Citrus Sinensis ID: 042504

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280------
MNSNKDSSVVLPQPSMEQTQKNGSIVFDYHKLQKQANLPTEFIWPNLELAQEELREPLIDLHGFLSGDERATAEAIDLVRGACVNHGFFQVINHGVDASLLKAAIEETDSIFKLPLERKLSIPIKTGLAKGYAGAHAGRFTTNLPWKETFTFNYHEKDAEPLFVDYFKSVFGQDFERKRWIYQKYCQAMWKLSGVLFELLAMSLGVDRKHYKKFFEDGYSIVRFNFYPPCKNSALTLGTGPHYDPNSLTILHQEQVEGLEVFSNNKWQTIRPRSDALVINIGDTFV
cccccccccccccccHHHHHHcccccccHHHHHccccccccccccccccccccccccEEEccccccccHHHHHHHHHHHHHHHHHccEEEEEcccccHHHHHHHHHHHHHHccccHHHHHcccccccccEEEEcccccccccccccccEEEEEEEccccccHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHccccEEEEEccccccccccccccccccccccccEEEEccccccEEEEEccEEEEcccccccEEEEcccccc
cccccccccccccccHHHcccccccEEcHHHHcccccccHHccccccccccccccccEEEccccccccHHHHHHHHHHHHHHHHHcccEEEEcccccHHHHHHHHHHHHHHHcccHHHHHHHHcccccccEEEEEEcccccccccHHHEEEEcccccHccHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHcccccEEEEEccccccccccEccccccccccEEEEEEccccccEEEEEcccEEEEcccccEEEEEcccccc
mnsnkdssvvlpqpsmeqtqkngsiVFDYHklqkqanlptefiwpnLELAQEELREPLidlhgflsgderATAEAIDLVRGACVNHGFFQVINHGVDASLLKAAIEETDSIFklplerklsipiktglakgyagahagrfttnlpwketftfnyhekdaeplfVDYFKSVFGQDFERKRWIYQKYCQAMWKLSGVLFELLAMSLGvdrkhykkffedgysivrfnfyppcknsaltlgtgphydpnsltiLHQEQVeglevfsnnkwqtirprsdalvinigdtfv
mnsnkdssvvlpqpsmeqtQKNGSIVFDYHKLQKQANLPTEFIWPNLELAQEELREPLIDLHGFLSGDERATAEAIDLVRGACVNHGFFQVINHGVDASLLKAAIEETDSIFKLPLERKLSIPIKTGLAKGYAGAHAGRFTTNLPWKETFTFNYHEKDAEPLFVDYFKSVFGQDFERKRWIYQKYCQAMWKLSGVLFELLAMSLGVDRKHYKKFFEDGYSIVRFNFYPPCKNSALTLGTGPHYDPNSLTILHQEQVEGLEvfsnnkwqtirprsdalvinigdtfv
MNSNKDSSVVLPQPSMEQTQKNGSIVFDYHKLQKQANLPTEFIWPNLELAQEELREPLIDLHGFLSGDERATAEAIDLVRGACVNHGFFQVINHGVDASLLKAAIEETDSIFKLPLERKLSIPIKTGLAKGYAGAHAGRFTTNLPWKETFTFNYHEKDAEPLFVDYFKSVFGQDFERKRWIYQKYCQAMWKLSGVLFELLAMSLGVDRKHYKKFFEDGYSIVRFNFYPPCKNSALTLGTGPHYDPNSLTILHQEQVEGLEVFSNNKWQTIRPRSDALVINIGDTFV
************************IVFDYHKLQKQANLPTEFIWPNLELAQEELREPLIDLHGFLSGDERATAEAIDLVRGACVNHGFFQVINHGVDASLLKAAIEETDSIFKLPLERKLSIPIKTGLAKGYAGAHAGRFTTNLPWKETFTFNYHEKDAEPLFVDYFKSVFGQDFERKRWIYQKYCQAMWKLSGVLFELLAMSLGVDRKHYKKFFEDGYSIVRFNFYPPCKNSALTLGTGPHYDPNSLTILHQEQVEGLEVFSNNKWQTIRPRSDALVINIG****
************************************NLP**FIWPNLE*AQEELREPLIDLHGFLSGDERATAEAIDLVRGACVNHGFFQVINHGVDASLLKAAIEETDSIFKLPLERKLSIPIKTGLAKGYAGAHAGRFTTNLPWKETFTFNYHEKDAEPLFVDYFKSVFGQDFERKRWIYQKYCQAMWKLSGVLFELLAMSLGVDRKHYKKFFEDGYSIVRFNFYPPCKNSALTLGTGPHYDPNSLTILHQEQVEGLEVFSNNKWQTIRPRSDALVINIGDTFV
***********PQPSMEQTQKNGSIVFDYHKLQKQANLPTEFIWPNLELAQEELREPLIDLHGFLSGDERATAEAIDLVRGACVNHGFFQVINHGVDASLLKAAIEETDSIFKLPLERKLSIPIKTGLAKGYAGAHAGRFTTNLPWKETFTFNYHEKDAEPLFVDYFKSVFGQDFERKRWIYQKYCQAMWKLSGVLFELLAMSLGVDRKHYKKFFEDGYSIVRFNFYPPCKNSALTLGTGPHYDPNSLTILHQEQVEGLEVFSNNKWQTIRPRSDALVINIGDTFV
************QPS*******GSIVFDYHKLQKQANLPTEFIWPNLELAQEELREPLIDLHGFLSGDERATAEAIDLVRGACVNHGFFQVINHGVDASLLKAAIEETDSIFKLPLERKLSIPIKTGLAKGYAGAHAGRFTTNLPWKETFTFNYHEKDAEPLFVDYFKSVFGQDFERKRWIYQKYCQAMWKLSGVLFELLAMSLGVDRKHYKKFFEDGYSIVRFNFYPPCKNSALTLGTGPHYDPNSLTILHQEQVEGLEVFSNNKWQTIRPRSDALVINIGD***
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
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MNSNKDSSVVLPQPSMEQTQKNGSIVFDYHKLQKQANLPTEFIWPNLELAQEELREPLIDLHGFLSGDERATAEAIDLVRGACVNHGFFQVINHGVDASLLKAAIEETDSIFKLPLERKLSIPIKTGLAKGYAGAHAGRFTTNLPWKETFTFNYHEKDAEPLFVDYFKSVFGQDFERKRWIYQKYCQAMWKLSGVLFELLAMSLGVDRKHYKKFFEDGYSIVRFNFYPPCKNSALTLGTGPHYDPNSLTILHQEQVEGLEVFSNNKWQTIRPRSDALVINIGDTFV
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query286 2.2.26 [Sep-21-2011]
O04706365 Gibberellin 20 oxidase 1- N/A no 0.909 0.712 0.505 1e-72
O04705361 Gibberellin 20 oxidase 1- N/A no 0.909 0.720 0.498 1e-70
O04707365 Gibberellin 20 oxidase 1- N/A no 0.909 0.712 0.490 3e-70
Q39112380 Gibberellin 20 oxidase 3 yes no 0.972 0.731 0.475 3e-66
Q39110377 Gibberellin 20 oxidase 1 no no 0.972 0.737 0.456 5e-66
Q39111378 Gibberellin 20 oxidase 2 no no 0.940 0.711 0.455 2e-65
Q0JH50389 Gibberellin 20 oxidase 2 yes no 0.891 0.655 0.457 2e-58
P0C5H5389 Gibberellin 20 oxidase 2 N/A no 0.891 0.655 0.457 2e-58
P93771372 Gibberellin 20 oxidase 1 no no 0.919 0.706 0.433 7e-57
D4N502360 Codeine O-demethylase OS= N/A no 0.779 0.619 0.346 4e-29
>sp|O04706|GAO1B_WHEAT Gibberellin 20 oxidase 1-B OS=Triticum aestivum GN=GA20ox1B PE=2 SV=1 Back     alignment and function desciption
 Score =  273 bits (698), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 134/265 (50%), Positives = 170/265 (64%), Gaps = 5/265 (1%)

Query: 26  VFDYHKLQKQANLPTEFIWPNLEL----AQEELREPLIDLHGFLSGDERATAEAIDLVRG 81
           VFD   L  +A++P++FIWP  E     A EEL  PLID+ G LSGD RATAE   LV  
Sbjct: 5   VFDAAVLSGRADIPSQFIWPEGESPTPDAAEELHVPLIDIGGMLSGDPRATAEVTRLVGE 64

