Hypothetical protein All0351 homologue {Nostoc pun 94.63
d1pgua1325 Actin interacting protein 1 {Baker's yeast (Saccha 93.83
d1ri6a_333 Putative isomerase YbhE {Escherichia coli [TaxId: 93.42
d1rwia_260 Serine/threonine-protein kinase PknD {Mycobacteriu 93.25
d1k8kc_371 Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taur 92.43
d1erja_388 Tup1, C-terminal domain {Baker's yeast (Saccharomy 92.35
d1rwia_260 Serine/threonine-protein kinase PknD {Mycobacteriu 91.65
d1q7fa_279 Brain tumor cg10719-pa {Fruit fly (Drosophila mela 91.17
d1q7fa_279 Brain tumor cg10719-pa {Fruit fly (Drosophila mela 90.78
d2ovrb2342 F-box/WD repeat-containing protein 7, FBXW7 {Human 90.56
d1pjxa_314 Diisopropylfluorophosphatase (phosphotriesterase, 89.53
d1mdah_368 Methylamine dehydrogenase, H-chain {Paracoccus den 87.76
d1nexb2355 Cdc4 propeller domain {Baker's yeast (Saccharomyce 85.6
d2p4oa1302 Hypothetical protein All0351 homologue {Nostoc pun 85.37
d1k32a3360 Tricorn protease domain 2 {Archaeon Thermoplasma a 84.24
d2ovrb2342 F-box/WD repeat-containing protein 7, FBXW7 {Human 83.44
d1tbga_340 beta1-subunit of the signal-transducing G protein 83.33
d1jmxb_346 Quinohemoprotein amine dehydrogenase B chain {Pseu 82.79
d1vyhc1317 Platelet-activating factor acetylhydrolase IB subu 82.64
>d1k3ia3 b.69.1.1 (A:151-537) Galactose oxidase, central domain {Fungi (Fusarium sp.) [TaxId: 29916]} Back     information, alignment and structure
class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Galactose oxidase, central domain
family: Galactose oxidase, central domain
domain: Galactose oxidase, central domain
species: Fungi (Fusarium sp.) [TaxId: 29916]

Probab=100.00  E-value=1.5e-47  Score=393.03  Aligned_cols=347  Identities=21%  Similarity=0.332  Sum_probs=254.2

Q ss_pred             CeeeeeCCCCEEEEEecccccccCcCCCCCCCCccccCCCCCCCccceeEEEEECCCCcEEECccC---CCcccCCCeec
Q 042303            1 MHAILLPKVNQVLMYDATVWKISKIPLPQEKMPCRVIDPKTNEVDCWAHSVLFDIETAKLKPLKIQ---TDTWCSSGGLT   77 (519)
Q Consensus         1 ~h~~ll~~~g~vl~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~yDp~t~~w~~l~~~---~~~~c~~~~~l   77 (519)
                      .|++++..+||||+|||...  ....  +.             .......++|||++++|+.++.+   ...||++++++
T Consensus        22 ~~~a~~~~~gkv~v~GG~~~--~~~~--~~-------------~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~   84 (387)
T d1k3ia3          22 AAAAIEPTSGRVLMWSSYRN--DAFG--GS-------------PGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMD   84 (387)
T ss_dssp             SEEEEETTTTEEEEEEECCC--TTTC--SC-------------CCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEEC
T ss_pred             cEEEEEeeCCEEEEEEeecC--cccC--CC-------------CCceeEEEEEECCCCcEeecCCCCCCcccceeEEEEe
Confidence            36666648999999999552  2211  00             11345688999999999876543   56799999999


