Citrus Sinensis ID: 042468

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340------
MAMILLENKLVLAAILVLGVWAPQSWSRTLNDATMNERHEMWMAQYGRVYRDNAEKEMRFKIFKENVEYIASFNNKARNKPYKLGINEFADQTNEEFRAPRNGYKRRLPSVRSSETTDVSFRYENASVPASIDWRKKGAVTGVKDQGQCGCCWAFSAVAAMEGINHITTRKLTSLSEQELVDCDTSGEDQGCEGGLMDDAFEFIISNKGLATEAKYPYKASDGSCNKKEANPSAAKISGYEDVPSNNEAALMKAVANQPVSVAIDASGSDFQFYSSGVFTGQCGTELDHGVTAVGYGTADDGTKYWLVKNSWGTTWGENGYIRMQRDIDAKEGLCGIAMQASYPTA
cHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHccccccEEEcccccccccHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHcccccccccHHccccccccccccccccHHHHHHHHHHccccccccccccccccccccccccccccEEEccEEEcccccHHHHHHHHHccccEEEEEcccccccccccccccccccccccEEEEEEEccccccccEEEEEEcccccccccccEEEEEccccccccccccccccccccc
cHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHcccccEEEEEcccccccHHHHHHHHccccccccccccccccccccccccccccccEEHHHHcccccccEccccEcHHHHHHHHHHHHHHHHHHcccccEcHHHHHHHccEccEcccEcccHHHHHHHHHHHccEcEccccccccccccccHHHHHcccEcccEEEEcccccHHHHHHHHHHccEEEEEccccHHHHHccccEEcccccccccEEEEEEEEEEEcccccEEEEEccEcccccEccEEEEEccccccccHHHcccccEEEEc
MAMILLENKLVLAAILVLGvwapqswsrtlndATMNERHEMWMAQYGRVYRDNAEKEMRFKIFKENVEYIASFNnkarnkpyklgINEFADqtneefraprngykrrlpsvrssettdvsfryenasvpasidwrkkgavtgvkdqgqcgccwAFSAVAAMEGINHIttrkltslseqelvdcdtsgedqgcegglmDDAFEFIISnkglateakypykasdgscnkkeanpsaakisgyedvpsnnEAALMKAVANQpvsvaidasgsdfqfyssgvftgqcgteldhgvtavgygtaddgtkYWLVKNswgttwgengyirmQRDIDAKEGLCgiamqasypta
MAMILLENKLVLAAILVLGVWAPQSWSRTLNDATMNERHEMWMAQYGRVYRDNAEKEMRFKIFKENVEYIASFnnkarnkpyKLGINEFADqtneefraprngykrrlpsvrssettdvsfryenasvpasidwRKKGAVTGVKDQGQCGCCWAFSAVAAMEGINHITTRKLTSLSEQELVDCDTSGEDQGCEGGLMDDAFEFIISNKGLATEAKYPYKASDGSCNKKEANPSAAKISGYEDVPSNNEAALMKAVANQPVSVAIDASGSDFQFYSSGVFTGQCGTELDHGVTAVGygtaddgtkYWLVKNSwgttwgengyIRMQRDIDAKEGLCGIAmqasypta
MAMILLENKLVLAAILVLGVWAPQSWSRTLNDATMNERHEMWMAQYGRVYRDNAEKEMRFKIFKENVEYIASFNNKARNKPYKLGINEFADQTNEEFRAPRNGYKRRLPSVRSSETTDVSFRYENASVPASIDWRKKGAVTGVKDQGQCGCCWAFSAVAAMEGINHITTRKLTSLSEQELVDCDTSGEDQGCEGGLMDDAFEFIISNKGLATEAKYPYKASDGSCNKKEANPSAAKISGYEDVPSNNEAALMKAVANQPVSVAIDASGSDFQFYSSGVFTGQCGTELDHGVTAVGYGTADDGTKYWLVKNSWGTTWGENGYIRMQRDIDAKEGLCGIAMQASYPTA
**MILLENKLVLAAILVLGVWAPQSWSRTLNDATMNERHEMWMAQYGRVYRDNAEKEMRFKIFKENVEYIASFNNKARNKPYKLGINEF*******************************FRYENASVPASIDWRKKGAVTGVKDQGQCGCCWAFSAVAAMEGINHITTRKLTSLSEQELVDCDT****QGCEGGLMDDAFEFIISNKGLATEAKY**************************************VANQPVSVAIDASGSDFQFYSSGVFTGQCGTELDHGVTAVGYGTADDGTKYWLVKNSWGTTWGENGYIRMQRDIDAKEGLCGIAM*******
*A****ENKLVLAAILVLGVWAPQSWSRTLNDATMNERHEMWMAQYGRVYRDNAEKEMRFKIFKENVEYIASFNNKARNKPYKLGINEFADQTNEEFRAPRNG*********************NASVPASIDWRKKGAVTGVKDQGQCGCCWAFSAVAAMEGINHITTRKLTSLSEQELVDCDTSGEDQGCEGGLMDDAFEFIISNKGLATEAKYPYKASDGSCNKKEANPSAAKISGYEDVPSNNEAALMKAVANQPVSVAIDASGSDFQFYSSGVFTGQCGTELDHGVTAVGYGTADDGTKYWLVKNSWGTTWGENGYIRMQRDIDAKEGLCGIAMQASYPTA
MAMILLENKLVLAAILVLGVWAPQSWSRTLNDATMNERHEMWMAQYGRVYRDNAEKEMRFKIFKENVEYIASFNNKARNKPYKLGINEFADQTNEEFRAPRNGYKRR*********TDVSFRYENASVPASIDWRKKGAVTGVKDQGQCGCCWAFSAVAAMEGINHITTRKLTSLSEQELVDCDTSGEDQGCEGGLMDDAFEFIISNKGLATEAKYPYKASDGSCNKKEANPSAAKISGYEDVPSNNEAALMKAVANQPVSVAIDASGSDFQFYSSGVFTGQCGTELDHGVTAVGYGTADDGTKYWLVKNSWGTTWGENGYIRMQRDIDAKEGLCGIAMQASYPTA
MAMILLENKLVLAAILVLGVWAPQSWSRTLNDATMNERHEMWMAQYGRVYRDNAEKEMRFKIFKENVEYIASFNNKARNKPYKLGINEFADQTNEEFRAPRNGYK**************SFRYENASVPASIDWRKKGAVTGVKDQGQCGCCWAFSAVAAMEGINHITTRKLTSLSEQELVDCDTSGEDQGCEGGLMDDAFEFIISNKGLATEAKYPYKASDGSCNKKEANPSAAKISGYEDVPSNNEAALMKAVANQPVSVAIDASGSDFQFYSSGVFTGQCGTELDHGVTAVGYGTADDGTKYWLVKNSWGTTWGENGYIRMQRDIDAKEGLCGIAMQASYPTA
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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SSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MAMILLENKLVLAAILVLGVWAPQSWSRTLNDATMNERHEMWMAQYGRVYRDNAEKEMRFKIFKENVEYIASFNNKARNKPYKLGINEFADQTNEEFRAPRNGYKRRLPSVRSSETTDVSFRYENASVPASIDWRKKGAVTGVKDQGQCGCCWAFSAVAAMEGINHITTRKLTSLSEQELVDCDTSGEDQGCEGGLMDDAFEFIISNKGLATEAKYPYKASDGSCNKKEANPSAAKISGYEDVPSNNEAALMKAVANQPVSVAIDASGSDFQFYSSGVFTGQCGTELDHGVTAVGYGTADDGTKYWLVKNSWGTTWGENGYIRMQRDIDAKEGLCGIAMQASYPTA
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query346 2.2.26 [Sep-21-2011]
O65039360 Vignain OS=Ricinus commun N/A no 0.872 0.838 0.616 1e-104
P25803362 Vignain OS=Phaseolus vulg N/A no 0.947 0.906 0.561 1e-104
P12412362 Vignain OS=Vigna mungo PE N/A no 0.872 0.834 0.603 1e-104
Q9FGR9361 KDEL-tailed cysteine endo no no 0.878 0.842 0.612 1e-103
P43156360 Thiol protease SEN102 OS= N/A no 0.956 0.919 0.573 1e-103
P25250373 Cysteine proteinase EP-B N/A no 0.878 0.815 0.559 2e-96
P25249371 Cysteine proteinase EP-B N/A no 0.878 0.819 0.562 3e-96
Q9STL4361 KDEL-tailed cysteine endo no no 0.867 0.831 0.556 5e-94
O65493355 Xylem cysteine proteinase no no 0.893 0.870 0.537 3e-93
Q9STL5364 KDEL-tailed cysteine endo no no 0.875 0.832 0.554 2e-92
>sp|O65039|CYSEP_RICCO Vignain OS=Ricinus communis GN=CYSEP PE=1 SV=1 Back     alignment and function desciption
 Score =  380 bits (975), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 190/308 (61%), Positives = 222/308 (72%), Gaps = 6/308 (1%)

Query: 39  HEMWMAQYGRVYRDNAEKEMRFKIFKENVEYIASFNNKARNKPYKLGINEFADQTNEEFR 98
           +E W + +  V R   EK+ RF +FK N  ++ + N    +KPYKL +N+FAD TN EFR
Sbjct: 38  YERWRSHH-TVSRSLHEKQKRFNVFKHNAMHVHNANK--MDKPYKLKLNKFADMTNHEFR 94

Query: 99  APRNGYK-RRLPSVRSSETTDVSFRYENA-SVPASIDWRKKGAVTGVKDQGQCGCCWAFS 156
              +G K +     R     + +F YE   +VPAS+DWRKKGAVT VKDQGQCG CWAFS
Sbjct: 95  NTYSGSKVKHHRMFRGGPRGNGTFMYEKVDTVPASVDWRKKGAVTSVKDQGQCGSCWAFS 154

Query: 157 AVAAMEGINHITTRKLTSLSEQELVDCDTSGEDQGCEGGLMDDAFEFIISNKGLATEAKY 216
            + A+EGIN I T KL SLSEQELVDCDT  ++QGC GGLMD AFEFI    G+ TEA Y
Sbjct: 155 TIVAVEGINQIKTNKLVSLSEQELVDCDTD-QNQGCNGGLMDYAFEFIKQRGGITTEANY 213

Query: 217 PYKASDGSCNKKEANPSAAKISGYEDVPSNNEAALMKAVANQPVSVAIDASGSDFQFYSS 276
           PY+A DG+C+  + N  A  I G+E+VP N+E AL+KAVANQPVSVAIDA GSDFQFYS 
Sbjct: 214 PYEAYDGTCDVSKENAPAVSIDGHENVPENDENALLKAVANQPVSVAIDAGGSDFQFYSE 273

Query: 277 GVFTGQCGTELDHGVTAVGYGTADDGTKYWLVKNSWGTTWGENGYIRMQRDIDAKEGLCG 336
           GVFTG CGTELDHGV  VGYGT  DGTKYW VKNSWG  WGE GYIRM+R I  KEGLCG
Sbjct: 274 GVFTGSCGTELDHGVAIVGYGTTIDGTKYWTVKNSWGPEWGEKGYIRMERGISDKEGLCG 333

Query: 337 IAMQASYP 344
           IAM+ASYP
Sbjct: 334 IAMEASYP 341
Involved in programmed cell death.
Ricinus communis (taxid: 3988)
EC: 3EC: .EC: 4EC: .EC: 2EC: 2EC: .EC: -
>sp|P25803|CYSEP_PHAVU Vignain OS=Phaseolus vulgaris PE=2 SV=2 Back     alignment and function description
>sp|P12412|CYSEP_VIGMU Vignain OS=Vigna mungo PE=1 SV=1 Back     alignment and function description
>sp|Q9FGR9|CEP1_ARATH KDEL-tailed cysteine endopeptidase CEP1 OS=Arabidopsis thaliana GN=CEP1 PE=2 SV=1 Back     alignment and function description
>sp|P43156|CYSP_HEMSP Thiol protease SEN102 OS=Hemerocallis sp. GN=SEN102 PE=2 SV=1 Back     alignment and function description
>sp|P25250|CYSP2_HORVU Cysteine proteinase EP-B 2 OS=Hordeum vulgare GN=EPB2 PE=1 SV=1 Back     alignment and function description
>sp|P25249|CYSP1_HORVU Cysteine proteinase EP-B 1 OS=Hordeum vulgare GN=EPB1 PE=2 SV=1 Back     alignment and function description
>sp|Q9STL4|CEP2_ARATH KDEL-tailed cysteine endopeptidase CEP2 OS=Arabidopsis thaliana GN=CEP2 PE=2 SV=1 Back     alignment and function description
>sp|O65493|XCP1_ARATH Xylem cysteine proteinase 1 OS=Arabidopsis thaliana GN=XCP1 PE=1 SV=1 Back     alignment and function description
>sp|Q9STL5|CEP3_ARATH KDEL-tailed cysteine endopeptidase CEP3 OS=Arabidopsis thaliana GN=CEP3 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query346
255564908342 cysteine protease, putative [Ricinus com 0.971 0.982 0.744 1e-149
255564910341 cysteine protease, putative [Ricinus com 0.973 0.988 0.740 1e-147
255563110344 cysteine protease, putative [Ricinus com 0.985 0.991 0.732 1e-147
225443827340 PREDICTED: vignain-like [Vitis vinifera] 0.979 0.997 0.738 1e-140
225446583341 PREDICTED: KDEL-tailed cysteine endopept 0.982 0.997 0.694 1e-139
225446581341 PREDICTED: vignain [Vitis vinifera] 0.982 0.997 0.694 1e-139
224121800342 predicted protein [Populus trichocarpa] 0.976 0.988 0.690 1e-138
147788834341 hypothetical protein VITISV_005140 [Viti 0.982 0.997 0.691 1e-138
147839728341 hypothetical protein VITISV_032465 [Viti 0.982 0.997 0.691 1e-138
37780045343 cysteine protease 5 [Trifolium repens] 0.959 0.967 0.704 1e-138
>gi|255564908|ref|XP_002523447.1| cysteine protease, putative [Ricinus communis] gi|223537275|gb|EEF38906.1| cysteine protease, putative [Ricinus communis] Back     alignment and taxonomy information
 Score =  534 bits (1375), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 254/341 (74%), Positives = 290/341 (85%), Gaps = 5/341 (1%)

Query: 7   ENKLVLAAILVLGVWAPQSWSRTLNDATMNERHEMWMAQYGRVYRDNAEKEMRFKIFKEN 66
           ENKL+  A+LV+G+WA Q+WSR+L+DA MNERHEMWMA+YGRVY+DN+EKE RF+IF+ N
Sbjct: 6   ENKLMFVALLVVGLWASQAWSRSLHDAAMNERHEMWMAKYGRVYKDNSEKERRFEIFRNN 65

Query: 67  VEYIASFNNKARNKPYKLGINEFADQTNEEFRAPRNGYKRRLPSVRSSETTDVSFRYENA 126
           VE+I SFN K  N+PYKL INEFAD TNEEF+  +NGYKR   S     T   SFRY N 
Sbjct: 66  VEFIESFN-KLGNRPYKLDINEFADLTNEEFKVSKNGYKR---SSGVGLTEKSSFRYANV 121

Query: 127 S-VPASIDWRKKGAVTGVKDQGQCGCCWAFSAVAAMEGINHITTRKLTSLSEQELVDCDT 185
           + VP S+DWR+ GAVT +KDQGQCGCCWAFSAVAAMEGI  ++T KL SLSEQELVDCDT
Sbjct: 122 TAVPTSMDWRQNGAVTPIKDQGQCGCCWAFSAVAAMEGITKLSTGKLISLSEQELVDCDT 181

Query: 186 SGEDQGCEGGLMDDAFEFIISNKGLATEAKYPYKASDGSCNKKEANPSAAKISGYEDVPS 245
           SGEDQGCEGGLMDDAFEFI  N GL TEA YPY+ +DG+CN  +A   AAKI+GYEDVP+
Sbjct: 182 SGEDQGCEGGLMDDAFEFIKQNGGLTTEANYPYQGTDGTCNTNKAGNDAAKITGYEDVPA 241

Query: 246 NNEAALMKAVANQPVSVAIDASGSDFQFYSSGVFTGQCGTELDHGVTAVGYGTADDGTKY 305
           N+E AL+KAVA+QPVSVAIDASGS FQFYS GVFTG CGTELDHGVTAVGYGT+DDGTKY
Sbjct: 242 NSEDALLKAVASQPVSVAIDASGSAFQFYSGGVFTGDCGTELDHGVTAVGYGTSDDGTKY 301

Query: 306 WLVKNSWGTTWGENGYIRMQRDIDAKEGLCGIAMQASYPTA 346
           WLVKNSWGT+WGE+GYIRM+RDI+AKEGLCGIAMQ SYPTA
Sbjct: 302 WLVKNSWGTSWGEDGYIRMERDIEAKEGLCGIAMQPSYPTA 342

