Citrus Sinensis ID: 042619
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 402 | ||||||
| 356533127 | 543 | PREDICTED: reticuline oxidase-like prote | 0.997 | 0.738 | 0.738 | 0.0 | |
| 356533129 | 540 | PREDICTED: reticuline oxidase-like prote | 0.997 | 0.742 | 0.738 | 0.0 | |
| 255564335 | 548 | Reticuline oxidase precursor, putative [ | 0.995 | 0.729 | 0.750 | 0.0 | |
| 147846530 | 539 | hypothetical protein VITISV_003756 [Viti | 0.992 | 0.740 | 0.743 | 1e-178 | |
| 356555926 | 543 | PREDICTED: reticuline oxidase-like prote | 0.997 | 0.738 | 0.721 | 1e-178 | |
| 225444135 | 539 | PREDICTED: reticuline oxidase-like prote | 0.992 | 0.740 | 0.738 | 1e-177 | |
| 449435514 | 546 | PREDICTED: reticuline oxidase-like prote | 0.990 | 0.728 | 0.742 | 1e-177 | |
| 224115654 | 545 | predicted protein [Populus trichocarpa] | 0.997 | 0.735 | 0.743 | 1e-177 | |
| 255564331 | 548 | Reticuline oxidase precursor, putative [ | 0.995 | 0.729 | 0.748 | 1e-176 | |
| 224056801 | 507 | predicted protein [Populus trichocarpa] | 0.995 | 0.788 | 0.745 | 1e-176 |
| >gi|356533127|ref|XP_003535119.1| PREDICTED: reticuline oxidase-like protein-like isoform 1 [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 644 bits (1662), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 297/402 (73%), Positives = 353/402 (87%), Gaps = 1/402 (0%)
Query: 1 LAKLRSIEVDINNKTAWVQAGATIGELYYRISEKSNIHGFAAGLCPSVGIGGHITGGGYG 60
L+KLR+I+VDI + TAW+QAGATIGE+YYRI EKS++HGF AGLC S+G+GGHITGG YG
Sbjct: 129 LSKLRAIDVDIEDNTAWIQAGATIGEVYYRIYEKSSVHGFPAGLCTSLGVGGHITGGAYG 188
Query: 61 TMMRKYGLAADNVVDARIVDARGRILDREAMGEDLFWAIRGGGGGSFGIILAWKVKLVPV 120
+MMRKYGL ADNVVDARIVDA G+ILDREAMGEDLFWAIRGGGG SFGI+L WK+KLVPV
Sbjct: 189 SMMRKYGLGADNVVDARIVDANGQILDREAMGEDLFWAIRGGGGASFGILLWWKIKLVPV 248
Query: 121 PATVTVFTVSKTLEQGATKILYKWQQVADKLDEDLFIRVIIKLANAGPKGKRTVTTSYNA 180
P TVTVFTV+++LEQ ATKIL++WQ+VA +DEDLFIRVII+ A G K +RT+TTSYNA
Sbjct: 249 PETVTVFTVTRSLEQDATKILHRWQEVAPYIDEDLFIRVIIQPATVGNKTERTITTSYNA 308
Query: 181 LFLGDSERLLQVMHMWFPELGLTRNDCIETSWIRSVLYIADFQNNTEPEILLEAEFLFKN 240
FLG ++RLLQVM FPELGLT+ DC+ETSWI+SVLYIA + N+T PE+LL+ + FKN
Sbjct: 309 QFLGGADRLLQVMKESFPELGLTKKDCLETSWIKSVLYIAGYPNDTPPEVLLQGKSTFKN 368
Query: 241 YFKAKSDFVKEPIPESVLEGLWKMLLEEDNPVMIWNPYGGMMSKISEYEIPFPHRKGNIF 300
YFKAKSDFV++PIPE+ LEGLW+ LLEED+P+MIWNPYGGMMSK SE +IPFPHR G ++
Sbjct: 369 YFKAKSDFVRDPIPETGLEGLWQRLLEEDSPLMIWNPYGGMMSKFSESDIPFPHRNGTLY 428
Query: 301 KIQYLTLWKDGDQKNATKHNGWIRRLYDYMAPYASIFPRAAYVNYRDLDLGLNKKFNTSY 360
KIQYLTLW+DGD KNA+KH WIR+LY+YM PY S FPR AYVNYRDLDLG+NKK +TSY
Sbjct: 429 KIQYLTLWQDGD-KNASKHEDWIRKLYNYMTPYVSKFPREAYVNYRDLDLGMNKKNSTSY 487
Query: 361 TEASAWGTKYFKDNFNRLVRVKIKVDPDNIFRHEQSIPPVPL 402
+A+AWG YFKDNFNRLV++K KVDPDN+FRHEQSIPP+P+
Sbjct: 488 IQATAWGNMYFKDNFNRLVKIKTKVDPDNVFRHEQSIPPLPV 529
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356533129|ref|XP_003535120.1| PREDICTED: reticuline oxidase-like protein-like isoform 2 [Glycine max] | Back alignment and taxonomy information |
|---|
| >gi|255564335|ref|XP_002523164.1| Reticuline oxidase precursor, putative [Ricinus communis] gi|223537571|gb|EEF39195.1| Reticuline oxidase precursor, putative [Ricinus communis] | Back alignment and taxonomy information |
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| >gi|147846530|emb|CAN81654.1| hypothetical protein VITISV_003756 [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|356555926|ref|XP_003546280.1| PREDICTED: reticuline oxidase-like protein-like [Glycine max] | Back alignment and taxonomy information |
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| >gi|225444135|ref|XP_002268361.1| PREDICTED: reticuline oxidase-like protein [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|449435514|ref|XP_004135540.1| PREDICTED: reticuline oxidase-like protein-like [Cucumis sativus] gi|449488542|ref|XP_004158078.1| PREDICTED: reticuline oxidase-like protein-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
| >gi|224115654|ref|XP_002317089.1| predicted protein [Populus trichocarpa] gi|222860154|gb|EEE97701.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
| >gi|255564331|ref|XP_002523162.1| Reticuline oxidase precursor, putative [Ricinus communis] gi|223537569|gb|EEF39193.1| Reticuline oxidase precursor, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
| >gi|224056801|ref|XP_002299030.1| predicted protein [Populus trichocarpa] gi|222846288|gb|EEE83835.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 402 | ||||||
| TAIR|locus:2204579 | 534 | AT1G30760 [Arabidopsis thalian | 0.977 | 0.735 | 0.619 | 9.1e-132 | |
| TAIR|locus:2044692 | 532 | MEE23 "MATERNAL EFFECT EMBRYO | 0.977 | 0.738 | 0.609 | 4.5e-130 | |
| TAIR|locus:2158740 | 537 | AT5G44400 [Arabidopsis thalian | 0.987 | 0.739 | 0.585 | 1.9e-124 | |
| TAIR|locus:2158730 | 542 | AT5G44390 [Arabidopsis thalian | 0.992 | 0.736 | 0.562 | 1e-116 | |
| TAIR|locus:2158720 | 541 | AT5G44380 [Arabidopsis thalian | 0.990 | 0.735 | 0.544 | 5.8e-114 | |
| TAIR|locus:2133044 | 530 | AT4G20860 [Arabidopsis thalian | 0.987 | 0.749 | 0.493 | 1e-107 | |
| TAIR|locus:2158700 | 532 | AT5G44360 [Arabidopsis thalian | 0.977 | 0.738 | 0.502 | 8.6e-104 | |
| TAIR|locus:2204604 | 527 | AT1G30700 [Arabidopsis thalian | 0.982 | 0.749 | 0.467 | 4.5e-98 | |
| TAIR|locus:2121534 | 532 | AT4G20820 [Arabidopsis thalian | 0.965 | 0.729 | 0.477 | 6.6e-97 | |
| TAIR|locus:2197935 | 530 | AT1G26390 [Arabidopsis thalian | 0.977 | 0.741 | 0.466 | 8.4e-97 |
| TAIR|locus:2204579 AT1G30760 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1292 (459.9 bits), Expect = 9.1e-132, P = 9.1e-132
Identities = 247/399 (61%), Positives = 294/399 (73%)
Query: 1 LAKLRSIEVDINNKTAWVQAGATIGELYYRISEKSNIHGFAAGLCPSVXXXXXXXXXXXX 60
L+KLR I VDI + +AWV AGA+IGE+YYRI EKS IHGF AGLC S+
Sbjct: 137 LSKLRQISVDIESNSAWVHAGASIGEVYYRIQEKSKIHGFPAGLCTSLGIGGHIIGGAYG 196
Query: 61 XMMRKYGLAADNVVDARIVDARGRILDREAMGEDLFWAIRXXXXXSFGIILAWKVKLXXX 120
MMRK+GL ADNV+DARIVDA G+IL+R AMGED+FWAIR SFG+ILAWK+KL
Sbjct: 197 SMMRKFGLGADNVLDARIVDADGKILNRAAMGEDVFWAIRGGGGGSFGVILAWKIKLVPV 256
Query: 121 XXXXXXXXXSKTLEQGATKILYKWQQVADKLDEDLFIRVIIKLANAGPKGK-RTVTTSYN 179
++TLEQ TK+LYKWQQVADKLDEDLFIRVII+ + PK K RT++TSY
Sbjct: 257 PEIVTVFTVTRTLEQDGTKLLYKWQQVADKLDEDLFIRVIIQPTSKTPKSKERTISTSYQ 316
Query: 180 ALFLGDSERLLQVMHMWFPELGLTRNDCIETSWIRSVLYIADFQNNTEPEILLEAEFLFK 239
FLGD+ RLLQVM FP+LGLT+ DC+ETSWI+SV+YIA F + E LL+ + LFK
