Citrus Sinensis ID: 042390

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620------
Protein Sequence
MGRSNSCFKIITCGSDSAGNDDLDVSEFPTPVEPKTSETIIETDADDSPLDESVVIVIQAAVRGILAQRELLKLKNVVKLQAAVRGHLVRRHAVGTLRCVQAIVKMQTLVRARYARLGKEPDWKAEKDTCNSVTSKGNLVTKPNATRTSIQNLLSNRFARQLMESTPKNKPIHIKCDPAKQDSAWNWLERWMPVSSAKQTLEPGSKIEHSENGKNENFASPVETKIPSEVLCDSADSKSRIRETDVLSKIEENLITHDADKFNFQQSQPTSVGDDLELSEPENNGTSDVNEISIETDSHQSQIVQSDAPSQQELKSLSNKPEMESEPPKRSMKRFASEDLETEGKKFVFGSRKASNPAFVVAHSKFEELSSSANSGKSISSQHQDVSVDSNANNISSGANSLTRTKNLSIGENSVSRIQYGGSECGTELSISSTLDSPDRYEAGNTEHEHSAKVSENEICDPKSLNNPDVKASDASTIPTYDASHSIVGQPEKVDDVRNESVNSLVVIDAAAQQKPDNSAPDFHKEPDLQTGHQMYRSYRSSPEASPRSHITVPESQGTPSSQVSVKAKNNRSDKSGSYRKRKPLSASKGSPSNPSQNSGARSSTEQLPKRSEKRQETQFLWFIKN
Secondary Structure (PSIPRED)
cccccccEEEEEcccccccccccccccccccccccccccEEcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHcccccccc
Secondary Structure Prediction (SSPRO)
ccccccEEEEEcccccccccccccccccccccccccccEEccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHccccccccccccHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHccccccccccccccHccccccccccccccccccccccccccEHHHcccccccccccccccccccccccHHHHHHHHcccEEEEcc
Coil and Loop (DISEMBL)
mgrsnscfkiitcgsdsagnddldvsefptpvepktsetiietdaddspldeSVVIVIQAAVRGILAQRELLKLKNVVKLQAAVRGHLVRRHAVGTLRCVQAIVKMQTLVRARYARlgkepdwkaekdtcnsvtskgnlvtkpnatRTSIQNLLSNRFARQLMestpknkpihikcdpakqdsaWNWLerwmpvssakqtlepgskiehsengknenfaspvetkipsevlcdsadsksrirETDVLSKIEENLithdadkfnfqqsqptsvgddlelsepenngtsdvneisietdshqsqivqsdapsqqelkslsnkpemeseppkrsmkRFASEDletegkkfvfgsrkasnpafVVAHSKFEElsssansgksissqhqdvsvdsnannissgansltrtknlsigenSVSRIQyggsecgtelsisstldspdryeagntehehsakvseneicdpkslnnpdvkasdastiptydashsivgqpekvddvrnESVNSLVVIDAaaqqkpdnsapdfhkepdlqtghqmyrsyrsspeasprshitvpesqgtpssqvsvkaknnrsdksgsyrkrkplsaskgspsnpsqnsgarssteqlpkrseKRQETQFLWFIKN
Flexible Loop (DISEMBL)
mgrsnscfkiitcgsdsagnddLDVSEFPtpvepktsetiietdaddsplDESVVIVIQAAVRGILAQRELLKLKNVVKLQAavrghlvrrhavgtlrcVQAIVKMQTLVRARYArlgkepdwkaekdtcnsvtskgnlvtkpnatrTSIQNLLSNRFARQLMEStpknkpihikcdpAKQDSAWNWLERWMPVSSAKQtlepgskiehsengknenfaspvetkipsevlcdsadsksrirETDVLSKIEENLIthdadkfnfqqsQPTSVGDDLELSEPENNGTSDVNEISIETDSHQsqivqsdapsqqelkslsnkpemeseppkrsmkrfASEDLETEGKkfvfgsrkasnPAFVVAHSKFEELSSSANSGKSISSQHQDVSVDSnannissgansltrtknlsigENSVSRIQYGGSECGTELSISSTLDSPDRYEAGNTehehsakvseneicdpkslnnpDVKASDASTIPTYDASHSIVGQPEKVDDVRNESVNSLVVIDAAaqqkpdnsapdfhKEPDLQTGHQMYRSYRSSPEASPRShitvpesqgtpssqvsvkaknnrsdksgsyrkrkplsaskgspsnpsqnsgarssteqlpkrsekrqetqflwfikn
Low Complexity Region (SEG)
MGRSNSCFKIITCGSDSAGNDDLDVSEFPTPVEPKTSETIIETDADDSPLDESVVIVIQAAVRGILAQRELLKLKNVVKLQAAVRGHLVRRHAVGTLRCVQAIVKMQTLVRARYARLGKEPDWKAEKDTCNSVTSKGNLVTKPNATRTSIQNLLSNRFARQLMESTPKNKPIHIKCDPAKQDSAWNWLERWMPVSSAKQTLEPGSKIEHSENGKNENFASPVETKIPSEVLCDSADSKSRIRETDVLSKIEENLITHDADKFNFQQSQPTSVGDDLELSEPENNGTSDVNEISIETDSHQSQIVQSDAPSQQELKSLSNKPEMESEPPKRSMKRFASEDLETEGKKFVFGSRKASNPAFVVAHSKFEELsssansgksissQHQDVSVDsnannissgansLTRTKNLSIGENSVSRIQYGGSECGTELSISSTLDSPDRYEAGNTEHEHSAKVSENEICDPKSLNNPDVKASDASTIPTYDASHSIVGQPEKVDDVRNESVNSLVVIDAAAQQKPDNSAPDFHKEPDLQTGHQMYRSYRSSPEASPRSHITVPESQGTPSSQVSVKAKNNRSDKSGSYRKRKPLSASKGSPSNPSQNSGARSSTEQLPKRSEKRQETQFLWFIKN
Disordered region (IsUnstruct)
******CFKIITC**************************************ESVVIVIQAAVRGILAQRELLKLKNVVKLQAAVRGHLVRRHAVGTLRCVQAIVKMQTLVRARYARLGKEPDW**************************************************IKCD**KQDSAWNWLERWMP******************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************FLWFI**
Disordered Region (DISOPRED)
****************************************************SVVIVIQAAVRGILAQRELLKLKNVVKLQAAVRGHLVRRHAVGTLRCVQAIVKMQTLVRA*************************************************************************NWLERWMP*************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************
Disordered Region (DISEMBL)
MGRSNSCFKIITCGSDSAGNDDLDVSEFPTPVEPKTSETIIETDADDSPLDESVVIVIQAAVRGILAQRELLKLKNVVKLQAAVRGHLVRRHAVGTLRCVQAIVKMQTLVRARYARLGKEPDWKAEKDTCNSVTSKGNLVTKPNATRTSIQNLLSNRFARQLMESTPKNKPIHIKCDPAKQDSAWNWLERWMPVSSAKQTLEPGSKIEHSENGKNENFASPVETKIPSEVLCDSADSKSRIRETDVLSKIEENLITHDADKFNFQQSQPTSVGDDLELSEPENNGTSDVNEISIETD*******************************************ETEGKKFVFGSRKASNPAFVVAHSKFEE*******************VDSNANNISSGANSLTRTKNLSIGENSVSRIQYGGSECGTELSISSTLDSPDRYE*************ENEICDPKSLNNPDVKASDASTIPTYDASHSIVGQPEKVDDVRNESVNSLVVIDAAAQQKPDNSAPDFHKEPDLQTGHQM*********************************************************************************ETQFLWFIKN
Disordered Region (DISPRO)
**************************************TIIETDADDSPLDESVVIVIQAAVRGILAQRELLKLKNVVKLQAAVRGHLVRRHAVGTLRCVQAIVKMQTLVRARYARLG*E***********SVTSKG*LVTKPNATRTSIQNLLSNRFARQLMESTPKNKPIHIKCDPAKQDSAWNWLERWMPVSSA******************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************SEKRQETQFLWFIKN
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
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Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MGRSNSCFKIITCGSDSAGNDDLDVSEFPTPVEPKTSETIIETDADDSPLDESVVIVIQAAVRGILAQRELLKLKNVVKLQAAVRGHLVRRHAVGTLRCVQAIVKMQTLVRARYARLGKEPDWKAEKDTCNSVTSKGNLVTKPNATRTSIQNLLSNRFARQLMESTPKNKPIHIKCDPAKQDSAWNWLERWMPVSSAKQTLEPGSKIEHSENGKNENFASPVETKIPSEVLCDSADSKSRIRETDVLSKIEENLITHDADKFNFQQSQPTSVGDDLELSEPENNGTSDVNEISIETDSHQSQIVQSDAPSQQELKSLSNKPEMESEPPKRSMKRFASEDLETEGKKFVFGSRKASNPAFVVAHSKFEELSSSANSGKSISSQHQDVSVDSNANNISSGANSLTRTKNLSIGENSVSRIQYGGSECGTELSISSTLDSPDRYEAGNTEHEHSAKVSENEICDPKSLNNPDVKASDASTIPTYDASHSIVGQPEKVDDVRNESVNSLVVIDAAAQQKPDNSAPDFHKEPDLQTGHQMYRSYRSSPEASPRSHITVPESQGTPSSQVSVKAKNNRSDKSGSYRKRKPLSASKGSPSNPSQNSGARSSTEQLPKRSEKRQETQFLWFIKN
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	626	2.2.26 [Sep-21-2011]
Q9FXI5	794	Protein IQ-DOMAIN 32 OS=A	yes	no	0.790	0.623	0.383	7e-72
Q8L4D8	587	Protein IQ-DOMAIN 31 OS=A	no	no	0.220	0.235	0.379	2e-20
Q9SF32	454	Protein IQ-DOMAIN 1 OS=Ar	no	no	0.220	0.303	0.260	1e-08
Q8LPG9	668	Protein IQ-DOMAIN 14 OS=A	no	no	0.218	0.205	0.254	3e-07

>sp|Q9FXI5|IQD32_ARATH Protein IQ-DOMAIN 32 OS=Arabidopsis thaliana GN=IQD32 PE=1 SV=3

 Score =  272 bits (695), Expect = 7e-72,   Method: Compositional matrix adjust.
 Identities = 229/597 (38%), Positives = 317/597 (53%), Gaps = 102/597 (17%)

Query: 27  EFPTPVEPKTSET----IIETDAD---DSPLDESVVIVIQAAVRGILAQRELLKLKNVVK 79
           E  + VEP+ SE+    I+  ++D   D  LDESV++VIQAAVRG LA+RELL+ K V+K
Sbjct: 183 EMASKVEPEESESDDVIIVRKESDEKVDEKLDESVIVVIQAAVRGFLARRELLRSKKVIK 242

Query: 80  LQAAVRGHLVRRHAVGTLRCVQAIVKMQTLVRARYARLGKEPDWKAEKDTCNSVTSKGNL 139
           LQAAVRGHLVR  A+G+LRCVQAIVKMQ +VRAR++           KD   S  S  + 
Sbjct: 243 LQAAVRGHLVRSQAMGSLRCVQAIVKMQAMVRARHST----------KD--GSRVSATSD 290

Query: 140 VTKPNATRTSIQNLLSNRFARQLMESTPKNKPIHIKCDPAKQDSAWNWLERWMPVSSAKQ 199
            ++PNA   + Q LL N+FA+ LMESTPK KPI+IKCDP K  SAWNWLERWM V   ++
Sbjct: 291 KSEPNA---AAQKLLENKFAKHLMESTPKTKPINIKCDPTKPSSAWNWLERWMSVPKPEK 347

Query: 200 TLEPGSKIEHSENGKNENFASPVETKIPSEVLCDSADSKSRIRETDVLSKIEENLITHDA 259
           T +     E       +N       KI  +    ++DS        V +K E ++ +++A
Sbjct: 348 TSKANLTTEE------QNLEETQNVKISPQADFVNSDST-------VENKTETDMPSYEA 394

Query: 260 DKFNFQQSQPTSVGDDLELSEPENNGTSDVNEISIET--DSHQSQIVQSDAPSQQELKSL 317
            K           G ++ELSE E     D  E S E   DS QSQ      P   +  SL
Sbjct: 395 SKVE---------GQNVELSETEKMSQYDSPEASAEVYYDSIQSQ------PLAAKPDSL 439

Query: 318 SNKPEMESEPPKRSMKRFASEDLETEGKKFVFGSRKASNPAFVVAHSKFEELSSSANSGK 377
             +PE      K S+K                  RK SNP+F+ A SKFEEL+SS  S K
Sbjct: 440 LEEPEYVDGQIKHSLK------------------RKVSNPSFIAAQSKFEELTSSTGSNK 481

Query: 378 SIS-SQHQDVSVDSNANNISSGANSLTRTKNLSIGENSVSRIQYGGSECGTELSISSTLD 436
           +++ S   DV  +    +I S  ++    K+ S+    V+  +  GSECGTELS++S+LD
Sbjct: 482 AMTLSSKDDVLGEEGKTDIDS-PDTTNTIKDHSL--EDVTPAELSGSECGTELSVTSSLD 538

Query: 437 SPDRY-EAGNTEHEHSAKVSENEI--CDPKSLNNPDVKASDASTIPTYDASHSIVGQPEK 493
           + ++  +A   E    AK+ E++    D   L   DVK  DA+++ T +         EK
Sbjct: 539 TLEKKSDAEGAEPRVEAKLLEDDTFKTDQAELIEIDVK--DATSMGTVEDPK------EK 590

Query: 494 VDDVRNESVNSLVVIDAAAQQKPDNSAPDFHK-EPDLQTGHQMYRSYRSSPEASPRSHIT 552
           V++ ++E      V  +A   +P  S PD  K   + ++G Q Y    S    +P   +T
Sbjct: 591 VENAKDE------VEISATHHEPVISTPDSKKRRAEDESGPQAY--ALSEGALTP---MT 639

Query: 553 VPESQGTPSSQV--SVKAKNNRSDKSGSYRKRKPLSASKGSPSNPSQNSGARSSTEQ 607
           + ESQ TP+SQ   SVKA+  +S+KSGS +KRK    SK   S+P Q  G   +TEQ
Sbjct: 640 ITESQATPASQASSSVKARKGKSEKSGSSQKRK---VSKKITSSPKQEIGTGEATEQ 693

Arabidopsis thaliana (taxid: 3702)

>sp|Q8L4D8|IQD31_ARATH Protein IQ-DOMAIN 31 OS=Arabidopsis thaliana GN=IQD31 PE=1 SV=1

 Score =  100 bits (250), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 58/153 (37%), Positives = 81/153 (52%), Gaps = 15/153 (9%)

Query: 58  IQAAVRGILAQRELLKLKNVVKLQAAVRGHLVRRHAVGTLRCVQAIVKMQTLVRARYAR- 116
           +QAA RG LA+R    LK +++LQA +RGHLVRR AV TL  V  IV++Q   R R  R 
Sbjct: 119 VQAAFRGYLARRAFWALKGIIRLQALIRGHLVRRQAVATLFSVMGIVRLQAFARGREIRK 178

Query: 117 --LGKEPDWKAEKDTCNSVTSKGNLVTKPNATRTSIQNLLSNRFARQLMESTPKNKPIHI 174
             +G +   K     C     +GN +  P      I+ L +N FA++L+ S+PK  P+H 
Sbjct: 179 SDIGVQVYRK-----CRLQLLQGNKLANPTDAYLGIKKLTANAFAQKLLASSPKVLPVHA 233

Query: 175 KCDPAKQDSAWNWLER------WMPVSSAKQTL 201
             D +  +S   WLE       W PV   K+T+
Sbjct: 234 -YDTSNPNSNLIWLENWSASCFWKPVPQPKKTI 265

Arabidopsis thaliana (taxid: 3702)

>sp|Q9SF32|IQD1_ARATH Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana GN=IQD1 PE=1 SV=1

 Score = 62.0 bits (149), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 43/165 (26%), Positives = 78/165 (47%), Gaps = 27/165 (16%)

Query: 51  DESVVIVIQAAVRGILAQRELLKLKNVVKLQAAVRGHLVRRHAVGTLRCVQAIVKMQTLV 110
           +E+  I+IQ+  RG LA+RE   ++   +L+  + G +V+R A  TL+C+Q + ++Q+ +
Sbjct: 107 EEAAAILIQSTFRGHLARRESQVMRGQERLKLLMEGSVVQRQAAITLKCMQTLSRVQSQI 166

Query: 111 RARYARLGKE----------------------PDWKAEKDTCNSVTSKGNLVTKPNATRT 148
           R+R  R+ +E                       +W     +   V  +  ++ K  AT  
Sbjct: 167 RSRRIRMSEENQARHKQLLQKHAKELGGLKNGGNWNYSNQSKEQV--EAGMLHKYEATMR 224

Query: 149 SIQNLLSNRFARQLMESTPKN-KPIHIKCDPAKQDSAWNWLERWM 192
             + L      +Q ++S  K   P+ +  DP+     W+WLERWM
Sbjct: 225 RERALAYAFTHQQNLKSFSKTANPMFM--DPSNPTWGWSWLERWM 267

Modulates expression of glucosinolate pathway genes. May associate with nucleic acids and regulate gene expression at the transcriptional or post-transcriptional level.

Arabidopsis thaliana (taxid: 3702)

>sp|Q8LPG9|IQD14_ARATH Protein IQ-DOMAIN 14 OS=Arabidopsis thaliana GN=IQD14 PE=1 SV=1

 Score = 57.4 bits (137), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 43/169 (25%), Positives = 84/169 (49%), Gaps = 32/169 (18%)

Query: 49  PLDESVVIVIQAAVRGILAQRELLKLKNVVKLQAAVRGHLVRRHAVGTLRCVQAIVKMQT 108
           P+  +    IQ A RG +A++    LK +V+LQ  VRG+ V+R  +  ++ +Q +V++Q+
Sbjct: 319 PVQHASATKIQGAFRGYMARKSFRALKGLVRLQGVVRGYSVKRQTINAMKYMQQVVRVQS 378

Query: 109 LVRARYARLGKEPDWKAEKDTCNSVTSK-GN------LVTKPNATRTSIQNL-------- 153
            +++R  ++  E   + EKD      S+ GN      ++TK      S +          
Sbjct: 379 QIQSRRIKM-LENQAQVEKDEAKWAASEAGNDNWDDSVLTKEERDSRSQRKTDAIIKRER 437

Query: 154 -LSNRFARQLMESTPKNKPIHIKCDPAKQDSA-----WNWLERWMPVSS 196
            ++  ++R+L +++PK          + QD+      WNW++R  P++S
Sbjct: 438 SMAYAYSRKLWKNSPK----------STQDNRSFPQWWNWVDRQNPLAS 476

May be involved in cooperative interactions with calmodulins or calmodulin-like proteins. May associate with nucleic acids and regulate gene expression at the transcriptional or post-transcriptional level.

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	626
255538872	849	hypothetical protein RCOM_1596950 [Ricin	0.883	0.651	0.523	1e-152
224065982	814	predicted protein [Populus trichocarpa]	0.929	0.714	0.543	1e-152
224082964	819	predicted protein [Populus trichocarpa]	0.900	0.688	0.530	1e-145
359492724	605	PREDICTED: protein IQ-DOMAIN 32-like [Vi	0.813	0.841	0.544	1e-135
449521231	849	PREDICTED: protein IQ-DOMAIN 32-like [Cu	0.896	0.660	0.449	1e-107
449470110	819	PREDICTED: uncharacterized protein LOC10	0.896	0.684	0.449	1e-107
357438241	784	IQ domain-containing protein [Medicago t	0.851	0.679	0.458	1e-102
449460269	789	PREDICTED: protein IQ-DOMAIN 32-like [Cu	0.972	0.771	0.392	1e-100
449477051	790	PREDICTED: LOW QUALITY PROTEIN: protein	0.972	0.770	0.391	1e-100
297850392	792	protein IQ-DOMAIN 32 [Arabidopsis lyrata	0.782	0.618	0.378	2e-70

>gi|255538872|ref|XP_002510501.1| hypothetical protein RCOM_1596950 [Ricinus communis] gi|223551202|gb|EEF52688.1| hypothetical protein RCOM_1596950 [Ricinus communis]

 Score =  544 bits (1402), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 325/621 (52%), Positives = 411/621 (66%), Gaps = 68/621 (10%)

Query: 35  KTSETIIETDADD---SPLDESVVIVIQAAVRGILAQRELLKLKNVVKLQAAVRGHLVRR 91
           K SETI+ T  +    + L+ESVVIVIQ AVR  LA+++L+KLKN++KLQAAVRGHLVR+
Sbjct: 105 KVSETIVVTKDESEAHAHLEESVVIVIQTAVRQFLARKKLVKLKNLIKLQAAVRGHLVRQ 164

Query: 92  HAVGTLRCVQAIVKMQTLVRARYARLGKEP-------DWKAEKDTCNSVTSKGNLVTKPN 144
           HAVGTLRCVQAIVKMQ LVRAR +RL +E        D K EK    ++           
Sbjct: 165 HAVGTLRCVQAIVKMQALVRARRSRLLQEGSSTEINIDGKHEKAISETL----------- 213

Query: 145 ATRTSIQNLLSNRFARQLMESTPKNKPIHIKCDPAKQDSAWNWLERWMPVSSAKQTLEPG 204
                   LLSN+FARQLMESTPK +PIHIKCDP+K +SAW+WLERWM VSSA+ T +PG
Sbjct: 214 --------LLSNKFARQLMESTPKARPIHIKCDPSKPNSAWSWLERWMSVSSAEPTPQPG 265

Query: 205 SKIEHSENGKNENFASPVETKIPSEVLCDSADSKSRIRETDVLSKIEENLITHDADKFNF 264
           S  E  E+ +  + AS +ET +P E   +  DSKS + E  + S+ ++N +T+DAD F F
Sbjct: 266 STNEQLESERKAHLASLLETVVPCEGSLELGDSKSNLEEIVLPSEAKQNPMTNDADDFEF 325

Query: 265 QQSQPTS--VGDDLELSEPENNGTSDVNEI----------SIETD--SHQ---------- 300
           Q+S PTS  VG   EL + E    SD  E           S+++D  SH           
Sbjct: 326 QESHPTSSLVGGASELPQFEKISKSDAKEALVDINSLPSQSMQSDINSHMHVKLEPSSDI 385

Query: 301 ----SQIVQSDAPSQQELKSLSNKPEMESE---PPKRSMKRFASEDLETEGKKFVFGSRK 353
               SQ +QSD  SQ +L +LS+K E E E    PKRSMKR+ASE LETEGKKFV+GSRK
Sbjct: 386 NTLPSQTMQSDVNSQMQLNALSHKAETEVEQTDQPKRSMKRYASEQLETEGKKFVYGSRK 445

Query: 354 ASNPAFVVAHSKFEELSSSANSGKSISSQHQDVSVDSNANNISSGANSLTRTKNLSIGEN 413
           ASNPAFV AHSKFEELS + NS KS+SS +QD  V+ N + +SSG N+   T  +++ E+
Sbjct: 446 ASNPAFVAAHSKFEELSVTMNSNKSLSSSYQDSGVELNMDTVSSGENTAMSTIEVNMVED 505

Query: 414 SVS---RIQYGGSECGTELSISSTLDSPDRYEAGNTEHEHSAKVSENEICDPKSLNNPDV 470
           SV    R+QYGGSECGTELS++STLDSPDR E G   +EH A+ +E E C+   +   +V
Sbjct: 506 SVPNNLRVQYGGSECGTELSVTSTLDSPDRSEVGAAYNEHEARSTEKETCN-LDIKKDNV 564

Query: 471 KASDASTIPTYDASHSIVGQPEKVDDVRNESVNSLVVIDAA-AQQKPDNSAPDFHKEPDL 529
           ++    T    D S S+V +PEK+D+VR+ SVNS+V  D+     KP+ SAPD   E   
Sbjct: 565 ESKIEPTDSLSDLSDSVVIKPEKLDNVRSVSVNSIVAADSPNIDLKPERSAPDVQVELHS 624

Query: 530 QTGHQMYRSYRSSPEASPRSHITVPESQGTPSSQVSVKAKNNRSDKSGSYRKRKPLSASK 589
           +TG     +YR+SPEASPRSHIT+PESQGTPSSQ+SVKAK  ++DKS S +KRK LSA K
Sbjct: 625 ETGGP---AYRTSPEASPRSHITIPESQGTPSSQLSVKAKKTKTDKSASSQKRKSLSAGK 681

Query: 590 GSPSNPSQNSGARSSTEQLPK 610
            SPSN + +SGARSS EQLPK
Sbjct: 682 RSPSNSNIDSGARSSMEQLPK 702

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224065982|ref|XP_002301992.1| predicted protein [Populus trichocarpa] gi|222843718|gb|EEE81265.1| predicted protein [Populus trichocarpa]

 Score =  543 bits (1399), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 332/611 (54%), Positives = 419/611 (68%), Gaps = 29/611 (4%)

Query: 21  DDLDVSEFP--TPVEPKTSETII----ETDADDSPLDESVVIVIQAAVRGILAQRELLKL 74
           D L +SE P     + + +E I+    E + DD  ++ESVVIVIQAAVRG+LAQ+ELLKL
Sbjct: 106 DKLQLSEKPLSASTDQEVAEAIVFTKDENEVDDR-VEESVVIVIQAAVRGVLAQKELLKL 164

Query: 75  KNVVKLQAAVRGHLVRRHAVGTLRCVQAIVKMQTLVRARYARLGKEPDWKAEK------D 128
           KNVVKLQAAVRG+LVR+HA+GTLRCVQAIVKMQ LVRAR ARL  +  +   +       
Sbjct: 165 KNVVKLQAAVRGYLVRQHAIGTLRCVQAIVKMQALVRARRARLSPKSSYVENEVGGKHGK 224

Query: 129 TCNSVTSKGNLVTKPNATRTSIQNLLSNRFARQLMESTPKNKPIHIKCDPAKQDSAWNWL 188
             +  + K + V KPNAT TSI+ L+ N FARQLMESTPK KPIHIKCD +K++SAWNWL
Sbjct: 225 PISKTSEKESSVIKPNATCTSIEKLVGNSFARQLMESTPKTKPIHIKCDSSKRNSAWNWL 284

Query: 189 ERWMPVSSAKQTLEPGSKIEHSENGKNENFASPVETKIPSEVLCDSADSKSRIRETDVLS 248
           ERWM VSS + T +P    E  E  K ENF S V+T++P E  C+S DSKS I+E  + S
Sbjct: 285 ERWMSVSSVEPTPKPEFITEQLEIEKKENFTSSVQTRVPPEEFCESEDSKSNIKEIALPS 344

Query: 249 KIEENLITHDADKFNFQQSQPTS--VGDDLELSEPENNGTSDVNEISIETDSHQSQIVQS 306
           + EE+LI  DA  F FQ   P S   GD LE  +PE +  SD  E SI  +S  +Q ++S
Sbjct: 345 ESEESLIKSDAFDFKFQVCHPNSPLPGDILEQPQPETSNKSDAEETSITINSLPNQTIES 404

Query: 307 DAPSQQELKSLSNKPEMESE---PPKRSMKRFASEDLETEGKKFVFGSRKASNPAFVVAH 363
           +  S++   SL +K E++ E    PKRSMKR ASE LETEGKKFV+GSRKASNPAF+ A 
Sbjct: 405 EVNSKRVTDSLPHKLELDGEQPDQPKRSMKRGASEQLETEGKKFVYGSRKASNPAFIAAQ 464

Query: 364 SKFEELSSSANSGKSISSQHQDVSVDSNANNISSGANSLTRTKNLSIGENSV---SRIQY 420
           +KFE LSS+A+  +S SS HQD  V+SN     SG ++ +RTK L + ENS    SR+QY
Sbjct: 465 TKFEGLSSTASLSRSFSSSHQDSGVESNTE--ISGIDTESRTKELDMAENSAPHNSRVQY 522

Query: 421 GGSECGTELSISSTLDSPDRYEAGNTEHEHSAKVSENEICDPKSLNNPDVKASDASTIPT 480
            GSECGTELS++STLDSPD +E G  E EH AKVS  E  +P    + DV+  D+S  P 
Sbjct: 523 VGSECGTELSVTSTLDSPDVFEVGAAELEHEAKVSGEETRNPNRTKDLDVEDKDSSKDPV 582

Query: 481 YDASHSIVGQPEKVDDVRNESVNSLVVIDAAAQQ-KPDNSAPDFHKEPDLQTGHQMYRSY 539
             ++ S + QPEK++D   ES N++VV D+A ++  P+ S  D  +E + +TG     +Y
Sbjct: 583 --STLSRLDQPEKLEDAIGESANTIVVADSAQEEMNPEKSVSDVKRELNSETGG---LAY 637

Query: 540 RSSPEASPRSHITVPESQGTPSSQVSVKAKNNRSDKSGSYRKRKPLSASKGSPSNPSQNS 599
           RSSPEASPRSH TVPESQGTPSSQ+SVKAK +R+DKS S +KRK LSASK SPSNP+ +S
Sbjct: 638 RSSPEASPRSHATVPESQGTPSSQLSVKAKKSRADKSSSSQKRKSLSASKRSPSNPNHDS 697

Query: 600 GARSSTEQLPK 610
           GA +S EQL K
Sbjct: 698 GAGTSVEQLSK 708

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224082964|ref|XP_002306910.1| predicted protein [Populus trichocarpa] gi|222856359|gb|EEE93906.1| predicted protein [Populus trichocarpa]

 Score =  523 bits (1346), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 317/598 (53%), Positives = 400/598 (66%), Gaps = 34/598 (5%)

Query: 26  SEFPTPVEPKTSETII----ETDADDSPLDESVVIVIQAAVRGILAQRELLKLKNVVKLQ 81
           S+  T  E +  ETI+    E + DD  +DESVVIVIQAAVRG LAQ+ELLKLK +VKLQ
Sbjct: 134 SQLSTSTEQELPETIVVTKDENEVDDH-VDESVVIVIQAAVRGFLAQKELLKLKYIVKLQ 192

Query: 82  AAVRGHLVRRHAVGTLRCVQAIVKMQTLVRARYARLGKEPDWKAEKDTCNSVTSKGNLVT 141
           AAVRGHLVR+HA+GTLRCVQAIVKMQ LVRAR ARL     W+ ++        K + V 
Sbjct: 193 AAVRGHLVRQHAIGTLRCVQAIVKMQALVRARCARL-----WEEQQ--------KESSVI 239

Query: 142 KPNATRTSIQNLLSNRFARQLMESTPKNKPIHIKCDPAKQDSAWNWLERWMPVSSAKQTL 201
           KP  T  SI+ LL N FA QLMESTPK KPIHIKCD +K +S W WLERWM VSSA+ T 
Sbjct: 240 KPTTTYISIEKLLRNSFAHQLMESTPKRKPIHIKCDSSKPNSGWEWLERWMSVSSAEPTP 299

Query: 202 EPGSKIEHSENGKNENFASPVETKIPSEVLCDSADSKSRIRETDVLSKIEENLITHDADK 261
            P    E  E  K+EN  SP++T+ P E  C+  DSKS + E  + S+ EEN+I  D   
Sbjct: 300 RPDLITEQLEIEKSENVTSPMQTRAPPEGFCELGDSKSNMEEIVLPSESEENMIKSDVSD 359

Query: 262 FNFQQSQPTS--VGDDLELSEPENNGTSDVNEISIETDSHQSQIVQSDAPSQQELKSLSN 319
           F FQ   P S   GD LE  +PE  G SD  E SI  +S  +Q V+S+   +    SL  
Sbjct: 360 FKFQVCHPNSPLAGDILEQPQPEMIGKSDAEETSITINSLPNQTVESEVNYKTVTDSLPC 419

Query: 320 KPEMESE---PPKRSMKRFASEDLETEGKKFVFGSRKASNPAFVVAHSKFEELSSSANSG 376
           K E+E E    PKRSMKR A+E L+TE K+FV+GS KASNPAF+ + +KFE L S+A+  
Sbjct: 420 KQELEGEQPDQPKRSMKREAAEQLDTEEKEFVYGSMKASNPAFIASQTKFEGLGSTASLN 479

Query: 377 KSISSQHQDVSVDSNANNISSGANSLTRTKNLSIGENSV---SRIQYGGSECGTELSISS 433
           +S SS H+D  ++SN +   SG ++ +RTK L + ENSV   SR+QYGGSECGTELS++S
Sbjct: 480 RSSSSSHEDSGIESNTD--ISGIDTESRTKELDMTENSVSHISRVQYGGSECGTELSVTS 537

Query: 434 TLDSPDRYEAGNTEHEHSAKVSENEICDPKSLNNPDVKASDASTIPTYDASHSIVGQPEK 493
           TLDSPD +E G  E EH AKVSE E C+P    + D+K  D+S  P  + SH  + QPEK
Sbjct: 538 TLDSPDAFEVGAAELEHEAKVSEEETCNPNRAKDQDIKDKDSSKDPVSNLSH--MNQPEK 595

Query: 494 VDDVRNESVNSLVVIDAAAQQ-KPDNSAPDFHKEPDLQTGHQMYRSYRSSPEASPRSHIT 552
           ++ V+ ES N++VV D+  ++  P+ S  D  +E + +TG     +YRSSPEASPRS +T
Sbjct: 596 LEVVKGESANTIVVADSTQEEMNPERSVSDVQRELNSETGG---LAYRSSPEASPRSLLT 652

Query: 553 VPESQGTPSSQVSVKAKNNRSDKSGSYRKRKPLSASKGSPSNPSQNSGARSSTEQLPK 610
           VP+SQGTPSSQ+SVKAK +R+D+S S +K K  SASK SPSNP+ +S ARSS EQL K
Sbjct: 653 VPDSQGTPSSQLSVKAKKSRADRSSSSQKHKSSSASKRSPSNPNHDSAARSSVEQLSK 710

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359492724|ref|XP_002280378.2| PREDICTED: protein IQ-DOMAIN 32-like [Vitis vinifera]

 Score =  488 bits (1256), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 285/523 (54%), Positives = 348/523 (66%), Gaps = 14/523 (2%)

Query: 27  EFPTPVEPKTSETIIETDAD---DSPLDESVVIVIQAAVRGILAQRELLKLKNVVKLQAA 83
           +  T    K SET++ ++ +   D  +DES  I IQAAVRG LAQR LLKLKNV+KLQAA
Sbjct: 85  QLSTSFNSKASETVVASENESKVDVNVDESAAIAIQAAVRGFLAQRALLKLKNVIKLQAA 144

Query: 84  VRGHLVRRHAVGTLRCVQAIVKMQTLVRARYARLGKEPDWKAEKDTCNSVTSKGNLVTKP 143
           VRGHLVRRHAVGTLR VQAIVK+Q LVRAR  + GK  D K +  +      K N    P
Sbjct: 145 VRGHLVRRHAVGTLRVVQAIVKIQALVRARRVQAGKLDDRKDKPSS--KPMEKENSSADP 202

Query: 144 NATRTSIQNLLSNRFARQLMESTPKNKPIHIKCDPAKQDSAWNWLERWMPVSSAK--QTL 201
           +AT TSI  LLSN FARQL+ES P+ K IHIKCDP++ +S W WLERWM VSS+   Q  
Sbjct: 203 SATYTSIDKLLSNGFARQLLESNPRTKSIHIKCDPSRPNSGWQWLERWMSVSSSNLGQPQ 262

Query: 202 EPGSKIEHSENGKNENFASPVETKIPSEVLCDSADSKSRIRETDVLSKIEENLITHDADK 261
            P  + E  E+ + EN A  VET I SE   +S D KS +RET V S+ EENLIT+DA+ 
Sbjct: 263 IPVLEKEELEHERVENSAVQVETGITSETTSESEDLKSNVRETAVPSESEENLITYDAES 322

Query: 262 FNFQQSQPTS--VGDDLELSEPEN-NGTSDVNEISIETDSHQSQIVQSDAPSQQELKSLS 318
           F+FQ   PTS  V D+LEL   EN  GTS   +   E D   +  +Q +  S  E  S+S
Sbjct: 323 FDFQTCCPTSSSVKDNLELPPSENTGGTSHAKDSPSEIDLLPNHTMQPEEKSLTEFNSVS 382

Query: 319 NKPEMESEPPKRSMKRFASEDLETEGKKFVFGSRKASNPAFVVAHSKFEELSSSANSGKS 378
            K EMESE PKRS+KRFASE LETEGKKFVFGSRK SNPAFV A SKFEELSS+ANSG+ 
Sbjct: 383 GKSEMESEQPKRSVKRFASEQLETEGKKFVFGSRKVSNPAFVAAQSKFEELSSTANSGRL 442

Query: 379 ISSQHQDVSVDSNANNISSGANSLTRTKNLSIGENSV---SRIQYGGSECGTELSISSTL 435
           IS  HQDV V+SN   +SS A++   TK+L+  +NS+   SR+Q GGSECGTELSI+STL
Sbjct: 443 ISPSHQDVGVESNIETVSSAADTSITTKDLNSEDNSIPPNSRLQVGGSECGTELSITSTL 502

Query: 436 DSPDRYEAGNTEHEHSAKVSENEICDPKSLNNPDVKASDASTIPTYDASHSIVGQPEKVD 495
           DSPD  E G  E ++ AKVSE  IC+  S    DV++ D STI   + S +++  PEK D
Sbjct: 503 DSPDISEVGAMEFDNEAKVSEEVICNLNSTGGLDVESKDVSTIAVSNLSDTMLAPPEKRD 562

Query: 496 DVRNESVNSLVVIDAA-AQQKPDNSAPDFHKEPDLQTGHQMYR 537
            V  E VNS+V +D++  +QKP+ +A D   E D QTG Q YR
Sbjct: 563 AVNGEPVNSVVDVDSSQVKQKPERTASDLQIELDPQTGRQAYR 605

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449521231|ref|XP_004167633.1| PREDICTED: protein IQ-DOMAIN 32-like [Cucumis sativus]

 Score =  394 bits (1012), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 280/623 (44%), Positives = 376/623 (60%), Gaps = 62/623 (9%)

Query: 34  PKTSETIIETDAD-------DSPLDESVVIVIQAAVRGILAQRELLKLKNVVKLQAAVRG 86
           PK S+ + E D         D  L+ES VI IQ  VRG+LAQ+EL+KLKNVVK+QAAVRG
Sbjct: 134 PKGSDKVDEVDVASEKESNVDRELEESTVIAIQTGVRGLLAQKELIKLKNVVKVQAAVRG 193

Query: 87  HLVRRHAVGTLRCVQAIVKMQTLVRARYARLGKE---PDWKAEKDTCNSVTSKGNLV--- 140
            LVRRHAVGTLRC QAIVKMQ +VRAR A L  E   PD +  K+   ++ SK N+V   
Sbjct: 194 FLVRRHAVGTLRCAQAIVKMQAIVRARRAHLSPERLAPDEQHNKNEKENLDSK-NVVKGE 252

