Citrus Sinensis ID: 042753
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
ID ![]() | Alignment graph ![]() | Length ![]() |
Definition ![]() |
RBH(Q2H) ![]() |
RBH(H2Q) ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 473 | 2.2.26 [Sep-21-2011] | |||||||
| Q9C9B0 | 473 | UDP-glycosyltransferase 8 | yes | no | 0.955 | 0.955 | 0.502 | 1e-130 | |
| Q9LZD8 | 465 | UDP-glycosyltransferase 8 | no | no | 0.909 | 0.924 | 0.421 | 4e-94 | |
| Q9LNE6 | 435 | UDP-glycosyltransferase 8 | no | no | 0.858 | 0.933 | 0.372 | 6e-70 | |
| Q7Y232 | 484 | UDP-glycosyltransferase 7 | no | no | 0.953 | 0.931 | 0.320 | 3e-63 | |
| Q8VZE9 | 488 | UDP-glycosyltransferase 7 | no | no | 0.934 | 0.905 | 0.315 | 4e-62 | |
| Q9ZQG4 | 484 | UDP-glycosyltransferase 7 | no | no | 0.949 | 0.927 | 0.315 | 8e-62 | |
| Q8H0F2 | 482 | Anthocyanin 3'-O-beta-glu | N/A | no | 0.828 | 0.813 | 0.329 | 3e-61 | |
| Q9ZQ94 | 495 | UDP-glycosyltransferase 7 | no | no | 0.947 | 0.905 | 0.314 | 6e-60 | |
| Q9LXV0 | 488 | UDP-glycosyltransferase 9 | no | no | 0.928 | 0.899 | 0.326 | 2e-59 | |
| Q9ZQ97 | 496 | UDP-glycosyltransferase 7 | no | no | 0.940 | 0.897 | 0.319 | 2e-59 |
| >sp|Q9C9B0|U89B1_ARATH UDP-glycosyltransferase 89B1 OS=Arabidopsis thaliana GN=UGT89B1 PE=2 SV=2 | Back alignment and function desciption |
|---|
Score = 464 bits (1194), Expect = e-130, Method: Compositional matrix adjust.
Identities = 240/478 (50%), Positives = 318/478 (66%), Gaps = 26/478 (5%)
Query: 3 PAGAHILVYPFPTSGHIIPLLDLTNRLLTLG---LNVTVLITQNNLPLLDSLNANHPSTS 59
P H+L++PFP GH+IPLLD T+RL G L +TVL+T NLP L L + +
Sbjct: 10 PTKTHVLIFPFPAQGHMIPLLDFTHRLALRGGAALKITVLVTPKNLPFLSPLLS--AVVN 67
Query: 60 LQSLVLP---QPKWPAGS------PATRLLKFMRVLRELHYPALLDWFKSHPSPPVAILS 110
++ L+LP P P+G P + + L LH P L+ W SHPSPPVAI+S
Sbjct: 68 IEPLILPFPSHPSIPSGVENVQDLPPSGFPLMIHALGNLHAP-LISWITSHPSPPVAIVS 126
Query: 111 DFFLGWTQGLAAELGLPRVVFSPSGAFALSVSFAMWTDLPTNDDPDNVDALVSFPRVPNC 170
DFFLGWT+ LG+PR FSPS A + +W ++PT + D+ + ++ FP++PNC
Sbjct: 127 DFFLGWTK----NLGIPRFDFSPSAAITCCILNTLWIEMPTKINEDDDNEILHFPKIPNC 182
Query: 171 PVYPWYQISHLYRTLKEGDPDWDLHRSNMMANKTSWGIVFNSFAELERVYIDHMKKEMGH 230
P Y + QIS LYR+ GDP W+ R + N SWG+V NSF +E VY++H+K+EMGH
Sbjct: 183 PKYRFDQISSLYRSYVHGDPAWEFIRDSFRDNVASWGLVVNSFTAMEGVYLEHLKREMGH 242
Query: 231 DRVWAVGPVLPPDDDLVESMCRGGSSSVPAHDVLTWLDSRRDESVVYVCFGSRYVLTAKQ 290
DRVWAVGP++P D RGG +SV V++WLD+R D VVYVCFGS+ VLT +Q
Sbjct: 243 DRVWAVGPIIPLSGD-----NRGGPTSVSVDHVMSWLDAREDNHVVYVCFGSQVVLTKEQ 297
Query: 291 IHELAAALEKTDVDFVYCVREPDERHASQDCGVLPDGFEDRVAGRGYVIRGWSQQVAILR 350
LA+ LEK+ V F++ V+EP E+ +++ G + DGF+DRVAGRG VIRGW+ QVA+LR
Sbjct: 298 TLALASGLEKSGVHFIWAVKEPVEKDSTR--GNILDGFDDRVAGRGLVIRGWAPQVAVLR 355
Query: 351 HKAVGAFLTHCGWNSVLEGVSAGVVMLTWPMDADQYTNAQLLVDQLGVGIRVGEGTRNIP 410
H+AVGAFLTHCGWNSV+E V AGV+MLTWPM ADQYT+A L+VD+L VG+R EG +P
Sbjct: 356 HRAVGAFLTHCGWNSVVEAVVAGVLMLTWPMRADQYTDASLVVDELKVGVRACEGPDTVP 415
Query: 411 ESDELARLLAQSVDGPRRERLKARELSGAALSAVVKGGSSDRDLNDFIKRINELKSGK 468
+ DELAR+ A SV G + ER+KA EL AAL A+ + GSS DL+ FI+ + L K
Sbjct: 416 DPDELARVFADSVTGNQTERIKAVELRKAALDAIQERGSSVNDLDGFIQHVVSLGLNK 473
|
Possesses quercetin 3-O-glucosyltransferase, 7-O-glucosyltransferase and 4'-O-glucosyltransferase activities in vitro. Also active in vitro on benzoates and benzoate derivatives. Arabidopsis thaliana (taxid: 3702) EC: 2EC: .EC: 4EC: .EC: 1EC: .EC: 9EC: 1 |
| >sp|Q9LZD8|U89A2_ARATH UDP-glycosyltransferase 89A2 OS=Arabidopsis thaliana GN=UGT89A2 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 345 bits (885), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 200/475 (42%), Positives = 287/475 (60%), Gaps = 45/475 (9%)
Query: 7 HILVYPFPTSGHIIPLLDLTNRLLTLGLNVTVLITQNNLPLLDSLNANHPSTSLQSLVLP 66
HI+V+PFP GH++PLLDLT++L G NV+V++T NL L L + HPS S+ S+V P
Sbjct: 19 HIVVFPFPAQGHLLPLLDLTHQLCLRGFNVSVIVTPGNLTYLSPLLSAHPS-SVTSVVFP 77
Query: 67 QPKWPAGSPATRLLK---------FMRVLRELHYPALLDWFKSHPSPPVAILSDFFLGWT 117
P P+ SP +K M LR+L P +++WF+SHP+PP+A++SDFFLGWT
Sbjct: 78 FPPHPSLSPGVENVKDVGNSGNLPIMASLRQLREP-IINWFQSHPNPPIALISDFFLGWT 136
Query: 118 QGLAAELGLPRVVFSPSGAFALSV-SFAMWT-DLPTNDDPDNVDALVSFPRVPNCPVYPW 175
L ++G+PR F F +SV F DL + DP + L+ PR P
Sbjct: 137 HDLCNQIGIPRFAFFSISFFLVSVLQFCFENIDLIKSTDPIH---LLDLPRAP------I 187
Query: 176 YQISHL----YRTLKEGDPDWDLHRSNMMANKTSWGIVFNSFAELERVYIDHMKKEMGHD 231
++ HL R+L+ PD + + M N S+G VFNS LE Y+ ++K+ MGHD
Sbjct: 188 FKEEHLPSIVRRSLQTPSPDLESIKDFSM-NLLSYGSVFNSSEILEDDYLQYVKQRMGHD 246
Query: 232 RVWAVGPVLPPDDDLVESMCRGGSSSVPAHDVLTWLDSRRDESVVYVCFGSRYVLTAKQI 291
RV+ +GP+ + S + S SV +L+WLD + SV+YVCFGS+ LT Q
Sbjct: 247 RVYVIGPLCS-----IGSGLKSNSGSVDP-SLLSWLDGSPNGSVLYVCFGSQKALTKDQC 300
Query: 292 HELAAALEKTDVDFVYCVREPDERHASQDCGVLPDGFEDRVAGRGYVIRGWSQQVAILRH 351
LA LEK+ FV+ V++ +PDGFEDRV+GRG V+RGW Q+A+LRH
Sbjct: 301 DALALGLEKSMTRFVWVVKKDP----------IPDGFEDRVSGRGLVVRGWVSQLAVLRH 350
Query: 352 KAVGAFLTHCGWNSVLEGVSAGVVMLTWPMDADQYTNAQLLVDQLGVGIRVGEGTRNIPE 411
AVG FL+HCGWNSVLEG+++G V+L WPM+ADQ+ NA+LLV+ LGV +RV EG +P+
Sbjct: 351 VAVGGFLSHCGWNSVLEGITSGAVILGWPMEADQFVNARLLVEHLGVAVRVCEGGETVPD 410
Query: 412 SDELARLLAQSV-DGPRRERLKARELSGAALSAVVKG-GSSDRDLNDFIKRINEL 464
SDEL R++A+++ +G R +A E+ +AV + GSS ++ +K ++
Sbjct: 411 SDELGRVIAETMGEGGREVAARAEEIRRKTEAAVTEANGSSVENVQRLVKEFEKV 465
|
Glucosyltransferase that glucosylates benzoates and benzoate derivatives in vitro. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: - |
| >sp|Q9LNE6|U89C1_ARATH UDP-glycosyltransferase 89C1 OS=Arabidopsis thaliana GN=UGT89C1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 265 bits (677), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 176/473 (37%), Positives = 248/473 (52%), Gaps = 67/473 (14%)
Query: 7 HILVYPFPTSGHIIPLLDLTNRLLTLGLNVTVLITQNNLPLLDSLNANHPSTSLQSLVLP 66
H+LV PFP SGH++P LDLT+++L G VTVL+T N LD+L + H ++L+LP
Sbjct: 10 HVLVIPFPQSGHMVPHLDLTHQILLRGATVTVLVTPKNSSYLDALRSLHSPEHFKTLILP 69
Query: 67 QPKWPA---------GSPATRLLKFMRVLRELHYPALLDWFKSHPSP--PVAILSDFFLG 115
P P P ++ L LH P L+D+ P P AIL FL
Sbjct: 70 FPSHPCIPSGVESLQQLPLEAIVHMFDALSRLHDP-LVDFLSRQPPSDLPDAILGSSFLS 128
Query: 116 -WTQGLAAELGLPRVVFSPSGAFALSVSFAMWTDLPTNDDPDNVDALVSFPRVPNCPVYP 174
W +A + + F P A ++SV MW
Sbjct: 129 PWINKVADAFSIKSISFLPINAHSISV---MW---------------------------- 157
Query: 175 WYQISHLYRTLKEGDPDWDLHRSNMMANKTSWGIVFNSFAELERVYIDHMKKE-MGHDRV 233
D A S+G+V NSF +LE +++ +K + H R+
Sbjct: 158 -------------AQEDRSFFNDLETATTESYGLVINSFYDLEPEFVETVKTRFLNHHRI 204
Query: 234 WAVGPVLPPDDDLVESMCRGGSSSVPAHDVLTWLDS-RRDESVVYVCFGSRYVLTAKQIH 292
W VGP+LP + RGG SS+P V WLDS D SVVYV FGS+ LTA+Q
Sbjct: 205 WTVGPLLP----FKAGVDRGGQSSIPPAKVSAWLDSCPEDNSVVYVGFGSQIRLTAEQTA 260
Query: 293 ELAAALEKTDVDFVYCVREPDERHASQDCGV----LPDGFEDRVAGRGYVIRGWSQQVAI 348
LAAALEK+ V F++ VR+ ++ S D V +P GFE+RV +G VIRGW+ Q I
Sbjct: 261 ALAAALEKSSVRFIWAVRDAAKKVNSSDNSVEEDVIPAGFEERVKEKGLVIRGWAPQTMI 320
Query: 349 LRHKAVGAFLTHCGWNSVLEGVSAGVVMLTWPMDADQYTNAQLLVDQLGVGIRVGEGTRN 408
L H+AVG++LTH GW SVLEG+ GV++L WPM AD + N L+VD+L +RVGE +
Sbjct: 321 LEHRAVGSYLTHLGWGSVLEGMVGGVMLLAWPMQADHFFNTTLIVDKLRAAVRVGENRDS 380
Query: 409 IPESDELARLLAQSVDGPRRERLKARELSGAALSAVVKGGSSDRDLNDFIKRI 461
+P+SD+LAR+LA+S ER+ +L A+ A+ +GGSS ++L++ + +
Sbjct: 381 VPDSDKLARILAESAREDLPERVTLMKLREKAMEAIKEGGSSYKNLDELVAEM 433
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Flavonol 7-O-rhamnosyltransferase that acts on kaempferol 3-O-glucoside and other 3-O-glycosylated flavonols like quercetin 3-O-glucoside, quercetin 3-O-galactoside and isorhamnetin 3-O-glucoside. Shows a strict specificity for UDP-rhamnose as donor and does not act on flavonol aglycones or 3-O-glycosylated anthocyanins. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: - |
| >sp|Q7Y232|U73B4_ARATH UDP-glycosyltransferase 73B4 OS=Arabidopsis thaliana GN=UGT73B4 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 243 bits (619), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 156/486 (32%), Positives = 245/486 (50%), Gaps = 35/486 (7%)
Query: 7 HILVYPFPTSGHIIPLLDLTNRLLTLGLNVTVLITQNNLPLL----DSLNANHPSTSLQS 62
HIL +PF GH+IPLLD+ G T+L T N +L ++ +P +
Sbjct: 7 HILFFPFMAHGHMIPLLDMAKLFARRGAKSTLLTTPINAKILEKPIEAFKVQNPDLEIGI 66
Query: 63 LVLPQP----KWPAGSPATRLLK----------FMRVLRELHY-PALLDWFKSHPSPPVA 107
+L P P G + F++ L Y L+ F + P A
Sbjct: 67 KILNFPCVELGLPEGCENRDFINSYQKSDSFDLFLKFLFSTKYMKQQLESF-IETTKPSA 125
Query: 108 ILSDFFLGWTQGLAAELGLPRVVFSPSGAFALSVSFAMWTDLPTNDDPDNVDALVSFPRV 167
+++D F W A ++G+PR+VF + +FAL S+ M P + V P +
Sbjct: 126 LVADMFFPWATESAEKIGVPRLVFHGTSSFALCCSYNMRIHKPHKKVASSSTPFV-IPGL 184
Query: 168 PNCPVYPWYQISHLYRTLKEGDPDWDLHRSNMMANKTSWGIVFNSFAELERVYIDHMKKE 227
P V Q + E P + + +S+G++ NSF ELE Y D +
Sbjct: 185 PGDIVITEDQAN----VTNEETPFGKFWKEVRESETSSFGVLVNSFYELESSYADFYRSF 240
Query: 228 MGHDRVWAVGPVLPPDDDLVESMCRGGSSSVPAHDVLTWLDSRRDESVVYVCFGSRYVLT 287
+ + W +GP+ + + E RG +++ + L WLDS+ SVVY+ FGS L
Sbjct: 241 VA-KKAWHIGPLSLSNRGIAEKAGRGKKANIDEQECLKWLDSKTPGSVVYLSFGSGTGLP 299
Query: 288 AKQIHELAAALEKTDVDFVYCV-REPDERHASQDCGVLPDGFEDRVAGRGYVIRGWSQQV 346
+Q+ E+A LE + +F++ V + ++ ++ LP GFE+R G+G +IRGW+ QV
Sbjct: 300 NEQLLEIAFGLEGSGQNFIWVVSKNENQVGTGENEDWLPKGFEERNKGKGLIIRGWAPQV 359
Query: 347 AILRHKAVGAFLTHCGWNSVLEGVSAGVVMLTWPMDADQYTNAQLLVDQLGVGIRVGEGT 406
IL HKA+G F+THCGWNS LEG++AG+ M+TWPM A+Q+ N +LL L +G+ VG T
Sbjct: 360 LILDHKAIGGFVTHCGWNSTLEGIAAGLPMVTWPMGAEQFYNEKLLTKVLRIGVNVG-AT 418
Query: 407 RNIPESDELARLLAQS-----VDGPRRE--RLKARELSGAALSAVVKGGSSDRDLNDFIK 459
+ + ++R + + G + E RL+A+EL A +AV +GGSS D+N F++
Sbjct: 419 ELVKKGKLISRAQVEKAVREVIGGEKAEERRLRAKELGEMAKAAVEEGGSSYNDVNKFME 478
Query: 460 RINELK 465
+N K
Sbjct: 479 ELNGRK 484
|
Possesses quercetin 3-O-glucosyltransferase and low 7-O-glucosyltransferase activities in vitro. Also active in vitro on benzoates and benzoate derivatives. Can detoxify the explosive 2,4,6-trinitrotoluene in plant by forming O- or C-glucose conjugates. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 9 EC: 1 |
| >sp|Q8VZE9|U73B1_ARATH UDP-glycosyltransferase 73B1 OS=Arabidopsis thaliana GN=UGT73B1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 239 bits (609), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 157/497 (31%), Positives = 255/497 (51%), Gaps = 55/497 (11%)
Query: 7 HILVYPFPTSGHIIPLLDLTNRLLTLGLNVTVLITQNNLPL-----LDSLNANHPS---T 58
H L++PF GH+IP LD+ T G T+L T N L + S N ++P
Sbjct: 11 HFLLFPFMAHGHMIPTLDMAKLFATKGAKSTILTTPLNAKLFFEKPIKSFNQDNPGLEDI 70
Query: 59 SLQSLVLP--QPKWPAGSPATRLL-------------KFMRVLRELHYP--ALLDWFKSH 101
++Q L P + P G T + KF+ ++ P LL +
Sbjct: 71 TIQILNFPCTELGLPDGCENTDFIFSTPDLNVGDLSQKFLLAMKYFEEPLEELLVTMR-- 128
Query: 102 PSPPVAILSDFFLGWTQGLAAELGLPRVVFSPSGAFALSVSFAMW--TDLPTNDDPDNVD 159
P ++ + F W+ +A + G+PR+VF +G F+L S + ++ T+ +P +
Sbjct: 129 ---PDCLVGNMFFPWSTKVAEKFGVPRLVFHGTGYFSLCASHCIRLPKNVATSSEPFVIP 185
Query: 160 ALVSFPRVPNCPVYPWYQISHLYRTLKEGDPDWDLHRSNMMANKTSWGIVFNSFAELERV 219
L + V + S + R +K + + + S+G++ NSF ELE+
Sbjct: 186 DLPGDILITEEQVMETEEESVMGRFMK----------AIRDSERDSFGVLVNSFYELEQA 235
Query: 220 YIDHMKKEMGHDRVWAVGPVLPPDDDLVESMCRGGSSSVPAHDVLTWLDSRRDESVVYVC 279
Y D+ K + R W +GP+ + E RG +S+ H+ L WLDS++ +SV+Y+
Sbjct: 236 YSDYFKSFVAK-RAWHIGPLSLGNRKFEEKAERGKKASIDEHECLKWLDSKKCDSVIYMA 294
Query: 280 FGSRYVLTAKQIHELAAALEKTDVDFVYCVREPDERHASQDCGVLPDGFEDRVAGRGYVI 339
FG+ +Q+ E+AA L+ + DFV+ V + +D LP+GFE++ G+G +I
Sbjct: 295 FGTMSSFKNEQLIEIAAGLDMSGHDFVWVVNRKGSQVEKEDW--LPEGFEEKTKGKGLII 352
Query: 340 RGWSQQVAILRHKAVGAFLTHCGWNSVLEGVSAGVVMLTWPMDADQYTNAQLLVDQLGVG 399
RGW+ QV IL HKA+G FLTHCGWNS+LEGV+AG+ M+TWP+ A+Q+ N +L+ L G
Sbjct: 353 RGWAPQVLILEHKAIGGFLTHCGWNSLLEGVAAGLPMVTWPVGAEQFYNEKLVTQVLKTG 412
Query: 400 IRVGEGTRNIPESDELARLLAQSVDGPRRE-------RLKARELSGAALSAVVKGGSSDR 452
+ VG D ++R + V+G RE R +A+EL+ A +AV +GGSSD
Sbjct: 413 VSVGVKKMMQVVGDFISR---EKVEGAVREVMVGEERRKRAKELAEMAKNAVKEGGSSDL 469
Query: 453 DLNDFIKRINELKSGKN 469
+++ ++ + +K K
Sbjct: 470 EVDRLMEELTLVKLQKE 486
|
Possesses low quercetin 3-O-glucosyltransferase and 7-O-glucosyltransferase activities in vitro. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: - |
| >sp|Q9ZQG4|U73B5_ARATH UDP-glycosyltransferase 73B5 OS=Arabidopsis thaliana GN=UGT73B5 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 238 bits (607), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 153/485 (31%), Positives = 243/485 (50%), Gaps = 36/485 (7%)
Query: 7 HILVYPFPTSGHIIPLLDLTNRLLTLGLNVTVLITQNNLPL----LDSLNANHPSTSLQS 62
HIL +PF GH+IP+LD+ G T+L T N + +++ +P +
Sbjct: 10 HILFFPFMAQGHMIPILDMAKLFSRRGAKSTLLTTPINAKIFEKPIEAFKNQNPDLEIGI 69
Query: 63 LVLPQP----KWPAGSPATRLLK----------FMRVLRELHY-PALLDWFKSHPSPPVA 107
+ P P G + F++ L Y L+ F + P A
Sbjct: 70 KIFNFPCVELGLPEGCENADFINSYQKSDSGDLFLKFLFSTKYMKQQLESF-IETTKPSA 128
Query: 108 ILSDFFLGWTQGLAAELGLPRVVFSPSGAFALSVSFAMWTDLPTNDDPDNVDALVSFPRV 167
+++D F W A +LG+PR+VF + F+L S+ M P + V P +
Sbjct: 129 LVADMFFPWATESAEKLGVPRLVFHGTSFFSLCCSYNMRIHKPHKKVATSSTPFV-IPGL 187
Query: 168 PNCPVYPWYQISHLYRTLKEGDPDWDLHRSNMMANKTSWGIVFNSFAELERVYIDHMKKE 227
P V Q + KE P + + S+G++ NSF ELE Y D +
Sbjct: 188 PGDIVITEDQAN----VAKEETPMGKFMKEVRESETNSFGVLVNSFYELESAYADFYRSF 243
Query: 228 MGHDRVWAVGPVLPPDDDLVESMCRGGSSSVPAHDVLTWLDSRRDESVVYVCFGSRYVLT 287
+ R W +GP+ + +L E RG +++ + L WLDS+ SVVY+ FGS T
Sbjct: 244 VA-KRAWHIGPLSLSNRELGEKARRGKKANIDEQECLKWLDSKTPGSVVYLSFGSGTNFT 302
Query: 288 AKQIHELAAALEKTDVDFVYCVREPDERHASQDCGVLPDGFEDRVAGRGYVIRGWSQQVA 347
Q+ E+A LE + F++ VR+ + + +++ LP+GF++R G+G +I GW+ QV
Sbjct: 303 NDQLLEIAFGLEGSGQSFIWVVRKNENQGDNEEW--LPEGFKERTTGKGLIIPGWAPQVL 360
Query: 348 ILRHKAVGAFLTHCGWNSVLEGVSAGVVMLTWPMDADQYTNAQLLVDQLGVGIRVGEGTR 407
IL HKA+G F+THCGWNS +EG++AG+ M+TWPM A+Q+ N +LL L +G+ VG T
Sbjct: 361 ILDHKAIGGFVTHCGWNSAIEGIAAGLPMVTWPMGAEQFYNEKLLTKVLRIGVNVG-ATE 419
Query: 408 NIPESDELARLLAQS-----VDGPRRE--RLKARELSGAALSAVVKGGSSDRDLNDFIKR 460
+ + ++R + + G + E RL A++L A +AV +GGSS D+N F++
Sbjct: 420 LVKKGKLISRAQVEKAVREVIGGEKAEERRLWAKKLGEMAKAAVEEGGSSYNDVNKFMEE 479
Query: 461 INELK 465
+N K
Sbjct: 480 LNGRK 484
|
Possesses quercetin 3-O-glucosyltransferase activity in vitro. Involved in stress or defense responses. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 9 EC: 1 |
| >sp|Q8H0F2|ANGT_GENTR Anthocyanin 3'-O-beta-glucosyltransferase OS=Gentiana triflora PE=1 SV=1 | Back alignment and function description |
|---|
Score = 236 bits (601), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 135/410 (32%), Positives = 222/410 (54%), Gaps = 18/410 (4%)
Query: 7 HILVYPFPTSGHIIPLLDLTNRLLTLGLNVTVLITQNNLPL-LDSLNANHP---STSLQS 62
H+ +PF +GHI+P +D+ + G+ T++ T NN + L ++N + S+ +
Sbjct: 5 HVFFFPFLANGHILPTIDMAKLFSSRGVKATLITTHNNSAIFLKAINRSKILGFDISVLT 64
Query: 63 LVLPQPKW--PAGSPATRLLKFMRVLRELHYPALLDWFKSHPSP----PVAILSDFFLGW 116
+ P ++ P G + + ++ E +L P A+++D F W
Sbjct: 65 IKFPSAEFGLPEGYETADQARSIDMMDEFFRACILLQEPLEELLKEHRPQALVADLFFYW 124
Query: 117 TQGLAAELGLPRVVFSPSGAFALSVSFAMWTDLPTNDDPDNVDALVSFPRVPNCPVYPWY 176
AA+ G+PR++F S +FA+ + ++ + P + + D V P +P+ +
Sbjct: 125 ANDAAAKFGIPRLLFHGSSSFAMIAAESVRRNKPYKNLSSDSDPFV-VPDIPDKIILTKS 183
Query: 177 QISHLYRTLKEGDPDWDLHRSNMMANKTSWGIVFNSFAELERVYIDHMKKEMGHDRVWAV 236
Q+ T + ++ ++ + +G++ NSF ELE Y+D+ K +G R W +
Sbjct: 184 QVPTPDETEENNTHITEMWKNISESENDCYGVIVNSFYELEPDYVDYCKNVLGR-RAWHI 242
Query: 237 GPVLPPDDDLVESMCRGGSSSVPAHDVLTWLDSRRDESVVYVCFGSRYVLTAKQIHELAA 296
GP+ +++ + RG S + AH+ L WLDS+ +SVVYVCFGS A Q+HELA
Sbjct: 243 GPLSLCNNEGEDVAERGKKSDIDAHECLNWLDSKNPDSVVYVCFGSMANFNAAQLHELAM 302
Query: 297 ALEKTDVDFVYCVREP-DERHASQDCGVLPDGFEDRVA--GRGYVIRGWSQQVAILRHKA 353
LE++ +F++ VR DE S+ PDGFE RV +G +I+GW+ QV IL H+A
Sbjct: 303 GLEESGQEFIWVVRTCVDEEDESK---WFPDGFEKRVQENNKGLIIKGWAPQVLILEHEA 359
Query: 354 VGAFLTHCGWNSVLEGVSAGVVMLTWPMDADQYTNAQLLVDQLGVGIRVG 403
VGAF++HCGWNS LEG+ GV M+TWP+ A+Q+ N +L+ D L G+ VG
Sbjct: 360 VGAFVSHCGWNSTLEGICGGVAMVTWPLFAEQFYNEKLMTDILRTGVSVG 409
|
Specifically glucosylates the 3'-hydroxy group of delphinidin 3,5-di-O-glucoside to produce gentiodelphin. Shows a strict specificity for UDP-glucose as donor. Gentiana triflora (taxid: 55190) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 2 EC: 3 EC: 8 |
| >sp|Q9ZQ94|U73C5_ARATH UDP-glycosyltransferase 73C5 OS=Arabidopsis thaliana GN=UGT73C5 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 232 bits (591), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 157/499 (31%), Positives = 249/499 (49%), Gaps = 51/499 (10%)
Query: 7 HILVYPFPTSGHIIPLLDLTNRLLTLGLNVTVLITQNNLPLLDSLNANHPSTSLQSLVLP 66
H +++PF GH+IP++D+ L G+ +T++ T +N ++ N S + L
Sbjct: 12 HFVLFPFMAQGHMIPMVDIARLLAQRGVIITIVTTPHNAARFKNV-LNRAIESGLPINLV 70
Query: 67 QPKWP---AG-----------SPATRLLKFMRVLRELHYPA--LLDWFKSHPSPPVAILS 110
Q K+P AG R++ F + + L P L++ PS ++S
Sbjct: 71 QVKFPYLEAGLQEGQENIDSLDTMERMIPFFKAVNFLEEPVQKLIEEMNPRPS---CLIS 127
Query: 111 DFFLGWTQGLAAELGLPRVVFSPSGAFALSVSFAMWTDLPTNDDPDNVDALVSFPRVPNC 170
DF L +T +A + +P+++F G F L + + D+ + L + P P+
Sbjct: 128 DFCLPYTSKIAKKFNIPKILFHGMGCFCLLCMHVLRKNREILDNLKSDKELFTVPDFPDR 187
Query: 171 PVYPWYQISHLYRTLKEGDPDW-DLHRSNMMANKTSWGIVFNSFAELERVYIDHMKKEMG 229
+ Q+ + + GD W D+ + AN+TS+G++ NSF ELE Y K E+
Sbjct: 188 VEFTRTQVP-VETYVPAGD--WKDIFDGMVEANETSYGVIVNSFQELEPAYAKDYK-EVR 243
Query: 230 HDRVWAVGPVLPPDDDLVESMCRGGSSSVPAHDVLTWLDSRRDESVVYVCFGSRYVLTAK 289
+ W +GPV + + RG S + + L WLDS++ SV+YVC GS L
Sbjct: 244 SGKAWTIGPVSLCNKVGADKAERGNKSDIDQDECLKWLDSKKHGSVLYVCLGSICNLPLS 303
Query: 290 QIHELAAALEKTDVDFVYCVREPDERHASQDCGVLPDGFEDRVAGRGYVIRGWSQQVAIL 349
Q+ EL LE++ F++ +R E++ GFEDR+ RG +I+GWS Q+ IL
Sbjct: 304 QLKELGLGLEESQRPFIWVIRGW-EKYKELVEWFSESGFEDRIQDRGLLIKGWSPQMLIL 362
Query: 350 RHKAVGAFLTHCGWNSVLEGVSAGVVMLTWPMDADQYTNAQLLVDQLGVGIRVG------ 403
H +VG FLTHCGWNS LEG++AG+ +LTWP+ ADQ+ N +L+V+ L G+R G
Sbjct: 363 SHPSVGGFLTHCGWNSTLEGITAGLPLLTWPLFADQFCNEKLVVEVLKAGVRSGVEQPMK 422
Query: 404 -------------EGTRNIPESDELARLLAQSVDGPRRERLKARELSGAALSAVVKGGSS 450
EG + E L+ +S D R R +A+EL +A AV +GGSS
Sbjct: 423 WGEEEKIGVLVDKEGVKKAVE-----ELMGESDDAKERRR-RAKELGDSAHKAVEEGGSS 476
Query: 451 DRDLNDFIKRINELKSGKN 469
+++ ++ I EL N
Sbjct: 477 HSNISFLLQDIMELAEPNN 495
|
Specifically catalyzes 23-O-glucosylation of brassinosteroids, resulting probably in their inactivation. Also, involved in the O-glucosylation of trans-zeatin and dihydrozeatin. Active in vitro on cis-zeatin, dihydrozeatin-9-N-Glc, and olomoucine. Also involved in the detoxification of the Fusarium mycotoxin deoxynivalenol by the transfer of glucose from UDP-glucose to the hydroxyl group at C-3. Possesses low quercetin 7-O-glucosyltransferase and 4'-O-glucosyltransferase activities in vitro. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: - |
| >sp|Q9LXV0|U92A1_ARATH UDP-glycosyltransferase 92A1 OS=Arabidopsis thaliana GN=UGT92A1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 230 bits (587), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 160/490 (32%), Positives = 247/490 (50%), Gaps = 51/490 (10%)
Query: 3 PAGAHILVYPFPTSGHIIPLLDLTNRLLTLGL-------NVTVLITQNNLPLLDSLNANH 55
P I+++PF GHIIP + L RL + + ++++ T +N+P + +N
Sbjct: 6 PRNLRIVMFPFMGQGHIIPFVALALRLEKIMIMNRANKTTISMINTPSNIP---KIRSNL 62
Query: 56 PSTSLQSLV-LPQPKWPAGSP-------------ATRLLKFMRVLRELHYPALLDWFKSH 101
P S SL+ LP G P LL+ R LRE + K
Sbjct: 63 PPESSISLIELPFNSSDHGLPHDGENFDSLPYSLVISLLEASRSLREPFRDFMTKILKEE 122
Query: 102 PSPPVAILSDFFLGWTQGLAAELGLPRVVFSPSGAFALSVSFAMWTDLPTNDDPDNVDAL 161
V ++ DFFLGW + E+G+ V+FS SGAF L ++W +LP + + L
Sbjct: 123 GQSSVIVIGDFFLGWIGKVCKEVGVYSVIFSASGAFGLGCYRSIWLNLPHKETKQDQFLL 182
Query: 162 VSFPRVPNCPVYPWYQISHLYRTLKEGD--PDWDLHRSNMMANKTSW-GIVFNSFAELER 218
FP + + L + E D DW + ++ + + G +FN+ AE+++
Sbjct: 183 DDFPEAGEI------EKTQLNSFMLEADGTDDWSVFMKKIIPGWSDFDGFLFNTVAEIDQ 236
Query: 219 VYIDHMKKEMGHDRVWAVGPVLPPDDDLVESMCRGGSSSVPAHDVLTWLDSRRDESVVYV 278
+ + + ++ G VW VGPVL D V G S+ A V +WLDS+ D SVVYV
Sbjct: 237 MGLSYFRRITGVP-VWPVGPVLKSPDKKV-----GSRSTEEA--VKSWLDSKPDHSVVYV 288
Query: 279 CFGSRYVLTAKQIHELAAALEKTDVDFVYCVREPDERHASQDC---GVLPDGFEDRV--A 333
CFGS + + ELA ALE ++ +F++ VR P + G LP+GFE+R+ +
Sbjct: 289 CFGSMNSILQTHMLELAMALESSEKNFIWVVRPPIGVEVKSEFDVKGYLPEGFEERITRS 348
Query: 334 GRGYVIRGWSQQVAILRHKAVGAFLTHCGWNSVLEGVSAGVVMLTWPMDADQYTNAQLLV 393
RG +++ W+ QV IL HKA FL+HCGWNS+LE +S GV +L WPM A+Q+ N+ L+
Sbjct: 349 ERGLLVKKWAPQVDILSHKATCVFLSHCGWNSILESLSHGVPLLGWPMAAEQFFNSILME 408
Query: 394 DQLGVGIRVGEGTRNIPESDELA---RLLAQSVDGPRRERLKARELSGAALSAVVKG--G 448
+GV + V G R + D++ +L+ + + + R KARE+ A+V G G
Sbjct: 409 KHIGVSVEVARGKRCEIKCDDIVSKIKLVMEETEVGKEIRKKAREVKELVRRAMVDGVKG 468
Query: 449 SSDRDLNDFI 458
SS L +F+
Sbjct: 469 SSVIGLEEFL 478
|
Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: - |
| >sp|Q9ZQ97|U73C4_ARATH UDP-glycosyltransferase 73C4 OS=Arabidopsis thaliana GN=UGT73C4 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 230 bits (586), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 160/501 (31%), Positives = 248/501 (49%), Gaps = 56/501 (11%)
Query: 7 HILVYPFPTSGHIIPLLDLTNRLLTLGLNVTVLITQNNLPLLDS-----------LNANH 55
H +++PF GH+IP++D+ L G VT++ T+ N ++ +N H
Sbjct: 14 HFILFPFMAQGHMIPMIDIARLLAQRGATVTIVTTRYNAGRFENVLSRAMESGLPINIVH 73
Query: 56 PSTSLQSLVLPQPKWPAGS--PATRLLKFMRVLRELHYPA--LLDWFKSHPSPPVAILSD 111
+ Q LP+ K S ++ F + + L P L++ K PS I+SD
Sbjct: 74 VNFPYQEFGLPEGKENIDSYDSMELMVPFFQAVNMLEDPVMKLMEEMKPRPS---CIISD 130
Query: 112 FFLGWTQGLAAELGLPRVVFSPSGAFALSVSFAMWTDLP--TNDDPDNVDALV-SFP-RV 167
L +T +A + +P++VF +G F L + +L N D LV SFP RV
Sbjct: 131 LLLPYTSKIARKFSIPKIVFHGTGCFNLLCMHVLRRNLEILKNLKSDKDYFLVPSFPDRV 190
Query: 168 ----PNCPVYPWYQISHLYRTLKEGDPDWDLHRSNMM-ANKTSWGIVFNSFAELERVYI- 221
P PV T GD W M+ A TS+G++ N+F ELE Y+
Sbjct: 191 EFTKPQVPV----------ETTASGD--WKAFLDEMVEAEYTSYGVIVNTFQELEPAYVK 238
Query: 222 DHMKKEMGHDRVWAVGPVLPPDDDLVESMCRGGSSSVPAHDVLTWLDSRRDESVVYVCFG 281
D+ K G +VW++GPV + + RG +++ + L WLDS+ D SV+YVC G
Sbjct: 239 DYTKARAG--KVWSIGPVSLCNKAGADKAERGNQAAIDQDECLQWLDSKEDGSVLYVCLG 296
Query: 282 SRYVLTAKQIHELAAALEKTDVDFVYCVREPDERHASQDCGVLPDGFEDRVAGRGYVIRG 341
S L Q+ EL LEK+ F++ +R E++ ++ GFE+R+ RG +I+G
Sbjct: 297 SICNLPLSQLKELGLGLEKSQRSFIWVIR-GWEKYNELYEWMMESGFEERIKERGLLIKG 355
Query: 342 WSQQVAILRHKAVGAFLTHCGWNSVLEGVSAGVVMLTWPMDADQYTNAQLLVDQLGVGIR 401
WS QV IL H +VG FLTHCGWNS LEG+++G+ ++TWP+ DQ+ N +L+V L G+
Sbjct: 356 WSPQVLILSHPSVGGFLTHCGWNSTLEGITSGIPLITWPLFGDQFCNQKLVVQVLKAGVS 415
Query: 402 VG-EGTRNIPESDELARL------------LAQSVDGPRRERLKARELSGAALSAVVKGG 448
G E E +++ L L + D + R + +EL +A AV +GG
Sbjct: 416 AGVEEVMKWGEEEKIGVLVDKEGVKKAVEELMGASDDAKERRRRVKELGESAHKAVEEGG 475
Query: 449 SSDRDLNDFIKRINELKSGKN 469
SS ++ ++ I + KN
Sbjct: 476 SSHSNITYLLQDIMQQVKSKN 496
|
Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: - |
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 473 | ||||||
| 255547071 | 479 | UDP-glucosyltransferase, putative [Ricin | 0.949 | 0.937 | 0.643 | 1e-165 | |
| 225455734 | 480 | PREDICTED: UDP-glycosyltransferase 89B1- | 0.968 | 0.954 | 0.596 | 1e-156 | |
| 255547073 | 461 | UDP-glucosyltransferase, putative [Ricin | 0.955 | 0.980 | 0.625 | 1e-156 | |
| 216296850 | 465 | UGT1 [Pueraria montana var. lobata] | 0.968 | 0.984 | 0.536 | 1e-148 | |
| 356517231 | 467 | PREDICTED: UDP-glycosyltransferase 89B1- | 0.970 | 0.982 | 0.522 | 1e-143 | |
| 216296858 | 462 | UGT5 [Pueraria montana var. lobata] | 0.961 | 0.984 | 0.527 | 1e-142 | |
| 255547075 | 472 | UDP-glucosyltransferase, putative [Ricin | 0.953 | 0.955 | 0.525 | 1e-134 | |
| 387135288 | 470 | UDP-glycosyltransferase 1 [Linum usitati | 0.955 | 0.961 | 0.558 | 1e-132 | |
| 387135290 | 484 | UDP-glycosyltransferase 1 [Linum usitati | 0.972 | 0.950 | 0.532 | 1e-131 | |
| 297839263 | 473 | UDP-glucoronosyl/UDP-glucosyl transferas | 0.949 | 0.949 | 0.507 | 1e-129 |
| >gi|255547071|ref|XP_002514593.1| UDP-glucosyltransferase, putative [Ricinus communis] gi|223546197|gb|EEF47699.1| UDP-glucosyltransferase, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 586 bits (1511), Expect = e-165, Method: Compositional matrix adjust.
Identities = 299/465 (64%), Positives = 366/465 (78%), Gaps = 16/465 (3%)
Query: 6 AHILVYPFPTSGHIIPLLDLTNRLLTLGLNVTVLITQNNLPLLDSLNANHPSTSLQSLVL 65
AHILV+PFP+SGHIIPLLDLT LL+ GL +TV IT NNLPLL+ L ++ + LQ L+L
Sbjct: 2 AHILVFPFPSSGHIIPLLDLTQSLLSRGLIITVAITTNNLPLLNPLLSS--TQQLQHLLL 59
Query: 66 PQPKWPAGSPA---TRLLKFMRVLRELHYPALLDWFKSHPSPPVAILSDFFLGWTQGLAA 122
P P + A RL +R +RE HYP LL+WF+SH SPPVAI+SDFFLGWT LA+
Sbjct: 60 PSPSINPSATAPSKNRLFSILRFMRETHYPILLNWFQSHTSPPVAIISDFFLGWTYHLAS 119
Query: 123 ELGLPRVVFSPSGAFALSVSFAMWTDLPTNDDPDNVDALVSFPRVPNCPVYPWYQISHLY 182
+LGLPR+VFSPSGAFA SV + W+D P ND+P+N D +VSFP +PN P YPW+QISHLY
Sbjct: 120 QLGLPRIVFSPSGAFAFSVGASTWSDQPQNDNPENHDFVVSFPNIPNSPSYPWWQISHLY 179
Query: 183 RTLKEGDPDWDLHRSNMMANKTSWGIVFNSFAELERVYIDHMKKEMGHDRVWAVGPVLPP 242
R K D DW+ +R + +AN SWG++FNSF ELERVYIDHMK E G+ RVWAVGP LP
Sbjct: 180 RMPK--DSDWEFYRDSNLANMASWGVIFNSFTELERVYIDHMKNEFGNVRVWAVGPALPS 237
Query: 243 DDDLV-ESMCRGGSSSVPAHDVLTWLDSR-RDESVVYVCFGSRYVLTAKQIHELAAALEK 300
DDDL+ + RGG+SSVP HDVLTWLDS +D SVVYV FGSR +LT +Q++ELAA LEK
Sbjct: 238 DDDLMGPAANRGGTSSVPCHDVLTWLDSHHKDHSVVYVAFGSRAMLTCEQMNELAAGLEK 297
Query: 301 TDVDFVYCVREPDERHASQDCGVLPDGFEDRVAGRGYVIRGWSQQVAILRHKAVGAFLTH 360
+ VDF+ CVR+ D G+LPDGFEDRVAGRG++I+GW+ Q+AILRH+A+GAFLTH
Sbjct: 298 SGVDFILCVRQ------QGDYGILPDGFEDRVAGRGFIIKGWAPQMAILRHRAIGAFLTH 351
Query: 361 CGWNSVLEGVSAGVVMLTWPMDADQYTNAQLLVDQLGVGIRVGEGTRNIPESDELARLLA 420
CGWNSVLEG+SAGVVMLTWPM ADQ+TNAQLLV +L VG+RVGE T+ IPES ELAR+L+
Sbjct: 352 CGWNSVLEGISAGVVMLTWPMGADQFTNAQLLVGELEVGMRVGEATQKIPESGELARILS 411
Query: 421 QSVDGPRRERLKARELSGAALSAVVKGGSSDRDLNDFIKRINELK 465
+SV+ RRER++A++L AA SA VKGGSS+ DL+ IKR+NELK
Sbjct: 412 ESVEENRRERVRAKKLKEAARSA-VKGGSSEADLDRLIKRLNELK 455
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225455734|ref|XP_002268089.1| PREDICTED: UDP-glycosyltransferase 89B1-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 558 bits (1439), Expect = e-156, Method: Compositional matrix adjust.
Identities = 278/466 (59%), Positives = 358/466 (76%), Gaps = 8/466 (1%)
Query: 4 AGAHILVYPFPTSGHIIPLLDLTNRLLTLGLNVTVLITQNNLPLLDSLNANHPSTSLQSL 63
A AH+L+YPF +SGHIIP+LDL +LL+ GL VTVL+T +NLPLLDSL + +PS S QSL
Sbjct: 5 AAAHVLLYPFYSSGHIIPILDLATKLLSRGLEVTVLVTPSNLPLLDSLLSKYPS-SFQSL 63
Query: 64 VLPQPKWPAGSPATRLLKFMRVLRELHYPALLDWFKSHPSPPVAILSDFFLGWTQGLAAE 123
VLP P+ S A LL +R + L ++ WF SHP+PPVAI+SDFFLGWT +A +
Sbjct: 64 VLPLPESGPVS-AKNLLFNLRAMTGLS-DDIIQWFHSHPNPPVAIVSDFFLGWTHKIACQ 121
Query: 124 LGLPRVVFSPSGAFALSVSFAMWTDLPTNDDPDNVDALVSFPRVPNCPVYPWYQISHLYR 183
LG+ +VFSPSG LSV +A+W D P ND+P+N D +VSFP +PN P YPW+QIS LYR
Sbjct: 122 LGVSHIVFSPSGVLGLSVGYAVWRDRPKNDEPENHDFMVSFPSIPNSPSYPWWQISVLYR 181
Query: 184 TLKEGDPDWDLHRSNMMANKTSWGIVFNSFAELERVYIDHMKKEMGHDRVWAVGPVLP-P 242
L++GDPD + R+ M+ N SWG+V N+F ELERVYI+ MKK MGH+RVWAVGP+LP P
Sbjct: 182 NLEDGDPDKEFFRNCMLGNIASWGLVVNTFTELERVYIEAMKKLMGHNRVWAVGPLLPAP 241
Query: 243 DDDLVESMCRGGSSSVPAHDVLTWLDSRRDESVVYVCFGSRYVLTAKQIHELAAALEKTD 302
+DD + RGGSS+VP+H VL+WLD ++SVVY+CFGSR L +Q+ LAAALE +
Sbjct: 242 EDDDAK---RGGSSAVPSHKVLSWLDQCENDSVVYICFGSRTSLPNQQMVVLAAALEASG 298
Query: 303 VDFVYCVREPDERHASQDCGVLPDGFEDRVAGRGYVIRGWSQQVAILRHKAVGAFLTHCG 362
V+F++CVR+ + + + GV+P+GFEDRV RG+VIRGW+ QV ILRH+AVGAFLTHCG
Sbjct: 299 VNFIWCVRQQGKGDVASESGVIPEGFEDRVGNRGFVIRGWAPQVQILRHRAVGAFLTHCG 358
Query: 363 WNSVLEGVSAGVVMLTWPMDADQYTNAQLLVDQLGVGIRVGEGTRNIPESDELARLLAQS 422
WNS LEG++AG+VMLTWPM ADQYTNA LLV+++GVGIRV E TR +P+S ELAR+L+++
Sbjct: 359 WNSTLEGLAAGLVMLTWPMGADQYTNANLLVNEVGVGIRVAEETRRVPDSTELARILSEA 418
Query: 423 VDGPRRERLKARELSGAALSAVVKGGSSDRDLNDFIKRINELKSGK 468
VDG R E+++A EL AALSA GGSSDRDL+D ++R+ ELK K
Sbjct: 419 VDGSRPEKVRAMELRDAALSA-ANGGSSDRDLDDLVERLKELKCEK 463
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255547073|ref|XP_002514594.1| UDP-glucosyltransferase, putative [Ricinus communis] gi|223546198|gb|EEF47700.1| UDP-glucosyltransferase, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 558 bits (1439), Expect = e-156, Method: Compositional matrix adjust.
Identities = 291/465 (62%), Positives = 354/465 (76%), Gaps = 13/465 (2%)
Query: 4 AGAHILVYPFPTSGHIIPLLDLTNRLLTLGLNVTVLITQNNLPLLDSLNANHPSTSLQSL 63
GAHILV+PF +SGH+IPLLDLT LL GL +TV+IT +NLPLL+ L ++H T L L
Sbjct: 8 GGAHILVFPFSSSGHVIPLLDLTRSLLNRGLVITVVITTDNLPLLNPLLSSHSPTQLHHL 67
Query: 64 VLPQPKWPAGSPATR-LLKFMRVLRELHYPALLDWFKSHPSPPVAILSDFFLGWTQGLAA 122
VLP P S T L+ +R + HYP LL+WFKSH SPP+AI+SDFFLGWT LA+
Sbjct: 68 VLPSPDIDDASSTTHPLIAKLRSMHA-HYPFLLNWFKSHASPPLAIISDFFLGWTHHLAS 126
Query: 123 ELGLPRVVFSPSGAFALSVSFAMWTDLPTNDDPDNVDALVSFPRVPNCPVYPWYQISHLY 182
+LGLPRVVFSPSGA A SV ++W D P N++ N+D +VSFP++PN P YPW+QI H+Y
Sbjct: 127 QLGLPRVVFSPSGASAFSVLTSIWHDQPQNEN-GNLDFVVSFPKIPNSPSYPWWQIFHIY 185
Query: 183 RTLKEGDPDWDLHRSNMMANKTSWGIVFNSFAELERVYIDHMKKEMGHDRVWAVGPVLPP 242
R K D DW+ R + +AN SWGI+FNSF ELE VYIDH+KKE G+DRVWAVGP LP
Sbjct: 186 RMSK--DSDWEFFRDSYLANIASWGIIFNSFTELEGVYIDHVKKEFGNDRVWAVGPALPS 243
Query: 243 DDDLVESMC-RGGSSSVPAHDVLTWLDSRRDESVVYVCFGSRYVLTAKQIHELAAALEKT 301
+DDL+ + RGG+SSVP HDVLTWLDSR D SVVYV FGS VLT+KQ+ L A LEK+
Sbjct: 244 NDDLMGPVANRGGTSSVPCHDVLTWLDSREDLSVVYVAFGSWTVLTSKQMEVLVAGLEKS 303
Query: 302 DVDFVYCVREPDERHASQDCGVLPDGFEDRVAGRGYVIRGWSQQVAILRHKAVGAFLTHC 361
V F+ C R+ + D VL DGFEDR AGRG++++GW+ QVAILRH+AVGAFLTHC
Sbjct: 304 GVSFILCARQ------AGDHSVLLDGFEDRTAGRGFIVKGWAPQVAILRHRAVGAFLTHC 357
Query: 362 GWNSVLEGVSAGVVMLTWPMDADQYTNAQLLVDQLGVGIRVGEGTRNIPESDELARLLAQ 421
GWNSVLEG+SAGVVMLTWPM ADQ+TNAQLL D+L VGIRVGE T+ IP+SDELAR+LA+
Sbjct: 358 GWNSVLEGISAGVVMLTWPMSADQFTNAQLLADELKVGIRVGEATQKIPDSDELARILAE 417
Query: 422 SVDGPRRERLKARELSGAALSAVVKGGSSDRDLNDFIKRINELKS 466
SV ER+KA+EL AAL+A VKGGSSD DL+ + R+NELK+
Sbjct: 418 SVKKNLPERVKAKELQEAALNA-VKGGSSDADLDGLVSRLNELKT 461
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|216296850|gb|ACJ72158.1| UGT1 [Pueraria montana var. lobata] | Back alignment and taxonomy information |
|---|
Score = 530 bits (1366), Expect = e-148, Method: Compositional matrix adjust.
Identities = 250/466 (53%), Positives = 343/466 (73%), Gaps = 8/466 (1%)
Query: 1 MLPAGAHILVYPFPTSGHIIPLLDLTNRLLTLGLNVTVLITQNNLPLLDSLNANHPSTSL 60
M A H+L YPFP+SGH+IPLLD T L++ G+ VT+L+ P ++L + S L
Sbjct: 1 MSTARTHVLAYPFPSSGHVIPLLDFTKALVSRGVQVTLLVA----PYNENLVPKNYSPLL 56
Query: 61 QSLVLPQPKWPAGSPATRLLKFMRVLRELHYPALLDWFKSHPSPPVAILSDFFLGWTQGL 120
Q+L+LP+P +P RL+ + +R+ HYP ++DW K+ P+PP AI+SDFFLGWT L
Sbjct: 57 QTLLLPEPHFP-NPKQNRLMALVTFMRQHHYPVIVDWAKAQPTPPSAIISDFFLGWTHLL 115
Query: 121 AAELGLPRVVFSPSGAFALSVSFAMWTDLPTNDDPDNVDALVSFPRVPNCPVYPWYQISH 180
A +L +PR+VFSPSGAFALSVS+++W D P ND+P++ +++VSFP +PN P+YPW+Q++H
Sbjct: 116 ARDLHVPRLVFSPSGAFALSVSYSLWRDAPQNDNPEDPNSVVSFPNLPNSPIYPWWQMTH 175
Query: 181 LYRTLKEGDPDWDLHRSNMMANKTSWGIVFNSFAELERVYIDHMKKEMGHDRVWAVGPVL 240
L+R + G P+W+ HR NM+ N SWG+VFN+F ELERVY++HMKKE+ H+RVWAVGPVL
Sbjct: 176 LFRETERGGPEWEFHRENMLFNIDSWGVVFNTFTELERVYLNHMKKELNHERVWAVGPVL 235
Query: 241 PPDDDLVESMCRGGSSSVPAHDVLTWLDSRRDESVVYVCFGSRYVLTAKQIHELAAALEK 300
P + E RGG+S+V HD++ WLDSR + SV+YVCFGSR LT+ Q+ L LE
Sbjct: 236 PIQNGSTEPEERGGNSTVSRHDIMEWLDSRDEGSVIYVCFGSRTFLTSSQMEVLTRGLEL 295
Query: 301 TDVDFVYCVREPDERHASQDCGVLPDGFEDRVAGRGYVIRGWSQQVAILRHKAVGAFLTH 360
+ V+F+ VR PDERH +++ G +P GF DRV GRG++I GW+ Q+ IL H+AVGAFLTH
Sbjct: 296 SGVNFILSVRVPDERHVAKEHGKVPCGFSDRVRGRGFIIEGWAPQLVILSHRAVGAFLTH 355
Query: 361 CGWNSVLEGVSAGVVMLTWPMDADQYTNAQLLVDQLGVGIRVGEGTRNIPESDELARLLA 420
CGWNSVLEG+ +GVVMLTWPM ADQYTNA+LLVDQLGV +R EG + +PE+ EL + +
Sbjct: 356 CGWNSVLEGLVSGVVMLTWPMGADQYTNAKLLVDQLGVAVRAAEGEK-VPEASELGKRIE 414
Query: 421 QSVDGPRRERLKARELSGAALSAV-VKGGSSDRDLNDFIKRINELK 465
+++ G +ER KA +L AL A+ GGSS R+L+ +K +NE+K
Sbjct: 415 KAL-GRTKERAKAEKLRDDALRAIGNNGGSSQRELDALVKLLNEVK 459
|
Source: Pueraria montana var. lobata Species: Pueraria montana Genus: Pueraria Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356517231|ref|XP_003527292.1| PREDICTED: UDP-glycosyltransferase 89B1-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 513 bits (1322), Expect = e-143, Method: Compositional matrix adjust.