Query: 82  ACVNHGFFQVINHGVDASLLKAAIEETDSIFKLPLERKLSIPIKTGLAKGYAGAHAGRFT 141
           AC  HGFFQV+NHG+DA LL  A    D+ F +PL  K     + G + GYA +  GRF 
Sbjct: 65  ACERHGFFQVVNHGIDAELLADAHRCVDAFFTMPLPEKQRALRRPGESCGYASSFTGRFA 124

Query: 142 TNLPWKETFTFNYHEKDAEPLFVDYFKSVFGQDFERKRWIYQKYCQAMWKLSGVLFELLA 201
           + LPWKET +F     D   L VDY  +  G+D  R   +Y +YC  M +LS  + E+L 
Sbjct: 125 SKLPWKETLSFRSCPSDPA-LVVDYIVATLGEDHRRLGEVYARYCSEMSRLSLEIMEVLG 183

Query: 202 MSLGVDRKHYKKFFEDGYSIVRFNFYPPCKNSALTLGTGPHYDPNSLTILHQEQVEGLEV 261
            SLGV R HY++FFE   SI+R N+YPPC+    TLGTGPH DP SLTILHQ+ V GL+V
Sbjct: 184 ESLGVGRAHYRRFFEGNDSIMRLNYYPPCQRPMETLGTGPHCDPTSLTILHQDNVGGLQV 243

Query: 262 FSNNKWQTIRPRSDALVINIGDTFV 286
            +  +W++IRPR+DA V+NIGDTF+
Sbjct: 244 HTEGRWRSIRPRADAFVVNIGDTFM 268
Key oxidase enzyme in the biosynthesis of gibberellin that catalyzes the conversion of GA12 and GA53 to GA9 and GA20 respectively, via a three-step oxidation at C-20 of the GA skeleton.
Triticum aestivum (taxid: 4565)
EC: 1EC: .EC: 1EC: 4EC: .EC: 1EC: 1EC: .EC: -
>sp|O04705|GAO1D_WHEAT Gibberellin 20 oxidase 1-D OS=Triticum aestivum GN=GA20ox1D PE=1 SV=1 Back     alignment and function description
>sp|O04707|GAO1A_WHEAT Gibberellin 20 oxidase 1-A OS=Triticum aestivum GN=GA20ox1A PE=2 SV=1 Back     alignment and function description
>sp|Q39112|GAOX3_ARATH Gibberellin 20 oxidase 3 OS=Arabidopsis thaliana GN=20ox3 PE=2 SV=1 Back     alignment and function description
>sp|Q39110|GAOX1_ARATH Gibberellin 20 oxidase 1 OS=Arabidopsis thaliana GN=20ox1 PE=2 SV=2 Back     alignment and function description
>sp|Q39111|GAOX2_ARATH Gibberellin 20 oxidase 2 OS=Arabidopsis thaliana GN=20ox2 PE=2 SV=1 Back     alignment and function description
>sp|Q0JH50|GAOX2_ORYSJ Gibberellin 20 oxidase 2 OS=Oryza sativa subsp. japonica GN=20ox2 PE=1 SV=1 Back     alignment and function description
>sp|P0C5H5|GAOX2_ORYSI Gibberellin 20 oxidase 2 OS=Oryza sativa subsp. indica GN=20ox2 PE=1 SV=1 Back     alignment and function description
>sp|P93771|GAOX1_ORYSJ Gibberellin 20 oxidase 1 OS=Oryza sativa subsp. japonica GN=20ox1 PE=2 SV=2 Back     alignment and function description
>sp|D4N502|DIOX3_PAPSO Codeine O-demethylase OS=Papaver somniferum GN=CODM PE=1 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query286
224096043378 gibberellin 20-oxidase [Populus trichoca 0.996 0.753 0.636 1e-105
224083474379 gibberellin 20-oxidase [Populus trichoca 0.958 0.722 0.658 1e-103
255572455 387 gibberellin 20-oxidase, putative [Ricinu 0.979 0.723 0.629 1e-100
222875436378 gibberellin 20-oxidase [Gossypium hirsut 0.989 0.748 0.6 2e-98
147916856381 GA 20-oxidase [Paeonia suffruticosa] 0.993 0.745 0.574 6e-97
225431689377 PREDICTED: gibberellin 20 oxidase 2 [Vit 0.979 0.742 0.584 3e-96
147865914 417 hypothetical protein VITISV_013034 [Viti 0.979 0.671 0.584 3e-96
357464719382 Gibberellin 20 oxidase [Medicago truncat 1.0 0.748 0.584 2e-95
363807030 392 uncharacterized protein LOC100777070 [Gl 1.0 0.729 0.573 6e-91
255573359380 gibberellin 20-oxidase, putative [Ricinu 0.909 0.684 0.612 7e-91
>gi|224096043|ref|XP_002310523.1| gibberellin 20-oxidase [Populus trichocarpa] gi|222853426|gb|EEE90973.1| gibberellin 20-oxidase [Populus trichocarpa] Back     alignment and taxonomy information
 Score =  385 bits (990), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 184/289 (63%), Positives = 228/289 (78%), Gaps = 4/289 (1%)

Query: 1   MNSNKDSSVVLPQPSMEQTQKNGSIVFDYHKLQKQANLPTEFIWPNLELA--QEELREPL 58
           M+S   S ++ P P + + +  G++VFD   LQKQA+LPTEF+WP+ +L   ++EL+EP+
Sbjct: 1   MDSTSSSLLLCPPPYLTKDE-TGALVFDSSFLQKQASLPTEFMWPHGDLVHNEDELKEPM 59

Query: 59  IDLHGFLSGDERATAEAIDLVRGACVNHGFFQVINHGVDASLLKAAIEETDSIFKLPLER 118
           IDL GFL GDE ATA+A +LVR AC+NHGFFQV NHGVD SL+ +A EE   IFKLPL++
Sbjct: 60  IDLEGFLKGDEVATAQAAELVRTACLNHGFFQVTNHGVDISLIHSAHEEIGKIFKLPLDK 119

Query: 119 KLSIPIKTGLAKGYAGAHAGRFTTNLPWKETFTFNYH-EKDAEPLFVDYFKSVFGQDFER 177
           KLS+  K G   GY+GAHA R+++ LPWKETF+F YH + D+ PL VDYFKSV G+DFE 
Sbjct: 120 KLSVRRKPGDVSGYSGAHAHRYSSKLPWKETFSFGYHGDDDSVPLVVDYFKSVLGKDFEH 179

Query: 178 KRWIYQKYCQAMWKLSGVLFELLAMSLGVDRKHYKKFFEDGYSIVRFNFYPPCKNSALTL 237
             W+YQ YC+AM K+S V+FELLA+SLGVDR HY+KFFEDG SI+R N+YPPC NS LTL
Sbjct: 180 TGWVYQSYCEAMKKVSLVIFELLAISLGVDRLHYRKFFEDGSSIMRCNYYPPCNNSTLTL 239

Query: 238 GTGPHYDPNSLTILHQEQVEGLEVFSNNKWQTIRPRSDALVINIGDTFV 286
           GTGPH DP SLTILHQ+QV GL+VFSNNKW  IRPR DALV+NIGDTF+
Sbjct: 240 GTGPHCDPTSLTILHQDQVGGLQVFSNNKWLAIRPRPDALVVNIGDTFM 288