Sbjct: 317 GQFLGDANRLLQVMQRSFPQLGLTKKDCLETSWIKSVMYIAGFPSTAPSEALLDGKSLFK 376
Query: 240 NYFKAKSDFVKEPIPESVLEGLWKMLLEEDNPVMIWNPYGGMMSKISEYEIPFPHRKGNI 299
NYFKAKSD+V+EPIP LEGLW+ LLEED+P+ IWNPYGGMM+KI E E PFPHR G +
Sbjct: 377 NYFKAKSDYVEEPIPVEGLEGLWEKLLEEDSPLTIWNPYGGMMAKIPETETPFPHRSGTL 436
Query: 300 FKIQYLTLWKDGDQKNATKHNGWIRRLYDYMAPYASIFPRAAYVNYRDLDLGLNKKFNTS 359
FKIQ+LTLW+DG A KH GW+R +Y YM Y S PR+AYVNYRDLDLG+N K +
Sbjct: 437 FKIQWLTLWQDGKTSEA-KHMGWMREMYSYMEQYVSKSPRSAYVNYRDLDLGMNGKGS-- 493
Query: 360 YTEASAWGTKYFKDNFNRLVRVKIKVDPDNIFRHEQSIP 398
+A WG +YFK NF RLV +K K DP+N FRHEQSIP
Sbjct: 494 --DAREWGNRYFKGNFERLVEIKAKFDPENFFRHEQSIP 530
|
|
| TAIR|locus:2044692 MEE23 "MATERNAL EFFECT EMBRYO ARREST 23" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2158740 AT5G44400 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2158730 AT5G44390 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2158720 AT5G44380 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2133044 AT4G20860 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2158700 AT5G44360 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2204604 AT1G30700 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2121534 AT4G20820 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2197935 AT1G26390 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 402 | |||
| COG0277 | 459 | COG0277, GlcD, FAD/FMN-containing dehydrogenases [ | 9e-21 | |
| pfam01565 | 139 | pfam01565, FAD_binding_4, FAD binding domain | 7e-19 | |
| pfam08031 | 45 | pfam08031, BBE, Berberine and berberine like | 9e-19 | |
| TIGR00387 | 413 | TIGR00387, glcD, glycolate oxidase, subunit GlcD | 3e-06 | |
| PRK11230 | 499 | PRK11230, PRK11230, glycolate oxidase subunit GlcD | 5e-04 | |
| TIGR01678 | 438 | TIGR01678, FAD_lactone_ox, sugar 1,4-lactone oxida | 0.004 |
| >gnl|CDD|223354 COG0277, GlcD, FAD/FMN-containing dehydrogenases [Energy production and conversion] | Back alignment and domain information |
|---|
Score = 93.4 bits (232), Expect = 9e-21
Identities = 80/420 (19%), Positives = 139/420 (33%), Gaps = 61/420 (14%)
Query: 1 LAKLRSI-EVDINNKTAWVQAGATIGELYYRISEKSNIHGFAAGLCPS----VGIGGHIT 55
L++L I E+D + TA VQAG T+ +L ++ HG + PS IGG+I
Sbjct: 81 LSRLNRILEIDPEDGTATVQAGVTLEDLEKALAP----HGLFLPVDPSSSGTATIGGNIA 136
Query: 56 GGGYGTMMRKYGLAADNVVDARIVDARGRILD------REAMGEDLFWAIRGGGGGSFGI 109
G +YGL DNV+ R+V G IL ++ G DL A+ G G+ GI
Sbjct: 137 TNAGGLRSLRYGLTRDNVLGLRVVLPDGEILRLGRKLRKDNAGYDL-TALFVGSEGTLGI 195
Query: 110 ILAWKVKLVPVPAT-VTVFTVSKTLEQ-----GATKILYKWQQVADKLDEDLFIRVIIKL 163
I +KL+P+P T T ++E A L + V E + +
Sbjct: 196 ITEATLKLLPLPETKATAVAGFPSIEAAARLAVAAIALLEALGVIPAALEFMDRPIKAAE 255
Query: 164 ANAGPKGKRTVTTSYNALFL-GDSERLLQVMHMWFPELGLTRNDCIETSWIRSVLYIADF 222
A G + + + G E + EL L + + + A+
Sbjct: 256 AYLGGGALPLEAPARLLVEVEGSDEAAVDEALEALGELLLEHGLARDLVVAQDL---AEA 312
Query: 223 QNNTEPEILLEAEFLFKNYFKAKSDFVKEP--IPESVLEGLWKMLLEEDNPVMIWNPYGG 280
+ L + ++E +P L + +L ++
Sbjct: 313 A-----RLWLARKGALAAAGALGPGVIQEDVVVPLEALPEFLREILA-----LLDKAGLA 362
Query: 281 MMSKISEYEIPFPHRKGNIFKIQYLTLWKDGDQKNATKHNGWIRRLYDYMAPYASIFPRA 340
+ + GN+ +L + D + L + + A
Sbjct: 363 LR-----VALFGHAGDGNL----HLNILYDVGDEAEELA--RAEALNEAIEALAV---EL 408
Query: 341 AYVNYRDLDLGLNKKFNTSYTEASAWGTKYFKDNFNRLVRVKIKVDPDNIFRHEQSIPPV 400
+ +G K + + + L +K DP+ IF + +
Sbjct: 409 GGSISGEHGIGRTKA---------EFLELEPGEAWALLRAIKRAFDPNGIFNPGKLFRLL 459
|
Length = 459 |
| >gnl|CDD|216574 pfam01565, FAD_binding_4, FAD binding domain | Back alignment and domain information |
|---|
| >gnl|CDD|219706 pfam08031, BBE, Berberine and berberine like | Back alignment and domain information |
|---|
| >gnl|CDD|129482 TIGR00387, glcD, glycolate oxidase, subunit GlcD | Back alignment and domain information |
|---|
| >gnl|CDD|183043 PRK11230, PRK11230, glycolate oxidase subunit GlcD; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|233525 TIGR01678, FAD_lactone_ox, sugar 1,4-lactone oxidases | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 402 | |||
| PLN02441 | 525 | cytokinin dehydrogenase | 99.97 | |
| PRK11282 | 352 | glcE glycolate oxidase FAD binding subunit; Provis | 99.92 | |
| TIGR01678 | 438 | FAD_lactone_ox sugar 1,4-lactone oxidases. This mo | 99.92 | |
| COG0277 | 459 | GlcD FAD/FMN-containing dehydrogenases [Energy pro | 99.91 | |
| PLN02805 | 555 | D-lactate dehydrogenase [cytochrome] | 99.9 | |
| PRK11230 | 499 | glycolate oxidase subunit GlcD; Provisional | 99.88 | |
| TIGR01676 | 541 | GLDHase galactonolactone dehydrogenase. This model | 99.88 | |
| TIGR01679 | 419 | bact_FAD_ox FAD-linked oxidoreductase. This model | 99.87 | |
| TIGR00387 | 413 | glcD glycolate oxidase, subunit GlcD. This protein | 99.86 | |
| TIGR01677 | 557 | pln_FAD_oxido plant-specific FAD-dependent oxidore | 99.86 | |
| KOG1231 | 505 | consensus Proteins containing the FAD binding doma | 99.85 | |
| PLN02465 | 573 | L-galactono-1,4-lactone dehydrogenase | 99.79 | |
| KOG1232 | 511 | consensus Proteins containing the FAD binding doma | 99.67 | |
| PF08031 | 47 | BBE: Berberine and berberine like ; InterPro: IPR0 | 99.65 | |
| PF01565 | 139 | FAD_binding_4: FAD binding domain This is only a s | 99.61 | |
| KOG1262 | 543 | consensus FAD-binding protein DIMINUTO [General fu | 99.57 | |
| KOG4730 | 518 | consensus D-arabinono-1, 4-lactone oxidase [Defens | 99.53 | |
| PRK11183 | 564 | D-lactate dehydrogenase; Provisional | 99.49 | |
| PRK13905 | 298 | murB UDP-N-acetylenolpyruvoylglucosamine reductase | 99.4 | |
| KOG1233 | 613 | consensus Alkyl-dihydroxyacetonephosphate synthase | 99.2 | |
| PRK14652 | 302 | UDP-N-acetylenolpyruvoylglucosamine reductase; Pro | 98.96 | |
| PRK13903 | 363 | murB UDP-N-acetylenolpyruvoylglucosamine reductase | 98.89 | |
| TIGR00179 | 284 | murB UDP-N-acetylenolpyruvoylglucosamine reductase | 98.88 | |
| PRK13906 | 307 | murB UDP-N-acetylenolpyruvoylglucosamine reductase | 98.86 | |
| PRK12436 | 305 | UDP-N-acetylenolpyruvoylglucosamine reductase; Pro | 98.84 | |
| PRK14649 | 295 | UDP-N-acetylenolpyruvoylglucosamine reductase; Pro | 98.56 | |
| PRK14653 | 297 | UDP-N-acetylenolpyruvoylglucosamine reductase; Pro | 98.27 | |
| PRK14650 | 302 | UDP-N-acetylenolpyruvoylglucosamine reductase; Pro | 97.86 | |
| COG0812 | 291 | MurB UDP-N-acetylmuramate dehydrogenase [Cell enve | 97.72 | |
| PRK00046 | 334 | murB UDP-N-acetylenolpyruvoylglucosamine reductase | 97.61 | |
| PRK14651 | 273 | UDP-N-acetylenolpyruvoylglucosamine reductase; Pro | 97.26 | |
| PRK14648 | 354 | UDP-N-acetylenolpyruvoylglucosamine reductase; Pro | 97.25 | |
| PRK13904 | 257 | murB UDP-N-acetylenolpyruvoylglucosamine reductase | 97.17 | |
| PF09265 | 281 | Cytokin-bind: Cytokinin dehydrogenase 1, FAD and c | 95.36 | |
| PLN00107 | 257 | FAD-dependent oxidoreductase; Provisional | 90.63 | |
| PF02913 | 248 | FAD-oxidase_C: FAD linked oxidases, C-terminal dom | 86.53 | |
| PF04030 | 259 | ALO: D-arabinono-1,4-lactone oxidase ; InterPro: I | 82.45 |
| >PLN02441 cytokinin dehydrogenase | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.8e-28 Score=245.12 Aligned_cols=141 Identities=21% Similarity=0.279 Sum_probs=120.1
Q ss_pred CCCCCc------e-EEeCCCCEEEEcCCCCHHHHHHHHHhcCCceee-ccCCCCcccchhhhcCCCCCCccccccccccc
Q 042619 1 LAKLRS------I-EVDINNKTAWVQAGATIGELYYRISEKSNIHGF-AAGLCPSVGIGGHITGGGYGTMMRKYGLAADN 72 (402)
Q Consensus 1 l~~~~~------i-~~d~~~~~~~v~~G~~~~~l~~~l~~~~~~~~~-~~g~~~~vgvgG~~~~gg~g~~~~~~G~~~d~ 72 (402)
|++||+ + ++|.+..+|+|++|++|.||.+++.++|. ++ ..+.+..++|||.+.++|+|..+.+||..+||
T Consensus 116 ms~Ln~i~~~~~ii~vd~~~~~VtV~aG~~~~dv~~~l~~~Gl--aP~~~~d~~~~TVGG~ist~G~gg~s~ryG~~~d~ 193 (525)
T PLN02441 116 MRSLRGGVRGPPVIVVSGDGPYVDVSGGELWIDVLKATLKHGL--APRSWTDYLYLTVGGTLSNAGISGQAFRHGPQISN 193 (525)
T ss_pred CCCCCCcCccCceEEEcCCCCEEEEcCCCCHHHHHHHHHHCCC--ccCCccccCceEEeEEcCCCCccccccccCcHHHh
Confidence 678998 3 78999999999999999999999999873 33 34555678999999999999999999999999
Q ss_pred EeEEEEEcCCCcEEe-ccCCCCChHHHHhhcCCCCceEEEEEEEEeeecCceEEEEEEEecchhhHHHHHHHH
Q 042619 73 VVDARIVDARGRILD-REAMGEDLFWAIRGGGGGSFGIILAWKVKLVPVPATVTVFTVSKTLEQGATKILYKW 144 (402)
Q Consensus 73 v~~~~vv~~dG~~~~-~~~~~~dLf~a~~G~g~g~~Gvvt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (402)
|+++||||+||++++ ++.+|+|||||++||+ |+|||||++++|++|.|+....+.+.+....++.+.++.+
T Consensus 194 Vl~leVVtadGevv~~s~~~n~DLF~Av~Ggl-G~fGIIT~atlrL~Pap~~v~~~~~~y~~~~~~~~d~~~l 265 (525)
T PLN02441 194 VLELDVVTGKGEVVTCSPTQNSDLFFAVLGGL-GQFGIITRARIALEPAPKRVRWIRVLYSDFSTFTRDQERL 265 (525)
T ss_pred EEEEEEEeCCceEEEeCCCCChhHHHhhccCC-CCcEEEEEEEEEEEecCCceEEEEEEcCCHHHHHHHHHHH
Confidence 999999999999997 8888999999999987 8999999999999999997766666666444444333333
|
|
| >PRK11282 glcE glycolate oxidase FAD binding subunit; Provisional | Back alignment and domain information |
|---|
| >TIGR01678 FAD_lactone_ox sugar 1,4-lactone oxidases | Back alignment and domain information |
|---|
| >COG0277 GlcD FAD/FMN-containing dehydrogenases [Energy production and conversion] | Back alignment and domain information |
|---|
| >PLN02805 D-lactate dehydrogenase [cytochrome] | Back alignment and domain information |
|---|
| >PRK11230 glycolate oxidase subunit GlcD; Provisional | Back alignment and domain information |
|---|
| >TIGR01676 GLDHase galactonolactone dehydrogenase | Back alignment and domain information |
|---|
| >TIGR01679 bact_FAD_ox FAD-linked oxidoreductase | Back alignment and domain information |
|---|
| >TIGR00387 glcD glycolate oxidase, subunit GlcD | Back alignment and domain information |
|---|
| >TIGR01677 pln_FAD_oxido plant-specific FAD-dependent oxidoreductase | Back alignment and domain information |
|---|
| >KOG1231 consensus Proteins containing the FAD binding domain [Energy production and conversion] | Back alignment and domain information |
|---|
| >PLN02465 L-galactono-1,4-lactone dehydrogenase | Back alignment and domain information |
|---|
| >KOG1232 consensus Proteins containing the FAD binding domain [Energy production and conversion] | Back alignment and domain information |
|---|
| >PF08031 BBE: Berberine and berberine like ; InterPro: IPR012951 This domain is found in the berberine bridge and berberine bridge-like enzymes, which are involved in the biosynthesis of numerous isoquinoline alkaloids | Back alignment and domain information |
|---|
| >PF01565 FAD_binding_4: FAD binding domain This is only a subset of the Pfam family; InterPro: IPR006094 Various enzymes use FAD as a co-factor, most of these enzymes are oxygen-dependent oxidoreductases, containing a covalently bound FAD group which is attached to a histidine via an 8-alpha-(N3-histidyl)-riboflavin linkage | Back alignment and domain information |
|---|
| >KOG1262 consensus FAD-binding protein DIMINUTO [General function prediction only] | Back alignment and domain information |
|---|
| >KOG4730 consensus D-arabinono-1, 4-lactone oxidase [Defense mechanisms] | Back alignment and domain information |
|---|
| >PRK11183 D-lactate dehydrogenase; Provisional | Back alignment and domain information |
|---|
| >PRK13905 murB UDP-N-acetylenolpyruvoylglucosamine reductase; Provisional | Back alignment and domain information |
|---|
| >KOG1233 consensus Alkyl-dihydroxyacetonephosphate synthase [General function prediction only] | Back alignment and domain information |
|---|
| >PRK14652 UDP-N-acetylenolpyruvoylglucosamine reductase; Provisional | Back alignment and domain information |
|---|
| >PRK13903 murB UDP-N-acetylenolpyruvoylglucosamine reductase; Provisional | Back alignment and domain information |
|---|
| >TIGR00179 murB UDP-N-acetylenolpyruvoylglucosamine reductase | Back alignment and domain information |
|---|
| >PRK13906 murB UDP-N-acetylenolpyruvoylglucosamine reductase; Provisional | Back alignment and domain information |
|---|
| >PRK12436 UDP-N-acetylenolpyruvoylglucosamine reductase; Provisional | Back alignment and domain information |
|---|
| >PRK14649 UDP-N-acetylenolpyruvoylglucosamine reductase; Provisional | Back alignment and domain information |
|---|
| >PRK14653 UDP-N-acetylenolpyruvoylglucosamine reductase; Provisional | Back alignment and domain information |
|---|
| >PRK14650 UDP-N-acetylenolpyruvoylglucosamine reductase; Provisional | Back alignment and domain information |
|---|
| >COG0812 MurB UDP-N-acetylmuramate dehydrogenase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
| >PRK00046 murB UDP-N-acetylenolpyruvoylglucosamine reductase; Provisional | Back alignment and domain information |
|---|
| >PRK14651 UDP-N-acetylenolpyruvoylglucosamine reductase; Provisional | Back alignment and domain information |
|---|
| >PRK14648 UDP-N-acetylenolpyruvoylglucosamine reductase; Provisional | Back alignment and domain information |
|---|
| >PRK13904 murB UDP-N-acetylenolpyruvoylglucosamine reductase; Provisional | Back alignment and domain information |
|---|
| >PF09265 Cytokin-bind: Cytokinin dehydrogenase 1, FAD and cytokinin binding; InterPro: IPR015345 This domain adopts an alpha+beta sandwich structure with an antiparallel beta-sheet, in a ferredoxin-like fold | Back alignment and domain information |
|---|
| >PLN00107 FAD-dependent oxidoreductase; Provisional | Back alignment and domain information |
|---|
| >PF02913 FAD-oxidase_C: FAD linked oxidases, C-terminal domain; InterPro: IPR004113 Some oxygen-dependent oxidoreductases are flavoproteins that contain a covalently bound FAD group which is attached to a histidine via an 8-alpha-(N3-histidyl)-riboflavin linkage | Back alignment and domain information |
|---|
| >PF04030 ALO: D-arabinono-1,4-lactone oxidase ; InterPro: IPR007173 This domain is specific to D-arabinono-1,4-lactone oxidase 1 | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 402 | ||||
| 3vte_A | 518 | Crystal Structure Of Tetrahydrocannabinolic Acid Sy | 3e-95 | ||
| 4dns_A | 497 | Crystal Structure Of Bermuda Grass Isoallergen Bg60 | 3e-89 | ||
| 3tsh_A | 500 | Crystal Structure Of Phl P 4, A Grass Pollen Allerg | 5e-87 | ||
| 3fw9_A | 495 | Structure Of Berberine Bridge Enzyme In Complex Wit | 8e-81 | ||
| 3fw7_A | 498 | Structure Of Berberine Bridge Enzyme, H104a Variant | 8e-81 | ||
| 3d2d_A | 538 | Structure Of Berberine Bridge Enzyme In Complex Wit | 9e-81 | ||
| 4ec3_A | 519 | Structure Of Berberine Bridge Enzyme, H174a Variant | 9e-81 | ||
| 3gsy_A | 519 | Structure Of Berberine Bridge Enzyme In Complex Wit | 9e-81 | ||
| 3fw8_A | 495 | Structure Of Berberine Bridge Enzyme, C166a Variant | 1e-79 | ||
| 3fwa_A | 497 | Structure Of Berberine Bridge Enzyme, C166a Variant | 1e-79 | ||
| 2ipi_A | 521 | Crystal Structure Of Aclacinomycin Oxidoreductase L | 4e-16 | ||
| 2y08_A | 530 | Structure Of The Substrate-Free Fad-Dependent Tiran | 1e-13 | ||
| 2wdw_A | 523 | The Native Crystal Structure Of The Primary Hexose | 5e-11 | ||
| 3pop_A | 501 | The Crystal Structure Of Gilr, An Oxidoreductase Th | 9e-11 | ||
| 3rj8_A | 473 | Crystal Structure Of Carbohydrate Oxidase From Micr | 3e-07 | ||
| 2bvf_A | 459 | Crystal Structure Of 6-Hydoxy-D-Nicotine Oxidase Fr | 4e-05 |
| >pdb|3VTE|A Chain A, Crystal Structure Of Tetrahydrocannabinolic Acid Synthase From Cannabis Sativa Length = 518 | Back alignment and structure |
|
| >pdb|4DNS|A Chain A, Crystal Structure Of Bermuda Grass Isoallergen Bg60 Provides Insight Into The Various Cross-Allergenicity Of The Pollen Group 4 Allergens Length = 497 | Back alignment and structure |
| >pdb|3TSH|A Chain A, Crystal Structure Of Phl P 4, A Grass Pollen Allergen With Glucose Dehydrogenase Activity Length = 500 | Back alignment and structure |
| >pdb|3FW9|A Chain A, Structure Of Berberine Bridge Enzyme In Complex With (S)-Scoulerine Length = 495 | Back alignment and structure |
| >pdb|3FW7|A Chain A, Structure Of Berberine Bridge Enzyme, H104a Variant Length = 498 | Back alignment and structure |
| >pdb|3D2D|A Chain A, Structure Of Berberine Bridge Enzyme In Complex With (S)-Reticuline Length = 538 | Back alignment and structure |
| >pdb|4EC3|A Chain A, Structure Of Berberine Bridge Enzyme, H174a Variant In Complex With (S)-Reticuline Length = 519 | Back alignment and structure |
| >pdb|3GSY|A Chain A, Structure Of Berberine Bridge Enzyme In Complex With Dehydroscoulerine Length = 519 | Back alignment and structure |
| >pdb|3FW8|A Chain A, Structure Of Berberine Bridge Enzyme, C166a Variant Length = 495 | Back alignment and structure |
| >pdb|3FWA|A Chain A, Structure Of Berberine Bridge Enzyme, C166a Variant In Complex With (S)-Reticuline Length = 497 | Back alignment and structure |
| >pdb|2IPI|A Chain A, Crystal Structure Of Aclacinomycin Oxidoreductase Length = 521 | Back alignment and structure |
| >pdb|2Y08|A Chain A, Structure Of The Substrate-Free Fad-Dependent Tirandamycin Oxidase Taml Length = 530 | Back alignment and structure |
| >pdb|2WDW|A Chain A, The Native Crystal Structure Of The Primary Hexose Oxidase ( Dbv29) In Antibiotic A40926 Biosynthesis Length = 523 | Back alignment and structure |
| >pdb|3POP|A Chain A, The Crystal Structure Of Gilr, An Oxidoreductase That Catalyzes The Terminal Step Of Gilvocarcin Biosynthesis Length = 501 | Back alignment and structure |
| >pdb|3RJ8|A Chain A, Crystal Structure Of Carbohydrate Oxidase From Microdochium Nivale Length = 473 | Back alignment and structure |
| >pdb|2BVF|A Chain A, Crystal Structure Of 6-Hydoxy-D-Nicotine Oxidase From Arthrobacter Nicotinovorans. Crystal Form 3 (P1) Length = 459 | Back alignment and structure |
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 402 | |||
| 3vte_A | 518 | Tetrahydrocannabinolic acid synthase; BI-covalent | 1e-171 | |
| 3fw9_A | 495 | Reticuline oxidase; BI-covalent flavinylation, N-g | 1e-170 | |
| 2ipi_A | 521 | Aclacinomycin oxidoreductase (aknox); anthracyclin | 1e-148 | |
| 1zr6_A | 503 | Glucooligosaccharide oxidase; alpha + beta, flavoe | 1e-145 | |
| 3rja_A | 473 | Carbohydrate oxidase; protein-substrate analogue c | 1e-144 | |
| 3pop_A | 501 | GILR oxidase; FAD binding protein, gilvocarcin, gi | 1e-144 | |
| 2wdx_A | 523 | Putative hexose oxidase; oxidoreductase-antibiotic | 1e-143 | |
| 2y3s_A | 530 | TAML; oxidoreductase; HET: FAD TIR; 1.67A {Strepto | 1e-140 | |
| 2bvf_A | 459 | 6-hydroxy-D-nicotine oxidase; autoflavinylation, e | 2e-99 | |
| 2exr_A | 524 | Cytokinin dehydrogenase 7; AT5G21482.1, cytokinin | 7e-39 | |
| 1w1o_A | 534 | Cytokinin dehydrogenase 1; flavin, oxidoreductase, | 2e-31 | |
| 4feh_A | 481 | Oxidoreductase DPRE1; alpha+beta, decaprenylphosph | 8e-17 | |
| 2vfr_A | 422 | Xylitol oxidase, alditol oxidase; FAD, sugar, poly | 1e-15 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 1e-11 | |
| 2i0k_A | 561 | Oxidoreductase; MIX alpha beta, covalent FAD, flav | 4e-11 | |
| 3js8_A | 540 | Cholesterol oxidase; cholsterol, organic solvent s | 9e-09 | |
| 2yvs_A | 219 | Glycolate oxidase subunit GLCE; oxidoreductase; 2. | 1e-07 | |
| 2uuu_A | 584 | Alkyldihydroxyacetonephosphate synthase; transfera | 2e-07 | |
| 1e8g_A | 560 | Vanillyl-alcohol oxidase; oxidoreductase, flavoenz | 5e-07 | |
| 1wvf_A | 520 | 4-cresol dehydrogenase [hydroxylating] flavoprote | 1e-06 | |
| 3pm9_A | 476 | Putative oxidoreductase; putative D-2-hydroxygluta | 3e-04 |
| >3vte_A Tetrahydrocannabinolic acid synthase; BI-covalent flavinylation, oxidoreductase; HET: NAG FAD; 2.75A {Cannabis sativa} Length = 518 | Back alignment and structure |
|---|
Score = 487 bits (1254), Expect = e-171
Identities = 197/412 (47%), Positives = 275/412 (66%), Gaps = 13/412 (3%)
Query: 1 LAKLRSIEVDINNKTAWVQAGATIGELYYRISEKSNIHGFAAGLCPSVGIGGHITGGGYG 60
L + SI++D++++TAWV+AGAT+GE+YY I+EK+ F G CP+VG+GGH +GGGYG
Sbjct: 105 LRNMHSIKIDVHSQTAWVEAGATLGEVYYWINEKNENLSFPGGYCPTVGVGGHFSGGGYG 164
Query: 61 TMMRKYGLAADNVVDARIVDARGRILDREAMGEDLFWAIRGGGGGSFGIILAWKVKLVPV 120
+MR YGLAADN++DA +V+ G++LDR++MGEDLFWAIRGGGG +FGII AWK+KLV V
Sbjct: 165 ALMRNYGLAADNIIDAHLVNVDGKVLDRKSMGEDLFWAIRGGGGENFGIIAAWKIKLVAV 224
Query: 121 PATVTVFTVSKTLE-QGATKILYKWQQVADKLDEDLFIRVIIKLANAGP---KGKRTVTT 176
P+ T+F+V K +E G K+ KWQ +A K D+DL + N K K TV
Sbjct: 225 PSKSTIFSVKKNMEIHGLVKLFNKWQNIAYKYDKDLVLMTHFITKNITDNHGKNKTTVHG 284
Query: 177 SYNALFLGDSERLLQVMHMWFPELGLTRNDCIETSWIRSVLYIADFQN----NTEPEILL 232
++++F G + L+ +M+ FPELG+ + DC E SWI + ++ + N N + EILL
Sbjct: 285 YFSSIFHGGVDSLVDLMNKSFPELGIKKTDCKEFSWIDTTIFYSGVVNFNTANFKKEILL 344
Query: 233 EAEFLFKNYFKAKSDFVKEPIPESVLEGLWKMLLEEDNP--VMIWNPYGGMMSKISEYEI 290
+ K F K D+VK+PIPE+ + + + L EED + + PYGG+M +ISE I
Sbjct: 345 DRSAGKKTAFSIKLDYVKKPIPETAMVKILEKLYEEDVGAGMYVLYPYGGIMEEISESAI 404
Query: 291 PFPHRKGNIFKIQYLTLWKDGDQKNATKHNGWIRRLYDYMAPYASIFPRAAYVNYRDLDL 350
PFPHR G ++++ Y W+ + + KH W+R +Y++ PY S PR AY+NYRDLDL
Sbjct: 405 PFPHRAGIMYELWYTASWEKQE--DNEKHINWVRSVYNFTTPYVSQNPRLAYLNYRDLDL 462
Query: 351 GLNKKF-NTSYTEASAWGTKYFKDNFNRLVRVKIKVDPDNIFRHEQSIPPVP 401
G +YT+A WG KYF NFNRLV+VK KVDP+N FR+EQSIPP+P
Sbjct: 463 GKTNHASPNNYTQARIWGEKYFGKNFNRLVKVKTKVDPNNFFRNEQSIPPLP 514
|
| >3fw9_A Reticuline oxidase; BI-covalent flavinylation, N-glycosylation, alakloid biosynt oxidoreductase, alkaloid metabolism; HET: FAD SLX NAG MAN; 1.49A {Eschscholzia californica} PDB: 3d2h_A* 3d2d_A* 3d2j_A* 3gsy_A* 3fw8_A* 3fw7_A* 3fwa_A* Length = 495 | Back alignment and structure |
|---|
| >2ipi_A Aclacinomycin oxidoreductase (aknox); anthracycline, flavoenzyme, twinning, MAD; HET: AKY FAD; 1.65A {Streptomyces galilaeus} Length = 521 | Back alignment and structure |
|---|
| >1zr6_A Glucooligosaccharide oxidase; alpha + beta, flavoenzyme, oxidoreductase; HET: NAG FAD; 1.55A {Acremonium strictum} PDB: 2axr_A* 3e0t_A* 3hsu_A* Length = 503 | Back alignment and structure |
|---|
| >3rja_A Carbohydrate oxidase; protein-substrate analogue complex, FAD binding domain, BERB berberine-like domain, glucooligosaccharide oxidase; HET: FAD NAG ABL TRS; 2.10A {Microdochium nivale} PDB: 3rj8_A* Length = 473 | Back alignment and structure |
|---|
| >3pop_A GILR oxidase; FAD binding protein, gilvocarcin, gilvocarcin biosynthesis, covalently bound FAD, oxidoreductase; HET: FAD; 1.65A {Streptomyces griseoflavus} PDB: 3pqb_A* Length = 501 | Back alignment and structure |
|---|
| >2wdx_A Putative hexose oxidase; oxidoreductase-antibiotic complex, glycopeptide; HET: FAD GHP 3MY 3FG OMY BMA NAG N1L T55; 2.30A {Nonomuraea SP} PDB: 2wdw_A* Length = 523 | Back alignment and structure |
|---|
| >2y3s_A TAML; oxidoreductase; HET: FAD TIR; 1.67A {Streptomyces SP} PDB: 2y3r_A* 2y08_A* 2y4g_A* Length = 530 | Back alignment and structure |
|---|
| >2bvf_A 6-hydroxy-D-nicotine oxidase; autoflavinylation, enantiomeric substrates, flavoenzymes, NI degradation; HET: FAD; 1.92A {Arthrobacter nicotinovorans} PDB: 2bvg_A* 2bvh_A* Length = 459 | Back alignment and structure |
|---|
| >2exr_A Cytokinin dehydrogenase 7; AT5G21482.1, cytokinin oxidase/dehydrogenase, CKX, structura genomics, protein structure initiative; HET: MSE FAD; 1.70A {Arabidopsis thaliana} PDB: 2q4w_A* Length = 524 | Back alignment and structure |
|---|
| >1w1o_A Cytokinin dehydrogenase 1; flavin, oxidoreductase, flavoprotein, FAD; HET: NAG FAD; 1.7A {Zea mays} SCOP: d.58.32.4 d.145.1.1 PDB: 1w1q_A* 1w1r_A* 1w1s_A* 3dq0_A* 2qkn_A* 3c0p_A* 3bw7_A* 2qpm_A* 3kjm_A* Length = 534 | Back alignment and structure |
|---|
| >4feh_A Oxidoreductase DPRE1; alpha+beta, decaprenylphosphoryl-beta-D-RIBO; HET: FAD; 2.04A {Mycobacterium tuberculosis} PDB: 4fdo_A* 4fdn_A* 4fdp_A* 4ff6_A* Length = 481 | Back alignment and structure |
|---|
| >2vfr_A Xylitol oxidase, alditol oxidase; FAD, sugar, polyol, flavin, flavoprotein, oxidoreductase; HET: FAD; 1.1A {Streptomyces coelicolor} PDB: 2vfs_A* 2vft_A* 2vfu_A* 2vfv_A* Length = 422 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >2i0k_A Oxidoreductase; MIX alpha beta, covalent FAD, flavoenzyme; HET: FAD; 1.60A {Brevibacterium sterolicum} SCOP: d.58.32.3 d.145.1.1 PDB: 1i19_A* Length = 561 | Back alignment and structure |
|---|
| >3js8_A Cholesterol oxidase; cholsterol, organic solvent stability, oxygen channel, FAD, flavoprotein, oxidoreductase; HET: FAD SUC; 1.54A {Chromobacterium SP} Length = 540 | Back alignment and structure |
|---|
| >2yvs_A Glycolate oxidase subunit GLCE; oxidoreductase; 2.00A {Thermus thermophilus} Length = 219 | Back alignment and structure |
|---|
| >2uuu_A Alkyldihydroxyacetonephosphate synthase; transferase, lavoprotein, lipid synthesis, peroxisomal disor; HET: FAD PL3; 1.95A {Dictyostelium discoideum} PDB: 2uuv_A* Length = 584 | Back alignment and structure |
|---|
| >1e8g_A Vanillyl-alcohol oxidase; oxidoreductase, flavoenzyme, specificity; HET: FAD FCR; 2.1A {Penicillium simplicissimum} SCOP: d.58.32.1 d.145.1.1 PDB: 1e8f_A* 1e8h_A* 1qlt_A* 1qlu_A* 1vao_A* 1ahv_A* 1ahz_A* 1ahu_A* 2vao_A* 1w1j_A* 1dzn_A* 1w1l_A* 1e0y_A* 1w1k_A* 1w1m_A* Length = 560 | Back alignment and structure |
|---|
| >1wvf_A 4-cresol dehydrogenase [hydroxylating] flavoprote subunit; flavoprotein, electron-transfer, FAD, oxidoreductase; HET: FAD; 1.30A {Pseudomonas putida} SCOP: d.58.32.1 d.145.1.1 PDB: 1wve_A* 1dii_A* 1diq_A* Length = 520 | Back alignment and structure |
|---|
| >3pm9_A Putative oxidoreductase; putative D-2-hydroxyglutarate dehydrogenase, putative D-LACT dehydrogenase; HET: FAD; 2.57A {Rhodopseudomonas palustris} Length = 476 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 402 | |||
| 3vte_A | 518 | Tetrahydrocannabinolic acid synthase; BI-covalent | 100.0 | |
| 3fw9_A | 495 | Reticuline oxidase; BI-covalent flavinylation, N-g | 100.0 | |
| 3tsh_A | 500 | Pollen allergen PHL P 4; flavoprotein, BI-covalent | 100.0 | |
| 3rja_A | 473 | Carbohydrate oxidase; protein-substrate analogue c | 100.0 | |
| 3pop_A | 501 | GILR oxidase; FAD binding protein, gilvocarcin, gi | 100.0 | |
| 2y3s_A | 530 | TAML; oxidoreductase; HET: FAD TIR; 1.67A {Strepto | 100.0 | |
| 2wdx_A | 523 | Putative hexose oxidase; oxidoreductase-antibiotic | 100.0 | |
| 1zr6_A | 503 | Glucooligosaccharide oxidase; alpha + beta, flavoe | 100.0 | |
| 2ipi_A | 521 | Aclacinomycin oxidoreductase (aknox); anthracyclin | 100.0 | |
| 2bvf_A | 459 | 6-hydroxy-D-nicotine oxidase; autoflavinylation, e | 100.0 | |
| 1w1o_A | 534 | Cytokinin dehydrogenase 1; flavin, oxidoreductase, | 99.97 | |
| 2exr_A | 524 | Cytokinin dehydrogenase 7; AT5G21482.1, cytokinin | 99.94 | |
| 3pm9_A | 476 | Putative oxidoreductase; putative D-2-hydroxygluta | 99.92 | |
| 4bby_A | 658 | Alkyldihydroxyacetonephosphate synthase, peroxiso; | 99.9 | |
| 2uuu_A | 584 | Alkyldihydroxyacetonephosphate synthase; transfera | 99.87 | |
| 4feh_A | 481 | Oxidoreductase DPRE1; alpha+beta, decaprenylphosph | 99.87 | |
| 2yvs_A | 219 | Glycolate oxidase subunit GLCE; oxidoreductase; 2. | 99.86 | |
| 1wvf_A | 520 | 4-cresol dehydrogenase [hydroxylating] flavoprote | 99.85 | |
| 2vfr_A | 422 | Xylitol oxidase, alditol oxidase; FAD, sugar, poly | 99.83 | |
| 1e8g_A | 560 | Vanillyl-alcohol oxidase; oxidoreductase, flavoenz | 99.82 | |
| 1f0x_A | 571 | DLDH, D-lactate dehydrogenase; oxidoreductase; HET | 99.76 | |
| 2i0k_A | 561 | Oxidoreductase; MIX alpha beta, covalent FAD, flav | 99.75 | |
| 3js8_A | 540 | Cholesterol oxidase; cholsterol, organic solvent s | 99.75 | |
| 3tx1_A | 322 | UDP-N-acetylenolpyruvoylglucosamine reductase; str | 99.46 | |
| 1hsk_A | 326 | UDP-N-acetylenolpyruvoylglucosamine reductase; pep | 99.43 | |
| 3i99_A | 357 | UDP-N-acetylenolpyruvoylglucosamine reductase; str | 99.42 | |
| 1uxy_A | 340 | MURB, uridine diphospho-N-acetylenolpyruvylglucosa | 99.34 | |
| 2gqt_A | 268 | UDP-N-acetylenolpyruvylglucosamine reductase; pept | 99.27 | |
| 2vfr_A | 422 | Xylitol oxidase, alditol oxidase; FAD, sugar, poly | 91.44 | |
| 1ffv_C | 287 | CUTM, flavoprotein of carbon monoxide dehydrogenas | 88.55 | |
| 1wvf_A | 520 | 4-cresol dehydrogenase [hydroxylating] flavoprote | 86.45 | |
| 4bby_A | 658 | Alkyldihydroxyacetonephosphate synthase, peroxiso; | 82.6 |
| >3vte_A Tetrahydrocannabinolic acid synthase; BI-covalent flavinylation, oxidoreductase; HET: NAG FAD; 2.75A {Cannabis sativa} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.5e-71 Score=562.14 Aligned_cols=399 Identities=49% Similarity=0.943 Sum_probs=336.5
Q ss_pred CCCCCceEEeCCCCEEEEcCCCCHHHHHHHHHhcCCceeeccCCCCcccchhhhcCCCCCCcccccccccccEeEEEEEc
Q 042619 1 LAKLRSIEVDINNKTAWVQAGATIGELYYRISEKSNIHGFAAGLCPSVGIGGHITGGGYGTMMRKYGLAADNVVDARIVD 80 (402)
Q Consensus 1 l~~~~~i~~d~~~~~~~v~~G~~~~~l~~~l~~~~~~~~~~~g~~~~vgvgG~~~~gg~g~~~~~~G~~~d~v~~~~vv~ 80 (402)
|++||+|++|++.++|+||||+++++|+++|.++|.++.+++|.|++|||||+++|||+|.++++||+.+|+|++++||+
T Consensus 105 l~~l~~i~vd~~~~~v~V~aG~~l~~l~~~l~~~g~gl~~~~G~~~~vgvgG~~~gGg~G~~s~~~G~~~D~V~~~evV~ 184 (518)
T 3vte_A 105 LRNMHSIKIDVHSQTAWVEAGATLGEVYYWINEKNENLSFPGGYCPTVGVGGHFSGGGYGALMRNYGLAADNIIDAHLVN 184 (518)
T ss_dssp CTTCCCEEEETTTTEEEEETTCBHHHHHHHHHHHCTTEECCCCSCTTCBHHHHHHTCCCCTTHHHHCCGGGGEEEEEEEC
T ss_pred CCCCceeEEeCCCCEEEEeCCccHHHHHHHHHHhCCCceecCCCCCCeeeeeeeCCCCCccccCCCCchhheEEEEEEEc
Confidence 68899999999999999999999999999999987778899999999999999999999999999999999999999999
Q ss_pred CCCcEEeccCCCCChHHHHhhcCCCCceEEEEEEEEeeecCceEEEEEEEecch-hhHHHHHHHHHHHHhhccccceeeE
Q 042619 81 ARGRILDREAMGEDLFWAIRGGGGGSFGIILAWKVKLVPVPATVTVFTVSKTLE-QGATKILYKWQQVADKLDEDLFIRV 159 (402)
Q Consensus 81 ~dG~~~~~~~~~~dLf~a~~G~g~g~~Gvvt~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (402)
+||++++.+.+|+|||||+||||+|+|||||+++||++|.|+.+..+.+.+... +++.+++..|+++++++|+++++.+
T Consensus 185 adG~iv~~~~~~~DLf~a~rGgg~g~fGIVt~~~l~l~p~p~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~p~~l~~~~ 264 (518)
T 3vte_A 185 VDGKVLDRKSMGEDLFWAIRGGGGENFGIIAAWKIKLVAVPSKSTIFSVKKNMEIHGLVKLFNKWQNIAYKYDKDLVLMT 264 (518)
T ss_dssp TTCCEECHHHHCHHHHHHHTTSCGGGTCEEEEEEEECEECCSCEEEEEEEECCCHHHHHHHHHHHHHHGGGSCTTEEEEE
T ss_pred cCCeEEEeeccccchhhheecccCCCceEEEEEEEEEEeCCCeEEEEEEEecCCHHHHHHHHHHHHHHHHcCCHhHeEEE
Confidence 999999754468999999999855899999999999999999877777777543 5678899999999999999999888
Q ss_pred EEeeccCC---CCCCceeEEEEEEEEecChHHHHHHHhhhccCCCCCcCcccccchHHHHHHhhccCCC-Cc---hhhhh
Q 042619 160 IIKLANAG---PKGKRTVTTSYNALFLGDSERLLQVMHMWFPELGLTRNDCIETSWIRSVLYIADFQNN-TE---PEILL 232 (402)
Q Consensus 160 ~~~~~~~~---~~~~~~~~i~~~~~~~g~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~---~~~~~ 232 (402)
.+...++. +.+...+.+.+.++|+|+.+++.+.|.+.+++++....++.+++|++++.+++.++.+ .+ .+.++
T Consensus 265 ~~~~~~~~p~~~~~~~~~~~~~~~~~~G~~~~~~~~l~~~~~~lg~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~l~ 344 (518)
T 3vte_A 265 HFITKNITDNHGKNKTTVHGYFSSIFHGGVDSLVDLMNKSFPELGIKKTDCKEFSWIDTTIFYSGVVNFNTANFKKEILL 344 (518)
T ss_dssp EEEEESCC-------CEEEEEEEEEEESCHHHHHHHHHHHCGGGCCCGGGEEEECHHHHHHHTSSSCCC-----CGGGGG
T ss_pred EEcccCCCCCCCcCCCceEEEEEEEEeCCHHHHhhhhhhhhhhcCCCccceeecchhhhhhhhhcCCccCCccchhhhhc
Confidence 87753321 1111235678889999999999999988788887766778889999988887755543 33 44455
Q ss_pred hhhhcccccccccccccCCCCCHHHHHHHHHHHhcC--CCcEEEEeeCCCCCCCCCCCCCCCccccCceEEEEEEEEeCC
Q 042619 233 EAEFLFKNYFKAKSDFVKEPIPESVLEGLWKMLLEE--DNPVMIWNPYGGMMSKISEYEIPFPHRKGNIFKIQYLTLWKD 310 (402)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~--~~~~~~~~~~Gg~~~~~~~~~ta~~~R~~~~~~~~~~~~w~~ 310 (402)
++....+.+|+.|+.++.++++++.++.+++.+.+. +.+.+.+.++||++++++.++||||||+...|.+++.+.|.+
T Consensus 345 ~~~~~~~~~~k~ks~~~~~~l~~~~i~~l~~~~~~~~~~~~~v~~~~~GGa~~~v~~~~TAf~hR~~~~~~~~~~~~w~~ 424 (518)
T 3vte_A 345 DRSAGKKTAFSIKLDYVKKPIPETAMVKILEKLYEEDVGAGMYVLYPYGGIMEEISESAIPFPHRAGIMYELWYTASWEK 424 (518)
T ss_dssp CTTCSCCBEEEEEEEEESSCCCHHHHHHHHHGGGGSCTTTEEEEEEECCGGGGTSCTTSSSCCCCTTCCEEEEEEEEECC
T ss_pred cCCcCcccceeeechhcccCCCHHHHHHHHHHHHhCCCCCeEEEEeecCccccCCCCCCCcccccCcceEEEEEEEecCC
Confidence 554444557788999998889999999999988763 346789999999999999999999999844899999999976
Q ss_pred CCccchhhHHHHHHHHHHhccccccCCCCceeccccCCccC-CCCCCCcchhcccccccccccccHHHHHHhhhccCCCC
Q 042619 311 GDQKNATKHNGWIRRLYDYMAPYASIFPRAAYVNYRDLDLG-LNKKFNTSYTEASAWGTKYFKDNFNRLVRVKIKVDPDN 389 (402)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~Y~N~~d~~~~-~~~~~~~~~~~~~~w~~~~~g~n~~rL~~iK~kyDP~~ 389 (402)
+. .+++..+|++++++.|.|+.+..+.|+|+||.|.+++ .+...+++|..++.|++.|||+||+||++||+||||+|
T Consensus 425 ~~--~~~~~~~w~~~~~~~~~p~~~~~~~g~YvNy~D~dl~~~~~~~~~~~~~~~~w~~~Yyg~N~~RL~~vK~~yDP~n 502 (518)
T 3vte_A 425 QE--DNEKHINWVRSVYNFTTPYVSQNPRLAYLNYRDLDLGKTNHASPNNYTQARIWGEKYFGKNFNRLVKVKTKVDPNN 502 (518)
T ss_dssp TT--THHHHHHHHHHHHHHTGGGSCCTTCCCCTTSCCGGGCCCCTTSCCCHHHHHHHHHHHSSTHHHHHHHHHHHHCTTC
T ss_pred cc--hhHHHHHHHHHHHHHhccccCCCCccccccCCCccccccccccccchhhhhhHHHHHhHhHHHHHHHHHhhcCchh
Confidence 53 4578899999999999999765668999999998865 21112344555668999999999999999999999999
Q ss_pred CCcCCCCCCCCC
Q 042619 390 IFRHEQSIPPVP 401 (402)
Q Consensus 390 lF~~~~~i~~~~ 401 (402)
||+++|+|+|.+
T Consensus 503 ~F~~~QsI~p~~ 514 (518)
T 3vte_A 503 FFRNEQSIPPLP 514 (518)
T ss_dssp CSCCTTCCCCCC
T ss_pred cccCCCCCCCCC
Confidence 999999999874
|
| >3fw9_A Reticuline oxidase; BI-covalent flavinylation, N-glycosylation, alakloid biosynt oxidoreductase, alkaloid metabolism; HET: FAD SLX NAG MAN; 1.49A {Eschscholzia californica} PDB: 3d2h_A* 3d2d_A* 3d2j_A* 3gsy_A* 4ec3_A* 3fw8_A* 3fw7_A* 3fwa_A* | Back alignment and structure |
|---|
| >3tsh_A Pollen allergen PHL P 4; flavoprotein, BI-covalent flavinylation, oxidoreductase, Glu dehydrogenase, N-glycosylation, allergy, dehydrogenase; HET: FDA; 1.90A {Phleum pratense} PDB: 3tsj_A* | Back alignment and structure |
|---|
| >3rja_A Carbohydrate oxidase; protein-substrate analogue complex, FAD binding domain, BERB berberine-like domain, glucooligosaccharide oxidase; HET: FAD NAG ABL TRS; 2.10A {Microdochium nivale} PDB: 3rj8_A* | Back alignment and structure |
|---|
| >3pop_A GILR oxidase; FAD binding protein, gilvocarcin, gilvocarcin biosynthesis, covalently bound FAD, oxidoreductase; HET: FAD; 1.65A {Streptomyces griseoflavus} PDB: 3pqb_A* | Back alignment and structure |
|---|
| >2y3s_A TAML; oxidoreductase; HET: FAD TIR; 1.67A {Streptomyces SP} PDB: 2y3r_A* 2y08_A* 2y4g_A* | Back alignment and structure |
|---|
| >2wdx_A Putative hexose oxidase; oxidoreductase-antibiotic complex, glycopeptide; HET: FAD GHP 3MY 3FG OMY BMA NAG N1L T55; 2.30A {Nonomuraea SP} PDB: 2wdw_A* | Back alignment and structure |
|---|
| >1zr6_A Glucooligosaccharide oxidase; alpha + beta, flavoenzyme, oxidoreductase; HET: NAG FAD; 1.55A {Acremonium strictum} PDB: 2axr_A* 3e0t_A* 3hsu_A* | Back alignment and structure |
|---|
| >2ipi_A Aclacinomycin oxidoreductase (aknox); anthracycline, flavoenzyme, twinning, MAD; HET: AKY FAD; 1.65A {Streptomyces galilaeus} | Back alignment and structure |
|---|
| >2bvf_A 6-hydroxy-D-nicotine oxidase; autoflavinylation, enantiomeric substrates, flavoenzymes, NI degradation; HET: FAD; 1.92A {Arthrobacter nicotinovorans} PDB: 2bvg_A* 2bvh_A* | Back alignment and structure |
|---|
| >1w1o_A Cytokinin dehydrogenase 1; flavin, oxidoreductase, flavoprotein, FAD; HET: NAG FAD; 1.7A {Zea mays} SCOP: d.58.32.4 d.145.1.1 PDB: 1w1q_A* 1w1r_A* 1w1s_A* 3dq0_A* 2qkn_A* 3c0p_A* 3bw7_A* 2qpm_A* 3kjm_A* | Back alignment and structure |
|---|
| >2exr_A Cytokinin dehydrogenase 7; AT5G21482.1, cytokinin oxidase/dehydrogenase, CKX, structura genomics, protein structure initiative; HET: MSE FAD; 1.70A {Arabidopsis thaliana} PDB: 2q4w_A* | Back alignment and structure |
|---|
| >3pm9_A Putative oxidoreductase; putative D-2-hydroxyglutarate dehydrogenase, putative D-LACT dehydrogenase; HET: FAD; 2.57A {Rhodopseudomonas palustris} | Back alignment and structure |
|---|
| >4bby_A Alkyldihydroxyacetonephosphate synthase, peroxiso; transferase, plasmalogen, flavin, peroxisome; HET: FAD; 1.90A {Cavia porcellus} PDB: 4bc9_A* 4bca_A* 4bc7_A* | Back alignment and structure |
|---|
| >2uuu_A Alkyldihydroxyacetonephosphate synthase; transferase, lavoprotein, lipid synthesis, peroxisomal disor; HET: FAD PL3; 1.95A {Dictyostelium discoideum} PDB: 2uuv_A* | Back alignment and structure |
|---|
| >4feh_A Oxidoreductase DPRE1; alpha+beta, decaprenylphosphoryl-beta-D-RIBO; HET: FAD; 2.04A {Mycobacterium tuberculosis} PDB: 4fdo_A* 4fdn_A* 4fdp_A* 4ff6_A* 4aut_A* 4f4q_A* 4g3t_A 4g3u_A | Back alignment and structure |
|---|
| >2yvs_A Glycolate oxidase subunit GLCE; oxidoreductase; 2.00A {Thermus thermophilus} | Back alignment and structure |
|---|
| >1wvf_A 4-cresol dehydrogenase [hydroxylating] flavoprote subunit; flavoprotein, electron-transfer, FAD, oxidoreductase; HET: FAD; 1.30A {Pseudomonas putida} SCOP: d.58.32.1 d.145.1.1 PDB: 1wve_A* 1dii_A* 1diq_A* | Back alignment and structure |
|---|
| >2vfr_A Xylitol oxidase, alditol oxidase; FAD, sugar, polyol, flavin, flavoprotein, oxidoreductase; HET: FAD; 1.1A {Streptomyces coelicolor} PDB: 2vfs_A* 2vft_A* 2vfu_A* 2vfv_A* | Back alignment and structure |
|---|
| >1e8g_A Vanillyl-alcohol oxidase; oxidoreductase, flavoenzyme, specificity; HET: FAD FCR; 2.1A {Penicillium simplicissimum} SCOP: d.58.32.1 d.145.1.1 PDB: 1e8f_A* 1e8h_A* 1qlt_A* 1qlu_A* 1vao_A* 1ahv_A* 1ahz_A* 1ahu_A* 2vao_A* 1w1j_A* 1dzn_A* 1w1l_A* 1e0y_A* 1w1k_A* 1w1m_A* | Back alignment and structure |
|---|
| >1f0x_A DLDH, D-lactate dehydrogenase; oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: d.58.32.2 d.145.1.1 | Back alignment and structure |
|---|
| >2i0k_A Oxidoreductase; MIX alpha beta, covalent FAD, flavoenzyme; HET: FAD; 1.60A {Brevibacterium sterolicum} SCOP: d.58.32.3 d.145.1.1 PDB: 1i19_A* | Back alignment and structure |
|---|
| >3js8_A Cholesterol oxidase; cholsterol, organic solvent stability, oxygen channel, FAD, flavoprotein, oxidoreductase; HET: FAD SUC; 1.54A {Chromobacterium SP} | Back alignment and structure |
|---|
| >3tx1_A UDP-N-acetylenolpyruvoylglucosamine reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: FAD; 2.69A {Listeria monocytogenes} | Back alignment and structure |
|---|
| >1hsk_A UDP-N-acetylenolpyruvoylglucosamine reductase; peptidoglycan synthesis, cell WALL, cell division, oxidoreductase, NADP, flavoprotein, FAD; HET: FAD; 2.30A {Staphylococcus aureus} SCOP: d.145.1.2 d.146.1.1 | Back alignment and structure |
|---|
| >3i99_A UDP-N-acetylenolpyruvoylglucosamine reductase; structural genomics, center for structural of infectious diseases, csgid; HET: FAD; 2.20A {Vibrio cholerae} | Back alignment and structure |
|---|
| >1uxy_A MURB, uridine diphospho-N-acetylenolpyruvylglucosamine reductase; peptidoglycan synthesis, cell WALL, cell division, oxidoreductase, NADP; HET: FAD EPU; 1.80A {Escherichia coli} SCOP: d.145.1.2 d.146.1.1 PDB: 1mbb_A* 1mbt_A* 2q85_A* 2mbr_A* | Back alignment and structure |
|---|
| >2gqt_A UDP-N-acetylenolpyruvylglucosamine reductase; peptidoglycan biosynthesis, enolpyruvyl-UDP-N- acetylglucosamine, flavin adenine dinucleotide; HET: FAD; 1.30A {Thermus caldophilus} PDB: 2gqu_A* | Back alignment and structure |
|---|
| >2vfr_A Xylitol oxidase, alditol oxidase; FAD, sugar, polyol, flavin, flavoprotein, oxidoreductase; HET: FAD; 1.1A {Streptomyces coelicolor} PDB: 2vfs_A* 2vft_A* 2vfu_A* 2vfv_A* | Back alignment and structure |
|---|
| >1ffv_C CUTM, flavoprotein of carbon monoxide dehydrogenase; hydrolase; HET: ARO PCD FAD; 2.25A {Hydrogenophaga pseudoflava} SCOP: d.87.2.1 d.145.1.3 PDB: 1ffu_C* | Back alignment and structure |
|---|
| >1wvf_A 4-cresol dehydrogenase [hydroxylating] flavoprote subunit; flavoprotein, electron-transfer, FAD, oxidoreductase; HET: FAD; 1.30A {Pseudomonas putida} SCOP: d.58.32.1 d.145.1.1 PDB: 1wve_A* 1dii_A* 1diq_A* | Back alignment and structure |
|---|
| >4bby_A Alkyldihydroxyacetonephosphate synthase, peroxiso; transferase, plasmalogen, flavin, peroxisome; HET: FAD; 1.90A {Cavia porcellus} PDB: 4bc9_A* 4bca_A* 4bc7_A* | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 402 | ||||
| d1w1oa2 | 206 | d.145.1.1 (A:40-245) Cytokinin dehydrogenase 1 {Ma | 7e-11 | |
| d2i0ka2 | 216 | d.145.1.1 (A:58-273) Cholesterol oxidase {Brevibac | 1e-09 |
| >d1w1oa2 d.145.1.1 (A:40-245) Cytokinin dehydrogenase 1 {Maize (Zea mays) [TaxId: 4577]} Length = 206 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: FAD-binding/transporter-associated domain-like superfamily: FAD-binding/transporter-associated domain-like family: FAD-linked oxidases, N-terminal domain domain: Cytokinin dehydrogenase 1 species: Maize (Zea mays) [TaxId: 4577]
Score = 59.2 bits (142), Expect = 7e-11
Identities = 20/115 (17%), Positives = 44/115 (38%), Gaps = 3/115 (2%)
Query: 6 SIEVDINNKTAWVQAGATIGELYYRISEKSNIHGFAAGLCPSVGIGGHITGGGYGTMMRK 65
I V + + ++ + + +GG ++ G +
Sbjct: 93 RINVSADGRYVDAGGEQVWIDVLRASLARGVAPRSW-TDYLYLTVGGTLSNAGISGQAFR 151
Query: 66 YGLAADNVVDARIVDARGRILD-REAMGEDLFWAIRGGGGGSFGIILAWKVKLVP 119
+G NV++ ++ G ++ + + DLF A+ GG G FG+I ++ + P
Sbjct: 152 HGPQISNVLEMDVITGHGEMVTCSKQLNADLFDAVLGGLG-QFGVITRARIAVEP 205
|
| >d2i0ka2 d.145.1.1 (A:58-273) Cholesterol oxidase {Brevibacterium sterolicum [TaxId: 1702]} Length = 216 | Back information, alignment and structure |
|---|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 402 | |||
| d1w1oa2 | 206 | Cytokinin dehydrogenase 1 {Maize (Zea mays) [TaxId | 99.92 | |
| d1wvfa2 | 236 | Flavoprotein subunit of p-cresol methylhydroxylase | 99.86 | |
| d1e8ga2 | 268 | Vanillyl-alcohol oxidase {Fungus (Penicillium simp | 99.76 | |
| d2i0ka2 | 216 | Cholesterol oxidase {Brevibacterium sterolicum [Ta | 99.74 | |
| d1f0xa2 | 265 | D-lactate dehydrogenase {Escherichia coli [TaxId: | 98.89 | |
| d1uxya1 | 198 | Uridine diphospho-N-Acetylenolpyruvylglucosamine r | 98.85 | |
| d1hska1 | 194 | Uridine diphospho-N-Acetylenolpyruvylglucosamine r | 98.83 | |
| d1w1oa1 | 289 | Cytokinin dehydrogenase 1 {Maize (Zea mays) [TaxId | 93.22 | |
| d1e8ga1 | 287 | Vanillyl-alcohol oxidase {Fungus (Penicillium simp | 80.26 | |
| d1f0xa1 | 294 | D-lactate dehydrogenase {Escherichia coli [TaxId: | 80.06 |
| >d1w1oa2 d.145.1.1 (A:40-245) Cytokinin dehydrogenase 1 {Maize (Zea mays) [TaxId: 4577]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: FAD-binding/transporter-associated domain-like superfamily: FAD-binding/transporter-associated domain-like family: FAD-linked oxidases, N-terminal domain domain: Cytokinin dehydrogenase 1 species: Maize (Zea mays) [TaxId: 4577]
Probab=99.92 E-value=1.2e-25 Score=201.38 Aligned_cols=117 Identities=18% Similarity=0.292 Sum_probs=105.6
Q ss_pred CCCCCce------EEeCCCCEEEEcCCCCHHHHHHHHHhcCCceeec-cCCCCcccchhhhcCCCCCCcccccccccccE
Q 042619 1 LAKLRSI------EVDINNKTAWVQAGATIGELYYRISEKSNIHGFA-AGLCPSVGIGGHITGGGYGTMMRKYGLAADNV 73 (402)
Q Consensus 1 l~~~~~i------~~d~~~~~~~v~~G~~~~~l~~~l~~~~~~~~~~-~g~~~~vgvgG~~~~gg~g~~~~~~G~~~d~v 73 (402)
|++||+| ++|++..+++||||+++.||.++|.++| +.++ .+.+..+++||+++++|+|..+++||+.+|+|
T Consensus 82 l~~l~~i~~~~~~~id~~~~~v~v~aG~~~~~l~~~l~~~G--l~~~~~~~~~~~tvGG~i~~~g~g~~s~~~G~~~d~v 159 (206)
T d1w1oa2 82 MASLGDAAAPPRINVSADGRYVDAGGEQVWIDVLRASLARG--VAPRSWTDYLYLTVGGTLSNAGISGQAFRHGPQISNV 159 (206)
T ss_dssp GGGGGCSSSSCSEEECTTSSEEEEETTCBHHHHHHHHHTTT--EEESCCCSSCCSBHHHHHTTCCCSTTHHHHCCGGGSE
T ss_pred ccccceeeeceeEEEecCCCEEEEEcceehhhhhhhhhccc--cccccCCccCceEEeeeeccccceeccccccceeeee
Confidence 4667775 7999999999999999999999999987 4443 44556788999999999999999999999999
Q ss_pred eEEEEEcCCCcEEe-ccCCCCChHHHHhhcCCCCceEEEEEEEEeeec
Q 042619 74 VDARIVDARGRILD-REAMGEDLFWAIRGGGGGSFGIILAWKVKLVPV 120 (402)
Q Consensus 74 ~~~~vv~~dG~~~~-~~~~~~dLf~a~~G~g~g~~Gvvt~~~~~~~~~ 120 (402)
+++|||++||++++ ++.+|+||||++||+. |+|||||+++||++|+
T Consensus 160 ~~~evV~~~G~~~~~s~~~~~dl~~a~~g~~-G~~Giit~~tl~l~PA 206 (206)
T d1w1oa2 160 LEMDVITGHGEMVTCSKQLNADLFDAVLGGL-GQFGVITRARIAVEPA 206 (206)
T ss_dssp EEEEEEETTSCEEEEESSSSHHHHHHHTTCT-TCSEEEEEEEEEEEEC
T ss_pred eEEEEEcCCCcEEEECCCCCHHHHHHHhhCC-CccEeEEEEEEEEEcC
Confidence 99999999999997 7778999999999987 8999999999999985
|
| >d1wvfa2 d.145.1.1 (A:7-242) Flavoprotein subunit of p-cresol methylhydroxylase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
| >d1e8ga2 d.145.1.1 (A:6-273) Vanillyl-alcohol oxidase {Fungus (Penicillium simplicissimum) [TaxId: 69488]} | Back information, alignment and structure |
|---|
| >d2i0ka2 d.145.1.1 (A:58-273) Cholesterol oxidase {Brevibacterium sterolicum [TaxId: 1702]} | Back information, alignment and structure |
|---|
| >d1f0xa2 d.145.1.1 (A:9-273) D-lactate dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1uxya1 d.145.1.2 (A:3-200) Uridine diphospho-N-Acetylenolpyruvylglucosamine reductase (MurB), N-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1hska1 d.145.1.2 (A:15-208) Uridine diphospho-N-Acetylenolpyruvylglucosamine reductase (MurB), N-terminal domain {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
| >d1w1oa1 d.58.32.4 (A:246-534) Cytokinin dehydrogenase 1 {Maize (Zea mays) [TaxId: 4577]} | Back information, alignment and structure |
|---|
| >d1e8ga1 d.58.32.1 (A:274-560) Vanillyl-alcohol oxidase {Fungus (Penicillium simplicissimum) [TaxId: 69488]} | Back information, alignment and structure |
|---|
| >d1f0xa1 d.58.32.2 (A:274-567) D-lactate dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|