Query: 141 ---TKPNATRTSIQNLLSNRFARQLMESTPKNKPIHIKCDPAKQDSAWNWLERWMPVSS- 196
              +K N    SI+ LLSN FARQL+ESTP+NKPI+IKC P+K DSAW WLERWM VSS 
Sbjct: 253 LDSSKSNLRYISIEKLLSNSFARQLLESTPRNKPINIKCVPSKNDSAWKWLERWMAVSSL 312

Query: 197 -----AKQTLEPG----------------SKIEHSENGKNE-NFASPVETKIPSEVLCDS 234
                  + L P                 S  E  + G  E +F  PV+       L ++
Sbjct: 313 DVLEAKNEELVPDQMEKEAEEPKKEELEESDAEQLKRGIEESHFEDPVDLN----PLSET 368

Query: 235 ADSKSRIRETDVLSKIE-ENLITHDADKFNFQQS-QPTSV-GDDLELSEPENNGTSDVNE 291
            D  S   +  ++S  E E+L T+ A+    Q S  P+S+  D+LE   PE    S+  E
Sbjct: 369 EDLNSGTLK--LVSPCESEDLNTYSANNLQSQTSCSPSSLENDNLEQPRPETAKISETEE 426

Query: 292 ISIETDSHQSQIVQS-DAPSQQELKSLSNKPEMESEPPKRSMKRFASEDLETEGKKFVFG 350
            + +  S Q + +Q+ D   Q E  S S+KP+MESE     +KR A E LE EGKK  FG
Sbjct: 427 TATKVSSVQHEKIQTDDVDVQTESNSSSDKPQMESE-QVNPLKRLAPEQLENEGKK--FG 483

Query: 351 SRKASNPAFVVAHSKFEELSSSANSGKSISSQHQDVSVDSNANNISSGA-NSLTRTKNLS 409
           SRK +NP+F+ A +KFE+LSS+ +   SISS +QD  ++ ++  +SS   +++ RTK  S
Sbjct: 484 SRKMNNPSFINAQAKFEQLSSAPDLIGSISSMNQDDRIEPHSETVSSALEDTVPRTKETS 543

Query: 410 IGENSVSR----IQYGGSECGTELSISSTLDSPDRYEAGNTEHEHSAKVSENEICDPKSL 465
             EN V+     IQ  GSECGTELSISSTLDSPD  EAG  +      VSE  + DP S 
Sbjct: 544 AVENIVTPACRIIQVSGSECGTELSISSTLDSPDISEAGMAD-PLPNDVSEKVVQDPSSD 602

Query: 466 NNPDVKASDASTIPTYDASHSIVGQ-PEKVDDVRNESVNSLVVIDAA-AQQKPDNSAPDF 523
            + +V+   AST P  +    ++ Q  E+  +    S+ S+ V+D++ ++ K   S+ D 
Sbjct: 603 LSVEVEMK-ASTTPVQNDIQLLLDQSAEEASESNGHSITSVPVVDSSPSESKLGRSSSDQ 661

Query: 524 HKEPDLQTGHQMYRSYRSSPEASPRSHITVPESQGTPSSQVSVKAKNNRSDKSGSYRKRK 583
            +E      H   ++Y+SSPEASPRSH+TVPESQGTPSSQVS KAK +++DK+ S++K+K
Sbjct: 662 QREQQEAGSHHDNQTYKSSPEASPRSHLTVPESQGTPSSQVSTKAKRDKTDKAVSFQKQK 721

Query: 584 PLSASKGSPSNPSQNSGARSSTE 606
           P+SA K SPS+ ++NS +RSST+
Sbjct: 722 PISAVKKSPSSLNRNSASRSSTD 744

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449470110|ref|XP_004152761.1| PREDICTED: uncharacterized protein LOC101211948 [Cucumis sativus]

 Score =  394 bits (1012), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 280/623 (44%), Positives = 376/623 (60%), Gaps = 62/623 (9%)

Query: 34  PKTSETIIETDAD-------DSPLDESVVIVIQAAVRGILAQRELLKLKNVVKLQAAVRG 86
           PK S+ + E D         D  L+ES VI IQ  VRG+LAQ+EL+KLKNVVK+QAAVRG
Sbjct: 104 PKGSDKVDEVDVASEKESNVDRELEESTVIAIQTGVRGLLAQKELIKLKNVVKVQAAVRG 163

Query: 87  HLVRRHAVGTLRCVQAIVKMQTLVRARYARLGKE---PDWKAEKDTCNSVTSKGNLV--- 140
            LVRRHAVGTLRC QAIVKMQ +VRAR A L  E   PD +  K+   ++ SK N+V   
Sbjct: 164 FLVRRHAVGTLRCAQAIVKMQAIVRARRAHLSPERLAPDEQHNKNEKENLDSK-NVVKGE 222

Query: 141 ---TKPNATRTSIQNLLSNRFARQLMESTPKNKPIHIKCDPAKQDSAWNWLERWMPVSSA 197
              +K N    SI+ LLSN FARQL+ESTP+NKPI+IKC P+K DSAW WLERWM VSS 
Sbjct: 223 LDSSKSNLRYISIEKLLSNSFARQLLESTPRNKPINIKCVPSKNDSAWKWLERWMAVSSL 282

Query: 198 ------KQTLEPG----------------SKIEHSENGKNE-NFASPVETKIPSEVLCDS 234
                  + L P                 S  E  + G  E +F  PV+       L ++
Sbjct: 283 DVLEAKNEELVPDQMEKEAEEPKKEELEESDAEQLKRGIEESHFEDPVDLN----PLSET 338

Query: 235 ADSKSRIRETDVLSKIE-ENLITHDADKFNFQQS-QPTSV-GDDLELSEPENNGTSDVNE 291
            D  S   +  ++S  E E+L T+ A+    Q S  P+S+  D+LE   PE    S+  E
Sbjct: 339 EDLNSGTLK--LVSPCESEDLNTYSANNLQSQTSCSPSSLENDNLEQPRPETAKISETEE 396

Query: 292 ISIETDSHQSQIVQS-DAPSQQELKSLSNKPEMESEPPKRSMKRFASEDLETEGKKFVFG 350
            + +  S Q + +Q+ D   Q E  S S+KP+MESE     +KR A E LE EGKK  FG
Sbjct: 397 TATKVSSVQHEKIQTDDVDVQTESNSSSDKPQMESE-QVNPLKRLAPEQLENEGKK--FG 453

Query: 351 SRKASNPAFVVAHSKFEELSSSANSGKSISSQHQDVSVDSNANNISSGA-NSLTRTKNLS 409
           SRK +NP+F+ A +KFE+LSS+ +   SISS +QD  ++ ++  +SS   +++ RTK  S
Sbjct: 454 SRKMNNPSFINAQAKFEQLSSAPDLIGSISSMNQDDRIEPHSETVSSALEDTVPRTKETS 513

Query: 410 IGENSVSR----IQYGGSECGTELSISSTLDSPDRYEAGNTEHEHSAKVSENEICDPKSL 465
             EN V+     IQ  GSECGTELSISSTLDSPD  EAG  +      VSE  + DP S 
Sbjct: 514 AVENIVTPACRIIQVSGSECGTELSISSTLDSPDISEAGMAD-PLPNDVSEKVVQDPSSD 572

Query: 466 NNPDVKASDASTIPTYDASHSIVGQ-PEKVDDVRNESVNSLVVIDAA-AQQKPDNSAPDF 523
            + +V+   AST P  +    ++ Q  E+  +    S+ S+ V+D++ ++ K   S+ D 
Sbjct: 573 LSVEVEMK-ASTTPVQNDIQLLLDQSAEEASESNGYSITSVPVVDSSPSESKLGRSSSDQ 631

Query: 524 HKEPDLQTGHQMYRSYRSSPEASPRSHITVPESQGTPSSQVSVKAKNNRSDKSGSYRKRK 583
            +E      H   ++Y+SSPEASPRSH+TVPESQGTPSSQVS KAK +++DK+ S++K+K
Sbjct: 632 QREQQEAGSHHDNQTYKSSPEASPRSHLTVPESQGTPSSQVSTKAKRDKTDKAVSFQKQK 691

Query: 584 PLSASKGSPSNPSQNSGARSSTE 606
           P+SA K SPS+ ++NS +RSST+
Sbjct: 692 PISAVKKSPSSLNRNSASRSSTD 714

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357438241|ref|XP_003589396.1| IQ domain-containing protein [Medicago truncatula] gi|355478444|gb|AES59647.1| IQ domain-containing protein [Medicago truncatula]

 Score =  379 bits (972), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 266/580 (45%), Positives = 346/580 (59%), Gaps = 47/580 (8%)

Query: 34  PKTSETIIETDADDSPLDESVVIVIQAAVRGILAQRELLKLKNVVKLQAAVRGHLVRRHA 93
           P+T  T  E   D +P  ES VI+IQA++RG LA+R LLK KN VKLQAAVRGHLVRRHA
Sbjct: 107 PETIVTETENKVDVNP-PESAVIIIQASIRGYLARRALLKSKNAVKLQAAVRGHLVRRHA 165

Query: 94  VGTLRCVQAIVKMQTLVRARYARLGKEPDWKAEKDTCN---SVTSKGNLVTKPNATRTSI 150
           VGTLRCVQAI KMQ LVR+R+A+       K+  D  N     T   +   + N   TS+
Sbjct: 166 VGTLRCVQAIAKMQLLVRSRHAQ-------KSHTDGKNDYSKTTDNEHYTAESNVKHTSV 218

Query: 151 QNLLSNRFARQLMESTPKNKPIHIKCDPAKQDSAWNWLERWMPVSSAKQTLE---PGSKI 207
           + LLSN+FA QL+ESTPKNKPIH+KCDP+K DSAW WLERWM V SAK + E   P    
Sbjct: 219 EKLLSNKFACQLLESTPKNKPIHVKCDPSKGDSAWKWLERWMFV-SAKDSAEDKKPICTT 277

Query: 208 EHSENGKNENFASPVETKIPSEVLCDSADSKSRIRETDVLSKIEENLITHDADKFNFQQS 267
           E S+  K+   AS  ET IPS+V+   +DS        + S+ EE   T+     +FQ S
Sbjct: 278 EQSDETKDSTHASQSETDIPSQVILQLSDSP-------LPSEDEEKTATYYDTNSHFQAS 330

Query: 268 QPTS--VGDDLELSEPENNGTSDVNEISIETDSHQSQIVQSDAPSQQELKSLSNKPEMES 325
             +S  + D+LE S PE   T D    S E DS Q++I++S+A    E  S  N+ E+  
Sbjct: 331 LSSSSLIKDNLEESPPEKTVTYDSKVTSTEIDSFQNEIMESNASVGHEPNSPQNQ-EI-G 388

Query: 326 EPPKRSMKRFASEDLETEGKKFVFGSRKASNPAFVVAHSKFEELSSSANSGKSISSQHQD 385
           E  K S K FAS+ LETEGKK  FGSRK SNP+F+ A SKFEELSS++NSG+      QD
Sbjct: 389 EQYKLSTKAFASDQLETEGKKITFGSRKLSNPSFIAAQSKFEELSSNSNSGRPSGLLDQD 448

Query: 386 VSVDSNANNISSGANSLTRTKNLSIGENSVSRIQYGGS-ECGTELSISSTLDSPDRYEAG 444
           VSV+S        A+S   +K     ENS          E GT LSISSTLDSPDR E  
Sbjct: 449 VSVESQ-------ADSAYISKEFISSENSTPYPSRNADPESGTVLSISSTLDSPDRSET- 500

Query: 445 NTEHEHSAKVSENEICDPKSLNNPDVKA-SDASTIPTYDASHSIVGQPEKVDDVRNESVN 503
             E EH AK     I +P++  +  V+A +  S +P  D+      Q E V+  R   V+
Sbjct: 501 -LEIEHDAKDLVEGIVNPENKTDHGVEANTPTSNLPISDSD-----QLETVNGSRGNVVD 554

Query: 504 SLVVIDAAAQQ-KPDNSAPDFHKEPDLQTGHQMYRSYRSSPEASPRSHITVPESQGTPSS 562
           S++  ++     +P+  A D  +E   QT   + + +  S +ASP S++T+PESQGTPSS
Sbjct: 555 SVMPENSKEHAVEPEKIASDLLRE---QT-ETVLQDFTYSQQASPGSYMTIPESQGTPSS 610

Query: 563 QVSVKAKNNRSDKSGSYRKRKPLSASKGSPSNPSQNSGAR 602
           QVSVK K N+ +K+GS  +R+ LS    SP+N +Q+SG+R
Sbjct: 611 QVSVKTKENKINKTGSSSRRRVLSVGNKSPANSNQDSGSR 650

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449460269|ref|XP_004147868.1| PREDICTED: protein IQ-DOMAIN 32-like [Cucumis sativus]

 Score =  371 bits (953), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 275/701 (39%), Positives = 377/701 (53%), Gaps = 92/701 (13%)

Query: 1   MGRSNSCFKIITCGSDSAG------------ND-----------------DLDVSEFPTP 31
           MG+S SCFKII CG DS+             ND                 +  ++E P+P
Sbjct: 1   MGKSTSCFKIIACGGDSSDKDDIDISESKRLNDKQGWSFRKRSNRQRVLSNTVIAEIPSP 60

Query: 32  ------------VEPKTSETIIETD-----ADDSP------------------------- 49
                        +P T+ +I+E D     A + P                         
Sbjct: 61  GNKETFETVNINFQPPTNGSILEKDPGLQCASEKPQLQSTENLKESEVVDVIQKESKVDV 120

Query: 50  -LDESVVIVIQAAVRGILAQRELLKLKNVVKLQAAVRGHLVRRHAVGTLRCVQAIVKMQT 108
            ++E  VI+IQA VRG LA+ ELLK+KNVVKLQAA+RGHLVR+HAV TLRC+QAI+K+Q 
Sbjct: 121 DIEEHSVIIIQAVVRGWLARGELLKVKNVVKLQAAIRGHLVRKHAVETLRCIQAIIKLQA 180

Query: 109 LVRARYARLGKEPDWKAEKDTCNSVTSKGNLVTKPNATRTSIQNLLSNRFARQLMESTPK 168
           LVRAR A L  E     E D+ +  T +   + K   T  SI+ LLS  F RQL++ST  
Sbjct: 181 LVRARCAHLALERSNSEELDSNSYKTLEKEKLRKSRETSVSIEKLLSKSFVRQLLKSTST 240

Query: 169 NKPIHIKCDPAKQDSAWNWLERWMPVSSAKQTLEPGSKIEHSENGKNEN---FASPVETK 225
            +PI+I     K ++ W WLERW   SS        ++    E GK +     AS V   
Sbjct: 241 TEPINISYHQFKSETTWKWLERWTSFSSVDVLEIKEAQFLTEEQGKEKKETLCASEVIFG 300

Query: 226 IPSEVLCDSADSKSRIRETDVLSKIEENLITHDADKFNFQQSQPTSVGDDLELSE----P 281
             S VLC S DS++ I E+ V S+ E+NLIT+D D   FQ  Q TS   ++E  +     
Sbjct: 301 TESNVLCKSDDSRTCIGESVVHSESEDNLITYDMDSAQFQPRQLTS--SEMESLDQAWLE 358

Query: 282 ENNGTSDVNEISIETDSHQSQIVQSDAPSQQELKSLSNKPEMESEPPKRSMKRFASEDLE 341
           EN   S+V    +E +SH  Q ++  A SQ +  +   K E E +  K S   F SE  E
Sbjct: 359 ENTDVSNVKVTLMEANSHLDQRIELVADSQLQCNTHIEKLEKEFQQNKTSTGMFTSEQPE 418

Query: 342 TEGKKFVFGSRKASNPAFVVAHSKFEELSSSANSGKSISSQHQDVSVDSNANNISSGANS 401
            + KK +FGSR+ASNPAF+ A SKF+ELSS  NSG+SI+S +Q+   +S    +SS + +
Sbjct: 419 VKEKKTIFGSRRASNPAFIAAQSKFQELSSVENSGRSINSSYQETGAESCIGAMSSASGT 478

Query: 402 LTRTKNLSIGENSVSR----IQYGGSECGTELSISSTLDSPDRYEAGNTEHEHSAKVSEN 457
             RT+ LS  E+ ++     ++ GGS+CGTELSI+STLDSPD  EAG  E+EH   V+E 
Sbjct: 479 APRTEGLSTTEDYITNQSTTVRVGGSDCGTELSITSTLDSPDLSEAGAFEYEHETNVTEI 538

Query: 458 EICDPKSLNNPDVKASDASTIPTYDASHSIVGQPEKVDDVRNESVNSLVVIDAAAQQKPD 517
            + D  S  + ++    A +    +     +G PEK   V ++S+N + +     + KPD
Sbjct: 539 CVHDRSSNKSTEIDVGSAPSSLVSNLCQPRLGSPEKSSVVSSKSINKITMNSTQNEVKPD 598

Query: 518 NSAPDFHKEPDLQTGHQMYRSYRSSPEASPRSHITVPESQGTPSSQVSVKAKNNRSDKSG 577
            +A D  +E D +TG+     YRSSP ASPRSH T  ESQGTPSSQ+S+K+   ++D S 
Sbjct: 599 ANASDQQREQDAETGN-----YRSSPSASPRSHATFLESQGTPSSQISIKSNKRKTDASR 653

Query: 578 SYRKRKPLSASKGSPSNPSQNSGARSSTEQLPK--RSEKRQ 616
           S  KRK L+A K SPS   +N    +  E LPK  + EKR+
Sbjct: 654 SNLKRKSLTAGKKSPSKLHRNVDLPNHFEPLPKDEKIEKRR 694

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449477051|ref|XP_004154914.1| PREDICTED: LOW QUALITY PROTEIN: protein IQ-DOMAIN 32-like [Cucumis sativus]

 Score =  371 bits (952), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 275/702 (39%), Positives = 377/702 (53%), Gaps = 93/702 (13%)

Query: 1   MGRSNSCFKIITCGSDSAG------------ND-----------------DLDVSEFPTP 31
           MG+S SCFKII CG DS+             ND                 +  ++E P+P
Sbjct: 1   MGKSTSCFKIIACGGDSSDKDDIDISESKRLNDKQGWSFRKRSNRQRVLSNTVIAEIPSP 60

Query: 32  ------------VEPKTSETIIETD-----ADDSP------------------------- 49
                        +P T+ +I+E D     A + P                         
Sbjct: 61  GNKETFETVNINFQPPTNGSILEKDPGLQCASEKPQLQSTENLKESEVVDVIXQKESKVD 120

Query: 50  --LDESVVIVIQAAVRGILAQRELLKLKNVVKLQAAVRGHLVRRHAVGTLRCVQAIVKMQ 107
             ++E  VI+IQA VRG LA+ ELLK+KNVVKLQAA+RGHLVR+HAV TLRC+QAI+K+Q
Sbjct: 121 VDIEEHSVIIIQAVVRGWLARGELLKVKNVVKLQAAIRGHLVRKHAVETLRCIQAIIKLQ 180

Query: 108 TLVRARYARLGKEPDWKAEKDTCNSVTSKGNLVTKPNATRTSIQNLLSNRFARQLMESTP 167
            LVRAR A L  E     E D+ +  T +   + K   T  SI+ LLS  F RQL++ST 
Sbjct: 181 ALVRARCAHLALERSNSEELDSNSYKTLEKEKLRKSRETSVSIEKLLSKSFVRQLLKSTS 240

Query: 168 KNKPIHIKCDPAKQDSAWNWLERWMPVSSAKQTLEPGSKIEHSENGKNEN---FASPVET 224
             +PI+I     K ++ W WLERW   SS        ++    E GK +     AS V  
Sbjct: 241 TTEPINISYHQFKSETTWKWLERWTSFSSVDVLEIKEAQFLTEEQGKEKKETLCASEVIF 300

Query: 225 KIPSEVLCDSADSKSRIRETDVLSKIEENLITHDADKFNFQQSQPTSVGDDLELSE---- 280
              S VLC S DS++ I E+ V S+ E+NLIT+D D   FQ  Q TS   ++E  +    
Sbjct: 301 GTESNVLCKSDDSRTCIGESVVHSESEDNLITYDMDSAQFQPRQLTS--SEMESLDQAWL 358

Query: 281 PENNGTSDVNEISIETDSHQSQIVQSDAPSQQELKSLSNKPEMESEPPKRSMKRFASEDL 340
            EN   S+V    +E +SH  Q ++  A SQ +  +   K E E +  K S   F SE  
Sbjct: 359 EENTDVSNVKVTLMEANSHLDQRIELVADSQLQCNTHIEKLEKEFQQNKTSTGMFTSEQP 418

Query: 341 ETEGKKFVFGSRKASNPAFVVAHSKFEELSSSANSGKSISSQHQDVSVDSNANNISSGAN 400
           E + KK +FGSR+ASNPAF+ A SKF+ELSS  NSG+SI+S +Q+   +S    +SS + 
Sbjct: 419 EVKEKKTIFGSRRASNPAFIAAQSKFQELSSVENSGRSINSSYQETGAESCIGAMSSASG 478

Query: 401 SLTRTKNLSIGENSVSR----IQYGGSECGTELSISSTLDSPDRYEAGNTEHEHSAKVSE 456
           +  RT+ LS  E+ ++     ++ GGS+CGTELSI+STLDSPD  EAG  E+EH   V+E
Sbjct: 479 TAPRTEGLSTTEDYITNQSTTVRVGGSDCGTELSITSTLDSPDLSEAGAFEYEHETNVTE 538

Query: 457 NEICDPKSLNNPDVKASDASTIPTYDASHSIVGQPEKVDDVRNESVNSLVVIDAAAQQKP 516
             + D  S  + ++    A +    +     +G PEK   V ++S+N + +     + KP
Sbjct: 539 ICVHDRSSNKSTEIDVGSAPSSLVSNLCQPRLGSPEKSSVVSSKSINKITMNSTQNEVKP 598

Query: 517 DNSAPDFHKEPDLQTGHQMYRSYRSSPEASPRSHITVPESQGTPSSQVSVKAKNNRSDKS 576
           D +A D  +E D +TG+     YRSSP ASPRSH T  ESQGTPSSQ+S+K+   ++D S
Sbjct: 599 DANASDQQREQDAETGN-----YRSSPSASPRSHATFLESQGTPSSQISIKSNKRKTDAS 653

Query: 577 GSYRKRKPLSASKGSPSNPSQNSGARSSTEQLPK--RSEKRQ 616
            S  KRK L+A K SPS   +N    +  E LPK  + EKR+
Sbjct: 654 RSNLKRKSLTAGKKSPSKLHRNVDLPNHFEPLPKDEKIEKRR 695

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297850392|ref|XP_002893077.1| protein IQ-DOMAIN 32 [Arabidopsis lyrata subsp. lyrata] gi|297338919|gb|EFH69336.1| protein IQ-DOMAIN 32 [Arabidopsis lyrata subsp. lyrata]

 Score =  273 bits (699), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 228/602 (37%), Positives = 313/602 (51%), Gaps = 112/602 (18%)

Query: 27  EFPTPVEPKTSET----IIETDAD---DSPLDESVVIVIQAAVRGILAQRELLKLKNVVK 79
           E  + VEP+ SET    II  ++D   D  LDESVV+VIQAA+RG LA+RELL+ K V+K
Sbjct: 181 EIASKVEPEESETDDVIIISKESDENVDEMLDESVVVVIQAAIRGFLARRELLRRKKVIK 240

Query: 80  LQAAVRGHLVRRHAVGTLRCVQAIVKMQTLVRARYARLGKEPDWKAEKDTCNSVTSKGNL 139
           LQAAVRGHLVR  A+G+LRCVQAIVKMQ +VRAR++           KD      S+ + 
Sbjct: 241 LQAAVRGHLVRSQAMGSLRCVQAIVKMQAMVRARHST----------KDV-----SRVSA 285

Query: 140 VTKPNATRTSIQNLLSNRFARQLMESTPKNKPIHIKCDPAKQDSAWNWLERWMPVSSAKQ 199
           ++       + Q LL N+FA+ LMESTPK KPI IKCDP K  SAWNWLERWM V   ++
Sbjct: 286 ISDKAEGNAAAQKLLENKFAKHLMESTPKTKPISIKCDPTKPSSAWNWLERWMSVPKPEK 345

Query: 200 TLEPGSKIEHSENGKNENFASPVETKIPSEVLCDSADSKSRIRETDVLSKIEENLITHDA 259
           T +     E  +  + +N       K+  +V   ++DS        V +K E +L +++A
Sbjct: 346 TSKADLTTEEQQLEETQNV------KVSPQVDFVNSDST-------VETKTEADLSSYEA 392

Query: 260 DKFNFQQSQPTSVGDDLELSEPENNGTSDVNEISIET--DSHQSQIVQSDAPSQQELKSL 317
            K           G  +ELSE E     D  E S E   DS QSQ + +  P      SL
Sbjct: 393 SKL---------AGQHVELSETEKMSQYDSPEASAEVYYDSIQSQPLAAKEPD-----SL 438

Query: 318 SNKPEMESEPPKRSMKRFASEDLETEGKKFVFGSRKASNPAFVVAHSKFEELSSSANSGK 377
             +PE      K S+KR                  K SNP+F+ A SKFEEL+SS  S K
Sbjct: 439 LEEPEYVDGQLKHSLKR------------------KVSNPSFIAAQSKFEELTSSTGSNK 480

Query: 378 SISSQHQD-VSVDSNANNISSGANSLTRTKNLSIGENSVSRIQYGGSECGTELSISSTLD 436
           +++   +D VS +    +I S   +  +  +L      V+  +  GSECGTELS++S+LD
Sbjct: 481 AMTLSPKDGVSGEEGKTDIDSHTTNTKKDHSL----EDVTPAELSGSECGTELSVTSSLD 536

Query: 437 SPDRY-EAGNTEHEHSAKVSENE--ICDPKSLNNPDVKASDASTIPTYDASHSIVGQP-E 492
           S ++  +A   E    AK+ E++    D   L   DVK  DA+++        I+  P E
Sbjct: 537 SLEKKSDAEGAEPRVEAKLLEDDSFKTDQAELIEIDVK--DATSL-------GILEDPKE 587

Query: 493 KVDDVRNESVNSLVVIDAAAQQKPDNSAPDFHKEPDLQTGHQMYRSYRSSPEASPRSH-- 550
           KV++ ++E      V  +  Q +   S PD  K               S P+AS  S   
Sbjct: 588 KVENAKDE------VEISVTQHESVVSTPDSKKR---------RAEDESGPQASTLSEGA 632

Query: 551 ---ITVPESQGTPSSQVS--VKAKNNRSDKSGSYRKRKPLSASKGSPSNPSQNSGARSST 605
              +T+ ESQ TP+SQ S  VKA+  +S+KSGS +KRK    SK   S+P Q  G+  +T
Sbjct: 633 LTPMTITESQATPASQASSSVKARKGKSEKSGSSQKRK---VSKKITSSPKQEIGSGEAT 689

Query: 606 EQ 607
           EQ
Sbjct: 690 EQ 691

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	626
TAIR|locus:2035428	794	iqd32 "AT1G19870" [Arabidopsis	0.383	0.302	0.438	3e-46
TAIR|locus:2034929	572	IQD30 "AT1G18840" [Arabidopsis	0.429	0.470	0.307	1.9e-18
TAIR|locus:2019205	587	IQD31 "AT1G74690" [Arabidopsis	0.431	0.459	0.275	8.4e-18
TAIR|locus:2058862	636	IQD29 "AT2G02790" [Arabidopsis	0.452	0.444	0.279	4.3e-15
TAIR|locus:2012507	664	IQD28 "AT1G14380" [Arabidopsis	0.480	0.453	0.256	3.3e-14
TAIR|locus:2090409	422	IQD5 "AT3G22190" [Arabidopsis	0.134	0.199	0.464	2.3e-12
TAIR|locus:2081775	103	IQD20 "AT3G51380" [Arabidopsis	0.119	0.728	0.466	6.8e-10
TAIR|locus:2134628	534	iqd17 "AT4G00820" [Arabidopsis	0.137	0.161	0.448	2.9e-09
TAIR|locus:2057459	416	IQD6 "AT2G26180" [Arabidopsis	0.111	0.168	0.528	4.1e-09
TAIR|locus:2130200	387	IQD19 "AT4G14750" [Arabidopsis	0.140	0.227	0.411	9.6e-09

TAIR|locus:2035428 iqd32 "AT1G19870" [Arabidopsis thaliana (taxid:3702)]

 Score = 463 (168.0 bits), Expect = 3.0e-46, Sum P(2) = 3.0e-46
 Identities = 122/278 (43%), Positives = 162/278 (58%)

Query:    27 EFPTPVEPKTSET----IIETDAD---DSPLDESVVIVIQAAVRGILAQRELLKLKNVVK 79
             E  + VEP+ SE+    I+  ++D   D  LDESV++VIQAAVRG LA+RELL+ K V+K
Sbjct:   183 EMASKVEPEESESDDVIIVRKESDEKVDEKLDESVIVVIQAAVRGFLARRELLRSKKVIK 242

Query:    80 LQAAVRGHLVRRHAVGTLRCVQAIVKMQTLVRARYARLGKEPDWKAEKDTCNSVTSKGNL 139
             LQAAVRGHLVR  A+G+LRCVQAIVKMQ +VRAR++           KD   S  S  + 
Sbjct:   243 LQAAVRGHLVRSQAMGSLRCVQAIVKMQAMVRARHST----------KD--GSRVSATSD 290

Query:   140 VTKPNATRTSIQNLLSNRFARQLMESTPKNKPIHIKCDPAKQDSAWNWLERWMPVSSAKQ 199
              ++PNA   + Q LL N+FA+ LMESTPK KPI+IKCDP K  SAWNWLERWM V   ++
Sbjct:   291 KSEPNA---AAQKLLENKFAKHLMESTPKTKPINIKCDPTKPSSAWNWLERWMSVPKPEK 347

Query:   200 TLEPG-----SKIEHSENGKNE------NFASPVETK----IPSEVLCDSADSKSRIRET 244
             T +         +E ++N K        N  S VE K    +PS            + ET
Sbjct:   348 TSKANLTTEEQNLEETQNVKISPQADFVNSDSTVENKTETDMPSYEASKVEGQNVELSET 407

Query:   245 DVLSKIEENLITHDADKFNFQQSQPTSVGDDLELSEPE 282
             + +S+ +    + +   ++  QSQP +   D  L EPE
Sbjct:   408 EKMSQYDSPEASAEV-YYDSIQSQPLAAKPDSLLEEPE 444

GO:0005516 "calmodulin binding" evidence=ISS

GO:0009941 "chloroplast envelope" evidence=IDA

GO:0005886 "plasma membrane" evidence=IDA

GO:0005634 "nucleus" evidence=IDA

GO:0005829 "cytosol" evidence=IDA

GO:0009737 "response to abscisic acid stimulus" evidence=IDA

GO:0000394 "RNA splicing, via endonucleolytic cleavage and ligation" evidence=RCA

GO:0009086 "methionine biosynthetic process" evidence=RCA

GO:0010048 "vernalization response" evidence=RCA

TAIR|locus:2034929 IQD30 "AT1G18840" [Arabidopsis thaliana (taxid:3702)]

 Score = 250 (93.1 bits), Expect = 1.9e-18, Sum P(2) = 1.9e-18
 Identities = 95/309 (30%), Positives = 147/309 (47%)

Query:    16 DSAGNDDLDVSEFPTPVEPKTSETIIETDADDSPLDES-------VVIVIQAAVRGILAQ 68
             +   +D++ VSE    V+P  S+ +     DDS L ES         + +QAA RG LA+
Sbjct:    72 EDVSDDEIQVSE----VQPTDSQDVASVP-DDS-LSESEKIQQEIAAVTVQAAYRGYLAR 125

Query:    69 RELLKLKNVVKLQAAVRGHLVRRHAVGTLRCVQAIVKMQTLVRARYAR---LGKEPDWKA 125
             R    LK +++LQA +RGH+VRR AV TL CV  IV++Q L R R  R   +G E   K 
Sbjct:   126 RAFKILKGIIRLQALIRGHMVRRQAVSTLCCVMGIVRLQALARGREIRHSDIGVEVQRKC 185

Query:   126 EKDTCNSVTSKGNLVTKPNATRTSIQNLLSNRFARQLMESTPKNKPIHIKCDPAKQDSAW 185
                    + +K N V   ++    I  L  N FA++L+ S+P   P+ +  D +  +S W
Sbjct:   186 HLHH-QPLENKANSVVDTHSY-LGINKLTGNAFAQKLLASSPNVLPLSLDNDSS--NSIW 241

Query:   186 --NWLER--WMPVSSAKQTLEPGSKIEHSENGK--NENFASPVET--KIPSEVLCDSADS 237
               NW     W PV   K+     S+ + + N +     FA P ++  K+PS  L    D+
Sbjct:   242 LENWSASCFWKPVPQPKKASLRKSQKKFASNPQIVEAEFARPKKSVRKVPSSNL----DN 297

Query:   238 KSRIRETDVLSKIEENLITHDADKFNFQQS-QPTSVGDDLELS-EPENNGTSDVNEISIE 295
              S  + +  L K + +       K +  QS +P    D+ ++  E    G   V+   +E
Sbjct:   298 SSVAQTSSELEKPKRSF-----RKVSTSQSVEPLPSMDNPQVDLEKVKRGLRKVHNPVVE 352

Query:   296 TDSHQSQIV 304
              +S Q Q+V
Sbjct:   353 -NSIQPQLV 360

GO:0005516 "calmodulin binding" evidence=ISS

GO:0008150 "biological_process" evidence=ND

GO:0005773 "vacuole" evidence=IDA

TAIR|locus:2019205 IQD31 "AT1G74690" [Arabidopsis thaliana (taxid:3702)]

 Score = 242 (90.2 bits), Expect = 8.4e-18, Sum P(2) = 8.4e-18
 Identities = 77/280 (27%), Positives = 118/280 (42%)

Query:     3 RSNSCFKIITCGSDSAGNDDLDVSEFPTPVEPKTSETIIETDADDSPLDESVVIV-IQAA 61
             RS    +    G +   +D++++ E  +      +     + +D   +   +    +QAA
Sbjct:    63 RSGGMLETQNVGPEEISDDEIELPEGKSTDSQNVAPVQDHSLSDAERIQREIAATSVQAA 122

Query:    62 VRGILAQRELLKLKNVVKLQAAVRGHLVRRHAVGTLRCVQAIVKMQTLVRARYARLGKEP 121
              RG LA+R    LK +++LQA +RGHLVRR AV TL  V  IV++Q   R R  R  K  
Sbjct:   123 FRGYLARRAFWALKGIIRLQALIRGHLVRRQAVATLFSVMGIVRLQAFARGREIR--KSD 180

Query:   122 DWKAEKDTCNSVTSKGNLVTKPNATRTSIQNLLSNRFARQLMESTPKNKPIHIKCDPAKQ 181
                     C     +GN +  P      I+ L +N FA++L+ S+PK  P+H   D +  
Sbjct:   181 IGVQVYRKCRLQLLQGNKLANPTDAYLGIKKLTANAFAQKLLASSPKVLPVHAY-DTSNP 239

Query:   182 DSAWNWLERWMPVSSAKQTLEPGSKIEHSENGKNENFASPVETKIPSEVLCDSADSKSRI 241
             +S   WLE W      K   +P   I  S   +N         K    V    A   S  
Sbjct:   240 NSNLIWLENWSASCFWKPVPQPKKTI--SRKPQNRLLVEAESAKPKKSVRKVPA---SNF 294

Query:   242 RETDVLSKIEENLITHDADKFNFQQSQPTSVGD-DLELSE 280
               + V +  E         K + Q  +P +V D  +EL +
Sbjct:   295 ESSSVQTSFEFEKPKRSFRKVSSQSIEPPAVEDPQIELEK 334

GO:0005516 "calmodulin binding" evidence=ISS

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0005886 "plasma membrane" evidence=IDA

GO:0005829 "cytosol" evidence=IDA

GO:0006084 "acetyl-CoA metabolic process" evidence=RCA

GO:0007020 "microtubule nucleation" evidence=RCA

GO:0010075 "regulation of meristem growth" evidence=RCA

TAIR|locus:2058862 IQD29 "AT2G02790" [Arabidopsis thaliana (taxid:3702)]

 Score = 220 (82.5 bits), Expect = 4.3e-15, Sum P(2) = 4.3e-15
 Identities = 86/308 (27%), Positives = 142/308 (46%)

Query:    44 DADDSPLDESVVIVIQAAVRGILAQRELLKLKNVVKLQAAVRGHLVRRHAVGTLRCVQAI 103
             D+++  L+E+   V QAA+R   A+ E   LK + ++QA +RGHLVRR AV T  C+  I
Sbjct:   100 DSEEVKLEEAATKV-QAALRAQQAREESQNLKGITRVQAVIRGHLVRRQAVATYSCIWGI 158

Query:   104 VKMQTLVRARYARLGKEPDWKAEKDTCNSVTSKGNLVTKPNATRTSIQNLLSNRFARQLM 163
             VK+Q LVR + AR   E   + +K    + TS+    T   +T + ++N        +L+
Sbjct:   159 VKVQALVRGKKAR-SSETVAQLQKTNTETETSE----TLQGSTYSWMENPTKLSMIDKLL 213

Query:   164 ESTPKNKPIHIKCDPAKQDSAWNWLERWMPVSSAKQTLEPGSKIEHSENGKNENFASPVE 223
              S+P   P+ I+  P   +SA  WL RW  +    Q   PG  +      KN    S  +
Sbjct:   214 VSSPTTLPLKIQYSPEDPNSAKVWLGRWTQL----QVWAPGPLVV-----KNLVPKSQTK 264

Query:   224 TKIPSEVLCDSADSKSRIRE-TDVLSKIEENLITHDADKFNFQQS--QPTSVGDDLELSE 280
              +    V  +    K  +R+ T V +    +     AD    +++  + +++G   ELS+
Sbjct:   265 KRSFQAVEAEKGKLKRGVRKPTGVSTTANSSTSRSTADNEKPKRTVRKASTLGK--ELSK 322

Query:   281 PENNGTSDVNEISIETDSHQSQI-VQSDAPSQQELK-SLSN---KPEMESEPPKRSMKRF 335
              EN+ +   +  S       S + V+ + P     K SLSN   K   +S   K+ +   
Sbjct:   323 IENDKSKQSSRKSTSAIKEGSSVEVKDEKPRISHKKASLSNGIGKATRKSAEKKKEIADA 382

Query:   336 ASEDLETE 343
               ++L  E
Sbjct:   383 VQKELPIE 390

GO:0005516 "calmodulin binding" evidence=ISS

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0005886 "plasma membrane" evidence=IDA

TAIR|locus:2012507 IQD28 "AT1G14380" [Arabidopsis thaliana (taxid:3702)]

 Score = 216 (81.1 bits), Expect = 3.3e-14, P = 3.3e-14
 Identities = 83/323 (25%), Positives = 144/323 (44%)

Query:    30 TPVEPKTSETIIETDADDSPLD-ESVVIVIQAAVRGILAQRELLKLKNVVKLQAAVRGHL 88
             +P+    S+  +E+  D   ++ E   I +QA  R   A+R    LK +++LQA +RGHL
Sbjct:    71 SPINGDESKDNLESRNDLGEVELEQAAIKVQATFRAHQARRAFRTLKGIIRLQAVIRGHL 130

Query:    89 VRRHAVGTLRCVQAIVKMQTLVRARYARLGKEPDWKAEKDTCNSVTSKGNLVTKPNATRT 148
             VRR A+ T  C+  IVK Q LVR + AR     D   +    +   S   ++   ++T +
Sbjct:   131 VRRQAIATYSCIWGIVKFQALVRGQKAR---SSDIAIQFQKKHMEASDSEVLQ--SSTCS 185

Query:   149 SIQNLLSNRFARQLMESTPKNKPIHIKCDPAKQDSAWNWLERW--MPVSSAKQTLEPGSK 206
              + N     F  +L+ S+P   P+ I+  P + +SA  WLERW  + V S+   + P  +
Sbjct:   186 WMDNPTKFVFVDKLLASSPTALPLKIQYGPEEPNSAKVWLERWTQLQVWSSGSRV-PRIE 244

Query:   207 IEHSENGKNENFASPVET--KIPSEVLCDSADSKSRIRETDVLSKIEENLITHDADKFNF 264
             I  S++ K  N+ + VE   K P   +   + + S    +   +  E N    +  K + 
Sbjct:   245 IPKSQS-KKRNYQAVVEAEKKRPKRSIKKPSGTTSGTGPSRFTA--ERNKPKRNVRKAST 301

Query:   265 QQSQPTSVGDDL--ELSEPENNGTSDVNEISIETDSHQSQIVQSDAPSQQELKSLSNKPE 322
                 P     D     S    +G+ + + + I+ +     + +S       L + S K  
Sbjct:   302 LSKDPLRNESDKANHNSRKSRSGSKEGSPLEIKDEKPSPSLKRSS------LSNGSKKAT 355

Query:   323 MESEPPKRSMKRFASEDLETEGK 345
             + S   K+     +S  ++ EGK
Sbjct:   356 LRSAEKKKKDIPDSSVQIQPEGK 378

GO:0005516 "calmodulin binding" evidence=ISS

GO:0005737 "cytoplasm" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0005886 "plasma membrane" evidence=IDA

TAIR|locus:2090409 IQD5 "AT3G22190" [Arabidopsis thaliana (taxid:3702)]

 Score = 177 (67.4 bits), Expect = 2.3e-12, Sum P(2) = 2.3e-12
 Identities = 39/84 (46%), Positives = 52/84 (61%)

Query:    46 DDSPLDESVVIVIQAAVRGILAQRELLKLKNVVKLQAAVRGHLVRRHAVGTLRCVQAIVK 105
             D+   +      IQ A RG LA+R L  LK +V+LQA VRGH VR+ A  TLRC+QA+V+
Sbjct:    82 DEQSRENRAATRIQTAYRGFLARRALRALKGLVRLQALVRGHAVRKQAAVTLRCMQALVR 141

Query:   106 MQTLVRARYARLGKEPDWKAEKDT 129
             +Q  VRAR  RL  E + +  + T
Sbjct:   142 VQARVRARRVRLALELESETSQQT 165

GO:0005516 "calmodulin binding" evidence=ISS

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0005886 "plasma membrane" evidence=IDA

TAIR|locus:2081775 IQD20 "AT3G51380" [Arabidopsis thaliana (taxid:3702)]

 Score = 152 (58.6 bits), Expect = 6.8e-10, P = 6.8e-10
 Identities = 35/75 (46%), Positives = 47/75 (62%)

Query:    39 TIIETDADDSPLDESVVIVIQAAVRGILAQRELLKLKNVVKLQAAVRGHLVRRHAVGTLR 98
             TII + A ++  +E   + IQA  RG LA+R    LK++VKLQA  RG LVRR A   L 
Sbjct:    24 TIIRSSAPETTREEIAAVKIQAFFRGHLARRAFKALKSLVKLQAVARGVLVRRQARIALH 83

Query:    99 CVQAIVKMQTLVRAR 113
             C+ A+ ++Q  VRAR
Sbjct:    84 CMHALARLQVRVRAR 98

GO:0005516 "calmodulin binding" evidence=ISS

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2134628 iqd17 "AT4G00820" [Arabidopsis thaliana (taxid:3702)]

 Score = 161 (61.7 bits), Expect = 2.9e-09, Sum P(2) = 2.9e-09
 Identities = 39/87 (44%), Positives = 55/87 (63%)

Query:    51 DESVVIVIQAAVRGILAQRELLKLKNVVKLQAAVRGHLVRRHAVGTLRCVQAIVKMQTLV 110
             ++   +VIQ   RG LA+R L  LK +VKLQA VRGH VR+ A  TLRC+QA+V++Q+ V
Sbjct:   131 EDYAAVVIQTGFRGYLARRALRALKGLVKLQALVRGHNVRKQAKMTLRCMQALVRVQSRV 190

Query:   111 RARYARLGKEPDWK-AEKDTCNSVTSK 136
               +  RL  +   K A  DT + + S+
Sbjct:   191 LDQRKRLSHDGSRKSAFSDTQSVLESR 217

GO:0005516 "calmodulin binding" evidence=ISS

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2057459 IQD6 "AT2G26180" [Arabidopsis thaliana (taxid:3702)]

 Score = 166 (63.5 bits), Expect = 4.1e-09, P = 4.1e-09
 Identities = 37/70 (52%), Positives = 47/70 (67%)

Query:    51 DESVVIVIQAAVRGILAQRELLKLKNVVKLQAAVRGHLVRRHAVGTLRCVQAIVKMQTLV 110
             +E   I IQ A RG LA+R L  LK +V+LQA VRG  VR+ A  TLRC+QA+V++Q  V
Sbjct:    83 EEWAAIRIQTAFRGFLARRALRALKGIVRLQALVRGRQVRKQAAVTLRCMQALVRVQARV 142

Query:   111 RARYARLGKE 120
             RAR  R+  E
Sbjct:   143 RARRVRMTVE 152

GO:0005516 "calmodulin binding" evidence=ISS

GO:0005634 "nucleus" evidence=ISM

TAIR|locus:2130200 IQD19 "AT4G14750" [Arabidopsis thaliana (taxid:3702)]

 Score = 162 (62.1 bits), Expect = 9.6e-09, P = 9.6e-09
 Identities = 37/90 (41%), Positives = 52/90 (57%)

Query:    28 FPTPVEPKTSETIIETDADDSPLDESVVIVIQAAVRGILAQRELLKLKNVVKLQAAVRGH 87
             F   +     E I    A++  ++E   I IQA  R  LA++ L  LK +VKLQA VRGH
Sbjct:    83 FVVEIVDNEDEQIKNVSAEE--IEEFAAIKIQACYRSHLARKALRALKGLVKLQALVRGH 140

Query:    88 LVRRHAVGTLRCVQAIVKMQTLVRARYARL 117
             LVR+ A  TLRC+QA++ +Q   R +  R+
Sbjct:   141 LVRKQATATLRCMQALITLQAKAREQRIRM 170

GO:0005516 "calmodulin binding" evidence=ISS

GO:0005634 "nucleus" evidence=ISM

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: eugene3.00020229 hypothetical protein (815 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	626
PF00612	21	IQ: IQ calmodulin-binding motif; InterPro: IPR0000	97.78
KOG0160	862	consensus Myosin class V heavy chain [Cytoskeleton	97.61
KOG0160	862	consensus Myosin class V heavy chain [Cytoskeleton	97.43
smart00015	26	IQ Short calmodulin-binding motif containing conse	97.26
PTZ00014	821	myosin-A; Provisional	96.73
KOG0520	975	consensus Uncharacterized conserved protein, conta	96.55
KOG0164	1001	consensus Myosin class I heavy chain [Cytoskeleton	96.47
PF00612	21	IQ: IQ calmodulin-binding motif; InterPro: IPR0000	95.37
KOG2128	1401	consensus Ras GTPase-activating protein family - I	94.98
COG5022	1463	Myosin heavy chain [Cytoskeleton]	94.69
smart00015	26	IQ Short calmodulin-binding motif containing conse	93.37
PTZ00014	821	myosin-A; Provisional	93.28
KOG0520	975	consensus Uncharacterized conserved protein, conta	87.42
KOG2128	1401	consensus Ras GTPase-activating protein family - I	85.67
KOG4427	1096	consensus E3 ubiquitin protein ligase [Posttransla	85.05

>PF00612 IQ: IQ calmodulin-binding motif; InterPro: IPR000048 The IQ motif is an extremely basic unit of about 23 amino acids, whose conserved core usually fits the consensus A-x(3)-I-Q-x(2)-F-R-x(4)-K-K

Probab=97.78  E-value=2.8e-05  Score=51.36  Aligned_cols=21  Identities=33%  Similarity=0.482  Sum_probs=18.8

Q ss_pred             hHHHHHHHHHHHHHHHHHHHH
Q 042390           52 ESVVIVIQAAVRGILAQRELL   72 (626)
Q Consensus        52 E~AAI~IQSAfRGyLARR~lr   72 (626)
                      ..||+.||++||||++|+.|+
T Consensus         1 ~~aai~iQ~~~R~~~~Rk~~k   21 (21)
T PF00612_consen    1 RKAAIIIQSYWRGYLARKRYK   21 (21)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHHHhcC
Confidence            368999999999999999885

The IQ motif, which can be present in one or more copies, serves as a binding site for different EF-hand proteins including the essential and regulatory myosin light chains, calmodulin (CaM), and CaM-like proteins [, ].Many IQ motifs are protein kinase C (PKC) phosphorylation sites [, ]. Resolution of the 3D structure of scallop myosin has shown that the IQ motif forms a basic amphipathic helix []. Some proteins known to contain an IQ motif are listed below: A number of conventional and unconventional myosins. Neuromodulin (GAP-43). This protein is associated with nerve growth. It is a major component of the motile "growth cones" that form the tips of elongating axons. Neurogranin (NG/p17). Acts as a "third messenger" substrate of protein kinase C-mediated molecular cascades during synaptic development and remodeling. Sperm surface protein Sp17. Ras GTPase-activating-like protein IQGAP1. IQGAP1 contains 4 IQ motifs. This entry covers the entire IQ motif.; GO: 0005515 protein binding; PDB: 2DFS_A 2IX7_C 1OE9_A 1W7J_A 1W7I_A 1KQM_A 1KK7_A 1WDC_A 1DFL_A 1B7T_A ....

>KOG0160 consensus Myosin class V heavy chain [Cytoskeleton]

Probab=97.61  E-value=0.00011  Score=85.68  Aligned_cols=67  Identities=30%  Similarity=0.402  Sum_probs=51.6

Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHHhh-hhHHHHHHHHhhHHHHHHHhhHHHHHHHHHHHHHHHHHHHhhcCCC
Q 042390           50 LDESVVIVIQAAVRGILAQRELLKL-KNVVKLQAAVRGHLVRRHAVGTLRCVQAIVKMQTLVRARYARLGKE  120 (626)
Q Consensus        50 reE~AAI~IQSAfRGyLARR~lraL-KgiVRLQAlIRG~LVRRQaa~tLr~mqAIVkIQA~IRgrrARrs~e  120 (626)
                      ....+++.||..+|||+.|+.|..+ ++++.||+++||+++|+..   . ...+++.+|+.+|++..|+.+.
T Consensus       671 vl~~~~~~iq~~~r~~~~r~~f~~~r~~~~~~Q~~~rG~~~r~~~---~-~~~aai~~q~~~r~~~~r~~y~  738 (862)
T KOG0160|consen  671 VLSAAKVLIQRQIRGYLARKKFLQLRSAVIIIQAYSRGVLARRET---E-REAAAIGIQKECRSYLNRRRYR  738 (862)
T ss_pred             HHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHhh---H-HHHHHHHhHHHHHHHHHHHHHH
Confidence            3456778899999999999999866 4788899999999999822   2 3446666777777777777655

>KOG0160 consensus Myosin class V heavy chain [Cytoskeleton]

Probab=97.43  E-value=0.00032  Score=82.01  Aligned_cols=67  Identities=36%  Similarity=0.364  Sum_probs=58.9

Q ss_pred             CchhhHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHhhHHHHHHHhhHHHHHHHHHHHHHHHHHHHhhc
Q 042390           48 SPLDESVVIVIQAAVRGILAQRELLKLKNVVKLQAAVRGHLVRRHAVGTLRCVQAIVKMQTLVRARYARL  117 (626)
Q Consensus        48 ~~reE~AAI~IQSAfRGyLARR~lraLKgiVRLQAlIRG~LVRRQaa~tLr~mqAIVkIQA~IRgrrARr  117 (626)
                      +.+...+++.||+.+||+++|+......+++.+|..+|+++.|++|...   ..+++.+|+.+|+.++|.
T Consensus       692 f~~~r~~~~~~Q~~~rG~~~r~~~~~~~aai~~q~~~r~~~~r~~y~~~---~~~~~~~qs~~r~~~~r~  758 (862)
T KOG0160|consen  692 FLQLRSAVIIIQAYSRGVLARRETEREAAAIGIQKECRSYLNRRRYRAL---IPASITIQSGVRAMLARN  758 (862)
T ss_pred             HHHHHHHHHHHhhhhhHHHHHHhhHHHHHHHHhHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHhcc
Confidence            5678899999999999999998444556889999999999999999655   458999999999999998

>smart00015 IQ Short calmodulin-binding motif containing conserved Ile and Gln residues

Probab=97.26  E-value=0.00028  Score=48.68  Aligned_cols=22  Identities=41%  Similarity=0.477  Sum_probs=19.7

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHH
Q 042390           51 DESVVIVIQAAVRGILAQRELL   72 (626)
Q Consensus        51 eE~AAI~IQSAfRGyLARR~lr   72 (626)
                      ...||+.||+.||||++|+.|+
T Consensus         2 ~~~aa~~IQa~~Rg~~~r~~y~   23 (26)
T smart00015        2 LTRAAIIIQAAWRGYLARKRYK   23 (26)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhh
Confidence            5689999999999999999984

Calmodulin-binding motif.

>PTZ00014 myosin-A; Provisional

Probab=96.73  E-value=0.002  Score=75.45  Aligned_cols=40  Identities=35%  Similarity=0.464  Sum_probs=33.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHhh-hhHHHHHHHHhhHHHHHHH
Q 042390           54 VVIVIQAAVRGILAQRELLKL-KNVVKLQAAVRGHLVRRHA   93 (626)
Q Consensus        54 AAI~IQSAfRGyLARR~lraL-KgiVRLQAlIRG~LVRRQa   93 (626)
                      .|+.||++||||++|+.|..+ .++++||+.+||+++++..
T Consensus       779 ~~~~iq~~~r~~~~r~~~~~~~~~~~~iQ~~~R~~l~~~~~  819 (821)
T PTZ00014        779 LVSVLEALILKIKKKRKVRKNIKSLVRIQAHLRRHLVIAEI  819 (821)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence            678899999999999988754 5788889999998888764

>KOG0520 consensus Uncharacterized conserved protein, contains IPT/TIG domain [Function unknown]

Probab=96.55  E-value=0.0017  Score=76.79  Aligned_cols=74  Identities=28%  Similarity=0.267  Sum_probs=57.8

Q ss_pred             CCchhhHHHHHHHHHHHHHHHHHHHHhhh-hHHHHHHHHhhHHHHHHHhhHHHH-------HHHHHHHHHHHHHHHhhcC
Q 042390           47 DSPLDESVVIVIQAAVRGILAQRELLKLK-NVVKLQAAVRGHLVRRHAVGTLRC-------VQAIVKMQTLVRARYARLG  118 (626)
Q Consensus        47 e~~reE~AAI~IQSAfRGyLARR~lraLK-giVRLQAlIRG~LVRRQaa~tLr~-------mqAIVkIQA~IRgrrARrs  118 (626)
                      .....-.||..||..||||+.|+.|..++ -+|+||+.+||+.+|++|......       +.++-++|+.+|+++.|..
T Consensus       805 ~~r~~~~aa~~iq~~f~~yk~r~~~l~tr~p~v~iqa~~rg~q~r~dy~ki~wSv~~lek~~lrwR~k~~g~Rgfk~~~~  884 (975)
T KOG0520|consen  805 DDRSDPAAASRIQKKFRGYKQRKEFLSTRQPIVKIQAAVRGYQVRKDYRKITWSVGVLEKLILRWRRKGKGFRGFKGRAL  884 (975)
T ss_pred             ccccchhHHHHhhhhhhhHHhhhhhcccCCccccchhhhhchhHhhhhheechhhhHHHHHHHHHHHhhhhhcccccccc
Confidence            44556779999999999999999998765 699999999999999999765543       2344556777777766665


Q ss_pred             CC
Q 042390          119 KE  120 (626)
Q Consensus       119 ~e  120 (626)
                      .+
T Consensus       885 ~e  886 (975)
T KOG0520|consen  885 FE  886 (975)
T ss_pred             hh
Confidence            44

>KOG0164 consensus Myosin class I heavy chain [Cytoskeleton]

Probab=96.47  E-value=0.0041  Score=71.71  Aligned_cols=62  Identities=19%  Similarity=0.161  Sum_probs=47.1

Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHhhHHHHHHHhhHHHHHHHHHHHHHHHHHHHhhcCCCC
Q 042390           50 LDESVVIVIQAAVRGILAQRELLKLKNVVKLQAAVRGHLVRRHAVGTLRCVQAIVKMQTLVRARYARLGKEP  121 (626)
Q Consensus        50 reE~AAI~IQSAfRGyLARR~lraLKgiVRLQAlIRG~LVRRQaa~tLr~mqAIVkIQA~IRgrrARrs~e~  121 (626)
                      +.-.-|+.||++||||++|.+|+.++++..|=..+|.+.+|-          .+..||.++|+.+.++.+..
T Consensus       694 ~l~~lvtllQK~~RG~~~R~ry~rmka~~~ii~wyR~~K~ks----------~v~el~~~~rg~k~~r~ygk  755 (1001)
T KOG0164|consen  694 RLPSLVTLLQKAWRGWLARQRYRRMKASATIIRWYRRYKLKS----------YVQELQRRFRGAKQMRDYGK  755 (1001)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----------HHHHHHHHHHhhhhccccCC
Confidence            344568999999999999999999987655544667554443          34458899999999988773

>PF00612 IQ: IQ calmodulin-binding motif; InterPro: IPR000048 The IQ motif is an extremely basic unit of about 23 amino acids, whose conserved core usually fits the consensus A-x(3)-I-Q-x(2)-F-R-x(4)-K-K

Probab=95.37  E-value=0.018  Score=38.06  Aligned_cols=19  Identities=32%  Similarity=0.436  Sum_probs=16.9

Q ss_pred             hhHHHHHHHHhhHHHHHHH
Q 042390           75 KNVVKLQAAVRGHLVRRHA   93 (626)
Q Consensus        75 KgiVRLQAlIRG~LVRRQa   93 (626)
                      ++++.||+.+||+++|++|
T Consensus         2 ~aai~iQ~~~R~~~~Rk~~   20 (21)
T PF00612_consen    2 KAAIIIQSYWRGYLARKRY   20 (21)
T ss_dssp             HHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhc
Confidence            4788999999999999987

The IQ motif, which can be present in one or more copies, serves as a binding site for different EF-hand proteins including the essential and regulatory myosin light chains, calmodulin (CaM), and CaM-like proteins [, ].Many IQ motifs are protein kinase C (PKC) phosphorylation sites [, ]. Resolution of the 3D structure of scallop myosin has shown that the IQ motif forms a basic amphipathic helix []. Some proteins known to contain an IQ motif are listed below: A number of conventional and unconventional myosins. Neuromodulin (GAP-43). This protein is associated with nerve growth. It is a major component of the motile "growth cones" that form the tips of elongating axons. Neurogranin (NG/p17). Acts as a "third messenger" substrate of protein kinase C-mediated molecular cascades during synaptic development and remodeling. Sperm surface protein Sp17. Ras GTPase-activating-like protein IQGAP1. IQGAP1 contains 4 IQ motifs. This entry covers the entire IQ motif.; GO: 0005515 protein binding; PDB: 2DFS_A 2IX7_C 1OE9_A 1W7J_A 1W7I_A 1KQM_A 1KK7_A 1WDC_A 1DFL_A 1B7T_A ....

