Citrus Sinensis ID: 042673

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280
Protein Sequence
MDVATPVVASNWWHDVNESPLWQDRIFHVLAALYGLVAAVALVQLIRIQLRVPEYGWTTQKVFHFLNFIVNAVRCVVFVFRRDVQKLQPDIVRHIVLDMPSLAFFTTYALLVLFWAEIYYQARAVSTDGLRPSFFTVNAVVYIVQIALWLVLCWKPIPVIIILSKMFFAAVSLFAALGFLLYGGRLFLMLQRFPVESKGRRKKLQEVGYVTTICFTCFLVRCIMMCFNAFDKAADLDVLDHPVLNFIYYLLVEILPSTLVLFILRKLPPKRGITQYHPIR
Secondary Structure (PSIPRED)
ccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccEEEHHHHHHHHHHHHHHEEEEEEEEcEEEEccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccEEEEEEHHHHHHHHHHHHHEEcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHEEcEEHHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccccccHccccHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHEEEEEEcHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccc
Coil and Loop (DISEMBL)
mdvatpvvasnwwhdvnesplwQDRIFHVLAALYGLVAAVALVQLIRIQLrvpeygwttQKVFHFLNFIVNAVRCVVFVFRrdvqklqpdIVRHIvldmpslafFTTYALLVLFWAEIYYQARavstdglrpsffTVNAVVYIVQIALWLVLCWKPIPVIIILSKMFFAAVSLFAALGFLLYGGRLFLMlqrfpveskgrrkkLQEVGYVTTICFTCFLVRCIMMCFNAFdkaadldvldhpVLNFIYYLLVEILPSTLVLFILrklppkrgitqyhpir
Flexible Loop (DISEMBL)
mdvatpvvasnwwhdvneSPLWQDRIFHVLAALYGLVAAVALVQLIRIQLRVPEYGWTTQKVFHFLNFIVNAVRCVVFVFRRDVQKLQPDIVRHIVLDMPSLAFFTTYALLVLFWAEIYYQARAVSTDGLRPSFFTVNAVVYIVQIALWLVLCWKPIPVIIILSKMFFAAVSLFAALGFLLYGGRLFLMLQRFPVeskgrrkklqevgyVTTICFTCFLVRCIMMCFNAFDKAADLDVLDHPVLNFIYYLLVEILPSTLVLFILrklppkrgitqyhpir
Low Complexity Region (SEG)
MDVATPVVASNWWHDVNESPLWQDRIFHvlaalyglvaavalvqlIRIQLRVPEYGWTTQKVFHFLNfivnavrcvvfvfrrdvQKLQPDIVRHIVLDMPSLAFFTTYALLVLFWAEIYYQARAVSTDGLRPSFFTVNAVVYIVQIALWLVLCWKPIPVIIILSKMFFAAVSlfaalgfllyggrlflmlQRFPVESKGRRKKLQEVGYVTTICFTCFLVRCIMMCFNAFDKAADLDVLDHPVLNFIYYLLVEILPSTLVLFILRKLPPKRGITQYHPIR
Disordered region (IsUnstruct)
*****PVVASNWWHDVNESPLWQDRIFHVLAALYGLVAAVALVQLIRIQLRVPEYGWTTQKVFHFLNFIVNAVRCVVFVFRRDVQKLQPDIVRHIVLDMPSLAFFTTYALLVLFWAEIYYQARAVSTDGLRPSFFTVNAVVYIVQIALWLVLCWKPIPVIIILSKMFFAAVSLFAALGFLLYGGRLFLMLQRFPVESKGRRKKLQEVGYVTTICFTCFLVRCIMMCFNAFDKAADLDVLDHPVLNFIYYLLVEILPSTLVLFILRKLPP***********
Disordered Region (DISOPRED)
****TPVVASNWWHDVNESPLWQDRIFHVLAALYGLVAAVALVQLIRIQLRVPEYGWTTQKVFHFLNFIVNAVRCVVFVFRRDVQKLQPDIVRHIVLDMPSLAFFTTYALLVLFWAEIYYQARAVSTDGLRPSFFTVNAVVYIVQIALWLVLCWKPIPVIIILSKMFFAAVSLFAALGFLLYGGRLFL******************VGYVTTICFTCFLVRCIMMCFNAFDKAADLDVLDHPVLNFIYYLLVEILPSTLVLFIL****************
Disordered Region (DISEMBL)
MDVATPVVASNWWHDVNESPLWQDRIFHVLAALYGLVAAVALVQLIRIQLRVPEYGWTTQKVFHFLNFIVNAVRCVVFVFRRDVQKLQPDIVRHIVLDMPSLAFFTTYALLVLFWAEIYYQARAVSTDGLRPSFFTVNAVVYIVQIALWLVLCWKPIPVIIILSKMFFAAVSLFAALGFLLYGGRLFLMLQRFPVESKGRRKKLQEVGYVTTICFTCFLVRCIMMCFNAFDKAADLDVLDHPVLNFIYYLLVEILPSTLVLFILRKLPPKRGITQYHPIR
Disordered Region (DISPRO)
*DVATPVVASNWWHDVNESPLWQDRIFHVLAALYGLVAAVALVQLIRIQLRVPEYGWTTQKVFHFLNFIVNAVRCVVFVFRRDVQKLQPDIVRHIVLDMPSLAFFTTYALLVLFWAEIYYQARAVSTDGLRPSFFTVNAVVYIVQIALWLVLCWKPIPVIIILSKMFFAAVSLFAALGFLLYGGRLFLMLQRFPVESKGRRKKLQEVGYVTTICFTCFLVRCIMMCFNAFDKAADLDVLDHPVLNFIYYLLVEILPSTLVLFILRKLPPKRG********
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MDVATPVVASNWWHDVNESPLWQDRIFHVLAALYGLVAAVALVQLIRIQLRVPEYGWTTQKVFHFLNFIVNAVRCVVFVFRRDVQKLQPDIVRHIVLDMPSLAFFTTYALLVLFWAEIYYQARAVSTDGLRPSFFTVNAVVYIVQIALWLVLCWKPIPVIIILSKMFFAAVSLFAALGFLLYGGRLFLMLQRFPVESKGRRKKLQEVGYVTTICFTCFLVRCIMMCFNAFDKAADLDVLDHPVLNFIYYLLVEILPSTLVLFILRKLPPKRGITQYHPIR
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	280
356512251	293	PREDICTED: uncharacterized protein LOC10	0.971	0.928	0.893	1e-143
255641027	293	unknown [Glycine max]	0.971	0.928	0.889	1e-143
388509508	297	unknown [Lotus japonicus]	0.971	0.915	0.886	1e-142
356525012	293	PREDICTED: uncharacterized protein LOC10	0.971	0.928	0.882	1e-141
224111358	293	predicted protein [Populus trichocarpa]	0.971	0.928	0.882	1e-141
217072804	294	unknown [Medicago truncatula]	0.971	0.925	0.875	1e-141
225425118	290	PREDICTED: uncharacterized protein LOC10	0.971	0.937	0.875	1e-140
255646606	293	unknown [Glycine max]	0.971	0.928	0.878	1e-140
224099665	284	predicted protein [Populus trichocarpa]	0.971	0.957	0.863	1e-139
18395323	303	tobamovirus multiplication protein 3 [Ar	0.971	0.897	0.867	1e-139

