Citrus Sinensis ID: 042646

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560
Protein Sequence
MQDIPLKTNSCAESTIDISSNSDLIPESTVDNNSSLIEAQYNSGLAYLENKKKVKGQQNQNRDNAPTMDSTESTVDVSSNPGLIEACDNSPLMRSGNKKNRKRRRRKRKSSAPKTDNTDADLQEVTSKTMTAPFGMALVDMITKAVSETDPLEVEASGDTSLKPVLAAAPKETNGSVDTSVKLDFPKNLSRSKRKRLRRKLHKESLHVLERDAKDCALAGDKSLKNNMLQEKHSSLQPSVDICSQNELVVKQSNGDVCLFNGHNAFENNGVIDLHMANGKQLEKKEAKCAPKVTELDLTTMRKDFPISEKQSSSSNSANRSLMENDDVHPESHPVSSETRTIIAYKRKKRVKTYIWTKKKKCSNLLVNGVDCIKEDGDSLMKNVSLLTEGHIEQKLSDKLDKIQITVHDASHGNDVSDEIPSHPKEYNISGHDRSCKLPKKQHVEVETKTTEGFPPSHLGVVESGTGLHDSSEEENHSQTLQYPPGNVCIGHSKKKLLVLDLNGLLVDIVASPYHRYRPDKMVSNKAVFKRPCCDEFLSFCFERFNVGVWSRGSRKIWTM
Secondary Structure (PSIPRED)
ccccccccccccccEEEccccccccccccccccccHHHHHHccccHHHcccccccccccccccccccccccccEEEccccccccccccccccccccccHHHHHHHHHHcccccccccccHHHHHHHHccccccHHHHHHHHHHHHHcccccccccccccccccccccccccccccccEEEEEEccccccHHHHHHHHHHHHHHHHHHHHHHcccHHHHccccccccccccccccccccccccccccccEEEccccccEEEccccHHHccccccHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHccccccEEEHHHHcccccccccccccccEEccccccccccccccccccccccHHHHHHHHcccccccccccccccccccccccccccccccccccccccHHHHccccccccccccccccccccccccccccccccccccccccccccccccEEEEEEccccEEEEEccccccccccEEEccccccccccHHHHHHHHHHccEEEEEcccccccccc
Secondary Structure Prediction (SSPRO)
cccccccccccccEEEEEccccccccccccccccHHHHHHHccHHHHHHccccccccccccccccccccccccEEEcccccccEEEccccccccccccccHHHHHHHccccccccccccccHHHHcccccccHHHHHHHHHHHHHHccccccEEEEccccccccEEEccccccccccccEEEccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHcccccccccccEEEcccEEEEEcccccEccccccHHHHcccccccccccccccccHccccccHHEccccEEEcccccccccccccccccccHHccccccccccccccccccEEEEccccEEEEEEEEHccccccHHHccccEEEEccccccccccccccccEEEEcccHHHcEEEEEcccccccccccccccccccEEcccccccccccccccEEEEEEccccccccccccEccccccccccHHcccccEEEcccccccccccccEEEEEEcccEEEEcccccccccccccEEcccEEEcccccHHHHHHHHHHcEEEEEEccccEEEcc
Coil and Loop (DISEMBL)
mqdiplktnscaestidissnsdlipestvdnnsSLIEAQYNSGlaylenkkkvkgqqnqnrdnaptmdstestvdvssnpglieacdnsplmrsgnkknrkrrrrkrkssapktdntdadLQEVtsktmtapfGMALVDMITKAvsetdpleveasgdtslkpvlaaapketngsvdtsvkldfpknlsrSKRKRLRRKLHKESLHVLERDAKdcalagdkslknnmlqekhsslqpsvdicsqnelvvkqsngdvclfnghnafenngvidlhMANGKQLEKkeakcapkvteldlttmrkdfpisekqssssnsanrslmenddvhpeshpvssetRTIIAYKRKKRVKTYIWTKKKKCSNLLVNGVDCIKEDGDSLMKNVSLLTEGHIEQKLSDKLDKIQItvhdashgndvsdeipshpkeynisghdrscklpkkqhVEVEtkttegfppshlgvvesgtglhdsseeenhsqtlqyppgnvcighskkKLLVLDLNGLLvdivaspyhryrpdkmvsnkavfkrpccdeFLSFCFERfnvgvwsrgsrkiwtm
Flexible Loop (DISEMBL)
mqdiplktnscaestidissnsdlipESTVDNNSSLIEAQYNSGLAYLENKKkvkgqqnqnrdnaptmdstestvdvssnpglieacdnsplmrsgnkknrkrrrrkrkssapktdntdadlqevtskTMTAPFGMALVDMITKAVSETDPLEveasgdtslkpvlaaapketngsvdtsvkldfpknlsrskrkrlrrklhkeslhvlerdakdCALAGDKSLKNNMLQEKHSSLQPSVDICSQNELVVKQSNGDVCLFNGHNAFENNGVIDLHMANGKQLEKkeakcapkvteldlttmrkdfpisekqssssnsaNRSLMEnddvhpeshpvssetrtiiaykrkkrvktyiwtkkkkcsnllvNGVDCIKEDGDSLMKNVSLLTEGHIEQKLSDKLDKIQITVHDashgndvsdeipSHPKEYNISGHDRSCKLPKKQHVEVETkttegfppshlgVVESGTGLHDSSEEENHSQTLQYPPGNVCIGHSKKKLLVLDLNGLLVDIVaspyhryrpdkmvsnkavfkRPCCDEFLSFcferfnvgvwsrgsrkiwtm
Low Complexity Region (SEG)
MQDIPLKTNSCAESTIDISSNSDLIPESTVDNNSSLIEAQYNSGLAYLEnkkkvkgqqnqnRDNAPTMDSTESTVDVSSNPGLIEACDNSPLMRSGnkknrkrrrrkrkSSAPKTDNTDADLQEVTSKTMTAPFGMALVDMITKAVSETDPLEVEASGDTSLKPVLAAAPKETNGSVDTSVKLDFPknlsrskrkrlrrklhkeslHVLERDAKDCALAGDKSLKNNMLQEKHSSLQPSVDICSQNELVVKQSNGDVCLFNGHNAFENNGVIDLHMANGKQLEKKEAKCAPKVTELDLTTMRKDFPISEKQssssnsanrsLMENDDVHPESHPVSSETRTIIAYKRKKRVKTYIWTKKKKCSNLLVNGVDCIKEDGDSLMKNVSLLTEGHIEQKLSDKLDKIQITVHDASHGNDVSDEIPSHPKEYNISGHDRSCKLPKKQHVEVETKTTEGFPPSHLGVVESGTGLHDSSEEENHSQTLQYPPGNVCIGHSkkkllvldlngllvdIVASPYHRYRPDKMVSNKAVFKRPCCDEFLSFCFERFNVGVWSRGSRKIWTM
Disordered region (IsUnstruct)
*************************************************************************************************************************************FGMALVDMIT*************************************************************************************************DICSQNELVVKQSNGDVCLFNGHNAFENNGVIDLHMAN**************************************************************TIIAYKRKKRVKTYIWTKKKKCSNLLVNGVDCIKEDGDSLMKNVSLLTEGHIEQKL***LDKIQIT******************************************************************************PGNVCIGHSKKKLLVLDLNGLLVDIVASPYHRYRPDKMVSNKAVFKRPCCDEFLSFCFERFNVGVWSRGSRKI***
Disordered Region (DISOPRED)
****P***NSCAESTIDISSNSDLIPESTVDNNSSLIEAQYNSGLAY***************************VDVSSNPGLIEACD**********************************QEVTSKTMTAPFGMALVDMITKAVSE****************************VDTSV***************************LERDAKDCA****************************NELVVKQSNGDVCLFNGHNAFENNGVID**************KCAPKVTELDLTT**********************************VSS***********************************************************************************************************************************************************SKKKLLVLDLNGLLVDIVASPYHRYRPDKMVSNKAVFKRPCCDEFLSFCFERFNVGVWSRGSRKIWTM
Disordered Region (DISEMBL)
MQDIPLKTNSCAESTIDISSNSDLIPESTVDNNSSLIEAQYNSGLAYLENKK**************************SNPGLIEACDNSPLMR*************************ADLQEVTSKTMTAPFGMALVDMITKAVSETDPLEVEASGDTSLKPVLAAAPKETNGSVDTSVKLDFPKNLSRSKRKRLRRKLHKESLHVLERDAKDCALAGDKSLKNNMLQEKHSSLQPSVDICSQNELVVKQSNGDVCLFNGHNAFENNGVIDLHMANGKQLEKKEAKCAPKVTELDLTTMRKDFP*********************************RTIIAYKRKKRVKTYIWTKKKKCSNLLVNGVDCIKEDGDSLMKNVSLLTEGHIEQKLSDKLDKIQITVHDASHGNDVSDEIPSHPKEYNISGHDRSCKLPKKQHVEVETKTTEGFPPSHLGVVES***************TLQYPPGNVCIGHSKKKLLVLDLNGLLVDIVASPYHRYRPDKMVSNKAVFKRPCCDEFLSFCFERFNVGVWSRGSRKIWTM
Disordered Region (DISPRO)
**DIPLKTNSCAESTIDISSNSDLIPESTVDNNSSLIEAQYNSGLAYLENKK*********************TVDVSSNPGLIEACDNSPL***************************ADLQEVTSKTMTAPFGMALVDMITKAVSETDPLEVEASGDTSLKPVLAAAP*****SVDTSVKLDFPKNLSRSKRKRLRRKLHKESLHVLERDAKDCALAGDKSLKNN****KHSSLQPSVDICSQNELVVKQSNGDVCLFNGHNAFENNGVIDLHMANGKQLEKKEAKCAPKVTELDLTTMRKDFPI************************SHPVSSETRTIIAYKRKKRVKTYIWTKKKKCSNLLVNGVDCIKEDGDSLMKNVSLLTEGHIEQKLSDKLDKIQITVHDASHGNDVSDEIPSHPKEYNISGHDRSCKLPKKQHVEVETKTTEGFPPSHLGVVESGTGLHDSSE*ENHSQTLQYPPGNVCIGHSKKKLLVLDLNGLLVDIVASPYHRYRPDKMVSNKAVFKRPCCDEFLSFCFERFNVGVWSRGSRKIWT*
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MQDIPLKTNSCAESTIDISSNSDLIPESTVDNNSSLIEAQYNSGLAYLENKKKVKGQQNQNRDNAPTMDSTESTVDVSSNPGLIEACDNSPLMRSGNKKNRKRRRRKRKSSAPKTDNTDADLQEVTSKTMTAPFGMALVDMITKAVSETDPLEVEASGDTSLKPVLAAAPKETNGSVDTSVKLDFPKNLSRSKRKRLRRKLHKESLHVLERDAKDCALAGDKSLKNNMLQEKHSSLQPSVDICSQNELVVKQSNGDVCLFNGHNAFENNGVIDLHMANGKQLEKKEAKCAPKVTELDLTTMRKDFPISEKQSSSSNSANRSLMENDDVHPESHPVSSETRTIIAYKRKKRVKTYIWTKKKKCSNLLVNGVDCIKEDGDSLMKNVSLLTEGHIEQKLSDKLDKIQITVHDASHGNDVSDEIPSHPKEYNISGHDRSCKLPKKQHVEVETKTTEGFPPSHLGVVESGTGLHDSSEEENHSQTLQYPPGNVCIGHSKKKLLVLDLNGLLVDIVASPYHRYRPDKMVSNKAVFKRPCCDEFLSFCFERFNVGVWSRGSRKIWTM
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	560
225456581	652	PREDICTED: uncharacterized protein LOC10	0.175	0.150	0.52	2e-20
449477513	531	PREDICTED: uncharacterized protein LOC10	0.108	0.114	0.672	1e-16
449441105	593	PREDICTED: uncharacterized protein LOC10	0.108	0.102	0.672	1e-16
449487062	540	PREDICTED: uncharacterized LOC101203219	0.210	0.218	0.409	2e-16
449439657	410	PREDICTED: uncharacterized protein LOC10	0.210	0.287	0.409	3e-16
356568774	213	PREDICTED: uncharacterized FCP1 homology	0.123	0.323	0.583	9e-15
255547163	576	conserved hypothetical protein [Ricinus	0.110	0.107	0.580	7e-14
224080213	209	predicted protein [Populus trichocarpa]	0.112	0.301	0.587	3e-13
357450991	731	hypothetical protein MTR_2g060670 [Medic	0.383	0.294	0.299	3e-13
334186930	1057	haloacid dehalogenase-like hydrolase dom	0.126	0.067	0.452	9e-12

>gi|225456581|ref|XP_002265588.1| PREDICTED: uncharacterized protein LOC100263840 [Vitis vinifera] gi|297734071|emb|CBI15318.3| unnamed protein product [Vitis vinifera]

 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 52/100 (52%), Positives = 67/100 (67%), Gaps = 2/100 (2%)

Query: 457 SHLGVVESGTGLHDSSEEENHSQTLQYPPGNVCIGHSKKKLLVLDLNGLLVDIVASPYHR 516
           SHLG ++    +   ++EEN   T Q  P      HS+KKLL+LD+NGLL DIV      
Sbjct: 386 SHLGAIKDDVKI--VNKEENPPHTSQSLPERAVSCHSRKKLLILDVNGLLADIVPYFVEG 443

Query: 517 YRPDKMVSNKAVFKRPCCDEFLSFCFERFNVGVWSRGSRK 556
           Y+PD +VS K+VFKRP CD+FL FCFERF+VGVWS  ++K
Sbjct: 444 YKPDIVVSRKSVFKRPFCDDFLQFCFERFDVGVWSSRTKK 483

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449477513|ref|XP_004155045.1| PREDICTED: uncharacterized protein LOC101224607 [Cucumis sativus]

 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 41/61 (67%), Positives = 47/61 (77%)

Query: 491 GHSKKKLLVLDLNGLLVDIVASPYHRYRPDKMVSNKAVFKRPCCDEFLSFCFERFNVGVW 550
           G SKKKLL+LD+NGLLVD V      Y PD ++S KAVFKRP CD+FL FCFERF VG+W
Sbjct: 372 GFSKKKLLILDVNGLLVDFVPYFPDGYTPDFVISRKAVFKRPFCDDFLQFCFERFEVGIW 431

Query: 551 S 551
           S
Sbjct: 432 S 432

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449441105|ref|XP_004138324.1| PREDICTED: uncharacterized protein LOC101219396 [Cucumis sativus]

 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 41/61 (67%), Positives = 47/61 (77%)

Query: 491 GHSKKKLLVLDLNGLLVDIVASPYHRYRPDKMVSNKAVFKRPCCDEFLSFCFERFNVGVW 550
           G SKKKLL+LD+NGLLVD V      Y PD ++S KAVFKRP CD+FL FCFERF VG+W
Sbjct: 372 GFSKKKLLILDVNGLLVDFVPYFPDGYTPDFVISRKAVFKRPFCDDFLQFCFERFEVGIW 431

Query: 551 S 551
           S
Sbjct: 432 S 432

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449487062|ref|XP_004157484.1| PREDICTED: uncharacterized LOC101203219 [Cucumis sativus]

 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 50/122 (40%), Positives = 68/122 (55%), Gaps = 4/122 (3%)

Query: 435 SCKLPKKQHVEVETKTTEGFPPSHLGVVESGTGLHDSSEEENHSQTLQYPPGNVCIGHSK 494
           SC  P  ++ E   +    F  S     E+ + ++  +EEE     L        IG + 
Sbjct: 261 SCVPPGLENAETAKEEVVCFTDSG----ETSSVVNAMAEEETPPLVLDTSEKGDSIGSTT 316

Query: 495 KKLLVLDLNGLLVDIVASPYHRYRPDKMVSNKAVFKRPCCDEFLSFCFERFNVGVWSRGS 554
           KKLLVLD+NGLL D +      Y+PD ++  KAVFKRP CD+F+ FCFERF VGVWS  +
Sbjct: 317 KKLLVLDVNGLLADFICYVPPGYKPDIIIRQKAVFKRPFCDDFIKFCFERFEVGVWSSRT 376

Query: 555 RK 556
           R+
Sbjct: 377 RR 378

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449439657|ref|XP_004137602.1| PREDICTED: uncharacterized protein LOC101203219 [Cucumis sativus]

 Score = 93.6 bits (231), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 50/122 (40%), Positives = 68/122 (55%), Gaps = 4/122 (3%)

Query: 435 SCKLPKKQHVEVETKTTEGFPPSHLGVVESGTGLHDSSEEENHSQTLQYPPGNVCIGHSK 494
           SC  P  ++ E   +    F  S     E+ + ++  +EEE     L        IG + 
Sbjct: 131 SCVPPGLENAETAKEEVVCFTDSG----ETSSVVNAMAEEETPPLVLDTSEKGDSIGSTT 186

Query: 495 KKLLVLDLNGLLVDIVASPYHRYRPDKMVSNKAVFKRPCCDEFLSFCFERFNVGVWSRGS 554
           KKLLVLD+NGLL D +      Y+PD ++  KAVFKRP CD+F+ FCFERF VGVWS  +
Sbjct: 187 KKLLVLDVNGLLADFICYVPPGYKPDIIIRQKAVFKRPFCDDFIKFCFERFEVGVWSSRT 246

Query: 555 RK 556
           R+
Sbjct: 247 RR 248

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356568774|ref|XP_003552585.1| PREDICTED: uncharacterized FCP1 homology domain-containing protein C1271.03c-like isoform 2 [Glycine max]

 Score = 88.2 bits (217), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 42/72 (58%), Positives = 52/72 (72%), Gaps = 3/72 (4%)

Query: 485 PGNVCIGHSKKKLLVLDLNGLLVDIVASPYHRYRPDKMVSNKAVFKRPCCDEFLSFCFER 544
           P  VC+   KKKL++LDLNGLLVDIV+ P    +PD MV  KA+FKRP   EFL+FCFE+
Sbjct: 39  PSIVCL---KKKLIILDLNGLLVDIVSPPPKYRKPDAMVGKKAMFKRPFYLEFLNFCFEK 95

Query: 545 FNVGVWSRGSRK 556
           F V VWS  ++K
Sbjct: 96  FEVAVWSSRTKK 107

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255547163|ref|XP_002514639.1| conserved hypothetical protein [Ricinus communis] gi|223546243|gb|EEF47745.1| conserved hypothetical protein [Ricinus communis]

 Score = 85.5 bits (210), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 36/62 (58%), Positives = 49/62 (79%)

Query: 495 KKLLVLDLNGLLVDIVASPYHRYRPDKMVSNKAVFKRPCCDEFLSFCFERFNVGVWSRGS 554
           KKLL+LD+NGLLVDI+   +   + D  +S+K+VFKRP CD+FL FCF++FNVGVWS  +
Sbjct: 347 KKLLILDVNGLLVDILPYGHISNKADITISHKSVFKRPFCDDFLQFCFKKFNVGVWSSRT 406

Query: 555 RK 556
           +K
Sbjct: 407 KK 408

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224080213|ref|XP_002306055.1| predicted protein [Populus trichocarpa] gi|222849019|gb|EEE86566.1| predicted protein [Populus trichocarpa]

 Score = 83.6 bits (205), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 37/63 (58%), Positives = 49/63 (77%)

Query: 494 KKKLLVLDLNGLLVDIVASPYHRYRPDKMVSNKAVFKRPCCDEFLSFCFERFNVGVWSRG 553
           +KKLL+LD+NG+LVDIV++P   +  D  ++ KAVF+RP C +FL FCFERF VGVWS  
Sbjct: 1   RKKLLILDINGVLVDIVSAPPKGHIADIKIAKKAVFRRPFCFDFLKFCFERFEVGVWSSR 60

Query: 554 SRK 556
           +RK
Sbjct: 61  TRK 63

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357450991|ref|XP_003595772.1| hypothetical protein MTR_2g060670 [Medicago truncatula] gi|355484820|gb|AES66023.1| hypothetical protein MTR_2g060670 [Medicago truncatula]

 Score = 83.2 bits (204), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 79/264 (29%), Positives = 124/264 (46%), Gaps = 49/264 (18%)

Query: 319 NRSLMENDDVHPESHPVSSETRTIIAYKRKKRVKTYIWTKKKKCSNLLVNGVDCIKE--- 375
           N+SL  N+D   E H +S ++  I  Y RK                  +N V CIKE   
Sbjct: 307 NKSLTMNNDEDLEVHDLSDKSDCIKTYSRKN-----------------LNNVHCIKEPPI 349

Query: 376 ----DGDSLMKNVSLLTEGHIEQKLSD-------KLDKIQITVHDASHGNDVSD----EI 420
               + DS   +   LT+G +E++          + +++++T  ++S     +     +I
Sbjct: 350 QDHHNDDSHEVSDGPLTDGLMERETEHSTNQNKVEAEEMELTAENSSEQRSTTTSCLVDI 409

Query: 421 PSHP-KEYNISGHDRSCKLPKKQHVEVETKTTEGFPPSHL------GVVESGTGLHDSSE 473
           P  P +E N S  D +       + E+   + E  P S L       +VE+     D +E
Sbjct: 410 PVTPLQEINASQVDHAEVTRNGGNSEISQCSVE-RPTSCLVDIPVTPLVETNARQVDHAE 468

Query: 474 EE---NHSQTLQYPPGNVCIGHSKKKLLVLDLNGLLVDIVA---SPYHRYRPDKMVSNKA 527
                 +S+  Q       I +SK KLL+LD+NGLL D V+   + Y++  PD  V  + 
Sbjct: 469 ATRNGGNSKISQCSVERPIISNSKNKLLILDVNGLLADCVSDVPNGYYQPEPDFWVRRRK 528

Query: 528 VFKRPCCDEFLSFCFERFNVGVWS 551
           V+KRP CD+FL FCF+RF+VG+WS
Sbjct: 529 VYKRPFCDDFLRFCFDRFHVGIWS 552

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|334186930|ref|NP_194349.2| haloacid dehalogenase-like hydrolase domain-containing protein [Arabidopsis thaliana] gi|332659768|gb|AEE85168.1| haloacid dehalogenase-like hydrolase domain-containing protein [Arabidopsis thaliana]

 Score = 78.6 bits (192), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 33/73 (45%), Positives = 45/73 (61%), Gaps = 2/73 (2%)

Query: 485 PGNVCIGHSKKKLLVLDLNGLLVDIVASPYHRYRPDKMVSNKAVFKRPCCDEFLSFCFER 544
           P   C     +KL++ DLNG+L DIV      + PD  VS ++VF+RP    FL FCFER
Sbjct: 833 PRCTCKAQRTRKLVIFDLNGILADIVQGFTGTFLPDGKVSYRSVFRRPFLPSFLDFCFER 892

Query: 545 FNVGVWSRGSRKI 557
           F+V +WS  SR++
Sbjct: 893 FDVAIWS--SRRV 903

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	560
TAIR|locus:2091823	465	AT3G29760 "AT3G29760" [Arabido	0.080	0.096	0.489	4.2e-06

TAIR|locus:2091823 AT3G29760 "AT3G29760" [Arabidopsis thaliana (taxid:3702)]

 Score = 128 (50.1 bits), Expect = 4.2e-06, Sum P(2) = 4.2e-06
 Identities = 23/47 (48%), Positives = 31/47 (65%)

Query:   510 VASPYHRYRPDKMVSNKAVFKRPCCDEFLSFCFERFNVGVWSRGSRK 556
             + +P      D  +  +A+FKRP CDEFL FCF++F VG+WS  SRK
Sbjct:   320 IVTPLKDVPADINIGRRAIFKRPFCDEFLRFCFDKFEVGIWS--SRK 364

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

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Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

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Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: GSVIVG00000035001 SubName- Full=Chromosome chr17 scaffold_101, whole genome shotgun sequence; (652 aa) (Vitis vinifera)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	560
smart00577	148	smart00577, CPDc, catalytic domain of ctd-like pho	1e-09
pfam03031	153	pfam03031, NIF, NLI interacting factor-like phosph	2e-08
TIGR02245	195	TIGR02245, HAD_IIID1, HAD-superfamily subfamily II	0.004

>gnl|CDD|214729 smart00577, CPDc, catalytic domain of ctd-like phosphatases

 Score = 56.5 bits (137), Expect = 1e-09
 Identities = 26/72 (36%), Positives = 31/72 (43%), Gaps = 9/72 (12%)

Query: 494 KKKLLVLDLNGLLVD-IVASPYHRYRPDKMVSNKA--------VFKRPCCDEFLSFCFER 544
           KKK LVLDL+  LV     S       D +V            V KRP  DEFL    E 
Sbjct: 1   KKKTLVLDLDETLVHSTHRSFKEWTNRDFIVPVLIDGHPHGVYVKKRPGVDEFLKRASEL 60

Query: 545 FNVGVWSRGSRK 556
           F + V++ G R 
Sbjct: 61  FELVVFTAGLRM 72

Length = 148

>gnl|CDD|217328 pfam03031, NIF, NLI interacting factor-like phosphatase

 Score = 53.4 bits (129), Expect = 2e-08
 Identities = 18/62 (29%), Positives = 30/62 (48%), Gaps = 1/62 (1%)

Query: 496 KLLVLDLNGLLVDIVASPYHRYRPDKMVSNKA-VFKRPCCDEFLSFCFERFNVGVWSRGS 554
           K LVLDL+  LV     P   +      ++   V KRP  DEFL    + + + +++  S
Sbjct: 1   KTLVLDLDETLVHSSFEPDLPFDFVLNFNHGVYVKKRPGLDEFLQELSKYYEIVIFTASS 60

Query: 555 RK 556
           ++
Sbjct: 61  KE 62

This family contains a number of NLI interacting factor isoforms and also an N-terminal regions of RNA polymerase II CTC phosphatase and FCP1 serine phosphatase. This region has been identified as the minimal phosphatase domain. Length = 153

>gnl|CDD|131299 TIGR02245, HAD_IIID1, HAD-superfamily subfamily IIID hydrolase, TIGR02245

 Score = 38.6 bits (90), Expect = 0.004
 Identities = 22/62 (35%), Positives = 31/62 (50%), Gaps = 10/62 (16%)

Query: 495 KKLLVLDLNGLLVDIVASPYHRYRPDKMVSNKAVFKRPCCDEFLSFCFERFNVGVWSRGS 554
           KKLLVLD++  L D      HR  P +         RP   EFL+  +E +++ +WS  S
Sbjct: 21  KKLLVLDIDYTLFD------HR-SPAETGEE---LMRPYLHEFLTSAYEDYDIVIWSATS 70

Query: 555 RK 556
            K
Sbjct: 71  MK 72

This family of sequences appears to belong to the Haloacid Dehalogenase (HAD) superfamily of enzymes by virtue of the presence of three catalytic domains , in this case: LLVLD(ILV)D(YH)T, I(VMG)IWS, and (DN)(VC)K(PA)Lx{15-17}T(IL)(MH)(FV)DD(IL)(GRS)(RK)N. Since this family has no large "cap" domain between motifs 1 and 2 or between 2 and 3, it is formally a "class III" HAD. Length = 195

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	560
TIGR02245	195	HAD_IIID1 HAD-superfamily subfamily IIID hydrolase	99.71
TIGR02251	162	HIF-SF_euk Dullard-like phosphatase domain. This d	99.62
PF03031	159	NIF: NLI interacting factor-like phosphatase; Inte	99.59
KOG1605	262	consensus TFIIF-interacting CTD phosphatase, inclu	99.48
TIGR02250	156	FCP1_euk FCP1-like phosphatase, phosphatase domain	99.33
smart00577	148	CPDc catalytic domain of ctd-like phosphatases.	99.25
COG5190	390	FCP1 TFIIF-interacting CTD phosphatases, including	98.55
KOG2832	393	consensus TFIIF-interacting CTD phosphatase, inclu	97.94
TIGR01681	128	HAD-SF-IIIC HAD-superfamily phosphatase, subfamily	97.39
KOG0323	635	consensus TFIIF-interacting CTD phosphatases, incl	97.13
cd01427	139	HAD_like Haloacid dehalogenase-like hydrolases. Th	97.04
TIGR01684	301	viral_ppase viral phosphatase. These proteins also	96.88
COG4996	164	Predicted phosphatase [General function prediction	96.82
PHA03398	303	viral phosphatase superfamily protein; Provisional	96.61
TIGR01662	132	HAD-SF-IIIA HAD-superfamily hydrolase, subfamily I	96.33
TIGR01685	174	MDP-1 magnesium-dependent phosphatase-1. This mode	96.07
TIGR01656	147	Histidinol-ppas histidinol-phosphate phosphatase f	95.97
PF08645	159	PNK3P: Polynucleotide kinase 3 phosphatase; InterP	95.59
PRK08942	181	D,D-heptose 1,7-bisphosphate phosphatase; Validate	95.1
TIGR01689	126	EcbF-BcbF capsule biosynthesis phosphatase. Due to	95.06
TIGR01664	166	DNA-3'-Pase DNA 3'-phosphatase. The central phosph	94.84
PF12689	169	Acid_PPase: Acid Phosphatase; InterPro: IPR010036	94.74
TIGR01686	320	FkbH FkbH-like domain. The C-terminal portion of t	94.65
TIGR01533	266	lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) famil	94.52
TIGR01672	237	AphA HAD superfamily (subfamily IIIB) phosphatase,	94.42
PRK13582	205	thrH phosphoserine phosphatase; Provisional	93.65
PRK05446	354	imidazole glycerol-phosphate dehydratase/histidino	93.49
TIGR01261	161	hisB_Nterm histidinol-phosphatase. This model desc	93.19
TIGR01663	526	PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase	92.94
PLN02954	224	phosphoserine phosphatase	91.9
PRK11009	237	aphA acid phosphatase/phosphotransferase; Provisio	91.86
PF05152	297	DUF705: Protein of unknown function (DUF705); Inte	91.74
smart00775	157	LNS2 LNS2 domain. This domain is found in Saccharo	90.67
PHA02530	300	pseT polynucleotide kinase; Provisional	90.6
TIGR01670	154	YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-pho	90.32
PRK06769	173	hypothetical protein; Validated	89.93
TIGR01668	170	YqeG_hyp_ppase HAD superfamily (subfamily IIIA) ph	89.85
PRK10187	266	trehalose-6-phosphate phosphatase; Provisional	89.52
PHA02597	197	30.2 hypothetical protein; Provisional	89.19
COG1877	266	OtsB Trehalose-6-phosphatase [Carbohydrate transpo	89.12
PLN02645	311	phosphoglycolate phosphatase	89.06
PRK10725	188	fructose-1-P/6-phosphogluconate phosphatase; Provi	88.82
PF13344	101	Hydrolase_6: Haloacid dehalogenase-like hydrolase;	88.79
PRK11587	218	putative phosphatase; Provisional	87.6
TIGR02009	185	PGMB-YQAB-SF beta-phosphoglucomutase family hydrol	87.15
PLN02151	354	trehalose-phosphatase	87.05
TIGR03351	220	PhnX-like phosphonatase-like hydrolase. This clade	86.92
PRK13288	214	pyrophosphatase PpaX; Provisional	86.24
PLN02580	384	trehalose-phosphatase	86.14
PTZ00174	247	phosphomannomutase; Provisional	85.74
TIGR01548	197	HAD-SF-IA-hyp1 haloacid dehalogenase superfamily,	85.61
TIGR02253	221	CTE7 HAD superfamily (subfamily IA) hydrolase, TIG	85.55
TIGR02252	203	DREG-2 REG-2-like, HAD superfamily (subfamily IA)	85.26
PRK11590	211	hypothetical protein; Provisional	85.21
PRK10976	266	putative hydrolase; Provisional	84.77
PRK13226	229	phosphoglycolate phosphatase; Provisional	84.56
PRK01158	230	phosphoglycolate phosphatase; Provisional	84.47
PRK10530	272	pyridoxal phosphate (PLP) phosphatase; Provisional	84.46
TIGR01993	184	Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These	84.2
PRK13478	267	phosphonoacetaldehyde hydrolase; Provisional	84.07
PRK03669	271	mannosyl-3-phosphoglycerate phosphatase; Reviewed	83.98
PRK13223	272	phosphoglycolate phosphatase; Provisional	83.96
PLN02770	248	haloacid dehalogenase-like hydrolase family protei	83.85
TIGR01422	253	phosphonatase phosphonoacetaldehyde hydrolase. Thi	83.62
PRK10748	238	flavin mononucleotide phosphatase; Provisional	83.32
PRK10513	270	sugar phosphate phosphatase; Provisional	83.26
PLN03017	366	trehalose-phosphatase	83.08
PRK15126	272	thiamin pyrimidine pyrophosphate hydrolase; Provis	82.71
PLN03243	260	haloacid dehalogenase-like hydrolase; Provisional	82.4
TIGR02254	224	YjjG/YfnB HAD superfamily (subfamily IA) hydrolase	82.24
PRK13222	226	phosphoglycolate phosphatase; Provisional	82.05
PRK09449	224	dUMP phosphatase; Provisional	81.88
COG2503	274	Predicted secreted acid phosphatase [General funct	81.87
PRK08238	479	hypothetical protein; Validated	81.63
TIGR01990	185	bPGM beta-phosphoglucomutase. The enzyme from L. l	81.54
PRK14501	726	putative bifunctional trehalose-6-phosphate syntha	81.45
TIGR01487	215	SPP-like sucrose-phosphate phosphatase-like hydrol	81.39
TIGR01428	198	HAD_type_II 2-haloalkanoic acid dehalogenase, type	81.25
COG0546	220	Gph Predicted phosphatases [General function predi	81.04
TIGR01549	154	HAD-SF-IA-v1 haloacid dehalogenase superfamily, su	80.88
PRK10826	222	2-deoxyglucose-6-phosphatase; Provisional	80.75
PRK10563	221	6-phosphogluconate phosphatase; Provisional	80.7
PRK09484	183	3-deoxy-D-manno-octulosonate 8-phosphate phosphata	80.65
PRK14988	224	GMP/IMP nucleotidase; Provisional	80.65
TIGR01491	201	HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPa	80.63
TIGR01454	205	AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthes	80.11

>TIGR02245 HAD_IIID1 HAD-superfamily subfamily IIID hydrolase, TIGR02245

Probab=99.71  E-value=8.6e-18  Score=157.35  Aligned_cols=61  Identities=31%  Similarity=0.451  Sum_probs=52.0

Q ss_pred             CCCCCCCeEEEEecCcccccccCCCCCCCCCCeeeccceeEeCccHHHHHHHHHhccEEEEEccccccccc
Q 042646          489 CIGHSKKKLLVLDLNGLLVDIVASPYHRYRPDKMVSNKAVFKRPCCDEFLSFCFERFNVGVWSRGSRKIWT  559 (560)
Q Consensus       489 ~i~~~KKKLLVLDLDETLVHSSskpp~g~kPDfkV~~yyVyKRPhLDEFLdfVsE~FEVVVWTSS~~kYVd  559 (560)
                      ....++||||||||||||||+....          .++++++||||++||++|+++|||+||||++++||+
T Consensus        15 ~~~~~~kklLVLDLDeTLvh~~~~~----------~~~~~~kRP~l~eFL~~~~~~feIvVwTAa~~~ya~   75 (195)
T TIGR02245        15 NPPREGKKLLVLDIDYTLFDHRSPA----------ETGEELMRPYLHEFLTSAYEDYDIVIWSATSMKWIE   75 (195)
T ss_pred             CCCCCCCcEEEEeCCCceEcccccC----------CCceEEeCCCHHHHHHHHHhCCEEEEEecCCHHHHH
Confidence            4445689999999999999973211          135899999999999999999999999999999985

This family of sequences appears to belong to the Haloacid Dehalogenase (HAD) superfamily of enzymes by virtue of the presence of three catalytic domains, in this case: LLVLD(ILV)D(YH)T, I(VMG)IWS, and (DN)(VC)K(PA)Lx{15-17}T(IL)(MH)(FV)DD(IL)(GRS)(RK)N. Since this family has no large "cap" domain between motifs 1 and 2 or between 2 and 3, it is formally a "class III" HAD.

>TIGR02251 HIF-SF_euk Dullard-like phosphatase domain

Probab=99.62  E-value=4.7e-16  Score=138.53  Aligned_cols=64  Identities=30%  Similarity=0.335  Sum_probs=54.4

Q ss_pred             CeEEEEecCcccccccCCCCCCCCCCee--------eccceeEeCccHHHHHHHHHhccEEEEEccccccccc
Q 042646          495 KKLLVLDLNGLLVDIVASPYHRYRPDKM--------VSNKAVFKRPCCDEFLSFCFERFNVGVWSRGSRKIWT  559 (560)
Q Consensus       495 KKLLVLDLDETLVHSSskpp~g~kPDfk--------V~~yyVyKRPhLDEFLdfVsE~FEVVVWTSS~~kYVd  559 (560)
                      |++|||||||||||++..++.. ..|+.        ...+||++|||+++||+++.++|+|+||||+.+.||+
T Consensus         1 k~~lvlDLDeTLi~~~~~~~~~-~~~~~~~~~~~~~~~~~~v~~RPgl~eFL~~l~~~yei~I~Ts~~~~yA~   72 (162)
T TIGR02251         1 KKTLVLDLDETLVHSTFKMPKV-DADFKVPVLIDGKIIPVYVFKRPHVDEFLERVSKWYELVIFTASLEEYAD   72 (162)
T ss_pred             CcEEEEcCCCCcCCCCCCCCCC-CCceEEEEEecCcEEEEEEEECCCHHHHHHHHHhcCEEEEEcCCcHHHHH
Confidence            6899999999999998776431 23332        2468999999999999999999999999999999985

This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031.

>PF03031 NIF: NLI interacting factor-like phosphatase; InterPro: IPR004274 The function of this domain is unclear

Probab=99.59  E-value=1.1e-15  Score=131.80  Aligned_cols=62  Identities=32%  Similarity=0.359  Sum_probs=48.8

Q ss_pred             eEEEEecCcccccccCCCCCCCCCCe----eeccceeEeCccHHHHHHHHHhccEEEEEccccccccc
Q 042646          496 KLLVLDLNGLLVDIVASPYHRYRPDK----MVSNKAVFKRPCCDEFLSFCFERFNVGVWSRGSRKIWT  559 (560)
Q Consensus       496 KLLVLDLDETLVHSSskpp~g~kPDf----kV~~yyVyKRPhLDEFLdfVsE~FEVVVWTSS~~kYVd  559 (560)
                      |||||||||||||+......  ..|+    ....++|++|||+++||+++.++|+|+|||++++.|++
T Consensus         1 k~LVlDLD~TLv~~~~~~~~--~~~~~~~~~~~~~~v~~RP~l~~FL~~l~~~~ev~i~T~~~~~ya~   66 (159)
T PF03031_consen    1 KTLVLDLDGTLVHSSSKSPL--PYDFKIIDQRGGYYVKLRPGLDEFLEELSKHYEVVIWTSASEEYAE   66 (159)
T ss_dssp             EEEEEE-CTTTEEEESSTCT--T-SEEEETEEEEEEEEE-TTHHHHHHHHHHHCEEEEE-SS-HHHHH
T ss_pred             CEEEEeCCCcEEEEeecCCC--CcccceeccccceeEeeCchHHHHHHHHHHhceEEEEEeehhhhhh
Confidence            79999999999999866542  2233    34678999999999999999999999999999999974

It is found in proteins of diverse function including phosphatases some of which may be active in active in ternary elongation complexes and a number of NLI interacting factors. In the phospatases this domain is often present N-terminal to the BRCT domain (IPR001357 from INTERPRO).; GO: 0005515 protein binding; PDB: 3L0Y_A 2GHQ_A 3PGL_A 3L0C_B 1TA0_A 2GHT_A 3L0B_B 1T9Z_A 3QLE_A 2Q5E_E ....

>KOG1605 consensus TFIIF-interacting CTD phosphatase, including NLI-interacting factor (involved in RNA polymerase II regulation) [Transcription]

Probab=99.48  E-value=6.7e-15  Score=144.10  Aligned_cols=68  Identities=28%  Similarity=0.308  Sum_probs=56.6

Q ss_pred             CCCCeEEEEecCccccccc--CCCCC--C----CCCCeeeccceeEeCccHHHHHHHHHhccEEEEEccccccccc
Q 042646          492 HSKKKLLVLDLNGLLVDIV--ASPYH--R----YRPDKMVSNKAVFKRPCCDEFLSFCFERFNVGVWSRGSRKIWT  559 (560)
Q Consensus       492 ~~KKKLLVLDLDETLVHSS--skpp~--g----~kPDfkV~~yyVyKRPhLDEFLdfVsE~FEVVVWTSS~~kYVd  559 (560)
                      ..+||+|||||||||+|++  +++..  .    ...+...+.+||++|||+++||..+.+|||+|||||+.+.|++
T Consensus        86 ~~~kk~lVLDLDeTLvHss~~~~~~~~~d~~~~v~~~~~~~~~yV~kRP~vdeFL~~~s~~~e~v~FTAs~~~Ya~  161 (262)
T KOG1605|consen   86 TVGRKTLVLDLDETLVHSSLNLKPIVNADFTVPVEIDGHIHQVYVRKRPHVDEFLSRVSKWYELVLFTASLEVYAD  161 (262)
T ss_pred             cCCCceEEEeCCCcccccccccCCCCCcceeeeeeeCCcceEEEEEcCCCHHHHHHHhHHHHHHHHHHhhhHHHHH
Confidence            5689999999999999999  44422  1    1223334778999999999999999999999999999999985

>TIGR02250 FCP1_euk FCP1-like phosphatase, phosphatase domain

Probab=99.33  E-value=8.5e-13  Score=118.55  Aligned_cols=68  Identities=26%  Similarity=0.283  Sum_probs=54.2

Q ss_pred             CCCCeEEEEecCcccccccCCCCCCC-------C------CC---eee--ccceeEeCccHHHHHHHHHhccEEEEEccc
Q 042646          492 HSKKKLLVLDLNGLLVDIVASPYHRY-------R------PD---KMV--SNKAVFKRPCCDEFLSFCFERFNVGVWSRG  553 (560)
Q Consensus       492 ~~KKKLLVLDLDETLVHSSskpp~g~-------k------PD---fkV--~~yyVyKRPhLDEFLdfVsE~FEVVVWTSS  553 (560)
                      ..+|++|||||||||||+...+....       .      ++   |..  ..+++.+|||+.+||+++.++|+++|||++
T Consensus         3 ~~~kl~LVLDLDeTLihs~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~v~~rPgv~efL~~l~~~yel~I~T~~   82 (156)
T TIGR02250         3 REKKLHLVLDLDQTLIHTTKDPTLSEWEKYDIEEPNSETRRDLRKFNLGTMWYLTKLRPFLHEFLKEASKLYEMHVYTMG   82 (156)
T ss_pred             cCCceEEEEeCCCCcccccccCccchhhhcccccCCccccccceEEEcCCeEEEEEECCCHHHHHHHHHhhcEEEEEeCC
Confidence            35899999999999999987652210       0      11   111  346899999999999999999999999999


Q ss_pred             cccccc
Q 042646          554 SRKIWT  559 (560)
Q Consensus       554 ~~kYVd  559 (560)
                      .+.||+
T Consensus        83 ~~~yA~   88 (156)
T TIGR02250        83 TRAYAQ   88 (156)
T ss_pred             cHHHHH
Confidence            999985

This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the Pfam model pfam03031.

>smart00577 CPDc catalytic domain of ctd-like phosphatases

Probab=99.25  E-value=8.1e-12  Score=108.94  Aligned_cols=66  Identities=38%  Similarity=0.433  Sum_probs=52.5

Q ss_pred             CCeEEEEecCcccccccCCCC-CCCCCCeee--------ccceeEeCccHHHHHHHHHhccEEEEEccccccccc
Q 042646          494 KKKLLVLDLNGLLVDIVASPY-HRYRPDKMV--------SNKAVFKRPCCDEFLSFCFERFNVGVWSRGSRKIWT  559 (560)
Q Consensus       494 KKKLLVLDLDETLVHSSskpp-~g~kPDfkV--------~~yyVyKRPhLDEFLdfVsE~FEVVVWTSS~~kYVd  559 (560)
                      +|++|||||||||+|++.... +...+++.+        ..+++..|||+.+||+++.+.|.++|||++...|++
T Consensus         1 ~k~~lvldld~tl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~pG~~e~L~~L~~~~~l~I~Ts~~~~~~~   75 (148)
T smart00577        1 KKKTLVLDLDETLVHSTHRSFKEWTNRDFIVPVLIDGHPHGVYVKKRPGVDEFLKRASELFELVVFTAGLRMYAD   75 (148)
T ss_pred             CCcEEEEeCCCCeECCCCCcCCCCCccceEEEEEeCCceEEEEEEECCCHHHHHHHHHhccEEEEEeCCcHHHHH
Confidence            589999999999999864221 112233332        467899999999999999999999999999998875

>COG5190 FCP1 TFIIF-interacting CTD phosphatases, including NLI-interacting factor [Transcription]

Probab=98.55  E-value=5e-08  Score=100.95  Aligned_cols=76  Identities=24%  Similarity=0.130  Sum_probs=60.5

Q ss_pred             CCCCCCCCCCCCeEEEEecCcccccccCCCCCCC------CCCeeeccceeEeCccHHHHHHHHHhccEEEEEccccccc
Q 042646          484 PPGNVCIGHSKKKLLVLDLNGLLVDIVASPYHRY------RPDKMVSNKAVFKRPCCDEFLSFCFERFNVGVWSRGSRKI  557 (560)
Q Consensus       484 sP~r~~i~~~KKKLLVLDLDETLVHSSskpp~g~------kPDfkV~~yyVyKRPhLDEFLdfVsE~FEVVVWTSS~~kY  557 (560)
                      ++.........+++|+||||+||+|+++......      .-+...+.++|.+||+|+.||.+++++|+|++||++.+.|
T Consensus       201 l~~~~~~~~~~~k~L~l~lde~l~~S~~~~~~~~df~~~~e~~~~~~~~~v~kRp~l~~fl~~ls~~~~l~~ft~s~~~y  280 (390)
T COG5190         201 LEPPVSKSTSPKKTLVLDLDETLVHSSFRYITLLDFLVKVEISLLQHLVYVSKRPELDYFLGKLSKIHELVYFTASVKRY  280 (390)
T ss_pred             ccchhhcCCCCccccccCCCccceeeccccccccchhhccccccceeEEEEcCChHHHHHHhhhhhhEEEEEEecchhhh
Confidence            4445555666899999999999999987654311      1122337789999999999999999999999999999998


Q ss_pred             cc
Q 042646          558 WT  559 (560)
Q Consensus       558 Vd  559 (560)
                      ++
T Consensus       281 ~~  282 (390)
T COG5190         281 AD  282 (390)
T ss_pred             cc
Confidence            75

>KOG2832 consensus TFIIF-interacting CTD phosphatase, including NLI-interacting factor (involved in RNA polymerase II regulation) [Transcription]

Probab=97.94  E-value=1e-05  Score=84.24  Aligned_cols=62  Identities=24%  Similarity=0.148  Sum_probs=49.8

Q ss_pred             CCCCCCCCeEEEEecCcccccccCCCCCCCCCCeeeccceeEeCccHHHHHHHHHhccEEEEEcccccccc
Q 042646          488 VCIGHSKKKLLVLDLNGLLVDIVASPYHRYRPDKMVSNKAVFKRPCCDEFLSFCFERFNVGVWSRGSRKIW  558 (560)
Q Consensus       488 ~~i~~~KKKLLVLDLDETLVHSSskpp~g~kPDfkV~~yyVyKRPhLDEFLdfVsE~FEVVVWTSS~~kYV  558 (560)
                      .+...+.+.+|||||.++|||.-....         .+..+.+||++|.||..|...|||||||+.+.-++
T Consensus       182 ~pPy~Qp~yTLVleledvLVhpdws~~---------tGwRf~kRPgvD~FL~~~a~~yEIVi~sse~gmt~  243 (393)
T KOG2832|consen  182 PPPYEQPPYTLVLELEDVLVHPDWSYK---------TGWRFKKRPGVDYFLGHLAKYYEIVVYSSEQGMTV  243 (393)
T ss_pred             CCcccCCCceEEEEeeeeEeccchhhh---------cCceeccCchHHHHHHhhcccceEEEEecCCccch
Confidence            334445789999999999999532111         45678999999999999999999999999887655

>TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC

Probab=97.39  E-value=0.00012  Score=63.25  Aligned_cols=58  Identities=16%  Similarity=0.087  Sum_probs=39.9

Q ss_pred             eEEEEecCcccccccCCCCCCCCCCeeeccceeEeCccHHHHHHHHHhc-cEEEEEccc-ccccc
Q 042646          496 KLLVLDLNGLLVDIVASPYHRYRPDKMVSNKAVFKRPCCDEFLSFCFER-FNVGVWSRG-SRKIW  558 (560)
Q Consensus       496 KLLVLDLDETLVHSSskpp~g~kPDfkV~~yyVyKRPhLDEFLdfVsE~-FEVVVWTSS-~~kYV  558 (560)
                      |+||+|||||||+.-...   ...+..+.. . ...|++.++|+++.++ |.++|.|++ .++++
T Consensus         1 kli~~DlD~Tl~~~~~~~---~~~~~~~~~-~-~~~~gv~e~L~~Lk~~g~~l~i~Sn~~~~~~~   60 (128)
T TIGR01681         1 KVIVFDLDNTLWTGENIV---VGEDPIIDL-E-VTIKEIRDKLQTLKKNGFLLALASYNDDPHVA   60 (128)
T ss_pred             CEEEEeCCCCCCCCCccc---ccCCcchhh-H-HHHHHHHHHHHHHHHCCeEEEEEeCCCCHHHH
Confidence            689999999999863210   011110000 0 3579999999999875 999999999 66654

No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC.

>KOG0323 consensus TFIIF-interacting CTD phosphatases, including NLI-interacting factor [Transcription]

Probab=97.13  E-value=0.00021  Score=78.49  Aligned_cols=64  Identities=27%  Similarity=0.340  Sum_probs=49.3

Q ss_pred             eEEEEecCcccccccCCCCCC-------------------CCCCeee--ccceeEeCccHHHHHHHHHhccEEEEEcccc
Q 042646          496 KLLVLDLNGLLVDIVASPYHR-------------------YRPDKMV--SNKAVFKRPCCDEFLSFCFERFNVGVWSRGS  554 (560)
Q Consensus       496 KLLVLDLDETLVHSSskpp~g-------------------~kPDfkV--~~yyVyKRPhLDEFLdfVsE~FEVVVWTSS~  554 (560)
                      -.||+|||-||+|....+.-.                   +..+...  ..|||..|||+.+||+++.+.|++.|+|-+.
T Consensus       147 L~lv~Dld~tllh~~~~~~l~e~~~~l~~~~~~~~sn~dl~~~~~~~~~~~~~vKlRP~~~efL~~~sklfemhVyTmg~  226 (635)
T KOG0323|consen  147 LHLVLDLDHTLLHTILKSDLSETEKYLKEEAESVESNKDLFRFNPLGHDTEYLVKLRPFVHEFLKEANKLFEMHVYTMGT  226 (635)
T ss_pred             ceeehhhhhHHHHhhccchhhhhhhhcccccccccccccceeecccCCCceEEEEeCccHHHHHHHHHhhceeEEEeccc
Confidence            489999999999976432100                   0001001  3489999999999999999999999999999


Q ss_pred             ccccc
Q 042646          555 RKIWT  559 (560)
Q Consensus       555 ~kYVd  559 (560)
                      +.||.
T Consensus       227 R~YA~  231 (635)
T KOG0323|consen  227 RDYAL  231 (635)
T ss_pred             hHHHH
Confidence            99985

>cd01427 HAD_like Haloacid dehalogenase-like hydrolases

Probab=97.04  E-value=0.00061  Score=53.49  Aligned_cols=53  Identities=21%  Similarity=0.206  Sum_probs=40.7

Q ss_pred             EEEEecCcccccccCCCCCCCCCCeeeccceeEeCccHHHHHHHHHhc-cEEEEEcccccccc
Q 042646          497 LLVLDLNGLLVDIVASPYHRYRPDKMVSNKAVFKRPCCDEFLSFCFER-FNVGVWSRGSRKIW  558 (560)
Q Consensus       497 LLVLDLDETLVHSSskpp~g~kPDfkV~~yyVyKRPhLDEFLdfVsE~-FEVVVWTSS~~kYV  558 (560)
                      ++|||+||||+........         ...+..+|.+.+||+.+.++ +.++|.|++...++
T Consensus         1 ~~vfD~D~tl~~~~~~~~~---------~~~~~~~~~~~~~l~~l~~~g~~i~ivS~~~~~~~   54 (139)
T cd01427           1 AVLFDLDGTLLDSEPGIAE---------IEELELYPGVKEALKELKEKGIKLALATNKSRREV   54 (139)
T ss_pred             CeEEccCCceEccCccccc---------cccCCcCcCHHHHHHHHHHCCCeEEEEeCchHHHH
Confidence            5899999999886432110         22467899999999999987 99999999876543

The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.

>TIGR01684 viral_ppase viral phosphatase

Probab=96.88  E-value=0.00097  Score=67.93  Aligned_cols=50  Identities=26%  Similarity=0.307  Sum_probs=42.7

Q ss_pred             CCeEEEEecCcccccccCCCCCCCCCCeeeccceeEeC-ccHHHHHHHHHhc-cEEEEEcccccccc
Q 042646          494 KKKLLVLDLNGLLVDIVASPYHRYRPDKMVSNKAVFKR-PCCDEFLSFCFER-FNVGVWSRGSRKIW  558 (560)
Q Consensus       494 KKKLLVLDLDETLVHSSskpp~g~kPDfkV~~yyVyKR-PhLDEFLdfVsE~-FEVVVWTSS~~kYV  558 (560)
                      ..+++|+||||||+....               .|..| |++.++|+++.+. +.++|||++.+..+
T Consensus       125 ~~kvIvFDLDgTLi~~~~---------------~v~irdPgV~EaL~~LkekGikLaIaTS~~Re~v  176 (301)
T TIGR01684       125 PPHVVVFDLDSTLITDEE---------------PVRIRDPRIYDSLTELKKRGCILVLWSYGDRDHV  176 (301)
T ss_pred             cceEEEEecCCCCcCCCC---------------ccccCCHHHHHHHHHHHHCCCEEEEEECCCHHHH
Confidence            578999999999987631               25688 9999999999997 89999999887765

These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade.

>COG4996 Predicted phosphatase [General function prediction only]

Probab=96.82  E-value=0.002  Score=60.75  Aligned_cols=55  Identities=22%  Similarity=0.297  Sum_probs=40.6

Q ss_pred             EEEEecCccccc----ccCCCC-CCCCCCeee--ccceeEeCccHHHHHHHHHhc-cEEEEEc
Q 042646          497 LLVLDLNGLLVD----IVASPY-HRYRPDKMV--SNKAVFKRPCCDEFLSFCFER-FNVGVWS  551 (560)
Q Consensus       497 LLVLDLDETLVH----SSskpp-~g~kPDfkV--~~yyVyKRPhLDEFLdfVsE~-FEVVVWT  551 (560)
                      ++|||+|||||+    ++..|| ..+.++.+.  .+..|..|||+.+||+|+... |-|..+|
T Consensus         2 ~i~~d~d~t~wdhh~iSsl~pPf~rVs~n~i~Ds~G~ev~L~~~v~~~l~warnsG~i~~~~s   64 (164)
T COG4996           2 AIVFDADKTLWDHHNISSLEPPFRRVSSNTIEDSKGREVHLFPDVKETLKWARNSGYILGLAS   64 (164)
T ss_pred             cEEEeCCCcccccccchhcCCcceecCccceecCCCeEEEEcHHHHHHHHHHHhCCcEEEEee
Confidence            689999999997    344443 224566555  678999999999999999866 6554443

>PHA03398 viral phosphatase superfamily protein; Provisional

Probab=96.61  E-value=0.0021  Score=65.66  Aligned_cols=51  Identities=27%  Similarity=0.335  Sum_probs=42.9

Q ss_pred             CCCeEEEEecCcccccccCCCCCCCCCCeeeccceeEeC-ccHHHHHHHHHhc-cEEEEEcccccccc
Q 042646          493 SKKKLLVLDLNGLLVDIVASPYHRYRPDKMVSNKAVFKR-PCCDEFLSFCFER-FNVGVWSRGSRKIW  558 (560)
Q Consensus       493 ~KKKLLVLDLDETLVHSSskpp~g~kPDfkV~~yyVyKR-PhLDEFLdfVsE~-FEVVVWTSS~~kYV  558 (560)
                      ..++++|+||||||+....               .|..| |++.++|+++.+. +-++|||++.+.++
T Consensus       126 ~~~~~i~~D~D~TL~~~~~---------------~v~irdp~V~EtL~eLkekGikLaIvTNg~Re~v  178 (303)
T PHA03398        126 EIPHVIVFDLDSTLITDEE---------------PVRIRDPFVYDSLDELKERGCVLVLWSYGNREHV  178 (303)
T ss_pred             eeccEEEEecCCCccCCCC---------------ccccCChhHHHHHHHHHHCCCEEEEEcCCChHHH
Confidence            3579999999999998621               26688 9999999999987 89999999877655

>TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA

Probab=96.33  E-value=0.0038  Score=52.50  Aligned_cols=50  Identities=32%  Similarity=0.365  Sum_probs=37.0

Q ss_pred             eEEEEecCcccccccCCCCCCCCCCeeeccceeEeCccHHHHHHHHHhc-cEEEEEcccc
Q 042646          496 KLLVLDLNGLLVDIVASPYHRYRPDKMVSNKAVFKRPCCDEFLSFCFER-FNVGVWSRGS  554 (560)
Q Consensus       496 KLLVLDLDETLVHSSskpp~g~kPDfkV~~yyVyKRPhLDEFLdfVsE~-FEVVVWTSS~  554 (560)
                      |+|+||+||||++..  ...  .+     .......|++.++|+++.+. |.++|-|.+.
T Consensus         1 k~~~~D~dgtL~~~~--~~~--~~-----~~~~~~~~~v~~~l~~L~~~g~~l~i~Sn~~   51 (132)
T TIGR01662         1 KGVVLDLDGTLTDDV--PYV--DD-----EDERILYPEVPDALAELKEAGYKVVIVTNQS   51 (132)
T ss_pred             CEEEEeCCCceecCC--CCC--CC-----HHHheeCCCHHHHHHHHHHCCCEEEEEECCc
Confidence            689999999999741  110  11     11356789999999999766 9999999876

In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme.

>TIGR01685 MDP-1 magnesium-dependent phosphatase-1

Probab=96.07  E-value=0.011  Score=55.10  Aligned_cols=64  Identities=16%  Similarity=0.126  Sum_probs=44.5

Q ss_pred             CeEEEEecCcccccccCCCCCC-----CCCCe-ee---ccceeEeCccHHHHHHHHHhc-cEEEEEccc-ccccc
Q 042646          495 KKLLVLDLNGLLVDIVASPYHR-----YRPDK-MV---SNKAVFKRPCCDEFLSFCFER-FNVGVWSRG-SRKIW  558 (560)
Q Consensus       495 KKLLVLDLDETLVHSSskpp~g-----~kPDf-kV---~~yyVyKRPhLDEFLdfVsE~-FEVVVWTSS-~~kYV  558 (560)
                      .+|+|+|||+|||.-......+     ..++. .+   ..-.+..+|++.++|+++.+. +.++|-|++ ..+++
T Consensus         2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~pGv~elL~~Lk~~G~~l~I~Sn~~~~~~~   76 (174)
T TIGR01685         2 PRVIVFDLDGTLWDHYMISLLGGPFKPVKQNNSIIIDKSGTEVTLIKEVRDVLQTLKDAGTYLATASWNDVPEWA   76 (174)
T ss_pred             CcEEEEeCCCCCcCcccccccCCCceeccCCCCeEEeCCCCEEEEcccHHHHHHHHHHCCCEEEEEeCCCChHHH
Confidence            4799999999999754322110     12222 11   334678889999999999865 999999987 66554

This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues.

>TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain

Probab=95.97  E-value=0.011  Score=51.56  Aligned_cols=52  Identities=25%  Similarity=0.178  Sum_probs=38.6

Q ss_pred             eEEEEecCcccccccCCCCCCCCCCeeeccceeEeCccHHHHHHHHHhc-cEEEEEcccc
Q 042646          496 KLLVLDLNGLLVDIVASPYHRYRPDKMVSNKAVFKRPCCDEFLSFCFER-FNVGVWSRGS  554 (560)
Q Consensus       496 KLLVLDLDETLVHSSskpp~g~kPDfkV~~yyVyKRPhLDEFLdfVsE~-FEVVVWTSS~  554 (560)
                      ++|+||+||||+........   .    ..-.+...|++.++|+++.+. |.++|-|+..
T Consensus         1 ~~~~~d~dgtl~~~~~~~~~---~----~~~~~~~~~g~~~~l~~Lk~~g~~~~I~Sn~~   53 (147)
T TIGR01656         1 PALFLDRDGVINEDTVSDYP---R----SLDDWQLRPGAVPALLTLRAAGYTVVVVTNQS   53 (147)
T ss_pred             CeEEEeCCCceeccCCcccC---C----CHHHeEEcCChHHHHHHHHHCCCEEEEEeCCC
Confidence            57999999999986532211   1    111235689999999999866 9999999875

This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3.

>PF08645 PNK3P: Polynucleotide kinase 3 phosphatase; InterPro: IPR013954 Polynucleotide kinase 3 phosphatases play a role in the repair of single breaks in DNA induced by DNA-damaging agents such as gamma radiation and camptothecin []

Probab=95.59  E-value=0.024  Score=51.55  Aligned_cols=52  Identities=21%  Similarity=0.325  Sum_probs=35.0

Q ss_pred             eEEEEecCcccccccCCCCCCCCCCeeeccceeEeCccHHHHHHHHHhc-cEEEEEcc
Q 042646          496 KLLVLDLNGLLVDIVASPYHRYRPDKMVSNKAVFKRPCCDEFLSFCFER-FNVGVWSR  552 (560)
Q Consensus       496 KLLVLDLDETLVHSSskpp~g~kPDfkV~~yyVyKRPhLDEFLdfVsE~-FEVVVWTS  552 (560)
                      |++.|||||||+.......-...++-     +++.-|.+-+-|+.+.+. |.|||+|-
T Consensus         1 Kia~fD~DgTLi~~~s~~~f~~~~~D-----~~~~~~~v~~~L~~l~~~Gy~IvIvTN   53 (159)
T PF08645_consen    1 KIAFFDLDGTLIKTKSGKKFPKDPDD-----WKFFPPGVPEALRELHKKGYKIVIVTN   53 (159)
T ss_dssp             SEEEE-SCTTTEE-STSTTS-SSTCG-----GEEC-TTHHHHHHHHHHTTEEEEEEEE
T ss_pred             CEEEEeCCCCccCCCCCCcCcCCHHH-----hhhcchhHHHHHHHHHhcCCeEEEEeC
Confidence            68899999999986442211112222     467778899999999875 99999984

; PDB: 2FPW_A 2FPR_A 2FPX_A 2FPS_A 2FPU_B 3ZVM_A 1YJ5_A 3ZVL_A 3U7E_B 3U7G_A ....

>PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated

Probab=95.10  E-value=0.037  Score=49.50  Aligned_cols=52  Identities=21%  Similarity=0.206  Sum_probs=38.7

Q ss_pred             CeEEEEecCcccccccCCCCCCCCCCeeeccceeEeCccHHHHHHHHHhc-cEEEEEcccc
Q 042646          495 KKLLVLDLNGLLVDIVASPYHRYRPDKMVSNKAVFKRPCCDEFLSFCFER-FNVGVWSRGS  554 (560)
Q Consensus       495 KKLLVLDLDETLVHSSskpp~g~kPDfkV~~yyVyKRPhLDEFLdfVsE~-FEVVVWTSS~  554 (560)
                      .|+|+||+||||+-... .... ..      -.+...|++.++|+++.+. |.++|-|+..
T Consensus         3 ~~~~~~d~~~t~~~~~~-~~~~-~~------~~~~~~pgv~e~L~~Lk~~g~~l~I~Tn~~   55 (181)
T PRK08942          3 MKAIFLDRDGVINVDSD-GYVK-SP------DEWIPIPGSIEAIARLKQAGYRVVVATNQS   55 (181)
T ss_pred             ccEEEEECCCCcccCCc-cccC-CH------HHeEECCCHHHHHHHHHHCCCEEEEEeCCc
Confidence            68999999999976531 1110 01      1355789999999999987 9999999775

>TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase

Probab=95.06  E-value=0.035  Score=49.93  Aligned_cols=51  Identities=22%  Similarity=0.148  Sum_probs=34.7

Q ss_pred             eEEEEecCcccccccCCCCCCCCCCeeeccceeEeCccHHHHHHHHH-hccEEEEEccccccc
Q 042646          496 KLLVLDLNGLLVDIVASPYHRYRPDKMVSNKAVFKRPCCDEFLSFCF-ERFNVGVWSRGSRKI  557 (560)
Q Consensus       496 KLLVLDLDETLVHSSskpp~g~kPDfkV~~yyVyKRPhLDEFLdfVs-E~FEVVVWTSS~~kY  557 (560)
                      |++++||||||+.....+..           ..-..+.+.+.|+.+. +.+.|+++|+.....
T Consensus         2 K~i~~DiDGTL~~~~~~~y~-----------~~~~~~~~ie~L~~l~~~G~~IiiaTGR~~~~   53 (126)
T TIGR01689         2 KRLVMDLDNTITLTENGDYA-----------NVAPILAVIEKLRHYKALGFEIVISSSRNMRT   53 (126)
T ss_pred             CEEEEeCCCCcccCCCCccc-----------ccccCHHHHHHHHHHHHCCCEEEEECCCCchh
Confidence            68999999999764211110           0225567777787774 459999999987654

Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology.

>TIGR01664 DNA-3'-Pase DNA 3'-phosphatase

Probab=94.84  E-value=0.061  Score=48.96  Aligned_cols=56  Identities=16%  Similarity=0.231  Sum_probs=38.3

Q ss_pred             CCeEEEEecCcccccccCC-CCCCCCCCeeeccceeEeCccHHHHHHHHHh-ccEEEEEccccc
Q 042646          494 KKKLLVLDLNGLLVDIVAS-PYHRYRPDKMVSNKAVFKRPCCDEFLSFCFE-RFNVGVWSRGSR  555 (560)
Q Consensus       494 KKKLLVLDLDETLVHSSsk-pp~g~kPDfkV~~yyVyKRPhLDEFLdfVsE-~FEVVVWTSS~~  555 (560)
                      ..|+++||+||||+..... +.. ..|+-     ....-|++.++|+++.+ .|.++|-|+...
T Consensus        12 ~~k~~~~D~Dgtl~~~~~~~~~~-~~~~~-----~~~~~pgv~e~L~~Lk~~G~~l~I~TN~~~   69 (166)
T TIGR01664        12 QSKVAAFDLDGTLITTRSGKVFP-TSASD-----WRFLYPEIPAKLQELDDEGYKIVIFTNQSG   69 (166)
T ss_pred             cCcEEEEeCCCceEecCCCCccc-CChHH-----eEEecCCHHHHHHHHHHCCCEEEEEeCCcc
Confidence            5789999999999975321 111 11211     12245999999999975 599999998543

The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region.

>PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea

Probab=94.74  E-value=0.03  Score=52.51  Aligned_cols=64  Identities=27%  Similarity=0.205  Sum_probs=34.3

Q ss_pred             CCeEEEEecCcccccccCC----CC-CCCCCC-eee--ccceeEeCccHHHHHHHHHhc-cEEEEEccc-cccc
Q 042646          494 KKKLLVLDLNGLLVDIVAS----PY-HRYRPD-KMV--SNKAVFKRPCCDEFLSFCFER-FNVGVWSRG-SRKI  557 (560)
Q Consensus       494 KKKLLVLDLDETLVHSSsk----pp-~g~kPD-fkV--~~yyVyKRPhLDEFLdfVsE~-FEVVVWTSS-~~kY  557 (560)
                      -.||+|||||+|||.....    +| .....+ ..+  .+..|...|.+...|+++.++ ..++|=|.+ .+++
T Consensus         2 ~PklvvFDLD~TlW~~~~~~~~~~Pf~~~~~~~~v~D~~g~~v~lypdv~~iL~~L~~~gv~lavASRt~~P~~   75 (169)
T PF12689_consen    2 LPKLVVFDLDYTLWPPWMDTHVGPPFKKISNGNVVVDSRGEEVSLYPDVPEILQELKERGVKLAVASRTDEPDW   75 (169)
T ss_dssp             S-SEEEE-STTTSSSS-TTTSS-S-EEE-TTS--EEETT--EE---TTHHHHHHHHHHCT--EEEEE--S-HHH
T ss_pred             CCcEEEEcCcCCCCchhHhhccCCCceecCCCCEEEeCCCCEEEeCcCHHHHHHHHHHCCCEEEEEECCCChHH
Confidence            3689999999999975422    11 111122 222  667899999999999999975 788887743 3444

The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A.

>TIGR01686 FkbH FkbH-like domain

Probab=94.65  E-value=0.034  Score=54.75  Aligned_cols=58  Identities=21%  Similarity=0.123  Sum_probs=39.7

Q ss_pred             CCeEEEEecCcccccccCCCCCCCCCCeeecccee-EeCccHHHHHHHHHhc-cEEEEEcccccccc
Q 042646          494 KKKLLVLDLNGLLVDIVASPYHRYRPDKMVSNKAV-FKRPCCDEFLSFCFER-FNVGVWSRGSRKIW  558 (560)
Q Consensus       494 KKKLLVLDLDETLVHSSskpp~g~kPDfkV~~yyV-yKRPhLDEFLdfVsE~-FEVVVWTSS~~kYV  558 (560)
                      .+|+||||||+|||..+-..-      .. .++.+ -..|++.+||+.+.+. +.++|-|...+..|
T Consensus         2 ~~k~~v~DlDnTlw~gv~~e~------g~-~~i~~~~~~~~~~e~L~~L~~~Gi~lai~S~n~~~~a   61 (320)
T TIGR01686         2 ALKVLVLDLDNTLWGGVLGED------GI-DNLNLSPLHKTLQEKIKTLKKQGFLLALASKNDEDDA   61 (320)
T ss_pred             CeEEEEEcCCCCCCCCEEccC------Cc-cccccCccHHHHHHHHHHHHhCCCEEEEEcCCCHHHH
Confidence            589999999999997642211      00 01111 1367899999999866 88888888776544

The C-terminal portion of this domain is unique to this family (by BLAST).

>TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family

Probab=94.52  E-value=0.038  Score=54.92  Aligned_cols=65  Identities=22%  Similarity=0.250  Sum_probs=43.3

Q ss_pred             CCCeEEEEecCcccccccCC------CCCCCCCCe---eeccceeEeCccHHHHHHHHHhc-cEEEEEccccccc
Q 042646          493 SKKKLLVLDLNGLLVDIVAS------PYHRYRPDK---MVSNKAVFKRPCCDEFLSFCFER-FNVGVWSRGSRKI  557 (560)
Q Consensus       493 ~KKKLLVLDLDETLVHSSsk------pp~g~kPDf---kV~~yyVyKRPhLDEFLdfVsE~-FEVVVWTSS~~kY  557 (560)
                      .+++.+|||||||+++.+..      ....+.+..   -+.......-|++.+||+++.++ ..|+|.|.....+
T Consensus        73 ~kp~AVV~DIDeTvLdns~y~~~~~~~~~~~~~~~w~~wv~~~~a~~ipGA~e~L~~L~~~G~~v~iVTnR~~~~  147 (266)
T TIGR01533        73 DKKYAIVLDLDETVLDNSPYQGYQVLNNKPFDPETWDKWVQAAQAKPVAGALDFLNYANSKGVKIFYVSNRSEKE  147 (266)
T ss_pred             CCCCEEEEeCccccccChHHHHHHhcCCCcCCHHHHHHHHHcCCCCcCccHHHHHHHHHHCCCeEEEEeCCCcch
Confidence            36889999999999986521      111111110   01222445679999999999776 8899999977544

which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles.

>TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672

Probab=94.42  E-value=0.059  Score=52.54  Aligned_cols=61  Identities=8%  Similarity=0.105  Sum_probs=38.9

Q ss_pred             CCeEEEEecCcccccccCCCCCC---CCCC---e----eecc-----ceeEeCcc--HHHHHHHHHhc-cEEEEEcccc
Q 042646          494 KKKLLVLDLNGLLVDIVASPYHR---YRPD---K----MVSN-----KAVFKRPC--CDEFLSFCFER-FNVGVWSRGS  554 (560)
Q Consensus       494 KKKLLVLDLDETLVHSSskpp~g---~kPD---f----kV~~-----yyVyKRPh--LDEFLdfVsE~-FEVVVWTSS~  554 (560)
                      ++..++|||||||++++..-..+   +.+.   +    .+..     ..-...|+  ..+||+++.++ +.++|-|++.
T Consensus        62 ~p~aViFDlDgTLlDSs~~~~~G~~~~s~~~~~~l~g~~~w~~~~~~~~~~s~p~~~a~elL~~l~~~G~~i~iVTnr~  140 (237)
T TIGR01672        62 PPIAVSFDIDDTVLFSSPGFWRGKKTFSPGSEDYLKNQVFWEKVNNGWDEFSIPKEVARQLIDMHQRRGDAIFFVTGRT  140 (237)
T ss_pred             CCeEEEEeCCCccccCcHHHhCCcccCCHHHhhhhcChHHHHHHHHhcccCCcchhHHHHHHHHHHHCCCEEEEEeCCC
Confidence            44599999999999987510011   1111   0    1111     11233555  99999999887 8999999873

Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion.

>PRK13582 thrH phosphoserine phosphatase; Provisional

Probab=93.65  E-value=0.016  Score=51.55  Aligned_cols=33  Identities=27%  Similarity=0.249  Sum_probs=27.3

Q ss_pred             eeEeCccHHHHHHHHHhccEEEEEccccccccc
Q 042646          527 AVFKRPCCDEFLSFCFERFNVGVWSRGSRKIWT  559 (560)
Q Consensus       527 yVyKRPhLDEFLdfVsE~FEVVVWTSS~~kYVd  559 (560)
                      .+..+|++.+||+++.+.+.++|-|++...+++
T Consensus        66 ~~~~~pg~~e~L~~L~~~~~~~IvS~~~~~~~~   98 (205)
T PRK13582         66 TLDPLPGAVEFLDWLRERFQVVILSDTFYEFAG   98 (205)
T ss_pred             hCCCCCCHHHHHHHHHhcCCEEEEeCCcHHHHH
Confidence            344579999999999988999999998876653

>PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional

Probab=93.49  E-value=0.14  Score=52.93  Aligned_cols=54  Identities=15%  Similarity=0.157  Sum_probs=41.4

Q ss_pred             CCeEEEEecCcccccccCCCCCCCCCCeeeccceeEeCccHHHHHHHHHhc-cEEEEEccc
Q 042646          494 KKKLLVLDLNGLLVDIVASPYHRYRPDKMVSNKAVFKRPCCDEFLSFCFER-FNVGVWSRG  553 (560)
Q Consensus       494 KKKLLVLDLDETLVHSSskpp~g~kPDfkV~~yyVyKRPhLDEFLdfVsE~-FEVVVWTSS  553 (560)
                      ++|+|+||-||||+......+...      ....+..+|++.+||+++.+. |.++|-|..
T Consensus         1 ~~k~l~lDrDgtl~~~~~~~y~~~------~~~~~~l~pGV~e~L~~Lk~~G~kL~IvTNq   55 (354)
T PRK05446          1 MQKILFIDRDGTLIEEPPTDFQVD------SLDKLAFEPGVIPALLKLQKAGYKLVMVTNQ   55 (354)
T ss_pred             CCcEEEEeCCCCccCCCCcccccc------CcccceECcCHHHHHHHHHhCCCeEEEEECC
Confidence            479999999999999753222111      122578899999999999875 999999983

>TIGR01261 hisB_Nterm histidinol-phosphatase

Probab=93.19  E-value=0.16  Score=46.31  Aligned_cols=53  Identities=13%  Similarity=0.092  Sum_probs=38.7

Q ss_pred             CeEEEEecCcccccccCCCCCCCCCCeeeccceeEeCccHHHHHHHHHhc-cEEEEEccc
Q 042646          495 KKLLVLDLNGLLVDIVASPYHRYRPDKMVSNKAVFKRPCCDEFLSFCFER-FNVGVWSRG  553 (560)
Q Consensus       495 KKLLVLDLDETLVHSSskpp~g~kPDfkV~~yyVyKRPhLDEFLdfVsE~-FEVVVWTSS  553 (560)
                      .|.|.||.||||++..........+      -.+..-|++.++|+++.+. |.++|.|+.
T Consensus         1 ~~~~~~d~dg~l~~~~~~~~~~~~~------~~~~~~pgv~e~L~~L~~~g~~l~IvSN~   54 (161)
T TIGR01261         1 QKILFIDRDGTLIEEPPSDFQVDAL------EKLRFEKGVIPALLKLKKAGYKFVMVTNQ   54 (161)
T ss_pred             CCEEEEeCCCCccccCCCccccCCH------HHeeECCCHHHHHHHHHHCCCeEEEEeCC
Confidence            3689999999999953211110011      1466789999999999986 999999985

This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis.

>TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase

Probab=92.94  E-value=0.15  Score=55.22  Aligned_cols=57  Identities=18%  Similarity=0.261  Sum_probs=40.8

Q ss_pred             CCCeEEEEecCcccccccCC-CCCCCCCCeeeccceeEeCccHHHHHHHHHhc-cEEEEEccccc
Q 042646          493 SKKKLLVLDLNGLLVDIVAS-PYHRYRPDKMVSNKAVFKRPCCDEFLSFCFER-FNVGVWSRGSR  555 (560)
Q Consensus       493 ~KKKLLVLDLDETLVHSSsk-pp~g~kPDfkV~~yyVyKRPhLDEFLdfVsE~-FEVVVWTSS~~  555 (560)
                      +..|++.||+||||+...+. ... ..++.     +.+.-|++.+.|+.+.+. |.|+|+|.-..
T Consensus       166 ~~~Kia~fD~DGTLi~t~sg~~~~-~~~~d-----~~~l~pgV~e~L~~L~~~Gy~IvIvTNQ~g  224 (526)
T TIGR01663       166 GQEKIAGFDLDGTIIKTKSGKVFP-KGPDD-----WQIIFPEIPEKLKELEADGFKICIFTNQGG  224 (526)
T ss_pred             ccCcEEEEECCCCccccCCCccCC-CCHHH-----eeecccCHHHHHHHHHHCCCEEEEEECCcc
Confidence            46899999999999975322 111 11211     234569999999999876 99999998544

Note that the EC number for the kinase function is: 2.7.1.78

>PLN02954 phosphoserine phosphatase

Probab=91.90  E-value=0.091  Score=47.58  Aligned_cols=32  Identities=22%  Similarity=0.125  Sum_probs=26.6

Q ss_pred             eEeCccHHHHHHHHHhc-cEEEEEccccccccc
Q 042646          528 VFKRPCCDEFLSFCFER-FNVGVWSRGSRKIWT  559 (560)
Q Consensus       528 VyKRPhLDEFLdfVsE~-FEVVVWTSS~~kYVd  559 (560)
                      ...+|++.+||+++.+. +.++|-|++...++.
T Consensus        83 ~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~  115 (224)
T PLN02954         83 PRLSPGIPELVKKLRARGTDVYLVSGGFRQMIA  115 (224)
T ss_pred             CCCCccHHHHHHHHHHCCCEEEEECCCcHHHHH
Confidence            44679999999999876 899999999877653

>PRK11009 aphA acid phosphatase/phosphotransferase; Provisional

Probab=91.86  E-value=0.32  Score=47.68  Aligned_cols=61  Identities=8%  Similarity=0.141  Sum_probs=38.5

Q ss_pred             CCeEEEEecCcccccccCCCC---CCCCCC---e----ee-----ccceeEeCcc--HHHHHHHHHhc-cEEEEEcccc
Q 042646          494 KKKLLVLDLNGLLVDIVASPY---HRYRPD---K----MV-----SNKAVFKRPC--CDEFLSFCFER-FNVGVWSRGS  554 (560)
Q Consensus       494 KKKLLVLDLDETLVHSSskpp---~g~kPD---f----kV-----~~yyVyKRPh--LDEFLdfVsE~-FEVVVWTSS~  554 (560)
                      ++.-++||+|||+++++....   ..+.++   +    .+     .....+-+||  +.+||+++.++ +.|++-|+..
T Consensus        62 ~p~av~~DIDeTvldnsp~~~~~~~~f~~~~~~y~~~~~fw~~y~~~~~~~a~p~~Ga~elL~~L~~~G~~I~iVTnR~  140 (237)
T PRK11009         62 PPMAVGFDIDDTVLFSSPGFWRGKKTFSPGSEDYLKNQKFWEKMNNGWDEFSIPKEVARQLIDMHVKRGDSIYFITGRT  140 (237)
T ss_pred             CCcEEEEECcCccccCCchheeeeeccCCCcccccChHHHHHHHHhcccccCcchHHHHHHHHHHHHCCCeEEEEeCCC
Confidence            455999999999999753211   112221   1    11     1112345566  99999999655 8999999864

>PF05152 DUF705: Protein of unknown function (DUF705); InterPro: IPR007827 This family contains uncharacterised baculoviral proteins

Probab=91.74  E-value=0.23  Score=51.26  Aligned_cols=52  Identities=21%  Similarity=0.275  Sum_probs=40.3

Q ss_pred             CCeEEEEecCcccccccCCCCCCCCCCeeeccceeEeCccHHHHHHHHHhcc-EEEEEccccccccc
Q 042646          494 KKKLLVLDLNGLLVDIVASPYHRYRPDKMVSNKAVFKRPCCDEFLSFCFERF-NVGVWSRGSRKIWT  559 (560)
Q Consensus       494 KKKLLVLDLDETLVHSSskpp~g~kPDfkV~~yyVyKRPhLDEFLdfVsE~F-EVVVWTSS~~kYVd  559 (560)
                      .+..+|+|||.|||......              -..=|.+-+.|..+.+.+ -+++||.+.+++|.
T Consensus       121 ~phVIVfDlD~TLItd~~~v--------------~Ir~~~v~~sL~~Lk~~g~vLvLWSyG~~eHV~  173 (297)
T PF05152_consen  121 PPHVIVFDLDSTLITDEGDV--------------RIRDPAVYDSLRELKEQGCVLVLWSYGNREHVR  173 (297)
T ss_pred             CCcEEEEECCCcccccCCcc--------------ccCChHHHHHHHHHHHcCCEEEEecCCCHHHHH
Confidence            56699999999999764321              113378888999999887 78899999988763

>smart00775 LNS2 LNS2 domain

Probab=90.67  E-value=0.34  Score=44.00  Aligned_cols=51  Identities=6%  Similarity=0.165  Sum_probs=29.4

Q ss_pred             EEEEecCcccccccCC-CCCCCCCCeeeccceeEeCccHHHHHHHHHhc-cEEEEEcccc
Q 042646          497 LLVLDLNGLLVDIVAS-PYHRYRPDKMVSNKAVFKRPCCDEFLSFCFER-FNVGVWSRGS  554 (560)
Q Consensus       497 LLVLDLDETLVHSSsk-pp~g~kPDfkV~~yyVyKRPhLDEFLdfVsE~-FEVVVWTSS~  554 (560)
                      ++|+|+||||+.+... .....     ++.-  +..|+..++++.+.+. |.|++.|++.
T Consensus         1 iVisDIDGTL~~sd~~~~~~~~-----~~~~--~~~~~~~~a~~~l~~~G~~ivy~TGRp   53 (157)
T smart00775        1 IVISDIDGTITKSDVLGHVVPI-----IGKD--WTHPGVAKLYRDIQNNGYKILYLTARP   53 (157)
T ss_pred             CEEEecCCCCcccccccccccc-----cccC--cCCHHHHHHHHHHHHcCCeEEEEcCCc
Confidence            4799999999976421 10000     0000  2357777777777665 6666666654

This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance.

>PHA02530 pseT polynucleotide kinase; Provisional

Probab=90.60  E-value=0.41  Score=45.63  Aligned_cols=60  Identities=15%  Similarity=0.092  Sum_probs=43.0

Q ss_pred             CCeEEEEecCcccccccCCCCCCCCCCeeeccceeEeCccHHHHHHHHHhc-cEEEEEcccccccc
Q 042646          494 KKKLLVLDLNGLLVDIVASPYHRYRPDKMVSNKAVFKRPCCDEFLSFCFER-FNVGVWSRGSRKIW  558 (560)
Q Consensus       494 KKKLLVLDLDETLVHSSskpp~g~kPDfkV~~yyVyKRPhLDEFLdfVsE~-FEVVVWTSS~~kYV  558 (560)
                      +++++++|+||||+......+-  .+.   ........|++.+||+.+.+. +.++|.|+......
T Consensus       157 ~~~~~~~D~dgtl~~~~~~~~~--~~~---~~~~~~~~~~~~~~l~~l~~~g~~i~i~T~r~~~~~  217 (300)
T PHA02530        157 LPKAVIFDIDGTLAKMGGRSPY--DWT---KVKEDKPNPMVVELVKMYKAAGYEIIVVSGRDGVCE  217 (300)
T ss_pred             CCCEEEEECCCcCcCCCCCCcc--chh---hcccCCCChhHHHHHHHHHhCCCEEEEEeCCChhhH
Confidence            4689999999999986543211  111   111235689999999999877 89999999877654

>TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family

Probab=90.32  E-value=0.32  Score=43.30  Aligned_cols=56  Identities=23%  Similarity=0.292  Sum_probs=34.8

Q ss_pred             eEEEEecCcccccccCCCCCCCCCCeeeccceeEeCccHHHHHHHHHhc-cEEEEEcccccccc
Q 042646          496 KLLVLDLNGLLVDIVASPYHRYRPDKMVSNKAVFKRPCCDEFLSFCFER-FNVGVWSRGSRKIW  558 (560)
Q Consensus       496 KLLVLDLDETLVHSSskpp~g~kPDfkV~~yyVyKRPhLDEFLdfVsE~-FEVVVWTSS~~kYV  558 (560)
                      |+++||+||||+.-.-.    +.++...- .+++.+|+.  -|+++.+. +.++|-|+.....+
T Consensus         2 ~~~~~D~Dgtl~~~~~~----~~~~~~~~-~~~~~~~~~--~i~~Lk~~G~~i~IvTn~~~~~~   58 (154)
T TIGR01670         2 RLLILDVDGVLTDGKIY----YTNNGEEI-KAFNVRDGY--GIRCALKSGIEVAIITGRKAKLV   58 (154)
T ss_pred             eEEEEeCceeEEcCeEE----ECCCCcEE-EEEechhHH--HHHHHHHCCCEEEEEECCCCHHH
Confidence            68999999999962110    11121111 134666665  57777764 89999998876543

The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved.

>PRK06769 hypothetical protein; Validated

Probab=89.93  E-value=0.54  Score=42.65  Aligned_cols=50  Identities=8%  Similarity=0.028  Sum_probs=35.6

Q ss_pred             CeEEEEecCcccccccCCCCCCCCCCeeeccceeEeCccHHHHHHHHHhc-cEEEEEcccc
Q 042646          495 KKLLVLDLNGLLVDIVASPYHRYRPDKMVSNKAVFKRPCCDEFLSFCFER-FNVGVWSRGS  554 (560)
Q Consensus       495 KKLLVLDLDETLVHSSskpp~g~kPDfkV~~yyVyKRPhLDEFLdfVsE~-FEVVVWTSS~  554 (560)
                      =+.|+||+||||.--.         . ....-.+-..|++.++|+++.+. |.++|-|+..
T Consensus         4 ~~~~~~d~d~~~~~~~---------~-~~~~~~~~~~pgv~e~L~~Lk~~G~~l~I~Tn~~   54 (173)
T PRK06769          4 IQAIFIDRDGTIGGDT---------T-IHYPGSFTLFPFTKASLQKLKANHIKIFSFTNQP   54 (173)
T ss_pred             CcEEEEeCCCcccCCC---------C-CCCHHHeEECCCHHHHHHHHHHCCCEEEEEECCc
Confidence            4689999999994110         0 11111344679999999999876 8999999865

>TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668

Probab=89.85  E-value=0.46  Score=42.99  Aligned_cols=46  Identities=17%  Similarity=0.028  Sum_probs=37.2

Q ss_pred             CCCeEEEEecCcccccccCCCCCCCCCCeeeccceeEeCccHHHHHHHHHhc-cEEEEEcccc
Q 042646          493 SKKKLLVLDLNGLLVDIVASPYHRYRPDKMVSNKAVFKRPCCDEFLSFCFER-FNVGVWSRGS  554 (560)
Q Consensus       493 ~KKKLLVLDLDETLVHSSskpp~g~kPDfkV~~yyVyKRPhLDEFLdfVsE~-FEVVVWTSS~  554 (560)
                      .+-+++|+|+||||++...                ....|++.++|+++.+. +.++|.|...
T Consensus        23 ~~v~~vv~D~Dgtl~~~~~----------------~~~~pgv~e~L~~Lk~~g~~l~I~Sn~~   69 (170)
T TIGR01668        23 VGIKGVVLDKDNTLVYPDH----------------NEAYPALRDWIEELKAAGRKLLIVSNNA   69 (170)
T ss_pred             CCCCEEEEecCCccccCCC----------------CCcChhHHHHHHHHHHcCCEEEEEeCCc
Confidence            4678999999999987521                12458899999999877 8999999876

This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family.

>PRK10187 trehalose-6-phosphate phosphatase; Provisional

Probab=89.52  E-value=0.6  Score=45.38  Aligned_cols=18  Identities=28%  Similarity=0.447  Sum_probs=15.0

Q ss_pred             CCeEEEEecCcccccccC
Q 042646          494 KKKLLVLDLNGLLVDIVA  511 (560)
Q Consensus       494 KKKLLVLDLDETLVHSSs  511 (560)
                      .+.+|+|||||||+....
T Consensus        13 ~~~li~~D~DGTLl~~~~   30 (266)
T PRK10187         13 ANYAWFFDLDGTLAEIKP   30 (266)
T ss_pred             CCEEEEEecCCCCCCCCC
Confidence            368999999999998643

>PHA02597 30

Probab=89.19  E-value=0.19  Score=44.88  Aligned_cols=26  Identities=4%  Similarity=-0.136  Sum_probs=20.8

Q ss_pred             eEeCccHHHHHHHHHhccEEEEEccc
Q 042646          528 VFKRPCCDEFLSFCFERFNVGVWSRG  553 (560)
Q Consensus       528 VyKRPhLDEFLdfVsE~FEVVVWTSS  553 (560)
                      +...|++.++|+++.+.+.+++-|+.
T Consensus        73 ~~~~pG~~e~L~~L~~~~~~~i~Tn~   98 (197)
T PHA02597         73 LSAYDDALDVINKLKEDYDFVAVTAL   98 (197)
T ss_pred             ccCCCCHHHHHHHHHhcCCEEEEeCC
Confidence            55799999999999988876665554

2 hypothetical protein; Provisional

>COG1877 OtsB Trehalose-6-phosphatase [Carbohydrate transport and metabolism]

Probab=89.12  E-value=0.5  Score=47.49  Aligned_cols=55  Identities=27%  Similarity=0.242  Sum_probs=39.1

Q ss_pred             CCCCCCCCeEEEEecCcccccccCCCCCCCCCCeeeccceeEeCccHHHHHHHHHhccE--EEEEcccc
Q 042646          488 VCIGHSKKKLLVLDLNGLLVDIVASPYHRYRPDKMVSNKAVFKRPCCDEFLSFCFERFN--VGVWSRGS  554 (560)
Q Consensus       488 ~~i~~~KKKLLVLDLDETLVHSSskpp~g~kPDfkV~~yyVyKRPhLDEFLdfVsE~FE--VVVWTSS~  554 (560)
                      ......++.+++||.||||.+....|.            -++.=+.+.+-|..+...+.  |+|.|-..
T Consensus        11 ~~~~~a~~~~~~lDyDGTl~~i~~~p~------------~a~~~~~l~~lL~~Las~~~~~v~iiSGR~   67 (266)
T COG1877          11 EPYLNARKRLLFLDYDGTLTEIVPHPE------------AAVPDDRLLSLLQDLASDPRNVVAIISGRS   67 (266)
T ss_pred             cccccccceEEEEeccccccccccCcc------------ccCCCHHHHHHHHHHHhcCCCeEEEEeCCC
Confidence            344456899999999999999865443            23455677888888888877  55555443

>PLN02645 phosphoglycolate phosphatase

Probab=89.06  E-value=0.55  Score=46.41  Aligned_cols=43  Identities=12%  Similarity=0.087  Sum_probs=31.0

Q ss_pred             CCeEEEEecCcccccccCCCCCCCCCCeeeccceeEeCccHHHHHHHHHhc-cEEEEEcccc
Q 042646          494 KKKLLVLDLNGLLVDIVASPYHRYRPDKMVSNKAVFKRPCCDEFLSFCFER-FNVGVWSRGS  554 (560)
Q Consensus       494 KKKLLVLDLDETLVHSSskpp~g~kPDfkV~~yyVyKRPhLDEFLdfVsE~-FEVVVWTSS~  554 (560)
                      .-++++||+||||++...                ++  |+..++|+++.+. ..+++-|...
T Consensus        27 ~~~~~~~D~DGtl~~~~~----------------~~--~ga~e~l~~lr~~g~~~~~~TN~~   70 (311)
T PLN02645         27 SVETFIFDCDGVIWKGDK----------------LI--EGVPETLDMLRSMGKKLVFVTNNS   70 (311)
T ss_pred             hCCEEEEeCcCCeEeCCc----------------cC--cCHHHHHHHHHHCCCEEEEEeCCC
Confidence            467999999999998631                12  6777788777654 7777777655

>PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional

Probab=88.82  E-value=0.21  Score=43.83  Aligned_cols=27  Identities=19%  Similarity=0.058  Sum_probs=19.3

Q ss_pred             CccHHHHHHHHHhccEEEEEcccccccc
Q 042646          531 RPCCDEFLSFCFERFNVGVWSRGSRKIW  558 (560)
Q Consensus       531 RPhLDEFLdfVsE~FEVVVWTSS~~kYV  558 (560)
                      -|+ .++|.++.+.+.++|-|++...++
T Consensus        90 ~~~-~e~L~~L~~~~~l~I~T~~~~~~~  116 (188)
T PRK10725         90 LPL-IEVVKAWHGRRPMAVGTGSESAIA  116 (188)
T ss_pred             ccH-HHHHHHHHhCCCEEEEcCCchHHH
Confidence            354 367777777788888888876654

>PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A

Probab=88.79  E-value=0.87  Score=38.64  Aligned_cols=40  Identities=28%  Similarity=0.222  Sum_probs=31.1

Q ss_pred             EEEecCcccccccCCCCCCCCCCeeeccceeEeCccHHHHHHHHHhc-cEEEEEccccc
Q 042646          498 LVLDLNGLLVDIVASPYHRYRPDKMVSNKAVFKRPCCDEFLSFCFER-FNVGVWSRGSR  555 (560)
Q Consensus       498 LVLDLDETLVHSSskpp~g~kPDfkV~~yyVyKRPhLDEFLdfVsE~-FEVVVWTSS~~  555 (560)
                      ++|||||||++..                  ..=|+..+||+++.+. ..+++.|-+..
T Consensus         1 ~l~D~dGvl~~g~------------------~~ipga~e~l~~L~~~g~~~~~lTNns~   41 (101)
T PF13344_consen    1 FLFDLDGVLYNGN------------------EPIPGAVEALDALRERGKPVVFLTNNSS   41 (101)
T ss_dssp             EEEESTTTSEETT------------------EE-TTHHHHHHHHHHTTSEEEEEES-SS
T ss_pred             CEEeCccEeEeCC------------------CcCcCHHHHHHHHHHcCCCEEEEeCCCC
Confidence            5899999999852                  1348899999999886 88888887653

...

>PRK11587 putative phosphatase; Provisional

Probab=87.60  E-value=0.29  Score=44.83  Aligned_cols=30  Identities=13%  Similarity=0.123  Sum_probs=25.0

Q ss_pred             eEeCccHHHHHHHHHhc-cEEEEEccccccc
Q 042646          528 VFKRPCCDEFLSFCFER-FNVGVWSRGSRKI  557 (560)
Q Consensus       528 VyKRPhLDEFLdfVsE~-FEVVVWTSS~~kY  557 (560)
                      +...|++.+||+++.+. +.++|-|++...+
T Consensus        82 ~~~~pg~~e~L~~L~~~g~~~~ivTn~~~~~  112 (218)
T PRK11587         82 ITALPGAIALLNHLNKLGIPWAIVTSGSVPV  112 (218)
T ss_pred             ceeCcCHHHHHHHHHHcCCcEEEEcCCCchH
Confidence            45689999999999865 9999999987654

>TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase

Probab=87.15  E-value=0.29  Score=42.53  Aligned_cols=26  Identities=23%  Similarity=0.236  Sum_probs=22.2

Q ss_pred             eEeCccHHHHHHHHHhc-cEEEEEccc
Q 042646          528 VFKRPCCDEFLSFCFER-FNVGVWSRG  553 (560)
Q Consensus       528 VyKRPhLDEFLdfVsE~-FEVVVWTSS  553 (560)
                      +...|++.+||+++.+. |.++|-|++
T Consensus        87 ~~~~~g~~~~l~~l~~~g~~i~i~S~~  113 (185)
T TIGR02009        87 AEVLPGIENFLKRLKKKGIAVGLGSSS  113 (185)
T ss_pred             CCCCcCHHHHHHHHHHcCCeEEEEeCc
Confidence            56789999999999876 888888876

All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509).

>PLN02151 trehalose-phosphatase

Probab=87.05  E-value=0.64  Score=48.54  Aligned_cols=51  Identities=24%  Similarity=0.305  Sum_probs=34.4

Q ss_pred             CCCCeEEEEecCcccccccCCCCCCCCCCeeeccceeEeCccHHHHHHHHHhccEEEEEcccc
Q 042646          492 HSKKKLLVLDLNGLLVDIVASPYHRYRPDKMVSNKAVFKRPCCDEFLSFCFERFNVGVWSRGS  554 (560)
Q Consensus       492 ~~KKKLLVLDLDETLVHSSskpp~g~kPDfkV~~yyVyKRPhLDEFLdfVsE~FEVVVWTSS~  554 (560)
                      ..++.+|+||+||||+-....      |+      .++.-|.+.+-|+.+...|.|+|-|-..
T Consensus        95 ~~~~~ll~lDyDGTL~PIv~~------P~------~A~~~~~~~~aL~~La~~~~vaIvSGR~  145 (354)
T PLN02151         95 EGKQIVMFLDYDGTLSPIVDD------PD------RAFMSKKMRNTVRKLAKCFPTAIVSGRC  145 (354)
T ss_pred             cCCceEEEEecCccCCCCCCC------cc------cccCCHHHHHHHHHHhcCCCEEEEECCC
Confidence            346789999999999966532      22      2345566777777777667666666544

>TIGR03351 PhnX-like phosphonatase-like hydrolase

Probab=86.92  E-value=0.33  Score=43.91  Aligned_cols=31  Identities=13%  Similarity=0.004  Sum_probs=25.7

Q ss_pred             eEeCccHHHHHHHHHh-ccEEEEEcccccccc
Q 042646          528 VFKRPCCDEFLSFCFE-RFNVGVWSRGSRKIW  558 (560)
Q Consensus       528 VyKRPhLDEFLdfVsE-~FEVVVWTSS~~kYV  558 (560)
                      +...|++.+||+++.+ .|.++|-|++...++
T Consensus        86 ~~l~~G~~~~L~~L~~~g~~~~ivT~~~~~~~  117 (220)
T TIGR03351        86 PVALPGAEEAFRSLRSSGIKVALTTGFDRDTA  117 (220)
T ss_pred             CccCCCHHHHHHHHHHCCCEEEEEeCCchHHH
Confidence            3577999999999975 599999999887654

This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the

>PRK13288 pyrophosphatase PpaX; Provisional

Probab=86.24  E-value=0.4  Score=43.47  Aligned_cols=31  Identities=16%  Similarity=0.148  Sum_probs=25.8

Q ss_pred             eEeCccHHHHHHHHHhc-cEEEEEcccccccc
Q 042646          528 VFKRPCCDEFLSFCFER-FNVGVWSRGSRKIW  558 (560)
Q Consensus       528 VyKRPhLDEFLdfVsE~-FEVVVWTSS~~kYV  558 (560)
                      +...|++.+||+++.+. +.++|-|++...++
T Consensus        81 ~~~~~g~~~~l~~L~~~g~~~~i~S~~~~~~~  112 (214)
T PRK13288         81 VTEYETVYETLKTLKKQGYKLGIVTTKMRDTV  112 (214)
T ss_pred             cccCcCHHHHHHHHHHCCCeEEEEeCCCHHHH
Confidence            45679999999999865 89999999877654

>PLN02580 trehalose-phosphatase

Probab=86.14  E-value=0.75  Score=48.48  Aligned_cols=52  Identities=29%  Similarity=0.347  Sum_probs=39.2

Q ss_pred             CCCCeEEEEecCcccccccCCCCCCCCCCeeeccceeEeCccHHHHHHHHHhccEEEEEccccc
Q 042646          492 HSKKKLLVLDLNGLLVDIVASPYHRYRPDKMVSNKAVFKRPCCDEFLSFCFERFNVGVWSRGSR  555 (560)
Q Consensus       492 ~~KKKLLVLDLDETLVHSSskpp~g~kPDfkV~~yyVyKRPhLDEFLdfVsE~FEVVVWTSS~~  555 (560)
                      ..++.+|+||.||||+-....      |+      .++.=|.+.+-|+.+.++|-|+|-|-...
T Consensus       116 ~~k~~~LfLDyDGTLaPIv~~------Pd------~A~~s~~~~~aL~~La~~~~VAIVSGR~~  167 (384)
T PLN02580        116 KGKKIALFLDYDGTLSPIVDD------PD------RALMSDAMRSAVKNVAKYFPTAIISGRSR  167 (384)
T ss_pred             hcCCeEEEEecCCccCCCCCC------cc------cccCCHHHHHHHHHHhhCCCEEEEeCCCH
Confidence            347889999999999876532      33      35566788888888888888888876654

>PTZ00174 phosphomannomutase; Provisional

Probab=85.74  E-value=0.46  Score=45.07  Aligned_cols=18  Identities=33%  Similarity=0.569  Sum_probs=15.3

Q ss_pred             CCeEEEEecCcccccccC
Q 042646          494 KKKLLVLDLNGLLVDIVA  511 (560)
Q Consensus       494 KKKLLVLDLDETLVHSSs  511 (560)
                      ..||+++||||||++...
T Consensus         4 ~~klia~DlDGTLL~~~~   21 (247)
T PTZ00174          4 KKTILLFDVDGTLTKPRN   21 (247)
T ss_pred             CCeEEEEECcCCCcCCCC
Confidence            468999999999998643

>TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548

Probab=85.61  E-value=0.37  Score=43.37  Aligned_cols=26  Identities=15%  Similarity=-0.041  Sum_probs=21.1

Q ss_pred             cHHHHHHHHHhc-cEEEEEcccccccc
Q 042646          533 CCDEFLSFCFER-FNVGVWSRGSRKIW  558 (560)
Q Consensus       533 hLDEFLdfVsE~-FEVVVWTSS~~kYV  558 (560)
                      +..++|+++.+. +.++|-|++...++
T Consensus       110 ~~~~~L~~l~~~g~~~~i~T~~~~~~~  136 (197)
T TIGR01548       110 TPKGLLRELHRAPKGMAVVTGRPRKDA  136 (197)
T ss_pred             CHHHHHHHHHHcCCcEEEECCCCHHHH
Confidence            458999999865 99999999877655

All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's.

>TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253

Probab=85.55  E-value=0.44  Score=42.83  Aligned_cols=30  Identities=17%  Similarity=0.162  Sum_probs=25.7

Q ss_pred             eEeCccHHHHHHHHHhc-cEEEEEccccccc
Q 042646          528 VFKRPCCDEFLSFCFER-FNVGVWSRGSRKI  557 (560)
Q Consensus       528 VyKRPhLDEFLdfVsE~-FEVVVWTSS~~kY  557 (560)
                      +...|++.+||+++.++ +.++|.|++...+
T Consensus        93 ~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~  123 (221)
T TIGR02253        93 LRVYPGVRDTLMELRESGYRLGIITDGLPVK  123 (221)
T ss_pred             CCCCCCHHHHHHHHHHCCCEEEEEeCCchHH
Confidence            46789999999999887 9999999987654

This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549).

>TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase

Probab=85.26  E-value=0.43  Score=42.65  Aligned_cols=27  Identities=26%  Similarity=0.103  Sum_probs=22.4

Q ss_pred             EeCccHHHHHHHHHhc-cEEEEEccccc
Q 042646          529 FKRPCCDEFLSFCFER-FNVGVWSRGSR  555 (560)
Q Consensus       529 yKRPhLDEFLdfVsE~-FEVVVWTSS~~  555 (560)
                      ...|++.++|+++.+. |.++|-|++..
T Consensus       105 ~~~~g~~~~l~~L~~~g~~~~i~Sn~~~  132 (203)
T TIGR02252       105 QVYPDAIKLLKDLRERGLILGVISNFDS  132 (203)
T ss_pred             eeCcCHHHHHHHHHHCCCEEEEEeCCch
Confidence            3569999999999876 89999998654

Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes.

>PRK11590 hypothetical protein; Provisional

Probab=85.21  E-value=0.48  Score=43.83  Aligned_cols=32  Identities=16%  Similarity=0.201  Sum_probs=25.2

Q ss_pred             eEeCccHHHHH-HHHH-hccEEEEEccccccccc
Q 042646          528 VFKRPCCDEFL-SFCF-ERFNVGVWSRGSRKIWT  559 (560)
Q Consensus       528 VyKRPhLDEFL-dfVs-E~FEVVVWTSS~~kYVd  559 (560)
                      +..+|++.+.| +.+. +.+.|+|=|++...++.
T Consensus        94 ~~~~pga~e~L~~~l~~~G~~l~IvSas~~~~~~  127 (211)
T PRK11590         94 VTAFPVVQERLTTYLLSSDADVWLITGSPQPLVE  127 (211)
T ss_pred             CcCCccHHHHHHHHHHhCCCEEEEEeCCcHHHHH
Confidence            34589999999 4566 46999999999887653

>PRK10976 putative hydrolase; Provisional

Probab=84.77  E-value=0.49  Score=44.27  Aligned_cols=16  Identities=25%  Similarity=0.376  Sum_probs=13.9

Q ss_pred             CeEEEEecCccccccc
Q 042646          495 KKLLVLDLNGLLVDIV  510 (560)
Q Consensus       495 KKLLVLDLDETLVHSS  510 (560)
                      .||+++||||||++..
T Consensus         2 ikli~~DlDGTLl~~~   17 (266)
T PRK10976          2 YQVVASDLDGTLLSPD   17 (266)
T ss_pred             ceEEEEeCCCCCcCCC
Confidence            4899999999999753

>PRK13226 phosphoglycolate phosphatase; Provisional

Probab=84.56  E-value=0.45  Score=44.27  Aligned_cols=31  Identities=6%  Similarity=-0.169  Sum_probs=25.3

Q ss_pred             eEeCccHHHHHHHHHhc-cEEEEEcccccccc
Q 042646          528 VFKRPCCDEFLSFCFER-FNVGVWSRGSRKIW  558 (560)
Q Consensus       528 VyKRPhLDEFLdfVsE~-FEVVVWTSS~~kYV  558 (560)
                      +...|++.++|+++.+. +.++|-|++...++
T Consensus        94 ~~~~pg~~~~L~~L~~~g~~l~i~Tn~~~~~~  125 (229)
T PRK13226         94 SQLFDGVEGMLQRLECAGCVWGIVTNKPEYLA  125 (229)
T ss_pred             CeeCCCHHHHHHHHHHCCCeEEEECCCCHHHH
Confidence            56789999999999876 88889998765543

>PRK01158 phosphoglycolate phosphatase; Provisional

Probab=84.47  E-value=0.53  Score=42.75  Aligned_cols=16  Identities=25%  Similarity=0.482  Sum_probs=13.7

Q ss_pred             CeEEEEecCccccccc
Q 042646          495 KKLLVLDLNGLLVDIV  510 (560)
Q Consensus       495 KKLLVLDLDETLVHSS  510 (560)
                      .|++++||||||+...
T Consensus         3 ~kli~~DlDGTLl~~~   18 (230)
T PRK01158          3 IKAIAIDIDGTITDKD   18 (230)
T ss_pred             eeEEEEecCCCcCCCC
Confidence            4899999999999753

>PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional

Probab=84.46  E-value=0.54  Score=43.63  Aligned_cols=16  Identities=31%  Similarity=0.563  Sum_probs=13.9

Q ss_pred             CeEEEEecCccccccc
Q 042646          495 KKLLVLDLNGLLVDIV  510 (560)
Q Consensus       495 KKLLVLDLDETLVHSS  510 (560)
                      .||+++||||||++..
T Consensus         3 ~kli~~DlDGTLl~~~   18 (272)
T PRK10530          3 YRVIALDLDGTLLTPK   18 (272)
T ss_pred             ccEEEEeCCCceECCC
Confidence            5899999999999753

>TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase

Probab=84.20  E-value=0.54  Score=41.65  Aligned_cols=27  Identities=15%  Similarity=0.017  Sum_probs=21.6

Q ss_pred             eCccHHHHHHHHHhccEEEEEcccccccc
Q 042646          530 KRPCCDEFLSFCFERFNVGVWSRGSRKIW  558 (560)
Q Consensus       530 KRPhLDEFLdfVsE~FEVVVWTSS~~kYV  558 (560)
                      ..|++.++|+.+.  +.++|.|++...++
T Consensus        85 ~~~g~~~~L~~L~--~~~~i~Tn~~~~~~  111 (184)
T TIGR01993        85 PDPELRNLLLRLP--GRKIIFTNGDRAHA  111 (184)
T ss_pred             CCHHHHHHHHhCC--CCEEEEeCCCHHHH
Confidence            4688999999986  68899998876544

These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509).

>PRK13478 phosphonoacetaldehyde hydrolase; Provisional

Probab=84.07  E-value=0.52  Score=44.72  Aligned_cols=31  Identities=16%  Similarity=0.155  Sum_probs=24.9

Q ss_pred             eEeCccHHHHHHHHHhc-cEEEEEcccccccc
Q 042646          528 VFKRPCCDEFLSFCFER-FNVGVWSRGSRKIW  558 (560)
Q Consensus       528 VyKRPhLDEFLdfVsE~-FEVVVWTSS~~kYV  558 (560)
                      +...|++.++|+++.+. |.++|-|++...++
T Consensus       100 ~~~~pg~~elL~~L~~~g~~l~I~T~~~~~~~  131 (267)
T PRK13478        100 ATPIPGVLEVIAALRARGIKIGSTTGYTREMM  131 (267)
T ss_pred             CCCCCCHHHHHHHHHHCCCEEEEEcCCcHHHH
Confidence            34579999999999865 99999998876543

>PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed

Probab=83.98  E-value=0.7  Score=44.08  Aligned_cols=18  Identities=33%  Similarity=0.492  Sum_probs=15.6

Q ss_pred             CCCeEEEEecCccccccc
Q 042646          493 SKKKLLVLDLNGLLVDIV  510 (560)
Q Consensus       493 ~KKKLLVLDLDETLVHSS  510 (560)
                      +..+++++||||||++..
T Consensus         5 ~~~~lI~~DlDGTLL~~~   22 (271)
T PRK03669          5 QDPLLIFTDLDGTLLDSH   22 (271)
T ss_pred             CCCeEEEEeCccCCcCCC
Confidence            468999999999999853

>PRK13223 phosphoglycolate phosphatase; Provisional

Probab=83.96  E-value=0.61  Score=45.15  Aligned_cols=30  Identities=7%  Similarity=0.127  Sum_probs=24.7

Q ss_pred             EeCccHHHHHHHHHh-ccEEEEEcccccccc
Q 042646          529 FKRPCCDEFLSFCFE-RFNVGVWSRGSRKIW  558 (560)
Q Consensus       529 yKRPhLDEFLdfVsE-~FEVVVWTSS~~kYV  558 (560)
                      -.+|++.++|+++.+ .+.++|.|++...++
T Consensus       101 ~~~~g~~e~L~~Lk~~g~~l~ivTn~~~~~~  131 (272)
T PRK13223        101 VVYPGVRDTLKWLKKQGVEMALITNKPERFV  131 (272)
T ss_pred             ccCCCHHHHHHHHHHCCCeEEEEECCcHHHH
Confidence            468999999999986 499999998876543

>PLN02770 haloacid dehalogenase-like hydrolase family protein

Probab=83.85  E-value=0.52  Score=44.62  Aligned_cols=31  Identities=6%  Similarity=-0.033  Sum_probs=25.8

Q ss_pred             eEeCccHHHHHHHHHhc-cEEEEEcccccccc
Q 042646          528 VFKRPCCDEFLSFCFER-FNVGVWSRGSRKIW  558 (560)
Q Consensus       528 VyKRPhLDEFLdfVsE~-FEVVVWTSS~~kYV  558 (560)
                      +...|++.++|+++.+. |.++|-|++...++
T Consensus       107 ~~l~pgv~e~L~~L~~~g~~l~I~Tn~~~~~~  138 (248)
T PLN02770        107 LKPLNGLYKLKKWIEDRGLKRAAVTNAPRENA  138 (248)
T ss_pred             CCcCccHHHHHHHHHHcCCeEEEEeCCCHHHH
Confidence            44679999999999765 99999999887665

>TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase

Probab=83.62  E-value=0.58  Score=43.69  Aligned_cols=31  Identities=16%  Similarity=0.218  Sum_probs=25.2

Q ss_pred             eEeCccHHHHHHHHHhc-cEEEEEcccccccc
Q 042646          528 VFKRPCCDEFLSFCFER-FNVGVWSRGSRKIW  558 (560)
Q Consensus       528 VyKRPhLDEFLdfVsE~-FEVVVWTSS~~kYV  558 (560)
                      +...|++.+||+++.+. +.++|-|++...++
T Consensus        98 ~~~~pg~~e~L~~L~~~g~~l~IvT~~~~~~~  129 (253)
T TIGR01422        98 SSPIPGVIEVIAYLRARGIKIGSTTGYTREMM  129 (253)
T ss_pred             CccCCCHHHHHHHHHHCCCeEEEECCCcHHHH
Confidence            35679999999999876 89999998876554

This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent.

>PRK10748 flavin mononucleotide phosphatase; Provisional

Probab=83.32  E-value=0.56  Score=44.03  Aligned_cols=26  Identities=8%  Similarity=0.104  Sum_probs=21.9

Q ss_pred             eCccHHHHHHHHHhccEEEEEccccc
Q 042646          530 KRPCCDEFLSFCFERFNVGVWSRGSR  555 (560)
Q Consensus       530 KRPhLDEFLdfVsE~FEVVVWTSS~~  555 (560)
                      .-|++.++|+.+.+.|.++|-|++..
T Consensus       114 ~~~gv~~~L~~L~~~~~l~i~Tn~~~  139 (238)
T PRK10748        114 VPQATHDTLKQLAKKWPLVAITNGNA  139 (238)
T ss_pred             CCccHHHHHHHHHcCCCEEEEECCCc
Confidence            33889999999998899999998653

>PRK10513 sugar phosphate phosphatase; Provisional

Probab=83.26  E-value=0.61  Score=43.59  Aligned_cols=16  Identities=31%  Similarity=0.461  Sum_probs=14.0

Q ss_pred             CeEEEEecCccccccc
Q 042646          495 KKLLVLDLNGLLVDIV  510 (560)
Q Consensus       495 KKLLVLDLDETLVHSS  510 (560)
                      .|++++||||||++..
T Consensus         3 ~kli~~DlDGTLl~~~   18 (270)
T PRK10513          3 IKLIAIDMDGTLLLPD   18 (270)
T ss_pred             eEEEEEecCCcCcCCC
Confidence            5899999999999753

>PLN03017 trehalose-phosphatase

Probab=83.08  E-value=1.3  Score=46.59  Aligned_cols=19  Identities=37%  Similarity=0.600  Sum_probs=15.4

Q ss_pred             CCCCeEEEEecCccccccc
Q 042646          492 HSKKKLLVLDLNGLLVDIV  510 (560)
Q Consensus       492 ~~KKKLLVLDLDETLVHSS  510 (560)
                      ..++.+|+||+||||+-..
T Consensus       108 ~~k~~llflD~DGTL~Piv  126 (366)
T PLN03017        108 RGKQIVMFLDYDGTLSPIV  126 (366)
T ss_pred             cCCCeEEEEecCCcCcCCc
Confidence            3478899999999999544

>PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional

Probab=82.71  E-value=0.64  Score=43.87  Aligned_cols=16  Identities=25%  Similarity=0.407  Sum_probs=13.7

Q ss_pred             CeEEEEecCccccccc
Q 042646          495 KKLLVLDLNGLLVDIV  510 (560)
Q Consensus       495 KKLLVLDLDETLVHSS  510 (560)
                      .||+++||||||+...
T Consensus         2 ~kli~~DlDGTLl~~~   17 (272)
T PRK15126          2 ARLAAFDMDGTLLMPD   17 (272)
T ss_pred             ccEEEEeCCCcCcCCC
Confidence            4799999999999753

>PLN03243 haloacid dehalogenase-like hydrolase; Provisional

Probab=82.40  E-value=0.56  Score=45.62  Aligned_cols=31  Identities=23%  Similarity=0.237  Sum_probs=26.3

Q ss_pred             eEeCccHHHHHHHHHhc-cEEEEEcccccccc
Q 042646          528 VFKRPCCDEFLSFCFER-FNVGVWSRGSRKIW  558 (560)
Q Consensus       528 VyKRPhLDEFLdfVsE~-FEVVVWTSS~~kYV  558 (560)
                      +-.+|++.+||+++.++ |.++|-|++...++
T Consensus       108 ~~l~pg~~e~L~~L~~~g~~l~I~Tn~~~~~~  139 (260)
T PLN03243        108 YRLRPGSREFVQALKKHEIPIAVASTRPRRYL  139 (260)
T ss_pred             cccCCCHHHHHHHHHHCCCEEEEEeCcCHHHH
Confidence            33579999999999876 99999999987665

>TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254

Probab=82.24  E-value=0.65  Score=41.47  Aligned_cols=31  Identities=16%  Similarity=0.154  Sum_probs=26.3

Q ss_pred             eEeCccHHHHHHHHHhccEEEEEcccccccc
Q 042646          528 VFKRPCCDEFLSFCFERFNVGVWSRGSRKIW  558 (560)
Q Consensus       528 VyKRPhLDEFLdfVsE~FEVVVWTSS~~kYV  558 (560)
                      +..+|++.++|+++.+.|.++|-|++...++
T Consensus        96 ~~~~~g~~~~L~~l~~~~~~~i~Sn~~~~~~  126 (224)
T TIGR02254        96 HQLLPGAFELMENLQQKFRLYIVTNGVRETQ  126 (224)
T ss_pred             CeeCccHHHHHHHHHhcCcEEEEeCCchHHH
Confidence            5678999999999998899999998876553

This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases.

>PRK13222 phosphoglycolate phosphatase; Provisional

Probab=82.05  E-value=0.68  Score=41.55  Aligned_cols=31  Identities=13%  Similarity=0.032  Sum_probs=26.2

Q ss_pred             eEeCccHHHHHHHHHhc-cEEEEEcccccccc
Q 042646          528 VFKRPCCDEFLSFCFER-FNVGVWSRGSRKIW  558 (560)
Q Consensus       528 VyKRPhLDEFLdfVsE~-FEVVVWTSS~~kYV  558 (560)
                      ...+|++.+||+++.+. +.++|.|.+...++
T Consensus        92 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~  123 (226)
T PRK13222         92 SRLYPGVKETLAALKAAGYPLAVVTNKPTPFV  123 (226)
T ss_pred             CccCCCHHHHHHHHHHCCCeEEEEeCCCHHHH
Confidence            55889999999999865 89999998876654

>PRK09449 dUMP phosphatase; Provisional

Probab=81.88  E-value=0.68  Score=42.01  Aligned_cols=30  Identities=17%  Similarity=0.262  Sum_probs=25.3

Q ss_pred             eEeCccHHHHHHHHHhccEEEEEccccccc
Q 042646          528 VFKRPCCDEFLSFCFERFNVGVWSRGSRKI  557 (560)
Q Consensus       528 VyKRPhLDEFLdfVsE~FEVVVWTSS~~kY  557 (560)
                      +...|++.++|+++.+.|.++|-|++...+
T Consensus        94 ~~~~~g~~~~L~~L~~~~~~~i~Tn~~~~~  123 (224)
T PRK09449         94 CTPLPGAVELLNALRGKVKMGIITNGFTEL  123 (224)
T ss_pred             CccCccHHHHHHHHHhCCeEEEEeCCcHHH
Confidence            346799999999999889999999886654

>COG2503 Predicted secreted acid phosphatase [General function prediction only]

Probab=81.87  E-value=1.5  Score=45.03  Aligned_cols=61  Identities=26%  Similarity=0.309  Sum_probs=37.6

Q ss_pred             CCCeEEEEecCcccccccCCC------CCCCCCCe---eeccceeEeCccHHHHHHHHHhccEEEEEccc
Q 042646          493 SKKKLLVLDLNGLLVDIVASP------YHRYRPDK---MVSNKAVFKRPCCDEFLSFCFERFNVGVWSRG  553 (560)
Q Consensus       493 ~KKKLLVLDLDETLVHSSskp------p~g~kPDf---kV~~yyVyKRPhLDEFLdfVsE~FEVVVWTSS  553 (560)
                      .+++-+|||||||+++-+.-.      ..++.|..   -+....--.=|+.-+||.|+-++=-.|.|-|-
T Consensus        77 ~K~~aVvlDlDETvLdNs~Yqgy~v~nnk~f~pe~Wd~wV~a~~sk~vpGA~eFl~Yvn~~Gg~ifyiSN  146 (274)
T COG2503          77 GKKKAVVLDLDETVLDNSAYQGYQVLNNKGFTPETWDKWVQAKKSKAVPGAVEFLNYVNSNGGKIFYISN  146 (274)
T ss_pred             CCCceEEEecchHhhcCccccchhhhcCCCCCccchHHHHhhcccccCccHHHHHHHHHhcCcEEEEEec
Confidence            367799999999999965321      11233311   11111223459999999999988655555443

>PRK08238 hypothetical protein; Validated

Probab=81.63  E-value=1.6  Score=46.68  Aligned_cols=31  Identities=3%  Similarity=-0.128  Sum_probs=26.4

Q ss_pred             EeCccHHHHHHHHHhc-cEEEEEccccccccc
Q 042646          529 FKRPCCDEFLSFCFER-FNVGVWSRGSRKIWT  559 (560)
Q Consensus       529 yKRPhLDEFLdfVsE~-FEVVVWTSS~~kYVd  559 (560)
                      -.+|++.++|+.+.+. +.++|=|++.+.+++
T Consensus        72 p~~pga~e~L~~lk~~G~~v~LaTas~~~~a~  103 (479)
T PRK08238         72 PYNEEVLDYLRAERAAGRKLVLATASDERLAQ  103 (479)
T ss_pred             CCChhHHHHHHHHHHCCCEEEEEeCCCHHHHH
Confidence            3679999999999766 899999999888764

>TIGR01990 bPGM beta-phosphoglucomutase

Probab=81.54  E-value=0.64  Score=40.43  Aligned_cols=25  Identities=12%  Similarity=0.026  Sum_probs=20.4

Q ss_pred             EeCccHHHHHHHHHhc-cEEEEEccc
Q 042646          529 FKRPCCDEFLSFCFER-FNVGVWSRG  553 (560)
Q Consensus       529 yKRPhLDEFLdfVsE~-FEVVVWTSS  553 (560)
                      ...|++.+||+++.+. +.++|-|++
T Consensus        87 ~~~pg~~~~L~~L~~~g~~~~i~s~~  112 (185)
T TIGR01990        87 DVLPGIKNLLDDLKKNNIKIALASAS  112 (185)
T ss_pred             ccCccHHHHHHHHHHCCCeEEEEeCC
Confidence            4579999999999866 888887754

The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state.

>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional

Probab=81.45  E-value=1.5  Score=48.21  Aligned_cols=51  Identities=24%  Similarity=0.331  Sum_probs=30.2

Q ss_pred             CCCeEEEEecCcccccccCCCCCCCCCCeeeccceeEeCccHHHHHHHHHh--ccEEEEEccccc
Q 042646          493 SKKKLLVLDLNGLLVDIVASPYHRYRPDKMVSNKAVFKRPCCDEFLSFCFE--RFNVGVWSRGSR  555 (560)
Q Consensus       493 ~KKKLLVLDLDETLVHSSskpp~g~kPDfkV~~yyVyKRPhLDEFLdfVsE--~FEVVVWTSS~~  555 (560)
                      .+++||+||+||||+.....+..            ...-|.+.+.|+.+.+  ...|+|-|....
T Consensus       490 ~~~rLi~~D~DGTL~~~~~~~~~------------~~~~~~~~~~L~~L~~d~g~~V~ivSGR~~  542 (726)
T PRK14501        490 ASRRLLLLDYDGTLVPFAPDPEL------------AVPDKELRDLLRRLAADPNTDVAIISGRDR  542 (726)
T ss_pred             ccceEEEEecCccccCCCCCccc------------CCCCHHHHHHHHHHHcCCCCeEEEEeCCCH
Confidence            36899999999999975322211            1123445555666555  455666555543

>TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal

Probab=81.39  E-value=0.77  Score=41.90  Aligned_cols=14  Identities=36%  Similarity=0.738  Sum_probs=12.6

Q ss_pred             eEEEEecCcccccc
Q 042646          496 KLLVLDLNGLLVDI  509 (560)
Q Consensus       496 KLLVLDLDETLVHS  509 (560)
                      |++++||||||+..
T Consensus         2 k~v~~DlDGTLl~~   15 (215)
T TIGR01487         2 KLVAIDIDGTLTEP   15 (215)
T ss_pred             cEEEEecCCCcCCC
Confidence            69999999999964

TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases.

>TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II

Probab=81.25  E-value=0.76  Score=41.04  Aligned_cols=31  Identities=23%  Similarity=0.253  Sum_probs=25.8

Q ss_pred             eEeCccHHHHHHHHHhc-cEEEEEcccccccc
Q 042646          528 VFKRPCCDEFLSFCFER-FNVGVWSRGSRKIW  558 (560)
Q Consensus       528 VyKRPhLDEFLdfVsE~-FEVVVWTSS~~kYV  558 (560)
                      +...|++.+||+++.++ |.++|-|.+...++
T Consensus        91 ~~~~~~~~~~L~~L~~~g~~~~i~Sn~~~~~~  122 (198)
T TIGR01428        91 LPPHPDVPAGLRALKERGYRLAILSNGSPAML  122 (198)
T ss_pred             CCCCCCHHHHHHHHHHCCCeEEEEeCCCHHHH
Confidence            44579999999999987 99999998876543

Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related.

>COG0546 Gph Predicted phosphatases [General function prediction only]

Probab=81.04  E-value=0.81  Score=42.58  Aligned_cols=31  Identities=13%  Similarity=0.168  Sum_probs=24.9

Q ss_pred             eEeCccHHHHHHHHHhc-cEEEEEcccccccc
Q 042646          528 VFKRPCCDEFLSFCFER-FNVGVWSRGSRKIW  558 (560)
Q Consensus       528 VyKRPhLDEFLdfVsE~-FEVVVWTSS~~kYV  558 (560)
                      ...-|++.+.|.++.+. |.++|-|+.....+
T Consensus        88 ~~~~~gv~e~L~~L~~~g~~l~i~T~k~~~~~  119 (220)
T COG0546          88 SRLFPGVKELLAALKSAGYKLGIVTNKPEREL  119 (220)
T ss_pred             CccCCCHHHHHHHHHhCCCeEEEEeCCcHHHH
Confidence            35688999999999876 89999998766554

>TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E

Probab=80.88  E-value=0.67  Score=39.53  Aligned_cols=31  Identities=19%  Similarity=0.133  Sum_probs=24.8

Q ss_pred             eEeCccHHHHHHHHHhc-cEEEEEcccccccc
Q 042646          528 VFKRPCCDEFLSFCFER-FNVGVWSRGSRKIW  558 (560)
Q Consensus       528 VyKRPhLDEFLdfVsE~-FEVVVWTSS~~kYV  558 (560)
                      ....|++.+||+++.+. +.++|.|++.+..+
T Consensus        63 ~~~~~g~~e~l~~L~~~g~~~~i~T~~~~~~~   94 (154)
T TIGR01549        63 EAYIRGAADLLKRLKEAGIKLGIISNGSLRAQ   94 (154)
T ss_pred             heeccCHHHHHHHHHHCcCeEEEEeCCchHHH
Confidence            34469999999999655 89999999876654

HAD subfamilies caused by an overly broad single model.

>PRK10826 2-deoxyglucose-6-phosphatase; Provisional

Probab=80.75  E-value=0.82  Score=41.79  Aligned_cols=31  Identities=19%  Similarity=0.288  Sum_probs=25.0

Q ss_pred             eEeCccHHHHHHHHHhc-cEEEEEcccccccc
Q 042646          528 VFKRPCCDEFLSFCFER-FNVGVWSRGSRKIW  558 (560)
Q Consensus       528 VyKRPhLDEFLdfVsE~-FEVVVWTSS~~kYV  558 (560)
                      +...|++.++|+++.+. |.++|-|++...++
T Consensus        91 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~  122 (222)
T PRK10826         91 RPLLPGVREALALCKAQGLKIGLASASPLHML  122 (222)
T ss_pred             CCCCCCHHHHHHHHHHCCCeEEEEeCCcHHHH
Confidence            34668999999999865 99999999876553

>PRK10563 6-phosphogluconate phosphatase; Provisional

Probab=80.70  E-value=0.8  Score=41.59  Aligned_cols=29  Identities=14%  Similarity=0.004  Sum_probs=22.8

Q ss_pred             eEeCccHHHHHHHHHhccEEEEEcccccccc
Q 042646          528 VFKRPCCDEFLSFCFERFNVGVWSRGSRKIW  558 (560)
Q Consensus       528 VyKRPhLDEFLdfVsE~FEVVVWTSS~~kYV  558 (560)
                      +...|++.+||+.+.  +-++|-|++...++
T Consensus        87 ~~~~~gv~~~L~~L~--~~~~ivTn~~~~~~  115 (221)
T PRK10563         87 LEPIAGANALLESIT--VPMCVVSNGPVSKM  115 (221)
T ss_pred             CCcCCCHHHHHHHcC--CCEEEEeCCcHHHH
Confidence            345689999999983  88899998876654

>PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional

Probab=80.65  E-value=2.2  Score=39.13  Aligned_cols=16  Identities=31%  Similarity=0.611  Sum_probs=14.5

Q ss_pred             CCeEEEEecCcccccc
Q 042646          494 KKKLLVLDLNGLLVDI  509 (560)
Q Consensus       494 KKKLLVLDLDETLVHS  509 (560)
                      ..+++|+|+||||++.
T Consensus        20 ~ikli~~D~Dgtl~~~   35 (183)
T PRK09484         20 NIRLLICDVDGVFSDG   35 (183)
T ss_pred             CceEEEEcCCeeeecC
Confidence            5899999999999975

>PRK14988 GMP/IMP nucleotidase; Provisional

Probab=80.65  E-value=1.1  Score=42.10  Aligned_cols=31  Identities=10%  Similarity=-0.115  Sum_probs=26.0

Q ss_pred             eEeCccHHHHHHHHHhc-cEEEEEcccccccc
Q 042646          528 VFKRPCCDEFLSFCFER-FNVGVWSRGSRKIW  558 (560)
Q Consensus       528 VyKRPhLDEFLdfVsE~-FEVVVWTSS~~kYV  558 (560)
                      +...|++.++|+++.+. +-++|-|++...++
T Consensus        92 ~~~~~g~~e~L~~Lk~~g~~~~i~Tn~~~~~~  123 (224)
T PRK14988         92 AVLREDTVPFLEALKASGKRRILLTNAHPHNL  123 (224)
T ss_pred             CCcCCCHHHHHHHHHhCCCeEEEEeCcCHHHH
Confidence            34679999999999986 89999999877654

>TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal

Probab=80.63  E-value=0.92  Score=39.85  Aligned_cols=31  Identities=16%  Similarity=0.235  Sum_probs=26.1

Q ss_pred             eEeCccHHHHHHHHHhc-cEEEEEcccccccc
Q 042646          528 VFKRPCCDEFLSFCFER-FNVGVWSRGSRKIW  558 (560)
Q Consensus       528 VyKRPhLDEFLdfVsE~-FEVVVWTSS~~kYV  558 (560)
                      +..+|++.+||+++.+. +.++|-|++...++
T Consensus        79 ~~~~~g~~e~l~~l~~~g~~~~IvS~~~~~~~  110 (201)
T TIGR01491        79 ISLRDYAEELVRWLKEKGLKTAIVSGGIMCLA  110 (201)
T ss_pred             CCCCccHHHHHHHHHHCCCEEEEEeCCcHHHH
Confidence            45789999999999865 99999999876554

This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog.

>TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein

Probab=80.11  E-value=0.66  Score=41.79  Aligned_cols=31  Identities=16%  Similarity=-0.043  Sum_probs=25.6

Q ss_pred             eEeCccHHHHHHHHHhc-cEEEEEcccccccc
Q 042646          528 VFKRPCCDEFLSFCFER-FNVGVWSRGSRKIW  558 (560)
Q Consensus       528 VyKRPhLDEFLdfVsE~-FEVVVWTSS~~kYV  558 (560)
                      +...|++.++|+++.+. +.++|.|.+...++
T Consensus        74 ~~~~~g~~~~L~~L~~~g~~~~i~Sn~~~~~~  105 (205)
T TIGR01454        74 VEVFPGVPELLAELRADGVGTAIATGKSGPRA  105 (205)
T ss_pred             cccCCCHHHHHHHHHHCCCeEEEEeCCchHHH
Confidence            45689999999999765 99999998876654

The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	560
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	3e-09
3qle_A	204	TIM50P; chaperone, mitochondrion, preprotein trans	2e-06
3shq_A	320	UBLCP1; phosphatase, hydrolase; 1.96A {Drosophila	6e-05
2ght_A	181	Carboxy-terminal domain RNA polymerase II polypept	2e-04
2hhl_A	195	CTD small phosphatase-like protein; CTD phosphatas	3e-04

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 59.1 bits (142), Expect = 3e-09
 Identities = 78/579 (13%), Positives = 155/579 (26%), Gaps = 193/579 (33%)

Query: 1   MQDIPLKTNSCAESTIDISSNSDLIPESTVDNNSSLIEAQYNSGLAYLENKKK------V 54
           +QD+P    S  E  ID      +I      + +  +          L +K++      V
Sbjct: 38  VQDMPKSILSKEE--ID-----HIIMSKDAVSGTLRL-------FWTLLSKQEEMVQKFV 83

Query: 55  KG--QQN--------QNRDNAPTMDST--ESTVDVSSNPGLIEACDNSPLMRSGNKKNRK 102
           +   + N        +     P+M +       D   N       DN        K N  
Sbjct: 84  EEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQRDRLYN-------DNQVF----AKYNVS 132

Query: 103 RRRRKRKSSAPKTDNTDADLQEVTSKTMTAPFGMA------LVDMI--TKAVSETDPLEV 154
           R +       P      A L E+         G+       +   +  +  V      ++
Sbjct: 133 RLQ-------PYLKLRQA-LLELRPAKNVLIDGVLGSGKTWVALDVCLSYKVQCKMDFKI 184

Query: 155 -------EASGDTSLKPV---LAAAPKETNGSVDTSVKLDFPKNLSRSKRKRL-RRKLHK 203
                    S +T L+ +   L           D S  +    +  +++ +RL + K ++
Sbjct: 185 FWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYE 244

Query: 204 ESLHVLERDAKD----------C---ALAGDKSLKN--NMLQEKHSSLQPSVDICSQNE- 247
             L VL  + ++          C        K + +  +     H SL       + +E 
Sbjct: 245 NCLLVL-LNVQNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEV 303

Query: 248 -----LVVKQSNGD------------VCLF-----NGHNAFEN---------NGVIDLHM 276
                  +     D            + +      +G   ++N           +I+  +
Sbjct: 304 KSLLLKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSL 363

Query: 277 ANGKQLEKKEAKCAPKVTEL--DLTTMRKDFPISEK--------------QSSSSNSANR 320
                LE  E +      ++   L+       I                     +     
Sbjct: 364 ---NVLEPAEYR------KMFDRLSVFPPSAHIPTILLSLIWFDVIKSDVMVVVNKLHKY 414

Query: 321 SLMEND---------DVHPESHPVSSETRTIIAYKRKKRVKTYIWTKKKKCSNLLVNGVD 371
           SL+E            ++ E          +     +  V  Y   K     +L+   +D
Sbjct: 415 SLVEKQPKESTISIPSIYLELKVKLENEYAL----HRSIVDHYNIPKTFDSDDLIPPYLD 470

Query: 372 -------------CIKEDGDSLMKNVSLLTEGHIEQKL----------SDKLDKIQ---- 404
                            +  +L + V  L    +EQK+             L+ +Q    
Sbjct: 471 QYFYSHIGHHLKNIEHPERMTLFRMV-FLDFRFLEQKIRHDSTAWNASGSILNTLQQLKF 529

Query: 405 ----ITVHDASHG---NDVSDEIPSHPKEYNISGHDRSC 436
               I  +D  +    N + D +P    E N+     + 
Sbjct: 530 YKPYICDNDPKYERLVNAILDFLPKI--EENLICSKYTD 566

>3qle_A TIM50P; chaperone, mitochondrion, preprotein translocation; HET: 1PE; 1.83A {Saccharomyces cerevisiae EC1118} Length = 204

 Score = 48.1 bits (115), Expect = 2e-06
 Identities = 15/65 (23%), Positives = 25/65 (38%), Gaps = 9/65 (13%)

Query: 492 HSKKKLLVLDLNGLLVDIVASPYHRYRPDKMVSNKAVFKRPCCDEFLSFCFERFNVGVWS 551
           + +   LV+ L   LV    S  H +R           KRP  D FL +  + + + ++S
Sbjct: 31  YQRPLTLVITLEDFLVHSEWSQKHGWR---------TAKRPGADYFLGYLSQYYEIVLFS 81

Query: 552 RGSRK 556
                
Sbjct: 82  SNYMM 86

>3shq_A UBLCP1; phosphatase, hydrolase; 1.96A {Drosophila melanogaster} Length = 320

 Score = 44.4 bits (104), Expect = 6e-05
 Identities = 19/75 (25%), Positives = 29/75 (38%), Gaps = 10/75 (13%)

Query: 482 QYPPGNVCIGHSKKKLLVLDLNGLLVDIVASPYHRYRPDKMVSNKAVFKRPCCDEFLSFC 541
            Y    +      KKLLVLD++  L D                      RP   EFL+  
Sbjct: 127 DYKIKELAPPREGKKLLVLDIDYTLFD----------HRSPAETGTELMRPYLHEFLTSA 176

Query: 542 FERFNVGVWSRGSRK 556
           +E +++ +WS  S +
Sbjct: 177 YEDYDIVIWSATSMR 191

>2ght_A Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1; protein-peptide complex, HAD superfamily, hydrolase; HET: SEP; 1.80A {Homo sapiens} PDB: 2ghq_A* 3pgl_A* 1t9z_A* 1ta0_A* 3l0c_A 3l0y_A 3l0b_A* 2q5e_A Length = 181

 Score = 41.6 bits (98), Expect = 2e-04
 Identities = 19/66 (28%), Positives = 27/66 (40%), Gaps = 6/66 (9%)

Query: 492 HSKKKLLVLDLNGLLV------DIVASPYHRYRPDKMVSNKAVFKRPCCDEFLSFCFERF 545
            S K  +V++L+  LV         A        D +V    V KRP  DEFL    E F
Sbjct: 12  DSDKICVVINLDETLVHSSFKPVNNADFIIPVEIDGVVHQVYVLKRPHVDEFLQRMGELF 71

Query: 546 NVGVWS 551
              +++
Sbjct: 72  ECVLFT 77

>2hhl_A CTD small phosphatase-like protein; CTD phosphatase, keggins anion, structural genomics, PSI, protein structure initiative; HET: KEG; 2.10A {Homo sapiens} Length = 195

 Score = 41.2 bits (97), Expect = 3e-04
 Identities = 19/71 (26%), Positives = 27/71 (38%), Gaps = 6/71 (8%)

Query: 492 HSKKKLLVLDLNGLLV------DIVASPYHRYRPDKMVSNKAVFKRPCCDEFLSFCFERF 545
              KK +V+DL+  LV         A        D  +    V KRP  DEFL    + F
Sbjct: 25  DYGKKCVVIDLDETLVHSSFKPISNADFIVPVEIDGTIHQVYVLKRPHVDEFLQRMGQLF 84

Query: 546 NVGVWSRGSRK 556
              +++    K
Sbjct: 85  ECVLFTASLAK 95

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	560
3qle_A	204	TIM50P; chaperone, mitochondrion, preprotein trans	99.62
3shq_A	320	UBLCP1; phosphatase, hydrolase; 1.96A {Drosophila	99.6
2ght_A	181	Carboxy-terminal domain RNA polymerase II polypept	99.59
2hhl_A	195	CTD small phosphatase-like protein; CTD phosphatas	99.55
3ef1_A	442	RNA polymerase II subunit A C-terminal domain phos	99.42
3ef0_A	372	RNA polymerase II subunit A C-terminal domain phos	99.41
2pr7_A	137	Haloacid dehalogenase/epoxide hydrolase family; NP	96.88
2wm8_A	187	MDP-1, magnesium-dependent phosphatase 1; haloacid	96.66
2i7d_A	193	5'(3')-deoxyribonucleotidase, cytosolic type; hydr	96.49
2gmw_A	211	D,D-heptose 1,7-bisphosphate phosphatase; Zn-bindi	96.43
2oda_A	196	Hypothetical protein pspto_2114; haloacid dehaloge	96.36
3ib6_A	189	Uncharacterized protein; structural genomics, unkn	96.34
2p9j_A	162	Hypothetical protein AQ2171; secsg, riken, PSI, st	96.19
1xpj_A	126	Hypothetical protein; structural genomics, MCSG, p	96.03
2fpr_A	176	Histidine biosynthesis bifunctional protein HISB;	95.85
3m9l_A	205	Hydrolase, haloacid dehalogenase-like family; HAD	95.69
2i33_A	258	Acid phosphatase; HAD superfamily, hydrolase; 1.57	95.49
3kzx_A	231	HAD-superfamily hydrolase, subfamily IA, variant;	95.25
1nnl_A	225	L-3-phosphoserine phosphatase; PSP, HPSP, phospho-	95.08
3mmz_A	176	Putative HAD family hydrolase; structural genomics	94.88
2obb_A	142	Hypothetical protein; structural genomics, PSI-2,	94.6
1k1e_A	180	Deoxy-D-mannose-octulosonate 8-phosphate phosphat;	94.58
3zvl_A	416	Bifunctional polynucleotide phosphatase/kinase; hy	94.54
3ocu_A	262	Lipoprotein E; hydrolase, outer membrane; HET: NMN	94.49
2b0c_A	206	Putative phosphatase; alpha-D-glucose-1-phosphate,	94.48
3mn1_A	189	Probable YRBI family phosphatase; structural genom	94.48
2b82_A	211	APHA, class B acid phosphatase; DDDD acid phosphat	94.42
3pct_A	260	Class C acid phosphatase; hydrolase, outer membran	94.23
3e8m_A	164	Acylneuraminate cytidylyltransferase; 2-keto-3-deo	94.19
3ij5_A	211	3-deoxy-D-manno-octulosonate 8-phosphate phosphat;	93.77
2o2x_A	218	Hypothetical protein; structural genomics, joint c	93.71
3pgv_A	285	Haloacid dehalogenase-like hydrolase; structural g	93.65
3skx_A	280	Copper-exporting P-type ATPase B; P1B-ATPase, ATP	93.62
4eze_A	317	Haloacid dehalogenase-like hydrolase; magnesium bi	93.62
1l7m_A	211	Phosphoserine phosphatase; rossmann fold, four-hel	93.59
3n07_A	195	3-deoxy-D-manno-octulosonate 8-phosphate phosphat;	93.55
3r4c_A	268	Hydrolase, haloacid dehalogenase-like hydrolase; h	93.31
2fue_A	262	PMM 1, PMMH-22, phosphomannomutase 1; enzyme-produ	92.64
3n1u_A	191	Hydrolase, HAD superfamily, subfamily III A; struc	92.29
2r8e_A	188	3-deoxy-D-manno-octulosonate 8-phosphate phosphata	91.49
2hx1_A	284	Predicted sugar phosphatases of the HAD superfamil	91.47
3dao_A	283	Putative phosphatse; structural genomics, joint ce	91.3
3nvb_A	387	Uncharacterized protein; protein FKBH, protein fkb	91.21
3l7y_A	304	Putative uncharacterized protein SMU.1108C; hydrol	91.14
1vjr_A	271	4-nitrophenylphosphatase; TM1742, structural genom	91.08
2c4n_A	250	Protein NAGD; nucleotide phosphatase, HAD superfam	90.97
1q92_A	197	5(3)-deoxyribonucleotidase; alpha-beta rossman fol	90.79
3bwv_A	180	Putative 5'(3')-deoxyribonucleotidase; NP_764060.1	90.69
3gyg_A	289	NTD biosynthesis operon putative hydrolase NTDB; P	90.62
4ex6_A	237	ALNB; modified rossman fold, phosphatase, magnesiu	90.62
3fzq_A	274	Putative hydrolase; YP_001086940.1, putative haloa	90.59
2go7_A	207	Hydrolase, haloacid dehalogenase-like family; stru	90.51
2fi1_A	190	Hydrolase, haloacid dehalogenase-like family; stru	90.43
3d6j_A	225	Putative haloacid dehalogenase-like hydrolase; str	90.37
2hcf_A	234	Hydrolase, haloacid dehalogenase-like family; NP_6	90.34
3e58_A	214	Putative beta-phosphoglucomutase; structu genomics	90.33
2wf7_A	221	Beta-PGM, beta-phosphoglucomutase; transition stat	90.33
2amy_A	246	PMM 2, phosphomannomutase 2; HS.459855, HS.313504,	90.18
4dw8_A	279	Haloacid dehalogenase-like hydrolase; HAD, putativ	90.15
3ddh_A	234	Putative haloacid dehalogenase-like family hydrol;	90.14
1te2_A	226	Putative phosphatase; structural genomics, phospha	90.06
3nuq_A	282	Protein SSM1, putative nucleotide phosphatase; sup	90.01
3dnp_A	290	Stress response protein YHAX; structural PSI-2, pr	90.01
3kd3_A	219	Phosphoserine phosphohydrolase-like protein; csgid	89.98
2pib_A	216	Phosphorylated carbohydrates phosphatase TM_1254;	89.95
3mc1_A	226	Predicted phosphatase, HAD family; PSI2, NYSGXRC,	89.86
2oyc_A	306	PLP phosphatase, pyridoxal phosphate phosphatase;	89.79
2om6_A	235	Probable phosphoserine phosphatase; rossmann fold,	89.79
3mpo_A	279	Predicted hydrolase of the HAD superfamily; SGX, P	89.66
2pke_A	251	Haloacid delahogenase-like family hydrolase; NP_63	89.62
2p11_A	231	Hypothetical protein; putative haloacid dehalogena	89.55
2fdr_A	229	Conserved hypothetical protein; SAD, structural ge	89.54
2b30_A	301	Pvivax hypothetical protein; SGPP, structural geno	89.38
3ewi_A	168	N-acylneuraminate cytidylyltransferase; beta barre	89.27
2w43_A	201	Hypothetical 2-haloalkanoic acid dehalogenase; hyd	89.25
3nas_A	233	Beta-PGM, beta-phosphoglucomutase; PSI, structural	89.21
3fvv_A	232	Uncharacterized protein; unknown function, structu	89.18
3umc_A	254	Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeru	89.17
2pq0_A	258	Hypothetical conserved protein GK1056; hyopthetica	89.13
3smv_A	240	S-(-)-azetidine-2-carboxylate hydrolase; haloacid	89.06
2x4d_A	271	HLHPP, phospholysine phosphohistidine inorganic py	89.03
1zrn_A	232	L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseud	88.91
3dv9_A	247	Beta-phosphoglucomutase; structural genomics, APC6	88.87
1swv_A	267	Phosphonoacetaldehyde hydrolase; HAD enzyme superf	88.85
3ed5_A	238	YFNB; APC60080, bacillus subtilis subsp. subtilis	88.81
2hdo_A	209	Phosphoglycolate phosphatase; NP_784602.1, structu	88.78
4ap9_A	201	Phosphoserine phosphatase; hydrolase, haloacid deh	88.77
3iru_A	277	Phoshonoacetaldehyde hydrolase like protein; phosp	88.77
2i6x_A	211	Hydrolase, haloacid dehalogenase-like family; HAD	88.64
2hsz_A	243	Novel predicted phosphatase; structural genomics,	88.6
2ah5_A	210	COG0546: predicted phosphatases; MCSG, structural	88.6
2hi0_A	240	Putative phosphoglycolate phosphatase; YP_619066.1	88.46
3u26_A	234	PF00702 domain protein; structural genomics, PSI-b	88.41
1wr8_A	231	Phosphoglycolate phosphatase; alpha / beta core do	88.37
3um9_A	230	Haloacid dehalogenase, type II; haloacid dehalogen	88.32
3cnh_A	200	Hydrolase family protein; NP_295428.1, predicted h	88.28
3umg_A	254	Haloacid dehalogenase; defluorinase, hydrolase; 2.	88.24
3vay_A	230	HAD-superfamily hydrolase; rossmann fold, haloacid	88.21
3s6j_A	233	Hydrolase, haloacid dehalogenase-like family; stru	88.19
2no4_A	240	(S)-2-haloacid dehalogenase IVA; HAD superfamily,	87.85
2hoq_A	241	Putative HAD-hydrolase PH1655; haloacid dehalogena	87.81
3m1y_A	217	Phosphoserine phosphatase (SERB); NYSGXRC, PSI II,	87.45
3qnm_A	240	Haloacid dehalogenase-like hydrolase; structural g	87.38
3qxg_A	243	Inorganic pyrophosphatase; hydrolase, magnesium bi	87.34
3umb_A	233	Dehalogenase-like hydrolase; 2.20A {Ralstonia sola	87.24
3l5k_A	250	Protein GS1, haloacid dehalogenase-like hydrolase	87.22
3pdw_A	266	Uncharacterized hydrolase YUTF; structural genomic	87.21
1rlm_A	271	Phosphatase; HAD family, rossman fold, hydrolase;	87.06
2rbk_A	261	Putative uncharacterized protein; HAD-like phospha	87.04
3kc2_A	352	Uncharacterized protein YKR070W; HAD-like, mitocho	86.94
3i28_A	555	Epoxide hydrolase 2; aromatic hydrocarbons catabol	86.88
2ho4_A	259	Haloacid dehalogenase-like hydrolase domain contai	86.75
3kbb_A	216	Phosphorylated carbohydrates phosphatase TM_1254;	86.61
1nf2_A	268	Phosphatase; structural proteomics, HAD NEW fold,	86.59
4eek_A	259	Beta-phosphoglucomutase-related protein; hydrolase	86.58
3sd7_A	240	Putative phosphatase; structural genomics, haloaci	86.57
3qgm_A	268	P-nitrophenyl phosphatase (PHO2); structural genom	86.4
1nrw_A	288	Hypothetical protein, haloacid dehalogenase-like h	86.35
3epr_A	264	Hydrolase, haloacid dehalogenase-like family; stru	86.18
1qq5_A	253	Protein (L-2-haloacid dehalogenase); hydrolase; 1.	86.14
4gib_A	250	Beta-phosphoglucomutase; rossmann fold, HAD-like,	86.11
2nyv_A	222	Pgpase, PGP, phosphoglycolate phosphatase; structu	85.74
2qlt_A	275	(DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, sac	85.7
2zg6_A	220	Putative uncharacterized protein ST2620, probable	85.03
1xvi_A	275	MPGP, YEDP, putative mannosyl-3-phosphoglycerate p	84.98
1rku_A	206	Homoserine kinase; phosphoserine phosphatase, phos	84.83
2gfh_A	260	Haloacid dehalogenase-like hydrolase domain conta;	84.78
3zx4_A	259	MPGP, mannosyl-3-phosphoglycerate phosphatase; hyd	84.71
4dcc_A	229	Putative haloacid dehalogenase-like hydrolase; mag	84.61
3f9r_A	246	Phosphomannomutase; trypanosome glycobiology struc	84.47
1rkq_A	282	Hypothetical protein YIDA; two domain structure wi	84.23
1y8a_A	332	Hypothetical protein AF1437; structural genomics,	84.02
1u02_A	239	Trehalose-6-phosphate phosphatase related protein;	83.29
2zos_A	249	MPGP, mannosyl-3-phosphoglycerate phosphatase; hal	83.26
3k1z_A	263	Haloacid dehalogenase-like hydrolase domain-conta	82.68
4g9b_A	243	Beta-PGM, beta-phosphoglucomutase; HAD, putative p	82.39
1s2o_A	244	SPP, sucrose-phosphatase; phosphohydrolase, HAD su	81.49
1yv9_A	264	Hydrolase, haloacid dehalogenase family; hypotheti	81.44
2fea_A	236	2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate	81.42

>3qle_A TIM50P; chaperone, mitochondrion, preprotein translocation; HET: 1PE; 1.83A {Saccharomyces cerevisiae EC1118}

Probab=99.62  E-value=2.4e-16  Score=145.87  Aligned_cols=67  Identities=21%  Similarity=0.174  Sum_probs=54.4

Q ss_pred             CCCCCCCCCCCCeEEEEecCcccccccCCCCCCCCCCeeeccceeEeCccHHHHHHHHHhccEEEEEccccccccc
Q 042646          484 PPGNVCIGHSKKKLLVLDLNGLLVDIVASPYHRYRPDKMVSNKAVFKRPCCDEFLSFCFERFNVGVWSRGSRKIWT  559 (560)
Q Consensus       484 sP~r~~i~~~KKKLLVLDLDETLVHSSskpp~g~kPDfkV~~yyVyKRPhLDEFLdfVsE~FEVVVWTSS~~kYVd  559 (560)
                      +|.+......+++||||||||||||+...+.         .+++|++|||+++||++++++|+|+||||+.+.||+
T Consensus        23 Lp~~~~~~~~~~~tLVLDLDeTLvh~~~~~~---------~~~~v~~RPgl~eFL~~l~~~yeivI~Tas~~~ya~   89 (204)
T 3qle_A           23 LPPPPPPPYQRPLTLVITLEDFLVHSEWSQK---------HGWRTAKRPGADYFLGYLSQYYEIVLFSSNYMMYSD   89 (204)
T ss_dssp             SCCCC----CCSEEEEEECBTTTEEEEEETT---------TEEEEEECTTHHHHHHHHTTTEEEEEECSSCHHHHH
T ss_pred             CCCCCccccCCCeEEEEeccccEEeeecccc---------CceeEEeCCCHHHHHHHHHhCCEEEEEcCCcHHHHH
Confidence            4444444567899999999999999975432         356899999999999999999999999999999985

>3shq_A UBLCP1; phosphatase, hydrolase; 1.96A {Drosophila melanogaster}

Probab=99.60  E-value=2.5e-16  Score=153.90  Aligned_cols=63  Identities=29%  Similarity=0.464  Sum_probs=53.8

Q ss_pred             CCCCCCCCCeEEEEecCcccccccCCCCCCCCCCeeeccceeEeCccHHHHHHHHHhccEEEEEccccccccc
Q 042646          487 NVCIGHSKKKLLVLDLNGLLVDIVASPYHRYRPDKMVSNKAVFKRPCCDEFLSFCFERFNVGVWSRGSRKIWT  559 (560)
Q Consensus       487 r~~i~~~KKKLLVLDLDETLVHSSskpp~g~kPDfkV~~yyVyKRPhLDEFLdfVsE~FEVVVWTSS~~kYVd  559 (560)
                      ....+.++|+||||||||||||+....          .+.+|++||||++||++|+++|+|+||||+.+.||+
T Consensus       132 ~~~p~~~~k~tLVLDLDeTLvh~~~~~----------~~~~~~~RP~l~eFL~~l~~~yeivIfTas~~~ya~  194 (320)
T 3shq_A          132 ELAPPREGKKLLVLDIDYTLFDHRSPA----------ETGTELMRPYLHEFLTSAYEDYDIVIWSATSMRWIE  194 (320)
T ss_dssp             CSSCCCTTCEEEEECCBTTTBCSSSCC----------SSHHHHBCTTHHHHHHHHHHHEEEEEECSSCHHHHH
T ss_pred             cCCCCcCCCcEEEEeccccEEcccccC----------CCcceEeCCCHHHHHHHHHhCCEEEEEcCCcHHHHH
Confidence            334444589999999999999996422          346899999999999999999999999999999985

>2ght_A Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1; protein-peptide complex, HAD superfamily, hydrolase; HET: SEP; 1.80A {Homo sapiens} PDB: 2ghq_A* 3pgl_A* 1t9z_A* 1ta0_A* 3l0c_A 3l0y_A 3l0b_A* 2q5e_A

Probab=99.59  E-value=9.6e-16  Score=135.97  Aligned_cols=66  Identities=29%  Similarity=0.357  Sum_probs=56.2

Q ss_pred             CCCCeEEEEecCcccccccCCCCCCCCCCeee--------ccceeEeCccHHHHHHHHHhccEEEEEccccccccc
Q 042646          492 HSKKKLLVLDLNGLLVDIVASPYHRYRPDKMV--------SNKAVFKRPCCDEFLSFCFERFNVGVWSRGSRKIWT  559 (560)
Q Consensus       492 ~~KKKLLVLDLDETLVHSSskpp~g~kPDfkV--------~~yyVyKRPhLDEFLdfVsE~FEVVVWTSS~~kYVd  559 (560)
                      ..+|++|||||||||||++..+..  .+|+.+        ..+++.+|||+++||+++.++|+++||||+.+.||+
T Consensus        12 ~~~k~~LVLDLD~TLvhs~~~~~~--~~d~~~~~~~~~~~~~~~v~~rPg~~efL~~l~~~~~i~I~T~~~~~~a~   85 (181)
T 2ght_A           12 DSDKICVVINLDETLVHSSFKPVN--NADFIIPVEIDGVVHQVYVLKRPHVDEFLQRMGELFECVLFTASLAKYAD   85 (181)
T ss_dssp             GTTSCEEEECCBTTTEEEESSCCS--SCSEEEEEEETTEEEEEEEEECTTHHHHHHHHHHHSEEEEECSSCHHHHH
T ss_pred             cCCCeEEEECCCCCeECCcccCCC--CccceeeeeeCCeeEEEEEEeCCCHHHHHHHHHhCCCEEEEcCCCHHHHH
Confidence            357999999999999999876653  344433        457899999999999999999999999999999975

>2hhl_A CTD small phosphatase-like protein; CTD phosphatase, keggins anion, structural genomics, PSI, protein structure initiative; HET: KEG; 2.10A {Homo sapiens}

Probab=99.55  E-value=3.5e-15  Score=134.86  Aligned_cols=66  Identities=30%  Similarity=0.354  Sum_probs=56.1

Q ss_pred             CCCCeEEEEecCcccccccCCCCCCCCCCeee--------ccceeEeCccHHHHHHHHHhccEEEEEccccccccc
Q 042646          492 HSKKKLLVLDLNGLLVDIVASPYHRYRPDKMV--------SNKAVFKRPCCDEFLSFCFERFNVGVWSRGSRKIWT  559 (560)
Q Consensus       492 ~~KKKLLVLDLDETLVHSSskpp~g~kPDfkV--------~~yyVyKRPhLDEFLdfVsE~FEVVVWTSS~~kYVd  559 (560)
                      ..+|++|||||||||||++..+..  .+|+.+        ..++|.+|||+++||+++.++|+++||||+.+.||+
T Consensus        25 ~~~k~~LVLDLD~TLvhs~~~~~~--~~d~~~~~~~~g~~~~~~v~~RPgv~efL~~l~~~~~i~I~Tss~~~~a~   98 (195)
T 2hhl_A           25 DYGKKCVVIDLDETLVHSSFKPIS--NADFIVPVEIDGTIHQVYVLKRPHVDEFLQRMGQLFECVLFTASLAKYAD   98 (195)
T ss_dssp             GTTCCEEEECCBTTTEEEESSCCT--TCSEEEEEEETTEEEEEEEEECTTHHHHHHHHHHHSEEEEECSSCHHHHH
T ss_pred             cCCCeEEEEccccceEcccccCCC--CccceeeeecCCceeeEEEEeCcCHHHHHHHHHcCCeEEEEcCCCHHHHH
Confidence            458999999999999999876543  244433        457899999999999999999999999999999975

>3ef1_A RNA polymerase II subunit A C-terminal domain phosphatase; CTD, FCPH, BRCT, hydrolase, BEF3, acylphosphate analog, cobalt, magnesium; HET: BFD; 2.15A {Schizosaccharomyces pombe}

Probab=99.42  E-value=5.2e-14  Score=144.14  Aligned_cols=67  Identities=16%  Similarity=0.207  Sum_probs=55.4

Q ss_pred             CCCeEEEEecCcccccccCCCCCC------CCC---------Cee--------eccceeEeCccHHHHHHHHHhccEEEE
Q 042646          493 SKKKLLVLDLNGLLVDIVASPYHR------YRP---------DKM--------VSNKAVFKRPCCDEFLSFCFERFNVGV  549 (560)
Q Consensus       493 ~KKKLLVLDLDETLVHSSskpp~g------~kP---------Dfk--------V~~yyVyKRPhLDEFLdfVsE~FEVVV  549 (560)
                      .+|++||||||+||||++..+..+      ..|         +|.        ...|||++|||+++||++++++|+|+|
T Consensus        24 ~~Kl~LVLDLDeTLiHs~~~~~~~~~~~~~~~~~~~~~~dv~~F~l~~~~~~~~~~~~V~~RPgl~eFL~~ls~~yEivI  103 (442)
T 3ef1_A           24 EKRLSLIVXLDQTIIHATVDPTVGEWMSDPGNVNYDVLRDVRSFNLQEGPSGYTSCYYIKFRPGLAQFLQKISELYELHI  103 (442)
T ss_dssp             TTCEEEEECCBTTTEEEECCTHHHHHHTCTTSTTTGGGTTCEEEEEEETTTTEEEEEEEEECTTHHHHHHHHTTTEEEEE
T ss_pred             cCCeEEEEeeccceeccccccccchhccCCCCcchhhhccccceeeeeccCCceeEEEEEeCCCHHHHHHHHhCCcEEEE
Confidence            489999999999999998865210      011         233        356899999999999999999999999


Q ss_pred             Eccccccccc
Q 042646          550 WSRGSRKIWT  559 (560)
Q Consensus       550 WTSS~~kYVd  559 (560)
                      |||+.+.||+
T Consensus       104 fTas~~~YA~  113 (442)
T 3ef1_A          104 YTMGTKAYAK  113 (442)
T ss_dssp             ECSSCHHHHH
T ss_pred             EcCCCHHHHH
Confidence            9999999985

>3ef0_A RNA polymerase II subunit A C-terminal domain phosphatase; CTD, FCPH, BRCT, hydrolase, ALF4, transition state analog, cobalt, magnesium; 2.10A {Schizosaccharomyces pombe}

Probab=99.41  E-value=7.3e-14  Score=139.14  Aligned_cols=67  Identities=18%  Similarity=0.229  Sum_probs=54.6

Q ss_pred             CCCeEEEEecCcccccccCCCCC------CCCC---------Cee--------eccceeEeCccHHHHHHHHHhccEEEE
Q 042646          493 SKKKLLVLDLNGLLVDIVASPYH------RYRP---------DKM--------VSNKAVFKRPCCDEFLSFCFERFNVGV  549 (560)
Q Consensus       493 ~KKKLLVLDLDETLVHSSskpp~------g~kP---------Dfk--------V~~yyVyKRPhLDEFLdfVsE~FEVVV  549 (560)
                      .+|++|||||||||||++..+..      +..|         +|.        ...++|++|||+++||++++++|+|+|
T Consensus        16 ~~k~~LVlDLD~TLvhS~~~~~~~~w~~~~~~~~~~~~~dv~~f~~~~~~~~~~~~~~v~~RPg~~eFL~~l~~~yeivI   95 (372)
T 3ef0_A           16 EKRLSLIVDLDQTIIHATVDPTVGEWMSDPGNVNYDVLRDVRSFNLQEGPSGYTSCYYIKFRPGLAQFLQKISELYELHI   95 (372)
T ss_dssp             HTCEEEEECCBTTTEEEECCTHHHHHHTCTTSTTTGGGTTCEEEEEEETTTTEEEEEEEEECTTHHHHHHHHHTTEEEEE
T ss_pred             CCCCEEEEcCCCCcccccCcCccchhhccCCCCchhhhhhhhceeeeeccCCceEEEEEEECcCHHHHHHHHhcCcEEEE
Confidence            47999999999999999765421      0011         222        356899999999999999999999999


Q ss_pred             Eccccccccc
Q 042646          550 WSRGSRKIWT  559 (560)
Q Consensus       550 WTSS~~kYVd  559 (560)
                      |||+.+.||+
T Consensus        96 ~Tas~~~yA~  105 (372)
T 3ef0_A           96 YTMGTKAYAK  105 (372)
T ss_dssp             ECSSCHHHHH
T ss_pred             EeCCcHHHHH
Confidence            9999999985

>2pr7_A Haloacid dehalogenase/epoxide hydrolase family; NP_599989.1, uncharacterized protein, structural genomics; 1.44A {Corynebacterium glutamicum atcc 13032}

Probab=96.88  E-value=0.00052  Score=53.65  Aligned_cols=45  Identities=13%  Similarity=0.114  Sum_probs=36.6

Q ss_pred             eEEEEecCcccccccCCCCCCCCCCeeeccceeEeCccHHHHHHHHHhc-cEEEEEcccccccc
Q 042646          496 KLLVLDLNGLLVDIVASPYHRYRPDKMVSNKAVFKRPCCDEFLSFCFER-FNVGVWSRGSRKIW  558 (560)
Q Consensus       496 KLLVLDLDETLVHSSskpp~g~kPDfkV~~yyVyKRPhLDEFLdfVsE~-FEVVVWTSS~~kYV  558 (560)
                      |++++|+||||++.                  +...|++.++|+++.+. +.++|.|.+...++
T Consensus         3 k~i~~D~DgtL~~~------------------~~~~~~~~~~l~~L~~~G~~~~i~S~~~~~~~   48 (137)
T 2pr7_A            3 RGLIVDYAGVLDGT------------------DEDQRRWRNLLAAAKKNGVGTVILSNDPGGLG   48 (137)
T ss_dssp             CEEEECSTTTTSSC------------------HHHHHHHHHHHHHHHHTTCEEEEEECSCCGGG
T ss_pred             cEEEEeccceecCC------------------CccCccHHHHHHHHHHCCCEEEEEeCCCHHHH
Confidence            68999999999432                  23568899999999886 99999999876654

>2wm8_A MDP-1, magnesium-dependent phosphatase 1; haloacid dehalogenase, protein phosphatase, hydrolase, magne metal-binding; 1.75A {Homo sapiens} PDB: 1u7o_A 1u7p_A

Probab=96.66  E-value=0.0011  Score=56.40  Aligned_cols=58  Identities=24%  Similarity=0.094  Sum_probs=40.1

Q ss_pred             CeEEEEecCcccccccCCCCCCCCCCe-------ee--ccceeEeCccHHHHHHHHHhc-cEEEEEcccc
Q 042646          495 KKLLVLDLNGLLVDIVASPYHRYRPDK-------MV--SNKAVFKRPCCDEFLSFCFER-FNVGVWSRGS  554 (560)
Q Consensus       495 KKLLVLDLDETLVHSSskpp~g~kPDf-------kV--~~yyVyKRPhLDEFLdfVsE~-FEVVVWTSS~  554 (560)
                      .|++|+||||||+........  .+.+       .+  ..-.+...|++.++|+++.+. +.++|.|++.
T Consensus        27 ~k~vifDlDGTL~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~g~~e~L~~L~~~G~~v~ivT~~~   94 (187)
T 2wm8_A           27 PKLAVFDLDYTLWPFWVDTHV--DPPFHKSSDGTVRDRRGQDVRLYPEVPEVLKRLQSLGVPGAAASRTS   94 (187)
T ss_dssp             CSEEEECSBTTTBSSCTTTSS--CSCCEECTTSCEECTTCCEECCCTTHHHHHHHHHHHTCCEEEEECCS
T ss_pred             cCEEEEcCCCCcchHHHhhcc--CcchhhhcccchhhccCcccCcchhHHHHHHHHHHCCceEEEEeCCC
Confidence            589999999999964322111  0100       00  112456789999999999876 9999999886

>2i7d_A 5'(3')-deoxyribonucleotidase, cytosolic type; hydrolase; HET: DUR; 1.20A {Homo sapiens} PDB: 2jar_A* 2jao_A*

Probab=96.49  E-value=0.0033  Score=53.67  Aligned_cols=32  Identities=9%  Similarity=-0.131  Sum_probs=27.1

Q ss_pred             eEeCccHHHHHHHHHhc--cEEEEEccccccccc
Q 042646          528 VFKRPCCDEFLSFCFER--FNVGVWSRGSRKIWT  559 (560)
Q Consensus       528 VyKRPhLDEFLdfVsE~--FEVVVWTSS~~kYVd  559 (560)
                      +...|++.+||+++.+.  |.++|-|++...++.
T Consensus        72 ~~~~~g~~e~L~~L~~~~g~~~~ivT~~~~~~~~  105 (193)
T 2i7d_A           72 LEPIPGALDAVREMNDLPDTQVFICTSPLLKYHH  105 (193)
T ss_dssp             CCBCTTHHHHHHHHHTSTTEEEEEEECCCSSCTT
T ss_pred             CccCcCHHHHHHHHHhCCCCeEEEEeCCChhhHH
Confidence            45689999999999985  999999999877653

>2gmw_A D,D-heptose 1,7-bisphosphate phosphatase; Zn-binding protein, hydrolase; 1.50A {Escherichia coli} SCOP: c.108.1.19 PDB: 3esq_A 3esr_A 3l1u_A 3l1v_A 3l8e_A 3l8f_A 3l8g_A*

Probab=96.43  E-value=0.003  Score=55.25  Aligned_cols=67  Identities=12%  Similarity=0.017  Sum_probs=39.3

Q ss_pred             CccccCCCCCCCCCCCCCeEEEEecCcccccccCCCCCCCCCCeeeccceeEeCccHHHHHHHHHhc-cEEEEEcccc
Q 042646          478 SQTLQYPPGNVCIGHSKKKLLVLDLNGLLVDIVASPYHRYRPDKMVSNKAVFKRPCCDEFLSFCFER-FNVGVWSRGS  554 (560)
Q Consensus       478 ~qslq~sP~r~~i~~~KKKLLVLDLDETLVHSSskpp~g~kPDfkV~~yyVyKRPhLDEFLdfVsE~-FEVVVWTSS~  554 (560)
                      .++....|+..... .+.|+++||+||||+....  .   ...    ...+...|++.+||+++.+. |.++|.|...
T Consensus         9 ~~~~~~~~~~~~m~-~~~k~v~~D~DGTL~~~~~--~---~~~----~~~~~~~pg~~e~L~~L~~~G~~~~ivTn~~   76 (211)
T 2gmw_A            9 HHSSGLVPRGSHMA-KSVPAIFLDRDGTINVDHG--Y---VHE----IDNFEFIDGVIDAMRELKKMGFALVVVTNQS   76 (211)
T ss_dssp             ----------------CBCEEEECSBTTTBCCCS--S---CCS----GGGCCBCTTHHHHHHHHHHTTCEEEEEEECT
T ss_pred             cccccccccchhhh-hcCCEEEEcCCCCeECCCC--c---ccC----cccCcCCcCHHHHHHHHHHCCCeEEEEECcC
Confidence            34445566665553 3578999999999997531  1   111    11345679999999999876 9999999887

>2oda_A Hypothetical protein pspto_2114; haloacid dehalogenase, phosphonoacetaldehyde hydrolase, protein binding; HET: EPE; 1.90A {Pseudomonas syringae PV}

Probab=96.36  E-value=0.0028  Score=55.79  Aligned_cols=59  Identities=15%  Similarity=0.121  Sum_probs=39.8

Q ss_pred             CCeEEEEecCcccccccCCCCCCCCCCeeeccceeEeCccHHHHHHHHHhc-cEEEEEcccccc
Q 042646          494 KKKLLVLDLNGLLVDIVASPYHRYRPDKMVSNKAVFKRPCCDEFLSFCFER-FNVGVWSRGSRK  556 (560)
Q Consensus       494 KKKLLVLDLDETLVHSSskpp~g~kPDfkV~~yyVyKRPhLDEFLdfVsE~-FEVVVWTSS~~k  556 (560)
                      ..|.++|||||||++......    +........+...|++.++|+++.+. |.++|-|+....
T Consensus         5 ~~kav~fDlDGTL~d~~~~~~----~~~~~~~~~~~~~pg~~e~L~~L~~~g~~~~i~T~~~~~   64 (196)
T 2oda_A            5 TFPALLFGLSGCLVDFGAQAA----TSDTPDDEHAQLTPGAQNALKALRDQGMPCAWIDELPEA   64 (196)
T ss_dssp             CCSCEEEETBTTTBCTTSTTT----SCSSCCGGGGSBCTTHHHHHHHHHHHTCCEEEECCSCHH
T ss_pred             cCCEEEEcCCCceEecccccc----chhhcccccCCcCcCHHHHHHHHHHCCCEEEEEcCChHH
Confidence            468999999999998321111    11110112344569999999999875 999999876554

>3ib6_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Listeria monocytogenes}

Probab=96.34  E-value=0.0041  Score=53.18  Aligned_cols=58  Identities=16%  Similarity=0.173  Sum_probs=40.2

Q ss_pred             CeEEEEecCcccccccCCCCCCCCCCeeeccceeEeCccHHHHHHHHHhc-cEEEEEccccc
Q 042646          495 KKLLVLDLNGLLVDIVASPYHRYRPDKMVSNKAVFKRPCCDEFLSFCFER-FNVGVWSRGSR  555 (560)
Q Consensus       495 KKLLVLDLDETLVHSSskpp~g~kPDfkV~~yyVyKRPhLDEFLdfVsE~-FEVVVWTSS~~  555 (560)
                      -|+++||+||||+.......   .....-..-.+...|++.+||+++.+. |.++|.|.+..
T Consensus         3 ik~vifD~DgtL~~~~~~~y---~~~~~~~~~~~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~   61 (189)
T 3ib6_A            3 LTHVIWDMGETLNTVPNTRY---DHHPLDTYPEVVLRKNAKETLEKVKQLGFKQAILSNTAT   61 (189)
T ss_dssp             CCEEEECTBTTTBCCCTTSS---CSSCGGGCTTCCBCTTHHHHHHHHHHTTCEEEEEECCSS
T ss_pred             ceEEEEcCCCceeeccchhh---hhHHHhccCCceeCcCHHHHHHHHHHCCCEEEEEECCCc
Confidence            47899999999988422111   111111112366889999999999887 99999997654

>2p9j_A Hypothetical protein AQ2171; secsg, riken, PSI, structural GENO protein structure initiative, southeast collaboratory for S genomics; 2.40A {Aquifex aeolicus}

Probab=96.19  E-value=0.0023  Score=52.77  Aligned_cols=57  Identities=16%  Similarity=0.080  Sum_probs=40.3

Q ss_pred             CeEEEEecCcccccccCCCCCCCCCCeeeccceeEeCccHHHHHHHHHhc-cEEEEEcccccccc
Q 042646          495 KKLLVLDLNGLLVDIVASPYHRYRPDKMVSNKAVFKRPCCDEFLSFCFER-FNVGVWSRGSRKIW  558 (560)
Q Consensus       495 KKLLVLDLDETLVHSSskpp~g~kPDfkV~~yyVyKRPhLDEFLdfVsE~-FEVVVWTSS~~kYV  558 (560)
                      -|++++||||||++.....    .+.   ........|...++|+++.+. +.++|.|++...++
T Consensus         9 ~k~v~~DlDGTL~~~~~~~----~~~---~~~~~~~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~   66 (162)
T 2p9j_A            9 LKLLIMDIDGVLTDGKLYY----TEH---GETIKVFNVLDGIGIKLLQKMGITLAVISGRDSAPL   66 (162)
T ss_dssp             CCEEEECCTTTTSCSEEEE----ETT---EEEEEEEEHHHHHHHHHHHTTTCEEEEEESCCCHHH
T ss_pred             eeEEEEecCcceECCceee----cCC---CceeeeecccHHHHHHHHHHCCCEEEEEeCCCcHHH
Confidence            5899999999999853211    011   111234567888999999876 99999999876543

>1xpj_A Hypothetical protein; structural genomics, MCSG, protein STR initiative, PSI, midwest center for structural genomics, UN function; HET: TLA; 2.30A {Vibrio cholerae} SCOP: c.108.1.18

Probab=96.03  E-value=0.0069  Score=50.40  Aligned_cols=50  Identities=26%  Similarity=0.309  Sum_probs=34.3

Q ss_pred             eEEEEecCcccccccCCCCCCCCCCeeeccceeEeCccHHHHHHHHHhc-cEEEEEcccccc
Q 042646          496 KLLVLDLNGLLVDIVASPYHRYRPDKMVSNKAVFKRPCCDEFLSFCFER-FNVGVWSRGSRK  556 (560)
Q Consensus       496 KLLVLDLDETLVHSSskpp~g~kPDfkV~~yyVyKRPhLDEFLdfVsE~-FEVVVWTSS~~k  556 (560)
                      |++++||||||++......    .       .+...|...+.|+.+.+. +.++|+|.....
T Consensus         2 k~i~~DlDGTL~~~~~~~~----~-------~~~~~~~~~~~l~~l~~~Gi~~~iaTGR~~~   52 (126)
T 1xpj_A            2 KKLIVDLDGTLTQANTSDY----R-------NVLPRLDVIEQLREYHQLGFEIVISTARNMR   52 (126)
T ss_dssp             CEEEECSTTTTBCCCCSCG----G-------GCCBCHHHHHHHHHHHHTTCEEEEEECTTTT
T ss_pred             CEEEEecCCCCCCCCCCcc----c-------cCCCCHHHHHHHHHHHhCCCeEEEEeCCChh
Confidence            6899999999998642211    0       012346777888887655 888898877643

>2fpr_A Histidine biosynthesis bifunctional protein HISB; histidinola phosphate phosphatase, bifunctional enzyme structural genomics; 1.70A {Escherichia coli} SCOP: c.108.1.19 PDB: 2fps_A 2fpu_A* 2fpx_A 2fpw_A*

Probab=95.85  E-value=0.0095  Score=51.17  Aligned_cols=55  Identities=16%  Similarity=0.134  Sum_probs=39.8

Q ss_pred             CCCeEEEEecCcccccccCCCCCCCCCCeeeccceeEeCccHHHHHHHHHhc-cEEEEEccc
Q 042646          493 SKKKLLVLDLNGLLVDIVASPYHRYRPDKMVSNKAVFKRPCCDEFLSFCFER-FNVGVWSRG  553 (560)
Q Consensus       493 ~KKKLLVLDLDETLVHSSskpp~g~kPDfkV~~yyVyKRPhLDEFLdfVsE~-FEVVVWTSS  553 (560)
                      .+-|+++||+||||+.......  +..    ..-.+...|++.++|+++.+. |.++|.|.+
T Consensus        12 ~~~k~~~~D~Dgtl~~~~~~~~--~~~----~~~~~~~~pg~~e~L~~L~~~G~~l~i~Tn~   67 (176)
T 2fpr_A           12 SSQKYLFIDRDGTLISEPPSDF--QVD----RFDKLAFEPGVIPQLLKLQKAGYKLVMITNQ   67 (176)
T ss_dssp             -CCEEEEECSBTTTBCCC--CC--CCC----SGGGCCBCTTHHHHHHHHHHTTEEEEEEEEC
T ss_pred             CcCcEEEEeCCCCeEcCCCCCc--CcC----CHHHCcCCccHHHHHHHHHHCCCEEEEEECC
Confidence            3789999999999997632111  000    111356789999999999876 999999987

>3m9l_A Hydrolase, haloacid dehalogenase-like family; HAD family hydrolase, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Pseudomonas fluorescens} PDB: 2ybd_A* 3r09_A*

Probab=95.69  E-value=0.0073  Score=50.61  Aligned_cols=31  Identities=19%  Similarity=0.370  Sum_probs=26.4

Q ss_pred             eeEeCccHHHHHHHHHhc-cEEEEEccccccc
Q 042646          527 AVFKRPCCDEFLSFCFER-FNVGVWSRGSRKI  557 (560)
Q Consensus       527 yVyKRPhLDEFLdfVsE~-FEVVVWTSS~~kY  557 (560)
                      .+...|++.+||+++.+. |.++|.|.....+
T Consensus        68 ~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~   99 (205)
T 3m9l_A           68 GSRPAPGAVELVRELAGRGYRLGILTRNAREL   99 (205)
T ss_dssp             EEEECTTHHHHHHHHHHTTCEEEEECSSCHHH
T ss_pred             cCCCCccHHHHHHHHHhcCCeEEEEeCCchHH
Confidence            457889999999999987 9999999886554

>2i33_A Acid phosphatase; HAD superfamily, hydrolase; 1.57A {Bacillus anthracis} PDB: 2i34_A

Probab=95.49  E-value=0.011  Score=55.26  Aligned_cols=62  Identities=19%  Similarity=0.224  Sum_probs=40.5

Q ss_pred             CCCeEEEEecCcccccccCC------CCCCCCCCe--eeccceeEeCccHHHHHHHHHhc-cEEEEEcccc
Q 042646          493 SKKKLLVLDLNGLLVDIVAS------PYHRYRPDK--MVSNKAVFKRPCCDEFLSFCFER-FNVGVWSRGS  554 (560)
Q Consensus       493 ~KKKLLVLDLDETLVHSSsk------pp~g~kPDf--kV~~yyVyKRPhLDEFLdfVsE~-FEVVVWTSS~  554 (560)
                      .+.+++||||||||++....      ....+...+  .+........|++.+||+++.+. +.|+|-|++.
T Consensus        57 ~~~kavifDlDGTLld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~e~L~~L~~~Gi~i~iaTnr~  127 (258)
T 2i33_A           57 EKKPAIVLDLDETVLDNSPHQAMSVKTGKGYPYKWDDWINKAEAEALPGSIDFLKYTESKGVDIYYISNRK  127 (258)
T ss_dssp             SSEEEEEECSBTTTEECHHHHHHHHHHSCCTTTTHHHHHHHCCCEECTTHHHHHHHHHHTTCEEEEEEEEE
T ss_pred             CCCCEEEEeCcccCcCCHHHHHHHHhcccchHHHHHHHHHcCCCCcCccHHHHHHHHHHCCCEEEEEcCCc
Confidence            46899999999999987310      000010000  00001144679999999999877 9999999876

>3kzx_A HAD-superfamily hydrolase, subfamily IA, variant; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 1.90A {Ehrlichia chaffeensis}

Probab=95.25  E-value=0.01  Score=50.06  Aligned_cols=31  Identities=13%  Similarity=0.054  Sum_probs=25.9

Q ss_pred             eeEeCccHHHHHHHHHhc-cEEEEEccccccc
Q 042646          527 AVFKRPCCDEFLSFCFER-FNVGVWSRGSRKI  557 (560)
Q Consensus       527 yVyKRPhLDEFLdfVsE~-FEVVVWTSS~~kY  557 (560)
                      .+...|++.+||+++.+. |.++|.|.+...+
T Consensus       101 ~~~~~~~~~~~l~~l~~~g~~~~i~T~~~~~~  132 (231)
T 3kzx_A          101 NFMLNDGAIELLDTLKENNITMAIVSNKNGER  132 (231)
T ss_dssp             CCEECTTHHHHHHHHHHTTCEEEEEEEEEHHH
T ss_pred             cceECcCHHHHHHHHHHCCCeEEEEECCCHHH
Confidence            456889999999999987 9999999876543

>1nnl_A L-3-phosphoserine phosphatase; PSP, HPSP, phospho-aspartyl, hydrolase; 1.53A {Homo sapiens} SCOP: c.108.1.4 PDB: 1l8l_A* 1l8o_A

Probab=95.08  E-value=0.017  Score=49.01  Aligned_cols=31  Identities=32%  Similarity=0.225  Sum_probs=26.1

Q ss_pred             eEeCccHHHHHHHHHhc-cEEEEEcccccccc
Q 042646          528 VFKRPCCDEFLSFCFER-FNVGVWSRGSRKIW  558 (560)
Q Consensus       528 VyKRPhLDEFLdfVsE~-FEVVVWTSS~~kYV  558 (560)
                      +..+|++.+||+++.+. |.++|.|++...++
T Consensus        85 ~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~  116 (225)
T 1nnl_A           85 PHLTPGIRELVSRLQERNVQVFLISGGFRSIV  116 (225)
T ss_dssp             CCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHH
T ss_pred             CCCCccHHHHHHHHHHCCCcEEEEeCChHHHH
Confidence            45789999999999876 99999999876543

>3mmz_A Putative HAD family hydrolase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.84A {Streptomyces avermitilis}

Probab=94.88  E-value=0.012  Score=50.58  Aligned_cols=58  Identities=14%  Similarity=0.056  Sum_probs=35.3

Q ss_pred             CCeEEEEecCcccccccCCCCCCCCCCeeeccceeEeCccHHHHHHHHHhc-cEEEEEcccccccc
Q 042646          494 KKKLLVLDLNGLLVDIVASPYHRYRPDKMVSNKAVFKRPCCDEFLSFCFER-FNVGVWSRGSRKIW  558 (560)
Q Consensus       494 KKKLLVLDLDETLVHSSskpp~g~kPDfkV~~yyVyKRPhLDEFLdfVsE~-FEVVVWTSS~~kYV  558 (560)
                      .-+++||||||||++....    +..+... -..+..++.+  +|+++.+. +.++|-|+....++
T Consensus        11 ~~k~vifD~DGTL~d~~~~----~~~~~~~-~~~~~~~~~~--~l~~L~~~g~~~~i~T~~~~~~~   69 (176)
T 3mmz_A           11 DIDAVVLDFDGTQTDDRVL----IDSDGRE-FVSVHRGDGL--GIAALRKSGLTMLILSTEQNPVV   69 (176)
T ss_dssp             GCSEEEECCTTTTSCSCCE----ECTTCCE-EEEEEHHHHH--HHHHHHHTTCEEEEEESSCCHHH
T ss_pred             cCCEEEEeCCCCcCcCCEe----ecCCccH-hHhcccccHH--HHHHHHHCCCeEEEEECcChHHH
Confidence            3579999999999993110    0111000 0112223333  78888766 99999999877654

>2obb_A Hypothetical protein; structural genomics, PSI-2, PR structure initiative, midwest center for structural genomic unknown function; 2.20A {Bacteroides thetaiotaomicron} SCOP: c.108.1.25

Probab=94.60  E-value=0.038  Score=48.82  Aligned_cols=47  Identities=17%  Similarity=0.251  Sum_probs=32.9

Q ss_pred             CeEEEEecCcccccccCCCCCCCCCCeeeccceeEeCccHHHHHHHHHhc-cEEEEEcccc
Q 042646          495 KKLLVLDLNGLLVDIVASPYHRYRPDKMVSNKAVFKRPCCDEFLSFCFER-FNVGVWSRGS  554 (560)
Q Consensus       495 KKLLVLDLDETLVHSSskpp~g~kPDfkV~~yyVyKRPhLDEFLdfVsE~-FEVVVWTSS~  554 (560)
                      .|++++||||||+.......         .    -.-|...+.|+.+.+. +.|+|||...
T Consensus         3 ~k~i~~DlDGTL~~~~~~~i---------~----~~~~~~~~al~~l~~~G~~iii~TgR~   50 (142)
T 2obb_A            3 AMTIAVDFDGTIVEHRYPRI---------G----EEIPFAVETLKLLQQEKHRLILWSVRE   50 (142)
T ss_dssp             CCEEEECCBTTTBCSCTTSC---------C----CBCTTHHHHHHHHHHTTCEEEECCSCC
T ss_pred             CeEEEEECcCCCCCCCCccc---------c----ccCHHHHHHHHHHHHCCCEEEEEeCCC
Confidence            57999999999998421100         0    1236778888888765 8888888764

>1k1e_A Deoxy-D-mannose-octulosonate 8-phosphate phosphat; structural genomics, KDO 8-P phosphatase, structure function project, S2F; HET: MES; 1.67A {Haemophilus influenzae RD} SCOP: c.108.1.5 PDB: 1j8d_A*

Probab=94.58  E-value=0.021  Score=48.74  Aligned_cols=57  Identities=18%  Similarity=0.175  Sum_probs=38.2

Q ss_pred             CeEEEEecCcccccccCCCCCCCCCCeeeccceeEeCccHHHHHHHHHhc-cEEEEEcccccccc
Q 042646          495 KKLLVLDLNGLLVDIVASPYHRYRPDKMVSNKAVFKRPCCDEFLSFCFER-FNVGVWSRGSRKIW  558 (560)
Q Consensus       495 KKLLVLDLDETLVHSSskpp~g~kPDfkV~~yyVyKRPhLDEFLdfVsE~-FEVVVWTSS~~kYV  558 (560)
                      -|++++||||||++....    +.++.   ...-...|...++|+++.+. +.++|-|.....++
T Consensus         8 ik~i~~DlDGTL~~~~~~----~~~~~---~~~~~~~~~~~~~l~~L~~~G~~~~i~Tg~~~~~~   65 (180)
T 1k1e_A            8 IKFVITDVDGVLTDGQLH----YDANG---EAIKSFHVRDGLGIKMLMDADIQVAVLSGRDSPIL   65 (180)
T ss_dssp             CCEEEEECTTTTSCSEEE----EETTE---EEEEEEEHHHHHHHHHHHHTTCEEEEEESCCCHHH
T ss_pred             CeEEEEeCCCCcCCCCee----eccCc---ceeeeeccchHHHHHHHHHCCCeEEEEeCCCcHHH
Confidence            589999999999985321    01111   11122445667899999876 99999998876543

>3zvl_A Bifunctional polynucleotide phosphatase/kinase; hydrolase-transferase complex, base excision repair, BER, non-homologous END-joining, NHEJ; 1.65A {Mus musculus} PDB: 3zvm_A* 3zvn_A* 1yj5_A 3u7e_B* 3u7f_B* 3u7h_B* 3u7g_A*

Probab=94.54  E-value=0.059  Score=53.23  Aligned_cols=56  Identities=14%  Similarity=0.197  Sum_probs=40.1

Q ss_pred             CCCeEEEEecCcccccccCC-CCCCCCCCeeeccceeEeCccHHHHHHHHHhc-cEEEEEcccc
Q 042646          493 SKKKLLVLDLNGLLVDIVAS-PYHRYRPDKMVSNKAVFKRPCCDEFLSFCFER-FNVGVWSRGS  554 (560)
Q Consensus       493 ~KKKLLVLDLDETLVHSSsk-pp~g~kPDfkV~~yyVyKRPhLDEFLdfVsE~-FEVVVWTSS~  554 (560)
                      ...|+++||+||||+..... .......+      +...-|++.++|+++.+. |.++|.|...
T Consensus        56 ~~~k~v~fD~DGTL~~~~~~~~~~~~~~~------~~~~~pgv~e~L~~L~~~G~~l~IvTN~~  113 (416)
T 3zvl_A           56 PQGKVAAFDLDGTLITTRSGKVFPTSPSD------WRILYPEIPKKLQELAAEGYKLVIFTNQM  113 (416)
T ss_dssp             CCSSEEEECSBTTTEECSSCSSSCSSTTC------CEESCTTHHHHHHHHHHTTCEEEEEEECH
T ss_pred             CCCeEEEEeCCCCccccCCCccCCCCHHH------hhhhcccHHHHHHHHHHCCCeEEEEeCCc
Confidence            36789999999999976421 11101111      334679999999999876 9999999843

>3ocu_A Lipoprotein E; hydrolase, outer membrane; HET: NMN; 1.35A {Haemophilus influenzae} PDB: 3ocv_A* 3ocw_A* 3ocx_A* 3ocz_A* 3ocy_A* 3sf0_A* 2hlk_A 2hll_A 3et4_A 3et5_A

Probab=94.49  E-value=0.011  Score=56.92  Aligned_cols=63  Identities=21%  Similarity=0.185  Sum_probs=43.0

Q ss_pred             CCCeEEEEecCcccccccCC------CCCCCCCC---eeeccceeEeCccHHHHHHHHHhc-cEEEEEccccc
Q 042646          493 SKKKLLVLDLNGLLVDIVAS------PYHRYRPD---KMVSNKAVFKRPCCDEFLSFCFER-FNVGVWSRGSR  555 (560)
Q Consensus       493 ~KKKLLVLDLDETLVHSSsk------pp~g~kPD---fkV~~yyVyKRPhLDEFLdfVsE~-FEVVVWTSS~~  555 (560)
                      .+++++|||+||||++.+..      ....+.+.   .-+..-.....|++.+||+++.+. +.|+|-|+...
T Consensus        56 ~~~~avVfDIDgTlldn~~y~~~~~~~~~~f~~~~w~~wv~~~~~~~~pG~~ell~~L~~~G~ki~ivTgR~~  128 (262)
T 3ocu_A           56 GKKKAVVADLNETMLDNSPYAGWQVQNNKPFDGKDWTRWVDARQSRAVPGAVEFNNYVNSHNGKVFYVTNRKD  128 (262)
T ss_dssp             TCEEEEEECCBTTTEECHHHHHHHHHHTCCCCHHHHHHHHHHTCCEECTTHHHHHHHHHHTTEEEEEEEEEET
T ss_pred             CCCeEEEEECCCcCCCCchhhhhhccccccCCHHHHHHHHHcCCCCCCccHHHHHHHHHHCCCeEEEEeCCCc
Confidence            46789999999999987521      01111110   001112467889999999999876 99999998765

>2b0c_A Putative phosphatase; alpha-D-glucose-1-phosphate, structural genomic protein structure initiative, midwest center for structural genomics, MCSG; HET: G1P; 2.00A {Escherichia coli} SCOP: c.108.1.2

Probab=94.48  E-value=0.02  Score=47.30  Aligned_cols=31  Identities=26%  Similarity=0.055  Sum_probs=26.4

Q ss_pred             eEeCccHHHHHHHHHh-ccEEEEEcccccccc
Q 042646          528 VFKRPCCDEFLSFCFE-RFNVGVWSRGSRKIW  558 (560)
Q Consensus       528 VyKRPhLDEFLdfVsE-~FEVVVWTSS~~kYV  558 (560)
                      +...|++.++|+++.+ .+.++|.|.+...++
T Consensus        90 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~  121 (206)
T 2b0c_A           90 VALRPEVIAIMHKLREQGHRVVVLSNTNRLHT  121 (206)
T ss_dssp             EEECHHHHHHHHHHHHTTCEEEEEECCCCCTT
T ss_pred             cccCccHHHHHHHHHHCCCeEEEEECCChHHH
Confidence            6788999999999985 499999999877664

>3mn1_A Probable YRBI family phosphatase; structural genomics, PSI, protein structure initiative, NYSG phosphatase; 1.80A {Pseudomonas syringae PV} PDB: 3nrj_A

Probab=94.48  E-value=0.015  Score=50.42  Aligned_cols=58  Identities=19%  Similarity=0.082  Sum_probs=36.2

Q ss_pred             CCeEEEEecCcccccccCCCCCCCCCCeeeccceeEeCccHHHHHHHHHhc-cEEEEEcccccccc
Q 042646          494 KKKLLVLDLNGLLVDIVASPYHRYRPDKMVSNKAVFKRPCCDEFLSFCFER-FNVGVWSRGSRKIW  558 (560)
Q Consensus       494 KKKLLVLDLDETLVHSSskpp~g~kPDfkV~~yyVyKRPhLDEFLdfVsE~-FEVVVWTSS~~kYV  558 (560)
                      .-+++||||||||+++.....    ..... -..+..++++  +|+++.+. +.++|-|+.....+
T Consensus        18 ~ik~vifD~DGTL~d~~~~~~----~~~~~-~~~~~~~~~~--~l~~L~~~g~~~~i~T~~~~~~~   76 (189)
T 3mn1_A           18 AIKLAVFDVDGVLTDGRLYFM----EDGSE-IKTFNTLDGQ--GIKMLIASGVTTAIISGRKTAIV   76 (189)
T ss_dssp             TCCEEEECSTTTTSCSEEEEE----TTSCE-EEEEEHHHHH--HHHHHHHTTCEEEEECSSCCHHH
T ss_pred             hCCEEEEcCCCCcCCccEeec----cCCcE-eeeeccccHH--HHHHHHHCCCEEEEEECcChHHH
Confidence            458999999999998632110    11000 0112233333  88888876 99999999877654

>2b82_A APHA, class B acid phosphatase; DDDD acid phosphatase, metallo-ENZ hydrolase; HET: ADN; 1.25A {Escherichia coli} SCOP: c.108.1.12 PDB: 2b8j_A* 2hf7_A 1rmt_A* 1n9k_A 1rmq_A 1n8n_A* 1rmy_A* 2g1a_A* 3cz4_A 2heg_A* 1z5g_A 1z5u_A* 1z88_A 2aut_A

Probab=94.42  E-value=0.033  Score=49.67  Aligned_cols=65  Identities=6%  Similarity=0.080  Sum_probs=40.8

Q ss_pred             CCeEEEEecCcccccccCCCC---CCCCCC---eee-----------ccceeEeCccHHHHHHHHHhc-cEEEEEccccc
Q 042646          494 KKKLLVLDLNGLLVDIVASPY---HRYRPD---KMV-----------SNKAVFKRPCCDEFLSFCFER-FNVGVWSRGSR  555 (560)
Q Consensus       494 KKKLLVLDLDETLVHSSskpp---~g~kPD---fkV-----------~~yyVyKRPhLDEFLdfVsE~-FEVVVWTSS~~  555 (560)
                      ..|.++|||||||+++.....   ..+.+.   +..           ...+....|++.+||+++.+. +.++|-|++..
T Consensus        36 ~~kaviFDlDGTL~Ds~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~L~~~G~~l~ivTn~~~  115 (211)
T 2b82_A           36 PPMAVGFDIDDTVLFSSPGFWRGKKTFSPESEDYLKNPVFWEKMNNGWDEFSIPKEVARQLIDMHVRRGDAIFFVTGRSP  115 (211)
T ss_dssp             CCCEEEECCBTTTEECHHHHHHHHHHHCTTSSGGGGCHHHHHHHHTTGGGGCEECHHHHHHHHHHHHHTCEEEEEECSCC
T ss_pred             CCCEEEEcCCCCCCcCcHHHHHHHHHhhHHHHHHhhhHHHHHHHHHhHHhcCCCcHHHHHHHHHHHHCCCEEEEEcCCcH
Confidence            468999999999999632100   000000   000           000123467999999999875 99999999876


Q ss_pred             ccc
Q 042646          556 KIW  558 (560)
Q Consensus       556 kYV  558 (560)
                      ..+
T Consensus       116 ~~~  118 (211)
T 2b82_A          116 TKT  118 (211)
T ss_dssp             CSS
T ss_pred             HHH
Confidence            654

>3pct_A Class C acid phosphatase; hydrolase, outer membrane; 1.85A {Pasteurella multocida}

Probab=94.23  E-value=0.015  Score=55.97  Aligned_cols=63  Identities=24%  Similarity=0.260  Sum_probs=41.9

Q ss_pred             CCeEEEEecCcccccccCC------CCCCCCCC---eeeccceeEeCccHHHHHHHHHhc-cEEEEEcccccc
Q 042646          494 KKKLLVLDLNGLLVDIVAS------PYHRYRPD---KMVSNKAVFKRPCCDEFLSFCFER-FNVGVWSRGSRK  556 (560)
Q Consensus       494 KKKLLVLDLDETLVHSSsk------pp~g~kPD---fkV~~yyVyKRPhLDEFLdfVsE~-FEVVVWTSS~~k  556 (560)
                      +++++|||+||||++.+..      ....+.+.   .-+..-.....|++.+||+++.+. +.|+|-|+....
T Consensus        57 ~~~avVfDIDgTlldn~~y~~~~~~~~~~f~~~~w~~wv~~g~~~~~pg~~ell~~L~~~G~~i~ivTgR~~~  129 (260)
T 3pct_A           57 KKKAVVVDLDETMIDNSAYAGWQVQSGQGFSPKTWTKWVDARQSAAIPGAVEFSNYVNANGGTMFFVSNRRDD  129 (260)
T ss_dssp             -CEEEEECCBTTTEECHHHHHHHHHHTCCCCHHHHHHHHHTTCCEECTTHHHHHHHHHHTTCEEEEEEEEETT
T ss_pred             CCCEEEEECCccCcCChhHHHhhcccCCCCCHHHHHHHHHcCCCCCCccHHHHHHHHHHCCCeEEEEeCCCcc
Confidence            4579999999999986521      01111110   001112467889999999999876 999999987653

>3e8m_A Acylneuraminate cytidylyltransferase; 2-keto-3-deoxynononic acid 9-phosphate phosphohydrolase, nucleotidyltransferase; HET: PEG PG4 EDO PGE; 1.10A {Bacteroides thetaiotaomicron} PDB: 3e84_A 3e81_A*

Probab=94.19  E-value=0.0084  Score=49.51  Aligned_cols=58  Identities=16%  Similarity=0.142  Sum_probs=35.9

Q ss_pred             CCeEEEEecCcccccccCCCCCCCCCCeeeccceeEeCccHHHHHHHHHhc-cEEEEEcccccccc
Q 042646          494 KKKLLVLDLNGLLVDIVASPYHRYRPDKMVSNKAVFKRPCCDEFLSFCFER-FNVGVWSRGSRKIW  558 (560)
Q Consensus       494 KKKLLVLDLDETLVHSSskpp~g~kPDfkV~~yyVyKRPhLDEFLdfVsE~-FEVVVWTSS~~kYV  558 (560)
                      .-+++++|+||||++......    +... .-..+..+.++  +|+++.+. +.++|.|.....++
T Consensus         3 ~ik~vifD~DGTL~~~~~~~~----~~~~-~~~~~~~~~~~--~l~~l~~~g~~~~i~T~~~~~~~   61 (164)
T 3e8m_A            3 EIKLILTDIDGVWTDGGMFYD----QTGN-EWKKFNTSDSA--GIFWAHNKGIPVGILTGEKTEIV   61 (164)
T ss_dssp             CCCEEEECSTTTTSSSEEEEC----SSSC-EEEEEEGGGHH--HHHHHHHTTCCEEEECSSCCHHH
T ss_pred             cceEEEEcCCCceEcCcEEEc----CCCc-EEEEecCChHH--HHHHHHHCCCEEEEEeCCChHHH
Confidence            357999999999998532111    0100 00122333433  68888876 99999998876544

>3ij5_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; IDP022 hydrolase, lipopolysaccharide biosynthesis, magnesium, STRU genomics; 1.95A {Yersinia pestis}

Probab=93.77  E-value=0.027  Score=50.86  Aligned_cols=58  Identities=17%  Similarity=0.165  Sum_probs=36.1

Q ss_pred             CCeEEEEecCcccccccCCCCCCCCCCeeeccceeEeCccHHHHHHHHHhc-cEEEEEcccccccc
Q 042646          494 KKKLLVLDLNGLLVDIVASPYHRYRPDKMVSNKAVFKRPCCDEFLSFCFER-FNVGVWSRGSRKIW  558 (560)
Q Consensus       494 KKKLLVLDLDETLVHSSskpp~g~kPDfkV~~yyVyKRPhLDEFLdfVsE~-FEVVVWTSS~~kYV  558 (560)
                      .-+++||||||||+++...-    ..+... -..+..++.+  +|+++.+. |.++|-|+.....+
T Consensus        48 ~ik~viFDlDGTL~Ds~~~~----~~~~~~-~~~~~~~d~~--~L~~L~~~G~~l~I~T~~~~~~~  106 (211)
T 3ij5_A           48 NIRLLICDVDGVMSDGLIYM----GNQGEE-LKAFNVRDGY--GIRCLITSDIDVAIITGRRAKLL  106 (211)
T ss_dssp             TCSEEEECCTTTTSSSEEEE----ETTSCE-EEEEEHHHHH--HHHHHHHTTCEEEEECSSCCHHH
T ss_pred             CCCEEEEeCCCCEECCHHHH----hhhhHH-HHHhccchHH--HHHHHHHCCCEEEEEeCCCHHHH
Confidence            45899999999999974210    011000 0112233333  78888776 99999999876554

>2o2x_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; 1.50A {Mesorhizobium loti} SCOP: c.108.1.19

Probab=93.71  E-value=0.044  Score=47.68  Aligned_cols=53  Identities=21%  Similarity=0.147  Sum_probs=39.2

Q ss_pred             CCeEEEEecCcccccccCCCCCCCCCCeeeccceeEeCccHHHHHHHHHhc-cEEEEEccccc
Q 042646          494 KKKLLVLDLNGLLVDIVASPYHRYRPDKMVSNKAVFKRPCCDEFLSFCFER-FNVGVWSRGSR  555 (560)
Q Consensus       494 KKKLLVLDLDETLVHSSskpp~g~kPDfkV~~yyVyKRPhLDEFLdfVsE~-FEVVVWTSS~~  555 (560)
                      ..+++++|+||||+......     .+    .......|++.++|+++.+. |.++|.|....
T Consensus        30 ~~k~i~~D~DGtl~~~~~y~-----~~----~~~~~~~~g~~e~L~~L~~~G~~~~i~Tn~~~   83 (218)
T 2o2x_A           30 HLPALFLDRDGTINVDTDYP-----SD----PAEIVLRPQMLPAIATANRAGIPVVVVTNQSG   83 (218)
T ss_dssp             SCCCEEECSBTTTBCCCSCT-----TC----GGGCCBCGGGHHHHHHHHHHTCCEEEEEECHH
T ss_pred             cCCEEEEeCCCCcCCCCccc-----CC----cccCeECcCHHHHHHHHHHCCCEEEEEcCcCC
Confidence            46899999999999753110     00    11244679999999999876 99999998765

>3pgv_A Haloacid dehalogenase-like hydrolase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: EPE; 2.39A {Klebsiella pneumoniae subsp}

Probab=93.65  E-value=0.085  Score=47.57  Aligned_cols=18  Identities=22%  Similarity=0.316  Sum_probs=14.6

Q ss_pred             CCCeEEEEecCccccccc
Q 042646          493 SKKKLLVLDLNGLLVDIV  510 (560)
Q Consensus       493 ~KKKLLVLDLDETLVHSS  510 (560)
                      ...|++++||||||+++.
T Consensus        19 ~~~kli~~DlDGTLl~~~   36 (285)
T 3pgv_A           19 GMYQVVASDLDGTLLSPD   36 (285)
T ss_dssp             --CCEEEEECCCCCSCTT
T ss_pred             CcceEEEEeCcCCCCCCC
Confidence            368999999999999864

>3skx_A Copper-exporting P-type ATPase B; P1B-ATPase, ATP binding domain, copper(II) transporter, MEMB protein, hydrolase; 1.59A {Archaeoglobus fulgidus} PDB: 3sky_A*

Probab=93.62  E-value=0.05  Score=47.24  Aligned_cols=30  Identities=17%  Similarity=0.016  Sum_probs=25.6

Q ss_pred             EeCccHHHHHHHHHhc-cEEEEEcccccccc
Q 042646          529 FKRPCCDEFLSFCFER-FNVGVWSRGSRKIW  558 (560)
Q Consensus       529 yKRPhLDEFLdfVsE~-FEVVVWTSS~~kYV  558 (560)
                      ..+|++.++|+++.+. +.++|.|+....++
T Consensus       144 ~~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~  174 (280)
T 3skx_A          144 RIRPESREAISKLKAIGIKCMMLTGDNRFVA  174 (280)
T ss_dssp             EECTTHHHHHHHHHHTTCEEEEECSSCHHHH
T ss_pred             CCCHhHHHHHHHHHHCCCEEEEEeCCCHHHH
Confidence            5789999999999876 99999998876554

>4eze_A Haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 2.27A {Salmonella enterica subsp}

Probab=93.62  E-value=0.021  Score=54.40  Aligned_cols=32  Identities=16%  Similarity=0.114  Sum_probs=26.8

Q ss_pred             eeEeCccHHHHHHHHHhc-cEEEEEcccccccc
Q 042646          527 AVFKRPCCDEFLSFCFER-FNVGVWSRGSRKIW  558 (560)
Q Consensus       527 yVyKRPhLDEFLdfVsE~-FEVVVWTSS~~kYV  558 (560)
                      .+..+|++.++|+++.+. |.++|-|++...++
T Consensus       177 ~~~l~pg~~e~L~~Lk~~G~~v~IvSn~~~~~~  209 (317)
T 4eze_A          177 RMTLSPGLLTILPVIKAKGFKTAIISGGLDIFT  209 (317)
T ss_dssp             TCCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHH
T ss_pred             CCEECcCHHHHHHHHHhCCCEEEEEeCccHHHH
Confidence            356899999999999987 99999998766543

>1l7m_A Phosphoserine phosphatase; rossmann fold, four-helix bundle, B-hairpin, structural genomics, BSGC structure funded by NIH; 1.48A {Methanocaldococcus jannaschii} SCOP: c.108.1.4 PDB: 1f5s_A 1l7n_A 1l7p_A* 1l7o_A* 1j97_A*

Probab=93.59  E-value=0.03  Score=45.90  Aligned_cols=29  Identities=21%  Similarity=0.098  Sum_probs=23.1

Q ss_pred             EeCccHHHHHHHHHhc-cEEEEEccccccc
Q 042646          529 FKRPCCDEFLSFCFER-FNVGVWSRGSRKI  557 (560)
Q Consensus       529 yKRPhLDEFLdfVsE~-FEVVVWTSS~~kY  557 (560)
                      ...|++.++|+++.+. +.++|.|++...+
T Consensus        76 ~l~~~~~~~l~~l~~~g~~~~i~T~~~~~~  105 (211)
T 1l7m_A           76 TPTEGAEETIKELKNRGYVVAVVSGGFDIA  105 (211)
T ss_dssp             CBCTTHHHHHHHHHHTTEEEEEEEEEEHHH
T ss_pred             CCCccHHHHHHHHHHCCCEEEEEcCCcHHH
Confidence            3568999999999876 8899998765443

>3n07_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; structural genomics, phosphatase, PSI-2, protein structure initiative; HET: MSE; 1.76A {Vibrio cholerae}

Probab=93.55  E-value=0.017  Score=51.51  Aligned_cols=51  Identities=16%  Similarity=0.224  Sum_probs=34.4

Q ss_pred             CCeEEEEecCcccccccCCCCCCCCCCeeeccceeEeCccHHHH-------HHHHHhc-cEEEEEcccccccc
Q 042646          494 KKKLLVLDLNGLLVDIVASPYHRYRPDKMVSNKAVFKRPCCDEF-------LSFCFER-FNVGVWSRGSRKIW  558 (560)
Q Consensus       494 KKKLLVLDLDETLVHSSskpp~g~kPDfkV~~yyVyKRPhLDEF-------LdfVsE~-FEVVVWTSS~~kYV  558 (560)
                      +-++||||+||||++......    +          .++.+.+|       |+++.+. |.++|-|+.....+
T Consensus        24 ~ik~vifD~DGtL~d~~~~~~----~----------~~~~~~~~~~~d~~~l~~L~~~G~~~~ivT~~~~~~~   82 (195)
T 3n07_A           24 QIKLLICDVDGVFSDGLIYMG----N----------QGEELKTFHTRDGYGVKALMNAGIEIAIITGRRSQIV   82 (195)
T ss_dssp             TCCEEEECSTTTTSCSCCEEC----T----------TSCEECCCCTTHHHHHHHHHHTTCEEEEECSSCCHHH
T ss_pred             CCCEEEEcCCCCcCCCcEEEc----c----------CchhhheeecccHHHHHHHHHCCCEEEEEECcCHHHH
Confidence            467999999999998531100    0          12333334       8888766 99999998876554

>3r4c_A Hydrolase, haloacid dehalogenase-like hydrolase; haloalkanoate dehalogenase enzyme superfamily, phosphohydrol hydrolase; 1.82A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0

Probab=93.31  E-value=0.1  Score=45.98  Aligned_cols=15  Identities=40%  Similarity=0.755  Sum_probs=13.7

Q ss_pred             CeEEEEecCcccccc
Q 042646          495 KKLLVLDLNGLLVDI  509 (560)
Q Consensus       495 KKLLVLDLDETLVHS  509 (560)
                      -|++++||||||++.
T Consensus        12 iKli~~DlDGTLl~~   26 (268)
T 3r4c_A           12 IKVLLLDVDGTLLSF   26 (268)
T ss_dssp             CCEEEECSBTTTBCT
T ss_pred             eEEEEEeCCCCCcCC
Confidence            589999999999984

>2fue_A PMM 1, PMMH-22, phosphomannomutase 1; enzyme-product complex, protein glycosyl carbohydrate-deficient glycoprotein syndrome; HET: MSE M1P; 1.75A {Homo sapiens} SCOP: c.108.1.10 PDB: 2fuc_A*

Probab=92.64  E-value=0.11  Score=46.85  Aligned_cols=17  Identities=24%  Similarity=0.452  Sum_probs=14.5

Q ss_pred             CCeEEEEecCccccccc
Q 042646          494 KKKLLVLDLNGLLVDIV  510 (560)
Q Consensus       494 KKKLLVLDLDETLVHSS  510 (560)
                      ..||+++||||||++..
T Consensus        12 ~~kli~~DlDGTLl~~~   28 (262)
T 2fue_A           12 ERVLCLFDVDGTLTPAR   28 (262)
T ss_dssp             -CEEEEEESBTTTBSTT
T ss_pred             CeEEEEEeCccCCCCCC
Confidence            57999999999999864

>3n1u_A Hydrolase, HAD superfamily, subfamily III A; structural genomics, PSI-2; 1.80A {Legionella pneumophila} SCOP: c.108.1.0

Probab=92.29  E-value=0.044  Score=47.86  Aligned_cols=51  Identities=20%  Similarity=0.275  Sum_probs=33.0

Q ss_pred             CCeEEEEecCcccccccCCCCCCCCCCeeeccceeEeCccHHHH-------HHHHHhc-cEEEEEcccccccc
Q 042646          494 KKKLLVLDLNGLLVDIVASPYHRYRPDKMVSNKAVFKRPCCDEF-------LSFCFER-FNVGVWSRGSRKIW  558 (560)
Q Consensus       494 KKKLLVLDLDETLVHSSskpp~g~kPDfkV~~yyVyKRPhLDEF-------LdfVsE~-FEVVVWTSS~~kYV  558 (560)
                      +-++++||+||||++.....    .++          .|.+.+|       |+++.+. |.++|.|......+
T Consensus        18 ~ik~vifD~DGtL~~~~~~~----~~~----------~~~~~~~~~~d~~~l~~L~~~g~~~~ivTn~~~~~~   76 (191)
T 3n1u_A           18 KIKCLICDVDGVLSDGLLHI----DNH----------GNELKSFHVQDGMGLKLLMAAGIQVAIITTAQNAVV   76 (191)
T ss_dssp             TCSEEEECSTTTTBCSCCEE----CTT----------CCEECCBCHHHHHHHHHHHHTTCEEEEECSCCSHHH
T ss_pred             cCCEEEEeCCCCCCCCceee----cCC----------chhhhhccccChHHHHHHHHCCCeEEEEeCcChHHH
Confidence            45799999999999842110    010          1222333       7888766 99999998766543

>2r8e_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; YRBI, divalent metal, HAD superfamily, KDO 8-P, hydrolase; 1.40A {Escherichia coli O6} PDB: 2r8x_A 2r8y_A 2r8z_A 3hyc_A 3i6b_A*

Probab=91.49  E-value=0.11  Score=44.67  Aligned_cols=58  Identities=21%  Similarity=0.229  Sum_probs=34.2

Q ss_pred             CCeEEEEecCcccccccCCCCCCCCCCeeeccceeEeCccHHHHHHHHHhc-cEEEEEcccccccc
Q 042646          494 KKKLLVLDLNGLLVDIVASPYHRYRPDKMVSNKAVFKRPCCDEFLSFCFER-FNVGVWSRGSRKIW  558 (560)
Q Consensus       494 KKKLLVLDLDETLVHSSskpp~g~kPDfkV~~yyVyKRPhLDEFLdfVsE~-FEVVVWTSS~~kYV  558 (560)
                      .-++++||+||||++....    +.++.... ..+..++  ..+|+++.+. +.++|-|......+
T Consensus        25 ~ik~vifD~DGTL~~~~~~----~~~~~~~~-~~~~~~d--~~~l~~L~~~g~~v~ivT~~~~~~~   83 (188)
T 2r8e_A           25 NIRLLILDVDGVLSDGLIY----MGNNGEEL-KAFNVRD--GYGIRCALTSDIEVAIITGRKAKLV   83 (188)
T ss_dssp             TCSEEEECCCCCCBCSEEE----EETTSCEE-EEEEHHH--HHHHHHHHTTTCEEEEECSSCCHHH
T ss_pred             cCCEEEEeCCCCcCCCCEE----ecCCCcEE-EEeeccc--HHHHHHHHHCCCeEEEEeCCChHHH
Confidence            5689999999999984210    00110000 0111111  1378888876 99999998766543

>2hx1_A Predicted sugar phosphatases of the HAD superfamily; ZP_00311070.1, possible sugar phosphatase, structural genomics; HET: MSE EPE; 2.10A {Cytophaga hutchinsonii}

Probab=91.47  E-value=0.17  Score=45.29  Aligned_cols=41  Identities=15%  Similarity=0.189  Sum_probs=27.9

Q ss_pred             CCeEEEEecCcccccccCCCCCCCCCCeeeccceeEeCccHHHHHHHHHhc-cEEEEEcc
Q 042646          494 KKKLLVLDLNGLLVDIVASPYHRYRPDKMVSNKAVFKRPCCDEFLSFCFER-FNVGVWSR  552 (560)
Q Consensus       494 KKKLLVLDLDETLVHSSskpp~g~kPDfkV~~yyVyKRPhLDEFLdfVsE~-FEVVVWTS  552 (560)
                      .-|++++||||||++..                .+  -|+..++|+.+.+. +.|++.|.
T Consensus        13 ~~k~i~~D~DGtL~~~~----------------~~--~~~~~~~l~~l~~~g~~~~~~Tn   54 (284)
T 2hx1_A           13 KYKCIFFDAFGVLKTYN----------------GL--LPGIENTFDYLKAQGQDYYIVTN   54 (284)
T ss_dssp             GCSEEEECSBTTTEETT----------------EE--CTTHHHHHHHHHHTTCEEEEEEC
T ss_pred             cCCEEEEcCcCCcCcCC----------------ee--ChhHHHHHHHHHHCCCEEEEEeC
Confidence            36899999999999852                11  15666677666544 66666663

>3dao_A Putative phosphatse; structural genomics, joint center for S genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE 1PE CIT; 1.80A {Eubacterium rectale}

Probab=91.30  E-value=0.24  Score=44.73  Aligned_cols=19  Identities=32%  Similarity=0.398  Sum_probs=16.0

Q ss_pred             CCCeEEEEecCcccccccC
Q 042646          493 SKKKLLVLDLNGLLVDIVA  511 (560)
Q Consensus       493 ~KKKLLVLDLDETLVHSSs  511 (560)
                      ...|++++||||||+++..
T Consensus        19 ~~~kli~~DlDGTLl~~~~   37 (283)
T 3dao_A           19 GMIKLIATDIDGTLVKDGS   37 (283)
T ss_dssp             CCCCEEEECCBTTTBSTTC
T ss_pred             cCceEEEEeCcCCCCCCCC
Confidence            4679999999999998643

>3l7y_A Putative uncharacterized protein SMU.1108C; hydrolase; 2.00A {Streptococcus mutans}

Probab=91.14  E-value=0.17  Score=46.26  Aligned_cols=16  Identities=19%  Similarity=0.468  Sum_probs=14.4

Q ss_pred             CeEEEEecCccccccc
Q 042646          495 KKLLVLDLNGLLVDIV  510 (560)
Q Consensus       495 KKLLVLDLDETLVHSS  510 (560)
                      .|++++||||||+++.
T Consensus        37 iKli~fDlDGTLld~~   52 (304)
T 3l7y_A           37 VKVIATDMDGTFLNSK   52 (304)
T ss_dssp             CSEEEECCCCCCSCTT
T ss_pred             eEEEEEeCCCCCCCCC
Confidence            6899999999999874

>1vjr_A 4-nitrophenylphosphatase; TM1742, structural genomics, JCSG, protein structure initiative, joint center for structural G hydrolase; 2.40A {Thermotoga maritima} SCOP: c.108.1.14 PDB: 1pw5_A*

Probab=91.08  E-value=0.21  Score=43.89  Aligned_cols=16  Identities=31%  Similarity=0.490  Sum_probs=14.4

Q ss_pred             CCeEEEEecCcccccc
Q 042646          494 KKKLLVLDLNGLLVDI  509 (560)
Q Consensus       494 KKKLLVLDLDETLVHS  509 (560)
                      .-+++++||||||++.
T Consensus        16 ~~~~v~~DlDGTLl~~   31 (271)
T 1vjr_A           16 KIELFILDMDGTFYLD   31 (271)
T ss_dssp             GCCEEEECCBTTTEET
T ss_pred             CCCEEEEcCcCcEEeC
Confidence            5688999999999986

>2c4n_A Protein NAGD; nucleotide phosphatase, HAD superfamily, UMP phosphatase, carbohydrate metabolism, hydrolase; 1.8A {Escherichia coli} SCOP: c.108.1.14

Probab=90.97  E-value=0.075  Score=44.36  Aligned_cols=16  Identities=25%  Similarity=0.409  Sum_probs=13.9

Q ss_pred             CeEEEEecCccccccc
Q 042646          495 KKLLVLDLNGLLVDIV  510 (560)
Q Consensus       495 KKLLVLDLDETLVHSS  510 (560)
                      -|++++||||||+++.
T Consensus         3 ~k~i~fDlDGTLl~~~   18 (250)
T 2c4n_A            3 IKNVICDIDGVLMHDN   18 (250)
T ss_dssp             CCEEEEECBTTTEETT
T ss_pred             ccEEEEcCcceEEeCC
Confidence            4799999999999863

>1q92_A 5(3)-deoxyribonucleotidase; alpha-beta rossman fold, hydrolase; HET: DRM; 1.40A {Homo sapiens} SCOP: c.108.1.8 PDB: 1mh9_A* 1q91_A* 1z4m_A* 1z4i_A* 1z4j_A* 1z4l_A* 1z4k_A* 1z4p_X* 1z4q_A* 2jau_A* 2jaw_A* 3u19_A* 3u13_A 4e88_A

Probab=90.79  E-value=0.081  Score=45.32  Aligned_cols=31  Identities=10%  Similarity=-0.084  Sum_probs=26.6

Q ss_pred             eEeCccHHHHHHHHHh--ccEEEEEcccccccc
Q 042646          528 VFKRPCCDEFLSFCFE--RFNVGVWSRGSRKIW  558 (560)
Q Consensus       528 VyKRPhLDEFLdfVsE--~FEVVVWTSS~~kYV  558 (560)
                      +...|++.++|+++.+  .|.++|.|++...++
T Consensus        74 ~~~~~g~~e~L~~L~~~~g~~~~ivT~~~~~~~  106 (197)
T 1q92_A           74 LEPLPGAVEAVKEMASLQNTDVFICTSPIKMFK  106 (197)
T ss_dssp             CCBCTTHHHHHHHHHHSTTEEEEEEECCCSCCS
T ss_pred             CCcCcCHHHHHHHHHhcCCCeEEEEeCCccchH
Confidence            4567999999999998  499999999987664

>3bwv_A Putative 5'(3')-deoxyribonucleotidase; NP_764060.1, deoxyribonucleotidase-like protein; HET: MSE; 1.55A {Staphylococcus epidermidis}

Probab=90.69  E-value=0.083  Score=44.34  Aligned_cols=27  Identities=11%  Similarity=0.127  Sum_probs=23.5

Q ss_pred             eEeCccHHHHHHHHHhccEEEEEcccc
Q 042646          528 VFKRPCCDEFLSFCFERFNVGVWSRGS  554 (560)
Q Consensus       528 VyKRPhLDEFLdfVsE~FEVVVWTSS~  554 (560)
                      +...|++.++|+++.+.|.++|-|++.
T Consensus        68 ~~~~pg~~e~L~~L~~~~~~~i~T~~~   94 (180)
T 3bwv_A           68 LDVMPHAQEVVKQLNEHYDIYIATAAM   94 (180)
T ss_dssp             CCBCTTHHHHHHHHTTTSEEEEEECC-
T ss_pred             CCCCcCHHHHHHHHHhcCCEEEEeCCC
Confidence            456799999999999889999999983

>3gyg_A NTD biosynthesis operon putative hydrolase NTDB; PF05116, PF08282, MCSG, PSI-2, haloacid dehalogenase-like HY structural genomics; 2.45A {Bacillus subtilis subsp}

Probab=90.62  E-value=0.093  Score=47.12  Aligned_cols=16  Identities=6%  Similarity=0.127  Sum_probs=14.5

Q ss_pred             CCeEEEEecCcccccc
Q 042646          494 KKKLLVLDLNGLLVDI  509 (560)
Q Consensus       494 KKKLLVLDLDETLVHS  509 (560)
                      ..+++++||||||+++
T Consensus        21 ~~kliifDlDGTLlds   36 (289)
T 3gyg_A           21 PQYIVFCDFDETYFPH   36 (289)
T ss_dssp             CSEEEEEETBTTTBCS
T ss_pred             CCeEEEEECCCCCcCC
Confidence            4789999999999994

>4ex6_A ALNB; modified rossman fold, phosphatase, magnesium binding, hydro; 1.25A {Streptomyces SP} PDB: 4ex7_A

Probab=90.62  E-value=0.099  Score=44.08  Aligned_cols=31  Identities=16%  Similarity=-0.014  Sum_probs=25.6

Q ss_pred             eEeCccHHHHHHHHHhc-cEEEEEcccccccc
Q 042646          528 VFKRPCCDEFLSFCFER-FNVGVWSRGSRKIW  558 (560)
Q Consensus       528 VyKRPhLDEFLdfVsE~-FEVVVWTSS~~kYV  558 (560)
                      +...|++.+||+++.+. |.++|.|.+...++
T Consensus       103 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~  134 (237)
T 4ex6_A          103 RLLYPGVLEGLDRLSAAGFRLAMATSKVEKAA  134 (237)
T ss_dssp             GGBCTTHHHHHHHHHHTTEEEEEECSSCHHHH
T ss_pred             CccCCCHHHHHHHHHhCCCcEEEEcCCChHHH
Confidence            34789999999999986 99999998876543

>3fzq_A Putative hydrolase; YP_001086940.1, putative haloacid dehalogenase-like hydrolas structural genomics, joint center for structural genomics; HET: MSE; 2.10A {Clostridium difficile} SCOP: c.108.1.0

Probab=90.59  E-value=0.081  Score=46.23  Aligned_cols=16  Identities=56%  Similarity=0.804  Sum_probs=14.3

Q ss_pred             CeEEEEecCccccccc
Q 042646          495 KKLLVLDLNGLLVDIV  510 (560)
Q Consensus       495 KKLLVLDLDETLVHSS  510 (560)
                      .|++++||||||+++.
T Consensus         5 ~kli~fDlDGTLl~~~   20 (274)
T 3fzq_A            5 YKLLILDIDGTLRDEV   20 (274)
T ss_dssp             CCEEEECSBTTTBBTT
T ss_pred             ceEEEEECCCCCCCCC
Confidence            5899999999999864

>2go7_A Hydrolase, haloacid dehalogenase-like family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.10A {Streptococcus pneumoniae} SCOP: c.108.1.6

Probab=90.51  E-value=0.08  Score=42.55  Aligned_cols=30  Identities=17%  Similarity=0.244  Sum_probs=25.0

Q ss_pred             eeEeCccHHHHHHHHHhc-cEEEEEcccccc
Q 042646          527 AVFKRPCCDEFLSFCFER-FNVGVWSRGSRK  556 (560)
Q Consensus       527 yVyKRPhLDEFLdfVsE~-FEVVVWTSS~~k  556 (560)
                      .+..+|++.++|+++.+. +.++|+|+....
T Consensus        83 ~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~  113 (207)
T 2go7_A           83 QVVLMPGAREVLAWADESGIQQFIYTHKGNN  113 (207)
T ss_dssp             GCEECTTHHHHHHHHHHTTCEEEEECSSCTH
T ss_pred             cceeCcCHHHHHHHHHHCCCeEEEEeCCchH
Confidence            355789999999999886 999999987654

>2fi1_A Hydrolase, haloacid dehalogenase-like family; structural genomics, haloacid dehalogenase-like F PSI, protein structure initiative; 1.40A {Streptococcus pneumoniae} SCOP: c.108.1.3

Probab=90.43  E-value=0.078  Score=43.18  Aligned_cols=25  Identities=8%  Similarity=-0.192  Sum_probs=22.0

Q ss_pred             eCccHHHHHHHHHhc-cEEEEEcccc
Q 042646          530 KRPCCDEFLSFCFER-FNVGVWSRGS  554 (560)
Q Consensus       530 KRPhLDEFLdfVsE~-FEVVVWTSS~  554 (560)
                      .+|++.++|+++.+. +.++|.|+..
T Consensus        83 ~~~~~~~~l~~l~~~g~~~~i~t~~~  108 (190)
T 2fi1_A           83 LFEGVSDLLEDISNQGGRHFLVSHRN  108 (190)
T ss_dssp             BCTTHHHHHHHHHHTTCEEEEECSSC
T ss_pred             cCcCHHHHHHHHHHCCCcEEEEECCc
Confidence            689999999999876 9999999764

>3d6j_A Putative haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343}

Probab=90.37  E-value=0.091  Score=43.13  Aligned_cols=30  Identities=17%  Similarity=0.074  Sum_probs=24.2

Q ss_pred             eEeCccHHHHHHHHHhc-cEEEEEccccccc
Q 042646          528 VFKRPCCDEFLSFCFER-FNVGVWSRGSRKI  557 (560)
Q Consensus       528 VyKRPhLDEFLdfVsE~-FEVVVWTSS~~kY  557 (560)
                      +...|++.+||+++.+. +.++|.|.....+
T Consensus        88 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~  118 (225)
T 3d6j_A           88 TILFPDTLPTLTHLKKQGIRIGIISTKYRFR  118 (225)
T ss_dssp             CEECTTHHHHHHHHHHHTCEEEEECSSCHHH
T ss_pred             CccCcCHHHHHHHHHHCCCeEEEEECCCHHH
Confidence            45689999999999865 8999999876544

>2hcf_A Hydrolase, haloacid dehalogenase-like family; NP_662590.1, ST genomics, PSI-2, protein structure initiative; 1.80A {Chlorobaculum tepidum} SCOP: c.108.1.6

Probab=90.34  E-value=0.086  Score=44.03  Aligned_cols=30  Identities=13%  Similarity=0.059  Sum_probs=25.7

Q ss_pred             eEeCccHHHHHHHHHhc--cEEEEEccccccc
Q 042646          528 VFKRPCCDEFLSFCFER--FNVGVWSRGSRKI  557 (560)
Q Consensus       528 VyKRPhLDEFLdfVsE~--FEVVVWTSS~~kY  557 (560)
                      +...|++.++|+++.+.  +.++|.|++...+
T Consensus        92 ~~~~~~~~~~l~~l~~~~g~~~~i~t~~~~~~  123 (234)
T 2hcf_A           92 ITLLEGVRELLDALSSRSDVLLGLLTGNFEAS  123 (234)
T ss_dssp             EEECTTHHHHHHHHHTCTTEEEEEECSSCHHH
T ss_pred             CCcCCCHHHHHHHHHhCCCceEEEEcCCcHHH
Confidence            56789999999999986  9999999887654

>3e58_A Putative beta-phosphoglucomutase; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.86A {Streptococcus thermophilus lmg 18311}

Probab=90.33  E-value=0.099  Score=42.41  Aligned_cols=31  Identities=13%  Similarity=0.054  Sum_probs=26.0

Q ss_pred             eEeCccHHHHHHHHHhc-cEEEEEcccccccc
Q 042646          528 VFKRPCCDEFLSFCFER-FNVGVWSRGSRKIW  558 (560)
Q Consensus       528 VyKRPhLDEFLdfVsE~-FEVVVWTSS~~kYV  558 (560)
                      +..+|++.++|+++.+. +.++|.|++...++
T Consensus        88 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~  119 (214)
T 3e58_A           88 ELIFPDVLKVLNEVKSQGLEIGLASSSVKADI  119 (214)
T ss_dssp             HHBCTTHHHHHHHHHHTTCEEEEEESSCHHHH
T ss_pred             CCcCchHHHHHHHHHHCCCCEEEEeCCcHHHH
Confidence            35789999999999987 99999998876543

>2wf7_A Beta-PGM, beta-phosphoglucomutase; transition state analogue, haloacid dehalogenase superfamily, isomerase, phosphotransferase; HET: G7P; 1.05A {Lactococcus lactis} PDB: 1o03_A* 1z4n_A* 1z4o_A* 1zol_A 2wf5_A* 2wf6_A* 1o08_A* 2wf8_A* 2wf9_A* 2wfa_A 2whe_A 1lvh_A* 3fm9_A

Probab=90.33  E-value=0.082  Score=43.61  Aligned_cols=26  Identities=12%  Similarity=-0.032  Sum_probs=21.6

Q ss_pred             eEeCccHHHHHHHHHhc-cEEEEEccc
Q 042646          528 VFKRPCCDEFLSFCFER-FNVGVWSRG  553 (560)
Q Consensus       528 VyKRPhLDEFLdfVsE~-FEVVVWTSS  553 (560)
                      +..+|++.++|+++.+. +.++|.|++
T Consensus        90 ~~~~~~~~~~l~~l~~~g~~~~i~t~~  116 (221)
T 2wf7_A           90 ADVYPGILQLLKDLRSNKIKIALASAS  116 (221)
T ss_dssp             GGBCTTHHHHHHHHHHTTCEEEECCCC
T ss_pred             CCCCCCHHHHHHHHHHCCCeEEEEcCc
Confidence            34679999999999876 899999876

>2amy_A PMM 2, phosphomannomutase 2; HS.459855, HS.313504, BC008310, phosphatase, PFAM PF03332, H superfamily, jaecken disease; 2.09A {Homo sapiens} SCOP: c.108.1.10 PDB: 2q4r_A

Probab=90.18  E-value=0.11  Score=45.88  Aligned_cols=17  Identities=24%  Similarity=0.341  Sum_probs=15.1

Q ss_pred             CCeEEEEecCccccccc
Q 042646          494 KKKLLVLDLNGLLVDIV  510 (560)
Q Consensus       494 KKKLLVLDLDETLVHSS  510 (560)
                      ++||+++||||||+...
T Consensus         5 ~~kli~~DlDGTLl~~~   21 (246)
T 2amy_A            5 GPALCLFDVDGTLTAPR   21 (246)
T ss_dssp             CSEEEEEESBTTTBCTT
T ss_pred             CceEEEEECCCCcCCCC
Confidence            57999999999999864

>4dw8_A Haloacid dehalogenase-like hydrolase; HAD, putative phosphatase, enzyme function initiative, EFI, structural genomics; 1.50A {Bacteroides thetaiotaomicron} PDB: 3niw_A 4dwo_A

Probab=90.15  E-value=0.098  Score=46.31  Aligned_cols=17  Identities=47%  Similarity=0.663  Sum_probs=14.7

Q ss_pred             CeEEEEecCcccccccC
Q 042646          495 KKLLVLDLNGLLVDIVA  511 (560)
Q Consensus       495 KKLLVLDLDETLVHSSs  511 (560)
                      .|++++||||||+++..
T Consensus         5 ~kli~fDlDGTLl~~~~   21 (279)
T 4dw8_A            5 YKLIVLDLDGTLTNSKK   21 (279)
T ss_dssp             CCEEEECCCCCCSCTTS
T ss_pred             ceEEEEeCCCCCCCCCC
Confidence            68999999999998643

>3ddh_A Putative haloacid dehalogenase-like family hydrol; hydrolase, HAD superfamily, ST genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides thetaiotaomicron}

Probab=90.14  E-value=0.094  Score=43.14  Aligned_cols=30  Identities=20%  Similarity=0.149  Sum_probs=24.6

Q ss_pred             eEeCccHHHHHHHHHh--ccEEEEEccccccc
Q 042646          528 VFKRPCCDEFLSFCFE--RFNVGVWSRGSRKI  557 (560)
Q Consensus       528 VyKRPhLDEFLdfVsE--~FEVVVWTSS~~kY  557 (560)
                      +...|++.+||+++.+  .|.++|.|.+....
T Consensus       104 ~~~~~~~~~~l~~l~~~g~~~~~i~t~~~~~~  135 (234)
T 3ddh_A          104 IELLPGVKETLKTLKETGKYKLVVATKGDLLD  135 (234)
T ss_dssp             CCBCTTHHHHHHHHHHHCCCEEEEEEESCHHH
T ss_pred             CCcCccHHHHHHHHHhCCCeEEEEEeCCchHH
Confidence            4568999999999988  69999999766543

>1te2_A Putative phosphatase; structural genomics, phosphates, PSI, protein S initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Escherichia coli} SCOP: c.108.1.6

Probab=90.06  E-value=0.097  Score=43.00  Aligned_cols=30  Identities=23%  Similarity=0.282  Sum_probs=24.4

Q ss_pred             eEeCccHHHHHHHHHhc-cEEEEEccccccc
Q 042646          528 VFKRPCCDEFLSFCFER-FNVGVWSRGSRKI  557 (560)
Q Consensus       528 VyKRPhLDEFLdfVsE~-FEVVVWTSS~~kY  557 (560)
                      +...|++.++|+++.+. +.++|.|.....+
T Consensus        93 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~  123 (226)
T 1te2_A           93 RPLLPGVREAVALCKEQGLLVGLASASPLHM  123 (226)
T ss_dssp             CCBCTTHHHHHHHHHHTTCEEEEEESSCHHH
T ss_pred             CCcCccHHHHHHHHHHCCCcEEEEeCCcHHH
Confidence            45679999999999876 9999999876544

>3nuq_A Protein SSM1, putative nucleotide phosphatase; suppresses the 6-AU sensitivity of transcription elongation II; 1.70A {Saccharomyces cerevisiae} PDB: 3onn_A 3opx_A*

Probab=90.01  E-value=0.19  Score=44.36  Aligned_cols=30  Identities=3%  Similarity=-0.103  Sum_probs=25.0

Q ss_pred             eEeCccHHHHHHHHHhc-c--EEEEEccccccc
Q 042646          528 VFKRPCCDEFLSFCFER-F--NVGVWSRGSRKI  557 (560)
Q Consensus       528 VyKRPhLDEFLdfVsE~-F--EVVVWTSS~~kY  557 (560)
                      +...|++.+||+++.+. |  .++|.|.+...+
T Consensus       141 ~~~~p~~~~~L~~L~~~g~~~~l~i~Tn~~~~~  173 (282)
T 3nuq_A          141 LKPDIPLRNMLLRLRQSGKIDKLWLFTNAYKNH  173 (282)
T ss_dssp             CCCCHHHHHHHHHHHHSSSCSEEEEECSSCHHH
T ss_pred             cCcChhHHHHHHHHHhCCCCceEEEEECCChHH
Confidence            55789999999999875 8  999999876544

>3dnp_A Stress response protein YHAX; structural PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, unknown function; HET: MSE; 1.85A {Bacillus subtilis} SCOP: c.108.1.0

Probab=90.01  E-value=0.093  Score=46.72  Aligned_cols=17  Identities=35%  Similarity=0.616  Sum_probs=14.7

Q ss_pred             CeEEEEecCcccccccC
Q 042646          495 KKLLVLDLNGLLVDIVA  511 (560)
Q Consensus       495 KKLLVLDLDETLVHSSs  511 (560)
                      .|++++||||||+++..
T Consensus         6 ~kli~fDlDGTLl~~~~   22 (290)
T 3dnp_A            6 KQLLALNIDGALLRSNG   22 (290)
T ss_dssp             CCEEEECCCCCCSCTTS
T ss_pred             ceEEEEcCCCCCCCCCC
Confidence            58999999999998643

>3kd3_A Phosphoserine phosphohydrolase-like protein; csgid, niaid, S genomics, national institute of allergy and infectious DISE (niaid); 1.70A {Francisella tularensis subsp}

Probab=89.98  E-value=0.11  Score=42.55  Aligned_cols=30  Identities=13%  Similarity=0.170  Sum_probs=24.9

Q ss_pred             EeCccHHHHHHHHHhc-cEEEEEcccccccc
Q 042646          529 FKRPCCDEFLSFCFER-FNVGVWSRGSRKIW  558 (560)
Q Consensus       529 yKRPhLDEFLdfVsE~-FEVVVWTSS~~kYV  558 (560)
                      ..+|++.++|+++.+. |.++|.|++...++
T Consensus        82 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~  112 (219)
T 3kd3_A           82 LLTDGIKELVQDLKNKGFEIWIFSGGLSESI  112 (219)
T ss_dssp             TBCTTHHHHHHHHHHTTCEEEEEEEEEHHHH
T ss_pred             cCChhHHHHHHHHHHCCCeEEEEcCCcHHHH
Confidence            3779999999999877 99999998765543

>3mc1_A Predicted phosphatase, HAD family; PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.93A {Clostridium acetobutylicum} SCOP: c.108.1.0

Probab=89.86  E-value=0.1  Score=43.52  Aligned_cols=30  Identities=13%  Similarity=-0.024  Sum_probs=25.2

Q ss_pred             eEeCccHHHHHHHHHhc-cEEEEEccccccc
Q 042646          528 VFKRPCCDEFLSFCFER-FNVGVWSRGSRKI  557 (560)
Q Consensus       528 VyKRPhLDEFLdfVsE~-FEVVVWTSS~~kY  557 (560)
                      +...|++.+||+++.+. |.++|.|++...+
T Consensus        85 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~  115 (226)
T 3mc1_A           85 NKVYDGIEALLSSLKDYGFHLVVATSKPTVF  115 (226)
T ss_dssp             CCBCTTHHHHHHHHHHHTCEEEEEEEEEHHH
T ss_pred             CccCcCHHHHHHHHHHCCCeEEEEeCCCHHH
Confidence            45789999999999887 9999999876544

>2oyc_A PLP phosphatase, pyridoxal phosphate phosphatase; structural genomics, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI-2; 1.72A {Homo sapiens} PDB: 2p27_A 2p69_A* 2cft_A* 2cfs_A 2cfr_A*

Probab=89.79  E-value=0.32  Score=44.44  Aligned_cols=40  Identities=18%  Similarity=0.113  Sum_probs=27.8

Q ss_pred             CCeEEEEecCcccccccCCCCCCCCCCeeeccceeEeCccHHHHHHHHHhc-cEEEEEc
Q 042646          494 KKKLLVLDLNGLLVDIVASPYHRYRPDKMVSNKAVFKRPCCDEFLSFCFER-FNVGVWS  551 (560)
Q Consensus       494 KKKLLVLDLDETLVHSSskpp~g~kPDfkV~~yyVyKRPhLDEFLdfVsE~-FEVVVWT  551 (560)
                      .-|++++||||||++..                .+  -|...++|+.+.+. +.+++.|
T Consensus        20 ~~k~i~~D~DGTL~~~~----------------~~--~~~~~~~l~~l~~~g~~~~~~T   60 (306)
T 2oyc_A           20 RAQGVLFDCDGVLWNGE----------------RA--VPGAPELLERLARAGKAALFVS   60 (306)
T ss_dssp             HCSEEEECSBTTTEETT----------------EE--CTTHHHHHHHHHHTTCEEEEEE
T ss_pred             hCCEEEECCCCcEecCC----------------cc--CcCHHHHHHHHHHCCCeEEEEE
Confidence            35799999999999742                11  25566777776654 6677777

>2om6_A Probable phosphoserine phosphatase; rossmann fold, B-hairpin, four-helix bundle, structural GENO NPPSFA; 2.20A {Pyrococcus horikoshii}

Probab=89.79  E-value=0.096  Score=43.44  Aligned_cols=25  Identities=24%  Similarity=0.162  Sum_probs=21.9

Q ss_pred             eCccHHHHHHHHHhc-cEEEEEcccc
Q 042646          530 KRPCCDEFLSFCFER-FNVGVWSRGS  554 (560)
Q Consensus       530 KRPhLDEFLdfVsE~-FEVVVWTSS~  554 (560)
                      ..|++.++|+++.+. +.++|.|++.
T Consensus       100 ~~~~~~~~l~~l~~~g~~~~i~t~~~  125 (235)
T 2om6_A          100 VLEGTKEALQFVKERGLKTAVIGNVM  125 (235)
T ss_dssp             BCTTHHHHHHHHHHTTCEEEEEECCC
T ss_pred             cCccHHHHHHHHHHCCCEEEEEcCCc
Confidence            389999999999877 9999999876

>3mpo_A Predicted hydrolase of the HAD superfamily; SGX, PSI, structural genomics, protein structure initiative; 2.90A {Lactobacillus brevis} SCOP: c.108.1.0

Probab=89.66  E-value=0.09  Score=46.53  Aligned_cols=16  Identities=31%  Similarity=0.613  Sum_probs=7.3

Q ss_pred             CeEEEEecCccccccc
Q 042646          495 KKLLVLDLNGLLVDIV  510 (560)
Q Consensus       495 KKLLVLDLDETLVHSS  510 (560)
                      -|++++||||||+++.
T Consensus         5 ~kli~~DlDGTLl~~~   20 (279)
T 3mpo_A            5 IKLIAIDIDGTLLNEK   20 (279)
T ss_dssp             CCEEEECC--------
T ss_pred             eEEEEEcCcCCCCCCC
Confidence            5899999999999864

>2pke_A Haloacid delahogenase-like family hydrolase; NP_639141.1, ST genomics, joint center for structural genomics, JCSG; 1.81A {Xanthomonas campestris PV}

Probab=89.62  E-value=0.11  Score=44.88  Aligned_cols=30  Identities=13%  Similarity=0.004  Sum_probs=24.2

Q ss_pred             eEeCccHHHHHHHHHhccEEEEEccccccc
Q 042646          528 VFKRPCCDEFLSFCFERFNVGVWSRGSRKI  557 (560)
Q Consensus       528 VyKRPhLDEFLdfVsE~FEVVVWTSS~~kY  557 (560)
                      +...|++.++|+++...|.++|.|++...+
T Consensus       111 ~~~~~~~~~~l~~l~~~~~~~i~t~~~~~~  140 (251)
T 2pke_A          111 VEVIAGVREAVAAIAADYAVVLITKGDLFH  140 (251)
T ss_dssp             CCBCTTHHHHHHHHHTTSEEEEEEESCHHH
T ss_pred             CCcCccHHHHHHHHHCCCEEEEEeCCCHHH
Confidence            456799999999998669999999876543

>2p11_A Hypothetical protein; putative haloacid dehalogenase-like hydrolase, structural GE joint center for structural genomics, JCSG; 2.20A {Burkholderia xenovorans}

Probab=89.55  E-value=0.13  Score=44.49  Aligned_cols=31  Identities=16%  Similarity=-0.091  Sum_probs=25.5

Q ss_pred             eEeCccHHHHHHHHHhccEEEEEcccccccc
Q 042646          528 VFKRPCCDEFLSFCFERFNVGVWSRGSRKIW  558 (560)
Q Consensus       528 VyKRPhLDEFLdfVsE~FEVVVWTSS~~kYV  558 (560)
                      +...|++.++|+++.+...++|-|++...++
T Consensus        95 ~~~~~g~~~~l~~l~~~g~~~i~Tn~~~~~~  125 (231)
T 2p11_A           95 SRVYPGALNALRHLGARGPTVILSDGDVVFQ  125 (231)
T ss_dssp             GGBCTTHHHHHHHHHTTSCEEEEEECCSSHH
T ss_pred             CCcCccHHHHHHHHHhCCCEEEEeCCCHHHH
Confidence            4568999999999998778889998877654

>2fdr_A Conserved hypothetical protein; SAD, structural genomics, agrobacter tumefaciens, HAD-superfamily hydrolase; 2.00A {Agrobacterium tumefaciens str} SCOP: c.108.1.6

Probab=89.54  E-value=0.11  Score=43.25  Aligned_cols=16  Identities=38%  Similarity=0.652  Sum_probs=13.8

Q ss_pred             CeEEEEecCccccccc
Q 042646          495 KKLLVLDLNGLLVDIV  510 (560)
Q Consensus       495 KKLLVLDLDETLVHSS  510 (560)
                      .|++++||||||++..
T Consensus         4 ik~i~fDlDGTL~d~~   19 (229)
T 2fdr_A            4 FDLIIFDCDGVLVDSE   19 (229)
T ss_dssp             CSEEEECSBTTTBCCH
T ss_pred             ccEEEEcCCCCcCccH
Confidence            4799999999999853

>2b30_A Pvivax hypothetical protein; SGPP, structural genomics, PSI, protein structure initiative; 2.70A {Plasmodium vivax} SCOP: c.108.1.10

Probab=89.38  E-value=0.28  Score=45.57  Aligned_cols=15  Identities=40%  Similarity=0.563  Sum_probs=13.8

Q ss_pred             CeEEEEecCcccccc
Q 042646          495 KKLLVLDLNGLLVDI  509 (560)
Q Consensus       495 KKLLVLDLDETLVHS  509 (560)
                      .||+++||||||+..
T Consensus        27 ikli~~DlDGTLl~~   41 (301)
T 2b30_A           27 IKLLLIDFDGTLFVD   41 (301)
T ss_dssp             CCEEEEETBTTTBCC
T ss_pred             ccEEEEECCCCCcCC
Confidence            589999999999986

>3ewi_A N-acylneuraminate cytidylyltransferase; beta barrel, HAD-like, rossmannoid fold, nucleotidyltransferase, nucleus; 1.90A {Mus musculus}

Probab=89.27  E-value=0.54  Score=41.32  Aligned_cols=53  Identities=19%  Similarity=0.101  Sum_probs=33.1

Q ss_pred             CCeEEEEecCcccccccCCCCCCCCCCeeeccceeEeCccHHHHHHHHHhc-cEEEEEccc
Q 042646          494 KKKLLVLDLNGLLVDIVASPYHRYRPDKMVSNKAVFKRPCCDEFLSFCFER-FNVGVWSRG  553 (560)
Q Consensus       494 KKKLLVLDLDETLVHSSskpp~g~kPDfkV~~yyVyKRPhLDEFLdfVsE~-FEVVVWTSS  553 (560)
                      +-|+||+|+||||++....    +.++... -..+..|...  .|+++.+. +.++|-|+.
T Consensus         8 ~ikliv~D~DGtL~d~~~~----~~~~g~~-~~~f~~~D~~--~L~~Lk~~Gi~~~I~Tg~   61 (168)
T 3ewi_A            8 EIKLLVCNIDGCLTNGHIY----VSGDQKE-IISYDVKDAI--GISLLKKSGIEVRLISER   61 (168)
T ss_dssp             CCCEEEEECCCCCSCSCCB----CCSSCCC-EEEEEHHHHH--HHHHHHHTTCEEEEECSS
T ss_pred             cCcEEEEeCccceECCcEE----EcCCCCE-EEEEecCcHH--HHHHHHHCCCEEEEEeCc
Confidence            5789999999999985321    1222211 0122333333  57787765 899999887

>2w43_A Hypothetical 2-haloalkanoic acid dehalogenase; hydrolase, metabolic process; HET: MES; 1.66A {Sulfolobus tokodaii} PDB: 2w11_A

Probab=89.25  E-value=0.12  Score=43.17  Aligned_cols=29  Identities=21%  Similarity=-0.091  Sum_probs=23.2

Q ss_pred             eEeCccHHHHHHHHHhccEEEEEccccccc
Q 042646          528 VFKRPCCDEFLSFCFERFNVGVWSRGSRKI  557 (560)
Q Consensus       528 VyKRPhLDEFLdfVsE~FEVVVWTSS~~kY  557 (560)
                      +...|++.+ |+++.+.|.++|.|++...+
T Consensus        73 ~~~~~~~~~-l~~l~~~~~~~i~t~~~~~~  101 (201)
T 2w43_A           73 LKAYEDTKY-LKEISEIAEVYALSNGSINE  101 (201)
T ss_dssp             CEECGGGGG-HHHHHHHSEEEEEESSCHHH
T ss_pred             cccCCChHH-HHHHHhCCeEEEEeCcCHHH
Confidence            356799999 99997669999999886543

>3nas_A Beta-PGM, beta-phosphoglucomutase; PSI, structural genomics, protein structure initiative, NEW research center for structural genomics; 3.00A {Bacillus subtilis}

Probab=89.21  E-value=0.11  Score=43.62  Aligned_cols=25  Identities=16%  Similarity=0.170  Sum_probs=22.1

Q ss_pred             eCccHHHHHHHHHhc-cEEEEEcccc
Q 042646          530 KRPCCDEFLSFCFER-FNVGVWSRGS  554 (560)
Q Consensus       530 KRPhLDEFLdfVsE~-FEVVVWTSS~  554 (560)
                      ..|++.+||+++.+. |.++|.|.+.
T Consensus        93 ~~~~~~~~l~~l~~~g~~~~i~t~~~  118 (233)
T 3nas_A           93 LLPGIGRLLCQLKNENIKIGLASSSR  118 (233)
T ss_dssp             SCTTHHHHHHHHHHTTCEEEECCSCT
T ss_pred             cCcCHHHHHHHHHHCCCcEEEEcCch
Confidence            589999999999987 9999999863

>3fvv_A Uncharacterized protein; unknown function, structural genomics, PSI,MCSG, protein STR initiative, midwest center for structural genomics; 2.10A {Bordetella pertussis}

Probab=89.18  E-value=0.14  Score=43.46  Aligned_cols=30  Identities=0%  Similarity=-0.257  Sum_probs=25.4

Q ss_pred             EeCccHHHHHHHHHhc-cEEEEEcccccccc
Q 042646          529 FKRPCCDEFLSFCFER-FNVGVWSRGSRKIW  558 (560)
Q Consensus       529 yKRPhLDEFLdfVsE~-FEVVVWTSS~~kYV  558 (560)
                      ..+|++.+||+++.+. +.++|-|++...++
T Consensus        92 ~~~~g~~~~l~~l~~~g~~~~ivS~~~~~~~  122 (232)
T 3fvv_A           92 SLTVQAVDVVRGHLAAGDLCALVTATNSFVT  122 (232)
T ss_dssp             GCCHHHHHHHHHHHHTTCEEEEEESSCHHHH
T ss_pred             hcCHHHHHHHHHHHHCCCEEEEEeCCCHHHH
Confidence            4589999999999876 99999999876554

>3umc_A Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeruginosa}

Probab=89.17  E-value=0.14  Score=43.48  Aligned_cols=30  Identities=10%  Similarity=0.021  Sum_probs=24.5

Q ss_pred             eEeCccHHHHHHHHHhccEEEEEccccccc
Q 042646          528 VFKRPCCDEFLSFCFERFNVGVWSRGSRKI  557 (560)
Q Consensus       528 VyKRPhLDEFLdfVsE~FEVVVWTSS~~kY  557 (560)
                      +...|++.+||+++.+.+.++|.|.....+
T Consensus       119 ~~~~~~~~~~l~~l~~~~~~~i~s~~~~~~  148 (254)
T 3umc_A          119 LRPWPDTLAGMHALKADYWLAALSNGNTAL  148 (254)
T ss_dssp             CEECTTHHHHHHHHTTTSEEEECCSSCHHH
T ss_pred             CCCCccHHHHHHHHHhcCeEEEEeCCCHHH
Confidence            345799999999999889999998876543

>2pq0_A Hypothetical conserved protein GK1056; hyopthetical protein, structural genomics, unknown function; 2.60A {Geobacillus kaustophilus} PDB: 2qyh_A

Probab=89.13  E-value=0.13  Score=45.22  Aligned_cols=16  Identities=31%  Similarity=0.706  Sum_probs=14.1

Q ss_pred             CeEEEEecCccccccc
Q 042646          495 KKLLVLDLNGLLVDIV  510 (560)
Q Consensus       495 KKLLVLDLDETLVHSS  510 (560)
                      .|++++||||||+++.
T Consensus         3 ~kli~~DlDGTLl~~~   18 (258)
T 2pq0_A            3 RKIVFFDIDGTLLDEQ   18 (258)
T ss_dssp             CCEEEECTBTTTBCTT
T ss_pred             ceEEEEeCCCCCcCCC
Confidence            4799999999999864

>3smv_A S-(-)-azetidine-2-carboxylate hydrolase; haloacid dehalogenase superfamily, L-azetidine-2- carboxylate; HET: GOL; 1.38A {Pseudomonas}

Probab=89.06  E-value=0.12  Score=42.94  Aligned_cols=30  Identities=17%  Similarity=0.077  Sum_probs=25.1

Q ss_pred             eEeCccHHHHHHHHHhccEEEEEccccccc
Q 042646          528 VFKRPCCDEFLSFCFERFNVGVWSRGSRKI  557 (560)
Q Consensus       528 VyKRPhLDEFLdfVsE~FEVVVWTSS~~kY  557 (560)
                      +...|++.++|+++.+.|.++|.|.+....
T Consensus        98 ~~~~~~~~~~l~~l~~~~~~~i~tn~~~~~  127 (240)
T 3smv_A           98 WPAFPDTVEALQYLKKHYKLVILSNIDRNE  127 (240)
T ss_dssp             CCBCTTHHHHHHHHHHHSEEEEEESSCHHH
T ss_pred             CCCCCcHHHHHHHHHhCCeEEEEeCCChhH
Confidence            356899999999999889999999876543

>2x4d_A HLHPP, phospholysine phosphohistidine inorganic pyrophos phosphatase; hydrolase; 1.92A {Homo sapiens}

Probab=89.03  E-value=0.12  Score=44.14  Aligned_cols=15  Identities=33%  Similarity=0.596  Sum_probs=13.8

Q ss_pred             CeEEEEecCcccccc
Q 042646          495 KKLLVLDLNGLLVDI  509 (560)
Q Consensus       495 KKLLVLDLDETLVHS  509 (560)
                      -|++++||||||+++
T Consensus        12 ~k~i~fDlDGTLl~s   26 (271)
T 2x4d_A           12 VRGVLLDISGVLYDS   26 (271)
T ss_dssp             CCEEEECCBTTTEEC
T ss_pred             CCEEEEeCCCeEEec
Confidence            589999999999995

>1zrn_A L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseudomonas SP} SCOP: c.108.1.1 PDB: 1zrm_A 1jud_A 1qh9_A

Probab=88.91  E-value=0.12  Score=43.48  Aligned_cols=31  Identities=16%  Similarity=0.091  Sum_probs=25.6

Q ss_pred             eEeCccHHHHHHHHHhc-cEEEEEcccccccc
Q 042646          528 VFKRPCCDEFLSFCFER-FNVGVWSRGSRKIW  558 (560)
Q Consensus       528 VyKRPhLDEFLdfVsE~-FEVVVWTSS~~kYV  558 (560)
                      +..+|++.++|+++.+. |.++|.|++...++
T Consensus        94 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~  125 (232)
T 1zrn_A           94 LAPFSEVPDSLRELKRRGLKLAILSNGSPQSI  125 (232)
T ss_dssp             CEECTTHHHHHHHHHHTTCEEEEEESSCHHHH
T ss_pred             CCCCccHHHHHHHHHHCCCEEEEEeCCCHHHH
Confidence            45779999999999876 99999998866543

>3dv9_A Beta-phosphoglucomutase; structural genomics, APC60149, PSI- protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.72A {Bacteroides vulgatus}

Probab=88.87  E-value=0.15  Score=43.00  Aligned_cols=31  Identities=13%  Similarity=0.000  Sum_probs=24.3

Q ss_pred             eEeCccHHHHHHHHHhc-cEEEEEcccccccc
Q 042646          528 VFKRPCCDEFLSFCFER-FNVGVWSRGSRKIW  558 (560)
Q Consensus       528 VyKRPhLDEFLdfVsE~-FEVVVWTSS~~kYV  558 (560)
                      +...|++.++|+++.+. +.++|.|.+...++
T Consensus       107 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~  138 (247)
T 3dv9_A          107 AERMPGALEVLTKIKSEGLTPMVVTGSGQTSL  138 (247)
T ss_dssp             CCBCTTHHHHHHHHHHTTCEEEEECSCC---C
T ss_pred             CCCCCCHHHHHHHHHHcCCcEEEEcCCchHHH
Confidence            46679999999999887 99999998876543

>1swv_A Phosphonoacetaldehyde hydrolase; HAD enzyme superfamily, phosphonotase, metal binding; 2.30A {Bacillus cereus} SCOP: c.108.1.3 PDB: 1sww_A 2iof_A* 2ioh_A 1rql_A 1rqn_A 2iof_K* 1rdf_A 1fez_A

Probab=88.85  E-value=0.13  Score=44.44  Aligned_cols=29  Identities=17%  Similarity=0.131  Sum_probs=22.8

Q ss_pred             eEeCccHHHHHHHHHhc-cEEEEEcccccc
Q 042646          528 VFKRPCCDEFLSFCFER-FNVGVWSRGSRK  556 (560)
Q Consensus       528 VyKRPhLDEFLdfVsE~-FEVVVWTSS~~k  556 (560)
                      +...|++.+||+++.+. |.++|.|+....
T Consensus       102 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~  131 (267)
T 1swv_A          102 ASPINGVKEVIASLRERGIKIGSTTGYTRE  131 (267)
T ss_dssp             CCBCTTHHHHHHHHHHTTCEEEEBCSSCHH
T ss_pred             cccCccHHHHHHHHHHcCCeEEEEcCCCHH
Confidence            34578999999999876 889998876544

>3ed5_A YFNB; APC60080, bacillus subtilis subsp. subtilis STR. 168, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.72A {Bacillus subtilis} PDB: 3i76_A

Probab=88.81  E-value=0.13  Score=43.00  Aligned_cols=30  Identities=10%  Similarity=0.054  Sum_probs=24.9

Q ss_pred             eEeCccHHHHHHHHHhccEEEEEccccccc
Q 042646          528 VFKRPCCDEFLSFCFERFNVGVWSRGSRKI  557 (560)
Q Consensus       528 VyKRPhLDEFLdfVsE~FEVVVWTSS~~kY  557 (560)
                      +...|++.++|+++.+.|.++|.|.....+
T Consensus       102 ~~~~~~~~~~l~~l~~~~~~~i~t~~~~~~  131 (238)
T 3ed5_A          102 HQLIDGAFDLISNLQQQFDLYIVTNGVSHT  131 (238)
T ss_dssp             CCBCTTHHHHHHHHHTTSEEEEEECSCHHH
T ss_pred             CCCCccHHHHHHHHHhcCeEEEEeCCCHHH
Confidence            456899999999998879999999876543

>2hdo_A Phosphoglycolate phosphatase; NP_784602.1, structur genomics, PSI-2, protein structure initiative, joint center structural genomics; HET: MSE; 1.50A {Lactobacillus plantarum} SCOP: c.108.1.6

Probab=88.78  E-value=0.13  Score=42.87  Aligned_cols=31  Identities=10%  Similarity=0.118  Sum_probs=25.8

Q ss_pred             eeEeCccHHHHHHHHHhccEEEEEccccccc
Q 042646          527 AVFKRPCCDEFLSFCFERFNVGVWSRGSRKI  557 (560)
Q Consensus       527 yVyKRPhLDEFLdfVsE~FEVVVWTSS~~kY  557 (560)
                      .+..+|++.++|+++.+.|.++|.|++...+
T Consensus        81 ~~~~~~~~~~~l~~l~~~~~~~i~s~~~~~~  111 (209)
T 2hdo_A           81 QIELYPGITSLFEQLPSELRLGIVTSQRRNE  111 (209)
T ss_dssp             GCEECTTHHHHHHHSCTTSEEEEECSSCHHH
T ss_pred             cCCcCCCHHHHHHHHHhcCcEEEEeCCCHHH
Confidence            3567899999999998779999999886544

>4ap9_A Phosphoserine phosphatase; hydrolase, haloacid dehalogenase superfamily, NDSB; HET: 1PS; 1.78A {Thermococcus onnurineus} PDB: 4b6j_A

Probab=88.77  E-value=0.16  Score=41.22  Aligned_cols=31  Identities=23%  Similarity=0.226  Sum_probs=26.8

Q ss_pred             eEeCccHHHHHHHHHhc-cEEEEEcccccccc
Q 042646          528 VFKRPCCDEFLSFCFER-FNVGVWSRGSRKIW  558 (560)
Q Consensus       528 VyKRPhLDEFLdfVsE~-FEVVVWTSS~~kYV  558 (560)
                      +..+|++.++|+++.+. +.++|.|++...++
T Consensus        78 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~  109 (201)
T 4ap9_A           78 VNVSPEARELVETLREKGFKVVLISGSFEEVL  109 (201)
T ss_dssp             CCCCHHHHHHHHHHHHTTCEEEEEEEEETTTS
T ss_pred             CCCChhHHHHHHHHHHCCCeEEEEeCCcHHHH
Confidence            46789999999999987 99999998877654

>3iru_A Phoshonoacetaldehyde hydrolase like protein; phosphonoacetaldehyde hydrolase like P structural genomics, PSI-2, protein structure initiative; 2.30A {Oleispira antarctica} SCOP: c.108.1.0

Probab=88.77  E-value=0.15  Score=43.74  Aligned_cols=30  Identities=13%  Similarity=0.038  Sum_probs=24.9

Q ss_pred             eEeCccHHHHHHHHHhc-cEEEEEccccccc
Q 042646          528 VFKRPCCDEFLSFCFER-FNVGVWSRGSRKI  557 (560)
Q Consensus       528 VyKRPhLDEFLdfVsE~-FEVVVWTSS~~kY  557 (560)
                      +...|++.++|+++.+. |.++|.|.....+
T Consensus       110 ~~~~~~~~~~l~~l~~~g~~~~i~tn~~~~~  140 (277)
T 3iru_A          110 SQLIPGWKEVFDKLIAQGIKVGGNTGYGPGM  140 (277)
T ss_dssp             CCBCTTHHHHHHHHHHTTCEEEEECSSCHHH
T ss_pred             CccCcCHHHHHHHHHHcCCeEEEEeCCchHH
Confidence            46689999999999877 9999999876543

>2i6x_A Hydrolase, haloacid dehalogenase-like family; HAD superfamily, struct genomics, PSI-2, protein structure initiative; HET: MSE; 2.40A {Porphyromonas gingivalis}

Probab=88.64  E-value=0.13  Score=42.74  Aligned_cols=31  Identities=3%  Similarity=-0.115  Sum_probs=25.6

Q ss_pred             eeEeCccHHHHHHHHHhccEEEEEccccccc
Q 042646          527 AVFKRPCCDEFLSFCFERFNVGVWSRGSRKI  557 (560)
Q Consensus       527 yVyKRPhLDEFLdfVsE~FEVVVWTSS~~kY  557 (560)
                      .+...|++.++|+++.+.|.++|.|++...+
T Consensus        87 ~~~~~~~~~~~l~~l~~g~~~~i~t~~~~~~  117 (211)
T 2i6x_A           87 LEEISAEKFDYIDSLRPDYRLFLLSNTNPYV  117 (211)
T ss_dssp             EEEECHHHHHHHHHHTTTSEEEEEECCCHHH
T ss_pred             hcccChHHHHHHHHHHcCCeEEEEeCCCHHH
Confidence            3467899999999998889999999876543

>2hsz_A Novel predicted phosphatase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: UNL; 1.90A {Haemophilus somnus 129PT} SCOP: c.108.1.6

Probab=88.60  E-value=0.16  Score=44.25  Aligned_cols=30  Identities=17%  Similarity=0.063  Sum_probs=25.0

Q ss_pred             eEeCccHHHHHHHHHhc-cEEEEEccccccc
Q 042646          528 VFKRPCCDEFLSFCFER-FNVGVWSRGSRKI  557 (560)
Q Consensus       528 VyKRPhLDEFLdfVsE~-FEVVVWTSS~~kY  557 (560)
                      +..+|++.++|+++.+. |.++|.|++...+
T Consensus       113 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~  143 (243)
T 2hsz_A          113 SRLYPNVKETLEALKAQGYILAVVTNKPTKH  143 (243)
T ss_dssp             CEECTTHHHHHHHHHHTTCEEEEECSSCHHH
T ss_pred             CccCCCHHHHHHHHHHCCCEEEEEECCcHHH
Confidence            45679999999999876 9999999886653

>2ah5_A COG0546: predicted phosphatases; MCSG, structural genomics, hydrola haloacid dehalogenase-like, PSI; 1.74A {Streptococcus pneumoniae} SCOP: c.108.1.6

Probab=88.60  E-value=0.13  Score=43.67  Aligned_cols=30  Identities=7%  Similarity=-0.055  Sum_probs=24.7

Q ss_pred             eEeCccHHHHHHHHHhccEEEEEccccccc
Q 042646          528 VFKRPCCDEFLSFCFERFNVGVWSRGSRKI  557 (560)
Q Consensus       528 VyKRPhLDEFLdfVsE~FEVVVWTSS~~kY  557 (560)
                      +...|++.++|+++.+.|.++|.|++...+
T Consensus        83 ~~~~~g~~~~l~~L~~~~~l~i~T~~~~~~  112 (210)
T 2ah5_A           83 AQLFPQIIDLLEELSSSYPLYITTTKDTST  112 (210)
T ss_dssp             CEECTTHHHHHHHHHTTSCEEEEEEEEHHH
T ss_pred             CCCCCCHHHHHHHHHcCCeEEEEeCCCHHH
Confidence            456799999999998888899999876543

>2hi0_A Putative phosphoglycolate phosphatase; YP_619066.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.51A {Lactobacillus delbrueckii}

Probab=88.46  E-value=0.14  Score=44.39  Aligned_cols=30  Identities=10%  Similarity=0.027  Sum_probs=24.1

Q ss_pred             eEeCccHHHHHHHHHhc-cEEEEEccccccc
Q 042646          528 VFKRPCCDEFLSFCFER-FNVGVWSRGSRKI  557 (560)
Q Consensus       528 VyKRPhLDEFLdfVsE~-FEVVVWTSS~~kY  557 (560)
                      +...|++.+||+++.+. |.++|.|++...+
T Consensus       109 ~~~~~g~~~~l~~l~~~g~~~~i~t~~~~~~  139 (240)
T 2hi0_A          109 TGPFPGILDLMKNLRQKGVKLAVVSNKPNEA  139 (240)
T ss_dssp             CEECTTHHHHHHHHHHTTCEEEEEEEEEHHH
T ss_pred             CCcCCCHHHHHHHHHHCCCEEEEEeCCCHHH
Confidence            45679999999999866 9999999876543

>3u26_A PF00702 domain protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, unknown function; 1.59A {Pyrococcus horikoshii} SCOP: c.108.1.1 PDB: 1x42_A

Probab=88.41  E-value=0.14  Score=42.75  Aligned_cols=30  Identities=17%  Similarity=0.113  Sum_probs=24.9

Q ss_pred             eEeCccHHHHHHHHHhccEEEEEccccccc
Q 042646          528 VFKRPCCDEFLSFCFERFNVGVWSRGSRKI  557 (560)
Q Consensus       528 VyKRPhLDEFLdfVsE~FEVVVWTSS~~kY  557 (560)
                      +...|++.++|+++.+.|.++|.|.....+
T Consensus        99 ~~~~~~~~~~l~~l~~~~~~~i~t~~~~~~  128 (234)
T 3u26_A           99 GELYPEVVEVLKSLKGKYHVGMITDSDTEQ  128 (234)
T ss_dssp             CCBCTTHHHHHHHHTTTSEEEEEESSCHHH
T ss_pred             CCcCcCHHHHHHHHHhCCcEEEEECCCHHH
Confidence            456799999999998779999999876644

>1wr8_A Phosphoglycolate phosphatase; alpha / beta core domain, HAD superfamily, structural genomi structural genomics/proteomics initiative, RSGI; 1.60A {Pyrococcus horikoshii} SCOP: c.108.1.10

Probab=88.37  E-value=0.16  Score=44.63  Aligned_cols=16  Identities=19%  Similarity=0.308  Sum_probs=14.0

Q ss_pred             CeEEEEecCccccccc
Q 042646          495 KKLLVLDLNGLLVDIV  510 (560)
Q Consensus       495 KKLLVLDLDETLVHSS  510 (560)
                      .|++++||||||+++.
T Consensus         3 ~kli~~DlDGTLl~~~   18 (231)
T 1wr8_A            3 IKAISIDIDGTITYPN   18 (231)
T ss_dssp             CCEEEEESTTTTBCTT
T ss_pred             eeEEEEECCCCCCCCC
Confidence            3799999999999864

>3um9_A Haloacid dehalogenase, type II; haloacid dehalogenase-like hydrolase protein superfamily, defluorinase, hydrolase; 2.19A {Polaromonas SP}

Probab=88.32  E-value=0.17  Score=42.07  Aligned_cols=30  Identities=17%  Similarity=0.095  Sum_probs=25.2

Q ss_pred             eEeCccHHHHHHHHHhc-cEEEEEccccccc
Q 042646          528 VFKRPCCDEFLSFCFER-FNVGVWSRGSRKI  557 (560)
Q Consensus       528 VyKRPhLDEFLdfVsE~-FEVVVWTSS~~kY  557 (560)
                      +...|++.++|+++.+. |.++|.|.....+
T Consensus        95 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~  125 (230)
T 3um9_A           95 LTPFADVPQALQQLRAAGLKTAILSNGSRHS  125 (230)
T ss_dssp             CCBCTTHHHHHHHHHHTTCEEEEEESSCHHH
T ss_pred             CCCCCCHHHHHHHHHhCCCeEEEEeCCCHHH
Confidence            45689999999999887 9999999876543

>3cnh_A Hydrolase family protein; NP_295428.1, predicted hydrolase of haloacid dehalogenase-LI superfamily; HET: MSE PG4; 1.66A {Deinococcus radiodurans R1}

Probab=88.28  E-value=0.15  Score=42.08  Aligned_cols=29  Identities=14%  Similarity=0.094  Sum_probs=23.2

Q ss_pred             EeCccHHHHHHHHHhccEEEEEccccccc
Q 042646          529 FKRPCCDEFLSFCFERFNVGVWSRGSRKI  557 (560)
Q Consensus       529 yKRPhLDEFLdfVsE~FEVVVWTSS~~kY  557 (560)
                      ...|++.++|+++.+...++|.|++...+
T Consensus        86 ~~~~~~~~~l~~l~~~g~~~i~s~~~~~~  114 (200)
T 3cnh_A           86 QPRPEVLALARDLGQRYRMYSLNNEGRDL  114 (200)
T ss_dssp             CBCHHHHHHHHHHTTTSEEEEEECCCHHH
T ss_pred             ccCccHHHHHHHHHHcCCEEEEeCCcHHH
Confidence            36799999999998766888998876544

>3umg_A Haloacid dehalogenase; defluorinase, hydrolase; 2.25A {Rhodococcus jostii}

Probab=88.24  E-value=0.22  Score=41.84  Aligned_cols=30  Identities=17%  Similarity=0.165  Sum_probs=24.3

Q ss_pred             eEeCccHHHHHHHHHhccEEEEEccccccc
Q 042646          528 VFKRPCCDEFLSFCFERFNVGVWSRGSRKI  557 (560)
Q Consensus       528 VyKRPhLDEFLdfVsE~FEVVVWTSS~~kY  557 (560)
                      +...|++.++|+++.+.|.++|.|......
T Consensus       115 ~~~~~~~~~~l~~l~~~~~~~i~t~~~~~~  144 (254)
T 3umg_A          115 LTPWPDSVPGLTAIKAEYIIGPLSNGNTSL  144 (254)
T ss_dssp             CCBCTTHHHHHHHHHHHSEEEECSSSCHHH
T ss_pred             CcCCcCHHHHHHHHHhCCeEEEEeCCCHHH
Confidence            345799999999998889999998876543

>3vay_A HAD-superfamily hydrolase; rossmann fold, haloacid dehalogenase; 1.98A {Pseudomonas syringae PV}

Probab=88.21  E-value=0.16  Score=42.51  Aligned_cols=28  Identities=25%  Similarity=0.322  Sum_probs=23.8

Q ss_pred             eEeCccHHHHHHHHHhccEEEEEccccc
Q 042646          528 VFKRPCCDEFLSFCFERFNVGVWSRGSR  555 (560)
Q Consensus       528 VyKRPhLDEFLdfVsE~FEVVVWTSS~~  555 (560)
                      +...|++.++|+++.+.|.++|.|....
T Consensus       104 ~~~~~~~~~~l~~l~~~~~~~i~t~~~~  131 (230)
T 3vay_A          104 VQIFPEVQPTLEILAKTFTLGVITNGNA  131 (230)
T ss_dssp             CCBCTTHHHHHHHHHTTSEEEEEESSCC
T ss_pred             CccCcCHHHHHHHHHhCCeEEEEECCch
Confidence            4478999999999998899999998654

>3s6j_A Hydrolase, haloacid dehalogenase-like family; structural genomics, PSI-2; 2.20A {Pseudomonas syringae PV}

Probab=88.19  E-value=0.15  Score=42.40  Aligned_cols=30  Identities=13%  Similarity=0.129  Sum_probs=25.8

Q ss_pred             eEeCccHHHHHHHHHhc-cEEEEEccccccc
Q 042646          528 VFKRPCCDEFLSFCFER-FNVGVWSRGSRKI  557 (560)
Q Consensus       528 VyKRPhLDEFLdfVsE~-FEVVVWTSS~~kY  557 (560)
                      +..+|++.+||+++.+. |.++|.|.+...+
T Consensus        90 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~  120 (233)
T 3s6j_A           90 IIALPGAVELLETLDKENLKWCIATSGGIDT  120 (233)
T ss_dssp             CEECTTHHHHHHHHHHTTCCEEEECSSCHHH
T ss_pred             CccCCCHHHHHHHHHHCCCeEEEEeCCchhh
Confidence            67889999999999887 9999999876544

>2no4_A (S)-2-haloacid dehalogenase IVA; HAD superfamily, rossman fold, hydrol; 1.93A {Burkholderia cepacia} PDB: 2no5_A*

Probab=87.85  E-value=0.18  Score=42.96  Aligned_cols=29  Identities=21%  Similarity=0.217  Sum_probs=24.3

Q ss_pred             EeCccHHHHHHHHHhc-cEEEEEccccccc
Q 042646          529 FKRPCCDEFLSFCFER-FNVGVWSRGSRKI  557 (560)
Q Consensus       529 yKRPhLDEFLdfVsE~-FEVVVWTSS~~kY  557 (560)
                      ..+|++.++|+++.+. |.++|.|++...+
T Consensus       105 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~  134 (240)
T 2no4_A          105 SAYPDAAETLEKLKSAGYIVAILSNGNDEM  134 (240)
T ss_dssp             CBCTTHHHHHHHHHHTTCEEEEEESSCHHH
T ss_pred             CCCCCHHHHHHHHHHCCCEEEEEcCCCHHH
Confidence            4569999999999876 9999999886654

>2hoq_A Putative HAD-hydrolase PH1655; haloacid dehalogenase, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.70A {Pyrococcus horikoshii}

Probab=87.81  E-value=0.16  Score=43.57  Aligned_cols=30  Identities=17%  Similarity=0.226  Sum_probs=24.8

Q ss_pred             eEeCccHHHHHHHHHhc-cEEEEEccccccc
Q 042646          528 VFKRPCCDEFLSFCFER-FNVGVWSRGSRKI  557 (560)
Q Consensus       528 VyKRPhLDEFLdfVsE~-FEVVVWTSS~~kY  557 (560)
                      +...|++.++|+++.+. |.++|.|++...+
T Consensus        93 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~  123 (241)
T 2hoq_A           93 LREVPGARKVLIRLKELGYELGIITDGNPVK  123 (241)
T ss_dssp             CCBCTTHHHHHHHHHHHTCEEEEEECSCHHH
T ss_pred             CCCCccHHHHHHHHHHCCCEEEEEECCCchh
Confidence            34679999999999876 9999999876654

>3m1y_A Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, phophoserine phosphatase, protein structure initiative, structural genomics; 2.40A {Helicobacter pylori} SCOP: c.108.1.0

Probab=87.45  E-value=0.25  Score=41.08  Aligned_cols=30  Identities=20%  Similarity=0.079  Sum_probs=25.8

Q ss_pred             eEeCccHHHHHHHHHhc-cEEEEEccccccc
Q 042646          528 VFKRPCCDEFLSFCFER-FNVGVWSRGSRKI  557 (560)
Q Consensus       528 VyKRPhLDEFLdfVsE~-FEVVVWTSS~~kY  557 (560)
                      +..+|++.++|+++.+. |.++|.|++...+
T Consensus        74 ~~~~~~~~~~l~~l~~~g~~~~i~S~~~~~~  104 (217)
T 3m1y_A           74 LPLFEGALELVSALKEKNYKVVCFSGGFDLA  104 (217)
T ss_dssp             CCBCBTHHHHHHHHHTTTEEEEEEEEEEHHH
T ss_pred             CcCCCCHHHHHHHHHHCCCEEEEEcCCchhH
Confidence            55899999999999987 9999999876544

>3qnm_A Haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 1.70A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0

Probab=87.38  E-value=0.19  Score=41.81  Aligned_cols=30  Identities=23%  Similarity=0.352  Sum_probs=25.1

Q ss_pred             eEeCccHHHHHHHHHhccEEEEEccccccc
Q 042646          528 VFKRPCCDEFLSFCFERFNVGVWSRGSRKI  557 (560)
Q Consensus       528 VyKRPhLDEFLdfVsE~FEVVVWTSS~~kY  557 (560)
                      +...|++.++|+++.+.|.++|.|.+...+
T Consensus       106 ~~~~~~~~~~l~~l~~g~~~~i~sn~~~~~  135 (240)
T 3qnm_A          106 SGLMPHAKEVLEYLAPQYNLYILSNGFREL  135 (240)
T ss_dssp             CCBSTTHHHHHHHHTTTSEEEEEECSCHHH
T ss_pred             CCcCccHHHHHHHHHcCCeEEEEeCCchHH
Confidence            567899999999999779999999876543

>3qxg_A Inorganic pyrophosphatase; hydrolase, magnesium binding site, NEW YORK research center for structural genomics; HET: TLA; 1.24A {Bacteroides thetaiotaomicron} PDB: 3qu2_A* 3qx7_A 3quq_A* 3r9k_A 3qut_A 3qu9_A* 3qu7_A 3qu5_A 3qyp_A 3quc_A 3qub_A 3qu4_A

Probab=87.34  E-value=0.19  Score=43.00  Aligned_cols=30  Identities=13%  Similarity=-0.011  Sum_probs=25.4

Q ss_pred             eEeCccHHHHHHHHHhc-cEEEEEccccccc
Q 042646          528 VFKRPCCDEFLSFCFER-FNVGVWSRGSRKI  557 (560)
Q Consensus       528 VyKRPhLDEFLdfVsE~-FEVVVWTSS~~kY  557 (560)
                      +...|++.+||+++.+. |.++|.|.+...+
T Consensus       108 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~  138 (243)
T 3qxg_A          108 AERMPGAWELLQKVKSEGLTPMVVTGSGQLS  138 (243)
T ss_dssp             CCBCTTHHHHHHHHHHTTCEEEEECCCCCHH
T ss_pred             CCCCCCHHHHHHHHHHcCCcEEEEeCCcHHH
Confidence            45789999999999887 9999999877554

>3umb_A Dehalogenase-like hydrolase; 2.20A {Ralstonia solanacearum}

Probab=87.24  E-value=0.18  Score=42.17  Aligned_cols=30  Identities=20%  Similarity=0.205  Sum_probs=25.6

Q ss_pred             eEeCccHHHHHHHHHhc-cEEEEEccccccc
Q 042646          528 VFKRPCCDEFLSFCFER-FNVGVWSRGSRKI  557 (560)
Q Consensus       528 VyKRPhLDEFLdfVsE~-FEVVVWTSS~~kY  557 (560)
                      +...|++.++|+++.+. |.++|.|.+...+
T Consensus        98 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~  128 (233)
T 3umb_A           98 LSAFPENVPVLRQLREMGLPLGILSNGNPQM  128 (233)
T ss_dssp             CEECTTHHHHHHHHHTTTCCEEEEESSCHHH
T ss_pred             CCCCCCHHHHHHHHHhCCCcEEEEeCCCHHH
Confidence            56789999999999987 9999999886544

>3l5k_A Protein GS1, haloacid dehalogenase-like hydrolase domain- containing protein 1A; HDHD1A, haloacid dehalogenase-like hydrolase domain containing 1A; 2.00A {Homo sapiens}

Probab=87.22  E-value=0.22  Score=42.71  Aligned_cols=30  Identities=3%  Similarity=0.051  Sum_probs=25.4

Q ss_pred             eeEeCccHHHHHHHHHhc-cEEEEEcccccc
Q 042646          527 AVFKRPCCDEFLSFCFER-FNVGVWSRGSRK  556 (560)
Q Consensus       527 yVyKRPhLDEFLdfVsE~-FEVVVWTSS~~k  556 (560)
                      .+...|++.++|+++.+. |.++|.|.+...
T Consensus       110 ~~~~~~~~~~~l~~l~~~g~~~~i~sn~~~~  140 (250)
T 3l5k_A          110 TAALMPGAEKLIIHLRKHGIPFALATSSRSA  140 (250)
T ss_dssp             GCCBCTTHHHHHHHHHHTTCCEEEECSCCHH
T ss_pred             cCCCCCCHHHHHHHHHhCCCcEEEEeCCCHH
Confidence            356889999999999987 999999988654

>3pdw_A Uncharacterized hydrolase YUTF; structural genomics, PSI2, NYSGXRC, protein structure initia YORK SGX research center for structural genomics; 1.60A {Bacillus subtilis} SCOP: c.108.1.0

Probab=87.21  E-value=0.19  Score=44.28  Aligned_cols=15  Identities=27%  Similarity=0.377  Sum_probs=13.6

Q ss_pred             CeEEEEecCcccccc
Q 042646          495 KKLLVLDLNGLLVDI  509 (560)
Q Consensus       495 KKLLVLDLDETLVHS  509 (560)
                      -|+++|||||||++.
T Consensus         6 ~kli~~DlDGTLl~~   20 (266)
T 3pdw_A            6 YKGYLIDLDGTMYNG   20 (266)
T ss_dssp             CSEEEEECSSSTTCH
T ss_pred             CCEEEEeCcCceEeC
Confidence            689999999999984

>1rlm_A Phosphatase; HAD family, rossman fold, hydrolase; 1.90A {Escherichia coli} SCOP: c.108.1.10 PDB: 1rlt_A 1rlo_A* 2hf2_A

Probab=87.06  E-value=0.21  Score=44.85  Aligned_cols=16  Identities=25%  Similarity=0.532  Sum_probs=14.0

Q ss_pred             CeEEEEecCccccccc
Q 042646          495 KKLLVLDLNGLLVDIV  510 (560)
Q Consensus       495 KKLLVLDLDETLVHSS  510 (560)
                      .|++++||||||++..
T Consensus         3 ~kli~~DlDGTLl~~~   18 (271)
T 1rlm_A            3 VKVIVTDMDGTFLNDA   18 (271)
T ss_dssp             CCEEEECCCCCCSCTT
T ss_pred             ccEEEEeCCCCCCCCC
Confidence            4799999999999853

>2rbk_A Putative uncharacterized protein; HAD-like phosphatase, unknown function; 1.00A {Bacteroides thetaiotaomicron} SCOP: c.108.1.10 PDB: 1ymq_A 2rb5_A 2rav_A 2rar_A

Probab=87.04  E-value=0.2  Score=44.51  Aligned_cols=15  Identities=40%  Similarity=0.669  Sum_probs=13.5

Q ss_pred             eEEEEecCccccccc
Q 042646          496 KLLVLDLNGLLVDIV  510 (560)
Q Consensus       496 KLLVLDLDETLVHSS  510 (560)
                      |++++||||||++..
T Consensus         3 kli~~DlDGTLl~~~   17 (261)
T 2rbk_A            3 KALFFDIDGTLVSFE   17 (261)
T ss_dssp             CEEEECSBTTTBCTT
T ss_pred             cEEEEeCCCCCcCCC
Confidence            799999999999864

>3kc2_A Uncharacterized protein YKR070W; HAD-like, mitochondral protein, PSI, MCSG, structural genomi protein structure initiative; HET: MSE; 1.55A {Saccharomyces cerevisiae} PDB: 3rf6_A*

Probab=86.94  E-value=0.65  Score=45.63  Aligned_cols=45  Identities=18%  Similarity=0.196  Sum_probs=31.5

Q ss_pred             CCCCCeEEEEecCcccccccCCCCCCCCCCeeeccceeEeCccHHHHHHHHHhc-cEEEEEccc
Q 042646          491 GHSKKKLLVLDLNGLLVDIVASPYHRYRPDKMVSNKAVFKRPCCDEFLSFCFER-FNVGVWSRG  553 (560)
Q Consensus       491 ~~~KKKLLVLDLDETLVHSSskpp~g~kPDfkV~~yyVyKRPhLDEFLdfVsE~-FEVVVWTSS  553 (560)
                      .-.+++.++|||||||++...                  .=|+..+||+++.+. +.+++.|..
T Consensus         9 ~~~~~~~~l~D~DGvl~~g~~------------------~~p~a~~~l~~l~~~g~~~~~vTNn   54 (352)
T 3kc2_A            9 TTSKKIAFAFDIDGVLFRGKK------------------PIAGASDALKLLNRNKIPYILLTNG   54 (352)
T ss_dssp             ---CCEEEEECCBTTTEETTE------------------ECTTHHHHHHHHHHTTCCEEEECSC
T ss_pred             hhccCCEEEEECCCeeEcCCe------------------eCcCHHHHHHHHHHCCCEEEEEeCC
Confidence            334789999999999998521                  127778888887754 777777754

>3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism, detoxification, magnesium, metal-binding, peroxisome; HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P* 1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A* 4hai_A* 1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A*

Probab=86.88  E-value=0.21  Score=46.30  Aligned_cols=26  Identities=4%  Similarity=-0.100  Sum_probs=23.4

Q ss_pred             eEeCccHHHHHHHHHhc-cEEEEEccc
Q 042646          528 VFKRPCCDEFLSFCFER-FNVGVWSRG  553 (560)
Q Consensus       528 VyKRPhLDEFLdfVsE~-FEVVVWTSS  553 (560)
                      +...|++.++|+++.++ |.++|.|++
T Consensus        99 ~~~~~~~~~~L~~L~~~g~~~~i~Tn~  125 (555)
T 3i28_A           99 RKINRPMLQAALMLRKKGFTTAILTNT  125 (555)
T ss_dssp             CEECHHHHHHHHHHHHTTCEEEEEECC
T ss_pred             cCcChhHHHHHHHHHHCCCEEEEEeCC
Confidence            46779999999999987 999999997

>2ho4_A Haloacid dehalogenase-like hydrolase domain containing 2; HDHD2, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; 2.20A {Mus musculus} PDB: 3hlt_A

Probab=86.75  E-value=0.22  Score=42.78  Aligned_cols=17  Identities=35%  Similarity=0.302  Sum_probs=13.5

Q ss_pred             CCeEEEEecCccccccc
Q 042646          494 KKKLLVLDLNGLLVDIV  510 (560)
Q Consensus       494 KKKLLVLDLDETLVHSS  510 (560)
                      .-|++++||||||+++.
T Consensus         6 ~ik~i~fDlDGTLld~~   22 (259)
T 2ho4_A            6 ALKAVLVDLNGTLHIED   22 (259)
T ss_dssp             CCCEEEEESSSSSCC--
T ss_pred             hCCEEEEeCcCcEEeCC
Confidence            35899999999999864

>3kbb_A Phosphorylated carbohydrates phosphatase TM_1254; hydrolase, arbohydrate metabolism, COBA magnesium, manganese, metal-binding, nickel; HET: MSE GOL; 1.74A {Thermotoga maritima MSB8}

Probab=86.61  E-value=0.24  Score=41.55  Aligned_cols=31  Identities=13%  Similarity=0.198  Sum_probs=25.4

Q ss_pred             eEeCccHHHHHHHHHhc-cEEEEEcccccccc
Q 042646          528 VFKRPCCDEFLSFCFER-FNVGVWSRGSRKIW  558 (560)
Q Consensus       528 VyKRPhLDEFLdfVsE~-FEVVVWTSS~~kYV  558 (560)
                      +...|++.++|+++.+. |.++|-|++...++
T Consensus        83 ~~~~pg~~~~l~~L~~~g~~~~i~tn~~~~~~  114 (216)
T 3kbb_A           83 LKENPGVREALEFVKSKRIKLALATSTPQREA  114 (216)
T ss_dssp             CCBCTTHHHHHHHHHHTTCEEEEECSSCHHHH
T ss_pred             cccCccHHHHHHHHHHcCCCcccccCCcHHHH
Confidence            45789999999999765 99999999876543

>1nf2_A Phosphatase; structural proteomics, HAD NEW fold, structural genomics, BSGC structure funded by NIH structure initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.108.1.10

Probab=86.59  E-value=0.23  Score=44.66  Aligned_cols=15  Identities=33%  Similarity=0.669  Sum_probs=13.4

Q ss_pred             eEEEEecCccccccc
Q 042646          496 KLLVLDLNGLLVDIV  510 (560)
Q Consensus       496 KLLVLDLDETLVHSS  510 (560)
                      |++++||||||++..
T Consensus         3 kli~~DlDGTLl~~~   17 (268)
T 1nf2_A            3 RVFVFDLDGTLLNDN   17 (268)
T ss_dssp             CEEEEECCCCCSCTT
T ss_pred             cEEEEeCCCcCCCCC
Confidence            799999999999853

>4eek_A Beta-phosphoglucomutase-related protein; hydrolase, magnesium binding site, enzyme function initiativ; 1.60A {Deinococcus radiodurans} PDB: 4eel_A* 4een_A

Probab=86.58  E-value=0.22  Score=42.93  Aligned_cols=31  Identities=16%  Similarity=-0.025  Sum_probs=25.9

Q ss_pred             eeEeCccHHHHHHHHHhc-cEEEEEccccccc
Q 042646          527 AVFKRPCCDEFLSFCFER-FNVGVWSRGSRKI  557 (560)
Q Consensus       527 yVyKRPhLDEFLdfVsE~-FEVVVWTSS~~kY  557 (560)
                      .+...|++.+||+++.+. |.++|.|.+...+
T Consensus       108 ~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~  139 (259)
T 4eek_A          108 GVTAIEGAAETLRALRAAGVPFAIGSNSERGR  139 (259)
T ss_dssp             TCEECTTHHHHHHHHHHHTCCEEEECSSCHHH
T ss_pred             cCCcCccHHHHHHHHHHCCCeEEEEeCCCHHH
Confidence            367899999999999875 9999999886644

>3sd7_A Putative phosphatase; structural genomics, haloacid dehalogenase-like hydrolase, H center for structural genomics of infectious diseases; HET: PGE; 1.70A {Clostridium difficile}

Probab=86.57  E-value=0.21  Score=42.51  Aligned_cols=30  Identities=10%  Similarity=-0.062  Sum_probs=25.6

Q ss_pred             eEeCccHHHHHHHHHhc-cEEEEEccccccc
Q 042646          528 VFKRPCCDEFLSFCFER-FNVGVWSRGSRKI  557 (560)
Q Consensus       528 VyKRPhLDEFLdfVsE~-FEVVVWTSS~~kY  557 (560)
                      +..+|++.+||+++.+. +.++|.|.+...+
T Consensus       109 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~  139 (240)
T 3sd7_A          109 NKIYENMKEILEMLYKNGKILLVATSKPTVF  139 (240)
T ss_dssp             CEECTTHHHHHHHHHHTTCEEEEEEEEEHHH
T ss_pred             cccCccHHHHHHHHHHCCCeEEEEeCCcHHH
Confidence            56899999999999987 9999999876544

>3qgm_A P-nitrophenyl phosphatase (PHO2); structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 2.00A {Archaeoglobus fulgidus} SCOP: c.108.1.0

Probab=86.40  E-value=0.23  Score=43.73  Aligned_cols=16  Identities=31%  Similarity=0.576  Sum_probs=14.0

Q ss_pred             CeEEEEecCccccccc
Q 042646          495 KKLLVLDLNGLLVDIV  510 (560)
Q Consensus       495 KKLLVLDLDETLVHSS  510 (560)
                      -|+++|||||||++..
T Consensus         8 ~kli~~DlDGTLl~~~   23 (268)
T 3qgm_A            8 KKGYIIDIDGVIGKSV   23 (268)
T ss_dssp             CSEEEEECBTTTEETT
T ss_pred             CCEEEEcCcCcEECCC
Confidence            6899999999999753

>1nrw_A Hypothetical protein, haloacid dehalogenase-like hydrolase; structural genomics, PSI, protein structure initiative; 1.70A {Bacillus subtilis} SCOP: c.108.1.10

Probab=86.35  E-value=0.24  Score=44.87  Aligned_cols=16  Identities=38%  Similarity=0.671  Sum_probs=13.9

Q ss_pred             CeEEEEecCccccccc
Q 042646          495 KKLLVLDLNGLLVDIV  510 (560)
Q Consensus       495 KKLLVLDLDETLVHSS  510 (560)
                      -|++++||||||+++.
T Consensus         4 ikli~~DlDGTLl~~~   19 (288)
T 1nrw_A            4 MKLIAIDLDGTLLNSK   19 (288)
T ss_dssp             CCEEEEECCCCCSCTT
T ss_pred             eEEEEEeCCCCCCCCC
Confidence            4799999999999864

>3epr_A Hydrolase, haloacid dehalogenase-like family; structural genomics, unknown function, HAD superfamily hydro PSI-2; 1.55A {Streptococcus agalactiae serogroup V} SCOP: c.108.1.14 PDB: 1ys9_A 1wvi_A 1ydf_A

Probab=86.18  E-value=0.22  Score=44.26  Aligned_cols=16  Identities=25%  Similarity=0.283  Sum_probs=14.1

Q ss_pred             CeEEEEecCccccccc
Q 042646          495 KKLLVLDLNGLLVDIV  510 (560)
Q Consensus       495 KKLLVLDLDETLVHSS  510 (560)
                      -|+++|||||||++..
T Consensus         5 ~kli~~DlDGTLl~~~   20 (264)
T 3epr_A            5 YKGYLIDLDGTIYKGK   20 (264)
T ss_dssp             CCEEEECCBTTTEETT
T ss_pred             CCEEEEeCCCceEeCC
Confidence            5899999999999853

>1qq5_A Protein (L-2-haloacid dehalogenase); hydrolase; 1.52A {Xanthobacter autotrophicus} SCOP: c.108.1.1 PDB: 1qq6_A* 1qq7_A* 1aq6_A

Probab=86.14  E-value=0.23  Score=43.10  Aligned_cols=30  Identities=13%  Similarity=0.163  Sum_probs=24.9

Q ss_pred             eEeCccHHHHHHHHHhccEEEEEcccccccc
Q 042646          528 VFKRPCCDEFLSFCFERFNVGVWSRGSRKIW  558 (560)
Q Consensus       528 VyKRPhLDEFLdfVsE~FEVVVWTSS~~kYV  558 (560)
                      +...|++.++|+++. .|.++|-|++...++
T Consensus        92 ~~~~~~~~~~l~~l~-g~~~~i~t~~~~~~~  121 (253)
T 1qq5_A           92 LTPYPDAAQCLAELA-PLKRAILSNGAPDML  121 (253)
T ss_dssp             CCBCTTHHHHHHHHT-TSEEEEEESSCHHHH
T ss_pred             CCCCccHHHHHHHHc-CCCEEEEeCcCHHHH
Confidence            356799999999999 999999998876543

>4gib_A Beta-phosphoglucomutase; rossmann fold, HAD-like, structural genomics, center for structural genomics of infectious DISE csgid, isomerase; 2.27A {Clostridium difficile}

Probab=86.11  E-value=0.23  Score=43.72  Aligned_cols=20  Identities=15%  Similarity=0.223  Sum_probs=15.7

Q ss_pred             eCccHHHHHHHHHhc-cEEEE
Q 042646          530 KRPCCDEFLSFCFER-FNVGV  549 (560)
Q Consensus       530 KRPhLDEFLdfVsE~-FEVVV  549 (560)
                      ..|++.++|+++.+. +-++|
T Consensus       117 ~~p~~~~ll~~Lk~~g~~i~i  137 (250)
T 4gib_A          117 ILPGIESLLIDVKSNNIKIGL  137 (250)
T ss_dssp             SCTTHHHHHHHHHHTTCEEEE
T ss_pred             cchhHHHHHHHHHhccccccc
Confidence            578999999999876 55555

>2nyv_A Pgpase, PGP, phosphoglycolate phosphatase; structural genomics, PSI-2, protein structure initiative; 2.10A {Aquifex aeolicus} PDB: 2yy6_A

Probab=85.74  E-value=0.24  Score=42.45  Aligned_cols=31  Identities=16%  Similarity=0.052  Sum_probs=26.0

Q ss_pred             eeEeCccHHHHHHHHHhc-cEEEEEccccccc
Q 042646          527 AVFKRPCCDEFLSFCFER-FNVGVWSRGSRKI  557 (560)
Q Consensus       527 yVyKRPhLDEFLdfVsE~-FEVVVWTSS~~kY  557 (560)
                      .+...|++.++|+++.+. |.++|.|++...+
T Consensus        81 ~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~  112 (222)
T 2nyv_A           81 YTKPYPEIPYTLEALKSKGFKLAVVSNKLEEL  112 (222)
T ss_dssp             SCEECTTHHHHHHHHHHTTCEEEEECSSCHHH
T ss_pred             cCccCCCHHHHHHHHHHCCCeEEEEcCCCHHH
Confidence            456789999999999876 9999999876654

>2qlt_A (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, saccharom cerevisiae, structural genomics, PSI-2, protein structure initiative; 1.60A {Saccharomyces cerevisiae}

Probab=85.70  E-value=0.24  Score=44.17  Aligned_cols=30  Identities=13%  Similarity=0.087  Sum_probs=24.9

Q ss_pred             eEeCccHHHHHHHHHhc--cEEEEEccccccc
Q 042646          528 VFKRPCCDEFLSFCFER--FNVGVWSRGSRKI  557 (560)
Q Consensus       528 VyKRPhLDEFLdfVsE~--FEVVVWTSS~~kY  557 (560)
                      +...|++.+||+++.+.  +.++|.|++...+
T Consensus       113 ~~~~~g~~~~L~~l~~~~g~~l~i~T~~~~~~  144 (275)
T 2qlt_A          113 SIEVPGAVKLCNALNALPKEKWAVATSGTRDM  144 (275)
T ss_dssp             CEECTTHHHHHHHHHTSCGGGEEEECSSCHHH
T ss_pred             CCcCcCHHHHHHHHHhccCCeEEEEeCCCHHH
Confidence            56789999999999875  8999999876654

>2zg6_A Putative uncharacterized protein ST2620, probable 2-haloalkanoic; probable 2-haloalkanoic acid dehalogenase, hydrolase, structural genomics; 2.40A {Sulfolobus tokodaii}

Probab=85.03  E-value=0.3  Score=41.68  Aligned_cols=29  Identities=21%  Similarity=0.138  Sum_probs=24.4

Q ss_pred             eeEeCccHHHHHHHHHhc-cEEEEEccccc
Q 042646          527 AVFKRPCCDEFLSFCFER-FNVGVWSRGSR  555 (560)
Q Consensus       527 yVyKRPhLDEFLdfVsE~-FEVVVWTSS~~  555 (560)
                      .+...|++.+||+++.+. |.++|.|++..
T Consensus        93 ~~~~~~~~~~~l~~l~~~g~~~~i~Tn~~~  122 (220)
T 2zg6_A           93 EAFLYDDTLEFLEGLKSNGYKLALVSNASP  122 (220)
T ss_dssp             EEEECTTHHHHHHHHHTTTCEEEECCSCHH
T ss_pred             CceECcCHHHHHHHHHHCCCEEEEEeCCcH
Confidence            356789999999999986 99999998754

>1xvi_A MPGP, YEDP, putative mannosyl-3-phosphoglycerate phosphatase; hypothetical protein, conserved protein, phophatase-like domain; HET: 1PE PG4 PGE; 2.26A {Escherichia coli K12} SCOP: c.108.1.10

Probab=84.98  E-value=0.34  Score=44.06  Aligned_cols=17  Identities=35%  Similarity=0.501  Sum_probs=14.6

Q ss_pred             CCeEEEEecCccccccc
Q 042646          494 KKKLLVLDLNGLLVDIV  510 (560)
Q Consensus       494 KKKLLVLDLDETLVHSS  510 (560)
                      +.+|+++||||||++..
T Consensus         8 ~~~li~~DlDGTLl~~~   24 (275)
T 1xvi_A            8 QPLLVFSDLDGTLLDSH   24 (275)
T ss_dssp             CCEEEEEECTTTTSCSS
T ss_pred             CceEEEEeCCCCCCCCC
Confidence            46899999999999853

>1rku_A Homoserine kinase; phosphoserine phosphatase, phosphoserine:homoserine phosphotransferase, THRH, phosphoserine phosphoryl donor; 1.47A {Pseudomonas aeruginosa} SCOP: c.108.1.11 PDB: 1rkv_A

Probab=84.83  E-value=0.34  Score=40.45  Aligned_cols=31  Identities=23%  Similarity=0.176  Sum_probs=25.8

Q ss_pred             eEeCccHHHHHHHHHhccEEEEEcccccccc
Q 042646          528 VFKRPCCDEFLSFCFERFNVGVWSRGSRKIW  558 (560)
Q Consensus       528 VyKRPhLDEFLdfVsE~FEVVVWTSS~~kYV  558 (560)
                      +..+|++.++|+++.+.|.++|-|++...++
T Consensus        68 ~~~~~g~~~~l~~l~~~~~~~i~s~~~~~~~   98 (206)
T 1rku_A           68 LKPLEGAVEFVDWLRERFQVVILSDTFYEFS   98 (206)
T ss_dssp             CCCCTTHHHHHHHHHTTSEEEEEEEEEHHHH
T ss_pred             cCCCccHHHHHHHHHhcCcEEEEECChHHHH
Confidence            4568999999999998899999998865543

>2gfh_A Haloacid dehalogenase-like hydrolase domain conta; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.90A {Mus musculus} SCOP: c.108.1.6 PDB: 2w4m_A

Probab=84.78  E-value=0.28  Score=43.87  Aligned_cols=29  Identities=10%  Similarity=0.099  Sum_probs=24.8

Q ss_pred             EeCccHHHHHHHHHhccEEEEEccccccc
Q 042646          529 FKRPCCDEFLSFCFERFNVGVWSRGSRKI  557 (560)
Q Consensus       529 yKRPhLDEFLdfVsE~FEVVVWTSS~~kY  557 (560)
                      ...|++.++|+++.+.|.++|.|++...+
T Consensus       121 ~~~~g~~~~L~~L~~~~~l~i~Tn~~~~~  149 (260)
T 2gfh_A          121 ILADDVKAMLTELRKEVRLLLLTNGDRQT  149 (260)
T ss_dssp             CCCHHHHHHHHHHHTTSEEEEEECSCHHH
T ss_pred             CCCcCHHHHHHHHHcCCcEEEEECcChHH
Confidence            45699999999999889999999987654

>3zx4_A MPGP, mannosyl-3-phosphoglycerate phosphatase; hydrolase, haloalkanoid acid dehalogenase-like phosphatase, crystallographic snapshot; HET: 2M8; 1.74A {Thermus thermophilus} PDB: 3zty_A 3zu6_A* 3ztw_A* 3zw7_A* 3zwd_A* 3zwk_A 3zup_A* 3zx5_A*

Probab=84.71  E-value=0.29  Score=43.47  Aligned_cols=14  Identities=36%  Similarity=0.605  Sum_probs=12.9

Q ss_pred             EEEEecCccccccc
Q 042646          497 LLVLDLNGLLVDIV  510 (560)
Q Consensus       497 LLVLDLDETLVHSS  510 (560)
                      |+++||||||+++.
T Consensus         2 li~~DlDGTLl~~~   15 (259)
T 3zx4_A            2 IVFTDLDGTLLDER   15 (259)
T ss_dssp             EEEECCCCCCSCSS
T ss_pred             EEEEeCCCCCcCCC
Confidence            79999999999975

>4dcc_A Putative haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 1.65A {Bacteroides thetaiotaomicron} PDB: 4dfd_A 4f71_A 4f72_A

Probab=84.61  E-value=0.37  Score=41.06  Aligned_cols=28  Identities=14%  Similarity=-0.047  Sum_probs=24.1

Q ss_pred             eCccHHHHHHHHHhccEEEEEccccccc
Q 042646          530 KRPCCDEFLSFCFERFNVGVWSRGSRKI  557 (560)
Q Consensus       530 KRPhLDEFLdfVsE~FEVVVWTSS~~kY  557 (560)
                      ..|++.++|+++.+.|.++|.|.+....
T Consensus       113 ~~~~~~~~l~~l~~~~~~~i~Sn~~~~~  140 (229)
T 4dcc_A          113 IPTYKLDLLLKLREKYVVYLLSNTNDIH  140 (229)
T ss_dssp             CCHHHHHHHHHHTTTSEEEEEECCCHHH
T ss_pred             ccHHHHHHHHHHHhcCcEEEEECCChHH
Confidence            4699999999999889999999887654

>3f9r_A Phosphomannomutase; trypanosome glycobiology structural genomics, isomerase, structural genomics consortium, SGC; 1.85A {Trypanosoma brucei} SCOP: c.108.1.0 PDB: 2i54_A* 2i55_A*

Probab=84.47  E-value=0.36  Score=43.97  Aligned_cols=18  Identities=33%  Similarity=0.510  Sum_probs=15.2

Q ss_pred             CCeEEEEecCcccccccC
Q 042646          494 KKKLLVLDLNGLLVDIVA  511 (560)
Q Consensus       494 KKKLLVLDLDETLVHSSs  511 (560)
                      ..||+++||||||++...
T Consensus         3 ~~kli~~DlDGTLl~~~~   20 (246)
T 3f9r_A            3 KRVLLLFDVDGTLTPPRL   20 (246)
T ss_dssp             CSEEEEECSBTTTBSTTS
T ss_pred             CceEEEEeCcCCcCCCCC
Confidence            368999999999998643

>1rkq_A Hypothetical protein YIDA; two domain structure with beta-alpha sandwich. stucture contains A magnesium ION., PSI, protein structure initiative; 1.40A {Escherichia coli} SCOP: c.108.1.10

Probab=84.23  E-value=0.31  Score=44.21  Aligned_cols=16  Identities=31%  Similarity=0.461  Sum_probs=13.9

Q ss_pred             CeEEEEecCccccccc
Q 042646          495 KKLLVLDLNGLLVDIV  510 (560)
Q Consensus       495 KKLLVLDLDETLVHSS  510 (560)
                      .||+++||||||++..
T Consensus         5 ~kli~~DlDGTLl~~~   20 (282)
T 1rkq_A            5 IKLIAIDMDGTLLLPD   20 (282)
T ss_dssp             CCEEEECCCCCCSCTT
T ss_pred             ceEEEEeCCCCCCCCC
Confidence            4799999999999753

>1y8a_A Hypothetical protein AF1437; structural genomics, protein structu initiative, PSI, midwest center for structural genomics; 1.40A {Archaeoglobus fulgidus} SCOP: c.108.1.24

Probab=84.02  E-value=0.33  Score=45.37  Aligned_cols=30  Identities=17%  Similarity=0.064  Sum_probs=22.1

Q ss_pred             eEeCccHHHHHHHHHhccEEEEEccccccc
Q 042646          528 VFKRPCCDEFLSFCFERFNVGVWSRGSRKI  557 (560)
Q Consensus       528 VyKRPhLDEFLdfVsE~FEVVVWTSS~~kY  557 (560)
                      +..+|.+.++|+++.+.+.++|+|+....|
T Consensus       102 ~~~~~~~~~~l~~l~~g~~~~i~t~~~~~~  131 (332)
T 1y8a_A          102 AKFVPDAEKAMATLQERWTPVVISTSYTQY  131 (332)
T ss_dssp             CCBCTTHHHHHHHHHTTCEEEEEEEEEHHH
T ss_pred             CCCHHHHHHHHHHHHcCCcEEEEECCceEE
Confidence            356788888998887777788888765444

>1u02_A Trehalose-6-phosphate phosphatase related protein; structural genomics, PSI; 1.92A {Thermoplasma acidophilum} SCOP: c.108.1.15

Probab=83.29  E-value=0.4  Score=42.86  Aligned_cols=14  Identities=50%  Similarity=0.807  Sum_probs=12.7

Q ss_pred             eEEEEecCcccccc
Q 042646          496 KLLVLDLNGLLVDI  509 (560)
Q Consensus       496 KLLVLDLDETLVHS  509 (560)
                      +||++||||||+..
T Consensus         2 kli~~DlDGTLl~~   15 (239)
T 1u02_A            2 SLIFLDYDGTLVPI   15 (239)
T ss_dssp             CEEEEECBTTTBCC
T ss_pred             eEEEEecCCCCcCC
Confidence            68999999999974

>2zos_A MPGP, mannosyl-3-phosphoglycerate phosphatase; haloacid dehalogenase like hydrolase, mannosylglycerate, cytoplasm, hydrolase, magnesium; 1.70A {Pyrococcus horikoshii} PDB: 1wzc_A

Probab=83.26  E-value=0.38  Score=43.04  Aligned_cols=12  Identities=33%  Similarity=0.778  Sum_probs=11.6

Q ss_pred             eEEEEecCcccc
Q 042646          496 KLLVLDLNGLLV  507 (560)
Q Consensus       496 KLLVLDLDETLV  507 (560)
                      |++++||||||+
T Consensus         3 kli~~DlDGTLl   14 (249)
T 2zos_A            3 RLIFLDIDKTLI   14 (249)
T ss_dssp             EEEEECCSTTTC
T ss_pred             cEEEEeCCCCcc
Confidence            799999999999

>3k1z_A Haloacid dehalogenase-like hydrolase domain-conta protein 3; HDHD3, haloacid dehalogenase-like hydrolase domain containin structural genomics; 1.55A {Homo sapiens}

Probab=82.68  E-value=0.38  Score=42.41  Aligned_cols=28  Identities=21%  Similarity=0.162  Sum_probs=24.3

Q ss_pred             eEeCccHHHHHHHHHhc-cEEEEEccccc
Q 042646          528 VFKRPCCDEFLSFCFER-FNVGVWSRGSR  555 (560)
Q Consensus       528 VyKRPhLDEFLdfVsE~-FEVVVWTSS~~  555 (560)
                      +...|++.++|+++.+. |.++|.|.+..
T Consensus       105 ~~~~~~~~~~l~~l~~~g~~~~i~tn~~~  133 (263)
T 3k1z_A          105 WQVLDGAEDTLRECRTRGLRLAVISNFDR  133 (263)
T ss_dssp             EEECTTHHHHHHHHHHTTCEEEEEESCCT
T ss_pred             ceECcCHHHHHHHHHhCCCcEEEEeCCcH
Confidence            56889999999999887 99999998654

>4g9b_A Beta-PGM, beta-phosphoglucomutase; HAD, putative phosphoglucomutase, enzyme function initiative structural genomics, isomerase; 1.70A {Escherichia coli}

Probab=82.39  E-value=0.43  Score=42.01  Aligned_cols=25  Identities=20%  Similarity=0.115  Sum_probs=21.2

Q ss_pred             eCccHHHHHHHHHhc-cEEEEEcccc
Q 042646          530 KRPCCDEFLSFCFER-FNVGVWSRGS  554 (560)
Q Consensus       530 KRPhLDEFLdfVsE~-FEVVVWTSS~  554 (560)
                      ..|++.++|+++.++ +-++|.|++.
T Consensus        96 ~~pg~~~ll~~L~~~g~~i~i~t~~~  121 (243)
T 4g9b_A           96 VLPGIRSLLADLRAQQISVGLASVSL  121 (243)
T ss_dssp             BCTTHHHHHHHHHHTTCEEEECCCCT
T ss_pred             ccccHHHHHHhhhcccccceeccccc
Confidence            579999999999765 8899998764

>1s2o_A SPP, sucrose-phosphatase; phosphohydrolase, HAD superfamily, cyanobacteria; 1.40A {Synechocystis SP} SCOP: c.108.1.10 PDB: 1tj3_A 1tj4_A* 1tj5_A* 1u2s_A* 1u2t_A* 2b1q_A* 2b1r_A* 2d2v_A*

Probab=81.49  E-value=0.53  Score=42.10  Aligned_cols=15  Identities=33%  Similarity=0.322  Sum_probs=13.1

Q ss_pred             eEEEEecCccccccc
Q 042646          496 KLLVLDLNGLLVDIV  510 (560)
Q Consensus       496 KLLVLDLDETLVHSS  510 (560)
                      .|+++||||||++..
T Consensus         4 ~li~~DlDGTLl~~~   18 (244)
T 1s2o_A            4 LLLISDLDNTWVGDQ   18 (244)
T ss_dssp             EEEEECTBTTTBSCH
T ss_pred             eEEEEeCCCCCcCCH
Confidence            499999999999853

>1yv9_A Hydrolase, haloacid dehalogenase family; hypothetical protein, struc genomics, PSI, protein structure initiative; 2.80A {Enterococcus faecalis} SCOP: c.108.1.14

Probab=81.44  E-value=0.46  Score=41.64  Aligned_cols=16  Identities=19%  Similarity=0.200  Sum_probs=13.9

Q ss_pred             CCeEEEEecCcccccc
Q 042646          494 KKKLLVLDLNGLLVDI  509 (560)
Q Consensus       494 KKKLLVLDLDETLVHS  509 (560)
                      .-++++|||||||++.
T Consensus         4 ~~k~v~fDlDGTL~~~   19 (264)
T 1yv9_A            4 DYQGYLIDLDGTIYLG   19 (264)
T ss_dssp             SCCEEEECCBTTTEET
T ss_pred             cCCEEEEeCCCeEEeC
Confidence            3579999999999984

>2fea_A 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; 2633731, structural genomics, joint center for structural GE JCSG; HET: MSE; 2.00A {Bacillus subtilis} SCOP: c.108.1.20

Probab=81.42  E-value=0.54  Score=40.92  Aligned_cols=31  Identities=26%  Similarity=0.167  Sum_probs=26.2

Q ss_pred             eEeCccHHHHHHHHHhc-cEEEEEcccccccc
Q 042646          528 VFKRPCCDEFLSFCFER-FNVGVWSRGSRKIW  558 (560)
Q Consensus       528 VyKRPhLDEFLdfVsE~-FEVVVWTSS~~kYV  558 (560)
                      +..+|++.+||+++.+. |.++|-|++...++
T Consensus        76 ~~~~pg~~~~l~~L~~~g~~~~ivS~~~~~~~  107 (236)
T 2fea_A           76 AKIREGFREFVAFINEHEIPFYVISGGMDFFV  107 (236)
T ss_dssp             CCBCTTHHHHHHHHHHHTCCEEEEEEEEHHHH
T ss_pred             CCCCccHHHHHHHHHhCCCeEEEEeCCcHHHH
Confidence            56799999999999876 99999999876543

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	560
d1ta0a_	181	c.108.1.16 (A:) Carboxy-terminal domain RNA polyme	3e-09

>d1ta0a_ c.108.1.16 (A:) Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, NRAMP1 {Human (Homo sapiens) [TaxId: 9606]} Length = 181

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: NLI interacting factor-like phosphatase
domain: Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, NRAMP1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 54.3 bits (130), Expect = 3e-09
 Identities = 21/72 (29%), Positives = 28/72 (38%), Gaps = 6/72 (8%)

Query: 492 HSKKKLLVLDLNGLLVDIVASP------YHRYRPDKMVSNKAVFKRPCCDEFLSFCFERF 545
            S K  +V+DL+  LV     P            D +V    V KRP  DEFL    E F
Sbjct: 12  DSDKICVVIDLDETLVHSSFKPVNNADFIIPVEIDGVVHQVYVLKRPHVDEFLQRMGELF 71

Query: 546 NVGVWSRGSRKI 557
              +++    K 
Sbjct: 72  ECVLFTASLAKY 83

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	560
d1ta0a_	181	Carboxy-terminal domain RNA polymerase II polypept	99.76
d1ltqa1	149	Polynucleotide kinase, phosphatase domain {Bacteri	97.89
d1u7pa_	164	Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mu	97.62
d1xpja_	124	Hypothetical protein VC0232 {Vibrio cholerae [TaxI	96.35
d2obba1	122	Hypothetical protein BT0820 {Bacteroides thetaiota	95.94
d2fpwa1	161	Histidine biosynthesis bifunctional protein HisB,	95.91
d1j97a_	210	Phosphoserine phosphatase {Archaeon Methanococcus	95.54
d1yj5a1	195	5' polynucleotide kinase-3' phosphatase, middle do	95.47
d2amya1	243	Phosphomannomutase 2 {Human (Homo sapiens) [TaxId:	95.45
d2o2xa1	209	Hypothetical protein Mll2559 {Mesorhizobium loti [	93.95
d2hcfa1	228	Hypothetical protein CT1708 {Chlorobium tepidum [T	92.62
d1nnla_	217	Phosphoserine phosphatase {Human (Homo sapiens) [T	92.3
d2fuea1	244	Phosphomannomutase 1 {Human (Homo sapiens) [TaxId:	92.27
d1rkua_	206	Homoserine kinase ThrH {Pseudomonas aeruginosa [Ta	91.95
d2hsza1	224	Phosphoglycolate phosphatase Gph {Haemophilus somn	91.23
d1wzca1	243	Putative mannosyl-3-phosphoglycerate phosphatase M	90.56
d2feaa1	226	2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate	90.27
d2b30a1	283	PFL1270w orthologue {Plasmodium vivax [TaxId: 5855	90.12
d1wr8a_	230	Phosphoglycolate phosphatase, PGPase {Pyrococcus h	90.1
d2ah5a1	210	predicted phosphatase SP0104 {Streptococcus pneumo	89.84
d1nrwa_	285	Hypothetical protein YwpJ {Bacillus subtilis [TaxI	89.25
d2fdra1	222	Hypothetical protein Atu0790 {Agrobacterium tumefa	89.23
d1s2oa1	244	Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc	89.18
d1xvia_	232	Putative mannosyl-3-phosphoglycerate phosphatase M	88.86
d2b0ca1	197	Putative phosphatase YihX {Escherichia coli [TaxId	88.51
d1rkqa_	271	Hypothetical protein YidA {Escherichia coli [TaxId	88.49
d2hdoa1	207	Phosphoglycolate phosphatase {Lactobacillus planta	88.32
d2go7a1	204	Hypothetical protein SP2064 {Streptococcus pneumon	87.79
d1zrna_	220	L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., s	87.4
d1u02a_	229	Trehalose-6-phosphate phosphatase related protein	86.23
d1o08a_	221	beta-Phosphoglucomutase {Lactococcus lactis [TaxId	85.82
d1nf2a_	267	Hypothetical protein TM0651 {Thermotoga maritima [	85.74
d1l6ra_	225	Phosphoglycolate phosphatase, PGPase {Archaeon The	84.43
d1rlma_	269	Sugar phosphatase SupH (YbiV) {Escherichia coli [T	84.43
d1cr6a1	222	Epoxide hydrolase, N-terminal domain {Mouse (Mus m	84.11
d2fi1a1	187	Putative hydrolase SP0805 {Streptococcus pneumonia	84.01
d1zd3a1	225	Epoxide hydrolase, N-terminal domain {Human (Homo	83.71
d1vjra_	261	Hypothetical protein TM1742 {Thermotoga maritima [	83.13
d1zs9a1	253	E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]}	83.12
d1te2a_	218	Phosphatase YniC {Escherichia coli [TaxId: 562]}	82.51
d2rbka1	260	Sugar-phosphate phosphatase BT4131 {Bacteroides th	82.24
d1wvia_	253	Putative phosphatase SMU.1415c {Streptococcus muta	82.1
d2g80a1	225	Protein UTR4 {Baker's yeast (Saccharomyces cerevis	81.05
d2c4na1	250	NagD {Escherichia coli [TaxId: 562]}	80.75
d2gfha1	247	N-acylneuraminate-9-phosphatase NANP {Mouse (Mus m	80.51

>d1ta0a_ c.108.1.16 (A:) Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, NRAMP1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: NLI interacting factor-like phosphatase
domain: Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, NRAMP1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.76  E-value=1.6e-19  Score=159.00  Aligned_cols=74  Identities=28%  Similarity=0.289  Sum_probs=59.1

Q ss_pred             CCCCCCCCCCeEEEEecCcccccccCCCCCCCC------CCeeeccceeEeCccHHHHHHHHHhccEEEEEccccccccc
Q 042646          486 GNVCIGHSKKKLLVLDLNGLLVDIVASPYHRYR------PDKMVSNKAVFKRPCCDEFLSFCFERFNVGVWSRGSRKIWT  559 (560)
Q Consensus       486 ~r~~i~~~KKKLLVLDLDETLVHSSskpp~g~k------PDfkV~~yyVyKRPhLDEFLdfVsE~FEVVVWTSS~~kYVd  559 (560)
                      .+......+|++|||||||||||++..+.....      .+.....++|++|||+++||++|+++|+|+||||+++.||+
T Consensus         6 p~~~~~~~~k~~LVLDLDeTLihs~~~~~~~~~~~~~~~~~~~~~~~~v~~RP~l~eFL~~l~~~yei~I~Ta~~~~YA~   85 (181)
T d1ta0a_           6 PEAKAQDSDKICVVIDLDETLVHSSFKPVNNADFIIPVEIDGVVHQVYVLKRPHVDEFLQRMGELFECVLFTASLAKYAD   85 (181)
T ss_dssp             CCCCGGGTTSCEEEECCBTTTEEEESSCCTTCSEEEEEEETTEEEEEEEEECTTHHHHHHHHHHHSEEEEECSSCHHHHH
T ss_pred             CCCCcccCCCeEEEEeCCCCEEccccCCCCCccceeeecccceeeeeEEecCCCHHHHHHHHHhceEEEEEcCCcHHHHH
Confidence            333444458999999999999999877654221      12223567999999999999999999999999999999985

>d1ltqa1 c.108.1.9 (A:153-301) Polynucleotide kinase, phosphatase domain {Bacteriophage T4 [TaxId: 10665]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: phosphatase domain of polynucleotide kinase
domain: Polynucleotide kinase, phosphatase domain
species: Bacteriophage T4 [TaxId: 10665]

Probab=97.89  E-value=8.9e-06  Score=64.67  Aligned_cols=62  Identities=16%  Similarity=0.132  Sum_probs=44.8

Q ss_pred             CCCCeEEEEecCcccccccCCCCCCCCCCeeeccceeEeCccHHHHHHHHHhc-cEEEEEcccccccc
Q 042646          492 HSKKKLLVLDLNGLLVDIVASPYHRYRPDKMVSNKAVFKRPCCDEFLSFCFER-FNVGVWSRGSRKIW  558 (560)
Q Consensus       492 ~~KKKLLVLDLDETLVHSSskpp~g~kPDfkV~~yyVyKRPhLDEFLdfVsE~-FEVVVWTSS~~kYV  558 (560)
                      +.++|++||||||||+++......  .++.   -......|++.++|+.+.+. |.|+|.|+....+.
T Consensus         4 ~~kpk~vifDiDgTL~~~~~~~~~--~~~~---~~~~~~~p~v~~~l~~l~~~G~~Iii~T~R~~~~~   66 (149)
T d1ltqa1           4 PGKPKAVIFDVDGTLAKMNGRGPY--DLEK---CDTDVINPMVVELSKMYALMGYQIVVVSGRESGTK   66 (149)
T ss_dssp             TTSCEEEEEETBTTTBCCSSCCTT--CGGG---GGGCCBCHHHHHHHHHHHHTTCEEEEEECSCCCCS
T ss_pred             CCCCcEEEEEcCCCcEeCCCCCcC--Cccc---cccCccCHHHHHHHHHHHhccCeEEEEecCcHHHH
Confidence            357899999999999987543221  1111   11234579999999999885 99999999876553

>d1u7pa_ c.108.1.17 (A:) Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Magnesium-dependent phosphatase-1, Mdp1
domain: Magnesium-dependent phosphatase-1, Mdp1
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.62  E-value=3.4e-05  Score=63.67  Aligned_cols=61  Identities=25%  Similarity=0.135  Sum_probs=42.4

Q ss_pred             CeEEEEecCcccccccCCCCC--C--CCCCeee---ccceeEeCccHHHHHHHHHhc-cEEEEEccccc
Q 042646          495 KKLLVLDLNGLLVDIVASPYH--R--YRPDKMV---SNKAVFKRPCCDEFLSFCFER-FNVGVWSRGSR  555 (560)
Q Consensus       495 KKLLVLDLDETLVHSSskpp~--g--~kPDfkV---~~yyVyKRPhLDEFLdfVsE~-FEVVVWTSS~~  555 (560)
                      +|++|||||||||+.......  .  ...+..+   ....+..+|++.++|+++.+. |.++|-|++..
T Consensus         5 pK~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~pgv~e~L~~L~~~G~~~~v~S~~~~   73 (164)
T d1u7pa_           5 PKLAVFDLDYTLWPFWVDTHVDPPFHKSSDGTVRDRRGQNIQLYPEVPEVLGRLQSLGVPVAAASRTSE   73 (164)
T ss_dssp             CSEEEECCBTTTBSSCTTTTCCSCEEECTTSCEEETTCCEECCCTTHHHHHHHHHHTTCCEEEEECCSC
T ss_pred             CCEEEEcCCCcccCCccccccCccHhHHhcchHhhhhccccccchHHHHHHHHHHHCCCcEEEEecccc
Confidence            589999999999986432110  0  0111111   223567889999999999988 99999997654

>d1xpja_ c.108.1.18 (A:) Hypothetical protein VC0232 {Vibrio cholerae [TaxId: 666]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Hypothetical protein VC0232
domain: Hypothetical protein VC0232
species: Vibrio cholerae [TaxId: 666]

Probab=96.35  E-value=0.0014  Score=55.19  Aligned_cols=48  Identities=27%  Similarity=0.339  Sum_probs=36.1

Q ss_pred             eEEEEecCcccccccCCCCCCCCCCeeeccceeEeCccHHHHHHHHHhc-cEEEEEcccc
Q 042646          496 KLLVLDLNGLLVDIVASPYHRYRPDKMVSNKAVFKRPCCDEFLSFCFER-FNVGVWSRGS  554 (560)
Q Consensus       496 KLLVLDLDETLVHSSskpp~g~kPDfkV~~yyVyKRPhLDEFLdfVsE~-FEVVVWTSS~  554 (560)
                      |.+++||||||++......           ...-..|.+-++|.++.+. |.|+||||+.
T Consensus         2 K~i~~DiDGTI~~~~~~~y-----------~~~~P~~~~Ie~l~~l~~~G~~Iii~TaR~   50 (124)
T d1xpja_           2 KKLIVDLDGTLTQANTSDY-----------RNVLPRLDVIEQLREYHQLGFEIVISTARN   50 (124)
T ss_dssp             CEEEECSTTTTBCCCCSCG-----------GGCCBCHHHHHHHHHHHHTTCEEEEEECTT
T ss_pred             CEEEEeCCCCeECCCCCCc-----------CccCcCHHHHHHHHHHHHCCCEEEEEecCC
Confidence            6799999999987432111           1234678889999999655 9999999984

>d2obba1 c.108.1.25 (A:1-122) Hypothetical protein BT0820 {Bacteroides thetaiotaomicron [TaxId: 818]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: BT0820-like
domain: Hypothetical protein BT0820
species: Bacteroides thetaiotaomicron [TaxId: 818]

Probab=95.94  E-value=0.0031  Score=52.41  Aligned_cols=47  Identities=19%  Similarity=0.294  Sum_probs=35.4

Q ss_pred             EEEEecCcccccccCCCCCCCCCCeeeccceeEeCccHHHHHHHHHhc-cEEEEEcccccc
Q 042646          497 LLVLDLNGLLVDIVASPYHRYRPDKMVSNKAVFKRPCCDEFLSFCFER-FNVGVWSRGSRK  556 (560)
Q Consensus       497 LLVLDLDETLVHSSskpp~g~kPDfkV~~yyVyKRPhLDEFLdfVsE~-FEVVVWTSS~~k  556 (560)
                      ++++||||||++...       ++      +.-..|.+-++|+.+.+. |.|++|||+...
T Consensus         2 ti~vDiDGTl~~~~~-------~~------~~kPi~~~Ie~l~~L~~~G~~IIi~TaR~~~   49 (122)
T d2obba1           2 TIAVDFDGTIVEHRY-------PR------IGEEIPFAVETLKLLQQEKHRLILWSVREGE   49 (122)
T ss_dssp             EEEECCBTTTBCSCT-------TS------CCCBCTTHHHHHHHHHHTTCEEEECCSCCHH
T ss_pred             EEEEEcCCCcCCCCC-------Cc------cccccHHHHHHHHHHHHCCCeEEEEecCCCc
Confidence            689999999976321       11      112468899999999866 999999998654

>d2fpwa1 c.108.1.19 (A:3-163) Histidine biosynthesis bifunctional protein HisB, phosphatase domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Histidinol phosphatase-like
domain: Histidine biosynthesis bifunctional protein HisB, phosphatase domain
species: Escherichia coli [TaxId: 562]

Probab=95.91  E-value=0.0039  Score=52.61  Aligned_cols=53  Identities=17%  Similarity=0.179  Sum_probs=37.9

Q ss_pred             CeEEEEecCcccccccCCCCCCCCCCeeeccceeEeCccHHHHHHHHHhc-cEEEEEccc
Q 042646          495 KKLLVLDLNGLLVDIVASPYHRYRPDKMVSNKAVFKRPCCDEFLSFCFER-FNVGVWSRG  553 (560)
Q Consensus       495 KKLLVLDLDETLVHSSskpp~g~kPDfkV~~yyVyKRPhLDEFLdfVsE~-FEVVVWTSS  553 (560)
                      +|.|+||.||||+.-.....   ..+   ..-.+..-|++.+.|+.+.+. |.++|.|..
T Consensus         2 ~K~i~~D~DGtL~~~~~~~~---~~~---~~~~~~~~pgv~e~L~~L~~~g~~l~i~TNq   55 (161)
T d2fpwa1           2 QKYLFIDRDGTLISEPPSDF---QVD---RFDKLAFEPGVIPQLLKLQKAGYKLVMITNQ   55 (161)
T ss_dssp             CEEEEECCBTTTBCCC--CC---CCC---SGGGCCBCTTHHHHHHHHHHTTEEEEEEEEC
T ss_pred             CcEEEEeCCCCeEeeCCCCC---ccC---CHHHceECccHHHHHHHHHHcCCceeeeccc
Confidence            79999999999997432111   011   111356789999999999976 999999863

>d1j97a_ c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Phosphoserine phosphatase
domain: Phosphoserine phosphatase
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=95.54  E-value=0.0022  Score=50.83  Aligned_cols=31  Identities=19%  Similarity=0.118  Sum_probs=23.3

Q ss_pred             eeEeCccHHHHHHHHHhc-cEEEEEccccccc
Q 042646          527 AVFKRPCCDEFLSFCFER-FNVGVWSRGSRKI  557 (560)
Q Consensus       527 yVyKRPhLDEFLdfVsE~-FEVVVWTSS~~kY  557 (560)
                      .+...+++.++++++..+ +.+++.|+....+
T Consensus        73 ~~~~~~~~~~~i~~l~~~~~~~~~~~~~~~~~  104 (210)
T d1j97a_          73 RITPTEGAEETIKELKNRGYVVAVVSGGFDIA  104 (210)
T ss_dssp             TCCBCTTHHHHHHHHHHTTCEEEEEEEEEHHH
T ss_pred             hhhhhhhHHHHHHHHHHcCCEEEeeccccccc
Confidence            456788899999999877 7777777665443

>d1yj5a1 c.108.1.9 (A:144-338) 5' polynucleotide kinase-3' phosphatase, middle domain {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: phosphatase domain of polynucleotide kinase
domain: 5' polynucleotide kinase-3' phosphatase, middle domain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=95.47  E-value=0.012  Score=52.13  Aligned_cols=55  Identities=15%  Similarity=0.212  Sum_probs=39.8

Q ss_pred             CCCeEEEEecCcccccccCCCCCCCCCCeeeccceeEeCccHHHHHHHHHhc-cEEEEEcc
Q 042646          493 SKKKLLVLDLNGLLVDIVASPYHRYRPDKMVSNKAVFKRPCCDEFLSFCFER-FNVGVWSR  552 (560)
Q Consensus       493 ~KKKLLVLDLDETLVHSSskpp~g~kPDfkV~~yyVyKRPhLDEFLdfVsE~-FEVVVWTS  552 (560)
                      +.+|.++||+||||+.......-...++-     .++..|.+.+.|+++.+. |.|+|.|-
T Consensus        19 ~~~Kia~fDrDGtLik~~~~~~~~~~~~d-----~~~l~~~v~~~i~~L~~~gy~iiIvTN   74 (195)
T d1yj5a1          19 PQGKVAAFDLDGTLITTRSGKVFPTSPSD-----WRILYPEIPKKLQELAAEGYKLVIFTN   74 (195)
T ss_dssp             CCSCEEEECSBTTTEECSSSCSSCSSTTC-----CEESCTTHHHHHHHHHHHTCEEEEEEE
T ss_pred             CcCcEEEEECCCceEeeCCCCcCCCChhh-----ceeccCCHHHHHHHHHhCCcEEEEecC
Confidence            46899999999999975432111112221     467799999999999876 99999984

>d2amya1 c.108.1.10 (A:4-246) Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Phosphomannomutase 2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.45  E-value=0.003  Score=50.98  Aligned_cols=18  Identities=22%  Similarity=0.329  Sum_probs=15.8

Q ss_pred             CCCeEEEEecCccccccc
Q 042646          493 SKKKLLVLDLNGLLVDIV  510 (560)
Q Consensus       493 ~KKKLLVLDLDETLVHSS  510 (560)
                      +++||+++||||||++..
T Consensus         1 ~~~kl~~fDlDGTLl~~~   18 (243)
T d2amya1           1 PGPALCLFDVDGTLTAPR   18 (243)
T ss_dssp             CCSEEEEEESBTTTBCTT
T ss_pred             CCCEEEEEcCcCCeeCCC
Confidence            478999999999999864

>d2o2xa1 c.108.1.19 (A:8-216) Hypothetical protein Mll2559 {Mesorhizobium loti [TaxId: 381]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Histidinol phosphatase-like
domain: Hypothetical protein Mll2559
species: Mesorhizobium loti [TaxId: 381]

Probab=93.95  E-value=0.024  Score=49.47  Aligned_cols=50  Identities=20%  Similarity=0.163  Sum_probs=36.5

Q ss_pred             CCeEEEEecCcccccccCCCCCCCCCCeeeccceeEeCccHHHHHHHHHhc-cEEEEEcc
Q 042646          494 KKKLLVLDLNGLLVDIVASPYHRYRPDKMVSNKAVFKRPCCDEFLSFCFER-FNVGVWSR  552 (560)
Q Consensus       494 KKKLLVLDLDETLVHSSskpp~g~kPDfkV~~yyVyKRPhLDEFLdfVsE~-FEVVVWTS  552 (560)
                      +-+-|+||+||||++......   .++      .+..-|++.+.|+++.+. |.++|.|.
T Consensus        22 ~~~Aif~DrDGtl~~~~~y~~---~~~------~~~l~pgv~e~L~~L~~~G~~l~IvTN   72 (209)
T d2o2xa1          22 HLPALFLDRDGTINVDTDYPS---DPA------EIVLRPQMLPAIATANRAGIPVVVVTN   72 (209)
T ss_dssp             SCCCEEECSBTTTBCCCSCTT---CGG------GCCBCGGGHHHHHHHHHHTCCEEEEEE
T ss_pred             CCCEEEEeCCCCeECCCCCCC---CHH------HeEecccHHHHHHHHHhhCCeEEEecc
Confidence            456799999999998532111   122      234569999999999986 99999984

>d2hcfa1 c.108.1.6 (A:2-229) Hypothetical protein CT1708 {Chlorobium tepidum [TaxId: 1097]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Hypothetical protein CT1708
species: Chlorobium tepidum [TaxId: 1097]

Probab=92.62  E-value=0.018  Score=47.43  Aligned_cols=31  Identities=13%  Similarity=0.014  Sum_probs=24.4

Q ss_pred             eEeCccHHHHHHHHHhc--cEEEEEcccccccc
Q 042646          528 VFKRPCCDEFLSFCFER--FNVGVWSRGSRKIW  558 (560)
Q Consensus       528 VyKRPhLDEFLdfVsE~--FEVVVWTSS~~kYV  558 (560)
                      +...|++.++|+.+.+.  +.++|.|+....++
T Consensus        90 ~~~~~g~~~~L~~L~~~g~~~~~v~t~~~~~~~  122 (228)
T d2hcfa1          90 ITLLEGVRELLDALSSRSDVLLGLLTGNFEASG  122 (228)
T ss_dssp             EEECTTHHHHHHHHHTCTTEEEEEECSSCHHHH
T ss_pred             ceecCchHHHHhhhhccccccccccCCCcchhh
Confidence            34568999999999875  67889998866543

>d1nnla_ c.108.1.4 (A:) Phosphoserine phosphatase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Phosphoserine phosphatase
domain: Phosphoserine phosphatase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.30  E-value=0.031  Score=47.36  Aligned_cols=32  Identities=31%  Similarity=0.222  Sum_probs=27.3

Q ss_pred             eeEeCccHHHHHHHHHhc-cEEEEEcccccccc
Q 042646          527 AVFKRPCCDEFLSFCFER-FNVGVWSRGSRKIW  558 (560)
Q Consensus       527 yVyKRPhLDEFLdfVsE~-FEVVVWTSS~~kYV  558 (560)
                      .+..+|++.+|++++.++ +.++|=|++...+|
T Consensus        80 ~~~l~pg~~~~i~~lk~~G~~~~ivS~~~~~~v  112 (217)
T d1nnla_          80 PPHLTPGIRELVSRLQERNVQVFLISGGFRSIV  112 (217)
T ss_dssp             CCCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHH
T ss_pred             ccccCHHHHHHHHHHHhCCCEEEEECCCchHHH
Confidence            456789999999999986 99999999876654

>d2fuea1 c.108.1.10 (A:13-256) Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Phosphomannomutase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.27  E-value=0.022  Score=45.46  Aligned_cols=16  Identities=31%  Similarity=0.559  Sum_probs=12.3

Q ss_pred             eEEEE-ecCcccccccC
Q 042646          496 KLLVL-DLNGLLVDIVA  511 (560)
Q Consensus       496 KLLVL-DLDETLVHSSs  511 (560)
                      |+|+| ||||||++...
T Consensus         1 k~i~lFDlDGTLl~~~~   17 (244)
T d2fuea1           1 RVLCLFDVDGTLTPARQ   17 (244)
T ss_dssp             CEEEEEESBTTTBSTTS
T ss_pred             CEEEEEccccCccCCCC
Confidence            56675 99999998643

>d1rkua_ c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Homoserine kinase ThrH
domain: Homoserine kinase ThrH
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=91.95  E-value=0.026  Score=44.46  Aligned_cols=28  Identities=25%  Similarity=0.236  Sum_probs=21.0

Q ss_pred             eeEeCccHHHHHHHHHhccEEEEEcccc
Q 042646          527 AVFKRPCCDEFLSFCFERFNVGVWSRGS  554 (560)
Q Consensus       527 yVyKRPhLDEFLdfVsE~FEVVVWTSS~  554 (560)
                      .+...|+...++.++...+.+++.|.+-
T Consensus        67 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~   94 (206)
T d1rkua_          67 TLKPLEGAVEFVDWLRERFQVVILSDTF   94 (206)
T ss_dssp             TCCCCTTHHHHHHHHHTTSEEEEEEEEE
T ss_pred             hccccchHHHHHHHhhcCceEEEeccCc
Confidence            4567788888888888778887777653

>d2hsza1 c.108.1.6 (A:1-224) Phosphoglycolate phosphatase Gph {Haemophilus somnus [TaxId: 731]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Phosphoglycolate phosphatase Gph
species: Haemophilus somnus [TaxId: 731]

Probab=91.23  E-value=0.029  Score=45.14  Aligned_cols=32  Identities=16%  Similarity=0.024  Sum_probs=26.9

Q ss_pred             eeEeCccHHHHHHHHHhc-cEEEEEcccccccc
Q 042646          527 AVFKRPCCDEFLSFCFER-FNVGVWSRGSRKIW  558 (560)
Q Consensus       527 yVyKRPhLDEFLdfVsE~-FEVVVWTSS~~kYV  558 (560)
                      .....|++.++|+++.+. +.++|.|.+...++
T Consensus        93 ~~~l~~~~~~~L~~L~~~g~~~~i~tn~~~~~~  125 (224)
T d2hsza1          93 ISRLYPNVKETLEALKAQGYILAVVTNKPTKHV  125 (224)
T ss_dssp             SCEECTTHHHHHHHHHHTTCEEEEECSSCHHHH
T ss_pred             ccchHHHHHHHHHHHhccCCcccccccccHHHH
Confidence            456789999999999877 99999999877654

>d1wzca1 c.108.1.10 (A:1-243) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP)
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=90.56  E-value=0.039  Score=44.86  Aligned_cols=15  Identities=27%  Similarity=0.461  Sum_probs=13.3

Q ss_pred             CeEEEEecCcccccc
Q 042646          495 KKLLVLDLNGLLVDI  509 (560)
Q Consensus       495 KKLLVLDLDETLVHS  509 (560)
                      -|+|++||||||++.
T Consensus         2 iKli~~DlDGTLl~~   16 (243)
T d1wzca1           2 IRLIFLDIDKTLIPG   16 (243)
T ss_dssp             EEEEEECCBTTTBSS
T ss_pred             cEEEEEeCCCCCCCC
Confidence            389999999999975

>d2feaa1 c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: MtnX-like
domain: 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX
species: Bacillus subtilis [TaxId: 1423]

Probab=90.27  E-value=0.049  Score=44.55  Aligned_cols=32  Identities=25%  Similarity=0.158  Sum_probs=26.7

Q ss_pred             eeEeCccHHHHHHHHHhc-cEEEEEcccccccc
Q 042646          527 AVFKRPCCDEFLSFCFER-FNVGVWSRGSRKIW  558 (560)
Q Consensus       527 yVyKRPhLDEFLdfVsE~-FEVVVWTSS~~kYV  558 (560)
                      .+-.+|++.+||+++.+. +.++|.|++...++
T Consensus        73 ~~~l~pg~~~~l~~L~~~g~~~~ivS~~~~~~i  105 (226)
T d2feaa1          73 DAKIREGFREFVAFINEHEIPFYVISGGMDFFV  105 (226)
T ss_dssp             HCCBCTTHHHHHHHHHHHTCCEEEEEEEEHHHH
T ss_pred             ccchhHHHHHHHHHHHhcccccccCCcchhhhH
Confidence            355899999999999766 99999999877654

>d2b30a1 c.108.1.10 (A:18-300) PFL1270w orthologue {Plasmodium vivax [TaxId: 5855]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: PFL1270w orthologue
species: Plasmodium vivax [TaxId: 5855]

Probab=90.12  E-value=0.11  Score=43.04  Aligned_cols=15  Identities=40%  Similarity=0.658  Sum_probs=12.9

Q ss_pred             CCeEEEEecCccccc
Q 042646          494 KKKLLVLDLNGLLVD  508 (560)
Q Consensus       494 KKKLLVLDLDETLVH  508 (560)
                      .=|||++||||||+.
T Consensus         9 ~ikli~~DlDGTLl~   23 (283)
T d2b30a1           9 DIKLLLIDFDGTLFV   23 (283)
T ss_dssp             CCCEEEEETBTTTBC
T ss_pred             CccEEEEECCCCCcC
Confidence            457999999999984

>d1wr8a_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Phosphoglycolate phosphatase, PGPase
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=90.10  E-value=0.054  Score=43.49  Aligned_cols=16  Identities=19%  Similarity=0.308  Sum_probs=13.9

Q ss_pred             CeEEEEecCccccccc
Q 042646          495 KKLLVLDLNGLLVDIV  510 (560)
Q Consensus       495 KKLLVLDLDETLVHSS  510 (560)
                      -|++++||||||++..
T Consensus         2 iK~i~~D~DGTL~~~~   17 (230)
T d1wr8a_           2 IKAISIDIDGTITYPN   17 (230)
T ss_dssp             CCEEEEESTTTTBCTT
T ss_pred             ceEEEEecCCCCcCCC
Confidence            4799999999999854

>d2ah5a1 c.108.1.6 (A:1-210) predicted phosphatase SP0104 {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: predicted phosphatase SP0104
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=89.84  E-value=0.046  Score=44.09  Aligned_cols=32  Identities=6%  Similarity=-0.089  Sum_probs=26.6

Q ss_pred             eeEeCccHHHHHHHHHhccEEEEEcccccccc
Q 042646          527 AVFKRPCCDEFLSFCFERFNVGVWSRGSRKIW  558 (560)
Q Consensus       527 yVyKRPhLDEFLdfVsE~FEVVVWTSS~~kYV  558 (560)
                      ..-..|++.++|+.+...+.++|-|++...++
T Consensus        82 ~~~~~~~~~~~l~~l~~~~~~~i~t~~~~~~~  113 (210)
T d2ah5a1          82 EAQLFPQIIDLLEELSSSYPLYITTTKDTSTA  113 (210)
T ss_dssp             SCEECTTHHHHHHHHHTTSCEEEEEEEEHHHH
T ss_pred             cccchhHHHHHHhhhhcccchhhcccccchhh
Confidence            45678999999999999999999998765543

>d1nrwa_ c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Hypothetical protein YwpJ
species: Bacillus subtilis [TaxId: 1423]

Probab=89.25  E-value=0.058  Score=45.33  Aligned_cols=16  Identities=38%  Similarity=0.684  Sum_probs=13.7

Q ss_pred             eEEEEecCcccccccC
Q 042646          496 KLLVLDLNGLLVDIVA  511 (560)
Q Consensus       496 KLLVLDLDETLVHSSs  511 (560)
                      ||+++||||||++...
T Consensus         2 Kli~~DlDGTLl~~~~   17 (285)
T d1nrwa_           2 KLIAIDLDGTLLNSKH   17 (285)
T ss_dssp             CEEEEECCCCCSCTTS
T ss_pred             eEEEEECCccccCCCC
Confidence            6999999999997543

>d2fdra1 c.108.1.6 (A:3-224) Hypothetical protein Atu0790 {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Hypothetical protein Atu0790
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=89.23  E-value=0.056  Score=43.93  Aligned_cols=29  Identities=17%  Similarity=-0.167  Sum_probs=19.3

Q ss_pred             eeEeCccHHHHHHHHHhccEEEEEccccccc
Q 042646          527 AVFKRPCCDEFLSFCFERFNVGVWSRGSRKI  557 (560)
Q Consensus       527 yVyKRPhLDEFLdfVsE~FEVVVWTSS~~kY  557 (560)
                      .+...|++.++|+.+...+  +|-|++...+
T Consensus        83 ~~~~~~g~~~~L~~l~~~~--~i~t~~~~~~  111 (222)
T d2fdra1          83 DVKIIDGVKFALSRLTTPR--CICSNSSSHR  111 (222)
T ss_dssp             HCCBCTTHHHHHHHCCSCE--EEEESSCHHH
T ss_pred             ccchhhhHHHHhhhccccc--eeeeecchhh
Confidence            3566788888888886654  4556655544

>d1s2oa1 c.108.1.10 (A:1-244) Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc 6803 [TaxId: 1148]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Sucrose-phosphatase Slr0953
species: Synechocystis sp. pcc 6803 [TaxId: 1148]

Probab=89.18  E-value=0.064  Score=44.62  Aligned_cols=16  Identities=31%  Similarity=0.420  Sum_probs=13.8

Q ss_pred             CCeEEEEecCcccccc
Q 042646          494 KKKLLVLDLNGLLVDI  509 (560)
Q Consensus       494 KKKLLVLDLDETLVHS  509 (560)
                      ++.||++||||||++.
T Consensus         2 ~~~li~~DlDGTL~~~   17 (244)
T d1s2oa1           2 RQLLLISDLDNTWVGD   17 (244)
T ss_dssp             CSEEEEECTBTTTBSC
T ss_pred             CceEEEEECcccCCCC
Confidence            5778999999999974

>d1xvia_ c.108.1.10 (A:) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP)
species: Escherichia coli [TaxId: 562]

Probab=88.86  E-value=0.11  Score=41.59  Aligned_cols=18  Identities=33%  Similarity=0.493  Sum_probs=13.7

Q ss_pred             CCeEEEEecCcccccccC
Q 042646          494 KKKLLVLDLNGLLVDIVA  511 (560)
Q Consensus       494 KKKLLVLDLDETLVHSSs  511 (560)
                      ++.|++.||||||++...
T Consensus         3 ~~~li~~DlDGTLl~~~~   20 (232)
T d1xvia_           3 QPLLVFSDLDGTLLDSHS   20 (232)
T ss_dssp             CCEEEEEECTTTTSCSSC
T ss_pred             CCEEEEEECCCCccCCcC
Confidence            355777799999998643

>d2b0ca1 c.108.1.2 (A:8-204) Putative phosphatase YihX {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: YihX-like
domain: Putative phosphatase YihX
species: Escherichia coli [TaxId: 562]

Probab=88.51  E-value=0.065  Score=41.01  Aligned_cols=33  Identities=24%  Similarity=0.012  Sum_probs=25.4

Q ss_pred             ceeEeCccHHHHHHHHHh-ccEEEEEcccccccc
Q 042646          526 KAVFKRPCCDEFLSFCFE-RFNVGVWSRGSRKIW  558 (560)
Q Consensus       526 yyVyKRPhLDEFLdfVsE-~FEVVVWTSS~~kYV  558 (560)
                      .....+|++.+++..+.. .+.++|.|++....+
T Consensus        81 ~~~~~~~~~~~l~~~l~~~~~~~~i~t~~~~~~~  114 (197)
T d2b0ca1          81 VFVALRPEVIAIMHKLREQGHRVVVLSNTNRLHT  114 (197)
T ss_dssp             CEEEECHHHHHHHHHHHHTTCEEEEEECCCCCTT
T ss_pred             hccccCchhHHHHHHHHhcCCeEEEEeCccHHHH
Confidence            456788899999988865 488888888766544

>d1rkqa_ c.108.1.10 (A:) Hypothetical protein YidA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Hypothetical protein YidA
species: Escherichia coli [TaxId: 562]

Probab=88.49  E-value=0.073  Score=44.52  Aligned_cols=16  Identities=31%  Similarity=0.461  Sum_probs=14.2

Q ss_pred             CeEEEEecCccccccc
Q 042646          495 KKLLVLDLNGLLVDIV  510 (560)
Q Consensus       495 KKLLVLDLDETLVHSS  510 (560)
                      .|||++||||||++..
T Consensus         4 iKli~~DlDGTL~~~~   19 (271)
T d1rkqa_           4 IKLIAIDMDGTLLLPD   19 (271)
T ss_dssp             CCEEEECCCCCCSCTT
T ss_pred             eeEEEEeCCccccCCC
Confidence            6899999999999754

>d2hdoa1 c.108.1.6 (A:1-207) Phosphoglycolate phosphatase {Lactobacillus plantarum [TaxId: 1590]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Phosphoglycolate phosphatase
species: Lactobacillus plantarum [TaxId: 1590]

Probab=88.32  E-value=0.066  Score=43.44  Aligned_cols=31  Identities=10%  Similarity=0.118  Sum_probs=26.1

Q ss_pred             eeEeCccHHHHHHHHHhccEEEEEccccccc
Q 042646          527 AVFKRPCCDEFLSFCFERFNVGVWSRGSRKI  557 (560)
Q Consensus       527 yVyKRPhLDEFLdfVsE~FEVVVWTSS~~kY  557 (560)
                      .+-.+|++.+||+++.+.+.++|-|++....
T Consensus        80 ~~~~~~g~~~~L~~l~~~~~~~ivT~~~~~~  110 (207)
T d2hdoa1          80 QIELYPGITSLFEQLPSELRLGIVTSQRRNE  110 (207)
T ss_dssp             GCEECTTHHHHHHHSCTTSEEEEECSSCHHH
T ss_pred             ccccccchhhhhhhhcccccccccccccccc
Confidence            3557799999999999999999999876554

>d2go7a1 c.108.1.6 (A:3-206) Hypothetical protein SP2064 {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Hypothetical protein SP2064
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=87.79  E-value=0.079  Score=42.71  Aligned_cols=29  Identities=17%  Similarity=0.243  Sum_probs=24.3

Q ss_pred             eeEeCccHHHHHHHHHhc-cEEEEEccccc
Q 042646          527 AVFKRPCCDEFLSFCFER-FNVGVWSRGSR  555 (560)
Q Consensus       527 yVyKRPhLDEFLdfVsE~-FEVVVWTSS~~  555 (560)
                      .+...|++.++|+++.+. |.++|-|++..
T Consensus        80 ~~~~~pgv~~~L~~L~~~g~~~~v~Sn~~~  109 (204)
T d2go7a1          80 QVVLMPGAREVLAWADESGIQQFIYTHKGN  109 (204)
T ss_dssp             GCEECTTHHHHHHHHHHTTCEEEEECSSCT
T ss_pred             cCcccchHHhhhhcccccccchhhhcccch
Confidence            456779999999999877 99999997543

>d1zrna_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., strain YL [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: HAD-related
domain: L-2-Haloacid dehalogenase, HAD
species: Pseudomonas sp., strain YL [TaxId: 306]

Probab=87.40  E-value=0.082  Score=42.55  Aligned_cols=32  Identities=16%  Similarity=0.082  Sum_probs=25.1

Q ss_pred             eeEeCccHHHHHHHHHhc-cEEEEEcccccccc
Q 042646          527 AVFKRPCCDEFLSFCFER-FNVGVWSRGSRKIW  558 (560)
Q Consensus       527 yVyKRPhLDEFLdfVsE~-FEVVVWTSS~~kYV  558 (560)
                      .+...|.+.++|+.+.+. +-++|.|.....++
T Consensus        91 ~~~~~~~~~~~l~~l~~~~~~~~i~tn~~~~~~  123 (220)
T d1zrna_          91 RLAPFSEVPDSLRELKRRGLKLAILSNGSPQSI  123 (220)
T ss_dssp             GCEECTTHHHHHHHHHHTTCEEEEEESSCHHHH
T ss_pred             cccccchhHHHHHHHHhcCCeEEeecchHHHHH
Confidence            466789999999999755 78999988765543

>d1u02a_ c.108.1.15 (A:) Trehalose-6-phosphate phosphatase related protein {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Trehalose-phosphatase
domain: Trehalose-6-phosphate phosphatase related protein
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=86.23  E-value=0.12  Score=41.24  Aligned_cols=12  Identities=50%  Similarity=0.827  Sum_probs=11.2

Q ss_pred             EEEEecCccccc
Q 042646          497 LLVLDLNGLLVD  508 (560)
Q Consensus       497 LLVLDLDETLVH  508 (560)
                      ||+|||||||+.
T Consensus         2 Li~~DlDGTL~~   13 (229)
T d1u02a_           2 LIFLDYDGTLVP   13 (229)
T ss_dssp             EEEEECBTTTBC
T ss_pred             EEEEEecCCCCC
Confidence            799999999995

>d1o08a_ c.108.1.6 (A:) beta-Phosphoglucomutase {Lactococcus lactis [TaxId: 1358]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: beta-Phosphoglucomutase
species: Lactococcus lactis [TaxId: 1358]

Probab=85.82  E-value=0.11  Score=42.08  Aligned_cols=27  Identities=11%  Similarity=-0.030  Sum_probs=20.6

Q ss_pred             eEeCccHHHHHHHHHhc-cEEEEEcccc
Q 042646          528 VFKRPCCDEFLSFCFER-FNVGVWSRGS  554 (560)
Q Consensus       528 VyKRPhLDEFLdfVsE~-FEVVVWTSS~  554 (560)
                      +...|++.++|+++.+. +.++|-|++.
T Consensus        90 ~~~~~g~~~~l~~l~~~~~~i~i~s~~~  117 (221)
T d1o08a_          90 ADVYPGILQLLKDLRSNKIKIALASASK  117 (221)
T ss_dssp             GGBCTTHHHHHHHHHHTTCEEEECCSCT
T ss_pred             ccccCCceeccccccccccceEEEeecc
Confidence            44678999999999866 6777777653

>d1nf2a_ c.108.1.10 (A:) Hypothetical protein TM0651 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Hypothetical protein TM0651
species: Thermotoga maritima [TaxId: 2336]

Probab=85.74  E-value=0.14  Score=43.33  Aligned_cols=16  Identities=31%  Similarity=0.603  Sum_probs=13.7

Q ss_pred             eEEEEecCcccccccC
Q 042646          496 KLLVLDLNGLLVDIVA  511 (560)
Q Consensus       496 KLLVLDLDETLVHSSs  511 (560)
                      ||+++||||||++...
T Consensus         3 Kli~~DlDGTL~~~~~   18 (267)
T d1nf2a_           3 RVFVFDLDGTLLNDNL   18 (267)
T ss_dssp             CEEEEECCCCCSCTTS
T ss_pred             EEEEEeCCccccCCcC
Confidence            6999999999998543

>d1l6ra_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Phosphoglycolate phosphatase, PGPase
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=84.43  E-value=0.1  Score=43.07  Aligned_cols=16  Identities=31%  Similarity=0.459  Sum_probs=13.9

Q ss_pred             CeEEEEecCccccccc
Q 042646          495 KKLLVLDLNGLLVDIV  510 (560)
Q Consensus       495 KKLLVLDLDETLVHSS  510 (560)
                      -|++++||||||++..
T Consensus         3 iKli~~D~DGTL~~~~   18 (225)
T d1l6ra_           3 IRLAAIDVDGNLTDRD   18 (225)
T ss_dssp             CCEEEEEHHHHSBCTT
T ss_pred             eEEEEEecCCCCcCCC
Confidence            4799999999999754

>d1rlma_ c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Sugar phosphatase SupH (YbiV)
species: Escherichia coli [TaxId: 562]

Probab=84.43  E-value=0.16  Score=42.44  Aligned_cols=15  Identities=27%  Similarity=0.605  Sum_probs=13.0

Q ss_pred             eEEEEecCccccccc
Q 042646          496 KLLVLDLNGLLVDIV  510 (560)
Q Consensus       496 KLLVLDLDETLVHSS  510 (560)
                      ||+++||||||+...
T Consensus         3 Kli~~DlDGTLl~~~   17 (269)
T d1rlma_           3 KVIVTDMDGTFLNDA   17 (269)
T ss_dssp             CEEEECCCCCCSCTT
T ss_pred             EEEEEeCCccCcCCC
Confidence            699999999999753

>d1cr6a1 c.108.1.2 (A:4-225) Epoxide hydrolase, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: YihX-like
domain: Epoxide hydrolase, N-terminal domain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=84.11  E-value=0.14  Score=40.95  Aligned_cols=26  Identities=4%  Similarity=-0.178  Sum_probs=21.0

Q ss_pred             eEeCccHHHHHHHHHhc-cEEEEEccc
Q 042646          528 VFKRPCCDEFLSFCFER-FNVGVWSRG  553 (560)
Q Consensus       528 VyKRPhLDEFLdfVsE~-FEVVVWTSS  553 (560)
                      +..+|++.++|.++.++ +.++|-|..
T Consensus        96 ~~~~~~~~~~L~~L~~~~~~~~i~s~~  122 (222)
T d1cr6a1          96 RSINRPMLQAAIALKKKGFTTCIVTNN  122 (222)
T ss_dssp             CEECHHHHHHHHHHHHTTCEEEEEECC
T ss_pred             CCCCccHHHHHHHHHhcCCceEEeecc
Confidence            46789999999999887 777777754

>d2fi1a1 c.108.1.3 (A:4-190) Putative hydrolase SP0805 {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Phosphonoacetaldehyde hydrolase-like
domain: Putative hydrolase SP0805
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=84.01  E-value=0.16  Score=40.94  Aligned_cols=29  Identities=7%  Similarity=-0.187  Sum_probs=23.6

Q ss_pred             eeEeCccHHHHHHHHHhc-cEEEEEccccc
Q 042646          527 AVFKRPCCDEFLSFCFER-FNVGVWSRGSR  555 (560)
Q Consensus       527 yVyKRPhLDEFLdfVsE~-FEVVVWTSS~~  555 (560)
                      .....|++.++|+++.+. +-++|-|++.+
T Consensus        77 ~~~~~~gv~~~l~~l~~~g~~~~i~Sn~~~  106 (187)
T d2fi1a1          77 HPILFEGVSDLLEDISNQGGRHFLVSHRND  106 (187)
T ss_dssp             SCCBCTTHHHHHHHHHHTTCEEEEECSSCT
T ss_pred             cCcccchhHHHHHHHHhhhccccccccCcc
Confidence            345669999999999877 99999997654

>d1zd3a1 c.108.1.2 (A:2-224) Epoxide hydrolase, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: YihX-like
domain: Epoxide hydrolase, N-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=83.71  E-value=0.16  Score=39.83  Aligned_cols=31  Identities=6%  Similarity=-0.152  Sum_probs=23.7

Q ss_pred             eeEeCccHHHHHHHHHhc-cEEEEEccccccc
Q 042646          527 AVFKRPCCDEFLSFCFER-FNVGVWSRGSRKI  557 (560)
Q Consensus       527 yVyKRPhLDEFLdfVsE~-FEVVVWTSS~~kY  557 (560)
                      .+..+|++.++|..+.+. +.++|-|.+...+
T Consensus        97 ~~~~~~~~~~~l~~L~~~~~~~~i~Tn~~~~~  128 (225)
T d1zd3a1          97 ARKINRPMLQAALMLRKKGFTTAILTNTWLDD  128 (225)
T ss_dssp             HCEECHHHHHHHHHHHHTTCEEEEEECCCCCC
T ss_pred             cCCCCccHHHHHHHHHhccCccccccccchhh
Confidence            356789999999999876 7888888765443

>d1vjra_ c.108.1.14 (A:) Hypothetical protein TM1742 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: NagD-like
domain: Hypothetical protein TM1742
species: Thermotoga maritima [TaxId: 2336]

Probab=83.13  E-value=0.17  Score=42.77  Aligned_cols=15  Identities=27%  Similarity=0.452  Sum_probs=13.2

Q ss_pred             CeEEEEecCcccccc
Q 042646          495 KKLLVLDLNGLLVDI  509 (560)
Q Consensus       495 KKLLVLDLDETLVHS  509 (560)
                      =|+++|||||||++.
T Consensus         7 ik~vlFDlDGTL~~~   21 (261)
T d1vjra_           7 IELFILDMDGTFYLD   21 (261)
T ss_dssp             CCEEEECCBTTTEET
T ss_pred             CCEEEEeCCCeeEEC
Confidence            479999999999874

>d1zs9a1 c.108.1.22 (A:4-256) E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Enolase-phosphatase E1
domain: E-1 enzyme
species: Human(Homo sapiens) [TaxId: 9606]

Probab=83.12  E-value=0.14  Score=40.76  Aligned_cols=30  Identities=17%  Similarity=-0.038  Sum_probs=24.8

Q ss_pred             eEeCccHHHHHHHHHhc-cEEEEEccccccc
Q 042646          528 VFKRPCCDEFLSFCFER-FNVGVWSRGSRKI  557 (560)
Q Consensus       528 VyKRPhLDEFLdfVsE~-FEVVVWTSS~~kY  557 (560)
                      ...+|++.++|..+.+. |.++|.|.+....
T Consensus       126 ~~~~pg~~e~l~~L~~~g~~l~i~Tn~~~~~  156 (253)
T d1zs9a1         126 AEFFADVVPAVRKWREAGMKVYIYSSGSVEA  156 (253)
T ss_dssp             BCCCTTHHHHHHHHHHTTCEEEEECSSCHHH
T ss_pred             cccCCCHHHHHHHHhhccCceeecCCCcHHH
Confidence            34679999999999776 9999999986543

>d1te2a_ c.108.1.6 (A:) Phosphatase YniC {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Phosphatase YniC
species: Escherichia coli [TaxId: 562]

Probab=82.51  E-value=0.2  Score=40.38  Aligned_cols=31  Identities=23%  Similarity=0.265  Sum_probs=25.5

Q ss_pred             eEeCccHHHHHHHHHhc-cEEEEEcccccccc
Q 042646          528 VFKRPCCDEFLSFCFER-FNVGVWSRGSRKIW  558 (560)
Q Consensus       528 VyKRPhLDEFLdfVsE~-FEVVVWTSS~~kYV  558 (560)
                      +...|++.++|+++.+. |.++|-|++...++
T Consensus        87 ~~~~pg~~~~l~~L~~~g~~~~i~T~~~~~~~  118 (218)
T d1te2a_          87 RPLLPGVREAVALCKEQGLLVGLASASPLHML  118 (218)
T ss_dssp             CCBCTTHHHHHHHHHHTTCEEEEEESSCHHHH
T ss_pred             ccccchHHHHHHHhhhcccccccccccccccc
Confidence            34579999999999876 89999998876554

>d2rbka1 c.108.1.10 (A:2-261) Sugar-phosphate phosphatase BT4131 {Bacteroides thetaiotaomicron [TaxId: 818]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Sugar-phosphate phosphatase BT4131
species: Bacteroides thetaiotaomicron [TaxId: 818]

Probab=82.24  E-value=0.2  Score=42.17  Aligned_cols=14  Identities=43%  Similarity=0.762  Sum_probs=12.4

Q ss_pred             eEEEEecCcccccc
Q 042646          496 KLLVLDLNGLLVDI  509 (560)
Q Consensus       496 KLLVLDLDETLVHS  509 (560)
                      |+|++||||||++.
T Consensus         2 k~if~DlDGTL~~~   15 (260)
T d2rbka1           2 KALFFDIDGTLVSF   15 (260)
T ss_dssp             CEEEECSBTTTBCT
T ss_pred             eEEEEECCCCCcCC
Confidence            78999999999953

>d1wvia_ c.108.1.14 (A:) Putative phosphatase SMU.1415c {Streptococcus mutans [TaxId: 1309]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: NagD-like
domain: Putative phosphatase SMU.1415c
species: Streptococcus mutans [TaxId: 1309]

Probab=82.10  E-value=0.22  Score=42.45  Aligned_cols=14  Identities=29%  Similarity=0.413  Sum_probs=12.6

Q ss_pred             eEEEEecCcccccc
Q 042646          496 KLLVLDLNGLLVDI  509 (560)
Q Consensus       496 KLLVLDLDETLVHS  509 (560)
                      |.++|||||||+|.
T Consensus         3 k~vlFDlDGTL~~~   16 (253)
T d1wvia_           3 KGYLIDLDGTIYKG   16 (253)
T ss_dssp             CEEEEECBTTTEET
T ss_pred             CEEEEcCcCceEEC
Confidence            68999999999875

>d2g80a1 c.108.1.22 (A:17-241) Protein UTR4 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Enolase-phosphatase E1
domain: Protein UTR4
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=81.05  E-value=0.24  Score=39.23  Aligned_cols=15  Identities=27%  Similarity=0.474  Sum_probs=12.8

Q ss_pred             CeEEEEecCcccccc
Q 042646          495 KKLLVLDLNGLLVDI  509 (560)
Q Consensus       495 KKLLVLDLDETLVHS  509 (560)
                      =++++|||||||+++
T Consensus         3 ~~~~lfD~dGTl~d~   17 (225)
T d2g80a1           3 YSTYLLDIEGTVCPI   17 (225)
T ss_dssp             CSEEEECCBTTTBCT
T ss_pred             CCEEEEcCCCCCccc
Confidence            368999999999875

>d2c4na1 c.108.1.14 (A:1-250) NagD {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: NagD-like
domain: NagD
species: Escherichia coli [TaxId: 562]

Probab=80.75  E-value=0.26  Score=41.88  Aligned_cols=15  Identities=27%  Similarity=0.485  Sum_probs=13.0

Q ss_pred             CeEEEEecCcccccc
Q 042646          495 KKLLVLDLNGLLVDI  509 (560)
Q Consensus       495 KKLLVLDLDETLVHS  509 (560)
                      =|.+++||||||++.
T Consensus         3 ik~VifDlDGTL~~~   17 (250)
T d2c4na1           3 IKNVICDIDGVLMHD   17 (250)
T ss_dssp             CCEEEEECBTTTEET
T ss_pred             CCEEEEECCCeeEEC
Confidence            478999999999864

>d2gfha1 c.108.1.6 (A:1-247) N-acylneuraminate-9-phosphatase NANP {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: N-acylneuraminate-9-phosphatase NANP
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=80.51  E-value=0.24  Score=40.67  Aligned_cols=30  Identities=10%  Similarity=0.113  Sum_probs=24.9

Q ss_pred             eEeCccHHHHHHHHHhccEEEEEccccccc
Q 042646          528 VFKRPCCDEFLSFCFERFNVGVWSRGSRKI  557 (560)
Q Consensus       528 VyKRPhLDEFLdfVsE~FEVVVWTSS~~kY  557 (560)
                      +...|++.++|+++.+.|.++|-|.+...+
T Consensus       108 ~~~~~~~~~~L~~L~~~~~l~i~Tn~~~~~  137 (247)
T d2gfha1         108 MILADDVKAMLTELRKEVRLLLLTNGDRQT  137 (247)
T ss_dssp             CCCCHHHHHHHHHHHTTSEEEEEECSCHHH
T ss_pred             CccCccHHHHHHHhhcccceEEeecccchh
Confidence            345689999999999999999999876543