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|224083474|ref|XP_002307041.1| gibberellin 20-oxidase [Populus trichocarpa] gi|222856490|gb|EEE94037.1| gibberellin 20-oxidase [Populus trichocarpa] Back     alignment and taxonomy information
>gi|255572455|ref|XP_002527163.1| gibberellin 20-oxidase, putative [Ricinus communis] gi|223533472|gb|EEF35218.1| gibberellin 20-oxidase, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|222875436|gb|ACM68924.1| gibberellin 20-oxidase [Gossypium hirsutum] Back     alignment and taxonomy information
>gi|147916856|gb|ABQ52488.1| GA 20-oxidase [Paeonia suffruticosa] Back     alignment and taxonomy information
>gi|225431689|ref|XP_002266536.1| PREDICTED: gibberellin 20 oxidase 2 [Vitis vinifera] gi|296088519|emb|CBI37510.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|147865914|emb|CAN78844.1| hypothetical protein VITISV_013034 [Vitis vinifera] Back     alignment and taxonomy information
>gi|357464719|ref|XP_003602641.1| Gibberellin 20 oxidase [Medicago truncatula] gi|355491689|gb|AES72892.1| Gibberellin 20 oxidase [Medicago truncatula] Back     alignment and taxonomy information
>gi|363807030|ref|NP_001242323.1| uncharacterized protein LOC100777070 [Glycine max] gi|255642379|gb|ACU21453.1| unknown [Glycine max] Back     alignment and taxonomy information
>gi|255573359|ref|XP_002527606.1| gibberellin 20-oxidase, putative [Ricinus communis] gi|223533023|gb|EEF34787.1| gibberellin 20-oxidase, putative [Ricinus communis] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query286
TAIR|locus:2182875380 GA20OX3 "gibberellin 20-oxidas 0.965 0.726 0.475 6.9e-63
TAIR|locus:2005511377 GA20OX1 [Arabidopsis thaliana 0.972 0.737 0.456 1e-61
TAIR|locus:2165341378 GA20OX2 "gibberellin 20 oxidas 0.940 0.711 0.462 5.5e-61
TAIR|locus:2206036376 GA20OX4 "gibberellin 20-oxidas 0.972 0.739 0.452 1.2e-58
TAIR|locus:2037159385 GA20OX5 "gibberellin 20-oxidas 0.926 0.688 0.433 2.9e-55
UNIPROTKB|P93771372 20ox1 "Gibberellin 20 oxidase 0.916 0.704 0.438 3.4e-54
UNIPROTKB|Q69LD8367 OSJNBa0050F10.19 "Putative gib 0.891 0.694 0.422 2.1e-52
UNIPROTKB|Q6L4Y3 408 OSJNBb0092E21.11 "Putative gib 0.912 0.639 0.404 8.3e-51
TAIR|locus:2089428364 LBO1 "LATERAL BRANCHING OXIDOR 0.772 0.607 0.324 2.4e-28
TAIR|locus:2085864352 AT3G19000 [Arabidopsis thalian 0.776 0.630 0.361 1.3e-27
TAIR|locus:2182875 GA20OX3 "gibberellin 20-oxidase 3" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 642 (231.1 bits), Expect = 6.9e-63, P = 6.9e-63
 Identities = 134/282 (47%), Positives = 171/282 (60%)

Query:    11 LPQPSMEQTQKNGSIVFDYHKLQKQAN-LPTEFIWPNLELAQEE---LREPLIDLHGFLS 66
             +PQ   E   K  S +FD   L + ++ +P +F+WP+ E    +   L+ PLIDL GFLS
Sbjct:     9 VPQIFSENKTKEDSSIFDAKLLNQHSHHIPQQFVWPDHEKPSTDVQPLQVPLIDLAGFLS 68

Query:    67 GDERATAEAIDLVRGACVNHGFFQVINHGVDASLLKAAIEETDSIFKLPLERKLSIPIKT 126
             GD    +EA  LV  A   HGFF + NHGVD SLL  A    DS FK P   K     K 
Sbjct:    69 GDSCLASEATRLVSKAATKHGFFLITNHGVDESLLSRAYLHMDSFFKAPACEKQKAQRKW 128

Query:   127 GLAKGYAGAHAGRFTTNLPWKETFTFNY--HEKDAEPLFVDYFKSVFGQDFERKRWIYQK 184
             G + GYA +  GRF++ LPWKET +F +   EK       D+     G  +E    +YQ+
Sbjct:   129 GESSGYASSFVGRFSSKLPWKETLSFKFSPEEKIHSQTVKDFVSKKMGDGYEDFGKVYQE 188

Query:   185 YCQAMWKLSGVLFELLAMSLGVDRKHYKKFFEDGYSIVRFNFYPPCKNSALTLGTGPHYD 244
             Y +AM  LS  + ELL MSLGV+R+++K+FFED  SI R N+YP CK   L LGTGPH D
Sbjct:   189 YAEAMNTLSLKIMELLGMSLGVERRYFKEFFEDSDSIFRLNYYPQCKQPELALGTGPHCD 248

Query:   245 PNSLTILHQEQVEGLEVFSNNKWQTIRPRSDALVINIGDTFV 286
             P SLTILHQ+QV GL+VF +NKWQ+I P   A V+NIGDTF+
Sbjct:   249 PTSLTILHQDQVGGLQVFVDNKWQSIPPNPHAFVVNIGDTFM 290
GO:0005506 "iron ion binding" evidence=IEA
GO:0005737 "cytoplasm" evidence=ISM
GO:0016491 "oxidoreductase activity" evidence=IEA
GO:0016706 "oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors" evidence=IEA
GO:0055114 "oxidation-reduction process" evidence=IEA
GO:0009686 "gibberellin biosynthetic process" evidence=IDA;RCA;TAS
GO:0009062 "fatty acid catabolic process" evidence=RCA
GO:0016114 "terpenoid biosynthetic process" evidence=RCA
GO:0045544 "gibberellin 20-oxidase activity" evidence=IDA
TAIR|locus:2005511 GA20OX1 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2165341 GA20OX2 "gibberellin 20 oxidase 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2206036 GA20OX4 "gibberellin 20-oxidase 4" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2037159 GA20OX5 "gibberellin 20-oxidase 5" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|P93771 20ox1 "Gibberellin 20 oxidase 1" [Oryza sativa Japonica Group (taxid:39947)] Back     alignment and assigned GO terms
UNIPROTKB|Q69LD8 OSJNBa0050F10.19 "Putative gibberellin 20-dioxygenase" [Oryza sativa Japonica Group (taxid:39947)] Back     alignment and assigned GO terms
UNIPROTKB|Q6L4Y3 OSJNBb0092E21.11 "Putative gibberellin 20-oxidase" [Oryza sativa Japonica Group (taxid:39947)] Back     alignment and assigned GO terms
TAIR|locus:2089428 LBO1 "LATERAL BRANCHING OXIDOREDUCTASE 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2085864 AT3G19000 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer1.14.11LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query286
PLN02276361 PLN02276, PLN02276, gibberellin 20-oxidase 1e-157
PLN02758361 PLN02758, PLN02758, oxidoreductase, 2OG-Fe(II) oxy 5e-38
PLN02393362 PLN02393, PLN02393, leucoanthocyanidin dioxygenase 2e-37
PLN02639337 PLN02639, PLN02639, oxidoreductase, 2OG-Fe(II) oxy 5e-36
COG3491322 COG3491, PcbC, Isopenicillin N synthase and relate 1e-33
PLN02750345 PLN02750, PLN02750, oxidoreductase, 2OG-Fe(II) oxy 2e-32
PLN02254358 PLN02254, PLN02254, gibberellin 3-beta-dioxygenase 3e-32
PLN02947374 PLN02947, PLN02947, oxidoreductase 5e-28
PLN03178360 PLN03178, PLN03178, leucoanthocyanidin dioxygenase 2e-26
PLN02216357 PLN02216, PLN02216, protein SRG1 2e-26
PLN02515358 PLN02515, PLN02515, naringenin,2-oxoglutarate 3-di 4e-26
pfam14226113 pfam14226, DIOX_N, non-haem dioxygenase in morphin 8e-24
PLN02912348 PLN02912, PLN02912, oxidoreductase, 2OG-Fe(II) oxy 1e-21
PLN02904357 PLN02904, PLN02904, oxidoreductase 2e-21
PTZ00273320 PTZ00273, PTZ00273, oxidase reductase; Provisional 2e-19
PLN02984341 PLN02984, PLN02984, oxidoreductase, 2OG-Fe(II) oxy 3e-19
PLN02704335 PLN02704, PLN02704, flavonol synthase 6e-18
PLN02299321 PLN02299, PLN02299, 1-aminocyclopropane-1-carboxyl 2e-16
PLN00417348 PLN00417, PLN00417, oxidoreductase, 2OG-Fe(II) oxy 4e-16
PLN03001262 PLN03001, PLN03001, oxidoreductase, 2OG-Fe(II) oxy 4e-16
pfam0317196 pfam03171, 2OG-FeII_Oxy, 2OG-Fe(II) oxygenase supe 7e-16
PLN02997325 PLN02997, PLN02997, flavonol synthase 2e-15
PLN02365300 PLN02365, PLN02365, 2-oxoglutarate-dependent dioxy 1e-14
PLN02403303 PLN02403, PLN02403, aminocyclopropanecarboxylate o 4e-14
PLN02156335 PLN02156, PLN02156, gibberellin 2-beta-dioxygenase 9e-13
PLN03002332 PLN03002, PLN03002, oxidoreductase, 2OG-Fe(II) oxy 2e-10
PLN02485329 PLN02485, PLN02485, oxidoreductase 1e-08
PLN03176120 PLN03176, PLN03176, flavanone-3-hydroxylase; Provi 1e-06
>gnl|CDD|215156 PLN02276, PLN02276, gibberellin 20-oxidase Back     alignment and domain information 
 Score =  443 bits (1141), Expect = e-157
 Identities = 164/270 (60%), Positives = 204/270 (75%), Gaps = 4/270 (1%)

Query: 20  QKNGSIVFDYHKLQKQANLPTEFIWPNLE---LAQEELREPLIDLHGFLSGDERATAEAI 76
           ++ GS+VFD   LQKQ+N+P +FIWP+ E    A  EL  PLIDL GFLSGDE ATAEA 
Sbjct: 2   REQGSLVFDASVLQKQSNIPAQFIWPDEEKPSAAVPELAVPLIDLGGFLSGDEAATAEAA 61

Query: 77  DLVRGACVNHGFFQVINHGVDASLLKAAIEETDSIFKLPLERKLSIPIKTGLAKGYAGAH 136
            LVR AC+ HGFFQV+NHGVDA+L++AA E  D+ FKLPL  K     K G + GYA +H
Sbjct: 62  RLVREACLKHGFFQVVNHGVDAALIRAAHEYMDAFFKLPLSEKQRAQRKPGESCGYASSH 121

Query: 137 AGRFTTNLPWKETFTFNYH-EKDAEPLFVDYFKSVFGQDFERKRWIYQKYCQAMWKLSGV 195
            GRF++ LPWKET +F YH +  + P+ VDYFKSV G+DFE+   +YQ+YC+AM  LS  
Sbjct: 122 TGRFSSKLPWKETLSFGYHADGGSSPVVVDYFKSVLGEDFEQFGKVYQEYCEAMKTLSLK 181

Query: 196 LFELLAMSLGVDRKHYKKFFEDGYSIVRFNFYPPCKNSALTLGTGPHYDPNSLTILHQEQ 255
           + ELL +SLGVDR +Y+KFFEDG SI+R N+YPPC+   LTLGTGPH DP SLTILHQ+Q
Sbjct: 182 IMELLGISLGVDRGYYRKFFEDGDSIMRCNYYPPCQEPELTLGTGPHCDPTSLTILHQDQ 241

Query: 256 VEGLEVFSNNKWQTIRPRSDALVINIGDTF 285
           V GL+VF +NKW+++RPR  ALV+NIGDTF
Sbjct: 242 VGGLQVFVDNKWRSVRPRPGALVVNIGDTF 271

Length = 361
>gnl|CDD|215404 PLN02758, PLN02758, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|215220 PLN02393, PLN02393, leucoanthocyanidin dioxygenase like protein Back     alignment and domain information
>gnl|CDD|178245 PLN02639, PLN02639, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|226022 COG3491, PcbC, Isopenicillin N synthase and related dioxygenases [General function prediction only] Back     alignment and domain information
>gnl|CDD|178351 PLN02750, PLN02750, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|215142 PLN02254, PLN02254, gibberellin 3-beta-dioxygenase Back     alignment and domain information
>gnl|CDD|215510 PLN02947, PLN02947, oxidoreductase Back     alignment and domain information
>gnl|CDD|215614 PLN03178, PLN03178, leucoanthocyanidin dioxygenase; Provisional Back     alignment and domain information
>gnl|CDD|215129 PLN02216, PLN02216, protein SRG1 Back     alignment and domain information
>gnl|CDD|178130 PLN02515, PLN02515, naringenin,2-oxoglutarate 3-dioxygenase Back     alignment and domain information
>gnl|CDD|222608 pfam14226, DIOX_N, non-haem dioxygenase in morphine synthesis N-terminal Back     alignment and domain information
>gnl|CDD|178500 PLN02912, PLN02912, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|178492 PLN02904, PLN02904, oxidoreductase Back     alignment and domain information
>gnl|CDD|140299 PTZ00273, PTZ00273, oxidase reductase; Provisional Back     alignment and domain information
>gnl|CDD|215534 PLN02984, PLN02984, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|166345 PLN02704, PLN02704, flavonol synthase Back     alignment and domain information
>gnl|CDD|215168 PLN02299, PLN02299, 1-aminocyclopropane-1-carboxylate oxidase Back     alignment and domain information
>gnl|CDD|177810 PLN00417, PLN00417, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|166642 PLN03001, PLN03001, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|217403 pfam03171, 2OG-FeII_Oxy, 2OG-Fe(II) oxygenase superfamily Back     alignment and domain information
>gnl|CDD|178576 PLN02997, PLN02997, flavonol synthase Back     alignment and domain information
>gnl|CDD|177993 PLN02365, PLN02365, 2-oxoglutarate-dependent dioxygenase Back     alignment and domain information
>gnl|CDD|178025 PLN02403, PLN02403, aminocyclopropanecarboxylate oxidase Back     alignment and domain information
>gnl|CDD|177816 PLN02156, PLN02156, gibberellin 2-beta-dioxygenase Back     alignment and domain information
>gnl|CDD|178579 PLN03002, PLN03002, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|215267 PLN02485, PLN02485, oxidoreductase Back     alignment and domain information
>gnl|CDD|178720 PLN03176, PLN03176, flavanone-3-hydroxylase; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 286
PLN02758361 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02276361 gibberellin 20-oxidase 100.0
PLN02216357 protein SRG1 100.0
PLN02947374 oxidoreductase 100.0
PLN02393362 leucoanthocyanidin dioxygenase like protein 100.0
PLN03178360 leucoanthocyanidin dioxygenase; Provisional 100.0
PLN02254358 gibberellin 3-beta-dioxygenase 100.0
PLN02515358 naringenin,2-oxoglutarate 3-dioxygenase 100.0
PLN00417348 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02912348 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02904357 oxidoreductase 100.0
KOG0143322 consensus Iron/ascorbate family oxidoreductases [S 100.0
PLN02639337 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02750345 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02704335 flavonol synthase 100.0
PTZ00273320 oxidase reductase; Provisional 100.0
COG3491322 PcbC Isopenicillin N synthase and related dioxygen 100.0
PLN02997325 flavonol synthase 100.0
PLN02299321 1-aminocyclopropane-1-carboxylate oxidase 100.0
PLN02485329 oxidoreductase 100.0
PLN03002332 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02984341 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02156335 gibberellin 2-beta-dioxygenase 100.0
PLN02403303 aminocyclopropanecarboxylate oxidase 100.0
PLN02365300 2-oxoglutarate-dependent dioxygenase 100.0
PLN03001262 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PF14226116 DIOX_N: non-haem dioxygenase in morphine synthesis 99.93
PLN03176120 flavanone-3-hydroxylase; Provisional 99.9
PF0317198 2OG-FeII_Oxy: 2OG-Fe(II) oxygenase superfamily Ent 99.56
smart00702178 P4Hc Prolyl 4-hydroxylase alpha subunit homologues 90.24
PF13640100 2OG-FeII_Oxy_3: 2OG-Fe(II) oxygenase superfamily; 89.87
>PLN02758 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information 
Probab=100.00  E-value=6.6e-65  Score=467.66  Aligned_cols=255  Identities=31%  Similarity=0.523  Sum_probs=226.9

Q ss_pred             eehhhhhccCCCCCCCccCCCCcc-C-c-----CCCCCceeeCCCCCCCCHHHHHHHHHHHHHHhhhccEEEEEeCCCCH
Q 042504           26 VFDYHKLQKQANLPTEFIWPNLEL-A-Q-----EELREPLIDLHGFLSGDERATAEAIDLVRGACVNHGFFQVINHGVDA   98 (286)
Q Consensus        26 ~~~~~~~~~~~~iP~~~i~p~~~~-~-~-----~~~~iPvIDl~~l~~~d~~~~~~~~~~l~~A~~~~GfF~v~nhGi~~   98 (286)
                      .++.|+++|.++||.+|++|.+++ . .     ...+||||||+.+.+++..++++++++|++||++||||||+||||+.
T Consensus        16 ~~~~l~~~~~~~vp~~~v~~~~~~p~~~~~~~~~~~~IPvIDl~~l~~~~~~~~~~~~~~l~~Ac~~~GFF~v~nHGi~~   95 (361)
T PLN02758         16 DVQELRKSKPTTVPERFIRDMDERPDLASDTLHAPDDIPVIDFSRLVKGDNDELFSEILKLRLACEEWGFFQVINHGIEL   95 (361)
T ss_pred             cHHHHHhcCCCCCCHHHcCCchhccccccccccCCCCCCeEEchhhcCCChHHHHHHHHHHHHHHHhCeEEEEecCCCCH
Confidence            368999999999999999999877 2 1     34589999999998777777778899999999999999999999999


Q ss_pred             HHHHHHHHHHHhhcCCCHHHHhcCCcCCCCCCCccCCCCCccccCCCccccccccccCCCCccchhccccccCCcchhHH
Q 042504           99 SLLKAAIEETDSIFKLPLERKLSIPIKTGLAKGYAGAHAGRFTTNLPWKETFTFNYHEKDAEPLFVDYFKSVFGQDFERK  178 (286)
Q Consensus        99 ~l~~~~~~~~~~FF~lp~eeK~~~~~~~~~~~GY~~~~~~~~~~~~d~~E~~~~~~~p~~~~~~~~~wp~~~~~~~~~~f  178 (286)
                      ++++++++.+++||+||.|+|+++...++..+||+........+..||+|.|.++..|.. ....+.||..     .++|
T Consensus        96 ~l~~~~~~~~~~FF~LP~eeK~k~~~~~~~~~GY~~~~~~~~~~~~d~~e~~~~~~~p~~-~~~~~~WP~~-----~~~f  169 (361)
T PLN02758         96 ELLEEIEKVAREFFMLPLEEKQKYPMAPGTVQGYGQAFVFSEDQKLDWCNMFALGVEPHF-IRNPKLWPTK-----PARF  169 (361)
T ss_pred             HHHHHHHHHHHHHhcCCHHHHHHhcccCCCccccCcccccccccccCeeEEEEeeccCcc-ccccccCccc-----cHHH
Confidence            999999999999999999999999876556789976544333566799999998766543 2346778864     3789


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHcCCChhHHHHhhcCCcceeEEeecCCCCCCCCCccccccccCCceEEEecCC--C
Q 042504          179 RWIYQKYCQAMWKLSGVLFELLAMSLGVDRKHYKKFFEDGYSIVRFNFYPPCKNSALTLGTGPHYDPNSLTILHQEQ--V  256 (286)
Q Consensus       179 r~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~~~~~~~~~~~~lr~~~YP~~~~~~~~~g~~~HtD~~~lTlL~qd~--v  256 (286)
                      |+++++|+++|++|+.+||++|+++||+++++|.+.+....+.||+||||+|+.++..+|+++|||+|+||||+||+  +
T Consensus       170 r~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~~~~~~~~~~lR~~~YP~~~~~~~~~g~~~HtD~g~lTlL~qd~~~v  249 (361)
T PLN02758        170 SETLEVYSREIRELCQRLLKYIAMTLGLKEDRFEEMFGEAVQAVRMNYYPPCSRPDLVLGLSPHSDGSALTVLQQGKGSC  249 (361)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHcCCChhhhHHHhcCccceeeeecCCCCCCcccccCccCccCCceeEEEEeCCCCC
Confidence            99999999999999999999999999999999999998888999999999999999999999999999999999974  8


Q ss_pred             CceEEEeCCeEEEeccCCCcEEEecCCCCC
Q 042504          257 EGLEVFSNNKWQTIRPRSDALVINIGDTFV  286 (286)
Q Consensus       257 ~GLqV~~~g~W~~V~p~pg~~vVNiGD~lq  286 (286)
                      +||||+++|+|++|+|+||++|||+||+||
T Consensus       250 ~GLQV~~~g~Wi~V~p~pgalVVNiGD~L~  279 (361)
T PLN02758        250 VGLQILKDNTWVPVHPVPNALVINIGDTLE  279 (361)
T ss_pred             CCeeeeeCCEEEeCCCCCCeEEEEccchhh
Confidence            999999999999999999999999999996

>PLN02276 gibberellin 20-oxidase Back     alignment and domain information
>PLN02216 protein SRG1 Back     alignment and domain information
>PLN02947 oxidoreductase Back     alignment and domain information
>PLN02393 leucoanthocyanidin dioxygenase like protein Back     alignment and domain information
>PLN03178 leucoanthocyanidin dioxygenase; Provisional Back     alignment and domain information
>PLN02254 gibberellin 3-beta-dioxygenase Back     alignment and domain information
>PLN02515 naringenin,2-oxoglutarate 3-dioxygenase Back     alignment and domain information
>PLN00417 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02912 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02904 oxidoreductase Back     alignment and domain information
>KOG0143 consensus Iron/ascorbate family oxidoreductases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only] Back     alignment and domain information
>PLN02639 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02750 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02704 flavonol synthase Back     alignment and domain information
>PTZ00273 oxidase reductase; Provisional Back     alignment and domain information
>COG3491 PcbC Isopenicillin N synthase and related dioxygenases [General function prediction only] Back     alignment and domain information
>PLN02997 flavonol synthase Back     alignment and domain information
>PLN02299 1-aminocyclopropane-1-carboxylate oxidase Back     alignment and domain information
>PLN02485 oxidoreductase Back     alignment and domain information
>PLN03002 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02984 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02156 gibberellin 2-beta-dioxygenase Back     alignment and domain information
>PLN02403 aminocyclopropanecarboxylate oxidase Back     alignment and domain information
>PLN02365 2-oxoglutarate-dependent dioxygenase Back     alignment and domain information
>PLN03001 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PF14226 DIOX_N: non-haem dioxygenase in morphine synthesis N-terminal; PDB: 3OOX_A 1BK0_A 1IPS_B 1QIQ_A 1OC1_A 2Y86_A 2Y60_A 1W03_A 2VE1_A 1QJF_A Back     alignment and domain information
>PLN03176 flavanone-3-hydroxylase; Provisional Back     alignment and domain information
>PF03171 2OG-FeII_Oxy: 2OG-Fe(II) oxygenase superfamily Entry for Lysyl hydrolases This Prosite entry is a sub-family of the Pfam entry; InterPro: IPR005123 This domain is found in members of the 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily [], as well as the C-terminal of prolyl 4-hydroxylase alpha subunit Back     alignment and domain information
>smart00702 P4Hc Prolyl 4-hydroxylase alpha subunit homologues Back     alignment and domain information
>PF13640 2OG-FeII_Oxy_3: 2OG-Fe(II) oxygenase superfamily; PDB: 3DKQ_B 3GZE_D 3HQR_A 2Y34_A 2G1M_A 2G19_A 3OUI_A 3OUJ_A 2HBU_A 2Y33_A Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query286
2brt_A355 Anthocyanidin Synthase From Arabidopsis Thaliana Co 4e-21
1gp5_A356 Anthocyanidin Synthase From Arabidopsis Thaliana Co 4e-21
1gp4_A356 Anthocyanidin Synthase From Arabidopsis Thaliana (S 6e-20
1w9y_A319 The Structure Of Acc Oxidase Length = 319 3e-15
3oox_A312 Crystal Structure Of A Putative 2og-Fe(Ii) Oxygenas 6e-14
2bjs_A325 Isopenicillin N Synthase C-Terminal Truncation Muta 5e-06
1ips_A331 Isopenicillin N Synthase From Aspergillus Nidulans 6e-06
>pdb|2BRT|A Chain A, Anthocyanidin Synthase From Arabidopsis Thaliana Complexed With Naringenin Length = 355 Back     alignment and structure 
Iteration: 1