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|255564910|ref|XP_002523448.1| cysteine protease, putative [Ricinus communis] gi|223537276|gb|EEF38907.1| cysteine protease, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|255563110|ref|XP_002522559.1| cysteine protease, putative [Ricinus communis] gi|223538250|gb|EEF39859.1| cysteine protease, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|225443827|ref|XP_002274223.1| PREDICTED: vignain-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|225446583|ref|XP_002280204.1| PREDICTED: KDEL-tailed cysteine endopeptidase CEP1 [Vitis vinifera] Back     alignment and taxonomy information
>gi|225446581|ref|XP_002280246.1| PREDICTED: vignain [Vitis vinifera] Back     alignment and taxonomy information
>gi|224121800|ref|XP_002330656.1| predicted protein [Populus trichocarpa] gi|222872260|gb|EEF09391.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|147788834|emb|CAN64655.1| hypothetical protein VITISV_005140 [Vitis vinifera] Back     alignment and taxonomy information
>gi|147839728|emb|CAN70559.1| hypothetical protein VITISV_032465 [Vitis vinifera] Back     alignment and taxonomy information
>gi|37780045|gb|AAP32195.1| cysteine protease 5 [Trifolium repens] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query346
TAIR|locus:2152445346 SAG12 "senescence-associated g 0.913 0.913 0.586 1.6e-102
TAIR|locus:2157712361 CEP1 "cysteine endopeptidase 1 0.878 0.842 0.609 1.1e-96
TAIR|locus:2055440345 AT2G34080 [Arabidopsis thalian 0.959 0.962 0.531 3.8e-94
TAIR|locus:2167821 463 RD21B "esponsive to dehydratio 0.878 0.656 0.563 3e-92
TAIR|locus:2038588348 AT2G27420 [Arabidopsis thalian 0.907 0.902 0.545 5e-92
TAIR|locus:2029924355 AT1G29090 [Arabidopsis thalian 0.959 0.935 0.514 1.9e-90
TAIR|locus:2082881341 AT3G49340 [Arabidopsis thalian 0.895 0.909 0.520 2.5e-88
TAIR|locus:2122113355 XCP1 "xylem cysteine peptidase 0.893 0.870 0.537 5.3e-88
TAIR|locus:2090614 452 AT3G19390 [Arabidopsis thalian 0.945 0.723 0.508 1.8e-87
TAIR|locus:505006391364 CEP3 "cysteine endopeptidase 3 0.875 0.832 0.554 4.7e-87
TAIR|locus:2152445 SAG12 "senescence-associated gene 12" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1016 (362.7 bits), Expect = 1.6e-102, P = 1.6e-102
 Identities = 190/324 (58%), Positives = 240/324 (74%)

Query:    27 SRTL-NDATMNERHEMWMAQYGRVYRDNAEKEMRFKIFKENVEYIASFNNKARNKPYKLG 85
             SR L N+  M +RH  WM ++GRVY D  E+  R+ +FK NVE I   N+    + +KL 
Sbjct:    25 SRPLDNELIMQKRHIEWMTKHGRVYADVKEENNRYVVFKNNVERIEHLNSIPAGRTFKLA 84

Query:    86 INEFADQTNEEFRAPRNGYKRRLPSVRSSETTDVS-FRYENAS---VPASIDWRKKGAVT 141
             +N+FAD TN+EFR+   G+K  + ++ S   T +S FRY+N S   +P S+DWRKKGAVT
Sbjct:    85 VNQFADLTNDEFRSMYTGFKG-VSALSSQSQTKMSPFRYQNVSSGALPVSVDWRKKGAVT 143

Query:   142 GVKDQGQCGCCWAFSAVAAMEGINHITTRKLTSLSEQELVDCDTSGEDQGCEGGLMDDAF 201
              +K+QG CGCCWAFSAVAA+EG   I   KL SLSEQ+LVDCDT+  D GCEGGLMD AF
Sbjct:   144 PIKNQGSCGCCWAFSAVAAIEGATQIKKGKLISLSEQQLVDCDTN--DFGCEGGLMDTAF 201

Query:   202 EFIISNKGLATEAKYPYKASDGSCNKKEANPSAAKISGYEDVPSNNEAALMKAVANQPVS 261
             E I +  GL TE+ YPYK  D +CN K+ NP A  I+GYEDVP N+E ALMKAVA+QPVS
Sbjct:   202 EHIKATGGLTTESNYPYKGEDATCNSKKTNPKATSITGYEDVPVNDEQALMKAVAHQPVS 261

Query:   262 VAIDASGSDFQFYSSGVFTGQCGTELDHGVTAVGYGTADDGTKYWLVKNSWGTTWGENGY 321
             V I+  G DFQFYSSGVFTG+C T LDH VTA+GYG + +G+KYW++KNSWGT WGE+GY
Sbjct:   262 VGIEGGGFDFQFYSSGVFTGECTTYLDHAVTAIGYGESTNGSKYWIIKNSWGTKWGESGY 321

Query:   322 IRMQRDIDAKEGLCGIAMQASYPT 345
             +R+Q+D+  K+GLCG+AM+ASYPT
Sbjct:   322 MRIQKDVKDKQGLCGLAMKASYPT 345
GO:0005576 "extracellular region" evidence=ISM
GO:0006508 "proteolysis" evidence=IEA;ISS
GO:0008234 "cysteine-type peptidase activity" evidence=IEA;ISS
GO:0009723 "response to ethylene stimulus" evidence=IEP
GO:0007568 "aging" evidence=IEP;TAS
GO:0010150 "leaf senescence" evidence=IEP;TAS
GO:0010282 "senescence-associated vacuole" evidence=IDA
GO:0009817 "defense response to fungus, incompatible interaction" evidence=IEP
TAIR|locus:2157712 CEP1 "cysteine endopeptidase 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2055440 AT2G34080 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2167821 RD21B "esponsive to dehydration 21B" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2038588 AT2G27420 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2029924 AT1G29090 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2082881 AT3G49340 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2122113 XCP1 "xylem cysteine peptidase 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2090614 AT3G19390 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:505006391 CEP3 "cysteine endopeptidase 3" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
P07711CATL1_HUMAN3, ., 4, ., 2, 2, ., 1, 50.43670.93350.9699yesno
O65039CYSEP_RICCO3, ., 4, ., 2, 2, ., -0.61680.87280.8388N/Ano
Q95029CATL_DROME3, ., 4, ., 2, 2, ., 1, 50.46170.89300.8328yesno
P25249CYSP1_HORVU3, ., 4, ., 2, 2, ., -0.56270.87860.8194N/Ano
P06797CATL1_MOUSE3, ., 4, ., 2, 2, ., 1, 50.45510.87860.9101yesno
Q9GL24CATL1_CANFA3, ., 4, ., 2, 2, ., 1, 50.44890.87860.9129yesno
P43156CYSP_HEMSP3, ., 4, ., 2, 2, ., -0.57390.95660.9194N/Ano
P25803CYSEP_PHAVU3, ., 4, ., 2, 2, ., -0.56140.94790.9060N/Ano
P07154CATL1_RAT3, ., 4, ., 2, 2, ., 1, 50.45170.87280.9041yesno
P25250CYSP2_HORVU3, ., 4, ., 2, 2, ., -0.55940.87860.8150N/Ano
P25251CYSP4_BRANA3, ., 4, ., 2, 2, ., -0.54570.83230.8780N/Ano
P12412CYSEP_VIGMU3, ., 4, ., 2, 2, ., -0.60380.87280.8342N/Ano

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.4.220.921

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
GSVIVG00018722001
SubName- Full=Chromosome chr12 scaffold_18, whole genome shotgun sequence; (341 aa)
(Vitis vinifera)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query346
pfam00112213 pfam00112, Peptidase_C1, Papain family cysteine pr 1e-129
cd02248210 cd02248, Peptidase_C1A, Peptidase C1A subfamily (M 1e-113
smart00645175 smart00645, Pept_C1, Papain family cysteine protea 3e-90
PTZ00200448 PTZ00200, PTZ00200, cysteine proteinase; Provision 6e-71
PTZ00021489 PTZ00021, PTZ00021, falcipain-2; Provisional 2e-65
PTZ00203348 PTZ00203, PTZ00203, cathepsin L protease; Provisio 3e-64
cd02620236 cd02620, Peptidase_C1A_CathepsinB, Cathepsin B gro 2e-41
cd02619223 cd02619, Peptidase_C1, C1 Peptidase family (MEROPS 2e-38
cd02621243 cd02621, Peptidase_C1A_CathepsinC, Cathepsin C; al 7e-34
cd02698239 cd02698, Peptidase_C1A_CathepsinX, Cathepsin X; th 8e-34
smart0084857 smart00848, Inhibitor_I29, Cathepsin propeptide in 3e-20
pfam0824658 pfam08246, Inhibitor_I29, Cathepsin propeptide inh 5e-19
COG4870372 COG4870, COG4870, Cysteine protease [Posttranslati 2e-16
PTZ00364548 PTZ00364, PTZ00364, dipeptidyl-peptidase I precurs 5e-14
PTZ00049693 PTZ00049, PTZ00049, cathepsin C-like protein; Prov 5e-13
PTZ00462 1004 PTZ00462, PTZ00462, Serine-repeat antigen protein; 3e-09
>gnl|CDD|215726 pfam00112, Peptidase_C1, Papain family cysteine protease Back     alignment and domain information 
 Score =  368 bits (947), Expect = e-129
 Identities = 133/220 (60%), Positives = 156/220 (70%), Gaps = 9/220 (4%)

Query: 128 VPASIDWRKKGAVTGVKDQGQCGCCWAFSAVAAMEGINHITTRKLTSLSEQELVDCDTSG 187
           +P S DWR+KGAVT VKDQGQCG CWAFSAV A+EG   I T KL SLSEQ+LVDCDT  
Sbjct: 1   LPESFDWREKGAVTPVKDQGQCGSCWAFSAVGALEGRYCIKTGKLVSLSEQQLVDCDT-- 58

Query: 188 EDQGCEGGLMDDAFEFIISNKGLATEAKYPYKASDGSCNKKEANPSAAKISGYEDVPSNN 247
            + GC GGL D+AFE+I  N G+ TE+ YPY A DG+C  K++N   AKI GY DVP N+
Sbjct: 59  GNNGCNGGLPDNAFEYIKKNGGIVTESDYPYTAHDGTCKFKKSNSKYAKIKGYGDVPYND 118

Query: 248 EAALMKAVA-NQPVSVAIDASGSDFQFYSSGVFTG-QCGTELDHGVTAVGYGTADDGTKY 305
           E AL  A+A N PVSVAIDA   DFQ Y SGV+   +C  ELDH V  VGYGT ++G  Y
Sbjct: 119 EEALQAALAKNGPVSVAIDAYEDDFQLYKSGVYKHTECSGELDHAVLIVGYGT-ENGVPY 177

Query: 306 WLVKNSWGTTWGENGYIRMQRDIDAKEGLCGIAMQASYPT 345
           W+VKNSWGT WGENGY R+ R ++     CGIA +ASYP 
Sbjct: 178 WIVKNSWGTDWGENGYFRIARGVNE----CGIASEASYPI 213

Length = 213
>gnl|CDD|239068 cd02248, Peptidase_C1A, Peptidase C1A subfamily (MEROPS database nomenclature); composed of cysteine peptidases (CPs) similar to papain, including the mammalian CPs (cathepsins B, C, F, H, L, K, O, S, V, X and W) Back     alignment and domain information
>gnl|CDD|214761 smart00645, Pept_C1, Papain family cysteine protease Back     alignment and domain information
>gnl|CDD|240310 PTZ00200, PTZ00200, cysteine proteinase; Provisional Back     alignment and domain information
>gnl|CDD|240232 PTZ00021, PTZ00021, falcipain-2; Provisional Back     alignment and domain information
>gnl|CDD|185513 PTZ00203, PTZ00203, cathepsin L protease; Provisional Back     alignment and domain information
>gnl|CDD|239111 cd02620, Peptidase_C1A_CathepsinB, Cathepsin B group; composed of cathepsin B and similar proteins, including tubulointerstitial nephritis antigen (TIN-Ag) Back     alignment and domain information
>gnl|CDD|239110 cd02619, Peptidase_C1, C1 Peptidase family (MEROPS database nomenclature), also referred to as the papain family; composed of two subfamilies of cysteine peptidases (CPs), C1A (papain) and C1B (bleomycin hydrolase) Back     alignment and domain information
>gnl|CDD|239112 cd02621, Peptidase_C1A_CathepsinC, Cathepsin C; also known as Dipeptidyl Peptidase I (DPPI), an atypical papain-like cysteine peptidase with chloride dependency and dipeptidyl aminopeptidase activity, resulting from its tetrameric structure which limits substrate access Back     alignment and domain information
>gnl|CDD|239149 cd02698, Peptidase_C1A_CathepsinX, Cathepsin X; the only papain-like lysosomal cysteine peptidase exhibiting carboxymonopeptidase activity Back     alignment and domain information
>gnl|CDD|214853 smart00848, Inhibitor_I29, Cathepsin propeptide inhibitor domain (I29) Back     alignment and domain information
>gnl|CDD|219764 pfam08246, Inhibitor_I29, Cathepsin propeptide inhibitor domain (I29) Back     alignment and domain information
>gnl|CDD|227207 COG4870, COG4870, Cysteine protease [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>gnl|CDD|240381 PTZ00364, PTZ00364, dipeptidyl-peptidase I precursor; Provisional Back     alignment and domain information
>gnl|CDD|240244 PTZ00049, PTZ00049, cathepsin C-like protein; Provisional Back     alignment and domain information
>gnl|CDD|185641 PTZ00462, PTZ00462, Serine-repeat antigen protein; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 346
KOG1542372 consensus Cysteine proteinase Cathepsin F [Posttra 100.0
PTZ00203348 cathepsin L protease; Provisional 100.0
PTZ00021489 falcipain-2; Provisional 100.0
PTZ00200448 cysteine proteinase; Provisional 100.0
KOG1543325 consensus Cysteine proteinase Cathepsin L [Posttra 100.0
cd02621243 Peptidase_C1A_CathepsinC Cathepsin C; also known a 100.0
cd02698239 Peptidase_C1A_CathepsinX Cathepsin X; the only pap 100.0
cd02248210 Peptidase_C1A Peptidase C1A subfamily (MEROPS data 100.0
cd02620236 Peptidase_C1A_CathepsinB Cathepsin B group; compos 100.0
PF00112219 Peptidase_C1: Papain family cysteine protease This 100.0
PTZ00049693 cathepsin C-like protein; Provisional 100.0
PTZ00364548 dipeptidyl-peptidase I precursor; Provisional 100.0
smart00645174 Pept_C1 Papain family cysteine protease. 100.0
cd02619223 Peptidase_C1 C1 Peptidase family (MEROPS database 100.0
PTZ00462 1004 Serine-repeat antigen protein; Provisional 100.0
KOG1544470 consensus Predicted cysteine proteinase TIN-ag [Ge 100.0
COG4870372 Cysteine protease [Posttranslational modification, 99.97
cd00585437 Peptidase_C1B Peptidase C1B subfamily (MEROPS data 99.91
PF03051438 Peptidase_C1_2: Peptidase C1-like family This fami 99.72
PF0824658 Inhibitor_I29: Cathepsin propeptide inhibitor doma 99.7
smart0084857 Inhibitor_I29 Cathepsin propeptide inhibitor domai 99.54
COG3579444 PepC Aminopeptidase C [Amino acid transport and me 98.98
KOG4128 457 consensus Bleomycin hydrolases and aminopeptidases 97.65
PF13529144 Peptidase_C39_2: Peptidase_C39 like family; PDB: 3 97.18
PF05543175 Peptidase_C47: Staphopain peptidase C47; InterPro: 96.01
PF0812741 Propeptide_C1: Peptidase family C1 propeptide; Int 95.92
PF14399 317 Transpep_BrtH: NlpC/p60-like transpeptidase 91.17
COG4990195 Uncharacterized protein conserved in bacteria [Fun 83.73
>KOG1542 consensus Cysteine proteinase Cathepsin F [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information 
Probab=100.00  E-value=8.8e-84  Score=574.42  Aligned_cols=297  Identities=41%  Similarity=0.752  Sum_probs=262.0

Q ss_pred             HHHHHHHHHHHHhCCccCChHHHHHHHHHHHHHHHHHHHHcccCCCCCeEEecccCCCCChHHHhcccCCCcCC-CCccc
Q 042468           34 TMNERHEMWMAQYGRVYRDNAEKEMRFKIFKENVEYIASFNNKARNKPYKLGINEFADQTNEEFRAPRNGYKRR-LPSVR  112 (346)
Q Consensus        34 ~~~~~f~~~~~~~~k~Y~~~~e~~~R~~~f~~n~~~I~~~N~~~~~~s~~~g~N~FsD~t~eEf~~~~~~~~~~-~~~~~  112 (346)
                      ...+.|..|+.+|+|+|.+.+|...|+.+|+.|+..+++++. ....|.++|+|+|||||+|||++++++.+.. .... 
T Consensus        66 ~~~~~F~~F~~kf~r~Y~s~eE~~~Rl~iF~~N~~~a~~~q~-~d~gsA~yGvtqFSDlT~eEFkk~~l~~~~~~~~~~-  143 (372)
T KOG1542|consen   66 GLEDSFKLFTIKFGRSYASREEHAHRLSIFKHNLLRAERLQE-NDPGSAEYGVTQFSDLTEEEFKKIYLGVKRRGSKLP-  143 (372)
T ss_pred             chHHHHHHHHHhcCcccCcHHHHHHHHHHHHHHHHHHHHhhh-cCccccccCccchhhcCHHHHHHHhhccccccccCc-
Confidence            448899999999999999999999999999999999999998 3334899999999999999999998877652 1111 


Q ss_pred             CCCCcccccccCC-CCCCceeeccCCCCCCccCCCCCCccHHHHHHHHHHHHHHHHhcCCCccCChHHHhhhcCCCCCCC
Q 042468          113 SSETTDVSFRYEN-ASVPASIDWRKKGAVTGVKDQGQCGCCWAFSAVAAMEGINHITTRKLTSLSEQELVDCDTSGEDQG  191 (346)
Q Consensus       113 ~~~~~~~~~~~~~-~~lP~~~Dwr~~~~v~pV~dQg~cgsCwAfA~~~~~e~~~~~~~~~~~~lS~q~l~dc~~~~~~~g  191 (346)
                         ......+..+ ..||++||||++|.||||||||+||||||||+++++|++.+++++++++||||+|+||+..  ++|
T Consensus       144 ---~~~~~~~~~~~~~lP~~fDWR~kgaVTpVKnQG~CGSCWAFS~tG~vEga~~i~~g~LvsLSEQeLvDCD~~--d~g  218 (372)
T KOG1542|consen  144 ---GDAAEAPIEPGESLPESFDWRDKGAVTPVKNQGMCGSCWAFSTTGAVEGAWAIATGKLVSLSEQELVDCDSC--DNG  218 (372)
T ss_pred             ---cccccCcCCCCCCCCcccchhccCCccccccCCcCcchhhhhhhhhhhhHHHhhcCcccccchhhhhcccCc--CCc
Confidence               1111111122 2899999999999999999999999999999999999999999999999999999999975  899


Q ss_pred             CCCCChHHHHHHHHHhCCCCCCCCCCCcCCCC-CcCCCCCCCCceEeeeeEecCCChHHHHHHHHH-cCCeEEEEEccCc
Q 042468          192 CEGGLMDDAFEFIISNKGLATEAKYPYKASDG-SCNKKEANPSAAKISGYEDVPSNNEAALMKAVA-NQPVSVAIDASGS  269 (346)
Q Consensus       192 c~GG~~~~a~~~~~~~~G~~~e~~~PY~~~~~-~c~~~~~~~~~~~i~~~~~~~~~~~~~i~~~l~-~gPv~v~~~~~~~  269 (346)
                      |+||.+..|++|+++..|+..|++|||++..+ .|... .....+.|.+|..++ .++++|.+.|. +|||+|+|++.  
T Consensus       219 C~GGl~~nA~~~~~~~gGL~~E~dYPY~g~~~~~C~~~-~~~~~v~I~~f~~l~-~nE~~ia~wLv~~GPi~vgiNa~--  294 (372)
T KOG1542|consen  219 CNGGLMDNAFKYIKKAGGLEKEKDYPYTGKKGNQCHFD-KSKIVVSIKDFSMLS-NNEDQIAAWLVTFGPLSVGINAK--  294 (372)
T ss_pred             CCCCChhHHHHHHHHhCCccccccCCccccCCCccccc-hhhceEEEeccEecC-CCHHHHHHHHHhcCCeEEEEchH--
Confidence            99999999999988888999999999999887 89988 467889999999998 58999988888 79999999976  


Q ss_pred             cccccCCCeEeCC---CCCC-CCeEEEEEEeeccCCCccEEEEEcCCCCCCCCCceEEEEecCCCCCCCcccccccceee
Q 042468          270 DFQFYSSGVFTGQ---CGTE-LDHGVTAVGYGTADDGTKYWLVKNSWGTTWGENGYIRMQRDIDAKEGLCGIAMQASYPT  345 (346)
Q Consensus       270 ~f~~y~~gi~~~~---~~~~-~~Hav~iVGyg~~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~~~~~~~Cgi~~~~~~p~  345 (346)
                      .++.|.+||..+.   |+.. ++|||+|||||...-.++|||||||||++|||+||+|+.||.    |.|||+++++-+.
T Consensus       295 ~mQ~YrgGV~~P~~~~Cs~~~~~HaVLlvGyG~~g~~~PYWIVKNSWG~~WGE~GY~~l~RG~----N~CGi~~mvss~~  370 (372)
T KOG1542|consen  295 PMQFYRGGVSCPSKYICSPKLLNHAVLLVGYGSSGYEKPYWIVKNSWGTSWGEKGYYKLCRGS----NACGIADMVSSAA  370 (372)
T ss_pred             HHHHhcccccCCCcccCCccccCceEEEEeecCCCCCCceEEEECCccccccccceEEEeccc----cccccccchhhhh
Confidence            7999999999983   8754 999999999998743799999999999999999999999997    5699999988664

>PTZ00203 cathepsin L protease; Provisional Back     alignment and domain information
>PTZ00021 falcipain-2; Provisional Back     alignment and domain information
>PTZ00200 cysteine proteinase; Provisional Back     alignment and domain information
>KOG1543 consensus Cysteine proteinase Cathepsin L [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>cd02621 Peptidase_C1A_CathepsinC Cathepsin C; also known as Dipeptidyl Peptidase I (DPPI), an atypical papain-like cysteine peptidase with chloride dependency and dipeptidyl aminopeptidase activity, resulting from its tetrameric structure which limits substrate access Back     alignment and domain information
>cd02698 Peptidase_C1A_CathepsinX Cathepsin X; the only papain-like lysosomal cysteine peptidase exhibiting carboxymonopeptidase activity Back     alignment and domain information
>cd02248 Peptidase_C1A Peptidase C1A subfamily (MEROPS database nomenclature); composed of cysteine peptidases (CPs) similar to papain, including the mammalian CPs (cathepsins B, C, F, H, L, K, O, S, V, X and W) Back     alignment and domain information
>cd02620 Peptidase_C1A_CathepsinB Cathepsin B group; composed of cathepsin B and similar proteins, including tubulointerstitial nephritis antigen (TIN-Ag) Back     alignment and domain information
>PF00112 Peptidase_C1: Papain family cysteine protease This is family C1 in the peptidase classification Back     alignment and domain information
>PTZ00049 cathepsin C-like protein; Provisional Back     alignment and domain information
>PTZ00364 dipeptidyl-peptidase I precursor; Provisional Back     alignment and domain information
>smart00645 Pept_C1 Papain family cysteine protease Back     alignment and domain information
>cd02619 Peptidase_C1 C1 Peptidase family (MEROPS database nomenclature), also referred to as the papain family; composed of two subfamilies of cysteine peptidases (CPs), C1A (papain) and C1B (bleomycin hydrolase) Back     alignment and domain information
>PTZ00462 Serine-repeat antigen protein; Provisional Back     alignment and domain information
>KOG1544 consensus Predicted cysteine proteinase TIN-ag [General function prediction only] Back     alignment and domain information
>COG4870 Cysteine protease [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>cd00585 Peptidase_C1B Peptidase C1B subfamily (MEROPS database nomenclature); composed of eukaryotic bleomycin hydrolases (BH) and bacterial aminopeptidases C (pepC) Back     alignment and domain information
>PF03051 Peptidase_C1_2: Peptidase C1-like family This family is a subfamily of the Prosite entry; InterPro: IPR004134 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families Back     alignment and domain information
>PF08246 Inhibitor_I29: Cathepsin propeptide inhibitor domain (I29); InterPro: IPR013201 Peptide proteinase inhibitors can be found as single domain proteins or as single or multiple domains within proteins; these are referred to as either simple or compound inhibitors, respectively Back     alignment and domain information
>smart00848 Inhibitor_I29 Cathepsin propeptide inhibitor domain (I29) Back     alignment and domain information
>COG3579 PepC Aminopeptidase C [Amino acid transport and metabolism] Back     alignment and domain information
>KOG4128 consensus Bleomycin hydrolases and aminopeptidases of cysteine protease family [Amino acid transport and metabolism] Back     alignment and domain information
>PF13529 Peptidase_C39_2: Peptidase_C39 like family; PDB: 3ERV_A Back     alignment and domain information
>PF05543 Peptidase_C47: Staphopain peptidase C47; InterPro: IPR008750 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families Back     alignment and domain information
>PF08127 Propeptide_C1: Peptidase family C1 propeptide; InterPro: IPR012599 This domain is found at the N-terminal of cathepsin B and cathepsin B-like peptidases that belong to MEROPS peptidase subfamily C1A Back     alignment and domain information
>PF14399 Transpep_BrtH: NlpC/p60-like transpeptidase Back     alignment and domain information
>COG4990 Uncharacterized protein conserved in bacteria [Function unknown] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query346
1s4v_A229 The 2.0 A Crystal Structure Of The Kdel-Tailed Cyst 2e-91
2fo5_A262 Crystal Structure Of Recombinant Barley Cysteine En 8e-84
3p5w_A220 Actinidin From Actinidia Arguta Planch (Sarusashi) 7e-73
3p5u_A220 Actinidin From Actinidia Arguta Planch (Sarusashi) 1e-71
1pci_A322 Procaricain Length = 322 3e-70
1cqd_A221 The 2.1 Angstrom Structure Of A Cysteine Protease W 6e-70
3tnx_A363 Structure Of The Precursor Of A Thermostable Varian 3e-69
1iwd_A215 Proposed Amino Acid Sequence And The 1.63 Angstrom 4e-69
1aec_A218 Crystal Structure Of Actinidin-E-64 Complex+ Length 2e-68
1cjl_A312 Crystal Structure Of A Cysteine Protease Proform Le 1e-65
1cs8_A316 Crystal Structure Of Procathepsin L Length = 316 2e-65
2act_A220 Crystallographic Refinement Of The Structure Of Act 7e-65
3hwn_A258 Cathepsin L With Az13010160 Length = 258 1e-62
1o0e_A208 1.9 Angstrom Crystal Structure Of A Plant Cysteine 2e-62
2pns_A208 1.9 Angstrom Resolution Crystal Structure Of A Plan 3e-62
7pck_A314 Crystal Structure Of Wild Type Human Procathepsin K 1e-61
2c0y_A315 The Crystal Structure Of A Cys25ala Mutant Of Human 3e-61
1yal_A218 Carica Papaya Chymopapain At 1.7 Angstroms Resoluti 8e-61
3bcn_A209 Crystal Structure Of A Papain-Like Cysteine Proteas 2e-60
2bdz_A214 Mexicain From Jacaratia Mexicana Length = 214 3e-60
3u8e_A222 Crystal Structure Of Cysteine Protease From Bulbs O 7e-59
1ppo_A216 Determination Of The Structure Of Papaya Protease O 1e-58
3f75_A224 Activated Toxoplasma Gondii Cathepsin L (Tgcpl) In 1e-58
1meg_A216 Crystal Structure Of A Caricain D158e Mutant In Com 3e-58
3qt4_A329 Structure Of Digestive Procathepsin L 3 Of Tenebrio 2e-56
1fh0_A221 Crystal Structure Of Human Cathepsin V Complexed Wi 2e-56
3h89_A220 A Combined Crystallographic And Molecular Dynamics 3e-56
3of8_A221 Structural Basis For Reversible And Irreversible In 3e-56
3hha_A220 Crystal Structure Of Cathepsin L In Complex With Az 3e-56
1khp_A212 Monoclinic Form Of Papain/zlfg-dam Covalent Complex 4e-56
2o6x_A310 Crystal Structure Of Procathepsin L1 From Fasciola 4e-56
1pip_A212 Crystal Structure Of Papain-Succinyl-Gln-Val-Val-Al 1e-55
3h6s_A221 Strucure Of Clitocypin - Cathepsin V Complex Length 2e-55
2nqd_B221 Crystal Structure Of Cysteine Protease Inhibitor, C 3e-55
1ppp_A212 Crystal Structure Of Papain-E64-C Complex. Binding 3e-55
3iv2_A220 Crystal Structure Of Mature Apo-Cathepsin L C25a Mu 3e-55
3bc3_A220 Exploring Inhibitor Binding At The S Subsites Of Ca 5e-55
2cio_A212 The High Resolution X-Ray Structure Of Papain Compl 6e-55
3ima_A212 Complex Strcuture Of Tarocystatin And Papain Length 6e-55
3kse_A220 Unreduced Cathepsin L In Complex With Stefin A Leng 6e-55
1stf_E212 The Refined 2.4 Angstroms X-Ray Crystal Structure O 2e-54
2f7d_A215 A Mutant Rabbit Cathepsin K With A Nitrile Inhibito 6e-54
1gec_E216 Glycyl Endopeptidase-complex With Benzyloxycarbonyl 8e-54
1snk_A214 Cathepsin K Complexed With Carbamate Derivatized No 4e-53
1u9v_A217 Crystal Structure Of The Cysteine Protease Human Ca 4e-53
1mem_A215 Crystal Structure Of Cathepsin K Complexed With A P 4e-53
1vsn_A215 Crystal Structure Of A Potent Small Molecule Inhibi 5e-53
3h7d_A215 The Crystal Structure Of The Cathepsin K Variant M5 9e-53
2f1g_A220 Cathepsin S In Complex With Non-Covalent 2-(Benzoxa 1e-52
1ms6_A222 Dipeptide Nitrile Inhibitor Bound To Cathepsin S. L 2e-52
3n3g_A217 4-(3-Trifluoromethylphenyl)-Pyrimidine-2-Carbonitri 2e-52
3ovx_A218 Cathepsin S In Complex With A Covalent Inhibitor Wi 2e-52
3ovz_A213 Cathepsin K In Complex With A Covalent Inhibitor Wi 2e-52
2fq9_A225 Cathepsin S With Nitrile Inhibitor Length = 225 3e-52
1npz_A217 Crystal Structures Of Cathepsin S Inhibitor Complex 4e-52
2vhs_A217 Cathsilicatein, A Chimera Length = 217 5e-52
2fye_A217 Mutant Human Cathepsin S With Irreversible Inhibito 6e-52
2g6d_A217 Human Cathepsin S Mutant With Vinyl Sulfone Inhibit 6e-52
3iej_A222 Pyrazole-Based Cathepsin S Inhibitors With Arylalky 1e-51
3mpe_A220 Crystal Structure Of Human Cathepsin-S C25s Mutant 3e-51
3kwn_A219 Cathepsin S In Complex With Thioether Acetamide P3 3e-51
1glo_A217 Crystal Structure Of Cys25ser Mutant Of Human Cathe 4e-51
3ioq_A213 Crystal Structure Of The Carica Candamarcensis Cyst 1e-50
3qj3_A331 Structure Of Digestive Procathepsin L2 Proteinase F 4e-50
2b1m_A246 Crystal Structure Of A Papain-Fold Protein Without 2e-46
8pch_A220 Crystal Structure Of Porcine Cathepsin H Determined 1e-44
2p7u_A215 The Crystal Structure Of Rhodesain, The Major Cyste 1e-44
1ewp_A215 Cruzain Bound To Mor-Leu-Hpq Length = 215 2e-42
3iut_A221 The Crystal Structure Of Cruzain In Complex With A 2e-42
3hd3_A215 High Resolution Crystal Structure Of Cruzain Bound 2e-42
1aim_A215 Cruzain Inhibited By Benzoyl-Tyrosine-Alanine-Fluor 3e-42
1icf_A175 Crystal Structure Of Mhc Class Ii Associated P41 Ii 2e-41
1mhw_A175 Design Of Non-covalent Inhibitors Of Human Cathepsi 3e-40
1yvb_A241 The Plasmodium Falciparum Cysteine Protease Falcipa 1e-38
3bpm_A243 Crystal Structure Of Falcipain-3 With Its Inhibitor 9e-38
3pnr_A240 Structure Of Pbicp-C In Complex With Falcipain-2 Le 2e-37
1m6d_A214 Crystal Structure Of Human Cathepsin F Length = 214 4e-30
1xkg_A312 Crystal Structure Of The Major House Dust Mite Alle 4e-27
3pdf_A441 Discovery Of Novel Cyanamide-Based Inhibitors Of Ca 1e-26
2as8_A222 Crystal Structure Of Mature And Fully Active Der P 2e-26
3rvw_A222 Crystal Structure Of Der P 1 Complexed With Fab 4c1 4e-26
1jqp_A438 Dipeptidyl Peptidase I (Cathepsin C), A Tetrameric 1e-25
3d6s_A223 Crystal Structure Of Mite Allergen Der F 1 Length = 1e-25
3f5v_A222 C2 Crystal Form Of Mite Allergen Der P 1 Length = 2 4e-25
1pbh_A317 Crystal Structure Of Human Recombinant Procathepsin 3e-21
1gmy_A261 Cathepsin B Complexed With Dipeptidyl Nitrile Inhib 2e-20
3ai8_B256 Cathepsin B In Complex With The Nitroxoline Length 3e-20
3k9m_A254 Cathepsin B In Complex With Stefin A Length = 254 3e-20
3cbj_A266 Chagasin-cathepsin B Complex Length = 266 2e-19
3qsd_A254 Structure Of Cathepsin B1 From Schistosoma Mansoni 1e-17
1cpj_A260 Crystal Structures Of Recombinant Rat Cathepsin B A 1e-17
1deu_A277 Crystal Structure Of Human Procathepsin X: A Cystei 3e-17
1cte_A254 Crystal Structures Of Recombinant Rat Cathepsin B A 6e-17
1mir_A322 Rat Procathepsin B Length = 322 8e-17
1ef7_A242 Crystal Structure Of Human Cathepsin X Length = 242 1e-16
4hwy_A340 Trypanosoma Brucei Procathepsin B Solved From 40 Fs 1e-14
3mor_A317 Crystal Structure Of Cathepsin B From Trypanosoma B 1e-14
1ito_A256 Crystal Structure Analysis Of Bovine Spleen Catheps 2e-14
3hhi_A325 Crystal Structure Of Cathepsin B From T. Brucei In 2e-14
1qdq_A253 X-Ray Crystal Structure Of Bovine Cathepsin B-Ca074 5e-14
1k3b_B164 Crystal Structure Of Human Dipeptidyl Peptidase I ( 2e-12
1huc_B205 The Refined 2.15 Angstroms X-Ray Crystal Structure 8e-12
3ch2_X265 Crystal Structure Analysis Of Sera5e From Plasmodiu 3e-10
2wbf_X265 Crystal Structure Analysis Of Sera5e From Plasmodiu 4e-10
1k3b_C69 Crystal Structure Of Human Dipeptidyl Peptidase I ( 6e-09
1icf_B42 Crystal Structure Of Mhc Class Ii Associated P41 Ii 8e-08
1sp4_B205 Crystal Structure Of Ns-134 In Complex With Bovine 1e-06
3f75_P106 Activated Toxoplasma Gondii Cathepsin L (Tgcpl) In 2e-05
3ois_A291 Crystal Structure Xylellain, A Cysteine Protease Fr 9e-05
>pdb|1S4V|A Chain A, The 2.0 A Crystal Structure Of The Kdel-Tailed Cysteine Endopeptidase Functioning In Programmed Cell Death Of Ricinus Communis Endosperm Length = 229 Back     alignment and structure 
Iteration: 1

 Score =  332 bits (850), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 158/218 (72%), Positives = 175/218 (80%), Gaps = 1/218 (0%)
Query: 127 SVPASIDWRKKGAVTGVKDQGQCGCCWAFSAVAAMEGINHITTRKLTSLSEQELVDCDTS 186
           +VPAS+DWRKKGAVT VKDQGQCG CWAFS + A+EGIN I T KL SLSEQELVDCDT 
Sbjct: 1   TVPASVDWRKKGAVTSVKDQGQCGSCWAFSTIVAVEGINQIKTNKLVSLSEQELVDCDTD 60
Query: 187 GEDQGCEGGLMDDAFEFIISNKGLATEAKYPYKASDGSCNKKEANPSAAKISGYEDVPSN 246
            ++QGC GGLMD AFEFI    G+ TEA YPY+A DG+C+  + N  A  I G+E+VP N
Sbjct: 61  -QNQGCNGGLMDYAFEFIKQRGGITTEANYPYEAYDGTCDVSKENAPAVSIDGHENVPEN 119
Query: 247 NEAALMKAVANQPVSVAIDASGSDFQFYSSGVFTGQCGTELDHGVTAVGYGTADDGTKYW 306
           +E AL+KAVANQPVSVAIDA GSDFQFYS GVFTG CGTELDHGV  VGYGT  DGTKYW
Sbjct: 120 DENALLKAVANQPVSVAIDAGGSDFQFYSEGVFTGSCGTELDHGVAIVGYGTTIDGTKYW 179
Query: 307 LVKNSWGTTWGENGYIRMQRDIDAKEGLCGIAMQASYP 344
            VKNSWG  WGE GYIRM+R I  KEGLCGIAM+ASYP
Sbjct: 180 TVKNSWGPEWGEKGYIRMERGISDKEGLCGIAMEASYP 217
>pdb|2FO5|A Chain A, Crystal Structure Of Recombinant Barley Cysteine Endoprotease B Isoform 2 (Ep-B2) In Complex With Leupeptin Length = 262 Back     alignment and structure
>pdb|3P5W|A Chain A, Actinidin From Actinidia Arguta Planch (Sarusashi) Length = 220 Back     alignment and structure
>pdb|3P5U|A Chain A, Actinidin From Actinidia Arguta Planch (Sarusashi) Length = 220 Back     alignment and structure
>pdb|1PCI|A Chain A, Procaricain Length = 322 Back     alignment and structure
>pdb|1CQD|A Chain A, The 2.1 Angstrom Structure Of A Cysteine Protease With Proline Specificity From Ginger Rhizome, Zingiber Officinale Length = 221 Back     alignment and structure
>pdb|3TNX|A Chain A, Structure Of The Precursor Of A Thermostable Variant Of Papain At 2.6 Angstroem Resolution Length = 363 Back     alignment and structure
>pdb|1IWD|A Chain A, Proposed Amino Acid Sequence And The 1.63 Angstrom X-ray Crystal Structure Of A Plant Cysteine Protease Ervatamin B: Insight Into The Structural Basis Of Its Stability And Substrate Specificity Length = 215 Back     alignment and structure
>pdb|1AEC|A Chain A, Crystal Structure Of Actinidin-E-64 Complex+ Length = 218 Back     alignment and structure
>pdb|1CJL|A Chain A, Crystal Structure Of A Cysteine Protease Proform Length = 312 Back     alignment and structure
>pdb|1CS8|A Chain A, Crystal Structure Of Procathepsin L Length = 316 Back     alignment and structure
>pdb|2ACT|A Chain A, Crystallographic Refinement Of The Structure Of Actinidin At 1.7 Angstroms Resolution By Fast Fourier Least-Squares Methods Length = 220 Back     alignment and structure
>pdb|3HWN|A Chain A, Cathepsin L With Az13010160 Length = 258 Back     alignment and structure
>pdb|1O0E|A Chain A, 1.9 Angstrom Crystal Structure Of A Plant Cysteine Protease Ervatamin C Length = 208 Back     alignment and structure
>pdb|2PNS|A Chain A, 1.9 Angstrom Resolution Crystal Structure Of A Plant Cysteine Protease Ervatamin-C Refinement With Cdna Derived Amino Acid Sequence Length = 208 Back     alignment and structure
>pdb|7PCK|A Chain A, Crystal Structure Of Wild Type Human Procathepsin K Length = 314 Back     alignment and structure
>pdb|2C0Y|A Chain A, The Crystal Structure Of A Cys25ala Mutant Of Human Procathepsin S Length = 315 Back     alignment and structure
>pdb|1YAL|A Chain A, Carica Papaya Chymopapain At 1.7 Angstroms Resolution Length = 218 Back     alignment and structure
>pdb|3BCN|A Chain A, Crystal Structure Of A Papain-Like Cysteine Protease Ervatamin-A Complexed With Irreversible Inhibitor E-64 Length = 209 Back     alignment and structure
>pdb|2BDZ|A Chain A, Mexicain From Jacaratia Mexicana Length = 214 Back     alignment and structure
>pdb|3U8E|A Chain A, Crystal Structure Of Cysteine Protease From Bulbs Of Crocus Sativus At 1.3 A Resolution Length = 222 Back     alignment and structure
>pdb|1PPO|A Chain A, Determination Of The Structure Of Papaya Protease Omega Length = 216 Back     alignment and structure
>pdb|3F75|A Chain A, Activated Toxoplasma Gondii Cathepsin L (Tgcpl) In Complex With Its Propeptide Length = 224 Back     alignment and structure
>pdb|1MEG|A Chain A, Crystal Structure Of A Caricain D158e Mutant In Complex With E-64 Length = 216 Back     alignment and structure
>pdb|3QT4|A Chain A, Structure Of Digestive Procathepsin L 3 Of Tenebrio Molitor Larval Midgut Length = 329 Back     alignment and structure
>pdb|1FH0|A Chain A, Crystal Structure Of Human Cathepsin V Complexed With An Irreversible Vinyl Sulfone Inhibitor Length = 221 Back     alignment and structure
>pdb|3H89|A Chain A, A Combined Crystallographic And Molecular Dynamics Study Of Cathepsin-L Retro-Binding Inhibitors(Compound 4) Length = 220 Back     alignment and structure
>pdb|3OF8|A Chain A, Structural Basis For Reversible And Irreversible Inhibition Of Human Cathepsin L By Their Respective Dipeptidyl Glyoxal And Diazomethylketone Inhibitors Length = 221 Back     alignment and structure
>pdb|3HHA|A Chain A, Crystal Structure Of Cathepsin L In Complex With Az12878478 Length = 220 Back     alignment and structure
>pdb|1KHP|A Chain A, Monoclinic Form Of Papain/zlfg-dam Covalent Complex Length = 212 Back     alignment and structure
>pdb|2O6X|A Chain A, Crystal Structure Of Procathepsin L1 From Fasciola Hepatica Length = 310 Back     alignment and structure
>pdb|1PIP|A Chain A, Crystal Structure Of Papain-Succinyl-Gln-Val-Val-Ala-Ala-P- Nitroanilide Complex At 1.7 Angstroms Resolution: Noncovalent Binding Mode Of A Common Sequence Of Endogenous Thiol Protease Inhibitors Length = 212 Back     alignment and structure
>pdb|3H6S|A Chain A, Strucure Of Clitocypin - Cathepsin V Complex Length = 221 Back     alignment and structure
>pdb|2NQD|B Chain B, Crystal Structure Of Cysteine Protease Inhibitor, Chagasin, In Complex With Human Cathepsin L Length = 221 Back     alignment and structure
>pdb|1PPP|A Chain A, Crystal Structure Of Papain-E64-C Complex. Binding Diversity Of E64-C To Papain S2 And S3 Subsites Length = 212 Back     alignment and structure
>pdb|3IV2|A Chain A, Crystal Structure Of Mature Apo-Cathepsin L C25a Mutant Length = 220 Back     alignment and structure
>pdb|3BC3|A Chain A, Exploring Inhibitor Binding At The S Subsites Of Cathepsin L Length = 220 Back     alignment and structure
>pdb|2CIO|A Chain A, The High Resolution X-Ray Structure Of Papain Complexed With Fragments Of The Trypanosoma Brucei Cysteine Protease Inhibitor Icp Length = 212 Back     alignment and structure
>pdb|3IMA|A Chain A, Complex Strcuture Of Tarocystatin And Papain Length = 212 Back     alignment and structure
>pdb|3KSE|A Chain A, Unreduced Cathepsin L In Complex With Stefin A Length = 220 Back     alignment and structure
>pdb|1STF|E Chain E, The Refined 2.4 Angstroms X-Ray Crystal Structure Of Recombinant Human Stefin B In Complex With The Cysteine Proteinase Papain: A Novel Type Of Proteinase Inhibitor Interaction Length = 212 Back     alignment and structure
>pdb|2F7D|A Chain A, A Mutant Rabbit Cathepsin K With A Nitrile Inhibitor Length = 215 Back     alignment and structure
>pdb|1GEC|E Chain E, Glycyl Endopeptidase-complex With Benzyloxycarbonyl-leucine-valine- Glycine-methylene Covalently Bound To Cysteine 25 Length = 216 Back     alignment and structure
>pdb|1SNK|A Chain A, Cathepsin K Complexed With Carbamate Derivatized Norleucine Aldehyde Length = 214 Back     alignment and structure
>pdb|1U9V|A Chain A, Crystal Structure Of The Cysteine Protease Human Cathepsin K In Complex With The Covalent Inhibitor Nvp-Abe854 Length = 217 Back     alignment and structure
>pdb|1MEM|A Chain A, Crystal Structure Of Cathepsin K Complexed With A Potent Vinyl Sulfone Inhibitor Length = 215 Back     alignment and structure
>pdb|1VSN|A Chain A, Crystal Structure Of A Potent Small Molecule Inhibitor Bound To Cathepsin K Length = 215 Back     alignment and structure
>pdb|3H7D|A Chain A, The Crystal Structure Of The Cathepsin K Variant M5 In Compl Chondroitin-4-Sulfate Length = 215 Back     alignment and structure
>pdb|2F1G|A Chain A, Cathepsin S In Complex With Non-Covalent 2-(Benzoxazol-2-Ylamino)- Acetamide Length = 220 Back     alignment and structure
>pdb|1MS6|A Chain A, Dipeptide Nitrile Inhibitor Bound To Cathepsin S. Length = 222 Back     alignment and structure
>pdb|3N3G|A Chain A, 4-(3-Trifluoromethylphenyl)-Pyrimidine-2-Carbonitrile As Cathepsin S Inhibitors: N3, Not N1 Is Critically Important Length = 217 Back     alignment and structure
>pdb|3OVX|A Chain A, Cathepsin S In Complex With A Covalent Inhibitor With An Aldehyde Warhead Length = 218 Back     alignment and structure
>pdb|3OVZ|A Chain A, Cathepsin K In Complex With A Covalent Inhibitor With A Ketoamide Warhead Length = 213 Back     alignment and structure
>pdb|2FQ9|A Chain A, Cathepsin S With Nitrile Inhibitor Length = 225 Back     alignment and structure
>pdb|1NPZ|A Chain A, Crystal Structures Of Cathepsin S Inhibitor Complexes Length = 217 Back     alignment and structure
>pdb|2VHS|A Chain A, Cathsilicatein, A Chimera Length = 217 Back     alignment and structure
>pdb|2FYE|A Chain A, Mutant Human Cathepsin S With Irreversible Inhibitor Cra- 14013 Length = 217 Back     alignment and structure
>pdb|2G6D|A Chain A, Human Cathepsin S Mutant With Vinyl Sulfone Inhibitor Cra- 14009 Length = 217 Back     alignment and structure
>pdb|3IEJ|A Chain A, Pyrazole-Based Cathepsin S Inhibitors With Arylalkynes As P1 Binding Elements Length = 222 Back     alignment and structure
>pdb|3MPE|A Chain A, Crystal Structure Of Human Cathepsin-S C25s Mutant With Bound Drug Length = 220 Back     alignment and structure
>pdb|3KWN|A Chain A, Cathepsin S In Complex With Thioether Acetamide P3 Inhibitor Length = 219 Back     alignment and structure
>pdb|1GLO|A Chain A, Crystal Structure Of Cys25ser Mutant Of Human Cathepsin S Length = 217 Back     alignment and structure
>pdb|3IOQ|A Chain A, Crystal Structure Of The Carica Candamarcensis Cysteine Protease Cms1ms2 In Complex With E-64 Length = 213 Back     alignment and structure
>pdb|3QJ3|A Chain A, Structure Of Digestive Procathepsin L2 Proteinase From Tenebrio Molitor Larval Midgut Length = 331 Back     alignment and structure
>pdb|2B1M|A Chain A, Crystal Structure Of A Papain-Fold Protein Without The Catalytic Cysteine From Seeds Of Pachyrhizus Erosus Length = 246 Back     alignment and structure
>pdb|8PCH|A Chain A, Crystal Structure Of Porcine Cathepsin H Determined At 2.1 Angstrom Resolution: Location Of The Mini-Chain C-Terminal Carboxyl Group Defines Cathepsin H Aminopeptidase Function Length = 220 Back     alignment and structure
>pdb|2P7U|A Chain A, The Crystal Structure Of Rhodesain, The Major Cysteine Protease Of T. Brucei Rhodesiense, Bound To Inhibitor K777 Length = 215 Back     alignment and structure
>pdb|1EWP|A Chain A, Cruzain Bound To Mor-Leu-Hpq Length = 215 Back     alignment and structure
>pdb|3IUT|A Chain A, The Crystal Structure Of Cruzain In Complex With A Tetrafluorophenoxymethyl Ketone Inhibitor Length = 221 Back     alignment and structure
>pdb|3HD3|A Chain A, High Resolution Crystal Structure Of Cruzain Bound To The Vinyl Sulfone Inhibitor Smdc-256047 Length = 215 Back     alignment and structure
>pdb|1AIM|A Chain A, Cruzain Inhibited By Benzoyl-Tyrosine-Alanine-Fluoromethylketone Length = 215 Back     alignment and structure
>pdb|1ICF|A Chain A, Crystal Structure Of Mhc Class Ii Associated P41 Ii Fragment In Complex With Cathepsin L Length = 175 Back     alignment and structure
>pdb|1MHW|A Chain A, Design Of Non-covalent Inhibitors Of Human Cathepsin L. From The 96- Residue Proregion To Optimized Tripeptides Length = 175 Back     alignment and structure
>pdb|1YVB|A Chain A, The Plasmodium Falciparum Cysteine Protease Falcipain-2 Length = 241 Back     alignment and structure
>pdb|3BPM|A Chain A, Crystal Structure Of Falcipain-3 With Its Inhibitor, Leupeptin Length = 243 Back     alignment and structure
>pdb|3PNR|A Chain A, Structure Of Pbicp-C In Complex With Falcipain-2 Length = 240 Back     alignment and structure
>pdb|1M6D|A Chain A, Crystal Structure Of Human Cathepsin F Length = 214 Back     alignment and structure
>pdb|1XKG|A Chain A, Crystal Structure Of The Major House Dust Mite Allergen Der P 1 In Its Pro Form At 1.61 A Resolution Length = 312 Back     alignment and structure
>pdb|3PDF|A Chain A, Discovery Of Novel Cyanamide-Based Inhibitors Of Cathepsin C Length = 441 Back     alignment and structure
>pdb|2AS8|A Chain A, Crystal Structure Of Mature And Fully Active Der P 1 Allergen Length = 222 Back     alignment and structure
>pdb|3RVW|A Chain A, Crystal Structure Of Der P 1 Complexed With Fab 4c1 Length = 222 Back     alignment and structure
>pdb|1JQP|A Chain A, Dipeptidyl Peptidase I (Cathepsin C), A Tetrameric Cysteine Protease Of The Papain Family Length = 438 Back     alignment and structure
>pdb|3D6S|A Chain A, Crystal Structure Of Mite Allergen Der F 1 Length = 223 Back     alignment and structure
>pdb|3F5V|A Chain A, C2 Crystal Form Of Mite Allergen Der P 1 Length = 222 Back     alignment and structure
>pdb|1PBH|A Chain A, Crystal Structure Of Human Recombinant Procathepsin B At 3.2 Angstrom Resolution Length = 317 Back     alignment and structure
>pdb|1GMY|A Chain A, Cathepsin B Complexed With Dipeptidyl Nitrile Inhibitor Length = 261 Back     alignment and structure
>pdb|3AI8|B Chain B, Cathepsin B In Complex With The Nitroxoline Length = 256 Back     alignment and structure
>pdb|3K9M|A Chain A, Cathepsin B In Complex With Stefin A Length = 254 Back     alignment and structure
>pdb|3CBJ|A Chain A, Chagasin-cathepsin B Complex Length = 266 Back     alignment and structure
>pdb|3QSD|A Chain A, Structure Of Cathepsin B1 From Schistosoma Mansoni In Complex With Ca074 Inhibitor Length = 254 Back     alignment and structure
>pdb|1CPJ|A Chain A, Crystal Structures Of Recombinant Rat Cathepsin B And A Cathepsin B-Inhibitor Complex: Implications For Structure- Based Inhibitor Design Length = 260 Back     alignment and structure
>pdb|1DEU|A Chain A, Crystal Structure Of Human Procathepsin X: A Cysteine Protease With The Proregion Covalently Linked To The Active Site Cysteine Length = 277 Back     alignment and structure
>pdb|1CTE|A Chain A, Crystal Structures Of Recombinant Rat Cathepsin B And A Cathepsin B-Inhibitor Complex: Implications For Structure- Based Inhibitor Design Length = 254 Back     alignment and structure
>pdb|1MIR|A Chain A, Rat Procathepsin B Length = 322 Back     alignment and structure
>pdb|1EF7|A Chain A, Crystal Structure Of Human Cathepsin X Length = 242 Back     alignment and structure
>pdb|4HWY|A Chain A, Trypanosoma Brucei Procathepsin B Solved From 40 Fs Free-electron Laser Pulse Data By Serial Femtosecond X-ray Crystallography Length = 340 Back     alignment and structure
>pdb|3MOR|A Chain A, Crystal Structure Of Cathepsin B From Trypanosoma Brucei Length = 317 Back     alignment and structure
>pdb|1ITO|A Chain A, Crystal Structure Analysis Of Bovine Spleen Cathepsin B- E64c Complex Length = 256 Back     alignment and structure
>pdb|3HHI|A Chain A, Crystal Structure Of Cathepsin B From T. Brucei In Complex With Ca074 Length = 325 Back     alignment and structure
>pdb|1QDQ|A Chain A, X-Ray Crystal Structure Of Bovine Cathepsin B-Ca074 Complex Length = 253 Back     alignment and structure
>pdb|1K3B|B Chain B, Crystal Structure Of Human Dipeptidyl Peptidase I (Cathepsin C): Exclusion Domain Added To An Endopeptidase Framework Creates The Machine For Activation Of Granular Serine Proteases Length = 164 Back     alignment and structure
>pdb|1HUC|B Chain B, The Refined 2.15 Angstroms X-Ray Crystal Structure Of Human Liver Cathepsin B: The Structural Basis For Its Specificity Length = 205 Back     alignment and structure
>pdb|3CH2|X Chain X, Crystal Structure Analysis Of Sera5e From Plasmodium Falciparum Length = 265 Back     alignment and structure
>pdb|2WBF|X Chain X, Crystal Structure Analysis Of Sera5e From Plasmodium Falciparum With Loop 690-700 Ordered Length = 265 Back     alignment and structure
>pdb|1K3B|C Chain C, Crystal Structure Of Human Dipeptidyl Peptidase I (Cathepsin C): Exclusion Domain Added To An Endopeptidase Framework Creates The Machine For Activation Of Granular Serine Proteases Length = 69 Back     alignment and structure
>pdb|1ICF|B Chain B, Crystal Structure Of Mhc Class Ii Associated P41 Ii Fragment In Complex With Cathepsin L Length = 42 Back     alignment and structure
>pdb|1SP4|B Chain B, Crystal Structure Of Ns-134 In Complex With Bovine Cathepsin B: A Two Headed Epoxysuccinyl Inhibitor Extends Along The Whole Active Site Cleft Length = 205 Back     alignment and structure
>pdb|3F75|P Chain P, Activated Toxoplasma Gondii Cathepsin L (Tgcpl) In Complex With Its Propeptide Length = 106 Back     alignment and structure
>pdb|3OIS|A Chain A, Crystal Structure Xylellain, A Cysteine Protease From Xylella Fastidiosa Length = 291 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query346
1pci_A322 Procaricain; zymogen, hydrolase, thiol protease; 3 0.0
2c0y_A315 Procathepsin S; proenzyme, proteinase, hydrolase, 0.0
3qj3_A331 Cathepsin L-like protein; hydrolase, proteinase, l 0.0
1by8_A314 Protein (procathepsin K); hydrolase(sulfhydryl pro 0.0
3qt4_A329 Cathepsin-L-like midgut cysteine proteinase; hydro 0.0
1cs8_A316 Human procathepsin L; prosegment, propeptide, inhi 0.0
2o6x_A310 Procathepsin L1, secreted cathepsin L 1; hydrolase 1e-179
1xkg_A312 DER P I, major mite fecal allergen DER P 1; major 1e-174
1s4v_A229 Cysteine endopeptidase; KDEL ER retention signal, 1e-162
1ppo_A216 Protease omega; hydrolase(thiol protease); 1.80A { 1e-161
3p5u_A220 Actinidin; SAD, cysteine proteinases, hydrolase; 1 1e-160
2fo5_A262 Cysteine proteinase EP-B 2; EP-B2, EPB2, EPB, cyst 1e-158
2cio_A212 Papain; hydrolase/inhibitor, complex hydrolase/inh 1e-157
3ioq_A213 CMS1MS2; caricaceae, cysteine protease, papain fam 1e-157
2bdz_A214 Mexicain; cysteine protease, peptidase_C1, papain- 1e-157
1cqd_A221 Protein (protease II); cysteine protease, glycopro 1e-157
1iwd_A215 Ervatamin B; cysteine protease, alpha-beta protein 1e-156
3f75_A224 Toxopain-2, cathepsin L protease; medical structur 1e-155
1yal_A218 Chymopapain; hydrolase, thiol protease; 1.70A {Car 1e-155
3ovx_A218 Cathepsin S; hydrolase, covalent inhibitor, aldehy 1e-149
2oul_A241 Falcipain 2; cysteine protease, inhibitor, macromo 1e-148
2b1m_A246 SPE31; papain-like, sugar binding protein; HET: NA 1e-148
3bwk_A243 Cysteine protease falcipain-3; malaria, hydrolase; 1e-147
8pch_A220 Cathepsin H; hydrolase, protease, cysteine protein 1e-146
3kwz_A215 Cathepsin K; enzyme inhibitor, covalent reversible 1e-146
3i06_A215 Cruzipain; autocatalytic cleavage, glycoprotein, p 1e-144
2xu3_A220 Cathepsin L1; hydrolase, drug design, thiol protea 1e-143
3f5v_A222 DER P 1 allergen; allergy, asthma, DUST mites, gly 1e-141
1m6d_A214 Cathepsin F, catsf; papain family cysteine proteas 1e-138
1o0e_A208 Ervatamin C; plant cysteine protease, two domain, 1e-135
3pdf_A441 Cathepsin C, dipeptidyl peptidase 1; two domains, 1e-129
2wbf_X265 Serine-repeat antigen protein; SERA, malaria, vacu 1e-121
3u8e_A222 Papain-like cysteine protease; papain-like cystein 1e-115
1deu_A277 Procathepsin X; cysteine protease, proregion, pros 1e-112
3hhi_A325 Cathepsin B-like cysteine protease; occluding loop 1e-109
3pbh_A317 Procathepsin B; thiol protease, cysteine protease, 1e-100
3qsd_A254 Cathepsin B-like peptidase (C01 family); cysteine 3e-96
3cbj_A266 Cathepsin B; cathepsin B, occluding loop, chagas d 2e-89
3ois_A291 Cysteine protease; alpha and beta, hydrolase; HET: 8e-85
3f75_P106 Toxopain-2, cathepsin L propeptide; medical struct 2e-33
2l95_A80 Crammer, LP06209P; cysteine proteinase inhibitor, 4e-22
3pw3_A 383 Aminopeptidase C; bleomycin, cysteine proteinase f 6e-11
3pw3_A383 Aminopeptidase C; bleomycin, cysteine proteinase f 3e-09
2e01_A457 Cysteine proteinase 1; bleomycin hydrolase, thiol 8e-04
>1pci_A Procaricain; zymogen, hydrolase, thiol protease; 3.20A {Carica papaya} SCOP: d.3.1.1 Length = 322 Back     alignment and structure
 Score =  544 bits (1405), Expect = 0.0
 Identities = 143/315 (45%), Positives = 185/315 (58%), Gaps = 10/315 (3%)

Query: 32  DATMNERHEMWMAQYGRVYRDNAEKEMRFKIFKENVEYIASFNNKARNKPYKLGINEFAD 91
              + +    WM  + + Y +  EK  RF+IFK+N+ YI   N   +N  Y LG+NEFAD
Sbjct: 15  TERLIQLFNSWMLNHNKFYENVDEKLYRFEIFKDNLNYIDETN--KKNNSYWLGLNEFAD 72

Query: 92  QTNEEFRAPRNGYKRRLPSVRSSETTDVSFRYENAS-VPASIDWRKKGAVTGVKDQGQCG 150
            +N+EF     G           ++ D  F  E+   +P ++DWRKKGAVT V+ QG CG
Sbjct: 73  LSNDEFNEKYVGSL---IDATIEQSYDEEFINEDIVNLPENVDWRKKGAVTPVRHQGSCG 129

Query: 151 CCWAFSAVAAMEGINHITTRKLTSLSEQELVDCDTSGEDQGCEGGLMDDAFEFIISNKGL 210
            CWAFSAVA +EGIN I T KL  LSEQELVDC+      GC+GG    A E++  N G+
Sbjct: 130 SCWAFSAVATVEGINKIRTGKLVELSEQELVDCERR--SHGCKGGYPPYALEYVAKN-GI 186

Query: 211 ATEAKYPYKASDGSCNKKEANPSAAKISGYEDVPSNNEAALMKAVANQPVSVAIDASGSD 270
              +KYPYKA  G+C  K+      K SG   V  NNE  L+ A+A QPVSV +++ G  
Sbjct: 187 HLRSKYPYKAKQGTCRAKQVGGPIVKTSGVGRVQPNNEGNLLNAIAKQPVSVVVESKGRP 246

Query: 271 FQFYSSGVFTGQCGTELDHGVTAVGYGTADDGTKYWLVKNSWGTTWGENGYIRMQRDIDA 330
           FQ Y  G+F G CGT++D  VTAVGYG    G  Y L+KNSWGT WGE GYIR++R    
Sbjct: 247 FQLYKGGIFEGPCGTKVDGAVTAVGYGK-SGGKGYILIKNSWGTAWGEKGYIRIKRAPGN 305

Query: 331 KEGLCGIAMQASYPT 345
             G+CG+   + YPT
Sbjct: 306 SPGVCGLYKSSYYPT 320
>2c0y_A Procathepsin S; proenzyme, proteinase, hydrolase, thiol protease, prosegment binding loop, glycoprotein, lysosome, protease, zymogen; 2.1A {Homo sapiens} Length = 315 Back     alignment and structure
>3qj3_A Cathepsin L-like protein; hydrolase, proteinase, larVal midgut; 1.85A {Tenebrio molitor} Length = 331 Back     alignment and structure
>1by8_A Protein (procathepsin K); hydrolase(sulfhydryl proteinase), papain; 2.60A {Homo sapiens} SCOP: d.3.1.1 PDB: 7pck_A Length = 314 Back     alignment and structure
>3qt4_A Cathepsin-L-like midgut cysteine proteinase; hydrolase, zymogen, intramolecular DISS bonds, insect larVal midgut; HET: PG4 PG6; 2.11A {Tenebrio molitor} Length = 329 Back     alignment and structure
>1cs8_A Human procathepsin L; prosegment, propeptide, inhibition, hydrolase; HET: OCS; 1.80A {Homo sapiens} SCOP: d.3.1.1 PDB: 1cjl_A 3hwn_A* Length = 316 Back     alignment and structure
>2o6x_A Procathepsin L1, secreted cathepsin L 1; hydrolase, thiol protease, cysteine protease, zymogen, hydro; 1.40A {Fasciola hepatica} Length = 310 Back     alignment and structure
>1xkg_A DER P I, major mite fecal allergen DER P 1; major allergen, cysteine protease, house DUST mite, dermatop pteronyssinus; 1.61A {Dermatophagoides pteronyssinus} SCOP: d.3.1.1 Length = 312 Back     alignment and structure
>1s4v_A Cysteine endopeptidase; KDEL ER retention signal, endosperm, ricinosomes, SEED germi senescence, hydrolase-hydrolase inhibitor complex; 2.00A {Ricinus communis} SCOP: d.3.1.1 Length = 229 Back     alignment and structure
>1ppo_A Protease omega; hydrolase(thiol protease); 1.80A {Carica papaya} SCOP: d.3.1.1 PDB: 1meg_A* Length = 216 Back     alignment and structure
>2fo5_A Cysteine proteinase EP-B 2; EP-B2, EPB2, EPB, cysteine endoprotease, endopeptidase, LEUP hydrolase; HET: AR7; 2.20A {Hordeum vulgare} Length = 262 Back     alignment and structure
>2cio_A Papain; hydrolase/inhibitor, complex hydrolase/inhibitor, ICP, cysteine protease, allergen, protease, thiol protease; 1.5A {Carica papaya} PDB: 1khq_A 1khp_A 1ppn_A 3e1z_B 3ima_A 3lfy_A 9pap_A 1bqi_A* 1bp4_A* 1pad_A 1pe6_A* 1pip_A* 1pop_A* 1ppd_A 1ppp_A* 1stf_E* 2pad_A 4pad_A* 5pad_A* 6pad_A* ... Length = 212 Back     alignment and structure
>3ioq_A CMS1MS2; caricaceae, cysteine protease, papain family, hydrolase; HET: E64 SO4; 1.87A {Carica candamarcensis} Length = 213 Back     alignment and structure
>2bdz_A Mexicain; cysteine protease, peptidase_C1, papain-like, HYDR; HET: E64; 2.10A {Jacaratia mexicana} Length = 214 Back     alignment and structure
>1cqd_A Protein (protease II); cysteine protease, glycoprotein, proline specificity, carboh papain family, hydrolase; HET: NAG FUL FUC; 2.10A {Zingiber officinale} SCOP: d.3.1.1 Length = 221 Back     alignment and structure
>1iwd_A Ervatamin B; cysteine protease, alpha-beta protein, catalytic DYAD, L-DOM domain., hydrolase; 1.63A {Tabernaemontana divaricata} SCOP: d.3.1.1 Length = 215 Back     alignment and structure
>3f75_A Toxopain-2, cathepsin L protease; medical structural genomics of pathogenic protozoa, MSGPP, C protease, parasite, protozoa, hydrolase; 1.99A {Toxoplasma gondii} Length = 224 Back     alignment and structure
>1yal_A Chymopapain; hydrolase, thiol protease; 1.70A {Carica papaya} SCOP: d.3.1.1 PDB: 1gec_E* Length = 218 Back     alignment and structure
>3ovx_A Cathepsin S; hydrolase, covalent inhibitor, aldehyde warhead is covalently bound to Cys25, lysosomeal protein; HET: O64; 1.49A {Homo sapiens} PDB: 2h7j_A* 2f1g_A* 2hh5_B* 2hhn_A* 2hxz_A* 2op3_A* 2frq_A* 2fra_A* 2fq9_A* 2ft2_A* 2fud_A* 2g7y_A* 1ms6_A* 2r9m_A* 2r9n_A* 2r9o_A* 3n3g_A* 3n4c_A* 3mpe_A* 1nqc_A* ... Length = 218 Back     alignment and structure
>2oul_A Falcipain 2; cysteine protease, inhibitor, macromolecular interaction, HY hydrolase inhibitor complex; 2.20A {Plasmodium falciparum} SCOP: d.3.1.1 PDB: 2ghu_A 1yvb_A 3bpf_A* 3pnr_A Length = 241 Back     alignment and structure
>2b1m_A SPE31; papain-like, sugar binding protein; HET: NAG FUC PG4; 2.00A {Pachyrhizus erosus} PDB: 2b1n_A* Length = 246 Back     alignment and structure
>3bwk_A Cysteine protease falcipain-3; malaria, hydrolase; HET: C1P; 2.42A {Plasmodium falciparum} PDB: 3bpm_A* Length = 243 Back     alignment and structure
>8pch_A Cathepsin H; hydrolase, protease, cysteine proteinase, aminopeptidase; HET: NAG BMA; 2.10A {Sus scrofa} SCOP: d.3.1.1 PDB: 1nb3_A* 1nb5_A* Length = 220 Back     alignment and structure
>3kwz_A Cathepsin K; enzyme inhibitor, covalent reversible inhibitor, disease mutation, disulfide bond, glycoprotein, hydrolase, lysosome, protease; HET: KWZ; 1.49A {Homo sapiens} PDB: 1au0_A* 1au2_A* 1au3_A* 1au4_A* 1ayu_A* 1ayv_A* 1ayw_A* 1bgo_A* 1atk_A* 1nl6_A* 1nlj_A* 1q6k_A* 1mem_A* 1yk7_A* 1yk8_A* 1yt7_A* 2ato_A* 2aux_A* 2auz_A* 2bdl_A* ... Length = 215 Back     alignment and structure
>3i06_A Cruzipain; autocatalytic cleavage, glycoprotein, protease, thiol protease, zymogen; HET: QL2; 1.10A {Trypanosoma cruzi} PDB: 1ewm_A* 1ewo_A* 1ewl_A* 1f29_A* 1ewp_A* 1f2b_A* 1f2c_A* 1f2a_A* 1me4_A* 1u9q_X* 2aim_A* 2efm_A* 2oz2_A* 1me3_A* 3kku_A* 3lxs_A* 1aim_A* 3iut_A* 3hd3_A* 2p86_A* ... Length = 215 Back     alignment and structure
>2xu3_A Cathepsin L1; hydrolase, drug design, thiol protease; HET: XU3 BTB; 0.90A {Homo sapiens} PDB: 2xu4_A* 2xu5_A* 2yj2_A* 2yj8_A* 2yj9_A* 2yjb_A* 2yjc_A* 3bc3_A* 3h89_A* 3h8b_A* 3h8c_A* 3of9_A* 3of8_A* 3hha_A* 2xu1_A* 3iv2_A* 3k24_A* 2nqd_B* 3kse_A* 2vhs_A ... Length = 220 Back     alignment and structure
>1m6d_A Cathepsin F, catsf; papain family cysteine protease, hydrolase; HET: MYP; 1.70A {Homo sapiens} SCOP: d.3.1.1 Length = 214 Back     alignment and structure
>1o0e_A Ervatamin C; plant cysteine protease, two domain, stable at PH 2-12, HYDR; 1.90A {Tabernaemontana divaricata} SCOP: d.3.1.1 PDB: 2pns_A* 2pre_A* 3bcn_A* Length = 208 Back     alignment and structure
>3pdf_A Cathepsin C, dipeptidyl peptidase 1; two domains, cystein protease, hydrolase-hydrolase inhibitor; HET: LXV NAG; 1.85A {Homo sapiens} PDB: 1jqp_A* 2djf_B* 1k3b_B* 2djg_B* 2djf_A* 1k3b_A* 2djg_A* 2djf_C* 1k3b_C* 2djg_C* Length = 441 Back     alignment and structure
>2wbf_X Serine-repeat antigen protein; SERA, malaria, vacuole, protease, cathepsin, hydrolase, glycoprotein, thiol protease; HET: DMS; 1.60A {Plasmodium falciparum} PDB: 3ch3_X 3ch2_X Length = 265 Back     alignment and structure
>3u8e_A Papain-like cysteine protease; papain-like cysteine peptidase, peptidase_C1A, hydrolase, in form; 1.31A {Crocus sativus} Length = 222 Back     alignment and structure
>1deu_A Procathepsin X; cysteine protease, proregion, prosegment, HY; 1.70A {Homo sapiens} SCOP: d.3.1.1 PDB: 1ef7_A Length = 277 Back     alignment and structure
>3hhi_A Cathepsin B-like cysteine protease; occluding loop, hydrolase, THIO protease; HET: 074; 1.60A {Trypanosoma brucei} PDB: 3mor_A* Length = 325 Back     alignment and structure
>3pbh_A Procathepsin B; thiol protease, cysteine protease, proenzyme, papain; 2.50A {Homo sapiens} SCOP: d.3.1.1 PDB: 2pbh_A 1pbh_A 1mir_A Length = 317 Back     alignment and structure
>3qsd_A Cathepsin B-like peptidase (C01 family); cysteine peptidase, digestive tract, hydrolase-hydrolase INH complex; HET: 074; 1.30A {Schistosoma mansoni} PDB: 3s3q_A* 3s3r_A* Length = 254 Back     alignment and structure
>3cbj_A Cathepsin B; cathepsin B, occluding loop, chagas disease, glyco hydrolase, lysosome, protease, thiol protease, zymogen, CYT vesicle; 1.80A {Homo sapiens} PDB: 3cbk_A 1gmy_A* 3ai8_B* 3k9m_A 1the_A* 1cpj_A* 1cte_A 2dcc_A* 2dc6_A* 1ito_A* 2dc8_A* 2dc9_A* 2dca_A* 2dcb_A* 2dc7_A* 2dcd_A* 1qdq_A* 1csb_B* 1huc_B 2ipp_B ... Length = 266 Back     alignment and structure
>3ois_A Cysteine protease; alpha and beta, hydrolase; HET: UDP; 1.65A {Xylella fastidiosa} Length = 291 Back     alignment and structure
>3f75_P Toxopain-2, cathepsin L propeptide; medical structural genomics of pathogenic protozoa, MSGPP, C protease, parasite, protozoa, hydrolase; 1.99A {Toxoplasma gondii} Length = 106 Back     alignment and structure
>2l95_A Crammer, LP06209P; cysteine proteinase inhibitor, intrinsic disorder P like protein, hydrolase; NMR {Drosophila melanogaster} Length = 80 Back     alignment and structure
>3pw3_A Aminopeptidase C; bleomycin, cysteine proteinase fold, structural genomics, JO center for structural genomics, JCSG; HET: MSE; 2.23A {Parabacteroides distasonis} Length = 383 Back     alignment and structure
>3pw3_A Aminopeptidase C; bleomycin, cysteine proteinase fold, structural genomics, JO center for structural genomics, JCSG; HET: MSE; 2.23A {Parabacteroides distasonis} Length = 383 Back     alignment and structure
>2e01_A Cysteine proteinase 1; bleomycin hydrolase, thiol protease, C1 protease, hydrolase; 1.73A {Saccharomyces cerevisiae} PDB: 2e02_A 2e03_A 2dzy_A 1a6r_A 2e00_A 2dzz_A 3gcb_A 1gcb_A Length = 457 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query346
3tnx_A363 Papain; hydrolase, cytoplasm for recombinant expre 100.0
3qj3_A331 Cathepsin L-like protein; hydrolase, proteinase, l 100.0
1pci_A322 Procaricain; zymogen, hydrolase, thiol protease; 3 100.0
3qt4_A329 Cathepsin-L-like midgut cysteine proteinase; hydro 100.0
2c0y_A315 Procathepsin S; proenzyme, proteinase, hydrolase, 100.0
1by8_A314 Protein (procathepsin K); hydrolase(sulfhydryl pro 100.0
1cs8_A316 Human procathepsin L; prosegment, propeptide, inhi 100.0
2o6x_A310 Procathepsin L1, secreted cathepsin L 1; hydrolase 100.0
1xkg_A312 DER P I, major mite fecal allergen DER P 1; major 100.0
3pdf_A441 Cathepsin C, dipeptidyl peptidase 1; two domains, 100.0
3hhi_A325 Cathepsin B-like cysteine protease; occluding loop 100.0
3p5u_A220 Actinidin; SAD, cysteine proteinases, hydrolase; 1 100.0
1cqd_A221 Protein (protease II); cysteine protease, glycopro 100.0
1ppo_A216 Protease omega; hydrolase(thiol protease); 1.80A { 100.0
1iwd_A215 Ervatamin B; cysteine protease, alpha-beta protein 100.0
1yal_A218 Chymopapain; hydrolase, thiol protease; 1.70A {Car 100.0
1s4v_A229 Cysteine endopeptidase; KDEL ER retention signal, 100.0
3u8e_A222 Papain-like cysteine protease; papain-like cystein 100.0
2cio_A212 Papain; hydrolase/inhibitor, complex hydrolase/inh 100.0
2fo5_A262 Cysteine proteinase EP-B 2; EP-B2, EPB2, EPB, cyst 100.0
3ovx_A218 Cathepsin S; hydrolase, covalent inhibitor, aldehy 100.0
3kwz_A215 Cathepsin K; enzyme inhibitor, covalent reversible 100.0
2bdz_A214 Mexicain; cysteine protease, peptidase_C1, papain- 100.0
3ioq_A213 CMS1MS2; caricaceae, cysteine protease, papain fam 100.0
2xu3_A220 Cathepsin L1; hydrolase, drug design, thiol protea 100.0
3pbh_A317 Procathepsin B; thiol protease, cysteine protease, 100.0
1o0e_A208 Ervatamin C; plant cysteine protease, two domain, 100.0
2b1m_A246 SPE31; papain-like, sugar binding protein; HET: NA 100.0
2oul_A241 Falcipain 2; cysteine protease, inhibitor, macromo 100.0
3f75_A224 Toxopain-2, cathepsin L protease; medical structur 100.0
3bwk_A243 Cysteine protease falcipain-3; malaria, hydrolase; 100.0
8pch_A220 Cathepsin H; hydrolase, protease, cysteine protein 100.0
3i06_A215 Cruzipain; autocatalytic cleavage, glycoprotein, p 100.0
1m6d_A214 Cathepsin F, catsf; papain family cysteine proteas 100.0
3f5v_A222 DER P 1 allergen; allergy, asthma, DUST mites, gly 100.0
3cbj_A266 Cathepsin B; cathepsin B, occluding loop, chagas d 100.0
1deu_A277 Procathepsin X; cysteine protease, proregion, pros 100.0
3qsd_A254 Cathepsin B-like peptidase (C01 family); cysteine 100.0
2wbf_X265 Serine-repeat antigen protein; SERA, malaria, vacu 100.0
3ois_A291 Cysteine protease; alpha and beta, hydrolase; HET: 100.0
2cb5_A453 Protein (bleomycin hydrolase); aminopeptidase, cys 100.0
2e01_A457 Cysteine proteinase 1; bleomycin hydrolase, thiol 100.0
3pw3_A383 Aminopeptidase C; bleomycin, cysteine proteinase f 100.0
3f75_P106 Toxopain-2, cathepsin L propeptide; medical struct 99.77
2l95_A80 Crammer, LP06209P; cysteine proteinase inhibitor, 99.72
1pxv_A183 Cysteine protease; hydrolase; 1.80A {Staphylococcu 96.89
1x9y_A367 Cysteine proteinase; half-barrel, barrel-sandwich- 96.85
1cv8_A174 Staphopain; cysteine protease, thiol protease, pap 96.77
3erv_A236 Putative C39-like peptidase; structural genomics, 87.2
>3tnx_A Papain; hydrolase, cytoplasm for recombinant expression; 2.62A {Carica papaya} Back     alignment and structure
Probab=100.00  E-value=1.7e-86  Score=622.17  Aligned_cols=306  Identities=42%  Similarity=0.806  Sum_probs=268.9

Q ss_pred             cCChhHHHHHHHHHHHHhCCccCChHHHHHHHHHHHHHHHHHHHHcccCCCCCeEEecccCCCCChHHHhcccCCCcCCC
Q 042468           29 TLNDATMNERHEMWMAQYGRVYRDNAEKEMRFKIFKENVEYIASFNNKARNKPYKLGINEFADQTNEEFRAPRNGYKRRL  108 (346)
Q Consensus        29 ~~~~~~~~~~f~~~~~~~~k~Y~~~~e~~~R~~~f~~n~~~I~~~N~~~~~~s~~~g~N~FsD~t~eEf~~~~~~~~~~~  108 (346)
                      -.+++.+.++|++|+++|+|+|.+.+|+.+|++||++|+++|++||+  .+.+|++|+|+|+|||.+||++++++...+.
T Consensus        56 l~s~~~~~~lf~~f~~~~~K~Y~~~~E~~~R~~iF~~Nl~~I~~~N~--~~~sy~~g~N~FaDlT~eEf~~~~~~~~~~~  133 (363)
T 3tnx_A           56 LTSTERLIQLFESWMLKHNKIYKNIDEKIYRFEIFKDNLKYIDETNK--KNNSYWLGLNVFADMSNDEFKEKYTGSIAGN  133 (363)
T ss_dssp             SSCHHHHHHHHHHHHHHTTCCCSSHHHHHHHHHHHHHHHHHHHHHTT--SCCSEEECSCTTTTSCHHHHHHHHSCSSCSC
T ss_pred             hcCHHHHHHHHHHHHHHcCCcCCCHHHHHHHHHHHHHHHHHHHHHHc--CCCCeEEeccccccCCHHHHHHHhccccccc
Confidence            35578899999999999999999999999999999999999999998  5789999999999999999999888765432


Q ss_pred             CcccCCCCcccccccCCCCCCceeeccCCCCCCccCCCCCCccHHHHHHHHHHHHHHHHhcCCCccCChHHHhhhcCCCC
Q 042468          109 PSVRSSETTDVSFRYENASVPASIDWRKKGAVTGVKDQGQCGCCWAFSAVAAMEGINHITTRKLTSLSEQELVDCDTSGE  188 (346)
Q Consensus       109 ~~~~~~~~~~~~~~~~~~~lP~~~Dwr~~~~v~pV~dQg~cgsCwAfA~~~~~e~~~~~~~~~~~~lS~q~l~dc~~~~~  188 (346)
                      ...... ...........+||++||||++|.||||||||.||||||||+++++|+++++++++.+.||+|+|+||...  
T Consensus       134 ~~~~~~-~~~~~~~~~~~~lP~s~DWR~~g~VtpVkdQG~CGSCWAFsa~~alE~~~~i~tg~~~~LSeQ~LvdC~~~--  210 (363)
T 3tnx_A          134 YTTTEL-SYEEVLNDGDVNIPEYVDWRQKGAVTPVKNQGSCGSAWAFSAVSTIESIIKIRTGNLNEYSEQELLDCDRR--  210 (363)
T ss_dssp             CCCSSS-SSSCCCCCSCCCCCSCEEGGGGTCCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCTT--
T ss_pred             cccccc-ccccccCcccCCCCcceecccCCCCCCCccCCcCCchhhhhhcccHHHHHHHHcCCCCCcCHHHHhcccCC--
Confidence            111100 00111111223899999999999999999999999999999999999999999999999999999999875  


Q ss_pred             CCCCCCCChHHHHHHHHHhCCCCCCCCCCCcCCCCCcCCCCCCCCceEeeeeEecCCChHHHHHHHHHcCCeEEEEEccC
Q 042468          189 DQGCEGGLMDDAFEFIISNKGLATEAKYPYKASDGSCNKKEANPSAAKISGYEDVPSNNEAALMKAVANQPVSVAIDASG  268 (346)
Q Consensus       189 ~~gc~GG~~~~a~~~~~~~~G~~~e~~~PY~~~~~~c~~~~~~~~~~~i~~~~~~~~~~~~~i~~~l~~gPv~v~~~~~~  268 (346)
                      +.||+||.+..|+.|+.+. |+++|++|||.+.++.|..........++.++..++..++.+++.+|++|||+|++++..
T Consensus       211 ~~GC~GG~~~~a~~yi~~~-Gi~~e~~yPY~~~~~~c~~~~~~~~~~~~~~~~~~~~~~e~~l~~~v~~gPvsvai~a~~  289 (363)
T 3tnx_A          211 SYGCNGGYPWSALQLVAQY-GIHYRNTYPYEGVQRYCRSREKGPYAAKTDGVRQVQPYNEGALLYSIANQPVSVVLEAAG  289 (363)
T ss_dssp             SCTTBCCCHHHHHHHHHHT-CBCBTTTSCCCSSCCCCCGGGGCSCSBCCCEEEEECSSCHHHHHHHHTTSCEEEEECCCS
T ss_pred             CCCCCCCChHHHHhHHHhc-CccccccCCCcCcCCCcccCCCCCceeeccceEEcchhhHHHHHHHHHcCCcEEEEEecc
Confidence            7899999999999999855 999999999999888777654455567788888888888999999999999999999876


Q ss_pred             ccccccCCCeEeCCCCCCCCeEEEEEEeeccCCCccEEEEEcCCCCCCCCCceEEEEecCCCCCCCcccccccceee
Q 042468          269 SDFQFYSSGVFTGQCGTELDHGVTAVGYGTADDGTKYWLVKNSWGTTWGENGYIRMQRDIDAKEGLCGIAMQASYPT  345 (346)
Q Consensus       269 ~~f~~y~~gi~~~~~~~~~~Hav~iVGyg~~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~~~~~~~Cgi~~~~~~p~  345 (346)
                      ++|++|++|||..+|+...+|||+|||||+     +|||||||||++|||+|||||+|+.++..|+|||++.++||+
T Consensus       290 ~~F~~Y~sGVy~~~~~~~lnHaV~iVGyG~-----~YWIVKNSWGt~WGe~GY~rI~Rg~~~~~~~CGI~~~a~yPi  361 (363)
T 3tnx_A          290 KDFQLYRGGIFVGPCGNKVDHAVAAVGYGP-----NYILIRNSWGTGWGENGYIRIKRGTGNSYGVCGLYTSSFYPV  361 (363)
T ss_dssp             HHHHTEEEEEECCCCCSCCCEEEEEEEEET-----TEEEEECSBCTTSTBTTEEEEECCSCCSSCGGGTTSCEEEEE
T ss_pred             hhhhCCCCCEECCCCCCCCCeEEEEEEcCC-----CcEEEEeCCCCccccCcEEEEEcCCCCCCCcCCccceeeecc
Confidence            789999999999998888999999999985     499999999999999999999999988779999999999997
>3qj3_A Cathepsin L-like protein; hydrolase, proteinase, larVal midgut; 1.85A {Tenebrio molitor} SCOP: d.3.1.0 Back     alignment and structure
>1pci_A Procaricain; zymogen, hydrolase, thiol protease; 3.20A {Carica papaya} SCOP: d.3.1.1 Back     alignment and structure
>3qt4_A Cathepsin-L-like midgut cysteine proteinase; hydrolase, zymogen, intramolecular DISS bonds, insect larVal midgut; HET: PG4 PG6; 2.11A {Tenebrio molitor} Back     alignment and structure
>2c0y_A Procathepsin S; proenzyme, proteinase, hydrolase, thiol protease, prosegment binding loop, glycoprotein, lysosome, protease, zymogen; 2.1A {Homo sapiens} Back     alignment and structure
>1by8_A Protein (procathepsin K); hydrolase(sulfhydryl proteinase), papain; 2.60A {Homo sapiens} SCOP: d.3.1.1 PDB: 7pck_A Back     alignment and structure
>1cs8_A Human procathepsin L; prosegment, propeptide, inhibition, hydrolase; HET: OCS; 1.80A {Homo sapiens} SCOP: d.3.1.1 PDB: 1cjl_A 3hwn_A* Back     alignment and structure
>2o6x_A Procathepsin L1, secreted cathepsin L 1; hydrolase, thiol protease, cysteine protease, zymogen, hydro; 1.40A {Fasciola hepatica} Back     alignment and structure
>1xkg_A DER P I, major mite fecal allergen DER P 1; major allergen, cysteine protease, house DUST mite, dermatop pteronyssinus; 1.61A {Dermatophagoides pteronyssinus} SCOP: d.3.1.1 Back     alignment and structure
>3pdf_A Cathepsin C, dipeptidyl peptidase 1; two domains, cystein protease, hydrolase-hydrolase inhibitor; HET: LXV NAG; 1.85A {Homo sapiens} PDB: 1jqp_A* 2djf_B* 1k3b_B* 2djg_B* 2djf_A* 1k3b_A* 2djg_A* 2djf_C* 1k3b_C* 2djg_C* Back     alignment and structure
>3hhi_A Cathepsin B-like cysteine protease; occluding loop, hydrolase, THIO protease; HET: 074; 1.60A {Trypanosoma brucei} SCOP: d.3.1.0 PDB: 4hwy_A* 3mor_A* Back     alignment and structure
>1cqd_A Protein (protease II); cysteine protease, glycoprotein, proline specificity, carboh papain family, hydrolase; HET: NAG FUL FUC; 2.10A {Zingiber officinale} SCOP: d.3.1.1 Back     alignment and structure
>1ppo_A Protease omega; hydrolase(thiol protease); 1.80A {Carica papaya} SCOP: d.3.1.1 PDB: 1meg_A* Back     alignment and structure
>1iwd_A Ervatamin B; cysteine protease, alpha-beta protein, catalytic DYAD, L-DOM domain., hydrolase; 1.63A {Tabernaemontana divaricata} SCOP: d.3.1.1 Back     alignment and structure
>1yal_A Chymopapain; hydrolase, thiol protease; 1.70A {Carica papaya} SCOP: d.3.1.1 PDB: 1gec_E* Back     alignment and structure
>1s4v_A Cysteine endopeptidase; KDEL ER retention signal, endosperm, ricinosomes, SEED germi senescence, hydrolase-hydrolase inhibitor complex; 2.00A {Ricinus communis} SCOP: d.3.1.1 Back     alignment and structure
>3u8e_A Papain-like cysteine protease; papain-like cysteine peptidase, peptidase_C1A, hydrolase, in form; 1.31A {Crocus sativus} SCOP: d.3.1.0 Back     alignment and structure
>2cio_A Papain; hydrolase/inhibitor, complex hydrolase/inhibitor, ICP, cysteine protease, allergen, protease, thiol protease; 1.5A {Carica papaya} PDB: 1khq_A 1khp_A 1ppn_A 3e1z_B 3ima_A 3lfy_A 9pap_A 1bqi_A* 1bp4_A* 1pad_A 1pe6_A* 1pip_A* 1pop_A* 1ppd_A 1ppp_A* 1stf_E* 2pad_A 4pad_A* 5pad_A* 6pad_A* ... Back     alignment and structure
>2fo5_A Cysteine proteinase EP-B 2; EP-B2, EPB2, EPB, cysteine endoprotease, endopeptidase, LEUP hydrolase; HET: AR7; 2.20A {Hordeum vulgare} Back     alignment and structure
>3ovx_A Cathepsin S; hydrolase, covalent inhibitor, aldehyde warhead is covalently bound to Cys25, lysosomeal protein; HET: O64; 1.49A {Homo sapiens} SCOP: d.3.1.1 PDB: 2h7j_A* 2f1g_A* 2hh5_B* 2hhn_A* 2hxz_A* 2op3_A* 2frq_A* 2fra_A* 2fq9_A* 2ft2_A* 2fud_A* 2g7y_A* 1ms6_A* 2r9m_A* 2r9n_A* 2r9o_A* 3n3g_A* 3n4c_A* 3mpe_A* 1nqc_A* ... Back     alignment and structure
>3kwz_A Cathepsin K; enzyme inhibitor, covalent reversible inhibitor, disease mutation, disulfide bond, glycoprotein, hydrolase, lysosome, protease; HET: KWZ; 1.49A {Homo sapiens} PDB: 1au0_A* 1au2_A* 1au3_A* 1au4_A* 1ayu_A* 1ayv_A* 1ayw_A* 1bgo_A* 1atk_A* 1nl6_A* 1nlj_A* 1q6k_A* 1mem_A* 1yk7_A* 1yk8_A* 1yt7_A* 2ato_A* 2aux_A* 2auz_A* 2bdl_A* ... Back     alignment and structure
>2bdz_A Mexicain; cysteine protease, peptidase_C1, papain-like, HYDR; HET: E64; 2.10A {Jacaratia mexicana} Back     alignment and structure
>3ioq_A CMS1MS2; caricaceae, cysteine protease, papain family, hydrolase; HET: E64 SO4; 1.87A {Carica candamarcensis} SCOP: d.3.1.1 Back     alignment and structure
>2xu3_A Cathepsin L1; hydrolase, drug design, thiol protease; HET: XU3 BTB; 0.90A {Homo sapiens} PDB: 2xu4_A* 2xu5_A* 2yj2_A* 2yj8_A* 2yj9_A* 2yjb_A* 2yjc_A* 3bc3_A* 3h89_A* 3h8b_A* 3h8c_A* 3of9_A* 3of8_A* 3hha_A* 2xu1_A* 3iv2_A* 3k24_A* 2nqd_B* 3kse_A* 2vhs_A ... Back     alignment and structure
>3pbh_A Procathepsin B; thiol protease, cysteine protease, proenzyme, papain; 2.50A {Homo sapiens} SCOP: d.3.1.1 PDB: 2pbh_A 1pbh_A 1mir_A Back     alignment and structure
>1o0e_A Ervatamin C; plant cysteine protease, two domain, stable at PH 2-12, HYDR; 1.90A {Tabernaemontana divaricata} SCOP: d.3.1.1 PDB: 2pns_A* 2pre_A* 3bcn_A* Back     alignment and structure
>2b1m_A SPE31; papain-like, sugar binding protein; HET: NAG FUC PG4; 2.00A {Pachyrhizus erosus} PDB: 2b1n_A* Back     alignment and structure
>2oul_A Falcipain 2; cysteine protease, inhibitor, macromolecular interaction, HY hydrolase inhibitor complex; 2.20A {Plasmodium falciparum} SCOP: d.3.1.1 PDB: 2ghu_A 1yvb_A 3bpf_A* 3pnr_A Back     alignment and structure
>3f75_A Toxopain-2, cathepsin L protease; medical structural genomics of pathogenic protozoa, MSGPP, C protease, parasite, protozoa, hydrolase; 1.99A {Toxoplasma gondii} SCOP: d.3.1.0 Back     alignment and structure
>3bwk_A Cysteine protease falcipain-3; malaria, hydrolase; HET: C1P; 2.42A {Plasmodium falciparum} PDB: 3bpm_A* Back     alignment and structure
>8pch_A Cathepsin H; hydrolase, protease, cysteine proteinase, aminopeptidase; HET: NAG BMA; 2.10A {Sus scrofa} SCOP: d.3.1.1 PDB: 1nb3_A* 1nb5_A* Back     alignment and structure
>3i06_A Cruzipain; autocatalytic cleavage, glycoprotein, protease, thiol protease, zymogen; HET: QL2; 1.10A {Trypanosoma cruzi} SCOP: d.3.1.1 PDB: 1ewm_A* 1ewo_A* 1ewl_A* 1f29_A* 1ewp_A* 1f2b_A* 1f2c_A* 1f2a_A* 1me4_A* 1u9q_X* 2aim_A* 2efm_A* 2oz2_A* 1me3_A* 3kku_A* 3lxs_A* 1aim_A* 3iut_A* 3hd3_A* 2p86_A* ... Back     alignment and structure
>1m6d_A Cathepsin F, catsf; papain family cysteine protease, hydrolase; HET: MYP; 1.70A {Homo sapiens} SCOP: d.3.1.1 Back     alignment and structure
>3cbj_A Cathepsin B; cathepsin B, occluding loop, chagas disease, glyco hydrolase, lysosome, protease, thiol protease, zymogen, CYT vesicle; 1.80A {Homo sapiens} PDB: 3cbk_A 1gmy_A* 3ai8_B* 3k9m_A 1the_A* 1cpj_A* 1cte_A 2dcc_A* 2dc6_A* 1ito_A* 2dc8_A* 2dc9_A* 2dca_A* 2dcb_A* 2dc7_A* 2dcd_A* 1qdq_A* 1csb_B* 1huc_B 2ipp_B ... Back     alignment and structure
>1deu_A Procathepsin X; cysteine protease, proregion, prosegment, HY; 1.70A {Homo sapiens} SCOP: d.3.1.1 PDB: 1ef7_A Back     alignment and structure
>3qsd_A Cathepsin B-like peptidase (C01 family); cysteine peptidase, digestive tract, hydrolase-hydrolase INH complex; HET: 074; 1.30A {Schistosoma mansoni} SCOP: d.3.1.0 PDB: 3s3q_A* 3s3r_A* Back     alignment and structure
>2wbf_X Serine-repeat antigen protein; SERA, malaria, vacuole, protease, cathepsin, hydrolase, glycoprotein, thiol protease; HET: DMS; 1.60A {Plasmodium falciparum} PDB: 3ch3_X 3ch2_X Back     alignment and structure
>3ois_A Cysteine protease; alpha and beta, hydrolase; HET: UDP; 1.65A {Xylella fastidiosa} Back     alignment and structure
>2cb5_A Protein (bleomycin hydrolase); aminopeptidase, cysteine protease, SELF- compartmentalizing, cylinase; 1.85A {Homo sapiens} SCOP: d.3.1.1 PDB: 1cb5_A Back     alignment and structure
>2e01_A Cysteine proteinase 1; bleomycin hydrolase, thiol protease, C1 protease, hydrolase; 1.73A {Saccharomyces cerevisiae} PDB: 2e02_A 2e03_A 2dzy_A 1a6r_A 2e00_A 2dzz_A 3gcb_A 1gcb_A Back     alignment and structure
>3pw3_A Aminopeptidase C; bleomycin, cysteine proteinase fold, structural genomics, JO center for structural genomics, JCSG; HET: MSE; 2.23A {Parabacteroides distasonis} Back     alignment and structure
>3f75_P Toxopain-2, cathepsin L propeptide; medical structural genomics of pathogenic protozoa, MSGPP, C protease, parasite, protozoa, hydrolase; 1.99A {Toxoplasma gondii} Back     alignment and structure
>2l95_A Crammer, LP06209P; cysteine proteinase inhibitor, intrinsic disorder P like protein, hydrolase; NMR {Drosophila melanogaster} Back     alignment and structure
>1pxv_A Cysteine protease; hydrolase; 1.80A {Staphylococcus aureus} SCOP: d.3.1.1 PDB: 1y4h_A Back     alignment and structure
>1x9y_A Cysteine proteinase; half-barrel, barrel-sandwich-hybrid, hydrolase; 2.50A {Staphylococcus aureus} SCOP: d.3.1.1 d.17.1.4 Back     alignment and structure
>1cv8_A Staphopain; cysteine protease, thiol protease, papain family; HET: E64; 1.75A {Staphylococcus aureus} SCOP: d.3.1.1 Back     alignment and structure
>3erv_A Putative C39-like peptidase; structural genomics, unknown function, PSI-2, protein structure initiative; 2.10A {Bacillus anthracis} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 346
d1cs8a_316 d.3.1.1 (A:) (Pro)cathepsin L {Human (Homo sapiens 2e-81
d1s4va_224 d.3.1.1 (A:) Vignain (bean endopeptidase) {Castor 3e-75
d1yala_218 d.3.1.1 (A:) Chymopapain {Papaya (Carica papaya) [ 3e-73
d1cqda_216 d.3.1.1 (A:) Proline-specific cysteine protease {G 7e-70
d1aeca_218 d.3.1.1 (A:) Actinidin {Chinese gooseberry or kiwi 2e-69
d1ppoa_216 d.3.1.1 (A:) Caricain (protease omega) {Papaya (Ca 1e-68
d2oula1241 d.3.1.1 (A:-16-224) Falcipain 2 {Plasmodium falcip 6e-68
d1o0ea_208 d.3.1.1 (A:) Ervatamin C {East indian rosebay (Erv 1e-66
d1iwda_215 d.3.1.1 (A:) Ervatamin B {Adam's apple (Ervatamia 3e-66
d1fh0a_221 d.3.1.1 (A:) (Pro)cathepsin V {Human (Homo sapiens 5e-66
g8pch.1228 d.3.1.1 (P:,A:) Cathepsin H {Pig (Sus scrofa) [Tax 6e-65
d2h7ja1217 d.3.1.1 (A:1-217) (Pro)cathepsin S {Human (Homo sa 8e-65
d1xkga1302 d.3.1.1 (A:4-305) Major mite fecal allergen der p 2e-64
d1khqa_212 d.3.1.1 (A:) Papain {Papaya (Carica papaya) [TaxId 1e-63
d1m6da_214 d.3.1.1 (A:) Cathepsin F {Human (Homo sapiens) [Ta 4e-62
d2r6na1215 d.3.1.1 (A:1-215) (Pro)cathepsin K {Human (Homo sa 8e-61
d1gmya_254 d.3.1.1 (A:) (Pro)cathepsin B {Human (Homo sapiens 6e-58
d1me4a_215 d.3.1.1 (A:) Cruzain {Trypanosoma cruzi [TaxId: 56 4e-55
d1deua_275 d.3.1.1 (A:) (Pro)cathepsin X {Human (Homo sapiens 8e-52
g1k3b.1233 d.3.1.1 (B:,C:) Cathepsin C (dipeptidyl peptidase 1e-49
d3gcba_458 d.3.1.1 (A:) Bleomycin hydrolase {Baker's yeast (S 2e-08
d2cb5a_453 d.3.1.1 (A:) Bleomycin hydrolase {Human (Homo sapi 4e-07
>d1cs8a_ d.3.1.1 (A:) (Pro)cathepsin L {Human (Homo sapiens) [TaxId: 9606]} Length = 316 Back     information, alignment and structure

class: Alpha and beta proteins (a+b)
fold: Cysteine proteinases
superfamily: Cysteine proteinases
family: Papain-like
domain: (Pro)cathepsin L
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  248 bits (634), Expect = 2e-81
 Identities = 134/322 (41%), Positives = 176/322 (54%), Gaps = 19/322 (5%)

Query: 32  DATMNERHEMWMAQYGRVYRDNAEKEMRFKIFKENVEYIASFNNKAR--NKPYKLGINEF 89
           D ++  +   W A + R+Y    E+  R  ++++N++ I   N + R     + + +N F
Sbjct: 5   DHSLEAQWTKWKAMHNRLY-GMNEEGWRRAVWEKNMKMIELHNQEYREGKHSFTMAMNAF 63

Query: 90  ADQTNEEFRAPRNGYKRRLPSVRSSETTDVSFRYENASVPASIDWRKKGAVTGVKDQGQC 149
            D T+EEFR   NG++ R           V         P S+DWR+KG VT VK+QGQC
Sbjct: 64  GDMTSEEFRQVMNGFQNR-----KPRKGKVFQEPLFYEAPRSVDWREKGYVTPVKNQGQC 118

Query: 150 GCCWAFSAVAAMEGINHITTRKLTSLSEQELVDCDTSGEDQGCEGGLMDDAFEFIISNKG 209
           G CWAFSA  A+EG     T +L SLSEQ LVDC     ++GC GGLMD AF+++  N G
Sbjct: 119 GSCWAFSATGALEGQMFRKTGRLISLSEQNLVDCSGPQGNEGCNGGLMDYAFQYVQDNGG 178

Query: 210 LATEAKYPYKASDGSCNKKEANPSAAKISGYEDVPSNNEAALMKAVANQ-PVSVAIDASG 268
           L +E  YPY+A++ SC        A             E ALMKAVA   P+SVAIDA  
Sbjct: 179 LDSEESYPYEATEESCKYNPKYSVA--NDAGFVDIPKQEKALMKAVATVGPISVAIDAGH 236

Query: 269 SDFQFYSSGVFTGQ-CGTE-LDHGVTAVGYGT---ADDGTKYWLVKNSWGTTWGENGYIR 323
             F FY  G++    C +E +DHGV  VGYG      D  KYWLVKNSWG  WG  GY++
Sbjct: 237 ESFLFYKEGIYFEPDCSSEDMDHGVLVVGYGFESTESDNNKYWLVKNSWGEEWGMGGYVK 296

Query: 324 MQRDIDAKEGLCGIAMQASYPT 345
           M +D   +   CGIA  ASYPT
Sbjct: 297 MAKD---RRNHCGIASAASYPT 315
>d1s4va_ d.3.1.1 (A:) Vignain (bean endopeptidase) {Castor bean (Ricinus communis) [TaxId: 3988]} Length = 224 Back     information, alignment and structure
>d1yala_ d.3.1.1 (A:) Chymopapain {Papaya (Carica papaya) [TaxId: 3649]} Length = 218 Back     information, alignment and structure
>d1cqda_ d.3.1.1 (A:) Proline-specific cysteine protease {Ginger rhizome (Zingiber officinale) [TaxId: 94328]} Length = 216 Back     information, alignment and structure
>d1aeca_ d.3.1.1 (A:) Actinidin {Chinese gooseberry or kiwifruit (Actinidia chinensis) [TaxId: 3625]} Length = 218 Back     information, alignment and structure
>d1ppoa_ d.3.1.1 (A:) Caricain (protease omega) {Papaya (Carica papaya) [TaxId: 3649]} Length = 216 Back     information, alignment and structure
>d2oula1 d.3.1.1 (A:-16-224) Falcipain 2 {Plasmodium falciparum [TaxId: 5833]} Length = 241 Back     information, alignment and structure
>d1o0ea_ d.3.1.1 (A:) Ervatamin C {East indian rosebay (Ervatamia coronaria) [TaxId: 52861]} Length = 208 Back     information, alignment and structure
>d1iwda_ d.3.1.1 (A:) Ervatamin B {Adam's apple (Ervatamia coronaria) [TaxId: 52861]} Length = 215 Back     information, alignment and structure
>d1fh0a_ d.3.1.1 (A:) (Pro)cathepsin V {Human (Homo sapiens) [TaxId: 9606]} Length = 221 Back     information, alignment and structure
>d2h7ja1 d.3.1.1 (A:1-217) (Pro)cathepsin S {Human (Homo sapiens) [TaxId: 9606]} Length = 217 Back     information, alignment and structure
>d1xkga1 d.3.1.1 (A:4-305) Major mite fecal allergen der p 1 {House-dust mite (Dermatophagoides pteronyssinus) [TaxId: 6956]} Length = 302 Back     information, alignment and structure
>d1khqa_ d.3.1.1 (A:) Papain {Papaya (Carica papaya) [TaxId: 3649]} Length = 212 Back     information, alignment and structure
>d1m6da_ d.3.1.1 (A:) Cathepsin F {Human (Homo sapiens) [TaxId: 9606]} Length = 214 Back     information, alignment and structure
>d2r6na1 d.3.1.1 (A:1-215) (Pro)cathepsin K {Human (Homo sapiens) [TaxId: 9606]} Length = 215 Back     information, alignment and structure
>d1gmya_ d.3.1.1 (A:) (Pro)cathepsin B {Human (Homo sapiens) [TaxId: 9606]} Length = 254 Back     information, alignment and structure
>d1me4a_ d.3.1.1 (A:) Cruzain {Trypanosoma cruzi [TaxId: 5693]} Length = 215 Back     information, alignment and structure
>d1deua_ d.3.1.1 (A:) (Pro)cathepsin X {Human (Homo sapiens) [TaxId: 9606]} Length = 275 Back     information, alignment and structure
>d3gcba_ d.3.1.1 (A:) Bleomycin hydrolase {Baker's yeast (Saccharomyces cerevisiae), Gal6 [TaxId: 4932]} Length = 458 Back     information, alignment and structure
>d2cb5a_ d.3.1.1 (A:) Bleomycin hydrolase {Human (Homo sapiens) [TaxId: 9606]} Length = 453 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query346
d1cs8a_316 (Pro)cathepsin L {Human (Homo sapiens) [TaxId: 960 100.0
d1xkga1302 Major mite fecal allergen der p 1 {House-dust mite 100.0
d1ppoa_216 Caricain (protease omega) {Papaya (Carica papaya) 100.0
d1yala_218 Chymopapain {Papaya (Carica papaya) [TaxId: 3649]} 100.0
d2oula1241 Falcipain 2 {Plasmodium falciparum [TaxId: 5833]} 100.0
d1cqda_216 Proline-specific cysteine protease {Ginger rhizome 100.0
d1s4va_224 Vignain (bean endopeptidase) {Castor bean (Ricinus 100.0
d1khqa_212 Papain {Papaya (Carica papaya) [TaxId: 3649]} 100.0
d2h7ja1217 (Pro)cathepsin S {Human (Homo sapiens) [TaxId: 960 100.0
d2r6na1215 (Pro)cathepsin K {Human (Homo sapiens) [TaxId: 960 100.0
d1fh0a_221 (Pro)cathepsin V {Human (Homo sapiens) [TaxId: 960 100.0
d1iwda_215 Ervatamin B {Adam's apple (Ervatamia coronaria) [T 100.0
d1aeca_218 Actinidin {Chinese gooseberry or kiwifruit (Actini 100.0
g8pch.1228 Cathepsin H {Pig (Sus scrofa) [TaxId: 9823]} 100.0
d1o0ea_208 Ervatamin C {East indian rosebay (Ervatamia corona 100.0
d1m6da_214 Cathepsin F {Human (Homo sapiens) [TaxId: 9606]} 100.0
d1me4a_215 Cruzain {Trypanosoma cruzi [TaxId: 5693]} 100.0
g1k3b.1233 Cathepsin C (dipeptidyl peptidase I), catalytic do 100.0
d1deua_275 (Pro)cathepsin X {Human (Homo sapiens) [TaxId: 960 100.0
d1gmya_254 (Pro)cathepsin B {Human (Homo sapiens) [TaxId: 960 100.0
d3gcba_ 458 Bleomycin hydrolase {Baker's yeast (Saccharomyces 99.78
d2cb5a_ 453 Bleomycin hydrolase {Human (Homo sapiens) [TaxId: 99.69
d1cv8a_173 Staphopain StpA {Staphylococcus aureus [TaxId: 128 95.68
d1pxva_183 Staphopain SspB {Staphylococcus aureus [TaxId: 128 95.43
>d1cs8a_ d.3.1.1 (A:) (Pro)cathepsin L {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
class: Alpha and beta proteins (a+b)
fold: Cysteine proteinases
superfamily: Cysteine proteinases
family: Papain-like
domain: (Pro)cathepsin L
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.1e-79  Score=571.22  Aligned_cols=304  Identities=45%  Similarity=0.829  Sum_probs=258.2

Q ss_pred             hhHHHHHHHHHHHHhCCccCChHHHHHHHHHHHHHHHHHHHHcccC--CCCCeEEecccCCCCChHHHhcccCCCcCCCC
Q 042468           32 DATMNERHEMWMAQYGRVYRDNAEKEMRFKIFKENVEYIASFNNKA--RNKPYKLGINEFADQTNEEFRAPRNGYKRRLP  109 (346)
Q Consensus        32 ~~~~~~~f~~~~~~~~k~Y~~~~e~~~R~~~f~~n~~~I~~~N~~~--~~~s~~~g~N~FsD~t~eEf~~~~~~~~~~~~  109 (346)
                      ++.++.+|++||++|+|+|++. |+..|++||.+|+++|++||++.  ++.+|++|+|+|+|||.+||.+++++...+..
T Consensus         5 ~~~l~~~F~~f~~~~~K~Y~~~-ee~~R~~iF~~N~~~I~~~N~~~~~~~~~~~~g~N~fsDlt~eEf~~~~~~~~~~~~   83 (316)
T d1cs8a_           5 DHSLEAQWTKWKAMHNRLYGMN-EEGWRRAVWEKNMKMIELHNQEYREGKHSFTMAMNAFGDMTSEEFRQVMNGFQNRKP   83 (316)
T ss_dssp             CGGGHHHHHHHHHHTTCCCCTT-HHHHHHHHHHHHHHHHHHHHHHHHTTCCSEEECCCTTTTCCHHHHHHHHCCBCCCCC
T ss_pred             cHHHHHHHHHHHHHhCCcCCCH-HHHHHHHHHHHHHHHHHHHHhHhhcCCCceEEeceeccccCcHHHHhhhcccccccc
Confidence            4678889999999999999875 77899999999999999999842  56799999999999999999998876554321


Q ss_pred             cccCCCCcccccccCCCCCCceeeccCCCCCCccCCCCCCccHHHHHHHHHHHHHHHHhcCCCccCChHHHhhhcCCCCC
Q 042468          110 SVRSSETTDVSFRYENASVPASIDWRKKGAVTGVKDQGQCGCCWAFSAVAAMEGINHITTRKLTSLSEQELVDCDTSGED  189 (346)
Q Consensus       110 ~~~~~~~~~~~~~~~~~~lP~~~Dwr~~~~v~pV~dQg~cgsCwAfA~~~~~e~~~~~~~~~~~~lS~q~l~dc~~~~~~  189 (346)
                      ..    . .........+||++||||++|+|+||||||.||||||||+++++|++++++++..+.||+|+|+||+....+
T Consensus        84 ~~----~-~~~~~~~~~~lP~s~Dwr~~g~vtpVkdQG~CGsCwAfa~~~~~E~~~~i~~~~~~~lS~Q~lvdC~~~~~~  158 (316)
T d1cs8a_          84 RK----G-KVFQEPLFYEAPRSVDWREKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGRLISLSEQNLVDCSGPQGN  158 (316)
T ss_dssp             SC----C-EECCCCTTCCCCSCEEGGGGTCCCCCCBCCSSSCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCGGGTC
T ss_pred             cc----C-ccccCcccccCCCceECCcCCcccccccCCCCceeeehhhhHHHHHHHHhhcCCcccchhhhhhhccccccC
Confidence            11    0 111111223899999999999999999999999999999999999999999999999999999999876668


Q ss_pred             CCCCCCChHHHHHHHHHhCCCCCCCCCCCcCCCCCcCCCCCCCCceEeeeeEecCCChHHHHHHHHH-cCCeEEEEEccC
Q 042468          190 QGCEGGLMDDAFEFIISNKGLATEAKYPYKASDGSCNKKEANPSAAKISGYEDVPSNNEAALMKAVA-NQPVSVAIDASG  268 (346)
Q Consensus       190 ~gc~GG~~~~a~~~~~~~~G~~~e~~~PY~~~~~~c~~~~~~~~~~~i~~~~~~~~~~~~~i~~~l~-~gPv~v~~~~~~  268 (346)
                      .+|.||.+..|+.|+..+++++.|..+||......|... .......+..+.... .+.+.|+++|. .|||++++++..
T Consensus       159 ~~c~gg~~~~a~~y~~~~g~~~~e~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-~~~~~l~~~l~~~gpv~v~i~~~~  236 (316)
T d1cs8a_         159 EGCNGGLMDYAFQYVQDNGGLDSEESYPYEATEESCKYN-PKYSVANDAGFVDIP-KQEKALMKAVATVGPISVAIDAGH  236 (316)
T ss_dssp             CGGGCBCHHHHHHHHHHHTCEEBTTTSCCCSSCCCCCCC-GGGEEECCCCEEECC-SCHHHHHHHHHHHCCEEEEECCCS
T ss_pred             CCCCCCchHHHHHHHHhcCcccccccccccccccccccc-ccccccccccccccc-CcHHHHHHHHHHhCCeEEEEEecc
Confidence            899999999999999988678899999999888877765 233344555666555 57778888887 799999999986


Q ss_pred             ccccccCCCeEeCC-CC-CCCCeEEEEEEeecc---CCCccEEEEEcCCCCCCCCCceEEEEecCCCCCCCcccccccce
Q 042468          269 SDFQFYSSGVFTGQ-CG-TELDHGVTAVGYGTA---DDGTKYWLVKNSWGTTWGENGYIRMQRDIDAKEGLCGIAMQASY  343 (346)
Q Consensus       269 ~~f~~y~~gi~~~~-~~-~~~~Hav~iVGyg~~---~~g~~ywivkNSWG~~WG~~Gy~~i~~~~~~~~~~Cgi~~~~~~  343 (346)
                      ..|.+|++|||..+ |+ ..++|||+|||||.+   .++.+|||||||||++|||+|||||+|+..   |.|||++.++|
T Consensus       237 ~~f~~y~~Gi~~~~~c~~~~~nHaV~iVGyG~d~~~~~g~~YWIikNSWG~~WGe~GY~ri~r~~~---n~CGI~~~~~y  313 (316)
T d1cs8a_         237 ESFLFYKEGIYFEPDCSSEDMDHGVLVVGYGFESTESDNNKYWLVKNSWGEEWGMGGYVKMAKDRR---NHCGIASAASY  313 (316)
T ss_dssp             HHHHTEEEEEECCTTCCSSCCCEEEEEEEEEEECCSSCCEEEEEEECSBCTTSTBTTEEEEECSSS---SGGGTTTSCEE
T ss_pred             chhccccCCcccCCCCCCCcCCEEEEEEEEcccccCCCCCeEEEEEeCCCCCcccCCEEEEeeCCC---CcCccCCeeee
Confidence            78999999999887 66 468999999999965   368899999999999999999999999864   46999999999


Q ss_pred             eeC
Q 042468          344 PTA  346 (346)
Q Consensus       344 p~~  346 (346)
                      |+|
T Consensus       314 P~v  316 (316)
T d1cs8a_         314 PTV  316 (316)
T ss_dssp             ECC
T ss_pred             eeC
Confidence            986
>d1xkga1 d.3.1.1 (A:4-305) Major mite fecal allergen der p 1 {House-dust mite (Dermatophagoides pteronyssinus) [TaxId: 6956]} Back     information, alignment and structure
>d1ppoa_ d.3.1.1 (A:) Caricain (protease omega) {Papaya (Carica papaya) [TaxId: 3649]} Back     information, alignment and structure
>d1yala_ d.3.1.1 (A:) Chymopapain {Papaya (Carica papaya) [TaxId: 3649]} Back     information, alignment and structure
>d1cqda_ d.3.1.1 (A:) Proline-specific cysteine protease {Ginger rhizome (Zingiber officinale) [TaxId: 94328]} Back     information, alignment and structure
>d1s4va_ d.3.1.1 (A:) Vignain (bean endopeptidase) {Castor bean (Ricinus communis) [TaxId: 3988]} Back     information, alignment and structure
>d1khqa_ d.3.1.1 (A:) Papain {Papaya (Carica papaya) [TaxId: 3649]} Back     information, alignment and structure
>d2h7ja1 d.3.1.1 (A:1-217) (Pro)cathepsin S {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2r6na1 d.3.1.1 (A:1-215) (Pro)cathepsin K {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1fh0a_ d.3.1.1 (A:) (Pro)cathepsin V {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1iwda_ d.3.1.1 (A:) Ervatamin B {Adam's apple (Ervatamia coronaria) [TaxId: 52861]} Back     information, alignment and structure
>d1aeca_ d.3.1.1 (A:) Actinidin {Chinese gooseberry or kiwifruit (Actinidia chinensis) [TaxId: 3625]} Back     information, alignment and structure
>d1o0ea_ d.3.1.1 (A:) Ervatamin C {East indian rosebay (Ervatamia coronaria) [TaxId: 52861]} Back     information, alignment and structure
>d1m6da_ d.3.1.1 (A:) Cathepsin F {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1me4a_ d.3.1.1 (A:) Cruzain {Trypanosoma cruzi [TaxId: 5693]} Back     information, alignment and structure
>d1deua_ d.3.1.1 (A:) (Pro)cathepsin X {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1gmya_ d.3.1.1 (A:) (Pro)cathepsin B {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d3gcba_ d.3.1.1 (A:) Bleomycin hydrolase {Baker's yeast (Saccharomyces cerevisiae), Gal6 [TaxId: 4932]} Back     information, alignment and structure
>d2cb5a_ d.3.1.1 (A:) Bleomycin hydrolase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1cv8a_ d.3.1.1 (A:) Staphopain StpA {Staphylococcus aureus [TaxId: 1280]} Back     information, alignment and structure
>d1pxva_ d.3.1.1 (A:) Staphopain SspB {Staphylococcus aureus [TaxId: 1280]} Back     information, alignment and structure