>KOG2128 consensus Ras GTPase-activating protein family - IQGAP [Signal transduction mechanisms]

Probab=94.98  E-value=0.052  Score=66.42  Aligned_cols=75  Identities=35%  Similarity=0.385  Sum_probs=59.8

Q ss_pred             CCCch-hhHHHHHHHHHHHHHHH---HHHHH--hhhhHHHHHHHHhhHHHHHHHhhHH----HHHHHHHHHHHHHHHHHh
Q 042390           46 DDSPL-DESVVIVIQAAVRGILA---QRELL--KLKNVVKLQAAVRGHLVRRHAVGTL----RCVQAIVKMQTLVRARYA  115 (626)
Q Consensus        46 ve~~r-eE~AAI~IQSAfRGyLA---RR~lr--aLKgiVRLQAlIRG~LVRRQaa~tL----r~mqAIVkIQA~IRgrrA  115 (626)
                      ++.++ .......||++||||+.   |..+.  ..+.++.+|++.||+++|+.+...+    .|+.+++++|+.+|+.+.
T Consensus       558 ~~fl~~~~P~~~diq~~vr~~~~~~~~~~~~~~~~~evv~~qs~~R~~lsrk~~~~~~q~~~~~~~~~i~iqs~~r~f~~  637 (1401)
T KOG2128|consen  558 LDFLKKQTPFVVDIQALVRGILQYIPRDVYLDSAKKEVVKFQSLTRGALSRKKYSRKLQYFKDNMTKIIKIQSKIRKFPN  637 (1401)
T ss_pred             hhHHHhcCchHHHHHHHHHHHhhhchHHHHHHHhhHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhhhHHHHHHHHHhccc
Confidence            34443 67789999999999995   11221  4567999999999999999987554    467899999999999999


Q ss_pred             hcCCC
Q 042390          116 RLGKE  120 (626)
Q Consensus       116 Rrs~e  120 (626)
                      |..+.
T Consensus       638 r~~y~  642 (1401)
T KOG2128|consen  638 RKDYK  642 (1401)
T ss_pred             chHHH
Confidence            98775

>COG5022 Myosin heavy chain [Cytoskeleton]

Probab=94.69  E-value=0.062  Score=66.06  Aligned_cols=44  Identities=32%  Similarity=0.435  Sum_probs=31.2

Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHH-hhhhHHHHHHHHhhHHHHHHH
Q 042390           50 LDESVVIVIQAAVRGILAQRELL-KLKNVVKLQAAVRGHLVRRHA   93 (626)
Q Consensus        50 reE~AAI~IQSAfRGyLARR~lr-aLKgiVRLQAlIRG~LVRRQa   93 (626)
                      .....+++||++|||++.||+|. +++.+..+|...+|..+|+..
T Consensus       743 ~~~~~~~~iq~aiR~~~~rrr~~~~~k~i~~~~~~~~~~~~~~~~  787 (1463)
T COG5022         743 KLDNIATRIQRAIRGRYLRRRYLQALKRIKKIQVIQHGFRLRRLV  787 (1463)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhhhc
Confidence            34568999999999999999985 445555555555555555443

>smart00015 IQ Short calmodulin-binding motif containing conserved Ile and Gln residues

Probab=93.37  E-value=0.082  Score=36.47  Aligned_cols=20  Identities=35%  Similarity=0.483  Sum_probs=17.5

Q ss_pred             hhhHHHHHHHHhhHHHHHHH
Q 042390           74 LKNVVKLQAAVRGHLVRRHA   93 (626)
Q Consensus        74 LKgiVRLQAlIRG~LVRRQa   93 (626)
                      .++++.||+.+||+++|++|
T Consensus         3 ~~aa~~IQa~~Rg~~~r~~y   22 (26)
T smart00015        3 TRAAIIIQAAWRGYLARKRY   22 (26)
T ss_pred             HHHHHHHHHHHHHHHHHHhh
Confidence            35788999999999999988

Calmodulin-binding motif.

>PTZ00014 myosin-A; Provisional

Probab=93.28  E-value=0.2  Score=59.27  Aligned_cols=40  Identities=18%  Similarity=0.207  Sum_probs=35.0

Q ss_pred             hHHHHHHHHhhHHHHHHHhhHHHHHHHHHHHHHHHHHHHhhcC
Q 042390           76 NVVKLQAAVRGHLVRRHAVGTLRCVQAIVKMQTLVRARYARLG  118 (626)
Q Consensus        76 giVRLQAlIRG~LVRRQaa~tLr~mqAIVkIQA~IRgrrARrs  118 (626)
                      .++.||+.+||++.|++|...   .++++.||+.+|++++++.
T Consensus       779 ~~~~iq~~~r~~~~r~~~~~~---~~~~~~iQ~~~R~~l~~~~  818 (821)
T PTZ00014        779 LVSVLEALILKIKKKRKVRKN---IKSLVRIQAHLRRHLVIAE  818 (821)
T ss_pred             HHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHhc
Confidence            467899999999999999644   5699999999999999875

>KOG0520 consensus Uncharacterized conserved protein, contains IPT/TIG domain [Function unknown]

Probab=87.42  E-value=0.74  Score=55.44  Aligned_cols=78  Identities=23%  Similarity=0.219  Sum_probs=60.0

Q ss_pred             eccCCCCCchhhHHHHHHHHHHHHHHHHHHH-Hhhh-------------------------------hHHHHHHHHhhHH
Q 042390           41 IETDADDSPLDESVVIVIQAAVRGILAQREL-LKLK-------------------------------NVVKLQAAVRGHL   88 (626)
Q Consensus        41 v~~~~ve~~reE~AAI~IQSAfRGyLARR~l-raLK-------------------------------giVRLQAlIRG~L   88 (626)
                      +.+--+.......||.+||.+||..--++.. +.+.                               ++.++|.-+|||+
T Consensus       745 l~Dtl~avrdAa~aa~r~q~vfr~~~~~~~~a~~i~~~~~~~i~~~~~~~m~~~~a~~~~~~r~~~~aa~~iq~~f~~yk  824 (975)
T KOG0520|consen  745 LKDTLAAVRDAAQAAARIQAVFRAQSFQKKQAREIMDATKEQISEELAVSMKASSAFSMCDDRSDPAAASRIQKKFRGYK  824 (975)
T ss_pred             cccccccccchHHHHHhhhhhhhhhhhhhhhHHHHHhhcchhhhhhhhhhhhcccchhcCccccchhHHHHhhhhhhhHH
Confidence            3444555666788999999999987666432 1100                               3678899999999


Q ss_pred             HHHHHhhHHHHHHHHHHHHHHHHHHHhhcCCCC
Q 042390           89 VRRHAVGTLRCVQAIVKMQTLVRARYARLGKEP  121 (626)
Q Consensus        89 VRRQaa~tLr~mqAIVkIQA~IRgrrARrs~e~  121 (626)
                      .|+.+..+.   +-+|+||+.+|++.+|+.|..
T Consensus       825 ~r~~~l~tr---~p~v~iqa~~rg~q~r~dy~k  854 (975)
T KOG0520|consen  825 QRKEFLSTR---QPIVKIQAAVRGYQVRKDYRK  854 (975)
T ss_pred             hhhhhcccC---CccccchhhhhchhHhhhhhe
Confidence            999997554   689999999999999999884

>KOG2128 consensus Ras GTPase-activating protein family - IQGAP [Signal transduction mechanisms]

Probab=85.67  E-value=1.1  Score=55.62  Aligned_cols=62  Identities=31%  Similarity=0.338  Sum_probs=48.2

Q ss_pred             HHHHHHHHHHHHHHHHHhhh--------hHHHHHHHHhhHHHHHHHhhHHH----HHHHHHHHHHHHHHHHhhcCCC
Q 042390           56 IVIQAAVRGILAQRELLKLK--------NVVKLQAAVRGHLVRRHAVGTLR----CVQAIVKMQTLVRARYARLGKE  120 (626)
Q Consensus        56 I~IQSAfRGyLARR~lraLK--------giVRLQAlIRG~LVRRQaa~tLr----~mqAIVkIQA~IRgrrARrs~e  120 (626)
                      .+||+-.|||..|..++...        .++.+|+++||+++   |.....    ...-++++|+..|+.++|..+.
T Consensus       539 ~~~qa~~rg~~~r~~~~~~~~fl~~~~P~~~diq~~vr~~~~---~~~~~~~~~~~~~evv~~qs~~R~~lsrk~~~  612 (1401)
T KOG2128|consen  539 LRIQASERGFSTRNKFRSRLDFLKKQTPFVVDIQALVRGILQ---YIPRDVYLDSAKKEVVKFQSLTRGALSRKKYS  612 (1401)
T ss_pred             hhhhhhccccchHHHHHhhhhHHHhcCchHHHHHHHHHHHhh---hchHHHHHHHhhHHHHHHHHHHHHHHHHhhHH
Confidence            34599999999999887533        47889999999997   332222    2468899999999999998765

>KOG4427 consensus E3 ubiquitin protein ligase [Posttranslational modification, protein turnover, chaperones]

Probab=85.05  E-value=3.6  Score=48.91  Aligned_cols=24  Identities=21%  Similarity=0.328  Sum_probs=21.4

Q ss_pred             chhhHHHHHHHHHHHHHHHHHHHH
Q 042390           49 PLDESVVIVIQAAVRGILAQRELL   72 (626)
Q Consensus        49 ~reE~AAI~IQSAfRGyLARR~lr   72 (626)
                      .++++||+.||+++|||++|+++.
T Consensus        27 rrr~~aa~~iq~~lrsyl~Rkk~~   50 (1096)
T KOG4427|consen   27 RRREAAALFIQRVLRSYLVRKKAQ   50 (1096)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHH
Confidence            466789999999999999999986

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	626
2ix7_C	58	Myosin-5A; contractIle protein/metal binding, acti	3e-10
2ix7_C	58	Myosin-5A; contractIle protein/metal binding, acti	3e-05
2dfs_A	1080	Myosin-5A; myosin-V, inhibited state, cryoelectron	3e-07
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	5e-07
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-05
2ycu_A	995	Non muscle myosin 2C, alpha-actinin; motor protein	4e-05
1kk8_A	837	Myosin heavy chain, striated muscle; actin-detache	1e-04
1i84_S	1184	Smooth muscle myosin heavy chain; muscle protein,	8e-04

>2ix7_C Myosin-5A; contractIle protein/metal binding, actin-binding, UBL conjugation, Ca2+ regulation, myosin, calcium, IQ motif, acetylation; 2.5A {Mus musculus} Length = 58

 Score = 54.9 bits (133), Expect = 3e-10
 Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 2/49 (4%)

Query: 55  VIVIQAAVRGILAQRELLKLKN-VVKLQAAVRGHLVRRHAVGTLRCVQA 102
            I IQ  +RG L ++  L ++   + +Q  VRG+  R +A   LR  +A
Sbjct: 8   CIRIQKTIRGWLLRKRYLCMQRAAITVQRYVRGYQARCYAK-FLRRTKA 55

>2ix7_C Myosin-5A; contractIle protein/metal binding, actin-binding, UBL conjugation, Ca2+ regulation, myosin, calcium, IQ motif, acetylation; 2.5A {Mus musculus} Length = 58

 Score = 41.0 bits (97), Expect = 3e-05
 Identities = 12/40 (30%), Positives = 21/40 (52%), Gaps = 3/40 (7%)

Query: 77  VVKLQAAVRGHLVRRHAVGTLRCVQAIVKMQTLVRARYAR 116
            +++Q  +RG L+R+     L   +A + +Q  VR   AR
Sbjct: 8   CIRIQKTIRGWLLRKRY---LCMQRAAITVQRYVRGYQAR 44

>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus} Length = 1080

 Score = 52.8 bits (127), Expect = 3e-07
 Identities = 19/66 (28%), Positives = 34/66 (51%), Gaps = 2/66 (3%)

Query: 52  ESVVIVIQAAVRGILAQRELLKLKN-VVKLQAAVRGHLVRRHAVGTLRCVQAIVKMQTLV 110
            +  I IQ  +RG L +++ ++++   + +Q  VRGH  R +A   LR  +A + +Q   
Sbjct: 768 RAACIRIQKTIRGWLMRKKYMRMRRAAITIQRYVRGHQARCYA-TFLRRTRAAIIIQKFQ 826

Query: 111 RARYAR 116
           R    R
Sbjct: 827 RMYVVR 832

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 52.2 bits (124), Expect = 5e-07
 Identities = 70/451 (15%), Positives = 129/451 (28%), Gaps = 113/451 (25%)

Query: 8   FKI--ITCGSDSAGNDDLD-VSEFPTPVEPKTSETIIETDADDSPLDESVVIVIQAAVRG 64
           FKI  +   + ++    L+ + +    ++P  +     +      +       IQA +R 
Sbjct: 182 FKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHS-----IQAELRR 236

Query: 65  ILAQRE----LLKLKNV--VKLQAAVRGHLVRRHAVGTLRCVQAIVKMQTLVRARYARLG 118
           +L  +     LL L NV   K   A             L C       + L+  R+ ++ 
Sbjct: 237 LLKSKPYENCLLVLLNVQNAKAWNAF-----------NLSC-------KILLTTRFKQVT 278

Query: 119 KEPDWKAEKDTCNSVTSKGNLVTKPNATRTSIQNLLSNRFARQLMESTP----KNKPIHI 174
                           S    +T         ++LL   +     +  P       P  +
Sbjct: 279 DFLSAATTTHISLDHHSMT--LTPDEV-----KSLLLK-YLDCRPQDLPREVLTTNPRRL 330

Query: 175 KCDPAK-QDSAWNWLERWMPVSSAKQT---------LEPGSKIEHSENGKNENFAS---- 220
                  +D    W + W  V+  K T         LEP    E+ +      F      
Sbjct: 331 SIIAESIRDGLATW-DNWKHVNCDKLTTIIESSLNVLEPA---EYRKM-----FDRLSVF 381

Query: 221 PVETKIPSEVLCDS-ADSKSRIRETDVLSKIEE-NLITHDADKFNFQQSQPTSVGD-DLE 277
           P    IP+ +L     D         V++K+ + +L+     +         S+    LE
Sbjct: 382 PPSAHIPTILLSLIWFDVIKSDVM-VVVNKLHKYSLVEKQPKESTI------SIPSIYLE 434

Query: 278 LSEPENNGTSDVNEISIETDSHQSQIVQSDAPSQQELKSLSNKPEMESEPPKRS------ 331
           L     N          E   H+S +   + P   +   L         PP         
Sbjct: 435 LKVKLEN----------EYALHRSIVDHYNIPKTFDSDDLI--------PPYLDQYFYSH 476

Query: 332 ----MKRFASEDLETEGKK----FVFGSRK--ASNPAFVVAHSKFEELSSSANSGKSISS 381
               +K     +  T  +     F F  +K    + A+  + S    L         I  
Sbjct: 477 IGHHLKNIEHPERMTLFRMVFLDFRFLEQKIRHDSTAWNASGSILNTLQQLKFYKPYICD 536

Query: 382 QHQDVS--VDSNANNISSGANSLTRTKNLSI 410
                   V++  + +     +L  +K   +
Sbjct: 537 NDPKYERLVNAILDFLPKIEENLICSKYTDL 567

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 46.8 bits (110), Expect = 2e-05
 Identities = 82/590 (13%), Positives = 168/590 (28%), Gaps = 200/590 (33%)

Query: 22  DLDVSEFPTPVEPKTSETIIETDADD--SPLDESVVIVIQAAVRGILAQRELLKLKNVVK 79
           D +  E          + I+    D      D      +Q   + IL++ E+    +++ 
Sbjct: 8   DFETGE-----HQYQYKDILSVFEDAFVDNFD---CKDVQDMPKSILSKEEI---DHIIM 56

Query: 80  LQAAVRGHLVRRHAVGTLRCVQA-IVK--MQTLVRARY----ARLGKEP--------DWK 124
            + AV G    R    TL   Q  +V+  ++ ++R  Y    + +  E          + 
Sbjct: 57  SKDAVSG--TLR-LFWTLLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYI 113

Query: 125 AEKD---TCNSVTSKGNLVTKP---NATRTSIQNLLSNR---------FARQ-LMESTPK 168
            ++D     N V +K N V++       R ++  L   +           +  +      
Sbjct: 114 EQRDRLYNDNQVFAKYN-VSRLQPYLKLRQALLELRPAKNVLIDGVLGSGKTWVALDVCL 172

Query: 169 NKPIHIKCDPAKQDSAWNWLERWMPVSSAKQTLEPGSKIEHSEN---GKNENFASPVETK 225
           +  +  K      D    WL       + K    P + +E  +      + N+ S  +  
Sbjct: 173 SYKVQCK-----MDFKIFWL-------NLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHS 220

Query: 226 IPSEVLCDSADSKSRIRETDVLSKIEENLITHD-------ADKFNFQ-----QSQPTSVG 273
              ++   S   ++ +R        E  L+           + FN        ++   V 
Sbjct: 221 SNIKLRIHSI--QAELRRLLKSKPYENCLLVLLNVQNAKAWNAFNLSCKILLTTRFKQVT 278

Query: 274 DDLELSEPENNGTSDVNEISIETDSHQSQIVQSDAPSQQELKSLSNKPEMESEPPKRSMK 333
           D L                S  T +H S    S   +  E+KSL                
Sbjct: 279 DFL----------------SAATTTHISLDHHSMTLTPDEVKSL---------------- 306

Query: 334 RFASEDLETEGKKFVFGSRKASNPAFVVAHSKFEELSSSANSGKSISSQHQDVSVDSNAN 393
                                          + ++L        + + +   +S+   A 
Sbjct: 307 -LLK-----------------------YLDCRPQDLPREV---LTTNPRR--LSI--IAE 335

Query: 394 NISSGANSLTRTKNLSIGENSVSRIQYGGSECGTELSISSTLDSPD---RYEAGNTEHEH 450
           +I  G  +    K+++   + ++ I         E S++  L+  +    ++        
Sbjct: 336 SIRDGLATWDNWKHVNC--DKLTTII--------ESSLNV-LEPAEYRKMFDR------- 377

Query: 451 SAKVSENEICDPKSLNNPDVKASDASTIPTYDASHSIV---GQPEKVDDVRNESVN-SLV 506
                        S+  P         IPT     S++        V  V N+    SLV
Sbjct: 378 ---------L---SVFPPSAH------IPT--ILLSLIWFDVIKSDVMVVVNKLHKYSLV 417