Q ss_pred             cCCeEEEecCCCCCCceEEEEeCCCCCccccCCCCCCCccccceEEEcCCCcEEEEcCCCC-----CceEEe-CCCCCCC
Q 042303           78 VDGHLVGTGGYQGGANTVRYLWTCDTCDWIEYPTALAEPRWYSTQVTLPDGGFIVVGGRGA-----FSYEYI-PPQGQSN  151 (519)
Q Consensus        78 ~dG~llv~GG~~~g~~~v~~ydp~~~~~W~~~~~~m~~~R~y~s~~~L~dG~V~viGG~~~-----~~~E~y-P~~~~w~  151 (519)
                      .||+|+++||..  .+++++|||. +++|++.+. |+.+||+|+++++.||+||++||...     .++|+| |.+++|.
T Consensus        85 ~~g~i~v~Gg~~--~~~~~~yd~~-~~~w~~~~~-~~~~r~~~~~~~~~dG~v~v~GG~~~~~~~~~~v~~yd~~~~~W~  160 (387)
T d1k3ia3          85 GNGQIVVTGGND--AKKTSLYDSS-SDSWIPGPD-MQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWT  160 (387)
T ss_dssp             TTSCEEEECSSS--TTCEEEEEGG-GTEEEECCC-CSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTEEE
T ss_pred             cCCcEEEeecCC--CcceeEecCc-cCccccccc-ccccccccceeeecCCceeeeccccccccccceeeeecCCCCcee
Confidence            999999999864  5688999999 999999985 99999999999999999999999753     468999 9999995


Q ss_pred             CcccccccchhccccccCCcccccccccccCccceEEEeeCCcEEEEeCCc--eEEeeCCCCeEEEEccCCCCCCC--cc
Q 042303          152 KQSIYLPLLRETHDQLAGHFGTENFYRIENNLYPFVNLVTDGNLFIFSNNR--SILFDPKANRVIREYPVLTGGSR--NY  227 (519)
Q Consensus       152 ~~~~~~p~l~~t~~~~~g~~~~~~~~~~~~~~yp~~~~~~~G~Ifv~Gg~~--~~~yDp~t~~w~~~~p~~p~~~r--~~  227 (519)
                      .    ++-+.........   ....+  ..+.|+.++...+|++|++|+..  .+.||+.++.|. ..+.++....  ..
T Consensus       161 ~----~~~~~~~~~~~~~---~~~~~--~~~~~~~~~~~~~G~~~~~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~  230 (387)
T d1k3ia3         161 S----LPNAKVNPMLTAD---KQGLY--RSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVK-SAGKRQSNRGVAPD  230 (387)
T ss_dssp             E----ETTSCSGGGCCCC---TTGGG--TTTCSCCEEECGGGCEEECCSSSEEEEEECSTTCEEE-EEEECEETTEECCC
T ss_pred             e----cCCCccccccccc---cccee--eccceeEEEEeCCCCEEEecCcCCcEEecCcccCcEe-eccccccCcccCcc
Confidence            2    2111000000000   00111  12346678888999999999875  567899999987 4655543211  12


Q ss_pred             CCCCcEEecccccccCCccccCCeEEEEcCCCCCcccccccccccccCCCceEEEEecCC---CCceEec-cCCcceeec
Q 042303          228 PASGMSVLLPIKLHAGHQKIIHSDILVCGGAAWDAFYYAEDKKQFWPALQDCGRIRITEP---NPVWKKE-MMPTRRVMG  303 (519)
Q Consensus       228 ~~~g~av~l~l~~~~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~~~d~~~~---~~~W~~~-~M~~~R~~~  303 (519)
                      +.++.+++++.         .++|||++||......         .......+.++....   ...|+.. +|+.+|.++
T Consensus       231 ~~~~~~~~~~~---------~~g~v~v~GG~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~  292 (387)
T d1k3ia3         231 AMCGNAVMYDA---------VKGKILTFGGSPDYQD---------SDATTNAHIITLGEPGTSPNTVFASNGLYFARTFH  292 (387)
T ss_dssp             CBTCEEEEEET---------TTTEEEEECCBSSSSS---------SBCCCCEEEEECCSTTSCCEEEECTTCCSSCCBSC
T ss_pred             cccccEEEeec---------cCCceEEEEeccCCCC---------CcccceeecccccccccCCCceeeccccccccccc
Confidence            23566777653         3899999999763221         112233444554432   2356666 999999999