Identities = 244/467 (52%), Positives = 337/467 (72%), Gaps = 8/467 (1%)
Query: 1 MLPAGAHILVYPFPTSGHIIPLLDLTNRLLTLGLNVTVLITQNNLPLLDSLNANHPSTSL 60
M A H+L YPFPTSGH+IPLLD T L++ G++VTVL+T N LL + S L
Sbjct: 1 MSTATTHVLAYPFPTSGHVIPLLDFTKTLVSRGVHVTVLVTPYNEALL----PKNYSPLL 56
Query: 61 QSLVLPQPKWPAGSPATRLLKFMRVLRELHYPALLDWFKSHPSPPVAILSDFFLGWTQGL 120
Q+L+LP+P++P RL+ + +R HYP ++DW ++ P PP AI+SDFFLGWT L
Sbjct: 57 QTLLLPEPQFP-NPKQNRLVSMVTFMRHHHYPIIMDWAQAQPIPPAAIISDFFLGWTHLL 115
Query: 121 AAELGLPRVVFSPSGAFALSVSFAMWTDLPTNDDPDNVDALVSFPRVPNCPVYPWYQISH 180
A +L +PRVVFSPSGAFALSVS+++W D P ND+P++ + +VSFP +PN P YPW+QI+H
Sbjct: 116 ARDLHVPRVVFSPSGAFALSVSYSLWRDAPQNDNPEDPNGVVSFPNLPNSPFYPWWQITH 175
Query: 181 LYRTLKEGDPDWDLHRSNMMANKTSWGIVFNSFAELERVYIDHMKKEMGHDRVWAVGPVL 240
L+ + G P+W HR NM+ N SWG+V N+F ELE+VY++H+KKE+GH+RV+AVGPVL
Sbjct: 176 LFHDTERGGPEWKFHRENMLLNIDSWGVVINTFTELEQVYLNHLKKELGHERVFAVGPVL 235
Query: 241 PPDDDLVESMC--RGGSSSVPAHDVLTWLDSRRDESVVYVCFGSRYVLTAKQIHELAAAL 298
P + + RGG+S+V HD++ WLD+R SVVYVCFGSR LT+ Q+ L AL
Sbjct: 236 PIQTGSISTKPEERGGNSTVSRHDIMEWLDARDKGSVVYVCFGSRTFLTSSQMEVLTRAL 295
Query: 299 EKTDVDFVYCVREPDERHASQDCGVLPDGFEDRVAGRGYVIRGWSQQVAILRHKAVGAFL 358
E + V+FV VR P++ H +++ G +P GF DRV GRG+VI GW+ Q+ IL H+AVGAF+
Sbjct: 296 EISGVNFVLSVRVPEKGHVAKEHGTVPRGFSDRVKGRGFVIEGWAPQLVILSHRAVGAFV 355
Query: 359 THCGWNSVLEGVSAGVVMLTWPMDADQYTNAQLLVDQLGVGIRVGEGTRNIPESDELARL 418
+HCGWNSV+EG+ +GV MLTWPM ADQYTNA+LLVD+LGV +R EG + IPE+ EL +
Sbjct: 356 SHCGWNSVVEGLISGVAMLTWPMGADQYTNAKLLVDELGVAVRAAEGEKVIPEASELGKR 415
Query: 419 LAQSVDGPRRERLKARELSGAALSAVVKGGSSDRDLNDFIKRINELK 465
+ +++ G +ER+KA L AL A+ GGSS R+L+ +K ++E++
Sbjct: 416 IEEAL-GRTKERVKAEMLRDDALLAIGNGGSSQRELDALVKLLSEVQ 461
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|216296858|gb|ACJ72162.1| UGT5 [Pueraria montana var. lobata] | Back alignment and taxonomy information |
|---|
Score = 511 bits (1315), Expect = e-142, Method: Compositional matrix adjust.
Identities = 246/466 (52%), Positives = 339/466 (72%), Gaps = 11/466 (2%)
Query: 1 MLPAGAHILVYPFPTSGHIIPLLDLTNRLLTLGLNVTVLITQNNLPLLDSLNANHPSTSL 60
M A H+L YPFP+SGH+IPLLD T L++ G+ VT+L+ P ++L + S L
Sbjct: 1 MSTARTHVLAYPFPSSGHVIPLLDFTKALVSRGVQVTLLVA----PYNENLVPKNYSPLL 56
Query: 61 QSLVLPQPKWPAGSPATRLLKFMRVLRELHYPALLDWFKSHPSPPVAILSDFFLGWTQGL 120
Q+L+LP+P +P RL+ + +R+ HYP ++DW K+ P+P AI+SDFFLGWT L
Sbjct: 57 QTLLLPEPHFP-NPKQNRLVALVTFMRQHHYPVIVDWAKAQPTPS-AIISDFFLGWTHLL 114
Query: 121 AAELGLPRVVFSPSGAFALSVSFAMWTDLPTNDDPDNVDALVSFPRVPNCPVYPWYQISH 180
A +L +PR+VFSPSGAFALSVS+++W D P ND+P++ +++VSFP +PN P+YPW+Q++H
Sbjct: 115 ARDLHVPRLVFSPSGAFALSVSYSLWRDAPQNDNPEDPNSVVSFPNLPNSPIYPWWQMTH 174
Query: 181 LYRTLKEGDPDWDLHRSNMMANKTSWGIVFNSFAELERVYIDHMKKEMGHDRVWAVGPVL 240
L+R + G P+W+ HR NM+ N WG+VFN+F ELERVY++HMKKE+ H+RVWAVGPVL
Sbjct: 175 LFRENERGGPEWEFHRENMLFNIDPWGVVFNTFTELERVYLNHMKKELNHERVWAVGPVL 234
Query: 241 PPDDDLVESMCRGGSSSVPAHDVLTWLDSRRDESVVYVCFGSRYVLTAKQIHELAAALEK 300
P + E RGG+S+V HD++ WLDSR + SV+YVCFGSR LT+ Q+ L LE
Sbjct: 235 PIQNGSTEPEERGGNSTVSRHDIMEWLDSRDEGSVIYVCFGSRTFLTSSQMEVLTRGLEL 294
Query: 301 TDVDFVYCVREPDERHASQDCGVLPDGFEDRVAGRGYVIRGWSQQVAILRHKAVGAFLTH 360
+ V+F+ VR PDERH +++ G +P GF DRV GRG++I GW+ Q+ IL H+AVGAFLTH
Sbjct: 295 SGVNFILSVRVPDERHVAKEHGKVPCGFSDRVRGRGFIIEGWAPQLVILSHRAVGAFLTH 354
Query: 361 CGWNSVLEGVSAGVVMLTWPMDADQYTNAQLLVDQLGVGIRVGEGTRNIPESDELARLLA 420
CGWNSVLEG+ +GVVMLTWPM ADQYT +LLVDQLGV +R EG + +PE+ EL + +
Sbjct: 355 CGWNSVLEGLVSGVVMLTWPMGADQYT--KLLVDQLGVAVRAAEGEK-VPEASELGKRIE 411
Query: 421 QSVDGPRRERLKARELSGAALSAV-VKGGSSDRDLNDFIKRINELK 465
+++ G +ER KA +L AL A+ GGSS RDL+ +K +NE++
Sbjct: 412 KAL-GRTKERAKAEKLRDDALRAIGNNGGSSQRDLDALVKLLNEVE 456
|
Source: Pueraria montana var. lobata Species: Pueraria montana Genus: Pueraria Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255547075|ref|XP_002514595.1| UDP-glucosyltransferase, putative [Ricinus communis] gi|223546199|gb|EEF47701.1| UDP-glucosyltransferase, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 484 bits (1247), Expect = e-134, Method: Compositional matrix adjust.
Identities = 248/472 (52%), Positives = 317/472 (67%), Gaps = 21/472 (4%)
Query: 4 AGAHILVYPFPTSGHIIPLLDLTNRLLTLGLNVTVLITQNNLPLLDSLNANHPSTSLQSL 63
A HILV+PFP GH+IPLLDLT +L GL +T+L+T NL L L + HPS +++L
Sbjct: 8 AETHILVFPFPAQGHMIPLLDLTRKLAVHGLTITILVTPKNLSFLHPLLSTHPS--IETL 65
Query: 64 VLP---QPKWPAGS------PATRLLKFMRVLRELHYPALLDWFKSHPSPPVAILSDFFL 114
V P P P+G PA +R L L+ P LL WF SHPSPPVAI+SD FL
Sbjct: 66 VFPFPAHPLIPSGVENNKDLPAECTPVLIRALGGLYDP-LLHWFISHPSPPVAIISDMFL 124
Query: 115 GWTQGLAAELGLPRVVFSPSGAFALSVSFAMWTDLPTNDDPDNVDALVSFPRVPNCPVYP 174
GWTQ LA++L + R+VFSPSGA ALS+ +++W D+P N + +VSF R+PNCP YP
Sbjct: 125 GWTQNLASQLNIRRIVFSPSGAMALSIIYSLWRDMPRR----NQNEVVSFSRIPNCPNYP 180
Query: 175 WYQISHLYRTLKEGDPDWDLHRSNMMANKTSWGIVFNSFAELERVYIDHMKKEMGHDRVW 234
W QIS +YR+ E D +W+ + + AN SWG+V NSF ELE +Y+D+ KKE+G D VW
Sbjct: 181 WRQISPIYRSYIENDTNWEFIKDSFRANLVSWGLVVNSFTELEEIYLDYFKKELGSDHVW 240
Query: 235 AVGPVLPPDDDLVESMC-RGGSSSVPAHDVLTWLDSRRDESVVYVCFGSRYVLTAKQIHE 293
AVGP+LPP D + RGG SSVP HDV+ WLD+ D VVYVCFGS+ LT QI E
Sbjct: 241 AVGPLLPPHHDSISRQSERGGPSSVPVHDVMAWLDTCEDHRVVYVCFGSQTWLTKDQIEE 300
Query: 294 LAAALEKTDVDFVYCVREPDERHASQDCGVLPDGFEDRVAGRGYVIRGWSQQVAILRHKA 353
LA +LE + V+F++CV+E H + V+P GFEDRVAGRG VIRGW QV IL H A
Sbjct: 301 LALSLEMSKVNFIWCVKE----HINGKYSVIPSGFEDRVAGRGLVIRGWVPQVLILSHPA 356
Query: 354 VGAFLTHCGWNSVLEGVSAGVVMLTWPMDADQYTNAQLLVDQLGVGIRVGEGTRNIPESD 413
VGAFLTHCGWNSVLEG+ A V ML WPM ADQ+ NA+LLVD+L V +RV EG + +P SD
Sbjct: 357 VGAFLTHCGWNSVLEGLVAAVPMLAWPMGADQFVNARLLVDELQVAVRVCEGAKTVPNSD 416
Query: 414 ELARLLAQSVDGPRRERLKARELSGAALSAVVKGGSSDRDLNDFIKRINELK 465
ELAR++ +SV R ER +A++L A+ + G S +D + +K + LK
Sbjct: 417 ELARVIMESVSENRVEREQAKKLRRVAMDTIKDRGRSMKDFDGLVKNLFRLK 468
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|387135288|gb|AFJ53025.1| UDP-glycosyltransferase 1 [Linum usitatissimum] | Back alignment and taxonomy information |
|---|
Score = 479 bits (1233), Expect = e-132, Method: Compositional matrix adjust.
Identities = 262/469 (55%), Positives = 340/469 (72%), Gaps = 17/469 (3%)
Query: 4 AGAHILVYPFPTSGHIIPLLDLTNRLLTLGLNVTVLITQNNLPLLDSLNANHPSTS-LQS 62
AGAH+LVYP+P +GHIIP+LDLT+ LL+ GL VT+L+T +NL LL S +HP+T+ L
Sbjct: 6 AGAHVLVYPYPAAGHIIPILDLTHHLLSRGLTVTLLLTPSNLNLLHSFRLSHPTTTQLNE 65
Query: 63 LVLPQPKWPAGSPATRLLK---FMRVLRELHYPALLDWFKSHP---SPPVAILSDFFLGW 116
L+LP P P+ S TR + M+ R HYP +L FKS P +PP AI++DFFLGW
Sbjct: 66 LILPAPD-PSPSGPTRPIGPIVNMKYFRAHHYPLILQQFKSEPWTTNPPSAIIADFFLGW 124
Query: 117 TQGLAAELGLPRVVFSPSGAFALSVSFAMWTDLPTNDDPDNVDALVSFPRVPNCPVYPWY 176
T LA+ELG+ V+FSPSGAFA+SV+ ++W D P P N + +++FP VPN P YPW
Sbjct: 125 TNQLASELGIRHVLFSPSGAFAISVATSLWRDEPLC--PINDEEIITFPTVPNSPSYPWR 182
Query: 177 QISHLYRTLKEGDPDWDLHRSNMMANKTSWGIVFNSFAELERVYIDHMKKEMGHDRVWAV 236
QIS +YR L++GDPD ++ R +AN +SWGIV N+FA +E+ YIDH+K+E H RVWA+
Sbjct: 183 QISFIYRMLEKGDPDREIFRDCFLANLSSWGIVINTFARIEQPYIDHLKRESSHSRVWAM 242
Query: 237 GPVLPPDDDLVESMCRGGSSSVPAHDVLTWLDSRRDESVVYVCFGSRYVLTAKQIHELAA 296
GP+LPP S RGG+SS+P+ + TWLDSR D SVVY+CFGSR LT +Q+ L+A
Sbjct: 243 GPLLPPPSGGGSSGDRGGASSIPSDQIRTWLDSRPDRSVVYICFGSRTSLTDEQMKPLSA 302
Query: 297 ALEK-TDVDFVYCVREPDERHASQDCGVLPDGFEDRVAGRGYVIRGWSQQVAILRHKAVG 355
ALEK T V FV+CVR+ E ++ LP+ F+ RV GRG VIRGW+ QV ILRHKAVG
Sbjct: 303 ALEKRTGVSFVWCVRQSTEAGSAS----LPEEFDTRVLGRGLVIRGWAPQVEILRHKAVG 358
Query: 356 AFLTHCGWNSVLEGVSAGVVMLTWPMDADQYTNAQLLVDQLGVGIRVGEGTRNIPESDEL 415
AFLTHCGWNS +EG++AGVVMLTWPM ADQY+NAQLLVDQL VGIRVGE T IP+ +EL
Sbjct: 359 AFLTHCGWNSTMEGLTAGVVMLTWPMGADQYSNAQLLVDQLRVGIRVGEDTEVIPDEEEL 418
Query: 416 ARLLAQSV--DGPRRERLKARELSGAALSAVVKGGSSDRDLNDFIKRIN 462
R+L ++ G ER +A EL AA A+V+GGSS DL++F++++N
Sbjct: 419 GRVLEEAAREGGVLSERERAEELRTAARDALVEGGSSFTDLDEFVEKLN 467
|
Source: Linum usitatissimum Species: Linum usitatissimum Genus: Linum Family: Linaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|387135290|gb|AFJ53026.1| UDP-glycosyltransferase 1 [Linum usitatissimum] | Back alignment and taxonomy information |
|---|
Score = 475 bits (1222), Expect = e-131, Method: Compositional matrix adjust.
Identities = 256/481 (53%), Positives = 336/481 (69%), Gaps = 21/481 (4%)
Query: 4 AGAHILVYPFPTSGHIIPLLDLTNRLLTLGLNVTVLITQNNLPLLDSLNANHPSTSLQSL 63
+GAH+LVYP+P +GHIIP+LDLT+ LL+ GL VT+L+ NL LL S +H +T L L
Sbjct: 10 SGAHVLVYPYPAAGHIIPILDLTHYLLSRGLTVTLLLIPCNLNLLHSFRLSHQTTQLNEL 69
Query: 64 VLPQPKWPAGSPATRL--LKFMRVLRELHYPALLDWFKSHP---SPPVAILSDFFLGWTQ 118
+LP P P + + M+ R HYP LL FKSHP +PP AI++DFFLGWT
Sbjct: 70 ILPAPDPSPPGPTLPIGPIVNMKYFRAHHYPLLLQQFKSHPWTINPPTAIIADFFLGWTN 129
Query: 119 GLAAELGLPRVVFSPSGAFALSVSFAMWTDLPTNDDPDNVDALVSFPRVPNCPVYPWYQI 178
LA+E+ + V+FSPSGAF +SV+ ++W D P P N +++FP VPN P YPW QI
Sbjct: 130 QLASEMSIRHVLFSPSGAFGISVATSLWRDEPPF--PINDQEIITFPTVPNSPSYPWRQI 187
Query: 179 SHLYRTLKEGDPDWDLHRSNMMANKTSWGIVFNSFAELERVYIDHMKKEMG-HDRVWAVG 237
S +YR L++G+PD ++ R +AN +SWG V N+FA +E+ YIDH+K+E H RVWAVG
Sbjct: 188 SFIYRMLQKGNPDREIFRDCFLANLSSWGTVINTFARIEKPYIDHLKRESSSHGRVWAVG 247
Query: 238 PVL--PPDDDLVESMCRGGSSSVPAHDVLTWLDSRRDESVVYVCFGSRYVLTAKQIHELA 295
P+L P + RGG+SS+P+ ++TWLDSR + SVVY+CFGSR LT +Q+ L+
Sbjct: 248 PLLRPPSSGGGGGNSDRGGASSIPSDQIITWLDSRSERSVVYICFGSRTSLTEEQLKRLS 307
Query: 296 AALEK-TDVDFVYCVREPDERHASQDCGVLPDGFEDRVAGRGYVIRGWSQQVAILRHKAV 354
AALEK T V FV+CVR+ E +LP+ F+ RV+GRG VIRGW+ QV ILRHKAV
Sbjct: 308 AALEKRTGVSFVWCVRQSTE----AGSALLPEEFDTRVSGRGLVIRGWAPQVEILRHKAV 363
Query: 355 GAFLTHCGWNSVLEGVSAGVVMLTWPMDADQYTNAQLLVDQLGVGIRVGEGTRNIPESDE 414
GAFLTHCGWNS +EG++AGVVMLTWPM ADQY+NAQLLVDQL VGIRVGE T IP+ E
Sbjct: 364 GAFLTHCGWNSTMEGLTAGVVMLTWPMGADQYSNAQLLVDQLRVGIRVGEDTEVIPDEKE 423
Query: 415 LARLLAQSV--DGPRRERLKARELSGAALSAVVKGGSSDRDLNDFIKRINELKSGKNLTA 472
L R+L ++V G +R +A+EL AA AVV+GGSS +DL++F+++IN GK +
Sbjct: 424 LGRVLEEAVAKGGMWWKRERAKELRTAARDAVVEGGSSFKDLDEFVEKIN----GKTTNS 479
Query: 473 V 473
V
Sbjct: 480 V 480
|
Source: Linum usitatissimum Species: Linum usitatissimum Genus: Linum Family: Linaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297839263|ref|XP_002887513.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein [Arabidopsis lyrata subsp. lyrata] gi|297333354|gb|EFH63772.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
Score = 469 bits (1207), Expect = e-129, Method: Compositional matrix adjust.
Identities = 241/475 (50%), Positives = 319/475 (67%), Gaps = 26/475 (5%)
Query: 3 PAGAHILVYPFPTSGHIIPLLDLTNRLLTLG---LNVTVLITQNNLPLLDSLNANHPSTS 59
P H+L++PFP GH+IPLLD T+RL G L +TVL+T NLP L L + ++
Sbjct: 10 PTKTHVLIFPFPAQGHMIPLLDFTHRLALRGGAALTITVLVTPKNLPFLSPLLSA--VSN 67
Query: 60 LQSLVLP---QPKWPAGS------PATRLLKFMRVLRELHYPALLDWFKSHPSPPVAILS 110
+++L+LP P P+G P + + L LH P LL W SHPSPPVAI+S
Sbjct: 68 IETLILPFPSHPSIPSGVENVQDLPPSGFPLMIHALGNLHAP-LLSWITSHPSPPVAIVS 126
Query: 111 DFFLGWTQGLAAELGLPRVVFSPSGAFALSVSFAMWTDLPTNDDPDNVDALVSFPRVPNC 170
DFFLGWT LG+PR FSPS A + +W ++PT + D+ + ++ FP++PNC
Sbjct: 127 DFFLGWTN----NLGIPRFDFSPSAAITCCILNTLWIEMPTKINEDDDNEILQFPKIPNC 182
Query: 171 PVYPWYQISHLYRTLKEGDPDWDLHRSNMMANKTSWGIVFNSFAELERVYIDHMKKEMGH 230
P YP+ QIS LYR+ GDP W+ R + N SWG+V NSF +E VY++H+K+EMGH
Sbjct: 183 PKYPFNQISSLYRSYVHGDPAWEFIRDSFRDNAASWGLVVNSFTAMEGVYLEHLKREMGH 242
Query: 231 DRVWAVGPVLPPDDDLVESMCRGGSSSVPAHDVLTWLDSRRDESVVYVCFGSRYVLTAKQ 290
D VWAVGP+LP D RGG +SV V++WLD+R D+ VVYVCFGS+ VLT +Q
Sbjct: 243 DCVWAVGPILPLSDG-----NRGGPTSVSVDHVMSWLDAREDDHVVYVCFGSQTVLTKEQ 297
Query: 291 IHELAAALEKTDVDFVYCVREPDERHASQDCGVLPDGFEDRVAGRGYVIRGWSQQVAILR 350
LA+ LEK+ V F++ V+EP E + + G + DGF+DRVAGRG VIRGW+ QVA+LR
Sbjct: 298 TLALASGLEKSGVHFIWAVKEPVEGESPR--GNILDGFDDRVAGRGLVIRGWAPQVAVLR 355
Query: 351 HKAVGAFLTHCGWNSVLEGVSAGVVMLTWPMDADQYTNAQLLVDQLGVGIRVGEGTRNIP 410
H+AVGAFLTHCGWNSV+E V AGV+MLTWPM ADQYT+A L+VD+L VG+R EG +P
Sbjct: 356 HRAVGAFLTHCGWNSVIEAVVAGVLMLTWPMRADQYTDASLVVDELKVGVRACEGPDTVP 415
Query: 411 ESDELARLLAQSVDGPRRERLKARELSGAALSAVVKGGSSDRDLNDFIKRINELK 465
+ DELAR+ A SV G + ER+KA EL AAL A+ + GSS +DL+ FI+ + L+
Sbjct: 416 DPDELARVFADSVTGKQTERIKAVELRKAALDAIQERGSSVKDLDGFIQHVVNLR 470
|
Source: Arabidopsis lyrata subsp. lyrata Species: Arabidopsis lyrata Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 473 | ||||||
| TAIR|locus:2031566 | 473 | UGT89B1 "UDP-glucosyl transfer | 0.951 | 0.951 | 0.481 | 5.8e-114 | |
| TAIR|locus:2198791 | 435 | AT1G06000 [Arabidopsis thalian | 0.536 | 0.583 | 0.458 | 1.2e-69 | |
| UNIPROTKB|Q9AT54 | 476 | togt1 "Phenylpropanoid:glucosy | 0.737 | 0.733 | 0.382 | 8.4e-58 | |
| TAIR|locus:2053618 | 484 | UGT73B5 "UDP-glucosyl transfer | 0.744 | 0.727 | 0.347 | 5.4e-57 | |
| TAIR|locus:2053669 | 484 | UGT73B4 "UDP-glycosyltransfera | 0.748 | 0.731 | 0.346 | 6.9e-57 | |
| TAIR|locus:2142654 | 465 | AT5G03490 [Arabidopsis thalian | 0.619 | 0.630 | 0.408 | 3.3e-56 | |
| TAIR|locus:505006556 | 488 | UGT73B1 "UDP-glucosyl transfer | 0.739 | 0.717 | 0.339 | 6.1e-56 | |
| TAIR|locus:505006555 | 483 | UGT73B2 "UDP-glucosyltransfera | 0.731 | 0.716 | 0.345 | 5.4e-55 | |
| TAIR|locus:2182300 | 488 | AT5G12890 [Arabidopsis thalian | 0.938 | 0.909 | 0.323 | 5.5e-54 | |
| TAIR|locus:2040570 | 495 | DOGT1 "don-glucosyltransferase | 0.957 | 0.915 | 0.309 | 6.3e-53 |
| TAIR|locus:2031566 UGT89B1 "UDP-glucosyl transferase 89B1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1124 (400.7 bits), Expect = 5.8e-114, P = 5.8e-114
Identities = 231/480 (48%), Positives = 304/480 (63%)
Query: 3 PAGAHILVYPFPTSGHIIPXXXXXXXXXXXXXXXXXXX---XQNNLPLLDSLNANHPSTS 59
P H+L++PFP GH+IP NLP L L + +
Sbjct: 10 PTKTHVLIFPFPAQGHMIPLLDFTHRLALRGGAALKITVLVTPKNLPFLSPLLS--AVVN 67
Query: 60 LQSLVLP---QPKWPAGS------PATRLLKFMRVLRELHYPALLDWFKSHPSPPVAILS 110
++ L+LP P P+G P + + L LH P L+ W SHPSPPVAI+S
Sbjct: 68 IEPLILPFPSHPSIPSGVENVQDLPPSGFPLMIHALGNLHAP-LISWITSHPSPPVAIVS 126
Query: 111 DFFLGWTQGLAAELGLPRVVFSPSGAFALSVSFAMWTDLPT--NDDPDNVDALVSFPRVP 168
DFFLGWT+ L G+PR FSPS A + +W ++PT N+D DN ++ FP++P
Sbjct: 127 DFFLGWTKNL----GIPRFDFSPSAAITCCILNTLWIEMPTKINEDDDN--EILHFPKIP 180
Query: 169 NCPVYPWYQISHLYRTLKEGDPDWDLHRSNMMANKTSWGIVFNSFAELERVYIDHMKKEM 228
NCP Y + QIS LYR+ GDP W+ R + N SWG+V NSF +E VY++H+K+EM
Sbjct: 181 NCPKYRFDQISSLYRSYVHGDPAWEFIRDSFRDNVASWGLVVNSFTAMEGVYLEHLKREM 240
Query: 229 GHDRVWAVGPVLPPDDDLVESMCRGGSSSVPAHDVLTWLDSRRDESVVYVCFGSRYVLTA 288
GHDRVWAVGP++P D RGG +SV V++WLD+R D VVYVCFGS+ VLT
Sbjct: 241 GHDRVWAVGPIIPLSGDN-----RGGPTSVSVDHVMSWLDAREDNHVVYVCFGSQVVLTK 295
Query: 289 KQIHELAAALEKTDVDFVYCVREPDERHASQDCGVLPDGFEDRVAGRGYVIRGWSQQVAI 348
+Q LA+ LEK+ V F++ V+EP E+ +++ G + DGF+DRVAGRG VIRGW+ QVA+
Sbjct: 296 EQTLALASGLEKSGVHFIWAVKEPVEKDSTR--GNILDGFDDRVAGRGLVIRGWAPQVAV 353
Query: 349 LRHKAVGAFLTHCGWNSVLEGVSAGVVMLTWPMDADQYTNAQLLVDQLGVGIRVGEGTRN 408
LRH+AVGAFLTHCGWNSV+E V AGV+MLTWPM ADQYT+A L+VD+L VG+R EG
Sbjct: 354 LRHRAVGAFLTHCGWNSVVEAVVAGVLMLTWPMRADQYTDASLVVDELKVGVRACEGPDT 413
Query: 409 IPESDELARLLAQSVDGPRRERLKARELSGAALSAVVKGGSSDRDLNDFIKRINELKSGK 468
+P+ DELAR+ A SV G + ER+KA EL AAL A+ + GSS DL+ FI+ + L K
Sbjct: 414 VPDPDELARVFADSVTGNQTERIKAVELRKAALDAIQERGSSVNDLDGFIQHVVSLGLNK 473
|
|
| TAIR|locus:2198791 AT1G06000 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 581 (209.6 bits), Expect = 1.2e-69, Sum P(2) = 1.2e-69
Identities = 121/264 (45%), Positives = 171/264 (64%)
Query: 201 ANKTSWGIVFNSFAELERVYIDHMKKE-MGHDRVWAVGPVLPPDDDLVESMCRGGSSSVP 259
A S+G+V NSF +LE +++ +K + H R+W VGP+LP + RGG SS+P
Sbjct: 171 ATTESYGLVINSFYDLEPEFVETVKTRFLNHHRIWTVGPLLP----FKAGVDRGGQSSIP 226
Query: 260 AHDVLTWLDS-RRDESVVYVCFGSRYVLTAKQIHELAAALEKTDVDFVYCVREPDERHAS 318
V WLDS D SVVYV FGS+ LTA+Q LAAALEK+ V F++ VR+ ++ S
Sbjct: 227 PAKVSAWLDSCPEDNSVVYVGFGSQIRLTAEQTAALAAALEKSSVRFIWAVRDAAKKVNS 286
Query: 319 QDCGV----LPDGFEDRVAGRGYVIRGWSQQVAILRHKAVGAFLTHCGWNSVLEGVSAGV 374
D V +P GFE+RV +G VIRGW+ Q IL H+AVG++LTH GW SVLEG+ GV
Sbjct: 287 SDNSVEEDVIPAGFEERVKEKGLVIRGWAPQTMILEHRAVGSYLTHLGWGSVLEGMVGGV 346
Query: 375 VMLTWPMDADQYTNAQLLVDQLGVGIRVGEGTRNIPESDELARLLAQSVDGPRRERLKAR 434
++L WPM AD + N L+VD+L +RVGE ++P+SD+LAR+LA+S ER+
Sbjct: 347 MLLAWPMQADHFFNTTLIVDKLRAAVRVGENRDSVPDSDKLARILAESAREDLPERVTLM 406
Query: 435 ELSGAALSAVVKGGSSDRDLNDFI 458
+L A+ A+ +GGSS ++L++ +
Sbjct: 407 KLREKAMEAIKEGGSSYKNLDELV 430
|
|
| UNIPROTKB|Q9AT54 togt1 "Phenylpropanoid:glucosyltransferase 1" [Nicotiana tabacum (taxid:4097)] | Back alignment and assigned GO terms |
|---|
Score = 594 (214.2 bits), Expect = 8.4e-58, P = 8.4e-58
Identities = 143/374 (38%), Positives = 216/374 (57%)
Query: 105 PVAILSDFFLGWTQGLAAELGLPRVVFSPSGAFALSVSFAMWTDLPTNDDPDNVDALVSF 164
P ++SD FL WT AA+ +PR+VF + FAL V ++ + P + + + V
Sbjct: 113 PDCLISDMFLPWTTDTAAKFNIPRIVFHGTSFFALCVENSVRLNKPFKNVSSDSETFV-V 171
Query: 165 PRVPNCPVYPWYQISHLYRTLKEGDPDWDLHRSNMMANKTSWGIVFNSFAELERVYIDHM 224
P +P+ Q+S R+ +E + ++ ++ S+G+VFNSF ELE Y++H
Sbjct: 172 PDLPHEIKLTRTQVSPFERSGEETAMT-RMIKTVRESDSKSYGVVFNSFYELETDYVEHY 230
Query: 225 KKEMGHDRVWAVGPVLPPDDDLVESMCRGGSSSVPAHDVLTWLDSRRDESVVYVCFGSRY 284
K +G R WA+GP+ + D+ + RG SS+ H+ L WLDS++ SVVYVCFGS
Sbjct: 231 TKVLGR-RAWAIGPLSMCNRDIEDKAERGKKSSIDKHECLKWLDSKKPSSVVYVCFGSVA 289
Query: 285 VLTAKQIHELAAALEKTDVDFVYCVR-EPDERHASQDCGVLPDGFEDRVAGRGYVIRGWS 343
TA Q+HELA +E + +F++ VR E D ++D LP+GFE+R +G +IRGW+
Sbjct: 290 NFTASQLHELAMGIEASGQEFIWVVRTELD----NEDW--LPEGFEERTKEKGLIIRGWA 343
Query: 344 QQVAILRHKAVGAFLTHCGWNSVLEGVSAGVVMLTWPMDADQYTNAQLLVDQLGVGIRVG 403
QV IL H++VGAF+THCGWNS LEGVS GV M+TWP+ A+Q+ N +L+ + L G VG
Sbjct: 344 PQVLILDHESVGAFVTHCGWNSTLEGVSGGVPMVTWPVFAEQFFNEKLVTEVLKTGAGVG 403
Query: 404 ---------EGTRNIPESDELARLL-AQSVDGPRRERLKA-RELSGAALSAVVKGGSSDR 452
EG + + + R++ ++ DG R R KA +E+ A A+ +GGSS
Sbjct: 404 SIQWKRSASEGVKREAIAKAIKRVMVSEEADG-FRNRAKAYKEM---ARKAIEEGGSSYT 459
Query: 453 DLNDFIKRINELKS 466
L ++ I+ S
Sbjct: 460 GLTTLLEDISTYSS 473
|
|
| TAIR|locus:2053618 UGT73B5 "UDP-glucosyl transferase 73B5" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 549 (198.3 bits), Expect = 5.4e-57, Sum P(2) = 5.4e-57
Identities = 128/368 (34%), Positives = 201/368 (54%)
Query: 105 PVAILSDFFLGWTQGLAAELGLPRVVFSPSGAFALSVSFAMWTDLPTNDDPDNVDALVSF 164
P A+++D F W A +LG+PR+VF + F+L S+ M P + V
Sbjct: 126 PSALVADMFFPWATESAEKLGVPRLVFHGTSFFSLCCSYNMRIHKPHKKVATSSTPFV-I 184
Query: 165 PRVPNCPVYPWYQISHLYRTLKEGDPDWDLHRSNMMANKTSWGIVFNSFAELERVYIDHM 224
P +P V Q + KE P + + S+G++ NSF ELE Y D
Sbjct: 185 PGLPGDIVITEDQAN----VAKEETPMGKFMKEVRESETNSFGVLVNSFYELESAYADFY 240
Query: 225 KKEMGHDRVWAVGPVLPPDDDLVESMCRGGSSSVPAHDVLTWLDSRRDESVVYVCFGSRY 284
+ + R W +GP+ + +L E RG +++ + L WLDS+ SVVY+ FGS
Sbjct: 241 RSFVAK-RAWHIGPLSLSNRELGEKARRGKKANIDEQECLKWLDSKTPGSVVYLSFGSGT 299
Query: 285 VLTAKQIHELAAALEKTDVDFVYCVREPDERHASQDCGVLPDGFEDRVAGRGYVIRGWSQ 344
T Q+ E+A LE + F++ VR+ + + +++ LP+GF++R G+G +I GW+
Sbjct: 300 NFTNDQLLEIAFGLEGSGQSFIWVVRKNENQGDNEEW--LPEGFKERTTGKGLIIPGWAP 357
Query: 345 QVAILRHKAVGAFLTHCGWNSVLEGVSAGVVMLTWPMDADQYTNAQLLVDQLGVGIRVGE 404
QV IL HKA+G F+THCGWNS +EG++AG+ M+TWPM A+Q+ N +LL L +G+ VG
Sbjct: 358 QVLILDHKAIGGFVTHCGWNSAIEGIAAGLPMVTWPMGAEQFYNEKLLTKVLRIGVNVG- 416
Query: 405 GTRNIPESDELARLLAQS-----VDGPRRE--RLKARELSGAALSAVVKGGSSDRDLNDF 457
T + + ++R + + G + E RL A++L A +AV +GGSS D+N F
Sbjct: 417 ATELVKKGKLISRAQVEKAVREVIGGEKAEERRLWAKKLGEMAKAAVEEGGSSYNDVNKF 476
Query: 458 IKRINELK 465
++ +N K
Sbjct: 477 MEELNGRK 484
|
|
| TAIR|locus:2053669 UGT73B4 "UDP-glycosyltransferase 73B4" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 549 (198.3 bits), Expect = 6.9e-57, Sum P(2) = 6.9e-57
Identities = 128/369 (34%), Positives = 203/369 (55%)
Query: 105 PVAILSDFFLGWTQGLAAELGLPRVVFSPSGAFALSVSFAMWTDLPTNDDPDNVDALVSF 164
P A+++D F W A ++G+PR+VF + +FAL S+ M P + V
Sbjct: 123 PSALVADMFFPWATESAEKIGVPRLVFHGTSSFALCCSYNMRIHKPHKKVASSSTPFV-I 181
Query: 165 PRVPNCPVYPWYQISHLYRTLKEGDPDWDLHRSNMMANKTSWGIVFNSFAELERVYIDHM 224
P +P V Q + E P + + +S+G++ NSF ELE Y D
Sbjct: 182 PGLPGDIVITEDQAN----VTNEETPFGKFWKEVRESETSSFGVLVNSFYELESSYADFY 237
Query: 225 KKEMGHDRVWAVGPVLPPDDDLVESMCRGGSSSVPAHDVLTWLDSRRDESVVYVCFGSRY 284
+ + + W +GP+ + + E RG +++ + L WLDS+ SVVY+ FGS
Sbjct: 238 RSFVAK-KAWHIGPLSLSNRGIAEKAGRGKKANIDEQECLKWLDSKTPGSVVYLSFGSGT 296
Query: 285 VLTAKQIHELAAALEKTDVDFVYCVREPDERHAS-QDCGVLPDGFEDRVAGRGYVIRGWS 343
L +Q+ E+A LE + +F++ V + + + + ++ LP GFE+R G+G +IRGW+
Sbjct: 297 GLPNEQLLEIAFGLEGSGQNFIWVVSKNENQVGTGENEDWLPKGFEERNKGKGLIIRGWA 356
Query: 344 QQVAILRHKAVGAFLTHCGWNSVLEGVSAGVVMLTWPMDADQYTNAQLLVDQLGVGIRVG 403
QV IL HKA+G F+THCGWNS LEG++AG+ M+TWPM A+Q+ N +LL L +G+ VG
Sbjct: 357 PQVLILDHKAIGGFVTHCGWNSTLEGIAAGLPMVTWPMGAEQFYNEKLLTKVLRIGVNVG 416
Query: 404 EGTRNIPESDELARLLAQS-----VDGPRRE--RLKARELSGAALSAVVKGGSSDRDLND 456
T + + ++R + + G + E RL+A+EL A +AV +GGSS D+N
Sbjct: 417 -ATELVKKGKLISRAQVEKAVREVIGGEKAEERRLRAKELGEMAKAAVEEGGSSYNDVNK 475
Query: 457 FIKRINELK 465
F++ +N K
Sbjct: 476 FMEELNGRK 484
|
|
| TAIR|locus:2142654 AT5G03490 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 579 (208.9 bits), Expect = 3.3e-56, P = 3.3e-56
Identities = 129/316 (40%), Positives = 190/316 (60%)
Query: 156 DNVDALVSFPRVP--NCPVYPWYQISHLYRTLKEG--DPDWDLHR-SNMMANKTSWGIVF 210
+N+D + S + + P P ++ HL ++ P DL + N S+G VF
Sbjct: 166 ENIDLIKSTDPIHLLDLPRAPIFKEEHLPSIVRRSLQTPSPDLESIKDFSMNLLSYGSVF 225
Query: 211 NSFAELERVYIDHMKKEMGHDRVWAVGPVLPPDDDLVESMCRGGSSSVPAHDVLTWLDSR 270
NS LE Y+ ++K+ MGHDRV+ +GP+ + S + S SV +L+WLD
Sbjct: 226 NSSEILEDDYLQYVKQRMGHDRVYVIGPLCS-----IGSGLKSNSGSVDP-SLLSWLDGS 279
Query: 271 RDESVVYVCFGSRYVLTAKQIHELAAALEKTDVDFVYCVREPDERHASQDCGVLPDGFED 330
+ SV+YVCFGS+ LT Q LA LEK+ FV+ V++ +PDGFED
Sbjct: 280 PNGSVLYVCFGSQKALTKDQCDALALGLEKSMTRFVWVVKKDP----------IPDGFED 329
Query: 331 RVAGRGYVIRGWSQQVAILRHKAVGAFLTHCGWNSVLEGVSAGVVMLTWPMDADQYTNAQ 390
RV+GRG V+RGW Q+A+LRH AVG FL+HCGWNSVLEG+++G V+L WPM+ADQ+ NA+
Sbjct: 330 RVSGRGLVVRGWVSQLAVLRHVAVGGFLSHCGWNSVLEGITSGAVILGWPMEADQFVNAR 389
Query: 391 LLVDQLGVGIRVGEGTRNIPESDELARLLAQSV-DGPRRERLKARELSGAALSAVVKG-G 448
LLV+ LGV +RV EG +P+SDEL R++A+++ +G R +A E+ +AV + G
Sbjct: 390 LLVEHLGVAVRVCEGGETVPDSDELGRVIAETMGEGGREVAARAEEIRRKTEAAVTEANG 449
Query: 449 SSDRDLNDFIKRINEL 464
SS ++ +K ++
Sbjct: 450 SSVENVQRLVKEFEKV 465
|
|
| TAIR|locus:505006556 UGT73B1 "UDP-glucosyl transferase 73B1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 542 (195.9 bits), Expect = 6.1e-56, Sum P(2) = 6.1e-56
Identities = 126/371 (33%), Positives = 206/371 (55%)
Query: 105 PVAILSDFFLGWTQGLAAELGLPRVVFSPSGAFALSVSFAMWTDLPTNDDPDNVDALVSF 164
P ++ + F W+ +A + G+PR+VF +G F+L S + LP N + ++
Sbjct: 129 PDCLVGNMFFPWSTKVAEKFGVPRLVFHGTGYFSLCASHCI--RLPKNVATSSEPFVI-- 184
Query: 165 PRVPNCPVYPWYQISHLYRTLKEGDPDWDLHRSNMMANKTSWGIVFNSFAELERVYIDHM 224
P +P + Q+ G ++ + + S+G++ NSF ELE+ Y D+
Sbjct: 185 PDLPGDILITEEQVMETEEESVMGR----FMKAIRDSERDSFGVLVNSFYELEQAYSDYF 240
Query: 225 KKEMGHDRVWAVGPVLPPDDDLVESMCRGGSSSVPAHDVLTWLDSRRDESVVYVCFGSRY 284
K + R W +GP+ + E RG +S+ H+ L WLDS++ +SV+Y+ FG+
Sbjct: 241 KSFVAK-RAWHIGPLSLGNRKFEEKAERGKKASIDEHECLKWLDSKKCDSVIYMAFGTMS 299
Query: 285 VLTAKQIHELAAALEKTDVDFVYCVREPDERHASQDCGVLPDGFEDRVAGRGYVIRGWSQ 344
+Q+ E+AA L+ + DFV+ V + +D LP+GFE++ G+G +IRGW+
Sbjct: 300 SFKNEQLIEIAAGLDMSGHDFVWVVNRKGSQVEKEDW--LPEGFEEKTKGKGLIIRGWAP 357
Query: 345 QVAILRHKAVGAFLTHCGWNSVLEGVSAGVVMLTWPMDADQYTNAQLLVDQLGVGIRVGE 404
QV IL HKA+G FLTHCGWNS+LEGV+AG+ M+TWP+ A+Q+ N +L+ L G+ VG
Sbjct: 358 QVLILEHKAIGGFLTHCGWNSLLEGVAAGLPMVTWPVGAEQFYNEKLVTQVLKTGVSVGV 417
Query: 405 GTRNIPESDELARLLAQSVDGPRRE-------RLKARELSGAALSAVVKGGSSDRDLNDF 457
D ++R + V+G RE R +A+EL+ A +AV +GGSSD +++
Sbjct: 418 KKMMQVVGDFISR---EKVEGAVREVMVGEERRKRAKELAEMAKNAVKEGGSSDLEVDRL 474
Query: 458 IKRINELKSGK 468
++ + +K K
Sbjct: 475 MEELTLVKLQK 485
|
|
| TAIR|locus:505006555 UGT73B2 "UDP-glucosyltransferase 73B2" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 535 (193.4 bits), Expect = 5.4e-55, Sum P(2) = 5.4e-55
Identities = 127/368 (34%), Positives = 198/368 (53%)
Query: 105 PVAILSDFFLGWTQGLAAELGLPRVVFSPSGAFALSVSFAMWTDLPTNDDPDNVDALVSF 164
P +++D F W A + +PR+VF +G F+L + + P + + V
Sbjct: 127 PDCLIADMFFPWATEAAGKFNVPRLVFHGTGYFSLCAGYCIGVHKPQKRVASSSEPFV-I 185
Query: 165 PRVPNCPVYPWYQISHLYRTLKEGDPDWDLHRSNMMANKT-SWGIVFNSFAELERVYIDH 223
P +P V QI +G+ D + + ++ S G+V NSF ELE Y D
Sbjct: 186 PELPGNIVITEEQIID-----GDGESDMGKFMTEVRESEVKSSGVVLNSFYELEHDYADF 240
Query: 224 MKKEMGHDRVWAVGPVLPPDDDLVESMCRGGSSSVPAHDVLTWLDSRRDESVVYVCFGSR 283
K + R W +GP+ + E RG +++ + L WLDS++ SV+YV FGS
Sbjct: 241 YKSCV-QKRAWHIGPLSVYNRGFEEKAERGKKANIDEAECLKWLDSKKPNSVIYVSFGSV 299
Query: 284 YVLTAKQIHELAAALEKTDVDFVYCVREP-DERHASQDCGVLPDGFEDRVAGRGYVIRGW 342
+Q+ E+AA LE + F++ VR+ D+R LP+GFE+RV G+G +IRGW
Sbjct: 300 AFFKNEQLFEIAAGLEASGTSFIWVVRKTKDDREEW-----LPEGFEERVKGKGMIIRGW 354
Query: 343 SQQVAILRHKAVGAFLTHCGWNSVLEGVSAGVVMLTWPMDADQYTNAQLLVDQLGVGIRV 402
+ QV IL H+A G F+THCGWNS+LEGV+AG+ M+TWP+ A+Q+ N +L+ L G+ V
Sbjct: 355 APQVLILDHQATGGFVTHCGWNSLLEGVAAGLPMVTWPVGAEQFYNEKLVTQVLRTGVSV 414
Query: 403 GEGTR-NIPESDELAR-----LLAQSVDGPRRE--RLKARELSGAALSAVVKGGSSDRDL 454
G + D ++R + + + G E R +A++L+ A +AV +GGSS DL
Sbjct: 415 GASKHMKVMMGDFISREKVDKAVREVLAGEAAEERRRRAKKLAAMAKAAVEEGGSSFNDL 474
Query: 455 NDFIKRIN 462
N F++ +
Sbjct: 475 NSFMEEFS 482
|
|
| TAIR|locus:2182300 AT5G12890 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 558 (201.5 bits), Expect = 5.5e-54, P = 5.5e-54
Identities = 157/485 (32%), Positives = 237/485 (48%)
Query: 3 PAGAHILVYPFPTSGHIIPXXXXXXXXXXXXX---XXXXXXXQNNLPL-LDSLNANHPST 58
P I+++PF GHIIP N P + + +N P
Sbjct: 6 PRNLRIVMFPFMGQGHIIPFVALALRLEKIMIMNRANKTTISMINTPSNIPKIRSNLPPE 65
Query: 59 SLQSLV-LPQPKWPAGSP-------------ATRLLKFMRVLRELHYPALLDWFKSHPSP 104
S SL+ LP G P LL+ R LRE + K
Sbjct: 66 SSISLIELPFNSSDHGLPHDGENFDSLPYSLVISLLEASRSLREPFRDFMTKILKEEGQS 125
Query: 105 PVAILSDFFLGWTQGLAAELGLPRVVFSPSGAFALSVSFAMWTDLPTNDDPDNVDALVSF 164
V ++ DFFLGW + E+G+ V+FS SGAF L ++W +LP + + L F
Sbjct: 126 SVIVIGDFFLGWIGKVCKEVGVYSVIFSASGAFGLGCYRSIWLNLPHKETKQDQFLLDDF 185
Query: 165 PRVPNCPVYPWYQISHLYRTLKEGDPDWDLHRSNMMANKTSW-GIVFNSFAELERVYIDH 223
P Q++ + +G DW + ++ + + G +FN+ AE++++ + +
Sbjct: 186 PEAGEIEKT---QLNS-FMLEADGTDDWSVFMKKIIPGWSDFDGFLFNTVAEIDQMGLSY 241
Query: 224 MKKEMGHDRVWAVGPVLPPDDDLVESMCRGGSSSVPAHDVLTWLDSRRDESVVYVCFGSR 283
++ G VW VGPVL D V G S+ A V +WLDS+ D SVVYVCFGS
Sbjct: 242 FRRITGVP-VWPVGPVLKSPDKKV-----GSRSTEEA--VKSWLDSKPDHSVVYVCFGSM 293
Query: 284 YVLTAKQIHELAAALEKTDVDFVYCVREPD--ERHASQDC-GVLPDGFEDRV--AGRGYV 338
+ + ELA ALE ++ +F++ VR P E + D G LP+GFE+R+ + RG +
Sbjct: 294 NSILQTHMLELAMALESSEKNFIWVVRPPIGVEVKSEFDVKGYLPEGFEERITRSERGLL 353
Query: 339 IRGWSQQVAILRHKAVGAFLTHCGWNSVLEGVSAGVVMLTWPMDADQYTNAQLLVDQLGV 398
++ W+ QV IL HKA FL+HCGWNS+LE +S GV +L WPM A+Q+ N+ L+ +GV
Sbjct: 354 VKKWAPQVDILSHKATCVFLSHCGWNSILESLSHGVPLLGWPMAAEQFFNSILMEKHIGV 413
Query: 399 GIRVGEGTRNIPESDELA---RLLAQSVDGPRRERLKARELSGAALSAVVKG--GSSDRD 453
+ V G R + D++ +L+ + + + R KARE+ A+V G GSS
Sbjct: 414 SVEVARGKRCEIKCDDIVSKIKLVMEETEVGKEIRKKAREVKELVRRAMVDGVKGSSVIG 473
Query: 454 LNDFI 458
L +F+
Sbjct: 474 LEEFL 478
|
|
| TAIR|locus:2040570 DOGT1 "don-glucosyltransferase 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 548 (198.0 bits), Expect = 6.3e-53, P = 6.3e-53
Identities = 153/494 (30%), Positives = 240/494 (48%)
Query: 7 HILVYPFPTSGHIIPXXXXXXXXXXXXXXXXXXXXQNNLPLLDSLNANHPSTSLQSLVLP 66
H +++PF GH+IP +N ++ N S + L
Sbjct: 12 HFVLFPFMAQGHMIPMVDIARLLAQRGVIITIVTTPHNAARFKNV-LNRAIESGLPINLV 70
Query: 67 QPKWP---AG---------SPAT--RLLKFMRVLRELHYPA--LLDWFKSHPSPPVAILS 110
Q K+P AG S T R++ F + + L P L++ PS ++S
Sbjct: 71 QVKFPYLEAGLQEGQENIDSLDTMERMIPFFKAVNFLEEPVQKLIEEMNPRPS---CLIS 127
Query: 111 DFFLGWTQGLAAELGLPRVVFSPSGAFALSVSFAMWTDLPTNDDPDNVDALVSFPRVPNC 170
DF L +T +A + +P+++F G F L + + D+ + L + P P+
Sbjct: 128 DFCLPYTSKIAKKFNIPKILFHGMGCFCLLCMHVLRKNREILDNLKSDKELFTVPDFPDR 187
Query: 171 PVYPWYQISHLYRTLKEGDPDW-DLHRSNMMANKTSWGIVFNSFAELERVYIDHMKKEMG 229
+ Q+ + + GD W D+ + AN+TS+G++ NSF ELE Y K E+
Sbjct: 188 VEFTRTQVP-VETYVPAGD--WKDIFDGMVEANETSYGVIVNSFQELEPAYAKDYK-EVR 243
Query: 230 HDRVWAVGPVLPPDDDLVESMCRGGSSSVPAHDVLTWLDSRRDESVVYVCFGSRYVLTAK 289
+ W +GPV + + RG S + + L WLDS++ SV+YVC GS L
Sbjct: 244 SGKAWTIGPVSLCNKVGADKAERGNKSDIDQDECLKWLDSKKHGSVLYVCLGSICNLPLS 303
Query: 290 QIHELAAALEKTDVDFVYCVREPDERHASQDCGVLPDGFEDRVAGRGYVIRGWSQQVAIL 349
Q+ EL LE++ F++ +R E++ GFEDR+ RG +I+GWS Q+ IL
Sbjct: 304 QLKELGLGLEESQRPFIWVIRGW-EKYKELVEWFSESGFEDRIQDRGLLIKGWSPQMLIL 362
Query: 350 RHKAVGAFLTHCGWNSVLEGVSAGVVMLTWPMDADQYTNAQLLVDQLGVGIRVG-EGTRN 408
H +VG FLTHCGWNS LEG++AG+ +LTWP+ ADQ+ N +L+V+ L G+R G E
Sbjct: 363 SHPSVGGFLTHCGWNSTLEGITAGLPLLTWPLFADQFCNEKLVVEVLKAGVRSGVEQPMK 422
Query: 409 IPESDELA-------------RLLAQSVDGPRRERLKARELSGAALSAVVKGGSSDRDLN 455
E +++ L+ +S D R R +A+EL +A AV +GGSS +++
Sbjct: 423 WGEEEKIGVLVDKEGVKKAVEELMGESDDAKERRR-RAKELGDSAHKAVEEGGSSHSNIS 481
Query: 456 DFIKRINELKSGKN 469
++ I EL N
Sbjct: 482 FLLQDIMELAEPNN 495
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
ID ![]() | Name ![]() | Annotated EC number ![]() | Identity ![]() | Query coverage ![]() | Hit coverage ![]() | RBH(Q2H) ![]() | RBH(H2Q) ![]() |
| Q9C9B0 | U89B1_ARATH | 2, ., 4, ., 1, ., 9, 1 | 0.5020 | 0.9556 | 0.9556 | yes | no |
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
| Your Input: | |||||||||||
| GSVIVG00017555001 | SubName- Full=Chromosome chr17 scaffold_16, whole genome shotgun sequence; (462 aa) | ||||||||||
(Vitis vinifera) | |||||||||||
Predicted Functional Partners: | |||||||||||
| Sorry, there are no predicted associations at the current settings. | |||||||||||
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 473 | |||
| PLN02863 | 477 | PLN02863, PLN02863, UDP-glucoronosyl/UDP-glucosyl | 0.0 | |
| PLN03007 | 482 | PLN03007, PLN03007, UDP-glucosyltransferase family | 5e-83 | |
| PLN02534 | 491 | PLN02534, PLN02534, UDP-glycosyltransferase | 4e-72 | |
| PLN00164 | 480 | PLN00164, PLN00164, glucosyltransferase; Provision | 1e-61 | |
| PLN02167 | 475 | PLN02167, PLN02167, UDP-glycosyltransferase family | 6e-59 | |
| PLN02448 | 459 | PLN02448, PLN02448, UDP-glycosyltransferase family | 2e-56 | |
| PLN02992 | 481 | PLN02992, PLN02992, coniferyl-alcohol glucosyltran | 2e-54 | |
| PLN03015 | 470 | PLN03015, PLN03015, UDP-glucosyl transferase | 3e-54 | |
| PLN02555 | 480 | PLN02555, PLN02555, limonoid glucosyltransferase | 5e-54 | |
| PLN03004 | 451 | PLN03004, PLN03004, UDP-glycosyltransferase | 4e-51 | |
| PLN02554 | 481 | PLN02554, PLN02554, UDP-glycosyltransferase family | 3e-44 | |
| PLN02207 | 468 | PLN02207, PLN02207, UDP-glycosyltransferase | 3e-42 | |
| PLN02670 | 472 | PLN02670, PLN02670, transferase, transferring glyc | 2e-41 | |
| PLN02173 | 449 | PLN02173, PLN02173, UDP-glucosyl transferase famil | 9e-41 | |
| PLN02410 | 451 | PLN02410, PLN02410, UDP-glucoronosyl/UDP-glucosyl | 3e-39 | |
| PLN02210 | 456 | PLN02210, PLN02210, UDP-glucosyl transferase | 5e-39 | |
| PLN02152 | 455 | PLN02152, PLN02152, indole-3-acetate beta-glucosyl | 5e-37 | |
| PLN00414 | 446 | PLN00414, PLN00414, glycosyltransferase family pro | 1e-30 | |
| PLN02764 | 453 | PLN02764, PLN02764, glycosyltransferase family pro | 4e-30 | |
| PLN02562 | 448 | PLN02562, PLN02562, UDP-glycosyltransferase | 1e-23 | |
| PLN02208 | 442 | PLN02208, PLN02208, glycosyltransferase family pro | 9e-22 | |
| cd03784 | 401 | cd03784, GT1_Gtf_like, This family includes the Gt | 4e-19 | |
| pfam00201 | 500 | pfam00201, UDPGT, UDP-glucoronosyl and UDP-glucosy | 2e-13 | |
| PHA03392 | 507 | PHA03392, egt, ecdysteroid UDP-glucosyltransferase | 2e-09 | |
| TIGR01426 | 392 | TIGR01426, MGT, glycosyltransferase, MGT family | 3e-09 | |
| COG1819 | 406 | COG1819, COG1819, Glycosyl transferases, related t | 4e-08 |
| >gnl|CDD|215465 PLN02863, PLN02863, UDP-glucoronosyl/UDP-glucosyl transferase family protein | Back alignment and domain information |
|---|
Score = 597 bits (1541), Expect = 0.0
Identities = 263/472 (55%), Positives = 338/472 (71%), Gaps = 14/472 (2%)
Query: 3 PAGAHILVYPFPTSGHIIPLLDLTNRLLTLGLNVTVLITQNNLPLLDSLNANHPSTSLQS 62
PAG H+LV+PFP GH+IPLLDLT+RL GL +TVL+T NLP L+ L + HPS +++
Sbjct: 7 PAGTHVLVFPFPAQGHMIPLLDLTHRLALRGLTITVLVTPKNLPFLNPLLSKHPS--IET 64
Query: 63 LVLP---QPKWPAGS------PATRLLKFMRVLRELHYPALLDWFKSHPSPPVAILSDFF 113
LVLP P P+G P + + L EL+ P LL WF+SHPSPPVAI+SD F
Sbjct: 65 LVLPFPSHPSIPSGVENVKDLPPSGFPLMIHALGELYAP-LLSWFRSHPSPPVAIISDMF 123
Query: 114 LGWTQGLAAELGLPRVVFSPSGAFALSVSFAMWTDLPTNDDPDNVDALVSFPRVPNCPVY 173
LGWTQ LA +LG+ R VFSPSGA ALS+ +++W ++PT +PD+ + ++SF ++PNCP Y
Sbjct: 124 LGWTQNLACQLGIRRFVFSPSGAMALSIMYSLWREMPTKINPDDQNEILSFSKIPNCPKY 183
Query: 174 PWYQISHLYRTLKEGDPDWDLHRSNMMANKTSWGIVFNSFAELERVYIDHMKKEMGHDRV 233
PW+QIS LYR+ EGDP W+ + + AN SWG+V NSF ELE +Y++H+KKE+GHDRV
Sbjct: 184 PWWQISSLYRSYVEGDPAWEFIKDSFRANIASWGLVVNSFTELEGIYLEHLKKELGHDRV 243
Query: 234 WAVGPVLPPDDDLVESMCRGGSSSVPAHDVLTWLDSRRDESVVYVCFGSRYVLTAKQIHE 293
WAVGP+LP + M RGG SSV DV+TWLD+ D VVYVCFGS+ VLT +Q+
Sbjct: 244 WAVGPILPLSGEKSGLMERGGPSSVSVDDVMTWLDTCEDHKVVYVCFGSQVVLTKEQMEA 303
Query: 294 LAAALEKTDVDFVYCVREPDERHASQDCGVLPDGFEDRVAGRGYVIRGWSQQVAILRHKA 353
LA+ LEK+ V F++CV+EP D +P GFEDRVAGRG VIRGW+ QVAIL H+A
Sbjct: 304 LASGLEKSGVHFIWCVKEPVNE--ESDYSNIPSGFEDRVAGRGLVIRGWAPQVAILSHRA 361
Query: 354 VGAFLTHCGWNSVLEGVSAGVVMLTWPMDADQYTNAQLLVDQLGVGIRVGEGTRNIPESD 413
VGAFLTHCGWNSVLEG+ AGV ML WPM ADQ+ NA LLVD+L V +RV EG +P+SD
Sbjct: 362 VGAFLTHCGWNSVLEGLVAGVPMLAWPMAADQFVNASLLVDELKVAVRVCEGADTVPDSD 421
Query: 414 ELARLLAQSVDGPRRERLKARELSGAALSAVVKGGSSDRDLNDFIKRINELK 465
ELAR+ +SV + ER +A+EL AAL A+ + GSS +DL+ F+K + EL
Sbjct: 422 ELARVFMESVSENQVERERAKELRRAALDAIKERGSSVKDLDGFVKHVVELG 473
|
Length = 477 |
| >gnl|CDD|178584 PLN03007, PLN03007, UDP-glucosyltransferase family protein | Back alignment and domain information |
|---|
Score = 264 bits (675), Expect = 5e-83
Identities = 152/498 (30%), Positives = 248/498 (49%), Gaps = 61/498 (12%)
Query: 7 HILVYPFPTSGHIIPLLDLTNRLLTLGLNVTVLITQNNLPLL----DSLNANHPSTSLQ- 61
HIL +PF GH+IP LD+ + G T+L T N + ++ +P +
Sbjct: 7 HILFFPFMAHGHMIPTLDMAKLFSSRGAKSTILTTPLNAKIFEKPIEAFKNLNPGLEIDI 66
Query: 62 --------SLVLPQ-----------PKWPAGSPATRLLKFMRVLRELHYPALLDWFKSHP 102
L LP+ +G + L + ++ LL+ +
Sbjct: 67 QIFNFPCVELGLPEGCENVDFITSNNNDDSGDLFLKFLFSTKYFKD-QLEKLLETTR--- 122
Query: 103 SPPVAILSDFFLGWTQGLAAELGLPRVVFSPSGAFALSVSFAMWTDLPTNDDPDNVDALV 162
P +++D F W A + G+PR+VF +G F+L S+ + P + + V
Sbjct: 123 --PDCLVADMFFPWATEAAEKFGVPRLVFHGTGYFSLCASYCIRVHKPQKKVASSSEPFV 180
Query: 163 SFPRVPNCPVYPWYQISHLYRTLKEGDPDWDLHRSNMM-----ANKTSWGIVFNSFAELE 217
P +P V QI+ + D + + + M + S+G++ NSF ELE
Sbjct: 181 -IPDLPGDIVITEEQIN-------DADEESPMGK--FMKEVRESEVKSFGVLVNSFYELE 230
Query: 218 RVYIDHMKKEMGHDRVWAVGPVLPPDDDLVESMCRGGSSSVPAHDVLTWLDSRRDESVVY 277
Y D K + R W +GP+ + E RG +++ + L WLDS++ +SV+Y
Sbjct: 231 SAYADFYKSFVA-KRAWHIGPLSLYNRGFEEKAERGKKANIDEQECLKWLDSKKPDSVIY 289
Query: 278 VCFGSRYVLTAKQIHELAAALEKTDVDFVYCVREPDERHASQDCGVLPDGFEDRVAGRGY 337
+ FGS +Q+ E+AA LE + +F++ VR+ + + ++ LP+GFE+R G+G
Sbjct: 290 LSFGSVASFKNEQLFEIAAGLEGSGQNFIWVVRKNENQGEKEEW--LPEGFEERTKGKGL 347
Query: 338 VIRGWSQQVAILRHKAVGAFLTHCGWNSVLEGVSAGVVMLTWPMDADQYTNAQLLVDQLG 397
+IRGW+ QV IL H+A G F+THCGWNS+LEGV+AG+ M+TWP+ A+Q+ N +L+ L
Sbjct: 348 IIRGWAPQVLILDHQATGGFVTHCGWNSLLEGVAAGLPMVTWPVGAEQFYNEKLVTQVLR 407
Query: 398 VGIRVGEGTRNIPESDELARLLAQSVDGPRRE----------RLKARELSGAALSAVVKG 447
G+ VG + D ++R + V+ RE RL+A++L+ A +AV +G
Sbjct: 408 TGVSVGAKKLVKVKGDFISR---EKVEKAVREVIVGEEAEERRLRAKKLAEMAKAAVEEG 464
Query: 448 GSSDRDLNDFIKRINELK 465
GSS DLN F++ +N K
Sbjct: 465 GSSFNDLNKFMEELNSRK 482
|
Length = 482 |
| >gnl|CDD|215293 PLN02534, PLN02534, UDP-glycosyltransferase | Back alignment and domain information |
|---|
Score = 235 bits (602), Expect = 4e-72
Identities = 152/489 (31%), Positives = 241/489 (49%), Gaps = 38/489 (7%)
Query: 7 HILVYPFPTSGHIIPLLDLTNRLLTLGLNVTVLITQNNLPLLDSLNANHPSTSLQSLVLP 66
H ++ P GH+IP++D+ L G+ V+++ T N + L ++
Sbjct: 10 HFVLIPLMAQGHMIPMIDMARLLAERGVIVSLVTTPQNASRFAKTIDRARESGLPIRLVQ 69
Query: 67 QP------KWPAGS------PATRLL-KFMRVLRELHYPALLDWFKSHPSPPVA-ILSDF 112
P P G P+ LL KF + +L P L+ F PP + I+SD
Sbjct: 70 IPFPCKEVGLPIGCENLDTLPSRDLLRKFYDAVDKLQQP--LERFLEQAKPPPSCIISDK 127
Query: 113 FLGWTQGLAAELGLPRVVFSPSGAFALSVSFAMWTDLPTNDDPDNVDALVSFPRVPNCPV 172
L WT A +PR+VF F+L S + + + V P +P
Sbjct: 128 CLSWTSKTAQRFNIPRIVFHGMCCFSLLSSHNIRLHNAHLSVSSDSEPFV-VPGMPQSIE 186
Query: 173 YPWYQISHLYRTLKEGDPDWDLHRSNMM-ANKTSWGIVFNSFAELERVYIDHMKKEMGHD 231
Q+ + +L PD D R+ M A T++G+V NSF ELE + +K +
Sbjct: 187 ITRAQLPGAFVSL----PDLDDVRNKMREAESTAFGVVVNSFNELEHGCAEAYEKAI-KK 241
Query: 232 RVWAVGPVLPPDDDLVESMCRGGSSSVPAHDVLTWLDSRRDESVVYVCFGSRYVLTAKQI 291
+VW VGPV + ++ RG +S+ L WLDS + SV+Y C GS L Q+
Sbjct: 242 KVWCVGPVSLCNKRNLDKFERGNKASIDETQCLEWLDSMKPRSVIYACLGSLCRLVPSQL 301
Query: 292 HELAAALEKTDVDFVYCVREPDERHASQDCGVLPDGFEDRVAGRGYVIRGWSQQVAILRH 351
EL LE + F++ ++ E+H+ + ++ + FE+R+ GRG +I+GW+ QV IL H
Sbjct: 302 IELGLGLEASKKPFIWVIKT-GEKHSELEEWLVKENFEERIKGRGLLIKGWAPQVLILSH 360
Query: 352 KAVGAFLTHCGWNSVLEGVSAGVVMLTWPMDADQYTNAQLLVDQLGVGIRVG-------- 403
A+G FLTHCGWNS +EG+ +GV M+TWP+ A+Q+ N +L+V+ L +G+RVG
Sbjct: 361 PAIGGFLTHCGWNSTIEGICSGVPMITWPLFAEQFLNEKLIVEVLRIGVRVGVEVPVRWG 420
Query: 404 --EGTRNIPESDELAR----LLAQSVDGPRRERLKARELSGAALSAVVKGGSSDRDLNDF 457
E + + DE+ + L+ + R R +A+EL A A+ GGSS +L+
Sbjct: 421 DEERVGVLVKKDEVEKAVKTLMDDGGEEGERRRRRAQELGVMARKAMELGGSSHINLSIL 480
Query: 458 IKRINELKS 466
I+ + + +S
Sbjct: 481 IQDVLKQQS 489
|
Length = 491 |
| >gnl|CDD|215084 PLN00164, PLN00164, glucosyltransferase; Provisional | Back alignment and domain information |
|---|
Score = 207 bits (530), Expect = 1e-61
Identities = 144/480 (30%), Positives = 218/480 (45%), Gaps = 52/480 (10%)
Query: 4 AGAHILVYPFPTSGHIIPLLDLTNRLLTLG----LNVTVLITQNNLPLLDSLNANHPSTS 59
A +++ P SGH++ +L+ RLL L++TVL+ P S A H
Sbjct: 2 AAPTVVLLPVWGSGHLMSMLEAGKRLLASSGGGALSLTVLVMPPPTPESASEVAAHVRRE 61
Query: 60 LQSLV------LPQPKWPAGSPATRLLKFMRVLRELHYPALLDWFKSHPSPPVAILSDFF 113
S + LP + P A + +F+ +LH P + P A++ DFF
Sbjct: 62 AASGLDIRFHHLPAVEPPTD--AAGVEEFISRYIQLHAPHVRAAIAGLSCPVAALVVDFF 119
Query: 114 LGWTQGLAAELGLPRVVFSPSGAFALSVSFAMWTDLPTNDDP-----DNVDALVSFPRVP 168
+A EL +P V+ S A L A+ LP D+ + ++ V P +P
Sbjct: 120 CTPLLDVARELAVPAYVYFTSTAAML----ALMLRLPALDEEVAVEFEEMEGAVDVPGLP 175
Query: 169 NCPVYPWYQISHLYRTLKEGDPDWDLHRSNMMANKTSWGIVFNSFAELERVYIDHMKKE- 227
PV + + K + W ++ GI+ N+ AELE + +
Sbjct: 176 --PVPASSLPAPVMDK-KSPNYAWFVYHGRRFMEAA--GIIVNTAAELEPGVLAAIADGR 230
Query: 228 -MGHDR---VWAVGPVLPPDDDLVESMCRGGSSSVPAHDVLTWLDSRRDESVVYVCFGSR 283
V+ +GPV+ + P H+ + WLD++ SVV++CFGS
Sbjct: 231 CTPGRPAPTVYPIGPVISLAFTP--------PAEQPPHECVRWLDAQPPASVVFLCFGSM 282
Query: 284 YVLTAKQIHELAAALEKTDVDFVYCVR---EPDERHASQDCGV---LPDGFEDRVAGRGY 337
A Q+ E+AA LE++ F++ +R RH + D + LP+GF +R GRG
Sbjct: 283 GFFDAPQVREIAAGLERSGHRFLWVLRGPPAAGSRHPT-DADLDELLPEGFLERTKGRGL 341
Query: 338 VIRGWSQQVAILRHKAVGAFLTHCGWNSVLEGVSAGVVMLTWPMDADQYTNAQLLVDQLG 397
V W+ Q IL H AVG F+THCGWNSVLE + GV M WP+ A+Q+ NA LV +G
Sbjct: 342 VWPTWAPQKEILAHAAVGGFVTHCGWNSVLESLWHGVPMAPWPLYAEQHLNAFELVADMG 401
Query: 398 VGIRVGEGTR--NIPESDELAR----LLAQSVDGPRRERLKARELSGAALSAVVKGGSSD 451
V + + + N E+ EL R L+ + R+ R KA E+ A AV +GGSS
Sbjct: 402 VAVAMKVDRKRDNFVEAAELERAVRSLMGGGEEEGRKAREKAAEMKAACRKAVEEGGSSY 461
|
Length = 480 |
| >gnl|CDD|215112 PLN02167, PLN02167, UDP-glycosyltransferase family protein | Back alignment and domain information |
|---|
Score = 200 bits (511), Expect = 6e-59
Identities = 151/492 (30%), Positives = 227/492 (46%), Gaps = 61/492 (12%)
Query: 6 AHILVYPFPTSGHIIPLLDLTNRLLTLGLNV-TVLITQNNLPL-------LDSLNANHPS 57
A ++ PFP++GHI+ ++ RL+ L + T+ I +LP L SL A+ P
Sbjct: 4 AELIFVPFPSTGHILVTIEFAKRLINLDRRIHTITILYWSLPFAPQADAFLKSLIASEPR 63
Query: 58 TSLQSLVLPQPKWP----AGSPATRLLKFMRVLRELHYPALLDWFKSHPSPP----VAIL 109
L +L Q P + +L+F++ + L AL S ++
Sbjct: 64 IRLVTLPEVQDPPPMELFVKASEAYILEFVKKMVPLVRDALSTLVSSRDESDSVRVAGLV 123
Query: 110 SDFFLGWTQGLAAELGLPRVVFSPSGAFALSV---------SFAMWTDLPTNDDPDNVDA 160
DFF + E LP +F A L + A DL + ++ +
Sbjct: 124 LDFFCVPLIDVGNEFNLPSYIFLTCNAGFLGMMKYLPERHRKTASEFDLSSGEEELPIPG 183
Query: 161 LVSFPRVPNCPVYPWYQISHLYRTLKEGDPDWDLHRSNMMANK--TSWGIVFNSFAELER 218
V+ VP + P + Y E +A + + GI+ NSF ELE
Sbjct: 184 FVN--SVPTKVLPPGLFMKESYEAWVE------------IAERFPEAKGILVNSFTELEP 229
Query: 219 V---YIDHMKKEMGHDRVWAVGPVLPPDDDLVESMCRGGSSSVPAHDVLTWLDSRRDESV 275
Y + + V+ VGP+L D ++ S ++ WLD + + SV
Sbjct: 230 NAFDYFSRLPENYPP--VYPVGPILSLKDRTSPNL-----DSSDRDRIMRWLDDQPESSV 282
Query: 276 VYVCFGSRYVLTAKQIHELAAALEKTDVDFVYCVR-EPDERHASQDCGVLPDGFEDRVAG 334
V++CFGS L A QI E+A ALE F++ +R P E + + LP+GF DRV G
Sbjct: 283 VFLCFGSLGSLPAPQIKEIAQALELVGCRFLWSIRTNPAEYASPYE--PLPEGFMDRVMG 340
Query: 335 RGYVIRGWSQQVAILRHKAVGAFLTHCGWNSVLEGVSAGVVMLTWPMDADQYTNAQLLVD 394
RG V GW+ QV IL HKA+G F++HCGWNSVLE + GV + TWPM A+Q NA +V
Sbjct: 341 RGLVC-GWAPQVEILAHKAIGGFVSHCGWNSVLESLWFGVPIATWPMYAEQQLNAFTMVK 399
Query: 395 QLGVGIR-----VGEGTRNIPESDELARLLAQSVDGPRRERLKARELSGAALSAVVKGGS 449
+LG+ + V I ++DE+A + +DG R K +E++ AA AV+ GGS
Sbjct: 400 ELGLAVELRLDYVSAYG-EIVKADEIAGAVRSLMDGEDVPRKKVKEIAEAARKAVMDGGS 458
Query: 450 SDRDLNDFIKRI 461
S + FI +
Sbjct: 459 SFVAVKRFIDDL 470
|
Length = 475 |
| >gnl|CDD|215247 PLN02448, PLN02448, UDP-glycosyltransferase family protein | Back alignment and domain information |
|---|
Score = 193 bits (493), Expect = 2e-56
Identities = 132/484 (27%), Positives = 219/484 (45%), Gaps = 53/484 (10%)
Query: 3 PAGAHILVYPFPTSGHIIPLLDLTNRLLTL--GLNVTVLITQNNLPLLDSLNANHPSTSL 60
H++ P+P GHI P+++L L + + +T ++T+ L L+ S + +
Sbjct: 8 TTSCHVVAMPYPGRGHINPMMNLCKLLASRKPDILITFVVTEEWLGLIGS-DPKPDNIRF 66
Query: 61 QSL--VLPQPKWPAGSPATRLLKFMR-VLRELHYP--ALLDWFKSHPSPPVAILSDFFLG 115
++ V+P A F+ V+ ++ P LLD + P AI++D +L
Sbjct: 67 ATIPNVIPSELVRAADFPG----FLEAVMTKMEAPFEQLLDRLEP---PVTAIVADTYLF 119
Query: 116 WTQGLAAELGLPRVVFSPSGA--FALSVSFAMWTDLPTNDDPDNVDALVSFPRVPNCPVY 173
W G+ +P A F++ F + P N + RV P
Sbjct: 120 WAVGVGNRRNIPVASLWTMSATFFSVFYHFDLL---PQNGHFPVELSESGEERVDYIPGL 176
Query: 174 PWYQISHLYRTLKEGDPDWDLHRS-NMMANKTSW-----GIVFNSFAELERVYIDHMKKE 227
++S L + R + SW ++F SF ELE ID +K +
Sbjct: 177 SSTRLSDLPPIF-----HGNSRRVLKRILEAFSWVPKAQYLLFTSFYELEAQAIDALKSK 231
Query: 228 MGHDRVWAVGPVLPPDDDLVESMCRGGSSSVPAHDVLTWLDSRRDESVVYVCFGSRYVLT 287
V+ +GP +P + S + P D WLDS+ + SV+YV GS ++
Sbjct: 232 F-PFPVYPIGPSIPYMELKDNSSSSNNEDNEP--DYFQWLDSQPEGSVLYVSLGSFLSVS 288
Query: 288 AKQIHELAAALEKTDVDFVYCVREPDERHASQDCGVLPDGFEDRVAGRGYVIRGWSQQVA 347
+ Q+ E+AA L + V F++ R R ++ G V+ W Q+
Sbjct: 289 SAQMDEIAAGLRDSGVRFLWVARGEASR------------LKEICGDMGLVV-PWCDQLK 335
Query: 348 ILRHKAVGAFLTHCGWNSVLEGVSAGVVMLTWPMDADQYTNAQLLVD--QLGVGIRVGEG 405
+L H +VG F THCGWNS LE V AGV MLT+P+ DQ N++L+V+ ++G ++ G
Sbjct: 336 VLCHSSVGGFWTHCGWNSTLEAVFAGVPMLTFPLFWDQPLNSKLIVEDWKIGWRVKREVG 395
Query: 406 TRNIPESDELARLLAQSVDGPRRE----RLKARELSGAALSAVVKGGSSDRDLNDFIKRI 461
+ +E+A L+ + +D E R +A+EL A+ KGGSSD +L+ FI+ I
Sbjct: 396 EETLVGREEIAELVKRFMDLESEEGKEMRRRAKELQEICRGAIAKGGSSDTNLDAFIRDI 455
Query: 462 NELK 465
++ +
Sbjct: 456 SQGR 459
|
Length = 459 |
| >gnl|CDD|178572 PLN02992, PLN02992, coniferyl-alcohol glucosyltransferase | Back alignment and domain information |
|---|
Score = 189 bits (480), Expect = 2e-54
Identities = 152/496 (30%), Positives = 225/496 (45%), Gaps = 57/496 (11%)
Query: 7 HILVYPFPTSGHIIPLLDLTNRL-LTLGLNVTVLITQNNLPLLDSLNANHPSTSLQSLVL 65
H ++ P GH+IP+++L RL G +VTV + + + S N ST + + L
Sbjct: 7 HAAMFSSPGMGHVIPVIELGKRLSANHGFHVTVFVLETDAASAQSKFLN--STGVDIVGL 64
Query: 66 PQPKW-----PAGSPATRLLKFMRVLRELHYPALLDWFKSHPSPPVAILSDFFLGWTQGL 120
P P P+ T++ MR P L P A++ D F L
Sbjct: 65 PSPDISGLVDPSAHVVTKIGVIMREA----VPTLRSKIAEMHQKPTALIVDLFGTDALCL 120
Query: 121 AAELGLPRVVFSPSGAFALSVSFAMWTDLPTNDDPDNVDALVSFP--RVPNCPVYPWYQI 178
E + +F S A L VS PT D + V +P C +
Sbjct: 121 GGEFNMLTYIFIASNARFLGVSIY----YPTLDKDIKEEHTVQRKPLAMPGCEPVRFEDT 176
Query: 179 SHLYRTLKEGDPDWDLHRS---NMMANKTSWGIVFNSFAELERVYIDHMKKEMGHDRVWA 235
Y PD ++R + +A + GI+ N++ E+E + ++ RV
Sbjct: 177 LDAYL-----VPDEPVYRDFVRHGLAYPKADGILVNTWEEMEPKSLKSLQDPKLLGRVAR 231
Query: 236 VGPVLPPDDDLVESMCRGGSSSVPAHDVLTWLDSRRDESVVYVCFGSRYVLTAKQIHELA 295
V PV P + +CR SS H VL WL+ + +ESV+Y+ FGS L+AKQ+ ELA
Sbjct: 232 V-PVYP-----IGPLCRPIQSSKTDHPVLDWLNKQPNESVLYISFGSGGSLSAKQLTELA 285
Query: 296 AALEKTDVDFVYCVREPDE-----RHASQDCGV--------LPDGFEDRVAGRGYVIRGW 342
LE + FV+ VR P + + S + G LP+GF R RG+V+ W
Sbjct: 286 WGLEMSQQRFVWVVRPPVDGSACSAYFSANGGETRDNTPEYLPEGFVSRTHDRGFVVPSW 345
Query: 343 SQQVAILRHKAVGAFLTHCGWNSVLEGVSAGVVMLTWPMDADQYTNAQLLVDQLGVGIRV 402
+ Q IL H+AVG FLTHCGW+S LE V GV M+ WP+ A+Q NA LL D+LG+ +R
Sbjct: 346 APQAEILAHQAVGGFLTHCGWSSTLESVVGGVPMIAWPLFAEQNMNAALLSDELGIAVRS 405
Query: 403 GEGTRNIPES--DELARLLAQSVDGP--RRERLKARELSGAALSAVVKGGSSDRDL---- 454
+ I S + L R + +G RR+ K R+ + +LS + GG + L
Sbjct: 406 DDPKEVISRSKIEALVRKVMVEEEGEEMRRKVKKLRDTAEMSLS-IDGGGVAHESLCRVT 464
Query: 455 ---NDFIKRINELKSG 467
F++R+ L G
Sbjct: 465 KECQRFLERVRCLARG 480
|
Length = 481 |
| >gnl|CDD|178589 PLN03015, PLN03015, UDP-glucosyl transferase | Back alignment and domain information |
|---|
Score = 188 bits (478), Expect = 3e-54
Identities = 148/481 (30%), Positives = 242/481 (50%), Gaps = 47/481 (9%)
Query: 7 HILVYPFPTSGHIIPLLDLTNRLLT-LGLNVTVLITQNNLPLLDSLNANHPS-------- 57
H L+ P GH+IP+L+L NRL + L ++VT+L + A H +
Sbjct: 5 HALLVASPGLGHLIPILELGNRLSSVLNIHVTILAVTSGSSSPTETEAIHAAAARTTCQI 64
Query: 58 TSLQSLVLPQPKWPAGSPATRLLKFMRVLRELHYPALLDWFKSHPSPPVAILSDFFLGWT 117
T + S+ + P + T+++ MR ++ PA+ D KS P ++ DFF
Sbjct: 65 TEIPSVDVDNLVEPDATIFTKMVVKMRAMK----PAVRDAVKSMKRKPTVMIVDFFGTAL 120
Query: 118 QGLAAELGL-PRVVFSPSGAFALSVSFAMWTDLPTND---DPDNVDALVSFP-RVPNC-P 171
+A ++G+ + V+ PS A+ L A+ LP D + + VD + P ++P C P
Sbjct: 121 MSIADDVGVTAKYVYIPSHAWFL----AVMVYLPVLDTVVEGEYVD--IKEPLKIPGCKP 174
Query: 172 VYPWYQISHLYRT-LKEGDPDWDLHRSNMMANKTSWGIVFNSFAELERVYIDHMKKEMGH 230
V P L T L D + + + S G++ N++ EL+ + ++++M
Sbjct: 175 VGP----KELMETMLDRSDQQYKECVRSGLEVPMSDGVLVNTWEELQGNTLAALREDMEL 230
Query: 231 DRVWAVGPVLPPDDDLVESMCRGGSSSVPAHDVLTWLDSRRDESVVYVCFGSRYVLTAKQ 290
+RV V PV P + + R + + WLD + + SVVYVC GS LT +Q
Sbjct: 231 NRVMKV-PVYP-----IGPIVRTNVHVEKRNSIFEWLDKQGERSVVYVCLGSGGTLTFEQ 284
Query: 291 IHELAAALEKTDVDFVYCVREP------DERHASQDCGVLPDGFEDRVAGRGYVIRGWSQ 344
ELA LE + FV+ +R P Q LP+GF DR G G V+ W+
Sbjct: 285 TVELAWGLELSGQRFVWVLRRPASYLGASSSDDDQVSASLPEGFLDRTRGVGLVVTQWAP 344
Query: 345 QVAILRHKAVGAFLTHCGWNSVLEGVSAGVVMLTWPMDADQYTNAQLLVDQLGVGIRVGE 404
QV IL H+++G FL+HCGW+SVLE ++ GV ++ WP+ A+Q+ NA LL +++GV +R E
Sbjct: 345 QVEILSHRSIGGFLSHCGWSSVLESLTKGVPIVAWPLYAEQWMNATLLTEEIGVAVRTSE 404
Query: 405 -GTRNIPESDELA----RLLAQSVDGPRRERLKARELSGAALSAVVKGGSSDRDLNDFIK 459
+ + +E+A +++A+ + ++ R KA E+ ++ A GGSS L ++ K
Sbjct: 405 LPSEKVIGREEVASLVRKIVAEEDEEGQKIRAKAEEVRVSSERAWSHGGSSYNSLFEWAK 464
Query: 460 R 460
R
Sbjct: 465 R 465
|
Length = 470 |
| >gnl|CDD|178170 PLN02555, PLN02555, limonoid glucosyltransferase | Back alignment and domain information |
|---|
Score = 187 bits (477), Expect = 5e-54
Identities = 136/486 (27%), Positives = 227/486 (46%), Gaps = 42/486 (8%)
Query: 7 HILVYPFPTSGHIIPLLDLTNRLLTLGLNVTVLITQNNLPLLDSLN--ANHPSTSLQSLV 64
H+++ FP GH+ PLL L L + GL VT + T++ + N + +
Sbjct: 9 HVMLVSFPGQGHVNPLLRLGKLLASKGLLVTFVTTESWGKKMRQANKIQDGVLKPVGDGF 68
Query: 65 LP----QPKWPAGSPATRLLKFMRVLREL----HYPALLDWFKSHPSPPVAILSDFFLGW 116
+ + W P + L EL P L+ + P ++++ F+ W
Sbjct: 69 IRFEFFEDGWAEDDPRRQDLDLYLPQLELVGKREIPNLVKRYAEQGRPVSCLINNPFIPW 128
Query: 117 TQGLAAELGLPRVVFSPSGAFALSVSFAMWTDL---PTNDDPD-NVDALVSFPRVPNCPV 172
+A ELG+P V S + + L PT +P+ +V +P P+
Sbjct: 129 VCDVAEELGIPSAVLWVQSCACFSAYYHYYHGLVPFPTETEPEIDVQ-------LPCMPL 181
Query: 173 YPWYQI-SHLYRTLKEGDPDWDLHRSNMMANKT---SWGIVFNSFAELERVYIDHMKKEM 228
+ +I S L+ + P L R+ + K + I+ ++F ELE+ ID+M K
Sbjct: 182 LKYDEIPSFLHPS----SPYPFLRRAILGQYKNLDKPFCILIDTFQELEKEIIDYMSKLC 237
Query: 229 GHDRVWAVGPVLPPDDDLVESMCRGGSSSVPAHDVLTWLDSRRDESVVYVCFGSRYVLTA 288
+ VGP L S +G S PA D + WLDS+ SVVY+ FG+ L
Sbjct: 238 ---PIKPVGP-LFKMAKTPNSDVKGDISK-PADDCIEWLDSKPPSSVVYISFGTVVYLKQ 292
Query: 289 KQIHELAAALEKTDVDFVYCVREPDERHASQDCGVLPDGFEDRVAGRGYVIRGWSQQVAI 348
+QI E+A + + V F++ +R P + + + VLP+ F ++ +G +++ W Q +
Sbjct: 293 EQIDEIAYGVLNSGVSFLWVMRPPHK-DSGVEPHVLPEEFLEKAGDKGKIVQ-WCPQEKV 350
Query: 349 LRHKAVGAFLTHCGWNSVLEGVSAGVVMLTWPMDADQYTNAQLLVDQLGVGIRVGEG--- 405
L H +V F+THCGWNS +E +S+GV ++ +P DQ T+A LVD G+R+ G
Sbjct: 351 LAHPSVACFVTHCGWNSTMEALSSGVPVVCFPQWGDQVTDAVYLVDVFKTGVRLCRGEAE 410
Query: 406 TRNIPESDELARLLAQSVDGPRRERLK--ARELSGAALSAVVKGGSSDRDLNDFIKRINE 463
+ I +E+A L ++ G + LK A + A +AV +GGSSDR+ +F+ ++
Sbjct: 411 NKLITR-EEVAECLLEATVGEKAAELKQNALKWKEEAEAAVAEGGSSDRNFQEFVDKLVR 469
Query: 464 LKSGKN 469
Sbjct: 470 KSVEIV 475
|
Length = 480 |
| >gnl|CDD|178581 PLN03004, PLN03004, UDP-glycosyltransferase | Back alignment and domain information |
|---|
Score = 179 bits (455), Expect = 4e-51
Identities = 138/469 (29%), Positives = 234/469 (49%), Gaps = 52/469 (11%)
Query: 8 ILVYPFPTSGHIIPLLDLTNRLLTLGLNVTVLIT--------QNNLPLLDSLNANHPSTS 59
I++YP P GH++ +++L +L+ ++++ I ++ + S++++ PS +
Sbjct: 6 IVLYPAPPIGHLVSMVELGKTILSKNPSLSIHIILVPPPYQPESTATYISSVSSSFPSIT 65
Query: 60 LQSLVLPQPKWPAGSPATRLLKFMRVLRELHYPALLDWFKSHPSPPV------------- 106
L PA +P + H+ +LL +P V
Sbjct: 66 FHHL-------PAVTPYSS-----SSTSRHHHESLLLEILCFSNPSVHRTLFSLSRNFNV 113
Query: 107 -AILSDFFLGWTQGLAAELGLPRVVFSPSGAFALSVSFAMWTDLPTNDDPDNVDALVSFP 165
A++ DFF + A+ P F SGA L+ SF LPT D+ L P
Sbjct: 114 RAMIIDFFCTAVLDITADFTFPVYFFYTSGAACLAFSFY----LPTIDETTPGKNLKDIP 169
Query: 166 RVPNCPVYPWYQISHLYRTLKEGDPD-WDLHRSNMMANKTSWGIVFNSFAELERVYIDHM 224
V + P P + S + + + E D + +D+ S GI+ N+F LE I +
Sbjct: 170 TV-HIPGVPPMKGSDMPKAVLERDDEVYDVFIMFGKQLSKSSGIIINTFDALENRAIKAI 228
Query: 225 KKEMGHDRVWAVGPVLPPDDDLVESMCRGGSSSVPAHDVLTWLDSRRDESVVYVCFGSRY 284
+E+ ++ +GP++ + +E R + +V L WLDS+ ++SVV++CFGS
Sbjct: 229 TEELCFRNIYPIGPLIV--NGRIED--RNDNKAV---SCLNWLDSQPEKSVVFLCFGSLG 281
Query: 285 VLTAKQIHELAAALEKTDVDFVYCVREPDERHASQ-DC-GVLPDGFEDRVAGRGYVIRGW 342
+ + +Q+ E+A LEK+ F++ VR P E ++ D +LP+GF R +G V++ W
Sbjct: 282 LFSKEQVIEIAVGLEKSGQRFLWVVRNPPELEKTELDLKSLLPEGFLSRTEDKGMVVKSW 341
Query: 343 SQQVAILRHKAVGAFLTHCGWNSVLEGVSAGVVMLTWPMDADQYTNAQLLVDQLGVGIRV 402
+ QV +L HKAVG F+THCGWNS+LE V AGV M+ WP+ A+Q N ++VD++ + I +
Sbjct: 342 APQVPVLNHKAVGGFVTHCGWNSILEAVCAGVPMVAWPLYAEQRFNRVMIVDEIKIAISM 401
Query: 403 GEGTRNIPESDELARLLAQSV-DGPRRERLKARELSGAALSAVVKGGSS 450
E S E+ + + + + + P RER A + AA A+ + GSS
Sbjct: 402 NESETGFVSSTEVEKRVQEIIGECPVRERTMA--MKNAAELALTETGSS 448
|
Length = 451 |
| >gnl|CDD|215304 PLN02554, PLN02554, UDP-glycosyltransferase family protein | Back alignment and domain information |
|---|
Score = 161 bits (409), Expect = 3e-44
Identities = 144/506 (28%), Positives = 222/506 (43%), Gaps = 83/506 (16%)
Query: 9 LVY-PFPTSGHIIPLLDLTNRLL----TLGLNVTVLITQNNLPLLDSLNANHPSTS---- 59
LV+ P P GH+ P ++L L+ L + V ++ +++ S S S
Sbjct: 5 LVFIPSPGIGHLRPTVELAKLLVDSDDRLSITVIIIPSRSGDDASSSAYIASLSASSEDR 64
Query: 60 LQSLVLPQPKWPAGSPATRLLKFMRVLRELHYP-------ALLDWFKSHPSPPVA-ILSD 111
L+ V+ P T + + P L+D + SP +A + D
Sbjct: 65 LRYEVISAGDQPTTEDPT-----FQSYIDNQKPKVRDAVAKLVDDSSTPSSPRLAGFVVD 119
Query: 112 FFLGWTQGLAAELGLPRVVFSPSGAFALSVSF--AMWTDLPTNDDPDNVDALVSFPRVP- 168
F +A E G+P +F S A L + M D D + D+ V VP
Sbjct: 120 MFCTSMIDVANEFGVPSYMFYTSNATFLGLQLHVQMLYDEKKYDVSELEDSEVEL-DVPS 178
Query: 169 -NCPVYPWYQISHLYRTLKEGDPDWDLHRSNMMANKTSW-----GIVFNSFAELERVYID 222
P YP + + + KE P + + GI+ N+ AELE +
Sbjct: 179 LTRP-YPVKCLPSVLLS-KEWLP--------LFLAQARRFREMKGILVNTVAELEPQALK 228
Query: 223 HMKKEMGH-DRVWAVGPVLPPDDDLVESMCRGGSSSVPAHDVLTWLDSRRDESVVYVCFG 281
G V+ VGPVL L S S ++L WLD + +SVV++CFG
Sbjct: 229 FFSGSSGDLPPVYPVGPVL----HLENSGD--DSKDEKQSEILRWLDEQPPKSVVFLCFG 282
Query: 282 SRYVLTAKQIHELAAALEKTDVDFVYCVREPDERHASQDCG------------VLPDGFE 329
S + +Q E+A ALE++ F++ +R AS + +LP+GF
Sbjct: 283 SMGGFSEEQAREIAIALERSGHRFLWSLR-----RASPNIMKEPPGEFTNLEEILPEGFL 337
Query: 330 DRVAGRGYVIRGWSQQVAILRHKAVGAFLTHCGWNSVLEGVSAGVVMLTWPMDADQYTNA 389
DR G VI GW+ QVA+L A+G F+THCGWNS+LE + GV M WP+ A+Q NA
Sbjct: 338 DRTKDIGKVI-GWAPQVAVLAKPAIGGFVTHCGWNSILESLWFGVPMAAWPLYAEQKFNA 396
Query: 390 QLLVDQLGVGIRV-----GE---GTRNIPESDELAR----LLAQSVDGPRRERLKARELS 437
+V++LG+ + + G+ G ++E+ R L+ Q D R+R+K E+S
Sbjct: 397 FEMVEELGLAVEIRKYWRGDLLAGEMETVTAEEIERGIRCLMEQ--DSDVRKRVK--EMS 452
Query: 438 GAALSAVVKGGSSDRDLNDFIKRINE 463
A++ GGSS L FI+ + +
Sbjct: 453 EKCHVALMDGGSSHTALKKFIQDVTK 478
|
Length = 481 |
| >gnl|CDD|177857 PLN02207, PLN02207, UDP-glycosyltransferase | Back alignment and domain information |
|---|
Score = 155 bits (394), Expect = 3e-42
Identities = 140/487 (28%), Positives = 223/487 (45%), Gaps = 64/487 (13%)
Query: 6 AHILVYPFPTSGHIIPLLDLTNRLLTLGLNVTVLITQNNLPLLDSLNANHPSTSLQSLVL 65
A ++ P PT GH++P L+ RL+ + + I L+ +H T ++S+
Sbjct: 4 AELIFIPTPTVGHLVPFLEFARRLIEQDDRIRITIL-----LMKLQGQSHLDTYVKSIAS 58
Query: 66 PQP-----------KWPAGSPATRLLKFMRVLRELHYPALLDWFKSHPSPPV-------A 107
QP + P + ++ + E + P + + S
Sbjct: 59 SQPFVRFIDVPELEEKPTLGGTQSVEAYVYDVIEKNIPLVRNIVMDILSSLALDGVKVKG 118
Query: 108 ILSDFFLGWTQGLAAELGLPRVVF--SPSGAFALSVSFAMWTDLPTNDDPDNVDALVSFP 165
++DFF +A ++ LP VF + SG A+ A T+ N + ++S P
Sbjct: 119 FVADFFCLPMIDVAKDVSLPFYVFLTTNSGFLAMMQYLADRHSKDTSVFVRNSEEMLSIP 178
Query: 166 RVPNCPVYPWYQISHLYRTLKEG-DPDWDLHRSNMMANKTSWGIVFNSFAELERVYIDHM 224
N PV S L+ +++G D L AN GI+ NS ++E ++H
Sbjct: 179 GFVN-PVPANVLPSALF--VEDGYDAYVKLAILFTKAN----GILVNSSFDIEPYSVNHF 231
Query: 225 KKEMGHDRVWAVGPVLP------PDDDLVESMCRGGSSSVPAHDVLTWLDSRRDESVVYV 278
E + V+AVGP+ P+ DL R +++ WLD + + SVV++
Sbjct: 232 LDEQNYPSVYAVGPIFDLKAQPHPEQDLA---RR--------DELMKWLDDQPEASVVFL 280
Query: 279 CFGSRYVLTAKQIHELAAALEKTDVDFVYCVREPDERHASQDCGVLPDGFEDRVAGRGYV 338
CFGS L + E+A LE F++ +R E + D +LP+GF DRV+GRG +
Sbjct: 281 CFGSMGRLRGPLVKEIAHGLELCQYRFLWSLRT--EEVTNDD--LLPEGFLDRVSGRG-M 335
Query: 339 IRGWSQQVAILRHKAVGAFLTHCGWNSVLEGVSAGVVMLTWPMDADQYTNAQLLVDQLGV 398
I GWS QV IL HKAVG F++HCGWNS++E + GV ++TWPM A+Q NA L+V +L +
Sbjct: 336 ICGWSPQVEILAHKAVGGFVSHCGWNSIVESLWFGVPIVTWPMYAEQQLNAFLMVKELKL 395
Query: 399 GIRVGEGTR-------NIPESDELARLLAQSVDGPRRERLKARELSGAALSAVVKGGSSD 451
+ + R N E + R + + R+R+ ++S A GGSS
Sbjct: 396 AVELKLDYRVHSDEIVNANEIETAIRCVMNKDNNVVRKRVM--DISQMIQRATKNGGSSF 453
Query: 452 RDLNDFI 458
+ FI
Sbjct: 454 AAIEKFI 460
|
Length = 468 |
| >gnl|CDD|178275 PLN02670, PLN02670, transferase, transferring glycosyl groups | Back alignment and domain information |
|---|
Score = 153 bits (389), Expect = 2e-41
Identities = 131/461 (28%), Positives = 219/461 (47%), Gaps = 53/461 (11%)
Query: 7 HILVYPFPTSGHIIPLLDLTNRLLTLGLNVTVLITQNNLPLLDSLNANHPST-SLQSLVL 65
H+ ++P+ GH+IP L L+ L G ++ + T NL L + + S+ +L S L
Sbjct: 8 HVAMFPWLAMGHLIPFLRLSKLLAQKGHKISFISTPRNLHRLPKIPSQLSSSITLVSFPL 67
Query: 66 PQ-PKWPAGSPATRLLKF-----MRVLRELHYPALLDWFKSHPSPPVAILSDFFLGWTQG 119
P P P+ + ++ + + ++ +L P L + ++ S P I+ D+ W
Sbjct: 68 PSVPGLPSSAESSTDVPYTKQQLLKKAFDLLEPPLTTFLET--SKPDWIIYDYASHWLPS 125
Query: 120 LAAELGLPRVVFSPSGAFALSV---SFAMWTDLPTNDDPDNVDALVSFPRVPNCPVYPW- 175
+AAELG+ + FS A LS ++ ++ F VP PW
Sbjct: 126 IAAELGISKAFFSLFTAATLSFIGPPSSLMEGGDLRSTAED------FTVVP-----PWV 174
Query: 176 -------YQISHLYRTLKEGDPDW----DLHRSNMMANKTSWGIVFNSFAELERVYIDHM 224
++ + + +++ + D D R + ++ S E E + D +
Sbjct: 175 PFESNIVFRYHEVTKYVEKTEEDETGPSDSVRFGFAIGGSD-VVIIRSSPEFEPEWFDLL 233
Query: 225 KKEMGHDRVWAVGPVLPP---DDDLVESMCRGGSSSVPAHDVLTWLDSRRDESVVYVCFG 281
+ + +G LPP DD+ +++ G + WLD +R SVVYV G
Sbjct: 234 SD-LYRKPIIPIG-FLPPVIEDDEEDDTIDVKGWV-----RIKEWLDKQRVNSVVYVALG 286
Query: 282 SRYVLTAKQIHELAAALEKTDVDFVYCVR-EPDERHASQDCGVLPDGFEDRVAGRGYVIR 340
+ L +++ ELA LEK++ F + +R EP + + +LPDGFE+RV GRG +
Sbjct: 287 TEASLRREEVTELALGLEKSETPFFWVLRNEPGTTQNALE--MLPDGFEERVKGRGMIHV 344
Query: 341 GWSQQVAILRHKAVGAFLTHCGWNSVLEGVSAGVVMLTWPMDADQYTNAQLLVDQLGVGI 400
GW QV IL H++VG FLTHCGWNSV+EG+ G V++ +P+ +Q N +LL + +G+
Sbjct: 345 GWVPQVKILSHESVGGFLTHCGWNSVVEGLGFGRVLILFPVLNEQGLNTRLLHGK-KLGL 403
Query: 401 RVGEGTRNIP-ESDELARLLAQS-VDGPRRE-RLKARELSG 438
V R+ SD +A + + VD E R KA+E+
Sbjct: 404 EVPRDERDGSFTSDSVAESVRLAMVDDAGEEIRDKAKEMRN 444
|
Length = 472 |
| >gnl|CDD|177830 PLN02173, PLN02173, UDP-glucosyl transferase family protein | Back alignment and domain information |
|---|
Score = 151 bits (382), Expect = 9e-41
Identities = 122/473 (25%), Positives = 216/473 (45%), Gaps = 51/473 (10%)
Query: 7 HILVYPFPTSGHIIPLLDLTNRLLTLGLNVTVLITQNNLPLLDSLNANHPSTSLQSLVLP 66
H+L PFP+ GHI P+ RL + G T +T + ++++ + PS+ + +
Sbjct: 7 HVLAVPFPSQGHITPIRQFCKRLHSKGFKTTHTLTTF---IFNTIHLD-PSSPISIATIS 62
Query: 67 QPKWPAG-SPATRLLKFMRVLRELHYPALLDWFKSHPS---PPVAILSDFFLGWTQGLAA 122
G S A + ++++ + + D + H S P I+ D F+ W LA
Sbjct: 63 DGYDQGGFSSAGSVPEYLQNFKTFGSKTVADIIRKHQSTDNPITCIVYDSFMPWALDLAR 122
Query: 123 ELGLPRVVFSPSGAFALSVSFAMWTD-----LPTNDDPD-NVDALVSFPRVPNCPVYPWY 176
E GL F +++ + + LP D P + L +F + Y
Sbjct: 123 EFGLAAAPFFTQSCAVNYINYLSYINNGSLTLPIKDLPLLELQDLPTFVTPTGS--HLAY 180
Query: 177 QISHLYRTLKEGDPDWDLHRSNMMANKTSWGIVFNSFAELERVYIDHMKKEMGHDRVWAV 236
L + D+ ++ NSF +L+ + + K V +
Sbjct: 181 FEMVLQQFTNFDKADF---------------VLVNSFHDLDLHENELLSKVC---PVLTI 222
Query: 237 GPVLPPD--DDLVESMCRGGSSSVPAHD---VLTWLDSRRDESVVYVCFGSRYVLTAKQI 291
GP +P D ++S + + WLD R SVVY+ FGS L+++Q+
Sbjct: 223 GPTVPSMYLDQQIKSDNDYDLNLFDLKEAALCTDWLDKRPQGSVVYIAFGSMAKLSSEQM 282
Query: 292 HELAAALEKTDVDFVYCVREPDERHASQDCGVLPDGFEDRVAGRGYVIRGWSQQVAILRH 351
E+A+A+ ++ +++ VR +E LP GF + V ++ WS Q+ +L +
Sbjct: 283 EEIASAI--SNFSYLWVVRASEESK-------LPPGFLETVDKDKSLVLKWSPQLQVLSN 333
Query: 352 KAVGAFLTHCGWNSVLEGVSAGVVMLTWPMDADQYTNAQLLVDQLGVGIRV-GEGTRNIP 410
KA+G F+THCGWNS +EG+S GV M+ P DQ NA+ + D VG+RV E I
Sbjct: 334 KAIGCFMTHCGWNSTMEGLSLGVPMVAMPQWTDQPMNAKYIQDVWKVGVRVKAEKESGIA 393
Query: 411 ESDELARLLAQSVDGPRRERLK--ARELSGAALSAVVKGGSSDRDLNDFIKRI 461
+ +E+ + + ++G + + +K A + A+ ++ +GGS+D ++N F+ +I
Sbjct: 394 KREEIEFSIKEVMEGEKSKEMKENAGKWRDLAVKSLSEGGSTDININTFVSKI 446
|
Length = 449 |
| >gnl|CDD|178032 PLN02410, PLN02410, UDP-glucoronosyl/UDP-glucosyl transferase family protein | Back alignment and domain information |
|---|
Score = 147 bits (371), Expect = 3e-39
Identities = 120/475 (25%), Positives = 213/475 (44%), Gaps = 41/475 (8%)
Query: 3 PAGAHILVYPFPTSGHIIPLLDLTNRLLTLGLNVTVLITQ-NNLPLLDSLNANHPSTSLQ 61
PA +++ P P GHI P++ L L G ++T+ T+ N D T +
Sbjct: 5 PARRRVVLVPVPAQGHISPMMQLAKTLHLKGFSITIAQTKFNYFSPSDDFTDFQFVTIPE 64
Query: 62 SLVLPQPKWPAGSPATRLLKFMRVLRELHYPALLDWFKSHPSPPVAILSDFFLGWTQGLA 121
SL P+ + P L K + + L + ++ D F+ + + A
Sbjct: 65 SL--PESDFKNLGPIEFLHKLNKECQVSFKDCLGQLVLQQGNEIACVVYDEFMYFAEAAA 122
Query: 122 AELGLPRVVFSPSGAFALSVS------FAMWTDLPTNDDPDNVDALVS--FP-RVPNCPV 172
E LP V+FS + A A +A P + + LV P R + PV
Sbjct: 123 KEFKLPNVIFSTTSATAFVCRSVFDKLYANNVLAPLKEPKGQQNELVPEFHPLRCKDFPV 182
Query: 173 YPWYQISHLYRTLKEGDPDWDLHRSNMMANKTSWGIVFNSFAELERVYIDHMKKEMGHDR 232
W + + +L+R N + +T+ ++ N+ + LE + +++++
Sbjct: 183 SHWASLESIM----------ELYR-NTVDKRTASSVIINTASCLESSSLSRLQQQL-QIP 230
Query: 233 VWAVGPVLPPDDDLVESMCRGGSSSVPAHD--VLTWLDSRRDESVVYVCFGSRYVLTAKQ 290
V+ +GP+ + +S+ + + WL+ ++ SV++V GS ++ +
Sbjct: 231 VYPIGPL---------HLVASAPTSLLEENKSCIEWLNKQKKNSVIFVSLGSLALMEINE 281
Query: 291 IHELAAALEKTDVDFVYCVREPDERHASQDCGVLPDGFEDRVAGRGYVIRGWSQQVAILR 350
+ E A+ L+ ++ F++ +R P S+ LP F ++GRGY+++ W+ Q +L
Sbjct: 282 VMETASGLDSSNQQFLWVIR-PGSVRGSEWIESLPKEFSKIISGRGYIVK-WAPQKEVLS 339
Query: 351 HKAVGAFLTHCGWNSVLEGVSAGVVMLTWPMDADQYTNAQLLVDQLGVGIRV-GEGTRNI 409
H AVG F +HCGWNS LE + GV M+ P +DQ NA+ L +GI+V G+ R
Sbjct: 340 HPAVGGFWSHCGWNSTLESIGEGVPMICKPFSSDQKVNARYLECVWKIGIQVEGDLDRGA 399
Query: 410 PESDELARLLAQSVDGPRRERLKARELSGAALSAVVKGGSSDRDLNDFIKRINEL 464
E + RL+ + R+R A L ++V+ GGSS L +F+ + L
Sbjct: 400 VER-AVKRLMVEEEGEEMRKR--AISLKEQLRASVISGGSSHNSLEEFVHFMRTL 451
|
Length = 451 |
| >gnl|CDD|215127 PLN02210, PLN02210, UDP-glucosyl transferase | Back alignment and domain information |
|---|
Score = 146 bits (370), Expect = 5e-39
Identities = 139/472 (29%), Positives = 215/472 (45%), Gaps = 45/472 (9%)
Query: 7 HILVYPFPTSGHIIPLLDLTN--RLLTLGLNVTVLITQNNLPLLDSLNANHPSTSLQSLV 64
H+L+ GHI P+L L L + L+ T+ T+ LL ++ L
Sbjct: 10 HVLMVTLAFQGHINPMLKLAKHLSLSSKNLHFTLATTEQARDLLSTVEKPRRPVDLVFFS 69
Query: 65 LPQPKWPAGSPATRLLKFMRVLRELHYPALLDWFKSHPSPPVAILSDFFLGWTQGLAAEL 124
PK +P T LLK + + + +++ + I+S F W +AA
Sbjct: 70 DGLPKDDPRAPET-LLKSLNKVGAKNLSKIIEEKRYS-----CIISSPFTPWVPAVAAAH 123
Query: 125 GLPRVVFSPSGAFALSVSFAMWTDLPTNDDPDNVDALVSFPRVPNCPVYPWYQISHLYRT 184
+P + A SV + + + TN PD L + P P ++ L
Sbjct: 124 NIPCAILWIQACGAYSVYYRYY--MKTNSFPD----LEDLNQTVELPALPLLEVRDLPSF 177
Query: 185 LKEGDPDWDLHRSNMMAN------KTSWGIVFNSFAELERVYIDHMKKEMGHDRVWAVGP 238
+ P H +N+MA W +V NSF ELE I+ M V +GP
Sbjct: 178 ML---PSGGAHFNNLMAEFADCLRYVKWVLV-NSFYELESEIIESMAD---LKPVIPIGP 230
Query: 239 VLPP----DDDLVESMCRGGSSSVPAHD--VLTWLDSRRDESVVYVCFGSRYVLTAKQIH 292
++ P DD+ E G + + D + WLD + SVVY+ FGS Q+
Sbjct: 231 LVSPFLLGDDE--EETLDGKNLDMCKSDDCCMEWLDKQARSSVVYISFGSMLESLENQVE 288
Query: 293 ELAAALEKTDVDFVYCVREPDERHASQDCGVLPDGFEDRVAGRGYVIRGWSQQVAILRHK 352
+A AL+ V F++ +R P E+ +Q+ VL + ++ G+G V+ WS Q IL H
Sbjct: 289 TIAKALKNRGVPFLWVIR-PKEK--AQNVQVLQEMVKE---GQGVVLE-WSPQEKILSHM 341
Query: 353 AVGAFLTHCGWNSVLEGVSAGVVMLTWPMDADQYTNAQLLVDQLGVGIRVGEGTRNIP-E 411
A+ F+THCGWNS +E V AGV ++ +P DQ +A+LLVD G+G+R+ + +
Sbjct: 342 AISCFVTHCGWNSTIETVVAGVPVVAYPSWTDQPIDARLLVDVFGIGVRMRNDAVDGELK 401
Query: 412 SDELARLLAQSVDGPRRE--RLKARELSGAALSAVVKGGSSDRDLNDFIKRI 461
+E+ R + +GP R +A EL A A+ GGSS R+L+ FI I
Sbjct: 402 VEEVERCIEAVTEGPAAADIRRRAAELKHVARLALAPGGSSARNLDLFISDI 453
|
Length = 456 |
| >gnl|CDD|177813 PLN02152, PLN02152, indole-3-acetate beta-glucosyltransferase | Back alignment and domain information |
|---|
Score = 141 bits (356), Expect = 5e-37
Identities = 136/486 (27%), Positives = 218/486 (44%), Gaps = 61/486 (12%)
Query: 4 AGAHILVYPFPTSGHIIPLLDLTNRLL-TLGLNVTVLITQNNLPLLDSLNANHPSTSLQS 62
A H L+ FP GH+ P L RL+ T G VT + + S+ NH + S
Sbjct: 2 APPHFLLVTFPAQGHVNPSLRFARRLIKTTGTRVTFATCLSVIH--RSMIPNHNNVENLS 59
Query: 63 LVLPQPKWPAGSPAT------RLLKFMRVLRELHYPALLDWFKSH---PSPPVAILSDFF 113
+ + G + RL+ F R + AL D+ +++ SP ++
Sbjct: 60 FLTFSDGFDDGVISNTDDVQNRLVNFERNGDK----ALSDFIEANLNGDSPVTCLIYTIL 115
Query: 114 LGWTQGLAAELGLPRVVF--SPSGAFALSVSFAM-------WTDLPTNDDPDNVDALVSF 164
W +A LP V+ P+ F + +++ + +LP+ + D L SF
Sbjct: 116 PNWAPKVARRFHLPSVLLWIQPAFVFDIYYNYSTGNNSVFEFPNLPSLEIRD----LPSF 171
Query: 165 --PRVPNCPVYPWYQISHLYRTLKEGDPDWDLHRSNMMANKTSWGIVFNSFAELERVYID 222
P N YQ L LKE +++ I+ N+F LE ++
Sbjct: 172 LSPSNTNKAAQAVYQ--ELMEFLKE---------------ESNPKILVNTFDSLEPEFLT 214
Query: 223 HMKK-EMGHDRVWAVGPVLPPDDDLVESMCRGGSSSVPAHDVLTWLDSRRDESVVYVCFG 281
+ EM AVGP+LP + + S + WLDS+ + SV+YV FG
Sbjct: 215 AIPNIEM-----VAVGPLLPAEIFTGSESGKDLSVRDQSSSYTLWLDSKTESSVIYVSFG 269
Query: 282 SRYVLTAKQIHELAAALEKTDVDFVYCVREPDERHASQDCGVLPD-----GFEDRVAGRG 336
+ L+ KQI ELA AL + F++ + + R A + + GF + G
Sbjct: 270 TMVELSKKQIEELARALIEGKRPFLWVITDKLNREAKIEGEEETEIEKIAGFRHELEEVG 329
Query: 337 YVIRGWSQQVAILRHKAVGAFLTHCGWNSVLEGVSAGVVMLTWPMDADQYTNAQLLVDQL 396
++ W Q+ +LRH+AVG F+THCGW+S LE + GV ++ +PM +DQ NA+LL +
Sbjct: 330 MIV-SWCSQIEVLRHRAVGCFVTHCGWSSSLESLVLGVPVVAFPMWSDQPANAKLLEEIW 388
Query: 397 GVGIRVGEGTRNIPESDELARLLAQSVDGPRRE-RLKARELSGAALSAVVKGGSSDRDLN 455
G+RV E + + E E+ R L ++ E R A + A+ A +GGSSD+++
Sbjct: 389 KTGVRVRENSEGLVERGEIRRCLEAVMEEKSVELRESAEKWKRLAIEAGGEGGSSDKNVE 448
Query: 456 DFIKRI 461
F+K +
Sbjct: 449 AFVKTL 454
|
Length = 455 |
| >gnl|CDD|177807 PLN00414, PLN00414, glycosyltransferase family protein | Back alignment and domain information |
|---|
Score = 123 bits (309), Expect = 1e-30
Identities = 113/410 (27%), Positives = 174/410 (42%), Gaps = 50/410 (12%)
Query: 7 HILVYPFPTSGHIIPLLDLTNRLLTLGLNVTVLITQNNLPLLDSLNANHPSTSLQSLVLP 66
H +YP+ GH+IP L L N+L G VT + + L LN S + L LP
Sbjct: 6 HAFMYPWFGFGHMIPYLHLANKLAEKGHRVTFFLPKKAHKQLQPLNLFPDSIVFEPLTLP 65
Query: 67 QPK-WPAGSPATR---------LLKFMRVLRELHYPALLDWFKSHPSPPVAILSDFFLGW 116
P G+ + M +LR+ A + K P I DF + W
Sbjct: 66 PVDGLPFGAETASDLPNSTKKPIFDAMDLLRD-QIEAKVRALK-----PDLIFFDF-VHW 118
Query: 117 TQGLAAELGLPRVVFSPSGAFALSVSFAMWTDL--PTNDDPDNVDALVSFPRVPNCPVYP 174
+A E G+ V + A +++ A +L P D P + AL R + V
Sbjct: 119 VPEMAKEFGIKSVNYQIISAACVAMVLAPRAELGFPPPDYPLSKVAL----RGHDANVCS 174
Query: 175 WYQISH-LYRTLKEGDPDWDLHRSNMMANKTSWGIVFNSFAELERVYIDHMKKEMGHDRV 233
+ SH L+ + +G + D+ + + ELE D ++++ +V
Sbjct: 175 LFANSHELFGLITKGLKNCDV-------------VSIRTCVELEGNLCDFIERQC-QRKV 220
Query: 234 WAVGPVLPPDDDLVESMCRGGSSSVPAHDVLT-WLDSRRDESVVYVCFGSRYVLTAKQIH 292
GP+LP S P D WL+ SVV+ FG+++ Q
Sbjct: 221 LLTGPMLPEPQ---------NKSGKPLEDRWNHWLNGFEPGSVVFCAFGTQFFFEKDQFQ 271
Query: 293 ELAAALEKTDVDFVYCVREPDERHASQDCGVLPDGFEDRVAGRGYVIRGWSQQVAILRHK 352
E +E T + F+ V P Q+ LP+GFE+RV GRG V GW +Q IL H
Sbjct: 272 EFCLGMELTGLPFLIAVMPPKGSSTVQE--ALPEGFEERVKGRGIVWEGWVEQPLILSHP 329
Query: 353 AVGAFLTHCGWNSVLEGVSAGVVMLTWPMDADQYTNAQLLVDQLGVGIRV 402
+VG F+ HCG+ S+ E + + ++ P ADQ +LL ++L V ++V
Sbjct: 330 SVGCFVNHCGFGSMWESLVSDCQIVFIPQLADQVLITRLLTEELEVSVKV 379
|
Length = 446 |
| >gnl|CDD|178364 PLN02764, PLN02764, glycosyltransferase family protein | Back alignment and domain information |
|---|
Score = 121 bits (305), Expect = 4e-30
Identities = 117/412 (28%), Positives = 179/412 (43%), Gaps = 50/412 (12%)
Query: 7 HILVYPFPTSGHIIPLLDLTNRLLTLGLNVTVLITQNNLPLLDSLNANHPSTSLQSLVLP 66
H+L+YP+ +GH+ P L L N+L G VT L+ + L L+ LN + +S+ +P
Sbjct: 7 HVLMYPWFATGHMTPFLFLANKLAEKGHTVTFLLPKKALKQLEHLNLFPHNIVFRSVTVP 66
Query: 67 Q-PKWPAGS------PATR---LLKFMRVLRELHYPALLDWFKSHPSPPVAILSDFFLGW 116
P G+ P T L+ M + R+ + P I DF W
Sbjct: 67 HVDGLPVGTETVSEIPVTSADLLMSAMDLTRDQVEVVV------RAVEPDLIFFDF-AHW 119
Query: 117 TQGLAAELGLPRVVFSPSGAFALSVSFAMWTDLPTNDDPDNVDALVSFPRVPNCPVYPWY 176
+A + GL V + A ++ +L V P P+ V
Sbjct: 120 IPEVARDFGLKTVKYVVVSASTIASMLVPGGELG-----------VPPPGYPSSKVLLRK 168
Query: 177 QISHLYRTLKEGDPDWDLHRS-NMMANKT-----SWGIVFNSFAELERVYIDHMKKEMGH 230
Q ++ T+K +P + N++ T S I + E+E + D+++K
Sbjct: 169 QDAY---TMKNLEPTNTIDVGPNLLERVTTSLMNSDVIAIRTAREIEGNFCDYIEKHC-R 224
Query: 231 DRVWAVGPVLPPDDDLVESMCRGGSSSVPAHDVLTWLDSRRDESVVYVCFGSRYVLTAKQ 290
+V GPV P D E R + WL +SVV+ GS+ +L Q
Sbjct: 225 KKVLLTGPVFPEPDKTRELEERW----------VKWLSGYEPDSVVFCALGSQVILEKDQ 274
Query: 291 IHELAAALEKTDVDFVYCVREPDERHASQDCGVLPDGFEDRVAGRGYVIRGWSQQVAILR 350
EL +E T F+ V+ P R +S LP+GFE+RV GRG V GW QQ IL
Sbjct: 275 FQELCLGMELTGSPFLVAVKPP--RGSSTIQEALPEGFEERVKGRGVVWGGWVQQPLILS 332
Query: 351 HKAVGAFLTHCGWNSVLEGVSAGVVMLTWPMDADQYTNAQLLVDQLGVGIRV 402
H +VG F++HCG+ S+ E + + ++ P DQ N +LL D+L V + V
Sbjct: 333 HPSVGCFVSHCGFGSMWESLLSDCQIVLVPQLGDQVLNTRLLSDELKVSVEV 384
|
Length = 453 |
| >gnl|CDD|215305 PLN02562, PLN02562, UDP-glycosyltransferase | Back alignment and domain information |
|---|
Score = 102 bits (256), Expect = 1e-23
Identities = 60/180 (33%), Positives = 100/180 (55%), Gaps = 14/180 (7%)
Query: 264 LTWLDSRRDESVVYVCFGSRYV--LTAKQIHELAAALEKTDVDFVYCVREPDERHASQDC 321
L WL ++ SV+Y+ FGS +V + + LA ALE + F++ + P R
Sbjct: 264 LGWLQEQKPNSVIYISFGS-WVSPIGESNVRTLALALEASGRPFIWVLN-PVWREG---- 317
Query: 322 GVLPDGFEDRVAGRGYVIRGWSQQVAILRHKAVGAFLTHCGWNSVLEGVSAGVVMLTWPM 381
LP G+ +RV+ +G V+ W+ Q+ +L+H+AVG +LTHCGWNS +E + +L +P+
Sbjct: 318 --LPPGYVERVSKQGKVV-SWAPQLEVLKHQAVGCYLTHCGWNSTMEAIQCQKRLLCYPV 374
Query: 382 DADQYTNAQLLVDQLGVGIRV-GEGTRNIPESDELARLLAQSVDGPRRERLKARELSGAA 440
DQ+ N +VD +G+R+ G G + + E L +++ S G R +L+ R + A
Sbjct: 375 AGDQFVNCAYIVDVWKIGVRISGFGQKEVEEG--LRKVMEDSGMGERLMKLRERAMGEEA 432
|
Length = 448 |
| >gnl|CDD|177858 PLN02208, PLN02208, glycosyltransferase family protein | Back alignment and domain information |
|---|
Score = 97.0 bits (241), Expect = 9e-22
Identities = 60/196 (30%), Positives = 97/196 (49%), Gaps = 15/196 (7%)
Query: 208 IVFNSFAELERVYIDHMKKEMGHDRVWAVGPVLPPDDDLVESMCRGGSSSVPAHDVLTWL 267
I + E+E + D++ ++ H +V GP+ P D +S P + +
Sbjct: 197 IALRTCKEIEGKFCDYISRQY-HKKVLLTGPMFPEPD-----------TSKPLEEQWSHF 244
Query: 268 DSR-RDESVVYVCFGSRYVLTAKQIHELAAALEKTDVDFVYCVREPDERHASQDCGVLPD 326
S +SVV+ GS+ +L Q EL +E T + F+ V+ P R +S LP+
Sbjct: 245 LSGFPPKSVVFCSLGSQIILEKDQFQELCLGMELTGLPFLIAVKPP--RGSSTVQEGLPE 302
Query: 327 GFEDRVAGRGYVIRGWSQQVAILRHKAVGAFLTHCGWNSVLEGVSAGVVMLTWPMDADQY 386
GFE+RV GRG V GW QQ IL H ++G F+ HCG ++ E + + M+ P +DQ
Sbjct: 303 GFEERVKGRGVVWGGWVQQPLILDHPSIGCFVNHCGPGTIWESLVSDCQMVLIPFLSDQV 362
Query: 387 TNAQLLVDQLGVGIRV 402
+L+ ++ V + V
Sbjct: 363 LFTRLMTEEFEVSVEV 378
|
Length = 442 |
| >gnl|CDD|99960 cd03784, GT1_Gtf_like, This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin | Back alignment and domain information |
|---|
Score = 88.6 bits (220), Expect = 4e-19
Identities = 75/441 (17%), Positives = 118/441 (26%), Gaps = 74/441 (16%)
Query: 7 HILVYPFPTSGHIIPLLDLTNRLLTLGLNVTVLITQNNLPLLDSLNANH---PSTSLQSL 63
+L+ + G + PL+ L L G V V L+++ + L
Sbjct: 2 RVLITTIGSRGDVQPLVALAWALRAAGHEVRVATPPEFADLVEAAGLEFVPVGGDPDELL 61
Query: 64 VLPQPKWPAGSPATRLLKFMRVLRELHYPALLD--WFKSHPSPPVAILSDFFLGWTQGLA 121
P+ LL L A+LD + P +++D A
Sbjct: 62 ASPERNAGLLLLGPGLLLGALRLLRREAEAMLDDLVAAARDWGPDLVVADPLAFAGAVAA 121
Query: 122 AELGLPRVVFSPSGAFALSVSFAMWTDLPTNDDPDNVDALVSFPRVP-NCPVYPWYQISH 180
LG+P L + P N+ + W +
Sbjct: 122 EALGIP-------AVRLLLGPDTPTSAFPPPLGRANLRLYALLEAELWQDLLGAWLR--A 172
Query: 181 LYRTLKEGDPDWDLHRSNMMANKTSWGIVFNSFAELERVYIDHMKKEMGHDRVWAVGPVL 240
R L ++ P +
Sbjct: 173 RRRRLGLPPLSLLDGS--------------------------------DVPELYGFSPAV 200
Query: 241 ---PPDDDLVESMCRGGSSSVPAH---DVLTWLDSRRDESVVYVCFGSRYVLTAKQIHEL 294
PPD + + G VP + WL VYV FGS V + + L
Sbjct: 201 LPPPPDWPRFDLVTGYGFRDVPYNGPPPPELWLFLAAGRPPVYVGFGSMVVRDPEALARL 260
Query: 295 AA-ALEKTDVDFVYCVREPDERHASQDCGVLPDGFEDRVAGRGYVIRGWSQQVAILRHKA 353
A+ + + LPD + + +L
Sbjct: 261 DVEAVATLGQRAILSLGWGGLGAED-----LPDNVR---------VVDFVPHDWLLPR-- 304
Query: 354 VGAFLTHCGWNSVLEGVSAGVVMLTWPMDADQYTNAQLLVDQLGVGIRVGEGTRNIPESD 413
A + H G + + AGV L P DQ A V +LG G + ++
Sbjct: 305 CAAVVHHGGAGTTAAALRAGVPQLVVPFFGDQPFWAA-RVAELGAGPAL---DPRELTAE 360
Query: 414 ELARLLAQSVDGPRRERLKAR 434
LA L + +D P R R A
Sbjct: 361 RLAAALRRLLDPPSRRRAAAL 381
|
Gtfs transfer sugar moieties from an activated NDP-sugar donor to the oxidatively cross-linked heptapeptide core of vancomycin group antibiotics. The core structure is important for the bioactivity of the antibiotics. Length = 401 |
| >gnl|CDD|201077 pfam00201, UDPGT, UDP-glucoronosyl and UDP-glucosyl transferase | Back alignment and domain information |
|---|
Score = 72.1 bits (177), Expect = 2e-13
Identities = 44/194 (22%), Positives = 73/194 (37%), Gaps = 31/194 (15%)
Query: 238 PVLPPDDDLVESMCRGGSSSVPA--HDVLTWLD--SRRDESVVYVCFGSRYV-LTAKQIH 292
P+LP + + GG + PA S + VV GS + ++ +
Sbjct: 243 PLLPNMEFI------GGLNCKPAKPLPQEMEAFVQSSGEHGVVVFSLGSMVSNIPEEKAN 296
Query: 293 ELAAALEKTDVDFVYCVREPDERHASQDCGVLPDGFEDRVAGRGYVIRGWSQQVAILRHK 352
E+A+AL + ++ GR + W Q +L H
Sbjct: 297 EIASALAQIPQKVLWRFDG------------TKPST----LGRNTRLVKWLPQNDLLGHP 340
Query: 353 AVGAFLTHCGWNSVLEGVSAGVVMLTWPMDADQYTNAQLLVDQLGVGIRVGEGTRNIPES 412
AF+TH G N V E + GV M+ P+ DQ NA+ + + G + + T S
Sbjct: 341 KTRAFVTHAGSNGVYEAICHGVPMVGMPLFGDQMDNAKHMEAK-GAAVTLNVLTMT---S 396
Query: 413 DELARLLAQSVDGP 426
++L L ++ P
Sbjct: 397 EDLLNALKTVINDP 410
|
Length = 500 |
| >gnl|CDD|223071 PHA03392, egt, ecdysteroid UDP-glucosyltransferase; Provisional | Back alignment and domain information |
|---|
Score = 59.6 bits (145), Expect = 2e-09
Identities = 50/178 (28%), Positives = 74/178 (41%), Gaps = 23/178 (12%)
Query: 259 PAHDVLTWLDSRRDESVVYVCFGSRYVLTAKQIH-ELAAALEKTDVDFVYCV--REPDER 315
P D L + VVYV FGS + + E L +T Y V + E
Sbjct: 282 PLDDYLEEFLNNSTNGVVYVSFGS--SIDTNDMDNEFLQMLLRTFKKLPYNVLWKYDGEV 339
Query: 316 HASQDCGVLPDGFEDRVAGRGYVIRGWSQQVAILRHKAVGAFLTHCGWNSVLEGVSAGVV 375
A LP + + W Q A+L+HK V AF+T G S E + A V
Sbjct: 340 EAI----NLPANV---------LTQKWFPQRAVLKHKNVKAFVTQGGVQSTDEAIDALVP 386
Query: 376 MLTWPMDADQYTNAQLLVDQLGVGIRVGEGTRNIPESDELARLLAQSVDGPR-RERLK 432
M+ PM DQ+ N V +LG+G + T + + +L + ++ P+ R+ LK
Sbjct: 387 MVGLPMMGDQFYNTNKYV-ELGIGRAL--DTVTV-SAAQLVLAIVDVIENPKYRKNLK 440
|
Length = 507 |
| >gnl|CDD|233407 TIGR01426, MGT, glycosyltransferase, MGT family | Back alignment and domain information |
|---|
Score = 58.2 bits (141), Expect = 3e-09
Identities = 90/444 (20%), Positives = 141/444 (31%), Gaps = 76/444 (17%)
Query: 13 FPTSGHIIPLLDLTNRLLTLGLNVTVLITQNNLPLLDSLNANHPS--TSLQSLVLPQPKW 70
P GH+ P L + L+ G VT T+ +++ A ++L P
Sbjct: 3 IPAHGHVNPTLGVVEELVARGHRVTYATTEEFAERVEAAGAEFVLYGSALPPPDNPPENT 62
Query: 71 PAGSPATRLLKFMRV-LRELHYPALLDWFKSHPSPPVAILSDFFLGWTQGLAAELGLPRV 129
P + K + L P L + +K P I+ D + LA + +P
Sbjct: 63 E-EEPIDIIEKLLDEAEDVL--PQLEEAYKG--DRPDLIVYDIASWTGRLLARKWDVP-- 115
Query: 130 VFSPSGAFALSVSFAMWTDLPTNDDPDNVDALVSFPRVPNCPVYPWYQISHLYRTLKE-- 187
+ +FA + P + ++ L L+E
Sbjct: 116 ------VISSFPTFAANEEFEEMVSPAGEGSAEEGAIAERGLAE---YVARLSALLEEHG 166
Query: 188 --GDPDWDLHRSNMMANKTSWGIVFNSFAELERVYIDHMKKEMGHDRVWAVGPVLPPDDD 245
P L A + +V+ + + E D VGP +
Sbjct: 167 ITTPPVEFL-----AAPRRDLNLVY-----TPKAFQPAG--ETFDDSFTFVGPCIGD--- 211
Query: 246 LVESMCRGGSSSVPAHDVLTWLDSRRDESVVYVCFGSRYVLTAKQIHELAAALEKTDVDF 305
+ +W VV + G+ + A D
Sbjct: 212 --------------RKEDGSWERPGDGRPVVLISLGTVFNNQPSFYRTCVEAFRDLDWHV 257
Query: 306 VYCV-REPDERHASQDCGVLPDGFEDRVAGRGYVIRGWSQQVAILRHKAVGAFLTHCGWN 364
V V R D D G LP E +R W Q+ IL+ AF+TH G N
Sbjct: 258 VLSVGRGVD----PADLGELPPNVE---------VRQWVPQLEILKKAD--AFITHGGMN 302
Query: 365 SVLEGVSAGVVMLTWPMDADQYTNAQLLVDQLGVGIRVGEGTRNIPESDELARLLAQSVD 424
S +E + GV M+ P ADQ A+ + + LG+G + + +LA D
Sbjct: 303 STMEALFNGVPMVAVPQGADQPMTARRIAE-LGLGRHL--PPEEVTAEKLREAVLAVLSD 359
Query: 425 GPRRERLKA-----RELSGAALSA 443
ERL+ RE GA +A
Sbjct: 360 PRYAERLRKMRAEIREAGGARRAA 383
|
This model describes the MGT (macroside glycosyltransferase) subfamily of the UDP-glucuronosyltransferase family. Members include a number of glucosyl transferases for macrolide antibiotic inactivation, but also include transferases of glucose-related sugars for macrolide antibiotic production [Cellular processes, Toxin production and resistance]. Length = 392 |
| >gnl|CDD|224732 COG1819, COG1819, Glycosyl transferases, related to UDP-glucuronosyltransferase [Carbohydrate transport and metabolism / Signal transduction mechanisms] | Back alignment and domain information |
|---|
Score = 54.7 bits (132), Expect = 4e-08
Identities = 42/187 (22%), Positives = 72/187 (38%), Gaps = 25/187 (13%)
Query: 259 PAHDVLTWLDSRRDESVVYVCFGSRYVLTAKQIHELA-AALEKTDVDFVYCVREPDERHA 317
A+++ W+ + D +VYV G+ V A ++ + AL DV + + R
Sbjct: 225 AANELPYWIPA--DRPIVYVSLGT--VGNAVELLAIVLEALADLDVRVIVSL--GGARDT 278
Query: 318 SQDCGVLPDGFEDRVAGRGYVIRGWSQQVAILRHKAVGAFLTHCGWNSVLEGVSAGVVML 377
+ +PD + + Q+ +L A + H G + E + AGV ++
Sbjct: 279 LVN---VPDNVI---------VADYVPQLELLPR--ADAVIHHGGAGTTSEALYAGVPLV 324
Query: 378 TWPMDADQYTNAQLLVDQLGVGIRVGEGTRNIPE-SDELARLLAQSVDGPRRERLKAREL 436
P ADQ NA+ V++LG GI + + +LA D RR + E
Sbjct: 325 VIPDGADQPLNAE-RVEELGAGIALPFEELTEERLRAAVNEVLAD--DSYRRAAERLAEE 381
Query: 437 SGAALSA 443
Sbjct: 382 FKEEDGP 388
|
Length = 406 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 473 | |||
| PLN02863 | 477 | UDP-glucoronosyl/UDP-glucosyl transferase family p | 100.0 | |
| PLN02992 | 481 | coniferyl-alcohol glucosyltransferase | 100.0 | |
| PLN02534 | 491 | UDP-glycosyltransferase | 100.0 | |
| PLN03007 | 482 | UDP-glucosyltransferase family protein | 100.0 | |
| PLN02670 | 472 | transferase, transferring glycosyl groups | 100.0 | |
| PLN02173 | 449 | UDP-glucosyl transferase family protein | 100.0 | |
| PLN02410 | 451 | UDP-glucoronosyl/UDP-glucosyl transferase family p | 100.0 | |
| PLN02208 | 442 | glycosyltransferase family protein | 100.0 | |
| PLN02555 | 480 | limonoid glucosyltransferase | 100.0 | |
| PLN02764 | 453 | glycosyltransferase family protein | 100.0 | |
| PLN03015 | 470 | UDP-glucosyl transferase | 100.0 | |
| PLN02562 | 448 | UDP-glycosyltransferase | 100.0 | |
| PLN02210 | 456 | UDP-glucosyl transferase | 100.0 | |
| PLN03004 | 451 | UDP-glycosyltransferase | 100.0 | |
| PLN02207 | 468 | UDP-glycosyltransferase | 100.0 | |
| PLN02152 | 455 | indole-3-acetate beta-glucosyltransferase | 100.0 | |
| PLN00164 | 480 | glucosyltransferase; Provisional | 100.0 | |
| PLN00414 | 446 | glycosyltransferase family protein | 100.0 | |
| PLN02554 | 481 | UDP-glycosyltransferase family protein | 100.0 | |
| PLN02448 | 459 | UDP-glycosyltransferase family protein | 100.0 | |
| PLN02167 | 475 | UDP-glycosyltransferase family protein | 100.0 | |
| PHA03392 | 507 | egt ecdysteroid UDP-glucosyltransferase; Provision | 100.0 | |
| PF00201 | 500 | UDPGT: UDP-glucoronosyl and UDP-glucosyl transfera | 100.0 | |
| TIGR01426 | 392 | MGT glycosyltransferase, MGT family. This model de | 100.0 | |
| cd03784 | 401 | GT1_Gtf_like This family includes the Gtfs, a grou | 100.0 | |
| KOG1192 | 496 | consensus UDP-glucuronosyl and UDP-glucosyl transf | 100.0 | |
| COG1819 | 406 | Glycosyl transferases, related to UDP-glucuronosyl | 100.0 | |
| PRK12446 | 352 | undecaprenyldiphospho-muramoylpentapeptide beta-N- | 99.96 | |
| PF13528 | 318 | Glyco_trans_1_3: Glycosyl transferase family 1 | 99.93 | |
| COG0707 | 357 | MurG UDP-N-acetylglucosamine:LPS N-acetylglucosami | 99.92 | |
| TIGR00661 | 321 | MJ1255 conserved hypothetical protein. This model | 99.9 | |
| PRK00726 | 357 | murG undecaprenyldiphospho-muramoylpentapeptide be | 99.86 | |
| cd03785 | 350 | GT1_MurG MurG is an N-acetylglucosaminyltransferas | 99.81 | |
| TIGR01133 | 348 | murG undecaprenyldiphospho-muramoylpentapeptide be | 99.75 | |
| TIGR00215 | 385 | lpxB lipid-A-disaccharide synthase. Lipid-A precur | 99.74 | |
| PRK13609 | 380 | diacylglycerol glucosyltransferase; Provisional | 99.72 | |
| TIGR03590 | 279 | PseG pseudaminic acid biosynthesis-associated prot | 99.68 | |
| COG4671 | 400 | Predicted glycosyl transferase [General function p | 99.66 | |
| PRK13608 | 391 | diacylglycerol glucosyltransferase; Provisional | 99.66 | |
| PRK00025 | 380 | lpxB lipid-A-disaccharide synthase; Reviewed | 99.62 | |
| PLN02605 | 382 | monogalactosyldiacylglycerol synthase | 99.54 | |
| PF04101 | 167 | Glyco_tran_28_C: Glycosyltransferase family 28 C-t | 99.48 | |
| TIGR03492 | 396 | conserved hypothetical protein. This protein famil | 99.44 | |
| cd03814 | 364 | GT1_like_2 This family is most closely related to | 99.4 | |
| PF03033 | 139 | Glyco_transf_28: Glycosyltransferase family 28 N-t | 99.34 | |
| COG3980 | 318 | spsG Spore coat polysaccharide biosynthesis protei | 99.27 | |
| PLN02871 | 465 | UDP-sulfoquinovose:DAG sulfoquinovosyltransferase | 99.26 | |
| cd03823 | 359 | GT1_ExpE7_like This family is most closely related | 99.25 | |
| cd04962 | 371 | GT1_like_5 This family is most closely related to | 99.2 | |
| cd03817 | 374 | GT1_UGDG_like This family is most closely related | 99.19 | |
| cd03794 | 394 | GT1_wbuB_like This family is most closely related | 99.18 | |
| cd03800 | 398 | GT1_Sucrose_synthase This family is most closely r | 99.18 | |
| cd03801 | 374 | GT1_YqgM_like This family is most closely related | 99.17 | |
| cd03798 | 377 | GT1_wlbH_like This family is most closely related | 99.15 | |
| cd03808 | 359 | GT1_cap1E_like This family is most closely related | 99.14 | |
| PRK05749 | 425 | 3-deoxy-D-manno-octulosonic-acid transferase; Revi | 99.12 | |
| TIGR00236 | 365 | wecB UDP-N-acetylglucosamine 2-epimerase. Epimeras | 99.11 | |
| cd03820 | 348 | GT1_amsD_like This family is most closely related | 99.09 | |
| cd03816 | 415 | GT1_ALG1_like This family is most closely related | 99.09 | |
| PRK10307 | 412 | putative glycosyl transferase; Provisional | 99.06 | |
| cd03825 | 365 | GT1_wcfI_like This family is most closely related | 99.05 | |
| cd03818 | 396 | GT1_ExpC_like This family is most closely related | 99.04 | |
| cd03786 | 363 | GT1_UDP-GlcNAc_2-Epimerase Bacterial members of th | 99.04 | |
| cd03795 | 357 | GT1_like_4 This family is most closely related to | 99.01 | |
| PRK14089 | 347 | ipid-A-disaccharide synthase; Provisional | 98.99 | |
| TIGR03449 | 405 | mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-ino | 98.97 | |
| PF04007 | 335 | DUF354: Protein of unknown function (DUF354); Inte | 98.96 | |
| cd03822 | 366 | GT1_ecORF704_like This family is most closely rela | 98.95 | |
| cd03821 | 375 | GT1_Bme6_like This family is most closely related | 98.93 | |
| cd03807 | 365 | GT1_WbnK_like This family is most closely related | 98.86 | |
| cd03799 | 355 | GT1_amsK_like This is a family of GT1 glycosyltran | 98.86 | |
| cd03796 | 398 | GT1_PIG-A_like This family is most closely related | 98.85 | |
| cd03805 | 392 | GT1_ALG2_like This family is most closely related | 98.84 | |
| COG1519 | 419 | KdtA 3-deoxy-D-manno-octulosonic-acid transferase | 98.81 | |
| cd03819 | 355 | GT1_WavL_like This family is most closely related | 98.81 | |
| cd05844 | 367 | GT1_like_7 Glycosyltransferases catalyze the trans | 98.8 | |
| PRK09922 | 359 | UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D | 98.79 | |
| TIGR02472 | 439 | sucr_P_syn_N sucrose-phosphate synthase, putative, | 98.79 | |
| cd03811 | 353 | GT1_WabH_like This family is most closely related | 98.71 | |
| cd04951 | 360 | GT1_WbdM_like This family is most closely related | 98.71 | |
| PRK01021 | 608 | lpxB lipid-A-disaccharide synthase; Reviewed | 98.65 | |
| PF02350 | 346 | Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; | 98.65 | |
| TIGR03568 | 365 | NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase, | 98.64 | |
| PF02684 | 373 | LpxB: Lipid-A-disaccharide synthetase; InterPro: I | 98.64 | |
| cd03802 | 335 | GT1_AviGT4_like This family is most closely relate | 98.64 | |
| cd04955 | 363 | GT1_like_6 This family is most closely related to | 98.64 | |
| COG0763 | 381 | LpxB Lipid A disaccharide synthetase [Cell envelop | 98.64 | |
| TIGR02149 | 388 | glgA_Coryne glycogen synthase, Corynebacterium fam | 98.62 | |
| cd03812 | 358 | GT1_CapH_like This family is most closely related | 98.58 | |
| TIGR03088 | 374 | stp2 sugar transferase, PEP-CTERM/EpsH1 system ass | 98.55 | |
| cd03809 | 365 | GT1_mtfB_like This family is most closely related | 98.54 | |
| cd03792 | 372 | GT1_Trehalose_phosphorylase Trehalose phosphorylas | 98.52 | |
| TIGR02468 | 1050 | sucrsPsyn_pln sucrose phosphate synthase/possible | 98.51 | |
| COG0381 | 383 | WecB UDP-N-acetylglucosamine 2-epimerase [Cell env | 98.49 | |
| PRK15179 | 694 | Vi polysaccharide biosynthesis protein TviE; Provi | 98.41 | |
| PRK15427 | 406 | colanic acid biosynthesis glycosyltransferase WcaL | 98.41 | |
| PLN02275 | 371 | transferase, transferring glycosyl groups | 98.4 | |
| TIGR03087 | 397 | stp1 sugar transferase, PEP-CTERM/EpsH1 system ass | 98.38 | |
| TIGR02470 | 784 | sucr_synth sucrose synthase. This model represents | 98.36 | |
| PLN02846 | 462 | digalactosyldiacylglycerol synthase | 98.36 | |
| KOG3349 | 170 | consensus Predicted glycosyltransferase [General f | 98.35 | |
| PLN00142 | 815 | sucrose synthase | 98.12 | |
| cd03804 | 351 | GT1_wbaZ_like This family is most closely related | 98.1 | |
| cd03791 | 476 | GT1_Glycogen_synthase_DULL1_like This family is mo | 98.02 | |
| PRK00654 | 466 | glgA glycogen synthase; Provisional | 98.01 | |
| PLN02949 | 463 | transferase, transferring glycosyl groups | 98.0 | |
| cd03806 | 419 | GT1_ALG11_like This family is most closely related | 97.99 | |
| COG5017 | 161 | Uncharacterized conserved protein [Function unknow | 97.87 | |
| TIGR02095 | 473 | glgA glycogen/starch synthases, ADP-glucose type. | 97.86 | |
| cd04950 | 373 | GT1_like_1 Glycosyltransferases catalyze the trans | 97.84 | |
| PF13844 | 468 | Glyco_transf_41: Glycosyl transferase family 41; P | 97.83 | |
| PLN02501 | 794 | digalactosyldiacylglycerol synthase | 97.67 | |
| cd04949 | 372 | GT1_gtfA_like This family is most closely related | 97.66 | |
| cd04946 | 407 | GT1_AmsK_like This family is most closely related | 97.64 | |
| cd03813 | 475 | GT1_like_3 This family is most closely related to | 97.61 | |
| TIGR02918 | 500 | accessory Sec system glycosylation protein GtfA. M | 97.51 | |
| PF00534 | 172 | Glycos_transf_1: Glycosyl transferases group 1; In | 97.49 | |
| PRK10125 | 405 | putative glycosyl transferase; Provisional | 97.46 | |
| PLN02316 | 1036 | synthase/transferase | 97.43 | |
| PRK15484 | 380 | lipopolysaccharide 1,2-N-acetylglucosaminetransfer | 97.42 | |
| TIGR02193 | 319 | heptsyl_trn_I lipopolysaccharide heptosyltransfera | 97.14 | |
| PRK09814 | 333 | beta-1,6-galactofuranosyltransferase; Provisional | 97.0 | |
| PRK15490 | 578 | Vi polysaccharide biosynthesis protein TviE; Provi | 96.99 | |
| PF13692 | 135 | Glyco_trans_1_4: Glycosyl transferases group 1; PD | 96.94 | |
| COG1817 | 346 | Uncharacterized protein conserved in archaea [Func | 96.88 | |
| PF13477 | 139 | Glyco_trans_4_2: Glycosyl transferase 4-like | 96.84 | |
| PRK10017 | 426 | colanic acid biosynthesis protein; Provisional | 96.83 | |
| cd01635 | 229 | Glycosyltransferase_GTB_type Glycosyltransferases | 96.79 | |
| PRK10422 | 352 | lipopolysaccharide core biosynthesis protein; Prov | 96.67 | |
| PF06722 | 97 | DUF1205: Protein of unknown function (DUF1205); In | 96.52 | |
| TIGR02201 | 344 | heptsyl_trn_III lipopolysaccharide heptosyltransfe | 96.32 | |
| PF13579 | 160 | Glyco_trans_4_4: Glycosyl transferase 4-like domai | 96.28 | |
| COG0859 | 334 | RfaF ADP-heptose:LPS heptosyltransferase [Cell env | 96.18 | |
| PRK10916 | 348 | ADP-heptose:LPS heptosyltransferase II; Provisiona | 95.99 | |
| PHA01633 | 335 | putative glycosyl transferase group 1 | 95.94 | |
| COG3914 | 620 | Spy Predicted O-linked N-acetylglucosamine transfe | 95.69 | |
| KOG4626 | 966 | consensus O-linked N-acetylglucosamine transferase | 95.61 | |
| PF13524 | 92 | Glyco_trans_1_2: Glycosyl transferases group 1 | 95.42 | |
| TIGR02195 | 334 | heptsyl_trn_II lipopolysaccharide heptosyltransfer | 95.38 | |
| cd03789 | 279 | GT1_LPS_heptosyltransferase Lipopolysaccharide hep | 95.19 | |
| PRK14098 | 489 | glycogen synthase; Provisional | 94.96 | |
| COG1618 | 179 | Predicted nucleotide kinase [Nucleotide transport | 94.7 | |
| PF01975 | 196 | SurE: Survival protein SurE; InterPro: IPR002828 T | 94.49 | |
| PHA01630 | 331 | putative group 1 glycosyl transferase | 94.24 | |
| PF06258 | 311 | Mito_fiss_Elm1: Mitochondrial fission ELM1; InterP | 93.32 | |
| TIGR03713 | 519 | acc_sec_asp1 accessory Sec system protein Asp1. Th | 93.25 | |
| PF12000 | 171 | Glyco_trans_4_3: Gkycosyl transferase family 4 gro | 93.18 | |
| PF13439 | 177 | Glyco_transf_4: Glycosyltransferase Family 4; PDB: | 92.85 | |
| PF08660 | 170 | Alg14: Oligosaccharide biosynthesis protein Alg14 | 90.73 | |
| KOG2941 | 444 | consensus Beta-1,4-mannosyltransferase [Posttransl | 90.63 | |
| PLN02939 | 977 | transferase, transferring glycosyl groups | 89.97 | |
| COG0496 | 252 | SurE Predicted acid phosphatase [General function | 89.74 | |
| TIGR00715 | 256 | precor6x_red precorrin-6x reductase. This enzyme w | 89.21 | |
| PRK13933 | 253 | stationary phase survival protein SurE; Provisiona | 87.86 | |
| PRK08057 | 248 | cobalt-precorrin-6x reductase; Reviewed | 86.99 | |
| smart00851 | 90 | MGS MGS-like domain. This domain composes the whol | 86.85 | |
| PF04464 | 369 | Glyphos_transf: CDP-Glycerol:Poly(glycerophosphate | 86.76 | |
| TIGR02400 | 456 | trehalose_OtsA alpha,alpha-trehalose-phosphate syn | 86.64 | |
| COG0003 | 322 | ArsA Predicted ATPase involved in chromosome parti | 86.0 | |
| PRK10964 | 322 | ADP-heptose:LPS heptosyl transferase I; Provisiona | 85.69 | |
| TIGR02919 | 438 | accessory Sec system glycosyltransferase GtfB. Mem | 85.67 | |
| COG0438 | 381 | RfaG Glycosyltransferase [Cell envelope biogenesis | 85.47 | |
| PRK12342 | 254 | hypothetical protein; Provisional | 85.29 | |
| PRK13935 | 253 | stationary phase survival protein SurE; Provisiona | 85.15 | |
| cd01424 | 110 | MGS_CPS_II Methylglyoxal synthase-like domain from | 84.88 | |
| PF01012 | 164 | ETF: Electron transfer flavoprotein domain; InterP | 84.88 | |
| PF10093 | 374 | DUF2331: Uncharacterized protein conserved in bact | 83.98 | |
| COG4370 | 412 | Uncharacterized protein conserved in bacteria [Fun | 83.79 | |
| cd03788 | 460 | GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a | 83.55 | |
| PF09314 | 185 | DUF1972: Domain of unknown function (DUF1972); Int | 83.52 | |
| PRK14099 | 485 | glycogen synthase; Provisional | 83.4 | |
| PF04413 | 186 | Glycos_transf_N: 3-Deoxy-D-manno-octulosonic-acid | 82.93 | |
| COG1703 | 323 | ArgK Putative periplasmic protein kinase ArgK and | 82.72 | |
| COG0052 | 252 | RpsB Ribosomal protein S2 [Translation, ribosomal | 82.38 | |
| PRK05647 | 200 | purN phosphoribosylglycinamide formyltransferase; | 82.23 | |
| COG3660 | 329 | Predicted nucleoside-diphosphate-sugar epimerase [ | 82.15 | |
| PF02374 | 305 | ArsA_ATPase: Anion-transporting ATPase; PDB: 2WOO_ | 81.07 | |
| cd02067 | 119 | B12-binding B12 binding domain (B12-BD). This doma | 81.04 | |
| cd00532 | 112 | MGS-like MGS-like domain. This domain composes the | 81.01 | |
| PRK06718 | 202 | precorrin-2 dehydrogenase; Reviewed | 80.31 | |
| PF02441 | 129 | Flavoprotein: Flavoprotein; InterPro: IPR003382 Th | 80.17 |
| >PLN02863 UDP-glucoronosyl/UDP-glucosyl transferase family protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-67 Score=521.17 Aligned_cols=450 Identities=56% Similarity=1.022 Sum_probs=349.6
Q ss_pred ccEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCCCChhhhhhhccCCCCCCeeEEEcCCCCCCCCCCh--------
Q 042753 5 GAHILVYPFPTSGHIIPLLDLTNRLLTLGLNVTVLITQNNLPLLDSLNANHPSTSLQSLVLPQPKWPAGSPA-------- 76 (473)
Q Consensus 5 ~~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~i~~~~~~~~~~~~~f~~l~~~~~~~~~~~-------- 76 (473)
..||+++|+|++||++||+.||+.|+.+|+.|||++++.+..++...... .+++++..+|++..+++++.
T Consensus 9 ~~HVvl~PfpaqGHi~P~l~LAk~La~~G~~VTfv~T~~n~~~~~~~~~~--~~~i~~~~lp~P~~~~lPdG~~~~~~~~ 86 (477)
T PLN02863 9 GTHVLVFPFPAQGHMIPLLDLTHRLALRGLTITVLVTPKNLPFLNPLLSK--HPSIETLVLPFPSHPSIPSGVENVKDLP 86 (477)
T ss_pred CCEEEEecCcccchHHHHHHHHHHHHhCCCEEEEEeCCCcHHHHhhhccc--CCCeeEEeCCCCCcCCCCCCCcChhhcc
Confidence 58999999999999999999999999999999999999988777654221 13588888887654455422
Q ss_pred -hhHHHHHHHHHHHhhHHHHHHHhcCCCCCcEEEeCCCcchHHHHHHHhCCCcEEEecchHHHHHHHHhhhccCCCCCCC
Q 042753 77 -TRLLKFMRVLRELHYPALLDWFKSHPSPPVAILSDFFLGWTQGLAAELGLPRVVFSPSGAFALSVSFAMWTDLPTNDDP 155 (473)
Q Consensus 77 -~~~~~~~~~~~~~~~~~l~~~l~~~~~~pD~VV~D~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~p~~~~~ 155 (473)
..+..+...+. ...+.+.+++++.+.+|+|||+|.+.+|+..+|+++|||++.|++++++.++.+.+.+...|.....
T Consensus 87 ~~~~~~~~~a~~-~~~~~~~~~l~~~~~~p~cvI~D~f~~Wa~dVA~e~GIP~~~F~t~sA~~~~~~~~~~~~~~~~~~~ 165 (477)
T PLN02863 87 PSGFPLMIHALG-ELYAPLLSWFRSHPSPPVAIISDMFLGWTQNLACQLGIRRFVFSPSGAMALSIMYSLWREMPTKINP 165 (477)
T ss_pred hhhHHHHHHHHH-HhHHHHHHHHHhCCCCCeEEEEcCchHhHHHHHHHcCCCEEEEeccCHHHHHHHHHHhhcccccccc
Confidence 11223444444 5567777777764336799999999999999999999999999999999999888776544331001
Q ss_pred CCCCcc---ccCCCCCCCCCCCccccchhhhccCCCCCchHHHHHHhhhccCCcEEeecchHHhhHHHHHHHHHhhCCCc
Q 042753 156 DNVDAL---VSFPRVPNCPVYPWYQISHLYRTLKEGDPDWDLHRSNMMANKTSWGIVFNSFAELERVYIDHMKKEMGHDR 232 (473)
Q Consensus 156 ~~~~~~---~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~le~~~~~~~~~~~~~~~ 232 (473)
...... ..+|+++. +..++++.++..........+.+.+.......+.++++|||++||+.+++.+...++.++
T Consensus 166 ~~~~~~~~~~~iPg~~~---~~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~~~~vlvNTf~eLE~~~~~~~~~~~~~~~ 242 (477)
T PLN02863 166 DDQNEILSFSKIPNCPK---YPWWQISSLYRSYVEGDPAWEFIKDSFRANIASWGLVVNSFTELEGIYLEHLKKELGHDR 242 (477)
T ss_pred cccccccccCCCCCCCC---cChHhCchhhhccCccchHHHHHHHHHhhhccCCEEEEecHHHHHHHHHHHHHhhcCCCC
Confidence 111111 23566654 777777776653322222344444444555677899999999999999999987652147
Q ss_pred EEEeccCCCCCCcchh-hccCCCCCCCChhhhHHHhcCCCCCcEEEEEeCCcccCCHHHHHHHHHHHHhCCCcEEEEEeC
Q 042753 233 VWAVGPVLPPDDDLVE-SMCRGGSSSVPAHDVLTWLDSRRDESVVYVCFGSRYVLTAKQIHELAAALEKTDVDFVYCVRE 311 (473)
Q Consensus 233 ~~~vGpl~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~~~~V~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~ 311 (473)
++.|||+.... .... ...++......++++.+|++.++++++|||||||....+.+++.+++.+|++++++|||+++.
T Consensus 243 v~~IGPL~~~~-~~~~~~~~~~~~~~~~~~~~~~WLd~~~~~svVyvsfGS~~~~~~~~~~ela~gL~~~~~~flw~~~~ 321 (477)
T PLN02863 243 VWAVGPILPLS-GEKSGLMERGGPSSVSVDDVMTWLDTCEDHKVVYVCFGSQVVLTKEQMEALASGLEKSGVHFIWCVKE 321 (477)
T ss_pred eEEeCCCcccc-cccccccccCCcccccHHHHHHHHhcCCCCceEEEEeeceecCCHHHHHHHHHHHHhCCCcEEEEECC
Confidence 99999997543 1000 001111111234689999999888999999999999999999999999999999999999985
Q ss_pred CCccCCcccCCCCchhhHHhhcCCCeEeecCccHHHhhhccCccceeeccCchhHHHHHhhCCeEecCcccccchhhHHH
Q 042753 312 PDERHASQDCGVLPDGFEDRVAGRGYVIRGWSQQVAILRHKAVGAFLTHCGWNSVLEGVSAGVVMLTWPMDADQYTNAQL 391 (473)
Q Consensus 312 ~~~~~~~~~~~~lp~~~~~~~~~~nv~v~~~~pq~~lL~~~~v~~~ItHgG~~s~~eal~~GvP~l~~P~~~DQ~~na~r 391 (473)
+. + .......+|++|.++...+|+++.+|+||.+||+|+++++|||||||||++||+++|||||++|+++||+.||++
T Consensus 322 ~~-~-~~~~~~~lp~~~~~r~~~~g~~v~~w~PQ~~vL~h~~v~~fvtH~G~nS~~Eal~~GvP~l~~P~~~DQ~~na~~ 399 (477)
T PLN02863 322 PV-N-EESDYSNIPSGFEDRVAGRGLVIRGWAPQVAILSHRAVGAFLTHCGWNSVLEGLVAGVPMLAWPMAADQFVNASL 399 (477)
T ss_pred Cc-c-cccchhhCCHHHHHHhccCCEEecCCCCHHHHhcCCCcCeEEecCCchHHHHHHHcCCCEEeCCccccchhhHHH
Confidence 42 0 000113589999999989999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhcceEEeccCCCCCCCHHHHHHHHHHHh-CCcHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHhh
Q 042753 392 LVDQLGVGIRVGEGTRNIPESDELARLLAQSV-DGPRRERLKARELSGAALSAVVKGGSSDRDLNDFIKRINEL 464 (473)
Q Consensus 392 v~~~~G~G~~l~~~~~~~~~~~~l~~~i~~~l-~~~~~~~~~a~~~~~~~~~~~~~~gs~~~~~~~~~~~~~~~ 464 (473)
+++.||+|+++.+++....+.+++.++|+++| +++ +||+||+++++..++++.+||||++++++|++++++.
T Consensus 400 v~~~~gvG~~~~~~~~~~~~~~~v~~~v~~~m~~~~-~~r~~a~~l~e~a~~Av~~gGSS~~~l~~~v~~i~~~ 472 (477)
T PLN02863 400 LVDELKVAVRVCEGADTVPDSDELARVFMESVSENQ-VERERAKELRRAALDAIKERGSSVKDLDGFVKHVVEL 472 (477)
T ss_pred HHHhhceeEEeccCCCCCcCHHHHHHHHHHHhhccH-HHHHHHHHHHHHHHHHhccCCcHHHHHHHHHHHHHHh
Confidence 88788999999632224568999999999999 564 9999999999999999999999999999999999875
|
|
| >PLN02992 coniferyl-alcohol glucosyltransferase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-66 Score=513.75 Aligned_cols=438 Identities=29% Similarity=0.472 Sum_probs=342.1
Q ss_pred CCccEEEEEcCCCCCChHHHHHHHHHHH-hCCCeEEEEeCCCChhhhhhhccCCCCCCeeEEEcCCCCCCCCC-Chh-hH
Q 042753 3 PAGAHILVYPFPTSGHIIPLLDLTNRLL-TLGLNVTVLITQNNLPLLDSLNANHPSTSLQSLVLPQPKWPAGS-PAT-RL 79 (473)
Q Consensus 3 ~~~~~Il~~~~~~~GH~~p~l~La~~L~-~rGh~Vt~~~~~~~~~~i~~~~~~~~~~~~~f~~l~~~~~~~~~-~~~-~~ 79 (473)
..-.||+++|+|++||++|++.||+.|+ ++|++|||++++.+..++.+.... .+++++..+|++..++++ +.. ..
T Consensus 3 ~~~pHVvl~P~paqGHi~P~l~LAk~La~~~g~~vT~v~t~~n~~~~~~~~~~--~~~i~~~~lp~p~~~glp~~~~~~~ 80 (481)
T PLN02992 3 ITKPHAAMFSSPGMGHVIPVIELGKRLSANHGFHVTVFVLETDAASAQSKFLN--STGVDIVGLPSPDISGLVDPSAHVV 80 (481)
T ss_pred CCCcEEEEeCCcccchHHHHHHHHHHHHhCCCcEEEEEeCCCchhhhhhcccc--CCCceEEECCCccccCCCCCCccHH
Confidence 3457999999999999999999999998 789999999999886655333111 125899999977655665 222 11
Q ss_pred HHHHHHHHHHhhHHHHHHHhcCCCCCcEEEeCCCcchHHHHHHHhCCCcEEEecchHHHHHHHHhhhcc-CCCCCCC-CC
Q 042753 80 LKFMRVLRELHYPALLDWFKSHPSPPVAILSDFFLGWTQGLAAELGLPRVVFSPSGAFALSVSFAMWTD-LPTNDDP-DN 157 (473)
Q Consensus 80 ~~~~~~~~~~~~~~l~~~l~~~~~~pD~VV~D~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~-~p~~~~~-~~ 157 (473)
..+...+. ...+.+++++++...+|+|||+|.+++|+..+|+++|||++.|++++++.++.+.+.... .+. ... ..
T Consensus 81 ~~~~~~~~-~~~~~~~~~l~~~~~~p~cvV~D~f~~Wa~dVA~elgIP~v~F~t~sA~~~~~~~~~~~~~~~~-~~~~~~ 158 (481)
T PLN02992 81 TKIGVIMR-EAVPTLRSKIAEMHQKPTALIVDLFGTDALCLGGEFNMLTYIFIASNARFLGVSIYYPTLDKDI-KEEHTV 158 (481)
T ss_pred HHHHHHHH-HhHHHHHHHHHhcCCCCeEEEECCcchhHHHHHHHcCCCEEEEecCcHHHHHHHHhhhhhcccc-cccccc
Confidence 22222233 556778888876422789999999999999999999999999999999887665544321 111 000 00
Q ss_pred CCccccCCCCCCCCCCCccccchhhhccCCCCCchHHHHHHhhhccCCcEEeecchHHhhHHHHHHHHHh------hCCC
Q 042753 158 VDALVSFPRVPNCPVYPWYQISHLYRTLKEGDPDWDLHRSNMMANKTSWGIVFNSFAELERVYIDHMKKE------MGHD 231 (473)
Q Consensus 158 ~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~le~~~~~~~~~~------~~~~ 231 (473)
...+..+|+++. +...+++..+... .......+.+......+++++++|||++||+.+++.+... .. +
T Consensus 159 ~~~~~~iPg~~~---l~~~dlp~~~~~~--~~~~~~~~~~~~~~~~~a~gvlvNTf~eLE~~~l~~l~~~~~~~~~~~-~ 232 (481)
T PLN02992 159 QRKPLAMPGCEP---VRFEDTLDAYLVP--DEPVYRDFVRHGLAYPKADGILVNTWEEMEPKSLKSLQDPKLLGRVAR-V 232 (481)
T ss_pred CCCCcccCCCCc---cCHHHhhHhhcCC--CcHHHHHHHHHHHhcccCCEEEEechHHHhHHHHHHHhhccccccccC-C
Confidence 112345777764 5666666533221 2223445556666777899999999999999999988642 12 4
Q ss_pred cEEEeccCCCCCCcchhhccCCCCCCCChhhhHHHhcCCCCCcEEEEEeCCcccCCHHHHHHHHHHHHhCCCcEEEEEeC
Q 042753 232 RVWAVGPVLPPDDDLVESMCRGGSSSVPAHDVLTWLDSRRDESVVYVCFGSRYVLTAKQIHELAAALEKTDVDFVYCVRE 311 (473)
Q Consensus 232 ~~~~vGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~V~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~ 311 (473)
+++.|||+...... ...++++.+|||.++.+++|||||||....+.+++++++.+|+.++++|||+++.
T Consensus 233 ~v~~VGPl~~~~~~-----------~~~~~~c~~wLd~~~~~sVvyvsfGS~~~l~~~q~~ela~gL~~s~~~flW~~r~ 301 (481)
T PLN02992 233 PVYPIGPLCRPIQS-----------SKTDHPVLDWLNKQPNESVLYISFGSGGSLSAKQLTELAWGLEMSQQRFVWVVRP 301 (481)
T ss_pred ceEEecCccCCcCC-----------CcchHHHHHHHHcCCCCceEEEeecccccCCHHHHHHHHHHHHHcCCCEEEEEeC
Confidence 69999999764301 2244679999999888999999999999999999999999999999999999974
Q ss_pred CCccC-----C-------cc-cCCCCchhhHHhhcCCCeEeecCccHHHhhhccCccceeeccCchhHHHHHhhCCeEec
Q 042753 312 PDERH-----A-------SQ-DCGVLPDGFEDRVAGRGYVIRGWSQQVAILRHKAVGAFLTHCGWNSVLEGVSAGVVMLT 378 (473)
Q Consensus 312 ~~~~~-----~-------~~-~~~~lp~~~~~~~~~~nv~v~~~~pq~~lL~~~~v~~~ItHgG~~s~~eal~~GvP~l~ 378 (473)
+.... + .+ ..+.+|++|.+++..+|+++.+|+||.+||+|+++++|||||||||++||+++|||||+
T Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~~~lp~~f~eR~~~rg~vv~~W~PQ~~iL~h~~vg~FitH~G~nS~~Eal~~GVP~l~ 381 (481)
T PLN02992 302 PVDGSACSAYFSANGGETRDNTPEYLPEGFVSRTHDRGFVVPSWAPQAEILAHQAVGGFLTHCGWSSTLESVVGGVPMIA 381 (481)
T ss_pred CcccccccccccCcccccccchhhhCCHHHHHHhcCCCEEEeecCCHHHHhCCcccCeeEecCchhHHHHHHHcCCCEEe
Confidence 21000 0 00 02358999999999999999999999999999999999999999999999999999999
Q ss_pred CcccccchhhHHHHHHHhcceEEeccCCC--CCCCHHHHHHHHHHHhCCc--HHHHHHHHHHHHHHHHHHh--cCCChHH
Q 042753 379 WPMDADQYTNAQLLVDQLGVGIRVGEGTR--NIPESDELARLLAQSVDGP--RRERLKARELSGAALSAVV--KGGSSDR 452 (473)
Q Consensus 379 ~P~~~DQ~~na~rv~~~~G~G~~l~~~~~--~~~~~~~l~~~i~~~l~~~--~~~~~~a~~~~~~~~~~~~--~~gs~~~ 452 (473)
+|+++||+.||+++++++|+|+.++ . ..++.++|.++|+++|.++ +.++++|+++++..++++. +||||++
T Consensus 382 ~P~~~DQ~~na~~~~~~~g~gv~~~---~~~~~~~~~~l~~av~~vm~~~~g~~~r~~a~~~~~~a~~Av~~~~GGSS~~ 458 (481)
T PLN02992 382 WPLFAEQNMNAALLSDELGIAVRSD---DPKEVISRSKIEALVRKVMVEEEGEEMRRKVKKLRDTAEMSLSIDGGGVAHE 458 (481)
T ss_pred cCccchhHHHHHHHHHHhCeeEEec---CCCCcccHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHhcCCCCCchHH
Confidence 9999999999999976789999997 4 4689999999999999864 5899999999999999984 5999999
Q ss_pred HHHHHHHHHHhh
Q 042753 453 DLNDFIKRINEL 464 (473)
Q Consensus 453 ~~~~~~~~~~~~ 464 (473)
++++|++++++-
T Consensus 459 ~l~~~v~~~~~~ 470 (481)
T PLN02992 459 SLCRVTKECQRF 470 (481)
T ss_pred HHHHHHHHHHHH
Confidence 999999998874
|
|
| >PLN02534 UDP-glycosyltransferase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-66 Score=513.23 Aligned_cols=455 Identities=31% Similarity=0.538 Sum_probs=346.3
Q ss_pred ccEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCCCChhhhhhhccC--CCCCCeeEEEcCCCCC-CCCCCh-----
Q 042753 5 GAHILVYPFPTSGHIIPLLDLTNRLLTLGLNVTVLITQNNLPLLDSLNAN--HPSTSLQSLVLPQPKW-PAGSPA----- 76 (473)
Q Consensus 5 ~~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~i~~~~~~--~~~~~~~f~~l~~~~~-~~~~~~----- 76 (473)
..||+++|+|++||++|++.||+.|+.||+.|||++++.+...+...... .....++|..+|+|.. +++|+.
T Consensus 8 ~~Hvv~vPfpaqGHi~P~l~LAk~La~~G~~vT~v~t~~n~~~~~~~~~~~~~~~~~i~~~~lp~p~~~dglp~~~~~~~ 87 (491)
T PLN02534 8 QLHFVLIPLMAQGHMIPMIDMARLLAERGVIVSLVTTPQNASRFAKTIDRARESGLPIRLVQIPFPCKEVGLPIGCENLD 87 (491)
T ss_pred CCEEEEECCCCcchHHHHHHHHHHHHhCCCeEEEEECCCcHHHHhhhhhhccccCCCeEEEEcCCCCccCCCCCCccccc
Confidence 36999999999999999999999999999999999999887666554321 1112489999987642 455532
Q ss_pred -----hhHHHHHHHHHHHhhHHHHHHHhcCCCCCcEEEeCCCcchHHHHHHHhCCCcEEEecchHHHHHHHHhhhccCCC
Q 042753 77 -----TRLLKFMRVLRELHYPALLDWFKSHPSPPVAILSDFFLGWTQGLAAELGLPRVVFSPSGAFALSVSFAMWTDLPT 151 (473)
Q Consensus 77 -----~~~~~~~~~~~~~~~~~l~~~l~~~~~~pD~VV~D~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~p~ 151 (473)
..+..+...+. .+.+.+.++|++...+++|||+|.+++|+..+|+++|||.+.|++++++....+++.+...+.
T Consensus 88 ~~~~~~~~~~~~~~~~-~l~~~l~~lL~~~~~pp~cIV~D~f~~Wa~dVA~~lgIP~v~F~t~~a~~~~~~~~~~~~~~~ 166 (491)
T PLN02534 88 TLPSRDLLRKFYDAVD-KLQQPLERFLEQAKPPPSCIISDKCLSWTSKTAQRFNIPRIVFHGMCCFSLLSSHNIRLHNAH 166 (491)
T ss_pred cCCcHHHHHHHHHHHH-HhHHHHHHHHHhcCCCCcEEEECCccHHHHHHHHHhCCCeEEEecchHHHHHHHHHHHHhccc
Confidence 11223333333 566788888886433689999999999999999999999999999999887765544333322
Q ss_pred CCCCCCCCccccCCCCCCCCCCCccccchhhhccCCCCCchHHHHHHhhhccCCcEEeecchHHhhHHHHHHHHHhhCCC
Q 042753 152 NDDPDNVDALVSFPRVPNCPVYPWYQISHLYRTLKEGDPDWDLHRSNMMANKTSWGIVFNSFAELERVYIDHMKKEMGHD 231 (473)
Q Consensus 152 ~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~le~~~~~~~~~~~~~~ 231 (473)
....++..+..+|+++....+...+++.++... .....+..........++++++|||++||+.+++.+...++ +
T Consensus 167 -~~~~~~~~~~~iPg~p~~~~l~~~dlp~~~~~~---~~~~~~~~~~~~~~~~a~~vlvNTf~eLE~~~l~~l~~~~~-~ 241 (491)
T PLN02534 167 -LSVSSDSEPFVVPGMPQSIEITRAQLPGAFVSL---PDLDDVRNKMREAESTAFGVVVNSFNELEHGCAEAYEKAIK-K 241 (491)
T ss_pred -ccCCCCCceeecCCCCccccccHHHCChhhcCc---ccHHHHHHHHHhhcccCCEEEEecHHHhhHHHHHHHHhhcC-C
Confidence 111122345568888765556777777654321 11222322232233457799999999999999999987776 6
Q ss_pred cEEEeccCCCCCCcchhhccCCCCCCCChhhhHHHhcCCCCCcEEEEEeCCcccCCHHHHHHHHHHHHhCCCcEEEEEeC
Q 042753 232 RVWAVGPVLPPDDDLVESMCRGGSSSVPAHDVLTWLDSRRDESVVYVCFGSRYVLTAKQIHELAAALEKTDVDFVYCVRE 311 (473)
Q Consensus 232 ~~~~vGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~V~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~ 311 (473)
+++.|||+........+...++.......++|.+|||.+..+++|||||||......+++.+++.+|+.++++|||+++.
T Consensus 242 ~v~~VGPL~~~~~~~~~~~~~~~~~~~~~~~cl~wLd~~~~~sVvyvsfGS~~~~~~~q~~e~a~gl~~~~~~flW~~r~ 321 (491)
T PLN02534 242 KVWCVGPVSLCNKRNLDKFERGNKASIDETQCLEWLDSMKPRSVIYACLGSLCRLVPSQLIELGLGLEASKKPFIWVIKT 321 (491)
T ss_pred cEEEECcccccccccccccccCCccccchHHHHHHHhcCCCCceEEEEecccccCCHHHHHHHHHHHHhCCCCEEEEEec
Confidence 89999999753201000011111101124579999999888999999999999999999999999999999999999985
Q ss_pred CCccCCcccCCCCchhhHHhhcCCCeEeecCccHHHhhhccCccceeeccCchhHHHHHhhCCeEecCcccccchhhHHH
Q 042753 312 PDERHASQDCGVLPDGFEDRVAGRGYVIRGWSQQVAILRHKAVGAFLTHCGWNSVLEGVSAGVVMLTWPMDADQYTNAQL 391 (473)
Q Consensus 312 ~~~~~~~~~~~~lp~~~~~~~~~~nv~v~~~~pq~~lL~~~~v~~~ItHgG~~s~~eal~~GvP~l~~P~~~DQ~~na~r 391 (473)
+.... +.+...+|++|.++..++|+++.+|+||.+||+|++++||||||||||++||+++|||||++|++.||+.||++
T Consensus 322 ~~~~~-~~~~~~~p~gf~~~~~~~g~~v~~w~pq~~iL~h~~v~~fvtH~G~ns~~ea~~~GvP~v~~P~~~dq~~na~~ 400 (491)
T PLN02534 322 GEKHS-ELEEWLVKENFEERIKGRGLLIKGWAPQVLILSHPAIGGFLTHCGWNSTIEGICSGVPMITWPLFAEQFLNEKL 400 (491)
T ss_pred Ccccc-chhhhcCchhhHHhhccCCeeccCCCCHHHHhcCCccceEEecCccHHHHHHHHcCCCEEeccccccHHHHHHH
Confidence 31000 00011368999988888899999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhcceEEecc------CCC---C-CCCHHHHHHHHHHHhC--C-c-HHHHHHHHHHHHHHHHHHhcCCChHHHHHHH
Q 042753 392 LVDQLGVGIRVGE------GTR---N-IPESDELARLLAQSVD--G-P-RRERLKARELSGAALSAVVKGGSSDRDLNDF 457 (473)
Q Consensus 392 v~~~~G~G~~l~~------~~~---~-~~~~~~l~~~i~~~l~--~-~-~~~~~~a~~~~~~~~~~~~~~gs~~~~~~~~ 457 (473)
+++.||+|+++.- ++. + ..++++|+++|+++|. + + +++|+||++|++..++++.+||||++++++|
T Consensus 401 ~~e~~~vGv~~~~~~~~~~~~~~~~~~~v~~eev~~~v~~~m~~~~eeg~~~R~rA~elk~~a~~Av~~GGSS~~nl~~f 480 (491)
T PLN02534 401 IVEVLRIGVRVGVEVPVRWGDEERVGVLVKKDEVEKAVKTLMDDGGEEGERRRRRAQELGVMARKAMELGGSSHINLSIL 480 (491)
T ss_pred HHHhhcceEEecccccccccccccccCccCHHHHHHHHHHHhccccccHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHH
Confidence 9999999998841 001 1 3899999999999996 2 2 6899999999999999999999999999999
Q ss_pred HHHHHhhcc
Q 042753 458 IKRINELKS 466 (473)
Q Consensus 458 ~~~~~~~~~ 466 (473)
++.+++..+
T Consensus 481 v~~i~~~~~ 489 (491)
T PLN02534 481 IQDVLKQQS 489 (491)
T ss_pred HHHHHHHhc
Confidence 999987543
|
|
| >PLN03007 UDP-glucosyltransferase family protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=6e-66 Score=517.53 Aligned_cols=453 Identities=32% Similarity=0.590 Sum_probs=342.5
Q ss_pred CCCCccEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCCCChhhhhhhccCC--CCC--CeeEEEcCCCCC-CCCCC
Q 042753 1 MLPAGAHILVYPFPTSGHIIPLLDLTNRLLTLGLNVTVLITQNNLPLLDSLNANH--PST--SLQSLVLPQPKW-PAGSP 75 (473)
Q Consensus 1 ~~~~~~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~i~~~~~~~--~~~--~~~f~~l~~~~~-~~~~~ 75 (473)
|+..+.||+++|+|++||++|++.||++|+.|||+|||++++.+..++++.+... ..+ .+++..++++.. +++++
T Consensus 1 ~~~~~~hVvlvp~pa~GHi~P~L~LAk~L~~rG~~VT~vtt~~~~~~i~~~~a~~~~~~~~~~~~~~~~~~p~~~~glP~ 80 (482)
T PLN03007 1 MNHEKLHILFFPFMAHGHMIPTLDMAKLFSSRGAKSTILTTPLNAKIFEKPIEAFKNLNPGLEIDIQIFNFPCVELGLPE 80 (482)
T ss_pred CCCCCcEEEEECCCccccHHHHHHHHHHHHhCCCEEEEEECCCchhhhhhhhhhhcccCCCCcceEEEeeCCCCcCCCCC
Confidence 6667889999999999999999999999999999999999999887766543210 011 134444444421 23331
Q ss_pred h----------------hhHHHHHHHHHHHhhHHHHHHHhcCCCCCcEEEeCCCcchHHHHHHHhCCCcEEEecchHHHH
Q 042753 76 A----------------TRLLKFMRVLRELHYPALLDWFKSHPSPPVAILSDFFLGWTQGLAAELGLPRVVFSPSGAFAL 139 (473)
Q Consensus 76 ~----------------~~~~~~~~~~~~~~~~~l~~~l~~~~~~pD~VV~D~~~~~~~~~A~~~giP~v~~~~~~~~~~ 139 (473)
. ..+..+..... .+.+.+.+++++. +|||||+|.+++|+..+|+++|||.+.|++++++..
T Consensus 81 g~e~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~l~~~l~~~--~~~~IV~D~~~~w~~~vA~~lgIP~v~f~~~~a~~~ 157 (482)
T PLN03007 81 GCENVDFITSNNNDDSGDLFLKFLFSTK-YFKDQLEKLLETT--RPDCLVADMFFPWATEAAEKFGVPRLVFHGTGYFSL 157 (482)
T ss_pred CcccccccccccccchHHHHHHHHHHHH-HHHHHHHHHHhcC--CCCEEEECCcchhHHHHHHHhCCCeEEeecccHHHH
Confidence 1 11222333333 6677888888877 899999999999999999999999999999999877
Q ss_pred HHHHhhhccCCCCCCCCCCCccccCCCCCCCCCCCccccchhhhccCCCCCchHHHHHHhhhccCCcEEeecchHHhhHH
Q 042753 140 SVSFAMWTDLPTNDDPDNVDALVSFPRVPNCPVYPWYQISHLYRTLKEGDPDWDLHRSNMMANKTSWGIVFNSFAELERV 219 (473)
Q Consensus 140 ~~~~~~~~~~p~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~le~~ 219 (473)
..+++.....|. ........+..+|+++..+.+...+++.. .......+++........+.+++++|||+++|+.
T Consensus 158 ~~~~~~~~~~~~-~~~~~~~~~~~~pg~p~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~vl~Nt~~~le~~ 232 (482)
T PLN03007 158 CASYCIRVHKPQ-KKVASSSEPFVIPDLPGDIVITEEQINDA----DEESPMGKFMKEVRESEVKSFGVLVNSFYELESA 232 (482)
T ss_pred HHHHHHHhcccc-cccCCCCceeeCCCCCCccccCHHhcCCC----CCchhHHHHHHHHHhhcccCCEEEEECHHHHHHH
Confidence 766544433332 11111112334777764344444444421 1112233445555566778889999999999999
Q ss_pred HHHHHHHhhCCCcEEEeccCCCCCCcchhhccCCCCCCCChhhhHHHhcCCCCCcEEEEEeCCcccCCHHHHHHHHHHHH
Q 042753 220 YIDHMKKEMGHDRVWAVGPVLPPDDDLVESMCRGGSSSVPAHDVLTWLDSRRDESVVYVCFGSRYVLTAKQIHELAAALE 299 (473)
Q Consensus 220 ~~~~~~~~~~~~~~~~vGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~V~vs~Gs~~~~~~~~~~~~~~al~ 299 (473)
+.+.+.+... +.+++|||+........+...++...+..++++.+|++.++.+++|||||||....+.+++.+++.+|+
T Consensus 233 ~~~~~~~~~~-~~~~~VGPl~~~~~~~~~~~~~~~~~~~~~~~~~~wLd~~~~~svvyvsfGS~~~~~~~~~~~~~~~l~ 311 (482)
T PLN03007 233 YADFYKSFVA-KRAWHIGPLSLYNRGFEEKAERGKKANIDEQECLKWLDSKKPDSVIYLSFGSVASFKNEQLFEIAAGLE 311 (482)
T ss_pred HHHHHHhccC-CCEEEEccccccccccccccccCCccccchhHHHHHHhcCCCCceEEEeecCCcCCCHHHHHHHHHHHH
Confidence 8888877655 579999998653301000000111112235789999999878999999999999888999999999999
Q ss_pred hCCCcEEEEEeCCCccCCcccCCCCchhhHHhhcCCCeEeecCccHHHhhhccCccceeeccCchhHHHHHhhCCeEecC
Q 042753 300 KTDVDFVYCVREPDERHASQDCGVLPDGFEDRVAGRGYVIRGWSQQVAILRHKAVGAFLTHCGWNSVLEGVSAGVVMLTW 379 (473)
Q Consensus 300 ~~~~~~i~~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~v~~~~pq~~lL~~~~v~~~ItHgG~~s~~eal~~GvP~l~~ 379 (473)
.++++|||+++.+... ....+.+|++|.++..++|+++.+|+||.+||+|+++++|||||||||++||+++|||||++
T Consensus 312 ~~~~~flw~~~~~~~~--~~~~~~lp~~~~~r~~~~g~~v~~w~PQ~~iL~h~~v~~fvtH~G~nS~~Eal~~GVP~v~~ 389 (482)
T PLN03007 312 GSGQNFIWVVRKNENQ--GEKEEWLPEGFEERTKGKGLIIRGWAPQVLILDHQATGGFVTHCGWNSLLEGVAAGLPMVTW 389 (482)
T ss_pred HCCCCEEEEEecCCcc--cchhhcCCHHHHHHhccCCEEEecCCCHHHHhccCccceeeecCcchHHHHHHHcCCCeeec
Confidence 9999999999974200 01123589999999999999999999999999999999999999999999999999999999
Q ss_pred cccccchhhHHHHHHHhcceEEeccC-----CCCCCCHHHHHHHHHHHhCCc--HHHHHHHHHHHHHHHHHHhcCCChHH
Q 042753 380 PMDADQYTNAQLLVDQLGVGIRVGEG-----TRNIPESDELARLLAQSVDGP--RRERLKARELSGAALSAVVKGGSSDR 452 (473)
Q Consensus 380 P~~~DQ~~na~rv~~~~G~G~~l~~~-----~~~~~~~~~l~~~i~~~l~~~--~~~~~~a~~~~~~~~~~~~~~gs~~~ 452 (473)
|+++||+.||+++++.+++|+.+..+ +...+++++|.++|+++|.++ ++||++|+++++.+++++.+||||++
T Consensus 390 P~~~DQ~~na~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~l~~av~~~m~~~~~~~~r~~a~~~~~~a~~a~~~gGsS~~ 469 (482)
T PLN03007 390 PVGAEQFYNEKLVTQVLRTGVSVGAKKLVKVKGDFISREKVEKAVREVIVGEEAEERRLRAKKLAEMAKAAVEEGGSSFN 469 (482)
T ss_pred cchhhhhhhHHHHHHhhcceeEeccccccccccCcccHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHhCCCcHHH
Confidence 99999999999998777777776310 145689999999999999874 48999999999999999999999999
Q ss_pred HHHHHHHHHHhh
Q 042753 453 DLNDFIKRINEL 464 (473)
Q Consensus 453 ~~~~~~~~~~~~ 464 (473)
++++|++.+++.
T Consensus 470 ~l~~~v~~~~~~ 481 (482)
T PLN03007 470 DLNKFMEELNSR 481 (482)
T ss_pred HHHHHHHHHHhc
Confidence 999999998864
|
|
| >PLN02670 transferase, transferring glycosyl groups | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-65 Score=504.14 Aligned_cols=450 Identities=27% Similarity=0.425 Sum_probs=340.7
Q ss_pred CCCC-ccEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCCCChhhhhhhccCCCCCCeeEEEcCCCCCCCCCCh---
Q 042753 1 MLPA-GAHILVYPFPTSGHIIPLLDLTNRLLTLGLNVTVLITQNNLPLLDSLNANHPSTSLQSLVLPQPKWPAGSPA--- 76 (473)
Q Consensus 1 ~~~~-~~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~i~~~~~~~~~~~~~f~~l~~~~~~~~~~~--- 76 (473)
|+.+ ..||+++|+|++||++|++.||+.|+.||+.|||++++.+...+..... ...+++++..+|++..+++++.
T Consensus 1 ~~~~~~~HVvl~P~paqGHi~P~l~LAk~La~~G~~vT~v~t~~n~~~~~~~~~-~~~~~i~~~~lp~p~~dglp~~~~~ 79 (472)
T PLN02670 1 MKREEVLHVAMFPWLAMGHLIPFLRLSKLLAQKGHKISFISTPRNLHRLPKIPS-QLSSSITLVSFPLPSVPGLPSSAES 79 (472)
T ss_pred CCCCCCcEEEEeCChhhhHHHHHHHHHHHHHhCCCEEEEEeCCchHHhhhhccc-cCCCCeeEEECCCCccCCCCCCccc
Confidence 4444 4699999999999999999999999999999999999988766653211 1123589999997765566632
Q ss_pred -hhH----HHHHHHHHHHhhHHHHHHHhcCCCCCcEEEeCCCcchHHHHHHHhCCCcEEEecchHHHHHHHHhhhccCCC
Q 042753 77 -TRL----LKFMRVLRELHYPALLDWFKSHPSPPVAILSDFFLGWTQGLAAELGLPRVVFSPSGAFALSVSFAMWTDLPT 151 (473)
Q Consensus 77 -~~~----~~~~~~~~~~~~~~l~~~l~~~~~~pD~VV~D~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~p~ 151 (473)
..+ ..++....+.+.+.+.+++++. +++|||+|.+++|+..+|+++|||++.|++++++.+..+.+.......
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~cvI~D~f~~wa~~vA~~~gIP~~~f~~~~a~~~~~~~~~~~~~~~ 157 (472)
T PLN02670 80 STDVPYTKQQLLKKAFDLLEPPLTTFLETS--KPDWIIYDYASHWLPSIAAELGISKAFFSLFTAATLSFIGPPSSLMEG 157 (472)
T ss_pred ccccchhhHHHHHHHHHHhHHHHHHHHHhC--CCcEEEECCcchhHHHHHHHcCCCEEEEehhhHHHHHHHhhhHhhhhc
Confidence 111 1122233336778889999888 899999999999999999999999999999999877775533211000
Q ss_pred CCCCCCCCccc-cCCCC-C--CCCCCCccccchhhhccCCCCCchHHHHHHhhhccCCcEEeecchHHhhHHHHHHHHHh
Q 042753 152 NDDPDNVDALV-SFPRV-P--NCPVYPWYQISHLYRTLKEGDPDWDLHRSNMMANKTSWGIVFNSFAELERVYIDHMKKE 227 (473)
Q Consensus 152 ~~~~~~~~~~~-~~p~l-~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~le~~~~~~~~~~ 227 (473)
.......... .+|+. | ..+.+..++++.++............+.+......++.++++|||++||+.+++.+...
T Consensus 158 -~~~~~~~~~~~~~p~~~P~~~~~~~~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~~~gvlvNTf~eLE~~~l~~l~~~ 236 (472)
T PLN02670 158 -GDLRSTAEDFTVVPPWVPFESNIVFRYHEVTKYVEKTEEDETGPSDSVRFGFAIGGSDVVIIRSSPEFEPEWFDLLSDL 236 (472)
T ss_pred -ccCCCccccccCCCCcCCCCccccccHHHhhHHHhccCccchHHHHHHHHHhhcccCCEEEEeCHHHHhHHHHHHHHHh
Confidence 0110111111 23432 2 11235556777766432222222333445555667789999999999999999999876
Q ss_pred hCCCcEEEeccCCCCCCcchhhccCCCCCCCChhhhHHHhcCCCCCcEEEEEeCCcccCCHHHHHHHHHHHHhCCCcEEE
Q 042753 228 MGHDRVWAVGPVLPPDDDLVESMCRGGSSSVPAHDVLTWLDSRRDESVVYVCFGSRYVLTAKQIHELAAALEKTDVDFVY 307 (473)
Q Consensus 228 ~~~~~~~~vGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~V~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~ 307 (473)
++ ++++.|||+...... . ...........+++.+|||.++.+++|||||||....+.+++.+++.+|+.++++|||
T Consensus 237 ~~-~~v~~VGPl~~~~~~--~-~~~~~~~~~~~~~~~~wLd~~~~~sVvyvsfGS~~~l~~~q~~ela~gl~~s~~~FlW 312 (472)
T PLN02670 237 YR-KPIIPIGFLPPVIED--D-EEDDTIDVKGWVRIKEWLDKQRVNSVVYVALGTEASLRREEVTELALGLEKSETPFFW 312 (472)
T ss_pred hC-CCeEEEecCCccccc--c-ccccccccchhHHHHHHHhcCCCCceEEEEecccccCCHHHHHHHHHHHHHCCCCEEE
Confidence 55 689999999753101 0 0000000012357999999988899999999999999999999999999999999999
Q ss_pred EEeCCCccCCccc-CCCCchhhHHhhcCCCeEeecCccHHHhhhccCccceeeccCchhHHHHHhhCCeEecCcccccch
Q 042753 308 CVREPDERHASQD-CGVLPDGFEDRVAGRGYVIRGWSQQVAILRHKAVGAFLTHCGWNSVLEGVSAGVVMLTWPMDADQY 386 (473)
Q Consensus 308 ~~~~~~~~~~~~~-~~~lp~~~~~~~~~~nv~v~~~~pq~~lL~~~~v~~~ItHgG~~s~~eal~~GvP~l~~P~~~DQ~ 386 (473)
+++.+. + .+.+ .+.+|++|.++...+++++.+|+||.+||+|+++++|||||||||++||+++|||||++|+++||+
T Consensus 313 v~r~~~-~-~~~~~~~~lp~~f~~~~~~rG~vv~~W~PQ~~IL~H~~v~~FvtHcGwnS~~Eai~~GVP~l~~P~~~DQ~ 390 (472)
T PLN02670 313 VLRNEP-G-TTQNALEMLPDGFEERVKGRGMIHVGWVPQVKILSHESVGGFLTHCGWNSVVEGLGFGRVLILFPVLNEQG 390 (472)
T ss_pred EEcCCc-c-cccchhhcCChHHHHhccCCCeEEeCcCCHHHHhcCcccceeeecCCcchHHHHHHcCCCEEeCcchhccH
Confidence 998631 0 0111 135899999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHhcceEEeccCC-CCCCCHHHHHHHHHHHhCCc--HHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHh
Q 042753 387 TNAQLLVDQLGVGIRVGEGT-RNIPESDELARLLAQSVDGP--RRERLKARELSGAALSAVVKGGSSDRDLNDFIKRINE 463 (473)
Q Consensus 387 ~na~rv~~~~G~G~~l~~~~-~~~~~~~~l~~~i~~~l~~~--~~~~~~a~~~~~~~~~~~~~~gs~~~~~~~~~~~~~~ 463 (473)
.||++++ .+|+|+.++..+ ...++.++|+++|+++|.++ ++||+||+++++.++ +.++..++++.+++++++
T Consensus 391 ~Na~~v~-~~g~Gv~l~~~~~~~~~~~e~i~~av~~vm~~~~g~~~r~~a~~l~~~~~----~~~~~~~~~~~~~~~l~~ 465 (472)
T PLN02670 391 LNTRLLH-GKKLGLEVPRDERDGSFTSDSVAESVRLAMVDDAGEEIRDKAKEMRNLFG----DMDRNNRYVDELVHYLRE 465 (472)
T ss_pred HHHHHHH-HcCeeEEeeccccCCcCcHHHHHHHHHHHhcCcchHHHHHHHHHHHHHHh----CcchhHHHHHHHHHHHHH
Confidence 9999998 569999997311 13489999999999999774 479999999999996 457789999999999999
Q ss_pred hc
Q 042753 464 LK 465 (473)
Q Consensus 464 ~~ 465 (473)
+.
T Consensus 466 ~~ 467 (472)
T PLN02670 466 NR 467 (472)
T ss_pred hc
Confidence 86
|
|
| >PLN02173 UDP-glucosyl transferase family protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-65 Score=500.39 Aligned_cols=430 Identities=25% Similarity=0.443 Sum_probs=334.7
Q ss_pred CCCCccEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCCCChhhhhhhccCCCCCCeeEEEcCCCCCCCCCC-----
Q 042753 1 MLPAGAHILVYPFPTSGHIIPLLDLTNRLLTLGLNVTVLITQNNLPLLDSLNANHPSTSLQSLVLPQPKWPAGSP----- 75 (473)
Q Consensus 1 ~~~~~~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~i~~~~~~~~~~~~~f~~l~~~~~~~~~~----- 75 (473)
|.....||+++|+|++||++|++.||+.|+.+|+.|||++++.+...+.... .++++|..+|+ ++++
T Consensus 1 ~~~~~~hvv~~P~paqGHi~P~l~lAk~La~~G~~vT~v~t~~~~~~~~~~~----~~~i~~~~ipd----glp~~~~~~ 72 (449)
T PLN02173 1 MEKMRGHVLAVPFPSQGHITPIRQFCKRLHSKGFKTTHTLTTFIFNTIHLDP----SSPISIATISD----GYDQGGFSS 72 (449)
T ss_pred CCCCCcEEEEecCcccccHHHHHHHHHHHHcCCCEEEEEECCchhhhcccCC----CCCEEEEEcCC----CCCCccccc
Confidence 4445579999999999999999999999999999999999997765543221 13599998873 3332
Q ss_pred hhhHHHHHHHHHHHhhHHHHHHHhcC--CCCC-cEEEeCCCcchHHHHHHHhCCCcEEEecchHHHHHHHHhhhccCCCC
Q 042753 76 ATRLLKFMRVLRELHYPALLDWFKSH--PSPP-VAILSDFFLGWTQGLAAELGLPRVVFSPSGAFALSVSFAMWTDLPTN 152 (473)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~l~~~l~~~--~~~p-D~VV~D~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~p~~ 152 (473)
......+.....+...+.+.++|++. ..+| +|||+|.+++|+..+|+++|||.+.|++++++.+..+++...
T Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~Pv~cvV~D~f~~Wa~dVA~elgIP~v~F~~~~a~~~~~~~~~~~----- 147 (449)
T PLN02173 73 AGSVPEYLQNFKTFGSKTVADIIRKHQSTDNPITCIVYDSFMPWALDLAREFGLAAAPFFTQSCAVNYINYLSYI----- 147 (449)
T ss_pred ccCHHHHHHHHHHhhhHHHHHHHHHhhccCCCceEEEECCcchhHHHHHHHhCCCEEEEechHHHHHHHHHhHHh-----
Confidence 12233455555445667778877753 1145 999999999999999999999999999998887766543211
Q ss_pred CCCCCCCccccCCCCCCCCCCCccccchhhhccCCCCCchHHHHHHhhhccCCcEEeecchHHhhHHHHHHHHHhhCCCc
Q 042753 153 DDPDNVDALVSFPRVPNCPVYPWYQISHLYRTLKEGDPDWDLHRSNMMANKTSWGIVFNSFAELERVYIDHMKKEMGHDR 232 (473)
Q Consensus 153 ~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~le~~~~~~~~~~~~~~~ 232 (473)
.. ......+|+++. +..++++.++..........+.+.+......+++++++|||++||+.+++.+... ++
T Consensus 148 ~~---~~~~~~~pg~p~---l~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~~~~vlvNTf~eLE~~~~~~~~~~---~~ 218 (449)
T PLN02173 148 NN---GSLTLPIKDLPL---LELQDLPTFVTPTGSHLAYFEMVLQQFTNFDKADFVLVNSFHDLDLHENELLSKV---CP 218 (449)
T ss_pred cc---CCccCCCCCCCC---CChhhCChhhcCCCCchHHHHHHHHHHhhhccCCEEEEeCHHHhhHHHHHHHHhc---CC
Confidence 00 112345778775 6677787766432222223344445556677889999999999999999888652 36
Q ss_pred EEEeccCCCCCCcchhhc--cCCC--CCC--CChhhhHHHhcCCCCCcEEEEEeCCcccCCHHHHHHHHHHHHhCCCcEE
Q 042753 233 VWAVGPVLPPDDDLVESM--CRGG--SSS--VPAHDVLTWLDSRRDESVVYVCFGSRYVLTAKQIHELAAALEKTDVDFV 306 (473)
Q Consensus 233 ~~~vGpl~~~~~~~~~~~--~~~~--~~~--~~~~~~~~~l~~~~~~~~V~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i 306 (473)
++.|||+.+.. .+.... ..+. ..+ ..+++|.+||+.++.+++|||||||....+.+++.+++.+| .+.+|+
T Consensus 219 v~~VGPl~~~~-~~~~~~~~~~~~~~~~~~~~~~~~c~~WLd~~~~~svvyvsfGS~~~~~~~~~~ela~gL--s~~~fl 295 (449)
T PLN02173 219 VLTIGPTVPSM-YLDQQIKSDNDYDLNLFDLKEAALCTDWLDKRPQGSVVYIAFGSMAKLSSEQMEEIASAI--SNFSYL 295 (449)
T ss_pred eeEEcccCchh-hccccccccccccccccccccchHHHHHHhcCCCCceEEEEecccccCCHHHHHHHHHHh--cCCCEE
Confidence 99999997531 000000 0110 001 23456999999988889999999999999999999999999 777899
Q ss_pred EEEeCCCccCCcccCCCCchhhHHhhcCCCeEeecCccHHHhhhccCccceeeccCchhHHHHHhhCCeEecCcccccch
Q 042753 307 YCVREPDERHASQDCGVLPDGFEDRVAGRGYVIRGWSQQVAILRHKAVGAFLTHCGWNSVLEGVSAGVVMLTWPMDADQY 386 (473)
Q Consensus 307 ~~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~v~~~~pq~~lL~~~~v~~~ItHgG~~s~~eal~~GvP~l~~P~~~DQ~ 386 (473)
|+++.+. .+.+|++|.++...+|+++.+|+||.+||+|+++++|||||||||++||+++|||||++|+++||+
T Consensus 296 Wvvr~~~-------~~~lp~~~~~~~~~~~~~i~~W~PQ~~iL~H~~v~~FvtHcGwnS~~Eai~~GVP~l~~P~~~DQ~ 368 (449)
T PLN02173 296 WVVRASE-------ESKLPPGFLETVDKDKSLVLKWSPQLQVLSNKAIGCFMTHCGWNSTMEGLSLGVPMVAMPQWTDQP 368 (449)
T ss_pred EEEeccc-------hhcccchHHHhhcCCceEEeCCCCHHHHhCCCccceEEecCccchHHHHHHcCCCEEecCchhcch
Confidence 9998542 135889999888778888889999999999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHhcceEEeccCCC-CCCCHHHHHHHHHHHhCCc--HHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHH
Q 042753 387 TNAQLLVDQLGVGIRVGEGTR-NIPESDELARLLAQSVDGP--RRERLKARELSGAALSAVVKGGSSDRDLNDFIKRIN 462 (473)
Q Consensus 387 ~na~rv~~~~G~G~~l~~~~~-~~~~~~~l~~~i~~~l~~~--~~~~~~a~~~~~~~~~~~~~~gs~~~~~~~~~~~~~ 462 (473)
.||+++++.||+|+.+..++. ..++.++|+++|+++|.++ +.+|++|++++++.++++.+||||++++++|++++.
T Consensus 369 ~Na~~v~~~~g~Gv~v~~~~~~~~~~~e~v~~av~~vm~~~~~~~~r~~a~~~~~~a~~Av~~gGSS~~~l~~~v~~~~ 447 (449)
T PLN02173 369 MNAKYIQDVWKVGVRVKAEKESGIAKREEIEFSIKEVMEGEKSKEMKENAGKWRDLAVKSLSEGGSTDININTFVSKIQ 447 (449)
T ss_pred HHHHHHHHHhCceEEEeecccCCcccHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHhc
Confidence 999999988899999863111 2369999999999999765 589999999999999999999999999999999874
|
|
| >PLN02410 UDP-glucoronosyl/UDP-glucosyl transferase family protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.1e-65 Score=501.75 Aligned_cols=428 Identities=24% Similarity=0.404 Sum_probs=326.7
Q ss_pred CccEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCCCChhhhhhhccCCCCCCeeEEEcCCCCCCCCCCh----hhH
Q 042753 4 AGAHILVYPFPTSGHIIPLLDLTNRLLTLGLNVTVLITQNNLPLLDSLNANHPSTSLQSLVLPQPKWPAGSPA----TRL 79 (473)
Q Consensus 4 ~~~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~i~~~~~~~~~~~~~f~~l~~~~~~~~~~~----~~~ 79 (473)
+..||+++|+|++||++|++.||+.|+.||+.|||++++.+.... . ....+++|..+|+ ++|+. ...
T Consensus 6 ~~~HVvlvPfpaqGHi~P~l~LAk~La~~G~~VT~v~T~~n~~~~--~---~~~~~i~~~~ip~----glp~~~~~~~~~ 76 (451)
T PLN02410 6 ARRRVVLVPVPAQGHISPMMQLAKTLHLKGFSITIAQTKFNYFSP--S---DDFTDFQFVTIPE----SLPESDFKNLGP 76 (451)
T ss_pred CCCEEEEECCCccccHHHHHHHHHHHHcCCCEEEEEeCccccccc--c---cCCCCeEEEeCCC----CCCcccccccCH
Confidence 467999999999999999999999999999999999999764211 1 0113588888873 33321 111
Q ss_pred HHHHHHHHHHhhHHHHHHHhcC----CCCCcEEEeCCCcchHHHHHHHhCCCcEEEecchHHHHHHHHhhhcc------C
Q 042753 80 LKFMRVLRELHYPALLDWFKSH----PSPPVAILSDFFLGWTQGLAAELGLPRVVFSPSGAFALSVSFAMWTD------L 149 (473)
Q Consensus 80 ~~~~~~~~~~~~~~l~~~l~~~----~~~pD~VV~D~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~------~ 149 (473)
..+.....+.+.+.+.+++++. ..+++|||+|.+++|+..+|+++|||.+.|++++++.+..+.++... .
T Consensus 77 ~~~~~~~~~~~~~~~~~~L~~l~~~~~~p~~cVI~D~f~~Wa~dvA~~lgIP~v~F~t~~a~~~~~~~~~~~~~~~~~~~ 156 (451)
T PLN02410 77 IEFLHKLNKECQVSFKDCLGQLVLQQGNEIACVVYDEFMYFAEAAAKEFKLPNVIFSTTSATAFVCRSVFDKLYANNVLA 156 (451)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHhccCCCcEEEEECCcchHHHHHHHHcCCCEEEEEccCHHHHHHHHHHHHHHhccCCC
Confidence 1233333334445555555442 22579999999999999999999999999999999988776654221 1
Q ss_pred CCCCCCCCCCccccCCCCCCCCCCCccccchhhhccCCCCCchHHHHHHhhhccCCcEEeecchHHhhHHHHHHHHHhhC
Q 042753 150 PTNDDPDNVDALVSFPRVPNCPVYPWYQISHLYRTLKEGDPDWDLHRSNMMANKTSWGIVFNSFAELERVYIDHMKKEMG 229 (473)
Q Consensus 150 p~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~le~~~~~~~~~~~~ 229 (473)
|. .... ...+..+|+++. +..++++.+.... .......+... ....+++++++|||++||+.+++++....+
T Consensus 157 ~~-~~~~-~~~~~~iPg~~~---~~~~dlp~~~~~~--~~~~~~~~~~~-~~~~~~~~vlvNTf~eLE~~~~~~l~~~~~ 228 (451)
T PLN02410 157 PL-KEPK-GQQNELVPEFHP---LRCKDFPVSHWAS--LESIMELYRNT-VDKRTASSVIINTASCLESSSLSRLQQQLQ 228 (451)
T ss_pred Cc-cccc-cCccccCCCCCC---CChHHCcchhcCC--cHHHHHHHHHH-hhcccCCEEEEeChHHhhHHHHHHHHhccC
Confidence 22 1111 112335777764 4555555432211 11122222222 234678899999999999999999987666
Q ss_pred CCcEEEeccCCCCCCcchhhccCCCCCCCChhhhHHHhcCCCCCcEEEEEeCCcccCCHHHHHHHHHHHHhCCCcEEEEE
Q 042753 230 HDRVWAVGPVLPPDDDLVESMCRGGSSSVPAHDVLTWLDSRRDESVVYVCFGSRYVLTAKQIHELAAALEKTDVDFVYCV 309 (473)
Q Consensus 230 ~~~~~~vGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~V~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~ 309 (473)
+++++|||+.... . .+...+....++.+|||.++.+++|||||||....+.+++++++.+|+.++.+|+|++
T Consensus 229 -~~v~~vGpl~~~~-~------~~~~~~~~~~~~~~wLd~~~~~sVvyvsfGS~~~~~~~q~~ela~gLe~s~~~FlWv~ 300 (451)
T PLN02410 229 -IPVYPIGPLHLVA-S------APTSLLEENKSCIEWLNKQKKNSVIFVSLGSLALMEINEVMETASGLDSSNQQFLWVI 300 (451)
T ss_pred -CCEEEeccccccc-C------CCccccccchHHHHHHHhCCCCcEEEEEccccccCCHHHHHHHHHHHHhcCCCeEEEE
Confidence 6899999997543 1 0001122335689999998889999999999999999999999999999999999999
Q ss_pred eCCCccCCccc-CCCCchhhHHhhcCCCeEeecCccHHHhhhccCccceeeccCchhHHHHHhhCCeEecCcccccchhh
Q 042753 310 REPDERHASQD-CGVLPDGFEDRVAGRGYVIRGWSQQVAILRHKAVGAFLTHCGWNSVLEGVSAGVVMLTWPMDADQYTN 388 (473)
Q Consensus 310 ~~~~~~~~~~~-~~~lp~~~~~~~~~~nv~v~~~~pq~~lL~~~~v~~~ItHgG~~s~~eal~~GvP~l~~P~~~DQ~~n 388 (473)
+.+..+ +.+ .+.+|++|.+|...++ ++.+|+||.+||+|+++++|||||||||++||+++|||||++|++.||+.|
T Consensus 301 r~~~~~--~~~~~~~lp~~f~er~~~~g-~v~~w~PQ~~iL~h~~v~~fvtH~G~nS~~Ea~~~GvP~l~~P~~~DQ~~n 377 (451)
T PLN02410 301 RPGSVR--GSEWIESLPKEFSKIISGRG-YIVKWAPQKEVLSHPAVGGFWSHCGWNSTLESIGEGVPMICKPFSSDQKVN 377 (451)
T ss_pred ccCccc--ccchhhcCChhHHHhccCCe-EEEccCCHHHHhCCCccCeeeecCchhHHHHHHHcCCCEEeccccccCHHH
Confidence 853100 001 1348999999987655 555999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhcceEEeccCCCCCCCHHHHHHHHHHHhCCc--HHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHh
Q 042753 389 AQLLVDQLGVGIRVGEGTRNIPESDELARLLAQSVDGP--RRERLKARELSGAALSAVVKGGSSDRDLNDFIKRINE 463 (473)
Q Consensus 389 a~rv~~~~G~G~~l~~~~~~~~~~~~l~~~i~~~l~~~--~~~~~~a~~~~~~~~~~~~~~gs~~~~~~~~~~~~~~ 463 (473)
|+++++.||+|+.+. ..+++++|+++|+++|.++ +.|+++|+++++.+++++.+||||++++++|+++++.
T Consensus 378 a~~~~~~~~~G~~~~----~~~~~~~v~~av~~lm~~~~~~~~r~~a~~l~~~~~~a~~~gGsS~~~l~~fv~~~~~ 450 (451)
T PLN02410 378 ARYLECVWKIGIQVE----GDLDRGAVERAVKRLMVEEEGEEMRKRAISLKEQLRASVISGGSSHNSLEEFVHFMRT 450 (451)
T ss_pred HHHHHHHhCeeEEeC----CcccHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHh
Confidence 999998889999996 3689999999999999765 5899999999999999999999999999999999864
|
|
| >PLN02208 glycosyltransferase family protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.9e-65 Score=500.59 Aligned_cols=422 Identities=24% Similarity=0.354 Sum_probs=329.1
Q ss_pred ccEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCCCChhhhhhhccCCCCCCeeEEEcCCCCCCCCCCh-h---hH-
Q 042753 5 GAHILVYPFPTSGHIIPLLDLTNRLLTLGLNVTVLITQNNLPLLDSLNANHPSTSLQSLVLPQPKWPAGSPA-T---RL- 79 (473)
Q Consensus 5 ~~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~i~~~~~~~~~~~~~f~~l~~~~~~~~~~~-~---~~- 79 (473)
-.||+++|+|++||++|++.||+.|++|||+|||++++.+...+.+... ...++++..++++..+++++. . .+
T Consensus 4 ~~hvv~~P~paqGHi~P~l~LAk~La~~G~~VT~vtt~~~~~~i~~~~a--~~~~i~~~~l~~p~~dgLp~g~~~~~~l~ 81 (442)
T PLN02208 4 KFHAFMFPWFAFGHMIPFLHLANKLAEKGHRVTFLLPKKAQKQLEHHNL--FPDSIVFHPLTIPPVNGLPAGAETTSDIP 81 (442)
T ss_pred CCEEEEecCccccHHHHHHHHHHHHHhCCCEEEEEeccchhhhhhcccC--CCCceEEEEeCCCCccCCCCCcccccchh
Confidence 4799999999999999999999999999999999999988776654321 112467777766533455532 1 11
Q ss_pred ---HH-HHHHHHHHhhHHHHHHHhcCCCCCcEEEeCCCcchHHHHHHHhCCCcEEEecchHHHHHHHHhhhccCCCCCCC
Q 042753 80 ---LK-FMRVLRELHYPALLDWFKSHPSPPVAILSDFFLGWTQGLAAELGLPRVVFSPSGAFALSVSFAMWTDLPTNDDP 155 (473)
Q Consensus 80 ---~~-~~~~~~~~~~~~l~~~l~~~~~~pD~VV~D~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~p~~~~~ 155 (473)
.. +...+. .+.+.+.+++++. ++||||+| ++.|+..+|+++|||++.|++++++.+. +.+.. . ...
T Consensus 82 ~~l~~~~~~~~~-~~~~~l~~~L~~~--~~~cVV~D-~~~wa~~vA~e~giP~~~f~~~~a~~~~-~~~~~----~-~~~ 151 (442)
T PLN02208 82 ISMDNLLSEALD-LTRDQVEAAVRAL--RPDLIFFD-FAQWIPEMAKEHMIKSVSYIIVSATTIA-HTHVP----G-GKL 151 (442)
T ss_pred HHHHHHHHHHHH-HHHHHHHHHHhhC--CCeEEEEC-CcHhHHHHHHHhCCCEEEEEhhhHHHHH-HHccC----c-ccc
Confidence 11 233343 7778899999888 89999999 5789999999999999999999998653 33221 1 010
Q ss_pred CCCCccccCCCCCCC-CCCCccccchhhhccCCCCCchH-HHHHHhhhccCCcEEeecchHHhhHHHHHHHHHhhCCCcE
Q 042753 156 DNVDALVSFPRVPNC-PVYPWYQISHLYRTLKEGDPDWD-LHRSNMMANKTSWGIVFNSFAELERVYIDHMKKEMGHDRV 233 (473)
Q Consensus 156 ~~~~~~~~~p~l~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~s~~~le~~~~~~~~~~~~~~~~ 233 (473)
...+|+++.. +.+..++++.+. ....... +.....+...+++++++|||++||+.+++.+...++ +++
T Consensus 152 -----~~~~pglp~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~vl~Ntf~eLE~~~~~~~~~~~~-~~v 221 (442)
T PLN02208 152 -----GVPPPGYPSSKVLFRENDAHALA----TLSIFYKRLYHQITTGLKSCDVIALRTCKEIEGKFCDYISRQYH-KKV 221 (442)
T ss_pred -----CCCCCCCCCcccccCHHHcCccc----ccchHHHHHHHHHHhhhccCCEEEEECHHHHHHHHHHHHHhhcC-CCE
Confidence 1235777642 335555666431 1112222 233333456688999999999999999999987666 799
Q ss_pred EEeccCCCCCCcchhhccCCCCCCCChhhhHHHhcCCCCCcEEEEEeCCcccCCHHHHHHHHHHHHhCCCcEEEEEeCCC
Q 042753 234 WAVGPVLPPDDDLVESMCRGGSSSVPAHDVLTWLDSRRDESVVYVCFGSRYVLTAKQIHELAAALEKTDVDFVYCVREPD 313 (473)
Q Consensus 234 ~~vGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~V~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~ 313 (473)
+.|||+.... . . ....++++.+|||.+..+++|||||||....+.+++.+++.+++..+.+++|+.+.+.
T Consensus 222 ~~vGpl~~~~-~------~---~~~~~~~~~~wLd~~~~~sVvyvSfGS~~~l~~~q~~e~~~~l~~s~~pf~wv~r~~~ 291 (442)
T PLN02208 222 LLTGPMFPEP-D------T---SKPLEEQWSHFLSGFPPKSVVFCSLGSQIILEKDQFQELCLGMELTGLPFLIAVKPPR 291 (442)
T ss_pred EEEeecccCc-C------C---CCCCHHHHHHHHhcCCCCcEEEEeccccccCCHHHHHHHHHHHHhCCCcEEEEEeCCC
Confidence 9999998654 1 0 0235678999999988899999999999998999999999999888999999988541
Q ss_pred ccCCcccCCCCchhhHHhhcCCCeEeecCccHHHhhhccCccceeeccCchhHHHHHhhCCeEecCcccccchhhHHHHH
Q 042753 314 ERHASQDCGVLPDGFEDRVAGRGYVIRGWSQQVAILRHKAVGAFLTHCGWNSVLEGVSAGVVMLTWPMDADQYTNAQLLV 393 (473)
Q Consensus 314 ~~~~~~~~~~lp~~~~~~~~~~nv~v~~~~pq~~lL~~~~v~~~ItHgG~~s~~eal~~GvP~l~~P~~~DQ~~na~rv~ 393 (473)
+. ....+.+|++|.++...+|+++.+|+||.+||+|+++++|||||||||++||+++|||||++|+++||+.||++++
T Consensus 292 -~~-~~~~~~lp~~f~~r~~~~g~~v~~W~PQ~~iL~H~~v~~FvtHcG~nS~~Eai~~GVP~l~~P~~~DQ~~na~~~~ 369 (442)
T PLN02208 292 -GS-STVQEGLPEGFEERVKGRGVVWGGWVQQPLILDHPSIGCFVNHCGPGTIWESLVSDCQMVLIPFLSDQVLFTRLMT 369 (442)
T ss_pred -cc-cchhhhCCHHHHHHHhcCCcEeeccCCHHHHhcCCccCeEEccCCchHHHHHHHcCCCEEecCcchhhHHHHHHHH
Confidence 00 0112458999999999999999999999999999999999999999999999999999999999999999999988
Q ss_pred HHhcceEEeccCCCCCCCHHHHHHHHHHHhCCc----HHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHhh
Q 042753 394 DQLGVGIRVGEGTRNIPESDELARLLAQSVDGP----RRERLKARELSGAALSAVVKGGSSDRDLNDFIKRINEL 464 (473)
Q Consensus 394 ~~~G~G~~l~~~~~~~~~~~~l~~~i~~~l~~~----~~~~~~a~~~~~~~~~~~~~~gs~~~~~~~~~~~~~~~ 464 (473)
+.+|+|+.+++++.+.+++++|.++|+++|+++ +.+|++|+++++.+. .+|||++++++|++.+++.
T Consensus 370 ~~~g~gv~~~~~~~~~~~~~~l~~ai~~~m~~~~e~g~~~r~~~~~~~~~~~----~~gsS~~~l~~~v~~l~~~ 440 (442)
T PLN02208 370 EEFEVSVEVSREKTGWFSKESLSNAIKSVMDKDSDLGKLVRSNHTKLKEILV----SPGLLTGYVDKFVEELQEY 440 (442)
T ss_pred HHhceeEEeccccCCcCcHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHh----cCCcHHHHHHHHHHHHHHh
Confidence 768999999731112399999999999999764 359999999999984 4789999999999999764
|
|
| >PLN02555 limonoid glucosyltransferase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-64 Score=501.24 Aligned_cols=446 Identities=26% Similarity=0.421 Sum_probs=338.0
Q ss_pred ccEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCCCChhhhhhh--c-c---CCC-CCCeeEEEcCCCCCCCCCCh-
Q 042753 5 GAHILVYPFPTSGHIIPLLDLTNRLLTLGLNVTVLITQNNLPLLDSL--N-A---NHP-STSLQSLVLPQPKWPAGSPA- 76 (473)
Q Consensus 5 ~~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~i~~~--~-~---~~~-~~~~~f~~l~~~~~~~~~~~- 76 (473)
..||+++|+|++||++||+.||+.|+.||..|||++++.+..++.+. . . ... ...++|..+| ++++..
T Consensus 7 ~~HVv~~PfpaqGHi~Pml~lA~~La~~G~~vT~v~T~~~~~~~~~a~~~~~~~~~~~~~~~i~~~~~p----dglp~~~ 82 (480)
T PLN02555 7 LVHVMLVSFPGQGHVNPLLRLGKLLASKGLLVTFVTTESWGKKMRQANKIQDGVLKPVGDGFIRFEFFE----DGWAEDD 82 (480)
T ss_pred CCEEEEECCcccccHHHHHHHHHHHHhCCCeEEEEeccchhhhhhccccccccccccCCCCeEEEeeCC----CCCCCCc
Confidence 68999999999999999999999999999999999999877665431 1 0 000 1125555454 233321
Q ss_pred ---hhHHHHHHHHHHHhhHHHHHHHhcC---CCCCcEEEeCCCcchHHHHHHHhCCCcEEEecchHHHHHHHHhhhcc-C
Q 042753 77 ---TRLLKFMRVLRELHYPALLDWFKSH---PSPPVAILSDFFLGWTQGLAAELGLPRVVFSPSGAFALSVSFAMWTD-L 149 (473)
Q Consensus 77 ---~~~~~~~~~~~~~~~~~l~~~l~~~---~~~pD~VV~D~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~-~ 149 (473)
..+..++..+.+...+.+.++|++. ..+++|||+|.++.|+..+|+++|||.+.|++++++.++.+.+.... .
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~pv~ciV~D~~~~wa~~vA~~~gIP~~~F~t~~a~~~~~~~~~~~~~~ 162 (480)
T PLN02555 83 PRRQDLDLYLPQLELVGKREIPNLVKRYAEQGRPVSCLINNPFIPWVCDVAEELGIPSAVLWVQSCACFSAYYHYYHGLV 162 (480)
T ss_pred ccccCHHHHHHHHHHhhhHHHHHHHHHHhccCCCceEEEECCcchHHHHHHHHcCCCeEEeecccHHHHHHHHHHhhcCC
Confidence 1233444444445566777777643 11349999999999999999999999999999999988887766432 1
Q ss_pred CCCCCCCCCCccccCCCCCCCCCCCccccchhhhccCCCCCchHHHHHHhhhccCCcEEeecchHHhhHHHHHHHHHhhC
Q 042753 150 PTNDDPDNVDALVSFPRVPNCPVYPWYQISHLYRTLKEGDPDWDLHRSNMMANKTSWGIVFNSFAELERVYIDHMKKEMG 229 (473)
Q Consensus 150 p~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~le~~~~~~~~~~~~ 229 (473)
+. ......+.+..+|++|. +..++++.++..........+.+.+......+++++++|||++||+.+++.+... .
T Consensus 163 ~~-~~~~~~~~~~~iPglp~---l~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~a~~vlvNTf~eLE~~~~~~l~~~-~ 237 (480)
T PLN02555 163 PF-PTETEPEIDVQLPCMPL---LKYDEIPSFLHPSSPYPFLRRAILGQYKNLDKPFCILIDTFQELEKEIIDYMSKL-C 237 (480)
T ss_pred Cc-ccccCCCceeecCCCCC---cCHhhCcccccCCCCchHHHHHHHHHHHhcccCCEEEEEchHHHhHHHHHHHhhC-C
Confidence 21 11111123456888875 6777887765321112223444555556677889999999999999999988663 3
Q ss_pred CCcEEEeccCCCCCCcchhhccCCCCCCCChhhhHHHhcCCCCCcEEEEEeCCcccCCHHHHHHHHHHHHhCCCcEEEEE
Q 042753 230 HDRVWAVGPVLPPDDDLVESMCRGGSSSVPAHDVLTWLDSRRDESVVYVCFGSRYVLTAKQIHELAAALEKTDVDFVYCV 309 (473)
Q Consensus 230 ~~~~~~vGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~V~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~ 309 (473)
+ ++.|||+...... .+ ...++..+..++++.+||+.+..+++|||||||+...+.+++.+++.+|+..+++|||++
T Consensus 238 -~-v~~iGPl~~~~~~-~~-~~~~~~~~~~~~~~~~wLd~~~~~sVvyvsfGS~~~~~~~q~~ela~~l~~~~~~flW~~ 313 (480)
T PLN02555 238 -P-IKPVGPLFKMAKT-PN-SDVKGDISKPADDCIEWLDSKPPSSVVYISFGTVVYLKQEQIDEIAYGVLNSGVSFLWVM 313 (480)
T ss_pred -C-EEEeCcccCcccc-cc-ccccccccccchhHHHHHhCCCCCceeEEEeccccCCCHHHHHHHHHHHHhcCCeEEEEE
Confidence 4 9999999764301 00 011111123456899999998778999999999999999999999999999999999999
Q ss_pred eCCCccCCcccCCCCchhhHHhhcCCCeEeecCccHHHhhhccCccceeeccCchhHHHHHhhCCeEecCcccccchhhH
Q 042753 310 REPDERHASQDCGVLPDGFEDRVAGRGYVIRGWSQQVAILRHKAVGAFLTHCGWNSVLEGVSAGVVMLTWPMDADQYTNA 389 (473)
Q Consensus 310 ~~~~~~~~~~~~~~lp~~~~~~~~~~nv~v~~~~pq~~lL~~~~v~~~ItHgG~~s~~eal~~GvP~l~~P~~~DQ~~na 389 (473)
+...... ....+.+|++|.++.. .|..+.+|+||.+||+|+++++|||||||||++||+++|||||++|+++||+.||
T Consensus 314 ~~~~~~~-~~~~~~lp~~~~~~~~-~~g~v~~W~PQ~~iL~H~~v~~FvtH~G~nS~~Eai~~GVP~l~~P~~~DQ~~Na 391 (480)
T PLN02555 314 RPPHKDS-GVEPHVLPEEFLEKAG-DKGKIVQWCPQEKVLAHPSVACFVTHCGWNSTMEALSSGVPVVCFPQWGDQVTDA 391 (480)
T ss_pred ecCcccc-cchhhcCChhhhhhcC-CceEEEecCCHHHHhCCCccCeEEecCCcchHHHHHHcCCCEEeCCCccccHHHH
Confidence 8431000 0111358888888775 4556679999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhcceEEeccC--CCCCCCHHHHHHHHHHHhCCc--HHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHhhc
Q 042753 390 QLLVDQLGVGIRVGEG--TRNIPESDELARLLAQSVDGP--RRERLKARELSGAALSAVVKGGSSDRDLNDFIKRINELK 465 (473)
Q Consensus 390 ~rv~~~~G~G~~l~~~--~~~~~~~~~l~~~i~~~l~~~--~~~~~~a~~~~~~~~~~~~~~gs~~~~~~~~~~~~~~~~ 465 (473)
+++++.||+|+.+.++ +...++.++|.++|+++|.++ +.+|+||++|+++.++++.+||||++++++|++++.+..
T Consensus 392 ~~~~~~~gvGv~l~~~~~~~~~v~~~~v~~~v~~vm~~~~g~~~r~ra~~l~~~a~~A~~egGSS~~~l~~~v~~i~~~~ 471 (480)
T PLN02555 392 VYLVDVFKTGVRLCRGEAENKLITREEVAECLLEATVGEKAAELKQNALKWKEEAEAAVAEGGSSDRNFQEFVDKLVRKS 471 (480)
T ss_pred HHHHHHhCceEEccCCccccCcCcHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHhcc
Confidence 9999889999999421 134689999999999999765 689999999999999999999999999999999998763
|
|
| >PLN02764 glycosyltransferase family protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-64 Score=494.49 Aligned_cols=432 Identities=26% Similarity=0.393 Sum_probs=333.4
Q ss_pred CCccEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCCCChhhhhhhccCCCCCCeeEEEcCCCCCCCCCCh------
Q 042753 3 PAGAHILVYPFPTSGHIIPLLDLTNRLLTLGLNVTVLITQNNLPLLDSLNANHPSTSLQSLVLPQPKWPAGSPA------ 76 (473)
Q Consensus 3 ~~~~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~i~~~~~~~~~~~~~f~~l~~~~~~~~~~~------ 76 (473)
....||+++|+|++||++|++.||+.|+.||+.|||++++.+...+...........+.+..+|. .+++++.
T Consensus 3 ~~~~Hvvl~P~paqGHi~P~l~LAk~La~~g~~vT~~tt~~~~~~~~~~~~~~~~~~v~~~~~p~--~~glp~g~e~~~~ 80 (453)
T PLN02764 3 GLKFHVLMYPWFATGHMTPFLFLANKLAEKGHTVTFLLPKKALKQLEHLNLFPHNIVFRSVTVPH--VDGLPVGTETVSE 80 (453)
T ss_pred CCCcEEEEECCcccccHHHHHHHHHHHHhCCCEEEEEeCcchhhhhcccccCCCCceEEEEECCC--cCCCCCccccccc
Confidence 44579999999999999999999999999999999999998766554420000011255555553 2355432
Q ss_pred ---hhHHHHHHHHHHHhhHHHHHHHhcCCCCCcEEEeCCCcchHHHHHHHhCCCcEEEecchHHHHHHHHhhhccCCCCC
Q 042753 77 ---TRLLKFMRVLRELHYPALLDWFKSHPSPPVAILSDFFLGWTQGLAAELGLPRVVFSPSGAFALSVSFAMWTDLPTND 153 (473)
Q Consensus 77 ---~~~~~~~~~~~~~~~~~l~~~l~~~~~~pD~VV~D~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~p~~~ 153 (473)
.....+...+. .+.+.+.+++++. +|||||+|. ++|+..+|+++|||.+.|++++++.+..+.+ +. .
T Consensus 81 ~~~~~~~~~~~a~~-~~~~~~~~~l~~~--~~~~iV~D~-~~w~~~vA~~~gIP~~~f~~~~a~~~~~~~~-----~~-~ 150 (453)
T PLN02764 81 IPVTSADLLMSAMD-LTRDQVEVVVRAV--EPDLIFFDF-AHWIPEVARDFGLKTVKYVVVSASTIASMLV-----PG-G 150 (453)
T ss_pred CChhHHHHHHHHHH-HhHHHHHHHHHhC--CCCEEEECC-chhHHHHHHHhCCCEEEEEcHHHHHHHHHhc-----cc-c
Confidence 11123444444 6678899999888 889999995 7899999999999999999999987777542 11 1
Q ss_pred CCCCCCccccCCCCCCC-CCCCccccchhhhcc--CCCCCchHHHHHHhhhccCCcEEeecchHHhhHHHHHHHHHhhCC
Q 042753 154 DPDNVDALVSFPRVPNC-PVYPWYQISHLYRTL--KEGDPDWDLHRSNMMANKTSWGIVFNSFAELERVYIDHMKKEMGH 230 (473)
Q Consensus 154 ~~~~~~~~~~~p~l~~~-~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~le~~~~~~~~~~~~~ 230 (473)
.. ..++|++|.. +.++.++++.+.... ........++.+......++.++++|||++||+.+++.+....+
T Consensus 151 ~~-----~~~~pglp~~~v~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~vlvNTf~eLE~~~~~~~~~~~~- 224 (453)
T PLN02764 151 EL-----GVPPPGYPSSKVLLRKQDAYTMKNLEPTNTIDVGPNLLERVTTSLMNSDVIAIRTAREIEGNFCDYIEKHCR- 224 (453)
T ss_pred cC-----CCCCCCCCCCcccCcHhhCcchhhcCCCccchhHHHHHHHHHHhhccCCEEEEeccHHhhHHHHHHHHhhcC-
Confidence 11 1224677632 124455555432211 01112334455554667788899999999999999999977555
Q ss_pred CcEEEeccCCCCCCcchhhccCCCCCCCChhhhHHHhcCCCCCcEEEEEeCCcccCCHHHHHHHHHHHHhCCCcEEEEEe
Q 042753 231 DRVWAVGPVLPPDDDLVESMCRGGSSSVPAHDVLTWLDSRRDESVVYVCFGSRYVLTAKQIHELAAALEKTDVDFVYCVR 310 (473)
Q Consensus 231 ~~~~~vGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~V~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~ 310 (473)
++++.|||+.... . .. ...++++.+|||.++.+++|||||||....+.+++.++..+|+..+.+|+|+++
T Consensus 225 ~~v~~VGPL~~~~-~------~~---~~~~~~cl~WLD~q~~~sVvyvsfGS~~~~~~~q~~ela~gL~~s~~pflwv~r 294 (453)
T PLN02764 225 KKVLLTGPVFPEP-D------KT---RELEERWVKWLSGYEPDSVVFCALGSQVILEKDQFQELCLGMELTGSPFLVAVK 294 (453)
T ss_pred CcEEEeccCccCc-c------cc---ccchhHHHHHHhCCCCCceEEEeecccccCCHHHHHHHHHHHHhCCCCeEEEEe
Confidence 6899999997543 1 00 113468999999999999999999999999999999999999999999999999
Q ss_pred CCCccCCcccCCCCchhhHHhhcCCCeEeecCccHHHhhhccCccceeeccCchhHHHHHhhCCeEecCcccccchhhHH
Q 042753 311 EPDERHASQDCGVLPDGFEDRVAGRGYVIRGWSQQVAILRHKAVGAFLTHCGWNSVLEGVSAGVVMLTWPMDADQYTNAQ 390 (473)
Q Consensus 311 ~~~~~~~~~~~~~lp~~~~~~~~~~nv~v~~~~pq~~lL~~~~v~~~ItHgG~~s~~eal~~GvP~l~~P~~~DQ~~na~ 390 (473)
.+.-. +...+.+|++|.++...+++++.+|+||.+||+|+++++|||||||||++||+++|||||++|++.||+.||+
T Consensus 295 ~~~~~--~~~~~~lp~~f~~r~~grG~v~~~W~PQ~~vL~h~~v~~FvtH~G~nS~~Eal~~GVP~l~~P~~~DQ~~na~ 372 (453)
T PLN02764 295 PPRGS--STIQEALPEGFEERVKGRGVVWGGWVQQPLILSHPSVGCFVSHCGFGSMWESLLSDCQIVLVPQLGDQVLNTR 372 (453)
T ss_pred CCCCC--cchhhhCCcchHhhhccCCcEEeCCCCHHHHhcCcccCeEEecCCchHHHHHHHcCCCEEeCCcccchHHHHH
Confidence 53200 0112459999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhcceEEeccCCCCCCCHHHHHHHHHHHhCCc----HHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHhhcc
Q 042753 391 LLVDQLGVGIRVGEGTRNIPESDELARLLAQSVDGP----RRERLKARELSGAALSAVVKGGSSDRDLNDFIKRINELKS 466 (473)
Q Consensus 391 rv~~~~G~G~~l~~~~~~~~~~~~l~~~i~~~l~~~----~~~~~~a~~~~~~~~~~~~~~gs~~~~~~~~~~~~~~~~~ 466 (473)
++++.+|+|+.+.+++...++.++|+++|+++|+++ +.+|++|+++++.+ ++||||++++++|++++++..+
T Consensus 373 ~l~~~~g~gv~~~~~~~~~~~~e~i~~av~~vm~~~~~~g~~~r~~a~~~~~~~----~~~GSS~~~l~~lv~~~~~~~~ 448 (453)
T PLN02764 373 LLSDELKVSVEVAREETGWFSKESLRDAINSVMKRDSEIGNLVKKNHTKWRETL----ASPGLLTGYVDNFIESLQDLVS 448 (453)
T ss_pred HHHHHhceEEEeccccCCccCHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHH----HhcCCHHHHHHHHHHHHHHhcc
Confidence 998678999998621113689999999999999763 45999999999998 5689999999999999999865
Q ss_pred CC
Q 042753 467 GK 468 (473)
Q Consensus 467 ~~ 468 (473)
+.
T Consensus 449 ~~ 450 (453)
T PLN02764 449 GT 450 (453)
T ss_pred cc
Confidence 54
|
|
| >PLN03015 UDP-glucosyl transferase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-64 Score=495.16 Aligned_cols=438 Identities=30% Similarity=0.485 Sum_probs=338.9
Q ss_pred cEEEEEcCCCCCChHHHHHHHHHHHhC-CCeEEEEeCCCChhhhh--hhccCC-CCCCeeEEEcCCCCCCCC-CCh-hhH
Q 042753 6 AHILVYPFPTSGHIIPLLDLTNRLLTL-GLNVTVLITQNNLPLLD--SLNANH-PSTSLQSLVLPQPKWPAG-SPA-TRL 79 (473)
Q Consensus 6 ~~Il~~~~~~~GH~~p~l~La~~L~~r-Gh~Vt~~~~~~~~~~i~--~~~~~~-~~~~~~f~~l~~~~~~~~-~~~-~~~ 79 (473)
+||+++|+|++||++|++.||+.|+.+ |..|||++++.+...+. ...... ..+++++..+|++..+++ +.. ...
T Consensus 4 pHvvl~P~p~qGHi~P~l~LAk~La~~~g~~vT~v~t~~~~~~~~~~~~~~~~~~~~~i~~~~lp~~~~~~l~~~~~~~~ 83 (470)
T PLN03015 4 PHALLVASPGLGHLIPILELGNRLSSVLNIHVTILAVTSGSSSPTETEAIHAAAARTTCQITEIPSVDVDNLVEPDATIF 83 (470)
T ss_pred cEEEEECCcccccHHHHHHHHHHHHhCCCCeEEEEECCCchhhhccccccccccCCCceEEEECCCCccccCCCCCccHH
Confidence 599999999999999999999999987 99999999887654431 111111 112599999997655555 322 222
Q ss_pred HHHHHHHHHHhhHHHHHHHhcCCCCCcEEEeCCCcchHHHHHHHhCCC-cEEEecchHHHHHHHHhhhccC-CCCCCCCC
Q 042753 80 LKFMRVLRELHYPALLDWFKSHPSPPVAILSDFFLGWTQGLAAELGLP-RVVFSPSGAFALSVSFAMWTDL-PTNDDPDN 157 (473)
Q Consensus 80 ~~~~~~~~~~~~~~l~~~l~~~~~~pD~VV~D~~~~~~~~~A~~~giP-~v~~~~~~~~~~~~~~~~~~~~-p~~~~~~~ 157 (473)
..+...+. .+.+.+.++|++...+++|||+|.+++|+..+|+++||| .+.+++++++....+.++.... +.......
T Consensus 84 ~~~~~~~~-~~~~~~~~~l~~l~~~~~ciV~D~f~~w~~~vA~~lgIP~~~~f~~~~a~~~~~~~~l~~~~~~~~~~~~~ 162 (470)
T PLN03015 84 TKMVVKMR-AMKPAVRDAVKSMKRKPTVMIVDFFGTALMSIADDVGVTAKYVYIPSHAWFLAVMVYLPVLDTVVEGEYVD 162 (470)
T ss_pred HHHHHHHH-hchHHHHHHHHhcCCCCeEEEEcCCcHHHHHHHHHcCCCEEEEEcCHHHHHHHHHHhhhhhhcccccccCC
Confidence 34444444 677888888887533679999999999999999999999 5888888888776665543211 11000001
Q ss_pred CCccccCCCCCCCCCCCccccchhhhccCCCCCchHHHHHHhhhccCCcEEeecchHHhhHHHHHHHHHhh------CCC
Q 042753 158 VDALVSFPRVPNCPVYPWYQISHLYRTLKEGDPDWDLHRSNMMANKTSWGIVFNSFAELERVYIDHMKKEM------GHD 231 (473)
Q Consensus 158 ~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~le~~~~~~~~~~~------~~~ 231 (473)
...+..+|+++. +..++++..+... .......+.+......+++|+++|||++||+.+++.+...+ . +
T Consensus 163 ~~~~~~vPg~p~---l~~~dlp~~~~~~--~~~~~~~~~~~~~~~~~a~gvlvNTf~eLE~~~~~~l~~~~~~~~~~~-~ 236 (470)
T PLN03015 163 IKEPLKIPGCKP---VGPKELMETMLDR--SDQQYKECVRSGLEVPMSDGVLVNTWEELQGNTLAALREDMELNRVMK-V 236 (470)
T ss_pred CCCeeeCCCCCC---CChHHCCHhhcCC--CcHHHHHHHHHHHhcccCCEEEEechHHHhHHHHHHHHhhcccccccC-C
Confidence 113456788875 7777787655322 11123333344456788999999999999999999987642 2 4
Q ss_pred cEEEeccCCCCCCcchhhccCCCCCCCChhhhHHHhcCCCCCcEEEEEeCCcccCCHHHHHHHHHHHHhCCCcEEEEEeC
Q 042753 232 RVWAVGPVLPPDDDLVESMCRGGSSSVPAHDVLTWLDSRRDESVVYVCFGSRYVLTAKQIHELAAALEKTDVDFVYCVRE 311 (473)
Q Consensus 232 ~~~~vGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~V~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~ 311 (473)
+++.|||+.... . . ...++++.+|||.++.+++|||||||....+.+++++++.+|+.++++|||+++.
T Consensus 237 ~v~~VGPl~~~~-~-----~-----~~~~~~~~~WLd~~~~~sVvyvsFGS~~~~~~~q~~ela~gl~~s~~~FlWv~r~ 305 (470)
T PLN03015 237 PVYPIGPIVRTN-V-----H-----VEKRNSIFEWLDKQGERSVVYVCLGSGGTLTFEQTVELAWGLELSGQRFVWVLRR 305 (470)
T ss_pred ceEEecCCCCCc-c-----c-----ccchHHHHHHHHhCCCCCEEEEECCcCCcCCHHHHHHHHHHHHhCCCcEEEEEec
Confidence 699999998533 1 0 1123579999999888999999999999999999999999999999999999974
Q ss_pred CCc-----cC-CcccCCCCchhhHHhhcCCCeEeecCccHHHhhhccCccceeeccCchhHHHHHhhCCeEecCcccccc
Q 042753 312 PDE-----RH-ASQDCGVLPDGFEDRVAGRGYVIRGWSQQVAILRHKAVGAFLTHCGWNSVLEGVSAGVVMLTWPMDADQ 385 (473)
Q Consensus 312 ~~~-----~~-~~~~~~~lp~~~~~~~~~~nv~v~~~~pq~~lL~~~~v~~~ItHgG~~s~~eal~~GvP~l~~P~~~DQ 385 (473)
+.. .. .+...+.+|++|.+++..+++++.+|+||.+||+|+++++|||||||||++||+++|||||++|++.||
T Consensus 306 ~~~~~~~~~~~~~~~~~~lp~~f~er~~~rGl~v~~W~PQ~~vL~h~~vg~fvtH~GwnS~~Eai~~GvP~v~~P~~~DQ 385 (470)
T PLN03015 306 PASYLGASSSDDDQVSASLPEGFLDRTRGVGLVVTQWAPQVEILSHRSIGGFLSHCGWSSVLESLTKGVPIVAWPLYAEQ 385 (470)
T ss_pred CccccccccccccchhhcCChHHHHhhccCceEEEecCCHHHHhccCccCeEEecCCchhHHHHHHcCCCEEecccccch
Confidence 310 00 000113589999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhHHHHHHHhcceEEecc-CCCCCCCHHHHHHHHHHHhCC---c-HHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHH
Q 042753 386 YTNAQLLVDQLGVGIRVGE-GTRNIPESDELARLLAQSVDG---P-RRERLKARELSGAALSAVVKGGSSDRDLNDFIKR 460 (473)
Q Consensus 386 ~~na~rv~~~~G~G~~l~~-~~~~~~~~~~l~~~i~~~l~~---~-~~~~~~a~~~~~~~~~~~~~~gs~~~~~~~~~~~ 460 (473)
+.||+++++.+|+|+.+.+ ++...+++++|+++|+++|.+ + +.+|+||++|+++.++++.+||||++++++++.+
T Consensus 386 ~~na~~~~~~~gvg~~~~~~~~~~~v~~e~i~~~v~~lm~~~~eeg~~~R~ra~~lk~~a~~Av~eGGSS~~nl~~~~~~ 465 (470)
T PLN03015 386 WMNATLLTEEIGVAVRTSELPSEKVIGREEVASLVRKIVAEEDEEGQKIRAKAEEVRVSSERAWSHGGSSYNSLFEWAKR 465 (470)
T ss_pred HHHHHHHHHHhCeeEEecccccCCccCHHHHHHHHHHHHccCcccHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHh
Confidence 9999999879999999952 112468999999999999952 2 6999999999999999999999999999999988
Q ss_pred H
Q 042753 461 I 461 (473)
Q Consensus 461 ~ 461 (473)
+
T Consensus 466 ~ 466 (470)
T PLN03015 466 C 466 (470)
T ss_pred c
Confidence 6
|
|
| >PLN02562 UDP-glycosyltransferase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-64 Score=498.31 Aligned_cols=431 Identities=20% Similarity=0.350 Sum_probs=330.3
Q ss_pred ccEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCCCChhhhhhhccCCCCCCeeEEEcCCCCCCCCCChhhHHHHHH
Q 042753 5 GAHILVYPFPTSGHIIPLLDLTNRLLTLGLNVTVLITQNNLPLLDSLNANHPSTSLQSLVLPQPKWPAGSPATRLLKFMR 84 (473)
Q Consensus 5 ~~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~i~~~~~~~~~~~~~f~~l~~~~~~~~~~~~~~~~~~~ 84 (473)
..||+++|+|++||++|++.||+.|+.+|++|||++++.+..++...... .++++|+.+|....++.+ ..+..+..
T Consensus 6 ~~HVVlvPfPaqGHi~PmL~LAk~Las~G~~VT~vtt~~~~~~~~~~~~~--~~~i~~v~lp~g~~~~~~--~~~~~l~~ 81 (448)
T PLN02562 6 RPKIILVPYPAQGHVTPMLKLASAFLSRGFEPVVITPEFIHRRISATLDP--KLGITFMSISDGQDDDPP--RDFFSIEN 81 (448)
T ss_pred CcEEEEEcCccccCHHHHHHHHHHHHhCCCEEEEEeCcchhhhhhhccCC--CCCEEEEECCCCCCCCcc--ccHHHHHH
Confidence 36999999999999999999999999999999999999887666544221 136899988853222211 12334444
Q ss_pred HHHHHhhHHHHHHHhcCC--CCCcEEEeCCCcchHHHHHHHhCCCcEEEecchHHHHHHHHhhhccCCC--CCCCC-C-C
Q 042753 85 VLRELHYPALLDWFKSHP--SPPVAILSDFFLGWTQGLAAELGLPRVVFSPSGAFALSVSFAMWTDLPT--NDDPD-N-V 158 (473)
Q Consensus 85 ~~~~~~~~~l~~~l~~~~--~~pD~VV~D~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~p~--~~~~~-~-~ 158 (473)
.+...+.+.+.+++++.. .+++|||+|.+.+|+..+|+++|||++.|+++++..++.+.+....... ..... . .
T Consensus 82 a~~~~~~~~l~~ll~~l~~~~pv~cvI~D~~~~w~~~vA~~~giP~~~f~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (448)
T PLN02562 82 SMENTMPPQLERLLHKLDEDGEVACMVVDLLASWAIGVADRCGVPVAGFWPVMLAAYRLIQAIPELVRTGLISETGCPRQ 161 (448)
T ss_pred HHHHhchHHHHHHHHHhcCCCCcEEEEECCccHhHHHHHHHhCCCEEEEechhHHHHHHHHHHHHHhhcccccccccccc
Confidence 544356677788887641 1348999999999999999999999999999999877766544321111 00000 0 0
Q ss_pred Ccc-ccCCCCCCCCCCCccccchhhhccCCCCCchHHHHHHhhhccCCcEEeecchHHhhHHHHHHHHHh----hCCCcE
Q 042753 159 DAL-VSFPRVPNCPVYPWYQISHLYRTLKEGDPDWDLHRSNMMANKTSWGIVFNSFAELERVYIDHMKKE----MGHDRV 233 (473)
Q Consensus 159 ~~~-~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~le~~~~~~~~~~----~~~~~~ 233 (473)
..+ ..+|+++. +..++++.++..........+.+.+......++.++++|||++||+.+++.+... .. |++
T Consensus 162 ~~~~~~~Pg~~~---l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vlvNTf~eLE~~~~~~~~~~~~~~~~-~~v 237 (448)
T PLN02562 162 LEKICVLPEQPL---LSTEDLPWLIGTPKARKARFKFWTRTLERTKSLRWILMNSFKDEEYDDVKNHQASYNNGQN-PQI 237 (448)
T ss_pred ccccccCCCCCC---CChhhCcchhcCCCcchHHHHHHHHHHhccccCCEEEEcChhhhCHHHHHHHHhhhccccC-CCE
Confidence 011 24677764 6667777665432222223455666667777889999999999999888876542 23 689
Q ss_pred EEeccCCCCCCcchhhccCCCCCCCChhhhHHHhcCCCCCcEEEEEeCCcc-cCCHHHHHHHHHHHHhCCCcEEEEEeCC
Q 042753 234 WAVGPVLPPDDDLVESMCRGGSSSVPAHDVLTWLDSRRDESVVYVCFGSRY-VLTAKQIHELAAALEKTDVDFVYCVREP 312 (473)
Q Consensus 234 ~~vGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~V~vs~Gs~~-~~~~~~~~~~~~al~~~~~~~i~~~~~~ 312 (473)
+.|||+.... . . ...+......+.++.+||+.+..+++|||||||.. ..+.+++++++.+|++.+++|||+++..
T Consensus 238 ~~iGpl~~~~-~--~-~~~~~~~~~~~~~c~~wLd~~~~~svvyvsfGS~~~~~~~~~~~~l~~~l~~~g~~fiW~~~~~ 313 (448)
T PLN02562 238 LQIGPLHNQE-A--T-TITKPSFWEEDMSCLGWLQEQKPNSVIYISFGSWVSPIGESNVRTLALALEASGRPFIWVLNPV 313 (448)
T ss_pred EEecCccccc-c--c-ccCCCccccchHHHHHHHhcCCCCceEEEEecccccCCCHHHHHHHHHHHHHCCCCEEEEEcCC
Confidence 9999997654 1 0 00010001234567899999777899999999986 6789999999999999999999999764
Q ss_pred CccCCcccCCCCchhhHHhhcCCCeEeecCccHHHhhhccCccceeeccCchhHHHHHhhCCeEecCcccccchhhHHHH
Q 042753 313 DERHASQDCGVLPDGFEDRVAGRGYVIRGWSQQVAILRHKAVGAFLTHCGWNSVLEGVSAGVVMLTWPMDADQYTNAQLL 392 (473)
Q Consensus 313 ~~~~~~~~~~~lp~~~~~~~~~~nv~v~~~~pq~~lL~~~~v~~~ItHgG~~s~~eal~~GvP~l~~P~~~DQ~~na~rv 392 (473)
. .+.+|++|.++.. +|+++.+|+||.+||+|+++++|||||||||++||+++|||||++|+++||+.||+++
T Consensus 314 ~-------~~~l~~~~~~~~~-~~~~v~~w~PQ~~iL~h~~v~~fvtH~G~nS~~Eal~~GvP~l~~P~~~DQ~~na~~~ 385 (448)
T PLN02562 314 W-------REGLPPGYVERVS-KQGKVVSWAPQLEVLKHQAVGCYLTHCGWNSTMEAIQCQKRLLCYPVAGDQFVNCAYI 385 (448)
T ss_pred c-------hhhCCHHHHHHhc-cCEEEEecCCHHHHhCCCccceEEecCcchhHHHHHHcCCCEEeCCcccchHHHHHHH
Confidence 2 0348888888775 4667779999999999999999999999999999999999999999999999999999
Q ss_pred HHHhcceEEeccCCCCCCCHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHH
Q 042753 393 VDQLGVGIRVGEGTRNIPESDELARLLAQSVDGPRRERLKARELSGAALSAVVKGGSSDRDLNDFIKRIN 462 (473)
Q Consensus 393 ~~~~G~G~~l~~~~~~~~~~~~l~~~i~~~l~~~~~~~~~a~~~~~~~~~~~~~~gs~~~~~~~~~~~~~ 462 (473)
++.+|+|+.+. +++.++|.++|+++|+|+ +|++||++++++++++ ..||||++++++|+++++
T Consensus 386 ~~~~g~g~~~~-----~~~~~~l~~~v~~~l~~~-~~r~~a~~l~~~~~~~-~~gGSS~~nl~~~v~~~~ 448 (448)
T PLN02562 386 VDVWKIGVRIS-----GFGQKEVEEGLRKVMEDS-GMGERLMKLRERAMGE-EARLRSMMNFTTLKDELK 448 (448)
T ss_pred HHHhCceeEeC-----CCCHHHHHHHHHHHhCCH-HHHHHHHHHHHHHHhc-CCCCCHHHHHHHHHHHhC
Confidence 87689998886 479999999999999996 9999999999999876 667999999999999874
|
|
| >PLN02210 UDP-glucosyl transferase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.7e-64 Score=497.35 Aligned_cols=434 Identities=27% Similarity=0.421 Sum_probs=327.8
Q ss_pred ccEEEEEcCCCCCChHHHHHHHHH--HHhCCCeEEEEeCCCChhhhhhhccCCCCCCeeEEEcCCCCCCCCCCh--hhHH
Q 042753 5 GAHILVYPFPTSGHIIPLLDLTNR--LLTLGLNVTVLITQNNLPLLDSLNANHPSTSLQSLVLPQPKWPAGSPA--TRLL 80 (473)
Q Consensus 5 ~~~Il~~~~~~~GH~~p~l~La~~--L~~rGh~Vt~~~~~~~~~~i~~~~~~~~~~~~~f~~l~~~~~~~~~~~--~~~~ 80 (473)
..||+++|+|++||++|++.||++ |++||++|||++++.+..+++..... ...+++..++ +++++. ....
T Consensus 8 ~~hvv~~P~pa~GHi~P~l~La~~L~L~~~G~~VT~v~t~~~~~~~~~~~~~--~~~~~~~~~~----~glp~~~~~~~~ 81 (456)
T PLN02210 8 ETHVLMVTLAFQGHINPMLKLAKHLSLSSKNLHFTLATTEQARDLLSTVEKP--RRPVDLVFFS----DGLPKDDPRAPE 81 (456)
T ss_pred CCEEEEeCCcccccHHHHHHHHHHHHhhcCCcEEEEEeccchhhhhccccCC--CCceEEEECC----CCCCCCcccCHH
Confidence 579999999999999999999999 55899999999999887666432210 1246666555 344432 1222
Q ss_pred HHHHHHHHHhhHHHHHHHhcCCCCCcEEEeCCCcchHHHHHHHhCCCcEEEecchHHHHHHHHhhhcc-CCCCCCCCCCC
Q 042753 81 KFMRVLRELHYPALLDWFKSHPSPPVAILSDFFLGWTQGLAAELGLPRVVFSPSGAFALSVSFAMWTD-LPTNDDPDNVD 159 (473)
Q Consensus 81 ~~~~~~~~~~~~~l~~~l~~~~~~pD~VV~D~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~-~p~~~~~~~~~ 159 (473)
.+...+.+...+.+.+++++. +|||||+|.+++|+..+|+++|||.+.|+++++..+..+.+.... .+. ....+..
T Consensus 82 ~~~~~~~~~~~~~l~~~l~~~--~~~~vI~D~~~~w~~~vA~~lgIP~~~f~~~sa~~~~~~~~~~~~~~~~-~~~~~~~ 158 (456)
T PLN02210 82 TLLKSLNKVGAKNLSKIIEEK--RYSCIISSPFTPWVPAVAAAHNIPCAILWIQACGAYSVYYRYYMKTNSF-PDLEDLN 158 (456)
T ss_pred HHHHHHHHhhhHHHHHHHhcC--CCcEEEECCcchhHHHHHHHhCCCEEEEecccHHHHHHHHhhhhccCCC-CcccccC
Confidence 344444445567788889888 899999999999999999999999999999999888776654321 111 1111111
Q ss_pred ccccCCCCCCCCCCCccccchhhhccCCCCCch-HHHHHHhhhccCCcEEeecchHHhhHHHHHHHHHhhCCCcEEEecc
Q 042753 160 ALVSFPRVPNCPVYPWYQISHLYRTLKEGDPDW-DLHRSNMMANKTSWGIVFNSFAELERVYIDHMKKEMGHDRVWAVGP 238 (473)
Q Consensus 160 ~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~s~~~le~~~~~~~~~~~~~~~~~~vGp 238 (473)
.+..+|+++. +..++++.++... ..... ..+.+.......+.++++|||.++|+.+++.++. . +++++|||
T Consensus 159 ~~~~~Pgl~~---~~~~dl~~~~~~~--~~~~~~~~~~~~~~~~~~~~~vlvNTf~eLE~~~~~~l~~-~--~~v~~VGP 230 (456)
T PLN02210 159 QTVELPALPL---LEVRDLPSFMLPS--GGAHFNNLMAEFADCLRYVKWVLVNSFYELESEIIESMAD-L--KPVIPIGP 230 (456)
T ss_pred CeeeCCCCCC---CChhhCChhhhcC--CchHHHHHHHHHHHhcccCCEEEEeCHHHHhHHHHHHHhh-c--CCEEEEcc
Confidence 2345777764 5666666654321 11112 2333444455667899999999999999998876 2 47999999
Q ss_pred CCCCCC--cchhhccCCCC--CCCChhhhHHHhcCCCCCcEEEEEeCCcccCCHHHHHHHHHHHHhCCCcEEEEEeCCCc
Q 042753 239 VLPPDD--DLVESMCRGGS--SSVPAHDVLTWLDSRRDESVVYVCFGSRYVLTAKQIHELAAALEKTDVDFVYCVREPDE 314 (473)
Q Consensus 239 l~~~~~--~~~~~~~~~~~--~~~~~~~~~~~l~~~~~~~~V~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~ 314 (473)
+.+... ........+.. .+..+++|.+|++.++++++|||||||....+.+++++++.+|+.++++|||+++.+.
T Consensus 231 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wld~~~~~svvyvsfGS~~~~~~~~~~e~a~~l~~~~~~flw~~~~~~- 309 (456)
T PLN02210 231 LVSPFLLGDDEEETLDGKNLDMCKSDDCCMEWLDKQARSSVVYISFGSMLESLENQVETIAKALKNRGVPFLWVIRPKE- 309 (456)
T ss_pred cCchhhcCcccccccccccccccccchHHHHHHhCCCCCceEEEEecccccCCHHHHHHHHHHHHhCCCCEEEEEeCCc-
Confidence 975210 00000001100 1234567999999988899999999999989999999999999999999999998642
Q ss_pred cCCcccCCCCchhhHHhhcCCCeEeecCccHHHhhhccCccceeeccCchhHHHHHhhCCeEecCcccccchhhHHHHHH
Q 042753 315 RHASQDCGVLPDGFEDRVAGRGYVIRGWSQQVAILRHKAVGAFLTHCGWNSVLEGVSAGVVMLTWPMDADQYTNAQLLVD 394 (473)
Q Consensus 315 ~~~~~~~~~lp~~~~~~~~~~nv~v~~~~pq~~lL~~~~v~~~ItHgG~~s~~eal~~GvP~l~~P~~~DQ~~na~rv~~ 394 (473)
. ...++.|.++...++.++.+|+||.+||+|+++++|||||||||++||+++|||||++|++.||+.||+++++
T Consensus 310 ---~---~~~~~~~~~~~~~~~g~v~~w~PQ~~iL~h~~vg~FitH~G~nS~~Eai~~GVP~v~~P~~~DQ~~na~~~~~ 383 (456)
T PLN02210 310 ---K---AQNVQVLQEMVKEGQGVVLEWSPQEKILSHMAISCFVTHCGWNSTIETVVAGVPVVAYPSWTDQPIDARLLVD 383 (456)
T ss_pred ---c---ccchhhHHhhccCCCeEEEecCCHHHHhcCcCcCeEEeeCCcccHHHHHHcCCCEEecccccccHHHHHHHHH
Confidence 0 1233556666532333556999999999999999999999999999999999999999999999999999997
Q ss_pred HhcceEEeccCC-CCCCCHHHHHHHHHHHhCCc--HHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHH
Q 042753 395 QLGVGIRVGEGT-RNIPESDELARLLAQSVDGP--RRERLKARELSGAALSAVVKGGSSDRDLNDFIKRIN 462 (473)
Q Consensus 395 ~~G~G~~l~~~~-~~~~~~~~l~~~i~~~l~~~--~~~~~~a~~~~~~~~~~~~~~gs~~~~~~~~~~~~~ 462 (473)
.+|+|+.+..++ ...++.++|+++|+++|.++ +++|+||++|++..++++.+||||++++++|+++++
T Consensus 384 ~~g~G~~l~~~~~~~~~~~~~l~~av~~~m~~~~g~~~r~~a~~l~~~a~~Av~~gGSS~~~l~~~v~~~~ 454 (456)
T PLN02210 384 VFGIGVRMRNDAVDGELKVEEVERCIEAVTEGPAAADIRRRAAELKHVARLALAPGGSSARNLDLFISDIT 454 (456)
T ss_pred HhCeEEEEeccccCCcCCHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHh
Confidence 689999996311 13689999999999999875 369999999999999999999999999999999875
|
|
| >PLN03004 UDP-glycosyltransferase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-64 Score=495.05 Aligned_cols=430 Identities=28% Similarity=0.471 Sum_probs=324.7
Q ss_pred ccEEEEEcCCCCCChHHHHHHHHHHHhCC--CeEEE--EeCCCChhhhhhhcc--CCCCCCeeEEEcCCCCC-CCC-CCh
Q 042753 5 GAHILVYPFPTSGHIIPLLDLTNRLLTLG--LNVTV--LITQNNLPLLDSLNA--NHPSTSLQSLVLPQPKW-PAG-SPA 76 (473)
Q Consensus 5 ~~~Il~~~~~~~GH~~p~l~La~~L~~rG--h~Vt~--~~~~~~~~~i~~~~~--~~~~~~~~f~~l~~~~~-~~~-~~~ 76 (473)
-.||+++|+|++||++||+.||+.|+.+| +.||+ ++++.+...+..... ....++++|..+|++.. +.. ...
T Consensus 3 ~~Hvvl~P~p~qGHi~P~l~LA~~La~~g~~~~vti~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~lp~~~~~~~~~~~~ 82 (451)
T PLN03004 3 EEAIVLYPAPPIGHLVSMVELGKTILSKNPSLSIHIILVPPPYQPESTATYISSVSSSFPSITFHHLPAVTPYSSSSTSR 82 (451)
T ss_pred CcEEEEeCCcccchHHHHHHHHHHHHhCCCceEEEEEEecCcchhhhhhhhhccccCCCCCeEEEEcCCCCCCCCccccc
Confidence 36999999999999999999999999998 55555 444443322221111 01123699999886521 111 111
Q ss_pred hhH-HHHHHHHHHHhhHHHHHHHhcCC--CCCcEEEeCCCcchHHHHHHHhCCCcEEEecchHHHHHHHHhhhcc---CC
Q 042753 77 TRL-LKFMRVLRELHYPALLDWFKSHP--SPPVAILSDFFLGWTQGLAAELGLPRVVFSPSGAFALSVSFAMWTD---LP 150 (473)
Q Consensus 77 ~~~-~~~~~~~~~~~~~~l~~~l~~~~--~~pD~VV~D~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~---~p 150 (473)
... ..+..... ...+.+.+++++.. ++++|||+|.+++|+..+|+++|||.+.|++++++.+..+.+.... .+
T Consensus 83 ~~~~~~~~~~~~-~~~~~~~~~l~~l~~~~pv~cII~D~~~~Wa~~vA~~lgIP~v~F~t~sA~~~~~~~~~~~~~~~~~ 161 (451)
T PLN03004 83 HHHESLLLEILC-FSNPSVHRTLFSLSRNFNVRAMIIDFFCTAVLDITADFTFPVYFFYTSGAACLAFSFYLPTIDETTP 161 (451)
T ss_pred cCHHHHHHHHHH-hhhHHHHHHHHhcCCCCCceEEEECCcchhHHHHHHHhCCCEEEEeCHhHHHHHHHHHHHhcccccc
Confidence 111 12222233 45556666666541 1459999999999999999999999999999999988887664321 11
Q ss_pred CCCCCCCCCccccCCCCCCCCCCCccccchhhhccCCCCCchHHHHHHhhhccCCcEEeecchHHhhHHHHHHHHHhhCC
Q 042753 151 TNDDPDNVDALVSFPRVPNCPVYPWYQISHLYRTLKEGDPDWDLHRSNMMANKTSWGIVFNSFAELERVYIDHMKKEMGH 230 (473)
Q Consensus 151 ~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~le~~~~~~~~~~~~~ 230 (473)
. .. ..+..+..+|+++. +..++++.+.... .....+.+.+......++.++++|||++||+.+++.+...+..
T Consensus 162 ~-~~-~~~~~~v~iPg~p~---l~~~dlp~~~~~~--~~~~~~~~~~~~~~~~~~~~vl~NTf~eLE~~~l~~l~~~~~~ 234 (451)
T PLN03004 162 G-KN-LKDIPTVHIPGVPP---MKGSDMPKAVLER--DDEVYDVFIMFGKQLSKSSGIIINTFDALENRAIKAITEELCF 234 (451)
T ss_pred c-cc-cccCCeecCCCCCC---CChHHCchhhcCC--chHHHHHHHHHHHhhcccCeeeeeeHHHhHHHHHHHHHhcCCC
Confidence 1 00 01112346788875 6777888766432 1223455666667777888999999999999999999765321
Q ss_pred CcEEEeccCCCCCCcchhhccCCCCCCCChhhhHHHhcCCCCCcEEEEEeCCcccCCHHHHHHHHHHHHhCCCcEEEEEe
Q 042753 231 DRVWAVGPVLPPDDDLVESMCRGGSSSVPAHDVLTWLDSRRDESVVYVCFGSRYVLTAKQIHELAAALEKTDVDFVYCVR 310 (473)
Q Consensus 231 ~~~~~vGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~V~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~ 310 (473)
++++.|||+.... . ...+. ...+.++.+|||.++.+++|||||||....+.+++++++.+|+.++++|||+++
T Consensus 235 ~~v~~vGPl~~~~-~----~~~~~--~~~~~~c~~wLd~~~~~sVvyvsfGS~~~~~~~q~~ela~gL~~s~~~FlW~~r 307 (451)
T PLN03004 235 RNIYPIGPLIVNG-R----IEDRN--DNKAVSCLNWLDSQPEKSVVFLCFGSLGLFSKEQVIEIAVGLEKSGQRFLWVVR 307 (451)
T ss_pred CCEEEEeeeccCc-c----ccccc--cchhhHHHHHHHhCCCCceEEEEecccccCCHHHHHHHHHHHHHCCCCEEEEEc
Confidence 5799999997533 1 00011 112356999999988899999999999999999999999999999999999999
Q ss_pred CCCccCCcc---cCC-CCchhhHHhhcCCCeEeecCccHHHhhhccCccceeeccCchhHHHHHhhCCeEecCcccccch
Q 042753 311 EPDERHASQ---DCG-VLPDGFEDRVAGRGYVIRGWSQQVAILRHKAVGAFLTHCGWNSVLEGVSAGVVMLTWPMDADQY 386 (473)
Q Consensus 311 ~~~~~~~~~---~~~-~lp~~~~~~~~~~nv~v~~~~pq~~lL~~~~v~~~ItHgG~~s~~eal~~GvP~l~~P~~~DQ~ 386 (473)
.+... +. +.. .+|++|.+|...+|+++.+|+||.+||+|+++++|||||||||++||+++|||||++|++.||+
T Consensus 308 ~~~~~--~~~~~~~~~~lp~gf~er~~~~g~~v~~W~PQ~~iL~H~~v~~FvTH~G~nS~lEal~~GVP~v~~P~~~DQ~ 385 (451)
T PLN03004 308 NPPEL--EKTELDLKSLLPEGFLSRTEDKGMVVKSWAPQVPVLNHKAVGGFVTHCGWNSILEAVCAGVPMVAWPLYAEQR 385 (451)
T ss_pred CCccc--cccccchhhhCChHHHHhccCCcEEEEeeCCHHHHhCCCccceEeccCcchHHHHHHHcCCCEEeccccccch
Confidence 53100 00 112 3899999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHhcceEEeccCCCCCCCHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHhcCCChHH
Q 042753 387 TNAQLLVDQLGVGIRVGEGTRNIPESDELARLLAQSVDGPRRERLKARELSGAALSAVVKGGSSDR 452 (473)
Q Consensus 387 ~na~rv~~~~G~G~~l~~~~~~~~~~~~l~~~i~~~l~~~~~~~~~a~~~~~~~~~~~~~~gs~~~ 452 (473)
.||+++++.+|+|+.++.++...++.++|+++|+++|+|+ +|+++|+++++..+.++.+||||++
T Consensus 386 ~na~~~~~~~g~g~~l~~~~~~~~~~e~l~~av~~vm~~~-~~r~~a~~~~~~a~~Av~~GGSS~~ 450 (451)
T PLN03004 386 FNRVMIVDEIKIAISMNESETGFVSSTEVEKRVQEIIGEC-PVRERTMAMKNAAELALTETGSSHT 450 (451)
T ss_pred hhHHHHHHHhCceEEecCCcCCccCHHHHHHHHHHHhcCH-HHHHHHHHHHHHHHHHhcCCCCCCC
Confidence 9999999778999999731122579999999999999996 9999999999999999999999874
|
|
| >PLN02207 UDP-glycosyltransferase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-63 Score=492.26 Aligned_cols=440 Identities=27% Similarity=0.447 Sum_probs=330.1
Q ss_pred cEEEEEcCCCCCChHHHHHHHHHHHhCC--CeEEEEeCCCCh-hhhhhhccC--CCCCCeeEEEcCCCCCCCC--CChhh
Q 042753 6 AHILVYPFPTSGHIIPLLDLTNRLLTLG--LNVTVLITQNNL-PLLDSLNAN--HPSTSLQSLVLPQPKWPAG--SPATR 78 (473)
Q Consensus 6 ~~Il~~~~~~~GH~~p~l~La~~L~~rG--h~Vt~~~~~~~~-~~i~~~~~~--~~~~~~~f~~l~~~~~~~~--~~~~~ 78 (473)
.||+++|+|++||++|++.||+.|+.+| ..|||++++.+. ..+...... ...++++|..+|+...... .....
T Consensus 4 ~hvv~~P~p~qGHi~P~l~lA~~La~~gg~~~vT~~~t~~~~~~~~~~~~~~~~~~~~~i~~~~lp~~~~~~~~~~~~~~ 83 (468)
T PLN02207 4 AELIFIPTPTVGHLVPFLEFARRLIEQDDRIRITILLMKLQGQSHLDTYVKSIASSQPFVRFIDVPELEEKPTLGGTQSV 83 (468)
T ss_pred cEEEEeCCcchhhHHHHHHHHHHHHhCCCCeEEEEEEcCCCcchhhHHhhhhccCCCCCeEEEEeCCCCCCCccccccCH
Confidence 6999999999999999999999999998 999999999765 222222110 1123699999984221010 11111
Q ss_pred HHHHHHHHH---HHhhHHHHHHHhcCC---CCCcEEEeCCCcchHHHHHHHhCCCcEEEecchHHHHHHHHhhhcc-CCC
Q 042753 79 LLKFMRVLR---ELHYPALLDWFKSHP---SPPVAILSDFFLGWTQGLAAELGLPRVVFSPSGAFALSVSFAMWTD-LPT 151 (473)
Q Consensus 79 ~~~~~~~~~---~~~~~~l~~~l~~~~---~~pD~VV~D~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~-~p~ 151 (473)
...+...+. ..+.+.+.+++++.. ++++|||+|.+++|+..+|+++|||.+.|++++++.+..+.+.... .+.
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~pv~cvV~D~~~~w~~~vA~~~gip~~~f~~~~a~~~~~~~~~~~~~~~~ 163 (468)
T PLN02207 84 EAYVYDVIEKNIPLVRNIVMDILSSLALDGVKVKGFVADFFCLPMIDVAKDVSLPFYVFLTTNSGFLAMMQYLADRHSKD 163 (468)
T ss_pred HHHHHHHHHhcchhHHHHHHHHHHHhccCCCCeEEEEECCcchHHHHHHHHhCCCEEEEECccHHHHHHHHHhhhccccc
Confidence 122223332 122445666665431 1349999999999999999999999999999999877776554321 111
Q ss_pred CCC-CCCCCccccCCCC-CCCCCCCccccchhhhccCCCCCchHHHHHHhhhccCCcEEeecchHHhhHHHHHHHHHh-h
Q 042753 152 NDD-PDNVDALVSFPRV-PNCPVYPWYQISHLYRTLKEGDPDWDLHRSNMMANKTSWGIVFNSFAELERVYIDHMKKE-M 228 (473)
Q Consensus 152 ~~~-~~~~~~~~~~p~l-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~le~~~~~~~~~~-~ 228 (473)
... ....+.+..+|++ +. +..++++.++.. ... ...+.+......+.+++++|||++||+++++.+... .
T Consensus 164 ~~~~~~~~~~~~~vPgl~~~---l~~~dlp~~~~~---~~~-~~~~~~~~~~~~~~~~vlvNtf~~LE~~~~~~~~~~~~ 236 (468)
T PLN02207 164 TSVFVRNSEEMLSIPGFVNP---VPANVLPSALFV---EDG-YDAYVKLAILFTKANGILVNSSFDIEPYSVNHFLDEQN 236 (468)
T ss_pred cccCcCCCCCeEECCCCCCC---CChHHCcchhcC---Ccc-HHHHHHHHHhcccCCEEEEEchHHHhHHHHHHHHhccC
Confidence 000 0011134567887 34 777778776532 111 344445555677889999999999999999888652 3
Q ss_pred CCCcEEEeccCCCCCCcchhhccCCCC-CCCChhhhHHHhcCCCCCcEEEEEeCCcccCCHHHHHHHHHHHHhCCCcEEE
Q 042753 229 GHDRVWAVGPVLPPDDDLVESMCRGGS-SSVPAHDVLTWLDSRRDESVVYVCFGSRYVLTAKQIHELAAALEKTDVDFVY 307 (473)
Q Consensus 229 ~~~~~~~vGpl~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~~~~~V~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~ 307 (473)
. |+++.|||+.... . ..... ....++++.+|||.++.+++|||||||....+.+++++++.+|+.++++|||
T Consensus 237 ~-p~v~~VGPl~~~~-~-----~~~~~~~~~~~~~~~~WLd~~~~~sVVyvSfGS~~~~~~~q~~ela~~l~~~~~~flW 309 (468)
T PLN02207 237 Y-PSVYAVGPIFDLK-A-----QPHPEQDLARRDELMKWLDDQPEASVVFLCFGSMGRLRGPLVKEIAHGLELCQYRFLW 309 (468)
T ss_pred C-CcEEEecCCcccc-c-----CCCCccccchhhHHHHHHhcCCCCcEEEEEeccCcCCCHHHHHHHHHHHHHCCCcEEE
Confidence 3 6899999997643 1 00000 0112367999999988889999999999999999999999999999999999
Q ss_pred EEeCCCccCCcccCCCCchhhHHhhcCCCeEeecCccHHHhhhccCccceeeccCchhHHHHHhhCCeEecCcccccchh
Q 042753 308 CVREPDERHASQDCGVLPDGFEDRVAGRGYVIRGWSQQVAILRHKAVGAFLTHCGWNSVLEGVSAGVVMLTWPMDADQYT 387 (473)
Q Consensus 308 ~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~v~~~~pq~~lL~~~~v~~~ItHgG~~s~~eal~~GvP~l~~P~~~DQ~~ 387 (473)
+++.+. ....+.+|++|.++...++ .+.+|+||.+||+|+++++|||||||||++||+++|||||++|+++||+.
T Consensus 310 ~~r~~~----~~~~~~lp~~f~er~~~~g-~i~~W~PQ~~IL~H~~vg~FvTH~GwnS~~Eai~~GVP~l~~P~~~DQ~~ 384 (468)
T PLN02207 310 SLRTEE----VTNDDLLPEGFLDRVSGRG-MICGWSPQVEILAHKAVGGFVSHCGWNSIVESLWFGVPIVTWPMYAEQQL 384 (468)
T ss_pred EEeCCC----ccccccCCHHHHhhcCCCe-EEEEeCCHHHHhcccccceeeecCccccHHHHHHcCCCEEecCccccchh
Confidence 999632 1112458999998887555 55699999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHhcceEEeccC----CCCCCCHHHHHHHHHHHhC--CcHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHH
Q 042753 388 NAQLLVDQLGVGIRVGEG----TRNIPESDELARLLAQSVD--GPRRERLKARELSGAALSAVVKGGSSDRDLNDFIKRI 461 (473)
Q Consensus 388 na~rv~~~~G~G~~l~~~----~~~~~~~~~l~~~i~~~l~--~~~~~~~~a~~~~~~~~~~~~~~gs~~~~~~~~~~~~ 461 (473)
||+++++.+|+|+.+..+ ....++.++|.++|+++|. + ++||+||+++++.+++++.+||||++++++|++++
T Consensus 385 Na~~~~~~~gvGv~~~~~~~~~~~~~v~~e~i~~av~~vm~~~~-~~~r~~a~~l~~~a~~A~~~GGSS~~~l~~~v~~~ 463 (468)
T PLN02207 385 NAFLMVKELKLAVELKLDYRVHSDEIVNANEIETAIRCVMNKDN-NVVRKRVMDISQMIQRATKNGGSSFAAIEKFIHDV 463 (468)
T ss_pred hHHHHHHHhCceEEEecccccccCCcccHHHHHHHHHHHHhcch-HHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHH
Confidence 999998778999977411 0134699999999999997 4 49999999999999999999999999999999998
Q ss_pred Hhhc
Q 042753 462 NELK 465 (473)
Q Consensus 462 ~~~~ 465 (473)
...+
T Consensus 464 ~~~~ 467 (468)
T PLN02207 464 IGIK 467 (468)
T ss_pred Hhcc
Confidence 8643
|
|
| >PLN02152 indole-3-acetate beta-glucosyltransferase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-63 Score=491.03 Aligned_cols=431 Identities=27% Similarity=0.448 Sum_probs=323.1
Q ss_pred cEEEEEcCCCCCChHHHHHHHHHHHh-CCCeEEEEeCCCC-hhhhhhhccCCCCCCeeEEEcCCCCCCCCCCh-----hh
Q 042753 6 AHILVYPFPTSGHIIPLLDLTNRLLT-LGLNVTVLITQNN-LPLLDSLNANHPSTSLQSLVLPQPKWPAGSPA-----TR 78 (473)
Q Consensus 6 ~~Il~~~~~~~GH~~p~l~La~~L~~-rGh~Vt~~~~~~~-~~~i~~~~~~~~~~~~~f~~l~~~~~~~~~~~-----~~ 78 (473)
.||+++|+|++||++|++.||+.|+. +|+.|||++++.+ ...+.... ...++++|..++ ++++.. ..
T Consensus 4 ~hvv~~P~p~qGHi~P~l~La~~La~~~G~~vT~v~t~~~~~~~~~~~~--~~~~~i~~~~i~----dglp~g~~~~~~~ 77 (455)
T PLN02152 4 PHFLLVTFPAQGHVNPSLRFARRLIKTTGTRVTFATCLSVIHRSMIPNH--NNVENLSFLTFS----DGFDDGVISNTDD 77 (455)
T ss_pred cEEEEecCcccccHHHHHHHHHHHhhCCCcEEEEEeccchhhhhhhccC--CCCCCEEEEEcC----CCCCCcccccccc
Confidence 49999999999999999999999996 6999999999954 22221111 111358888886 233321 12
Q ss_pred HHHHHHHHHHHhhHHHHHHHhcC--C-CCCcEEEeCCCcchHHHHHHHhCCCcEEEecchHHHHHHHHhhhccCCCCCCC
Q 042753 79 LLKFMRVLRELHYPALLDWFKSH--P-SPPVAILSDFFLGWTQGLAAELGLPRVVFSPSGAFALSVSFAMWTDLPTNDDP 155 (473)
Q Consensus 79 ~~~~~~~~~~~~~~~l~~~l~~~--~-~~pD~VV~D~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~p~~~~~ 155 (473)
...+.....+.+.+.+.+++++. + .+++|||+|.+++|+..+|+++|||.+.|++++++.+..+++.+...
T Consensus 78 ~~~~~~~~~~~~~~~l~~~l~~l~~~~~pv~ciV~D~~~~wa~dvA~~lgIP~~~f~t~~a~~~~~~~~~~~~~------ 151 (455)
T PLN02152 78 VQNRLVNFERNGDKALSDFIEANLNGDSPVTCLIYTILPNWAPKVARRFHLPSVLLWIQPAFVFDIYYNYSTGN------ 151 (455)
T ss_pred HHHHHHHHHHhccHHHHHHHHHhhccCCCceEEEECCccHhHHHHHHHhCCCEEEEECccHHHHHHHHHhhccC------
Confidence 22233333335567777777653 1 14599999999999999999999999999999999888876654211
Q ss_pred CCCCccccCCCCCCCCCCCccccchhhhccCCCCCchHHHHHHhhhccC--CcEEeecchHHhhHHHHHHHHHhhCCCcE
Q 042753 156 DNVDALVSFPRVPNCPVYPWYQISHLYRTLKEGDPDWDLHRSNMMANKT--SWGIVFNSFAELERVYIDHMKKEMGHDRV 233 (473)
Q Consensus 156 ~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~s~~~le~~~~~~~~~~~~~~~~ 233 (473)
.....+|+++. +..++++.++..........+.+.+....... +.++++|||++||+.+++.+.. ..+
T Consensus 152 ---~~~~~iPglp~---l~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vlvNTf~eLE~~~~~~l~~----~~v 221 (455)
T PLN02152 152 ---NSVFEFPNLPS---LEIRDLPSFLSPSNTNKAAQAVYQELMEFLKEESNPKILVNTFDSLEPEFLTAIPN----IEM 221 (455)
T ss_pred ---CCeeecCCCCC---CchHHCchhhcCCCCchhHHHHHHHHHHHhhhccCCEEEEeChHHhhHHHHHhhhc----CCE
Confidence 11345788765 66777887664321122223444444444332 4699999999999999988855 369
Q ss_pred EEeccCCCCCCcchhhccCCC--CCCCChhhhHHHhcCCCCCcEEEEEeCCcccCCHHHHHHHHHHHHhCCCcEEEEEeC
Q 042753 234 WAVGPVLPPDDDLVESMCRGG--SSSVPAHDVLTWLDSRRDESVVYVCFGSRYVLTAKQIHELAAALEKTDVDFVYCVRE 311 (473)
Q Consensus 234 ~~vGpl~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~~~~~~V~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~ 311 (473)
+.|||+.+.. ... ....+. ..+..+.++.+|||.+..+++|||||||....+.+++++++.+|+.++++|||+++.
T Consensus 222 ~~VGPL~~~~-~~~-~~~~~~~~~~~~~~~~~~~wLd~~~~~sVvyvsfGS~~~l~~~q~~ela~gL~~s~~~flWv~r~ 299 (455)
T PLN02152 222 VAVGPLLPAE-IFT-GSESGKDLSVRDQSSSYTLWLDSKTESSVIYVSFGTMVELSKKQIEELARALIEGKRPFLWVITD 299 (455)
T ss_pred EEEcccCccc-ccc-ccccCccccccccchHHHHHhhCCCCCceEEEEecccccCCHHHHHHHHHHHHHcCCCeEEEEec
Confidence 9999997532 100 000010 001223579999999888899999999999999999999999999999999999986
Q ss_pred CCccCC---cccC--CCCchhhHHhhcCCCeEeecCccHHHhhhccCccceeeccCchhHHHHHhhCCeEecCcccccch
Q 042753 312 PDERHA---SQDC--GVLPDGFEDRVAGRGYVIRGWSQQVAILRHKAVGAFLTHCGWNSVLEGVSAGVVMLTWPMDADQY 386 (473)
Q Consensus 312 ~~~~~~---~~~~--~~lp~~~~~~~~~~nv~v~~~~pq~~lL~~~~v~~~ItHgG~~s~~eal~~GvP~l~~P~~~DQ~ 386 (473)
+.-... ..+. -.+|++|.++....+ ++.+|+||.+||+|+++|+|||||||||++||+++|||||++|++.||+
T Consensus 300 ~~~~~~~~~~~~~~~~~~~~~f~e~~~~~g-~v~~W~PQ~~iL~h~~vg~fvtH~G~nS~~Ea~~~GvP~l~~P~~~DQ~ 378 (455)
T PLN02152 300 KLNREAKIEGEEETEIEKIAGFRHELEEVG-MIVSWCSQIEVLRHRAVGCFVTHCGWSSSLESLVLGVPVVAFPMWSDQP 378 (455)
T ss_pred CcccccccccccccccccchhHHHhccCCe-EEEeeCCHHHHhCCcccceEEeeCCcccHHHHHHcCCCEEeccccccch
Confidence 310000 0000 124788888876544 5569999999999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHhcceEEeccCCCCCCCHHHHHHHHHHHhCCc-HHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHH
Q 042753 387 TNAQLLVDQLGVGIRVGEGTRNIPESDELARLLAQSVDGP-RRERLKARELSGAALSAVVKGGSSDRDLNDFIKRI 461 (473)
Q Consensus 387 ~na~rv~~~~G~G~~l~~~~~~~~~~~~l~~~i~~~l~~~-~~~~~~a~~~~~~~~~~~~~~gs~~~~~~~~~~~~ 461 (473)
.||+++++.||+|+.+..++.+.++.++|+++|+++|+++ ..||++|+++++..++++..||||++++++|++++
T Consensus 379 ~na~~~~~~~~~G~~~~~~~~~~~~~e~l~~av~~vm~~~~~~~r~~a~~~~~~~~~a~~~ggsS~~nl~~li~~i 454 (455)
T PLN02152 379 ANAKLLEEIWKTGVRVRENSEGLVERGEIRRCLEAVMEEKSVELRESAEKWKRLAIEAGGEGGSSDKNVEAFVKTL 454 (455)
T ss_pred HHHHHHHHHhCceEEeecCcCCcCcHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHh
Confidence 9999999877888887532133569999999999999865 46999999999999999999999999999999986
|
|
| >PLN00164 glucosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-63 Score=495.13 Aligned_cols=444 Identities=30% Similarity=0.461 Sum_probs=338.2
Q ss_pred cEEEEEcCCCCCChHHHHHHHHHHHhCC----CeEEEEeCCCChh----hhhhhccC--CCCCCeeEEEcCCCCCCCCCC
Q 042753 6 AHILVYPFPTSGHIIPLLDLTNRLLTLG----LNVTVLITQNNLP----LLDSLNAN--HPSTSLQSLVLPQPKWPAGSP 75 (473)
Q Consensus 6 ~~Il~~~~~~~GH~~p~l~La~~L~~rG----h~Vt~~~~~~~~~----~i~~~~~~--~~~~~~~f~~l~~~~~~~~~~ 75 (473)
.||+++|+|++||++|++.||+.|+.|| +.|||++++.+.. .+...... ....+++|..+|++. +++
T Consensus 4 ~HVVlvPfpaqGHi~P~l~LAk~La~~g~~~~~~vT~~~t~~~~~~~~~~~~~~~~~~~~~~~~i~~~~lp~~~---~p~ 80 (480)
T PLN00164 4 PTVVLLPVWGSGHLMSMLEAGKRLLASSGGGALSLTVLVMPPPTPESASEVAAHVRREAASGLDIRFHHLPAVE---PPT 80 (480)
T ss_pred CEEEEeCCcchhHHHHHHHHHHHHHhCCCCCcEEEEEEEcCCCccchhHHHHHHHhhcccCCCCEEEEECCCCC---CCC
Confidence 4999999999999999999999999996 7999999886532 33332211 112258999988642 221
Q ss_pred h-hhHHHHHHHHHHHhhHHHHHHHhcCCCCCcEEEeCCCcchHHHHHHHhCCCcEEEecchHHHHHHHHhhhccCCCCCC
Q 042753 76 A-TRLLKFMRVLRELHYPALLDWFKSHPSPPVAILSDFFLGWTQGLAAELGLPRVVFSPSGAFALSVSFAMWTDLPTNDD 154 (473)
Q Consensus 76 ~-~~~~~~~~~~~~~~~~~l~~~l~~~~~~pD~VV~D~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~p~~~~ 154 (473)
. +....+...+...+.+.+.+++++...+++|||+|.+++|+..+|+++|||++.|+++++..+..+.+.....-....
T Consensus 81 ~~e~~~~~~~~~~~~~~~~l~~~L~~l~~pv~cIV~D~f~~Wa~dVA~elgIP~v~F~t~sA~~~~~~~~~~~~~~~~~~ 160 (480)
T PLN00164 81 DAAGVEEFISRYIQLHAPHVRAAIAGLSCPVAALVVDFFCTPLLDVARELAVPAYVYFTSTAAMLALMLRLPALDEEVAV 160 (480)
T ss_pred ccccHHHHHHHHHHhhhHHHHHHHHhcCCCceEEEECCcchhHHHHHHHhCCCEEEEECccHHHHHHHhhhhhhcccccC
Confidence 1 122233332333667778888877532469999999999999999999999999999999988877665321100000
Q ss_pred -CCCCCccccCCCCCCCCCCCccccchhhhccCCCCCchHHHHHHhhhccCCcEEeecchHHhhHHHHHHHHHhh-----
Q 042753 155 -PDNVDALVSFPRVPNCPVYPWYQISHLYRTLKEGDPDWDLHRSNMMANKTSWGIVFNSFAELERVYIDHMKKEM----- 228 (473)
Q Consensus 155 -~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~le~~~~~~~~~~~----- 228 (473)
......+..+|+++. +...+++.+.... .......+........+++++++|||++||+.+++.++...
T Consensus 161 ~~~~~~~~~~iPGlp~---l~~~dlp~~~~~~--~~~~~~~~~~~~~~~~~~~~vlvNTf~eLE~~~~~~~~~~~~~~~~ 235 (480)
T PLN00164 161 EFEEMEGAVDVPGLPP---VPASSLPAPVMDK--KSPNYAWFVYHGRRFMEAAGIIVNTAAELEPGVLAAIADGRCTPGR 235 (480)
T ss_pred cccccCcceecCCCCC---CChHHCCchhcCC--CcHHHHHHHHHHHhhhhcCEEEEechHHhhHHHHHHHHhccccccC
Confidence 000012345777765 6677777654322 11223344444556678899999999999999999987632
Q ss_pred -CCCcEEEeccCCCCCCcchhhccCCCCCCCChhhhHHHhcCCCCCcEEEEEeCCcccCCHHHHHHHHHHHHhCCCcEEE
Q 042753 229 -GHDRVWAVGPVLPPDDDLVESMCRGGSSSVPAHDVLTWLDSRRDESVVYVCFGSRYVLTAKQIHELAAALEKTDVDFVY 307 (473)
Q Consensus 229 -~~~~~~~vGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~V~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~ 307 (473)
. ++++.|||+.... . .+ .....++++.+|||.+..+++|||||||....+.+++.+++.+|+.++++|||
T Consensus 236 ~~-~~v~~vGPl~~~~-~------~~-~~~~~~~~~~~wLd~~~~~svvyvsfGS~~~~~~~q~~ela~gL~~s~~~flW 306 (480)
T PLN00164 236 PA-PTVYPIGPVISLA-F------TP-PAEQPPHECVRWLDAQPPASVVFLCFGSMGFFDAPQVREIAAGLERSGHRFLW 306 (480)
T ss_pred CC-CceEEeCCCcccc-c------cC-CCccchHHHHHHHHhCCCCceEEEEecccccCCHHHHHHHHHHHHHcCCCEEE
Confidence 2 4799999997532 1 00 01234578999999988899999999999889999999999999999999999
Q ss_pred EEeCCCccCC----c-ccCCCCchhhHHhhcCCCeEeecCccHHHhhhccCccceeeccCchhHHHHHhhCCeEecCccc
Q 042753 308 CVREPDERHA----S-QDCGVLPDGFEDRVAGRGYVIRGWSQQVAILRHKAVGAFLTHCGWNSVLEGVSAGVVMLTWPMD 382 (473)
Q Consensus 308 ~~~~~~~~~~----~-~~~~~lp~~~~~~~~~~nv~v~~~~pq~~lL~~~~v~~~ItHgG~~s~~eal~~GvP~l~~P~~ 382 (473)
+++.+..... + ...+.+|++|.++...+++++.+|+||.+||+|+++++|||||||||++||+++|||||++|++
T Consensus 307 v~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~g~~v~~w~PQ~~iL~h~~vg~fvtH~GwnS~~Eai~~GVP~l~~P~~ 386 (480)
T PLN00164 307 VLRGPPAAGSRHPTDADLDELLPEGFLERTKGRGLVWPTWAPQKEILAHAAVGGFVTHCGWNSVLESLWHGVPMAPWPLY 386 (480)
T ss_pred EEcCCcccccccccccchhhhCChHHHHHhcCCCeEEeecCCHHHHhcCcccCeEEeecccchHHHHHHcCCCEEeCCcc
Confidence 9985320000 0 0112488999999999999999999999999999999999999999999999999999999999
Q ss_pred ccchhhHHHHHHHhcceEEeccCC--CCCCCHHHHHHHHHHHhCCc----HHHHHHHHHHHHHHHHHHhcCCChHHHHHH
Q 042753 383 ADQYTNAQLLVDQLGVGIRVGEGT--RNIPESDELARLLAQSVDGP----RRERLKARELSGAALSAVVKGGSSDRDLND 456 (473)
Q Consensus 383 ~DQ~~na~rv~~~~G~G~~l~~~~--~~~~~~~~l~~~i~~~l~~~----~~~~~~a~~~~~~~~~~~~~~gs~~~~~~~ 456 (473)
+||+.||+++++.+|+|+.+..++ .+.+++++|.++|+++|.++ +.+|++|+++++++++++.+||||++++++
T Consensus 387 ~DQ~~Na~~~~~~~gvG~~~~~~~~~~~~~~~e~l~~av~~vm~~~~~~~~~~r~~a~~~~~~~~~a~~~gGSS~~~l~~ 466 (480)
T PLN00164 387 AEQHLNAFELVADMGVAVAMKVDRKRDNFVEAAELERAVRSLMGGGEEEGRKAREKAAEMKAACRKAVEEGGSSYAALQR 466 (480)
T ss_pred ccchhHHHHHHHHhCeEEEeccccccCCcCcHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHH
Confidence 999999999877789999986210 12479999999999999763 468999999999999999999999999999
Q ss_pred HHHHHHhhcc
Q 042753 457 FIKRINELKS 466 (473)
Q Consensus 457 ~~~~~~~~~~ 466 (473)
|++.+++.+-
T Consensus 467 ~v~~~~~~~~ 476 (480)
T PLN00164 467 LAREIRHGAV 476 (480)
T ss_pred HHHHHHhccC
Confidence 9999988643
|
|
| >PLN00414 glycosyltransferase family protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-63 Score=487.70 Aligned_cols=424 Identities=24% Similarity=0.369 Sum_probs=327.3
Q ss_pred ccEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCCCChhhhhhhccCCCCCCeeEEEcCCCCCCCCCChh-h-----
Q 042753 5 GAHILVYPFPTSGHIIPLLDLTNRLLTLGLNVTVLITQNNLPLLDSLNANHPSTSLQSLVLPQPKWPAGSPAT-R----- 78 (473)
Q Consensus 5 ~~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~i~~~~~~~~~~~~~f~~l~~~~~~~~~~~~-~----- 78 (473)
..||+++|+|++||++|++.||+.|+++|++|||++++.+...+..... ..++++|..++++..+++++.. .
T Consensus 4 ~~HVvlvPfpaqGHi~PmL~LAk~Las~G~~VT~vtt~~~~~~i~~~~~--~~~~i~~~~i~lP~~dGLP~g~e~~~~l~ 81 (446)
T PLN00414 4 KFHAFMYPWFGFGHMIPYLHLANKLAEKGHRVTFFLPKKAHKQLQPLNL--FPDSIVFEPLTLPPVDGLPFGAETASDLP 81 (446)
T ss_pred CCEEEEecCcccchHHHHHHHHHHHHhCCCEEEEEeCCchhhhhccccc--CCCceEEEEecCCCcCCCCCcccccccch
Confidence 3699999999999999999999999999999999999988766654321 1125888777665445665431 1
Q ss_pred ---HHHHHHHHHHHhhHHHHHHHhcCCCCCcEEEeCCCcchHHHHHHHhCCCcEEEecchHHHHHHHHhhhccCCCCCCC
Q 042753 79 ---LLKFMRVLRELHYPALLDWFKSHPSPPVAILSDFFLGWTQGLAAELGLPRVVFSPSGAFALSVSFAMWTDLPTNDDP 155 (473)
Q Consensus 79 ---~~~~~~~~~~~~~~~l~~~l~~~~~~pD~VV~D~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~p~~~~~ 155 (473)
...+..... .+.+.+.++++.. +|||||+|. ++|+..+|+++|||++.|++++++.+..+.+... ..
T Consensus 82 ~~~~~~~~~a~~-~l~~~l~~~L~~~--~p~cVV~D~-~~wa~~vA~~lgIP~~~F~~~~a~~~~~~~~~~~------~~ 151 (446)
T PLN00414 82 NSTKKPIFDAMD-LLRDQIEAKVRAL--KPDLIFFDF-VHWVPEMAKEFGIKSVNYQIISAACVAMVLAPRA------EL 151 (446)
T ss_pred hhHHHHHHHHHH-HHHHHHHHHHhcC--CCeEEEECC-chhHHHHHHHhCCCEEEEecHHHHHHHHHhCcHh------hc
Confidence 112334444 6677888888877 899999995 7899999999999999999999988777654211 00
Q ss_pred CCCCccccCCCCCCC-CCCCcccc--chhhhccCCCCCchHHHHHHhhhccCCcEEeecchHHhhHHHHHHHHHhhCCCc
Q 042753 156 DNVDALVSFPRVPNC-PVYPWYQI--SHLYRTLKEGDPDWDLHRSNMMANKTSWGIVFNSFAELERVYIDHMKKEMGHDR 232 (473)
Q Consensus 156 ~~~~~~~~~p~l~~~-~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~le~~~~~~~~~~~~~~~ 232 (473)
...+|+++.. +.+...+. +.++.. ....+.+......+++++++|||++||+.+++.+...++ ++
T Consensus 152 -----~~~~pg~p~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~vlvNTf~eLE~~~~~~~~~~~~-~~ 219 (446)
T PLN00414 152 -----GFPPPDYPLSKVALRGHDANVCSLFAN------SHELFGLITKGLKNCDVVSIRTCVELEGNLCDFIERQCQ-RK 219 (446)
T ss_pred -----CCCCCCCCCCcCcCchhhcccchhhcc------cHHHHHHHHHhhccCCEEEEechHHHHHHHHHHHHHhcC-CC
Confidence 0124566531 11222221 122210 123444555667778999999999999999999987665 68
Q ss_pred EEEeccCCCCCCcchhhccCCCCCCCChhhhHHHhcCCCCCcEEEEEeCCcccCCHHHHHHHHHHHHhCCCcEEEEEeCC
Q 042753 233 VWAVGPVLPPDDDLVESMCRGGSSSVPAHDVLTWLDSRRDESVVYVCFGSRYVLTAKQIHELAAALEKTDVDFVYCVREP 312 (473)
Q Consensus 233 ~~~vGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~V~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~ 312 (473)
++.|||+.... . ...+ ....+++.+|||.+..++||||||||......+++.++..+|+.++.+|+|++..+
T Consensus 220 v~~VGPl~~~~-~----~~~~---~~~~~~~~~WLD~q~~~sVvyvsfGS~~~~~~~q~~e~a~gL~~s~~~Flwvvr~~ 291 (446)
T PLN00414 220 VLLTGPMLPEP-Q----NKSG---KPLEDRWNHWLNGFEPGSVVFCAFGTQFFFEKDQFQEFCLGMELTGLPFLIAVMPP 291 (446)
T ss_pred eEEEcccCCCc-c----cccC---cccHHHHHHHHhcCCCCceEEEeecccccCCHHHHHHHHHHHHHcCCCeEEEEecC
Confidence 99999997543 2 0001 12335799999999999999999999999999999999999999999999999864
Q ss_pred CccCCcccCCCCchhhHHhhcCCCeEeecCccHHHhhhccCccceeeccCchhHHHHHhhCCeEecCcccccchhhHHHH
Q 042753 313 DERHASQDCGVLPDGFEDRVAGRGYVIRGWSQQVAILRHKAVGAFLTHCGWNSVLEGVSAGVVMLTWPMDADQYTNAQLL 392 (473)
Q Consensus 313 ~~~~~~~~~~~lp~~~~~~~~~~nv~v~~~~pq~~lL~~~~v~~~ItHgG~~s~~eal~~GvP~l~~P~~~DQ~~na~rv 392 (473)
... ....+.+|++|.+++..+++++.+|+||.+||+|+++++|||||||||++||+++|||||++|++.||+.||+++
T Consensus 292 ~~~--~~~~~~lp~~f~~r~~~~g~vv~~w~PQ~~vL~h~~v~~fvtH~G~nS~~Ea~~~GvP~l~~P~~~dQ~~na~~~ 369 (446)
T PLN00414 292 KGS--STVQEALPEGFEERVKGRGIVWEGWVEQPLILSHPSVGCFVNHCGFGSMWESLVSDCQIVFIPQLADQVLITRLL 369 (446)
T ss_pred CCc--ccchhhCChhHHHHhcCCCeEEeccCCHHHHhcCCccceEEecCchhHHHHHHHcCCCEEecCcccchHHHHHHH
Confidence 200 011246999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhcceEEeccCCCCCCCHHHHHHHHHHHhCCc----HHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHhhcc
Q 042753 393 VDQLGVGIRVGEGTRNIPESDELARLLAQSVDGP----RRERLKARELSGAALSAVVKGGSSDRDLNDFIKRINELKS 466 (473)
Q Consensus 393 ~~~~G~G~~l~~~~~~~~~~~~l~~~i~~~l~~~----~~~~~~a~~~~~~~~~~~~~~gs~~~~~~~~~~~~~~~~~ 466 (473)
++.+|+|+.+.+++.+.+++++|+++++++|.++ +.+|++|+++++.+. ++|||+ ..+++|++++++...
T Consensus 370 ~~~~g~g~~~~~~~~~~~~~~~i~~~v~~~m~~~~e~g~~~r~~a~~~~~~~~---~~gg~s-s~l~~~v~~~~~~~~ 443 (446)
T PLN00414 370 TEELEVSVKVQREDSGWFSKESLRDTVKSVMDKDSEIGNLVKRNHKKLKETLV---SPGLLS-GYADKFVEALENEVN 443 (446)
T ss_pred HHHhCeEEEeccccCCccCHHHHHHHHHHHhcCChhhHHHHHHHHHHHHHHHH---cCCCcH-HHHHHHHHHHHHhcc
Confidence 8778999999731112589999999999999764 359999999999974 556633 448999999977654
|
|
| >PLN02554 UDP-glycosyltransferase family protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-62 Score=493.41 Aligned_cols=443 Identities=26% Similarity=0.431 Sum_probs=328.1
Q ss_pred cEEEEEcCCCCCChHHHHHHHHHHHhCC--CeEEEEeCCCChhhhh---hhccC---CCCCCeeEEEcCCCCCCCCCChh
Q 042753 6 AHILVYPFPTSGHIIPLLDLTNRLLTLG--LNVTVLITQNNLPLLD---SLNAN---HPSTSLQSLVLPQPKWPAGSPAT 77 (473)
Q Consensus 6 ~~Il~~~~~~~GH~~p~l~La~~L~~rG--h~Vt~~~~~~~~~~i~---~~~~~---~~~~~~~f~~l~~~~~~~~~~~~ 77 (473)
+||+++|+|++||++|++.||+.|+.|| ..|||++++.+...+. ..... ...++++|..+|++...... ..
T Consensus 3 ~hvvl~P~paqGHi~P~l~LAk~La~~G~~~~vT~v~t~~~~~~~~~~~~~~~~~~~~~~~~i~~~~lp~~~~~~~~-~~ 81 (481)
T PLN02554 3 IELVFIPSPGIGHLRPTVELAKLLVDSDDRLSITVIIIPSRSGDDASSSAYIASLSASSEDRLRYEVISAGDQPTTE-DP 81 (481)
T ss_pred eEEEEeCCcchhhHHHHHHHHHHHHhCCCCEEEEEEeCCCccchhhhhhhhhhhcccCCCCCeEEEEcCCCCCCccc-ch
Confidence 6899999999999999999999999998 8899999987754321 11110 01235999998865321100 11
Q ss_pred hHHHHHHHHHHHhhHHHHHHHhcC---CCCC-cEEEeCCCcchHHHHHHHhCCCcEEEecchHHHHHHHHhhhccCCC--
Q 042753 78 RLLKFMRVLRELHYPALLDWFKSH---PSPP-VAILSDFFLGWTQGLAAELGLPRVVFSPSGAFALSVSFAMWTDLPT-- 151 (473)
Q Consensus 78 ~~~~~~~~~~~~~~~~l~~~l~~~---~~~p-D~VV~D~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~p~-- 151 (473)
.+..+...+...+.+.+.+++.+. +.+| +|||+|.+++|+..+|+++|||++.|++++++.++.+.+.......
T Consensus 82 ~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~pv~cvV~D~f~~wa~dvA~~lgIP~~~F~t~sa~~~~~~~~~~~~~~~~~ 161 (481)
T PLN02554 82 TFQSYIDNQKPKVRDAVAKLVDDSSTPSSPRLAGFVVDMFCTSMIDVANEFGVPSYMFYTSNATFLGLQLHVQMLYDEKK 161 (481)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEECCcchhHHHHHHHhCCCEEEEeCCcHHHHHHHHhhhhhccccc
Confidence 222233333334455666665431 1133 8999999999999999999999999999999988887765432100
Q ss_pred C--CCCCCCCccccCCCCCCCCCCCccccchhhhccCCCCCchHHHHHHhhhccCCcEEeecchHHhhHHHHHHHHHh--
Q 042753 152 N--DDPDNVDALVSFPRVPNCPVYPWYQISHLYRTLKEGDPDWDLHRSNMMANKTSWGIVFNSFAELERVYIDHMKKE-- 227 (473)
Q Consensus 152 ~--~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~le~~~~~~~~~~-- 227 (473)
. ........+..+|+++. .++..+++..... ......+.+......+++++++|||.+||+.+.+.+.+.
T Consensus 162 ~~~~~~~~~~~~v~iPgl~~--pl~~~dlp~~~~~----~~~~~~~~~~~~~~~~~~gvlvNt~~eLe~~~~~~l~~~~~ 235 (481)
T PLN02554 162 YDVSELEDSEVELDVPSLTR--PYPVKCLPSVLLS----KEWLPLFLAQARRFREMKGILVNTVAELEPQALKFFSGSSG 235 (481)
T ss_pred cCccccCCCCceeECCCCCC--CCCHHHCCCcccC----HHHHHHHHHHHHhcccCCEEEEechHHHhHHHHHHHHhccc
Confidence 0 01111112345777632 1555566654421 122445555666778899999999999999999888763
Q ss_pred hCCCcEEEeccCCCCCCcchhhccCCCCCCCChhhhHHHhcCCCCCcEEEEEeCCcccCCHHHHHHHHHHHHhCCCcEEE
Q 042753 228 MGHDRVWAVGPVLPPDDDLVESMCRGGSSSVPAHDVLTWLDSRRDESVVYVCFGSRYVLTAKQIHELAAALEKTDVDFVY 307 (473)
Q Consensus 228 ~~~~~~~~vGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~V~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~ 307 (473)
.. |+++.|||+.....+ .. + .....++++.+|++.++.+++|||||||....+.+++++++.+|++++++|||
T Consensus 236 ~~-~~v~~vGpl~~~~~~----~~-~-~~~~~~~~~~~wLd~~~~~svvyvsfGS~~~~~~~~~~~la~~l~~~~~~flW 308 (481)
T PLN02554 236 DL-PPVYPVGPVLHLENS----GD-D-SKDEKQSEILRWLDEQPPKSVVFLCFGSMGGFSEEQAREIAIALERSGHRFLW 308 (481)
T ss_pred CC-CCEEEeCCCcccccc----cc-c-cccccchHHHHHHhcCCCCcEEEEeccccccCCHHHHHHHHHHHHHcCCCeEE
Confidence 23 589999999533201 00 0 00224568999999987889999999999889999999999999999999999
Q ss_pred EEeCCCcc-------CCcccCCCCchhhHHhhcCCCeEeecCccHHHhhhccCccceeeccCchhHHHHHhhCCeEecCc
Q 042753 308 CVREPDER-------HASQDCGVLPDGFEDRVAGRGYVIRGWSQQVAILRHKAVGAFLTHCGWNSVLEGVSAGVVMLTWP 380 (473)
Q Consensus 308 ~~~~~~~~-------~~~~~~~~lp~~~~~~~~~~nv~v~~~~pq~~lL~~~~v~~~ItHgG~~s~~eal~~GvP~l~~P 380 (473)
+++.+... ......+.+|++|.++....+ ++.+|+||.+||+|+++++|||||||||++||+++|||||++|
T Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~r~~~~g-~v~~W~PQ~~iL~H~~v~~FvtH~G~nS~~Ea~~~GVP~l~~P 387 (481)
T PLN02554 309 SLRRASPNIMKEPPGEFTNLEEILPEGFLDRTKDIG-KVIGWAPQVAVLAKPAIGGFVTHCGWNSILESLWFGVPMAAWP 387 (481)
T ss_pred EEcCCcccccccccccccchhhhCChHHHHHhccCc-eEEeeCCHHHHhCCcccCcccccCccchHHHHHHcCCCEEecC
Confidence 99763100 000001236899998886544 5569999999999999999999999999999999999999999
Q ss_pred ccccchhhHHHHHHHhcceEEeccC--------CCCCCCHHHHHHHHHHHhC-CcHHHHHHHHHHHHHHHHHHhcCCChH
Q 042753 381 MDADQYTNAQLLVDQLGVGIRVGEG--------TRNIPESDELARLLAQSVD-GPRRERLKARELSGAALSAVVKGGSSD 451 (473)
Q Consensus 381 ~~~DQ~~na~rv~~~~G~G~~l~~~--------~~~~~~~~~l~~~i~~~l~-~~~~~~~~a~~~~~~~~~~~~~~gs~~ 451 (473)
+++||+.||+++.+.+|+|+.+++. +...+++++|+++|+++|+ |+ +||+||+++++.+++++.+||||+
T Consensus 388 ~~~DQ~~Na~~~v~~~g~Gv~l~~~~~~~~~~~~~~~~~~e~l~~av~~vm~~~~-~~r~~a~~l~~~~~~av~~gGss~ 466 (481)
T PLN02554 388 LYAEQKFNAFEMVEELGLAVEIRKYWRGDLLAGEMETVTAEEIERGIRCLMEQDS-DVRKRVKEMSEKCHVALMDGGSSH 466 (481)
T ss_pred ccccchhhHHHHHHHhCceEEeeccccccccccccCeEcHHHHHHHHHHHhcCCH-HHHHHHHHHHHHHHHHhcCCChHH
Confidence 9999999996654478999998620 1246899999999999997 65 999999999999999999999999
Q ss_pred HHHHHHHHHHHhh
Q 042753 452 RDLNDFIKRINEL 464 (473)
Q Consensus 452 ~~~~~~~~~~~~~ 464 (473)
+++++|+++++++
T Consensus 467 ~~l~~lv~~~~~~ 479 (481)
T PLN02554 467 TALKKFIQDVTKN 479 (481)
T ss_pred HHHHHHHHHHHhh
Confidence 9999999999875
|
|
| >PLN02448 UDP-glycosyltransferase family protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-62 Score=487.99 Aligned_cols=435 Identities=26% Similarity=0.424 Sum_probs=329.5
Q ss_pred ccEEEEEcCCCCCChHHHHHHHHHHHhC--CCeEEEEeCCCChhhhhhhccCCCCCCeeEEEcCCCCCCCCCChhhHHHH
Q 042753 5 GAHILVYPFPTSGHIIPLLDLTNRLLTL--GLNVTVLITQNNLPLLDSLNANHPSTSLQSLVLPQPKWPAGSPATRLLKF 82 (473)
Q Consensus 5 ~~~Il~~~~~~~GH~~p~l~La~~L~~r--Gh~Vt~~~~~~~~~~i~~~~~~~~~~~~~f~~l~~~~~~~~~~~~~~~~~ 82 (473)
..||+++|+|++||++|++.||++|+.| ||+|||++++.+...++.... .++++|..+|....++.........+
T Consensus 10 ~~hVvlvp~pa~GHi~P~l~LA~~L~~~~~G~~VT~~~t~~~~~~i~~~~~---~~gi~fv~lp~~~p~~~~~~~~~~~~ 86 (459)
T PLN02448 10 SCHVVAMPYPGRGHINPMMNLCKLLASRKPDILITFVVTEEWLGLIGSDPK---PDNIRFATIPNVIPSELVRAADFPGF 86 (459)
T ss_pred CcEEEEECCcccccHHHHHHHHHHHHcCCCCcEEEEEeCCchHhHhhccCC---CCCEEEEECCCCCCCccccccCHHHH
Confidence 6899999999999999999999999999 999999999998877766421 23699998884211111111223333
Q ss_pred HHHHHHHhhHHHHHHHhcCCCCCcEEEeCCCcchHHHHHHHhCCCcEEEecchHHHHHHHHhhhccC-----CCCCCCC-
Q 042753 83 MRVLRELHYPALLDWFKSHPSPPVAILSDFFLGWTQGLAAELGLPRVVFSPSGAFALSVSFAMWTDL-----PTNDDPD- 156 (473)
Q Consensus 83 ~~~~~~~~~~~l~~~l~~~~~~pD~VV~D~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~-----p~~~~~~- 156 (473)
...+.+...+.+.+++++...++||||+|.+++|+..+|+++|||+|.++++++..++.+.+..... |. ....
T Consensus 87 ~~~~~~~~~~~~~~~l~~~~~~~~~VI~D~~~~wa~~vA~~lgIP~v~f~~~~a~~~~~~~~~~~~~~~~~~~~-~~~~~ 165 (459)
T PLN02448 87 LEAVMTKMEAPFEQLLDRLEPPVTAIVADTYLFWAVGVGNRRNIPVASLWTMSATFFSVFYHFDLLPQNGHFPV-ELSES 165 (459)
T ss_pred HHHHHHHhHHHHHHHHHhcCCCcEEEEECCccHHHHHHHHHhCCCeEEEEhHHHHHHHHHHHhhhhhhccCCCC-ccccc
Confidence 3443334566777777764226799999999999999999999999999999997777655543211 11 0000
Q ss_pred CCCccccCCCCCCCCCCCccccchhhhccCCCCCchHHHHHHhhhccCCcEEeecchHHhhHHHHHHHHHhhCCCcEEEe
Q 042753 157 NVDALVSFPRVPNCPVYPWYQISHLYRTLKEGDPDWDLHRSNMMANKTSWGIVFNSFAELERVYIDHMKKEMGHDRVWAV 236 (473)
Q Consensus 157 ~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~le~~~~~~~~~~~~~~~~~~v 236 (473)
.+.....+|+++. +...+++.++... .....+.+.+......++.++++|||++||+.+++.+...++ ++++.|
T Consensus 166 ~~~~~~~iPg~~~---l~~~dlp~~~~~~--~~~~~~~~~~~~~~~~~~~~vlvNTf~eLE~~~~~~l~~~~~-~~~~~i 239 (459)
T PLN02448 166 GEERVDYIPGLSS---TRLSDLPPIFHGN--SRRVLKRILEAFSWVPKAQYLLFTSFYELEAQAIDALKSKFP-FPVYPI 239 (459)
T ss_pred cCCccccCCCCCC---CChHHCchhhcCC--chHHHHHHHHHHhhcccCCEEEEccHHHhhHHHHHHHHhhcC-CceEEe
Confidence 0000113566553 5566666654322 222234455555566677899999999999999999987666 689999
Q ss_pred ccCCCCCCcchhhccCCCCCCCChhhhHHHhcCCCCCcEEEEEeCCcccCCHHHHHHHHHHHHhCCCcEEEEEeCCCccC
Q 042753 237 GPVLPPDDDLVESMCRGGSSSVPAHDVLTWLDSRRDESVVYVCFGSRYVLTAKQIHELAAALEKTDVDFVYCVREPDERH 316 (473)
Q Consensus 237 Gpl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~V~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~ 316 (473)
||+.+.. ...+ ...+......+.++.+|++.+..+++|||||||....+.+++++++.+|++.+++|||+++.+.
T Consensus 240 GP~~~~~-~~~~-~~~~~~~~~~~~~~~~wl~~~~~~~vvyvsfGs~~~~~~~~~~~~~~~l~~~~~~~lw~~~~~~--- 314 (459)
T PLN02448 240 GPSIPYM-ELKD-NSSSSNNEDNEPDYFQWLDSQPEGSVLYVSLGSFLSVSSAQMDEIAAGLRDSGVRFLWVARGEA--- 314 (459)
T ss_pred cCccccc-ccCC-CccccccccchhHHHHHHcCCCCCceEEEeecccccCCHHHHHHHHHHHHhCCCCEEEEEcCch---
Confidence 9997643 1000 0000000112347999999988899999999999888899999999999999999999887531
Q ss_pred CcccCCCCchhhHHhhcCCCeEeecCccHHHhhhccCccceeeccCchhHHHHHhhCCeEecCcccccchhhHHHHHHHh
Q 042753 317 ASQDCGVLPDGFEDRVAGRGYVIRGWSQQVAILRHKAVGAFLTHCGWNSVLEGVSAGVVMLTWPMDADQYTNAQLLVDQL 396 (473)
Q Consensus 317 ~~~~~~~lp~~~~~~~~~~nv~v~~~~pq~~lL~~~~v~~~ItHgG~~s~~eal~~GvP~l~~P~~~DQ~~na~rv~~~~ 396 (473)
.++.++.. .|+++.+|+||.+||+|+++++|||||||||++||+++|||||++|++.||+.||+++++.|
T Consensus 315 ---------~~~~~~~~-~~~~v~~w~pQ~~iL~h~~v~~fvtHgG~nS~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~ 384 (459)
T PLN02448 315 ---------SRLKEICG-DMGLVVPWCDQLKVLCHSSVGGFWTHCGWNSTLEAVFAGVPMLTFPLFWDQPLNSKLIVEDW 384 (459)
T ss_pred ---------hhHhHhcc-CCEEEeccCCHHHHhccCccceEEecCchhHHHHHHHcCCCEEeccccccchhhHHHHHHHh
Confidence 23333332 46677799999999999999999999999999999999999999999999999999999778
Q ss_pred cceEEeccC--CCCCCCHHHHHHHHHHHhCCc----HHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHhh
Q 042753 397 GVGIRVGEG--TRNIPESDELARLLAQSVDGP----RRERLKARELSGAALSAVVKGGSSDRDLNDFIKRINEL 464 (473)
Q Consensus 397 G~G~~l~~~--~~~~~~~~~l~~~i~~~l~~~----~~~~~~a~~~~~~~~~~~~~~gs~~~~~~~~~~~~~~~ 464 (473)
|+|+.+..+ +...+++++|+++|+++|+++ ++||++|+++++++++++.+||||++++++|++++++.
T Consensus 385 g~G~~~~~~~~~~~~~~~~~l~~av~~vl~~~~~~~~~~r~~a~~~~~~~~~a~~~gGss~~~l~~~v~~~~~~ 458 (459)
T PLN02448 385 KIGWRVKREVGEETLVGREEIAELVKRFMDLESEEGKEMRRRAKELQEICRGAIAKGGSSDTNLDAFIRDISQG 458 (459)
T ss_pred CceEEEecccccCCcCcHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHhcc
Confidence 999998621 123579999999999999752 58999999999999999999999999999999999864
|
|
| >PLN02167 UDP-glycosyltransferase family protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-61 Score=482.51 Aligned_cols=444 Identities=30% Similarity=0.471 Sum_probs=320.0
Q ss_pred cEEEEEcCCCCCChHHHHHHHHHHHhCCC---eEEEEeCCCChh-hhhhhcc--CCCCCCeeEEEcCCCCCC-CC---C-
Q 042753 6 AHILVYPFPTSGHIIPLLDLTNRLLTLGL---NVTVLITQNNLP-LLDSLNA--NHPSTSLQSLVLPQPKWP-AG---S- 74 (473)
Q Consensus 6 ~~Il~~~~~~~GH~~p~l~La~~L~~rGh---~Vt~~~~~~~~~-~i~~~~~--~~~~~~~~f~~l~~~~~~-~~---~- 74 (473)
.||+++|+|++||++|++.||+.|+.||. .||+++++.+.. .....+. ....++++|..+|++... +. .
T Consensus 4 ~hVv~~PfpaqGHi~P~l~LAk~La~~G~~~t~vt~~~t~~~~~~~~~~~~~~~~~~~~~i~~~~lp~~~~p~~~~~~~~ 83 (475)
T PLN02167 4 AELIFVPFPSTGHILVTIEFAKRLINLDRRIHTITILYWSLPFAPQADAFLKSLIASEPRIRLVTLPEVQDPPPMELFVK 83 (475)
T ss_pred cEEEEeCChhhhhHHHHHHHHHHHHhCCCCeEEEEEEECCCCcchhhhHHHhhcccCCCCeEEEECCCCCCCcccccccc
Confidence 59999999999999999999999999983 567777553321 1111110 011236999999865311 00 0
Q ss_pred -ChhhHHHHHHHHHHHhhHHHHHHHhcC---CC-CCcEEEeCCCcchHHHHHHHhCCCcEEEecchHHHHHHHHhhhcc-
Q 042753 75 -PATRLLKFMRVLRELHYPALLDWFKSH---PS-PPVAILSDFFLGWTQGLAAELGLPRVVFSPSGAFALSVSFAMWTD- 148 (473)
Q Consensus 75 -~~~~~~~~~~~~~~~~~~~l~~~l~~~---~~-~pD~VV~D~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~- 148 (473)
....+..+...+...+.+.+.+++.+. .. +++|||+|.+++|+..+|+++|||.+.|++++++.++.+.+....
T Consensus 84 ~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~pv~cvV~D~f~~Wa~dVA~elgIP~v~F~t~~A~~~~~~~~~~~~~ 163 (475)
T PLN02167 84 ASEAYILEFVKKMVPLVRDALSTLVSSRDESDSVRVAGLVLDFFCVPLIDVGNEFNLPSYIFLTCNAGFLGMMKYLPERH 163 (475)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCCeEEEEECCccHHHHHHHHHhCCCEEEEECccHHHHHHHHHHHHhc
Confidence 001112222222222333444443321 01 349999999999999999999999999999999888776654321
Q ss_pred CCCCC-C--CCCCCccccCCCCCCCCCCCccccchhhhccCCCCCchHHHHHHhhhccCCcEEeecchHHhhHHHHHHHH
Q 042753 149 LPTND-D--PDNVDALVSFPRVPNCPVYPWYQISHLYRTLKEGDPDWDLHRSNMMANKTSWGIVFNSFAELERVYIDHMK 225 (473)
Q Consensus 149 ~p~~~-~--~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~le~~~~~~~~ 225 (473)
.+. . . ....+.+..+|+++.. +...+++.+.... ...+.+.+......+++++++|||++||+.+++.+.
T Consensus 164 ~~~-~~~~~~~~~~~~~~iPgl~~~--l~~~dlp~~~~~~----~~~~~~~~~~~~~~~a~~vlvNTf~eLE~~~~~~l~ 236 (475)
T PLN02167 164 RKT-ASEFDLSSGEEELPIPGFVNS--VPTKVLPPGLFMK----ESYEAWVEIAERFPEAKGILVNSFTELEPNAFDYFS 236 (475)
T ss_pred ccc-ccccccCCCCCeeECCCCCCC--CChhhCchhhhCc----chHHHHHHHHHhhcccCEeeeccHHHHHHHHHHHHH
Confidence 011 0 0 0011133457887421 4555665543321 123344455566778899999999999999999986
Q ss_pred HhhC-CCcEEEeccCCCCCCcchhhccCCCCCCCChhhhHHHhcCCCCCcEEEEEeCCcccCCHHHHHHHHHHHHhCCCc
Q 042753 226 KEMG-HDRVWAVGPVLPPDDDLVESMCRGGSSSVPAHDVLTWLDSRRDESVVYVCFGSRYVLTAKQIHELAAALEKTDVD 304 (473)
Q Consensus 226 ~~~~-~~~~~~vGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~V~vs~Gs~~~~~~~~~~~~~~al~~~~~~ 304 (473)
.... .|+++.|||+.... . ....+ .....++++.+|++.++.+++|||||||....+.+++.+++.+|+.++++
T Consensus 237 ~~~~~~p~v~~vGpl~~~~-~---~~~~~-~~~~~~~~~~~wld~~~~~svvyvsfGS~~~~~~~~~~ela~~l~~~~~~ 311 (475)
T PLN02167 237 RLPENYPPVYPVGPILSLK-D---RTSPN-LDSSDRDRIMRWLDDQPESSVVFLCFGSLGSLPAPQIKEIAQALELVGCR 311 (475)
T ss_pred hhcccCCeeEEeccccccc-c---ccCCC-CCcchhHHHHHHHhcCCCCceEEEeecccccCCHHHHHHHHHHHHhCCCc
Confidence 5311 14799999997643 1 00001 00123367999999988889999999999888999999999999999999
Q ss_pred EEEEEeCCCccCCcccCCCCchhhHHhhcCCCeEeecCccHHHhhhccCccceeeccCchhHHHHHhhCCeEecCccccc
Q 042753 305 FVYCVREPDERHASQDCGVLPDGFEDRVAGRGYVIRGWSQQVAILRHKAVGAFLTHCGWNSVLEGVSAGVVMLTWPMDAD 384 (473)
Q Consensus 305 ~i~~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~v~~~~pq~~lL~~~~v~~~ItHgG~~s~~eal~~GvP~l~~P~~~D 384 (473)
|||+++.+... .....+.+|++|.+++..+++ +.+|+||.+||+|+++++|||||||||++||+++|||||++|+++|
T Consensus 312 flw~~~~~~~~-~~~~~~~lp~~~~er~~~rg~-v~~w~PQ~~iL~h~~vg~fvtH~G~nS~~Eal~~GvP~l~~P~~~D 389 (475)
T PLN02167 312 FLWSIRTNPAE-YASPYEPLPEGFMDRVMGRGL-VCGWAPQVEILAHKAIGGFVSHCGWNSVLESLWFGVPIATWPMYAE 389 (475)
T ss_pred EEEEEecCccc-ccchhhhCChHHHHHhccCee-eeccCCHHHHhcCcccCeEEeeCCcccHHHHHHcCCCEEecccccc
Confidence 99999854200 000113489999998877664 4599999999999999999999999999999999999999999999
Q ss_pred chhhHHHHHHHhcceEEeccC---C-CCCCCHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHH
Q 042753 385 QYTNAQLLVDQLGVGIRVGEG---T-RNIPESDELARLLAQSVDGPRRERLKARELSGAALSAVVKGGSSDRDLNDFIKR 460 (473)
Q Consensus 385 Q~~na~rv~~~~G~G~~l~~~---~-~~~~~~~~l~~~i~~~l~~~~~~~~~a~~~~~~~~~~~~~~gs~~~~~~~~~~~ 460 (473)
|+.||+++.+.+|+|+.+..+ + ...+++++|.++|+++|.+++.|+++|+++++.+++++.+||||++++++|+++
T Consensus 390 Q~~na~~~~~~~g~g~~~~~~~~~~~~~~~~~~~l~~av~~~m~~~~~~r~~a~~~~~~~~~av~~gGsS~~~l~~~v~~ 469 (475)
T PLN02167 390 QQLNAFTMVKELGLAVELRLDYVSAYGEIVKADEIAGAVRSLMDGEDVPRKKVKEIAEAARKAVMDGGSSFVAVKRFIDD 469 (475)
T ss_pred chhhHHHHHHHhCeeEEeecccccccCCcccHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHhCCCcHHHHHHHHHHH
Confidence 999998765578999998631 0 135799999999999997544899999999999999999999999999999999
Q ss_pred HHh
Q 042753 461 INE 463 (473)
Q Consensus 461 ~~~ 463 (473)
+++
T Consensus 470 i~~ 472 (475)
T PLN02167 470 LLG 472 (475)
T ss_pred HHh
Confidence 876
|
|
| >PHA03392 egt ecdysteroid UDP-glucosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.8e-51 Score=408.03 Aligned_cols=410 Identities=17% Similarity=0.189 Sum_probs=280.6
Q ss_pred CccEEEEE-cCCCCCChHHHHHHHHHHHhCCCeEEEEeCCCChhhhhhhccCCCCCCeeEEEcCCCCCC------C---C
Q 042753 4 AGAHILVY-PFPTSGHIIPLLDLTNRLLTLGLNVTVLITQNNLPLLDSLNANHPSTSLQSLVLPQPKWP------A---G 73 (473)
Q Consensus 4 ~~~~Il~~-~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~i~~~~~~~~~~~~~f~~l~~~~~~------~---~ 73 (473)
..+||+.+ |.++.+|+.-+.+|+++|++|||+||++++.... ..... ...+++.+.++..... . .
T Consensus 19 ~~~kIl~~~P~~~~SH~~~~~~l~~~La~rGH~VTvi~p~~~~-~~~~~----~~~~~~~i~~~~~~~~~~~~~~~~~~~ 93 (507)
T PHA03392 19 RAARILAVFPTPAYSHHSVFKVYVEALAERGHNVTVIKPTLRV-YYASH----LCGNITEIDASLSVEYFKKLVKSSAVF 93 (507)
T ss_pred CcccEEEEcCCCCCcHHHHHHHHHHHHHHcCCeEEEEeccccc-ccccC----CCCCEEEEEcCCChHHHHHHHhhhhHH
Confidence 36789855 8899999999999999999999999999875321 11100 0124555554321100 0 0
Q ss_pred CC------h-h----hHHHHHHHHHHHh-hHHHHHHHh--cCCCCCcEEEeCCCcchHHHHHHHh-CCCcEEEecchHHH
Q 042753 74 SP------A-T----RLLKFMRVLRELH-YPALLDWFK--SHPSPPVAILSDFFLGWTQGLAAEL-GLPRVVFSPSGAFA 138 (473)
Q Consensus 74 ~~------~-~----~~~~~~~~~~~~~-~~~l~~~l~--~~~~~pD~VV~D~~~~~~~~~A~~~-giP~v~~~~~~~~~ 138 (473)
.. . . ....+...+...+ .+.+.++|+ +. ++|+||+|.+..|++.+|+.+ ++|.|.++++....