Query: 507 VIDAAAQQKPDNSAPDFHKEPDLQTGHQMYRSYRSSPEASPRSHITVPES 556
                 +++P  S         +      Y   +   E     H ++ + 
Sbjct: 418 ------EKQPKESTISIP---SI------YLELKVKLENEYALHRSIVDH 452

>2ycu_A Non muscle myosin 2C, alpha-actinin; motor protein; HET: AOV; 2.25A {Homo sapiens} PDB: 1br1_A* 1br4_A* 1br2_A* Length = 995

 Score = 45.8 bits (109), Expect = 4e-05
 Identities = 6/67 (8%), Positives = 25/67 (37%), Gaps = 5/67 (7%)

Query: 54  VVIVIQAAVRGILAQRELLKLKN----VVKLQAAVRGHLVRRHAVGTLRCVQAIVKMQTL 109
            +      V+ I  ++  L+ ++    +  +Q+ +  H   +         Q + +++ +
Sbjct: 763 YLKRANELVQWINDKQASLESRDFGDSIESVQSFMNAHKEYKKTE-KPPKGQEVSELEAI 821

Query: 110 VRARYAR 116
             +   +
Sbjct: 822 YNSLQTK 828

>1kk8_A Myosin heavy chain, striated muscle; actin-detached, mechanics of motor, contractIle PROT; HET: ADP; 2.30A {Argopecten irradians} SCOP: b.34.3.1 c.37.1.9 PDB: 1kk7_A* 1qvi_A* 1s5g_A* 1sr6_A 1b7t_A* 1kqm_A* 1kwo_A* 1l2o_A* 1dfl_A* 2w4t_C 2w4v_C 2w4w_C 1dfk_A 2ec6_A 2otg_A* 2os8_A* 2ovk_A 2ekv_A 2ekw_A 2oy6_A* ... Length = 837

 Score = 44.6 bits (106), Expect = 1e-04
 Identities = 12/43 (27%), Positives = 24/43 (55%), Gaps = 4/43 (9%)

Query: 54  VVIVIQAAVRGILAQRELLKLKN----VVKLQAAVRGHLVRRH 92
           ++ + QA +RG L ++   KL++    +  +Q  +R  LV R+
Sbjct: 781 IISMFQAHIRGYLIRKAYKKLQDQRIGLSVIQRNIRKWLVLRN 823

>1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A Length = 1184

 Score = 41.7 bits (98), Expect = 8e-04
 Identities = 12/49 (24%), Positives = 24/49 (48%)

Query: 68  QRELLKLKNVVKLQAAVRGHLVRRHAVGTLRCVQAIVKMQTLVRARYAR 116
           +R+L     ++  QA  RG+L R+      + +++I  +Q  VR+    
Sbjct: 786 ERDLKITDVIIAFQAQCRGYLARKAFAKRQQQLESIFCIQYNVRSFMNV 834

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	626
2ix7_C	58	Myosin-5A; contractIle protein/metal binding, acti	99.01
1n2d_C	48	IQ2 and IQ3 motifs from MYO2P, A class V myosin; p	98.9
2dfs_A	1080	Myosin-5A; myosin-V, inhibited state, cryoelectron	98.75
2dfs_A	1080	Myosin-5A; myosin-V, inhibited state, cryoelectron	98.74
1n2d_C	48	IQ2 and IQ3 motifs from MYO2P, A class V myosin; p	98.02
2ix7_C	58	Myosin-5A; contractIle protein/metal binding, acti	97.72
1wdc_A	64	Scallop myosin; calcium binding protein, muscle pr	97.5
2bl0_A	63	Major plasmodial myosin heavy chain; muscle protei	97.44
1kk8_A	837	Myosin heavy chain, striated muscle; actin-detache	97.28
2bl0_A	63	Major plasmodial myosin heavy chain; muscle protei	97.25
2l53_B	31	CAM, voltage-gated sodium channel type V alpha iso	97.23
1wdc_A	64	Scallop myosin; calcium binding protein, muscle pr	97.22
2kxw_B	27	Sodium channel protein type 2 subunit alpha; actio	97.13
1i84_S	1184	Smooth muscle myosin heavy chain; muscle protein,	96.6
1kk8_A	837	Myosin heavy chain, striated muscle; actin-detache	96.41
3gn4_A	148	Myosin-VI; unconventional myosin, motility, lever	95.85
1i84_S	1184	Smooth muscle myosin heavy chain; muscle protein,	95.47
4anj_A	1052	Unconventional myosin-VI, green fluorescent prote;	90.64
1w7j_A	795	Myosin VA; motor protein, unconventional myosin, m	90.63
4dck_A	168	Sodium channel protein type 5 subunit alpha; IQ-mo	88.42
3gn4_A	148	Myosin-VI; unconventional myosin, motility, lever	85.14

>2ix7_C Myosin-5A; contractIle protein/metal binding, actin-binding, UBL conjugation, Ca2+ regulation, myosin, calcium, IQ motif, acetylation; 2.5A {Mus musculus}

Probab=99.01  E-value=5.7e-10  Score=87.68  Aligned_cols=48  Identities=27%  Similarity=0.265  Sum_probs=43.3

Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHHhhh-hHHHHHHHHhhHHHHHHHhhHH
Q 042390           50 LDESVVIVIQAAVRGILAQRELLKLK-NVVKLQAAVRGHLVRRHAVGTL   97 (626)
Q Consensus        50 reE~AAI~IQSAfRGyLARR~lraLK-giVRLQAlIRG~LVRRQaa~tL   97 (626)
                      +...||+.||++||||++|+.|..++ +++.||+.+||+++|+.+....
T Consensus         3 ~~~~aai~IQ~~~Rg~~~Rk~~~~~r~aai~IQ~~~Rg~~aR~~~~~~r   51 (58)
T 2ix7_C            3 KLRAACIRIQKTIRGWLLRKRYLCMQRAAITVQRYVRGYQARCYAKFLR   51 (58)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            46789999999999999999999876 8999999999999999996543

>1n2d_C IQ2 and IQ3 motifs from MYO2P, A class V myosin; protein-peptide complex, myosin light chain, cell cycle; 2.00A {Saccharomyces cerevisiae}

Probab=98.90  E-value=2.5e-09  Score=80.94  Aligned_cols=42  Identities=24%  Similarity=0.394  Sum_probs=38.2

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHhhh---hHHHHHHHHhhHHHHHHH
Q 042390           52 ESVVIVIQAAVRGILAQRELLKLK---NVVKLQAAVRGHLVRRHA   93 (626)
Q Consensus        52 E~AAI~IQSAfRGyLARR~lraLK---giVRLQAlIRG~LVRRQa   93 (626)
                      ..||+.||++||||++|+.|..++   +++.||+.+||+++|+.|
T Consensus         3 r~a~i~iQ~~~Rg~l~R~~~~~~~~~~aai~IQ~~~Rg~~~Rk~y   47 (48)
T 1n2d_C            3 SQAIKYLQNNIKGFIIRQRVNDEMKVNCATLLQAAYRGHSIRANV   47 (48)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHhh
Confidence            568999999999999999997654   899999999999999987

>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus}

Probab=98.75  E-value=1.2e-08  Score=118.73  Aligned_cols=68  Identities=28%  Similarity=0.413  Sum_probs=59.8

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHhhh-hHHHHHHHHhhHHHHHHHhhHHHHHHHHHHHHHHHHHHHhhcCCC
Q 042390           52 ESVVIVIQAAVRGILAQRELLKLK-NVVKLQAAVRGHLVRRHAVGTLRCVQAIVKMQTLVRARYARLGKE  120 (626)
Q Consensus        52 E~AAI~IQSAfRGyLARR~lraLK-giVRLQAlIRG~LVRRQaa~tLr~mqAIVkIQA~IRgrrARrs~e  120 (626)
                      ..||+.||++||||++|++|+.++ +++.||+.+||+++|+++.. ++...++++||+.+|++++|+.+.
T Consensus       768 ~~aa~~IQa~~Rg~l~Rk~~~~~r~aai~IQ~~~Rg~~aR~~~~~-lr~~~AAi~IQs~~Rg~~~Rk~y~  836 (1080)
T 2dfs_A          768 RAACIRIQKTIRGWLMRKKYMRMRRAAITIQRYVRGHQARCYATF-LRRTRAAIIIQKFQRMYVVRKRYQ  836 (1080)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhhcccc-cccchhHHHHHHHHhhHHHHHHHH
Confidence            579999999999999999998765 78999999999999999864 456788999999999999998765

>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus}

Probab=98.74  E-value=1.1e-08  Score=119.25  Aligned_cols=66  Identities=26%  Similarity=0.234  Sum_probs=39.5

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHhh---hhHHHHHHHHhhHHHHHHHhhHHHHHHHHHHHHHHHHHHHhhcCCC
Q 042390           52 ESVVIVIQAAVRGILAQRELLKL---KNVVKLQAAVRGHLVRRHAVGTLRCVQAIVKMQTLVRARYARLGKE  120 (626)
Q Consensus        52 E~AAI~IQSAfRGyLARR~lraL---KgiVRLQAlIRG~LVRRQaa~tLr~mqAIVkIQA~IRgrrARrs~e  120 (626)
                      ..||+.||++||||++|+.++.+   +++++||+.+||+++|++|....   .+++.||+.+||+++|+.+.
T Consensus       791 r~aai~IQ~~~Rg~~aR~~~~~lr~~~AAi~IQs~~Rg~~~Rk~y~~lr---~aai~IQs~~Rg~laRr~~~  859 (1080)
T 2dfs_A          791 RRAAITIQRYVRGHQARCYATFLRRTRAAIIIQKFQRMYVVRKRYQCMR---DATIALQALLRGYLVRNKYQ  859 (1080)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhhcccccccchhHHHHHHHHhhHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHH
Confidence            45666666666666666665432   35666666666666666664332   35666666666666665443

>1n2d_C IQ2 and IQ3 motifs from MYO2P, A class V myosin; protein-peptide complex, myosin light chain, cell cycle; 2.00A {Saccharomyces cerevisiae}

Probab=98.02  E-value=6.6e-06  Score=62.09  Aligned_cols=43  Identities=19%  Similarity=0.292  Sum_probs=37.2

Q ss_pred             hhHHHHHHHHhhHHHHHHHhhHHHHHHHHHHHHHHHHHHHhhcC
Q 042390           75 KNVVKLQAAVRGHLVRRHAVGTLRCVQAIVKMQTLVRARYARLG  118 (626)
Q Consensus        75 KgiVRLQAlIRG~LVRRQaa~tLr~mqAIVkIQA~IRgrrARrs  118 (626)
                      ++++.||+.+||+++|+++... +...+++.||+.+||+++|+.
T Consensus         4 ~a~i~iQ~~~Rg~l~R~~~~~~-~~~~aai~IQ~~~Rg~~~Rk~   46 (48)
T 1n2d_C            4 QAIKYLQNNIKGFIIRQRVNDE-MKVNCATLLQAAYRGHSIRAN   46 (48)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHhHHHHHh
Confidence            4789999999999999999643 345699999999999999974

>2ix7_C Myosin-5A; contractIle protein/metal binding, actin-binding, UBL conjugation, Ca2+ regulation, myosin, calcium, IQ motif, acetylation; 2.5A {Mus musculus}

Probab=97.72  E-value=5.7e-05  Score=59.12  Aligned_cols=43  Identities=26%  Similarity=0.400  Sum_probs=37.6

Q ss_pred             hhHHHHHHHHhhHHHHHHHhhHHHHHHHHHHHHHHHHHHHhhcCCC
Q 042390           75 KNVVKLQAAVRGHLVRRHAVGTLRCVQAIVKMQTLVRARYARLGKE  120 (626)
Q Consensus        75 KgiVRLQAlIRG~LVRRQaa~tLr~mqAIVkIQA~IRgrrARrs~e  120 (626)
                      .+++.||+.+||+++|++|....   .+++.||+.+||+++|+.+.
T Consensus         6 ~aai~IQ~~~Rg~~~Rk~~~~~r---~aai~IQ~~~Rg~~aR~~~~   48 (58)
T 2ix7_C            6 AACIRIQKTIRGWLLRKRYLCMQ---RAAITVQRYVRGYQARCYAK   48 (58)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHH
Confidence            57899999999999999996543   59999999999999998654

>1wdc_A Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} PDB: 3jvt_A 3jtd_A 3pn7_A 3ts5_A 3tuy_A* 1scm_A

Probab=97.50  E-value=0.00017  Score=57.73  Aligned_cols=42  Identities=29%  Similarity=0.461  Sum_probs=30.9

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHhh---h-hHHHHHHHHhhHHHHHHH
Q 042390           52 ESVVIVIQAAVRGILAQRELLKL---K-NVVKLQAAVRGHLVRRHA   93 (626)
Q Consensus        52 E~AAI~IQSAfRGyLARR~lraL---K-giVRLQAlIRG~LVRRQa   93 (626)
                      ...++.||+++|||++|+.|..+   + ++..||.-+|+++.++..
T Consensus         6 ~~i~t~~Qa~~RG~l~R~~~~k~~~~~~A~~iIQrn~R~~~~l~~w   51 (64)
T 1wdc_A            6 SKIISMFQAHIRGYLIRKAYKKLQDQRIGLSVIQRNIRKWLVLRNW   51 (64)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCC
Confidence            45678888888888888888654   2 455778888888777654

>2bl0_A Major plasmodial myosin heavy chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum}

Probab=97.44  E-value=0.00017  Score=57.71  Aligned_cols=41  Identities=24%  Similarity=0.342  Sum_probs=26.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhh---h-hHHHHHHHHhhHHHHHHH
Q 042390           53 SVVIVIQAAVRGILAQRELLKL---K-NVVKLQAAVRGHLVRRHA   93 (626)
Q Consensus        53 ~AAI~IQSAfRGyLARR~lraL---K-giVRLQAlIRG~LVRRQa   93 (626)
                      ..++.||+++|||++|+.|..+   + ++..||.-+|+++.++..
T Consensus         5 ~i~t~~Qa~~RG~l~R~~~~k~~~~~~A~~iIQrn~R~~~~lr~w   49 (63)
T 2bl0_A            5 EIVKVVQAAARGWVERKHFRQAREKSVSARIIQDNIRAYLEFKNW   49 (63)
T ss_dssp             HHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccC
Confidence            4567777777777777777644   2 444667777776666543

>1kk8_A Myosin heavy chain, striated muscle; actin-detached, mechanics of motor, contractIle PROT; HET: ADP; 2.30A {Argopecten irradians} SCOP: b.34.3.1 c.37.1.9 PDB: 1kk7_A* 1qvi_A* 1s5g_A* 1sr6_A 1b7t_A* 1kqm_A* 1kwo_A* 1l2o_A* 1dfl_A* 2w4t_C 2w4v_C 2w4w_C 1dfk_A 2ec6_A 2otg_A* 2os8_A* 2ovk_A 2ekv_A 2ekw_A 2oy6_A* ...

Probab=97.28  E-value=0.00022  Score=81.79  Aligned_cols=42  Identities=29%  Similarity=0.423  Sum_probs=33.7

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHhh----hhHHHHHHHHhhHHHHHHH
Q 042390           52 ESVVIVIQAAVRGILAQRELLKL----KNVVKLQAAVRGHLVRRHA   93 (626)
Q Consensus        52 E~AAI~IQSAfRGyLARR~lraL----KgiVRLQAlIRG~LVRRQa   93 (626)
                      ..+|+.||++||||++|++|+.+    .+++.||+.+||+++||.+
T Consensus       779 ~~~~~~iQa~~Rg~l~R~~~~k~~~~r~a~~~IQ~~~R~~~~~r~~  824 (837)
T 1kk8_A          779 SKIISMFQAHIRGYLIRKAYKKLQDQRIGLSVIQRNIRKWLVLRNW  824 (837)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred             HhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcch
Confidence            44788888888888888888765    3678888888888888876

>2bl0_A Major plasmodial myosin heavy chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum}

Probab=97.25  E-value=0.0005  Score=54.99  Aligned_cols=44  Identities=25%  Similarity=0.131  Sum_probs=40.0

Q ss_pred             hHHHHHHHHhhHHHHHHHhhHHHHHHHHHHHHHHHHHHHhhcCC
Q 042390           76 NVVKLQAAVRGHLVRRHAVGTLRCVQAIVKMQTLVRARYARLGK  119 (626)
Q Consensus        76 giVRLQAlIRG~LVRRQaa~tLr~mqAIVkIQA~IRgrrARrs~  119 (626)
                      .++.||+.+||+++|+.|...+....++..||.-+|++..++..
T Consensus         6 i~t~~Qa~~RG~l~R~~~~k~~~~~~A~~iIQrn~R~~~~lr~w   49 (63)
T 2bl0_A            6 IVKVVQAAARGWVERKHFRQAREKSVSARIIQDNIRAYLEFKNW   49 (63)
T ss_dssp             HTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccC
Confidence            57899999999999999998888888998999999999998864

>2l53_B CAM, voltage-gated sodium channel type V alpha isoform variant; calmodulin, IQ motif, complex, Ca-binding protein; NMR {Homo sapiens}

Probab=97.23  E-value=0.00017  Score=52.01  Aligned_cols=25  Identities=40%  Similarity=0.393  Sum_probs=22.1

Q ss_pred             CchhhHHHHHHHHHHHHHHHHHHHH
Q 042390           48 SPLDESVVIVIQAAVRGILAQRELL   72 (626)
Q Consensus        48 ~~reE~AAI~IQSAfRGyLARR~lr   72 (626)
                      ..+|+.||++||.+||+||+|+.+.
T Consensus         2 rk~Ee~aA~vIQrA~R~yl~rr~~~   26 (31)
T 2l53_B            2 PGSEEVSAMVIQRAFRRHLLQRSLK   26 (31)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHCT
T ss_pred             chHHHHHHHHHHHHHHHHHHHHhhc
Confidence            4578999999999999999998754

>1wdc_A Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} PDB: 3jvt_A 3jtd_A 3pn7_A 3ts5_A 3tuy_A* 1scm_A

Probab=97.22  E-value=0.0006  Score=54.56  Aligned_cols=45  Identities=20%  Similarity=0.149  Sum_probs=40.4

Q ss_pred             hhHHHHHHHHhhHHHHHHHhhHHHHHHHHHHHHHHHHHHHhhcCC
Q 042390           75 KNVVKLQAAVRGHLVRRHAVGTLRCVQAIVKMQTLVRARYARLGK  119 (626)
Q Consensus        75 KgiVRLQAlIRG~LVRRQaa~tLr~mqAIVkIQA~IRgrrARrs~  119 (626)
                      ..++.|||.+||+++|+.|...+....++..||.-+|++..++..
T Consensus         7 ~i~t~~Qa~~RG~l~R~~~~k~~~~~~A~~iIQrn~R~~~~l~~w   51 (64)
T 1wdc_A            7 KIISMFQAHIRGYLIRKAYKKLQDQRIGLSVIQRNIRKWLVLRNW   51 (64)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCC
Confidence            357899999999999999998888888998999999999998754

>2kxw_B Sodium channel protein type 2 subunit alpha; action potential, amino acid motifs, animals, autism, biomol brain chemistry; NMR {Rattus norvegicus}

Probab=97.13  E-value=0.00022  Score=49.89  Aligned_cols=23  Identities=35%  Similarity=0.390  Sum_probs=20.4

Q ss_pred             CchhhHHHHHHHHHHHHHHHHHH
Q 042390           48 SPLDESVVIVIQAAVRGILAQRE   70 (626)
Q Consensus        48 ~~reE~AAI~IQSAfRGyLARR~   70 (626)
                      ..+++.||++||.+||+||+|+.
T Consensus         2 rk~Ee~aA~vIQrA~R~yl~~~~   24 (27)
T 2kxw_B            2 RKQEEVSAIVIQRAYRRYLLKQK   24 (27)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHSC
T ss_pred             hHHHHHHHHHHHHHHHHHHHHhh
Confidence            45789999999999999999864

>1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A

Probab=96.60  E-value=0.0021  Score=75.48  Aligned_cols=42  Identities=31%  Similarity=0.434  Sum_probs=36.9

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHhh----hhHHHHHHHHhhHHHHHHH
Q 042390           52 ESVVIVIQAAVRGILAQRELLKL----KNVVKLQAAVRGHLVRRHA   93 (626)
Q Consensus        52 E~AAI~IQSAfRGyLARR~lraL----KgiVRLQAlIRG~LVRRQa   93 (626)
                      ..+|+.||++||||++|+.|..+    .+++.||+.+|||+.||.+
T Consensus       792 ~~~~~~iQ~~~Rg~l~R~~~~k~~~~~~a~~~iQ~~~r~~~~~k~~  837 (1184)
T 1i84_S          792 TDVIIAFQAQCRGYLARKAFAKRQQQLESIFCIQYNVRSFMNVXHW  837 (1184)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence            36899999999999999999765    3788999999999999875

>1kk8_A Myosin heavy chain, striated muscle; actin-detached, mechanics of motor, contractIle PROT; HET: ADP; 2.30A {Argopecten irradians} SCOP: b.34.3.1 c.37.1.9 PDB: 1kk7_A* 1qvi_A* 1s5g_A* 1sr6_A 1b7t_A* 1kqm_A* 1kwo_A* 1l2o_A* 1dfl_A* 2w4t_C 2w4v_C 2w4w_C 1dfk_A 2ec6_A 2otg_A* 2os8_A* 2ovk_A 2ekv_A 2ekw_A 2oy6_A* ...