Q ss_pred             eeEEecCCcEEEEcCcCCCCCCccCCCCCccccEEEeCCCCCcceeeecCCCCcCCccceeeeEcCCCcEEEecCCCCCC
Q 042303          304 DMTILPTGDVLLVNGAQNGTSAWNDAEEPALAPALYKTKEKRHHRFQELAPTTIPRMYHSVSVLLPDGKVLIAGSNTHDG  383 (519)
Q Consensus       304 ~~vvLpdG~V~viGG~~~g~~g~~~~~~~~~~~e~YdP~t~~g~~W~~~~~~~~~R~yhs~a~LlpdG~V~v~GG~~~~~  383 (519)
                      ++++++||+|||+||...+...  ....+++++|+|||+++   +|+.+++|+++|.+||+++|++||||||+||+.++.
T Consensus       293 ~~~~~~dg~i~v~GG~~~~~~~--~~~~~~~~ve~Ydp~~~---~W~~~~~~~~~R~~Hs~a~l~~dG~v~v~GG~~~~~  367 (387)
T d1k3ia3         293 TSVVLPDGSTFITGGQRRGIPF--EDSTPVFTPEIYVPEQD---TFYKQNPNSIVRVYHSISLLLPDGRVFNGGGGLCGD  367 (387)
T ss_dssp             EEEECTTSCEEEECCBSBCCTT--CCCSBCCCCEEEEGGGT---EEEECCCCSSCCCTTEEEEECTTSCEEEEECCCCTT
T ss_pred             eeeeccCCeEEEECCcccCccC--CCCcEeceEEEEECCCC---eEEECCCCCCcccceEEEEECCCCEEEEEeCCCcCC
Confidence            9999999999999998654321  23456778999999999   999999999999999999999999999999986654


Q ss_pred             CccCCCCCceeeEEEEcCCCCCC
Q 042303          384 YKFDHKYPTELRVEKFSPPYLDP  406 (519)
Q Consensus       384 ~~~~~~~p~~~~vEiy~Ppyl~~  406 (519)
                      .     ..++.++|+|+|||||.
T Consensus       368 ~-----~~~~~~~e~y~Ppyl~~  385 (387)
T d1k3ia3         368 C-----TTNHFDAQIFTPNYLYN  385 (387)
T ss_dssp             C-----SCCCCEEEEEECGGGBC
T ss_pred             C-----CcccceEEEEcchhccC
Confidence            3     23467999999999975
>d1k3ia1 b.1.18.2 (A:538-639) Galactose oxidase, C-terminal domain {Fungi (Fusarium sp.) [TaxId: 29916]} Back     information, alignment and structure
>d1zgka1 b.68.11.1 (A:322-609) Kelch-like ECH-associated protein 1, KEAP1 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1zgka1 b.68.11.1 (A:322-609) Kelch-like ECH-associated protein 1, KEAP1 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1k3ia3 b.69.1.1 (A:151-537) Galactose oxidase, central domain {Fungi (Fusarium sp.) [TaxId: 29916]} Back     information, alignment and structure
>d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Back     information, alignment and structure
>d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Back     information, alignment and structure
>d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon Methanosarcina mazei [TaxId: 2209]} Back     information, alignment and structure
>d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Back     information, alignment and structure
>d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]} Back     information, alignment and structure
>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Back     information, alignment and structure
>d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]} Back     information, alignment and structure
>d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon Methanosarcina mazei [TaxId: 2209]} Back     information, alignment and structure
>d2p4oa1 b.68.6.3 (A:4-305) Hypothetical protein All0351 homologue {Nostoc punctiforme [TaxId: 272131]} Back     information, alignment and structure
>d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1ri6a_ b.69.11.1 (A:) Putative isomerase YbhE {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1rwia_ b.68.9.1 (A:) Serine/threonine-protein kinase PknD {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1rwia_ b.68.9.1 (A:) Serine/threonine-protein kinase PknD {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d1q7fa_ b.68.9.1 (A:) Brain tumor cg10719-pa {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Back     information, alignment and structure
>d1q7fa_ b.68.9.1 (A:) Brain tumor cg10719-pa {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Back     information, alignment and structure
>d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1pjxa_ b.68.6.1 (A:) Diisopropylfluorophosphatase (phosphotriesterase, DFP) {Squid (Loligo vulgaris) [TaxId: 6622]} Back     information, alignment and structure
>d1mdah_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]} Back     information, alignment and structure
>d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d2p4oa1 b.68.6.3 (A:4-305) Hypothetical protein All0351 homologue {Nostoc punctiforme [TaxId: 272131]} Back     information, alignment and structure
>d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Back     information, alignment and structure
>d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]} Back     information, alignment and structure
>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure