Citrus Sinensis ID: 042453

Local Sequence Feature Prediction

Prediction and (Method)	Result

Residue Number Marker

Protein Sequence

Secondary Structure (PSIPRED)

Secondary Structure Prediction (SSPRO)

Coil and Loop (DISEMBL)

Flexible Loop (DISEMBL)

Low Complexity Region (SEG)

Disordered region (IsUnstruct)

Disordered Region (DISOPRED)

Disordered Region (DISEMBL)

Disordered Region (DISPRO)

Transmembrane Helix (TMHMM)

Transmembrane Helix (HMMTOP)

Transmembrane Helix (MEMSAT)

TM Helix, Signal Peptide (MEMSAT_SVM)

TM Helix, Signal Peptide (Phobius)

Signal Peptide (SignalP HMM Mode)

Signal Peptide (SignalP NN Mode)

Coiled Coils (COILS)

Positional Conservation

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660------

MEIEDEKLRIFFELLTLPGSHFLSSVGSLAFGDLEGIISSFRESKSDDRRFYIFTATKTLHLRTNSRRDRVAWIQALVSTRSLYPLRTLNDGLSIVPKDLSISTVRLKKRLVDEGVGENLVKDCEQIMLSEFNEIQGQFKVLCEERSNLLDTIRQLEAANIEADASGTPDGEYQLSKHEFSNLGRGKYSECSTTESSDDIEKQELEEVSDDDEISFYDTREFFTEPSVSCRPVKEVTNHAREEEQLGNTFNTSEKMYDEKEKCDSRYPNIERRKKLPDPVEKERGVSLWSMIKDNVGKDLTRVCLPVYFNEPISSLQKCFEDLEYSYLLDRAYEYGKAGNSLLRILNVAAFAVSGYASSEGRHCKPFNPLLGETYEADYPEKGVRFFSEKVSHHPTVIACHCEGKGWKFWGDSNLRTKFWGRSIQLDPVGVLTVEFDDGEVFQWSKVTTSIYNLILGKIYCDHHGTMEIHGNCQYSCKLKFKEQSILDRNPHQVNGFVEDVLGKKVATLFGKWDNSMYYISGDGSGKLKDGNVSPDASLLWKSNKAPLNLTRYNLTSFAITLNELTPGLQEKLPPTDSRLRPDQRHLENGEYEKANAEKQRLERRQRMSRKLQENGWKPRWFRREGENGSFRYVGGYWEAREQLKWDECPNIFGEFCEDVHSSEDS

cccccHHHHHHHHHccccccccccccccccccEEEEEEEEEEccccccccEEEEccccEEEEEcccHHHHHHHHHHHHccccccccccccccccccccccccHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHccccccccccccccccccccHHHHHHHHcccHHHHHHHHHccccccHHHHHHHHHHHHHHHccccccccccccccccccEEEEEEccccEEEEEEcccccccEEEEEEEcccEEEEEEcccccEEccEEEEEEEEEEEEEEcccccEEEEEEEEEEEEEEEEcEEEEEEccEEEEEEccccEEEEEEEEcccccccccEEEEEEEcccccEEEEEEEEEcccEEEEEccccccccccccccccccccccccccccccccccccccEEccccccccccccccccccccHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHcccccccccEEEEcccccEEEcccHHHHHccccccccccccccccccccccccc

ccccHHHHHHHHHHcccccHcccccccccccEEEEEEEEEEEEccccccEEEEEccccEEEEEcccHHHHHHHHHHHHHHHHHccccccccccccccccccEcHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHccccccHHHHcccccccccccccccccccccccccHcccccccccccccHHHHcHHHHHccccccccccccccccccccccccccccccccccccccccccccccccEcccccccccccccccHHHHHHHHccHHHccccccEEccccHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHcccccccccccccccccEEEcccccccEEEEEcccccccEEEEEEcccccEEEEEEcccccccccEEEEEEEEEEEEEEccccEEEEccccEEEEEEEEcHEEHHcccEEEEEcccccEEEEEEEEcccccccccEEEEEEEcccccEEEEEEEccccEEEEEcccccccccccccccccEEEEEccccccccHHccccHHEEEHHcccccHHHccccccccccHcHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHcccccEEEEEccccccEEEccccHHHHccccccccccccccccccccccccc

MEIEDEKLRIFFELLtlpgshflssvgslafgdLEGIISSFresksddrRFYIFTATKTLHLRTNSRRDRVAWIQALVSTrslyplrtlndglsivpkdlsisTVRLKKRLVDEGVGENLVKDCEQIMLSEFNEIQGQFKVLCEERSNLLDTIRQLEAANieadasgtpdgeyqlskhefsnlgrgkysecsttessddIEKQEleevsdddeisfydtrefftepsvscrpvkevtnhareeeqlgntfntsekmydekekcdsrypnierrkklpdpvekerGVSLWSMIKdnvgkdltrvclpvyfnepissLQKCFEDLEYSYLLDRAYEYGKAGNSLLRILNVAAFAVSgyassegrhckpfnpllgetyeadypekgvRFFSekvshhptviachcegkgwkfwgdsnlrtkfwgrsiqldpvgvltvefddgevfqwsKVTTSIYNLILGkiycdhhgtmeihgncqyscklkfkeqsildrnphqvngfveDVLGKKVATLFgkwdnsmyyisgdgsgklkdgnvspdasllwksnkaplnltryNLTSFAITLneltpglqeklpptdsrlrpdqrhlengeYEKANAEKQRLERRQRMSRKLqengwkprwfrregengsfryVGGYWEAREqlkwdecpnifgefcedvhsseds

MEIEDEKLRIFFELLTLPGSHFLSSVGSLAFGDLEGIISSfresksddrrFYIFTatktlhlrtnsrrDRVAWIQALvstrslyplrtlndglsivpkdlsistvrlkkrlvdegvgeNLVKDCEQIMLSEFNEIQGQFKVLCEERSNLLDTIRQLEAAnieadasgtpdgeyqlSKHEfsnlgrgkysecsttessddiekqeleevsdddeiSFYDTrefftepsvscrpvkevtnhareeeqlgntfntsekmydekekcdsrypnierrkklpdpvekergvsLWSMIKDNVGKDLTRVCLPVYFNEPISSLQKCFEDLEYSYLLDRAYEYGKAGNSLLRILNVAAFAVSGYASSEGRHCKPFNPLLGETYEADYPEKGVRFFSEKVSHHPTVIACHCEGKGWKFWGDSNLRTKFWGRSIQLDPVGVLTVEFDDGEVFQWSKVTTSIYNLILGKIYCDHHGTMEIHGNCQYSCKLKFKEQSILDRNPHQVNGFVEDVLGKKVATLFGKWDNSMYYISGDGSGKLKDGNVSPDASLLWKSNKAPLNLTRYNLTSFAITLNeltpglqeklpptdsrlrpdqrhlengeyekanaekqrlerrqrmsrklqengwkprwfrregengsFRYVGGYWEAREQLKWDECPNIFGEFCEdvhsseds

*******LRIFFELLTLPGSHFLSSVGSLAFGDLEGIISSFRESKSDDRRFYIFTATKTLHLRTNSRRDRVAWIQALVSTRSLYPLRTLNDGLSIVPKDLSISTVRLKKRLVDEGVGENLVKDCEQIMLSEFNEIQGQFKVLCEERSNLLDTIRQLE**********************************************************FYDTREFF*************************************************************GVSLWSMIKDNVGKDLTRVCLPVYFNEPISSLQKCFEDLEYSYLLDRAYEYGKAGNSLLRILNVAAFAVSGYASSEGRHCKPFNPLLGETYEADYPEKGVRFFSEKVSHHPTVIACHCEGKGWKFWGDSNLRTKFWGRSIQLDPVGVLTVEFDDGEVFQWSKVTTSIYNLILGKIYCDHHGTMEIHGNCQYSCKLKFKEQSILDRNPHQVNGFVEDVLGKKVATLFGKWDNSMYYISGDG************ASLLWKSNKAPLNLTRYNLTSFAITLNEL***************************************************WKPRWFRREGENGSFRYVGGYWEAREQLKWDECPNIFGEFCED*******

***********FEL******************DLEGIISSFRESKSDDRRFYIFTATKTLHLRTNSRRDRVAWIQALV****************************************************************************************************************************************************************************************************************SLWSMIKDNVGKDLTRVCLPVYFNEPISSLQKCFEDLEYSYLLDRAYEYGKAGNSLLRILNVAAFAVSGYASSEGRHCKPFNPLLGETYEADYPEKGVRFFSEKVSHHPTVIACHCEGKGWKFWGDSNLRTKFWGRSIQLDPVGVLTVEFDDGEVFQWSKVTTSIYNLILGKIYCDHHGTMEIHGNCQYSCKLKFKEQSILDRNPHQVNGFVEDVLGKKVATLFGKWDNSMYYISGD********NVSPDASLLWKSNKAPLNLTRYNLTSFAITLNELTPGLQEKLPPTDSRLRPDQRHLENGEYEKANAEKQRLER**************PRWFRREGENGSFRYVGGYWEAREQLKWDECPNIFGEFC*********

MEIEDEKLRIFFELLTLPGSHFLSSVGSLAFGDLEGIISSFRESKSDDRRFYIFTATKTLHLRTNSRRDRVAWIQALVSTRSLYPLRTLNDGLSIVPKDLSISTVRLKKRLVDEGVGENLVKDCEQIMLSEFNEIQGQFKVLCEERSNLLDTIRQLEAANIEADASGTPDGEYQLSKHEFSNL*****************EKQELEEVSDDDEISFYDTREFFTEPSVSCRPVKEVTNHAREEEQLGNTFNTSEKM********SRYPNIERRKKLPDPVEKERGVSLWSMIKDNVGKDLTRVCLPVYFNEPISSLQKCFEDLEYSYLLDRAYEYGKAGNSLLRILNVAAFAVSGYASSEGRHCKPFNPLLGETYEADYPEKGVRFFSEKVSHHPTVIACHCEGKGWKFWGDSNLRTKFWGRSIQLDPVGVLTVEFDDGEVFQWSKVTTSIYNLILGKIYCDHHGTMEIHGNCQYSCKLKFKEQSILDRNPHQVNGFVEDVLGKKVATLFGKWDNSMYYISGDGSGKLKDGNVSPDASLLWKSNKAPLNLTRYNLTSFAITLNELTPGLQEKLPPTDSRLRPDQRHLENGEYEKANAEKQRLERRQRMSRKLQENGWKPRWFRREGENGSFRYVGGYWEAREQLKWDECPNIFGEFCE********

************************SVGSLAFGDLEGIISSFRESKSDDRRFYIFTATKTLHLRTNSRRDRVAWIQALVSTRSLYP************KDLSISTVRLKKRLVDEGVGENLVKDCEQIMLSEFNEIQGQFKVLCEERSNLLDTIRQLEAANIE****************************************************SFYD**EFFT************************************************RKKLPDPVEKERGVSLWSMIKDNVGKDLTRVCLPVYFNEPISSLQKCFEDLEYSYLLDRAYEYGKAGNSLLRILNVAAFAVSGYASSEGRHCKPFNPLLGETYEADYPEKGVRFFSEKVSHHPTVIACHCEGKGWKFWGDSNLRTKFWGRSIQLDPVGVLTVEFDDGEVFQWSKVTTSIYNLILGKIYCDHHGTMEIHGNCQYSCKLKFKEQSILDRNPHQVNGFVEDVLGKKVATLFGKWDNSMYYISGDGSGKLKDGNVSPDASLLWKSNKAPLNLTRYNLTSFAITLNELTPGLQEKLPPTDSRLRPDQRHLENGEYEKANAEKQRLERRQRMSRKLQENGWKPRWFRREGENGSFRYVGGYWEAREQLKWDECPNIFGEFC*********

oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo

iiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo

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MEIEDEKLRIFFELLTLPGSHFLSSVGSLAFGDLEGIISSFRESKSDDRRFYIFTATKTLHLRTNSRRDRVAWIQALVSTRSLYPLRTLNDGLSIVPKDLSISTVRLKKRLVDEGVGENLVKDCEQIMLSEFNEIQGQFKVLCEERSNLLDTIRQLEAANIEADASGTPDGEYQLSKHEFSNLGRGKYSECSTTESSDDIEKQELEEVSDDDEISFYDTREFFTEPSVSCRPVKEVTNHAREEEQLGNTFNTSEKMYDEKEKCDSRYPNIERRKKLPDPVEKERGVSLWSMIKDNVGKDLTRVCLPVYFNEPISSLQKCFEDLEYSYLLDRAYEYGKAGNSLLRILNVAAFAVSGYASSEGRHCKPFNPLLGETYEADYPEKGVRFFSEKVSHHPTVIACHCEGKGWKFWGDSNLRTKFWGRSIQLDPVGVLTVEFDDGEVFQWSKVTTSIYNLILGKIYCDHHGTMEIHGNCQYSCKLKFKEQSILDRNPHQVNGFVEDVLGKKVATLFGKWDNSMYYISGDGSGKLKDGNVSPDASLLWKSNKAPLNLTRYNLTSFAITLNELTPGLQEKLPPTDSRLRPDQxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxGWKPRWFRREGENGSFRYVGGYWEAREQLKWDECPNIFGEFCEDVHSSEDS

no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Alignment graph	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query		666	2.2.26 [Sep-21-2011]
Q940Y1		721	Oxysterol-binding protein	yes	no	0.876	0.809	0.725	0.0
Q9SU36		693	Oxysterol-binding protein	no	no	0.869	0.835	0.714	0.0
Q8L751		814	Oxysterol-binding protein	no	no	0.980	0.802	0.588	0.0
Q9SAF0		816	Oxysterol-binding protein	no	no	0.932	0.761	0.565	0.0
O80866		760	Oxysterol-binding protein	no	no	0.909	0.797	0.588	0.0
Q8S8P9		489	Oxysterol-binding protein	no	no	0.618	0.842	0.675	1e-176
Q9H4L5		887	Oxysterol-binding protein	no	no	0.650	0.488	0.375	2e-79
Q9DBS9		855	Oxysterol-binding protein	yes	no	0.707	0.550	0.354	3e-79
Q9BZF3		934	Oxysterol-binding protein	no	no	0.533	0.380	0.428	4e-79
Q8BXR9		959	Oxysterol-binding protein	no	no	0.533	0.370	0.425	9e-79

>sp\|Q940Y1\|ORP2A_ARATH Oxysterol-binding protein-related protein 2A OS=Arabidopsis thaliana GN=ORP2A PE=2 SV=1	Back alignment and function desciption

 Score =  945 bits (2443), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 453/624 (72%), Positives = 521/624 (83%), Gaps = 40/624 (6%)

Query: 38  ISSFRESKSDDRRFYIFTATKTLHLRTNSRRDRVAWIQALVSTRSLYPLRTLNDGLSIVP 97
           +SSFRESKSDDR+FYIFTATKTLHLRT+S  DR AW+QAL ST+ ++PLR+LN   S +P
Sbjct: 133 VSSFRESKSDDRKFYIFTATKTLHLRTDSITDRAAWLQALASTKCIFPLRSLNGDFSFIP 192

Query: 98  -KDLSISTVRLKKRLVDEGVGENLVKDCEQIMLSEFNEIQGQFKVLCEERSNLLDTIRQL 156
            KDLSIST RLKKRL +EG+ ENLVK+CEQIMLSEF+E+ GQ K+L EER+NLLD +RQL
Sbjct: 193 PKDLSISTERLKKRLHEEGMNENLVKECEQIMLSEFSEMHGQVKLLHEERTNLLDALRQL 252

Query: 157 EAANIEADASGTPDGEYQLSKHEFSNLGRGKYSECSTTESSDDIEKQELEEVSDDDEISF 216
           EAAN+E  ASG         KHEFS+LGRGKYSECSTT SSD   KQE E+VS++DE SF
Sbjct: 253 EAANLEVGASG---------KHEFSSLGRGKYSECSTTASSDG--KQEFEDVSEEDEPSF 301

Query: 217 YDTREFFTEPSVSCRPVKEVTNHAREEEQLGNTFNTSEKMYDEKEKCDSRYPNIERRKKL 276
           +DT+EFF EP++       ++ H                             +I+RR KL
Sbjct: 302 HDTKEFFNEPNIGSESNLAISGHT----------------------------DIKRRTKL 333

Query: 277 PDPVEKERGVSLWSMIKDNVGKDLTRVCLPVYFNEPISSLQKCFEDLEYSYLLDRAYEYG 336
           PDP EKE+GVSLWSMIKDNVGKDLTRVCLPVYFNEPISSLQKCFEDLEYSYLLDRAYE+G
Sbjct: 334 PDPAEKEKGVSLWSMIKDNVGKDLTRVCLPVYFNEPISSLQKCFEDLEYSYLLDRAYEHG 393

Query: 337 KAGNSLLRILNVAAFAVSGYASSEGRHCKPFNPLLGETYEADYPEKGVRFFSEKVSHHPT 396
           K+GN LLR LNVAAFAVSGYAS+EGRHCKPFNPLLGETYEAD+PEKG+RFFSEKVSHHPT
Sbjct: 394 KSGNGLLRALNVAAFAVSGYASTEGRHCKPFNPLLGETYEADFPEKGIRFFSEKVSHHPT 453

Query: 397 VIACHCEGKGWKFWGDSNLRTKFWGRSIQLDPVGVLTVEFDDGEVFQWSKVTTSIYNLIL 456
           VIACHCEGKGWKFWGD+NLR+KFWGRSIQ++PVGVLT+EFDDGEVFQWSKVT++IYN+IL
Sbjct: 454 VIACHCEGKGWKFWGDTNLRSKFWGRSIQVEPVGVLTLEFDDGEVFQWSKVTSTIYNIIL 513

Query: 457 GKIYCDHHGTMEIHGNCQYSCKLKFKEQSILDRNPHQVNGFVEDVLGKKVATLFGKWDNS 516
           GK+YCDHHG M+I GN QYSC LKFKEQSIL+RNPHQVNGFVEDV G+K AT+FGKWD+S
Sbjct: 514 GKLYCDHHGVMQIRGNRQYSCTLKFKEQSILERNPHQVNGFVEDVAGQKAATIFGKWDDS 573

Query: 517 MYYISGDGSGKLKDGNVSPDASLLWKSNKAPLNLTRYNLTSFAITLNELTPGLQEKLPPT 576
           +YY++GDG  K K  + + +ASLLWK  K P N+TRYNLTSFAITLNELTPGLQE LPPT
Sbjct: 574 LYYVAGDGINKSKVSDPASNASLLWKRTKPPPNVTRYNLTSFAITLNELTPGLQEILPPT 633

Query: 577 DSRLRPDQRHLENGEYEKANAEKQRLERRQRMSRKLQENGWKPRWFRREGENGSFRYVGG 636
           DSRLRPDQRHLENGEYEKAN EKQRLERRQRMSR+LQE+GW+PRWF R+GE+ +F+Y GG
Sbjct: 634 DSRLRPDQRHLENGEYEKANLEKQRLERRQRMSRQLQESGWRPRWFERQGESDTFKYTGG 693

Query: 637 YWEAREQLKWDECPNIFGEFCEDV 660
           YWEAR    WD+CP+IFGEF E++
Sbjct: 694 YWEARGHRNWDDCPDIFGEFTEEL 717

May be involved in the transport of sterols.
Arabidopsis thaliana (taxid: 3702)

>sp\|Q9SU36\|ORP2B_ARATH Oxysterol-binding protein-related protein 2B OS=Arabidopsis thaliana GN=ORP2B PE=2 SV=2	Back alignment and function description

>sp\|Q8L751\|ORP1C_ARATH Oxysterol-binding protein-related protein 1C OS=Arabidopsis thaliana GN=ORP1C PE=2 SV=1	Back alignment and function description

>sp\|Q9SAF0\|ORP1D_ARATH Oxysterol-binding protein-related protein 1D OS=Arabidopsis thaliana GN=ORP1D PE=2 SV=1	Back alignment and function description

>sp\|O80866\|ORP1A_ARATH Oxysterol-binding protein-related protein 1A OS=Arabidopsis thaliana GN=ORP1A PE=2 SV=1	Back alignment and function description

>sp\|Q8S8P9\|ORP1B_ARATH Oxysterol-binding protein-related protein 1B OS=Arabidopsis thaliana GN=ORP1B PE=2 SV=1	Back alignment and function description

>sp\|Q9H4L5\|OSBL3_HUMAN Oxysterol-binding protein-related protein 3 OS=Homo sapiens GN=OSBPL3 PE=1 SV=1	Back alignment and function description

>sp\|Q9DBS9\|OSBL3_MOUSE Oxysterol-binding protein-related protein 3 OS=Mus musculus GN=Osbpl3 PE=1 SV=2	Back alignment and function description

>sp\|Q9BZF3\|OSBL6_HUMAN Oxysterol-binding protein-related protein 6 OS=Homo sapiens GN=OSBPL6 PE=1 SV=1	Back alignment and function description

>sp\|Q8BXR9\|OSBL6_MOUSE Oxysterol-binding protein-related protein 6 OS=Mus musculus GN=Osbpl6 PE=2 SV=1	Back alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Alignment Graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		666
224125020		737	predicted protein [Populus trichocarpa]	0.908	0.820	0.804	0.0
356497155		742	PREDICTED: oxysterol-binding protein-rel	0.890	0.799	0.774	0.0
356565347		744	PREDICTED: oxysterol-binding protein-rel	0.894	0.801	0.763	0.0
356513729		783	PREDICTED: oxysterol-binding protein-rel	0.890	0.757	0.763	0.0
356540514		739	PREDICTED: oxysterol-binding protein-rel	0.890	0.802	0.758	0.0
449459718		756	PREDICTED: oxysterol-binding protein-rel	0.912	0.804	0.733	0.0
224074681		679	predicted protein [Populus trichocarpa]	0.815	0.799	0.809	0.0
18415950		721	OSBP(oxysterol binding protein)-related	0.876	0.809	0.725	0.0
449529489		588	PREDICTED: oxysterol-binding protein-rel	0.878	0.994	0.739	0.0
297741168		724	unnamed protein product [Vitis vinifera]	0.881	0.810	0.746	0.0

>gi\|224125020\|ref\|XP_002329871.1\| predicted protein [Populus trichocarpa] gi\|222871108\|gb\|EEF08239.1\| predicted protein [Populus trichocarpa]	Back alignment and taxonomy information

 Score = 1052 bits (2721), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 513/638 (80%), Positives = 559/638 (87%), Gaps = 33/638 (5%)

Query: 30  AFGDLEGIISSFRESKSDDRRFYIFTATKTLHLRTNSRRDRVAWIQALVSTRSLYPLRTL 89
             G +   ISSFRESKSDDRRFYIFTATKTLHLRT+S+RDRVAWIQALVSTRSL+P R+L
Sbjct: 128 TVGTVHLKISSFRESKSDDRRFYIFTATKTLHLRTDSKRDRVAWIQALVSTRSLFPSRSL 187

Query: 90  NDGLSIVPKDLSISTVRLKKRLVDEGVGENLVKDCEQIMLSEFNEIQGQFKVLCEERSNL 149
           ND LS+V  DLSIST RLKKRL++EG+ ENLVKDCEQIMLSEF+E+QGQ KVLCEERSNL
Sbjct: 188 NDSLSLVSHDLSISTDRLKKRLLEEGINENLVKDCEQIMLSEFSEVQGQVKVLCEERSNL 247

Query: 150 LDTIRQLEAANIEADASGTPDGEYQLSKHEFSNLGRGKYSECSTTESSDDIEKQELEEVS 209
           LDT+RQLEAANIEA+ +G PDGEYQL+KHEFS+LGRGKYSE STTESSDDIEKQELEEVS
Sbjct: 248 LDTLRQLEAANIEAETAGIPDGEYQLTKHEFSSLGRGKYSEYSTTESSDDIEKQELEEVS 307

Query: 210 DDDEISFYDTREFFTEPSVSCRPVKEVTNHAREEEQLGNTFNTSEKMYDEKEKCDSRYPN 269
           D+D  SFYDT+E+FTEP+                                 E  +S YP+
Sbjct: 308 DEDGTSFYDTKEYFTEPT------------------------------SMTEAANSGYPH 337

Query: 270 IERRKKLPDPVEKERGVSLWSMIKDNVGKDLTRVCLPVYFNEPISSLQKCFEDLEYSYLL 329
           IERRKKLPDPVEKE+GVSLWSMIKDNVGKDLTRVCLPVYFNEPISSLQKCFEDLEYSYLL
Sbjct: 338 IERRKKLPDPVEKEKGVSLWSMIKDNVGKDLTRVCLPVYFNEPISSLQKCFEDLEYSYLL 397

Query: 330 DRAYEYGKAGNSLLRILNVAAFAVSGYASSEGRHCKPFNPLLGETYEADYPEKGVRFFSE 389
           DRAYE GKAGNS+LRILNVAAFA+SGYASSEGRHCKPFNPLLGETYEAD+P+KGVRFFSE
Sbjct: 398 DRAYECGKAGNSVLRILNVAAFAISGYASSEGRHCKPFNPLLGETYEADFPDKGVRFFSE 457

Query: 390 KVSHHPTVIACHCEGKGWKFWGDSNLRTKFWGRSIQLDPVGVLTVEFDDGEVFQWSKVTT 449
           KVSHHPT+IACHCEG+GWKFWGDSNLRTKFWGRSIQLDPVGVLTVEFDDGE+FQWSKVTT
Sbjct: 458 KVSHHPTLIACHCEGRGWKFWGDSNLRTKFWGRSIQLDPVGVLTVEFDDGEIFQWSKVTT 517

Query: 450 SIYNLILGKIYCDHHGTMEIHGNCQYSCKLKFKEQSILDRNPHQVNGFVEDVLGKKVATL 509
           +IYNLILGK+YCDHHG M I GN QYSCKLKFKEQSILDRNPHQV GFVEDV G KVA+L
Sbjct: 518 TIYNLILGKVYCDHHGMMHIQGNRQYSCKLKFKEQSILDRNPHQVQGFVEDVSGNKVASL 577

Query: 510 FGKWDNSMYYISGDGSGKLKDGNVSPDASLLWKSNKAPLNLTRYNLTSFAITLNELTPGL 569
           FGKWD+SM+Y +GDG+GK KD   S +A+LLWKSNK P NLTRYNL+SFAITLNELTPGL
Sbjct: 578 FGKWDDSMHYTTGDGTGKSKDRITSSNATLLWKSNKPPPNLTRYNLSSFAITLNELTPGL 637

Query: 570 Q--EKLPPTDSRLRPDQRHLENGEYEKANAEKQRLERRQRMSRKLQENGWKPRWFRREGE 627
           Q  EKLPPTDSRLRPDQRHLENGEYEKAN EKQRLE+RQRMSRKLQE+GWKPRWF++EGE
Sbjct: 638 QIKEKLPPTDSRLRPDQRHLENGEYEKANGEKQRLEKRQRMSRKLQEHGWKPRWFQKEGE 697

Query: 628 NGSFRYVGGYWEAREQLKWDECPNIFGEFCED-VHSSE 664
           NGSFRYVGGYWEARE+  WD CPNIFGEF E+ V SSE
Sbjct: 698 NGSFRYVGGYWEARERGNWDGCPNIFGEFNEELVESSE 735

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi\|356497155\|ref\|XP_003517428.1\| PREDICTED: oxysterol-binding protein-related protein 2A-like [Glycine max]	Back alignment and taxonomy information

>gi\|356565347\|ref\|XP_003550903.1\| PREDICTED: oxysterol-binding protein-related protein 2A-like [Glycine max]	Back alignment and taxonomy information

>gi\|356513729\|ref\|XP_003525563.1\| PREDICTED: oxysterol-binding protein-related protein 2A-like [Glycine max]	Back alignment and taxonomy information

>gi\|356540514\|ref\|XP_003538733.1\| PREDICTED: oxysterol-binding protein-related protein 2A-like [Glycine max]	Back alignment and taxonomy information

>gi\|449459718\|ref\|XP_004147593.1\| PREDICTED: oxysterol-binding protein-related protein 2A-like [Cucumis sativus]	Back alignment and taxonomy information

>gi\|224074681\|ref\|XP_002304422.1\| predicted protein [Populus trichocarpa] gi\|222841854\|gb\|EEE79401.1\| predicted protein [Populus trichocarpa]	Back alignment and taxonomy information

>gi|18415950|ref|NP_567662.1| OSBP(oxysterol binding protein)-related protein 2A [Arabidopsis thaliana] gi|75163969|sp|Q940Y1.1|ORP2A_ARATH RecName: Full=Oxysterol-binding protein-related protein 2A; AltName: Full=OSBP-related protein 2A gi|15450519|gb|AAK96552.1| AT4g22540/F7K2_120 [Arabidopsis thaliana] gi|24111447|gb|AAN46892.1| At4g22540/F7K2_120 [Arabidopsis thaliana] gi|332659220|gb|AEE84620.1| OSBP(oxysterol binding protein)-related protein 2A [Arabidopsis thaliana]

Back alignment and taxonomy information

>gi\|449529489\|ref\|XP_004171732.1\| PREDICTED: oxysterol-binding protein-related protein 2A-like, partial [Cucumis sativus]	Back alignment and taxonomy information

>gi\|297741168\|emb\|CBI31899.3\| unnamed protein product [Vitis vinifera]	Back alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Alignment graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		666
TAIR\|locus:2135580		693	ORP2B "OSBP(oxysterol binding	0.635	0.610	0.751	2e-250
TAIR\|locus:2132492		814	ORP1C "OSBP(oxysterol binding	0.980	0.802	0.591	2.9e-213
TAIR\|locus:2052801		760	ORP1A "OSBP(oxysterol binding	0.909	0.797	0.594	3.9e-202
TAIR\|locus:2127565		721	ORP2A "OSBP(oxysterol binding	0.731	0.675	0.691	1.7e-187
TAIR\|locus:2052816		489	ORP1B "OSBP(oxysterol binding	0.618	0.842	0.680	2.7e-164
UNIPROTKB\|E1BQU1		933	OSBPL6 "Oxysterol-binding prot	0.627	0.448	0.396	1.2e-81
UNIPROTKB\|F1NF23		962	OSBPL6 "Oxysterol-binding prot	0.627	0.434	0.396	1.2e-81
UNIPROTKB\|I3L7E7		969	OSBPL6 "Oxysterol-binding prot	0.533	0.366	0.433	2.5e-81
RGD\|1308887		1002	Osbpl6 "oxysterol binding prot	0.533	0.354	0.436	3.1e-81
UNIPROTKB\|D4A0F3		934	Osbpl6 "Oxysterol-binding prot	0.533	0.380	0.436	3.1e-81

TAIR\|locus:2135580 ORP2B "OSBP(oxysterol binding protein)-related protein 2B" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

 Score = 1798 (638.0 bits), Expect = 2.0e-250, Sum P(2) = 2.0e-250
 Identities = 326/434 (75%), Positives = 376/434 (86%)

Query:   227 SVSCRPVKEVTNHAREEEQLGNTFNTSEKMYDEKEKCDSRYPNIERRKKLPDPVEKERGV 286
             S S    +E  + + E+E    +F+ +++ + E +   S   + +RR KLPDP EKERGV
Sbjct:   267 SASSDDKQEFEDISEEDEA---SFHDTKESFGEPD-VGSVLTHFKRRTKLPDPAEKERGV 322

Query:   287 SLWSMIKDNVGKDLTRVCLPVYFNEPISSLQKCFEDLEYSYLLDRAYEYGKAGNSLLRIL 346
             SLWSMIKDNVGKDLTRVCLPVYFNEPISSLQKCFEDLEYSYLLD+AYEYGK+G SLLR L
Sbjct:   323 SLWSMIKDNVGKDLTRVCLPVYFNEPISSLQKCFEDLEYSYLLDQAYEYGKSGKSLLRAL 382

Query:   347 NVAAFAVSGYASSEGRHCKPFNPLLGETYEADYPEKGVRFFSEKVSHHPTVIACHCEGKG 406
             NVAAFAVSGYAS+EGRHCKPFNPLLGETYEAD+PEKG+RFFSEKVSHHPTVIACHCEGKG
Sbjct:   383 NVAAFAVSGYASTEGRHCKPFNPLLGETYEADFPEKGIRFFSEKVSHHPTVIACHCEGKG 442

Query:   407 WKFWGDSNLRTKFWGRSIQLDPVGVLTVEFDDGEVFQWSKVTTSIYNLILGKIYCDHHGT 466
             WKFWGD+NLR+KFWGRSIQL+PVG+LT+EFDDGE+FQWSKVTT+IYN++LGK+YCDHHG 
Sbjct:   443 WKFWGDTNLRSKFWGRSIQLEPVGILTLEFDDGEIFQWSKVTTTIYNILLGKLYCDHHGI 502

Query:   467 MEIHGNCQYSCKLKFKEQSILDRNPHQVNGFVEDVLGKKVATLFGKWDNSMYYISGDGSG 526
             M+I GN QYSC LKFKEQSILDRNPHQVNGFVEDV GKK AT+FGKW++S+YY++GDG  
Sbjct:   503 MKIRGNRQYSCMLKFKEQSILDRNPHQVNGFVEDVTGKKAATVFGKWNDSLYYVAGDGIN 562

Query:   527 KLKDGNVSPDASLLWKSNKAPLNLTRYNLTSFAITLNELTPGLQEKLPPTDSRLRPDQRH 586
             K         ASLLWK+ KAP N+TRYN TSFA+TLNEL PGL+EKLPPTDSRLRPDQRH
Sbjct:   563 KAS-------ASLLWKATKAPPNVTRYNFTSFAMTLNELIPGLEEKLPPTDSRLRPDQRH 615

Query:   587 LENGEYEKANAEKQRLERRQRMSRKLQENGWKPRWFRREGENGSFRYVGGYWEAREQLKW 646
             LENGEYEKAN EKQRLERRQRMSR++QE+GW+PRWF  +GE+ S++Y GGYWEAR+   W
Sbjct:   616 LENGEYEKANEEKQRLERRQRMSRQIQESGWRPRWFEPQGESESYKYTGGYWEARDVKSW 675

Query:   647 DECPNIFGEFCEDV 660
             D+CPNIFGEF E+V
Sbjct:   676 DDCPNIFGEFTEEV 689

GO:0005543 "phospholipid binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0005886 "plasma membrane" evidence=ISM

GO:0008142 "oxysterol binding" evidence=ISS

GO:0008202 "steroid metabolic process" evidence=ISS

TAIR\|locus:2132492 ORP1C "OSBP(oxysterol binding protein)-related protein 1C" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2052801 ORP1A "OSBP(oxysterol binding protein)-related protein 1A" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2127565 ORP2A "OSBP(oxysterol binding protein)-related protein 2A" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2052816 ORP1B "OSBP(oxysterol binding protein)-related protein 1B" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

UNIPROTKB\|E1BQU1 OSBPL6 "Oxysterol-binding protein" [Gallus gallus (taxid:9031)]	Back alignment and assigned GO terms

UNIPROTKB\|F1NF23 OSBPL6 "Oxysterol-binding protein" [Gallus gallus (taxid:9031)]	Back alignment and assigned GO terms

UNIPROTKB\|I3L7E7 OSBPL6 "Oxysterol-binding protein" [Sus scrofa (taxid:9823)]	Back alignment and assigned GO terms

RGD\|1308887 Osbpl6 "oxysterol binding protein-like 6" [Rattus norvegicus (taxid:10116)]	Back alignment and assigned GO terms

UNIPROTKB\|D4A0F3 Osbpl6 "Oxysterol-binding protein" [Rattus norvegicus (taxid:10116)]	Back alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9SU36	ORP2B_ARATH	No assigned EC number	0.7147	0.8693	0.8354	no	no
Q940Y1	ORP2A_ARATH	No assigned EC number	0.7259	0.8768	0.8099	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	estExt_Genewise1_v1.C_1270201	hypothetical protein (738 aa)
		(Populus trichocarpa)
Predicted Functional Partners:
		Sorry, there are no predicted associations at the current settings.

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Alignment Graph	Length	Definition	E-value
Query		666
pfam01237		335	pfam01237, Oxysterol_BP, Oxysterol-binding protein	1e-146
cd13294		100	cd13294, PH_ORP_plant, Plant Oxysterol binding pro	2e-21

>gnl\|CDD\|216381 pfam01237, Oxysterol_BP, Oxysterol-binding protein	Back alignment and domain information

 Score =  428 bits (1102), Expect = e-146
 Identities = 160/346 (46%), Positives = 208/346 (60%), Gaps = 22/346 (6%)

Query: 306 PVYFNEPISSLQKCFEDLEYSYLLDRAYEYGKAGNSLLRILNVAAFAVSGYASSE-GRHC 364
           PV+FNEP+S LQ+  EDLEY  LLD+A    K  + L R+L VAAFAVS Y+S+   R  
Sbjct: 1   PVFFNEPLSLLQRLAEDLEYPDLLDKA---AKEDDPLERMLYVAAFAVSTYSSTRKRRTK 57

Query: 365 KPFNPLLGETYEADYPEKGVRFFSEKVSHHPTVIACHCEGKGWKFWGDSNLRTKFWGRSI 424
           KPFNPLLGET+E    + G RF SE+VSHHP + A H E KGW  WG S  ++KFWG+SI
Sbjct: 58  KPFNPLLGETFELVREDGGFRFISEQVSHHPPISAYHAESKGWTLWGSSAPKSKFWGKSI 117

Query: 425 QLDPVGVLTVEFDD-GEVFQWSKVTTSIYNLILGKIYCDHHGTMEIHG-NCQYSCKLKFK 482
           ++ P G   +     GE + W+K TT I+N+I GK Y + +G M I      Y   ++FK
Sbjct: 118 EVKPEGHAHLTLKKTGEHYTWTKPTTHIHNIIFGKPYVELYGEMYIKNSTTGYKAVIEFK 177

Query: 483 EQSILDRNPHQVNGFVEDVLGKKVATLFGKWDNSMYYISGDGSGKLKDGNVSPDASLLWK 542
           ++       ++V G V D  GK + T+ GKW+ S+Y      S        + +  LLWK
Sbjct: 178 KKGWFSGRKNEVEGKVYDKKGKVLYTISGKWNESLYIKKVKSS--------TGEKKLLWK 229

Query: 543 SNKAP-LNLTRYNLTSFAITLNELTPGLQEKLPPTDSRLRPDQRHLENGEYEKANAEKQR 601
           +N  P  +   Y  T FAI LNELTP L+E+LPPTDSRLRPDQR LE G+Y++A  EK R
Sbjct: 230 ANPLPPNSEKVYGFTKFAIPLNELTPELKEELPPTDSRLRPDQRALEEGDYDEAEEEKLR 289

Query: 602 LERRQRMSRKLQENG---WKPRWFRREGE----NGSFRYVGGYWEA 640
           LE +QR  RK +E     WKPRWF +  +       + Y GGYWE 
Sbjct: 290 LEEKQRERRKEREEKGEEWKPRWFVKVKDPLTGEEDWVYKGGYWER 335

Length = 335

>gnl\|CDD\|241448 cd13294, PH_ORP_plant, Plant Oxysterol binding protein related protein Pleckstrin homology (PH) domain	Back alignment and domain information

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Alignment Graph	Length	Definition	Probability
Query		666
KOG1737		799	consensus Oxysterol-binding protein [Lipid transpo	100.0
KOG2209		445	consensus Oxysterol-binding protein [Signal transd	100.0
PF01237		354	Oxysterol_BP: Oxysterol-binding protein ; InterPro	100.0
KOG2210		392	consensus Oxysterol-binding protein [Signal transd	100.0
cd01247		91	PH_GPBP Goodpasture antigen binding protein (GPBP)	99.46
PF15409		89	PH_8: Pleckstrin homology domain	99.4
cd01265		95	PH_PARIS-1 PARIS-1 pleckstrin homology (PH) domain	99.34
cd01238		106	PH_Tec Tec pleckstrin homology (PH) domain. Tec pl	99.08
cd01246		91	PH_oxysterol_bp Oxysterol binding protein (OSBP) P	98.96
PF15413		112	PH_11: Pleckstrin homology domain; PDB: 3MDB_D 3FE	98.91
cd01235		101	PH_SETbf Set binding factor Pleckstrin Homology (P	98.88
cd01251		103	PH_centaurin_alpha Centaurin alpha Pleckstrin homo	98.87
cd01244		98	PH_RasGAP_CG9209 RAS_GTPase activating protein (GA	98.86
cd01233		100	Unc104 Unc-104 pleckstrin homology (PH) domain. Un	98.85
cd01264		101	PH_melted Melted pleckstrin homology (PH) domain.	98.64
cd01250		94	PH_centaurin Centaurin Pleckstrin homology (PH) do	98.62
cd01257		101	PH_IRS Insulin receptor substrate (IRS) pleckstrin	98.62
cd01236		104	PH_outspread Outspread Pleckstrin homology (PH) do	98.56
cd01260		96	PH_CNK Connector enhancer of KSR (Kinase suppresso	98.54
cd01219		101	PH_FGD FGD (faciogenital dysplasia protein) plecks	98.52
KOG1739		611	consensus Serine/threonine protein kinase GPBP [Si	98.5
cd01266		108	PH_Gab Gab (Grb2-associated binder) pleckstrin hom	98.46
cd01252		125	PH_cytohesin Cytohesin Pleckstrin homology (PH) do	98.43
PF00169		104	PH: PH domain; InterPro: IPR001849 The pleckstrin	98.39
cd01237		106	Unc112 Unc-112 pleckstrin homology (PH) domain. Un	98.32
smart00233		102	PH Pleckstrin homology domain. Domain commonly fou	98.19
cd01220		99	PH_CDEP Chondrocyte-derived ezrin-like domain cont	98.13
cd00821		96	PH Pleckstrin homology (PH) domain. Pleckstrin hom	98.05
cd01254		121	PH_PLD Phospholipase D (PLD) pleckstrin homology (	98.01
cd01241		102	PH_Akt Akt pleckstrin homology (PH) domain. Akt pl	97.98
cd01245		98	PH_RasGAP_CG5898 RAS GTPase-activating protein (GA	97.84
cd01253		104	PH_beta_spectrin Beta-spectrin pleckstrin homology	97.77
cd01218		104	PH_phafin2 Phafin2 Pleckstrin Homology (PH) domain	97.68
cd01263		122	PH_anillin Anillin Pleckstrin homology (PH) domain	97.63
cd00900		99	PH-like Pleckstrin homology-like domain. Pleckstri	97.58
PF14593		104	PH_3: PH domain; PDB: 1W1H_D 1W1D_A 1W1G_A 2VKI_A.	97.43
cd01261		112	PH_SOS Son of Sevenless (SOS) Pleckstrin homology	97.28
cd01222		97	PH_clg Clg (common-site lymphoma/leukemia guanine	97.25
cd01249		104	PH_oligophrenin Oligophrenin Pleckstrin homology (	96.92
cd01230		117	PH_EFA6 EFA6 Pleckstrin Homology (PH) domain. EFA6	96.47
cd01262		89	PH_PDK1 3-Phosphoinositide dependent protein kinas	96.4
PF15406		112	PH_6: Pleckstrin homology domain	96.33
cd01232		114	PH_TRIO Trio pleckstrin homology (PH) domain. Trio	95.44
cd01221		125	PH_ephexin Ephexin Pleckstrin homology (PH) domain	95.13
KOG0930		395	consensus Guanine nucleotide exchange factor Cytoh	94.39
cd01224		109	PH_Collybistin Collybistin pleckstrin homology (PH	94.13
KOG0521		785	consensus Putative GTPase activating proteins (GAP	93.92
cd01248		115	PH_PLC Phospholipase C (PLC) pleckstrin homology (	93.5
KOG1090		1732	consensus Predicted dual-specificity phosphatase [	93.26
cd01227		133	PH_Dbs Dbs (DBL's big sister) pleckstrin homology	93.25
cd01226		100	PH_exo84 Exocyst complex 84-kDa subunit Pleckstrin	91.56
PF12814		123	Mcp5_PH: Meiotic cell cortex C-terminal pleckstrin	91.34
cd01228		96	PH_BCR-related BCR (breakpoint cluster region)-rel	89.31
PTZ00267		478	NIMA-related protein kinase; Provisional	87.97
cd01223		116	PH_Vav Vav pleckstrin homology (PH) domain. Vav pl	87.88
KOG0705		749	consensus GTPase-activating protein Centaurin gamm	87.64
KOG4424		623	consensus Predicted Rho/Rac guanine nucleotide exc	86.73
KOG0690		516	consensus Serine/threonine protein kinase [Signal	85.85
cd01242		112	PH_ROK Rok (Rho- associated kinase) pleckstrin hom	84.82
PF15410		119	PH_9: Pleckstrin homology domain; PDB: 1WJM_A 1BTN	83.59
cd01256		110	PH_dynamin Dynamin pleckstrin homology (PH) domain	83.41
cd01243		122	PH_MRCK MRCK (myotonic dystrophy-related Cdc42-bin	81.81

>KOG1737 consensus Oxysterol-binding protein [Lipid transport and metabolism]	Back alignment and domain information

Probab=100.00  E-value=1e-114  Score=985.46  Aligned_cols=628  Identities=38%  Similarity=0.592  Sum_probs=503.3

Q ss_pred             cccceeeeeeeecCCCceeEEeccCC---ccc------------------------------------------eeEEee
Q 042453            3 IEDEKLRIFFELLTLPGSHFLSSVGS---LAF------------------------------------------GDLEGI   37 (666)
Q Consensus         3 ~~~~~~~~~~~~~~~~~l~y~~~~~~---~~~------------------------------------------G~i~L~   37 (666)
                      +.||.=|.||+.  .+.|+||.-.+.   ..+                                          +.+||+
T Consensus        90 ~~~~~~r~f~l~--~g~ls~~~~~~~~~~~~~~~~~~~~a~i~~~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~l~  167 (799)
T KOG1737|consen   90 SKGPSSRWFVLS--GGLLSYYFDNSFSKTTCGGGINLVTAWIQNGERMDICSVDGSCQIYLVELSKKLQRQGWLHALELA  167 (799)
T ss_pred             cCCcccceEEec--CcceeeeccCCccccCCCCcccccccccccCCCcccchhhcccchhhhhhhHHHhhcchhhhhhhc
Confidence            457778888887  888999864441   111                                          225555


Q ss_pred             -eeEEeecCCCCccEEEEeCCcEEEEEcCC---h-hhHHHHHHHHHHHhHhCCccc-cCCCCccCCCcccc---------
Q 042453           38 -ISSFRESKSDDRRFYIFTATKTLHLRTNS---R-RDRVAWIQALVSTRSLYPLRT-LNDGLSIVPKDLSI---------  102 (666)
Q Consensus        38 -~a~i~~~~~d~~~f~i~~~~~~~~lra~~---~-~~r~~Wi~al~~~~~~~~~~~-~~~~~~~~~~~~~~---------  102 (666)
                       ..+++.. .+..++.+++.+++.|++...   . +.|..|+++|+.++...++.. .+.....+..+...         
T Consensus       168 ~~~~~~~~-s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~~~~~~~~~~s~s~~k~  246 (799)
T KOG1737|consen  168 PLIAVEQT-SEYENENKSVMTKRIPLSIAVISVAQETREINVDVLRLLSSLPNLTGQLLLRELNALLEDKKEQSSSKSKL  246 (799)
T ss_pred             cchhhhcc-ccccccccccccccccchhhhhcccccchhhhhhhhhhccccccchhhhhhhhhccccccccccccchhhh
Confidence             5566666 889999999999999999885   3 789999999999999988643 11112211222222         


Q ss_pred             --cHHHHHHhhhhcccchhhHHHHHHHHhhhHHHhhhHHHHHHHHHHHHHHHHHhHHHhccccCccCCCCCccccccccc
Q 042453          103 --STVRLKKRLVDEGVGENLVKDCEQIMLSEFNEIQGQFKVLCEERSNLLDTIRQLEAANIEADASGTPDGEYQLSKHEF  180 (666)
Q Consensus       103 --s~~~l~~rl~e~~~~~~~ik~~e~~~~~e~~~~~~~~~~~~~~~~~lld~l~~le~~~~~~~~t~~~~~~~~~~~~~~  180 (666)
                        .++++..|++..++....+++||+++++++...|.++....+++..|++++++|+..+.+++..+......+......
T Consensus       247 ~~~~e~~~~k~~~s~~s~~a~~~~e~~~~s~~~~~s~~s~~~~~q~~~l~~~l~~le~q~~~le~a~~~~~~~~~~~~~~  326 (799)
T KOG1737|consen  247 QERTERIALKVLTSLASVFAECDDEAELLSQSRIESDASHSESEQRIRLQEALSALENQNTDLEVALRRAHAAQAALDLS  326 (799)
T ss_pred             HHHHHHHHHHHhhhhHHHHhHHHHHHHHHHHhHhhhhhhcchhhhhhhhhhHHHHHHhhhhhHHHHHhHhhhhhhccCcc
Confidence              367889999999999999999999999999999999999999999999999999988777655544333222211000


Q ss_pred             cccCCCcCCCCCcCCCCccccccccccccCccccccccccCccCC---CCCccc---Cc-cccc-ccchhhhhhcccc-c
Q 042453          181 SNLGRGKYSECSTTESSDDIEKQELEEVSDDDEISFYDTREFFTE---PSVSCR---PV-KEVT-NHAREEEQLGNTF-N  251 (666)
Q Consensus       181 ~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~e~~f~da~~~~~~---~~~~~~---~~-~~~~-~~~~~~~~~~~~~-~  251 (666)
                      .         .+. . +.++  .+...+.++++.+||||.+..+.   +..+..   .. ++.. .-.+..+..+..- .
T Consensus       327 ~---------~~~-~-~~~~--~~~~~~~~~e~~e~~da~s~~s~~~~~~~s~~~~e~~~s~~~~s~~s~~~~~~~~~~~  393 (799)
T KOG1737|consen  327 K---------VTR-L-SLLH--EEESFSESDELTEQFDAESSLSDAQESLDSNSESENEGSEDEESYTSDISDNGSSDAL  393 (799)
T ss_pred             c---------ccc-c-cccc--cccccccccccccccccccccchhhhccCCcccccccccccccccccccccCCCcccc
Confidence            0         000 0 0010  12233334556789999886531   000100   00 0000 0000000000000 0


Q ss_pred             CCcccccc----ccccCCCCCCccccccCCCcccccccchhHHHhhhccCCCCccccccccccccCChhhhhhhcccchH
Q 042453          252 TSEKMYDE----KEKCDSRYPNIERRKKLPDPVEKERGVSLWSMIKDNVGKDLTRVCLPVYFNEPISSLQKCFEDLEYSY  327 (666)
Q Consensus       252 ~~~~~~~~----~~~~~~~~~~~~~R~~lP~~~e~~~~vslwsilK~~iGkDLtkIslPv~~~EP~S~LQr~~e~~ey~~  327 (666)
                      ..+.....    .......++..+||++||+|..++.+++||+|||++||||||+|+|||.||||+|+|||++|+|||++
T Consensus       394 ~~d~~~~~~~~~~~~~~~~~~~~~rr~~lp~~~~~~~~islw~~~k~~iGkDlskv~~PV~~nEP~S~LQr~~EdlEYs~  473 (799)
T KOG1737|consen  394 SADGDKSSQALNEKVPSGSGAEVARRTNLPAPSKPSSSISLWSILRNNIGKDLSKVSMPVEFNEPLSLLQRVAEDLEYSE  473 (799)
T ss_pred             ccccccccccccccccccccccccccccCCCCcCcCCCccHHHHHhhcccccccccccceecCCcchHHHHhhhhccchh
Confidence            00000000    00001125567999999999889999999999999999999999999999999999999999999999


Q ss_pred             hHHHHhhcCCCCCHHHHHHHHHHHHHhhhcccCCCCCCCCCCCCCCeEEEEecCCCeEEEeeecccCCceeeEEEeCCcE
Q 042453          328 LLDRAYEYGKAGNSLLRILNVAAFAVSGYASSEGRHCKPFNPLLGETYEADYPEKGVRFFSEKVSHHPTVIACHCEGKGW  407 (666)
Q Consensus       328 lLd~Aa~~~~~~dp~eRm~~V~aF~vS~y~~~~~r~kKPfNPILGETFe~~~~d~g~rfiaEQVSHHPPIsAf~~e~~g~  407 (666)
                      |||+|++   .+||++||++|+||++|+|+.+..|.+|||||||||||||+++|+|+|||+|||||||||+|||||+++|
T Consensus       474 LLd~A~~---~~d~~~R~~~vaafavS~Ya~t~~r~~KPFNPlLgETyE~~r~dkg~rf~sEqVSHhPPi~A~h~es~~w  550 (799)
T KOG1737|consen  474 LLDKAAN---YEDPLERMVYVAAFAVSSYSSTSRRTAKPFNPLLGETYEMDRPDKGLRFFSEQVSHHPPISACHAESNNW  550 (799)
T ss_pred             hhHHHHh---cCCcHHHHHHHHHHHhhhcchhcccccCCCCcccccceEeeccCCceeeeeeeeccCCCcccccccCCCc
Confidence            9999998   4689999999999999999988899999999999999999999999999999999999999999999999


Q ss_pred             EEEEEeeeeEEEEEeEEEEEEeeEEEEEecC-CcEEEEeeeeeeeeeeeeceeeEeecceEEEEcCCcc--eEEEeeeec
Q 042453          408 KFWGDSNLRTKFWGRSIQLDPVGVLTVEFDD-GEVFQWSKVTTSIYNLILGKIYCDHHGTMEIHGNCQY--SCKLKFKEQ  484 (666)
Q Consensus       408 ~~~G~~~~kskF~G~Si~v~~~G~~~l~f~~-gE~Y~~~~p~~~i~nli~G~~~ie~~G~~~I~~~tg~--~a~i~Fk~k  484 (666)
                      .|||++.+++||||+||+|.|.|.++|+|++ |++|+|.+|+++|+|||+|++|+|++|.|.|++++.+  .|.|+|++.
T Consensus       551 ~~~~ds~~~sKF~Gksi~v~P~G~l~l~~~~~G~~~~w~kvtt~v~nii~Gk~~~D~~ge~~i~n~~~~~~~c~L~F~~~  630 (799)
T KOG1737|consen  551 TFWGDSKVKSKFWGKSIEVPPLGILHVTLKNIGEHYSWAKVTTTVHNIILGKLWVDHYGEMEITNHTTGSDKCKLKFVKA  630 (799)
T ss_pred             eeeccccccccccccceeecCCceEEEEEcCCCccccccCccceecceeeccccccccccEEEecCCCCcceeEEEEeee
Confidence            9999999999999999999999999999997 9999999999999999999999999999999998544  599999999


Q ss_pred             ccccCCCceEEEEEEccCCcEEEEEEeEECceEEEEeCCCCCcccCCCCCCCCeeEeecCCCCccccccccccceeeccc
Q 042453          485 SILDRNPHQVNGFVEDVLGKKVATLFGKWDNSMYYISGDGSGKLKDGNVSPDASLLWKSNKAPLNLTRYNLTSFAITLNE  564 (666)
Q Consensus       485 ~~~g~~~~~V~G~I~d~~gk~~~~i~G~Wd~~i~~~~~~~~~k~k~~~~~~~~~~lW~~~~~~~~~~~y~~t~fa~~LNe  564 (666)
                      |||+++.++|.|.|+|.+|++++++.|+|++.|++..++..+   ...+.....++|++++.|++ .+|+||.||++||+
T Consensus       631 ~~~~~~~~ev~g~V~~~s~~~~~~l~GkW~e~~~~~~~~~~~---~~~~~~~~~~iWk~~~~Pkn-~~y~ft~fai~LNe  706 (799)
T KOG1737|consen  631 GYFSRNAREVEGSVRNKSGKKVEVLTGKWDESLYYFKVDKVG---LPEPETSEKLIWKANDLPKN-NKYNFTGFAIELNE  706 (799)
T ss_pred             cccCCCcceeEEEEeCCCCceeEEEeeeehhhhhhccccccc---cccCCccceeeeecCCCCCC-cccccchhheeccc
Confidence            999999999999999999999999999999999997665432   22334567899999999998 89999999999999


Q ss_pred             CCccccCCCCCCCCCChhhhhhhhcCChhHHHHHHHHHHHHHHHHHHhhc---CCCCcceeEecCCCC-eeEEcCChhhh
Q 042453          565 LTPGLQEKLPPTDSRLRPDQRHLENGEYEKANAEKQRLERRQRMSRKLQE---NGWKPRWFRREGENG-SFRYVGGYWEA  640 (666)
Q Consensus       565 l~p~l~~~l~PTDSR~RpD~raLe~Gd~d~A~~eK~rLEekQR~~RK~re---~~w~Pr~F~~~~~~~-~w~y~g~Ywe~  640 (666)
                      ++|.+.+.|||||||+|||||+||+|+|++|+.||.||||+||++|+.|+   ..|+||||.+..+.. .|+|+|+|||+
T Consensus       707 l~p~l~~~lpPTDSRlRPDqr~lE~G~~~~a~~EK~rlEe~QR~~r~~re~~~~~~~prwF~~~~~~~~~~~~ng~Ywe~  786 (799)
T KOG1737|consen  707 LTPHLKKLLPPTDSRLRPDQRALENGEYDEANAEKLRLEEKQRARRRKREENGEEYEPRWFEKVKDPSTYWVYNGGYWEA  786 (799)
T ss_pred             CCchhhccCCCCCcccCcchhhhhccChhhhhhhhHhHHHHHHHHHHHHHhhccccccccccccCCCcceEEecCchhee
Confidence            99999999999999999999999999999999999999999999988765   359999999998765 79999999999


Q ss_pred             hhcCCCCCCCCcc
Q 042453          641 REQLKWDECPNIF  653 (666)
Q Consensus       641 r~~~~w~~~~dif  653 (666)
                      |++++|..|+|||
T Consensus       787 r~~~d~~~~~~if  799 (799)
T KOG1737|consen  787 REKQDWKDCPDIF  799 (799)
T ss_pred             ecccCccccccCC
Confidence            9999999999998

>KOG2209 consensus Oxysterol-binding protein [Signal transduction mechanisms]	Back alignment and domain information

>PF01237 Oxysterol_BP: Oxysterol-binding protein ; InterPro: IPR000648 A number of eukaryotic proteins that seem to be involved with sterol synthesis and/or its regulation have been found [] to be evolutionary related	Back alignment and domain information

>KOG2210 consensus Oxysterol-binding protein [Signal transduction mechanisms]	Back alignment and domain information

>cd01247 PH_GPBP Goodpasture antigen binding protein (GPBP) Pleckstrin homology (PH) domain	Back alignment and domain information

>PF15409 PH_8: Pleckstrin homology domain	Back alignment and domain information

>cd01265 PH_PARIS-1 PARIS-1 pleckstrin homology (PH) domain	Back alignment and domain information

>cd01238 PH_Tec Tec pleckstrin homology (PH) domain	Back alignment and domain information

>cd01246 PH_oxysterol_bp Oxysterol binding protein (OSBP) Pleckstrin homology (PH) domain	Back alignment and domain information

>PF15413 PH_11: Pleckstrin homology domain; PDB: 3MDB_D 3FEH_A 3LJU_X 3FM8_C	Back alignment and domain information

>cd01235 PH_SETbf Set binding factor Pleckstrin Homology (PH) domain	Back alignment and domain information

>cd01251 PH_centaurin_alpha Centaurin alpha Pleckstrin homology (PH) domain	Back alignment and domain information

>cd01244 PH_RasGAP_CG9209 RAS_GTPase activating protein (GAP)_CG9209 pleckstrin homology (PH) domain	Back alignment and domain information

>cd01233 Unc104 Unc-104 pleckstrin homology (PH) domain	Back alignment and domain information

>cd01264 PH_melted Melted pleckstrin homology (PH) domain	Back alignment and domain information

>cd01250 PH_centaurin Centaurin Pleckstrin homology (PH) domain	Back alignment and domain information

>cd01257 PH_IRS Insulin receptor substrate (IRS) pleckstrin homology (PH) domain	Back alignment and domain information

>cd01236 PH_outspread Outspread Pleckstrin homology (PH) domain	Back alignment and domain information

>cd01260 PH_CNK Connector enhancer of KSR (Kinase suppressor of ras) (CNK) pleckstrin homology (PH) domain	Back alignment and domain information

>cd01219 PH_FGD FGD (faciogenital dysplasia protein) pleckstrin homology (PH) domain	Back alignment and domain information

>KOG1739 consensus Serine/threonine protein kinase GPBP [Signal transduction mechanisms; Defense mechanisms]	Back alignment and domain information

>cd01266 PH_Gab Gab (Grb2-associated binder) pleckstrin homology (PH) domain	Back alignment and domain information

>cd01252 PH_cytohesin Cytohesin Pleckstrin homology (PH) domain	Back alignment and domain information

>PF00169 PH: PH domain; InterPro: IPR001849 The pleckstrin homology (PH) domain is a domain of about 100 residues that occurs in a wide range of proteins involved in intracellular signalling or as constituents of the cytoskeleton [, , , , , , ]	Back alignment and domain information

>cd01237 Unc112 Unc-112 pleckstrin homology (PH) domain	Back alignment and domain information

>smart00233 PH Pleckstrin homology domain	Back alignment and domain information

>cd01220 PH_CDEP Chondrocyte-derived ezrin-like domain containing protein (CDEP) Pleckstrin homology (PH) domain	Back alignment and domain information

>cd00821 PH Pleckstrin homology (PH) domain	Back alignment and domain information

>cd01254 PH_PLD Phospholipase D (PLD) pleckstrin homology (PH) domain	Back alignment and domain information

>cd01241 PH_Akt Akt pleckstrin homology (PH) domain	Back alignment and domain information

>cd01245 PH_RasGAP_CG5898 RAS GTPase-activating protein (GAP) CG5898 Pleckstrin homology (PH) domain	Back alignment and domain information

>cd01253 PH_beta_spectrin Beta-spectrin pleckstrin homology (PH) domain	Back alignment and domain information

>cd01218 PH_phafin2 Phafin2 Pleckstrin Homology (PH) domain	Back alignment and domain information

>cd01263 PH_anillin Anillin Pleckstrin homology (PH) domain	Back alignment and domain information

>cd00900 PH-like Pleckstrin homology-like domain	Back alignment and domain information

>PF14593 PH_3: PH domain; PDB: 1W1H_D 1W1D_A 1W1G_A 2VKI_A	Back alignment and domain information

>cd01261 PH_SOS Son of Sevenless (SOS) Pleckstrin homology (PH) domain	Back alignment and domain information

>cd01222 PH_clg Clg (common-site lymphoma/leukemia guanine nucleotide exchange factor) pleckstrin homology (PH) domain	Back alignment and domain information

>cd01249 PH_oligophrenin Oligophrenin Pleckstrin homology (PH) domain	Back alignment and domain information

>cd01230 PH_EFA6 EFA6 Pleckstrin Homology (PH) domain	Back alignment and domain information

>cd01262 PH_PDK1 3-Phosphoinositide dependent protein kinase 1 (PDK1) pleckstrin homology (PH) domain	Back alignment and domain information

>PF15406 PH_6: Pleckstrin homology domain	Back alignment and domain information

>cd01232 PH_TRIO Trio pleckstrin homology (PH) domain	Back alignment and domain information

>cd01221 PH_ephexin Ephexin Pleckstrin homology (PH) domain	Back alignment and domain information

>KOG0930 consensus Guanine nucleotide exchange factor Cytohesin, contains PH and Sec7 domains [Intracellular trafficking, secretion, and vesicular transport]	Back alignment and domain information

>cd01224 PH_Collybistin Collybistin pleckstrin homology (PH) domain	Back alignment and domain information

>KOG0521 consensus Putative GTPase activating proteins (GAPs) [Signal transduction mechanisms]	Back alignment and domain information

>cd01248 PH_PLC Phospholipase C (PLC) pleckstrin homology (PH) domain	Back alignment and domain information

>KOG1090 consensus Predicted dual-specificity phosphatase [General function prediction only]	Back alignment and domain information

>cd01227 PH_Dbs Dbs (DBL's big sister) pleckstrin homology (PH) domain	Back alignment and domain information

>cd01226 PH_exo84 Exocyst complex 84-kDa subunit Pleckstrin Homology (PH) domain	Back alignment and domain information

>PF12814 Mcp5_PH: Meiotic cell cortex C-terminal pleckstrin homology; InterPro: IPR024774 This pleckstrin homology domain is found in eukaryotic proteins, including Mcp5, a fungal protein that anchors dynein at the cell cortex during the horsetail phase (prophase I) of meiosis	Back alignment and domain information

>cd01228 PH_BCR-related BCR (breakpoint cluster region)-related pleckstrin homology (PH) domain	Back alignment and domain information

>PTZ00267 NIMA-related protein kinase; Provisional	Back alignment and domain information

>cd01223 PH_Vav Vav pleckstrin homology (PH) domain	Back alignment and domain information

>KOG0705 consensus GTPase-activating protein Centaurin gamma (contains Ras-like GTPase, PH and ankyrin repeat domains) [Signal transduction mechanisms]	Back alignment and domain information

>KOG4424 consensus Predicted Rho/Rac guanine nucleotide exchange factor/faciogenital dysplasia protein 3 [Signal transduction mechanisms]	Back alignment and domain information

>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]	Back alignment and domain information

>cd01242 PH_ROK Rok (Rho- associated kinase) pleckstrin homology (PH) domain	Back alignment and domain information

>PF15410 PH_9: Pleckstrin homology domain; PDB: 1WJM_A 1BTN_A 1MPH_A	Back alignment and domain information

>cd01256 PH_dynamin Dynamin pleckstrin homology (PH) domain	Back alignment and domain information

>cd01243 PH_MRCK MRCK (myotonic dystrophy-related Cdc42-binding kinase) pleckstrin homology (PH) domain	Back alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Alignment Graph	Length	Definition	E-value
Query		666
3spw_A		436	Structure Of Osh4pKES1P IN COMPLEX WITH PHOSPHATIDY		9e-05
1zht_A		438	Structure Of Yeast Oxysterol Binding Protein Osh4 I		1e-04
1zi7_A		406	Structure Of Truncated Yeast Oxysterol Binding Prot		2e-04

>pdb|3SPW|A Chain A, Structure Of Osh4pKES1P IN COMPLEX WITH PHOSPHATIDYLINOSITOL 4- Phosphate Length = 436

Back alignment and structure

Iteration: 1

Score = 45.8 bits (107), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 72/307 (23%), Positives = 121/307 (39%), Gaps = 47/307 (15%) Query: 342 LLRILNVAAFAVSGYAS-------SEGRHCKPFNPLLGETY-----EADYPEKG-VRFFS 388 L R+L V + +S S S G KP NP LGE + ++PE G S Sbjct: 81 LARMLAVTKWFISTLKSQYCSRNESLGSEKKPLNPFLGELFVGKWENKEHPEFGETVLLS 140 Query: 389 EKVSHHPTVIACHC--EGKGWKFWGDSNLRTKFWGRSIQL--DPVGVLTVEFDDGEVFQW 444 E+VSHHP V A + K G + ++ F +S+ L G ++ D E + Sbjct: 141 EQVSHHPPVTAFSIFNDKNKVKLQGYNQIKASF-TKSLMLTVKQFGHTMLDIKD-ESYLV 198 Query: 445 SKVTTSIYNLILGKIYCDHHGTMEIHGNCQYSCKLKFKEQSILD--RNPHQVNGFVEDVL 502 + I +++ + + G I + C ++F + +N + + + Sbjct: 199 TPPPLHIEGILVASPFVELEGKSYIQSSTGLLCVIEFSGRGYFSGKKNSFKARIYKDSKD 258 Query: 503 GKKVATLFGKWDNSMYYISGD--GSGKLKDGNVSPDASLLWKSNKAPLNLTRYNLTSFAI 560 K + ++Y ISG GS K+ N ++ L + + + P A Sbjct: 259 SKDK-------EKALYTISGQWSGSSKIIKANKKEESRLFYDAARIP-----------AE 300 Query: 561 TLNELTPGLQEKLPPTDSRLRPD-QRHLENGEYEKANAEKQRLERRQRMSRKLQEN---G 616 LN L+E+ P + D ++ G++ K LE QR RK +E Sbjct: 301 HLN--VKPLEEQHPLESRKAWYDVAGAIKLGDFNLIAKTKTELEETQRELRKEEEAKGIS 358 Query: 617 WKPRWFR 623 W+ RWF+ Sbjct: 359 WQRRWFK 365

PyMOL of 3spw

>pdb|1ZHT|A Chain A, Structure Of Yeast Oxysterol Binding Protein Osh4 In Complex With 7-Hydroxycholesterol Length = 438

Back alignment and structure

>pdb|1ZI7|A Chain A, Structure Of Truncated Yeast Oxysterol Binding Protein Osh4 Length = 406

Back alignment and structure

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Alignment Graph	Length	Definition	E-value
Query		666
1zhx_A		438	KES1 protein; oxysterol,sterol binding protein, li	1e-112
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	4e-08
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	4e-04
3rcp_A		103	Pleckstrin homology domain-containing family A ME;	2e-05
2rsg_A		94	Collagen type IV alpha-3-binding protein; pleckstr	2e-05
2d9x_A		120	Oxysterol binding protein-related protein 11; PH d	8e-04

>1zhx_A KES1 protein; oxysterol,sterol binding protein, lipid binding protein; HET: HC3; 1.50A {Saccharomyces cerevisiae} SCOP: d.338.1.1 PDB: 1zht_A* 1zhw_A* 1zhy_A* 1zhz_A* 3spw_A* 1zi7_A Length = 438	Back alignment and structure

 Score =  343 bits (881), Expect = e-112
 Identities = 72/435 (16%), Positives = 132/435 (30%), Gaps = 69/435 (15%)

Query: 278 DPVEKERGVSLWSMIK--DNVGKDLTRVCLPVYFNEPISSLQKCFEDLEYSYLLDRA--- 332
           DP +     S  S +K   +   DL+ +  P +   PIS  +      E+  L       
Sbjct: 4   DPSQYASSSSWTSFLKSIASFNGDLSSLSAPPFILSPISLTEFSQYWAEHPELFLEPSFI 63

Query: 333 ----------YEYGKAGNSLLRILNVAAFAVSGYAS-------SEGRHCKPFNPLLGETY 375
                      +       L R+L V  + +S   S       S G   KP NP LGE +
Sbjct: 64  NDDNYKEHCLIDPEVESPELARMLAVTKWFISTLKSQYCSRNESLGSEKKPLNPFLGELF 123

Query: 376 EADYPEK------GVRFFSEKVSHHPTVIACH--CEGKGWKFWGDSNLRTKFWGR-SIQL 426
              +  K           SE+VSHHP V A     +    K  G + ++  F     + +
Sbjct: 124 VGKWENKEHPEFGETVLLSEQVSHHPPVTAFSIFNDKNKVKLQGYNQIKASFTKSLMLTV 183

Query: 427 DPVGVLTVEFDDGEVFQWSKVTTSIYNLILGKIYCDHHGTMEIHGNCQYSCKLKFKEQSI 486
              G   ++    E +  +     I  +++   + +  G   I  +    C ++F  +  
Sbjct: 184 KQFGHTMLDIK-DESYLVTPPPLHIEGILVASPFVELEGKSYIQSSTGLLCVIEFSGRGY 242

Query: 487 LDRNPHQVNGFVEDVLG------KKVATLFGKWDNSMYYISGDGSGKLKDGNVSPDASLL 540
                +     +           K + T+ G+W  S   I  +   + +           
Sbjct: 243 FSGKKNSFKARIYKDSKDSKDKEKALYTISGQWSGSSKIIKANKKEESR----------- 291

Query: 541 WKSNKAPLNLTRYNLTSFAITLNELTPGLQEKLPPTDSRLRPDQRHLENGEYEKANAEKQ 600
                       Y+          + P  ++    +          ++ G++      K 
Sbjct: 292 ----------LFYDAARIPAEHLNVKPLEEQHPLESRKAWYDVAGAIKLGDFNLIAKTKT 341

Query: 601 RLERRQRMSRK-LQENG--WKPRWFRREGENGS-------FRYVGGYWEAREQLKWDECP 650
            LE  QR  RK  +  G  W+ RWF+    + +             + +    L      
Sbjct: 342 ELEETQRELRKEEEAKGISWQRRWFKDFDYSVTPEEGALVPEKDDTFLKLASALNLSTKN 401

Query: 651 NIFGEFCEDVHSSED 665
              G    D    ++
Sbjct: 402 APSGTLVGDKEDRKE 416

PyMOL of 1zhx

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

>3rcp_A Pleckstrin homology domain-containing family A ME; FAPP1, PH domain, lipid-binding, membrane, membrane protein; 1.90A {Homo sapiens} PDB: 2kcj_A Length = 103	Back alignment and structure

>2rsg_A Collagen type IV alpha-3-binding protein; pleckstrin homology, lipid transport; NMR {Homo sapiens} Length = 94	Back alignment and structure

>2d9x_A Oxysterol binding protein-related protein 11; PH domain, OSBP-related protein 11, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 120	Back alignment and structure

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Alignment Graph	Length	Definition	Probability
Query		666
1zhx_A		438	KES1 protein; oxysterol,sterol binding protein, li	100.0
2rsg_A		94	Collagen type IV alpha-3-binding protein; pleckstr	99.27
3rcp_A		103	Pleckstrin homology domain-containing family A ME;	99.26
2d9x_A		120	Oxysterol binding protein-related protein 11; PH d	99.2
2dhk_A		119	TBC1 domain family member 2; PH domain, paris-1, s	99.03
2da0_A		114	130-kDa phosphatidylinositol 4,5-biphosphate- depe	99.01
1v5u_A		117	SBF1, SET binding factor 1; MTMR5, the pleckstrin	98.93
2cod_A		115	Centaurin-delta 1; ARF GAP and RHO GAP with ankyri	98.91
1x05_A		129	Pleckstrin; PH domain, structural genomics, NPPSFA	98.9
2i5f_A		109	Pleckstrin; PH domain, protein-inositol phosphate	98.89
1x1g_A		129	Pleckstrin 2; PH domain, structural genomics, rike	98.88
4a6h_A		120	Phosphatidylinositol 4,5-bisphosphate-binding Pro	98.88
1btk_A		169	Bruton'S tyrosine kinase; transferase, PH domain,	98.87
1u5d_A		108	SKAP55, SRC kinase-associated phosphoprotein of 55	98.84
1v88_A		130	Oxysterol binding protein-related protein 8; vesic	98.84
1fao_A		126	Dual adaptor of phosphotyrosine and 3- phosphoinos	98.83
2lul_A		164	Tyrosine-protein kinase TEC; structural genomics,	98.82
1eaz_A		125	Tandem PH domain containing protein-1; lipid-bindi	98.81
1v89_A		118	Hypothetical protein KIAA0053; pleckstrin homology	98.8
1wgq_A		109	FYVE, rhogef and PH domain containing 6; ethanol d	98.8
1pls_A		113	Pleckstrin homology domain; phosphorylation; NMR {	98.79
2p0d_A		129	RHO GTPase-activating protein 9; protein-phosphoin	98.79
1fgy_A		127	GRP1; PH domain, signaling protein; HET: 4IP; 1.50	98.79
2dn6_A		115	KIAA0640 protein; PH domain, structural genomics,	98.78
2d9y_A		117	Pleckstrin homology domain-containing protein fami	98.78
2d9v_A		130	Pleckstrin homology domain-containing protein fami	98.76
1u5f_A		148	SRC-associated adaptor protein; PH domain of SKAP-	98.74
2rlo_A		128	Centaurin-gamma 1; split PH domain, alternative sp	98.72
1upq_A		123	PEPP1; PH domain, phosphoinositide binding, signal	98.71
2cof_A		107	Protein KIAA1914; PH domain, structural genomics,	98.71
3aj4_A		112	Pleckstrin homology domain-containing family B ME;	98.7
1v5p_A		126	Pleckstrin homology domain-containing, family A; T	98.68
2yry_A		122	Pleckstrin homology domain-containing family A mem	98.68
2dkp_A		128	Pleckstrin homology domain-containing family A mem	98.68
1wg7_A		150	Dedicator of cytokinesis protein 9; pleckstrin hom	98.67
1btn_A		106	Beta-spectrin; signal transduction protein; HET: I	98.63
1x1f_A		149	Signal-transducing adaptor protein 1; docking prot	98.62
1unq_A		125	RAC-alpha serine/threonine kinase; transferase, pl	98.58
1u5e_A		211	SRC-associated adaptor protein; novel dimerization	98.56
3tfm_A		228	Myosin X; split PH domain, motor protein; 2.53A {R	98.56
2j59_M		168	RHO-GTPase activating protein 10; ARF, ARF1, ARFBD	98.54
2w2x_D		124	1-phosphatidylinositol-4,5-bisphosphate phosphodie	98.51
1qqg_A		264	IRS-1, insulin receptor substrate 1; beta-sandwhic	98.5
2y7b_A		134	Actin-binding protein anillin; cell cycle; 1.90A {	98.49
3a8p_A		263	T-lymphoma invasion and metastasis-inducing protei	98.43
3lju_X		386	ARF-GAP with dual PH domain-containing protein 1;	98.39
1wjm_A		123	Beta-spectrin III; PH domain, signal transduction,	98.39
1wi1_A		126	Calcium-dependent activator protein for secretion,	98.37
2q13_A		385	DCC-interacting protein 13 alpha; APPL1, BAR domai	98.35
2coc_A		112	FYVE, rhogef and PH domain containing protein 3; s	98.33
3cxb_B		112	Pleckstrin homology domain-containing family M mem	98.31
2ys3_A		137	UNC-112-related protein 2; PH domain, kindlin-3, s	98.28
2r09_A		347	Cytohesin-3; autoinhibition, GRP1, PIP3, ARF, 3-ph	98.25
4h8s_A		407	DCC-interacting protein 13-beta; BAR domain, pleck	98.23
1dro_A		122	Beta-spectrin; cytoskeleton; NMR {Drosophila melan	98.17
3pp2_A		124	RHO GTPase-activating protein 27; PH domain, GTPas	98.06
4bbk_A		165	Kindlin-1, fermitin family homolog 1; PH domain, c	98.06
4f7h_A		173	Fermitin family homolog 2; beta-barrel, membrane b	98.05
3lju_X		386	ARF-GAP with dual PH domain-containing protein 1;	98.03
2rov_A		117	RHO-associated protein kinase 2; ATP-binding, coil	98.02
2dtc_A		126	RAL guanine nucleotide exchange factor ralgps1A; P	97.87
1dyn_A		125	Dynamin; signal transduction protein; 2.20A {Homo	97.71
1w1g_A		151	HPDK1, 3-phosphoinositide dependent protein kinase	97.7
3tca_A		291	Amyloid beta A4 precursor protein-binding family 1	97.53
3a8n_A		279	TIAM-1, T-lymphoma invasion and metastasis-inducin	96.94
2lg1_A		185	A-kinase anchor protein 13; metal binding protein;	96.93
1mai_A		131	Phospholipase C delta-1; pleckstrin, inositol tris	96.88
4ejn_A		446	RAC-alpha serine/threonine-protein kinase; AKT1, a	96.8
2d9w_A		127	Docking protein 2; PH domain, structural genomics,	96.63
2fjl_A		150	1-phosphatidylinositol-4,5-bisphosphate phosphodie	96.25
3qwm_A		140	Iqsec1, IQ motif and SEC7 domain-containing protei	96.1
1nty_A		311	Triple functional domain protein; DBL, pleckstrin,	95.91
3t06_A		418	PDZ-rhogef, RHO guanine nucleotide exchange factor	95.89
1xcg_A		368	PDZ-rhogef, RHO guanine nucleotide exchange factor	95.89
1v61_A		132	RAC/CDC42 guanine nucleotide exchange factor (GEF)	95.8
1txd_A		385	RHO guanine nucleotide exchange factor 12; helical	95.73
3p6a_A		377	RHO guanine nucleotide exchange factor 1; regulati	95.58
1zc3_B		113	Exocyst complex protein EXO84; exocytosis, small G	95.28
2rgn_B		354	RHOA/RAC/CDC42 exchange factor; heterotrimeric G-p	95.27
3mpx_A		434	FYVE, rhogef and PH domain-containing protein 5; s	95.25
3odw_A		536	RHO guanine nucleotide exchange factor 1; regulati	95.15
1dbh_A		354	Protein (human SOS 1); guanine nucleotide exchange	94.92
2vrw_B		406	P95VAV, VAV1, proto-oncogene VAV; lipoprotein, GTP	94.71
3hk0_A		256	Growth factor receptor-bound protein 10; GRB10, RA	94.47
1kz7_A		353	Guanine nucleotide exchange factor DBS; guanine nu	94.23
3tfm_A		228	Myosin X; split PH domain, motor protein; 2.53A {R	94.09
2pz1_A		466	RHO guanine nucleotide exchange factor 4; helical	93.95
2dfk_A		402	Collybistin II; DH domain, PH domain, cell cycle;	93.46
3ky9_A		587	Proto-oncogene VAV; calponin homology domain, DBL	92.62
4gmv_A		281	RAS-associated and pleckstrin homology domains-CO	92.54
3jzy_A		510	Intersectin 2; C2 domain, structural genomics cons	92.16
2z0q_A		346	XPLN, RHO guanine nucleotide exchange factor 3; DH	91.96
1foe_A		377	T-lymphoma invasion and metastasis inducing protei	88.95
3ksy_A		1049	SOS-1, SON of sevenless homolog 1; RAS, RAS activa	82.74
1fho_A		119	UNC-89; pleckstrin homology domain, electrostatics	80.94

>1zhx_A KES1 protein; oxysterol,sterol binding protein, lipid binding protein; HET: HC3; 1.50A {Saccharomyces cerevisiae} SCOP: d.338.1.1 PDB: 1zht_A* 1zhw_A* 1zhy_A* 1zhz_A* 3spw_A* 1zi7_A	Back alignment and structure

Probab=100.00  E-value=1.3e-85  Score=721.05  Aligned_cols=320  Identities=22%  Similarity=0.358  Sum_probs=282.9

Q ss_pred             ccchhHHHhhhccC---CCCccccccccccccCChhhhhhhcccchHhHHHHhhcC-------CCCC------HHHHHHH
Q 042453          284 RGVSLWSMIKDNVG---KDLTRVCLPVYFNEPISSLQKCFEDLEYSYLLDRAYEYG-------KAGN------SLLRILN  347 (666)
Q Consensus       284 ~~vslwsilK~~iG---kDLtkIslPv~~~EP~S~LQr~~e~~ey~~lLd~Aa~~~-------~~~d------p~eRm~~  347 (666)
                      .+.++|+++.++||   +|||+|+|||+||||+|+||+++++|+|++||+.|+...       +..|      |++||++
T Consensus         9 ~~~s~w~~~lK~i~k~g~DLSkIslPv~i~EP~SlLE~~~~~~e~~dLL~~aa~~~~~~~~a~~~~D~~~~~~p~eRm~~   88 (438)
T 1zhx_A            9 ASSSSWTSFLKSIASFNGDLSSLSAPPFILSPISLTEFSQYWAEHPELFLEPSFINDDNYKEHCLIDPEVESPELARMLA   88 (438)
T ss_dssp             TTSHHHHHHHHTTTTCCSCGGGSCCCGGGEEEEEGGGGGGGGCSCHHHHHGGGGCCTTTGGGSCTTCTTCSCHHHHHHHH
T ss_pred             ccccHHHHHHHHhhhcCCChhhcccCchhcCCccHHHHHHHhhhhHHHHhhhhhcccccccccccCCccccCCHHHHHHH
Confidence            56899986666665   599999999999999999999999999999999998631       1238      9999999


Q ss_pred             HHHHHHhhhcccC-------CCCCCCCCCCCCCeEEEEecC-----CC-eEEEeeecccCCceeeEEEeCC--cEEEEEE
Q 042453          348 VAAFAVSGYASSE-------GRHCKPFNPLLGETYEADYPE-----KG-VRFFSEKVSHHPTVIACHCEGK--GWKFWGD  412 (666)
Q Consensus       348 V~aF~vS~y~~~~-------~r~kKPfNPILGETFe~~~~d-----~g-~rfiaEQVSHHPPIsAf~~e~~--g~~~~G~  412 (666)
                      |++|+||+|++..       ++.+|||||||||||+|.|++     .| ++|||||||||||||||||+++  ||+++|+
T Consensus        89 V~af~lS~~~~~y~~~~~~~~~~kKPfNPiLGETFe~~~~d~~~~~~g~~~~iaEQVSHHPPISA~~~e~~~~g~~~~g~  168 (438)
T 1zhx_A           89 VTKWFISTLKSQYCSRNESLGSEKKPLNPFLGELFVGKWENKEHPEFGETVLLSEQVSHHPPVTAFSIFNDKNKVKLQGY  168 (438)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHSSCCEEECCCTTCEEEEEECCTTCTTTCCEEEEEEEEEETTEEEEEEEEETTTTEEEEEE
T ss_pred             HHHHHHhhhhhhcccccccccccccCcCCcccceEEEEecCccCCCCCcEEEEEEeccCCCCeeEEEEEcCCCCEEEEEE
Confidence            9999999987532       688999999999999999986     45 8999999999999999999974  8999999


Q ss_pred             eeeeEEEEEe-EEEEEEeeEEEEEecCCcEEEEeeeeeeeeeeeeceeeEeecceEEEEcCCcceEEEeeeecccccCCC
Q 042453          413 SNLRTKFWGR-SIQLDPVGVLTVEFDDGEVFQWSKVTTSIYNLILGKIYCDHHGTMEIHGNCQYSCKLKFKEQSILDRNP  491 (666)
Q Consensus       413 ~~~kskF~G~-Si~v~~~G~~~l~f~~gE~Y~~~~p~~~i~nli~G~~~ie~~G~~~I~~~tg~~a~i~Fk~k~~~g~~~  491 (666)
                      +.+++||||+ ||+|.+.|.++|+|. ||+|+|++|+++|+|||+|++|+|++|+|.|+|.+|++|+|+|+++|||||+.
T Consensus       169 ~~~kskF~G~~Sv~v~~~G~~~l~l~-~E~Y~~t~P~~~v~gIi~G~~~vE~~G~~~I~~~tg~~~~l~F~~kg~f~g~~  247 (438)
T 1zhx_A          169 NQIKASFTKSLMLTVKQFGHTMLDIK-DESYLVTPPPLHIEGILVASPFVELEGKSYIQSSTGLLCVIEFSGRGYFSGKK  247 (438)
T ss_dssp             EEEEEEECTTCCEEEEEECCEEEEET-TEEEEEECCCEEEECTTTTCCEEEECSEEEEEETTSCEEEEEEECSSSSCSSS
T ss_pred             eeeEEEEcCceEEEEEcceEEEEEEC-CcEEEEecCcEEEEEEEecceeEecCCeEEEEcCCCCEEEEEEcCCCCcCCCc
Confidence            9999999999 999999999999999 89999999999999999999999999999999999999999999999999999


Q ss_pred             ceEEEEEEcc------CCcEEEEEEeEECceEEEEeCCCCCcccCCCCCCCCeeEeecCCCCccccccccccceeecccC
Q 042453          492 HQVNGFVEDV------LGKKVATLFGKWDNSMYYISGDGSGKLKDGNVSPDASLLWKSNKAPLNLTRYNLTSFAITLNEL  565 (666)
Q Consensus       492 ~~V~G~I~d~------~gk~~~~i~G~Wd~~i~~~~~~~~~k~k~~~~~~~~~~lW~~~~~~~~~~~y~~t~fa~~LNel  565 (666)
                      |.|+|.|++.      +|+++++|.|+|++.|++......         ....++|+.++.+...       +     .+
T Consensus       248 n~v~G~I~~~~~~~~~~~~~l~~i~G~W~~~l~i~~~~~~---------~~~~~~~~~~~~~~~~-------~-----~v  306 (438)
T 1zhx_A          248 NSFKARIYKDSKDSKDKEKALYTISGQWSGSSKIIKANKK---------EESRLFYDAARIPAEH-------L-----NV  306 (438)
T ss_dssp             SEEEEEEESSTTGGGCGGGCSEEEEEETTSEEEEEETTCG---------GGCEEEEETTTSCCCC-------C-----BC
T ss_pred             cEEEEEEEcCCcccCCCCcEEEEEEEEEcceEEEEeCCCC---------ccceEEeccCCCCCcc-------c-----cC
Confidence            9999999984      678899999999999999765430         1257899998754321       1     12


Q ss_pred             CccccCCCCCCCCCC--hhhhhhhhcCChhHHHHHHHHHHHHHHHHHHhhc---CCCCcceeEecCC
Q 042453          566 TPGLQEKLPPTDSRL--RPDQRHLENGEYEKANAEKQRLERRQRMSRKLQE---NGWKPRWFRREGE  627 (666)
Q Consensus       566 ~p~l~~~l~PTDSR~--RpD~raLe~Gd~d~A~~eK~rLEekQR~~RK~re---~~w~Pr~F~~~~~  627 (666)
                      .|  .+.++|||||+  |||++||++||++.|+++|.+|||+||++||+|+   ..|+||||++..+
T Consensus       307 ~p--~e~q~ptdSR~~Wr~d~~ale~Gd~d~A~~eK~rLEe~QR~~rk~re~~g~~w~Pr~F~~~~~  371 (438)
T 1zhx_A          307 KP--LEEQHPLESRKAWYDVAGAIKLGDFNLIAKTKTELEETQRELRKEEEAKGISWQRRWFKDFDY  371 (438)
T ss_dssp             CC--GGGCCTTBHHHHTHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCCSSEEEEEC
T ss_pred             CC--hhhCCCcccchhhHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccceEEECCc
Confidence            33  24578999997  8999999999999999999999999999998775   5799999999754

PyMOL of 1zhx

>2rsg_A Collagen type IV alpha-3-binding protein; pleckstrin homology, lipid transport; NMR {Homo sapiens}	Back alignment and structure

>3rcp_A Pleckstrin homology domain-containing family A ME; FAPP1, PH domain, lipid-binding, membrane, membrane protein; 1.90A {Homo sapiens} PDB: 2kcj_A	Back alignment and structure

>2d9x_A Oxysterol binding protein-related protein 11; PH domain, OSBP-related protein 11, structural genomics, NPPSFA; NMR {Homo sapiens}	Back alignment and structure

>2dhk_A TBC1 domain family member 2; PH domain, paris-1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}	Back alignment and structure

>2da0_A 130-kDa phosphatidylinositol 4,5-biphosphate- dependent ARF1 GTPase-activating protein...; PH domain, structural genomics, NPPSFA; NMR {Homo sapiens}	Back alignment and structure

>1v5u_A SBF1, SET binding factor 1; MTMR5, the pleckstrin homology domain, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.55.1.1	Back alignment and structure

>2cod_A Centaurin-delta 1; ARF GAP and RHO GAP with ankyrin repeat and PH domains (ARAP) 2, PH domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1	Back alignment and structure

>1x05_A Pleckstrin; PH domain, structural genomics, NPPSFA, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.55.1.1 PDB: 1xx0_A	Back alignment and structure

>2i5f_A Pleckstrin; PH domain, protein-inositol phosphate complex, lipid binding protein; HET: 5IP; 1.35A {Homo sapiens} SCOP: b.55.1.1 PDB: 2i5c_A* 1zm0_A	Back alignment and structure

>1x1g_A Pleckstrin 2; PH domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1	Back alignment and structure

>4a6h_A Phosphatidylinositol 4,5-bisphosphate-binding Pro SLM1; signaling protein; HET: I4C; 1.45A {Saccharomyces cerevisiae} PDB: 3nsu_A* 4a6f_A* 4a6k_A* 4a6f_B* 4a5k_A	Back alignment and structure

>1btk_A Bruton'S tyrosine kinase; transferase, PH domain, BTK motif, zinc binding, X-linked agammaglobulinemia, tyrosine-protein kinase; 1.60A {Homo sapiens} SCOP: b.55.1.1 PDB: 1b55_A* 2z0p_A* 1bwn_A*	Back alignment and structure

>1u5d_A SKAP55, SRC kinase-associated phosphoprotein of 55 kDa; PH domain, signaling protein; 1.70A {Homo sapiens} SCOP: b.55.1.1	Back alignment and structure

>1v88_A Oxysterol binding protein-related protein 8; vesicle transport, pleckstrin homology domain, phosphatidylinositol binding, structural genomics; NMR {Homo sapiens} SCOP: b.55.1.1	Back alignment and structure

>1fao_A Dual adaptor of phosphotyrosine and 3- phosphoinositides; pleckstrin, inositol tetrakisphosphate signal transduction protein, adaptor protein; HET: 4IP; 1.80A {Homo sapiens} SCOP: b.55.1.1 PDB: 1fb8_A	Back alignment and structure

>2lul_A Tyrosine-protein kinase TEC; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, transferase; NMR {Homo sapiens}	Back alignment and structure

>1eaz_A Tandem PH domain containing protein-1; lipid-binding protein, lipid degradation, phosphatidylinositol (3, 4)-bisphosphate, signalling; HET: CIT; 1.40A {Homo sapiens} SCOP: b.55.1.1	Back alignment and structure

>1v89_A Hypothetical protein KIAA0053; pleckstrin homology domain, phosphatidylinositol binding, structural genomics; NMR {Homo sapiens} SCOP: b.55.1.1	Back alignment and structure

>1wgq_A FYVE, rhogef and PH domain containing 6; ethanol decreased 4; pleckstrin homoloy domain, signal transduction, structural genomics; NMR {Mus musculus} SCOP: b.55.1.1	Back alignment and structure

>1pls_A Pleckstrin homology domain; phosphorylation; NMR {Homo sapiens} SCOP: b.55.1.1	Back alignment and structure

>2p0d_A RHO GTPase-activating protein 9; protein-phosphoinositide complex, pleckstrin homology domain, ligand binding protein; HET: I3P; 1.81A {Homo sapiens} PDB: 2p0f_A 2p0h_A*	Back alignment and structure

>1fgy_A GRP1; PH domain, signaling protein; HET: 4IP; 1.50A {Mus musculus} SCOP: b.55.1.1 PDB: 1fgz_A 1u2b_A 1fhw_A* 1fhx_A* 1u29_A* 1u27_A*	Back alignment and structure

>2dn6_A KIAA0640 protein; PH domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}	Back alignment and structure

>2d9y_A Pleckstrin homology domain-containing protein family A member 6; PH domain, PEPP-3, structural genomics, NPPSFA; NMR {Homo sapiens}	Back alignment and structure

>2d9v_A Pleckstrin homology domain-containing protein family B member 1; PH domain, phret1, structural genomics, NPPSFA; NMR {Mus musculus}	Back alignment and structure

>1u5f_A SRC-associated adaptor protein; PH domain of SKAP-HOM, artefactual dimerization induced by V derived sequence, signaling protein; 1.90A {Mus musculus} SCOP: b.55.1.1 PDB: 1u5g_A	Back alignment and structure

>2rlo_A Centaurin-gamma 1; split PH domain, alternative splicing, ANK repeat, cytoplasm, GTP-binding, GTPase activation, metal-binding, nucleotide-binding; NMR {Homo sapiens}	Back alignment and structure

>1upq_A PEPP1; PH domain, phosphoinositide binding, signal transduction; 1.48A {Homo sapiens} SCOP: b.55.1.1 PDB: 1upr_A*	Back alignment and structure

>2cof_A Protein KIAA1914; PH domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1	Back alignment and structure

>3aj4_A Pleckstrin homology domain-containing family B ME; antiparallel beta sheet, protein transport; HET: SEP EDO; 1.00A {Homo sapiens} PDB: 3via_A 2dhi_A	Back alignment and structure

>1v5p_A Pleckstrin homology domain-containing, family A; TAPP2, the pleckstrin homology domain, structural genomics; NMR {Mus musculus} SCOP: b.55.1.1	Back alignment and structure

>2yry_A Pleckstrin homology domain-containing family A member 6; PH domain, PEPP-3, structural genomics, NPPSFA; NMR {Homo sapiens}	Back alignment and structure

>2dkp_A Pleckstrin homology domain-containing family A member 5; PH domain, pleckstrin homology domain-containing protein family A member 5; NMR {Homo sapiens}	Back alignment and structure

>1wg7_A Dedicator of cytokinesis protein 9; pleckstrin homology domain, zizimin1, structural genomics, riken structural genomics/proteomics initiative; NMR {Homo sapiens} SCOP: b.55.1.1	Back alignment and structure

>1btn_A Beta-spectrin; signal transduction protein; HET: I3P; 2.00A {Mus musculus} SCOP: b.55.1.1 PDB: 1mph_A	Back alignment and structure

>1x1f_A Signal-transducing adaptor protein 1; docking protein BRDG1, PH domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1	Back alignment and structure

>1unq_A RAC-alpha serine/threonine kinase; transferase, pleckstrin homology domain, PKB, AKT, phosphoinositide, serine/threonine-protein kinase; HET: 4IP; 0.98A {Homo sapiens} SCOP: b.55.1.1 PDB: 1h10_A* 1unr_A 2uzs_A* 2uzr_A 2uvm_A* 1unp_A 2x18_A* 1p6s_A	Back alignment and structure

>1u5e_A SRC-associated adaptor protein; novel dimerization domain, PH domain, signaling protein; 2.60A {Mus musculus} SCOP: b.55.1.1 PDB: 2otx_A	Back alignment and structure

>3tfm_A Myosin X; split PH domain, motor protein; 2.53A {Rattus norvegicus}	Back alignment and structure

>2j59_M RHO-GTPase activating protein 10; ARF, ARF1, ARFBD, arhgap21, myristate, transport, nucleotide-binding, rhogap protein, hydrolase; HET: GTP; 2.1A {Homo sapiens} SCOP: b.55.1.1 PDB: 2dhj_A	Back alignment and structure

>2w2x_D 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase gamma-2; hydrolase, phospholipase C, phosphoinositides, RHO gtpases, RAC, SH2 domain; HET: GSP; 2.30A {Homo sapiens} PDB: 2w2w_A* 2w2x_C* 2k2j_A	Back alignment and structure

>1qqg_A IRS-1, insulin receptor substrate 1; beta-sandwhich, signal transduction; 2.30A {Homo sapiens} SCOP: b.55.1.2 b.55.1.2 PDB: 1irs_A*	Back alignment and structure

>2y7b_A Actin-binding protein anillin; cell cycle; 1.90A {Homo sapiens}	Back alignment and structure

>3a8p_A T-lymphoma invasion and metastasis-inducing protein 2; guanine nucleotide exchange factor, alternative splicing, cell projection, coiled coil; 2.10A {Mus musculus} PDB: 3a8q_A	Back alignment and structure

>3lju_X ARF-GAP with dual PH domain-containing protein 1; structural genomics consortium, GTPase activation, SGC, binding, nucleus, phosphoprotein; HET: IP9; 1.70A {Homo sapiens} PDB: 3feh_A* 3fm8_C 3mdb_C*	Back alignment and structure

>1wjm_A Beta-spectrin III; PH domain, signal transduction, structural genomics, spectrin beta chain, brain 2, KIAA0302; NMR {Homo sapiens} SCOP: b.55.1.1	Back alignment and structure

>1wi1_A Calcium-dependent activator protein for secretion, CAPS; PH domain, PIP2 binding site, structural genomics; NMR {Homo sapiens} SCOP: b.55.1.1	Back alignment and structure

>2q13_A DCC-interacting protein 13 alpha; APPL1, BAR domain, PH domain, BAR-PH domain, protein transpo; 2.05A {Homo sapiens} PDB: 2z0o_A 2elb_A	Back alignment and structure

>2coc_A FYVE, rhogef and PH domain containing protein 3; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.55.1.1	Back alignment and structure

>3cxb_B Pleckstrin homology domain-containing family M member 2; SIFA, SKIP, complex, virulence, cytoplasm, membrane, polymorphism, signaling protein; 2.60A {Homo sapiens} PDB: 3hw2_B	Back alignment and structure

>2ys3_A UNC-112-related protein 2; PH domain, kindlin-3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}	Back alignment and structure

>2r09_A Cytohesin-3; autoinhibition, GRP1, PIP3, ARF, 3-phosphoinositide, pleckst homology domain, guanine-nucleotide releasing factor, signa protein; HET: 4IP PGE PE5; 1.90A {Mus musculus} SCOP: a.118.3.1 b.55.1.1 PDB: 2r0d_A*	Back alignment and structure

>4h8s_A DCC-interacting protein 13-beta; BAR domain, pleckstrin homology domain, adaptor protein, RAB signaling protein; 3.50A {Homo sapiens}	Back alignment and structure

>1dro_A Beta-spectrin; cytoskeleton; NMR {Drosophila melanogaster} SCOP: b.55.1.1	Back alignment and structure

>3pp2_A RHO GTPase-activating protein 27; PH domain, GTPase activator, pleckstrin homology domain, STR genomics consortium, SGC, hydrolase activator; HET: CIT; 1.42A {Homo sapiens}	Back alignment and structure

>4bbk_A Kindlin-1, fermitin family homolog 1; PH domain, cell adhesion; 2.10A {Mus musculus}	Back alignment and structure

>4f7h_A Fermitin family homolog 2; beta-barrel, membrane binding, integrin activation, cytoplas membrane, cell adhesion; HET: SRT; 1.90A {Homo sapiens} PDB: 2lko_A*	Back alignment and structure

>3lju_X ARF-GAP with dual PH domain-containing protein 1; structural genomics consortium, GTPase activation, SGC, binding, nucleus, phosphoprotein; HET: IP9; 1.70A {Homo sapiens} PDB: 3feh_A* 3fm8_C 3mdb_C*	Back alignment and structure

>2rov_A RHO-associated protein kinase 2; ATP-binding, coiled coil, cytoplasm, membrane, metal-binding, nucleotide-binding, phorbol-ester binding; NMR {Rattus norvegicus}	Back alignment and structure

>2dtc_A RAL guanine nucleotide exchange factor ralgps1A; PH domain, protein binding, structural genomics, NPPSFA; 1.70A {Mus musculus}	Back alignment and structure

>1dyn_A Dynamin; signal transduction protein; 2.20A {Homo sapiens} SCOP: b.55.1.1 PDB: 2dyn_A 3zys_C 2ys1_A	Back alignment and structure

>1w1g_A HPDK1, 3-phosphoinositide dependent protein kinase-1; transferase, PKB, pleckstrin homology domain, inositol phosphate, signal transduction; HET: 4PT; 1.45A {Homo sapiens} SCOP: b.55.1.1 PDB: 1w1d_A* 1w1h_A 2vki_A	Back alignment and structure

>3tca_A Amyloid beta A4 precursor protein-binding family 1-interacting protein; RA domain, RBD, PH domain; 2.35A {Mus musculus}	Back alignment and structure

>3a8n_A TIAM-1, T-lymphoma invasion and metastasis-inducing protein 1; guanine nucleotide exchange factor, guanine-nucleotide releasing factor, lipoprotein; 4.50A {Mus musculus}	Back alignment and structure

>2lg1_A A-kinase anchor protein 13; metal binding protein; NMR {Homo sapiens}	Back alignment and structure

>1mai_A Phospholipase C delta-1; pleckstrin, inositol trisphosphate, signal transduction protein, hydrolase; HET: I3P; 1.90A {Rattus norvegicus} SCOP: b.55.1.1	Back alignment and structure

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*	Back alignment and structure

>2d9w_A Docking protein 2; PH domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}	Back alignment and structure

>2fjl_A 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase gamma 1; beta-barrel, hydrolase; NMR {Rattus norvegicus} SCOP: b.55.1.1	Back alignment and structure

>3qwm_A Iqsec1, IQ motif and SEC7 domain-containing protein 1; structural genomics, structural genomics consortium, SGC; 2.39A {Homo sapiens}	Back alignment and structure

>1nty_A Triple functional domain protein; DBL, pleckstrin, GEF, RHO, GTPase, guanine-nucleotide releas factor, phosphorylation, signaling protein; 1.70A {Homo sapiens} SCOP: a.87.1.1 b.55.1.1 PDB: 2nz8_B 2kr9_A	Back alignment and structure

>3t06_A PDZ-rhogef, RHO guanine nucleotide exchange factor 11; DH-PH RHOA complex, pdzrhogef, guanine nucleotide exchange F RHOA, signaling protein; 2.84A {Homo sapiens}	Back alignment and structure

>1xcg_A PDZ-rhogef, RHO guanine nucleotide exchange factor 11; X-RAY crystallography, regulation of RHOA GTPase, protein complex; 2.50A {Homo sapiens} SCOP: a.87.1.1 b.55.1.1 PDB: 3kz1_A*	Back alignment and structure

>1v61_A RAC/CDC42 guanine nucleotide exchange factor (GEF) 6; pleckstrin homology domain, structural genomics; NMR {Mus musculus} SCOP: b.55.1.1	Back alignment and structure

>1txd_A RHO guanine nucleotide exchange factor 12; helical bundle (DH), beta sandwich (PH), signaling protein; 2.13A {Homo sapiens} SCOP: a.87.1.1 b.55.1.1 PDB: 1x86_A	Back alignment and structure

>3p6a_A RHO guanine nucleotide exchange factor 1; regulation of RHOA GTPase, rhogef, DH, PH, signaling PR; 2.50A {Homo sapiens} PDB: 3odo_A	Back alignment and structure

>1zc3_B Exocyst complex protein EXO84; exocytosis, small GTPase, GTP-binding protein,, signaling protein; HET: GNP; 2.00A {Rattus norvegicus} SCOP: b.55.1.1 PDB: 1zc4_B*	Back alignment and structure

>2rgn_B RHOA/RAC/CDC42 exchange factor; heterotrimeric G-protein, small molecular weight G-protein, complex, protein-protein complex, rhogef, galphaq; HET: GDP; 3.50A {Homo sapiens}	Back alignment and structure

>3mpx_A FYVE, rhogef and PH domain-containing protein 5; structural genomics consortium, DH domain, SGC, L binding protein; 2.80A {Homo sapiens}	Back alignment and structure

>3odw_A RHO guanine nucleotide exchange factor 1; regulation of RHOA GTPase, rhogef, DH, PH, signaling PR; 3.20A {Homo sapiens} PDB: 3odx_A	Back alignment and structure

>1dbh_A Protein (human SOS 1); guanine nucleotide exchange factor, gene regulation; 2.30A {Homo sapiens} SCOP: a.87.1.1 b.55.1.1 PDB: 1pms_A 1awe_A	Back alignment and structure

>2vrw_B P95VAV, VAV1, proto-oncogene VAV; lipoprotein, GTP-binding, metal-binding, phosphoprotein, exchange factor, RAC, GTPase, membrane domain; 1.85A {Mus musculus} PDB: 3bji_A 1f5x_A	Back alignment and structure

>3hk0_A Growth factor receptor-bound protein 10; GRB10, RA, PH, RAS-associating, pleckstrin-homology, adapter phosphoprotein, SH2 domain; 2.60A {Homo sapiens}	Back alignment and structure

>1kz7_A Guanine nucleotide exchange factor DBS; guanine nucleotide exchange factor (GEF), small G-protein, signaling protein; 2.40A {Mus musculus} SCOP: a.87.1.1 b.55.1.1 PDB: 1lb1_A 1kzg_A 1rj2_A	Back alignment and structure

>3tfm_A Myosin X; split PH domain, motor protein; 2.53A {Rattus norvegicus}	Back alignment and structure

>2pz1_A RHO guanine nucleotide exchange factor 4; helical bundle, beta barrel, beta sandwich, signaling protei; 2.25A {Homo sapiens} PDB: 2dx1_A 3nmz_D 3nmx_D	Back alignment and structure

>2dfk_A Collybistin II; DH domain, PH domain, cell cycle; 2.15A {Rattus norvegicus} SCOP: a.87.1.1 b.55.1.1	Back alignment and structure

>3ky9_A Proto-oncogene VAV; calponin homology domain, DBL homology domain, pleckst homology domain, C1 domain, guanine-nucleotide releasing FA metal-binding; 2.73A {Homo sapiens} PDB: 2d86_A	Back alignment and structure

>4gmv_A RAS-associated and pleckstrin homology domains-CO protein 1; RA-PH, coiled-coil region, RAS-association domain, pleckstri homology domain; 2.40A {Homo sapiens} PDB: 4gn1_A	Back alignment and structure

>3jzy_A Intersectin 2; C2 domain, structural genomics consortium (SGC), endocytosis; 1.56A {Homo sapiens} PDB: 3qbv_B* 1ki1_B	Back alignment and structure

>2z0q_A XPLN, RHO guanine nucleotide exchange factor 3; DH-PH domain, alternative splicing, cytoplasm, guanine- nucleotide releasing factor; 1.79A {Mus musculus} PDB: 3eo2_A	Back alignment and structure

>1foe_A T-lymphoma invasion and metastasis inducing protein 1; DBL homology domain, pleckstrin homology domain, GTPase, guanine nucleotide exchange factor; 2.80A {Mus musculus} SCOP: a.87.1.1 b.55.1.1	Back alignment and structure

>3ksy_A SOS-1, SON of sevenless homolog 1; RAS, RAS activator, disease mutation, guanine-nucleotide releasing factor, signaling protein; 3.18A {Homo sapiens} PDB: 1xd4_A 1xdv_A 1q9c_A	Back alignment and structure

>1fho_A UNC-89; pleckstrin homology domain, electrostatics, muscle, signal transduction, signaling protein; NMR {Caenorhabditis elegans} SCOP: b.55.1.1	Back alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Alignment Graph	Length	Definition	E-value
Query		666
d1zhxa1		433	d.338.1.1 (A:2-434) Oxysterol-binding protein homo	3e-92
d1btka_		169	b.55.1.1 (A:) Bruton's tyrosine kinase {Human (Hom	0.003

>d1zhxa1 d.338.1.1 (A:2-434) Oxysterol-binding protein homolog 4, KES1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 433	Back information, alignment and structure


class: Alpha and beta proteins (a+b)
fold: Oxysterol-binding protein-like
superfamily: Oxysterol-binding protein-like
family: Oxysterol-binding protein
domain: Oxysterol-binding protein homolog 4, KES1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score =  290 bits (744), Expect = 3e-92
 Identities = 78/443 (17%), Positives = 134/443 (30%), Gaps = 93/443 (20%)

Query: 286 VSLWSMIKDN---VGKDLTRVCLPVYFNEPISSLQKCFEDLEYSYLLDRA---------- 332
            S W+    +      DL+ +  P +   PIS  +      E+  L              
Sbjct: 6   SSSWTSFLKSIASFNGDLSSLSAPPFILSPISLTEFSQYWAEHPELFLEPSFINDDNYKE 65

Query: 333 ---YEYGKAGNSLLRILNVAAFAVSGYAS-------SEGRHCKPFNPLLGETYEADYPEK 382
               +       L R+L V  + +S   S       S G   KP NP LGE +   +  K
Sbjct: 66  HCLIDPEVESPELARMLAVTKWFISTLKSQYCSRNESLGSEKKPLNPFLGELFVGKWENK 125

Query: 383 ------GVRFFSEKVSHHPTVIACHCEG--KGWKFWGDSNLRTKFWG-RSIQLDPVGVLT 433
                      SE+VSHHP V A          K  G + ++  F     + +   G   
Sbjct: 126 EHPEFGETVLLSEQVSHHPPVTAFSIFNDKNKVKLQGYNQIKASFTKSLMLTVKQFGHTM 185

Query: 434 VEFDDGEVFQWSKVTTSIYNLILGKIYCDHHGTMEIHGNCQYSCKLKFKEQSILDRNPHQ 493
           ++  D E +  +     I  +++   + +  G   I  +    C ++F  +       + 
Sbjct: 186 LDIKD-ESYLVTPPPLHIEGILVASPFVELEGKSYIQSSTGLLCVIEFSGRGYFSGKKNS 244

Query: 494 VNGFVEDVLGKKVATLFGKWDNSMYYISGDGSGKLKDGNVSPDASLLWKSNKAPLNLTRY 553
               +               + ++Y ISG  SG  K          + K+NK   +   Y
Sbjct: 245 FKARIYKDSKDSK-----DKEKALYTISGQWSGSSK----------IIKANKKEESRLFY 289

Query: 554 NLTSFAITLNELTPGLQEKLPPTDSRLRPDQRHLENGEYEKANAEKQRLERRQRMSRKLQ 613
           +          + P  ++    +          ++ G++      K  LE  QR  RK +
Sbjct: 290 DAARIPAEHLNVKPLEEQHPLESRKAWYDVAGAIKLGDFNLIAKTKTELEETQRELRKEE 349

Query: 614 EN---GWKPRWFRRE-----GENGSFR--------------------------------- 632
           E     W+ RWF+        E G+                                   
Sbjct: 350 EAKGISWQRRWFKDFDYSVTPEEGALVPEKDDTFLKLASALNLSTKNAPSGTLVGDKEDR 409

Query: 633 ---YVGGYWEAREQLKWDECPNI 652
                  +W  + +  WDE   I
Sbjct: 410 KEDLSSIHWRFQRE-LWDEEKEI 431

PyMOL of d1zhxa1

>d1btka_ b.55.1.1 (A:) Bruton's tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 169	Back information, alignment and structure

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Alignment Graph	Length	Definition	Probability
Query		666
d1zhxa1		433	Oxysterol-binding protein homolog 4, KES1 {Baker's	100.0
d1faoa_		100	Dual adaptor of phosphotyrosine and 3-phosphoinosi	98.99
d2coca1		99	FYVE, RhoGEF and PH domain containing protein 3, F	98.79
d2cofa1		95	KIAA1914 {Human (Homo sapiens) [TaxId: 9606]}	98.78
d1btka_		169	Bruton's tyrosine kinase {Human (Homo sapiens) [Ta	98.76
d2coda1		102	Centaurin-delta 1 {Human (Homo sapiens) [TaxId: 96	98.7
d1eaza_		103	Tapp1 {Human (Homo sapiens) [TaxId: 9606]}	98.69
d2elba2		101	DCC-interacting protein 13-alpha, APPL1 {Human (Ho	98.65
d1v5ua_		117	SET binding factor 1, Sbf1 {Mouse (Mus musculus) [	98.64
d1qqga1		103	Insulin receptor substrate 1, IRS-1 {Human (Homo s	98.63
d1v5pa_		126	Tapp2 {Mouse (Mus musculus) [TaxId: 10090]}	98.63
d2j59m1		133	Rho GTPase-activating protein 21 {Human (Homo sapi	98.62
d1x1fa1		136	Signal-transducing adaptor protein 1, STAP-1 {Huma	98.62
d1wi1a_		126	Calcium-dependent activator protein for secretion,	98.61
d1wg7a_		150	Dedicator of cytokinesis protein 9, DOCK9 {Human (	98.6
d1w1ha_		147	3-phosphoinositide dependent protein kinase-1 {Hum	98.6
d1fgya_		127	Grp1 {Mouse (Mus musculus) [TaxId: 10090]}	98.6
d2fjla1		101	Phosphoinositide phospholipase C, PLC-gamma-1 {Rat	98.57
d1u5fa1		111	Src-associated adaptor protein Skap2 {Mouse (Mus m	98.56
d1v88a_		130	Oxysterol binding protein-related protein 8 (ORP-8	98.5
d1v89a_		118	Rho-GTPase-activating protein 25 (KIAA0053) {Human	98.49
d2coaa1		112	Protein kinase c, d2 type {Human (Homo sapiens) [T	98.48
d1omwa2		119	G-protein coupled receptor kinase 2 (beta-adrenerg	98.45
d2i5fa1		104	Pleckstrin {Human (Homo sapiens) [TaxId: 9606]}	98.42
d1u5da1		106	Src kinase-associated phosphoprotein SKAP55 (SCAP1	98.42
d1upqa_		107	Phosphoinositol 3-phosphate binding protein-1, PEP	98.42
d1wgqa_		109	FYVE, RhoGEF and PH domain containing protein 6, F	98.41
d1plsa_		113	Pleckstrin {Human (Homo sapiens) [TaxId: 9606]}	98.38
d2dyna_		111	Dynamin {Human (Homo sapiens) [TaxId: 9606]}	98.34
d1u5ea1		209	Src-associated adaptor protein Skap2 {Mouse (Mus m	98.31
d1btna_		106	beta-spectrin {Mouse (Mus musculus), brain [TaxId:	98.28
d1wjma_		123	beta-spectrin {Human (Homo sapiens), brain 2 isofo	98.24
d1x1ga1		116	Pleckstrin-2 {Human (Homo sapiens) [TaxId: 9606]}	98.16
d1v5ma_		136	SH2 and PH domain-containing adapter protein APS {	98.16
d1unqa_		118	Rac-alpha serine/threonine kinase {Human (Homo sap	97.91
d1v61a_		132	Rac/CDC42 GEF 6, alpha-pix {Mouse (Mus musculus) [	97.77
d1maia_		119	Phospholipase C delta-1 {Rat (Rattus norvegicus) [	97.74
d1droa_		122	beta-spectrin {Fruit fly (Drosophila melanogaster)	97.74
d1xcga2		140	Rho guanine nucleotide exchange factor 11, PDZ-Rho	97.05
d1zc3b1		109	Exocyst complex protein EXO84 {Rat (Rattus norvegi	97.01
d1fhoa_		119	UNC-89 {Nematode (Caenorhabditis elegans) [TaxId:	96.97
d1ntya2		121	Triple functional domain protein TRIO {Human (Homo	96.91
d2dfka2		162	Rho guanine nucleotide exchange factor 9, Collybis	96.81
d1ki1b2		142	GEF of intersectin {Human (Homo sapiens) [TaxId: 9	96.55
d1kz7a2		147	Dbl's big sister, Dbs {Mouse (Mus musculus) [TaxId	96.3
d1txda2		114	Rho guanine nucleotide exchange factor 12 {Human (	96.26
d1dbha2		133	Son of sevenless-1 (sos-1) {Human (Homo sapiens) [	95.76
d2zkmx3		131	Phospholipase C-beta-2 {Human (Homo sapiens) [TaxI	91.89