>gi|356512251|ref|XP_003524834.1| PREDICTED: uncharacterized protein LOC100811134 [Glycine max]

 Score =  514 bits (1324), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 243/272 (89%), Positives = 262/272 (96%)

Query: 9   ASNWWHDVNESPLWQDRIFHVLAALYGLVAAVALVQLIRIQLRVPEYGWTTQKVFHFLNF 68
           +SNWW D+N SPLWQDRIFH+LA LYG+VAAVALVQL+RIQLRVPEYGWTTQKVFHFLNF
Sbjct: 22  SSNWWRDINRSPLWQDRIFHLLAILYGIVAAVALVQLVRIQLRVPEYGWTTQKVFHFLNF 81

Query: 69  IVNAVRCVVFVFRRDVQKLQPDIVRHIVLDMPSLAFFTTYALLVLFWAEIYYQARAVSTD 128
           IVN VRC VFVFRRDVQKLQP+IV+HI+LDMPSLAFFTTYALLVLFWAEIYYQARAVSTD
Sbjct: 82  IVNGVRCFVFVFRRDVQKLQPEIVQHILLDMPSLAFFTTYALLVLFWAEIYYQARAVSTD 141

Query: 129 GLRPSFFTVNAVVYIVQIALWLVLCWKPIPVIIILSKMFFAAVSLFAALGFLLYGGRLFL 188
           GLRPSF+T+NAVVY++QI LWL+L WKPI V++ILSKMFFA VSLFAALGFLLYGGRLFL
Sbjct: 142 GLRPSFYTINAVVYVIQITLWLILWWKPISVLVILSKMFFAGVSLFAALGFLLYGGRLFL 201

Query: 189 MLQRFPVESKGRRKKLQEVGYVTTICFTCFLVRCIMMCFNAFDKAADLDVLDHPVLNFIY 248
           MLQRFPVESKGRRKKLQEVGYVTTICF+CFL+RC+MMCFNAFDKAADLDVLDHP+LNFIY
Sbjct: 202 MLQRFPVESKGRRKKLQEVGYVTTICFSCFLIRCVMMCFNAFDKAADLDVLDHPILNFIY 261

Query: 249 YLLVEILPSTLVLFILRKLPPKRGITQYHPIR 280
           YL VEILPSTLVLFILRKLPPKRGITQYHPIR
Sbjct: 262 YLFVEILPSTLVLFILRKLPPKRGITQYHPIR 293

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255641027|gb|ACU20793.1| unknown [Glycine max]

 Score =  512 bits (1319), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 242/272 (88%), Positives = 262/272 (96%)

Query: 9   ASNWWHDVNESPLWQDRIFHVLAALYGLVAAVALVQLIRIQLRVPEYGWTTQKVFHFLNF 68
           +SNWW D++ SPLWQDRIFH+LA LYG+VAAVALVQL+RIQLRVPEYGWTTQKVFHFLNF
Sbjct: 22  SSNWWRDIDRSPLWQDRIFHLLAILYGIVAAVALVQLVRIQLRVPEYGWTTQKVFHFLNF 81

Query: 69  IVNAVRCVVFVFRRDVQKLQPDIVRHIVLDMPSLAFFTTYALLVLFWAEIYYQARAVSTD 128
           IVN VRC VFVFRRDVQKLQP+IV+HI+LDMPSLAFFTTYALLVLFWAEIYYQARAVSTD
Sbjct: 82  IVNGVRCFVFVFRRDVQKLQPEIVQHILLDMPSLAFFTTYALLVLFWAEIYYQARAVSTD 141

Query: 129 GLRPSFFTVNAVVYIVQIALWLVLCWKPIPVIIILSKMFFAAVSLFAALGFLLYGGRLFL 188
           GLRPSF+T+NAVVY++QI LWL+L WKPI V++ILSKMFFA VSLFAALGFLLYGGRLFL
Sbjct: 142 GLRPSFYTINAVVYVIQITLWLILWWKPISVLVILSKMFFAGVSLFAALGFLLYGGRLFL 201

Query: 189 MLQRFPVESKGRRKKLQEVGYVTTICFTCFLVRCIMMCFNAFDKAADLDVLDHPVLNFIY 248
           MLQRFPVESKGRRKKLQEVGYVTTICF+CFL+RC+MMCFNAFDKAADLDVLDHP+LNFIY
Sbjct: 202 MLQRFPVESKGRRKKLQEVGYVTTICFSCFLIRCVMMCFNAFDKAADLDVLDHPILNFIY 261

Query: 249 YLLVEILPSTLVLFILRKLPPKRGITQYHPIR 280
           YL VEILPSTLVLFILRKLPPKRGITQYHPIR
Sbjct: 262 YLFVEILPSTLVLFILRKLPPKRGITQYHPIR 293

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388509508|gb|AFK42820.1| unknown [Lotus japonicus]

 Score =  511 bits (1317), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 241/272 (88%), Positives = 261/272 (95%)

Query: 9   ASNWWHDVNESPLWQDRIFHVLAALYGLVAAVALVQLIRIQLRVPEYGWTTQKVFHFLNF 68
           +SNWW D+N SPLWQDRIFHVLA LYG+VAA+ALVQL+RIQLRVPEYGWTTQKVFHFLNF
Sbjct: 26  SSNWWRDINNSPLWQDRIFHVLAVLYGIVAAIALVQLVRIQLRVPEYGWTTQKVFHFLNF 85

Query: 69  IVNAVRCVVFVFRRDVQKLQPDIVRHIVLDMPSLAFFTTYALLVLFWAEIYYQARAVSTD 128
            VN VRC VFVFRRDVQKLQP+IV+HI+LDMPSLAFFTTYALLVLFWAEIYYQARAVSTD
Sbjct: 86  FVNGVRCFVFVFRRDVQKLQPEIVQHILLDMPSLAFFTTYALLVLFWAEIYYQARAVSTD 145

Query: 129 GLRPSFFTVNAVVYIVQIALWLVLCWKPIPVIIILSKMFFAAVSLFAALGFLLYGGRLFL 188
           GLRPSF+T+N VVY+VQI LWL+L WKPI V++ILSKMFFA VSLFAALGFLLYGGRLFL
Sbjct: 146 GLRPSFYTINTVVYVVQIVLWLILWWKPISVLVILSKMFFAGVSLFAALGFLLYGGRLFL 205

Query: 189 MLQRFPVESKGRRKKLQEVGYVTTICFTCFLVRCIMMCFNAFDKAADLDVLDHPVLNFIY 248
           MLQRFPVESKGRRKKLQEVGYVTTICF+CFL+RC+MMCF+AFDKAADLDVLDHP+LNFIY
Sbjct: 206 MLQRFPVESKGRRKKLQEVGYVTTICFSCFLIRCVMMCFDAFDKAADLDVLDHPILNFIY 265

Query: 249 YLLVEILPSTLVLFILRKLPPKRGITQYHPIR 280
           YLLVEILPS+LVLFILRKLPPKRGITQYHPIR
Sbjct: 266 YLLVEILPSSLVLFILRKLPPKRGITQYHPIR 297

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356525012|ref|XP_003531121.1| PREDICTED: uncharacterized protein LOC100781243 [Glycine max]

 Score =  508 bits (1307), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 240/272 (88%), Positives = 261/272 (95%)

Query: 9   ASNWWHDVNESPLWQDRIFHVLAALYGLVAAVALVQLIRIQLRVPEYGWTTQKVFHFLNF 68
           +SNWW D+N SPLWQDRIFH+L+ LYG+VAAVALVQL+RIQ RVPEYGWTTQKVFHFLNF
Sbjct: 22  SSNWWRDINRSPLWQDRIFHLLSILYGIVAAVALVQLVRIQWRVPEYGWTTQKVFHFLNF 81

Query: 69  IVNAVRCVVFVFRRDVQKLQPDIVRHIVLDMPSLAFFTTYALLVLFWAEIYYQARAVSTD 128
           IVN VRC VFVFRRDVQKLQP+IV+HI+LDMPSLAFFTTYALLVLFWAEIYYQARAVSTD
Sbjct: 82  IVNGVRCFVFVFRRDVQKLQPEIVQHILLDMPSLAFFTTYALLVLFWAEIYYQARAVSTD 141

Query: 129 GLRPSFFTVNAVVYIVQIALWLVLCWKPIPVIIILSKMFFAAVSLFAALGFLLYGGRLFL 188
           GLRPSF+T+NAVVY++QI LWL+L WKPI V++ILSKMFFA VSLFAALGFLLYGGRLFL
Sbjct: 142 GLRPSFYTINAVVYVIQITLWLILWWKPISVLVILSKMFFAGVSLFAALGFLLYGGRLFL 201

Query: 189 MLQRFPVESKGRRKKLQEVGYVTTICFTCFLVRCIMMCFNAFDKAADLDVLDHPVLNFIY 248
           MLQRFPVESKGRRKKLQEVGYVTTICF+CFL+RC+MMCFNAFDKAADLDVL HP+LNF+Y
Sbjct: 202 MLQRFPVESKGRRKKLQEVGYVTTICFSCFLIRCVMMCFNAFDKAADLDVLYHPILNFMY 261

Query: 249 YLLVEILPSTLVLFILRKLPPKRGITQYHPIR 280
           YLLVEILPSTLVLFILRKLPPKRGITQYHPIR
Sbjct: 262 YLLVEILPSTLVLFILRKLPPKRGITQYHPIR 293

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224111358|ref|XP_002315824.1| predicted protein [Populus trichocarpa] gi|222864864|gb|EEF01995.1| predicted protein [Populus trichocarpa]

 Score =  507 bits (1306), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 240/272 (88%), Positives = 258/272 (94%)

Query: 9   ASNWWHDVNESPLWQDRIFHVLAALYGLVAAVALVQLIRIQLRVPEYGWTTQKVFHFLNF 68
           AS+WWHD+NESP WQDRIFHVLAALYGLVAAVA +QLIRIQLRVPEYGWTTQKVFHFLNF
Sbjct: 22  ASSWWHDINESPFWQDRIFHVLAALYGLVAAVAFIQLIRIQLRVPEYGWTTQKVFHFLNF 81

Query: 69  IVNAVRCVVFVFRRDVQKLQPDIVRHIVLDMPSLAFFTTYALLVLFWAEIYYQARAVSTD 128
           +VN VRC++FVFRR+V+ + P I +HI+LD PSLAFFTTYALLVLFWAEIYYQARAVSTD
Sbjct: 82  LVNGVRCLLFVFRRNVESIHPPIFQHILLDFPSLAFFTTYALLVLFWAEIYYQARAVSTD 141

Query: 129 GLRPSFFTVNAVVYIVQIALWLVLCWKPIPVIIILSKMFFAAVSLFAALGFLLYGGRLFL 188
           GLRPSFFT+NAVVY +QIA+WLVL WK IP + ILSK+FFA VSLFAALGFLLYGGRLFL
Sbjct: 142 GLRPSFFTINAVVYTIQIAMWLVLAWKTIPTVAILSKVFFAGVSLFAALGFLLYGGRLFL 201

Query: 189 MLQRFPVESKGRRKKLQEVGYVTTICFTCFLVRCIMMCFNAFDKAADLDVLDHPVLNFIY 248
           MLQRFPVESKGRRKKLQEVGYVTTICF+CFLVRCIMMCFNAFDKAADLDVLDHPVLNFIY
Sbjct: 202 MLQRFPVESKGRRKKLQEVGYVTTICFSCFLVRCIMMCFNAFDKAADLDVLDHPVLNFIY 261

Query: 249 YLLVEILPSTLVLFILRKLPPKRGITQYHPIR 280
           YLLVEILPS+LVLFILRKLPPKRGITQYHPIR
Sbjct: 262 YLLVEILPSSLVLFILRKLPPKRGITQYHPIR 293

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|217072804|gb|ACJ84762.1| unknown [Medicago truncatula]

 Score =  506 bits (1303), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 238/272 (87%), Positives = 259/272 (95%)

Query: 9   ASNWWHDVNESPLWQDRIFHVLAALYGLVAAVALVQLIRIQLRVPEYGWTTQKVFHFLNF 68
            SNWW D+N SPLWQDRIFH+LA LYG+VA +ALVQL RIQLRVPEYGWTTQKVFHFLNF
Sbjct: 23  TSNWWRDINNSPLWQDRIFHLLAILYGIVAVIALVQLARIQLRVPEYGWTTQKVFHFLNF 82

Query: 69  IVNAVRCVVFVFRRDVQKLQPDIVRHIVLDMPSLAFFTTYALLVLFWAEIYYQARAVSTD 128
            VN VRC VFVFRRDVQKLQP+IV+HI+LDMPSLAFFTTYALLVLFWAEIYYQARAVSTD
Sbjct: 83  FVNGVRCFVFVFRRDVQKLQPEIVQHILLDMPSLAFFTTYALLVLFWAEIYYQARAVSTD 142

Query: 129 GLRPSFFTVNAVVYIVQIALWLVLCWKPIPVIIILSKMFFAAVSLFAALGFLLYGGRLFL 188
           GLRPSF+T+NAVVY++QIALWL+L WKP+ +++ILSKMFFA VSLFAALGFLLYGGRLFL
Sbjct: 143 GLRPSFYTINAVVYVIQIALWLILWWKPVRMLVILSKMFFAGVSLFAALGFLLYGGRLFL 202

Query: 189 MLQRFPVESKGRRKKLQEVGYVTTICFTCFLVRCIMMCFNAFDKAADLDVLDHPVLNFIY 248
           MLQRFPVESKGRRKKLQEVGYVTTICF+CFL+RC+MMCFNAFDKAADLDVLDHP+LN IY
Sbjct: 203 MLQRFPVESKGRRKKLQEVGYVTTICFSCFLIRCVMMCFNAFDKAADLDVLDHPILNLIY 262

Query: 249 YLLVEILPSTLVLFILRKLPPKRGITQYHPIR 280
           YLLVEILPS+LVLFILRKLPPKRGITQYHPIR
Sbjct: 263 YLLVEILPSSLVLFILRKLPPKRGITQYHPIR 294

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225425118|ref|XP_002275179.1| PREDICTED: uncharacterized protein LOC100266794 isoform 1 [Vitis vinifera] gi|297738282|emb|CBI27483.3| unnamed protein product [Vitis vinifera]

 Score =  504 bits (1298), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 238/272 (87%), Positives = 261/272 (95%)

Query: 9   ASNWWHDVNESPLWQDRIFHVLAALYGLVAAVALVQLIRIQLRVPEYGWTTQKVFHFLNF 68
           ASNWW +VN S +WQDRIFHVLAALYG+VAAVALVQL+RIQLRVPEYGWTTQKVFHFLNF
Sbjct: 19  ASNWWEEVNRSIVWQDRIFHVLAALYGIVAAVALVQLVRIQLRVPEYGWTTQKVFHFLNF 78

Query: 69  IVNAVRCVVFVFRRDVQKLQPDIVRHIVLDMPSLAFFTTYALLVLFWAEIYYQARAVSTD 128
           +VN VR +VFVFRR+VQ+L P+I++HI+LDMPSLAFFTTYALLVLFWAEIYYQARAVSTD
Sbjct: 79  LVNGVRSLVFVFRRNVQRLHPEIIQHILLDMPSLAFFTTYALLVLFWAEIYYQARAVSTD 138

Query: 129 GLRPSFFTVNAVVYIVQIALWLVLCWKPIPVIIILSKMFFAAVSLFAALGFLLYGGRLFL 188
           GLRPSF+T+NAVVY +QIA+W VL WKPIP++ ILSKMFFA VSLFAALGFLLYGGRLFL
Sbjct: 139 GLRPSFYTINAVVYAIQIAMWFVLWWKPIPIVFILSKMFFAGVSLFAALGFLLYGGRLFL 198

Query: 189 MLQRFPVESKGRRKKLQEVGYVTTICFTCFLVRCIMMCFNAFDKAADLDVLDHPVLNFIY 248
           MLQRFPVESKGRRKKLQEVGYVTTICF+CFLVRCIMMCFNAFD+AA+LDVLDHP+LNFIY
Sbjct: 199 MLQRFPVESKGRRKKLQEVGYVTTICFSCFLVRCIMMCFNAFDQAANLDVLDHPILNFIY 258

Query: 249 YLLVEILPSTLVLFILRKLPPKRGITQYHPIR 280
           YLLVEILPS+LVLFILRKLPPKRGITQYHPIR
Sbjct: 259 YLLVEILPSSLVLFILRKLPPKRGITQYHPIR 290

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255646606|gb|ACU23777.1| unknown [Glycine max]

 Score =  504 bits (1297), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 239/272 (87%), Positives = 260/272 (95%)

Query: 9   ASNWWHDVNESPLWQDRIFHVLAALYGLVAAVALVQLIRIQLRVPEYGWTTQKVFHFLNF 68
           +SNWW D+N SPLWQDRIFH+L+ LYG+VAAVALVQL+RIQ RVPEYGWTTQKVFHFLNF
Sbjct: 22  SSNWWRDINRSPLWQDRIFHLLSILYGIVAAVALVQLVRIQWRVPEYGWTTQKVFHFLNF 81

Query: 69  IVNAVRCVVFVFRRDVQKLQPDIVRHIVLDMPSLAFFTTYALLVLFWAEIYYQARAVSTD 128
           IVN VRC VFVFRRDVQKLQP+IV+HI+LDMPSLAFFTTYALLVLFWAEIYYQARAVSTD
Sbjct: 82  IVNGVRCFVFVFRRDVQKLQPEIVQHILLDMPSLAFFTTYALLVLFWAEIYYQARAVSTD 141

Query: 129 GLRPSFFTVNAVVYIVQIALWLVLCWKPIPVIIILSKMFFAAVSLFAALGFLLYGGRLFL 188
           GLR SF+T+NAVVY++QI LWL+L WKPI V++ILSKMFFA VSLFAALGFLLYGGRLFL
Sbjct: 142 GLRLSFYTINAVVYVIQITLWLILWWKPISVLVILSKMFFAGVSLFAALGFLLYGGRLFL 201

Query: 189 MLQRFPVESKGRRKKLQEVGYVTTICFTCFLVRCIMMCFNAFDKAADLDVLDHPVLNFIY 248
           MLQRFPVESKGRRKKLQEVGYVTTICF+CFL+RC+MMCFNAFDKAADLDVL HP+LNF+Y
Sbjct: 202 MLQRFPVESKGRRKKLQEVGYVTTICFSCFLIRCVMMCFNAFDKAADLDVLYHPILNFMY 261

Query: 249 YLLVEILPSTLVLFILRKLPPKRGITQYHPIR 280
           YLLVEILPSTLVLFILRKLPPKRGITQYHPIR
Sbjct: 262 YLLVEILPSTLVLFILRKLPPKRGITQYHPIR 293

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224099665|ref|XP_002311570.1| predicted protein [Populus trichocarpa] gi|222851390|gb|EEE88937.1| predicted protein [Populus trichocarpa]

 Score =  501 bits (1289), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 235/272 (86%), Positives = 257/272 (94%)

Query: 9   ASNWWHDVNESPLWQDRIFHVLAALYGLVAAVALVQLIRIQLRVPEYGWTTQKVFHFLNF 68
           AS+WW D+NESP+WQDR FHVLAALYGLVAAVAL+QLIRIQLRVPEYGWTTQKVFHFLNF
Sbjct: 13  ASSWWQDINESPVWQDRTFHVLAALYGLVAAVALIQLIRIQLRVPEYGWTTQKVFHFLNF 72

Query: 69  IVNAVRCVVFVFRRDVQKLQPDIVRHIVLDMPSLAFFTTYALLVLFWAEIYYQARAVSTD 128
           +VN  RC++FVFRR+++ + P I +HI+LD PSLAFFTTYALLVLFWAEIYYQARA+STD
Sbjct: 73  LVNGARCLLFVFRRNIESIHPSIFQHILLDSPSLAFFTTYALLVLFWAEIYYQARAISTD 132

Query: 129 GLRPSFFTVNAVVYIVQIALWLVLCWKPIPVIIILSKMFFAAVSLFAALGFLLYGGRLFL 188
           GLRPSFFT+NAVVY +QIA+WLVL WK +P+ +ILSKMFFA VSLFAALGFLLYGGRLFL
Sbjct: 133 GLRPSFFTINAVVYAIQIAMWLVLAWKTVPIAVILSKMFFAGVSLFAALGFLLYGGRLFL 192

Query: 189 MLQRFPVESKGRRKKLQEVGYVTTICFTCFLVRCIMMCFNAFDKAADLDVLDHPVLNFIY 248
           ML+RFPVESKGRRKKLQEVGYVTTICF CFLVRCIM+CFNAFDKAADLDVLDHPVLNFIY
Sbjct: 193 MLRRFPVESKGRRKKLQEVGYVTTICFLCFLVRCIMICFNAFDKAADLDVLDHPVLNFIY 252

Query: 249 YLLVEILPSTLVLFILRKLPPKRGITQYHPIR 280
           YLLVEILPSTLVLFILRKLPPKRGITQYHPIR
Sbjct: 253 YLLVEILPSTLVLFILRKLPPKRGITQYHPIR 284

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|18395323|ref|NP_027422.1| tobamovirus multiplication protein 3 [Arabidopsis thaliana] gi|15425641|dbj|BAB64308.1| TOM3 [Arabidopsis thaliana] gi|20197487|gb|AAC97216.2| expressed protein [Arabidopsis thaliana] gi|26449544|dbj|BAC41898.1| unknown protein [Arabidopsis thaliana] gi|330250463|gb|AEC05557.1| tobamovirus multiplication protein 3 [Arabidopsis thaliana]

 Score =  500 bits (1287), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 236/272 (86%), Positives = 260/272 (95%)

Query: 9   ASNWWHDVNESPLWQDRIFHVLAALYGLVAAVALVQLIRIQLRVPEYGWTTQKVFHFLNF 68
           ASNWW DVNESP+WQDRIFHVLA LYG+V+ VA++QL+RIQLRVPEYGWTTQKVFHFLNF
Sbjct: 32  ASNWWSDVNESPIWQDRIFHVLAVLYGIVSLVAVIQLVRIQLRVPEYGWTTQKVFHFLNF 91

Query: 69  IVNAVRCVVFVFRRDVQKLQPDIVRHIVLDMPSLAFFTTYALLVLFWAEIYYQARAVSTD 128
           +VN VR VVFVFRR+VQ +QP+I++HI+LD+PSLAFFTTYALLVLFWAEIYYQARAVSTD
Sbjct: 92  VVNGVRAVVFVFRRNVQFMQPEILQHILLDIPSLAFFTTYALLVLFWAEIYYQARAVSTD 151

Query: 129 GLRPSFFTVNAVVYIVQIALWLVLCWKPIPVIIILSKMFFAAVSLFAALGFLLYGGRLFL 188
           GLRPSFFT+NAVVY+VQIALWLVL WKP+ V++ILSKMFFA VSLFAALGFLLYGGRLFL
Sbjct: 152 GLRPSFFTINAVVYVVQIALWLVLWWKPVRVMVILSKMFFAGVSLFAALGFLLYGGRLFL 211

Query: 189 MLQRFPVESKGRRKKLQEVGYVTTICFTCFLVRCIMMCFNAFDKAADLDVLDHPVLNFIY 248
           MLQRFPVESKGRRKKLQEVGYVTTICFTCFL+RCIMMCF AFD+ A+LDVLDHP+LNFIY
Sbjct: 212 MLQRFPVESKGRRKKLQEVGYVTTICFTCFLIRCIMMCFAAFDEGANLDVLDHPILNFIY 271

Query: 249 YLLVEILPSTLVLFILRKLPPKRGITQYHPIR 280
           YLLVEILPS+LVLFILRKLPPKRGITQYH IR
Sbjct: 272 YLLVEILPSSLVLFILRKLPPKRGITQYHQIR 303

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	280
TAIR|locus:2051663	303	TOM3 "tobamovirus multiplicati	0.971	0.897	0.713	6e-103
TAIR|locus:2012552	293	THH1 "TOM THREE HOMOLOG 1" [Ar	0.964	0.921	0.703	2.6e-102
TAIR|locus:2119088	291	TOM1 "AT4G21790" [Arabidopsis	0.989	0.951	0.489	6.3e-69
DICTYBASE|DDB_G0284443	287	DDB_G0284443 [Dictyostelium di	0.589	0.574	0.253	7.8e-05
TAIR|locus:2077705	373	Cand3 "candidate G-protein Cou	0.282	0.211	0.259	9.5e-05

TAIR|locus:2051663 TOM3 "tobamovirus multiplication protein 3" [Arabidopsis thaliana (taxid:3702)]

 Score = 1020 (364.1 bits), Expect = 6.0e-103, P = 6.0e-103
 Identities = 194/272 (71%), Positives = 212/272 (77%)

Query:     9 ASNWWHDVNESPLWQDRIFHXXXXXXXXXXXXXXXXXIRIQLRVPEYGWTTQKVFHFLNX 68
             ASNWW DVNESP+WQDRIFH                 +RIQLRVPEYGWTTQKVFHFLN 
Sbjct:    32 ASNWWSDVNESPIWQDRIFHVLAVLYGIVSLVAVIQLVRIQLRVPEYGWTTQKVFHFLNF 91

Query:    69 XXXXXXXXXXXXXXXXQKLQPDIVRHIVLDMPSLAFFTTYALLVLFWAEIYYQARAVSTD 128
                             Q +QP+I++HI+LD+PSLAFFTTYALLVLFWAEIYYQARAVSTD
Sbjct:    92 VVNGVRAVVFVFRRNVQFMQPEILQHILLDIPSLAFFTTYALLVLFWAEIYYQARAVSTD 151

Query:   129 GLRPSFFTVNAVVYIVQIALWLVLCWKPIPVIIILSKMFFAAVSXXXXXXXXXXXXXXXX 188
             GLRPSFFT+NAVVY+VQIALWLVL WKP+ V++ILSKMFFA VS                
Sbjct:   152 GLRPSFFTINAVVYVVQIALWLVLWWKPVRVMVILSKMFFAGVSLFAALGFLLYGGRLFL 211

Query:   189 XXQRFPVESKGRRKKLQEVGYVTTICFTCFLVRCIMMCFNAFDKAADLDVLDHPVLNFIY 248
               QRFPVESKGRRKKLQEVGYVTTICFTCFL+RCIMMCF AFD+ A+LDVLDHP+LNFIY
Sbjct:   212 MLQRFPVESKGRRKKLQEVGYVTTICFTCFLIRCIMMCFAAFDEGANLDVLDHPILNFIY 271

Query:   249 YLLVEILPSTLVLFILRKLPPKRGITQYHPIR 280
             YLLVEILPS+LVLFILRKLPPKRGITQYH IR
Sbjct:   272 YLLVEILPSSLVLFILRKLPPKRGITQYHQIR 303

GO:0005739 "mitochondrion" evidence=ISM

GO:0046786 "viral replication complex formation and maintenance" evidence=IMP

TAIR|locus:2012552 THH1 "TOM THREE HOMOLOG 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 1014 (362.0 bits), Expect = 2.6e-102, P = 2.6e-102
 Identities = 190/270 (70%), Positives = 211/270 (78%)

Query:    11 NWWHDVNESPLWQDRIFHXXXXXXXXXXXXXXXXXIRIQLRVPEYGWTTQKVFHFLNXXX 70
             NWW DVNESP+WQDRIFH                 +RIQLRVPEYGWTTQKVFHFLN   
Sbjct:    24 NWWWDVNESPVWQDRIFHVLAVLYGIVSVIAVIQLVRIQLRVPEYGWTTQKVFHFLNFMV 83

Query:    71 XXXXXXXXXXXXXXQKLQPDIVRHIVLDMPSLAFFTTYALLVLFWAEIYYQARAVSTDGL 130
                           Q +QP+I++HI+LD+PSLAFFTTYALLVLFWAEIYYQARAVSTDGL
Sbjct:    84 NGVRALVFLFRRDAQNMQPEILQHILLDIPSLAFFTTYALLVLFWAEIYYQARAVSTDGL 143

Query:   131 RPSFFTVNAVVYIVQIALWLVLCWKPIPVIIILSKMFFAAVSXXXXXXXXXXXXXXXXXX 190
             RPSFFT+NAVVY++QIALWLVL WKP+ +++I+SKMFFA VS                  
Sbjct:   144 RPSFFTINAVVYVIQIALWLVLWWKPVHLMVIISKMFFAGVSLFAALGFLLYGGRLFLML 203

Query:   191 QRFPVESKGRRKKLQEVGYVTTICFTCFLVRCIMMCFNAFDKAADLDVLDHPVLNFIYYL 250
             QRFPVESKGRRKKLQEVGYVTTICFTCFL+RCIMMCF+AFD AADLDVLDHP+LNFIYYL
Sbjct:   204 QRFPVESKGRRKKLQEVGYVTTICFTCFLIRCIMMCFDAFDDAADLDVLDHPILNFIYYL 263

Query:   251 LVEILPSTLVLFILRKLPPKRGITQYHPIR 280
             LVEILPS+LVLFILRKLPPKRGITQYH I+
Sbjct:   264 LVEILPSSLVLFILRKLPPKRGITQYHQIQ 293

GO:0005739 "mitochondrion" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0046790 "virion binding" evidence=IPI

TAIR|locus:2119088 TOM1 "AT4G21790" [Arabidopsis thaliana (taxid:3702)]

 Score = 699 (251.1 bits), Expect = 6.3e-69, P = 6.3e-69
 Identities = 136/278 (48%), Positives = 170/278 (61%)

Query:     3 VATPVVASNWWHDVNESPLWQDRIFHXXXXXXXXXXXXXXXXXIRIQLRVPEYGWTTQKV 62
             + T  + S WW DVNES  WQD IF                  IRIQ+RVPEYGWTTQKV
Sbjct:    15 ILTTAITS-WWDDVNESTQWQDGIFFALCGAYALVSAVALVQLIRIQMRVPEYGWTTQKV 73

Query:    63 FHFLNXXXXXXXXXXXXXXXXXQKLQPDIVRHIVLDMPSLAFFTTYALLVLFWAEIYYQA 122
             FH +N                   + P  +  ++LD+P L FF+ Y LLVLFWAEIY+QA
Sbjct:    74 FHLMNFVVNGVRAVLFGFHMQVFLVHPKALCWVLLDLPGLLFFSAYTLLVLFWAEIYHQA 133

Query:   123 RAVSTDGLRPSFFTVNAVVYIVQIALWLVLCWKPIPVIIILSKMFFAAVSXXXXXXXXXX 182
             R++ TD LR ++ +VN  VY+ QI +W  +       + ++ K+F A VS          
Sbjct:   134 RSLPTDKLRITYISVNVAVYLAQIGIWAYIWVHDNSTVELVGKIFIAVVSFIAALGFLLY 193

Query:   183 XXXXXXXXQRFPVESKGRRKKLQEVGYVTTICFTCFLVRCIMMCFNAFDKAADLDVLDHP 242
                     +RFP+ESKGRRKKL EVG VT ICFTCFL+RC+++  +AFDK   LDVLDHP
Sbjct:   194 GGRLFFMLRRFPIESKGRRKKLHEVGSVTAICFTCFLIRCVVVAVSAFDKDLTLDVLDHP 253

Query:   243 VLNFIYYLLVEILPSTLVLFILRKLPPKRGITQYHPIR 280
             VLN IYY++VE+LPS LVLFILRKLPPKR   QYHPI+
Sbjct:   254 VLNLIYYMVVEVLPSALVLFILRKLPPKRVSAQYHPIQ 291

GO:0005774 "vacuolar membrane" evidence=IDA

GO:0006914 "autophagy" evidence=RCA

GO:0046786 "viral replication complex formation and maintenance" evidence=IMP

DICTYBASE|DDB_G0284443 DDB_G0284443 [Dictyostelium discoideum (taxid:44689)]

 Score = 117 (46.2 bits), Expect = 7.8e-05, P = 7.8e-05
 Identities = 49/193 (25%), Positives = 88/193 (45%)

Query:    94 HIVLD-MPSLAFFTTYALLVLFWAEIY---YQARAVSTDGLRPSFFTVNA-VVYIVQIAL 148
             +++L+ +PS  FF+TY +++  W EIY   Y +   S   L P  F ++  ++YIV I L
Sbjct:    78 NVLLNTLPSFTFFSTYLIVLFIWVEIYMISYGSMMRSIKSL-PIIFNISTCIMYIVLIIL 136

Query:   149 WL------------VLCWKPIPVIII--LSKMFFAAVSXXXXXXXXXXXXXXXXXXQRFP 194
             ++            V  +  +P III       F   S                  + F 
Sbjct:   137 YILDFTLYKLDYSTVSTFTTLPEIIIGYYDVGCFILASFLFLFFGISLVVKFRHQQKNF- 195

Query:   195 VESKGRRKKLQEVGYVTTICFTCFLVRCIMMCFNAFDKAADLDVLDHPVLNF--IYYLLV 252
              E K R+  L+ + ++T +   CFL+R  + CF   D    L ++      F   Y+ ++
Sbjct:   196 AEDK-RKVILRRITFLTGLICCCFLLRAAITCFALID----LHLISGYWWWFDGAYFTVL 250

Query:   253 EILPSTLVLFILR 265
             EI+P +++L++L+
Sbjct:   251 EIVPLSIMLYLLQ 263

GO:0044351 "macropinocytosis" evidence=RCA

TAIR|locus:2077705 Cand3 "candidate G-protein Coupled Receptor 3" [Arabidopsis thaliana (taxid:3702)]

 Score = 80 (33.2 bits), Expect = 9.5e-05, Sum P(2) = 9.5e-05
 Identities = 21/81 (25%), Positives = 40/81 (49%)

Query:   202 KKLQEVGYVTTICFTCFLVRCIMMCFNAFD--KAADLDVLDHPVLNFIYYLLVEILPSTL 259
             +K+  +  V+ +CFT   +  ++     F     + L  +   VL  IYY +   +P   
Sbjct:   250 RKVSGLAGVSVVCFTVSSLIALLTHIPLFYHWNPSKLHGIKALVLLIIYYFIGSTVPLAF 309

Query:   260 VLFILRKLPPKRGITQYHPIR 280
             VL++LR+LPP+  +++    R
Sbjct:   310 VLWVLRELPPQNIVSRQEDTR 330

GO:0009507 "chloroplast" evidence=ISM

GO:0006635 "fatty acid beta-oxidation" evidence=RCA

GO:0016558 "protein import into peroxisome matrix" evidence=RCA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: estExt_fgenesh4_pg.C_LG_X0891 hypothetical protein (293 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	280
pfam06454	280	pfam06454, DUF1084, Protein of unknown function (D	1e-167

>gnl|CDD|191530 pfam06454, DUF1084, Protein of unknown function (DUF1084)

 Score =  463 bits (1192), Expect = e-167
 Identities = 199/280 (71%), Positives = 229/280 (81%)

Query: 1   MDVATPVVASNWWHDVNESPLWQDRIFHVLAALYGLVAAVALVQLIRIQLRVPEYGWTTQ 60
           M  ++     +WW DVNESP WQD IF+VLAALYGLV+ VAL+QLIRIQLRVPEYGWTTQ
Sbjct: 1   MSTSSAAGIPDWWDDVNESPEWQDGIFYVLAALYGLVSFVALIQLIRIQLRVPEYGWTTQ 60

Query: 61  KVFHFLNFIVNAVRCVVFVFRRDVQKLQPDIVRHIVLDMPSLAFFTTYALLVLFWAEIYY 120
           KVFH LNFIVN VR +VF FR+ V  L P I++HI+LD+P LAFFTTYALLVLFWAEIYY
Sbjct: 61  KVFHLLNFIVNGVRAIVFGFRKQVFNLHPKILQHILLDLPGLAFFTTYALLVLFWAEIYY 120

Query: 121 QARAVSTDGLRPSFFTVNAVVYIVQIALWLVLCWKPIPVIIILSKMFFAAVSLFAALGFL 180
           QAR + TD LRP+F+T+N VVY +QI +W+++   P   + I SK+FFA +S  AALGFL
Sbjct: 121 QARNLPTDKLRPAFYTINGVVYAIQIIIWILIWAGPNSAMEITSKIFFAVISFSAALGFL 180

Query: 181 LYGGRLFLMLQRFPVESKGRRKKLQEVGYVTTICFTCFLVRCIMMCFNAFDKAADLDVLD 240
           LYGGRLFLML+RFP+ESKGRRKKL EVG VT ICFTCFL+RC+M   +AFDK ADLDVLD
Sbjct: 181 LYGGRLFLMLRRFPIESKGRRKKLHEVGSVTAICFTCFLIRCVMFLVSAFDKKADLDVLD 240

Query: 241 HPVLNFIYYLLVEILPSTLVLFILRKLPPKRGITQYHPIR 280
           HP+LN IYYLLVEILPS LVLFILRKLPPKR   QYHPI 
Sbjct: 241 HPILNLIYYLLVEILPSALVLFILRKLPPKRASAQYHPIS 280

This family consists of several hypothetical plant specific proteins of unknown function. Length = 280

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	280
PF06454	281	DUF1084: Protein of unknown function (DUF1084); In	100.0

>PF06454 DUF1084: Protein of unknown function (DUF1084); InterPro: IPR009457 This entry consists of several hypothetical plant specific proteins of unknown function

Probab=100.00  E-value=1.6e-81  Score=579.64  Aligned_cols=280  Identities=60%  Similarity=1.105  Sum_probs=272.3

Q ss_pred             CCCcccccc-ccccchhcCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccchhhhhhHHHHhhhheeeEEE
Q 042673            1 MDVATPVVA-SNWWHDVNESPLWQDRIFHVLAALYGLVAAVALVQLIRIQLRVPEYGWTTQKVFHFLNFIVNAVRCVVFV   79 (280)
Q Consensus         1 ~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~La~iy~lv~~~a~~Qliri~~r~~~~g~t~qKvfhll~~l~~l~R~iyF~   79 (280)
                      |.-++|++. .|||+|+||||+||+|++|+||++|++++++|++|++|+++|.|++|||+||+||+++++++++|++||+
T Consensus         1 ~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~La~iy~~v~~~aliQl~ri~~r~~~~~~t~qkvf~ll~~l~~~~R~iyF~   80 (281)
T PF06454_consen    1 MPNSSAVAIANDWWNDVNESDKWQDGLFYALAAIYLLVALVALIQLIRIQYRVPKYGWTTQKVFHLLIFLANLVRAIYFF   80 (281)
T ss_pred             CCCccccccccchHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHhheeEeccccCccHHHHHHHHHHHHHHHHeEEEE
Confidence            556778887 8999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EecccccccchhhHHHHhhhhhHHHHHHHHHHHHHHHHHHHHhhcccCCCCccEEEeehhHHHHHHHhhhheeeeccchh
Q 042673           80 FRRDVQKLQPDIVRHIVLDMPSLAFFTTYALLVLFWAEIYYQARAVSTDGLRPSFFTVNAVVYIVQIALWLVLCWKPIPV  159 (280)
Q Consensus        80 ~~~~~~~~~~~v~~~iL~~lP~~lfFstytllllfWaeiy~~a~~~~~~~~~~~f~~iN~iiY~~~i~i~i~~~~~~~~~  159 (280)
                      +.++++..+|++++++|+++|+++|||+|+++++||+|+||++++..++++|+.+.++|+++|++++++|++.+.++.+.
T Consensus        81 ~~~~~~~~~~~~~~~iL~~lP~~lfFSty~llvlfWaeIy~~ar~~~~~~l~~~~~~iN~~iY~~~i~i~i~~~~~~~~~  160 (281)
T PF06454_consen   81 LLPSVFLIDPNVLDYILNDLPTFLFFSTYTLLVLFWAEIYYQARSVSTDKLRPIFIVINVVIYLFQIIIWILLFFSPSST  160 (281)
T ss_pred             EhHhhHhcChHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcccccchhhHHHHHHHHHHHHHHHHHhheecccchH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999998889


Q ss_pred             hHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccccceeEEEeeeehhhhhhHhHhhhhhhccccCCCCCCc
Q 042673          160 IIILSKMFFAAVSLFAALGFLLYGGRLFLMLQRFPVESKGRRKKLQEVGYVTTICFTCFLVRCIMMCFNAFDKAADLDVL  239 (280)
Q Consensus       160 ~~~~~~~~~a~isli~a~~F~~yG~~L~~~lr~~~~es~~~~kkl~~V~~vt~ic~~cF~~r~i~~~~~~~~~~~~~~~~  239 (280)
                      ++++++.++|++++++|+||++||+|+|.||||+|+|+++|+||++||+.+|++|++||++||+++++++++++.++|..
T Consensus       161 v~~i~~~~~A~isli~a~~Fl~YG~~L~~~Lr~~p~~s~~r~kkl~~V~~vt~ic~~cF~ir~i~~~~~~~~~~~~~d~~  240 (281)
T PF06454_consen  161 VSIIYAIFIAVISLIAALGFLYYGGKLFFKLRRFPIESKGRSKKLRKVGFVTIICSVCFLIRCIMVLFSAFDKPANLDVL  240 (281)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccccccHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhhccccccchh
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999888889999


Q ss_pred             chhHHHHHHHHHHHHHhHHHHHhhhccCCCCCCCCCCcCCC
Q 042673          240 DHPVLNFIYYLLVEILPSTLVLFILRKLPPKRGITQYHPIR  280 (280)
Q Consensus       240 ~~~~~~~iyy~i~EiiPs~lvLy~~r~~p~~~~~~~~~~~~  280 (280)
                      +|++++++||+++|++||+++||++||+||||.++|||||+
T Consensus       241 ~~~i~~~iyy~i~EivPs~lvL~~~r~lPp~~~~~~~~~~~  281 (281)
T PF06454_consen  241 SHPILNFIYYFITEIVPSALVLYILRKLPPKRASAQYHPIR  281 (281)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHhhCCCCcccccCCCCC
Confidence            99999999999999999999999999999999999999996

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00