Probab=96.41  E-value=0.0056  Score=70.34  Aligned_cols=46  Identities=20%  Similarity=0.158  Sum_probs=40.8

Q ss_pred             hhHHHHHHHHhhHHHHHHHhhHHHHHHHHHHHHHHHHHHHhhcCCC
Q 042390           75 KNVVKLQAAVRGHLVRRHAVGTLRCVQAIVKMQTLVRARYARLGKE  120 (626)
Q Consensus        75 KgiVRLQAlIRG~LVRRQaa~tLr~mqAIVkIQA~IRgrrARrs~e  120 (626)
                      +.+++||+.+||+++|++|...+....+++.||+.+|++++|+.+.
T Consensus       780 ~~~~~iQa~~Rg~l~R~~~~k~~~~r~a~~~IQ~~~R~~~~~r~~~  825 (837)
T 1kk8_A          780 KIISMFQAHIRGYLIRKAYKKLQDQRIGLSVIQRNIRKWLVLRNWQ  825 (837)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCH
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcchH
Confidence            3578999999999999999877766789999999999999998754

>3gn4_A Myosin-VI; unconventional myosin, motility, lever ARM, 3-helix bundle, actin-binding, ATP-binding, calmodulin-binding, coiled coil; 2.70A {Sus scrofa}

Probab=95.85  E-value=0.0086  Score=56.39  Aligned_cols=32  Identities=22%  Similarity=0.341  Sum_probs=18.5

Q ss_pred             hHHHHHHHHHHHHHHHHHHHH-hhhhHHHHHHH
Q 042390           52 ESVVIVIQAAVRGILAQRELL-KLKNVVKLQAA   83 (626)
Q Consensus        52 E~AAI~IQSAfRGyLARR~lr-aLKgiVRLQAl   83 (626)
                      ..|+|+||+++||||+|+.++ .+.|+.++.++
T Consensus        45 ~~~~i~iQktvR~~L~rkkhkPRi~g~~kv~~L   77 (148)
T 3gn4_A           45 AEACIKMQKTIRMWLCKRRHKPRIDGLVKVGTL   77 (148)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHH
Confidence            456666666666666666665 34555555444

>1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A

Probab=95.47  E-value=0.024  Score=66.70  Aligned_cols=56  Identities=23%  Similarity=0.234  Sum_probs=44.8

Q ss_pred             HHHHHHHHhh-hhHHHHHHHHhhHHHHHHHhhHHHHHHHHHHHHHHHHHHHhhcCCC
Q 042390           65 ILAQRELLKL-KNVVKLQAAVRGHLVRRHAVGTLRCVQAIVKMQTLVRARYARLGKE  120 (626)
Q Consensus        65 yLARR~lraL-KgiVRLQAlIRG~LVRRQaa~tLr~mqAIVkIQA~IRgrrARrs~e  120 (626)
                      +|...+-..+ ..++.||+.+||+++|++|...+....+++.||+.+|+++.|+.+.
T Consensus       782 ~LE~~r~~~l~~~~~~iQ~~~Rg~l~R~~~~k~~~~~~a~~~iQ~~~r~~~~~k~~~  838 (1184)
T 1i84_S          782 HLEEERDLKITDVIIAFQAQCRGYLARKAFAKRQQQLESIFCIQYNVRSFMNVXHWP  838 (1184)
T ss_dssp             HHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhH
Confidence            3443333333 4678999999999999999887777789999999999999998753

>4anj_A Unconventional myosin-VI, green fluorescent prote; motor protein-metal-bindng protein complex, molecular motor, metal-binding protein, transition state; HET: CR2 ADP; 2.60A {Sus scrofa}

Probab=90.64  E-value=0.31  Score=57.54  Aligned_cols=42  Identities=12%  Similarity=0.069  Sum_probs=32.3

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHhhh-hHHHHHHHHhhHHHHHHH
Q 042390           51 DESVVIVIQAAVRGILAQRELLKLK-NVVKLQAAVRGHLVRRHA   93 (626)
Q Consensus        51 eE~AAI~IQSAfRGyLARR~lraLK-giVRLQAlIRG~LVRRQa   93 (626)
                      ...+|+.||. +|||++|++|++++ +++.+|.+.|+...|+..
T Consensus       774 ~~~~~~~iq~-~r~~l~r~~~~k~~~~a~~i~~~~r~~~~r~~~  816 (1052)
T 4anj_A          774 PDHLAELVKR-VNHWLICSRWKKVQWCSLSVIKLKNKIKYRAEA  816 (1052)
T ss_dssp             HHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence            3567777774 79999999998775 778888888887666554

>1w7j_A Myosin VA; motor protein, unconventional myosin, myosin V, chicken, molecular motor, ATPase, ELC, IQ motif, muscle protein, ATP-binding; HET: ADP; 2A {Gallus gallus} SCOP: b.34.3.1 c.37.1.9 PDB: 1w7i_A* 1oe9_A* 1w8j_A

Probab=90.63  E-value=0.14  Score=58.72  Aligned_cols=25  Identities=24%  Similarity=0.575  Sum_probs=20.0

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHhhhh
Q 042390           52 ESVVIVIQAAVRGILAQRELLKLKN   76 (626)
Q Consensus        52 E~AAI~IQSAfRGyLARR~lraLKg   76 (626)
                      ..+|+.||++||||++||+|+++|.
T Consensus       768 ~~~~~~iQ~~~Rg~l~R~~~~~~r~  792 (795)
T 1w7j_A          768 RAACIRIQKTIRGWLMRKKYMRMRR  792 (795)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            4578888888888888888887764

>4dck_A Sodium channel protein type 5 subunit alpha; IQ-motif, EF-hand, voltage-gated sodium channel regulation, CTD binds to FGF13 and CAM. CAM binds to Ca2+.; 2.20A {Homo sapiens} PDB: 2kbi_A

Probab=88.42  E-value=0.31  Score=46.64  Aligned_cols=26  Identities=38%  Similarity=0.394  Sum_probs=22.8

Q ss_pred             CchhhHHHHHHHHHHHHHHHHHHHHh
Q 042390           48 SPLDESVVIVIQAAVRGILAQRELLK   73 (626)
Q Consensus        48 ~~reE~AAI~IQSAfRGyLARR~lra   73 (626)
                      ..++..||++||.|||.|+.|+.+..
T Consensus       126 ~~~e~~aA~~IQra~R~~~~r~~~~~  151 (168)
T 4dck_A          126 RKHEEVSAMVIQRAFRRHLLQRSLKH  151 (168)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHhccccc
Confidence            35789999999999999999988764

>3gn4_A Myosin-VI; unconventional myosin, motility, lever ARM, 3-helix bundle, actin-binding, ATP-binding, calmodulin-binding, coiled coil; 2.70A {Sus scrofa}

Probab=85.14  E-value=1.4  Score=41.49  Aligned_cols=23  Identities=22%  Similarity=0.369  Sum_probs=19.4

Q ss_pred             hHHHHHHHHhhHHHHHHHhhHHH
Q 042390           76 NVVKLQAAVRGHLVRRHAVGTLR   98 (626)
Q Consensus        76 giVRLQAlIRG~LVRRQaa~tLr   98 (626)
                      ++++||+.+|||++|+++...+.
T Consensus        47 ~~i~iQktvR~~L~rkkhkPRi~   69 (148)
T 3gn4_A           47 ACIKMQKTIRMWLCKRRHKPRID   69 (148)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhhhhHHH
Confidence            57899999999999999975544

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	626
d1kk8a2	789	c.37.1.9 (A:1-28,A:77-837) Myosin S1, motor domain	7e-06
d1kk8a2	789	c.37.1.9 (A:1-28,A:77-837) Myosin S1, motor domain	0.001
d2mysa2	794	c.37.1.9 (A:4-33,A:80-843) Myosin S1, motor domain	1e-05
d2mysa2	794	c.37.1.9 (A:4-33,A:80-843) Myosin S1, motor domain	3e-05

>d1kk8a2 c.37.1.9 (A:1-28,A:77-837) Myosin S1, motor domain {Bay scallop (Aequipecten irradians) [TaxId: 31199]} Length = 789

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Motor proteins
domain: Myosin S1, motor domain
species: Bay scallop (Aequipecten irradians) [TaxId: 31199]

 Score = 46.6 bits (110), Expect = 7e-06
 Identities = 12/42 (28%), Positives = 23/42 (54%), Gaps = 4/42 (9%)

Query: 55  VIVIQAAVRGILAQRELLKLKN----VVKLQAAVRGHLVRRH 92
           + + QA +RG L ++   KL++    +  +Q  +R  LV R+
Sbjct: 734 ISMFQAHIRGYLIRKAYKKLQDQRIGLSVIQRNIRKWLVLRN 775

>d1kk8a2 c.37.1.9 (A:1-28,A:77-837) Myosin S1, motor domain {Bay scallop (Aequipecten irradians) [TaxId: 31199]} Length = 789

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Motor proteins
domain: Myosin S1, motor domain
species: Bay scallop (Aequipecten irradians) [TaxId: 31199]

 Score = 39.3 bits (91), Expect = 0.001
 Identities = 14/62 (22%), Positives = 25/62 (40%), Gaps = 1/62 (1%)

Query: 56  IVIQAAVRGIL-AQRELLKLKNVVKLQAAVRGHLVRRHAVGTLRCVQAIVKMQTLVRARY 114
           +  +A V G L   R+    K +   QA +RG+L+R+           +  +Q  +R   
Sbjct: 712 VFFKAGVLGNLEEMRDERLSKIISMFQAHIRGYLIRKAYKKLQDQRIGLSVIQRNIRKWL 771

Query: 115 AR 116
             
Sbjct: 772 VL 773

>d2mysa2 c.37.1.9 (A:4-33,A:80-843) Myosin S1, motor domain {Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]} Length = 794

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Motor proteins
domain: Myosin S1, motor domain
species: Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]

 Score = 45.9 bits (108), Expect = 1e-05
 Identities = 10/42 (23%), Positives = 17/42 (40%), Gaps = 4/42 (9%)

Query: 55  VIVIQAAVRGILAQRELLKLKN----VVKLQAAVRGHLVRRH 92
           +   QA  RG L + E   +      +  +Q  VR  +  +H
Sbjct: 738 ITATQARCRGFLMRVEYRAMVERRESIFCIQYNVRSFMNVKH 779

>d2mysa2 c.37.1.9 (A:4-33,A:80-843) Myosin S1, motor domain {Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]} Length = 794

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Motor proteins
domain: Myosin S1, motor domain
species: Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]

 Score = 44.7 bits (105), Expect = 3e-05
 Identities = 14/62 (22%), Positives = 27/62 (43%), Gaps = 1/62 (1%)

Query: 56  IVIQAAVRGIL-AQRELLKLKNVVKLQAAVRGHLVRRHAVGTLRCVQAIVKMQTLVRARY 114
           +  +A + G+L   R+    + +   QA  RG L+R      +   ++I  +Q  VR+  
Sbjct: 716 VFFKAGLLGLLEEMRDDKLAEIITATQARCRGFLMRVEYRAMVERRESIFCIQYNVRSFM 775

Query: 115 AR 116
             
Sbjct: 776 NV 777

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	626
d1kk8a2	789	Myosin S1, motor domain {Bay scallop (Aequipecten	97.58
d2mysa2	794	Myosin S1, motor domain {Chicken (Gallus gallus),	97.56
d2mysa2	794	Myosin S1, motor domain {Chicken (Gallus gallus),	96.71
d1kk8a2	789	Myosin S1, motor domain {Bay scallop (Aequipecten	96.31
d1w7ja2	730	Myosin S1, motor domain {Chicken (Gallus gallus),	91.8

>d1kk8a2 c.37.1.9 (A:1-28,A:77-837) Myosin S1, motor domain {Bay scallop (Aequipecten irradians) [TaxId: 31199]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Motor proteins
domain: Myosin S1, motor domain
species: Bay scallop (Aequipecten irradians) [TaxId: 31199]

Probab=97.58  E-value=2.5e-05  Score=85.83  Aligned_cols=44  Identities=27%  Similarity=0.390  Sum_probs=37.9

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHhhh----hHHHHHHHHhhHHHHHHHh
Q 042390           51 DESVVIVIQAAVRGILAQRELLKLK----NVVKLQAAVRGHLVRRHAV   94 (626)
Q Consensus        51 eE~AAI~IQSAfRGyLARR~lraLK----giVRLQAlIRG~LVRRQaa   94 (626)
                      ...+|+.||++||||++||+|+++|    +++.||+.+||+++||.+.
T Consensus       730 l~~~~~~IQ~~~R~~~~Rk~y~k~r~~~~ai~~iQ~~~R~~~~rr~~~  777 (789)
T d1kk8a2         730 LSKIISMFQAHIRGYLIRKAYKKLQDQRIGLSVIQRNIRKWLVLRNWQ  777 (789)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccH
Confidence            3568999999999999999998775    5778999999999998873

>d2mysa2 c.37.1.9 (A:4-33,A:80-843) Myosin S1, motor domain {Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Motor proteins
domain: Myosin S1, motor domain
species: Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]

Probab=97.56  E-value=3.5e-05  Score=84.81  Aligned_cols=42  Identities=24%  Similarity=0.369  Sum_probs=35.4

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHhh----hhHHHHHHHHhhHHHHHHH
Q 042390           52 ESVVIVIQAAVRGILAQRELLKL----KNVVKLQAAVRGHLVRRHA   93 (626)
Q Consensus        52 E~AAI~IQSAfRGyLARR~lraL----KgiVRLQAlIRG~LVRRQa   93 (626)
                      ..+|+.||++||||++|++|+.+    ++++.||+.+||+++||.+
T Consensus       735 ~~~~~~IQ~~~Rg~l~Rk~~~~~~~~r~a~~~IQ~~~R~~~~~r~~  780 (794)
T d2mysa2         735 AEIITATQARCRGFLMRVEYRAMVERRESIFCIQYNVRSFMNVKHW  780 (794)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence            46888999999999999998654    3688899999999998887

>d2mysa2 c.37.1.9 (A:4-33,A:80-843) Myosin S1, motor domain {Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Motor proteins
domain: Myosin S1, motor domain
species: Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]

Probab=96.71  E-value=0.0016  Score=71.45  Aligned_cols=56  Identities=23%  Similarity=0.149  Sum_probs=45.2

Q ss_pred             HHHHHHHHhh-hhHHHHHHHHhhHHHHHHHhhHHHHHHHHHHHHHHHHHHHhhcCCC
Q 042390           65 ILAQRELLKL-KNVVKLQAAVRGHLVRRHAVGTLRCVQAIVKMQTLVRARYARLGKE  120 (626)
Q Consensus        65 yLARR~lraL-KgiVRLQAlIRG~LVRRQaa~tLr~mqAIVkIQA~IRgrrARrs~e  120 (626)
                      +|.+++-..+ +.++.||+.+||+++|++|...+....+++.||+.+|++++|+.+.
T Consensus       725 ~LE~~r~~~l~~~~~~IQ~~~Rg~l~Rk~~~~~~~~r~a~~~IQ~~~R~~~~~r~~~  781 (794)
T d2mysa2         725 LLEEMRDDKLAEIITATQARCRGFLMRVEYRAMVERRESIFCIQYNVRSFMNVKHWP  781 (794)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccH
Confidence            4444433333 5678999999999999999877777789999999999999998754

>d1kk8a2 c.37.1.9 (A:1-28,A:77-837) Myosin S1, motor domain {Bay scallop (Aequipecten irradians) [TaxId: 31199]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Motor proteins
domain: Myosin S1, motor domain
species: Bay scallop (Aequipecten irradians) [TaxId: 31199]

Probab=96.31  E-value=0.0038  Score=68.31  Aligned_cols=46  Identities=20%  Similarity=0.158  Sum_probs=40.1

Q ss_pred             hhHHHHHHHHhhHHHHHHHhhHHHHHHHHHHHHHHHHHHHhhcCCC
Q 042390           75 KNVVKLQAAVRGHLVRRHAVGTLRCVQAIVKMQTLVRARYARLGKE  120 (626)
Q Consensus        75 KgiVRLQAlIRG~LVRRQaa~tLr~mqAIVkIQA~IRgrrARrs~e  120 (626)
                      +.++.||+.+||+++||+|........+++.||+.+|++++|+.+.
T Consensus       732 ~~~~~IQ~~~R~~~~Rk~y~k~r~~~~ai~~iQ~~~R~~~~rr~~~  777 (789)
T d1kk8a2         732 KIISMFQAHIRGYLIRKAYKKLQDQRIGLSVIQRNIRKWLVLRNWQ  777 (789)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccH
Confidence            4678899999999999999876666668999999999999998764

>d1w7ja2 c.37.1.9 (A:63-792) Myosin S1, motor domain {Chicken (Gallus gallus), Va isoform [TaxId: 9031]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Motor proteins
domain: Myosin S1, motor domain
species: Chicken (Gallus gallus), Va isoform [TaxId: 9031]

Probab=91.80  E-value=0.045  Score=58.88  Aligned_cols=24  Identities=25%  Similarity=0.595  Sum_probs=14.7

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHhhh
Q 042390           52 ESVVIVIQAAVRGILAQRELLKLK   75 (626)
Q Consensus        52 E~AAI~IQSAfRGyLARR~lraLK   75 (626)
                      ..+|+.||++||||++||+|.++|
T Consensus       706 ~~~~~~iQ~~~R~~l~Rk~~~r~r  729 (730)
T d1w7ja2         706 RAACIRIQKTIRGWLMRKKYMRMR  729 (730)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhc
Confidence            345666666666666666665543