Citrus Sinensis ID: 042515
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 342 | ||||||
| 225423891 | 345 | PREDICTED: probable galacturonosyltransf | 0.973 | 0.965 | 0.791 | 1e-158 | |
| 224108539 | 342 | glycosyltransferase, CAZy family GT8 [Po | 0.991 | 0.991 | 0.766 | 1e-155 | |
| 224101685 | 346 | glycosyltransferase, CAZy family GT8 [Po | 0.973 | 0.962 | 0.766 | 1e-154 | |
| 356495990 | 338 | PREDICTED: probable galacturonosyltransf | 0.950 | 0.961 | 0.792 | 1e-153 | |
| 356499719 | 342 | PREDICTED: probable galacturonosyltransf | 0.941 | 0.941 | 0.797 | 1e-152 | |
| 357464109 | 343 | Glycosyltransferase CAZy family GT8 [Med | 0.941 | 0.938 | 0.772 | 1e-149 | |
| 255566847 | 344 | transferase, transferring glycosyl group | 0.906 | 0.901 | 0.786 | 1e-147 | |
| 449493504 | 405 | PREDICTED: probable galacturonosyltransf | 0.932 | 0.787 | 0.764 | 1e-144 | |
| 449434660 | 333 | PREDICTED: probable galacturonosyltransf | 0.932 | 0.957 | 0.764 | 1e-144 | |
| 297849708 | 345 | hypothetical protein ARALYDRAFT_471480 [ | 0.932 | 0.924 | 0.790 | 1e-144 |
| >gi|225423891|ref|XP_002281658.1| PREDICTED: probable galacturonosyltransferase-like 3 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 563 bits (1451), Expect = e-158, Method: Compositional matrix adjust.
Identities = 266/336 (79%), Positives = 298/336 (88%), Gaps = 3/336 (0%)
Query: 9 LLIFFTIIFPAI--SGELPRFREAPAFRNGRECPKATWSALDRRSHNPSIIHISMTLDST 66
L++ + FPA SG+LP F EAPAFRNG ECP+ TWS+L + S+NPSIIHI+MTLD+T
Sbjct: 11 LILSIAVHFPATVTSGDLPSFSEAPAFRNGEECPRTTWSSLPKGSYNPSIIHIAMTLDAT 70
Query: 67 YLRGSVAGVFSVLQHATCPENIVFHFISTQRQRLELSRTITATFPYLNFEIYRFDTNLVK 126
YLRGS+AGV SVLQHA+CPENIVFHF+++ R R EL R I TFPYL+F +Y FDTNLVK
Sbjct: 71 YLRGSIAGVLSVLQHASCPENIVFHFLASHR-RAELRRIIVTTFPYLSFHLYHFDTNLVK 129
Query: 127 GKISYSIRQALDQPLNYARIYLADLLPLTVGRIIYFDSDLIVVDDVAKLWSINLRGRVLG 186
GKIS SIR+ALDQPLNYARIYLADLLP V RIIYFDSDLIVVDDVAKLW INL VLG
Sbjct: 130 GKISSSIRRALDQPLNYARIYLADLLPGGVRRIIYFDSDLIVVDDVAKLWEINLGPHVLG 189
Query: 187 APEYCHANFTNYFTSKFWSNPVFSGTVKGRRPCYFNTGVMVIDLRKWREGRYTEKLEYWM 246
APEYCHANFTNYFT+KFWSNP F+ + +GR+PCYFNTGVMVIDL +WREG++TE+LE WM
Sbjct: 190 APEYCHANFTNYFTAKFWSNPAFTTSFRGRKPCYFNTGVMVIDLWRWREGKFTERLETWM 249
Query: 247 RVQKKYRIYELGSLPPFLLVFAGDVEGVEHRWNQHGLGGDNLEGLCRNLHPGPVSLLHWS 306
R+QK+YRIY+LGSLPPFLLVFAGDVEGVEHRWNQHGLGGDNLEGLCRNLHPGPVSLLHWS
Sbjct: 250 RIQKRYRIYQLGSLPPFLLVFAGDVEGVEHRWNQHGLGGDNLEGLCRNLHPGPVSLLHWS 309
Query: 307 GKGKPWLRIDSKKPCPLDSLWAPYDLFRHKSLFSDS 342
GKGKPWLR+DSK+PCPLDSLWAPYDLFRH SL SDS
Sbjct: 310 GKGKPWLRLDSKRPCPLDSLWAPYDLFRHASLISDS 345
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Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224108539|ref|XP_002314884.1| glycosyltransferase, CAZy family GT8 [Populus trichocarpa] gi|222863924|gb|EEF01055.1| glycosyltransferase, CAZy family GT8 [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
| >gi|224101685|ref|XP_002312381.1| glycosyltransferase, CAZy family GT8 [Populus trichocarpa] gi|222852201|gb|EEE89748.1| glycosyltransferase, CAZy family GT8 [Populus trichocarpa] | Back alignment and taxonomy information |
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| >gi|356495990|ref|XP_003516853.1| PREDICTED: probable galacturonosyltransferase-like 3-like [Glycine max] | Back alignment and taxonomy information |
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| >gi|356499719|ref|XP_003518684.1| PREDICTED: probable galacturonosyltransferase-like 3-like [Glycine max] | Back alignment and taxonomy information |
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| >gi|357464109|ref|XP_003602336.1| Glycosyltransferase CAZy family GT8 [Medicago truncatula] gi|355491384|gb|AES72587.1| Glycosyltransferase CAZy family GT8 [Medicago truncatula] | Back alignment and taxonomy information |
|---|
| >gi|255566847|ref|XP_002524407.1| transferase, transferring glycosyl groups, putative [Ricinus communis] gi|223536368|gb|EEF38018.1| transferase, transferring glycosyl groups, putative [Ricinus communis] | Back alignment and taxonomy information |
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| >gi|449493504|ref|XP_004159321.1| PREDICTED: probable galacturonosyltransferase-like 3-like [Cucumis sativus] | Back alignment and taxonomy information |
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| >gi|449434660|ref|XP_004135114.1| PREDICTED: probable galacturonosyltransferase-like 3-like [Cucumis sativus] | Back alignment and taxonomy information |
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| >gi|297849708|ref|XP_002892735.1| hypothetical protein ARALYDRAFT_471480 [Arabidopsis lyrata subsp. lyrata] gi|297338577|gb|EFH68994.1| hypothetical protein ARALYDRAFT_471480 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 342 | ||||||
