Citrus Sinensis ID: 042583

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200------
Protein Sequence
MKIKASCLFLLALLATTCDSSGFDHFWLVQVWPSGYCLQANCSQTSDRFIIHGLWAVNVVDKTLPDLMRYWLPLNENNLSRAENFWIYQWKKHGSAAKEFIQPRDYFQMALQLAKDTDLRNTLQNHGAVPILPDGGSYNKRDYKAAIKNKTGHDPLLKCVKGDDGISHLKEVIICVDDQAQSFIQCAKQKDRCYFDIMFDVPPRTN
Secondary Structure (PSIPRED)
cHHHHHHHHHHHHHHHccccccccEEEEEEEccccccccccccccccccEEEEEcccccccccHHHHHHcccccccccccccHHHHHHHHHHccccccccccHHHHHHHHHHHHHHccHHHHHHHccccccccccccccHHHHHHHHHHHHccccEEEEEEcccccEEEEEEEEEEcccccccccccccccccccccEEccccccc
Secondary Structure Prediction (SSPRO)
ccHHHHHHHHHHHHHHccccccccEEEEEEccccccccccccccccHHcEEEccccccccccccccHccccccccccccccccccHHHHHHHcccccHHHHcHHHHHHHHHHHHHHccHHHHHHHcccccccccccEEcHHHHHHHHHHHHcccccEEEcccccccEEEEEEEEEEccccccEEccccccccccccEEcccccccc
Coil and Loop (DISEMBL)
MKIKASCLFLLALLATtcdssgfdhfwlvqvwpsgyclqancsqtsdRFIIHGLWAVNVVDKTLPDLMRYwlplnennlsraeNFWIYQWKKHgsaakefiqpRDYFQMALQLAKDTdlrntlqnhgavpilpdggsynkrDYKAAIKnktghdpllkcvkgddgishLKEVIICVDDQAQSFIQCAKqkdrcyfdimfdvpprtn
Flexible Loop (DISEMBL)
MKIKASCLFLLALLATTCDSSGFDHFWLVQVWPSGYCLQANCSQTSDRFIIHGLWAVNVVDKTLPDLMRYWLPLNENNLSRAENFWIYQWKKHGSAAKEFIQPRDYFQMALQLAKDTDLRNTLQNhgavpilpdggsyNKRDYKAAIknktghdpllkCVKGDDGISHLKEVIICVDDQAQSFIQCAKQKDRCYFDIMFDVPPRTN
Low Complexity Region (SEG)
MKIKASclfllallattcDSSGFDHFWLVQVWPSGYCLQANCSQTSDRFIIHGLWAVNVVDKTLPDLMRYWLPLNENNLSRAENFWIYQWKKHGSAAKEFIQPRDYFQMALQLAKDTDLRNTLQNHGAVPILPDGGSYNKRDYKAAIKNKTGHDPLLKCVKGDDGISHLKEVIICVDDQAQSFIQCAKQKDRCYFDIMFDVPPRTN
Disordered region (IsUnstruct)
****ASCLFLLALLATTCDSSGFDHFWLVQVWPSGYCLQANCSQTSDRFIIHGLWAVNVVDKTLPDLMRYWLPLNENNLSRAENFWIYQWKKHGSAAKEFIQPRDYFQMALQLAKDTDLRNTLQNHGAVPILPDGGSYNKRDYKAAIKNKTGHDPLLKCVKGDDGISHLKEVIICVDDQAQSFIQCAKQKDRCYFDIMFDV*****
Disordered Region (DISOPRED)
*KIKASCLFLLALLATTCDSSGFDHFWLVQVWPSGYCLQANCSQTSDRFIIHGLWAVNVVDKTLPDLMRYWLPLNENNLSRAENFWIYQWKKHGSAAKEFIQPRDYFQMALQLAKDTDLRNTLQNHGAVPILPDGGSYNKRDYKAAIKNKTGHDPLLKCVKGDDGISHLKEVIICVDDQAQSFIQCAKQKDRCYFDIMFDVPP***
Disordered Region (DISEMBL)
MKIKASCLFLLALLATTCDSSGFDHFWLVQVWPSGYCLQANCSQTSDRFIIHGLWAVNVVDKTLPDLMRYWLPLNENNLSRAENFWIYQWKKHGSAAKEFIQPRDYFQMALQLAKDTDLRNTLQNHGAVPILPDGGSYNKRDYKAAIKNKTGHDPLLKCVKGDDGISHLKEVIICVDDQAQSFIQCAKQKDRCYFDIMFDVPPRTN
Disordered Region (DISPRO)
MKIKASCLFLLALLATTCDSSGFDHFWLVQVWPSGYCLQANCSQTSDRFIIHGLWAVNVVDKTLPDLMRYWLPLNENNLSRAENFWIYQWKKHGSAAKEFIQPRDYFQMALQLAKDTDLRNTLQNHGAVPILPDGGSYNKRDYKAAIKNKTGHDPLLKCVKGDDGISHLKEVIICVDDQAQSFIQCAKQKDRCYFDIMFDVP****
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
SSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MKIKASCLFLLALLATTCDSSGFDHFWLVQVWPSGYCLQANCSQTSDRFIIHGLWAVNVVDKTLPDLMRYWLPLNENNLSRAENFWIYQWKKHGSAAKEFIQPRDYFQMALQLAKDTDLRNTLQNHGAVPILPDGGSYNKRDYKAAIKNKTGHDPLLKCVKGDDGISHLKEVIICVDDQAQSFIQCAKQKDRCYFDIMFDVPPRTN
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	206	2.2.26 [Sep-21-2011]
P42813	230	Ribonuclease 1 OS=Arabido	yes	no	0.946	0.847	0.307	6e-21
P80022	230	Extracellular ribonucleas	N/A	no	0.868	0.778	0.333	3e-20
Q7SID5	196	Ribonuclease S-F11 OS=Nic	N/A	no	0.805	0.846	0.336	6e-20
Q40875	222	Ribonuclease S-3 OS=Petun	N/A	no	0.844	0.783	0.296	5e-19
Q40381	218	Ribonuclease S-7 OS=Nicot	N/A	no	0.873	0.825	0.307	7e-19
P42815	222	Ribonuclease 3 OS=Arabido	no	no	0.849	0.788	0.297	3e-17
P04007	214	Ribonuclease S-2 OS=Nicot	N/A	no	0.878	0.845	0.283	5e-17
P80196	237	Intracellular ribonucleas	N/A	no	0.873	0.759	0.296	3e-16
Q40379	215	Ribonuclease S-6 OS=Nicot	N/A	no	0.830	0.795	0.285	3e-16
Q38716	235	Ribonuclease S-2 OS=Antir	N/A	no	0.839	0.736	0.312	2e-15

>sp|P42813|RNS1_ARATH Ribonuclease 1 OS=Arabidopsis thaliana GN=RNS1 PE=1 SV=1

 Score =  100 bits (250), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 71/231 (30%), Positives = 101/231 (43%), Gaps = 36/231 (15%)

Query: 1   MKIKASCLFLLALLA-------TTCDSSGFDHFWLVQVWPSGYC------LQANCSQTSD 47
           MKI  + L L++LL         +  S  FD F+ VQ WP  YC         N  + + 
Sbjct: 1   MKILLASLCLISLLVILPSVFSASSSSEDFDFFYFVQQWPGSYCDTQKKCCYPNSGKPAA 60

Query: 48  RFIIHGLWAVNVVDKTLPDLMRYWLPLNENNLS------------------RAENFWIYQ 89
            F IHGLW  N  D T P       P + + +S                    E FW ++
Sbjct: 61  DFGIHGLWP-NYKDGTYPSNCDASKPFDSSTISDLLTSMKKSWPTLACPSGSGEAFWEHE 119

Query: 90  WKKHGSAAKEFIQPRDYFQMALQLAKDTDLRNTLQNHGAVPILPDGGSYNKRDYKAAIKN 149
           W+KHG+ ++  I   +YFQ AL L + T+L   L   G   I PDG SY+    + +IK 
Sbjct: 120 WEKHGTCSESVIDQHEYFQTALNLKQKTNLLGALTKAG---INPDGKSYSLESIRDSIKE 176

Query: 150 KTGHDPLLKCVKGDDGISHLKEVIICVDDQAQSFIQCAK-QKDRCYFDIMF 199
             G  P ++C +   G S L +V +CVD      I+C      +C  +I F
Sbjct: 177 SIGFTPWVECNRDGSGNSQLYQVYLCVDRSGSGLIECPVFPHGKCGAEIEF 227

May remobilize phosphate, particularly when cells senesce or when phosphate becomes limiting.
Arabidopsis thaliana (taxid: 3702)
EC: 3EC: .EC: 1EC: .EC: 2EC: 7EC: .EC: 1

>sp|P80022|RNLE_SOLLC Extracellular ribonuclease LE OS=Solanum lycopersicum PE=1 SV=2

 Score = 98.6 bits (244), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 71/213 (33%), Positives = 99/213 (46%), Gaps = 34/213 (15%)

Query: 4   KASCLFLLALLATTCDS-----SGFDHFWLVQVWPSGYC--LQANCSQTSDR----FIIH 52
            A  LFL+ L+ T C S       FD F+ VQ WP  YC   Q+ C  T+ +    F IH
Sbjct: 5   SAFSLFLILLIITQCLSVLNAAKDFDFFYFVQQWPGSYCDTKQSCCYPTTGKPAADFGIH 64

Query: 53  GLWAVNVVDKTLPDLMRYWLPLNENNLS------------------RAENFWIYQWKKHG 94
           GLW  N  D T P       P +++ +S                      FW ++W+KHG
Sbjct: 65  GLWPNNN-DGTYPSNCDPNSPYDQSQISDLISSMQQNWPTLACPSGSGSTFWSHEWEKHG 123

Query: 95  SAAKEFIQPRD-YFQMALQLAKDTDLRNTLQNHGAVPILPDGGSYNKRDYKAAIKNKTGH 153
           + A+  +  +  YF+ AL L    DL + LQ      I PDG SY+  + + AIK+  G+
Sbjct: 124 TCAESVLTNQHAYFKKALDLKNQIDLLSILQ---GADIHPDGESYDLVNIRNAIKSAIGY 180

Query: 154 DPLLKCVKGDDGISHLKEVIICVDDQAQSFIQC 186
            P ++C     G S L +V ICVD    S I+C
Sbjct: 181 TPWIQCNVDQSGNSQLYQVYICVDGSGSSLIEC 213

Probably involved in plant phosphate-starvation rescue system.

Solanum lycopersicum (taxid: 4081)

EC: 3

EC: .

EC: 1

EC: .

EC: 2

EC: 7

EC: .

EC: 1

>sp|Q7SID5|RNS11_NICAL Ribonuclease S-F11 OS=Nicotiana alata PE=1 SV=1

 Score = 97.4 bits (241), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 64/190 (33%), Positives = 89/190 (46%), Gaps = 24/190 (12%)

Query: 23  FDHFWLVQVWPSGYCLQANCSQTS-DRFIIHGLWAVNV----------------VDKTLP 65
           F++  LV  WP+ +C   +C + + + F IHGLW  NV                  K L 
Sbjct: 2   FEYLQLVLTWPASFCYANHCERIAPNNFTIHGLWPDNVKTRLHNCKPKPTYSYFTGKMLN 61

Query: 66  DLMRYWLPLN-ENNLSRAEN-FWIYQWKKHGSAAKEFIQPRDYFQMALQLAKDTDLRNTL 123
           DL ++W+ L  E +  R E   W YQ+ KHGS  ++      YF +AL+L    DL  TL
Sbjct: 62  DLDKHWMQLKFEQDYGRTEQPSWKYQYIKHGSCCQKRYNQNTYFGLALRLKDKFDLLRTL 121

Query: 124 QNHGAVPILPDGGSYNKRDYKAAIKNKTGHDPLLKCVKGDDGISHLKEVIICVDDQAQSF 183
           Q H  +P    G SY  +D   AIK  +  +P +KC +   G   L E+ IC    A S 
Sbjct: 122 QTHRIIP----GSSYTFQDIFDAIKTVSQENPDIKCAEVTKGTPELYEIGICFTPNADSM 177

Query: 184 IQCAKQKDRC 193
            +C  Q D C
Sbjct: 178 FRCP-QSDTC 186

Self-incompatibility (SI) is the inherited ability of a flowering plant to prevent self-fertilization by discriminating between self and non-self pollen during pollination. In many species of the Solanaceae, self-incompatibility is controlled by the single, multiallelic locus S.

Nicotiana alata (taxid: 4087)

EC: 3

EC: .

EC: 1

EC: .

EC: 2

EC: 7

EC: .

EC: 1

>sp|Q40875|RNS3_PETHY Ribonuclease S-3 OS=Petunia hybrida GN=S3 PE=3 SV=1

 Score = 94.4 bits (233), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 59/199 (29%), Positives = 92/199 (46%), Gaps = 25/199 (12%)

Query: 9   FLLALLATTCDSSGFDHFWLVQVWPSGYCLQAN-CSQTSDRFIIHGLWAVN--------- 58
           F + L + +  S+ FD+F LV  WP+ +C   N C + S+ F IHGLW            
Sbjct: 10  FFILLFSLSPVSANFDYFQLVLTWPASFCYPKNKCQRRSNNFTIHGLWPEKKRFRLEFCT 69

Query: 59  --------VVDKTLPDLMRYWLPL--NENNLSRAENFWIYQWKKHGSAAKEFIQPRDYFQ 108
                     D  +  L R+W+ +  +E   +  +  W +++ +HG   K     + YF 
Sbjct: 70  GDKYKRFLEEDNIINVLERHWIQMRFDETYANTKQPLWEHEYNRHGICCKNLYDQKAYFL 129

Query: 109 MALQLAKDTDLRNTLQNHGAVPILPDGGSYNKRDYKAAIKNKTG-HDPLLKCVKGDDGIS 167
           +A++L    DL  TL+ HG  P    G  +   + + AIK  T  +DP LKCV+   G+ 
Sbjct: 130 LAMRLKDKLDLLTTLRTHGITP----GTKHTFGEIQKAIKTVTSNNDPDLKCVENIKGVM 185

Query: 168 HLKEVIICVDDQAQSFIQC 186
            L E+ IC    A  F +C
Sbjct: 186 ELNEIGICYTPAADRFDRC 204

Self-incompatibility (SI) is the inherited ability of a flowering plant to prevent self-fertilization by discriminating between self and non-self pollen during pollination. In many species, self-incompatibility is controlled by the single, multiallelic locus S.

Petunia hybrida (taxid: 4102)

EC: 3

EC: .

EC: 1

EC: .

EC: 2

EC: 7

EC: .

EC: 1

>sp|Q40381|RNS7_NICAL Ribonuclease S-7 OS=Nicotiana alata PE=1 SV=1

 Score = 94.0 bits (232), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 63/205 (30%), Positives = 88/205 (42%), Gaps = 25/205 (12%)

Query: 5   ASCLFLLALLATTCDSSGFDHFWLVQVWPSGYCLQANCSQTSDRFIIHGLWAVNVV---- 60
            S LF+L L   +     F++  LV  WP+ +C    C +  + F IHGLW  NV     
Sbjct: 7   TSVLFVL-LFVLSPIYGAFEYMQLVLQWPTAFCHTTPCKRIPNNFTIHGLWPDNVSTTLN 65

Query: 61  -------------DKTLPDLMRYW--LPLNENNLSRAENFWIYQWKKHGSAAKEFIQPRD 105
                        D    DL + W  L   E    + +NFW +++ KHG    E      
Sbjct: 66  YCAAKENFKNIEDDTKKDDLYKRWPDLTTAETYCKQHQNFWRHEYNKHGKCCSESYNREQ 125

Query: 106 YFQMALQLAKDTDLRNTLQNHGAVPILPDGGSYNKRDYKAAIKNKTGHDPLLKCVKGDDG 165
           YF +A+ L    DL ++L+NHG +P    G  Y  +   + IK  T   P L C K   G
Sbjct: 126 YFDLAMALKDKFDLLSSLRNHGIIP--GRGMKYTVQKINSTIKKITQGYPNLSCTK---G 180

Query: 166 ISHLKEVIICVDDQAQSFIQCAKQK 190
           I  L E+ IC D   ++ I C   K
Sbjct: 181 IMELVEIGICFDSMVKNVINCPHPK 205

Self-incompatibility (SI) is the inherited ability of a flowering plant to prevent self-fertilization by discriminating between self and non-self pollen during pollination. In many species of the Solanaceae, self-incompatibility is controlled by the single, multiallelic locus S. This stylar glycoprotein is associated with expression of self-incompatibility in potato.

Nicotiana alata (taxid: 4087)

EC: 3

EC: .

EC: 1

EC: .

EC: 2

EC: 7

EC: .

EC: 1

>sp|P42815|RNS3_ARATH Ribonuclease 3 OS=Arabidopsis thaliana GN=RNS3 PE=2 SV=1

 Score = 88.2 bits (217), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 61/205 (29%), Positives = 87/205 (42%), Gaps = 30/205 (14%)

Query: 8   LFLLAL--LATTCDSSGFDHFWLVQVWPSGYC------LQANCSQTSDRFIIHGLWAVNV 59
           +F+LAL  L     +  FD F+ V  WP  YC            + +  F IHGLW    
Sbjct: 5   IFILALQQLYVQSFAQDFDFFYFVLQWPGAYCDSRHSCCYPQTGKPAADFGIHGLWPNYK 64

Query: 60  ------------------VDKTLPDLMRYWLPLNENNLSRAENFWIYQWKKHGSAAKEFI 101
                             V   + DL R W P      +    FW ++W+KHG+ A+  +
Sbjct: 65  TGGWPQNCNPDSRFDDLRVSDLMSDLQREW-PTLSCPSNDGMKFWTHEWEKHGTCAESEL 123

Query: 102 QPRDYFQMALQLAKDTDLRNTLQNHGAVPILPDGGSYNKRDYKAAIKNKTGHDPLLKCVK 161
              DYF+  L+L +  +L + L N G   I PD   Y  +D +  IK   G  P ++C K
Sbjct: 124 DQHDYFEAGLKLKQKANLLHALTNAG---IKPDDKFYEMKDIENTIKQVVGFAPGIECNK 180

Query: 162 GDDGISHLKEVIICVDDQAQSFIQC 186
                S L ++ +CVD  A  FI C
Sbjct: 181 DSSHNSQLYQIYLCVDTSASKFINC 205

May remobilize phosphate, particularly when cells senesce or when phosphate becomes limiting.

Arabidopsis thaliana (taxid: 3702)

EC: 3

EC: .

EC: 1

EC: .

EC: 2

EC: 7

EC: .

EC: 1

>sp|P04007|RNS2_NICAL Ribonuclease S-2 OS=Nicotiana alata GN=S-2 PE=1 SV=1

 Score = 87.8 bits (216), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 59/208 (28%), Positives = 92/208 (44%), Gaps = 27/208 (12%)

Query: 2   KIKASCLFLLALLATTCDSSGFDHFWLVQVWPSGYCLQANCSQTSDRFIIHGLWA----- 56
           K + + +F + L A +     F++  LV  WP  +C   +C +T   F IHGLW      
Sbjct: 3   KSQLTSVFFILLCALSPIYGAFEYMQLVLTWPITFCRIKHCERTPTNFTIHGLWPDNHTT 62

Query: 57  -VNVVDKTLP-----------DLMRYWLPLNENNLSRAEN--FWIYQWKKHGSAAKEFIQ 102
            +N  D++ P           DL   W  L +      +   FW  ++ KHG+   +   
Sbjct: 63  MLNYCDRSKPYNMFTDGKKKNDLDERWPDLTKTKFDSLDKQAFWKDEYVKHGTCCSDKFD 122

Query: 103 PRDYFQMALQLAKDTDLRNTLQNHGAVPILPDGGSYNKRDYKAAIKNKTGHDPLLKCVKG 162
              YF +A+ L    DL ++L+NHG    +  G SY  ++    IK  TG  P L C + 
Sbjct: 123 REQYFDLAMTLRDKFDLLSSLRNHG----ISRGFSYTVQNLNNTIKAITGGFPNLTCSR- 177

Query: 163 DDGISHLKEVIICVDDQAQSFIQCAKQK 190
              +  LKE+ IC D+  ++ I C   K
Sbjct: 178 ---LRELKEIGICFDETVKNVIDCPNPK 202

Self-incompatibility (SI) is the inherited ability of a flowering plant to prevent self-fertilization by discriminating between self and non-self pollen during pollination. In many species of the Solanaceae, self-incompatibility is controlled by the single, multiallelic locus S. This stylar glycoprotein is associated with expression of self-incompatibility in potato.

Nicotiana alata (taxid: 4087)

EC: 3

EC: .

EC: 1

EC: .

EC: 2

EC: 7

EC: .

EC: 1

>sp|P80196|RNLX_SOLLC Intracellular ribonuclease LX OS=Solanum lycopersicum GN=RNALX PE=1 SV=2

 Score = 85.1 bits (209), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 62/209 (29%), Positives = 86/209 (41%), Gaps = 29/209 (13%)

Query: 2   KIKASCLFLLALLATTCDSSGFDHFWLVQVWPSGYC--LQANCSQTSDR----FIIHGLW 55
           K+    + +  LL     S  FD F+ VQ WP+ YC   ++ C  T+ +    F IHGLW
Sbjct: 7   KLLIKIIVVQCLLVLCVTSQDFDFFYFVQQWPASYCDTRRSCCYPTTGKPDEDFSIHGLW 66

Query: 56  AVNVVDKTLPDLMRYWLPLNENNLSR------------------AENFWIYQWKKHGSAA 97
             N  D   P        L+E+  S                      FW ++W KHG+ +
Sbjct: 67  P-NYKDGKWPQNCDRESSLDESEFSDLISTMEKNWPSLACPSSDGLKFWSHEWLKHGTCS 125

Query: 98  KEFIQPRDYFQMALQLAKDTDLRNTLQNHGAVPILPDGGSYNKRDYKAAIKNKTGHDPLL 157
              +    YFQ AL     ++L   L N G  P   +G  Y     K AI+   GH P +
Sbjct: 126 A--LNQHAYFQTALDFKTKSNLLQNLNNAGIKP--RNGDYYGVESIKKAIEKGVGHTPFI 181

Query: 158 KCVKGDDGISHLKEVIICVDDQAQSFIQC 186
           +C     G   L +V +CVD  A  FI C
Sbjct: 182 ECNVDSQGNHQLYQVYLCVDSSASKFIDC 210

Solanum lycopersicum (taxid: 4081)

EC: 3

EC: .

EC: 1

EC: .

EC: 2

EC: 7

EC: .

EC: 1

>sp|Q40379|RNS6_NICAL Ribonuclease S-6 OS=Nicotiana alata PE=1 SV=2

 Score = 85.1 bits (209), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 60/210 (28%), Positives = 87/210 (41%), Gaps = 39/210 (18%)

Query: 6   SCLFLLALLATTCDSSGFDHFWLVQVWPSGYCLQANCSQTSDRFIIHGLWAVNVVDKTL- 64
           + +F++ L A +     F++  LV  WP+ +C    C      F IHGLW  NV   TL 
Sbjct: 7   TSVFVIFLFALSPIYGAFEYMQLVLQWPTAFCHTTPCKNIPSNFTIHGLWPDNV-STTLN 65

Query: 65  ------------------------PDLMRYWLPLNENNLSRAENFWIYQWKKHGSAAKEF 100
                                   PDL+R      + +  + +NFW  ++ KHG+   E 
Sbjct: 66  FCGKEDDYNIIMDGPEKNGLYVRWPDLIR-----EKADCMKTQNFWRREYIKHGTCCSEI 120

Query: 101 IQPRDYFQMALQLAKDTDLRNTLQNHGAVPILPDGGSYNKRDYKAAIKNKTGHDPLLKCV 160
                YF++A+ L    DL  +L+NHG +     G  Y  +     IK  T   P L C 
Sbjct: 121 YNQVQYFRLAMALKDKFDLLTSLKNHGII----RGYKYTVQKINNTIKTVTKGYPNLSCT 176

Query: 161 KGDDGISHLKEVIICVDDQAQSFIQCAKQK 190
           KG +    L  V IC D  A++ I C   K
Sbjct: 177 KGQE----LWFVGICFDSTAKNVIDCPNPK 202

Self-incompatibility (SI) is the inherited ability of a flowering plant to prevent self-fertilization by discriminating between self and non-self pollen during pollination. In many species of the Solanaceae, self-incompatibility is controlled by the single, multiallelic locus S. This stylar glycoprotein is associated with expression of self-incompatibility in potato.

Nicotiana alata (taxid: 4087)

EC: 3

EC: .

EC: 1

EC: .

EC: 2

EC: 7

EC: .

EC: 1

>sp|Q38716|RNS2_ANTHI Ribonuclease S-2 OS=Antirrhinum hispanicum GN=S2 PE=2 SV=1

 Score = 82.4 bits (202), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 64/205 (31%), Positives = 88/205 (42%), Gaps = 32/205 (15%)

Query: 5   ASCLFLLALLATTCDSSGFDHFWLVQVWPSGYCL--QANCSQT--SDRFIIHGLWAVN-- 58
             C+  L+   +T  ++ FD+F LV  WP+ YC     +C +T    +F IHGLW  N  
Sbjct: 16  VGCIVHLSNFCST-TTAQFDYFKLVLQWPNSYCSLKTTHCPRTRLPSQFTIHGLWPDNKS 74

Query: 59  ---------------VVDKTL-PDLMRYWLPLNENNLS-RAENFWIYQWKKHGSAAKEFI 101
                          + DK L  DL  +W  L         + FW+ QWKKHG+ A    
Sbjct: 75  WPLSNCRDTSADVLKITDKGLIQDLAVHWPDLTRRQRKVPGQKFWVTQWKKHGACALPMY 134

Query: 102 QPRDYFQMALQLAKDTDLRNTLQNHGAVPILPDGGSYNKRDYKAAIKNKTGHDPLLKCVK 161
              DYF  AL+L K  ++ + L       + P     +  D   AI   TG   +LKC +
Sbjct: 135 SFNDYFVKALELKKRNNVLDMLSRKS---LTPGDQRVDVSDVNGAITKVTGGIAILKCPE 191

Query: 162 GDDGISHLKEVIICVDDQAQSFIQC 186
           G     +L EVIIC D      I C
Sbjct: 192 G-----YLTEVIICFDPSGFPVIDC 211

Self-incompatibility (SI) is the inherited ability of a flowering plant to prevent self-fertilization by discriminating between self and non-self pollen during pollination. In many species, self-incompatibility is controlled by the single, multiallelic locus S.

Antirrhinum hispanicum (taxid: 49039)

EC: 3

EC: .

EC: 1

EC: .

EC: 2

EC: 7

EC: .

EC: 1

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	206
9957752	227	S-like ribonuclease [Prunus dulcis]	0.907	0.823	0.334	9e-23
356498296	227	PREDICTED: ribonuclease 1-like [Glycine	0.888	0.806	0.320	1e-21
223670932	225	S-like ribonuclease [Dionaea muscipula]	0.849	0.777	0.343	3e-21
71611076	227	ribonuclease [Drosera adelae] gi|7575560	0.893	0.810	0.336	7e-21
225425666	226	PREDICTED: extracellular ribonuclease LE	0.849	0.774	0.330	3e-20
3860325	229	ribonuclease T2 [Cicer arietinum]	0.864	0.777	0.319	7e-20
388507378	226	unknown [Lotus japonicus]	0.912	0.831	0.304	1e-19
359473629	226	PREDICTED: LOW QUALITY PROTEIN: extracel	0.849	0.774	0.325	1e-19
255562874	226	ribonuclease t2, putative [Ricinus commu	0.883	0.805	0.305	1e-19
224098878	227	predicted protein [Populus trichocarpa]	0.839	0.762	0.321	1e-19

>gi|9957752|gb|AAG09465.1|AF227522_1 S-like ribonuclease [Prunus dulcis]

 Score =  112 bits (280), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 73/218 (33%), Positives = 104/218 (47%), Gaps = 31/218 (14%)

Query: 8   LFLLALLATTCDSSGFDHFWLVQVWPSGYC--LQANCSQTSDR----FIIHGLWAVNVVD 61
           LF++  L+  C S  FD F+ VQ WP  YC   Q  C   S +    F IHGLW  N  D
Sbjct: 12  LFVIQYLSVLCVSQDFDFFYFVQQWPGAYCDTKQTCCYPKSGKPSADFGIHGLWP-NYKD 70

Query: 62  KTLP-------------------DLMRYWLPLNENNLSRAENFWIYQWKKHGSAAKEFIQ 102
            + P                   +L + W  L   + S    FW ++W+KHG+ ++  + 
Sbjct: 71  GSYPSNCDPDSVFDKSEISELTSNLEKNWPSLTCPS-SNGFRFWSHEWEKHGTCSESELD 129

Query: 103 PRDYFQMALQLAKDTDLRNTLQNHGAVPILPDGGSYNKRDYKAAIKNKTGHDPLLKCVKG 162
            +DYF+ AL+L +  +L   L+  G   I+PD G Y+    K AIK   G+ P ++C K 
Sbjct: 130 QKDYFEAALKLKQKVNLLQILKTAG---IVPDDGMYSLESIKEAIKEGAGYTPGIECNKD 186

Query: 163 DDGISHLKEVIICVDDQAQSFIQC-AKQKDRCYFDIMF 199
             G S L +V +CVD   Q  I+C    K RC  D+ F
Sbjct: 187 SAGNSQLYQVYLCVDTSGQDIIECPVLPKGRCASDVQF 224

Source: Prunus dulcis

Species: Prunus dulcis

Genus: Prunus

Family: Rosaceae

Order: Rosales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356498296|ref|XP_003517989.1| PREDICTED: ribonuclease 1-like [Glycine max]

 Score =  108 bits (271), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 68/212 (32%), Positives = 99/212 (46%), Gaps = 29/212 (13%)

Query: 13  LLATTCDSSGFDHFWLVQVWPSGYC--LQANCSQTSDR----FIIHGLWAVNVVDKTLPD 66
             +  C S  F+ F+ VQ WP  YC   ++ C  T+ +    F IHGLW  N  D T P 
Sbjct: 17  FFSVLCASPDFNFFYFVQQWPGSYCDTQKSCCYPTTGKPAADFGIHGLWP-NYNDGTYPS 75

Query: 67  LMRYWLPLNENNLSRAEN------------------FWIYQWKKHGSAAKEFIQPRDYFQ 108
                 P N + +S   +                  FW ++W KHG+ ++  ++  DYF+
Sbjct: 76  NCDPNNPFNPSGISDLTSSLQSNWPTLACPSSDGITFWTHEWDKHGTCSESVLKQHDYFE 135

Query: 109 MALQLAKDTDLRNTLQNHGAVPILPDGGSYNKRDYKAAIKNKTGHDPLLKCVKGDDGISH 168
            AL L +  +L   L N G   I PDG SY+  D K AIKN  G+ P ++C     G S 
Sbjct: 136 AALNLRQKANLLQALTNAG---IQPDGQSYSLSDIKEAIKNGIGYAPFIECNVDSSGNSQ 192

Query: 169 LKEVIICVDDQAQSFIQCAK-QKDRCYFDIMF 199
           L +V +CV+     F++C    + +C  DI F
Sbjct: 193 LYQVYLCVNTSGSDFMECPVFPRSKCGSDIEF 224

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|223670932|dbj|BAH22709.1| S-like ribonuclease [Dionaea muscipula]

 Score =  107 bits (266), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 70/204 (34%), Positives = 99/204 (48%), Gaps = 29/204 (14%)

Query: 8   LFLLALLATTCDSSGFDHFWLVQVWPSGYC--LQANCSQTSDR----FIIHGLW------ 55
           L +   LA      GFD F+ VQ WP  YC   Q+ C  T+ +    F IHGLW      
Sbjct: 9   LLVWQSLAAVALCQGFDFFYFVQQWPGSYCDTSQSCCYPTTGKPASDFGIHGLWPNYNSG 68

Query: 56  -------AVNVVDKT-----LPDLMRYWLPLNENNLSRAENFWIYQWKKHGSAAKEFIQP 103
                  + N  D +     L  +   W  L+  + S   +FW ++W KHG+ ++  +  
Sbjct: 69  SYPSNCDSSNPFDPSQIQDLLSQMQTEWPSLSCPS-SDGTSFWTHEWNKHGTCSESVLNE 127

Query: 104 RDYFQMALQLAKDTDLRNTLQNHGAVPILPDGGSYNKRDYKAAIKNKT-GHDPLLKCVKG 162
             YFQ AL L   ++L  TL N G   I P+G SYN  D  AA+K  T G+D  ++C   
Sbjct: 128 HAYFQAALSLKNSSNLLQTLANAG---ITPNGNSYNLSDVLAAMKQATGGYDAYIQCNTD 184

Query: 163 DDGISHLKEVIICVDDQAQSFIQC 186
            +G S L +V +CV+   QSFI+C
Sbjct: 185 QNGNSQLYQVYMCVNTSGQSFIEC 208

Source: Dionaea muscipula

Species: Dionaea muscipula

Genus: Dionaea

Family: Droseraceae

Order: Caryophyllales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|71611076|dbj|BAE16663.1| ribonuclease [Drosera adelae] gi|75755603|dbj|BAE44977.1| ribonuclease [Drosera adelae]

 Score =  106 bits (264), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 72/214 (33%), Positives = 100/214 (46%), Gaps = 30/214 (14%)

Query: 11  LALLATTCDSSGFDHFWLVQVWPSGYC--LQANCSQTSDR----FIIHGLW--------- 55
           LA +A  C S GFD F+ VQ WP  YC   +  C+ TS +    F IHGLW         
Sbjct: 16  LAAMAL-CQSPGFDFFYFVQQWPGAYCDTSRGCCNPTSGKPPSDFGIHGLWPNYNSGGYP 74

Query: 56  ----AVNVVDKT-----LPDLMRYWLPLNENNLSRAENFWIYQWKKHGSAAKEFIQPRDY 106
               + N  D +     L  L   W  L   + S   +FW ++W KHG+ ++  +    Y
Sbjct: 75  SNCDSSNPFDPSQIQDLLSQLQTQWPSLTCPS-SDGTSFWTHEWNKHGTCSESVLTEHAY 133

Query: 107 FQMALQLAKDTDLRNTLQNHGAVPILPDGGSYNKRDYKAAIKNKTGHDPLLKCVKGDDGI 166
           F  AL L    +   +L N G   I P+   YN  D  AAIK  TGHD  ++C   ++G 
Sbjct: 134 FAAALNLKSQANTLASLTNAG---ITPNNSFYNLSDVLAAIKQGTGHDAYVQCNTDENGN 190

Query: 167 SHLKEVIICVDDQAQSFIQCAKQKDR-CYFDIMF 199
           S L ++ ICVD    +FI+C    ++ C   I F
Sbjct: 191 SQLYQIYICVDTTGANFIECPVAPNQNCPSSIEF 224

Source: Drosera adelae

Species: Drosera adelae

Genus: Drosera

Family: Droseraceae

Order: Caryophyllales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225425666|ref|XP_002275271.1| PREDICTED: extracellular ribonuclease LE [Vitis vinifera] gi|296086361|emb|CBI31950.3| unnamed protein product [Vitis vinifera]

 Score =  103 bits (258), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 67/203 (33%), Positives = 94/203 (46%), Gaps = 28/203 (13%)

Query: 8   LFLLALLATTCDSSGFDHFWLVQVWPSGYC--LQANCSQTSDR----FIIHGLWAVNVVD 61
           L ++  L   C S  FD F+LVQ WP  YC   Q+ C  T+ +    F IHGLW  N  D
Sbjct: 11  LLIIQCLTVVCFSQDFDFFYLVQQWPGSYCDSKQSCCYPTTGKPDADFGIHGLWP-NYRD 69

Query: 62  KTLPDLMRYWLPLNENNLS------------------RAENFWIYQWKKHGSAAKEFIQP 103
            + P       P +E+ +S                      FW ++W KHG+ ++  +  
Sbjct: 70  GSYPSNCDSNNPYDESEISDLIRSMQEEWPTLACPSGNGSKFWAHEWDKHGTCSESVLSQ 129

Query: 104 RDYFQMALQLAKDTDLRNTLQNHGAVPILPDGGSYNKRDYKAAIKNKTGHDPLLKCVKGD 163
             YF+ AL L KD DL   L+  G   I  +G SY   D K AIK+  G  P ++C    
Sbjct: 130 YQYFEAALDLKKDVDLVQILKKAG---IRANGESYPLYDIKDAIKDAVGVTPWIECNVDS 186

Query: 164 DGISHLKEVIICVDDQAQSFIQC 186
            G S L +V +CVD   ++ I+C
Sbjct: 187 SGNSQLYQVYLCVDTSGKNIIEC 209

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|3860325|emb|CAA10130.1| ribonuclease T2 [Cicer arietinum]

 Score =  102 bits (255), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 67/210 (31%), Positives = 99/210 (47%), Gaps = 32/210 (15%)

Query: 3   IKASCLFLLALLATTCDSSG--FDHFWLVQVWPSGYC--LQANCSQTSDR----FIIHGL 54
           IKA  + +L   +  C S    FD F+ VQ WP  YC   +A C  T+ +    F IHGL
Sbjct: 9   IKA--ILVLQCFSILCASQSQDFDFFYFVQQWPGSYCDSKKACCYPTTGKPDADFGIHGL 66

Query: 55  WAVNVVDKTLPDLMRYWLPLNENNLSRAEN------------------FWIYQWKKHGSA 96
           W  N  D T P       P +E+ +S   +                  FW ++W+KHG+ 
Sbjct: 67  WP-NYKDGTYPSNCDPSKPFDESQISGLTSSLQKNWPTLACPSGDGITFWTHEWEKHGTC 125

Query: 97  AKEFIQPRDYFQMALQLAKDTDLRNTLQNHGAVPILPDGGSYNKRDYKAAIKNKTGHDPL 156
           ++  +   DYF+  L L +  +L   L + G   I  DGGSY+  + K AI++  G  P 
Sbjct: 126 SESVLNQHDYFETTLNLKQKANLLKALTSAG---INADGGSYSLSNIKTAIQDGVGFAPF 182

Query: 157 LKCVKGDDGISHLKEVIICVDDQAQSFIQC 186
           ++C +   G S L +V +CVD+    FI C
Sbjct: 183 IECNRDSSGNSQLYQVYLCVDNSGSDFIDC 212

Source: Cicer arietinum

Species: Cicer arietinum

Genus: Cicer

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388507378|gb|AFK41755.1| unknown [Lotus japonicus]

 Score =  102 bits (254), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 66/217 (30%), Positives = 102/217 (47%), Gaps = 29/217 (13%)

Query: 8   LFLLALLATTCDSSGFDHFWLVQVWPSGYC--LQANCSQTSDR----FIIHGLWA----- 56
           L +L  L+  C S  FD F+ VQ WP  YC   Q+ C   + +    F IHGLW      
Sbjct: 11  LLILQYLSVQCLSDDFDFFYFVQQWPGAYCDSKQSCCYPKTGKPTADFGIHGLWPNYNDG 70

Query: 57  -------------VNVVDKTLPDLMRYWLPLNENNLSRAENFWIYQWKKHGSAAKEFIQP 103
                         + + + +  + + W  L+  + S    FW ++W+KHG+ A+  +  
Sbjct: 71  SWPSNCDPDSTFDKSEISELISSMEKSWPSLSCPS-SNGIRFWSHEWEKHGTCAESELGQ 129

Query: 104 RDYFQMALQLAKDTDLRNTLQNHGAVPILPDGGSYNKRDYKAAIKNKTGHDPLLKCVKGD 163
           R+YF+ AL+L +  +L   L+N     I PD   Y+    K AIK  +G  P ++C +  
Sbjct: 130 REYFEAALKLKEKVNLLQILKN---AEIQPDDEFYSIESIKDAIKEGSGFTPGIECNRDS 186

Query: 164 DGISHLKEVIICVDDQAQSFIQC-AKQKDRCYFDIMF 199
            G S L +V +CVD     FI+C    + +C  DI F
Sbjct: 187 RGNSQLYQVYMCVDTSGSDFIECPVSPRSKCGSDIQF 223

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359473629|ref|XP_003631335.1| PREDICTED: LOW QUALITY PROTEIN: extracellular ribonuclease LE-like [Vitis vinifera]

 Score =  102 bits (254), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 66/203 (32%), Positives = 94/203 (46%), Gaps = 28/203 (13%)

Query: 8   LFLLALLATTCDSSGFDHFWLVQVWPSGYC--LQANCSQTSDR----FIIHGLWAVNVVD 61
           L ++  L   C S  FD F+LVQ WP  YC   Q+ C  T+ +    F IHGLW  N  D
Sbjct: 11  LLIIQCLTVVCFSQDFDFFYLVQQWPGSYCDSKQSCCYPTTGKPDADFGIHGLWP-NYRD 69

Query: 62  KTLPDLMRYWLPLNENNLS------------------RAENFWIYQWKKHGSAAKEFIQP 103
            + P       P +E+ +S                      FW ++W KHG+ ++  +  
Sbjct: 70  GSYPSNCDSNNPYDESEISDLIRSMXEEWPTLACPSGNGSKFWAHEWDKHGTCSESVLSQ 129

Query: 104 RDYFQMALQLAKDTDLRNTLQNHGAVPILPDGGSYNKRDYKAAIKNKTGHDPLLKCVKGD 163
             YF+ AL L KD DL   L+  G   I  +G SY   + K AIK+  G  P ++C    
Sbjct: 130 HQYFEAALDLKKDVDLVQILKKAG---IRANGESYTLYNIKDAIKDAVGVTPWIECNVDS 186

Query: 164 DGISHLKEVIICVDDQAQSFIQC 186
            G S L +V +CVD   ++ I+C
Sbjct: 187 SGNSQLYQVYLCVDTFGKNIIEC 209

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255562874|ref|XP_002522442.1| ribonuclease t2, putative [Ricinus communis] gi|223538327|gb|EEF39934.1| ribonuclease t2, putative [Ricinus communis]

 Score =  102 bits (254), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 65/213 (30%), Positives = 100/213 (46%), Gaps = 31/213 (14%)

Query: 1   MKIKASCLFLLALLATT---CDSSGFDHFWLVQVWPSGYC--LQANCSQTSDR----FII 51
           M+   S LF+L ++      C S  FD F+ VQ WP  YC   Q+ C  T+ +    F I
Sbjct: 1   MRTHNSFLFMLLVVLYLSVLCASQDFDFFYFVQQWPGSYCDTKQSCCYPTTGKPAADFGI 60

Query: 52  HGLWAVNVVDKTLPDLMRYWLPLNENNLS------------------RAENFWIYQWKKH 93
           HGLW  N  D + P       P N+  +S                      FW ++W+KH
Sbjct: 61  HGLWP-NYDDGSYPSNCDSNNPFNQKKISDLTSSMQKNWPTLACPSGNGVTFWTHEWEKH 119

Query: 94  GSAAKEFIQPRDYFQMALQLAKDTDLRNTLQNHGAVPILPDGGSYNKRDYKAAIKNKTGH 153
           G+ ++  +    YF+ AL L K  +L   LQ   +  I+P+GG+Y+    K+AI+   G+
Sbjct: 120 GTCSESILDQHGYFKAALDLKKQVNLLQVLQ---SADIVPNGGTYSLSSIKSAIQESIGY 176

Query: 154 DPLLKCVKGDDGISHLKEVIICVDDQAQSFIQC 186
            P ++C     G S L ++ +CVD    + I+C
Sbjct: 177 TPWIECNSDASGNSQLYQIYLCVDTSGSNLIEC 209

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224098878|ref|XP_002311302.1| predicted protein [Populus trichocarpa] gi|222851122|gb|EEE88669.1| predicted protein [Populus trichocarpa]

 Score =  102 bits (253), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 65/202 (32%), Positives = 94/202 (46%), Gaps = 29/202 (14%)

Query: 23  FDHFWLVQVWPSGYC--LQANCSQTSDR----FIIHGLWAVNVVDKTLPDLMRYWLPLNE 76
           FD F+ VQ WP  YC   Q+ C  T+ +    F IHGLW  N  D   P       P N 
Sbjct: 27  FDFFYFVQQWPGSYCDTKQSCCYPTTGKPAADFGIHGLWP-NYQDGNYPQNCDSKNPFNP 85

Query: 77  NNLS------------------RAENFWIYQWKKHGSAAKEFIQPRDYFQMALQLAKDTD 118
           + ++                     +FW ++W+KHG+ ++  +    YFQ AL L K  +
Sbjct: 86  DKVADLRSSMQKNWPTLACPSGNGVSFWTHEWEKHGTCSESVLDQHGYFQAALSLQKQAN 145

Query: 119 LRNTLQNHGAVPILPDGGSYNKRDYKAAIKNKTGHDPLLKCVKGDDGISHLKEVIICVDD 178
           L   L + G   I PDGGSY+  + K AI+   G  P ++C     G S L ++ +CVD 
Sbjct: 146 LLQALASAG---INPDGGSYSMSNIKRAIQEAVGFTPWIECNTDASGNSQLYQIYLCVDT 202

Query: 179 QAQSFIQCAK-QKDRCYFDIMF 199
             ++ I+C    K +C  DI F
Sbjct: 203 TGKNLIECPVFPKGKCGSDIEF 224

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	206
TAIR|locus:2200665	222	RNS3 "ribonuclease 3" [Arabido	0.660	0.612	0.319	2e-21
TAIR|locus:2035871	228	AT1G14220 [Arabidopsis thalian	0.781	0.706	0.324	2.3e-16
TAIR|locus:2056755	230	RNS1 "ribonuclease 1" [Arabido	0.669	0.6	0.307	2.6e-15
ZFIN|ZDB-GENE-030131-2513	240	rnaset2 "ribonuclease T2" [Dan	0.854	0.733	0.293	8.8e-15
UNIPROTKB|P83618	238	P83618 "Ribonuclease-like stor	0.733	0.634	0.293	3.8e-14
UNIPROTKB|Q7M329	200	RNASET2 "Ribonuclease T2" [Sus	0.839	0.865	0.270	7.9e-14
UNIPROTKB|D6REQ6	218	RNASET2 "Ribonuclease T2" [Hom	0.762	0.720	0.265	1.3e-13
UNIPROTKB|D6RHI9	254	RNASET2 "Ribonuclease T2" [Hom	0.762	0.618	0.265	1.3e-13
UNIPROTKB|O00584	256	RNASET2 "Ribonuclease T2" [Hom	0.762	0.613	0.265	1.3e-13
UNIPROTKB|Q940D3	252	Q940D3 "RNase S-like protein"	0.655	0.535	0.321	7.1e-13

TAIR|locus:2200665 RNS3 "ribonuclease 3" [Arabidopsis thaliana (taxid:3702)]

 Score = 197 (74.4 bits), Expect = 2.0e-21, Sum P(2) = 2.0e-21
 Identities = 45/141 (31%), Positives = 68/141 (48%)

Query:    60 VDKTLPDLMRYWLPLNENNLSRAENFWIYQWKKHGSAAKEFIQPRDYFQMALQLAKDTDL 119
             V   + DL R W  L+  + +    FW ++W+KHG+ A+  +   DYF+  L+L +  +L
Sbjct:    83 VSDLMSDLQREWPTLSCPS-NDGMKFWTHEWEKHGTCAESELDQHDYFEAGLKLKQKANL 141

Query:   120 RNTLQNHGAVPILPDGGSYNKRDYKAAIKNKTGHDPLLKCVKGDDGISHLKEVIICVDDQ 179
              + L N G   I PD   Y  +D +  IK   G  P ++C K     S L ++ +CVD  
Sbjct:   142 LHALTNAG---IKPDDKFYEMKDIENTIKQVVGFAPGIECNKDSSHNSQLYQIYLCVDTS 198

Query:   180 AQSFIQC-AKQKDRCYFDIMF 199
             A  FI C      RC   + F
Sbjct:   199 ASKFINCPVMPHGRCDSRVQF 219

GO:0003723 "RNA binding" evidence=IEA

GO:0004521 "endoribonuclease activity" evidence=ISS

GO:0005576 "extracellular region" evidence=ISM

GO:0033897 "ribonuclease T2 activity" evidence=IEA

GO:0007568 "aging" evidence=IEP

TAIR|locus:2035871 AT1G14220 [Arabidopsis thaliana (taxid:3702)]

 Score = 203 (76.5 bits), Expect = 2.3e-16, P = 2.3e-16
 Identities = 58/179 (32%), Positives = 86/179 (48%)

Query:    26 FWLVQVWPS--GYCLQANCSQTS--DRFIIHGLWAVNVVDKTLPDLMRYWLPLNENNLSR 81
             F +  +WP+  G    +NC   S  DR  I  L  V+ + K  P L     P NE     
Sbjct:    60 FGIHGLWPNYNGGSWPSNCDPDSQFDRSQISDL--VSSLKKNWPTLS---CPSNEGF--- 111

Query:    82 AENFWIYQWKKHGSAAKEFIQPRDYFQMALQLAKDTDLRNTLQNHGAVPILPDGGSYNKR 141
               NFW ++W+KHG+ ++  +   +YF+ AL+L +  +L   L+N G   I PD G YN  
Sbjct:   112 --NFWEHEWEKHGTCSESVMDQHEYFENALKLKQKANLLQILKNSG---INPDDGFYNLD 166

Query:   142 DYKAAIKNKTGHDPLLKCVKGDDGISHLKEVIICVDDQAQSFIQC-AKQKDRCYFDIMF 199
                 AIK+  G  P ++C K  +  + L ++ ICVD     FI+C    +  C   I F
Sbjct:   167 KITNAIKDGIGFTPGIECNKDPERNAQLHQIYICVDTSGTEFIECPVLPRGSCPSQIQF 225

GO:0003723 "RNA binding" evidence=IEA

GO:0004521 "endoribonuclease activity" evidence=ISS

GO:0005576 "extracellular region" evidence=ISM

GO:0033897 "ribonuclease T2 activity" evidence=IEA

TAIR|locus:2056755 RNS1 "ribonuclease 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 193 (73.0 bits), Expect = 2.6e-15, P = 2.6e-15
 Identities = 44/143 (30%), Positives = 68/143 (47%)

Query:    58 NVVDKTLPDLMRYWLPLNENNLSRAENFWIYQWKKHGSAAKEFIQPRDYFQMALQLAKDT 117
             + +   L  + + W P         E FW ++W+KHG+ ++  I   +YFQ AL L + T
Sbjct:    89 STISDLLTSMKKSW-PTLACPSGSGEAFWEHEWEKHGTCSESVIDQHEYFQTALNLKQKT 147

Query:   118 DLRNTLQNHGAVPILPDGGSYNKRDYKAAIKNKTGHDPLLKCVKGDDGISHLKEVIICVD 177
             +L   L   G   I PDG SY+    + +IK   G  P ++C +   G S L +V +CVD
Sbjct:   148 NLLGALTKAG---INPDGKSYSLESIRDSIKESIGFTPWVECNRDGSGNSQLYQVYLCVD 204

Query:   178 DQAQSFIQCAK-QKDRCYFDIMF 199
                   I+C      +C  +I F
Sbjct:   205 RSGSGLIECPVFPHGKCGAEIEF 227

GO:0003723 "RNA binding" evidence=IEA

GO:0004521 "endoribonuclease activity" evidence=ISS

GO:0005576 "extracellular region" evidence=ISM;IDA

GO:0033897 "ribonuclease T2 activity" evidence=IEA

GO:0009611 "response to wounding" evidence=IEP

GO:0009867 "jasmonic acid mediated signaling pathway" evidence=IEP

GO:0005618 "cell wall" evidence=IDA

GO:0005886 "plasma membrane" evidence=IDA

GO:0006865 "amino acid transport" evidence=RCA

GO:0015824 "proline transport" evidence=RCA

GO:0004540 "ribonuclease activity" evidence=IDA

GO:0007568 "aging" evidence=IEP

GO:0016036 "cellular response to phosphate starvation" evidence=IEP

GO:0009718 "anthocyanin-containing compound biosynthetic process" evidence=IMP

ZFIN|ZDB-GENE-030131-2513 rnaset2 "ribonuclease T2" [Danio rerio (taxid:7955)]

 Score = 188 (71.2 bits), Expect = 8.8e-15, P = 8.8e-15
 Identities = 61/208 (29%), Positives = 94/208 (45%)

Query:    20 SSGFDH---FW----LVQVWPSGYCLQANCSQTSDRFIIHGLWA-------------VNV 59
             SS F H    W    L Q WP  +C   +C      + +HGLW               ++
Sbjct:    17 SSAFTHPRGEWTKLILTQHWPQTFCKMEHCKTDFSYWTLHGLWPNTGVRCNTSWHFNASL 76

Query:    60 VDKTLPDLMRYWLPLNENNLSRAENFWIYQWKKHGS-AAK-EFIQPRD-YFQMALQLAKD 116
             ++  LP++ ++W  L E +   +  FW Y+W KHG+ AAK E +     YF  AL+L   
Sbjct:    77 IEDILPEMEKFWPDLLEPS---SPKFWNYEWTKHGTCAAKSESLNSEHKYFGKALELYHK 133

Query:   117 TDLRNTLQNHGAVPILPDGGSYNKRDYKAAIKNKTGHDPLLKCVK-GDDG-ISHLKEVII 174
              DL + L  +    I+P    Y   D + AI +  G  P ++CV  G  G +  L ++ I
Sbjct:   134 FDLNSVLLKN---QIVPSEKHYTLEDVEEAITSAYGVKPKIQCVHPGQGGQVQILGQIEI 190

Query:   175 CVDDQAQSFIQCAKQKDRCYFDIMFDVP 202
             CVD   Q  + C K  +  + + +  VP
Sbjct:   191 CVDRDFQ-LMGCEKSSEDTWSNDLPTVP 217

GO:0033897 "ribonuclease T2 activity" evidence=IEA

GO:0003723 "RNA binding" evidence=IEA

GO:0016075 "rRNA catabolic process" evidence=IMP

GO:0016787 "hydrolase activity" evidence=IEA

GO:0005576 "extracellular region" evidence=IEA

GO:0004518 "nuclease activity" evidence=IEA

GO:0005764 "lysosome" evidence=IEA

GO:0004519 "endonuclease activity" evidence=IEA

GO:0005783 "endoplasmic reticulum" evidence=IEA

GO:0043202 "lysosomal lumen" evidence=IEA

GO:0005788 "endoplasmic reticulum lumen" evidence=IEA

UNIPROTKB|P83618 P83618 "Ribonuclease-like storage protein" [Panax ginseng (taxid:4054)]

 Score = 182 (69.1 bits), Expect = 3.8e-14, P = 3.8e-14
 Identities = 51/174 (29%), Positives = 76/174 (43%)

Query:    32 WPSGYCLQANCSQTS---DRFIIHGLWAVNV-------VDKTLPDL---------MRYWL 72
             WP+G+C   N   T    + F IHGL+  N         D T  D+         M    
Sbjct:    38 WPAGFCEVNNACDTKSLLNTFTIHGLYPYNAKGTPALYCDGTAFDVNSVSDFLAEMHLAW 97

Query:    73 PLNENNLSRAENFWIYQWKKHGSAAKEFIQPRDYFQMALQLAKDTDLRNTLQNHGAVPIL 132
             P +E N    + FW ++WKKHG  ++  ++  DYF+ AL   K  D+   L   G   I 
Sbjct:    98 PSHETNTEDIQ-FWEHEWKKHGRCSEALLKQTDYFRTALAFRKAFDIVGLLNQEG---IY 153

Query:   133 PDGGSYNKRDYKAAIKNKTGHDPLLKCVKGDDGISHLKEVIICVDDQAQSFIQC 186
             P+   Y  +  K AIK      P +   K ++    L ++ +CV+ QA  F+ C
Sbjct:   154 PNNDLYRPKMIKEAIKKHLNAVPEIDFTKNENSEYVLTDINVCVNQQATRFVDC 207

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

UNIPROTKB|Q7M329 RNASET2 "Ribonuclease T2" [Sus scrofa (taxid:9823)]

 Score = 179 (68.1 bits), Expect = 7.9e-14, P = 7.9e-14
 Identities = 53/196 (27%), Positives = 86/196 (43%)

Query:    28 LVQVWPSGYCLQANCSQTSDRFIIHGLWA-------------VNVVDKTLPDLMRYWLPL 74
             +V  WP   C + NC    D + IHGLW               + +   LPD+  YW  +
Sbjct:     8 MVHHWPMTVCNEKNCEHPPDYWTIHGLWPDKSGECNRSWPFNPDEIKGLLPDMRLYWPDV 67

Query:    75 NENNLSRAENFWIYQWKKHGSAAKEFI---QPRDYFQMALQLAKDTDLRNTLQNHGAVPI 131
               ++ + + +FW ++W+KHG+ A +       R YF   L L K+  L +TLQ  G   I
Sbjct:    68 LHSSPNHSVHFWRHEWEKHGTCAAQLDALNSQRKYFGKTLDLYKELALNSTLQKLG---I 124

Query:   132 LPDGGSYNKRDYKAAIKNKTGHDPLLKCV--KGDDGISHLKEVIICVDDQAQSFIQCAKQ 189
              P    Y   D K A+    G  P ++C+  K  + +  L ++ +C+    Q    C + 
Sbjct:   125 KPSISYYQISDIKHALVGVYGVVPKVQCLPPKSGEKVQTLGQIELCLTRDLQ-LQDCPEP 183

Query:   190 K-DRCYFDIMFDVPPR 204
               + C    +F  PP+
Sbjct:   184 GLEICEDGPVFYPPPK 199

GO:0005788 "endoplasmic reticulum lumen" evidence=ISS

GO:0005764 "lysosome" evidence=ISS

GO:0005615 "extracellular space" evidence=ISS

GO:0004540 "ribonuclease activity" evidence=ISS

GO:0006401 "RNA catabolic process" evidence=ISS

GO:0043202 "lysosomal lumen" evidence=IEA

GO:0033897 "ribonuclease T2 activity" evidence=IEA

GO:0003723 "RNA binding" evidence=IEA

UNIPROTKB|D6REQ6 RNASET2 "Ribonuclease T2" [Homo sapiens (taxid:9606)]

 Score = 177 (67.4 bits), Expect = 1.3e-13, P = 1.3e-13
 Identities = 48/181 (26%), Positives = 82/181 (45%)

Query:    28 LVQVWPSGYC--LQANCSQTSDRFIIHGLWA-----------VNV--VDKTLPDLMRYWL 72
             +VQ WP   C  +Q +C    D + IHGLW             N+  +   LP++  YW 
Sbjct:     1 MVQHWPETVCEKIQNDCRDPPDYWTIHGLWPDKSEGCNRSWPFNLEEIKDLLPEMRAYW- 59

Query:    73 PLNENNLSRAENFWIYQWKKHGSAAKE---FIQPRDYFQMALQLAKDTDLRNTLQNHGAV 129
             P   ++      FW ++W+KHG+ A +       + YF  +L+L ++ DL + L   G  
Sbjct:    60 PDVIHSFPNRSRFWKHEWEKHGTCAAQVDALNSQKKYFGRSLELYRELDLNSVLLKLG-- 117

Query:   130 PILPDGGSYNKRDYKAAIKNKTGHDPLLKCV--KGDDGISHLKEVIICVDDQAQSFIQCA 187
              I P    Y   D+K A+    G  P ++C+    D+ +  + ++ +C+  Q Q    C 
Sbjct:   118 -IKPSINYYQVADFKDALARVYGVIPKIQCLPPSQDEEVQTIGQIELCLTKQDQQLQNCT 176

Query:   188 K 188
             +
Sbjct:   177 E 177

GO:0003723 "RNA binding" evidence=IEA

GO:0033897 "ribonuclease T2 activity" evidence=IEA

UNIPROTKB|D6RHI9 RNASET2 "Ribonuclease T2" [Homo sapiens (taxid:9606)]

 Score = 177 (67.4 bits), Expect = 1.3e-13, P = 1.3e-13
 Identities = 48/181 (26%), Positives = 82/181 (45%)

Query:    28 LVQVWPSGYC--LQANCSQTSDRFIIHGLWA-----------VNV--VDKTLPDLMRYWL 72
             +VQ WP   C  +Q +C    D + IHGLW             N+  +   LP++  YW 
Sbjct:    39 MVQHWPETVCEKIQNDCRDPPDYWTIHGLWPDKSEGCNRSWPFNLEEIKDLLPEMRAYW- 97

Query:    73 PLNENNLSRAENFWIYQWKKHGSAAKE---FIQPRDYFQMALQLAKDTDLRNTLQNHGAV 129
             P   ++      FW ++W+KHG+ A +       + YF  +L+L ++ DL + L   G  
Sbjct:    98 PDVIHSFPNRSRFWKHEWEKHGTCAAQVDALNSQKKYFGRSLELYRELDLNSVLLKLG-- 155

Query:   130 PILPDGGSYNKRDYKAAIKNKTGHDPLLKCV--KGDDGISHLKEVIICVDDQAQSFIQCA 187
              I P    Y   D+K A+    G  P ++C+    D+ +  + ++ +C+  Q Q    C 
Sbjct:   156 -IKPSINYYQVADFKDALARVYGVIPKIQCLPPSQDEEVQTIGQIELCLTKQDQQLQNCT 214

Query:   188 K 188
             +
Sbjct:   215 E 215

GO:0003723 "RNA binding" evidence=IEA

GO:0033897 "ribonuclease T2 activity" evidence=IEA

UNIPROTKB|O00584 RNASET2 "Ribonuclease T2" [Homo sapiens (taxid:9606)]

 Score = 177 (67.4 bits), Expect = 1.3e-13, P = 1.3e-13
 Identities = 48/181 (26%), Positives = 82/181 (45%)

Query:    28 LVQVWPSGYC--LQANCSQTSDRFIIHGLWA-----------VNV--VDKTLPDLMRYWL 72
             +VQ WP   C  +Q +C    D + IHGLW             N+  +   LP++  YW 
Sbjct:    39 MVQHWPETVCEKIQNDCRDPPDYWTIHGLWPDKSEGCNRSWPFNLEEIKDLLPEMRAYW- 97

Query:    73 PLNENNLSRAENFWIYQWKKHGSAAKE---FIQPRDYFQMALQLAKDTDLRNTLQNHGAV 129
             P   ++      FW ++W+KHG+ A +       + YF  +L+L ++ DL + L   G  
Sbjct:    98 PDVIHSFPNRSRFWKHEWEKHGTCAAQVDALNSQKKYFGRSLELYRELDLNSVLLKLG-- 155

Query:   130 PILPDGGSYNKRDYKAAIKNKTGHDPLLKCV--KGDDGISHLKEVIICVDDQAQSFIQCA 187
              I P    Y   D+K A+    G  P ++C+    D+ +  + ++ +C+  Q Q    C 
Sbjct:   156 -IKPSINYYQVADFKDALARVYGVIPKIQCLPPSQDEEVQTIGQIELCLTKQDQQLQNCT 214

Query:   188 K 188
             +
Sbjct:   215 E 215

GO:0003723 "RNA binding" evidence=IEA

GO:0033897 "ribonuclease T2 activity" evidence=IEA

GO:0043202 "lysosomal lumen" evidence=IEA

GO:0005576 "extracellular region" evidence=TAS

GO:0004540 "ribonuclease activity" evidence=IDA

GO:0006401 "RNA catabolic process" evidence=IDA

GO:0005615 "extracellular space" evidence=IDA

GO:0005788 "endoplasmic reticulum lumen" evidence=IDA

GO:0005764 "lysosome" evidence=IDA

UNIPROTKB|Q940D3 Q940D3 "RNase S-like protein" [Oryza sativa (taxid:4530)]

 Score = 170 (64.9 bits), Expect = 7.1e-13, P = 7.1e-13
 Identities = 47/146 (32%), Positives = 67/146 (45%)

Query:    57 VNVVDKTLPDLMRYWLPLNENNLSRAENFWIYQWKKHG--SAAKEFIQPRDYFQMALQLA 114
             +N +D    +L  YW  +         N W  +W  +G  S  KE     DYF+  LQL 
Sbjct:    90 INKLDSIENNLNHYWSNIKCPRTDGV-NSWKSEWNSYGVCSGLKEL----DYFKAGLQLR 144

Query:   115 KDTDLRNTLQNHGAVPILPDGGSYNKRDYKAAIKNKTGHDPLLKCVKGDDGISHLKEVII 174
             K+ D+ + L   G   I PD   YN    K A+  K G  P ++C  G  G   L E+ +
Sbjct:   145 KNADVLSALAEQG---IKPDYQLYNTAFIKWAVNQKLGVTPGVQCRDGPFGKKQLYEIYL 201

Query:   175 CVDDQAQSFIQCAKQKD-RCYFDIMF 199
             CVD  A+SFI C    +  C  +++F
Sbjct:   202 CVDKDAKSFIDCPVLPNLSCPAEVLF 227

GO:0003723 "RNA binding" evidence=ISS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
P42813	RNS1_ARATH	3, ., 1, ., 2, 7, ., 1	0.3073	0.9466	0.8478	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	3.1.27.1	0.824
3rd Layer	3.1.27	0.766

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	206
cd01061	195	cd01061, RNase_T2_euk, Ribonuclease T2 (RNase T2)	7e-40
cd00374	195	cd00374, RNase_T2, Ribonuclease T2 (RNase T2) is a	1e-36
pfam00445	182	pfam00445, Ribonuclease_T2, Ribonuclease T2 family	2e-36
COG3719	249	COG3719, Rna, Ribonuclease I [Translation, ribosom	4e-06
cd01062	184	cd01062, RNase_T2_prok, Ribonuclease T2 (RNase T2)	1e-04

>gnl|CDD|238512 cd01061, RNase_T2_euk, Ribonuclease T2 (RNase T2) is a widespread family of secreted RNases found in every organism examined thus far

 Score =  134 bits (340), Expect = 7e-40
 Identities = 61/194 (31%), Positives = 82/194 (42%), Gaps = 29/194 (14%)

Query: 23  FDHFWLVQVWPSGYCLQANCSQT---SDRFIIHGLW------------------AVNVVD 61
           FD+  LV  WP  YC    C       D F IHGLW                     ++ 
Sbjct: 1   FDYLQLVLQWPDTYCSTGPCCCRPPPPDSFTIHGLWPDNCSGTYPQFCDSSSNFDSILIS 60

Query: 62  KTLPDLMRYWLPLNENNLSRAENFWIYQWKKHGSAAKEFIQ-PRDYFQMALQLAKDTDLR 120
             L +L +YW  L     +  ++FW ++W KHG+ +   +    DYF  AL+L    DL 
Sbjct: 61  DLLNELNKYWPDLTGPKNN--QSFWEHEWNKHGTCSSTLLYNQYDYFDTALKLKDKLDLL 118

Query: 121 NTLQNHGAVPILPDGGSYNKRDYKAAIKNKTGHDPLLKCVKGDDGISHLKEVIICVDDQA 180
             L   G   I+P   +Y   D + AIK  TG  P++KC   D G   L E+ IC D + 
Sbjct: 119 KILAKAG---IVPSTQTYTLSDIQNAIKAATGVTPVIKC-SKDPGKGELNEIWICFDKKG 174

Query: 181 QSFIQC-AKQKDRC 193
             FI C    K  C
Sbjct: 175 GEFIDCPRPPKSTC 188

This family includes RNase Rh, RNase MC1, RNase LE, and self-incompatibility RNases (S-RNases). Plant T2 RNases are expressed during leaf senescence in order to scavenge phosphate from ribonucleotides. They are also expressed in response to wounding or pathogen invasion. S-RNases are thought to prevent self-fertilization by acting as selective cytotoxins of "self" pollen. Generally, RNases have two distinct binding sites: the primary site (B1 site) and the subsite (B2 site), for nucleotides located at the 5'- and 3'- terminal ends of the sessil bond, respectively. This CD includes the eukaryotic RNase T2 family members. Length = 195

>gnl|CDD|238220 cd00374, RNase_T2, Ribonuclease T2 (RNase T2) is a widespread family of secreted RNases found in every organism examined thus far

 Score =  126 bits (318), Expect = 1e-36
 Identities = 61/194 (31%), Positives = 79/194 (40%), Gaps = 29/194 (14%)

Query: 23  FDHFWLVQVWPSGYCLQANCSQTSDR----FIIHGLW------------------AVNVV 60
           FD++ LV  WP  +C    C          F IHGLW                    +  
Sbjct: 1   FDYYVLVLQWPPTFCATGPCKCCGTPPPDSFTIHGLWPDNCDGTYPQFCDSSSFFDKSKD 60

Query: 61  DKTLPDLMRYWLPLNENNLSRAENFWIYQWKKHGSAAKEFIQPRDYFQMALQLAKDTDLR 120
              L +L +YW  L         +FW ++W KHG+ +   +   DYF+ AL+L    DL 
Sbjct: 61  SDLLDELNKYWPDLMPGK---DSSFWKHEWNKHGTCSGTLLDQDDYFRTALKLLDKLDLL 117

Query: 121 NTLQNHGAVPILPDGGSYNKRDYKAAIKNKTGHDPLLKCVKGDDGISHLKEVIICVDDQA 180
           + L   G  P   DG +Y     + AIK  TG  P LKC   D G   L E+ IC D  A
Sbjct: 118 SILAKAGIKPS--DGSTYTLAFIQNAIKAATGATPSLKC-TKDPGKGLLTEIWICFDKDA 174

Query: 181 QSFIQC-AKQKDRC 193
             FI C    K  C
Sbjct: 175 LKFIDCPTPGKSTC 188

This family includes RNase Rh, RNase MC1, RNase LE, and self-incompatibility RNases (S-RNases). Plant T2 RNases are expressed during leaf senescence in order to scavenge phosphate from ribonucleotides. They are also expressed in response to wounding or pathogen invasion. S-RNases are thought to prevent self-fertilization by acting as selective cytotoxins of "self" pollen. Length = 195

>gnl|CDD|215923 pfam00445, Ribonuclease_T2, Ribonuclease T2 family

 Score =  125 bits (316), Expect = 2e-36
 Identities = 57/186 (30%), Positives = 85/186 (45%), Gaps = 28/186 (15%)

Query: 23  FDHFWLVQVWPSGYCLQAN---CSQTSDRFIIHGLW------------------AVNVVD 61
           FD++ L   WP  +C            D F IHGLW                    +++ 
Sbjct: 1   FDYYVLALSWPPSFCETCKKCCGPGPPDGFTIHGLWPDYDGGSYPQNCQGSSNFDNSLIS 60

Query: 62  KTLPDLMRYWLPLNENNLSRAENFWIYQWKKHGSAAKEFIQPRDYFQMALQLAKDTDLRN 121
             L  L+ YW P   +    +++ W ++W+KHG+ A   +   DYF  AL+L    +L +
Sbjct: 61  DLLDKLLTYW-P---SLTGNSQSLWKHEWEKHGTCALSGLSQDDYFSKALKLKDKLNLLD 116

Query: 122 TLQNHGAVPILPDGGSYNKRDYKAAIKNKTGHDPLLKCVKGD-DGISHLKEVIICVDDQA 180
            L + G  P   DG +Y   + + A+K  TG  P LKC +GD +GI +L EV IC+D   
Sbjct: 117 ILASAGIKP--SDGKTYTLSEIENALKKATGKAPTLKCTRGDKNGIQYLTEVRICLDKDL 174

Query: 181 QSFIQC 186
              I C
Sbjct: 175 FIPIDC 180

Length = 182

>gnl|CDD|226242 COG3719, Rna, Ribonuclease I [Translation, ribosomal structure and biogenesis]

 Score = 45.9 bits (109), Expect = 4e-06
 Identities = 41/192 (21%), Positives = 69/192 (35%), Gaps = 30/192 (15%)

Query: 21  SGFDHFWLVQVWPSGYC--------LQANCSQTS-DRFIIHGLWAVNVVDKTLPDLMRY- 70
            GFD + L   W  G+C         +  C       F +HGLW  N   + + D  R+ 
Sbjct: 51  DGFDFYVLALSWSPGFCESQHDPDECRLQCETNRAFGFTVHGLWPQNENGRAVRDYPRFC 110

Query: 71  ----WLPLNENNLSR------AENFWIYQWKKHGSAAKEFIQPRDYFQMALQLAKDTDLR 120
               W  L E   S+            ++W+KHG+ +   +    YF    +      L 
Sbjct: 111 RGRPWPRLPEVIASQLLDVMPGAGLERHEWRKHGTCS--GLSQEAYFATTRR------LF 162

Query: 121 NTLQNHGAVPILPDGGSYNKRDYKAAIKNKTGHDPLLKCVKGDDGISHLKEVIICVDDQA 180
             L+      +L DG + ++ + + A     G       V+     ++L E+ IC+D   
Sbjct: 163 EELKLPPVRKLLADGKTLSRDEIEQAFDKANGGLK-GDAVRVSCQGNYLTELRICLDKDL 221

Query: 181 QSFIQCAKQKDR 192
           Q    C     +
Sbjct: 222 Q-NAACLADLPQ 232

Length = 249

>gnl|CDD|238513 cd01062, RNase_T2_prok, Ribonuclease T2 (RNase T2) is a widespread family of secreted RNases found in every organism examined thus far

 Score = 41.2 bits (97), Expect = 1e-04
 Identities = 42/192 (21%), Positives = 60/192 (31%), Gaps = 47/192 (24%)

Query: 23  FDHFWLVQVWPSGYCL------QANCSQTSDR--FIIHGLWAVNVVDKTLPDLMRYWLPL 74
           FD++ L   W  G+C       +     T D   F +HGLW         P    Y    
Sbjct: 1   FDYYVLALSWQPGFCATQGDRPECATCGTLDAYGFTLHGLWP-QKPKGGWP---EYCGVT 56

Query: 75  NENNLSRAE-----------NFWIYQWKKHGSAAKEFIQPRDYFQMALQLA---KDTDLR 120
           +E  LS                  ++W+KHG+ +   + P  YF  A  L    K     
Sbjct: 57  SEPPLSEETRSRLLDVMPASGLIRHEWRKHGTCS--GLDPDAYFAKARNLREALKIPPEL 114

Query: 121 NTLQNHGAVPILPDGGSYNKRDYKAAIKNKTGHDP----LLKCVKGDDGISHLKEVIICV 176
             L  +  V            + + A        P     + C  G      L EV IC+
Sbjct: 115 RLLAGNIGVT---------ASEIRQAFIKANPGLPPDAVSVSCQGG-----LLTEVRICL 160

Query: 177 DDQAQSFIQCAK 188
            D+   F  C  
Sbjct: 161 -DKDLKFAACPT 171

This family includes RNase Rh, RNase MC1, RNase LE, and self-incompatibility RNases (S-RNases). Plant T2 RNases are expressed during leaf senescence in order to scavenge phosphate from ribonucleotides. They are also expressed in response to wounding or pathogen invasion. S-RNases are thought to prevent self-fertilization by acting as selective cytotoxins of "self" pollen. Generally, RNases have two distinct binding sites: the primary site (B1 site) and the subsite (B2 site), for nucleotides located at the 5'- and 3'- terminal ends of the sessil bond, respectively. This CD includes the prokaryotic RNase T2 family members. Length = 184

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	206
cd01061	195	RNase_T2_euk Ribonuclease T2 (RNase T2) is a wides	100.0
KOG1642	263	consensus Ribonuclease, T2 family [RNA processing	100.0
cd00374	195	RNase_T2 Ribonuclease T2 (RNase T2) is a widesprea	100.0
PF00445	189	Ribonuclease_T2: Ribonuclease T2 family; InterPro:	100.0
cd01062	184	RNase_T2_prok Ribonuclease T2 (RNase T2) is a wide	100.0
PRK10095	268	ribonuclease I; Provisional	100.0
COG3719	249	Rna Ribonuclease I [Translation, ribosomal structu	100.0

>cd01061 RNase_T2_euk Ribonuclease T2 (RNase T2) is a widespread family of secreted RNases found in every organism examined thus far

Probab=100.00  E-value=1.8e-52  Score=343.83  Aligned_cols=171  Identities=37%  Similarity=0.753  Sum_probs=149.1

Q ss_pred             ccEEEEEEecccccccCCC--CCCC-CCCcEEeeeecccc------------------CCCcchhhhcccCcCcCCCchh
Q 042583           23 FDHFWLVQVWPSGYCLQAN--CSQT-SDRFIIHGLWAVNV------------------VDKTLPDLMRYWLPLNENNLSR   81 (206)
Q Consensus        23 fD~~~l~l~W~p~~C~~~~--C~~p-~~~ftIHGLWP~~~------------------~~~l~~~L~~~Wp~l~~~~~~~   81 (206)
                      ||||+||++|||+||..+.  |..+ ..+||||||||++.                  ++++.++|+.+||++...+.+ 
T Consensus         1 ~d~~~l~~~Wpps~C~~~~~~c~~~~~~~ftiHGLWP~~~~g~~p~~C~~~~~~~~~~~~~l~~~L~~~Wp~l~~~~~~-   79 (195)
T cd01061           1 FDYLQLVLQWPDTYCSTGPCCCRPPPPDSFTIHGLWPDNCSGTYPQFCDSSSNFDSILISDLLNELNKYWPDLTGPKNN-   79 (195)
T ss_pred             CCeEEEEEECCCCcccCCCCcCCCCCcccCEEeccCCCCCCCCCCCCCCCcccCCcccchhhhHHHhccCCCCcCCCCc-
Confidence            7999999999999998765  7443 89999999999875                  236888999999999876411 


Q ss_pred             hHhHHhhhccceeecccC-CCCHHHHHHHHHHHHHhCChHHHHhhCCCCCCCCCCCcccHHHHHHHHHHhhCCCceEEee
Q 042583           82 AENFWIYQWKKHGSAAKE-FIQPRDYFQMALQLAKDTDLRNTLQNHGAVPILPDGGSYNKRDYKAAIKNKTGHDPLLKCV  160 (206)
Q Consensus        82 ~~~fW~hEW~KHGtCs~~-~~~~~~YF~~al~l~~~~~i~~~L~~~gI~Ps~~~~~~y~~~~i~~ai~~~~g~~p~l~C~  160 (206)
                      . .||+|||+|||||++. ..++.+||.+|++|++++|+.++|+++||+|   +++.|++++|++||++++|.+|.|+|.
T Consensus        80 ~-~fw~hEW~KHGTC~~~~~~~~~~YF~~a~~l~~~~~~~~~L~~~~I~P---~~~~~~~~~i~~ai~~~~g~~~~l~C~  155 (195)
T cd01061          80 Q-SFWEHEWNKHGTCSSTLLYNQYDYFDTALKLKDKLDLLKILAKAGIVP---STQTYTLSDIQNAIKAATGVTPVIKCS  155 (195)
T ss_pred             c-hHHHHHHhhCcEeCCCcccCHHHHHHHHHHHHHHCCHHHHHHHCCcCC---CCcEEcHHHHHHHHHHHHCCCcEEEeC
Confidence            2 8999999999999985 4699999999999999999999999999999   368999999999999999999999998


Q ss_pred             eCCCCCCcEEEEEEEEecCCCceecCCCCCCC-CC-CceEe
Q 042583          161 KGDDGISHLKEVIICVDDQAQSFIQCAKQKDR-CY-FDIMF  199 (206)
Q Consensus       161 ~~~~~~~~L~Ev~iC~~~~~~~~i~Cp~~~~~-C~-~~i~~  199 (206)
                      +++ +.++|.||+||+|+++..+++||..... || ++|+|
T Consensus       156 ~~~-~~~~L~Ev~iC~~k~~~~~~~C~~~~~~~C~~~~i~f  195 (195)
T cd01061         156 KDP-GKGELNEIWICFDKKGGEFIDCPRPPKSTCPDDGIKF  195 (195)
T ss_pred             cCC-CCcEEEEEEEEEECCCCeEeeCCCCCCCCCCCCceEC
Confidence            854 4589999999999995459999987433 99 57775

This family includes RNase Rh, RNase MC1, RNase LE, and self-incompatibility RNases (S-RNases). Plant T2 RNases are expressed during leaf senescence in order to scavenge phosphate from ribonucleotides. They are also expressed in response to wounding or pathogen invasion. S-RNases are thought to prevent self-fertilization by acting as selective cytotoxins of "self" pollen. Generally, RNases have two distinct binding sites: the primary site (B1 site) and the subsite (B2 site), for nucleotides located at the 5'- and 3'- terminal ends of the sessil bond, respectively. This CD includes the eukaryotic RNase T2 family members.

>KOG1642 consensus Ribonuclease, T2 family [RNA processing and modification]

Probab=100.00  E-value=1.9e-52  Score=347.79  Aligned_cols=182  Identities=30%  Similarity=0.603  Sum_probs=157.6

Q ss_pred             CCCCccEEEEEEecccccccCCC--CCCC---CCCcEEeeeecccc------------------CCCcchhhhcccCcCc
Q 042583           19 DSSGFDHFWLVQVWPSGYCLQAN--CSQT---SDRFIIHGLWAVNV------------------VDKTLPDLMRYWLPLN   75 (206)
Q Consensus        19 ~~~~fD~~~l~l~W~p~~C~~~~--C~~p---~~~ftIHGLWP~~~------------------~~~l~~~L~~~Wp~l~   75 (206)
                      ...+||||+|+|+||.++|...+  |..|   ...||||||||++.                  +.+++.+|+++||+|.
T Consensus        28 ~~~~fd~f~fvqqWP~~~Cd~~~~~C~~~~G~~a~ftIHGLWP~~~~G~~P~~Cn~s~~Fd~~~isdl~~~L~~~Wp~L~  107 (263)
T KOG1642|consen   28 SEEDFDFFYFVQQWPGAYCDSQRTCCYPPSGKPADFTIHGLWPDYNHGSWPQNCNRSSQFDDSKISDLEDSLEKEWPDLY  107 (263)
T ss_pred             ccCCCCEEEEEEecCCccccCCccccCCCCCCccceEEeeeccCCCCCCCcccCCCcccCChHHccchhhhHHhhccccc
Confidence            34799999999999999997665  8776   34999999999986                  6788999999999999


Q ss_pred             CCCchh-hHhHHhhhccceeecccCCC---CHHHHHHHHHHHHHhCChHHHHhhCCCCCCCCCCCcccHHHHHHHHHHhh
Q 042583           76 ENNLSR-AENFWIYQWKKHGSAAKEFI---QPRDYFQMALQLAKDTDLRNTLQNHGAVPILPDGGSYNKRDYKAAIKNKT  151 (206)
Q Consensus        76 ~~~~~~-~~~fW~hEW~KHGtCs~~~~---~~~~YF~~al~l~~~~~i~~~L~~~gI~Ps~~~~~~y~~~~i~~ai~~~~  151 (206)
                      .+.+++ .++||+|||+|||||+.+++   +|.+||.++++|++++|+..+|.++||.|   ++..|++++|++||++++
T Consensus       108 ~~s~n~g~~~fW~HEweKHGTCa~sv~~~~dq~~YF~~~L~l~~k~~l~~~L~~~gI~p---~~~~y~l~~I~nAi~~~~  184 (263)
T KOG1642|consen  108 CPSPNGGHESFWKHEWEKHGTCASSVFPLCDQHKYFETTLKLKQKLDLLSILKKAGIKP---DDNFYSLADIKNAIKEAI  184 (263)
T ss_pred             cCCCCCccchhhhhhhhccCchhhhhhhhhhHHHHHHHHHHHHHHHhHHHHHHHcCCCC---CCCceeHHHHHHHHHHHh
Confidence            876433 22899999999999999877   99999999999999999999999999999   599999999999999999


Q ss_pred             CCCceEEeeeCCCCC-CcEEEEEEEEecCCC--ceecCCCC-CC-CCCCceEecCCC
Q 042583          152 GHDPLLKCVKGDDGI-SHLKEVIICVDDQAQ--SFIQCAKQ-KD-RCYFDIMFDVPP  203 (206)
Q Consensus       152 g~~p~l~C~~~~~~~-~~L~Ev~iC~~~~~~--~~i~Cp~~-~~-~C~~~i~~P~~~  203 (206)
                      |.+|.+.|.++.+++ .+|.|||+||.|+..  ..+.||.. .+ .|++.+.||.+.
T Consensus       185 G~~p~I~C~rd~~~nv~~l~qI~lCl~kd~~~~d~~~~~~~~P~g~~~~~~~~ps~~  241 (263)
T KOG1642|consen  185 GKTPGIECLRDSKHNVSQLGQIRLCLLKDFSPRDCIECPTEFPRGSCPTFIQFPSFG  241 (263)
T ss_pred             CCCCceEeccCcccCceEeeeEEEEeecCcccccccCCCCcccCCcccccccCCCCC
Confidence            999999999987766 799999999977765  33445522 23 399999998865

>cd00374 RNase_T2 Ribonuclease T2 (RNase T2) is a widespread family of secreted RNases found in every organism examined thus far

Probab=100.00  E-value=5e-52  Score=340.02  Aligned_cols=171  Identities=37%  Similarity=0.731  Sum_probs=150.2

Q ss_pred             ccEEEEEEecccccccCCC--CCC--CCCCcEEeeeecccc------------------CCCcchhhhcccCcCcCCCch
Q 042583           23 FDHFWLVQVWPSGYCLQAN--CSQ--TSDRFIIHGLWAVNV------------------VDKTLPDLMRYWLPLNENNLS   80 (206)
Q Consensus        23 fD~~~l~l~W~p~~C~~~~--C~~--p~~~ftIHGLWP~~~------------------~~~l~~~L~~~Wp~l~~~~~~   80 (206)
                      ||||+|||+|||+||....  |..  +..+||||||||++.                  +.++.++|.++||++..+.. 
T Consensus         1 ~d~~~l~l~W~p~~C~~~~~~~~~~~~~~~ftiHGLWP~~~~g~~p~~C~~~~~~~~~~~~~l~~~l~~~w~~~~~~~~-   79 (195)
T cd00374           1 FDYYVLVLQWPPTFCATGPCKCCGTPPPDSFTIHGLWPDNCDGTYPQFCDSSSFFDKSKDSDLLDELNKYWPDLMPGKD-   79 (195)
T ss_pred             CCeEEEEEeCcCCcccCCCCCCCCCCchHHeeEccccCCCCCCCCCCCCCCCccccccccHHHHHHHHhhCcccCCCCC-
Confidence            7999999999999998765  422  378999999999874                  13578899999999987632 


Q ss_pred             hhHhHHhhhccceeecccCCCCHHHHHHHHHHHHHhCChHHHHhhCCCCCCCCCCCcccHHHHHHHHHHhhCCCceEEee
Q 042583           81 RAENFWIYQWKKHGSAAKEFIQPRDYFQMALQLAKDTDLRNTLQNHGAVPILPDGGSYNKRDYKAAIKNKTGHDPLLKCV  160 (206)
Q Consensus        81 ~~~~fW~hEW~KHGtCs~~~~~~~~YF~~al~l~~~~~i~~~L~~~gI~Ps~~~~~~y~~~~i~~ai~~~~g~~p~l~C~  160 (206)
                       . .||+|||+|||||+++..++.+||++|++|++++|+.++|+.+||+|+  +++.|+.++|++||++++|.+|.|+|.
T Consensus        80 -~-~fw~hEW~KHGTC~~~~~~~~~YF~~a~~l~~~~ni~~~L~~~~i~p~--~~~~~~~~~i~~ai~~~~g~~~~l~C~  155 (195)
T cd00374          80 -S-SFWKHEWNKHGTCSGTLLDQDDYFRTALKLLDKLDLLSILAKAGIKPS--DGSTYTLAFIQNAIKAATGATPSLKCT  155 (195)
T ss_pred             -c-hHHHHHHhcCceecCCcCCHHHHHHHHHHHHHhCCHHHHHHHCCCcCC--CCceecHHHHHHHHHHHHCCCcEEEec
Confidence             2 899999999999999778999999999999999999999999999997  689999999999999999999999998


Q ss_pred             eCCCCCCcEEEEEEEEecCCCceecCCCCC-CCCC-CceEe
Q 042583          161 KGDDGISHLKEVIICVDDQAQSFIQCAKQK-DRCY-FDIMF  199 (206)
Q Consensus       161 ~~~~~~~~L~Ev~iC~~~~~~~~i~Cp~~~-~~C~-~~i~~  199 (206)
                      +++ |+++|.||+||+|+++..+++||... +.|| ..|+|
T Consensus       156 ~~~-~~~~L~Ev~iC~~~~~~~~~~C~~~~~~~C~~~~i~~  195 (195)
T cd00374         156 KDP-GKGLLTEIWICFDKDALKFIDCPTPGKSTCPADGIKF  195 (195)
T ss_pred             cCC-CCcEEEEEEEEEECCCCeEEeCCCCCCCCCCCCcEEC
Confidence            865 56899999999999944599999874 3499 67765

This family includes RNase Rh, RNase MC1, RNase LE, and self-incompatibility RNases (S-RNases). Plant T2 RNases are expressed during leaf senescence in order to scavenge phosphate from ribonucleotides. They are also expressed in response to wounding or pathogen invasion. S-RNases are thought to prevent self-fertilization by acting as selective cytotoxins of "self" pollen.

>PF00445 Ribonuclease_T2: Ribonuclease T2 family; InterPro: IPR001568 The fungal ribonucleases T2 from Aspergillus oryzae, M from Aspergillus saitoi and Rh from Rhizopus niveus are structurally and functionally related 30 Kd glycoproteins [] that cleave the 3'-5' internucleotide linkage of RNA via a nucleotide 2',3'-cyclic phosphate intermediate (3

Probab=100.00  E-value=7.6e-52  Score=338.19  Aligned_cols=161  Identities=35%  Similarity=0.744  Sum_probs=139.9

Q ss_pred             ccEEEEEEecccccccC--CCCCCC-CCCcEEeeeecccc-------------------CC---CcchhhhcccCcCcCC
Q 042583           23 FDHFWLVQVWPSGYCLQ--ANCSQT-SDRFIIHGLWAVNV-------------------VD---KTLPDLMRYWLPLNEN   77 (206)
Q Consensus        23 fD~~~l~l~W~p~~C~~--~~C~~p-~~~ftIHGLWP~~~-------------------~~---~l~~~L~~~Wp~l~~~   77 (206)
                      ||||+|||+|||+||..  .+|..+ ..+||||||||++.                   +.   ++..+|+++||++..+
T Consensus         1 fD~~~l~~~W~p~~C~~~~~~C~~~~~~~ftIHGLWP~~~~~~~~p~~C~~~~~~~~~~~~~~~~~~~~L~~~Wp~~~~~   80 (189)
T PF00445_consen    1 FDYYVLALQWPPSFCSTNSPQCKPPPPNNFTIHGLWPSNCDGGTYPQNCNSSPNFDNSNLSNPPELKSELDKYWPDLKNS   80 (189)
T ss_dssp             -SEEEEEEEEHHHHTSSSSSCHSSSSTSSEEEEEEEEETTTSSSCCCSSSTTTTTSGGGGGH-HGGHHHHHHHSTBSSSS
T ss_pred             CeEEEEEEEeCchhcCCCCCcCCCCCCcceEEecccCCCCCCCCCcceecCccccccccchhhhHHhhhhhhhhhhhccc
Confidence            89999999999999974  349754 89999999999953                   22   6788999999999876


Q ss_pred             CchhhHhHHhhhccceeecccCC-CCHHHHHHHHHHHHHhCChHHHHhhCCCCCCCCCCCcccHHHHHHHHHHhh-CCCc
Q 042583           78 NLSRAENFWIYQWKKHGSAAKEF-IQPRDYFQMALQLAKDTDLRNTLQNHGAVPILPDGGSYNKRDYKAAIKNKT-GHDP  155 (206)
Q Consensus        78 ~~~~~~~fW~hEW~KHGtCs~~~-~~~~~YF~~al~l~~~~~i~~~L~~~gI~Ps~~~~~~y~~~~i~~ai~~~~-g~~p  155 (206)
                      +.  . .||+|||.|||||++.. .++.+||++|++|++++|+.++|+++||+|+  .++.|++++|++||++++ |..|
T Consensus        81 ~~--~-~fw~hEW~KHGtC~~~~~~~~~~YF~~a~~l~~~~~~~~~L~~~gI~p~--~~~~~~~~~i~~al~~~~~~~~~  155 (189)
T PF00445_consen   81 NS--E-SFWKHEWEKHGTCSGMDFIDQYDYFSTALKLYKKLNLPKILANAGIVPS--NGKTYSLSDIRDALKQAFNGVRP  155 (189)
T ss_dssp             HH--H-HHHHHHHHHTGGGGTTTSSSHHHHHHHHHHHHHHCHHHHHHHHTTHCSC--SSEEEEHHHHHHHHHHHHTSSGE
T ss_pred             hh--h-hhHHhcceeeeEEcCCchhhHHHHHHHHHHHHHhccchHHHhhcccCCC--ccccccHHHHHHHHHHHcCCCce
Confidence            53  2 89999999999999942 2399999999999999999999999999997  678999999999999999 9999


Q ss_pred             eEEeeeC-CCCCCcEEEEEEEEecCCCceecCCC
Q 042583          156 LLKCVKG-DDGISHLKEVIICVDDQAQSFIQCAK  188 (206)
Q Consensus       156 ~l~C~~~-~~~~~~L~Ev~iC~~~~~~~~i~Cp~  188 (206)
                      .|+|.++ .++..+|.||+||||+++..+||||.
T Consensus       156 ~l~C~~~~~~~~~~L~ei~iC~~~~~~~~idCp~  189 (189)
T PF00445_consen  156 QLRCSRNQVNGEQYLTEIRICFDKDLFQFIDCPC  189 (189)
T ss_dssp             EEEEECTETTSEEEEEEEEEEEETTSSSEE--S-
T ss_pred             EEEEecCCCCCcEEEEEEEEEEeCCCCeEeCCcC
Confidence            9999996 66778999999999999866999983

1.27.1 from EC). Two histidines residues have been shown [, ] to be involved in the catalytic mechanism of RNase T2 and Rh. These residues and the region around them are highly conserved in a number of other RNAses that have been found to be evolutionary related to these fungal enzymes.; GO: 0003723 RNA binding, 0033897 ribonuclease T2 activity; PDB: 1IOO_A 3D3Z_A 1UCG_B 1UCC_A 1J1F_A 1V9H_A 1UCD_A 1J1G_A 1UCA_A 1BK7_A ....

>cd01062 RNase_T2_prok Ribonuclease T2 (RNase T2) is a widespread family of secreted RNases found in every organism examined thus far

Probab=100.00  E-value=2.4e-45  Score=299.03  Aligned_cols=150  Identities=25%  Similarity=0.524  Sum_probs=126.7

Q ss_pred             ccEEEEEEecccccccCCC-------CCCC-CCCcEEeeeecccc----------C------CCcchhhhcccCcCcCCC
Q 042583           23 FDHFWLVQVWPSGYCLQAN-------CSQT-SDRFIIHGLWAVNV----------V------DKTLPDLMRYWLPLNENN   78 (206)
Q Consensus        23 fD~~~l~l~W~p~~C~~~~-------C~~p-~~~ftIHGLWP~~~----------~------~~l~~~L~~~Wp~l~~~~   78 (206)
                      ||||+|||+|||+||..+.       |..+ ..+||||||||++.          .      ++++.+|..+||+     
T Consensus         1 fd~~~lal~Wpps~C~~~~~~~~~~~~~~~~~~~ftiHGLWP~~~~~~~p~~C~~~~~~~~~~~~~~~l~~~~p~-----   75 (184)
T cd01062           1 FDYYVLALSWQPGFCATQGDRPECATCGTLDAYGFTLHGLWPQKPKGGWPEYCGVTSEPPLSEETRSRLLDVMPA-----   75 (184)
T ss_pred             CceEEEEEeeCHHHhccCCcCCccccCCCCCCCceEEecCCCCCCCCCCcCcCcCCcCCCCCHHHHHHHHhhCCc-----
Confidence            7999999999999997642       2333 78999999999874          1      1244578889992     


Q ss_pred             chhhHhHHhhhccceeecccCCCCHHHHHHHHHHHHHhCChHHHHhhCCCCCCCCCCCcccHHHHHHHHHHhhCCCc---
Q 042583           79 LSRAENFWIYQWKKHGSAAKEFIQPRDYFQMALQLAKDTDLRNTLQNHGAVPILPDGGSYNKRDYKAAIKNKTGHDP---  155 (206)
Q Consensus        79 ~~~~~~fW~hEW~KHGtCs~~~~~~~~YF~~al~l~~~~~i~~~L~~~gI~Ps~~~~~~y~~~~i~~ai~~~~g~~p---  155 (206)
                      .    .||+|||+|||||++  .++.+||++|++|++++|+.++|+..++ +   .+  |+.++|++||++++|..|   
T Consensus        76 ~----~~w~hEW~KHGtC~~--~~~~~YF~~a~~l~~~~~~~~~l~~~~~-~---~~--~~~~~i~~a~~~~~~~~~~~~  143 (184)
T cd01062          76 S----GLIRHEWRKHGTCSG--LDPDAYFAKARNLREALKIPPELRLLAG-N---IG--VTASEIRQAFIKANPGLPPDA  143 (184)
T ss_pred             h----hHhHHHHhcCCcCCC--CCHHHHHHHHHHHHHHcCcchhhhhccc-c---CC--cCHHHHHHHHHHHCCCCCCce
Confidence            2    799999999999998  8999999999999999999999998654 3   24  999999999999999776   


Q ss_pred             -eEEeeeCCCCCCcEEEEEEEEecCCCceecCCCCCC-CCCC
Q 042583          156 -LLKCVKGDDGISHLKEVIICVDDQAQSFIQCAKQKD-RCYF  195 (206)
Q Consensus       156 -~l~C~~~~~~~~~L~Ev~iC~~~~~~~~i~Cp~~~~-~C~~  195 (206)
                       .|+|.+     ++|.||+||||++++ +++||.... .|++
T Consensus       144 ~~~~C~~-----~~L~Ei~iC~~~~~~-~~~C~~~~~~~C~~  179 (184)
T cd01062         144 VSVSCQG-----GLLTEVRICLDKDLK-FAACPTADRDNCPA  179 (184)
T ss_pred             EEEEECC-----CeEEEEEEEeCcccC-cccCCccccCCCCC
Confidence             899965     799999999999986 999998643 3995

This family includes RNase Rh, RNase MC1, RNase LE, and self-incompatibility RNases (S-RNases). Plant T2 RNases are expressed during leaf senescence in order to scavenge phosphate from ribonucleotides. They are also expressed in response to wounding or pathogen invasion. S-RNases are thought to prevent self-fertilization by acting as selective cytotoxins of "self" pollen. Generally, RNases have two distinct binding sites: the primary site (B1 site) and the subsite (B2 site), for nucleotides located at the 5'- and 3'- terminal ends of the sessil bond, respectively. This CD includes the prokaryotic RNase T2 family members.

>PRK10095 ribonuclease I; Provisional

Probab=100.00  E-value=8.1e-41  Score=285.55  Aligned_cols=166  Identities=23%  Similarity=0.453  Sum_probs=127.2

Q ss_pred             CCCCccEEEEEEecccccccCC---------CCCC------CCCCcEEeeeecccc------------------------
Q 042583           19 DSSGFDHFWLVQVWPSGYCLQA---------NCSQ------TSDRFIIHGLWAVNV------------------------   59 (206)
Q Consensus        19 ~~~~fD~~~l~l~W~p~~C~~~---------~C~~------p~~~ftIHGLWP~~~------------------------   59 (206)
                      .+|+||||+|||+|+|+||...         +|..      ....||||||||++.                        
T Consensus        30 ~~g~fd~YvLALSWqP~fC~~~~~~~~~~~~eC~~~~~~~~~~~~f~LHGLWP~~~~~~~~~g~~~~~~~~~~C~~~~~p  109 (268)
T PRK10095         30 QYGDFDRYVLALSWQTGFCQSQHDRNRNEPDECRLQKETTNKADFLTVHGLWPGLPKSVAARGVDERRWMRFGCATRPIP  109 (268)
T ss_pred             cCCCcceEEEEEeeCHHHHhhhccccCCCchhhhccccCCCCCCceEEecCCCCCcccccccCccccccccccccccCCC
Confidence            4789999999999999999531         3862      257799999999761                        


Q ss_pred             ------------------CCCcchhhhcccCcCcCCCchhhHhHHhhhccceeecccCCCCHHHHHHHHHHHHHhCChHH
Q 042583           60 ------------------VDKTLPDLMRYWLPLNENNLSRAENFWIYQWKKHGSAAKEFIQPRDYFQMALQLAKDTDLRN  121 (206)
Q Consensus        60 ------------------~~~l~~~L~~~Wp~l~~~~~~~~~~fW~hEW~KHGtCs~~~~~~~~YF~~al~l~~~~~i~~  121 (206)
                                        .+++...|..++|+....+     .||+|||+|||||++  +++.+||.++++|++++|++.
T Consensus       110 ~~p~~~~~~~C~~~~~~l~~~~~~~l~~~mP~~~~~s-----~l~~heW~KHGtC~~--~~~~~YF~~al~L~~kvn~s~  182 (268)
T PRK10095        110 NLPEARASRKCSAPETGLSLETAAKLSEVMPGAGGRS-----CLERYEYAKHGACFG--FDPDAYFGTMVRLNQEIKESE  182 (268)
T ss_pred             ccccccccccccCCCCCCCHHHHHHHHHhCCCCCccc-----hhHHHHHHhCCeecC--CCHHHHHHHHHHHHHHhchhh
Confidence                              0112334455555553221     699999999999998  899999999999999999644


Q ss_pred             ---HHhhCCCCCCCCCCCcccHHHHHHHHHHhhCC----CceEEeeeCCCCCCcEEEEEEEEecC-------CCceecCC
Q 042583          122 ---TLQNHGAVPILPDGGSYNKRDYKAAIKNKTGH----DPLLKCVKGDDGISHLKEVIICVDDQ-------AQSFIQCA  187 (206)
Q Consensus       122 ---~L~~~gI~Ps~~~~~~y~~~~i~~ai~~~~g~----~p~l~C~~~~~~~~~L~Ev~iC~~~~-------~~~~i~Cp  187 (206)
                         +|.++       .|+.|+.++|++||++++|.    .|.|+|.++.   .+|.||+||++++       ...+++|+
T Consensus       183 ~~~~L~~~-------~Gk~~s~~~I~~Ai~~a~G~~~~~~~~L~C~~~~---~~L~EV~ICl~~~~~~~~l~~~~~~~~~  252 (268)
T PRK10095        183 AGKFLADN-------YGKTVSRRDFDAAFAKSWGKENVKAVKLTCQGNP---AYLTEIQISLKADAINAPLSANSFLPQP  252 (268)
T ss_pred             hhhhhhcC-------CCcEEcHHHHHHHHHHHhCCCCCCcceEEeCCCC---cEEEEEEEEcccccccCCchhhhccCCC
Confidence               56553       48999999999999999984    4599998632   5899999999988       21246777


Q ss_pred             CCCCCCCCceEecCC
Q 042583          188 KQKDRCYFDIMFDVP  202 (206)
Q Consensus       188 ~~~~~C~~~i~~P~~  202 (206)
                      .. ++|+..|++|+.
T Consensus       253 ~~-~~C~~~~~i~~~  266 (268)
T PRK10095        253 HP-GNCGKQFVIDKA  266 (268)
T ss_pred             CC-CCCCCCeeeCCC
Confidence            53 339999887653

>COG3719 Rna Ribonuclease I [Translation, ribosomal structure and biogenesis]

Probab=100.00  E-value=2.7e-38  Score=262.53  Aligned_cols=161  Identities=25%  Similarity=0.548  Sum_probs=126.3

Q ss_pred             CccEEEEEEecccccccCCC--------CCCC-CCCcEEeeeeccccCC---Ccchhhh--cccCcCcCCC-------ch
Q 042583           22 GFDHFWLVQVWPSGYCLQAN--------CSQT-SDRFIIHGLWAVNVVD---KTLPDLM--RYWLPLNENN-------LS   80 (206)
Q Consensus        22 ~fD~~~l~l~W~p~~C~~~~--------C~~p-~~~ftIHGLWP~~~~~---~l~~~L~--~~Wp~l~~~~-------~~   80 (206)
                      .||+|+|+|+|+|+||.++.        |... ..+||+|||||++...   ....+-.  ..||+|....       .+
T Consensus        52 g~d~YVLALSWsP~fC~sq~~~~e~~~Qc~~~~~~gftVHGLWPqn~~~~~~~~~pr~cr~~~~~~lP~v~~~~l~~vmP  131 (249)
T COG3719          52 GFDFYVLALSWSPGFCESQHDPDECRLQCETNRAFGFTVHGLWPQNENGRAVRDYPRFCRGRPWPRLPEVIASQLLDVMP  131 (249)
T ss_pred             CcceEEEEEecChHHhhcCCCcchhHHhcccccccceEEeccCCCCCCCcccccChhhhcCCCcccCCHHHHHHHhhcCC
Confidence            39999999999999998753        6633 7899999999998711   0111111  2466553211       11


Q ss_pred             hhHhHHhhhccceeecccCCCCHHHHHHHHHHHHHhCChHHHHhhCCCCCCCCCCCcccHHHHHHHHHHhhCC----Cce
Q 042583           81 RAENFWIYQWKKHGSAAKEFIQPRDYFQMALQLAKDTDLRNTLQNHGAVPILPDGGSYNKRDYKAAIKNKTGH----DPL  156 (206)
Q Consensus        81 ~~~~fW~hEW~KHGtCs~~~~~~~~YF~~al~l~~~~~i~~~L~~~gI~Ps~~~~~~y~~~~i~~ai~~~~g~----~p~  156 (206)
                      +. .|-+|||+|||||++  .+|.+||.++++|+++++++..+...-      ++++++.++|+.||.+++|.    .+.
T Consensus       132 g~-~L~~heW~KHGtC~g--~s~~~YFa~~r~l~~~l~~p~~~~~~a------~~~~ls~~ei~~AF~~~n~~~~~~~v~  202 (249)
T COG3719         132 GA-GLERHEWRKHGTCSG--LSQEAYFATTRRLFEELKLPPVRKLLA------DGKTLSRDEIEQAFDKANGGLKGDAVR  202 (249)
T ss_pred             ch-hhhhhhHHhcCccCC--CCHHHHHHHHHHHHHHhcCCccccccc------cccccCHHHHHHHHHHhCCCCCchheE
Confidence            23 799999999999999  999999999999999999988765431      47889999999999999963    578


Q ss_pred             EEeeeCCCCCCcEEEEEEEEecCCCceecC----CCCCCC-CCCce
Q 042583          157 LKCVKGDDGISHLKEVIICVDDQAQSFIQC----AKQKDR-CYFDI  197 (206)
Q Consensus       157 l~C~~~~~~~~~L~Ev~iC~~~~~~~~i~C----p~~~~~-C~~~i  197 (206)
                      +.|..     ++|+||+||+|++.. +++|    |..... |+..+
T Consensus       203 vsc~~-----~~LtEl~Icl~~~~~-~~ac~~~~~~~~~~~C~~~~  242 (249)
T COG3719         203 VSCQG-----NYLTELRICLDKDLQ-NAACLADLPQPDPGNCRKTF  242 (249)
T ss_pred             EEeec-----cceeeEEEEEccccc-cchhhccCCCCCcccccccc
Confidence            99987     699999999999997 7999    766554 99743

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	206
1ioo_A	196	Crystal Structure Of Nicotiana Alata Gemetophytic S		4e-21
1dix_A	208	Crystal Structure Of Rnase Le Length = 208		9e-20
1iyb_A	208	Crystal Structure Of The Nicotiana Glutinosa Ribonu		1e-19
1vcz_A	217	Crystal Structure Of The Rnase Nt In Complex With 5		2e-16
1j1f_A	191	Crystal Structure Of The Rnase Mc1 Mutant N71t In C		2e-15
1bk7_A	190	Ribonuclease Mc1 From The Seeds Of Bitter Gourd Len		2e-15
1v9h_A	197	Crystal Structure Of The Rnase Mc1 Mutant Y101a In		7e-15
1j1g_A	190	Crystal Structure Of The Rnase Mc1 Mutant N71s In C		1e-14
1ucg_A	190	Crystal Structure Of Ribonuclease Mc1 N71t Mutant L		3e-14
3t0o_A	238	Crystal Structure Analysis Of Human Rnase T2 Length		7e-13
1iqq_A	200	Crystal Structure Of Japanese Pear S3-Rnase Length		2e-06
1bol_A	222	The Crystal Structure Of Ribonuclease Rh From Rhizo		4e-05

>pdb|1IOO|A Chain A, Crystal Structure Of Nicotiana Alata Gemetophytic Self-incompatibility Associated Sf11-rnase Length = 196

Iteration: 1
 Score = 97.8 bits (242), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 64/190 (33%), Positives = 89/190 (46%), Gaps = 24/190 (12%)
Query: 23  FDHFWLVQVWPSGYCLQANCSQTS-DRFIIHGLWAVNV----------------VDKTLP 65
           F++  LV  WP+ +C   +C + + + F IHGLW  NV                  K L 
Sbjct: 2   FEYLQLVLTWPASFCYANHCERIAPNNFTIHGLWPDNVKTRLHNCKPKPTYSYFTGKMLN 61
Query: 66  DLMRYWLPLN-ENNLSRAEN-FWIYQWKKHGSAAKEFIQPRDYFQMALQLAKDTDLRNTL 123
           DL ++W+ L  E +  R E   W YQ+ KHGS  ++      YF +AL+L    DL  TL
Sbjct: 62  DLDKHWMQLKFEQDYGRTEQPSWKYQYIKHGSCCQKRYNQNTYFGLALRLKDKFDLLRTL 121
Query: 124 QNHGAVPILPDGGSYNKRDYKAAIKNKTGHDPLLKCVKGDDGISHLKEVIICVDDQAQSF 183
           Q H  +P    G SY  +D   AIK  +  +P +KC +   G   L E+ IC    A S 
Sbjct: 122 QTHRIIP----GSSYTFQDIFDAIKTVSQENPDIKCAEVTKGTPELYEIGICFTPNADSM 177
Query: 184 IQCAKQKDRC 193
            +C  Q D C
Sbjct: 178 FRCP-QSDTC 186

>pdb|1DIX|A Chain A, Crystal Structure Of Rnase Le Length = 208

Iteration: 1
 Score = 93.2 bits (230), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 64/192 (33%), Positives = 90/192 (46%), Gaps = 29/192 (15%)
Query: 20  SSGFDHFWLVQVWPSGYC--LQANCSQTSDR----FIIHGLWAVNVVDKTLPDLMRYWLP 73
           S  FD F+ VQ WP  YC   Q+ C  T+ +    F IHGLW  N  D T P       P
Sbjct: 4   SKDFDFFYFVQQWPGSYCDTKQSCCYPTTGKPAADFGIHGLWPNNN-DGTYPSNCDPNSP 62
Query: 74  LNENNLS------------------RAENFWIYQWKKHGSAAKEFIQPRD-YFQMALQLA 114
            +++ +S                      FW ++W+KHG+ A+  +  +  YF+ AL L 
Sbjct: 63  YDQSQISDLISSMQQNWPTLACPSGSGSTFWSHEWEKHGTCAESVLTNQHAYFKKALDLK 122
Query: 115 KDTDLRNTLQNHGAVPILPDGGSYNKRDYKAAIKNKTGHDPLLKCVKGDDGISHLKEVII 174
              DL + LQ      I PDG SY+  + + AIK+  G+ P ++C     G S L +V I
Sbjct: 123 NQIDLLSILQ---GADIHPDGESYDLVNIRNAIKSAIGYTPWIQCNVDQSGNSQLYQVYI 179
Query: 175 CVDDQAQSFIQC 186
           CVD    S I+C
Sbjct: 180 CVDGSGSSLIEC 191

>pdb|1IYB|A Chain A, Crystal Structure Of The Nicotiana Glutinosa Ribonuclease Nw Length = 208

Iteration: 1
 Score = 92.8 bits (229), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 62/202 (30%), Positives = 91/202 (45%), Gaps = 29/202 (14%)
Query: 23  FDHFWLVQVWPSGYC--LQANC----SQTSDRFIIHGLWAVNVVDKTLPDLMRYWLPLNE 76
           FD F+ VQ WP  YC   Q+ C     + +  F IHGLW  N  D + P       P ++
Sbjct: 8   FDFFYFVQQWPGSYCDTKQSCCYPKTGKPASDFGIHGLWPNNN-DGSYPSNCDSNSPYDQ 66
Query: 77  NNLS------------------RAENFWIYQWKKHGSAAKEFIQPRDYFQMALQLAKDTD 118
           + +S                      FW ++W+KHG+ A+       YF+ AL L    +
Sbjct: 67  SQVSDLISRMQQNWPTLACPSGTGSAFWSHEWEKHGTCAENVFDQHGYFKKALDLKNQIN 126
Query: 119 LRNTLQNHGAVPILPDGGSYNKRDYKAAIKNKTGHDPLLKCVKGDDGISHLKEVIICVDD 178
           L   LQ  G   I PDGG Y+    K AI++  G+ P ++C   + G S L ++ ICVD 
Sbjct: 127 LLEILQGAG---IHPDGGFYSLNSIKNAIRSAIGYAPGIECNVDESGNSQLYQIYICVDG 183
Query: 179 QAQSFIQCAK-QKDRCYFDIMF 199
              + I+C    + +C   I F
Sbjct: 184 SGSNLIECPIFPRGKCGSSIEF 205

>pdb|1VCZ|A Chain A, Crystal Structure Of The Rnase Nt In Complex With 5'-Gmp Length = 217

Iteration: 1
 Score = 82.0 bits (201), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 57/188 (30%), Positives = 82/188 (43%), Gaps = 29/188 (15%)
Query: 23  FDHFWLVQVWPSGYC--LQANCSQTSDR----FIIHGLWAVNVVDKTLPDLMRYWLPLNE 76
           FD F+ VQ WP+ YC   ++ C  T+ +    F IHGLW  N  +   P        L+E
Sbjct: 8   FDFFYFVQQWPASYCDTRRSCCYPTTGKPDEDFSIHGLWP-NYENGKWPQNCDRESSLDE 66
Query: 77  NNLSR------------------AENFWIYQWKKHGSAAKEFIQPRDYFQMALQLAKDTD 118
           + +S                      FW ++W KHG+ +   +  R YFQ AL   K ++
Sbjct: 67  SEISDLISTMEKNWPSLACPSSDGVRFWSHEWLKHGTCSA--LGERAYFQAALDFRKKSN 124
Query: 119 LRNTLQNHGAVPILPDGGSYNKRDYKAAIKNKTGHDPLLKCVKGDDGISHLKEVIICVDD 178
           L   L+N    P   +G  Y     K AI+   GH P ++C     G   + +V +CVD 
Sbjct: 125 LLENLKNAEITPR--NGEHYTLESIKKAIEEGVGHSPYIECNVDTQGNHQIYQVYLCVDK 182
Query: 179 QAQSFIQC 186
            A  FI C
Sbjct: 183 TATDFIDC 190

>pdb|1J1F|A Chain A, Crystal Structure Of The Rnase Mc1 Mutant N71t In Complex With 5'-Gmp Length = 191

Iteration: 1
 Score = 78.6 bits (192), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 54/199 (27%), Positives = 85/199 (42%), Gaps = 31/199 (15%)
Query: 23  FDHFWLVQVWPSGYCL---QANCSQTSDR-FIIHGLWA----------------VNVVDK 62
           FD FW VQ WP   C      +C  +  R F IHGLW                 +  +  
Sbjct: 2   FDSFWFVQQWPPAVCSFQKSGSCPGSGLRTFTIHGLWPQQSGTSLTNCPGSPFDITKISH 61
Query: 63  TLPDLMRYW-LPLNENNLSRAENFWIYQWKKHGSAAKEFIQPRDYFQMALQLAKDTDLRN 121
               L   W   L  NN    + FW ++W KHG+ ++       YF++A+ +  + D+  
Sbjct: 62  LQSQLNTLWPTVLRANN----QQFWSHEWTKHGTCSESTFNQAAYFKLAVDMRNNYDIIG 117
Query: 122 TLQNHGAVPILPDGGSYNKRDYKAAIKNKTGHDPLLKC-VKGDDGISHLKEVIICVDDQA 180
            L+ H A    P+G + +++  K  +K K G  P L+C       +S+L EV+ C     
Sbjct: 118 ALRPHAAG---PNGRTKSRQAIKGFLKAKFGKFPGLRCRTDPQTKVSYLVEVVACFAQDG 174
Query: 181 QSFIQCAKQKDRCYFDIMF 199
            + I C   +D C  + +F
Sbjct: 175 STLIDCT--RDTCGANFIF 191

>pdb|1BK7|A Chain A, Ribonuclease Mc1 From The Seeds Of Bitter Gourd Length = 190

Iteration: 1
 Score = 78.6 bits (192), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 55/195 (28%), Positives = 88/195 (45%), Gaps = 23/195 (11%)
Query: 23  FDHFWLVQVWPSGYCL---QANCSQTSDR-FIIHGLWAV-----------NVVDKTLPDL 67
           FD FW VQ WP   C      +C  +  R F IHGLW             +  D T    
Sbjct: 1   FDSFWFVQQWPPAVCSFQKSGSCPGSGLRTFTIHGLWPQQSGTSLTNCPGSPFDITKISH 60
Query: 68  MRYWLPLNENNLSRAEN--FWIYQWKKHGSAAKEFIQPRDYFQMALQLAKDTDLRNTLQN 125
           ++  L     N+ RA N  FW ++W KHG+ ++       YF++A+ +  + D+   L+ 
Sbjct: 61  LQSQLNTLWPNVLRANNQQFWSHEWTKHGTCSESTFNQAAYFKLAVDMRNNYDIIGALRP 120
Query: 126 HGAVPILPDGGSYNKRDYKAAIKNKTGHDPLLKC-VKGDDGISHLKEVIICVDDQAQSFI 184
           H A    P+G + +++  K  +K K G  P L+C       +S+L +V+ C      + I
Sbjct: 121 HAAG---PNGRTKSRQAIKGFLKAKFGKFPGLRCRTDPQTKVSYLVQVVACFAQDGSTLI 177
Query: 185 QCAKQKDRCYFDIMF 199
            C   +D C  + +F
Sbjct: 178 DCT--RDTCGANFIF 190

>pdb|1V9H|A Chain A, Crystal Structure Of The Rnase Mc1 Mutant Y101a In Complex With 5'-Ump Length = 197

Iteration: 1
 Score = 77.0 bits (188), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 55/195 (28%), Positives = 87/195 (44%), Gaps = 23/195 (11%)
Query: 23  FDHFWLVQVWPSGYCL---QANCSQTSDR-FIIHGLWAV-----------NVVDKTLPDL 67
           FD FW VQ WP   C      +C  +  R F IHGLW             +  D T    
Sbjct: 8   FDSFWFVQQWPPAVCSFQKSGSCPGSGLRTFTIHGLWPQQSGTSLTNCPGSPFDITKISH 67
Query: 68  MRYWLPLNENNLSRAEN--FWIYQWKKHGSAAKEFIQPRDYFQMALQLAKDTDLRNTLQN 125
           ++  L     N+ RA N  FW ++W KHG+ ++        F++A+ +  + D+   L+ 
Sbjct: 68  LQSQLNTLWPNVLRANNQQFWSHEWTKHGTCSESTFNQAAAFKLAVDMRNNYDIIGALRP 127
Query: 126 HGAVPILPDGGSYNKRDYKAAIKNKTGHDPLLKC-VKGDDGISHLKEVIICVDDQAQSFI 184
           H A    P+G + +++  K  +K K G  P L+C       +S+L EV+ C      + I
Sbjct: 128 HAAG---PNGRTKSRQAIKGFLKAKFGKFPGLRCRTDPQTKVSYLVEVVACFAQDGSTLI 184
Query: 185 QCAKQKDRCYFDIMF 199
            C   +D C  + +F
Sbjct: 185 DCT--RDTCGANFIF 197

>pdb|1J1G|A Chain A, Crystal Structure Of The Rnase Mc1 Mutant N71s In Complex With 5'-Gmp Length = 190

Iteration: 1
 Score = 76.3 bits (186), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 53/198 (26%), Positives = 84/198 (42%), Gaps = 31/198 (15%)
Query: 24  DHFWLVQVWPSGYCL---QANCSQTSDR-FIIHGLWA----------------VNVVDKT 63
           D FW VQ WP   C      +C  +  R F IHGLW                 +  +   
Sbjct: 2   DSFWFVQQWPPAVCSFQKSGSCPGSGLRTFTIHGLWPQQSGTSLTNCPGSPFDITKISHL 61
Query: 64  LPDLMRYWLP-LNENNLSRAENFWIYQWKKHGSAAKEFIQPRDYFQMALQLAKDTDLRNT 122
              L   W   L  NN    + FW ++W KHG+ ++       YF++A+ +  + D+   
Sbjct: 62  QSQLNTLWPSVLRANN----QQFWSHEWTKHGTCSESTFNQAAYFKLAVDMRNNYDIIGA 117
Query: 123 LQNHGAVPILPDGGSYNKRDYKAAIKNKTGHDPLLKC-VKGDDGISHLKEVIICVDDQAQ 181
           L+ H A    P+G + +++  K  +K K G  P L+C       +S+L EV+ C      
Sbjct: 118 LRPHAAG---PNGRTKSRQAIKGFLKAKFGKFPGLRCRTDPQTKVSYLVEVVACFAQDGS 174
Query: 182 SFIQCAKQKDRCYFDIMF 199
           + I C   +D C  + +F
Sbjct: 175 TLIDCT--RDTCGANFIF 190

>pdb|1UCG|A Chain A, Crystal Structure Of Ribonuclease Mc1 N71t Mutant Length = 190

Iteration: 1
 Score = 75.1 bits (183), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 52/198 (26%), Positives = 84/198 (42%), Gaps = 31/198 (15%)
Query: 24  DHFWLVQVWPSGYCL---QANCSQTSDR-FIIHGLWA----------------VNVVDKT 63
           D FW VQ WP   C      +C  +  R F IHGLW                 +  +   
Sbjct: 2   DSFWFVQQWPPAVCSFQKSGSCPGSGLRTFTIHGLWPQQSGTSLTNCPGSPFDITKISHL 61
Query: 64  LPDLMRYW-LPLNENNLSRAENFWIYQWKKHGSAAKEFIQPRDYFQMALQLAKDTDLRNT 122
              L   W   L  NN    + FW ++W KHG+ ++       YF++A+ +  + D+   
Sbjct: 62  QSQLNTLWPTVLRANN----QQFWSHEWTKHGTCSESTFNQAAYFKLAVDMRNNYDIIGA 117
Query: 123 LQNHGAVPILPDGGSYNKRDYKAAIKNKTGHDPLLKC-VKGDDGISHLKEVIICVDDQAQ 181
           L+ H A    P+G + +++  K  +K K G  P L+C       +S+L +V+ C      
Sbjct: 118 LRPHAAG---PNGRTKSRQAIKGFLKAKFGKFPGLRCRTDPQTKVSYLVQVVACFAQDGS 174
Query: 182 SFIQCAKQKDRCYFDIMF 199
           + I C   +D C  + +F
Sbjct: 175 TLIDCT--RDTCGANFIF 190

>pdb|3T0O|A Chain A, Crystal Structure Analysis Of Human Rnase T2 Length = 238

Iteration: 1
 Score = 70.5 bits (171), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 48/190 (25%), Positives = 84/190 (44%), Gaps = 24/190 (12%)
Query: 19  DSSGFDHFWLVQVWPSGYC--LQANCSQTSDRFIIHGLWA-------------VNVVDKT 63
           D+  +    +VQ WP   C  +Q +C    D + IHGLW              +  +   
Sbjct: 6   DNHEWKKLIMVQHWPETVCEKIQNDCRDPPDYWTIHGLWPDKSEGCNRSWPFNLEEIKDL 65
Query: 64  LPDLMRYWLPLNENNLSRAENFWIYQWKKHGSAAKE---FIQPRDYFQMALQLAKDTDLR 120
           LP++  YW P   ++      FW ++W+KHG+ A +       + YF  +L+L ++ DL 
Sbjct: 66  LPEMRAYW-PDVIHSFPNRSRFWKHEWEKHGTCAAQVDALNSQKKYFGRSLELYRELDLN 124
Query: 121 NTLQNHGAVPILPDGGSYNKRDYKAAIKNKTGHDPLLKCV--KGDDGISHLKEVIICVDD 178
           + L   G   I P    Y   D+K A+    G  P ++C+    D+ +  + ++ +C+  
Sbjct: 125 SVLLKLG---IKPSINYYQVADFKDALARVYGVIPKIQCLPPSQDEEVQTIGQIELCLTK 181
Query: 179 QAQSFIQCAK 188
           Q Q    C +
Sbjct: 182 QDQQLQNCTE 191

>pdb|1IQQ|A Chain A, Crystal Structure Of Japanese Pear S3-Rnase Length = 200

Iteration: 1
 Score = 48.9 bits (115), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 45/184 (24%), Positives = 73/184 (39%), Gaps = 23/184 (12%)
Query: 23  FDHFWLVQVWPSGYCLQAN--CSQTSDR-FIIHGLWAVNVVD-----------KTLPDLM 68
           +D+F   Q +    C      C    D+ F +HGLW  N+V            +    L+
Sbjct: 1   YDYFQFTQQYQLAVCNSNRTLCKDPPDKLFTVHGLWPSNMVGPDPSKCPIKNIRKREKLL 60
Query: 69  RYWLPLN-ENNLSRAEN--FWIYQWKKHGSAAKEFIQPRD-YFQMALQL--AKDTDLRNT 122
            + L +   N   R +N  FW  +W KHGS     I   + YF+  +++  +K  ++   
Sbjct: 61  EHQLEIIWPNVFDRTKNNLFWDKEWMKHGSCGYPTIDNENHYFETVIKMYISKKQNVSRI 120
Query: 123 LQNHGAVPILPDGGSYNKRDYKAAIKNKTGHDPLLKCVKGDDGISHLKEVIICVDDQAQS 182
           L       I PDG      D + AI+N   +       +     + L E+ +C D   + 
Sbjct: 121 L---SKAKIEPDGKKRALLDIENAIRNGADNKKPKLKCQKKGTTTELVEITLCSDKSGEH 177
Query: 183 FIQC 186
           FI C
Sbjct: 178 FIDC 181

>pdb|1BOL|A Chain A, The Crystal Structure Of Ribonuclease Rh From Rhizopus Niveus At 2.0 A Resolution Length = 222

Iteration: 1
 Score = 44.7 bits (104), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 36/152 (23%), Positives = 60/152 (39%), Gaps = 24/152 (15%)
Query: 26  FWLVQVWP----SGYCLQANCSQTSDRFIIHGLWAVNVVDKTLPDLMRYWLPLNENNLSR 81
           F L  +WP      Y     C        I  +  +   D +L + M  + P N+ N + 
Sbjct: 43  FTLHGLWPDKCSGAYAPSGGCDSNRASSSIASV--IKSKDSSLYNSMLTYWPSNQGNNNV 100
Query: 82  AENFWIYQWKKHGSAA-----------KEFIQPRDYFQMALQLAKDTDLRNTLQNHGAVP 130
              FW ++W KHG+             +E     DYFQ A+ L    ++     ++G  P
Sbjct: 101 ---FWSHEWSKHGTCVSTYDPDCYDNYEEGEDIVDYFQKAMDLRSQYNVYKAFSSNGITP 157
Query: 131 ILPDGGSYNKRDYKAAIKNKTGHDPLLKCVKG 162
               GG+Y   + ++AI++  G    + C  G
Sbjct: 158 ----GGTYTATEMQSAIESYFGAKAKIDCSSG 185

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	206
1iyb_A	208	Ribonuclease, ribonuclease M5; hydrolase; HET: 5GP	5e-40
1ioo_A	196	SF11-RNAse; SELF-incompatibility ribonuclease, hyd	2e-35
1ucd_A	190	Ribonuclease MC; alpha plus beta, hydrolase; HET:	2e-34
1vcz_A	217	RNAse NGR3; hydrolase, ribonuclease; HET: 5GP; 1.8	3e-32
1sgl_A	209	Trichomaglin; S-like ribonuclease, X-RAY sequence,	7e-32
3t0o_A	238	Ribonuclease T2, ribonuclease 6; rnaset2, alpha/be	2e-30
1jy5_A	212	CALSEPRRP; RNAse, alpha-beta protein, hydrolase; 2	2e-30
1iqq_A	200	S3-RNAse; japanese PEAR, SELF-incompatibilit famil	7e-28
1bol_A	222	Protein (ribonuclease RH); ribonucleases, hydrolas	1e-18
3d3z_A	247	Actibind; RNAse, hydrolase; HET: NAG D3Z; 1.70A {A	6e-18
2pqx_A	245	Ribonuclease I; hydrolase; HET: MES; 1.42A {Escher	6e-17

>1iyb_A Ribonuclease, ribonuclease M5; hydrolase; HET: 5GP; 1.50A {Nicotiana glutinosa} SCOP: d.124.1.1 PDB: 1dix_A Length = 208

 Score =  135 bits (340), Expect = 5e-40
 Identities = 59/212 (27%), Positives = 87/212 (41%), Gaps = 31/212 (14%)

Query: 17  TCDSSGFDHFWLVQVWPSGYCLQANC------SQTSDRFIIHGLW--------------- 55
              +  FD F+ VQ WP  YC            + +  F IHGLW               
Sbjct: 2   VEFAQDFDFFYFVQQWPGSYCDTKQSCCYPKTGKPASDFGIHGLWPNNNDGSYPSNCDSN 61

Query: 56  ---AVNVVDKTLPDLMRYWLPLNENNLSRAENFWIYQWKKHGSAAKEFIQPRDYFQMALQ 112
                + V   +  + + W P           FW ++W+KHG+ A+       YF+ AL 
Sbjct: 62  SPYDQSQVSDLISRMQQNW-PTLACPSGTGSAFWSHEWEKHGTCAENVFDQHGYFKKALD 120

Query: 113 LAKDTDLRNTLQNHGAVPILPDGGSYNKRDYKAAIKNKTGHDPLLKCVKGDDGISHLKEV 172
           L    +L   LQ  G   I PDGG Y+    K AI++  G+ P ++C   + G S L ++
Sbjct: 121 LKNQINLLEILQGAG---IHPDGGFYSLNSIKNAIRSAIGYAPGIECNVDESGNSQLYQI 177

Query: 173 IICVDDQAQSFIQC-AKQKDRCYFDIMFDVPP 203
            ICVD    + I+C    + +C   I F  P 
Sbjct: 178 YICVDGSGSNLIECPIFPRGKCGSSIEF--PT 207

>1ioo_A SF11-RNAse; SELF-incompatibility ribonuclease, hydrolase; HET: NAG BMA MAN; 1.55A {Nicotiana alata} SCOP: d.124.1.1 Length = 196

 Score =  122 bits (308), Expect = 2e-35
 Identities = 57/197 (28%), Positives = 86/197 (43%), Gaps = 24/197 (12%)

Query: 23  FDHFWLVQVWPSGYCLQANCSQTSDR-FIIHGLWAVN----------------VVDKTLP 65
           F++  LV  WP+ +C   +C + +   F IHGLW  N                   K L 
Sbjct: 2   FEYLQLVLTWPASFCYANHCERIAPNNFTIHGLWPDNVKTRLHNCKPKPTYSYFTGKMLN 61

Query: 66  DLMRYWL--PLNENNLSRAENFWIYQWKKHGSAAKEFIQPRDYFQMALQLAKDTDLRNTL 123
           DL ++W+     ++     +  W YQ+ KHGS  ++      YF +AL+L    DL  TL
Sbjct: 62  DLDKHWMQLKFEQDYGRTEQPSWKYQYIKHGSCCQKRYNQNTYFGLALRLKDKFDLLRTL 121

Query: 124 QNHGAVPILPDGGSYNKRDYKAAIKNKTGHDPLLKCVKGDDGISHLKEVIICVDDQAQSF 183
           Q H  +P    G SY  +D   AIK  +  +P +KC +   G   L E+ IC    A S 
Sbjct: 122 QTHRIIP----GSSYTFQDIFDAIKTVSQENPDIKCAEVTKGTPELYEIGICFTPNADSM 177

Query: 184 IQCAKQKD-RCYFDIMF 199
            +C +         ++F
Sbjct: 178 FRCPQSDTCDKTAKVLF 194

>1ucd_A Ribonuclease MC; alpha plus beta, hydrolase; HET: U5P; 1.30A {Momordica charantia} SCOP: d.124.1.1 PDB: 1bk7_A* 1ucc_A* 1uca_A* 1v9h_A* 1j1f_A* 1ucg_A 1j1g_A* Length = 190

 Score =  120 bits (301), Expect = 2e-34
 Identities = 48/198 (24%), Positives = 79/198 (39%), Gaps = 29/198 (14%)

Query: 23  FDHFWLVQVWPSGYCLQANCSQTSDR----FIIHGLW----------------AVNVVDK 62
           FD FW VQ WP   C               F IHGLW                 +  +  
Sbjct: 1   FDSFWFVQQWPPAVCSFQKSGSCPGSGLRTFTIHGLWPQQSGTSLTNCPGSPFDITKISH 60

Query: 63  TLPDLMRYWLPLNENNLSRAENFWIYQWKKHGSAAKEFIQPRDYFQMALQLAKDTDLRNT 122
               L   W  +   N    + FW ++W KHG+ ++       YF++A+ +  + D+   
Sbjct: 61  LQSQLNTLWPNVLRAN---NQQFWSHEWTKHGTCSESTFNQAAYFKLAVDMRNNYDIIGA 117

Query: 123 LQNHGAVPILPDGGSYNKRDYKAAIKNKTGHDPLLKCVKG-DDGISHLKEVIICVDDQAQ 181
           L+ H      P+G + +++  K  +K K G  P L+C       +S+L +V+ C      
Sbjct: 118 LRPHA---AGPNGRTKSRQAIKGFLKAKFGKFPGLRCRTDPQTKVSYLVQVVACFAQDGS 174

Query: 182 SFIQCAKQKDRCYFDIMF 199
           + I C   +D C  + +F
Sbjct: 175 TLIDC--TRDTCGANFIF 190

>1vcz_A RNAse NGR3; hydrolase, ribonuclease; HET: 5GP; 1.80A {Nicotiana glutinosa} PDB: 1vd1_A* 1vd3_A* Length = 217

 Score =  115 bits (288), Expect = 3e-32
 Identities = 59/213 (27%), Positives = 85/213 (39%), Gaps = 33/213 (15%)

Query: 17  TCDSSGFDHFWLVQVWPSGYCL--QANCSQTSDR----FIIHGLWAVN------------ 58
              +  FD F+ VQ WP+ YC   ++ C  T+ +    F IHGLW               
Sbjct: 2   VEFAQDFDFFYFVQQWPASYCDTRRSCCYPTTGKPDEDFSIHGLWPNYENGKWPQNCDRE 61

Query: 59  ------VVDKTLPDLMRYWLPLNENNLSRAENFWIYQWKKHGSAAKEFIQPRDYFQMALQ 112
                  +   +  + + W P      S    FW ++W KHG+ +   +  R YFQ AL 
Sbjct: 62  SSLDESEISDLISTMEKNW-PSLACPSSDGVRFWSHEWLKHGTCS--ALGERAYFQAALD 118

Query: 113 LAKDTDLRNTLQNHGAVPILPDGGSYNKRDYKAAIKNKTGHDPLLKCVKGDDGISHLKEV 172
             K ++L   L+N    P   +   Y     K AI+   GH P ++C     G   + +V
Sbjct: 119 FRKKSNLLENLKNAEITPRNGE--HYTLESIKKAIEEGVGHSPYIECNVDTQGNHQIYQV 176

Query: 173 IICVDDQAQSFIQC--AKQKDRCYFDIMFDVPP 203
            +CVD  A  FI C        C   I F  PP
Sbjct: 177 YLCVDKTATDFIDCPIFPHGRGCGSKIEF--PP 207

>1sgl_A Trichomaglin; S-like ribonuclease, X-RAY sequence, MASS SPEC analysis, hydrolase; 2.20A {Trichosanthes lepiniana} SCOP: d.124.1.1 Length = 209

 Score =  113 bits (285), Expect = 7e-32
 Identities = 44/216 (20%), Positives = 80/216 (37%), Gaps = 39/216 (18%)

Query: 19  DSSGFDHFWLVQVWPSGYCLQANC---------SQTSDRFIIHGLW-------------- 55
           D   FD+F L   W    C              + +  +F IHGL               
Sbjct: 1   DEREFDYFILALQWAGTSCRSGGACCPYNGCCKADSPTQFTIHGLRPEYSGGERPSCCTG 60

Query: 56  ---AVNVVDKTLPDLMRYWL----PLNENNLSRAENFWIYQWKKHGS-AAKEFIQPRDYF 107
                + +      L+ YW      L ++  +R E  W  Q++KHG+ A+       +YF
Sbjct: 61  GSFDPDEIMPFFGKLVEYWPTYRCALEQSCNNRKEILWGQQYEKHGTCASPVIKGEWNYF 120

Query: 108 QMALQLAKDTDLRNTLQNHGAVPILPDGGSYNKRDYKAAIKNKTGHDPLLKCVKGDDGIS 167
           +  L+L    ++   L++ G V    +   Y+ +D   A+++  G  P L+C +      
Sbjct: 121 KKTLKLFMKYNVDKALEDAGIVA--SNSKMYDLKDIVVAVESAVGARPKLRCDEE----G 174

Query: 168 HLKEVIICVDDQAQSFIQCAKQKDRCYFDIMFDVPP 203
            ++++ +C D   +    C  Q   C   +     P
Sbjct: 175 LVQKLSLCFDKDFK-PRDC-VQVGSCPRYVSLPEIP 208

>3t0o_A Ribonuclease T2, ribonuclease 6; rnaset2, alpha/beta fold, RNA cleavage, hydrol; HET: NAG; 1.59A {Homo sapiens} Length = 238

 Score =  111 bits (278), Expect = 2e-30
 Identities = 47/187 (25%), Positives = 78/187 (41%), Gaps = 22/187 (11%)

Query: 19  DSSGFDHFWLVQVWPSGYCLQAN--CSQTSDRFIIHGLWAVN------------VVDKTL 64
           D+  +    +VQ WP   C +    C    D + IHGLW                  K L
Sbjct: 6   DNHEWKKLIMVQHWPETVCEKIQNDCRDPPDYWTIHGLWPDKSEGCNRSWPFNLEEIKDL 65

Query: 65  PDLMRYWLPLNENNLSRAENFWIYQWKKHGSAAKEFIQP---RDYFQMALQLAKDTDLRN 121
              MR + P   ++      FW ++W+KHG+ A +       + YF  +L+L ++ DL +
Sbjct: 66  LPEMRAYWPDVIHSFPNRSRFWKHEWEKHGTCAAQVDALNSQKKYFGRSLELYRELDLNS 125

Query: 122 TLQNHGAVPILPDGGSYNKRDYKAAIKNKTGHDPLLKCVKG--DDGISHLKEVIICVDDQ 179
            L   G   I P    Y   D+K A+    G  P ++C+    D+ +  + ++ +C+  Q
Sbjct: 126 VLLKLG---IKPSINYYQVADFKDALARVYGVIPKIQCLPPSQDEEVQTIGQIELCLTKQ 182

Query: 180 AQSFIQC 186
            Q    C
Sbjct: 183 DQQLQNC 189

>1jy5_A CALSEPRRP; RNAse, alpha-beta protein, hydrolase; 2.05A {Calystegia sepium} SCOP: d.124.1.1 Length = 212

 Score =  110 bits (276), Expect = 2e-30
 Identities = 45/214 (21%), Positives = 72/214 (33%), Gaps = 41/214 (19%)

Query: 23  FDHFWLVQVWPSGYCL---------QANCSQTSDRFIIHGLWA----------------- 56
           FD+F L   W    CL           + S+    F I GLW                  
Sbjct: 5   FDYFTLALTWSGTECLSVKDSCPTNACSRSEVETGFTIKGLWPDYDDGTWPSCCEGAKYD 64

Query: 57  VNVVDKTLPDLMRYWLPL----NENNLSRAENFWIYQWKKHGS-AAKEFIQPRDYFQMAL 111
            N +     DL +YW       +    S   +   Y+W KHG+ ++       +YF   L
Sbjct: 65  QNEISILSNDLSKYWPSYSCPSSSACGSFDASDLAYEWAKHGTCSSPVLGNQYEYFSTTL 124

Query: 112 QLAKDTDLRNTLQNHGAVPILPDGGSYNKRDYKAAIKNKTGHDPLLKCVKGDDGISHLKE 171
            L    ++   L   G +P   +   Y      +AI++     P++KC         +++
Sbjct: 125 MLYFKYNISEILSESGYLP--SNTAEYKVEGIMSAIQSALRVTPVVKCKSD-----AVEQ 177

Query: 172 VIICVDDQAQSFIQCAKQKDRCYFDIMFDVPPRT 205
           V IC D   Q   +C      C   +    P + 
Sbjct: 178 VQICFDKTLQ-LQECPSTASTCPSLVSL--PIKN 208

>1iqq_A S3-RNAse; japanese PEAR, SELF-incompatibilit family ribonuclease, hydrolase; HET: NAG BMA MAN; 1.50A {Pyrus pyrifolia} SCOP: d.124.1.1 Length = 200

 Score =  103 bits (257), Expect = 7e-28
 Identities = 43/192 (22%), Positives = 66/192 (34%), Gaps = 29/192 (15%)

Query: 23  FDHFWLVQVWPSGYCLQANC---SQTSDRFIIHGLWAVN----------------VVDKT 63
           +D+F   Q +    C              F +HGLW  N                     
Sbjct: 1   YDYFQFTQQYQLAVCNSNRTLCKDPPDKLFTVHGLWPSNMVGPDPSKCPIKNIRKREKLL 60

Query: 64  LPDLMRYWLPLNENNLSRAENFWIYQWKKHGS-AAKEFIQPRDYFQMALQ--LAKDTDLR 120
              L   W  + +   ++   FW  +W KHGS           YF+  ++  ++K  ++ 
Sbjct: 61  EHQLEIIWPNVFDR--TKNNLFWDKEWMKHGSCGYPTIDNENHYFETVIKMYISKKQNVS 118

Query: 121 NTLQNHGAVPILPDGGSYNKRDYKAAIKNK-TGHDPLLKCVKGDDGISHLKEVIICVDDQ 179
             L       I PDG      D + AI+N      P LKC K     + L E+ +C D  
Sbjct: 119 RILSKAK---IEPDGKKRALLDIENAIRNGADNKKPKLKCQK-KGTTTELVEITLCSDKS 174

Query: 180 AQSFIQCAKQKD 191
            + FI C    +
Sbjct: 175 GEHFIDCPHPFE 186

>1bol_A Protein (ribonuclease RH); ribonucleases, hydrolase; 2.00A {Rhizopus niveus} SCOP: d.124.1.1 Length = 222

 Score = 79.9 bits (196), Expect = 1e-18
 Identities = 45/226 (19%), Positives = 76/226 (33%), Gaps = 61/226 (26%)

Query: 17  TCDSSGFDHFWLVQVWPSGYCLQANCSQTSDRFIIHGLW--------------------- 55
           TC S  +    L   W  GY          + F +HGLW                     
Sbjct: 18  TCCSPEYGLVVLNMQWAPGYGP-------DNAFTLHGLWPDKCSGAYAPSGGCDSNRASS 70

Query: 56  -----AVNVVDKTLPDLMRYWLPLNENNLSRAENFWIYQWKKHGS-----------AAKE 99
                  +        ++ YW     NN      FW ++W KHG+             +E
Sbjct: 71  SIASVIKSKDSSLYNSMLTYWPSNQGNN----NVFWSHEWSKHGTCVSTYDPDCYDNYEE 126

Query: 100 FIQPRDYFQMALQLAKDTDLRNTLQNHGAVPILPDGGSYNKRDYKAAIKNKTGHDPLLKC 159
                DYFQ A+ L    ++     ++G  P    GG+Y   + ++AI++  G    + C
Sbjct: 127 GEDIVDYFQKAMDLRSQYNVYKAFSSNGITP----GGTYTATEMQSAIESYFGAKAKIDC 182

Query: 160 VKGDDGISHLKEVIICVDDQAQ-SFIQC-AKQKDRCYFDIMFDVPP 203
             G      L +V +    + + +++   A     C  D+ +  P 
Sbjct: 183 SSG-----TLSDVALYFYVRGRDTYVITDALSTGSCSGDVEY--PT 221

>3d3z_A Actibind; RNAse, hydrolase; HET: NAG D3Z; 1.70A {Aspergillus niger} Length = 247

 Score = 78.4 bits (192), Expect = 6e-18
 Identities = 37/211 (17%), Positives = 70/211 (33%), Gaps = 31/211 (14%)

Query: 16  TTCDSSGFDHFWLVQVWPSGYC--LQANCSQTSDRFIIHGLWAVNVVDKTLPDLMRYWLP 73
                   D + +  +WP       Q  C ++ +   I  +       + L  +  YW  
Sbjct: 38  YDPSDGPSDSWTIHGLWPDNCDGTYQEYCDESREYSNITSILEAQNRTELLSYMKEYWP- 96

Query: 74  LNENNLSRAENFWIYQWKKHGSAAKEFIQP-----------RDYFQMALQLAKDTDLRNT 122
            +       E+FW ++W KHG+                    D+FQ  + L K  D    
Sbjct: 97  -DYEGADEDESFWEHEWNKHGTCINTIEPSCYTDYYAQEEVGDFFQQVVDLFKTLDSYTA 155

Query: 123 LQNHGAVPILPDGGSYNKRDYKAAIKNKT-GHDPLLKCVKGDDGISHLKEVIICVD---- 177
           L + G  P   +  +Y   D + A+     G+ P + C  G      L ++    +    
Sbjct: 156 LSDAGITP--SEDATYKLSDIEDALAAIHDGYPPYVGCEDG-----ALSQLYYYFNVKGS 208

Query: 178 DQAQSFIQC-AKQKDRC-YFDIMFDVPPRTN 206
               +++     +   C    I +  PP+ +
Sbjct: 209 AIGGTYVASERLEDSNCKDSGIKY--PPKYS 237

>2pqx_A Ribonuclease I; hydrolase; HET: MES; 1.42A {Escherichia coli} PDB: 2ea1_A* 2pqy_A* 2z70_A* Length = 245

 Score = 75.3 bits (184), Expect = 6e-17
 Identities = 37/218 (16%), Positives = 63/218 (28%), Gaps = 60/218 (27%)

Query: 14  LATTCDSSG-FDHFWLVQVWPSGYC---------------LQANCSQTSDRFIIHGLW-- 55
           LA      G FD + L   W +G+C               LQ   +  +D   +HGLW  
Sbjct: 1   LALQAKQYGDFDRYVLALSWQTGFCQSQHDRNRNERDECRLQTETTNKADFLTVHGLWPG 60

Query: 56  --------------------AVNVVDKTLPDLMRYWLPLNENNLSRA------------- 82
                               A   +               E  LS               
Sbjct: 61  LPKSVAARGVDERRWMRFGCATRPIPNLPEARASRMCSSPETGLSLETAAKLSEVMPGAG 120

Query: 83  --ENFWIYQWKKHGSAAKEFIQPRDYFQMALQLAKDTDLRNTLQNHGAVPILPDGGSYNK 140
                  Y++ KHG+       P  YF   ++L ++       +          G + ++
Sbjct: 121 GRSCLERYEYAKHGACF--GFDPDAYFGTMVRLNQEIKESEAGKFLAD----NYGKTVSR 174

Query: 141 RDYKAAIKNKTGHDPLLK-CVKGDDGISHLKEVIICVD 177
           RD+ AA     G + +    +      ++L E+ I + 
Sbjct: 175 RDFDAAFAKSWGKENVKAVKLTCQGNPAYLTEIQISIK 212

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	206
1iyb_A	208	Ribonuclease, ribonuclease M5; hydrolase; HET: 5GP	100.0
1vcz_A	217	RNAse NGR3; hydrolase, ribonuclease; HET: 5GP; 1.8	100.0
1ioo_A	196	SF11-RNAse; SELF-incompatibility ribonuclease, hyd	100.0
1sgl_A	209	Trichomaglin; S-like ribonuclease, X-RAY sequence,	100.0
1jy5_A	212	CALSEPRRP; RNAse, alpha-beta protein, hydrolase; 2	100.0
1ucd_A	190	Ribonuclease MC; alpha plus beta, hydrolase; HET:	100.0
3t0o_A	238	Ribonuclease T2, ribonuclease 6; rnaset2, alpha/be	100.0
1iqq_A	200	S3-RNAse; japanese PEAR, SELF-incompatibilit famil	100.0
1bol_A	222	Protein (ribonuclease RH); ribonucleases, hydrolas	100.0
2pqx_A	245	Ribonuclease I; hydrolase; HET: MES; 1.42A {Escher	100.0
3d3z_A	247	Actibind; RNAse, hydrolase; HET: NAG D3Z; 1.70A {A	100.0
4dvk_A	165	E(RNS) glycoprotein; T2 ribonuclease, virus envelo	99.81

>1iyb_A Ribonuclease, ribonuclease M5; hydrolase; HET: 5GP; 1.50A {Nicotiana glutinosa} SCOP: d.124.1.1 PDB: 1dix_A

Probab=100.00  E-value=3.9e-59  Score=385.87  Aligned_cols=181  Identities=33%  Similarity=0.656  Sum_probs=158.3

Q ss_pred             CCCCCccEEEEEEecccccccCCC-CCCC-----CCCcEEeeeecccc------------------CCCcchhhhcccCc
Q 042583           18 CDSSGFDHFWLVQVWPSGYCLQAN-CSQT-----SDRFIIHGLWAVNV------------------VDKTLPDLMRYWLP   73 (206)
Q Consensus        18 ~~~~~fD~~~l~l~W~p~~C~~~~-C~~p-----~~~ftIHGLWP~~~------------------~~~l~~~L~~~Wp~   73 (206)
                      ..+++||||+|||+|||+||..++ |..|     ..+||||||||++.                  +++++++|+++||+
T Consensus         3 ~~~~~fD~~~l~l~Wpp~~C~~~~~cc~p~~~~~~~~ftIHGLWP~~~~g~~p~~C~~~~~~~~~~i~~l~~~L~~~Wp~   82 (208)
T 1iyb_A            3 EFAQDFDFFYFVQQWPGSYCDTKQSCCYPKTGKPASDFGIHGLWPNNNDGSYPSNCDSNSPYDQSQVSDLISRMQQNWPT   82 (208)
T ss_dssp             CCCCSCSEEEEEEECHHHHSSSSSCCCCCTTCSCCSSCEEEEEEEECTTSCCCBSCCTTSCCCGGGGGGGHHHHHHHSCC
T ss_pred             ccCCCceEEEEEEeCChHHhcCCCCCCCCCCCCCCCCCEEccccCCCCCCCCCCCCCCCCCCCchhcchhhhHhhccCCC
Confidence            357899999999999999998765 4443     47999999999864                  12467789999999


Q ss_pred             CcCCCchhhHhHHhhhccceeecccCCCCHHHHHHHHHHHHHhCChHHHHhhCCCCCCCCCCCcccHHHHHHHHHHhhCC
Q 042583           74 LNENNLSRAENFWIYQWKKHGSAAKEFIQPRDYFQMALQLAKDTDLRNTLQNHGAVPILPDGGSYNKRDYKAAIKNKTGH  153 (206)
Q Consensus        74 l~~~~~~~~~~fW~hEW~KHGtCs~~~~~~~~YF~~al~l~~~~~i~~~L~~~gI~Ps~~~~~~y~~~~i~~ai~~~~g~  153 (206)
                      +.....++. .||+|||+|||||++.+.+|.+||++|++|++++|++++|+++||+|   ++++|++++|++||++++|.
T Consensus        83 l~~~~~~~~-~fW~hEw~KHGTC~~~~~~q~~YF~~a~~l~~~~~~~~~L~~~gI~P---~~~~~t~~~I~~Ai~~~~g~  158 (208)
T 1iyb_A           83 LACPSGTGS-AFWSHEWEKHGTCAENVFDQHGYFKKALDLKNQINLLEILQGAGIHP---DGGFYSLNSIKNAIRSAIGY  158 (208)
T ss_dssp             CCSSCCCSH-HHHHHHHHHTGGGGTTTCCHHHHHHHHHHHHHHCCHHHHHHHTTCCS---SSCEEEHHHHHHHHHHHHSS
T ss_pred             cccCCCCcc-hHHHhhccCCeeeCccccCHHHHHHHHHHHHHHcChHHHHHHCCccc---CCceEeHHHHHHHHHHHhCC
Confidence            974333334 89999999999999977799999999999999999999999999999   48899999999999999999


Q ss_pred             CceEEeeeCCCCCCcEEEEEEEEecCCCceecCCCCCC-CCCCceEecCC
Q 042583          154 DPLLKCVKGDDGISHLKEVIICVDDQAQSFIQCAKQKD-RCYFDIMFDVP  202 (206)
Q Consensus       154 ~p~l~C~~~~~~~~~L~Ev~iC~~~~~~~~i~Cp~~~~-~C~~~i~~P~~  202 (206)
                      .|.|+|.++.+|..+|.||+||||+++.++|+||.... .||+.|.||+|
T Consensus       159 ~p~l~C~~~~~~~~~L~Ev~iC~~~~~~~~i~C~~~~~~~C~~~i~~p~f  208 (208)
T 1iyb_A          159 APGIECNVDESGNSQLYQIYICVDGSGSNLIECPIFPRGKCGSSIEFPTF  208 (208)
T ss_dssp             CCEEEEEECTTCCEEEEEEEEEEETTSSSBCCCSCCCCCCCCSEEECCCC
T ss_pred             CeEEEEeeCCCCCeEEEEEEEEecCCCCeeecCCCCCCCCCCCCcCcCCC
Confidence            99999998777778999999999999766999998644 49999999987

>1vcz_A RNAse NGR3; hydrolase, ribonuclease; HET: 5GP; 1.80A {Nicotiana glutinosa} PDB: 1vd1_A* 1vd3_A*

Probab=100.00  E-value=4.1e-58  Score=382.09  Aligned_cols=181  Identities=31%  Similarity=0.647  Sum_probs=156.3

Q ss_pred             CCCCCccEEEEEEecccccccCCC-CCCC-----CCCcEEeeeecccc------------------CCCcchhhhcccCc
Q 042583           18 CDSSGFDHFWLVQVWPSGYCLQAN-CSQT-----SDRFIIHGLWAVNV------------------VDKTLPDLMRYWLP   73 (206)
Q Consensus        18 ~~~~~fD~~~l~l~W~p~~C~~~~-C~~p-----~~~ftIHGLWP~~~------------------~~~l~~~L~~~Wp~   73 (206)
                      ..+++||||+|||+|||+||..++ |..|     ..+||||||||++.                  +++++++|+++||+
T Consensus         3 ~~~~~fDy~~l~l~Wpp~~C~~~~~cc~p~~~~p~~~ftIHGLWP~~~~g~~p~~C~~~~~~~~~~~~~l~~~L~~~Wp~   82 (217)
T 1vcz_A            3 EFAQDFDFFYFVQQWPASYCDTRRSCCYPTTGKPDEDFSIHGLWPNYENGKWPQNCDRESSLDESEISDLISTMEKNWPS   82 (217)
T ss_dssp             --CCSCSEEEEEEECHHHHSSSSSCCCCCTTCSCCSSCEEEEEEEECTTSCCCCCCCTTCCCCGGGGGGGHHHHHHHSCC
T ss_pred             ccCCCccEEEEEEeCChhhcCCCCCCCCCCCCCCCCCcEEEcccCCCCCCCCCCCCCCccCCChhhhhhhhhhhhccCcc
Confidence            357999999999999999998875 4443     47999999999754                  23456679999999


Q ss_pred             CcCCCchhhHhHHhhhccceeecccCCCCHHHHHHHHHHHHHhCChHHHHhhCCCCCCCCCCCcccHHHHHHHHHHhhCC
Q 042583           74 LNENNLSRAENFWIYQWKKHGSAAKEFIQPRDYFQMALQLAKDTDLRNTLQNHGAVPILPDGGSYNKRDYKAAIKNKTGH  153 (206)
Q Consensus        74 l~~~~~~~~~~fW~hEW~KHGtCs~~~~~~~~YF~~al~l~~~~~i~~~L~~~gI~Ps~~~~~~y~~~~i~~ai~~~~g~  153 (206)
                      +.....++. .||+|||+|||||++  .+|.+||++|++|++++|++++|+++||+||  +|++|++++|++||++++|.
T Consensus        83 l~~~~~~~~-~fW~hEw~KHGTC~~--~~~~~YF~~a~~l~~~~n~~~~L~~~gI~Ps--~g~~~t~~~I~~Ai~~~~g~  157 (217)
T 1vcz_A           83 LACPSSDGV-RFWSHEWLKHGTCSA--LGERAYFQAALDFRKKSNLLENLKNAEITPR--NGEHYTLESIKKAIEEGVGH  157 (217)
T ss_dssp             CSSSCCCSH-HHHHHHHHHTGGGTT--SCHHHHHHHHHHHHHHHCHHHHHHHTTCCCE--EEEEEEHHHHHHHHHHHHSS
T ss_pred             cccCCCCcc-hHHhhhccCCeecCC--CCHHHHHHHHHHHHHHcccHHHHHHCCCccC--cCccccHHHHHHHHHHHHCC
Confidence            974333334 899999999999999  6999999999999999999999999999996  68899999999999999999


Q ss_pred             CceEEeeeCCCCCCcEEEEEEEEecCCCceecCCCCCC--CCCCceEecCCC
Q 042583          154 DPLLKCVKGDDGISHLKEVIICVDDQAQSFIQCAKQKD--RCYFDIMFDVPP  203 (206)
Q Consensus       154 ~p~l~C~~~~~~~~~L~Ev~iC~~~~~~~~i~Cp~~~~--~C~~~i~~P~~~  203 (206)
                      .|.|+|.++.+|..+|.||+||||+++..+|+||....  .|++.|.||++.
T Consensus       158 ~p~l~C~~~~~~~~~L~Ev~iC~~~~~~~~i~C~~~~~~~~C~~~i~~p~~~  209 (217)
T 1vcz_A          158 SPYIECNVDTQGNHQIYQVYLCVDKTATDFIDCPIFPHGRGCGSKIEFPPFS  209 (217)
T ss_dssp             CCEEEEEECTTSCEEEEEEEEEEETTSSSEECCSSCCCCCCCCSEEEECCC-
T ss_pred             CeEEEEeecCCCCeEEEEEEEEecCCCCeeeeCCCCCCCCCCCCCeEEcCCC
Confidence            99999998777778999999999999766999997543  499999999984

>1ioo_A SF11-RNAse; SELF-incompatibility ribonuclease, hydrolase; HET: NAG BMA MAN; 1.55A {Nicotiana alata} SCOP: d.124.1.1

Probab=100.00  E-value=1e-57  Score=374.22  Aligned_cols=174  Identities=34%  Similarity=0.679  Sum_probs=152.7

Q ss_pred             CccEEEEEEecccccccCCCCCCC-CCCcEEeeeecccc-------C--C-------CcchhhhcccCcCcCCCc---hh
Q 042583           22 GFDHFWLVQVWPSGYCLQANCSQT-SDRFIIHGLWAVNV-------V--D-------KTLPDLMRYWLPLNENNL---SR   81 (206)
Q Consensus        22 ~fD~~~l~l~W~p~~C~~~~C~~p-~~~ftIHGLWP~~~-------~--~-------~l~~~L~~~Wp~l~~~~~---~~   81 (206)
                      +||||+|||+|||+||..++|..+ +.+||||||||++.       .  .       +++++|+++||++...+.   +.
T Consensus         1 ~fDy~~l~l~Wpp~~C~~~~C~~~~p~~ftIHGLWP~~~~~~p~~C~~~~~~~~~~~~l~~~L~~~Wp~l~~~~~~~~~~   80 (196)
T 1ioo_A            1 DFEYLQLVLTWPASFCYANHCERIAPNNFTIHGLWPDNVKTRLHNCKPKPTYSYFTGKMLNDLDKHWMQLKFEQDYGRTE   80 (196)
T ss_dssp             CCSEEEEEEECHHHHHHHSCCSSCCCSSCEEEEEEEECSSSCCCSCSSCCCCCCCCHHHHHHHHHHTCCTTSCHHHHHHH
T ss_pred             CceEEEEEeeCCHHHccCCCCCCCCCCCcEEeceEECCCCCCCCcCCCCCCcCchHHHHHHHHhccCCCCCccccccccc
Confidence            599999999999999998889886 78999999999874       1  1       357789999999986531   11


Q ss_pred             hHhHHhhhccceeecccCCCCHHHHHHHHHHHHHhCChHHHHhhCCCCCCCCCCCcccHHHHHHHHHHhhCCCceEEeee
Q 042583           82 AENFWIYQWKKHGSAAKEFIQPRDYFQMALQLAKDTDLRNTLQNHGAVPILPDGGSYNKRDYKAAIKNKTGHDPLLKCVK  161 (206)
Q Consensus        82 ~~~fW~hEW~KHGtCs~~~~~~~~YF~~al~l~~~~~i~~~L~~~gI~Ps~~~~~~y~~~~i~~ai~~~~g~~p~l~C~~  161 (206)
                      . .||+|||+|||||++.+++|.+||++|++|++++|++++|+++||+|    +.+|++++|++||++++|..|.|+|.+
T Consensus        81 ~-~fW~hEw~KHGTC~~~~~~q~~YF~~a~~L~~~~n~~~~L~~~gI~P----~~~~t~~~I~~Ai~~~~g~~p~l~C~~  155 (196)
T 1ioo_A           81 Q-PSWKYQYIKHGSCCQKRYNQNTYFGLALRLKDKFDLLRTLQTHRIIP----GSSYTFQDIFDAIKTVSQENPDIKCAE  155 (196)
T ss_dssp             C-HHHHHHHHHTGGGCTTTCCHHHHHHHHHHHHHTCCHHHHHHHTTCCT----TEEECHHHHHHHHHHHHSSCCEEEEEC
T ss_pred             c-hHHHhhCcCCcCcCCCcCCHHHHHHHHHHHHHHCCHHHHHHHCCCcc----CCCcCHHHHHHHHHHHhCCCeEEEeee
Confidence            3 79999999999999977799999999999999999999999999999    556999999999999999999999988


Q ss_pred             CCCCCCcEEEEEEEEecCCCceecCCCCCCCC--CCceEecC
Q 042583          162 GDDGISHLKEVIICVDDQAQSFIQCAKQKDRC--YFDIMFDV  201 (206)
Q Consensus       162 ~~~~~~~L~Ev~iC~~~~~~~~i~Cp~~~~~C--~~~i~~P~  201 (206)
                      +.+|..+|.||+||||+++..+|+||... .|  +..|.||+
T Consensus       156 ~~~~~~~L~Ev~iC~~~~~~~~i~Cp~~~-~C~~~~~i~fp~  196 (196)
T 1ioo_A          156 VTKGTPELYEIGICFTPNADSMFRCPQSD-TCDKTAKVLFRR  196 (196)
T ss_dssp             SSTTCCEEEEEEEEECTTSSSEECCCCCC-CSCTTSCEEECC
T ss_pred             cCCCCeEEEEEEEEEeCCCCEEeCCcCCC-CCCCCCCeecCC
Confidence            65556899999999999997799999754 39  45899985

>1sgl_A Trichomaglin; S-like ribonuclease, X-RAY sequence, MASS SPEC analysis, hydrolase; 2.20A {Trichosanthes lepiniana} SCOP: d.124.1.1

Probab=100.00  E-value=2.8e-57  Score=374.99  Aligned_cols=176  Identities=24%  Similarity=0.475  Sum_probs=151.6

Q ss_pred             CCCccEEEEEEecccccccCC--------CCCCC-CCCcEEeeeecccc-----------------CCCcchhhhcccCc
Q 042583           20 SSGFDHFWLVQVWPSGYCLQA--------NCSQT-SDRFIIHGLWAVNV-----------------VDKTLPDLMRYWLP   73 (206)
Q Consensus        20 ~~~fD~~~l~l~W~p~~C~~~--------~C~~p-~~~ftIHGLWP~~~-----------------~~~l~~~L~~~Wp~   73 (206)
                      +++||||+|||+|||+||...        .|..+ ..+||||||||++.                 +++++++|+++||+
T Consensus         2 ~~~fD~~~l~l~Wpp~~C~~~~~~~~~~~~C~~~~~~~ftIHGLWP~~~~g~~p~~C~~~~~~~~~~~~l~~~L~~~Wp~   81 (209)
T 1sgl_A            2 EREFDYFILALQWAGTSCRSGGACCPYNGCCKADSPTQFTIHGLRPEYSGGERPSCCTGGSFDPDEIMPFFGKLVEYWPT   81 (209)
T ss_dssp             --CCSEEEEEEEEHHHHTSSCCCCCTTBTTCSSSCCCCEEEEEEEECCCSSCCCCCCSCCCCCGGGGGGGHHHHHHHSCB
T ss_pred             CCCceEEEEEEECCHHHhcCCccCCCCCCCCCCCCCCCcEEccccCCCCCCCCCCCCCCCcCCchhhhhHHHHHHccCcC
Confidence            579999999999999999864        38765 79999999999873                 23467899999999


Q ss_pred             CcCCC-----chhhHhHHhhhccceeecccCCC-CHHHHHHHHHHHHHhCChHHHHhhCCCCCCCCCCCcccHHHHHHHH
Q 042583           74 LNENN-----LSRAENFWIYQWKKHGSAAKEFI-QPRDYFQMALQLAKDTDLRNTLQNHGAVPILPDGGSYNKRDYKAAI  147 (206)
Q Consensus        74 l~~~~-----~~~~~~fW~hEW~KHGtCs~~~~-~~~~YF~~al~l~~~~~i~~~L~~~gI~Ps~~~~~~y~~~~i~~ai  147 (206)
                      +..+.     .++. .||+|||+|||||++.++ +|.+||++|++|++++|++++|+++||+|+  .+++|++++|++||
T Consensus        82 l~~~~~~~~~~~~~-~fW~hEw~KHGTC~~~~~~~~~~YF~~a~~L~~~~~l~~~L~~~gI~P~--~g~~yt~~~I~~Ai  158 (209)
T 1sgl_A           82 YRCALEQSCNNRKE-ILWGQQYEKHGTCASPVIKGEWNYFKKTLKLFMKYNVDKALEDAGIVAS--NSKMYDLKDIVVAV  158 (209)
T ss_dssp             SCSSCEECGGGCEE-CHHHHHHHHTGGGGTTTSCSHHHHHHHHHHHHHHTCHHHHHHHHTCCCC--SSCEEEHHHHHHHH
T ss_pred             cccccccccCCCcc-hHHHHhhhcCccccccccccHHHHHHHHHHHHHHcChHHHHHHCCCcCC--CCccccHHHHHHHH
Confidence            96211     1113 799999999999999766 999999999999999999999999999997  68899999999999


Q ss_pred             HHhhCCCceEEeeeCCCCCCcEEEEEEEEecCCCceecCCCCCCCCCCceEecCCCC
Q 042583          148 KNKTGHDPLLKCVKGDDGISHLKEVIICVDDQAQSFIQCAKQKDRCYFDIMFDVPPR  204 (206)
Q Consensus       148 ~~~~g~~p~l~C~~~~~~~~~L~Ev~iC~~~~~~~~i~Cp~~~~~C~~~i~~P~~~~  204 (206)
                      ++++|.+|.|+|.++    ++|.||+||||+++. +|+|+ ..++||+.|.||+++.
T Consensus       159 ~~~~g~~p~l~C~~~----~~L~Ev~iC~~~~~~-~i~C~-~~~~C~~~i~~p~~~~  209 (209)
T 1sgl_A          159 ESAVGARPKLRCDEE----GLVQKLSLCFDKDFK-PRDCV-QVGSCPRYVSLPEIPD  209 (209)
T ss_dssp             HHHHSSCCEEEECTT----SBEEEEEEEEETTCC-EECCC-CCCCSCSEEECCCCCC
T ss_pred             HHHhCCCeEEEECCC----CeEEEEEEEeCCCcc-EeCCC-CCCCCCCCeEeCCCCC
Confidence            999999999999763    599999999999976 89995 3334999999999874

>1jy5_A CALSEPRRP; RNAse, alpha-beta protein, hydrolase; 2.05A {Calystegia sepium} SCOP: d.124.1.1

Probab=100.00  E-value=1.5e-56  Score=371.43  Aligned_cols=177  Identities=25%  Similarity=0.505  Sum_probs=151.8

Q ss_pred             CCCccEEEEEEecccccccCCC-------CC--CCCCCcEEeeeecccc-----------------CCCcchhhhcccCc
Q 042583           20 SSGFDHFWLVQVWPSGYCLQAN-------CS--QTSDRFIIHGLWAVNV-----------------VDKTLPDLMRYWLP   73 (206)
Q Consensus        20 ~~~fD~~~l~l~W~p~~C~~~~-------C~--~p~~~ftIHGLWP~~~-----------------~~~l~~~L~~~Wp~   73 (206)
                      .++||||+|||+|||+||...+       |.  .|..+||||||||++.                 +++++++|+++||+
T Consensus         2 ~~~fDy~~l~l~Wpp~~C~~~~~~c~~~~C~~~~~~~~ftIHGLWP~~~~g~~p~~C~~~~~~~~~i~~l~~~L~~~WP~   81 (212)
T 1jy5_A            2 HKEFDYFTLALTWSGTECLSVKDSCPTNACSRSEVETGFTIKGLWPDYDDGTWPSCCEGAKYDQNEISILSNDLSKYWPS   81 (212)
T ss_dssp             CCCCCEEEEEEEEHHHHTCC----CTTBGGGCTTSCSCEEEEEEEEECTTSCCCCSCSSCCCCGGGGGGGHHHHHHHSCB
T ss_pred             CCCceEEEEEEEcCHHHhcCCCCCCCCccccCCCCCCccEEeeeecccCCCCCCCCCCCCCCChhhhHHHHHHHHhhCCc
Confidence            5899999999999999998753       32  2478999999999864                 34577899999999


Q ss_pred             CcCCCch-----hhHhHHhhhccceeecccCC-CCHHHHHHHHHHHHHhCChHHHHhhCCCCCCCCCCCcccHHHHHHHH
Q 042583           74 LNENNLS-----RAENFWIYQWKKHGSAAKEF-IQPRDYFQMALQLAKDTDLRNTLQNHGAVPILPDGGSYNKRDYKAAI  147 (206)
Q Consensus        74 l~~~~~~-----~~~~fW~hEW~KHGtCs~~~-~~~~~YF~~al~l~~~~~i~~~L~~~gI~Ps~~~~~~y~~~~i~~ai  147 (206)
                      +...+.+     .. .||+|||+|||||++.+ .+|.+||++|++|++++|++++|+++||+||  ++++|++++|++||
T Consensus        82 l~~~~~~~~~~~~~-~fW~hEw~KHGTC~~~~~~~~~~YF~~a~~l~~~~nl~~~L~~~gI~Ps--~g~~yt~~~I~~Ai  158 (212)
T 1jy5_A           82 YSCPSSSACGSFDA-SDLAYEWAKHGTCSSPVLGNQYEYFSTTLMLYFKYNISEILSESGYLPS--NTAEYKVEGIMSAI  158 (212)
T ss_dssp             CCSSCEEETTEEES-SHHHHHHHHTGGGGTTTSCSHHHHHHHHHHHHHHSCHHHHHHTTTCCCC--SSCCEEHHHHHHHH
T ss_pred             ccccccccccccch-hHHHHhhhhCceeCcccccCHHHHHHHHHHHHHhcCHHHHHHHcCCcCC--CCceEcHHHHHHHH
Confidence            9754321     12 69999999999999975 4999999999999999999999999999997  68899999999999


Q ss_pred             HHhhCCCceEEeeeCCCCCCcEEEEEEEEecCCCceecCCCCCCCCCCceEecCCCCC
Q 042583          148 KNKTGHDPLLKCVKGDDGISHLKEVIICVDDQAQSFIQCAKQKDRCYFDIMFDVPPRT  205 (206)
Q Consensus       148 ~~~~g~~p~l~C~~~~~~~~~L~Ev~iC~~~~~~~~i~Cp~~~~~C~~~i~~P~~~~~  205 (206)
                      ++++|..|.|+|.+     +.|.||+||||+++. +||||...++|++.|.||+++.+
T Consensus       159 ~~~~g~~p~l~C~~-----~~l~ev~lC~~~~~~-~i~C~~~~~~C~~~i~~p~~~~~  210 (212)
T 1jy5_A          159 QSALRVTPVVKCKS-----DAVEQVQICFDKTLQ-LQECPSTASTCPSLVSLPIKNTI  210 (212)
T ss_dssp             HHHHSSCCEEEEET-----TEEEEEEEEECTTSC-EECCCCCCCCSCSEEBCCCCC--
T ss_pred             HHhhCCCEEEEeCC-----CCcceEEEEEcCCCc-EecCCCCCCCCCCCEEeCCCCCC
Confidence            99999999999987     579999999999976 99999544459999999998764

>1ucd_A Ribonuclease MC; alpha plus beta, hydrolase; HET: U5P; 1.30A {Momordica charantia} SCOP: d.124.1.1 PDB: 1bk7_A* 1ucc_A* 1uca_A* 1v9h_A* 1j1f_A* 1ucg_A 1j1g_A*

Probab=100.00  E-value=1.4e-56  Score=365.92  Aligned_cols=169  Identities=30%  Similarity=0.680  Sum_probs=148.9

Q ss_pred             ccEEEEEEecccccccCC---CCCCC-CCCcEEeeeecccc----------------CCCcchhhhcccCcCcCCCchhh
Q 042583           23 FDHFWLVQVWPSGYCLQA---NCSQT-SDRFIIHGLWAVNV----------------VDKTLPDLMRYWLPLNENNLSRA   82 (206)
Q Consensus        23 fD~~~l~l~W~p~~C~~~---~C~~p-~~~ftIHGLWP~~~----------------~~~l~~~L~~~Wp~l~~~~~~~~   82 (206)
                      ||||+|||+|||+||..+   +|..| +.+||||||||+..                +++++++|+++||++...+.  .
T Consensus         1 fDy~~l~l~Wpp~~C~~~~~~~C~~~~p~~ftIHGLWPn~~~~~p~~C~~~~~~~~~~~~l~~~L~~~Wp~l~~~~~--~   78 (190)
T 1ucd_A            1 FDSFWFVQQWPPAVCSFQKSGSCPGSGLRTFTIHGLWPQQSGTSLTNCPGSPFDITKISHLQSQLNTLWPNVLRANN--Q   78 (190)
T ss_dssp             CCEEEEEEECHHHHHHTCCSSCCGGGGCCSCEEEEEEEEETTEECCSCSCCCCCGGGGGGGHHHHHHHSCCSSSSCH--H
T ss_pred             CcEEEEEEECCHHHhccCCCCCCCCCCCCCeEEEcCCCCCCCCCCCCCCcccCCccccchhhHHHHhcCCCcCCCCC--C
Confidence            899999999999999876   49774 69999999999522                23477899999999984332  3


Q ss_pred             HhHHhhhccceeecccCCCCHHHHHHHHHHHHHhCChHHHHhhCCCCCCCCCCCcccHHHHHHHHHHhhCCCceEEeeeC
Q 042583           83 ENFWIYQWKKHGSAAKEFIQPRDYFQMALQLAKDTDLRNTLQNHGAVPILPDGGSYNKRDYKAAIKNKTGHDPLLKCVKG  162 (206)
Q Consensus        83 ~~fW~hEW~KHGtCs~~~~~~~~YF~~al~l~~~~~i~~~L~~~gI~Ps~~~~~~y~~~~i~~ai~~~~g~~p~l~C~~~  162 (206)
                       .||+|||+|||||+.++++|.+||++|++|++++|++++|+++||+|+   ++.|++++|++||++++|.+|.|+|.++
T Consensus        79 -~fW~hEw~KHGTC~~~~~~~~~YF~~a~~l~~~~~~~~~L~~~~I~P~---~~~~t~~~I~~ai~~~~g~~p~l~C~~~  154 (190)
T 1ucd_A           79 -QFWSHEWTKHGTCSESTFNQAAYFKLAVDMRNNYDIIGALRPHAAGPN---GRTKSRQAIKGFLKAKFGKFPGLRCRTD  154 (190)
T ss_dssp             -HHHHHHHHHTGGGGTTTCCHHHHHHHHHHHHHTCCHHHHHGGGTCSCS---SSEEEHHHHHHHHHHHHSSCCEEEEEEC
T ss_pred             -chHHhccccCcEeCCCCCCHHHHHHHHHHHHHHcCHHHHHHHCCCCCC---CceEeHHHHHHHHHHHHCCCeEEEeccC
Confidence             899999999999998768999999999999999999999999999994   7779999999999999999999999987


Q ss_pred             CC-CCCcEEEEEEEEecCCCceecCCCCCCCCCCceEe
Q 042583          163 DD-GISHLKEVIICVDDQAQSFIQCAKQKDRCYFDIMF  199 (206)
Q Consensus       163 ~~-~~~~L~Ev~iC~~~~~~~~i~Cp~~~~~C~~~i~~  199 (206)
                      ++ +.++|.||+||||+++..+|+||.  ..|++.++|
T Consensus       155 ~~~~~~~L~Ev~iC~~~~~~~~i~Cp~--~~C~~~~~f  190 (190)
T 1ucd_A          155 PQTKVSYLVQVVACFAQDGSTLIDCTR--DTCGANFIF  190 (190)
T ss_dssp             TTTCCEEEEEEEEEEETTSSSEECCCC--CCCCSEEEC
T ss_pred             CCCCCcEEEEEEEEecCCCCeeccCCC--CCCCCCCCC
Confidence            54 457999999999999666999998  459998876

>3t0o_A Ribonuclease T2, ribonuclease 6; rnaset2, alpha/beta fold, RNA cleavage, hydrol; HET: NAG; 1.59A {Homo sapiens}

Probab=100.00  E-value=8.9e-56  Score=371.69  Aligned_cols=183  Identities=26%  Similarity=0.623  Sum_probs=150.4

Q ss_pred             CCCCccEEEEEEecccccccCC--CCCCCCCCcEEeeeecccc-------------CCCcchhhhcccCcCcCCCchhhH
Q 042583           19 DSSGFDHFWLVQVWPSGYCLQA--NCSQTSDRFIIHGLWAVNV-------------VDKTLPDLMRYWLPLNENNLSRAE   83 (206)
Q Consensus        19 ~~~~fD~~~l~l~W~p~~C~~~--~C~~p~~~ftIHGLWP~~~-------------~~~l~~~L~~~Wp~l~~~~~~~~~   83 (206)
                      ..++||||+|||||||+||...  .|..|...||||||||++.             +++++++|+++||++..+..++. 
T Consensus         6 ~~~~fD~~~lv~qWppt~C~~~~~~C~~p~~~FTIHGLWP~~~~~C~~s~~f~~~~i~~l~~~L~~~WPdl~~~~~~~~-   84 (238)
T 3t0o_A            6 DNHEWKKLIMVQHWPETVCEKIQNDCRDPPDYWTIHGLWPDKSEGCNRSWPFNLEEIKDLLPEMRAYWPDVIHSFPNRS-   84 (238)
T ss_dssp             ----CCEEEEEEECHHHHCCSSSGGGTSCCSSCEEEEEEESSCCCCCTTSCCCGGGGGGGHHHHHHHSCCCSSCCSSTH-
T ss_pred             CCCCCcEEEEEEECCCccccCCCCCCCCCccccEEccccccccCCCCCCcccchhhhhHHHHHHHhhCcccccCCCCch-
Confidence            5689999999999999999875  3998888999999999865             34678899999999974322223 


Q ss_pred             hHHhhhccceeecccC---CCCHHHHHHHHHHHHHhCChHHHHhhCCCCCCCCCCCcccHHHHHHHHHHhhCCCceEEee
Q 042583           84 NFWIYQWKKHGSAAKE---FIQPRDYFQMALQLAKDTDLRNTLQNHGAVPILPDGGSYNKRDYKAAIKNKTGHDPLLKCV  160 (206)
Q Consensus        84 ~fW~hEW~KHGtCs~~---~~~~~~YF~~al~l~~~~~i~~~L~~~gI~Ps~~~~~~y~~~~i~~ai~~~~g~~p~l~C~  160 (206)
                      .||+|||+|||||++.   +.+|.+||++|++|++++|++++|+++||+|+   +..|++++|++||++++|..|.|+|.
T Consensus        85 ~fW~hEW~KHGTC~~~~~~~~~q~~YF~~a~~L~~~~n~~~~L~~~gI~P~---~~~yt~~~I~~Ai~~~~g~~P~l~C~  161 (238)
T 3t0o_A           85 RFWKHEWEKHGTCAAQVDALNSQKKYFGRSLELYRELDLNSVLLKLGIKPS---INYYQVADFKDALARVYGVIPKIQCL  161 (238)
T ss_dssp             HHHHHHCCCCCHHHTTSGGGCSHHHHHHHHHHHHHHHCHHHHHHHTTCCCC---SSCEEHHHHHHHHHHHHSSCCEEEEE
T ss_pred             HHHHHhhhcCceecCCccccccHHHHHHHHHHHHHHcccHHHHHhcCccCC---CCcccHHHHHHHHHHHHCCCeEEEEe
Confidence            8999999999999996   34899999999999999999999999999995   55899999999999999999999998


Q ss_pred             eCCCC--CCcEEEEEEEEecCCCceecCCCCC------------------CC---CCC-ceEecCCCCC
Q 042583          161 KGDDG--ISHLKEVIICVDDQAQSFIQCAKQK------------------DR---CYF-DIMFDVPPRT  205 (206)
Q Consensus       161 ~~~~~--~~~L~Ev~iC~~~~~~~~i~Cp~~~------------------~~---C~~-~i~~P~~~~~  205 (206)
                      ++.++  .++|.||+||||+++..+||||...                  .+   |.+ -|+|||.+.|
T Consensus       162 ~~~~~~~~~~L~EV~iC~d~~~~~~idCp~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~  230 (238)
T 3t0o_A          162 PPSQDEEVQTIGQIELCLTKQDQQLQNCTEPGEQPSPKQEVWLANGAAESRGLRVCEDGPVFYPPPKKT  230 (238)
T ss_dssp             CCC---CCCEEEEEEEEEETTTCCEECCC--------------------CTTCEECCSSEEBCCCCC--
T ss_pred             cCCCCCcccEEEEEEEEeecCCCEEecCCCCCCCCccccccccccccccCCceeecCCCCccCCCCccc
Confidence            76544  3589999999999666699999643                  12   875 6899998876

>1iqq_A S3-RNAse; japanese PEAR, SELF-incompatibilit family ribonuclease, hydrolase; HET: NAG BMA MAN; 1.50A {Pyrus pyrifolia} SCOP: d.124.1.1

Probab=100.00  E-value=2e-54  Score=355.67  Aligned_cols=171  Identities=26%  Similarity=0.523  Sum_probs=146.2

Q ss_pred             ccEEEEEEecccccccCCC--CCCC-CCCcEEeeeecccc-------------C---CCcchhhhcccCcCcCCCchhhH
Q 042583           23 FDHFWLVQVWPSGYCLQAN--CSQT-SDRFIIHGLWAVNV-------------V---DKTLPDLMRYWLPLNENNLSRAE   83 (206)
Q Consensus        23 fD~~~l~l~W~p~~C~~~~--C~~p-~~~ftIHGLWP~~~-------------~---~~l~~~L~~~Wp~l~~~~~~~~~   83 (206)
                      ||||+|||+|||+||...+  |..+ ..+||||||||++.             .   ++++++|+++||++... .++. 
T Consensus         1 fDy~~l~l~Wpp~~C~~~~~~C~~~~~~~ftIHGLWP~~~~g~~p~~C~~~~~~~~~~~l~~~L~~~Wp~~~~~-~~~~-   78 (200)
T 1iqq_A            1 YDYFQFTQQYQLAVCNSNRTLCKDPPDKLFTVHGLWPSNMVGPDPSKCPIKNIRKREKLLEHQLEIIWPNVFDR-TKNN-   78 (200)
T ss_dssp             CCEEEEEEEEHHHHTTSSSSCCSSCCCSSEEEEEEEEECSSSSCCCSCCCSCCCCCCHHHHHHHHHHSCCSSCG-GGHH-
T ss_pred             CeEEEEEEECChHHhcCCCCCCCCCCCCCeEEeecccccCCCCCCCCCCchhcCccchhhhhhhhccCCCcccC-CCCC-
Confidence            8999999999999998753  9875 67899999999875             1   23567899999999643 2224 


Q ss_pred             hHHhhhccceeecccC-CCCHHHHHHHHHHHH--HhCChHHHHhhCCCCCCCCCCCcccHHHHHHHHHHhh-CCCceEEe
Q 042583           84 NFWIYQWKKHGSAAKE-FIQPRDYFQMALQLA--KDTDLRNTLQNHGAVPILPDGGSYNKRDYKAAIKNKT-GHDPLLKC  159 (206)
Q Consensus        84 ~fW~hEW~KHGtCs~~-~~~~~~YF~~al~l~--~~~~i~~~L~~~gI~Ps~~~~~~y~~~~i~~ai~~~~-g~~p~l~C  159 (206)
                      .||+|||+|||||+.+ +++|.+||++|++|+  +++|++++|+++||+|+   ++.|++++|++||++++ |..|.|+|
T Consensus        79 ~fW~hEw~KHGTC~~~~~~~~~~YF~~a~~l~~~~k~n~~~~L~~~~I~P~---~~~~t~~~I~~Ai~~~~~g~~p~l~C  155 (200)
T 1iqq_A           79 LFWDKEWMKHGSCGYPTIDNENHYFETVIKMYISKKQNVSRILSKAKIEPD---GKKRALLDIENAIRNGADNKKPKLKC  155 (200)
T ss_dssp             HHHHHHHHHTGGGSTTTSCSHHHHHHHHHHHHTTTCCCHHHHHHHTTCCSS---CCEECHHHHHHHHHTTTTTCCCEEEE
T ss_pred             hHHHhhhhCCcCcCCcccCCHHHHHHHHHHHHhhcccCHHHHHHHcCCccC---CCeecHHHHHHHHHHhcCCCceEEEE
Confidence            8999999999999955 489999999999999  77999999999999995   78899999999999999 89999999


Q ss_pred             eeCCCCCCcEEEEEEEEecCCCceecCCCC--C---CCCCC-ceEe
Q 042583          160 VKGDDGISHLKEVIICVDDQAQSFIQCAKQ--K---DRCYF-DIMF  199 (206)
Q Consensus       160 ~~~~~~~~~L~Ev~iC~~~~~~~~i~Cp~~--~---~~C~~-~i~~  199 (206)
                      .++ .+..+|.||+||||+++.++|+||..  .   ..||+ +|.|
T Consensus       156 ~~~-~~~~~L~Ev~iC~~~~~~~~i~C~~~~~~~~~~~Cp~~~i~y  200 (200)
T 1iqq_A          156 QKK-GTTTELVEITLCSDKSGEHFIDCPHPFEPISPHYCPTNNIKY  200 (200)
T ss_dssp             EEE-TTEEEEEEEEEEECTTSSSEECCSCCCCTTSTTCCCSSCEEC
T ss_pred             eeC-CCCeEEEEEEEEEECCCCeEEeCCCCCCCCCCCCCCccCcCC
Confidence            875 34579999999999998779999874  2   23986 7876

>1bol_A Protein (ribonuclease RH); ribonucleases, hydrolase; 2.00A {Rhizopus niveus} SCOP: d.124.1.1

Probab=100.00  E-value=3.2e-50  Score=335.72  Aligned_cols=161  Identities=24%  Similarity=0.568  Sum_probs=138.1

Q ss_pred             CCccEEEEEEecccccccCCCCCCCCCCcEEeeeecccc----C----------------------CCcchhhhcccCcC
Q 042583           21 SGFDHFWLVQVWPSGYCLQANCSQTSDRFIIHGLWAVNV----V----------------------DKTLPDLMRYWLPL   74 (206)
Q Consensus        21 ~~fD~~~l~l~W~p~~C~~~~C~~p~~~ftIHGLWP~~~----~----------------------~~l~~~L~~~Wp~l   74 (206)
                      ..||||+|||+|+|++       .|..+||||||||++.    .                      ++++++|+++||++
T Consensus        22 p~fd~~~l~q~W~p~~-------~p~~~fTIHGLWP~~~~g~~pp~~~C~~s~~~~~~~~~l~~~~~~l~~~L~~~WP~l   94 (222)
T 1bol_A           22 PEYGLVVLNMQWAPGY-------GPDNAFTLHGLWPDKCSGAYAPSGGCDSNRASSSIASVIKSKDSSLYNSMLTYWPSN   94 (222)
T ss_dssp             CSSCEEEEEEECCTTS-------SCTTCCEEEEEEEECTTSCBCCTTCSCSTTCCSCHHHHHHHHCHHHHHHHHHHSCCT
T ss_pred             CCCCeEEEEEecCCCC-------CCCcceEEcceeecCcCCCCCccCCCCCcccccchhhhhhccchHHHHHHhhcCCCc
Confidence            3499999999999997       3578999999999873    0                      12345899999999


Q ss_pred             cCCCchhhHhHHhhhccceeecccCC-----------CCHHHHHHHHHHHHHhCChHHHHhhCCCCCCCCCCCcccHHHH
Q 042583           75 NENNLSRAENFWIYQWKKHGSAAKEF-----------IQPRDYFQMALQLAKDTDLRNTLQNHGAVPILPDGGSYNKRDY  143 (206)
Q Consensus        75 ~~~~~~~~~~fW~hEW~KHGtCs~~~-----------~~~~~YF~~al~l~~~~~i~~~L~~~gI~Ps~~~~~~y~~~~i  143 (206)
                      ...+   . .||+|||+|||||++.+           .++.+||++|++|++++|+.++|+++||+|    +..|++++|
T Consensus        95 ~~~~---~-~fW~hEW~KHGTC~~~~~~~c~~~y~~~~~~~~YF~~al~L~~~~n~~~~L~~~gI~P----~~~yt~~~I  166 (222)
T 1bol_A           95 QGNN---N-VFWSHEWSKHGTCVSTYDPDCYDNYEEGEDIVDYFQKAMDLRSQYNVYKAFSSNGITP----GGTYTATEM  166 (222)
T ss_dssp             TSCH---H-HHHHHHHHHTGGGCGGGSGGGCTTCCTTHHHHHHHHHHHHHHHHSCHHHHHHTTTCCS----SEEEEHHHH
T ss_pred             cccc---c-HHHHhhhhcCeeeccccCccccccccccccHHHHHHHHHHHHHHcCcHHHHHHcCCCC----CCcCcHHHH
Confidence            7432   3 89999999999998743           268899999999999999999999999999    445999999


Q ss_pred             HHHHHHhhCCCceEEeeeCCCCCCcEEEEEEEEecCC-CceecCCCCCC-CCCCceEecC
Q 042583          144 KAAIKNKTGHDPLLKCVKGDDGISHLKEVIICVDDQA-QSFIQCAKQKD-RCYFDIMFDV  201 (206)
Q Consensus       144 ~~ai~~~~g~~p~l~C~~~~~~~~~L~Ev~iC~~~~~-~~~i~Cp~~~~-~C~~~i~~P~  201 (206)
                      ++||++++|..|.|+|.+     ++|.||+|||++++ ..+++|+.... .||++|+||+
T Consensus       167 ~~Ai~~~~g~~p~l~C~~-----~~L~Ev~ic~~~~g~~~~~~~~~~~~~~C~~~i~~pp  221 (222)
T 1bol_A          167 QSAIESYFGAKAKIDCSS-----GTLSDVALYFYVRGRDTYVITDALSTGSCSGDVEYPT  221 (222)
T ss_dssp             HHHHHHHHSSCCEEEEET-----TEEEEEEEEEEEETTTEEEEECCSCCCSCCSEEEECC
T ss_pred             HHHHHHHhCCCeEEEECC-----CEEeEEEEEEEcCCCCCeEECCCCCCCCCCCCeEeCC
Confidence            999999999999999974     69999999999985 55899987643 3998999987

>2pqx_A Ribonuclease I; hydrolase; HET: MES; 1.42A {Escherichia coli} PDB: 2ea1_A* 2pqy_A* 2z70_A*

Probab=100.00  E-value=1.6e-48  Score=329.70  Aligned_cols=168  Identities=23%  Similarity=0.436  Sum_probs=139.8

Q ss_pred             CCCCCccEEEEEEecccccccCC---------CCCCC-----C-CCcEEeeeecccc-----------------------
Q 042583           18 CDSSGFDHFWLVQVWPSGYCLQA---------NCSQT-----S-DRFIIHGLWAVNV-----------------------   59 (206)
Q Consensus        18 ~~~~~fD~~~l~l~W~p~~C~~~---------~C~~p-----~-~~ftIHGLWP~~~-----------------------   59 (206)
                      ..+++||||+|||+|||+||...         +|..|     . ..||||||||++.                       
T Consensus         6 ~~~~~fDy~~LalsWppsfC~~~~~~~~~~~~~C~~p~~~~~~~~~ftIHGLWP~~~~~~~~~g~~~~~~~~~~C~~~~~   85 (245)
T 2pqx_A            6 KQYGDFDRYVLALSWQTGFCQSQHDRNRNERDECRLQTETTNKADFLTVHGLWPGLPKSVAARGVDERRWMRFGCATRPI   85 (245)
T ss_dssp             SSSCCCCEEEEEEEEHHHHHHHHHHTTCCCCHHHHSCCCCSSGGGGEEEEEEEECCCHHHHTTTCCHHHHHHHGGGCTTT
T ss_pred             CCCCCcceEEEEEecCHHHhCCCccccCCCccccCCcccCCCCCCceEEEecCCCCCCCccccccccccccccCcccCcc
Confidence            45789999999999999999863         28754     1 3399999999852                       


Q ss_pred             -------------------CCCcchhhhcccCcCcCCCchhhHhHHhhhccceeecccCCCCHHHHHHHHHHHHHhCChH
Q 042583           60 -------------------VDKTLPDLMRYWLPLNENNLSRAENFWIYQWKKHGSAAKEFIQPRDYFQMALQLAKDTDLR  120 (206)
Q Consensus        60 -------------------~~~l~~~L~~~Wp~l~~~~~~~~~~fW~hEW~KHGtCs~~~~~~~~YF~~al~l~~~~~i~  120 (206)
                                         ..+++++|+.+||++... +    .||+|||+|||||++  ++|.+||++|++|++++|+.
T Consensus        86 ~~~~~~~~~~~C~~~~~~l~~~l~~~L~~~WP~~~~~-~----~fw~hEW~KHGTC~~--~~~~~YF~~a~~l~~~~n~~  158 (245)
T 2pqx_A           86 PNLPEARASRMCSSPETGLSLETAAKLSEVMPGAGGR-S----CLERYEYAKHGACFG--FDPDAYFGTMVRLNQEIKES  158 (245)
T ss_dssp             TCCCCCCGGGGGGSCCCCCCHHHHHHHHHHCTTSSTT-T----CHHHHHHHHHTGGGT--CCHHHHHHHHHHHHHHHHHS
T ss_pred             cccccccccccccCccccCCHHHHHHHHHhCCCCCCc-c----hHHHHHhhhCCeecC--CCHHHHHHHHHHHHHHhccc
Confidence                               012456899999999643 2    799999999999999  89999999999999999764


Q ss_pred             ---HHHhhCCCCCCCCCCCcccHHHHHHHHHHhhCCCc----eEEeeeCCCCCCcEEEEEEEEecC-------CCceecC
Q 042583          121 ---NTLQNHGAVPILPDGGSYNKRDYKAAIKNKTGHDP----LLKCVKGDDGISHLKEVIICVDDQ-------AQSFIQC  186 (206)
Q Consensus       121 ---~~L~~~gI~Ps~~~~~~y~~~~i~~ai~~~~g~~p----~l~C~~~~~~~~~L~Ev~iC~~~~-------~~~~i~C  186 (206)
                         ++|+..       .|++|++++|++||++++|..|    .|+|.++   ..+|.||+||||++       +..+|+|
T Consensus       159 ~~~~~l~~~-------~g~~~t~~~I~~Ai~~~~g~~p~~~v~l~C~~~---~~~L~Ev~iC~~~~~~~~~~~~~~~i~c  228 (245)
T 2pqx_A          159 EAGKFLADN-------YGKTVSRRDFDAAFAKSWGKENVKAVKLTCQGN---PAYLTEIQISIKADAINAPLSANSFLPQ  228 (245)
T ss_dssp             HHHHHHHHT-------TTSEEEHHHHHHHHHHHHCGGGGGGEEEEEETT---TTEEEEEEEEEEGGGTTSCCCTTSBCCC
T ss_pred             hHHHHhhcC-------CCceEcHHHHHHHHHHHhCCCCCcceEEEECCC---CCEEEEEEEEEcccccCCCccccccccC
Confidence               568772       3889999999999999999876    9999863   36999999999999       5568999


Q ss_pred             CCCCCCCCCceEecCCC
Q 042583          187 AKQKDRCYFDIMFDVPP  203 (206)
Q Consensus       187 p~~~~~C~~~i~~P~~~  203 (206)
                      |.. ++||+.|+||++-
T Consensus       229 p~~-~~C~~~~~~~~~g  244 (245)
T 2pqx_A          229 PHP-GNCGKTFVIDKAG  244 (245)
T ss_dssp             SCC-BSCCSEEECCCSC
T ss_pred             CCC-CCCCCCeEeCCCC
Confidence            964 3499999999863

>3d3z_A Actibind; RNAse, hydrolase; HET: NAG D3Z; 1.70A {Aspergillus niger}

Probab=100.00  E-value=2.6e-47  Score=322.67  Aligned_cols=174  Identities=23%  Similarity=0.480  Sum_probs=144.1

Q ss_pred             CCCCCccEEEEEEecccccccCCCCCCCCCCcEEeeeecccc-------------C------------CCcchhhhcccC
Q 042583           18 CDSSGFDHFWLVQVWPSGYCLQANCSQTSDRFIIHGLWAVNV-------------V------------DKTLPDLMRYWL   72 (206)
Q Consensus        18 ~~~~~fD~~~l~l~W~p~~C~~~~C~~p~~~ftIHGLWP~~~-------------~------------~~l~~~L~~~Wp   72 (206)
                      +....-+.++++|.|+..     +|..|..+||||||||++.             .            ++++++|+++||
T Consensus        22 c~~~p~g~l~~tq~W~~~-----p~~~p~~~fTIHGLWP~~~~g~~p~~C~~s~~~~~i~~~l~~~~~~~ll~~L~~~Wp   96 (247)
T 3d3z_A           22 CFNSPGGSLLQTQFWDYD-----PSDGPSDSWTIHGLWPDNCDGTYQEYCDESREYSNITSILEAQNRTELLSYMKEYWP   96 (247)
T ss_dssp             TBCCSCCEEEEEEECCBT-----TBCSCTTCCEEEEEEEECTTSCBCCCCCGGGCCSCHHHHHHHTTCHHHHHHHHHHSC
T ss_pred             cccCCCCEEEEEeecCCC-----CCCCCccccEEeeeeccCCCCCCCCCCCCcccccchhhhhhhcchHHHHHHHHhhCc
Confidence            333445999999999975     4566789999999999874             1            123557999999


Q ss_pred             cCcCCCchhhHhHHhhhccceeecccCC-----------CCHHHHHHHHHHHHHhCChHHHHhhCCCCCCCCCCCcccHH
Q 042583           73 PLNENNLSRAENFWIYQWKKHGSAAKEF-----------IQPRDYFQMALQLAKDTDLRNTLQNHGAVPILPDGGSYNKR  141 (206)
Q Consensus        73 ~l~~~~~~~~~~fW~hEW~KHGtCs~~~-----------~~~~~YF~~al~l~~~~~i~~~L~~~gI~Ps~~~~~~y~~~  141 (206)
                      ++.... ++. .||+|||+|||||++.+           .++.+||++|++|++++|+.++|+++||+|+  .+++|+++
T Consensus        97 ~l~~~~-~~~-~fW~hEW~KHGTC~~~~~~~C~~~y~~~~~~~~YF~~al~L~~k~n~~~~L~~~gI~P~--~~~tyt~~  172 (247)
T 3d3z_A           97 DYEGAD-EDE-SFWEHEWNKHGTCINTIEPSCYTDYYAQEEVGDFFQQVVDLFKTLDSYTALSDAGITPS--EDATYKLS  172 (247)
T ss_dssp             CTTCGG-GHH-HHHHHHHHHTGGGCGGGSGGGBSSCCTTHHHHHHHHHHHHHHTTCCHHHHHHHTTCCCC--SSCCBCHH
T ss_pred             cccCCC-Ccc-HHHHHhhhcCeeecccCCcccccccccccCHHHHHHHHHHHHHhcCcHHHHHHCCccCC--CCceECHH
Confidence            997521 223 89999999999998753           3678999999999999999999999999997  56789999


Q ss_pred             HHHHHHHHhh-CCCceEEeeeCCCCCCcEEEEEEEEecCCC----ceecCCCCCC-CCCCc-eEecCCCCC
Q 042583          142 DYKAAIKNKT-GHDPLLKCVKGDDGISHLKEVIICVDDQAQ----SFIQCAKQKD-RCYFD-IMFDVPPRT  205 (206)
Q Consensus       142 ~i~~ai~~~~-g~~p~l~C~~~~~~~~~L~Ev~iC~~~~~~----~~i~Cp~~~~-~C~~~-i~~P~~~~~  205 (206)
                      +|++||++++ |..|.|+|.+     ++|.||+||||+++.    .+++|+.... .||.+ |+||++...
T Consensus       173 ~I~~Ai~~~~~g~~p~l~C~~-----~~L~Ev~iC~~~~~~~~~~~~~~~~~~~~~~C~~~~I~~pp~~~~  238 (247)
T 3d3z_A          173 DIEDALAAIHDGYPPYVGCED-----GALSQLYYYFNVKGSAIGGTYVASERLEDSNCKDSGIKYPPKYSS  238 (247)
T ss_dssp             HHHHHHHTTTTTCCCEEEEET-----TEEEEEEEEEEEESCTTTSEEEECCCSSCBSSCSSCBBCCCTTCC
T ss_pred             HHHHHHHHhcCCCCeEEEeCC-----CEEEEEEEEEecCCCccCCceeECCCCCCCCCCCCceEeCCCCCC
Confidence            9999999999 9999999974     799999999999873    4788887543 39985 999998643

>4dvk_A E(RNS) glycoprotein; T2 ribonuclease, virus envelope glycoprotein, viral protein; HET: NAG BMA MAN; 2.21A {Bovine viral diarrhea virus} PDB: 4dw5_A* 4dvl_A* 4dvn_A* 4dw3_A* 4dw4_A* 4dwc_A* 4dwa_A* 4dw7_A*

Probab=99.81  E-value=8.4e-21  Score=149.10  Aligned_cols=59  Identities=12%  Similarity=0.249  Sum_probs=50.0

Q ss_pred             CCCcEEeeeecccc----------------CCCcchhhhcccCcCcCCCchhhHhHHhhhccceeecccCCCCHHHHHHH
Q 042583           46 SDRFIIHGLWAVNV----------------VDKTLPDLMRYWLPLNENNLSRAENFWIYQWKKHGSAAKEFIQPRDYFQM  109 (206)
Q Consensus        46 ~~~ftIHGLWP~~~----------------~~~l~~~L~~~Wp~l~~~~~~~~~~fW~hEW~KHGtCs~~~~~~~~YF~~  109 (206)
                      ...||||||||++.                +++++++|++  |+|...      .||+|||+|||||+.  ++|.+||..
T Consensus        24 ~~~FTIHGLWPdN~~gt~PsnC~~~fd~~~I~dLl~~Ldk--PdL~~~------~FWeHEWnKHGTCS~--ynQe~YFdL   93 (165)
T 4dvk_A           24 GVNRSLHGIWPEKICTGVPSHLATDTELKAIHGMMDASEK--TNYTCC------RLQRHEWNKHGWCNW--YNIEPWILL   93 (165)
T ss_dssp             TCCEEEEEEECSCCCCSCCSSCCCHHHHHTSTTCCCSCGG--GTSCSS------HHHHHHHHHHTHHHH--SSHHHHHHH
T ss_pred             CCceEEEeeeCCCCCCCCccccCcccchhhHHHHHHhhcC--CCCCch------HHHHHHHHcCCccCC--CCHHHHHHH
Confidence            67899999999983                4567788887  888643      699999999999998  999999998


Q ss_pred             HHHHH
Q 042583          110 ALQLA  114 (206)
Q Consensus       110 al~l~  114 (206)
                      +-+.-
T Consensus        94 ~~~a~   98 (165)
T 4dvk_A           94 MNKTQ   98 (165)
T ss_dssp             HHHHH
T ss_pred             HHHHh
Confidence            87654

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	206
d1iooa_	196	d.124.1.1 (A:) Gemetophytic self-incompatibility a	9e-38
d1ucda_	190	d.124.1.1 (A:) Ribonuclease MC1 {Bitter gourd (Mom	8e-36
d1iyba_	208	d.124.1.1 (A:) RNase NW {Nicotiana glutinosa [TaxI	2e-34
d1iqqa_	200	d.124.1.1 (A:) S3-RNase {Japanese pear (Pyrus pyri	1e-29
d1sgla_	206	d.124.1.1 (A:) Trichomaglin {Gourd (Trichosanthes	2e-28
d1jy5a_	207	d.124.1.1 (A:) RNase-related protein {Hedge bindwe	2e-27
d1bola_	222	d.124.1.1 (A:) Ribonuclease Rh {Rhizopus niveus [T	6e-20

>d1iooa_ d.124.1.1 (A:) Gemetophytic self-incompatibility associated SF11-RNase {Winged tobacco (Nicotiana alata) [TaxId: 4087]} Length = 196

class: Alpha and beta proteins (a+b)
fold: Ribonuclease Rh-like
superfamily: Ribonuclease Rh-like
family: Ribonuclease Rh-like
domain: Gemetophytic self-incompatibility associated SF11-RNase
species: Winged tobacco (Nicotiana alata) [TaxId: 4087]

 Score =  127 bits (320), Expect = 9e-38
 Identities = 57/197 (28%), Positives = 85/197 (43%), Gaps = 24/197 (12%)

Query: 23  FDHFWLVQVWPSGYCLQANCSQTSDR-FIIHGLW----------------AVNVVDKTLP 65
           F++  LV  WP+ +C   +C + +   F IHGLW                      K L 
Sbjct: 2   FEYLQLVLTWPASFCYANHCERIAPNNFTIHGLWPDNVKTRLHNCKPKPTYSYFTGKMLN 61

Query: 66  DLMRYW--LPLNENNLSRAENFWIYQWKKHGSAAKEFIQPRDYFQMALQLAKDTDLRNTL 123
           DL ++W  L   ++     +  W YQ+ KHGS  ++      YF +AL+L    DL  TL
Sbjct: 62  DLDKHWMQLKFEQDYGRTEQPSWKYQYIKHGSCCQKRYNQNTYFGLALRLKDKFDLLRTL 121

Query: 124 QNHGAVPILPDGGSYNKRDYKAAIKNKTGHDPLLKCVKGDDGISHLKEVIICVDDQAQSF 183
           Q H  +P    G SY  +D   AIK  +  +P +KC +   G   L E+ IC    A S 
Sbjct: 122 QTHRIIP----GSSYTFQDIFDAIKTVSQENPDIKCAEVTKGTPELYEIGICFTPNADSM 177

Query: 184 IQCAKQKD-RCYFDIMF 199
            +C +         ++F
Sbjct: 178 FRCPQSDTCDKTAKVLF 194

>d1ucda_ d.124.1.1 (A:) Ribonuclease MC1 {Bitter gourd (Momordica charantia) [TaxId: 3673]} Length = 190

class: Alpha and beta proteins (a+b)
fold: Ribonuclease Rh-like
superfamily: Ribonuclease Rh-like
family: Ribonuclease Rh-like
domain: Ribonuclease MC1
species: Bitter gourd (Momordica charantia) [TaxId: 3673]

 Score =  122 bits (307), Expect = 8e-36
 Identities = 47/198 (23%), Positives = 79/198 (39%), Gaps = 29/198 (14%)

Query: 23  FDHFWLVQVWPSGYCLQANCSQTSDR----FIIHGLW----------------AVNVVDK 62
           FD FW VQ WP   C               F IHGLW                 +  +  
Sbjct: 1   FDSFWFVQQWPPAVCSFQKSGSCPGSGLRTFTIHGLWPQQSGTSLTNCPGSPFDITKISH 60

Query: 63  TLPDLMRYWLPLNENNLSRAENFWIYQWKKHGSAAKEFIQPRDYFQMALQLAKDTDLRNT 122
               L   W  +     +  + FW ++W KHG+ ++       YF++A+ +  + D+   
Sbjct: 61  LQSQLNTLWPNVLR---ANNQQFWSHEWTKHGTCSESTFNQAAYFKLAVDMRNNYDIIGA 117

Query: 123 LQNHGAVPILPDGGSYNKRDYKAAIKNKTGHDPLLKCVKG-DDGISHLKEVIICVDDQAQ 181
           L+ H      P+G + +++  K  +K K G  P L+C       +S+L +V+ C      
Sbjct: 118 LRPHA---AGPNGRTKSRQAIKGFLKAKFGKFPGLRCRTDPQTKVSYLVQVVACFAQDGS 174

Query: 182 SFIQCAKQKDRCYFDIMF 199
           + I C   +D C  + +F
Sbjct: 175 TLIDC--TRDTCGANFIF 190

>d1iyba_ d.124.1.1 (A:) RNase NW {Nicotiana glutinosa [TaxId: 35889]} Length = 208

class: Alpha and beta proteins (a+b)
fold: Ribonuclease Rh-like
superfamily: Ribonuclease Rh-like
family: Ribonuclease Rh-like
domain: RNase NW
species: Nicotiana glutinosa [TaxId: 35889]

 Score =  119 bits (299), Expect = 2e-34
 Identities = 60/206 (29%), Positives = 86/206 (41%), Gaps = 31/206 (15%)

Query: 23  FDHFWLVQVWPSGYCLQANCS------QTSDRFIIHGLWAVN------------------ 58
           FD F+ VQ WP  YC            + +  F IHGLW  N                  
Sbjct: 8   FDFFYFVQQWPGSYCDTKQSCCYPKTGKPASDFGIHGLWPNNNDGSYPSNCDSNSPYDQS 67

Query: 59  VVDKTLPDLMRYWLPLNENNLSRAENFWIYQWKKHGSAAKEFIQPRDYFQMALQLAKDTD 118
            V   +  + + W P           FW ++W+KHG+ A+       YF+ AL L    +
Sbjct: 68  QVSDLISRMQQNW-PTLACPSGTGSAFWSHEWEKHGTCAENVFDQHGYFKKALDLKNQIN 126

Query: 119 LRNTLQNHGAVPILPDGGSYNKRDYKAAIKNKTGHDPLLKCVKGDDGISHLKEVIICVDD 178
           L   LQ  G   I PDGG Y+    K AI++  G+ P ++C   + G S L ++ ICVD 
Sbjct: 127 LLEILQGAG---IHPDGGFYSLNSIKNAIRSAIGYAPGIECNVDESGNSQLYQIYICVDG 183

Query: 179 QAQSFIQC-AKQKDRCYFDIMFDVPP 203
              + I+C    + +C   I F  P 
Sbjct: 184 SGSNLIECPIFPRGKCGSSIEF--PT 207

>d1iqqa_ d.124.1.1 (A:) S3-RNase {Japanese pear (Pyrus pyrifolia) [TaxId: 3767]} Length = 200

class: Alpha and beta proteins (a+b)
fold: Ribonuclease Rh-like
superfamily: Ribonuclease Rh-like
family: Ribonuclease Rh-like
domain: S3-RNase
species: Japanese pear (Pyrus pyrifolia) [TaxId: 3767]

 Score =  107 bits (267), Expect = 1e-29
 Identities = 45/187 (24%), Positives = 68/187 (36%), Gaps = 29/187 (15%)

Query: 23  FDHFWLVQVWPSGYCLQAN--CSQTSDR-FIIHGLWAVN----------------VVDKT 63
           +D+F   Q +    C      C    D+ F +HGLW  N                     
Sbjct: 1   YDYFQFTQQYQLAVCNSNRTLCKDPPDKLFTVHGLWPSNMVGPDPSKCPIKNIRKREKLL 60

Query: 64  LPDLMRYWLPLNENNLSRAENFWIYQWKKHGS-AAKEFIQPRDYFQMALQL--AKDTDLR 120
              L   W  + +   ++   FW  +W KHGS           YF+  +++  +K  ++ 
Sbjct: 61  EHQLEIIWPNVFDR--TKNNLFWDKEWMKHGSCGYPTIDNENHYFETVIKMYISKKQNVS 118

Query: 121 NTLQNHGAVPILPDGGSYNKRDYKAAIKNK-TGHDPLLKCVKGDDGISHLKEVIICVDDQ 179
             L       I PDG      D + AI+N      P LKC K     + L E+ +C D  
Sbjct: 119 RILSKAK---IEPDGKKRALLDIENAIRNGADNKKPKLKCQK-KGTTTELVEITLCSDKS 174

Query: 180 AQSFIQC 186
            + FI C
Sbjct: 175 GEHFIDC 181

>d1sgla_ d.124.1.1 (A:) Trichomaglin {Gourd (Trichosanthes lepiniana) [TaxId: 282652]} Length = 206

class: Alpha and beta proteins (a+b)
fold: Ribonuclease Rh-like
superfamily: Ribonuclease Rh-like
family: Ribonuclease Rh-like
domain: Trichomaglin
species: Gourd (Trichosanthes lepiniana) [TaxId: 282652]

 Score =  104 bits (259), Expect = 2e-28
 Identities = 43/213 (20%), Positives = 76/213 (35%), Gaps = 39/213 (18%)

Query: 23  FDHFWLVQVWPSGYCLQANCSQTS---------DRFIIHGLWAVN--------------- 58
           FD+F L   W    C                   +F IHGL                   
Sbjct: 2   FDYFILALQWAGTSCRSGGACCPYNGCCKADSPTQFTIHGLRPEYSGGERPSCCTGGSFD 61

Query: 59  --VVDKTLPDLMRYW----LPLNENNLSRAENFWIYQWKKHGS-AAKEFIQPRDYFQMAL 111
              +      L+ YW      L ++  +R E  W  Q++KHG+ A+       +YF+  L
Sbjct: 62  PDEIMPFFGKLVEYWPTYRCALEQSCNNRKEILWGQQYEKHGTCASPVIKGEWNYFKKTL 121

Query: 112 QLAKDTDLRNTLQNHGAVPILPDGGSYNKRDYKAAIKNKTGHDPLLKCVKGDDGISHLKE 171
           +L    ++   L++ G V    +   Y+ +D   A+++  G  P L+C +       +++
Sbjct: 122 KLFMKYNVDKALEDAGIVA--SNSKMYDLKDIVVAVESAVGARPKLRCDEE----GLVQK 175

Query: 172 VIICVDDQAQSFIQCAKQKDRCYFDIMFDVPPR 204
           + +C D   +    C  Q   C   +     P 
Sbjct: 176 LSLCFDKDFK-PRDC-VQVGSCPRYVSLPEIPD 206

>d1jy5a_ d.124.1.1 (A:) RNase-related protein {Hedge bindweed (Calystegia sepium) [TaxId: 47519]} Length = 207

class: Alpha and beta proteins (a+b)
fold: Ribonuclease Rh-like
superfamily: Ribonuclease Rh-like
family: Ribonuclease Rh-like
domain: RNase-related protein
species: Hedge bindweed (Calystegia sepium) [TaxId: 47519]

 Score =  101 bits (251), Expect = 2e-27
 Identities = 45/213 (21%), Positives = 71/213 (33%), Gaps = 41/213 (19%)

Query: 23  FDHFWLVQVWPSGYCLQANCS---------QTSDRFIIHGLWAV---------------- 57
           FD+F L   W    CL    S         +    F I GLW                  
Sbjct: 4   FDYFTLALTWSGTECLSVKDSCPTNACSRSEVETGFTIKGLWPDYDDGTWPSCCEGAKYD 63

Query: 58  -NVVDKTLPDLMRYWLPL----NENNLSRAENFWIYQWKKHGS-AAKEFIQPRDYFQMAL 111
            N +     DL +YW       +    S   +   Y+W KHG+ ++       +YF   L
Sbjct: 64  QNEISILSNDLSKYWPSYSCPSSSACGSFDASDLAYEWAKHGTCSSPVLGNQYEYFSTTL 123

Query: 112 QLAKDTDLRNTLQNHGAVPILPDGGSYNKRDYKAAIKNKTGHDPLLKCVKGDDGISHLKE 171
            L    ++   L   G +P   +   Y      +AI++     P++KC         +++
Sbjct: 124 MLYFKYNISEILSESGYLP--SNTAEYKVEGIMSAIQSALRVTPVVKCKSD-----AVEQ 176

Query: 172 VIICVDDQAQSFIQCAKQKDRCYFDIMFDVPPR 204
           V IC D   Q   +C      C   +    P +
Sbjct: 177 VQICFDKTLQ-LQECPSTASTCPSLVSL--PIK 206

>d1bola_ d.124.1.1 (A:) Ribonuclease Rh {Rhizopus niveus [TaxId: 4844]} Length = 222

class: Alpha and beta proteins (a+b)
fold: Ribonuclease Rh-like
superfamily: Ribonuclease Rh-like
family: Ribonuclease Rh-like
domain: Ribonuclease Rh
species: Rhizopus niveus [TaxId: 4844]

 Score = 81.8 bits (201), Expect = 6e-20
 Identities = 43/223 (19%), Positives = 74/223 (33%), Gaps = 53/223 (23%)

Query: 17  TCDSSGFDHFWLVQVWPSGYCLQANCSQTSDRFIIHGLWAVN------------------ 58
           TC S  +    L   W  GY          + F +HGLW                     
Sbjct: 18  TCCSPEYGLVVLNMQWAPGYG-------PDNAFTLHGLWPDKCSGAYAPSGGCDSNRASS 70

Query: 59  ----VVDKTLPDLMRYWLPLNENNLSRAENFWIYQWKKHGSAAKEFIQ-----------P 103
               V+      L    L    +N      FW ++W KHG+    +              
Sbjct: 71  SIASVIKSKDSSLYNSMLTYWPSNQGNNNVFWSHEWSKHGTCVSTYDPDCYDNYEEGEDI 130

Query: 104 RDYFQMALQLAKDTDLRNTLQNHGAVPILPDGGSYNKRDYKAAIKNKTGHDPLLKCVKGD 163
            DYFQ A+ L    ++     ++G  P    GG+Y   + ++AI++  G    + C  G 
Sbjct: 131 VDYFQKAMDLRSQYNVYKAFSSNGITP----GGTYTATEMQSAIESYFGAKAKIDCSSG- 185

Query: 164 DGISHLKEVIICVDDQAQ-SFIQCAK-QKDRCYFDIMFDVPPR 204
                L +V +    + + +++         C  D+ +  P +
Sbjct: 186 ----TLSDVALYFYVRGRDTYVITDALSTGSCSGDVEY--PTK 222

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	206
d1iyba_	208	RNase NW {Nicotiana glutinosa [TaxId: 35889]}	100.0
d1iooa_	196	Gemetophytic self-incompatibility associated SF11-	100.0
d1ucda_	190	Ribonuclease MC1 {Bitter gourd (Momordica charanti	100.0
d1sgla_	206	Trichomaglin {Gourd (Trichosanthes lepiniana) [Tax	100.0
d1jy5a_	207	RNase-related protein {Hedge bindweed (Calystegia	100.0
d1iqqa_	200	S3-RNase {Japanese pear (Pyrus pyrifolia) [TaxId:	100.0
d1bola_	222	Ribonuclease Rh {Rhizopus niveus [TaxId: 4844]}	100.0
d2ciwa1	120	Cloroperoxidase {Fungus (Caldariomyces fumago) [Ta	89.98

>d1iyba_ d.124.1.1 (A:) RNase NW {Nicotiana glutinosa [TaxId: 35889]}

class: Alpha and beta proteins (a+b)
fold: Ribonuclease Rh-like
superfamily: Ribonuclease Rh-like
family: Ribonuclease Rh-like
domain: RNase NW
species: Nicotiana glutinosa [TaxId: 35889]

Probab=100.00  E-value=2e-59  Score=385.65  Aligned_cols=181  Identities=33%  Similarity=0.649  Sum_probs=161.3

Q ss_pred             CCCCCccEEEEEEecccccccCCC-CCC-----CCCCcEEeeeecccc------------------CCCcchhhhcccCc
Q 042583           18 CDSSGFDHFWLVQVWPSGYCLQAN-CSQ-----TSDRFIIHGLWAVNV------------------VDKTLPDLMRYWLP   73 (206)
Q Consensus        18 ~~~~~fD~~~l~l~W~p~~C~~~~-C~~-----p~~~ftIHGLWP~~~------------------~~~l~~~L~~~Wp~   73 (206)
                      ..+++||||+|||+|||+||..++ |..     +..+||||||||++.                  +++++++|+.+||+
T Consensus         3 ~~~~~fDy~~l~~~Wpp~~C~~~~~~~~~~~~~~~~~ftIHGLWP~~~~g~~p~~C~~~~~~~~~~~~~l~~~l~~~Wp~   82 (208)
T d1iyba_           3 EFAQDFDFFYFVQQWPGSYCDTKQSCCYPKTGKPASDFGIHGLWPNNNDGSYPSNCDSNSPYDQSQVSDLISRMQQNWPT   82 (208)
T ss_dssp             CCCCSCSEEEEEEECHHHHSSSSSCCCCCTTCSCCSSCEEEEEEEECTTSCCCBSCCTTSCCCGGGGGGGHHHHHHHSCC
T ss_pred             cccCCCCeEEEEEECCHHHhCCCCCCCCCCCCCCCCCeEEeCCCCCCCCCCCccccCCCcCccccccHHHHHHHHHHHHH
Confidence            357899999999999999998765 322     267899999999864                  45678899999999


Q ss_pred             CcCCCchhhHhHHhhhccceeecccCCCCHHHHHHHHHHHHHhCChHHHHhhCCCCCCCCCCCcccHHHHHHHHHHhhCC
Q 042583           74 LNENNLSRAENFWIYQWKKHGSAAKEFIQPRDYFQMALQLAKDTDLRNTLQNHGAVPILPDGGSYNKRDYKAAIKNKTGH  153 (206)
Q Consensus        74 l~~~~~~~~~~fW~hEW~KHGtCs~~~~~~~~YF~~al~l~~~~~i~~~L~~~gI~Ps~~~~~~y~~~~i~~ai~~~~g~  153 (206)
                      +..+..++. .||+|||+|||||++++.++.+||++|++|++++|+.++|+++||+|   +++.|++++|++||++++|.
T Consensus        83 l~~~~~~~~-~~w~hEW~KHGtC~~~~~~~~~YF~~al~L~~~~n~~~~L~~~~i~p---~~~~y~~~~i~~al~~~~g~  158 (208)
T d1iyba_          83 LACPSGTGS-AFWSHEWEKHGTCAENVFDQHGYFKKALDLKNQINLLEILQGAGIHP---DGGFYSLNSIKNAIRSAIGY  158 (208)
T ss_dssp             CCSSCCCSH-HHHHHHHHHTGGGGTTTCCHHHHHHHHHHHHHHCCHHHHHHHTTCCS---SSCEEEHHHHHHHHHHHHSS
T ss_pred             hhcccCccH-HHHHHhcccceeccCccCCHHHHHHHHHHHHHHcccHHHHHhcccCC---CCceeeHHHHHHHHHHhhCC
Confidence            986554434 79999999999999988899999999999999999999999999999   48889999999999999999


Q ss_pred             CceEEeeeCCCCCCcEEEEEEEEecCCCceecCCCCCCC-CCCceEecCC
Q 042583          154 DPLLKCVKGDDGISHLKEVIICVDDQAQSFIQCAKQKDR-CYFDIMFDVP  202 (206)
Q Consensus       154 ~p~l~C~~~~~~~~~L~Ev~iC~~~~~~~~i~Cp~~~~~-C~~~i~~P~~  202 (206)
                      +|.|+|.++.+|+++|.||+||||+++..+|+||...++ ||++|+||+|
T Consensus       159 ~~~l~C~~~~~~~~~L~Ei~iC~~~~~~~~~~Cp~~~~~~C~~~i~~P~f  208 (208)
T d1iyba_         159 APGIECNVDESGNSQLYQIYICVDGSGSNLIECPIFPRGKCGSSIEFPTF  208 (208)
T ss_dssp             CCEEEEEECTTCCEEEEEEEEEEETTSSSBCCCSCCCCCCCCSEEECCCC
T ss_pred             CccEEEEEcCCCCEEEEEEEEEEeCCcCceeECCCCCCCCCCCceEcCCC
Confidence            999999998888889999999999997779999987655 9999999987

>d1iooa_ d.124.1.1 (A:) Gemetophytic self-incompatibility associated SF11-RNase {Winged tobacco (Nicotiana alata) [TaxId: 4087]}

class: Alpha and beta proteins (a+b)
fold: Ribonuclease Rh-like
superfamily: Ribonuclease Rh-like
family: Ribonuclease Rh-like
domain: Gemetophytic self-incompatibility associated SF11-RNase
species: Winged tobacco (Nicotiana alata) [TaxId: 4087]

Probab=100.00  E-value=5e-58  Score=374.25  Aligned_cols=173  Identities=35%  Similarity=0.679  Sum_probs=153.8

Q ss_pred             CccEEEEEEecccccccCCCCCCC-CCCcEEeeeecccc----------------CCCcchhhhcccCcCcCCCchh---
Q 042583           22 GFDHFWLVQVWPSGYCLQANCSQT-SDRFIIHGLWAVNV----------------VDKTLPDLMRYWLPLNENNLSR---   81 (206)
Q Consensus        22 ~fD~~~l~l~W~p~~C~~~~C~~p-~~~ftIHGLWP~~~----------------~~~l~~~L~~~Wp~l~~~~~~~---   81 (206)
                      +||||+|||+|||+||..++|..| ..+||||||||++.                ..+++++|..+||++..+...+   
T Consensus         1 dfDy~~l~~~Wpp~~C~~~~C~~~~~~~fTIHGLWP~~~~~~~~~C~~~~~~~~~~~~~~~~l~~~wp~l~~~~~~~~~~   80 (196)
T d1iooa_           1 DFEYLQLVLTWPASFCYANHCERIAPNNFTIHGLWPDNVKTRLHNCKPKPTYSYFTGKMLNDLDKHWMQLKFEQDYGRTE   80 (196)
T ss_dssp             CCSEEEEEEECHHHHHHHSCCSSCCCSSCEEEEEEEECSSSCCCSCSSCCCCCCCCHHHHHHHHHHTCCTTSCHHHHHHH
T ss_pred             CCcEEEEEEEcChHhhcCCCCCCCCCCCcEEeCCCCCCCCCCCccCCCCccceecchhhhhHHHHhhhhhccccccCCcc
Confidence            699999999999999998889886 67899999999865                2346778999999997653321   


Q ss_pred             hHhHHhhhccceeecccCCCCHHHHHHHHHHHHHhCChHHHHhhCCCCCCCCCCCcccHHHHHHHHHHhhCCCceEEeee
Q 042583           82 AENFWIYQWKKHGSAAKEFIQPRDYFQMALQLAKDTDLRNTLQNHGAVPILPDGGSYNKRDYKAAIKNKTGHDPLLKCVK  161 (206)
Q Consensus        82 ~~~fW~hEW~KHGtCs~~~~~~~~YF~~al~l~~~~~i~~~L~~~gI~Ps~~~~~~y~~~~i~~ai~~~~g~~p~l~C~~  161 (206)
                      . .||+|||+|||||++++++|.+||++|++|++++|+.++|+++||+|    +.+|++++|++||+.++|++|.|+|.+
T Consensus        81 ~-~fW~hEW~KHGTCa~~~~~~~~YF~~al~l~~~~ni~~~L~~~gI~P----~~ty~~~~I~~Ai~~~~g~~p~l~C~~  155 (196)
T d1iooa_          81 Q-PSWKYQYIKHGSCCQKRYNQNTYFGLALRLKDKFDLLRTLQTHRIIP----GSSYTFQDIFDAIKTVSQENPDIKCAE  155 (196)
T ss_dssp             C-HHHHHHHHHTGGGCTTTCCHHHHHHHHHHHHHTCCHHHHHHHTTCCT----TEEECHHHHHHHHHHHHSSCCEEEEEC
T ss_pred             c-hhHHhhhhhccccccccCCHHHHHHHHHHHHHHcCHHHHHHhCcccC----CCcCcHHHHHHHHHHHHCCCcEEEEee
Confidence            2 69999999999999988899999999999999999999999999999    567999999999999999999999998


Q ss_pred             CCCCCCcEEEEEEEEecCCCceecCCCCCCCCCC--ceEec
Q 042583          162 GDDGISHLKEVIICVDDQAQSFIQCAKQKDRCYF--DIMFD  200 (206)
Q Consensus       162 ~~~~~~~L~Ev~iC~~~~~~~~i~Cp~~~~~C~~--~i~~P  200 (206)
                      +.+|+.+|.||+||||++++.+||||...+ |+.  .|+|.
T Consensus       156 ~~~g~~~L~Ei~iC~~k~~~~~idCp~~~~-C~~~~~i~f~  195 (196)
T d1iooa_         156 VTKGTPELYEIGICFTPNADSMFRCPQSDT-CDKTAKVLFR  195 (196)
T ss_dssp             SSTTCCEEEEEEEEECTTSSSEECCCCCCC-SCTTSCEEEC
T ss_pred             CCCCCeEEEEEEEEEECCCCeeeCCCCCCC-CCCCCCeeee
Confidence            877888999999999999987899998765 664  78885

>d1ucda_ d.124.1.1 (A:) Ribonuclease MC1 {Bitter gourd (Momordica charantia) [TaxId: 3673]}

class: Alpha and beta proteins (a+b)
fold: Ribonuclease Rh-like
superfamily: Ribonuclease Rh-like
family: Ribonuclease Rh-like
domain: Ribonuclease MC1
species: Bitter gourd (Momordica charantia) [TaxId: 3673]

Probab=100.00  E-value=3.7e-57  Score=367.45  Aligned_cols=169  Identities=30%  Similarity=0.680  Sum_probs=150.3

Q ss_pred             ccEEEEEEecccccccCCC---CCCC-CCCcEEeeeecccc----------------CCCcchhhhcccCcCcCCCchhh
Q 042583           23 FDHFWLVQVWPSGYCLQAN---CSQT-SDRFIIHGLWAVNV----------------VDKTLPDLMRYWLPLNENNLSRA   82 (206)
Q Consensus        23 fD~~~l~l~W~p~~C~~~~---C~~p-~~~ftIHGLWP~~~----------------~~~l~~~L~~~Wp~l~~~~~~~~   82 (206)
                      ||||+|||+|||+||..++   |..+ ..+||||||||++.                ++++.++|+.+||++...+.  .
T Consensus         1 fDy~~l~~~Wpps~C~~~~~~~c~~~~~~~ftIHGLWP~~~~~~p~~C~~~~~d~~~~~~l~~~L~~~wp~l~~~~~--~   78 (190)
T d1ucda_           1 FDSFWFVQQWPPAVCSFQKSGSCPGSGLRTFTIHGLWPQQSGTSLTNCPGSPFDITKISHLQSQLNTLWPNVLRANN--Q   78 (190)
T ss_dssp             CCEEEEEEECHHHHHHTCCSSCCGGGGCCSCEEEEEEEEETTEECCSCSCCCCCGGGGGGGHHHHHHHSCCSSSSCH--H
T ss_pred             CCEEEEEEECChHHhcCCCCCCCCCCCCCCeEEeCCCCCCCCCCcccCCCcccccccchhHHHHHHHHhhhhccccC--h
Confidence            8999999999999998664   5554 67899999999975                46678899999999976543  3


Q ss_pred             HhHHhhhccceeecccCCCCHHHHHHHHHHHHHhCChHHHHhhCCCCCCCCCCCcccHHHHHHHHHHhhCCCceEEeeeC
Q 042583           83 ENFWIYQWKKHGSAAKEFIQPRDYFQMALQLAKDTDLRNTLQNHGAVPILPDGGSYNKRDYKAAIKNKTGHDPLLKCVKG  162 (206)
Q Consensus        83 ~~fW~hEW~KHGtCs~~~~~~~~YF~~al~l~~~~~i~~~L~~~gI~Ps~~~~~~y~~~~i~~ai~~~~g~~p~l~C~~~  162 (206)
                       .||+|||+|||||+.++++|.+||++|++|++++|+.++|+++||+|+   ++.|++++|++||++++|++|.|+|.++
T Consensus        79 -~~w~hEW~KHGtC~~~~~~~~~YF~~al~l~~~~n~~~~L~~~gI~P~---~~~y~~~~I~~al~~~~g~~p~l~C~~~  154 (190)
T d1ucda_          79 -QFWSHEWTKHGTCSESTFNQAAYFKLAVDMRNNYDIIGALRPHAAGPN---GRTKSRQAIKGFLKAKFGKFPGLRCRTD  154 (190)
T ss_dssp             -HHHHHHHHHTGGGGTTTCCHHHHHHHHHHHHHTCCHHHHHGGGTCSCS---SSEEEHHHHHHHHHHHHSSCCEEEEEEC
T ss_pred             -HHHHHHHHhCcccccccCCHHHHHHHHHHHHHhCCHHHHHHHcCCCCC---cccccHHHHHHHHHHhhCCCceEEEEEC
Confidence             899999999999997778999999999999999999999999999994   8899999999999999999999999887


Q ss_pred             CCC-CCcEEEEEEEEecCCCceecCCCCCCCCCCceEe
Q 042583          163 DDG-ISHLKEVIICVDDQAQSFIQCAKQKDRCYFDIMF  199 (206)
Q Consensus       163 ~~~-~~~L~Ev~iC~~~~~~~~i~Cp~~~~~C~~~i~~  199 (206)
                      ..+ ..+|.||+||||++++.+||||.  +.||++|+|
T Consensus       155 ~~~~~~~L~Ev~iC~~k~~~~~idCp~--~~C~~~~~f  190 (190)
T d1ucda_         155 PQTKVSYLVQVVACFAQDGSTLIDCTR--DTCGANFIF  190 (190)
T ss_dssp             TTTCCEEEEEEEEEEETTSSSEECCCC--CCCCSEEEC
T ss_pred             CCCCcEEEEEEEEEECCCCCccccCCC--CCCCCCcCC
Confidence            543 35899999999999977999994  349999987

>d1sgla_ d.124.1.1 (A:) Trichomaglin {Gourd (Trichosanthes lepiniana) [TaxId: 282652]}

class: Alpha and beta proteins (a+b)
fold: Ribonuclease Rh-like
superfamily: Ribonuclease Rh-like
family: Ribonuclease Rh-like
domain: Trichomaglin
species: Gourd (Trichosanthes lepiniana) [TaxId: 282652]

Probab=100.00  E-value=1.4e-56  Score=368.15  Aligned_cols=174  Identities=24%  Similarity=0.483  Sum_probs=151.2

Q ss_pred             CccEEEEEEecccccccCCC-------CCCC--CCCcEEeeeecccc-----------------CCCcchhhhcccCcCc
Q 042583           22 GFDHFWLVQVWPSGYCLQAN-------CSQT--SDRFIIHGLWAVNV-----------------VDKTLPDLMRYWLPLN   75 (206)
Q Consensus        22 ~fD~~~l~l~W~p~~C~~~~-------C~~p--~~~ftIHGLWP~~~-----------------~~~l~~~L~~~Wp~l~   75 (206)
                      +||||+|||+|||+||..++       |..+  ..+||||||||++.                 +.+++++|..+||++.
T Consensus         1 dfDy~~Lal~Wpps~C~~~~~~~~~~~~~~~~~~~~ftIHGLWP~~~~g~~p~~C~~~~~~~~~~~~l~~~l~~~wP~~~   80 (206)
T d1sgla_           1 EFDYFILALQWAGTSCRSGGACCPYNGCCKADSPTQFTIHGLRPEYSGGERPSCCTGGSFDPDEIMPFFGKLVEYWPTYR   80 (206)
T ss_dssp             CCSEEEEEEEEHHHHTSSCCCCCTTBTTCSSSCCCCEEEEEEEECCCSSCCCCCCSCCCCCGGGGGGGHHHHHHHSCBSC
T ss_pred             CCcEEEEEEECCHHHhccCCCCCCCCCCCCCCCCCceeEeccccccCCCCCCCCCCCccccccchhhHHHHHHhhhhhhh
Confidence            69999999999999998754       3332  57899999999865                 3567789999999987


Q ss_pred             CCCc-----hhhHhHHhhhccceeecccCCC-CHHHHHHHHHHHHHhCChHHHHhhCCCCCCCCCCCcccHHHHHHHHHH
Q 042583           76 ENNL-----SRAENFWIYQWKKHGSAAKEFI-QPRDYFQMALQLAKDTDLRNTLQNHGAVPILPDGGSYNKRDYKAAIKN  149 (206)
Q Consensus        76 ~~~~-----~~~~~fW~hEW~KHGtCs~~~~-~~~~YF~~al~l~~~~~i~~~L~~~gI~Ps~~~~~~y~~~~i~~ai~~  149 (206)
                      ....     +.. .||+|||+|||||++.++ ++.+||++|++|++++|+.++|+++||+|+  +++.|++++|++||++
T Consensus        81 ~~~~~~~~~~~~-~fw~hEW~KHGTC~~~~~~~~~~YF~~al~L~~~~~~~~~L~~~gI~P~--~~~~y~~~~i~~al~~  157 (206)
T d1sgla_          81 CALEQSCNNRKE-ILWGQQYEKHGTCASPVIKGEWNYFKKTLKLFMKYNVDKALEDAGIVAS--NSKMYDLKDIVVAVES  157 (206)
T ss_dssp             SSCEECGGGCEE-CHHHHHHHHTGGGGTTTSCSHHHHHHHHHHHHHHTCHHHHHHHHTCCCC--SSCEEEHHHHHHHHHH
T ss_pred             hhhhcccccccH-HHHHHHHHhcccccCcccccHHHHHHHHHHHHHhcCHHHHHHHCCCCCC--CCceeeHHHHHHHHHH
Confidence            4321     112 799999999999998654 799999999999999999999999999997  6778999999999999


Q ss_pred             hhCCCceEEeeeCCCCCCcEEEEEEEEecCCCceecCCCCCCCCCCceEecCCCC
Q 042583          150 KTGHDPLLKCVKGDDGISHLKEVIICVDDQAQSFIQCAKQKDRCYFDIMFDVPPR  204 (206)
Q Consensus       150 ~~g~~p~l~C~~~~~~~~~L~Ev~iC~~~~~~~~i~Cp~~~~~C~~~i~~P~~~~  204 (206)
                      ++|++|.|+|.+    +++|.||+||||++++ +||||...+ ||..|.||+.|.
T Consensus       158 ~~g~~~~l~C~~----~~~L~Ev~iC~d~~~~-~~~C~~~~~-Cp~~i~~P~~~~  206 (206)
T d1sgla_         158 AVGARPKLRCDE----EGLVQKLSLCFDKDFK-PRDCVQVGS-CPRYVSLPEIPD  206 (206)
T ss_dssp             HHSSCCEEEECT----TSBEEEEEEEEETTCC-EECCCCCCC-SCSEEECCCCCC
T ss_pred             HhCCCCEEEECC----CCeEEEEEEEECCCce-EeCCCCCCC-CCCCCcCCCCCC
Confidence            999999999975    3699999999999998 899997654 999999999984

>d1jy5a_ d.124.1.1 (A:) RNase-related protein {Hedge bindweed (Calystegia sepium) [TaxId: 47519]}

class: Alpha and beta proteins (a+b)
fold: Ribonuclease Rh-like
superfamily: Ribonuclease Rh-like
family: Ribonuclease Rh-like
domain: RNase-related protein
species: Hedge bindweed (Calystegia sepium) [TaxId: 47519]

Probab=100.00  E-value=5.1e-56  Score=364.79  Aligned_cols=173  Identities=26%  Similarity=0.537  Sum_probs=151.6

Q ss_pred             CCccEEEEEEecccccccCCC-------CCCC--CCCcEEeeeecccc-----------------CCCcchhhhcccCcC
Q 042583           21 SGFDHFWLVQVWPSGYCLQAN-------CSQT--SDRFIIHGLWAVNV-----------------VDKTLPDLMRYWLPL   74 (206)
Q Consensus        21 ~~fD~~~l~l~W~p~~C~~~~-------C~~p--~~~ftIHGLWP~~~-----------------~~~l~~~L~~~Wp~l   74 (206)
                      .+||||+|||+|||+||...+       |..+  ..+||||||||++.                 ++++.++|..+||++
T Consensus         2 ~~fDyy~Lal~Wpp~~C~~~~~~~~~~~C~~~~~~~~ftIHGLWP~~~~g~~p~~C~~~~~~~~~~~~l~~~l~~~wp~~   81 (207)
T d1jy5a_           2 KEFDYFTLALTWSGTECLSVKDSCPTNACSRSEVETGFTIKGLWPDYDDGTWPSCCEGAKYDQNEISILSNDLSKYWPSY   81 (207)
T ss_dssp             CCCCEEEEEEEEHHHHTCC----CTTBGGGCTTSCSCEEEEEEEEECTTSCCCCSCSSCCCCGGGGGGGHHHHHHHSCBC
T ss_pred             CcCcEEEEEEECChHHhccCCCCCCCCCCCCCCCCCCceEecccccCCCCCCCCCCCCCccccccchhhhhHHhhhcchh
Confidence            589999999999999997642       6654  67899999999875                 456788999999999


Q ss_pred             cCCCch-----hhHhHHhhhccceeecccCCC-CHHHHHHHHHHHHHhCChHHHHhhCCCCCCCCCCCcccHHHHHHHHH
Q 042583           75 NENNLS-----RAENFWIYQWKKHGSAAKEFI-QPRDYFQMALQLAKDTDLRNTLQNHGAVPILPDGGSYNKRDYKAAIK  148 (206)
Q Consensus        75 ~~~~~~-----~~~~fW~hEW~KHGtCs~~~~-~~~~YF~~al~l~~~~~i~~~L~~~gI~Ps~~~~~~y~~~~i~~ai~  148 (206)
                      ......     +. .||+|||+|||||++.++ ++.+||++|++|++++|+.++|+++||+|+  +...|++++|.+||+
T Consensus        82 ~~~~~~~~~~~~~-~~w~hEW~KHGTC~~~~~~~~~~YF~~al~l~~~~n~~~~L~~~~i~P~--~~~~y~~~~i~~a~~  158 (207)
T d1jy5a_          82 SCPSSSACGSFDA-SDLAYEWAKHGTCSSPVLGNQYEYFSTTLMLYFKYNISEILSESGYLPS--NTAEYKVEGIMSAIQ  158 (207)
T ss_dssp             CSSCEEETTEEES-SHHHHHHHHTGGGGTTTSCSHHHHHHHHHHHHHHSCHHHHHHTTTCCCC--SSCCEEHHHHHHHHH
T ss_pred             hhhhhhhhcCCCc-hHHHHHhhhCccccCCCcCCHHHHHHHHHHHHHhcChHHHHHHcCCCCC--CcccccHHHHHHHHH
Confidence            755331     12 799999999999998654 899999999999999999999999999997  567899999999999


Q ss_pred             HhhCCCceEEeeeCCCCCCcEEEEEEEEecCCCceecCCCCCCCCCCceEecCC
Q 042583          149 NKTGHDPLLKCVKGDDGISHLKEVIICVDDQAQSFIQCAKQKDRCYFDIMFDVP  202 (206)
Q Consensus       149 ~~~g~~p~l~C~~~~~~~~~L~Ev~iC~~~~~~~~i~Cp~~~~~C~~~i~~P~~  202 (206)
                      +++|.+|.|+|.+     ++|.||+||||++++ +||||...+.||+.|+||+.
T Consensus       159 ~~~g~~~~l~C~~-----~~L~Ei~iC~~~~~~-~~~Cp~~~~~Cp~~i~~P~k  206 (207)
T d1jy5a_         159 SALRVTPVVKCKS-----DAVEQVQICFDKTLQ-LQECPSTASTCPSLVSLPIK  206 (207)
T ss_dssp             HHHSSCCEEEEET-----TEEEEEEEEECTTSC-EECCCCCCCCSCSEEBCCCC
T ss_pred             HhcCCCcEEEeCC-----CcEEEEEEEECCCCc-EEcCCCCCCCCCCceEcCCC
Confidence            9999999999976     689999999999997 89999876679999999874

>d1iqqa_ d.124.1.1 (A:) S3-RNase {Japanese pear (Pyrus pyrifolia) [TaxId: 3767]}

class: Alpha and beta proteins (a+b)
fold: Ribonuclease Rh-like
superfamily: Ribonuclease Rh-like
family: Ribonuclease Rh-like
domain: S3-RNase
species: Japanese pear (Pyrus pyrifolia) [TaxId: 3767]

Probab=100.00  E-value=3.3e-54  Score=352.56  Aligned_cols=171  Identities=26%  Similarity=0.517  Sum_probs=146.1

Q ss_pred             ccEEEEEEecccccccCCC--CCCC-CCCcEEeeeecccc----------------CCCcchhhhcccCcCcCCCchhhH
Q 042583           23 FDHFWLVQVWPSGYCLQAN--CSQT-SDRFIIHGLWAVNV----------------VDKTLPDLMRYWLPLNENNLSRAE   83 (206)
Q Consensus        23 fD~~~l~l~W~p~~C~~~~--C~~p-~~~ftIHGLWP~~~----------------~~~l~~~L~~~Wp~l~~~~~~~~~   83 (206)
                      ||||+|||+|||+||..++  |..| ...||||||||++.                .+.+.++|+.+||++.....+ . 
T Consensus         1 fDy~~l~~~Wpps~C~~~~~~C~~~~~~~fTIHGLWP~~~~g~~p~~C~~~~~~~~~~~l~~~l~~~Wp~~~~~~~~-~-   78 (200)
T d1iqqa_           1 YDYFQFTQQYQLAVCNSNRTLCKDPPDKLFTVHGLWPSNMVGPDPSKCPIKNIRKREKLLEHQLEIIWPNVFDRTKN-N-   78 (200)
T ss_dssp             CCEEEEEEEEHHHHTTSSSSCCSSCCCSSEEEEEEEEECSSSSCCCSCCCSCCCCCCHHHHHHHHHHSCCSSCGGGH-H-
T ss_pred             CceEEEEEECChHHhCCCCCCCCCCCCCCeEEEcccCCCCCCCCcccCCCccccchhhhhHHHHHHHhHhhccCCCc-c-
Confidence            8999999999999998765  8886 67899999999875                234678999999999754332 3 


Q ss_pred             hHHhhhccceeecccC-CCCHHHHHHHHHHHH--HhCChHHHHhhCCCCCCCCCCCcccHHHHHHHHHHh-hCCCceEEe
Q 042583           84 NFWIYQWKKHGSAAKE-FIQPRDYFQMALQLA--KDTDLRNTLQNHGAVPILPDGGSYNKRDYKAAIKNK-TGHDPLLKC  159 (206)
Q Consensus        84 ~fW~hEW~KHGtCs~~-~~~~~~YF~~al~l~--~~~~i~~~L~~~gI~Ps~~~~~~y~~~~i~~ai~~~-~g~~p~l~C  159 (206)
                      .||+|||+|||||+.+ +.+|.+||++|++|+  +++|+.++|+++||+|+   ++.|++++|++||+++ +|.+|.|+|
T Consensus        79 ~fw~hEW~KHGTC~~~~~~~~~~YF~~al~L~~~~~~n~~~~L~~~gI~P~---~~~~~~~~i~~ai~~~~~g~~p~l~C  155 (200)
T d1iqqa_          79 LFWDKEWMKHGSCGYPTIDNENHYFETVIKMYISKKQNVSRILSKAKIEPD---GKKRALLDIENAIRNGADNKKPKLKC  155 (200)
T ss_dssp             HHHHHHHHHTGGGSTTTSCSHHHHHHHHHHHHTTTCCCHHHHHHHTTCCSS---CCEECHHHHHHHHHTTTTTCCCEEEE
T ss_pred             hhhHHHHhhCccccCcCcCCHHHHHHHHHHHHHHhhCCHHHHHHHcCCCCC---CCeeeHHHHHHHHHHHhcCCCcEEEe
Confidence            7999999999999875 368999999999995  89999999999999994   8889999999999986 488999999


Q ss_pred             eeCCCCCCcEEEEEEEEecCCCceecCCCCC-----CCCCC-ceEe
Q 042583          160 VKGDDGISHLKEVIICVDDQAQSFIQCAKQK-----DRCYF-DIMF  199 (206)
Q Consensus       160 ~~~~~~~~~L~Ev~iC~~~~~~~~i~Cp~~~-----~~C~~-~i~~  199 (206)
                      .++. +.++|.||+||||+++..+||||...     ++||. .|.|
T Consensus       156 ~~~~-~~~~L~EI~iC~~~~~~~~~dCp~p~~~~~~~~CP~~~i~~  200 (200)
T d1iqqa_         156 QKKG-TTTELVEITLCSDKSGEHFIDCPHPFEPISPHYCPTNNIKY  200 (200)
T ss_dssp             EEET-TEEEEEEEEEEECTTSSSEECCSCCCCTTSTTCCCSSCEEC
T ss_pred             CCCC-CceEEEEEEEEEeCCCCccCCCCCCCCCCCCCCCCcCCCcC
Confidence            9864 44689999999999997799998642     23996 5765

>d1bola_ d.124.1.1 (A:) Ribonuclease Rh {Rhizopus niveus [TaxId: 4844]}

class: Alpha and beta proteins (a+b)
fold: Ribonuclease Rh-like
superfamily: Ribonuclease Rh-like
family: Ribonuclease Rh-like
domain: Ribonuclease Rh
species: Rhizopus niveus [TaxId: 4844]

Probab=100.00  E-value=1.3e-50  Score=336.03  Aligned_cols=164  Identities=24%  Similarity=0.520  Sum_probs=142.4

Q ss_pred             CCCCccEEEEEEecccccccCCCCCCCCCCcEEeeeecccc--------------------------CCCcchhhhcccC
Q 042583           19 DSSGFDHFWLVQVWPSGYCLQANCSQTSDRFIIHGLWAVNV--------------------------VDKTLPDLMRYWL   72 (206)
Q Consensus        19 ~~~~fD~~~l~l~W~p~~C~~~~C~~p~~~ftIHGLWP~~~--------------------------~~~l~~~L~~~Wp   72 (206)
                      ...+||+|+|+++|+|+||       |.++||||||||++.                          +.++.++|..+||
T Consensus        20 ~~~~~~~~~l~~~w~~~~~-------p~~~FtIHGLWP~~~~g~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~l~~~w~   92 (222)
T d1bola_          20 CSPEYGLVVLNMQWAPGYG-------PDNAFTLHGLWPDKCSGAYAPSGGCDSNRASSSIASVIKSKDSSLYNSMLTYWP   92 (222)
T ss_dssp             TSCSSCEEEEEEECCTTSS-------CTTCCEEEEEEEECTTSCBCCTTCSCSTTCCSCHHHHHHHHCHHHHHHHHHHSC
T ss_pred             cccCCCeEEEEEeCCCCCC-------CcccceecCCcCcCCCCCcCCccCCCcccccccccchhhhhhhhhhhHHHHhhh
Confidence            3558999999999999999       578999999999864                          1234567899999


Q ss_pred             cCcCCCchhhHhHHhhhccceeecccC-----------CCCHHHHHHHHHHHHHhCChHHHHhhCCCCCCCCCCCcccHH
Q 042583           73 PLNENNLSRAENFWIYQWKKHGSAAKE-----------FIQPRDYFQMALQLAKDTDLRNTLQNHGAVPILPDGGSYNKR  141 (206)
Q Consensus        73 ~l~~~~~~~~~~fW~hEW~KHGtCs~~-----------~~~~~~YF~~al~l~~~~~i~~~L~~~gI~Ps~~~~~~y~~~  141 (206)
                      ++..++.    .||+|||+|||||+..           ..+|.+||++|++|++++|+.++|+++||+|    +.+|+++
T Consensus        93 ~~~~~~~----~fw~hEW~KHGTCa~~~~~~~~~~~~~~~~~~~YF~~al~L~~~~n~~~~L~~~gI~P----~~~y~~~  164 (222)
T d1bola_          93 SNQGNNN----VFWSHEWSKHGTCVSTYDPDCYDNYEEGEDIVDYFQKAMDLRSQYNVYKAFSSNGITP----GGTYTAT  164 (222)
T ss_dssp             CTTSCHH----HHHHHHHHHTGGGCGGGSGGGCTTCCTTHHHHHHHHHHHHHHHHSCHHHHHHTTTCCS----SEEEEHH
T ss_pred             hhcCchH----HHHHHHHHhcccccccCccccccccccccCHHHHHHHHHHHHHHcccHHHHHhCCcCC----CCcCcHH
Confidence            9875433    7999999999999853           3589999999999999999999999999999    5679999


Q ss_pred             HHHHHHHHhhCCCceEEeeeCCCCCCcEEEEEEEEecCCC-ceecCCCCCCC-CCCceEecCC
Q 042583          142 DYKAAIKNKTGHDPLLKCVKGDDGISHLKEVIICVDDQAQ-SFIQCAKQKDR-CYFDIMFDVP  202 (206)
Q Consensus       142 ~i~~ai~~~~g~~p~l~C~~~~~~~~~L~Ev~iC~~~~~~-~~i~Cp~~~~~-C~~~i~~P~~  202 (206)
                      +|++||++++|++|.|+|.+     ++|.||+||||++++ .+++|+...++ ||++|+|||.
T Consensus       165 ~i~~al~~~~g~~~~l~C~~-----~~L~Ev~iC~~~~~~~~~~~~~~~~~~~C~~~i~~Ppk  222 (222)
T d1bola_         165 EMQSAIESYFGAKAKIDCSS-----GTLSDVALYFYVRGRDTYVITDALSTGSCSGDVEYPTK  222 (222)
T ss_dssp             HHHHHHHHHHSSCCEEEEET-----TEEEEEEEEEEEETTTEEEEECCSCCCSCCSEEEECCC
T ss_pred             HHHHHHHHhhCCCcEEEecC-----CeEeEEEEEEEcCCccceeeCCCCCCCCCCCCeEeCCC
Confidence            99999999999999999987     799999999999985 36777766544 9999999973

>d2ciwa1 a.39.3.1 (A:0-119) Cloroperoxidase {Fungus (Caldariomyces fumago) [TaxId: 5474]}

class: All alpha proteins
fold: EF Hand-like
superfamily: Cloroperoxidase
family: Cloroperoxidase
domain: Cloroperoxidase
species: Fungus (Caldariomyces fumago) [TaxId: 5474]

Probab=89.98  E-value=0.074  Score=37.74  Aligned_cols=36  Identities=31%  Similarity=0.473  Sum_probs=31.4

Q ss_pred             ChHHHHhhCCCCCCCCCCCcccHHHHHHHHHHhhCCCc
Q 042583          118 DLRNTLQNHGAVPILPDGGSYNKRDYKAAIKNKTGHDP  155 (206)
Q Consensus       118 ~i~~~L~~~gI~Ps~~~~~~y~~~~i~~ai~~~~g~~p  155 (206)
                      ..+.+|++.|+.|.  +|+.++.+++.+|+.+++|..+
T Consensus        31 PgLNaLANHGyLPr--dG~nIt~~~l~~a~~~~~n~~~   66 (120)
T d2ciwa1          31 PALNALANHGYIPH--DGRAISRETLQNAFLNHMGIAN   66 (120)
T ss_dssp             HHHHHHHHTTSSCT--TCEEECHHHHHHHHHHHHCBCH
T ss_pred             hhhHHHHhcCccCC--CCcccCHHHHHHHHHHHhCccH
Confidence            45678999999998  8889999999999999998643