>d1zhxa1 d.338.1.1 (A:2-434) Oxysterol-binding protein homolog 4, KES1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}	Back information, alignment and structure

class: Alpha and beta proteins (a+b)
fold: Oxysterol-binding protein-like
superfamily: Oxysterol-binding protein-like
family: Oxysterol-binding protein
domain: Oxysterol-binding protein homolog 4, KES1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=2.2e-80  Score=678.45  Aligned_cols=322  Identities=22%  Similarity=0.326  Sum_probs=270.8

Q ss_pred             ccchhH-HHhhh--ccCCCCccccccccccccCChhhhhhhcccchHhHHHHhhcCC-------------CCCHHHHHHH
Q 042453          284 RGVSLW-SMIKD--NVGKDLTRVCLPVYFNEPISSLQKCFEDLEYSYLLDRAYEYGK-------------AGNSLLRILN  347 (666)
Q Consensus       284 ~~vslw-silK~--~iGkDLtkIslPv~~~EP~S~LQr~~e~~ey~~lLd~Aa~~~~-------------~~dp~eRm~~  347 (666)
                      .+.|.| +++|.  .+|+|||+|+|||+||||+|+||+++++|+|++||+.|+.+..             ..||++||++
T Consensus         4 ~~~s~w~~flk~i~s~~~DLs~is~P~~i~eP~S~Le~~a~~~ey~~Ll~~aa~~~d~~~~~~~~~~~~~e~~p~eRm~~   83 (433)
T d1zhxa1           4 ASSSSWTSFLKSIASFNGDLSSLSAPPFILSPISLTEFSQYWAEHPELFLEPSFINDDNYKEHCLIDPEVESPELARMLA   83 (433)
T ss_dssp             TTSHHHHHHHHTTTTCCSCGGGSCCCGGGEEEEEGGGGGGGGCSCHHHHHGGGGCCTTTGGGSCTTCTTCSCHHHHHHHH
T ss_pred             ccccHHHHHHHHHhhcCCccceeeeCceecccccHHHHHHHHHhhHHHHHHHhhcccccccccccccccccCCHHHHHHH
Confidence            457899 55554  3588999999999999999999999999999999999987432             4569999999


Q ss_pred             HHHHHHhhhcc-------cCCCCCCCCCCCCCCeEEEEecCC------CeEEEeeecccCCceeeEEEeCC--cEEEEEE
Q 042453          348 VAAFAVSGYAS-------SEGRHCKPFNPLLGETYEADYPEK------GVRFFSEKVSHHPTVIACHCEGK--GWKFWGD  412 (666)
Q Consensus       348 V~aF~vS~y~~-------~~~r~kKPfNPILGETFe~~~~d~------g~rfiaEQVSHHPPIsAf~~e~~--g~~~~G~  412 (666)
                      |++|+||+|++       +.++.||||||||||||+|.|+|.      +++|||||||||||||||||+++  ||.++|+
T Consensus        84 V~~f~lS~~~~~~~~~~~~~~~~kKPfNPiLGETfe~~~~d~~~~~~~~~~~iaEQVSHHPPIsA~~~~~~~~~~~~~g~  163 (433)
T d1zhxa1          84 VTKWFISTLKSQYCSRNESLGSEKKPLNPFLGELFVGKWENKEHPEFGETVLLSEQVSHHPPVTAFSIFNDKNKVKLQGY  163 (433)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHSSCCEEECCCTTCEEEEEECCTTCTTTCCEEEEEEEEEETTEEEEEEEEETTTTEEEEEE
T ss_pred             HHHHHHHHhhhhhcccccccccccCCCCCcccceEEEEEecCCCCcCCcEEEEEeCCCCCCcceeEEEEcCCCCEEEEEE
Confidence            99999999975       347899999999999999999874      58999999999999999999874  8999999


Q ss_pred             eeeeEEEEEeEEEEEEeeEEEEEec-CCcEEEEeeeeeeeeeeeeceeeEeecceEEEEcCCcceEEEeeeecccccCCC
Q 042453          413 SNLRTKFWGRSIQLDPVGVLTVEFD-DGEVFQWSKVTTSIYNLILGKIYCDHHGTMEIHGNCQYSCKLKFKEQSILDRNP  491 (666)
Q Consensus       413 ~~~kskF~G~Si~v~~~G~~~l~f~-~gE~Y~~~~p~~~i~nli~G~~~ie~~G~~~I~~~tg~~a~i~Fk~k~~~g~~~  491 (666)
                      ..++++|+| ++.|.+.|..++.|. .||+|.|++|+++|+|||+|++|+|++|+|.|+|.+|+.|+|.|+++|||+++.
T Consensus       164 ~~~~~~f~~-s~~i~~~g~~~~~l~~~~E~Y~~~~P~~~i~gii~G~~~vE~~G~~~I~~~tg~~a~i~f~~kg~fsg~~  242 (433)
T d1zhxa1         164 NQIKASFTK-SLMLTVKQFGHTMLDIKDESYLVTPPPLHIEGILVASPFVELEGKSYIQSSTGLLCVIEFSGRGYFSGKK  242 (433)
T ss_dssp             EEEEEEECT-TCCEEEEEECCEEEEETTEEEEEECCCEEEECTTTTCCEEEECSEEEEEETTSCEEEEEEECSSSSCSSS
T ss_pred             eeeeeeecc-eEEEEEcceEEEEEEecCcEEEEecCCEEEEEEEcCCceEEecceEEEEeCCCCEEEEEEcCCCccCCCc
Confidence            999999965 555555555444443 589999999999999999999999999999999999999999999999999999


Q ss_pred             ceEEEEEEccCC------cEEEEEEeEECceEEEEeCCCCCcccCCCCCCCCeeEeecCCCCccccccccccceeecccC
Q 042453          492 HQVNGFVEDVLG------KKVATLFGKWDNSMYYISGDGSGKLKDGNVSPDASLLWKSNKAPLNLTRYNLTSFAITLNEL  565 (666)
Q Consensus       492 ~~V~G~I~d~~g------k~~~~i~G~Wd~~i~~~~~~~~~k~k~~~~~~~~~~lW~~~~~~~~~~~y~~t~fa~~LNel  565 (666)
                      |.|+|.|++.+|      +.+++|.|+|++.+.++.....         ++..++|+.++.            ++.++++
T Consensus       243 ~~v~g~I~~~~~~~~~~~~~l~~i~G~W~~~~~~~~~~~~---------~~~~~~~d~~~~------------~~~~~~~  301 (433)
T d1zhxa1         243 NSFKARIYKDSKDSKDKEKALYTISGQWSGSSKIIKANKK---------EESRLFYDAARI------------PAEHLNV  301 (433)
T ss_dssp             SEEEEEEESSTTGGGCGGGCSEEEEEETTSEEEEEETTCG---------GGCEEEEETTTS------------CCCCCBC
T ss_pred             ceEEEEEEeCCCCCccccceeEEEecccCceEEEEeCCCC---------CcceEEEeCCcC------------CcccccC
Confidence            999999998665      4689999999999999765431         245667777653            3444555


Q ss_pred             CccccCCCCCCCCCChhhhhhhhcCChhHHHHHHHHHHHHHHHHHHhhc---CCCCcceeEecCC
Q 042453          566 TPGLQEKLPPTDSRLRPDQRHLENGEYEKANAEKQRLERRQRMSRKLQE---NGWKPRWFRREGE  627 (666)
Q Consensus       566 ~p~l~~~l~PTDSR~RpD~raLe~Gd~d~A~~eK~rLEekQR~~RK~re---~~w~Pr~F~~~~~  627 (666)
                      .|.....++|+|+|+|||++||++||++.|+++|.+|||+||++||+|+   ..|+||||+++.+
T Consensus       302 ~p~e~~~p~eS~~~wr~d~~ale~Gd~d~A~~eK~~LEe~QR~~Rk~re~~g~~w~Pr~F~~~~~  366 (433)
T d1zhxa1         302 KPLEEQHPLESRKAWYDVAGAIKLGDFNLIAKTKTELEETQRELRKEEEAKGISWQRRWFKDFDY  366 (433)
T ss_dssp             CCGGGCCTTBHHHHTHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCCSSEEEEEC
T ss_pred             CCcccCCCCCCccccHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCcCCCcEeccCC
Confidence            5532222334555579999999999999999999999999999998775   5799999999764

PyMOL of d1zhxa1

>d1faoa_ b.55.1.1 (A:) Dual adaptor of phosphotyrosine and 3-phosphoinositides DAPP1/PHISH {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

>d2coca1 b.55.1.1 (A:8-106) FYVE, RhoGEF and PH domain containing protein 3, FGD3 {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

>d2cofa1 b.55.1.1 (A:8-102) KIAA1914 {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

>d1btka_ b.55.1.1 (A:) Bruton's tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

>d2coda1 b.55.1.1 (A:8-109) Centaurin-delta 1 {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

>d1eaza_ b.55.1.1 (A:) Tapp1 {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

>d2elba2 b.55.1.1 (A:274-374) DCC-interacting protein 13-alpha, APPL1 {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

>d1v5ua_ b.55.1.1 (A:) SET binding factor 1, Sbf1 {Mouse (Mus musculus) [TaxId: 10090]}	Back information, alignment and structure

>d1qqga1 b.55.1.2 (A:12-114) Insulin receptor substrate 1, IRS-1 {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

>d1v5pa_ b.55.1.1 (A:) Tapp2 {Mouse (Mus musculus) [TaxId: 10090]}	Back information, alignment and structure

>d2j59m1 b.55.1.1 (M:931-1063) Rho GTPase-activating protein 21 {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

>d1x1fa1 b.55.1.1 (A:8-143) Signal-transducing adaptor protein 1, STAP-1 {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

>d1wi1a_ b.55.1.1 (A:) Calcium-dependent activator protein for secretion, CAPS {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

>d1wg7a_ b.55.1.1 (A:) Dedicator of cytokinesis protein 9, DOCK9 {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

>d1w1ha_ b.55.1.1 (A:) 3-phosphoinositide dependent protein kinase-1 {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

>d1fgya_ b.55.1.1 (A:) Grp1 {Mouse (Mus musculus) [TaxId: 10090]}	Back information, alignment and structure

>d2fjla1 b.55.1.1 (A:1-37,A:87-150) Phosphoinositide phospholipase C, PLC-gamma-1 {Rat (Rattus norvegicus) [TaxId: 10116]}	Back information, alignment and structure

>d1u5fa1 b.55.1.1 (A:109-219) Src-associated adaptor protein Skap2 {Mouse (Mus musculus) [TaxId: 10090]}	Back information, alignment and structure

>d1v88a_ b.55.1.1 (A:) Oxysterol binding protein-related protein 8 (ORP-8, KIAA1451) {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

>d1v89a_ b.55.1.1 (A:) Rho-GTPase-activating protein 25 (KIAA0053) {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

>d2coaa1 b.55.1.1 (A:8-119) Protein kinase c, d2 type {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

>d1omwa2 b.55.1.1 (A:550-668) G-protein coupled receptor kinase 2 (beta-adrenergic receptor kinase 1) {Cow (Bos taurus) [TaxId: 9913]}	Back information, alignment and structure

>d2i5fa1 b.55.1.1 (A:244-347) Pleckstrin {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

>d1u5da1 b.55.1.1 (A:108-213) Src kinase-associated phosphoprotein SKAP55 (SCAP1) {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

>d1upqa_ b.55.1.1 (A:) Phosphoinositol 3-phosphate binding protein-1, PEPP1 {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

>d1wgqa_ b.55.1.1 (A:) FYVE, RhoGEF and PH domain containing protein 6, Fgd6 (KIAA1362) {Mouse (Mus musculus) [TaxId: 10090]}	Back information, alignment and structure

>d1plsa_ b.55.1.1 (A:) Pleckstrin {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

>d2dyna_ b.55.1.1 (A:) Dynamin {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

>d1u5ea1 b.55.1.1 (A:14-222) Src-associated adaptor protein Skap2 {Mouse (Mus musculus) [TaxId: 10090]}	Back information, alignment and structure

>d1btna_ b.55.1.1 (A:) beta-spectrin {Mouse (Mus musculus), brain [TaxId: 10090]}	Back information, alignment and structure

>d1wjma_ b.55.1.1 (A:) beta-spectrin {Human (Homo sapiens), brain 2 isoform [TaxId: 9606]}	Back information, alignment and structure

>d1x1ga1 b.55.1.1 (A:8-123) Pleckstrin-2 {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

>d1v5ma_ b.55.1.1 (A:) SH2 and PH domain-containing adapter protein APS {Mouse (Mus musculus) [TaxId: 10090]}	Back information, alignment and structure

>d1unqa_ b.55.1.1 (A:) Rac-alpha serine/threonine kinase {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

>d1v61a_ b.55.1.1 (A:) Rac/CDC42 GEF 6, alpha-pix {Mouse (Mus musculus) [TaxId: 10090]}	Back information, alignment and structure

>d1maia_ b.55.1.1 (A:) Phospholipase C delta-1 {Rat (Rattus norvegicus) [TaxId: 10116]}	Back information, alignment and structure

>d1droa_ b.55.1.1 (A:) beta-spectrin {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}	Back information, alignment and structure

>d1xcga2 b.55.1.1 (A:942-1081) Rho guanine nucleotide exchange factor 11, PDZ-RhoGEF {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

>d1zc3b1 b.55.1.1 (B:171-279) Exocyst complex protein EXO84 {Rat (Rattus norvegicus) [TaxId: 10116]}	Back information, alignment and structure

>d1fhoa_ b.55.1.1 (A:) UNC-89 {Nematode (Caenorhabditis elegans) [TaxId: 6239]}	Back information, alignment and structure

>d1ntya2 b.55.1.1 (A:1415-1535) Triple functional domain protein TRIO {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

>d2dfka2 b.55.1.1 (A:240-401) Rho guanine nucleotide exchange factor 9, Collybistin {Rat (Rattus norvegicus) [TaxId: 10116]}	Back information, alignment and structure

>d1ki1b2 b.55.1.1 (B:1439-1580) GEF of intersectin {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

>d1kz7a2 b.55.1.1 (A:819-965) Dbl's big sister, Dbs {Mouse (Mus musculus) [TaxId: 10090]}	Back information, alignment and structure

>d1txda2 b.55.1.1 (A:1020-1133) Rho guanine nucleotide exchange factor 12 {Human (Homo sapiens), gamma isoform [TaxId: 9606]}	Back information, alignment and structure

>d1dbha2 b.55.1.1 (A:418-550) Son of sevenless-1 (sos-1) {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

>d2zkmx3 b.55.1.1 (X:11-141) Phospholipase C-beta-2 {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure