Citrus Sinensis ID: 042664

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210---
SSAQELEKLRSVLSSWGCFQAINHGIEPAFLDKVKAVGRQFFALPAEEKNKYARDIAIGFEGYANHIINGEEQAFDWIDRLYLITGPEDRKQLKFWPENPESFRKILEEYNAKMVKLNEFLLKAIGLALNLEENCFLDMYGEEATMIAVYNLYPPCPRPDLAIGLKPHADGTAFTYLLQDKEVEGLQVLKDNQWYRVPVIPEAFVINVGDQIE
cHHHHHHHHHHHHHHccEEEEEcccccHHHHHHHHHHHHHHccccHHHHHHHHHHccccEEEEcccccccccccccccEEEEcccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHcccccEEcEEcccccccccccccccccccccccEEEEEEccccccEEEEEccEEEEcccccccEEEEcccccc
ccHHHHHHHHHHHHHccEEEEEcccccHHHHHHHHHHHHHHHcccHHHHHHHEcEHHHcccEcccHHEEcccccccHHHHEEEEEcccccccccHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHcccccEEEEEEccccccccccEcccccccccccEEEEEcccccccEEEEEcccEEEccccccEEEEEcccccc
SSAQELEKLRSVLSSWgcfqainhgiepafLDKVKAVGRQffalpaeeknKYARDIAIGFEGYANHIINGEEQAFDWIDRLYlitgpedrkqlkfwpenpESFRKILEEYNAKMVKLNEFLLKAIGLALNLEENCFLDMYGEEATMIAVYnlyppcprpdlaiglkphadgtaFTYLLQDKEveglqvlkdnqwyrvpvipeafvinvgdqie
SSAQELEKLRSVLSSWGCFQAINHGIEPAFLDKVKAVGRQFFalpaeeknkYARDIAIGFEGYANHIINGEEQAFDWIDRLYLITGpedrkqlkfwpeNPESFRKILEEYNAKMVKLNEFLLKAIGLALNLEENCFLDMYGEEATMIAVYNLYPPCPRPDLAIGLKPHADGTAFTYLLQDKEVEGLQVLKDNQWYRVPVIPEAFVINVGDQIE
SSAQELEKLRSVLSSWGCFQAINHGIEPAFLDKVKAVGRQFFALPAEEKNKYARDIAIGFEGYANHIINGEEQAFDWIDRLYLITGPEDRKQLKFWPENPESFRKILEEYNAKMVKLNEFLLKAIGLALNLEENCFLDMYGEEATMIAVYNLYPPCPRPDLAIGLKPHADGTAFTYLLQDKEVEGLQVLKDNQWYRVPVIPEAFVINVGDQIE
**********SVLSSWGCFQAINHGIEPAFLDKVKAVGRQFFALPAEEKNKYARDIAIGFEGYANHIINGEEQAFDWIDRLYLITGPEDRKQLKFWPENPESFRKILEEYNAKMVKLNEFLLKAIGLALNLEENCFLDMYGEEATMIAVYNLYPPCPRPDLAIGLKPHADGTAFTYLLQDKEVEGLQVLKDNQWYRVPVIPEAFVINVG****
**AQELEKLRSVLSSWGCFQAINHGIEPAFLDKVKAVGRQFFALPAEEKNKYARDI***FEGYANHIINGEEQAFDWIDRLYLITGPEDRKQLKFWPENPESFRKILEEYNAKMVKLNEFLLKAIGLALNLEENCFLDMYGEEATMIAVYNLYPPCPRPDLAIGLKPHADGTAFTYLLQDKEVEGLQVLKDNQWYRVPVIPEAFVINVGDQIE
*********RSVLSSWGCFQAINHGIEPAFLDKVKAVGRQFFALPAEEKNKYARDIAIGFEGYANHIINGEEQAFDWIDRLYLITGPEDRKQLKFWPENPESFRKILEEYNAKMVKLNEFLLKAIGLALNLEENCFLDMYGEEATMIAVYNLYPPCPRPDLAIGLKPHADGTAFTYLLQDKEVEGLQVLKDNQWYRVPVIPEAFVINVGDQIE
*SAQELEKLRSVLSSWGCFQAINHGIEPAFLDKVKAVGRQFFALPAEEKNKYARDIAIGFEGYANHIINGEEQAFDWIDRLYLITGPEDRKQLKFWPENPESFRKILEEYNAKMVKLNEFLLKAIGLALNLEENCFLDMYGEEATMIAVYNLYPPCPRPDLAIGLKPHADGTAFTYLLQDKEVEGLQVLKDNQWYRVPVIPEAFVINVGD***
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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SSAQELEKLRSVLSSWGCFQAINHGIEPAFLDKVKAVGRQFFALPAEEKNKYARDIAIGFEGYANHIINGEEQAFDWIDRLYLITGPEDRKQLKFWPENPESFRKILEEYNAKMVKLNEFLLKAIGLALNLEENCFLDMYGEEATMIAVYNLYPPCPRPDLAIGLKPHADGTAFTYLLQDKEVEGLQVLKDNQWYRVPVIPEAFVINVGDQIE
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query213 2.2.26 [Sep-21-2011]
D4N502360 Codeine O-demethylase OS= N/A no 0.976 0.577 0.382 3e-39
Q39224358 Protein SRG1 OS=Arabidops no no 0.957 0.569 0.383 2e-37
Q96330336 Flavonol synthase/flavano no no 0.920 0.583 0.386 2e-36
Q9ZWQ9335 Flavonol synthase/flavano N/A no 0.924 0.588 0.405 2e-36
D4N501364 Probable 2-oxoglutarate/F N/A no 0.953 0.557 0.370 4e-36
Q9M547334 Flavonol synthase/flavano N/A no 0.920 0.586 0.395 7e-36
Q7XZQ6337 Flavonol synthase/flavano N/A no 0.924 0.584 0.395 2e-35
A2A1A0352 S-norcoclaurine synthase N/A no 0.962 0.582 0.370 2e-35
P51091357 Leucoanthocyanidin dioxyg N/A no 0.967 0.577 0.347 5e-35
Q07512348 Flavonol synthase/flavano N/A no 0.924 0.566 0.383 8e-35
>sp|D4N502|DIOX3_PAPSO Codeine O-demethylase OS=Papaver somniferum GN=CODM PE=1 SV=1 Back     alignment and function desciption
 Score =  161 bits (408), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 80/209 (38%), Positives = 120/209 (57%), Gaps = 1/209 (0%)

Query: 5   ELEKLRSVLSSWGCFQAINHGIEPAFLDKVKAVGRQFFALPAEEKNKYARDIAIGFEGYA 64
           EL+KL S    WG FQ +NHG++   +D +K+  + FF LP  EK KY +     FEG+ 
Sbjct: 73  ELDKLHSACKEWGFFQLVNHGVDALLMDNIKSEIKGFFNLPMNEKTKYGQQDG-DFEGFG 131

Query: 65  NHIINGEEQAFDWIDRLYLITGPEDRKQLKFWPENPESFRKILEEYNAKMVKLNEFLLKA 124
              I  E+Q  DW +   +++ P   ++   +PE P  FR+ LE Y +KM KL+  + + 
Sbjct: 132 QPYIESEDQRLDWTEVFSMLSLPLHLRKPHLFPELPLPFRETLESYLSKMKKLSTVVFEM 191

Query: 125 IGLALNLEENCFLDMYGEEATMIAVYNLYPPCPRPDLAIGLKPHADGTAFTYLLQDKEVE 184
           +  +L L E   +    E+       N YPPCPRP+L +GL  H+D +  T LLQ  EVE
Sbjct: 192 LEKSLQLVEIKGMTDLFEDGLQTMRMNYYPPCPRPELVLGLTSHSDFSGLTILLQLNEVE 251

Query: 185 GLQVLKDNQWYRVPVIPEAFVINVGDQIE 213
           GLQ+ K+ +W  +  +P+AF++NVGD +E
Sbjct: 252 GLQIRKEERWISIKPLPDAFIVNVGDILE 280
Non-heme dioxygenase catalyzing the conversion of codeine to morphine. Catalyzes also, with lower efficiency, the 3-O-demethylation of thebaine to oripavine and of (S)-scoulerine to 3-O-demethylscoulerine. No activity with (S)-reticuline, salutaridine, papaverine, (S)-corytuberine, oripavine, pavine or noscapine.
Papaver somniferum (taxid: 3469)
EC: 1EC: .EC: 1EC: 4EC: .EC: 1EC: 1EC: .EC: 3EC: 2
>sp|Q39224|SRG1_ARATH Protein SRG1 OS=Arabidopsis thaliana GN=SRG1 PE=2 SV=1 Back     alignment and function description
>sp|Q96330|FLS1_ARATH Flavonol synthase/flavanone 3-hydroxylase OS=Arabidopsis thaliana GN=FLS1 PE=1 SV=1 Back     alignment and function description
>sp|Q9ZWQ9|FLS_CITUN Flavonol synthase/flavanone 3-hydroxylase OS=Citrus unshiu GN=FLS PE=1 SV=1 Back     alignment and function description
>sp|D4N501|DIOX2_PAPSO Probable 2-oxoglutarate/Fe(II)-dependent dioxygenase OS=Papaver somniferum GN=DIOX2 PE=2 SV=1 Back     alignment and function description
>sp|Q9M547|FLS_EUSER Flavonol synthase/flavanone 3-hydroxylase OS=Eustoma exaltatum subsp. russellianum GN=FLS PE=2 SV=1 Back     alignment and function description
>sp|Q7XZQ6|FLS_PETCR Flavonol synthase/flavanone 3-hydroxylase OS=Petroselinum crispum GN=FLS PE=1 SV=1 Back     alignment and function description
>sp|A2A1A0|NCS1_COPJA S-norcoclaurine synthase 1 OS=Coptis japonica GN=NCS1 PE=1 SV=1 Back     alignment and function description
>sp|P51091|LDOX_MALDO Leucoanthocyanidin dioxygenase OS=Malus domestica GN=ANS PE=2 SV=1 Back     alignment and function description
>sp|Q07512|FLS_PETHY Flavonol synthase/flavanone 3-hydroxylase OS=Petunia hybrida GN=FL PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query213
224120306 347 predicted protein [Populus trichocarpa] 0.995 0.610 0.586 3e-74
296084534 381 unnamed protein product [Vitis vinifera] 0.976 0.545 0.607 9e-73
225446211 377 PREDICTED: protein SRG1 [Vitis vinifera] 0.976 0.551 0.607 9e-73
224142523 353 predicted protein [Populus trichocarpa] 0.995 0.600 0.607 4e-72
359806096 351 uncharacterized protein LOC100799195 [Gl 0.995 0.603 0.591 6e-71
2688828 348 ethylene-forming-enzyme-like dioxygenase 0.990 0.606 0.537 5e-68
356508202 356 PREDICTED: codeine O-demethylase-like [G 0.995 0.595 0.563 1e-67
15239524 349 oxidoreductase, 2OG-Fe(II) oxygenase fam 0.981 0.598 0.547 2e-67
357467431 354 S-norcoclaurine synthase [Medicago trunc 0.995 0.598 0.563 5e-67
388509660 381 unknown [Medicago truncatula] 0.995 0.556 0.563 7e-67
>gi|224120306|ref|XP_002331015.1| predicted protein [Populus trichocarpa] gi|222872945|gb|EEF10076.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
 Score =  283 bits (725), Expect = 3e-74,   Method: Compositional matrix adjust.
 Identities = 125/213 (58%), Positives = 162/213 (76%), Gaps = 1/213 (0%)

Query: 1   SSAQELEKLRSVLSSWGCFQAINHGIEPAFLDKVKAVGRQFFALPAEEKNKYARDIAIGF 60
           +SAQELEK     SSWGCFQ +NHG+  +FLDK++ V ++FFAL  E+K KY+R+ A   
Sbjct: 58  TSAQELEKFHLAASSWGCFQVVNHGMTSSFLDKIRDVSKRFFALSMEDKQKYSRE-ADSI 116

Query: 61  EGYANHIINGEEQAFDWIDRLYLITGPEDRKQLKFWPENPESFRKILEEYNAKMVKLNEF 120
           EGY N +I  + Q  DW DRLYL   PED++++KFWPENP+ FR+ L EY  K+ ++NE 
Sbjct: 117 EGYGNDMILSDHQTIDWSDRLYLTISPEDQRKIKFWPENPKDFRETLNEYTMKLQEINEI 176

Query: 121 LLKAIGLALNLEENCFLDMYGEEATMIAVYNLYPPCPRPDLAIGLKPHADGTAFTYLLQD 180
           LL+A+ ++LNLEE+ FLD YGE   + A +N YPPCPRPD  +G+KPHAD +A T+LLQD
Sbjct: 177 LLRAMAMSLNLEESSFLDQYGERPLVAARFNFYPPCPRPDRILGVKPHADASAITFLLQD 236

Query: 181 KEVEGLQVLKDNQWYRVPVIPEAFVINVGDQIE 213
           KEVEGLQ LKDNQW+RVP+IP A +INVGDQ+E
Sbjct: 237 KEVEGLQFLKDNQWFRVPIIPHALLINVGDQVE 269

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|296084534|emb|CBI25555.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|225446211|ref|XP_002263317.1| PREDICTED: protein SRG1 [Vitis vinifera] Back     alignment and taxonomy information
>gi|224142523|ref|XP_002324605.1| predicted protein [Populus trichocarpa] gi|222866039|gb|EEF03170.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|359806096|ref|NP_001241442.1| uncharacterized protein LOC100799195 [Glycine max] gi|255640143|gb|ACU20362.1| unknown [Glycine max] Back     alignment and taxonomy information
>gi|2688828|gb|AAB88878.1| ethylene-forming-enzyme-like dioxygenase [Prunus armeniaca] Back     alignment and taxonomy information
>gi|356508202|ref|XP_003522848.1| PREDICTED: codeine O-demethylase-like [Glycine max] Back     alignment and taxonomy information
>gi|15239524|ref|NP_200211.1| oxidoreductase, 2OG-Fe(II) oxygenase family protein [Arabidopsis thaliana] gi|10177262|dbj|BAB10730.1| ethylene-forming-enzyme-like dioxygenase [Arabidopsis thaliana] gi|67633882|gb|AAY78865.1| oxidoreductase [Arabidopsis thaliana] gi|332009054|gb|AED96437.1| oxidoreductase, 2OG-Fe(II) oxygenase family protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|357467431|ref|XP_003604000.1| S-norcoclaurine synthase [Medicago truncatula] gi|355493048|gb|AES74251.1| S-norcoclaurine synthase [Medicago truncatula] Back     alignment and taxonomy information
>gi|388509660|gb|AFK42896.1| unknown [Medicago truncatula] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query213
TAIR|locus:2154744349 AT5G54000 [Arabidopsis thalian 0.981 0.598 0.547 8.5e-65
TAIR|locus:2010242348 AT1G49390 [Arabidopsis thalian 0.981 0.600 0.547 8.8e-63
TAIR|locus:2149907349 AT5G20550 [Arabidopsis thalian 0.981 0.598 0.559 4.8e-62
TAIR|locus:2149214348 AT5G20400 [Arabidopsis thalian 0.981 0.600 0.557 7.9e-62
TAIR|locus:2089428364 LBO1 "LATERAL BRANCHING OXIDOR 0.971 0.568 0.419 1.6e-40
TAIR|locus:2020422361 AT1G17010 [Arabidopsis thalian 0.976 0.576 0.377 2.1e-38
TAIR|locus:2122669356 AT4G25300 [Arabidopsis thalian 0.990 0.592 0.397 2.4e-37
TAIR|locus:2020407358 SRG1 "senescence-related gene 0.971 0.578 0.374 6.3e-37
TAIR|locus:2169697371 AT5G05600 [Arabidopsis thalian 0.971 0.557 0.354 1e-36
TAIR|locus:2159542336 FLS1 "flavonol synthase 1" [Ar 0.920 0.583 0.391 4.4e-36
TAIR|locus:2154744 AT5G54000 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 660 (237.4 bits), Expect = 8.5e-65, P = 8.5e-65
 Identities = 115/210 (54%), Positives = 153/210 (72%)

Query:     4 QELEKLRSVLSSWGCFQAINHGIEPAFLDKVKAVGRQFFALPAEEKNKYARDIAIGFEGY 63
             +EL KL S +S+WG  Q +NHGI  A LDK+  + +QFF LP +EK KYAR+I+  F+G+
Sbjct:    63 EELSKLHSAISTWGVVQVMNHGISEALLDKIHELTKQFFVLPTKEKQKYAREIS-SFQGF 121

Query:    64 ANHIINGEEQAFDWIDRLYLITGPEDRKQLKFWPENPESFRKILEEYNAKMVKLNEFLLK 123
              N +I  ++Q  DW+DRLYLIT PED++QLKFWPENP  FR+ L EY  K   + E   K
Sbjct:   122 GNDMILSDDQVLDWVDRLYLITYPEDQRQLKFWPENPSGFRETLHEYTMKQQLVVEKFFK 181

Query:   124 AIGLALNLEENCFLDMYGEEATMIAVYNLYPPCPRPDLAIGLKPHADGTAFTYLLQDKEV 183
             A+  +L LE+NCFL+M+GE AT+   +N+YPPCPRPD  +GLKPH+DG+AFT +L DK V
Sbjct:   182 ALARSLELEDNCFLEMHGENATLETRFNIYPPCPRPDKVLGLKPHSDGSAFTLILPDKNV 241

Query:   184 EGLQVLKDNQWYRVPVIPEAFVINVGDQIE 213
             EGLQ LKD +WY+  ++P   +INVGD +E
Sbjct:   242 EGLQFLKDGKWYKASILPHTILINVGDTME 271
GO:0005737 "cytoplasm" evidence=ISM
GO:0016491 "oxidoreductase activity" evidence=IEA
GO:0016706 "oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors" evidence=IEA;ISS
GO:0055114 "oxidation-reduction process" evidence=IEA
TAIR|locus:2010242 AT1G49390 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2149907 AT5G20550 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2149214 AT5G20400 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2089428 LBO1 "LATERAL BRANCHING OXIDOREDUCTASE 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2020422 AT1G17010 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2122669 AT4G25300 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2020407 SRG1 "senescence-related gene 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2169697 AT5G05600 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2159542 FLS1 "flavonol synthase 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer1.14.11LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
fgenesh4_pm.C_scaffold_152000026
hypothetical protein (347 aa)
(Populus trichocarpa)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query213
PLN00417348 PLN00417, PLN00417, oxidoreductase, 2OG-Fe(II) oxy 1e-95
PLN02758361 PLN02758, PLN02758, oxidoreductase, 2OG-Fe(II) oxy 4e-61
PLN02393362 PLN02393, PLN02393, leucoanthocyanidin dioxygenase 8e-55
PLN02216357 PLN02216, PLN02216, protein SRG1 1e-53
PLN02704335 PLN02704, PLN02704, flavonol synthase 1e-52
PLN03178360 PLN03178, PLN03178, leucoanthocyanidin dioxygenase 3e-50
PLN02639337 PLN02639, PLN02639, oxidoreductase, 2OG-Fe(II) oxy 3e-47
PLN02947374 PLN02947, PLN02947, oxidoreductase 5e-39
PLN02912348 PLN02912, PLN02912, oxidoreductase, 2OG-Fe(II) oxy 6e-39
PLN02997325 PLN02997, PLN02997, flavonol synthase 4e-36
COG3491322 COG3491, PcbC, Isopenicillin N synthase and relate 1e-35
PLN03001262 PLN03001, PLN03001, oxidoreductase, 2OG-Fe(II) oxy 1e-34
PLN02515358 PLN02515, PLN02515, naringenin,2-oxoglutarate 3-di 2e-34
PLN02750345 PLN02750, PLN02750, oxidoreductase, 2OG-Fe(II) oxy 3e-34
PLN02254358 PLN02254, PLN02254, gibberellin 3-beta-dioxygenase 1e-33
PLN02904357 PLN02904, PLN02904, oxidoreductase 6e-30
PLN02299321 PLN02299, PLN02299, 1-aminocyclopropane-1-carboxyl 3e-29
PLN02984341 PLN02984, PLN02984, oxidoreductase, 2OG-Fe(II) oxy 2e-26
PLN02276361 PLN02276, PLN02276, gibberellin 20-oxidase 1e-25
pfam14226113 pfam14226, DIOX_N, non-haem dioxygenase in morphin 1e-22
PLN02403303 PLN02403, PLN02403, aminocyclopropanecarboxylate o 1e-21
PLN02485329 PLN02485, PLN02485, oxidoreductase 1e-20
pfam0317196 pfam03171, 2OG-FeII_Oxy, 2OG-Fe(II) oxygenase supe 1e-15
PTZ00273320 PTZ00273, PTZ00273, oxidase reductase; Provisional 2e-15
PLN02365300 PLN02365, PLN02365, 2-oxoglutarate-dependent dioxy 1e-14
PLN03002332 PLN03002, PLN03002, oxidoreductase, 2OG-Fe(II) oxy 3e-13
PLN02156335 PLN02156, PLN02156, gibberellin 2-beta-dioxygenase 5e-13
PLN03176120 PLN03176, PLN03176, flavanone-3-hydroxylase; Provi 6e-06
>gnl|CDD|177810 PLN00417, PLN00417, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information 
 Score =  282 bits (722), Expect = 1e-95
 Identities = 123/210 (58%), Positives = 154/210 (73%), Gaps = 1/210 (0%)

Query: 4   QELEKLRSVLSSWGCFQAINHGIEPAFLDKVKAVGRQFFALPAEEKNKYARDIAIGFEGY 63
           +EL KL S LS+WG  Q +NHGI  AFLDK+  + +QFFALP EEK K AR+I    +GY
Sbjct: 62  EELSKLHSALSTWGVVQVMNHGITEAFLDKIYKLTKQFFALPTEEKQKCAREIG-SIQGY 120

Query: 64  ANHIINGEEQAFDWIDRLYLITGPEDRKQLKFWPENPESFRKILEEYNAKMVKLNEFLLK 123
            N +I  ++Q  DWIDRLYL T PED++QLKFWP+ P  FR+ L EY  K   + E   K
Sbjct: 121 GNDMILSDDQVLDWIDRLYLTTYPEDQRQLKFWPQVPVGFRETLHEYTMKQRLVIEKFFK 180

Query: 124 AIGLALNLEENCFLDMYGEEATMIAVYNLYPPCPRPDLAIGLKPHADGTAFTYLLQDKEV 183
           A+  +L LEENCFL+MYGE ATM   +N+YPPCPRPD  IG+KPHADG+AFT LL DK+V
Sbjct: 181 AMARSLELEENCFLEMYGENATMDTRFNMYPPCPRPDKVIGVKPHADGSAFTLLLPDKDV 240

Query: 184 EGLQVLKDNQWYRVPVIPEAFVINVGDQIE 213
           EGLQ LKD +WY+ P++P+  +INVGDQ+E
Sbjct: 241 EGLQFLKDGKWYKAPIVPDTILINVGDQME 270

Length = 348
>gnl|CDD|215404 PLN02758, PLN02758, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|215220 PLN02393, PLN02393, leucoanthocyanidin dioxygenase like protein Back     alignment and domain information
>gnl|CDD|215129 PLN02216, PLN02216, protein SRG1 Back     alignment and domain information
>gnl|CDD|166345 PLN02704, PLN02704, flavonol synthase Back     alignment and domain information
>gnl|CDD|215614 PLN03178, PLN03178, leucoanthocyanidin dioxygenase; Provisional Back     alignment and domain information
>gnl|CDD|178245 PLN02639, PLN02639, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|215510 PLN02947, PLN02947, oxidoreductase Back     alignment and domain information
>gnl|CDD|178500 PLN02912, PLN02912, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|178576 PLN02997, PLN02997, flavonol synthase Back     alignment and domain information
>gnl|CDD|226022 COG3491, PcbC, Isopenicillin N synthase and related dioxygenases [General function prediction only] Back     alignment and domain information
>gnl|CDD|166642 PLN03001, PLN03001, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|178130 PLN02515, PLN02515, naringenin,2-oxoglutarate 3-dioxygenase Back     alignment and domain information
>gnl|CDD|178351 PLN02750, PLN02750, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|215142 PLN02254, PLN02254, gibberellin 3-beta-dioxygenase Back     alignment and domain information
>gnl|CDD|178492 PLN02904, PLN02904, oxidoreductase Back     alignment and domain information
>gnl|CDD|215168 PLN02299, PLN02299, 1-aminocyclopropane-1-carboxylate oxidase Back     alignment and domain information
>gnl|CDD|215534 PLN02984, PLN02984, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|215156 PLN02276, PLN02276, gibberellin 20-oxidase Back     alignment and domain information
>gnl|CDD|222608 pfam14226, DIOX_N, non-haem dioxygenase in morphine synthesis N-terminal Back     alignment and domain information
>gnl|CDD|178025 PLN02403, PLN02403, aminocyclopropanecarboxylate oxidase Back     alignment and domain information
>gnl|CDD|215267 PLN02485, PLN02485, oxidoreductase Back     alignment and domain information
>gnl|CDD|217403 pfam03171, 2OG-FeII_Oxy, 2OG-Fe(II) oxygenase superfamily Back     alignment and domain information
>gnl|CDD|140299 PTZ00273, PTZ00273, oxidase reductase; Provisional Back     alignment and domain information
>gnl|CDD|177993 PLN02365, PLN02365, 2-oxoglutarate-dependent dioxygenase Back     alignment and domain information
>gnl|CDD|178579 PLN03002, PLN03002, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|177816 PLN02156, PLN02156, gibberellin 2-beta-dioxygenase Back     alignment and domain information
>gnl|CDD|178720 PLN03176, PLN03176, flavanone-3-hydroxylase; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 213
PLN02216357 protein SRG1 100.0
PLN02758361 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02254358 gibberellin 3-beta-dioxygenase 100.0
COG3491322 PcbC Isopenicillin N synthase and related dioxygen 100.0
PLN00417348 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02276361 gibberellin 20-oxidase 100.0
PLN02515358 naringenin,2-oxoglutarate 3-dioxygenase 100.0
PLN02997325 flavonol synthase 100.0
PLN02485329 oxidoreductase 100.0
PLN03178360 leucoanthocyanidin dioxygenase; Provisional 100.0
PLN02947374 oxidoreductase 100.0
PLN02393362 leucoanthocyanidin dioxygenase like protein 100.0
KOG0143322 consensus Iron/ascorbate family oxidoreductases [S 100.0
PLN02912348 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PTZ00273320 oxidase reductase; Provisional 100.0
PLN02750345 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02704335 flavonol synthase 100.0
PLN02639337 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN03002332 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02904357 oxidoreductase 100.0
PLN02299321 1-aminocyclopropane-1-carboxylate oxidase 100.0
PLN02156335 gibberellin 2-beta-dioxygenase 100.0
PLN02984341 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02403303 aminocyclopropanecarboxylate oxidase 100.0
PLN02365300 2-oxoglutarate-dependent dioxygenase 100.0
PLN03001262 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PF14226116 DIOX_N: non-haem dioxygenase in morphine synthesis 99.88
PLN03176120 flavanone-3-hydroxylase; Provisional 99.69
PF0317198 2OG-FeII_Oxy: 2OG-Fe(II) oxygenase superfamily Ent 99.6
PF13640100 2OG-FeII_Oxy_3: 2OG-Fe(II) oxygenase superfamily; 90.46
smart00702178 P4Hc Prolyl 4-hydroxylase alpha subunit homologues 87.06
PRK05467226 Fe(II)-dependent oxygenase superfamily protein; Pr 81.32
>PLN02216 protein SRG1 Back     alignment and domain information 
Probab=100.00  E-value=1.1e-58  Score=384.16  Aligned_cols=210  Identities=39%  Similarity=0.732  Sum_probs=189.3

Q ss_pred             HHHHHHHHHHhhhcceEEEEccCCCHHHHHHHHHHHHHhhcCCHHHHhhhccccCCcccccccccccCCCccCChhHhhh
Q 042664            3 AQELEKLRSVLSSWGCFQAINHGIEPAFLDKVKAVGRQFFALPAEEKNKYARDIAIGFEGYANHIINGEEQAFDWIDRLY   82 (213)
Q Consensus         3 ~~~~~~l~~A~~~~Gff~l~~hgi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~~~~~~~Gy~~~~~~~~~~~~d~~e~~~   82 (213)
                      ++++++|.+||++||||||+|||||.++++++++++++||+||.|+|+++..... .++||+........+..||+|.+.
T Consensus        68 ~~~~~~l~~Ac~~~GFF~v~nHGI~~~li~~~~~~~~~FF~LP~eeK~k~~~~~~-~~~Gy~~~~~~~~~~~~d~~e~~~  146 (357)
T PLN02216         68 DSEVEKLDFACKEWGFFQLVNHGIDSSFLDKVKSEIQDFFNLPMEEKKKLWQRPG-EIEGFGQAFVVSEDQKLDWADMFF  146 (357)
T ss_pred             HHHHHHHHHHHHHCcEEEEECCCCCHHHHHHHHHHHHHHHcCCHHHHHhhhcCCC-CccccCccccccccccCCceeeee
Confidence            4689999999999999999999999999999999999999999999999966544 578997665444456789999998


Q ss_pred             ccCCCCccccCCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHhHcCCChhHHHhHhCCCCccceEeeecCCCCCCCCc
Q 042664           83 LITGPEDRKQLKFWPENPESFRKILEEYNAKMVKLNEFLLKAIGLALNLEENCFLDMYGEEATMIAVYNLYPPCPRPDLA  162 (213)
Q Consensus        83 ~~~~p~~~~~~~~wP~~~~~f~~~~~~~~~~~~~l~~~ll~~l~~~Lgl~~~~~~~~~~~~~~~~lr~~~Yp~~~~~~~~  162 (213)
                      +...|.....+|.||+.++.||+++++|++.|.+++.+|+++|+++||+++++|.+.+.....+.||++|||||+.++..
T Consensus       147 ~~~~p~~~~~~~~WP~~p~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~~~~~~~~~~~lRl~~YPp~p~~~~~  226 (357)
T PLN02216        147 LTMQPVRLRKPHLFPKLPLPFRDTLETYSAEVKSIAKILFAKMASALEIKPEEMEKLFDDDLGQSIRMNYYPPCPQPDQV  226 (357)
T ss_pred             eeccCcccccchhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHhccCchheeEEeecCCCCCcccc
Confidence            87666555678899998999999999999999999999999999999999999998884335679999999999988889


Q ss_pred             cccCCccCCCceEEEeeCCCCCceeEeeCCceEEccCCCCcEEEecCccCC
Q 042664          163 IGLKPHADGTAFTYLLQDKEVEGLQVLKDNQWYRVPVIPEAFVINVGDQIE  213 (213)
Q Consensus       163 ~~~~~HtD~~~lTll~q~~~~~GLqv~~~g~W~~v~~~~~~~iVn~Gd~le  213 (213)
                      +|+++|||+|+||||+|+++++||||+.+|+|++|+|.||++||||||+||
T Consensus       227 ~G~~~HtD~g~lTlL~q~~~v~GLQV~~~g~Wi~V~p~pgalvVNiGD~L~  277 (357)
T PLN02216        227 IGLTPHSDAVGLTILLQVNEVEGLQIKKDGKWVSVKPLPNALVVNVGDILE  277 (357)
T ss_pred             cCccCcccCceEEEEEecCCCCceeEEECCEEEECCCCCCeEEEEcchhhH
Confidence            999999999999999995479999999999999999999999999999996

>PLN02758 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02254 gibberellin 3-beta-dioxygenase Back     alignment and domain information
>COG3491 PcbC Isopenicillin N synthase and related dioxygenases [General function prediction only] Back     alignment and domain information
>PLN00417 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02276 gibberellin 20-oxidase Back     alignment and domain information
>PLN02515 naringenin,2-oxoglutarate 3-dioxygenase Back     alignment and domain information
>PLN02997 flavonol synthase Back     alignment and domain information
>PLN02485 oxidoreductase Back     alignment and domain information
>PLN03178 leucoanthocyanidin dioxygenase; Provisional Back     alignment and domain information
>PLN02947 oxidoreductase Back     alignment and domain information
>PLN02393 leucoanthocyanidin dioxygenase like protein Back     alignment and domain information
>KOG0143 consensus Iron/ascorbate family oxidoreductases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only] Back     alignment and domain information
>PLN02912 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PTZ00273 oxidase reductase; Provisional Back     alignment and domain information
>PLN02750 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02704 flavonol synthase Back     alignment and domain information
>PLN02639 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN03002 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02904 oxidoreductase Back     alignment and domain information
>PLN02299 1-aminocyclopropane-1-carboxylate oxidase Back     alignment and domain information
>PLN02156 gibberellin 2-beta-dioxygenase Back     alignment and domain information
>PLN02984 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02403 aminocyclopropanecarboxylate oxidase Back     alignment and domain information
>PLN02365 2-oxoglutarate-dependent dioxygenase Back     alignment and domain information
>PLN03001 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PF14226 DIOX_N: non-haem dioxygenase in morphine synthesis N-terminal; PDB: 3OOX_A 1BK0_A 1IPS_B 1QIQ_A 1OC1_A 2Y86_A 2Y60_A 1W03_A 2VE1_A 1QJF_A Back     alignment and domain information
>PLN03176 flavanone-3-hydroxylase; Provisional Back     alignment and domain information
>PF03171 2OG-FeII_Oxy: 2OG-Fe(II) oxygenase superfamily Entry for Lysyl hydrolases This Prosite entry is a sub-family of the Pfam entry; InterPro: IPR005123 This domain is found in members of the 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily [], as well as the C-terminal of prolyl 4-hydroxylase alpha subunit Back     alignment and domain information
>PF13640 2OG-FeII_Oxy_3: 2OG-Fe(II) oxygenase superfamily; PDB: 3DKQ_B 3GZE_D 3HQR_A 2Y34_A 2G1M_A 2G19_A 3OUI_A 3OUJ_A 2HBU_A 2Y33_A Back     alignment and domain information
>smart00702 P4Hc Prolyl 4-hydroxylase alpha subunit homologues Back     alignment and domain information
>PRK05467 Fe(II)-dependent oxygenase superfamily protein; Provisional Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query213
1gp5_A356 Anthocyanidin Synthase From Arabidopsis Thaliana Co 6e-34
2brt_A355 Anthocyanidin Synthase From Arabidopsis Thaliana Co 6e-34
1gp4_A356 Anthocyanidin Synthase From Arabidopsis Thaliana (S 4e-33
1w9y_A319 The Structure Of Acc Oxidase Length = 319 7e-22
3oox_A312 Crystal Structure Of A Putative 2og-Fe(Ii) Oxygenas 3e-09
2bjs_A325 Isopenicillin N Synthase C-Terminal Truncation Muta 3e-04
1ips_A331 Isopenicillin N Synthase From Aspergillus Nidulans 3e-04
>pdb|1GP5|A Chain A, Anthocyanidin Synthase From Arabidopsis Thaliana Complexed With Trans-Dihydroquercetin Length = 356 Back     alignment and structure 
Iteration: 1

 Score =  140 bits (353), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 70/211 (33%), Positives = 115/211 (54%), Gaps = 4/211 (1%)
Query: 6   LEKLRSVLSSWGCFQAINHGIEPAFLDKVKAVGRQFFALPAEEKNKYARDIAIG-FEGYA 64
           +E+L+     WG    INHGI    +++VK  G +FF+L  EEK KYA D A G  +GY 
Sbjct: 67  IEELKKASLDWGVMHLINHGIPADLMERVKKAGEEFFSLSVEEKEKYANDQATGKIQGYG 126
Query: 65  NHIINGEEQAFDWIDRLYLITGPEDRKQLKFWPENPESFRKILEEYNAKMVKLNEFLLKA 124
           + + N      +W D  + +  PE+++ L  WP+ P  + +   EY   +  L   + KA
Sbjct: 127 SKLANNASGQLEWEDYFFHLAYPEEKRDLSIWPKTPSDYIEATSEYAKCLRLLATKVFKA 186
Query: 125 IGLALNLEENCFLDMYG--EEATMIAVYNLYPPCPRPDLAIGLKPHADGTAFTYLLQDKE 182
           + + L LE +      G  EE  +    N YP CP+P+LA+G++ H D +A T++L +  
Sbjct: 187 LSVGLGLEPDRLEKEVGGLEELLLQMKINYYPKCPQPELALGVEAHTDVSALTFILHNM- 245
Query: 183 VEGLQVLKDNQWYRVPVIPEAFVINVGDQIE 213
           V GLQ+  + +W     +P++ V+++GD +E
Sbjct: 246 VPGLQLFYEGKWVTAKCVPDSIVMHIGDTLE 276
>pdb|2BRT|A Chain A, Anthocyanidin Synthase From Arabidopsis Thaliana Complexed With Naringenin Length = 355 Back     alignment and structure
>pdb|1GP4|A Chain A, Anthocyanidin Synthase From Arabidopsis Thaliana (Selenomethionine Substituted) Length = 356 Back     alignment and structure
>pdb|1W9Y|A Chain A, The Structure Of Acc Oxidase Length = 319 Back     alignment and structure
>pdb|3OOX|A Chain A, Crystal Structure Of A Putative 2og-Fe(Ii) Oxygenase Family Protein (Cc_0200) From Caulobacter Crescentus At 1.44 A Resolution Length = 312 Back     alignment and structure
>pdb|2BJS|A Chain A, Isopenicillin N Synthase C-Terminal Truncation Mutant Length = 325 Back     alignment and structure
>pdb|1IPS|A Chain A, Isopenicillin N Synthase From Aspergillus Nidulans (Manganese Complex) Length = 331 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query213
1gp6_A356 Leucoanthocyanidin dioxygenase; 2-oxoglutarate dep 1e-95
1w9y_A319 1-aminocyclopropane-1-carboxylate oxidase 1; oxyge 2e-91
1dcs_A311 Deacetoxycephalosporin C synthase; ferrous oxygena 4e-55
1odm_A331 Isopenicillin N synthase; antibiotic biosynthesis, 2e-50
3oox_A312 Putative 2OG-Fe(II) oxygenase family protein; stru 5e-50
3on7_A280 Oxidoreductase, iron/ascorbate family; structural 1e-48
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 5e-05
>1gp6_A Leucoanthocyanidin dioxygenase; 2-oxoglutarate dependent dioxygenase, flavonoid biosynthesis; HET: MES QUE DH2; 1.75A {Arabidopsis thaliana} SCOP: b.82.2.1 PDB: 1gp5_A* 1gp4_A* 2brt_A* Length = 356 Back     alignment and structure
 Score =  281 bits (722), Expect = 1e-95
 Identities = 70/216 (32%), Positives = 115/216 (53%), Gaps = 4/216 (1%)

Query: 1   SSAQELEKLRSVLSSWGCFQAINHGIEPAFLDKVKAVGRQFFALPAEEKNKYARDIAIG- 59
                +E+L+     WG    INHGI    +++VK  G +FF+L  EEK KYA D A G 
Sbjct: 62  IRENCIEELKKASLDWGVMHLINHGIPADLMERVKKAGEEFFSLSVEEKEKYANDQATGK 121

Query: 60  FEGYANHIINGEEQAFDWIDRLYLITGPEDRKQLKFWPENPESFRKILEEYNAKMVKLNE 119
            +GY + + N      +W D  + +  PE+++ L  WP+ P  + +   EY   +  L  
Sbjct: 122 IQGYGSKLANNASGQLEWEDYFFHLAYPEEKRDLSIWPKTPSDYIEATSEYAKCLRLLAT 181

Query: 120 FLLKAIGLALNLEENCFLDMYG--EEATMIAVYNLYPPCPRPDLAIGLKPHADGTAFTYL 177
            + KA+ + L LE +      G  EE  +    N YP CP+P+LA+G++ H D +A T++
Sbjct: 182 KVFKALSVGLGLEPDRLEKEVGGLEELLLQMKINYYPKCPQPELALGVEAHTDVSALTFI 241

Query: 178 LQDKEVEGLQVLKDNQWYRVPVIPEAFVINVGDQIE 213
           L +  V GLQ+  + +W     +P++ V+++GD +E
Sbjct: 242 LHN-MVPGLQLFYEGKWVTAKCVPDSIVMHIGDTLE 276
>1w9y_A 1-aminocyclopropane-1-carboxylate oxidase 1; oxygenase, 2OG oxygenase, ACCO, ACC oxidase; 2.1A {Petunia hybrida} SCOP: b.82.2.1 PDB: 1wa6_X Length = 319 Back     alignment and structure
>1dcs_A Deacetoxycephalosporin C synthase; ferrous oxygenase, 2-oxoglutarate, oxidoreduc antibiotics, merohedral twinning; 1.30A {Streptomyces clavuligerus} SCOP: b.82.2.1 PDB: 1rxf_A 1rxg_A* 1unb_A* 1uo9_A 1uob_A* 1uof_A* 1uog_A* 2jb8_A 1w28_A 1w2a_X 1w2n_A* 1w2o_A* 1hjg_A 1hjf_A 1e5h_A 1e5i_A* Length = 311 Back     alignment and structure
>1odm_A Isopenicillin N synthase; antibiotic biosynthesis, B-lactam antibiotic, oxygenase, penicillin biosynthesis, oxidoreductase, iron; HET: ASV; 1.15A {Emericella nidulans} SCOP: b.82.2.1 PDB: 1blz_A* 1hb1_A* 1hb2_A* 1hb3_A* 1hb4_A* 1ips_A 1obn_A* 1oc1_A* 1bk0_A* 1odn_A* 1qiq_A* 1qje_A* 1qjf_A* 1uzw_A* 1w03_A* 1w04_A* 1w05_A* 1w06_A* 1w3v_A* 1w3x_A* ... Length = 331 Back     alignment and structure
>3oox_A Putative 2OG-Fe(II) oxygenase family protein; structural genomics, joint center for structural genomics; HET: MSE; 1.44A {Caulobacter crescentus CB15} Length = 312 Back     alignment and structure
>3on7_A Oxidoreductase, iron/ascorbate family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.20A {Shewanella oneidensis} Length = 280 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query213
1gp6_A356 Leucoanthocyanidin dioxygenase; 2-oxoglutarate dep 100.0
3oox_A312 Putative 2OG-Fe(II) oxygenase family protein; stru 100.0
1w9y_A319 1-aminocyclopropane-1-carboxylate oxidase 1; oxyge 100.0
1dcs_A311 Deacetoxycephalosporin C synthase; ferrous oxygena 100.0
3on7_A280 Oxidoreductase, iron/ascorbate family; structural 100.0
1odm_A331 Isopenicillin N synthase; antibiotic biosynthesis, 100.0
3dkq_A243 PKHD-type hydroxylase SBAL_3634; putative oxygenas 86.11
2hbt_A247 EGL nine homolog 1; prolyl hydroxylase, hypoxia in 85.41
>1gp6_A Leucoanthocyanidin dioxygenase; 2-oxoglutarate dependent dioxygenase, flavonoid biosynthesis; HET: MES QUE DH2; 1.75A {Arabidopsis thaliana} SCOP: b.82.2.1 PDB: 1gp5_A* 1gp4_A* 2brt_A* Back     alignment and structure
Probab=100.00  E-value=3.9e-58  Score=380.88  Aligned_cols=209  Identities=33%  Similarity=0.706  Sum_probs=190.9

Q ss_pred             HHHHHHHHHhhhcceEEEEccCCCHHHHHHHHHHHHHhhcCCHHHHhhhccccC-CcccccccccccCCCccCChhHhhh
Q 042664            4 QELEKLRSVLSSWGCFQAINHGIEPAFLDKVKAVGRQFFALPAEEKNKYARDIA-IGFEGYANHIINGEEQAFDWIDRLY   82 (213)
Q Consensus         4 ~~~~~l~~A~~~~Gff~l~~hgi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~~~-~~~~Gy~~~~~~~~~~~~d~~e~~~   82 (213)
                      +++++|.+||++||||||+||||+.++++++++.+++||+||.|+|+++..... ..++||+........+..||+|.|.
T Consensus        65 ~~~~~l~~A~~~~GFF~v~nHGi~~~l~~~~~~~~~~FF~lP~eeK~~~~~~~~~~~~~Gy~~~~~~~~~~~~d~kE~~~  144 (356)
T 1gp6_A           65 NCIEELKKASLDWGVMHLINHGIPADLMERVKKAGEEFFSLSVEEKEKYANDQATGKIQGYGSKLANNASGQLEWEDYFF  144 (356)
T ss_dssp             HHHHHHHHHHHHTSEEEEESCSCCHHHHHHHHHHHHHHHTSCHHHHGGGBCBGGGTBCSEEECCCCCSTTCCCCSCEEEE
T ss_pred             HHHHHHHHHHHhCCEEEEeCCCCCHHHHHHHHHHHHHHHCCCHHHHHhhcccccccCccccCcCcccCCCCCCChhheee
Confidence            478999999999999999999999999999999999999999999999976543 4689998876655567889999999


Q ss_pred             ccCCCCccccCCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHhHcCCChhHHHhHhCC--CCccceEeeecCCCCCCC
Q 042664           83 LITGPEDRKQLKFWPENPESFRKILEEYNAKMVKLNEFLLKAIGLALNLEENCFLDMYGE--EATMIAVYNLYPPCPRPD  160 (213)
Q Consensus        83 ~~~~p~~~~~~~~wP~~~~~f~~~~~~~~~~~~~l~~~ll~~l~~~Lgl~~~~~~~~~~~--~~~~~lr~~~Yp~~~~~~  160 (213)
                      +...|.....+|.||+.+|.||+.+++|++.|.+++..|+++|+++||+++++|.+.+..  .+.+.||++|||||+.++
T Consensus       145 ~~~~p~~~~~~~~wP~~~~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~~~~~~~~~~~~~lrl~~YPp~~~~~  224 (356)
T 1gp6_A          145 HLAYPEEKRDLSIWPKTPSDYIEATSEYAKCLRLLATKVFKALSVGLGLEPDRLEKEVGGLEELLLQMKINYYPKCPQPE  224 (356)
T ss_dssp             EEEESGGGCCGGGSCCSSTTHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCTTHHHHHTTHHHHCEEEEEEEEECCCSSTT
T ss_pred             eecCCccccccccCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHhcccCCccceeeeeecCCCCCcc
Confidence            887665445678999999999999999999999999999999999999999999998832  478899999999999988


Q ss_pred             CccccCCccCCCceEEEeeCCCCCceeEeeCCceEEccCCCCcEEEecCccCC
Q 042664          161 LAIGLKPHADGTAFTYLLQDKEVEGLQVLKDNQWYRVPVIPEAFVINVGDQIE  213 (213)
Q Consensus       161 ~~~~~~~HtD~~~lTll~q~~~~~GLqv~~~g~W~~v~~~~~~~iVn~Gd~le  213 (213)
                      ..+|+++|||+|+||||+|| .++||||+.+|+|++|+|.||++||||||+||
T Consensus       225 ~~~g~~~HtD~g~lTlL~qd-~v~GLQV~~~g~Wi~V~p~pgalvVNiGD~l~  276 (356)
T 1gp6_A          225 LALGVEAHTDVSALTFILHN-MVPGLQLFYEGKWVTAKCVPDSIVMHIGDTLE  276 (356)
T ss_dssp             TCCSEEEECCCSSEEEEEEC-SCCCEEEEETTEEEECCCCTTCEEEEECHHHH
T ss_pred             cccCcCCccCCCeEEEEEEc-CCCCeEEecCCcEEECcCCCCeEEEEeccHHH
Confidence            88999999999999999998 79999999999999999999999999999985
>3oox_A Putative 2OG-Fe(II) oxygenase family protein; structural genomics, joint center for structural genomics; HET: MSE; 1.44A {Caulobacter crescentus CB15} Back     alignment and structure
>1w9y_A 1-aminocyclopropane-1-carboxylate oxidase 1; oxygenase, 2OG oxygenase, ACCO, ACC oxidase; 2.1A {Petunia hybrida} SCOP: b.82.2.1 PDB: 1wa6_X Back     alignment and structure
>1dcs_A Deacetoxycephalosporin C synthase; ferrous oxygenase, 2-oxoglutarate, oxidoreduc antibiotics, merohedral twinning; 1.30A {Streptomyces clavuligerus} SCOP: b.82.2.1 PDB: 1rxf_A 1rxg_A* 1unb_A* 1uo9_A 1uob_A* 1uof_A* 1uog_A* 2jb8_A 1w28_A 1w2a_X 1w2n_A* 1w2o_A* 1hjg_A 1hjf_A 1e5h_A 1e5i_A* Back     alignment and structure
>3on7_A Oxidoreductase, iron/ascorbate family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.20A {Shewanella oneidensis} Back     alignment and structure
>1odm_A Isopenicillin N synthase; antibiotic biosynthesis, B-lactam antibiotic, oxygenase, penicillin biosynthesis, oxidoreductase, iron; HET: ASV; 1.15A {Emericella nidulans} SCOP: b.82.2.1 PDB: 1blz_A* 1hb1_A* 1hb2_A* 1hb3_A* 1hb4_A* 1ips_A 1obn_A* 1oc1_A* 1bk0_A* 1odn_A* 1qiq_A* 1qje_A* 1qjf_A* 1uzw_A* 1w03_A* 1w04_A* 1w05_A* 1w06_A* 1w3v_A* 1w3x_A* ... Back     alignment and structure
>3dkq_A PKHD-type hydroxylase SBAL_3634; putative oxygenase, structural genomics, JOI for structural genomics, JCSG; 2.26A {Shewanella baltica OS155} Back     alignment and structure
>2hbt_A EGL nine homolog 1; prolyl hydroxylase, hypoxia inducible factor, HIF, 2- oxoglutarate, oxygenase, oxidoreductase; HET: UN9; 1.60A {Homo sapiens} PDB: 2hbu_A* 2g1m_A* 3hqu_A* 3hqr_A* 2y33_A* 2y34_A* 2g19_A* 3ouj_A* 3ouh_A* 3oui_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 213
d1gp6a_349 b.82.2.1 (A:) Anthocyanidin synthase {Mouse-ear cr 6e-36
d1w9ya1307 b.82.2.1 (A:2-308) 1-aminocyclopropane-1-carboxyla 2e-35
d1dcsa_311 b.82.2.1 (A:) Deacetoxycephalosporin C synthase {S 1e-32
d1odma_329 b.82.2.1 (A:) Isopenicillin N synthase {Emericella 1e-17
>d1gp6a_ b.82.2.1 (A:) Anthocyanidin synthase {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 349 Back     information, alignment and structure

class: All beta proteins
fold: Double-stranded beta-helix
superfamily: Clavaminate synthase-like
family: Penicillin synthase-like
domain: Anthocyanidin synthase
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

 Score =  126 bits (318), Expect = 6e-36
 Identities = 70/216 (32%), Positives = 115/216 (53%), Gaps = 4/216 (1%)

Query: 1   SSAQELEKLRSVLSSWGCFQAINHGIEPAFLDKVKAVGRQFFALPAEEKNKYARDIAIG- 59
                +E+L+     WG    INHGI    +++VK  G +FF+L  EEK KYA D A G 
Sbjct: 61  IRENCIEELKKASLDWGVMHLINHGIPADLMERVKKAGEEFFSLSVEEKEKYANDQATGK 120

Query: 60  FEGYANHIINGEEQAFDWIDRLYLITGPEDRKQLKFWPENPESFRKILEEYNAKMVKLNE 119
            +GY + + N      +W D  + +  PE+++ L  WP+ P  + +   EY   +  L  
Sbjct: 121 IQGYGSKLANNASGQLEWEDYFFHLAYPEEKRDLSIWPKTPSDYIEATSEYAKCLRLLAT 180

Query: 120 FLLKAIGLALNLEENCFLDMYG--EEATMIAVYNLYPPCPRPDLAIGLKPHADGTAFTYL 177
            + KA+ + L LE +      G  EE  +    N YP CP+P+LA+G++ H D +A T++
Sbjct: 181 KVFKALSVGLGLEPDRLEKEVGGLEELLLQMKINYYPKCPQPELALGVEAHTDVSALTFI 240

Query: 178 LQDKEVEGLQVLKDNQWYRVPVIPEAFVINVGDQIE 213
           L +  V GLQ+  + +W     +P++ V+++GD +E
Sbjct: 241 LHN-MVPGLQLFYEGKWVTAKCVPDSIVMHIGDTLE 275
>d1w9ya1 b.82.2.1 (A:2-308) 1-aminocyclopropane-1-carboxylate oxidase 1 {Petunia hybrida [TaxId: 4102]} Length = 307 Back     information, alignment and structure
>d1dcsa_ b.82.2.1 (A:) Deacetoxycephalosporin C synthase {Streptomyces clavuligerus [TaxId: 1901]} Length = 311 Back     information, alignment and structure
>d1odma_ b.82.2.1 (A:) Isopenicillin N synthase {Emericella nidulans [TaxId: 162425]} Length = 329 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query213
d1gp6a_349 Anthocyanidin synthase {Mouse-ear cress (Arabidops 100.0
d1w9ya1307 1-aminocyclopropane-1-carboxylate oxidase 1 {Petun 100.0
d1dcsa_311 Deacetoxycephalosporin C synthase {Streptomyces cl 100.0
d1odma_329 Isopenicillin N synthase {Emericella nidulans [Tax 100.0
>d1gp6a_ b.82.2.1 (A:) Anthocyanidin synthase {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Back     information, alignment and structure
class: All beta proteins
fold: Double-stranded beta-helix
superfamily: Clavaminate synthase-like
family: Penicillin synthase-like
domain: Anthocyanidin synthase
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=3.1e-52  Score=343.85  Aligned_cols=209  Identities=33%  Similarity=0.710  Sum_probs=181.1

Q ss_pred             HHHHHHHHHhhhcceEEEEccCCCHHHHHHHHHHHHHhhcCCHHHHhhhcccc-CCcccccccccccCCCccCChhHhhh
Q 042664            4 QELEKLRSVLSSWGCFQAINHGIEPAFLDKVKAVGRQFFALPAEEKNKYARDI-AIGFEGYANHIINGEEQAFDWIDRLY   82 (213)
Q Consensus         4 ~~~~~l~~A~~~~Gff~l~~hgi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~~-~~~~~Gy~~~~~~~~~~~~d~~e~~~   82 (213)
                      +++++|.+||+++|||||+||||+.++++++++++++||+||.|+|+++.... .+.+.||+...........++.+.+.
T Consensus        64 ~~~~~l~~A~~~~GFf~l~nHGI~~~li~~~~~~~~~FF~lP~eeK~k~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~  143 (349)
T d1gp6a_          64 NCIEELKKASLDWGVMHLINHGIPADLMERVKKAGEEFFSLSVEEKEKYANDQATGKIQGYGSKLANNASGQLEWEDYFF  143 (349)
T ss_dssp             HHHHHHHHHHHHTSEEEEESCSCCHHHHHHHHHHHHHHHTSCHHHHGGGBCBGGGTBCSEEECCCCCSTTCCCCSCEEEE
T ss_pred             HHHHHHHHHHHhCCEEEEEccCCCHHHHHHHHHHHHHHHcCCHHHHhhhhcccccCCccccccccccccccccchhhhhc
Confidence            57899999999999999999999999999999999999999999999996643 32456666555544555566655433


Q ss_pred             ccCCCCccccCCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHhHcCCChhHHHhHhC--CCCccceEeeecCCCCCCC
Q 042664           83 LITGPEDRKQLKFWPENPESFRKILEEYNAKMVKLNEFLLKAIGLALNLEENCFLDMYG--EEATMIAVYNLYPPCPRPD  160 (213)
Q Consensus        83 ~~~~p~~~~~~~~wP~~~~~f~~~~~~~~~~~~~l~~~ll~~l~~~Lgl~~~~~~~~~~--~~~~~~lr~~~Yp~~~~~~  160 (213)
                      ....+.....+|.||..++.|++.+++|++.|.+++.+|+++++++||+++++|.+.+.  +.+.+.||++|||+++.++
T Consensus       144 ~~~~~~~~~~~n~wp~~~~~f~e~~~~~~~~~~~la~~ll~~la~~Lgl~~~~~~~~~~~~~~~~~~lrl~~Yp~~~~~~  223 (349)
T d1gp6a_         144 HLAYPEEKRDLSIWPKTPSDYIEATSEYAKCLRLLATKVFKALSVGLGLEPDRLEKEVGGLEELLLQMKINYYPKCPQPE  223 (349)
T ss_dssp             EEEESGGGCCGGGSCCSSTTHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCTTHHHHHTTHHHHCEEEEEEEEECCCSSTT
T ss_pred             ccccccccccccccccccchHHHHHHHHHHHHHHHHHhhhHHHHHHcCCCHHHHHHHhccccccceeeeecccccccchh
Confidence            33334444567899999999999999999999999999999999999999999987774  4567799999999999888


Q ss_pred             CccccCCccCCCceEEEeeCCCCCceeEeeCCceEEccCCCCcEEEecCccCC
Q 042664          161 LAIGLKPHADGTAFTYLLQDKEVEGLQVLKDNQWYRVPVIPEAFVINVGDQIE  213 (213)
Q Consensus       161 ~~~~~~~HtD~~~lTll~q~~~~~GLqv~~~g~W~~v~~~~~~~iVn~Gd~le  213 (213)
                      ..+|+++|||+|+||||+|+ .++||||+.+|+|++|+|.+|++|||+||+||
T Consensus       224 ~~~g~~~HtD~g~lTlL~q~-~~~GLqv~~~g~W~~V~p~~~a~vVNvGD~l~  275 (349)
T d1gp6a_         224 LALGVEAHTDVSALTFILHN-MVPGLQLFYEGKWVTAKCVPDSIVMHIGDTLE  275 (349)
T ss_dssp             TCCSEEEECCCSSEEEEEEC-SCCCEEEEETTEEEECCCCTTCEEEEECHHHH
T ss_pred             hccccccCCCCcceEEEecc-CCcceeeecCCceEEccCCCCCeeeeHHhHHH
Confidence            89999999999999999998 89999999999999999999999999999985
>d1w9ya1 b.82.2.1 (A:2-308) 1-aminocyclopropane-1-carboxylate oxidase 1 {Petunia hybrida [TaxId: 4102]} Back     information, alignment and structure
>d1dcsa_ b.82.2.1 (A:) Deacetoxycephalosporin C synthase {Streptomyces clavuligerus [TaxId: 1901]} Back     information, alignment and structure
>d1odma_ b.82.2.1 (A:) Isopenicillin N synthase {Emericella nidulans [TaxId: 162425]} Back     information, alignment and structure