| TAIR|locus:2205314 | 345 | GATL3 "galacturonosyltransfera | 0.997 | 0.988 | 0.746 | 3.7e-142 | |
| TAIR|locus:2082450 | 351 | GATL4 "galacturonosyltransfera | 0.880 | 0.857 | 0.668 | 1.6e-118 | |
| TAIR|locus:2032357 | 393 | LGT9 [Arabidopsis thaliana (ta | 0.918 | 0.798 | 0.619 | 5.2e-113 | |
| TAIR|locus:2132218 | 346 | GATL6 "galacturonosyltransfera | 0.903 | 0.893 | 0.623 | 3.6e-112 | |
| TAIR|locus:2020638 | 390 | LGT8 "glucosyl transferase fam | 0.918 | 0.805 | 0.617 | 6.8e-111 | |
| TAIR|locus:2081670 | 361 | GATL7 "galacturonosyltransfera | 0.891 | 0.844 | 0.620 | 1e-109 | |
| TAIR|locus:2024740 | 361 | GATL5 "galacturonosyltransfera | 0.915 | 0.867 | 0.615 | 7e-109 | |
| TAIR|locus:2095420 | 365 | GATL10 "galacturonosyltransfer | 0.944 | 0.884 | 0.582 | 1e-107 | |
| TAIR|locus:2016432 | 351 | PARVUS "AT1G19300" [Arabidopsi | 0.953 | 0.928 | 0.598 | 1.2e-106 | |
| TAIR|locus:2101724 | 341 | GATL2 "galacturonosyltransfera | 0.938 | 0.941 | 0.599 | 4e-106 |
| TAIR|locus:2205314 GATL3 "galacturonosyltransferase-like 3" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1390 (494.4 bits), Expect = 3.7e-142, P = 3.7e-142
Identities = 256/343 (74%), Positives = 290/343 (84%)
Query: 1 MRLKFESRLLIFFTIIFPAIS-GELPRFREAPAFRNGRECPKATWSALDRRSHNPSIIHI 59
+RL+ LL+ TI ++ +LP FREAPAFRNGREC K TW D HNPSIIHI
Sbjct: 4 LRLRLCLLLLLPITISCVTVTLTDLPAFREAPAFRNGRECSKTTWIPSDHE-HNPSIIHI 62
Query: 60 SMTLDSTYLRGSVAGVFSVLQHATCPENIVFHFISTQRQRLELSRTITATFPYLNFEIYR 119
+MTLD+ YLRGSVAGVFSVLQHA+CPENIVFHFI+T R+ +L R I++TFPYL + IY
Sbjct: 63 AMTLDAIYLRGSVAGVFSVLQHASCPENIVFHFIATHRRSADLRRIISSTFPYLTYHIYH 122
Query: 120 FDTNLVKGKISYSIRQALDQPLNYARIYLADLLPLTVGRIIYFDSDLIVVDDVAKLWSIN 179
FD NLV+ KIS SIR+ALDQPLNYARIYLADLLP+ V R+IYFDSDL+VVDDVAKLW I+
Sbjct: 123 FDPNLVRSKISSSIRRALDQPLNYARIYLADLLPIAVRRVIYFDSDLVVVDDVAKLWRID 182
Query: 180 LRGRVLGAPEYCHANFTNYFTSKFWSNPVFSGTVKGRRPCYFNTGVMVIDLRKWREGRYT 239
LR V+GAPEYCHANFTNYFTS+FWS+ + +K R+PCYFNTGVMVIDL KWRE R T
Sbjct: 183 LRRHVVGAPEYCHANFTNYFTSRFWSSQGYKSALKDRKPCYFNTGVMVIDLGKWRERRVT 242
Query: 240 EKLEYWMRVQKKYRIYELGSLPPFLLVFAGDVEGVEHRWNQHGLGGDNLEGLCRNLHPGP 299
KLE WMR+QK++RIYELGSLPPFLLVFAGDVE VEHRWNQHGLGGDNLEGLCRNLHPGP
Sbjct: 243 VKLETWMRIQKRHRIYELGSLPPFLLVFAGDVEPVEHRWNQHGLGGDNLEGLCRNLHPGP 302
Query: 300 VSLLHWSGKGKPWLRIDSKKPCPLDSLWAPYDLFRHKSLFSDS 342
VSLLHWSGKGKPWLR+DS++PCPLDSLWAPYDLFR+ L SDS
Sbjct: 303 VSLLHWSGKGKPWLRLDSRRPCPLDSLWAPYDLFRYSPLISDS 345
|
|
| TAIR|locus:2082450 GATL4 "galacturonosyltransferase-like 4" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2032357 LGT9 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2132218 GATL6 "galacturonosyltransferase 6" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2020638 LGT8 "glucosyl transferase family 8" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2081670 GATL7 "galacturonosyltransferase-like 7" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2024740 GATL5 "galacturonosyltransferase 5" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2095420 GATL10 "galacturonosyltransferase-like 10" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2016432 PARVUS "AT1G19300" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2101724 GATL2 "galacturonosyltransferase-like 2" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 342 | |||
| pfam01501 | 248 | pfam01501, Glyco_transf_8, Glycosyl transferase fa | 1e-63 | |
| cd06429 | 257 | cd06429, GT8_like_1, GT8_like_1 represents a subfa | 2e-34 | |
| PLN02867 | 535 | PLN02867, PLN02867, Probable galacturonosyltransfe | 4e-26 | |
| cd04194 | 248 | cd04194, GT8_A4GalT_like, A4GalT_like proteins cat | 6e-25 | |
| PLN02870 | 533 | PLN02870, PLN02870, Probable galacturonosyltransfe | 5e-24 | |
| cd00505 | 246 | cd00505, Glyco_transf_8, Members of glycosyltransf | 4e-23 | |
| PLN02742 | 534 | PLN02742, PLN02742, Probable galacturonosyltransfe | 5e-23 | |
| PLN02829 | 639 | PLN02829, PLN02829, Probable galacturonosyltransfe | 2e-22 | |
| PLN02523 | 559 | PLN02523, PLN02523, galacturonosyltransferase | 5e-22 | |
| PLN02659 | 534 | PLN02659, PLN02659, Probable galacturonosyltransfe | 5e-22 | |
| PLN02718 | 603 | PLN02718, PLN02718, Probable galacturonosyltransfe | 6e-22 | |
| PLN02910 | 657 | PLN02910, PLN02910, polygalacturonate 4-alpha-gala | 2e-21 | |
| COG1442 | 325 | COG1442, RfaJ, Lipopolysaccharide biosynthesis pro | 5e-16 | |
| PLN02769 | 629 | PLN02769, PLN02769, Probable galacturonosyltransfe | 6e-15 | |
| cd06431 | 280 | cd06431, GT8_LARGE_C, LARGE catalytic domain has c | 3e-09 | |
| cd06432 | 248 | cd06432, GT8_HUGT1_C_like, The C-terminal domain o | 3e-08 |
| >gnl|CDD|216536 pfam01501, Glyco_transf_8, Glycosyl transferase family 8 | Back alignment and domain information |
|---|
Score = 201 bits (514), Expect = 1e-63
Identities = 78/260 (30%), Positives = 123/260 (47%), Gaps = 13/260 (5%)
Query: 58 HISMTLDSTYLRGSVAGVFSVLQHATCPENIVFHFISTQRQRLELSRTITATFPYLNFE- 116
I + LD Y+ G+ + S+L H + P +++FH ++ + +
Sbjct: 1 VIVLALDDNYVLGAGVLIKSLLLHNSDPLHLLFHILTDDVSEENREKLNALGSQVSEVDV 60
Query: 117 IYRFDTNLVKGKISYSIRQALDQPLNYARIYLADLLPLTVGRIIYFDSDLIVVDDVAKLW 176
+ D ++ + + LNYAR+YLADL P +I+Y D+D+IV+ D+ +L+
Sbjct: 61 LEFSDIEMLSYLTLQLLLKKYWSLLNYARLYLADLFP-KYDKILYLDADIIVLGDLDELF 119
Query: 177 SINLRGRVLGAPEYCHANFTNYFTSKFWSNPVFSGTVKGRRPCYFNTGVMVIDLRKWREG 236
I+L G+V A E W S + PCYFN GV+VI+L+KWRE
Sbjct: 120 DIDLGGKVAAAVEDF--------DRYPWFKEALSAELGIPPPCYFNAGVLVINLKKWREE 171
Query: 237 RYTEKLEYWMRVQKKYRIYELGSLPPFLLVFAGDVEGVEHRWNQHGLGGDNLEGLCRNLH 296
TEKL W+ + +LG +VF G V+ + R+N HGLG + R L
Sbjct: 172 NLTEKLIEWLNKNG--GLLKLGDQDILNIVFKGKVKPLPPRYNVHGLGYYS-YKKRRKLI 228
Query: 297 PGPVSLLHWSGKGKPWLRID 316
P ++H+ G KPW +
Sbjct: 229 PENPKVIHYIGPTKPWHDLA 248
|
This family includes enzymes that transfer sugar residues to donor molecules. Members of this family are involved in lipopolysaccharide biosynthesis and glycogen synthesis. This family includes Lipopolysaccharide galactosyltransferase, lipopolysaccharide glucosyltransferase 1, and glycogenin glucosyltransferase. Length = 248 |
| >gnl|CDD|133051 cd06429, GT8_like_1, GT8_like_1 represents a subfamily of GT8 with unknown function | Back alignment and domain information |
|---|
| >gnl|CDD|178458 PLN02867, PLN02867, Probable galacturonosyltransferase | Back alignment and domain information |
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| >gnl|CDD|133037 cd04194, GT8_A4GalT_like, A4GalT_like proteins catalyze the addition of galactose or glucose residues to the lipooligosaccharide (LOS) or lipopolysaccharide (LPS) of the bacterial cell surface | Back alignment and domain information |
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| >gnl|CDD|215468 PLN02870, PLN02870, Probable galacturonosyltransferase | Back alignment and domain information |
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| >gnl|CDD|132996 cd00505, Glyco_transf_8, Members of glycosyltransferase family 8 (GT-8) are involved in lipopolysaccharide biosynthesis and glycogen synthesis | Back alignment and domain information |
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| >gnl|CDD|215395 PLN02742, PLN02742, Probable galacturonosyltransferase | Back alignment and domain information |
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| >gnl|CDD|215443 PLN02829, PLN02829, Probable galacturonosyltransferase | Back alignment and domain information |
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| >gnl|CDD|215286 PLN02523, PLN02523, galacturonosyltransferase | Back alignment and domain information |
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| >gnl|CDD|215356 PLN02659, PLN02659, Probable galacturonosyltransferase | Back alignment and domain information |
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| >gnl|CDD|178320 PLN02718, PLN02718, Probable galacturonosyltransferase | Back alignment and domain information |
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| >gnl|CDD|215493 PLN02910, PLN02910, polygalacturonate 4-alpha-galacturonosyltransferase | Back alignment and domain information |
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| >gnl|CDD|224359 COG1442, RfaJ, Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
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| >gnl|CDD|215412 PLN02769, PLN02769, Probable galacturonosyltransferase | Back alignment and domain information |
|---|
| >gnl|CDD|133053 cd06431, GT8_LARGE_C, LARGE catalytic domain has closest homology to GT8 glycosyltransferase involved in lipooligosaccharide synthesis | Back alignment and domain information |
|---|
| >gnl|CDD|133054 cd06432, GT8_HUGT1_C_like, The C-terminal domain of HUGT1-like is highly homologous to the GT 8 family | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 342 | |||
| cd06429 | 257 | GT8_like_1 GT8_like_1 represents a subfamily of GT | 100.0 | |
| PRK15171 | 334 | lipopolysaccharide 1,3-galactosyltransferase; Prov | 100.0 | |
| PLN02718 | 603 | Probable galacturonosyltransferase | 100.0 | |
| PLN02742 | 534 | Probable galacturonosyltransferase | 100.0 | |
| PLN02829 | 639 | Probable galacturonosyltransferase | 100.0 | |
| PLN02523 | 559 | galacturonosyltransferase | 100.0 | |
| PLN02910 | 657 | polygalacturonate 4-alpha-galacturonosyltransferas | 100.0 | |
| cd06431 | 280 | GT8_LARGE_C LARGE catalytic domain has closest hom | 100.0 | |
| PLN02870 | 533 | Probable galacturonosyltransferase | 100.0 | |
| PLN02769 | 629 | Probable galacturonosyltransferase | 100.0 | |
| PLN02659 | 534 | Probable galacturonosyltransferase | 100.0 | |
| cd00505 | 246 | Glyco_transf_8 Members of glycosyltransferase fami | 100.0 | |
| PLN02867 | 535 | Probable galacturonosyltransferase | 100.0 | |
| COG1442 | 325 | RfaJ Lipopolysaccharide biosynthesis proteins, LPS | 100.0 | |
| cd04194 | 248 | GT8_A4GalT_like A4GalT_like proteins catalyze the | 100.0 | |
| PF01501 | 250 | Glyco_transf_8: Glycosyl transferase family 8; Int | 100.0 | |
| cd06430 | 304 | GT8_like_2 GT8_like_2 represents a subfamily of GT | 100.0 | |
| cd06432 | 248 | GT8_HUGT1_C_like The C-terminal domain of HUGT1-li | 100.0 | |
| PLN00176 | 333 | galactinol synthase | 99.97 | |
| cd02537 | 240 | GT8_Glycogenin Glycogenin belongs the GT 8 family | 99.97 | |
| cd06914 | 278 | GT8_GNT1 GNT1 is a fungal enzyme that belongs to t | 99.92 | |
| KOG1879 | 1470 | consensus UDP-glucose:glycoprotein glucosyltransfe | 99.52 | |
| COG5597 | 368 | Alpha-N-acetylglucosamine transferase [Cell envelo | 98.9 | |
| PF03407 | 212 | Nucleotid_trans: Nucleotide-diphospho-sugar transf | 97.31 | |
| PF11051 | 271 | Mannosyl_trans3: Mannosyltransferase putative; Int | 97.11 | |
| PLN03182 | 429 | xyloglucan 6-xylosyltransferase; Provisional | 96.03 | |
| KOG1950 | 369 | consensus Glycosyl transferase, family 8 - glycoge | 90.23 | |
| PF05637 | 239 | Glyco_transf_34: galactosyl transferase GMA12/MNN1 | 89.97 | |
| cd02515 | 271 | Glyco_transf_6 Glycosyltransferase family 6 compri | 87.24 | |
| PLN03181 | 453 | glycosyltransferase; Provisional | 82.7 | |
| PF04765 | 305 | DUF616: Protein of unknown function (DUF616); Inte | 81.28 |
| >cd06429 GT8_like_1 GT8_like_1 represents a subfamily of GT8 with unknown function | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.4e-51 Score=374.09 Aligned_cols=237 Identities=30% Similarity=0.576 Sum_probs=195.1
Q ss_pred ceEEEEeCcchhhchHHHHHHHHHhcCCCCCEEEEEEecCcCHHHHHHHHHhh-CCCccEEEEEecCccccCccchh---
Q 042515 57 IHISMTLDSTYLRGSVAGVFSVLQHATCPENIVFHFISTQRQRLELSRTITAT-FPYLNFEIYRFDTNLVKGKISYS--- 132 (342)
Q Consensus 57 i~I~~~~D~~yl~~~~v~i~Sll~~~~~~~~i~fhil~~~~s~~~l~~~l~~~-~p~~~~~~~~~d~~~~~~~i~~~--- 132 (342)
+|||+++| ||+ ++++++.|++.|+++|++++|||++++.+.+.+++..... ..+.+++++.++...+.+.....
T Consensus 1 ~hiv~~~D-n~l-~~~v~i~S~l~nn~~~~~~~fhvvtd~~s~~~~~~~~~~~~~~~~~i~~~~i~~~~~~~~~~~~~~~ 78 (257)
T cd06429 1 IHVVIFSD-NRL-AAAVVINSSISNNKDPSNLVFHIVTDNQNYGAMRSWFDLNPLKIATVKVLNFDDFKLLGKVKVDSLM 78 (257)
T ss_pred CCEEEEec-chh-HHHHHHHHHHHhCCCCCceEEEEecCccCHHHHHHHHHhcCCCCceEEEEEeCcHHhhcccccchhh
Confidence 69999999 999 5788889999999887899999999999987777665432 23678999999866554332211
Q ss_pred -------------hhhhhcCcchhHHHhhhhhcccccCcEEEEecceEEecchHHHHccccCCCeEEeecccccCccccc
Q 042515 133 -------------IRQALDQPLNYARIYLADLLPLTVGRIIYFDSDLIVVDDVAKLWSINLRGRVLGAPEYCHANFTNYF 199 (342)
Q Consensus 133 -------------~~~~~~~~~~y~Rl~l~~llp~~vdRvIYLDsDiiV~~Di~~L~~~dl~~~~iaA~~d~~~~~~~~~ 199 (342)
.+.++.++++|+||++|++|| +++||||||+|+||++||++||++|++|+++||++|
T Consensus 79 ~~~~~~~~~~~~~~~~~~~s~~~y~Rl~ip~llp-~~~kvlYLD~Dviv~~dl~eL~~~dl~~~~~aav~d--------- 148 (257)
T cd06429 79 QLESEADTSNLKQRKPEYISLLNFARFYLPELFP-KLEKVIYLDDDVVVQKDLTELWNTDLGGGVAGAVET--------- 148 (257)
T ss_pred hhhccccccccccCCccccCHHHHHHHHHHHHhh-hhCeEEEEeCCEEEeCCHHHHhhCCCCCCEEEEEhh---------
Confidence 133567889999999999999 599999999999999999999999999999999853
Q ss_pred CccCCCCccccCCCCCCCCccceeeEEEEehhHHhhccHHHHHHHHHHHhccc--ccccCCCcchhhhhhcCceEecCcc
Q 042515 200 TSKFWSNPVFSGTVKGRRPCYFNTGVMVIDLRKWREGRYTEKLEYWMRVQKKY--RIYELGSLPPFLLVFAGDVEGVEHR 277 (342)
Q Consensus 200 ~~~~w~~~~~~~~~~~~~~~yFNsGVmlinL~~wR~~~~~~~~~~~~~~~~~~--~~~~~~DQd~lN~vf~~~i~~L~~~ 277 (342)
||||||||||+++||+.++++++++|++...+. ..+.++|||++|++|.|+++.||++
T Consensus 149 --------------------yfNsGV~linl~~wr~~~i~~~~~~~~~~~~~~~~~~~~~~dqd~ln~~~~~~~~~L~~~ 208 (257)
T cd06429 149 --------------------SWNPGVNVVNLTEWRRQNVTETYEKWMELNQEEEVTLWKLITLPPGLIVFYGLTSPLDPS 208 (257)
T ss_pred --------------------hcccceEEEeHHHHHhccHHHHHHHHHHHhhhcccchhhcCCccHHHHHccCeeEECChH
Confidence 899999999999999999999999999865432 3467789999999999999999999
Q ss_pred ccccCCCCCccccccccCCCCCcEEEeccCCCCCCccCCCCCCCCccccccccc
Q 042515 278 WNQHGLGGDNLEGLCRNLHPGPVSLLHWSGKGKPWLRIDSKKPCPLDSLWAPYD 331 (342)
Q Consensus 278 wN~~~~~~~~~~~~~~~~~~~~~~IiHy~g~~KPW~~~~~~~~~~~~~lW~~Y~ 331 (342)
||+++++++.... .. ...+++||||+|+.|||+..+. .+++++||.|.
T Consensus 209 wN~~~l~~~~~~~--~~-~~~~~~IIHy~G~~KPW~~~~~---~~~~~~w~~yl 256 (257)
T cd06429 209 WHVRGLGYNYGIR--PQ-DIKAAAVLHFNGNMKPWLRTAI---PSYKELWEKYL 256 (257)
T ss_pred HcccCCccccccc--cc-ccCCcEEEEECCCCCCcCCCCC---ChHHHHHHHHh
Confidence 9998776543211 11 1247799999999999998754 25899999984
|
A subfamily of glycosyltransferase family 8 with unknown function: Glycosyltransferase family 8 comprises enzymes with a number of known activities; lipopolysaccharide galactosyltransferase lipopolysaccharide glucosyltransferase 1, glycogenin glucosyltransferase and inositol 1-alpha-galactosyltransferase. It is classified as a retaining glycosyltransferase, based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed. |
| >PRK15171 lipopolysaccharide 1,3-galactosyltransferase; Provisional | Back alignment and domain information |
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| >PLN02718 Probable galacturonosyltransferase | Back alignment and domain information |
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| >PLN02742 Probable galacturonosyltransferase | Back alignment and domain information |
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| >PLN02829 Probable galacturonosyltransferase | Back alignment and domain information |
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| >PLN02523 galacturonosyltransferase | Back alignment and domain information |
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| >PLN02910 polygalacturonate 4-alpha-galacturonosyltransferase | Back alignment and domain information |
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| >cd06431 GT8_LARGE_C LARGE catalytic domain has closest homology to GT8 glycosyltransferase involved in lipooligosaccharide synthesis | Back alignment and domain information |
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| >PLN02870 Probable galacturonosyltransferase | Back alignment and domain information |
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| >PLN02769 Probable galacturonosyltransferase | Back alignment and domain information |
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| >PLN02659 Probable galacturonosyltransferase | Back alignment and domain information |
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| >cd00505 Glyco_transf_8 Members of glycosyltransferase family 8 (GT-8) are involved in lipopolysaccharide biosynthesis and glycogen synthesis | Back alignment and domain information |
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| >PLN02867 Probable galacturonosyltransferase | Back alignment and domain information |
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| >COG1442 RfaJ Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
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| >cd04194 GT8_A4GalT_like A4GalT_like proteins catalyze the addition of galactose or glucose residues to the lipooligosaccharide (LOS) or lipopolysaccharide (LPS) of the bacterial cell surface | Back alignment and domain information |
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| >PF01501 Glyco_transf_8: Glycosyl transferase family 8; InterPro: IPR002495 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
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| >cd06430 GT8_like_2 GT8_like_2 represents a subfamily of GT8 with unknown function | Back alignment and domain information |
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| >cd06432 GT8_HUGT1_C_like The C-terminal domain of HUGT1-like is highly homologous to the GT 8 family | Back alignment and domain information |
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| >PLN00176 galactinol synthase | Back alignment and domain information |
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| >cd02537 GT8_Glycogenin Glycogenin belongs the GT 8 family and initiates the biosynthesis of glycogen | Back alignment and domain information |
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| >cd06914 GT8_GNT1 GNT1 is a fungal enzyme that belongs to the GT 8 family | Back alignment and domain information |
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| >KOG1879 consensus UDP-glucose:glycoprotein glucosyltransferase [Carbohydrate transport and metabolism] | Back alignment and domain information |
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| >COG5597 Alpha-N-acetylglucosamine transferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
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| >PF03407 Nucleotid_trans: Nucleotide-diphospho-sugar transferase; InterPro: IPR005069 Proteins in this family have been been predicted to be nucleotide-diphospho-sugar transferases [] | Back alignment and domain information |
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| >PF11051 Mannosyl_trans3: Mannosyltransferase putative; InterPro: IPR022751 Alpha-mannosyltransferase is responsible for the addition of residues to the outer chain of core N-linked polysaccharides and to O-linked mannotriose | Back alignment and domain information |
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| >PLN03182 xyloglucan 6-xylosyltransferase; Provisional | Back alignment and domain information |
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| >KOG1950 consensus Glycosyl transferase, family 8 - glycogenin [Carbohydrate transport and metabolism] | Back alignment and domain information |
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| >PF05637 Glyco_transf_34: galactosyl transferase GMA12/MNN10 family; InterPro: IPR008630 This family contains a number of glycosyltransferase enzymes that contain a DXD motif | Back alignment and domain information |
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| >cd02515 Glyco_transf_6 Glycosyltransferase family 6 comprises enzymes responsible for the production of the human ABO blood group antigens | Back alignment and domain information |
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| >PLN03181 glycosyltransferase; Provisional | Back alignment and domain information |
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| >PF04765 DUF616: Protein of unknown function (DUF616); InterPro: IPR006852 The entry represents a protein of unknown function | Back alignment and domain information |
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Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 342 | ||||
| 1g9r_A | 311 | Crystal Structure Of Galactosyltransferase Lgtc In | 4e-06 | ||
| 1ss9_A | 311 | Crystal Structural Analysis Of Active Site Mutant Q | 1e-05 |
| >pdb|1G9R|A Chain A, Crystal Structure Of Galactosyltransferase Lgtc In Complex With Mn And Udp-2f-Galactose Length = 311 | Back alignment and structure |
|
| >pdb|1SS9|A Chain A, Crystal Structural Analysis Of Active Site Mutant Q189e Of Lgtc Length = 311 | Back alignment and structure |
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 342 | |||
| 1g9r_A | 311 | Glycosyl transferase; alpha-beta structure; HET: U | 6e-59 | |
| 3tzt_A | 276 | Glycosyl transferase family 8; structural genomics | 2e-44 |
| >1g9r_A Glycosyl transferase; alpha-beta structure; HET: UPF; 2.00A {Neisseria meningitidis} SCOP: c.68.1.4 PDB: 1ga8_A* 1ss9_A* Length = 311 | Back alignment and structure |
|---|
Score = 191 bits (487), Expect = 6e-59
Identities = 54/288 (18%), Positives = 90/288 (31%), Gaps = 35/288 (12%)
Query: 57 IHISMTLDSTYLRGSVAGVFSVLQHATCPENIVFHFISTQRQRLELSRTITATFPYLNFE 116
+ I D Y SV I FH + + A
Sbjct: 1 MDIVFAADDNYAAYLCVAAKSVEAAHP-DTEIRFHVL-DAGISEANRAAVAANLRGGGGN 58
Query: 117 I--YRFDTNLVKGKISYSIRQALDQPLNYARIYLADLLPLTVGRIIYFDSDLIVVDDVAK 174
I + G + + YAR+ L + + +++Y D D++V D +
Sbjct: 59 IRFIDVNPEDFAG---FPLNIRHISITTYARLKLGEYIA-DCDKVLYLDIDVLVRDSLTP 114
Query: 175 LWSINLRGRVLGA-PEYCHANFTNYFTSKFWSNPVFSGTVKGRRPCYFNTGVMVIDLRKW 233
LW +L LGA + Y ++ YFN GV++I+L+KW
Sbjct: 115 LWDTDLGDNWLGASIDLFVERQEGYKQKIGMADG----------EYYFNAGVLLINLKKW 164
Query: 234 REGRYTEKLEYWMRVQKKYRIYELGSLPPFLLVFAGDVEGVEHRWNQHGLGGDNLEGLCR 293
R + W+ K Y+ + +F G V R+N +
Sbjct: 165 RRHDIFKMSSEWVEQYKDVMQYQDQDILNG--LFKGGVCYANSRFNFMPTNYAFMANWFA 222
Query: 294 NLHPGP-----------VSLLHWSGKGKPWLRIDSKKPCPLDSLWAPY 330
+ H P V++ H+ G KPW R + +
Sbjct: 223 SRHTDPLYRDRTNTVMPVAVSHYCGPAKPWHRDCTA---WGAERFTEL 267
|
| >3tzt_A Glycosyl transferase family 8; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, putative glycosyl transferase; HET: MSE CIT; 2.10A {Anaerococcus prevotii} Length = 276 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 342 | |||
| 3tzt_A | 276 | Glycosyl transferase family 8; structural genomics | 100.0 | |
| 1g9r_A | 311 | Glycosyl transferase; alpha-beta structure; HET: U | 100.0 | |
| 1ll2_A | 333 | Glycogenin-1; protein-substrate complex, beta-alph | 99.97 | |
| 3u2u_A | 263 | Glycogenin-1, GN-1, GN1; structural genomics, stru | 99.96 |
| >3tzt_A Glycosyl transferase family 8; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, putative glycosyl transferase; HET: MSE CIT; 2.10A {Anaerococcus prevotii} SCOP: c.68.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-49 Score=368.67 Aligned_cols=261 Identities=17% Similarity=0.251 Sum_probs=183.1
Q ss_pred CcceEEEEeCcchhhchHHHHHHHHHhcCCCCCEEEEEEecCcCHHHHHHHHHhh--CCCccEEEEEecCccccCccchh
Q 042515 55 SIIHISMTLDSTYLRGSVAGVFSVLQHATCPENIVFHFISTQRQRLELSRTITAT--FPYLNFEIYRFDTNLVKGKISYS 132 (342)
Q Consensus 55 ~~i~I~~~~D~~yl~~~~v~i~Sll~~~~~~~~i~fhil~~~~s~~~l~~~l~~~--~p~~~~~~~~~d~~~~~~~i~~~ 132 (342)
-.|||++|+|++|+++++|+++||++|+++ ++++|||++++++++..+ .|++. ..+.+++++.++.+.+.+...
T Consensus 4 m~i~I~~~~d~~Y~~~~~v~i~Sl~~~~~~-~~~~~~il~~~is~~~~~-~L~~~~~~~~~~i~~~~~~~~~~~~~~~-- 79 (276)
T 3tzt_A 4 MADALLLTLDENYIPQMKVLMTSIYINNPG-RIFDVYLIHSRISEDKLK-DLGEDLKKFSYTLYPIRATDDLFSFAKV-- 79 (276)
T ss_dssp -CEEEEEECCGGGHHHHHHHHHHHHHHSTT-CCEEEEEEESCCCHHHHH-HHHHHHHTTTCEEEEEECC-----------
T ss_pred eeEEEEEEeCHhHHHHHHHHHHHHHHhCCC-CceEEEEEeCCCCHHHHH-HHHHHHHHcCCEEEEEEeCHHHHhcCcc--
Confidence 469999999999999999999999999985 689999999999876532 33322 124577888887655544221
Q ss_pred hhhhhcCcchhHHHhhhhhcccccCcEEEEecceEEecchHHHHccccCCCeEEeecccccCcccccCccCCCCccccCC
Q 042515 133 IRQALDQPLNYARIYLADLLPLTVGRIIYFDSDLIVVDDVAKLWSINLRGRVLGAPEYCHANFTNYFTSKFWSNPVFSGT 212 (342)
Q Consensus 133 ~~~~~~~~~~y~Rl~l~~llp~~vdRvIYLDsDiiV~~Di~~L~~~dl~~~~iaA~~d~~~~~~~~~~~~~w~~~~~~~~ 212 (342)
..+.++.+|+||++|+++|++++||||||+|+||++||++||++|++|+.+||+++|.... |.+......
T Consensus 80 --~~~~s~~~~~rl~~~~l~p~~~~kvlylD~D~iv~~di~~L~~~dl~~~~~aav~d~~~~~--------~~~~~~~~~ 149 (276)
T 3tzt_A 80 --TDRYPKEMYYRLLAGEFLPENLGEILYLDPDMLVINPLDDLLRTDISDYILAAASHTGKTD--------MANNVNRIR 149 (276)
T ss_dssp ------CHHHHHHHTHHHHSCTTCCEEEEECSSEEECSCSHHHHTCCCTTSSEEEEEC----------------------
T ss_pred --ccccCHHHHHHHHHHHHcccccCeEEEEeCCeeecCCHHHHhhcCCCCCeEEEEEecccch--------HHHHHHHhc
Confidence 1345778999999999999779999999999999999999999999999999999875320 111000112
Q ss_pred CCCCCCccceeeEEEEehhHHhhccHHHHHHHHHHHhcccccccCCCcchhhhhhcCceEecCc-cccccCCCCCc--cc
Q 042515 213 VKGRRPCYFNTGVMVIDLRKWREGRYTEKLEYWMRVQKKYRIYELGSLPPFLLVFAGDVEGVEH-RWNQHGLGGDN--LE 289 (342)
Q Consensus 213 ~~~~~~~yFNsGVmlinL~~wR~~~~~~~~~~~~~~~~~~~~~~~~DQd~lN~vf~~~i~~L~~-~wN~~~~~~~~--~~ 289 (342)
+ +...+|||||||||||++||+.++++++++|+++++. + +.++|||+||.+|.++++.||+ +||++...... ..
T Consensus 150 l-~~~~~yfNsGV~linl~~~R~~~~~~~~~~~~~~~~~-~-~~~~DQd~LN~~f~~~~~~Lp~~~wN~~~~~~~~~~~~ 226 (276)
T 3tzt_A 150 L-GTDTDYYNSGLLLINLKRAREEIDPDEIFSFVEDNHM-N-LLLPDQDILNAMYGDRIYPLDDLIYNYDARNYSSYLIR 226 (276)
T ss_dssp -------CEEEEEEEEEHHHHHHHCCHHHHHHHHHHC----------CHHHHHHHGGGEEEEEHHHHSEETTCHHHHHHH
T ss_pred C-CCCCCeEEeeEEEEEHHHHHhhhHHHHHHHHHHhccc-c-ccCCChhHHHHHHhCCEEECCchheeeecccchhhhcc
Confidence 2 2235899999999999999999999999999986542 2 2469999999999999999999 99998532110 00
Q ss_pred cc-cccC--CCCCcEEEeccCCCCCCccCCCCCCCCcccccccccccCC
Q 042515 290 GL-CRNL--HPGPVSLLHWSGKGKPWLRIDSKKPCPLDSLWAPYDLFRH 335 (342)
Q Consensus 290 ~~-~~~~--~~~~~~IiHy~g~~KPW~~~~~~~~~~~~~lW~~Y~~~~~ 335 (342)
.. ..+. ...+++||||+|+.|||...+.. +++++||+|.....
T Consensus 227 ~~~~~~~~~~~~~~~iiHy~g~~KPW~~~~~~---~~~~~w~~Y~~~~~ 272 (276)
T 3tzt_A 227 SKKQADLAWLMDHTVVLHFCGRDKPWKKNHRN---KFTSLYKHYMSLTK 272 (276)
T ss_dssp TTTCCSHHHHHHHCCEEECCSSCCTTSTTCCS---TTHHHHHHHHHHHH
T ss_pred ccchhhhhhhccCCeEEEECCCCCCcCCCCCC---chHHHHHHHHHHHH
Confidence 00 0000 01357999999999999987654 59999999976543
|
| >1g9r_A Glycosyl transferase; alpha-beta structure; HET: UPF; 2.00A {Neisseria meningitidis} SCOP: c.68.1.4 PDB: 1ga8_A* 1ss9_A* | Back alignment and structure |
|---|
| >1ll2_A Glycogenin-1; protein-substrate complex, beta-alpha-beta rossman-like NUCL binding fold, DXD motif, non-proline CIS peptide bond, TRAN; HET: UPG; 1.90A {Oryctolagus cuniculus} SCOP: c.68.1.14 PDB: 1ll3_A 1ll0_A 1zcv_A 1zcu_A 1zdf_A* 1zcy_A 1zdg_A* | Back alignment and structure |
|---|
| >3u2u_A Glycogenin-1, GN-1, GN1; structural genomics, structural genomics consortium, SGC, transferase, glycosyltransferase, glycogen biosynthesis; HET: GLC UDP; 1.45A {Homo sapiens} SCOP: c.68.1.14 PDB: 3t7n_A* 3t7o_A* 3t7m_A* 3u2v_A* 3u2x_A* 3u2t_A 3rmv_A* 3rmw_A* 3u2w_A* 3qvb_A* 3q4s_A* 1zct_A* 3v8y_A 3v8z_A* 3usr_A 3v90_A 3v91_A* 3usq_A | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 342 | ||||
| d1ga8a_ | 282 | c.68.1.4 (A:) Galactosyltransferase LgtC {Neisseri | 2e-29 | |
| d1ll2a_ | 263 | c.68.1.14 (A:) Glycogenin {Rabbit (Oryctolagus cun | 5e-07 |
| >d1ga8a_ c.68.1.4 (A:) Galactosyltransferase LgtC {Neisseria meningitidis [TaxId: 487]} Length = 282 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-diphospho-sugar transferases superfamily: Nucleotide-diphospho-sugar transferases family: Galactosyltransferase LgtC domain: Galactosyltransferase LgtC species: Neisseria meningitidis [TaxId: 487]
Score = 112 bits (280), Expect = 2e-29
Identities = 57/298 (19%), Positives = 92/298 (30%), Gaps = 35/298 (11%)
Query: 57 IHISMTLDSTYLRGSVAGVFSVLQHATCPENIVFHFISTQRQRLELSR-TITATFPYLNF 115
+ I D Y SV I FH + + N
Sbjct: 1 MDIVFAADDNYAAYLCVAAKSVEAAHP-DTEIRFHVLDAGISEANRAAVAANLRGGGGNI 59
Query: 116 EIYRFDTNLVKGKISYSIRQALDQPLNYARIYLADLLPLTVGRIIYFDSDLIVVDDVAKL 175
+ G + + YAR+ L + + +++Y D D++V D + L
Sbjct: 60 RFIDVNPEDFAG---FPLNIRHISITTYARLKLGEYIA-DCDKVLYLDIDVLVRDSLTPL 115
Query: 176 WSINLRGRVLGA-PEYCHANFTNYFTSKFWSNPVFSGTVKGRRPCYFNTGVMVIDLRKWR 234
W +L LGA + Y ++ YFN GV++I+L+KWR
Sbjct: 116 WDTDLGDNWLGASIDLFVERQEGYKQKIGMADG----------EYYFNAGVLLINLKKWR 165
Query: 235 EGRYTEKLEYWMRVQKKYRIYELGSLPPFLLVFAGDVEGVEHRWNQHGLGGDNLEGLCRN 294
+ W+ K Y +F G V R+N + +
Sbjct: 166 RHDIFKMSSEWVEQYKDVMQY--QDQDILNGLFKGGVCYANSRFNFMPTNYAFMANWFAS 223
Query: 295 LHP-----------GPVSLLHWSGKGKPWLRIDSKKPCPL-----DSLWAPYDLFRHK 336
H PV++ H+ G KPW R + SL + +R K
Sbjct: 224 RHTDPLYRDRTNTVMPVAVSHYCGPAKPWHRDCTAWGAERFTELAGSLTTVPEEWRGK 281
|
| >d1ll2a_ c.68.1.14 (A:) Glycogenin {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 263 | Back information, alignment and structure |
|---|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 342 | |||
| d1ga8a_ | 282 | Galactosyltransferase LgtC {Neisseria meningitidis | 100.0 | |
| d1ll2a_ | 263 | Glycogenin {Rabbit (Oryctolagus cuniculus) [TaxId: | 99.96 | |
| d1o7qa_ | 287 | alpha-1,3-galactosyltransferase catalytic domain { | 95.8 | |
| d1lzia_ | 283 | Glycosyltransferase A catalytic domain {Human (Hom | 94.72 | |
| d1xhba2 | 328 | Polypeptide N-acetylgalactosaminyltransferase 1, N | 91.39 | |
| d1s4na_ | 339 | Glycolipid 2-alpha-mannosyltransferase {Baker's ye | 80.88 | |
| d1fo8a_ | 343 | N-acetylglucosaminyltransferase I {Rabbit (Oryctol | 80.85 |
| >d1ga8a_ c.68.1.4 (A:) Galactosyltransferase LgtC {Neisseria meningitidis [TaxId: 487]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-diphospho-sugar transferases superfamily: Nucleotide-diphospho-sugar transferases family: Galactosyltransferase LgtC domain: Galactosyltransferase LgtC species: Neisseria meningitidis [TaxId: 487]
Probab=100.00 E-value=1e-45 Score=342.45 Aligned_cols=258 Identities=21% Similarity=0.280 Sum_probs=193.3
Q ss_pred ceEEEEeCcchhhchHHHHHHHHHhcCCCCCEEEEEEecCcCHHHHHHHHHhhCC--CccEEEEEecCccccCccchhhh
Q 042515 57 IHISMTLDSTYLRGSVAGVFSVLQHATCPENIVFHFISTQRQRLELSRTITATFP--YLNFEIYRFDTNLVKGKISYSIR 134 (342)
Q Consensus 57 i~I~~~~D~~yl~~~~v~i~Sll~~~~~~~~i~fhil~~~~s~~~l~~~l~~~~p--~~~~~~~~~d~~~~~~~i~~~~~ 134 (342)
||||+|+|++|+.++.|+++||++|++. ++++||+++++++.+..+ .+.+... +.+++++.++...+......
T Consensus 1 mnIv~~~D~nY~~~~~~~i~SL~~~~~~-~~~~~~il~~~~~~~~~~-~l~~~~~~~~~~i~~~~~~~~~~~~~~~~--- 75 (282)
T d1ga8a_ 1 MDIVFAADDNYAAYLCVAAKSVEAAHPD-TEIRFHVLDAGISEANRA-AVAANLRGGGGNIRFIDVNPEDFAGFPLN--- 75 (282)
T ss_dssp CEEEEEECGGGHHHHHHHHHHHHHHCTT-SCCEEEEEESSCCHHHHH-HHHHTSGGGTTTEEEEECCGGGGTTSCCC---
T ss_pred CEEEEECCHHHHHHHHHHHHHHHHHCcC-CCEEEEEEcCCCCHHHHH-HHHHHHHHcCCeEEEEECCchHhcccccc---
Confidence 7999999999999999999999998874 679999999999875533 3433322 34678888876655442211
Q ss_pred hhhcCcchhHHHhhhhhcccccCcEEEEecceEEecchHHHHccccCCCeEEeecccccCcccccCccCCCCccccCCCC
Q 042515 135 QALDQPLNYARIYLADLLPLTVGRIIYFDSDLIVVDDVAKLWSINLRGRVLGAPEYCHANFTNYFTSKFWSNPVFSGTVK 214 (342)
Q Consensus 135 ~~~~~~~~y~Rl~l~~llp~~vdRvIYLDsDiiV~~Di~~L~~~dl~~~~iaA~~d~~~~~~~~~~~~~w~~~~~~~~~~ 214 (342)
..+.++++|+||++|++|| +++||||||+|+||++||++||+++++++.+||+.++....... + ....++
T Consensus 76 ~~~~s~~~y~Rl~l~~~lp-~~~kiiyLD~D~iv~~dl~~L~~~~~~~~~~aa~~d~~~~~~~~-----~---~~~~~~- 145 (282)
T d1ga8a_ 76 IRHISITTYARLKLGEYIA-DCDKVLYLDIDVLVRDSLTPLWDTDLGDNWLGASIDLFVERQEG-----Y---KQKIGM- 145 (282)
T ss_dssp CTTCCGGGGGGGGHHHHCC-SCSCEEEECSSEEECSCCHHHHTCCCTTCSEEEEECHHHHTSTT-----H---HHHTTC-
T ss_pred ccccCHHHHHHHHHhhhCC-ccceEEEecCCEEEecchHHHHhcccccceeeeehhhhhhhhhh-----h---HHHhCC-
Confidence 2345678999999999999 59999999999999999999999999999999987753211100 0 001112
Q ss_pred CCCCccceeeEEEEehhHHhhccHHHHHHHHHHHhcccccccCCCcchhhhhhcCceEecCccccccCCCCC---c-cc-
Q 042515 215 GRRPCYFNTGVMVIDLRKWREGRYTEKLEYWMRVQKKYRIYELGSLPPFLLVFAGDVEGVEHRWNQHGLGGD---N-LE- 289 (342)
Q Consensus 215 ~~~~~yFNsGVmlinL~~wR~~~~~~~~~~~~~~~~~~~~~~~~DQd~lN~vf~~~i~~L~~~wN~~~~~~~---~-~~- 289 (342)
..+.+||||||||+|+++||+.+++++++++++.+.. .+.++||++||.+|.|++..||.+||++..++. + ..
T Consensus 146 ~~~~~yfNsGVml~n~~~~r~~~~~~~~~~~~~~~~~--~~~~~DQd~LN~~f~~~~~~L~~~~N~~~~~~~~~~~~~~~ 223 (282)
T d1ga8a_ 146 ADGEYYFNAGVLLINLKKWRRHDIFKMSSEWVEQYKD--VMQYQDQDILNGLFKGGVCYANSRFNFMPTNYAFMANWFAS 223 (282)
T ss_dssp CTTSCCEEEEEEEECHHHHTTSCHHHHHHHHHHHHTT--TCSSTHHHHHHHHHTTSEEEECGGGSBCHHHHHTCC----C
T ss_pred CCCCceeecceeeechhhhhhhhHHHHHHHHHHhccc--CcccCchhHHHHHhcCCEEeCCHHHeecccccccccccccc
Confidence 2357899999999999999999999999999986543 234689999999999999999999998742110 0 00
Q ss_pred ----cccc--cCCCCCcEEEeccCCCCCCccCCCCCCCCcccccccccccC
Q 042515 290 ----GLCR--NLHPGPVSLLHWSGKGKPWLRIDSKKPCPLDSLWAPYDLFR 334 (342)
Q Consensus 290 ----~~~~--~~~~~~~~IiHy~g~~KPW~~~~~~~~~~~~~lW~~Y~~~~ 334 (342)
...+ .....+++||||+|+.|||+..... ++...|++|....
T Consensus 224 ~~~~~~~~~~~~~~~~~~iiHf~G~~KPW~~~~~~---~~~~~~~~~~~~~ 271 (282)
T d1ga8a_ 224 RHTDPLYRDRTNTVMPVAVSHYCGPAKPWHRDCTA---WGAERFTELAGSL 271 (282)
T ss_dssp SCCCHHHHHHHSCCSSCSEEECCSSCCTTSTTCCS---TTTHHHHHHHTTC
T ss_pred ccchhhhhhhhhccCCCEEEeeCCCCCCCCCCCCC---hhHHHHHHHHHhh
Confidence 0000 0112467999999999999987654 4678888776554
|
| >d1ll2a_ c.68.1.14 (A:) Glycogenin {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
| >d1o7qa_ c.68.1.9 (A:) alpha-1,3-galactosyltransferase catalytic domain {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
| >d1lzia_ c.68.1.9 (A:) Glycosyltransferase A catalytic domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1xhba2 c.68.1.17 (A:95-422) Polypeptide N-acetylgalactosaminyltransferase 1, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d1s4na_ c.68.1.16 (A:) Glycolipid 2-alpha-mannosyltransferase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
| >d1fo8a_ c.68.1.10 (A:) N-acetylglucosaminyltransferase I {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|