 Score = 98.6 bits (244), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 72/271 (26%), Positives = 125/271 (46%), Gaps = 34/271 (12%)
Query: 37  NLPTEFIWPNLELAQ------EELRE-----PLIDLHGFLSGDERATAEAIDLVRGACVN 85
           ++P E+I P  EL        EE +E     P IDL    S DE+     I+ ++ A ++
Sbjct: 16  SIPKEYIRPKEELESINDVFLEEKKEDGPQVPTIDLKNIESDDEKIRENCIEELKKASLD 75
Query: 86  HGFFQVINHGVDASLLKAAIEETDSIFKLPLERK--LSIPIKTGLAKGYAGAHAGRFTTN 143
            G   +INHG+ A L++   +  +  F L +E K   +    TG  +GY    A   +  
Sbjct: 76  WGVMHLINHGIPADLMERVKKAGEEFFSLSVEEKEKYANDQATGKIQGYGSKLANNASGQ 135
Query: 144 LPWKETFTFNYHEKDAEPLFV------DYFKSVFGQDFERKRWIYQKYCQAMWKLSGVLF 197
           L W++ F    + ++   L +      DY ++              +Y + +  L+  +F
Sbjct: 136 LEWEDYFFHLAYPEEKRDLSIWPKTPSDYIEAT------------SEYAKCLRLLATKVF 183
Query: 198 ELLAMSLGVDRKHYKK---FFEDGYSIVRFNFYPPCKNSALTLGTGPHYDPNSLTILHQE 254
           + L++ LG++    +K     E+    ++ N+YP C    L LG   H D ++LT +   
Sbjct: 184 KALSVGLGLEPDRLEKEVGGLEELLLQMKINYYPKCPQPELALGVEAHTDVSALTFILHN 243
Query: 255 QVEGLEVFSNNKWQTIRPRSDALVINIGDTF 285
            V GL++F   KW T +   D++V++IGDT 
Sbjct: 244 MVPGLQLFYEGKWVTAKCVPDSIVMHIGDTL 274
>pdb|1GP5|A Chain A, Anthocyanidin Synthase From Arabidopsis Thaliana Complexed With Trans-Dihydroquercetin Length = 356 Back     alignment and structure
>pdb|1GP4|A Chain A, Anthocyanidin Synthase From Arabidopsis Thaliana (Selenomethionine Substituted) Length = 356 Back     alignment and structure
>pdb|1W9Y|A Chain A, The Structure Of Acc Oxidase Length = 319 Back     alignment and structure
>pdb|3OOX|A Chain A, Crystal Structure Of A Putative 2og-Fe(Ii) Oxygenase Family Protein (Cc_0200) From Caulobacter Crescentus At 1.44 A Resolution Length = 312 Back     alignment and structure
>pdb|2BJS|A Chain A, Isopenicillin N Synthase C-Terminal Truncation Mutant Length = 325 Back     alignment and structure
>pdb|1IPS|A Chain A, Isopenicillin N Synthase From Aspergillus Nidulans (Manganese Complex) Length = 331 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query286
1gp6_A356 Leucoanthocyanidin dioxygenase; 2-oxoglutarate dep 1e-86
1w9y_A319 1-aminocyclopropane-1-carboxylate oxidase 1; oxyge 2e-69
1odm_A331 Isopenicillin N synthase; antibiotic biosynthesis, 9e-67
3oox_A312 Putative 2OG-Fe(II) oxygenase family protein; stru 8e-57
1dcs_A311 Deacetoxycephalosporin C synthase; ferrous oxygena 6e-52
3on7_A280 Oxidoreductase, iron/ascorbate family; structural 1e-46
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 3e-09
>1gp6_A Leucoanthocyanidin dioxygenase; 2-oxoglutarate dependent dioxygenase, flavonoid biosynthesis; HET: MES QUE DH2; 1.75A {Arabidopsis thaliana} SCOP: b.82.2.1 PDB: 1gp5_A* 1gp4_A* 2brt_A* Length = 356 Back     alignment and structure
 Score =  261 bits (670), Expect = 1e-86
 Identities = 68/265 (25%), Positives = 123/265 (46%), Gaps = 22/265 (8%)

Query: 37  NLPTEFIWPNLEL-----------AQEELREPLIDLHGFLSGDERATAEAIDLVRGACVN 85
           ++P E+I P  EL            ++  + P IDL    S DE+     I+ ++ A ++
Sbjct: 17  SIPKEYIRPKEELESINDVFLEEKKEDGPQVPTIDLKNIESDDEKIRENCIEELKKASLD 76

Query: 86  HGFFQVINHGVDASLLKAAIEETDSIFKLPLE--RKLSIPIKTGLAKGYAGAHAGRFTTN 143
            G   +INHG+ A L++   +  +  F L +E   K +    TG  +GY    A   +  
Sbjct: 77  WGVMHLINHGIPADLMERVKKAGEEFFSLSVEEKEKYANDQATGKIQGYGSKLANNASGQ 136

Query: 144 LPWKETFTFNYHEKDAEPLFVDYFKSVFGQDFERKRWIYQKYCQAMWKLSGVLFELLAMS 203
           L W++ F    + ++   L      S++ +          +Y + +  L+  +F+ L++ 
Sbjct: 137 LEWEDYFFHLAYPEEKRDL------SIWPKTPSDYIEATSEYAKCLRLLATKVFKALSVG 190

Query: 204 LGVDRKHYKKFF---EDGYSIVRFNFYPPCKNSALTLGTGPHYDPNSLTILHQEQVEGLE 260
           LG++    +K     E+    ++ N+YP C    L LG   H D ++LT +    V GL+
Sbjct: 191 LGLEPDRLEKEVGGLEELLLQMKINYYPKCPQPELALGVEAHTDVSALTFILHNMVPGLQ 250

Query: 261 VFSNNKWQTIRPRSDALVINIGDTF 285
           +F   KW T +   D++V++IGDT 
Sbjct: 251 LFYEGKWVTAKCVPDSIVMHIGDTL 275
>1w9y_A 1-aminocyclopropane-1-carboxylate oxidase 1; oxygenase, 2OG oxygenase, ACCO, ACC oxidase; 2.1A {Petunia hybrida} SCOP: b.82.2.1 PDB: 1wa6_X Length = 319 Back     alignment and structure
>1odm_A Isopenicillin N synthase; antibiotic biosynthesis, B-lactam antibiotic, oxygenase, penicillin biosynthesis, oxidoreductase, iron; HET: ASV; 1.15A {Emericella nidulans} SCOP: b.82.2.1 PDB: 1blz_A* 1hb1_A* 1hb2_A* 1hb3_A* 1hb4_A* 1ips_A 1obn_A* 1oc1_A* 1bk0_A* 1odn_A* 1qiq_A* 1qje_A* 1qjf_A* 1uzw_A* 1w03_A* 1w04_A* 1w05_A* 1w06_A* 1w3v_A* 1w3x_A* ... Length = 331 Back     alignment and structure
>3oox_A Putative 2OG-Fe(II) oxygenase family protein; structural genomics, joint center for structural genomics; HET: MSE; 1.44A {Caulobacter crescentus CB15} Length = 312 Back     alignment and structure
>1dcs_A Deacetoxycephalosporin C synthase; ferrous oxygenase, 2-oxoglutarate, oxidoreduc antibiotics, merohedral twinning; 1.30A {Streptomyces clavuligerus} SCOP: b.82.2.1 PDB: 1rxf_A 1rxg_A* 1unb_A* 1uo9_A 1uob_A* 1uof_A* 1uog_A* 2jb8_A 1w28_A 1w2a_X 1w2n_A* 1w2o_A* 1hjg_A 1hjf_A 1e5h_A 1e5i_A* Length = 311 Back     alignment and structure
>3on7_A Oxidoreductase, iron/ascorbate family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.20A {Shewanella oneidensis} Length = 280 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query286
1gp6_A356 Leucoanthocyanidin dioxygenase; 2-oxoglutarate dep 100.0
3oox_A312 Putative 2OG-Fe(II) oxygenase family protein; stru 100.0
1w9y_A319 1-aminocyclopropane-1-carboxylate oxidase 1; oxyge 100.0
1odm_A331 Isopenicillin N synthase; antibiotic biosynthesis, 100.0
1dcs_A311 Deacetoxycephalosporin C synthase; ferrous oxygena 100.0
3on7_A280 Oxidoreductase, iron/ascorbate family; structural 100.0
3dkq_A243 PKHD-type hydroxylase SBAL_3634; putative oxygenas 88.15
>1gp6_A Leucoanthocyanidin dioxygenase; 2-oxoglutarate dependent dioxygenase, flavonoid biosynthesis; HET: MES QUE DH2; 1.75A {Arabidopsis thaliana} SCOP: b.82.2.1 PDB: 1gp5_A* 1gp4_A* 2brt_A* Back     alignment and structure
Probab=100.00  E-value=6.6e-66  Score=473.67  Aligned_cols=256  Identities=25%  Similarity=0.436  Sum_probs=228.9

Q ss_pred             eeehhhhhccCCCCCCCccCCCCcc-C-cC---------CCCCceeeCCCCCCCCHHHHHHHHHHHHHHhhhccEEEEEe
Q 042504           25 IVFDYHKLQKQANLPTEFIWPNLEL-A-QE---------ELREPLIDLHGFLSGDERATAEAIDLVRGACVNHGFFQVIN   93 (286)
Q Consensus        25 ~~~~~~~~~~~~~iP~~~i~p~~~~-~-~~---------~~~iPvIDl~~l~~~d~~~~~~~~~~l~~A~~~~GfF~v~n   93 (286)
                      ..|++|+++|+.+||.+|++|.+++ . ..         ..+||||||+.|.++++++|++++++|++||++||||||+|
T Consensus         5 ~~v~~l~~~~~~~vP~~~~~p~~~~~~~~~~~~~~~~~~~~~iPvIDls~l~~~~~~~~~~~~~~l~~A~~~~GFF~v~n   84 (356)
T 1gp6_A            5 ERVESLAKSGIISIPKEYIRPKEELESINDVFLEEKKEDGPQVPTIDLKNIESDDEKIRENCIEELKKASLDWGVMHLIN   84 (356)
T ss_dssp             CCHHHHHHTTCSSCCGGGSCCHHHHTTCCCHHHHHHCCCSCCCCEEECTTTTCSCHHHHHHHHHHHHHHHHHTSEEEEES
T ss_pred             ccHHHHHhcCCCCCCHHhcCCchhcccccccccccccccCCCCCEEEchhccCCChHHHHHHHHHHHHHHHhCCEEEEeC
Confidence            3479999999999999999998776 2 21         23699999999988888889999999999999999999999


Q ss_pred             CCCCHHHHHHHHHHHHhhcCCCHHHHhcCCcCCC--CCCCccCCCCCccccCCCccccccccccCCCCccchhccccccC
Q 042504           94 HGVDASLLKAAIEETDSIFKLPLERKLSIPIKTG--LAKGYAGAHAGRFTTNLPWKETFTFNYHEKDAEPLFVDYFKSVF  171 (286)
Q Consensus        94 hGi~~~l~~~~~~~~~~FF~lp~eeK~~~~~~~~--~~~GY~~~~~~~~~~~~d~~E~~~~~~~p~~~~~~~~~wp~~~~  171 (286)
                      |||+.++++++++.+++||+||.|+|+++.....  .++||+........+..||+|+|+++..|.. ....+.||..  
T Consensus        85 HGi~~~l~~~~~~~~~~FF~lP~eeK~~~~~~~~~~~~~Gy~~~~~~~~~~~~d~kE~~~~~~~p~~-~~~~~~wP~~--  161 (356)
T 1gp6_A           85 HGIPADLMERVKKAGEEFFSLSVEEKEKYANDQATGKIQGYGSKLANNASGQLEWEDYFFHLAYPEE-KRDLSIWPKT--  161 (356)
T ss_dssp             CSCCHHHHHHHHHHHHHHHTSCHHHHGGGBCBGGGTBCSEEECCCCCSTTCCCCSCEEEEEEEESGG-GCCGGGSCCS--
T ss_pred             CCCCHHHHHHHHHHHHHHHCCCHHHHHhhcccccccCccccCcCcccCCCCCCChhheeeeecCCcc-ccccccCCCc--
Confidence            9999999999999999999999999999987543  5899988765555677899999999865543 2345678864  


Q ss_pred             CcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhHHHHhhc---CCcceeEEeecCCCCCCCCCccccccccCCce
Q 042504          172 GQDFERKRWIYQKYCQAMWKLSGVLFELLAMSLGVDRKHYKKFFE---DGYSIVRFNFYPPCKNSALTLGTGPHYDPNSL  248 (286)
Q Consensus       172 ~~~~~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~~~~~~~---~~~~~lr~~~YP~~~~~~~~~g~~~HtD~~~l  248 (286)
                         .++||+++++|+++|++|+.+||++|+++||+++++|.+.+.   .+.+.||+||||||++++.++|+++|||+|+|
T Consensus       162 ---~~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~~~~~~~~~~~~~lrl~~YPp~~~~~~~~g~~~HtD~g~l  238 (356)
T 1gp6_A          162 ---PSDYIEATSEYAKCLRLLATKVFKALSVGLGLEPDRLEKEVGGLEELLLQMKINYYPKCPQPELALGVEAHTDVSAL  238 (356)
T ss_dssp             ---STTHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCTTHHHHHTTHHHHCEEEEEEEEECCCSSTTTCCSEEEECCCSSE
T ss_pred             ---chhhhHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHhcccCCccceeeeeecCCCCCcccccCcCCccCCCeE
Confidence               378999999999999999999999999999999999999987   57789999999999999889999999999999


Q ss_pred             EEEecCCCCceEEEeCCeEEEeccCCCcEEEecCCCCC
Q 042504          249 TILHQEQVEGLEVFSNNKWQTIRPRSDALVINIGDTFV  286 (286)
Q Consensus       249 TlL~qd~v~GLqV~~~g~W~~V~p~pg~~vVNiGD~lq  286 (286)
                      |||+||+++||||+++|+|++|+|+||+|||||||+||
T Consensus       239 TlL~qd~v~GLQV~~~g~Wi~V~p~pgalvVNiGD~l~  276 (356)
T 1gp6_A          239 TFILHNMVPGLQLFYEGKWVTAKCVPDSIVMHIGDTLE  276 (356)
T ss_dssp             EEEEECSCCCEEEEETTEEEECCCCTTCEEEEECHHHH
T ss_pred             EEEEEcCCCCeEEecCCcEEECcCCCCeEEEEeccHHH
Confidence            99999999999999999999999999999999999985
>3oox_A Putative 2OG-Fe(II) oxygenase family protein; structural genomics, joint center for structural genomics; HET: MSE; 1.44A {Caulobacter crescentus CB15} Back     alignment and structure
>1w9y_A 1-aminocyclopropane-1-carboxylate oxidase 1; oxygenase, 2OG oxygenase, ACCO, ACC oxidase; 2.1A {Petunia hybrida} SCOP: b.82.2.1 PDB: 1wa6_X Back     alignment and structure
>1odm_A Isopenicillin N synthase; antibiotic biosynthesis, B-lactam antibiotic, oxygenase, penicillin biosynthesis, oxidoreductase, iron; HET: ASV; 1.15A {Emericella nidulans} SCOP: b.82.2.1 PDB: 1blz_A* 1hb1_A* 1hb2_A* 1hb3_A* 1hb4_A* 1ips_A 1obn_A* 1oc1_A* 1bk0_A* 1odn_A* 1qiq_A* 1qje_A* 1qjf_A* 1uzw_A* 1w03_A* 1w04_A* 1w05_A* 1w06_A* 1w3v_A* 1w3x_A* ... Back     alignment and structure
>1dcs_A Deacetoxycephalosporin C synthase; ferrous oxygenase, 2-oxoglutarate, oxidoreduc antibiotics, merohedral twinning; 1.30A {Streptomyces clavuligerus} SCOP: b.82.2.1 PDB: 1rxf_A 1rxg_A* 1unb_A* 1uo9_A 1uob_A* 1uof_A* 1uog_A* 2jb8_A 1w28_A 1w2a_X 1w2n_A* 1w2o_A* 1hjg_A 1hjf_A 1e5h_A 1e5i_A* Back     alignment and structure
>3on7_A Oxidoreductase, iron/ascorbate family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.20A {Shewanella oneidensis} Back     alignment and structure
>3dkq_A PKHD-type hydroxylase SBAL_3634; putative oxygenase, structural genomics, JOI for structural genomics, JCSG; 2.26A {Shewanella baltica OS155} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 286
d1gp6a_349 b.82.2.1 (A:) Anthocyanidin synthase {Mouse-ear cr 3e-37
d1w9ya1307 b.82.2.1 (A:2-308) 1-aminocyclopropane-1-carboxyla 2e-29
d1dcsa_311 b.82.2.1 (A:) Deacetoxycephalosporin C synthase {S 2e-29
d1odma_329 b.82.2.1 (A:) Isopenicillin N synthase {Emericella 5e-25
>d1gp6a_ b.82.2.1 (A:) Anthocyanidin synthase {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 349 Back     information, alignment and structure

class: All beta proteins
fold: Double-stranded beta-helix
superfamily: Clavaminate synthase-like
family: Penicillin synthase-like
domain: Anthocyanidin synthase
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

 Score =  132 bits (333), Expect = 3e-37
 Identities = 68/264 (25%), Positives = 122/264 (46%), Gaps = 22/264 (8%)

Query: 38  LPTEFIWPNLEL-----------AQEELREPLIDLHGFLSGDERATAEAIDLVRGACVNH 86
           +P E+I P  EL            ++  + P IDL    S DE+     I+ ++ A ++ 
Sbjct: 17  IPKEYIRPKEELESINDVFLEEKKEDGPQVPTIDLKNIESDDEKIRENCIEELKKASLDW 76

Query: 87  GFFQVINHGVDASLLKAAIEETDSIFKLPLERK--LSIPIKTGLAKGYAGAHAGRFTTNL 144
           G   +INHG+ A L++   +  +  F L +E K   +    TG  +GY    A   +  L
Sbjct: 77  GVMHLINHGIPADLMERVKKAGEEFFSLSVEEKEKYANDQATGKIQGYGSKLANNASGQL 136

Query: 145 PWKETFTFNYHEKDAEPLFVDYFKSVFGQDFERKRWIYQKYCQAMWKLSGVLFELLAMSL 204
            W++ F    + ++   L      S++ +          +Y + +  L+  +F+ L++ L
Sbjct: 137 EWEDYFFHLAYPEEKRDL------SIWPKTPSDYIEATSEYAKCLRLLATKVFKALSVGL 190

Query: 205 GVDRKHYKKFF---EDGYSIVRFNFYPPCKNSALTLGTGPHYDPNSLTILHQEQVEGLEV 261
           G++    +K     E+    ++ N+YP C    L LG   H D ++LT +    V GL++
Sbjct: 191 GLEPDRLEKEVGGLEELLLQMKINYYPKCPQPELALGVEAHTDVSALTFILHNMVPGLQL 250

Query: 262 FSNNKWQTIRPRSDALVINIGDTF 285
           F   KW T +   D++V++IGDT 
Sbjct: 251 FYEGKWVTAKCVPDSIVMHIGDTL 274
>d1w9ya1 b.82.2.1 (A:2-308) 1-aminocyclopropane-1-carboxylate oxidase 1 {Petunia hybrida [TaxId: 4102]} Length = 307 Back     information, alignment and structure
>d1dcsa_ b.82.2.1 (A:) Deacetoxycephalosporin C synthase {Streptomyces clavuligerus [TaxId: 1901]} Length = 311 Back     information, alignment and structure
>d1odma_ b.82.2.1 (A:) Isopenicillin N synthase {Emericella nidulans [TaxId: 162425]} Length = 329 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query286
d1gp6a_349 Anthocyanidin synthase {Mouse-ear cress (Arabidops 100.0
d1w9ya1307 1-aminocyclopropane-1-carboxylate oxidase 1 {Petun 100.0
d1dcsa_311 Deacetoxycephalosporin C synthase {Streptomyces cl 100.0
d1odma_329 Isopenicillin N synthase {Emericella nidulans [Tax 100.0
>d1gp6a_ b.82.2.1 (A:) Anthocyanidin synthase {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Back     information, alignment and structure
class: All beta proteins
fold: Double-stranded beta-helix
superfamily: Clavaminate synthase-like
family: Penicillin synthase-like
domain: Anthocyanidin synthase
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=3.7e-61  Score=439.32  Aligned_cols=256  Identities=25%  Similarity=0.445  Sum_probs=221.9

Q ss_pred             eeehhhhhccCCCCCCCccCCCCcc-C----------cCCCCCceeeCCCCCCCCHHHHHHHHHHHHHHhhhccEEEEEe
Q 042504           25 IVFDYHKLQKQANLPTEFIWPNLEL-A----------QEELREPLIDLHGFLSGDERATAEAIDLVRGACVNHGFFQVIN   93 (286)
Q Consensus        25 ~~~~~~~~~~~~~iP~~~i~p~~~~-~----------~~~~~iPvIDl~~l~~~d~~~~~~~~~~l~~A~~~~GfF~v~n   93 (286)
                      ..|++|+++|+.+||++||+|+.++ .          ....+||||||+.|.+++++.|++++++|++||++||||||+|
T Consensus         4 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~IPvIDls~l~~~d~~~r~~~~~~l~~A~~~~GFf~l~n   83 (349)
T d1gp6a_           4 ERVESLAKSGIISIPKEYIRPKEELESINDVFLEEKKEDGPQVPTIDLKNIESDDEKIRENCIEELKKASLDWGVMHLIN   83 (349)
T ss_dssp             CCHHHHHHTTCSSCCGGGSCCHHHHTTCCCHHHHHHCCCSCCCCEEECTTTTCSCHHHHHHHHHHHHHHHHHTSEEEEES
T ss_pred             cchHHHHhCCCccCCHhhcCChhhcCCCCccccccccCCCCCcCeEEChhcCCCCHHHHHHHHHHHHHHHHhCCEEEEEc
Confidence            3589999999999999999999886 1          2456899999999999999999999999999999999999999


Q ss_pred             CCCCHHHHHHHHHHHHhhcCCCHHHHhcCCcCC--CCCCCccCCCCCccccCCCccccccccccCCCCccchhccccccC
Q 042504           94 HGVDASLLKAAIEETDSIFKLPLERKLSIPIKT--GLAKGYAGAHAGRFTTNLPWKETFTFNYHEKDAEPLFVDYFKSVF  171 (286)
Q Consensus        94 hGi~~~l~~~~~~~~~~FF~lp~eeK~~~~~~~--~~~~GY~~~~~~~~~~~~d~~E~~~~~~~p~~~~~~~~~wp~~~~  171 (286)
                      |||+.++++++++.+++||+||.|+|+|+....  +...||+........+..+|.+.+.....+.. ....+.||..  
T Consensus        84 HGI~~~li~~~~~~~~~FF~lP~eeK~k~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~n~wp~~--  160 (349)
T d1gp6a_          84 HGIPADLMERVKKAGEEFFSLSVEEKEKYANDQATGKIQGYGSKLANNASGQLEWEDYFFHLAYPEE-KRDLSIWPKT--  160 (349)
T ss_dssp             CSCCHHHHHHHHHHHHHHHTSCHHHHGGGBCBGGGTBCSEEECCCCCSTTCCCCSCEEEEEEEESGG-GCCGGGSCCS--
T ss_pred             cCCCHHHHHHHHHHHHHHHcCCHHHHhhhhcccccCCccccccccccccccccchhhhhcccccccc-cccccccccc--
Confidence            999999999999999999999999999997642  33556665555555566777776544322222 2335667654  


Q ss_pred             CcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhHHHHhhc---CCcceeEEeecCCCCCCCCCccccccccCCce
Q 042504          172 GQDFERKRWIYQKYCQAMWKLSGVLFELLAMSLGVDRKHYKKFFE---DGYSIVRFNFYPPCKNSALTLGTGPHYDPNSL  248 (286)
Q Consensus       172 ~~~~~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~~~~~~~---~~~~~lr~~~YP~~~~~~~~~g~~~HtD~~~l  248 (286)
                         .+.|++.+++|+++|.+|+.+|+++++++||+++++|.+.+.   ...+.||++|||+++.+...+|+++|||+|+|
T Consensus       161 ---~~~f~e~~~~~~~~~~~la~~ll~~la~~Lgl~~~~~~~~~~~~~~~~~~lrl~~Yp~~~~~~~~~g~~~HtD~g~l  237 (349)
T d1gp6a_         161 ---PSDYIEATSEYAKCLRLLATKVFKALSVGLGLEPDRLEKEVGGLEELLLQMKINYYPKCPQPELALGVEAHTDVSAL  237 (349)
T ss_dssp             ---STTHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCTTHHHHHTTHHHHCEEEEEEEEECCCSSTTTCCSEEEECCCSSE
T ss_pred             ---cchHHHHHHHHHHHHHHHHHhhhHHHHHHcCCCHHHHHHHhccccccceeeeecccccccchhhccccccCCCCcce
Confidence               478999999999999999999999999999999999998874   45678999999999998889999999999999


Q ss_pred             EEEecCCCCceEEEeCCeEEEeccCCCcEEEecCCCCC
Q 042504          249 TILHQEQVEGLEVFSNNKWQTIRPRSDALVINIGDTFV  286 (286)
Q Consensus       249 TlL~qd~v~GLqV~~~g~W~~V~p~pg~~vVNiGD~lq  286 (286)
                      |||+|+.++||||+++|+|++|+|.+|++|||+||+||
T Consensus       238 TlL~q~~~~GLqv~~~g~W~~V~p~~~a~vVNvGD~l~  275 (349)
T d1gp6a_         238 TFILHNMVPGLQLFYEGKWVTAKCVPDSIVMHIGDTLE  275 (349)
T ss_dssp             EEEEECSCCCEEEEETTEEEECCCCTTCEEEEECHHHH
T ss_pred             EEEeccCCcceeeecCCceEEccCCCCCeeeeHHhHHH
Confidence            99999999999999999999999999999999999985
>d1w9ya1 b.82.2.1 (A:2-308) 1-aminocyclopropane-1-carboxylate oxidase 1 {Petunia hybrida [TaxId: 4102]} Back     information, alignment and structure
>d1dcsa_ b.82.2.1 (A:) Deacetoxycephalosporin C synthase {Streptomyces clavuligerus [TaxId: 1901]} Back     information, alignment and structure
>d1odma_ b.82.2.1 (A:) Isopenicillin N synthase {Emericella nidulans [TaxId: 162425]} Back     information, alignment and structure