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~L~~~~~--kFDlvi~e~~~~c~~~la~~~~~~p~i~~ss~~~~~ 171 (507)
T PHA03392 94 RKRGVVADSSTVTADNYMGLVRMISDQFDLPNVKNLIANKNN--KFDLLVTEAFLDYPLVFSHLFGDAPVIQISSGYGLA 171 (507)
T ss_pred HhhhhhhhHHHHHHHHHHHHHHHHHHHHCCHHHHHHHhcCCC--ceeEEEecccchhHHHHHHHhCCCCEEEEcCCCCch
Confidence 00 0 0 0011122233222 566788887 55 899999998888999999999 99998888765543
Q ss_pred HHHHHhhhccCCCCCCCCCCCccccCCCC----CCCCCCCccccchhhhc------cCCCCCchHHHHHHh--------h
Q 042753 139 LSVSFAMWTDLPTNDDPDNVDALVSFPRV----PNCPVYPWYQISHLYRT------LKEGDPDWDLHRSNM--------M 200 (473)
Q Consensus 139 ~~~~~~~~~~~p~~~~~~~~~~~~~~p~l----~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~--------~ 200 (473)
.... .....|. .+.++|.+ ...+++..|....+... ........++..+.. .
T Consensus 172 ~~~~--~~gg~p~--------~~syvP~~~~~~~~~Msf~~R~~N~~~~~~~~~~~~~~~~~~~~l~~~~f~~~~~~~~~ 241 (507)
T PHA03392 172 ENFE--TMGAVSR--------HPVYYPNLWRSKFGNLNVWETINEIYTELRLYNEFSLLADEQNKLLKQQFGPDTPTIRE 241 (507)
T ss_pred hHHH--hhccCCC--------CCeeeCCcccCCCCCCCHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHcCCCCCCHHH
Confidence 2221 1111111 23445543 33344433322211100 000000111112221 1
Q ss_pred hccCCcEEeecchHHhhHHHHHHHHHhhCCCcEEEeccCCCCCCcchhhccCCCCCCCChhhhHHHhcCCCCCcEEEEEe
Q 042753 201 ANKTSWGIVFNSFAELERVYIDHMKKEMGHDRVWAVGPVLPPDDDLVESMCRGGSSSVPAHDVLTWLDSRRDESVVYVCF 280 (473)
Q Consensus 201 ~~~~~~~~~~~s~~~le~~~~~~~~~~~~~~~~~~vGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~V~vs~ 280 (473)
...+...+++|+...++ +.+ .++ |++++|||+..+. . ...++++++.+|++. +++++|||||
T Consensus 242 l~~~~~l~lvns~~~~d-----~~r-p~~-p~v~~vGgi~~~~-~---------~~~~l~~~l~~fl~~-~~~g~V~vS~ 303 (507)
T PHA03392 242 LRNRVQLLFVNVHPVFD-----NNR-PVP-PSVQYLGGLHLHK-K---------PPQPLDDYLEEFLNN-STNGVVYVSF 303 (507)
T ss_pred HHhCCcEEEEecCcccc-----CCC-CCC-CCeeeecccccCC-C---------CCCCCCHHHHHHHhc-CCCcEEEEEC
Confidence 11122344555554444 333 466 8999999997643 1 014578899999998 4568999999
Q ss_pred CCccc---CCHHHHHHHHHHHHhCCCcEEEEEeCCCccCCcccCCCCchhhHHhhcCCCeEeecCccHHHhhhccCccce
Q 042753 281 GSRYV---LTAKQIHELAAALEKTDVDFVYCVREPDERHASQDCGVLPDGFEDRVAGRGYVIRGWSQQVAILRHKAVGAF 357 (473)
Q Consensus 281 Gs~~~---~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~v~~~~pq~~lL~~~~v~~~ 357 (473)
||... .+.++++.+++++++.+++|||+++... . ...+ ++|+++.+|+||.+||+|+++++|
T Consensus 304 GS~~~~~~~~~~~~~~~l~a~~~l~~~viw~~~~~~----~--~~~~---------p~Nv~i~~w~Pq~~lL~hp~v~~f 368 (507)
T PHA03392 304 GSSIDTNDMDNEFLQMLLRTFKKLPYNVLWKYDGEV----E--AINL---------PANVLTQKWFPQRAVLKHKNVKAF 368 (507)
T ss_pred CCCCcCCCCCHHHHHHHHHHHHhCCCeEEEEECCCc----C--cccC---------CCceEEecCCCHHHHhcCCCCCEE
Confidence 99853 5788999999999999999999998642 0 0123 479999999999999999999999
Q ss_pred eeccCchhHHHHHhhCCeEecCcccccchhhHHHHHHHhcceEEeccCCCCCCCHHHHHHHHHHHhCCcHHHHHHHHHHH
Q 042753 358 LTHCGWNSVLEGVSAGVVMLTWPMDADQYTNAQLLVDQLGVGIRVGEGTRNIPESDELARLLAQSVDGPRRERLKARELS 437 (473)
Q Consensus 358 ItHgG~~s~~eal~~GvP~l~~P~~~DQ~~na~rv~~~~G~G~~l~~~~~~~~~~~~l~~~i~~~l~~~~~~~~~a~~~~ 437 (473)
|||||+||++||+++|||||++|+++||+.||+|+++. |+|+.++ ..+++.++|.++|+++++|+ +|+++|++++
T Consensus 369 ItHGG~~s~~Eal~~GvP~v~iP~~~DQ~~Na~rv~~~-G~G~~l~---~~~~t~~~l~~ai~~vl~~~-~y~~~a~~ls 443 (507)
T PHA03392 369 VTQGGVQSTDEAIDALVPMVGLPMMGDQFYNTNKYVEL-GIGRALD---TVTVSAAQLVLAIVDVIENP-KYRKNLKELR 443 (507)
T ss_pred EecCCcccHHHHHHcCCCEEECCCCccHHHHHHHHHHc-CcEEEec---cCCcCHHHHHHHHHHHhCCH-HHHHHHHHHH
Confidence 99999999999999999999999999999999999955 9999999 88999999999999999997 9999999999
Q ss_pred HHHHHHHhcCCChHHHHHHHHHHHHhhc-cCCCcc
Q 042753 438 GAALSAVVKGGSSDRDLNDFIKRINELK-SGKNLT 471 (473)
Q Consensus 438 ~~~~~~~~~~gs~~~~~~~~~~~~~~~~-~~~~~~ 471 (473)
+.+++ ++-.+.++++ +++|++.++. ++++|+
T Consensus 444 ~~~~~--~p~~~~~~av-~~iE~v~r~~~g~~~lr 475 (507)
T PHA03392 444 HLIRH--QPMTPLHKAI-WYTEHVIRNKHGNTSLK 475 (507)
T ss_pred HHHHh--CCCCHHHHHH-HHHHHHHhCCCCccccc
Confidence 99985 2334456555 6677888887 777664
|
|
| >PF00201 UDPGT: UDP-glucoronosyl and UDP-glucosyl transferase; InterPro: IPR002213 UDP glycosyltransferases (UGT) are a superfamily of enzymes that catalyzes the addition of the glycosyl group from a UTP-sugar to a small hydrophobic molecule | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-51 Score=420.50 Aligned_cols=403 Identities=24% Similarity=0.323 Sum_probs=221.0
Q ss_pred cEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCCCChhhhhhhccCCCCCCeeEEEcCCCC-CCCCC---Ch---hh
Q 042753 6 AHILVYPFPTSGHIIPLLDLTNRLLTLGLNVTVLITQNNLPLLDSLNANHPSTSLQSLVLPQPK-WPAGS---PA---TR 78 (473)
Q Consensus 6 ~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~i~~~~~~~~~~~~~f~~l~~~~-~~~~~---~~---~~ 78 (473)
.|||++|+ ++||+.++.+|+++|++|||+||++++... ..+.... ...+++..++.+. .+... .. ..
T Consensus 1 ~kvLv~p~-~~SH~~~~~~l~~~L~~rGH~VTvl~~~~~-~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 74 (500)
T PF00201_consen 1 GKVLVFPM-AYSHFIFMRPLAEELAERGHNVTVLTPSPS-SSLNPSK----PSNIRFETYPDPYPEEEFEEIFPEFISKF 74 (500)
T ss_dssp ------------SHHHHHHHHHHHHHH-TTSEEEHHHHH-HT----------S-CCEEEE-----TT------TTHHHHH
T ss_pred CEEEEeCC-CcCHHHHHHHHHHHHHhcCCceEEEEeecc-ccccccc----ccceeeEEEcCCcchHHHhhhhHHHHHHH
Confidence 47888886 789999999999999999999999987532 1222111 1245565555331 11111 10 00
Q ss_pred HH------HHHHHHH------HHh---------hHHHHHHHhcCCCCCcEEEeCCCcchHHHHHHHhCCCcEEEecchHH
Q 042753 79 LL------KFMRVLR------ELH---------YPALLDWFKSHPSPPVAILSDFFLGWTQGLAAELGLPRVVFSPSGAF 137 (473)
Q Consensus 79 ~~------~~~~~~~------~~~---------~~~l~~~l~~~~~~pD~VV~D~~~~~~~~~A~~~giP~v~~~~~~~~ 137 (473)
+. .+...+. ... ++.+.+.+++. ++|++|+|.+..|+..+|+.++||.+.+.+....
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~~l~d~~l~~~l~~~--~fDlvI~d~f~~c~~~la~~l~iP~i~~~s~~~~ 152 (500)
T PF00201_consen 75 FSESSFANSFWEMFKMLNAFFDFFSKSCEDLLSDPELMEQLKSE--KFDLVISDAFDPCGLALAHYLGIPVIIISSSTPM 152 (500)
T ss_dssp HHHHCCHHHHHHHHHHHHCHHHS----E--EEEETTSTTHHHHH--HHCT-EEEEEESSHHHHHHHHHHTHHHHHHCCSC
T ss_pred hhhcccchhHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhh--ccccceEeeccchhHHHHHHhcCCeEEEeccccc
Confidence 00 0111110 000 12233445555 7999999999889999999999999876543321
Q ss_pred HHHHHHhhhccCCCCCCCCCCCccccCCC----CCCCCCCCccccchhhhccCCCCCchHHHHHHhhhccC-----CcEE
Q 042753 138 ALSVSFAMWTDLPTNDDPDNVDALVSFPR----VPNCPVYPWYQISHLYRTLKEGDPDWDLHRSNMMANKT-----SWGI 208 (473)
Q Consensus 138 ~~~~~~~~~~~~p~~~~~~~~~~~~~~p~----l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~ 208 (473)
... ... .......+.++|. ++..+++..|....+.. . ..+.+.+....... ..+.
T Consensus 153 ~~~--------~~~--~~g~p~~psyvP~~~s~~~~~msf~~Ri~N~l~~-~-----~~~~~~~~~~~~~~~~~~~~~~~ 216 (500)
T PF00201_consen 153 YDL--------SSF--SGGVPSPPSYVPSMFSDFSDRMSFWQRIKNFLFY-L-----YFRFIFRYFFSPQDKLYKKYFGF 216 (500)
T ss_dssp SCC--------TCC--TSCCCTSTTSTTCBCCCSGTTSSSST--TTSHHH-H-----HHHHHHHHGGGS-TTS-EEESS-
T ss_pred chh--------hhh--ccCCCCChHHhccccccCCCccchhhhhhhhhhh-h-----hhccccccchhhHHHHHhhhccc
Confidence 000 000 0001111233333 22333333222111110 0 11111111111100 1111
Q ss_pred eecchHHh-h---------HHHHHHHHHhhCCCcEEEeccCCCCCCcchhhccCCCCCCCChhhhHHHhcCCCCCcEEEE
Q 042753 209 VFNSFAEL-E---------RVYIDHMKKEMGHDRVWAVGPVLPPDDDLVESMCRGGSSSVPAHDVLTWLDSRRDESVVYV 278 (473)
Q Consensus 209 ~~~s~~~l-e---------~~~~~~~~~~~~~~~~~~vGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~V~v 278 (473)
.. +..++ . ...++++++.. |++.+||++.... + .++++++++|++..+++++|||
T Consensus 217 ~~-~~~~~~~~~~l~l~ns~~~ld~prp~~--p~v~~vGgl~~~~-~-----------~~l~~~~~~~~~~~~~~~vv~v 281 (500)
T PF00201_consen 217 PF-SFRELLSNASLVLINSHPSLDFPRPLL--PNVVEVGGLHIKP-A-----------KPLPEELWNFLDSSGKKGVVYV 281 (500)
T ss_dssp GG-GCHHHHHHHHHCCSSTEEE----HHHH--CTSTTGCGC-S----------------TCHHHHHHHTSTTTTTEEEEE
T ss_pred cc-ccHHHHHHHHHHhhhccccCcCCcchh--hcccccCcccccc-c-----------cccccccchhhhccCCCCEEEE
Confidence 11 11111 1 11233444433 5899999987765 4 5688999999997668899999
Q ss_pred EeCCccc-CCHHHHHHHHHHHHhCCCcEEEEEeCCCccCCcccCCCCchhhHHhhcCCCeEeecCccHHHhhhccCccce
Q 042753 279 CFGSRYV-LTAKQIHELAAALEKTDVDFVYCVREPDERHASQDCGVLPDGFEDRVAGRGYVIRGWSQQVAILRHKAVGAF 357 (473)
Q Consensus 279 s~Gs~~~-~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~v~~~~pq~~lL~~~~v~~~ 357 (473)
||||... .+.+..+.++++|++.+++|||++++.. ...+| +|+++.+|+||.+||+|+++++|
T Consensus 282 sfGs~~~~~~~~~~~~~~~~~~~~~~~~iW~~~~~~-------~~~l~---------~n~~~~~W~PQ~~lL~hp~v~~f 345 (500)
T PF00201_consen 282 SFGSIVSSMPEEKLKEIAEAFENLPQRFIWKYEGEP-------PENLP---------KNVLIVKWLPQNDLLAHPRVKLF 345 (500)
T ss_dssp E-TSSSTT-HHHHHHHHHHHHHCSTTEEEEEETCSH-------GCHHH---------TTEEEESS--HHHHHTSTTEEEE
T ss_pred ecCcccchhHHHHHHHHHHHHhhCCCcccccccccc-------ccccc---------ceEEEeccccchhhhhcccceee
Confidence 9999975 4555588899999999999999998742 12223 78899999999999999999999
Q ss_pred eeccCchhHHHHHhhCCeEecCcccccchhhHHHHHHHhcceEEeccCCCCCCCHHHHHHHHHHHhCCcHHHHHHHHHHH
Q 042753 358 LTHCGWNSVLEGVSAGVVMLTWPMDADQYTNAQLLVDQLGVGIRVGEGTRNIPESDELARLLAQSVDGPRRERLKARELS 437 (473)
Q Consensus 358 ItHgG~~s~~eal~~GvP~l~~P~~~DQ~~na~rv~~~~G~G~~l~~~~~~~~~~~~l~~~i~~~l~~~~~~~~~a~~~~ 437 (473)
|||||+||++||+++|||||++|+++||+.||+++++. |+|+.++ ..++|.++|.++|+++|+|+ +|++||++++
T Consensus 346 itHgG~~s~~Ea~~~gvP~l~~P~~~DQ~~na~~~~~~-G~g~~l~---~~~~~~~~l~~ai~~vl~~~-~y~~~a~~ls 420 (500)
T PF00201_consen 346 ITHGGLNSTQEALYHGVPMLGIPLFGDQPRNAARVEEK-GVGVVLD---KNDLTEEELRAAIREVLENP-SYKENAKRLS 420 (500)
T ss_dssp EES--HHHHHHHHHCT--EEE-GCSTTHHHHHHHHHHT-TSEEEEG---GGC-SHHHHHHHHHHHHHSH-HHHHHHHHHH
T ss_pred eeccccchhhhhhhccCCccCCCCcccCCccceEEEEE-eeEEEEE---ecCCcHHHHHHHHHHHHhhh-HHHHHHHHHH
Confidence 99999999999999999999999999999999999955 9999999 89999999999999999997 9999999999
Q ss_pred HHHHHHHhcCCChHHHHHHHHHHHHhhccCCCcc
Q 042753 438 GAALSAVVKGGSSDRDLNDFIKRINELKSGKNLT 471 (473)
Q Consensus 438 ~~~~~~~~~~gs~~~~~~~~~~~~~~~~~~~~~~ 471 (473)
+.+++. +-. ..+.+-.++|++.++.++.+|+
T Consensus 421 ~~~~~~--p~~-p~~~~~~~ie~v~~~~~~~~l~ 451 (500)
T PF00201_consen 421 SLFRDR--PIS-PLERAVWWIEYVARHGGAPHLR 451 (500)
T ss_dssp HTTT------------------------------
T ss_pred HHHhcC--CCC-HHHHHHHHHHHHHhcCCCcccC
Confidence 999863 223 3455667788888887766654
|
This family currently consist of: Mammalian UDP-glucuronosyl transferases (2.4.1.17 from EC) (UDPGT) []. A large family of membrane-bound microsomal enzymes which catalyze the transfer of glucuronic acid to a wide variety of exogenous and endogenous lipophilic substrates. These enzymes are of major importance in the detoxification and subsequent elimination of xenobiotics such as drugs and carcinogens. A large number of putative UDPGT from Caenorhabditis elegans. Mammalian 2-hydroxyacylsphingosine 1-beta-galactosyltransferase [] (2.4.1.45 from EC) (also known as UDP-galactose-ceramide galactosyltransferase). This enzyme catalyzes the transfer of galactose to ceramide, a key enzymatic step in the biosynthesis of galactocerebrosides, which are abundant sphingolipids of the myelin membrane of the central nervous system and peripheral nervous system. Plants flavonol O(3)-glucosyltransferase (2.4.1.91 from EC). An enzyme [] that catalyzes the transfer of glucose from UDP-glucose to a flavanol. This reaction is essential and one of the last steps in anthocyanin pigment biosynthesis. Baculoviruses ecdysteroid UDP-glucosyltransferase (2.4.1 from EC) [] (egt). This enzyme catalyzes the transfer of glucose from UDP-glucose to ectysteroids which are insect molting hormones. The expression of egt in the insect host interferes with the normal insect development by blocking the molting process. Prokaryotic zeaxanthin glucosyltransferase (2.4.1 from EC) (gene crtX), an enzyme involved in carotenoid biosynthesis and that catalyses the glycosylation reaction which converts zeaxanthin to zeaxanthin-beta-diglucoside. Streptomyces macrolide glycosyltransferases (2.4.1 from EC) []. These enzymes specifically inactivates macrolide anitibiotics via 2'-O-glycosylation using UDP-glucose. These enzymes share a conserved domain of about 50 amino acid residues located in their C-terminal section.; GO: 0016758 transferase activity, transferring hexosyl groups, 0008152 metabolic process; PDB: 3HBJ_A 3HBF_A 2PQ6_A 3IA7_B 3RSC_A 3IAA_B 2IYA_A 2IYF_B 2O6L_A 2VCH_A .... |
| >TIGR01426 MGT glycosyltransferase, MGT family | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-43 Score=352.02 Aligned_cols=370 Identities=18% Similarity=0.197 Sum_probs=252.7
Q ss_pred EcCCCCCChHHHHHHHHHHHhCCCeEEEEeCCCChhhhhhhccCCCCCCeeEEEcCCCCCC-CCCC-------hhhHHHH
Q 042753 11 YPFPTSGHIIPLLDLTNRLLTLGLNVTVLITQNNLPLLDSLNANHPSTSLQSLVLPQPKWP-AGSP-------ATRLLKF 82 (473)
Q Consensus 11 ~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~i~~~~~~~~~~~~~f~~l~~~~~~-~~~~-------~~~~~~~ 82 (473)
+.+|++||++|+++||++|.+|||+|+|++++.+.+.+++. |+.|..++..... .... ...+..+
T Consensus 1 ~~~p~~Ghv~P~l~lA~~L~~~Gh~V~~~~~~~~~~~v~~~-------G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 73 (392)
T TIGR01426 1 FNIPAHGHVNPTLGVVEELVARGHRVTYATTEEFAERVEAA-------GAEFVLYGSALPPPDNPPENTEEEPIDIIEKL 73 (392)
T ss_pred CCCCccccccccHHHHHHHHhCCCeEEEEeCHHHHHHHHHc-------CCEEEecCCcCccccccccccCcchHHHHHHH
Confidence 36799999999999999999999999999999999888876 6888877643211 1111 0111122
Q ss_pred HHHHHHHhhHHHHHHHhcCCCCCcEEEeCCCcchHHHHHHHhCCCcEEEecchHHHHHHHHhhhccCCCCCCCCCCCccc
Q 042753 83 MRVLRELHYPALLDWFKSHPSPPVAILSDFFLGWTQGLAAELGLPRVVFSPSGAFALSVSFAMWTDLPTNDDPDNVDALV 162 (473)
Q Consensus 83 ~~~~~~~~~~~l~~~l~~~~~~pD~VV~D~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 162 (473)
..... ...+.+.+++++. +||+||+|.+++++..+|+++|||+|.+++..... . .+. .
T Consensus 74 ~~~~~-~~~~~l~~~~~~~--~pDlVi~d~~~~~~~~~A~~~giP~v~~~~~~~~~--~-----~~~------------~ 131 (392)
T TIGR01426 74 LDEAE-DVLPQLEEAYKGD--RPDLIVYDIASWTGRLLARKWDVPVISSFPTFAAN--E-----EFE------------E 131 (392)
T ss_pred HHHHH-HHHHHHHHHhcCC--CCCEEEECCccHHHHHHHHHhCCCEEEEehhhccc--c-----ccc------------c
Confidence 22222 2334566667777 99999999998899999999999999986543210 0 000 0
Q ss_pred cCCCCCCCCCCCccccchhhhccCCCCCchHHHHHHhhhc------------cCCcEEeecchHHhhHHHHHHHHHhhCC
Q 042753 163 SFPRVPNCPVYPWYQISHLYRTLKEGDPDWDLHRSNMMAN------------KTSWGIVFNSFAELERVYIDHMKKEMGH 230 (473)
Q Consensus 163 ~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~s~~~le~~~~~~~~~~~~~ 230 (473)
..+.+............... ....+.+.+..... ......+..+ ++.+++....|+
T Consensus 132 ~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~r~~~gl~~~~~~~~~~~~~~~~l~~~-----~~~l~~~~~~~~- 199 (392)
T TIGR01426 132 MVSPAGEGSAEEGAIAERGL------AEYVARLSALLEEHGITTPPVEFLAAPRRDLNLVYT-----PKAFQPAGETFD- 199 (392)
T ss_pred cccccchhhhhhhccccchh------HHHHHHHHHHHHHhCCCCCCHHHHhcCCcCcEEEeC-----ChHhCCCccccC-
Confidence 00000000000000000000 00000011110000 0000011111 233333344577
Q ss_pred CcEEEeccCCCCCCcchhhccCCCCCCCChhhhHHHhcCCCCCcEEEEEeCCcccCCHHHHHHHHHHHHhCCCcEEEEEe
Q 042753 231 DRVWAVGPVLPPDDDLVESMCRGGSSSVPAHDVLTWLDSRRDESVVYVCFGSRYVLTAKQIHELAAALEKTDVDFVYCVR 310 (473)
Q Consensus 231 ~~~~~vGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~V~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~ 310 (473)
++++++||+.... . . ...|.....++++||||+||........++.+++++.+.+.+++|.++
T Consensus 200 ~~~~~~Gp~~~~~-~------------~----~~~~~~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~g 262 (392)
T TIGR01426 200 DSFTFVGPCIGDR-K------------E----DGSWERPGDGRPVVLISLGTVFNNQPSFYRTCVEAFRDLDWHVVLSVG 262 (392)
T ss_pred CCeEEECCCCCCc-c------------c----cCCCCCCCCCCCEEEEecCccCCCCHHHHHHHHHHHhcCCCeEEEEEC
Confidence 8899999987654 2 0 112555546789999999998766667888999999999999999987
Q ss_pred CCCccCCcccCCCCchhhHHhhcCCCeEeecCccHHHhhhccCccceeeccCchhHHHHHhhCCeEecCcccccchhhHH
Q 042753 311 EPDERHASQDCGVLPDGFEDRVAGRGYVIRGWSQQVAILRHKAVGAFLTHCGWNSVLEGVSAGVVMLTWPMDADQYTNAQ 390 (473)
Q Consensus 311 ~~~~~~~~~~~~~lp~~~~~~~~~~nv~v~~~~pq~~lL~~~~v~~~ItHgG~~s~~eal~~GvP~l~~P~~~DQ~~na~ 390 (473)
... + .+.+.. .++|+.+.+|+||.++|+++++ +|||||+||++||+++|+|+|++|...||+.||+
T Consensus 263 ~~~----~--~~~~~~------~~~~v~~~~~~p~~~ll~~~~~--~I~hgG~~t~~Eal~~G~P~v~~p~~~dq~~~a~ 328 (392)
T TIGR01426 263 RGV----D--PADLGE------LPPNVEVRQWVPQLEILKKADA--FITHGGMNSTMEALFNGVPMVAVPQGADQPMTAR 328 (392)
T ss_pred CCC----C--hhHhcc------CCCCeEEeCCCCHHHHHhhCCE--EEECCCchHHHHHHHhCCCEEecCCcccHHHHHH
Confidence 642 0 011110 2468899999999999999996 9999999999999999999999999999999999
Q ss_pred HHHHHhcceEEeccCCCCCCCHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHH
Q 042753 391 LLVDQLGVGIRVGEGTRNIPESDELARLLAQSVDGPRRERLKARELSGAALSAVVKGGSSDRDLNDFIKRI 461 (473)
Q Consensus 391 rv~~~~G~G~~l~~~~~~~~~~~~l~~~i~~~l~~~~~~~~~a~~~~~~~~~~~~~~gs~~~~~~~~~~~~ 461 (473)
+++ ++|+|+.+. ..++++++|.++|+++++|+ +|+++++++++.++. .++.+.+++.+++.+
T Consensus 329 ~l~-~~g~g~~l~---~~~~~~~~l~~ai~~~l~~~-~~~~~~~~l~~~~~~----~~~~~~aa~~i~~~~ 390 (392)
T TIGR01426 329 RIA-ELGLGRHLP---PEEVTAEKLREAVLAVLSDP-RYAERLRKMRAEIRE----AGGARRAADEIEGFL 390 (392)
T ss_pred HHH-HCCCEEEec---cccCCHHHHHHHHHHHhcCH-HHHHHHHHHHHHHHH----cCCHHHHHHHHHHhh
Confidence 999 559999998 78899999999999999997 999999999999963 355777777776654
|
This model describes the MGT (macroside glycosyltransferase) subfamily of the UDP-glucuronosyltransferase family. Members include a number of glucosyl transferases for macrolide antibiotic inactivation, but also include transferases of glucose-related sugars for macrolide antibiotic production. |
| >cd03784 GT1_Gtf_like This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-43 Score=351.03 Aligned_cols=373 Identities=17% Similarity=0.103 Sum_probs=246.9
Q ss_pred cEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCCCChhhhhhhccCCCCCCeeEEEcCCCCCC----CCC-------
Q 042753 6 AHILVYPFPTSGHIIPLLDLTNRLLTLGLNVTVLITQNNLPLLDSLNANHPSTSLQSLVLPQPKWP----AGS------- 74 (473)
Q Consensus 6 ~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~i~~~~~~~~~~~~~f~~l~~~~~~----~~~------- 74 (473)
|||+|++.|+.||++|+++||++|++|||+|+|++++.+...++.. |++|..++..... ...
T Consensus 1 mrIl~~~~p~~GHv~P~l~la~~L~~rGh~V~~~t~~~~~~~v~~~-------G~~~~~~~~~~~~~~~~~~~~~~~~~~ 73 (401)
T cd03784 1 MRVLITTIGSRGDVQPLVALAWALRAAGHEVRVATPPEFADLVEAA-------GLEFVPVGGDPDELLASPERNAGLLLL 73 (401)
T ss_pred CeEEEEeCCCcchHHHHHHHHHHHHHCCCeEEEeeCHhHHHHHHHc-------CCceeeCCCCHHHHHhhhhhccccccc
Confidence 6999999999999999999999999999999999999888888765 7888877642100 000
Q ss_pred ChhhH----HHHHHHHHHHhhHHHHHHHhcCCCCCcEEEeCCCcchHHHHHHHhCCCcEEEecchHHHHHHHHhhhccCC
Q 042753 75 PATRL----LKFMRVLRELHYPALLDWFKSHPSPPVAILSDFFLGWTQGLAAELGLPRVVFSPSGAFALSVSFAMWTDLP 150 (473)
Q Consensus 75 ~~~~~----~~~~~~~~~~~~~~l~~~l~~~~~~pD~VV~D~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~p 150 (473)
..... ..+..... .....+.+.+++. +||+||+|.+.+++..+|+++|||+|.+++.+......
T Consensus 74 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~--~pDlvi~d~~~~~~~~~A~~~giP~v~~~~~~~~~~~~--------- 141 (401)
T cd03784 74 GPGLLLGALRLLRREAE-AMLDDLVAAARDW--GPDLVVADPLAFAGAVAAEALGIPAVRLLLGPDTPTSA--------- 141 (401)
T ss_pred chHHHHHHHHHHHHHHH-HHHHHHHHHhccc--CCCEEEeCcHHHHHHHHHHHhCCCeEEeecccCCcccc---------
Confidence 00111 11222222 3334455556667 99999999988889999999999999998765421000
Q ss_pred CCCCCCCCCccccCCCCCCCCCCCccccchhhhccCCCCCchHHHHHHhhhccCCcEEee------cchHHh--hHHHHH
Q 042753 151 TNDDPDNVDALVSFPRVPNCPVYPWYQISHLYRTLKEGDPDWDLHRSNMMANKTSWGIVF------NSFAEL--ERVYID 222 (473)
Q Consensus 151 ~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~s~~~l--e~~~~~ 222 (473)
. +.+. . ............. ..............+..|+.. .....+ -.+.+.
T Consensus 142 --------~-~~~~----~---~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~gl~~~~~~~~~~~~~~~~~~~~~~ 201 (401)
T cd03784 142 --------F-PPPL----G---RANLRLYALLEAE----LWQDLLGAWLRARRRRLGLPPLSLLDGSDVPELYGFSPAVL 201 (401)
T ss_pred --------C-CCcc----c---hHHHHHHHHHHHH----HHHHHHHHHHHHHHHhcCCCCCcccccCCCcEEEecCcccC
Confidence 0 0000 0 0000000000000 000011111111111111100 000000 011111
Q ss_pred HHHHhhCCCcEEEec-cCCCCCCcchhhccCCCCCCCChhhhHHHhcCCCCCcEEEEEeCCccc-CCHHHHHHHHHHHHh
Q 042753 223 HMKKEMGHDRVWAVG-PVLPPDDDLVESMCRGGSSSVPAHDVLTWLDSRRDESVVYVCFGSRYV-LTAKQIHELAAALEK 300 (473)
Q Consensus 223 ~~~~~~~~~~~~~vG-pl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~V~vs~Gs~~~-~~~~~~~~~~~al~~ 300 (473)
.....|+ ++..++| ++.... . ....++++..|++. ++++||||+||... .....+..++++++.
T Consensus 202 ~~~~~~~-~~~~~~g~~~~~~~-~----------~~~~~~~~~~~~~~--~~~~v~v~~Gs~~~~~~~~~~~~~~~a~~~ 267 (401)
T cd03784 202 PPPPDWP-RFDLVTGYGFRDVP-Y----------NGPPPPELWLFLAA--GRPPVYVGFGSMVVRDPEALARLDVEAVAT 267 (401)
T ss_pred CCCCCcc-ccCcEeCCCCCCCC-C----------CCCCCHHHHHHHhC--CCCcEEEeCCCCcccCHHHHHHHHHHHHHH
Confidence 2233455 5667775 443332 1 13345678888876 78999999999976 445677889999999
Q ss_pred CCCcEEEEEeCCCccCCcccCCCCchhhHHhhcCCCeEeecCccHHHhhhccCccceeeccCchhHHHHHhhCCeEecCc
Q 042753 301 TDVDFVYCVREPDERHASQDCGVLPDGFEDRVAGRGYVIRGWSQQVAILRHKAVGAFLTHCGWNSVLEGVSAGVVMLTWP 380 (473)
Q Consensus 301 ~~~~~i~~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~v~~~~pq~~lL~~~~v~~~ItHgG~~s~~eal~~GvP~l~~P 380 (473)
.+.++||+++... . .... .++|+++.+|+||.++|+++++ ||||||+||+.||+++|||+|++|
T Consensus 268 ~~~~~i~~~g~~~----~-~~~~---------~~~~v~~~~~~p~~~ll~~~d~--~I~hgG~~t~~eal~~GvP~v~~P 331 (401)
T cd03784 268 LGQRAILSLGWGG----L-GAED---------LPDNVRVVDFVPHDWLLPRCAA--VVHHGGAGTTAAALRAGVPQLVVP 331 (401)
T ss_pred cCCeEEEEccCcc----c-cccC---------CCCceEEeCCCCHHHHhhhhhe--eeecCCchhHHHHHHcCCCEEeeC
Confidence 9999999998753 0 0011 2478999999999999999997 999999999999999999999999
Q ss_pred ccccchhhHHHHHHHhcceEEeccCCCCCCCHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHhcCCChHHHHHHH
Q 042753 381 MDADQYTNAQLLVDQLGVGIRVGEGTRNIPESDELARLLAQSVDGPRRERLKARELSGAALSAVVKGGSSDRDLNDF 457 (473)
Q Consensus 381 ~~~DQ~~na~rv~~~~G~G~~l~~~~~~~~~~~~l~~~i~~~l~~~~~~~~~a~~~~~~~~~~~~~~gs~~~~~~~~ 457 (473)
+..||+.||++++ ++|+|+.++ ..+++.++|.++|++++++ .+++++++..+.+++ .++...+++.+
T Consensus 332 ~~~dQ~~~a~~~~-~~G~g~~l~---~~~~~~~~l~~al~~~l~~--~~~~~~~~~~~~~~~----~~g~~~~~~~i 398 (401)
T cd03784 332 FFGDQPFWAARVA-ELGAGPALD---PRELTAERLAAALRRLLDP--PSRRRAAALLRRIRE----EDGVPSAADVI 398 (401)
T ss_pred CCCCcHHHHHHHH-HCCCCCCCC---cccCCHHHHHHHHHHHhCH--HHHHHHHHHHHHHHh----ccCHHHHHHHH
Confidence 9999999999999 559999998 6779999999999999996 466677777777742 34455555444
|
Gtfs transfer sugar moieties from an activated NDP-sugar donor to the oxidatively cross-linked heptapeptide core of vancomycin group antibiotics. The core structure is important for the bioactivity of the antibiotics. |
| >KOG1192 consensus UDP-glucuronosyl and UDP-glucosyl transferase [Carbohydrate transport and metabolism; Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-42 Score=355.91 Aligned_cols=423 Identities=27% Similarity=0.345 Sum_probs=263.0
Q ss_pred ccEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCCCChhhhhhhccCCCCCCeeEEEcCCCC-CCCCCChh-----h
Q 042753 5 GAHILVYPFPTSGHIIPLLDLTNRLLTLGLNVTVLITQNNLPLLDSLNANHPSTSLQSLVLPQPK-WPAGSPAT-----R 78 (473)
Q Consensus 5 ~~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~i~~~~~~~~~~~~~f~~l~~~~-~~~~~~~~-----~ 78 (473)
.++++++++|++||++|+..+|+.|+++||+||++++..................+....+++.. .++++... .
T Consensus 5 ~~~~il~~~p~~sH~~~~~~la~~L~~~gh~vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (496)
T KOG1192|consen 5 KAHNILVPFPGQSHLNPMLQLAKRLAERGHNVTVVTPSFNALKLSKSSKSKSIKKINPPPFEFLTIPDGLPEGWEDDDLD 84 (496)
T ss_pred cceeEEEECCcccHHHHHHHHHHHHHHcCCceEEEEeechhcccCCcccceeeeeeecChHHhhhhhhhhccchHHHHHH
Confidence 36788889999999999999999999999999999998664443221000000000111111111 11222111 0
Q ss_pred ----HHHHHHHHHHHhhHHHHHHHhcCCCCCcEEEeCCCcchHHHHHHHhC-CCcEEEecchHHHHHHHHhhhccCCCCC
Q 042753 79 ----LLKFMRVLRELHYPALLDWFKSHPSPPVAILSDFFLGWTQGLAAELG-LPRVVFSPSGAFALSVSFAMWTDLPTND 153 (473)
Q Consensus 79 ----~~~~~~~~~~~~~~~l~~~l~~~~~~pD~VV~D~~~~~~~~~A~~~g-iP~v~~~~~~~~~~~~~~~~~~~~p~~~ 153 (473)
...+...+...+.............++|++|+|.+..+...++.... ||...+.+..+.......+...
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~d~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~g~~~~~------ 158 (496)
T KOG1192|consen 85 ISESLLELNKTCEDLLRDPLEKLLLLKSEKFDLIISDPFLGLFLLLAIPSFVIPLLSFPTSSAVLLALGLPSPL------ 158 (496)
T ss_pred HHHHHHHHHHHHHHHHhchHHHHHHhhcCCccEEEechhhHHHHHhcccceEEEeecccCchHHHHhcCCcCcc------
Confidence 11222233322223233333322114999999998667777776665 8888887777664433211110
Q ss_pred CCCCCCccccCCCCCC-----CCCCCcc-------ccchhhhccCCCCCchHHHHHHhhhc----cCCcEEeecc-hHHh
Q 042753 154 DPDNVDALVSFPRVPN-----CPVYPWY-------QISHLYRTLKEGDPDWDLHRSNMMAN----KTSWGIVFNS-FAEL 216 (473)
Q Consensus 154 ~~~~~~~~~~~p~l~~-----~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~s-~~~l 216 (473)
.++|.... .+.+..+ .++....................... ....++..++ +..+
T Consensus 159 --------~~~p~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~l 230 (496)
T KOG1192|consen 159 --------SYVPSPFSLSSGDDMSFPERVPNLIKKDLPSFLFSLSDDRKQDKISKELLGDILNWKPTASGIIVNASFIFL 230 (496)
T ss_pred --------cccCcccCccccccCcHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHhCCCcccccccHHHhhhcCeEEEE
Confidence 01221111 0001100 01111100000000001111111111 1122334444 5555
Q ss_pred hHHHHHHHHHh-hCCCcEEEeccCCCCCCcchhhccCCCCCCCChhhhHHHhcCCCC--CcEEEEEeCCcc---cCCHHH
Q 042753 217 ERVYIDHMKKE-MGHDRVWAVGPVLPPDDDLVESMCRGGSSSVPAHDVLTWLDSRRD--ESVVYVCFGSRY---VLTAKQ 290 (473)
Q Consensus 217 e~~~~~~~~~~-~~~~~~~~vGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~--~~~V~vs~Gs~~---~~~~~~ 290 (473)
+......++.. .. +++++|||+.... . ....+...+|++.... +++|||||||.. ..+.++
T Consensus 231 n~~~~~~~~~~~~~-~~v~~IG~l~~~~-~-----------~~~~~~~~~wl~~~~~~~~~vvyvSfGS~~~~~~lp~~~ 297 (496)
T KOG1192|consen 231 NSNPLLDFEPRPLL-PKVIPIGPLHVKD-S-----------KQKSPLPLEWLDILDESRHSVVYISFGSMVNSADLPEEQ 297 (496)
T ss_pred ccCcccCCCCCCCC-CCceEECcEEecC-c-----------cccccccHHHHHHHhhccCCeEEEECCcccccccCCHHH
Confidence 54443333222 24 7999999998875 2 1111133445554333 499999999998 799999
Q ss_pred HHHHHHHHHhC-CCcEEEEEeCCCccCCcccCCCCchhhHHhhcCCCeEeecCccHHHh-hhccCccceeeccCchhHHH
Q 042753 291 IHELAAALEKT-DVDFVYCVREPDERHASQDCGVLPDGFEDRVAGRGYVIRGWSQQVAI-LRHKAVGAFLTHCGWNSVLE 368 (473)
Q Consensus 291 ~~~~~~al~~~-~~~~i~~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~v~~~~pq~~l-L~~~~v~~~ItHgG~~s~~e 368 (473)
..+++.+|++. +++|+|+++.+. . ..+++++.++ ...||+..+|+||.++ |+|++++||||||||||++|
T Consensus 298 ~~~l~~~l~~~~~~~FiW~~~~~~----~---~~~~~~~~~~-~~~nV~~~~W~PQ~~lll~H~~v~~FvTHgG~nSt~E 369 (496)
T KOG1192|consen 298 KKELAKALESLQGVTFLWKYRPDD----S---IYFPEGLPNR-GRGNVVLSKWAPQNDLLLDHPAVGGFVTHGGWNSTLE 369 (496)
T ss_pred HHHHHHHHHhCCCceEEEEecCCc----c---hhhhhcCCCC-CcCceEEecCCCcHHHhcCCCcCcEEEECCcccHHHH
Confidence 99999999999 889999999863 0 1134444332 3457888899999998 59999999999999999999
Q ss_pred HHhhCCeEecCcccccchhhHHHHHHHhcceEEeccCCCCCCCHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHhcCC
Q 042753 369 GVSAGVVMLTWPMDADQYTNAQLLVDQLGVGIRVGEGTRNIPESDELARLLAQSVDGPRRERLKARELSGAALSAVVKGG 448 (473)
Q Consensus 369 al~~GvP~l~~P~~~DQ~~na~rv~~~~G~G~~l~~~~~~~~~~~~l~~~i~~~l~~~~~~~~~a~~~~~~~~~~~~~~g 448 (473)
++++|||||++|+++||+.||++++++ |.|..+. ..+++...+.+++.++++++ +|+++|+++++.+++ ...
T Consensus 370 ~~~~GvP~v~~Plf~DQ~~Na~~i~~~-g~~~v~~---~~~~~~~~~~~~~~~il~~~-~y~~~~~~l~~~~~~---~p~ 441 (496)
T KOG1192|consen 370 SIYSGVPMVCVPLFGDQPLNARLLVRH-GGGGVLD---KRDLVSEELLEAIKEILENE-EYKEAAKRLSEILRD---QPI 441 (496)
T ss_pred HHhcCCceecCCccccchhHHHHHHhC-CCEEEEe---hhhcCcHHHHHHHHHHHcCh-HHHHHHHHHHHHHHc---CCC
Confidence 999999999999999999999999977 6666666 56666666999999999997 999999999999984 444
Q ss_pred ChHHHHHHHHHHHHhhccCCCcc
Q 042753 449 SSDRDLNDFIKRINELKSGKNLT 471 (473)
Q Consensus 449 s~~~~~~~~~~~~~~~~~~~~~~ 471 (473)
+. ..+..++++..+...++++.
T Consensus 442 ~~-~~~~~~~e~~~~~~~~~~l~ 463 (496)
T KOG1192|consen 442 SP-ELAVKWVEFVARHGGAKHLK 463 (496)
T ss_pred CH-HHHHHHHHHHHhcCCCcccC
Confidence 45 66666778888877666654
|
|
| >COG1819 Glycosyl transferases, related to UDP-glucuronosyltransferase [Carbohydrate transport and metabolism / Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-41 Score=333.43 Aligned_cols=384 Identities=19% Similarity=0.228 Sum_probs=247.7
Q ss_pred ccEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCCCChhhhhhhccCCCCCCeeEEEcCCCCC-CCCC--ChhhHHH
Q 042753 5 GAHILVYPFPTSGHIIPLLDLTNRLLTLGLNVTVLITQNNLPLLDSLNANHPSTSLQSLVLPQPKW-PAGS--PATRLLK 81 (473)
Q Consensus 5 ~~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~i~~~~~~~~~~~~~f~~l~~~~~-~~~~--~~~~~~~ 81 (473)
++||+++..|+.||++|+++|+++|.++||+|+|++++.+.+.+++. ++.|..++.... .... .......
T Consensus 1 ~mkil~~~~~~~Ghv~p~~aL~~eL~~~gheV~~~~~~~~~~~ve~a-------g~~f~~~~~~~~~~~~~~~~~~~~~~ 73 (406)
T COG1819 1 RMKILFVVCGAYGHVNPCLALGKELRRRGHEVVFASTGKFKEFVEAA-------GLAFVAYPIRDSELATEDGKFAGVKS 73 (406)
T ss_pred CceEEEEeccccccccchHHHHHHHHhcCCeEEEEeCHHHHHHHHHh-------CcceeeccccCChhhhhhhhhhccch
Confidence 68999999999999999999999999999999999999999999988 566766654311 0111 0011111
Q ss_pred HHHHHH--HHhhHHHHHHHhcCCCCCcEEEeCCCcchHHHHHHHhCCCcEEEecchHHHHHHHHhhhccCCCCCCCCCCC
Q 042753 82 FMRVLR--ELHYPALLDWFKSHPSPPVAILSDFFLGWTQGLAAELGLPRVVFSPSGAFALSVSFAMWTDLPTNDDPDNVD 159 (473)
Q Consensus 82 ~~~~~~--~~~~~~l~~~l~~~~~~pD~VV~D~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 159 (473)
+..... .....++.+++.+. .||+++.|...+.+ .+++..++|++................+...
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~e~--~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------- 140 (406)
T COG1819 74 FRRLLQQFKKLIRELLELLREL--EPDLVVDDARLSLG-LAARLLGIPVVGINVAPYTPLPAAGLPLPPV---------- 140 (406)
T ss_pred hHHHhhhhhhhhHHHHHHHHhc--chhhhhcchhhhhh-hhhhhcccchhhhhhhhccCCcccccCcccc----------
Confidence 221111 13344666778888 99999999886655 8899999999886555433211111000000
Q ss_pred ccccCCCCCCCCCCCccccchhhhccCCCCCchHHHHHHhhhccCCcE--EeecchH-------HhhHHHHHHHH---Hh
Q 042753 160 ALVSFPRVPNCPVYPWYQISHLYRTLKEGDPDWDLHRSNMMANKTSWG--IVFNSFA-------ELERVYIDHMK---KE 227 (473)
Q Consensus 160 ~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~s~~-------~le~~~~~~~~---~~ 227 (473)
.....+......++............+ .......+..+ ...+.+. .++..+.+... ..
T Consensus 141 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 210 (406)
T COG1819 141 ------GIAGKLPIPLYPLPPRLVRPLIFARSW----LPKLVVRRNLGLELGLPNIRRLFASGPLLEIAYTDVLFPPGDR 210 (406)
T ss_pred ------cccccccccccccChhhccccccchhh----hhhhhhhhhccccccccchHHHhcCCCCccccccccccCCCCC
Confidence 000000000000000000000000000 00000001000 0000000 01111111000 11
Q ss_pred hCCCcEEEeccCCCCCCcchhhccCCCCCCCChhhhHHHhcCCCCCcEEEEEeCCcccCCHHHHHHHHHHHHhCCCcEEE
Q 042753 228 MGHDRVWAVGPVLPPDDDLVESMCRGGSSSVPAHDVLTWLDSRRDESVVYVCFGSRYVLTAKQIHELAAALEKTDVDFVY 307 (473)
Q Consensus 228 ~~~~~~~~vGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~V~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~ 307 (473)
+| ....++||+.... ..+...|.. .++++||||+||.... .++++.+++++.+.+.++|.
T Consensus 211 ~p-~~~~~~~~~~~~~----------------~~~~~~~~~--~d~~~vyvslGt~~~~-~~l~~~~~~a~~~l~~~vi~ 270 (406)
T COG1819 211 LP-FIGPYIGPLLGEA----------------ANELPYWIP--ADRPIVYVSLGTVGNA-VELLAIVLEALADLDVRVIV 270 (406)
T ss_pred CC-CCcCccccccccc----------------cccCcchhc--CCCCeEEEEcCCcccH-HHHHHHHHHHHhcCCcEEEE
Confidence 22 2344555554443 123333433 3799999999999876 88999999999999999999
Q ss_pred EEeCCCccCCcccCCCCchhhHHhhcCCCeEeecCccHHHhhhccCccceeeccCchhHHHHHhhCCeEecCcccccchh
Q 042753 308 CVREPDERHASQDCGVLPDGFEDRVAGRGYVIRGWSQQVAILRHKAVGAFLTHCGWNSVLEGVSAGVVMLTWPMDADQYT 387 (473)
Q Consensus 308 ~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~v~~~~pq~~lL~~~~v~~~ItHgG~~s~~eal~~GvP~l~~P~~~DQ~~ 387 (473)
.+.. . ......+| .|+++.+|+||.++|+++++ ||||||+||+.|||++|||+|++|...||+.
T Consensus 271 ~~~~-~----~~~~~~~p---------~n~~v~~~~p~~~~l~~ad~--vI~hGG~gtt~eaL~~gvP~vv~P~~~DQ~~ 334 (406)
T COG1819 271 SLGG-A----RDTLVNVP---------DNVIVADYVPQLELLPRADA--VIHHGGAGTTSEALYAGVPLVVIPDGADQPL 334 (406)
T ss_pred eccc-c----ccccccCC---------CceEEecCCCHHHHhhhcCE--EEecCCcchHHHHHHcCCCEEEecCCcchhH
Confidence 9977 2 11123344 78999999999999999997 9999999999999999999999999999999
Q ss_pred hHHHHHHHhcceEEeccCCCCCCCHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHh
Q 042753 388 NAQLLVDQLGVGIRVGEGTRNIPESDELARLLAQSVDGPRRERLKARELSGAALSAVVKGGSSDRDLNDFIKRINE 463 (473)
Q Consensus 388 na~rv~~~~G~G~~l~~~~~~~~~~~~l~~~i~~~l~~~~~~~~~a~~~~~~~~~~~~~~gs~~~~~~~~~~~~~~ 463 (473)
||.|++ ++|+|+.+. .+.++.+.|+++|+++|+|+ .|+++++++++.++. . ++...+.+.+.+...+
T Consensus 335 nA~rve-~~G~G~~l~---~~~l~~~~l~~av~~vL~~~-~~~~~~~~~~~~~~~---~-~g~~~~a~~le~~~~~ 401 (406)
T COG1819 335 NAERVE-ELGAGIALP---FEELTEERLRAAVNEVLADD-SYRRAAERLAEEFKE---E-DGPAKAADLLEEFARE 401 (406)
T ss_pred HHHHHH-HcCCceecC---cccCCHHHHHHHHHHHhcCH-HHHHHHHHHHHHhhh---c-ccHHHHHHHHHHHHhc
Confidence 999999 559999999 89999999999999999997 999999999999973 2 3344444444443433
|
|
| >PRK12446 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Reviewed | Back alignment and domain information |
|---|
Probab=99.96 E-value=7.6e-27 Score=226.10 Aligned_cols=323 Identities=15% Similarity=0.130 Sum_probs=206.4
Q ss_pred ccEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCCCChhhhhhhccCCCCCCeeEEEcCCCCCCCCCChhhHHHHHH
Q 042753 5 GAHILVYPFPTSGHIIPLLDLTNRLLTLGLNVTVLITQNNLPLLDSLNANHPSTSLQSLVLPQPKWPAGSPATRLLKFMR 84 (473)
Q Consensus 5 ~~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~i~~~~~~~~~~~~~f~~l~~~~~~~~~~~~~~~~~~~ 84 (473)
|+||++...++-||+.|.+++|++|.++||+|+|+++..-.+. .... ..++.|..++.. ++.....+..+..
T Consensus 1 ~~~i~~~~GGTGGHi~Pala~a~~l~~~g~~v~~vg~~~~~e~--~l~~---~~g~~~~~~~~~---~l~~~~~~~~~~~ 72 (352)
T PRK12446 1 MKKIVFTGGGSAGHVTPNLAIIPYLKEDNWDISYIGSHQGIEK--TIIE---KENIPYYSISSG---KLRRYFDLKNIKD 72 (352)
T ss_pred CCeEEEEcCCcHHHHHHHHHHHHHHHhCCCEEEEEECCCcccc--ccCc---ccCCcEEEEecc---CcCCCchHHHHHH
Confidence 7889999999999999999999999999999999998754321 1111 125777766532 2221111222211
Q ss_pred HHHHHh--hHHHHHHHhcCCCCCcEEEeCCCcc--hHHHHHHHhCCCcEEEecchHHHHHHHHhhhccCCCCCCCCCCCc
Q 042753 85 VLRELH--YPALLDWFKSHPSPPVAILSDFFLG--WTQGLAAELGLPRVVFSPSGAFALSVSFAMWTDLPTNDDPDNVDA 160 (473)
Q Consensus 85 ~~~~~~--~~~l~~~l~~~~~~pD~VV~D~~~~--~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~ 160 (473)
... .. .-...+++++. +||+||...... .+..+|..+++|++.....
T Consensus 73 ~~~-~~~~~~~~~~i~~~~--kPdvvi~~Ggy~s~p~~~aa~~~~~p~~i~e~n-------------------------- 123 (352)
T PRK12446 73 PFL-VMKGVMDAYVRIRKL--KPDVIFSKGGFVSVPVVIGGWLNRVPVLLHESD-------------------------- 123 (352)
T ss_pred HHH-HHHHHHHHHHHHHhc--CCCEEEecCchhhHHHHHHHHHcCCCEEEECCC--------------------------
Confidence 111 11 22345678999 999999876544 3578899999999874222
Q ss_pred cccCCCCCCCCCCCccccchhhhccCCCCCchHHHHHHhhhccCCcEEeecchHHhhHHHHHHHHHhhCCCcEEEeccCC
Q 042753 161 LVSFPRVPNCPVYPWYQISHLYRTLKEGDPDWDLHRSNMMANKTSWGIVFNSFAELERVYIDHMKKEMGHDRVWAVGPVL 240 (473)
Q Consensus 161 ~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~le~~~~~~~~~~~~~~~~~~vGpl~ 240 (473)
.+|++.+ +++.+.... +.-+|++-. ..++..++.++|+-+
T Consensus 124 --~~~g~~n-----------------------r~~~~~a~~-------v~~~f~~~~--------~~~~~~k~~~tG~Pv 163 (352)
T PRK12446 124 --MTPGLAN-----------------------KIALRFASK-------IFVTFEEAA--------KHLPKEKVIYTGSPV 163 (352)
T ss_pred --CCccHHH-----------------------HHHHHhhCE-------EEEEccchh--------hhCCCCCeEEECCcC
Confidence 1222211 111111111 122332211 111214788999655
Q ss_pred CCCCcchhhccCCCCCCCChhhhHHHhcCCCCCcEEEEEeCCcccCCH-HHHHHHHHHHHhCCCcEEEEEeCCCccCCcc
Q 042753 241 PPDDDLVESMCRGGSSSVPAHDVLTWLDSRRDESVVYVCFGSRYVLTA-KQIHELAAALEKTDVDFVYCVREPDERHASQ 319 (473)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~V~vs~Gs~~~~~~-~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~ 319 (473)
... - . ....+...+.+.-..++++|+|..||...... +.+.+++..+.. +.+++|+++.+.
T Consensus 164 r~~-~-----~-----~~~~~~~~~~~~l~~~~~~iLv~GGS~Ga~~in~~~~~~l~~l~~-~~~vv~~~G~~~------ 225 (352)
T PRK12446 164 REE-V-----L-----KGNREKGLAFLGFSRKKPVITIMGGSLGAKKINETVREALPELLL-KYQIVHLCGKGN------ 225 (352)
T ss_pred Ccc-c-----c-----cccchHHHHhcCCCCCCcEEEEECCccchHHHHHHHHHHHHhhcc-CcEEEEEeCCch------
Confidence 554 1 0 11112222233333468899999999975433 334445554432 488999998752
Q ss_pred cCCCCchhhHHhhcCCCeEeecCc-c-HHHhhhccCccceeeccCchhHHHHHhhCCeEecCccc-----ccchhhHHHH
Q 042753 320 DCGVLPDGFEDRVAGRGYVIRGWS-Q-QVAILRHKAVGAFLTHCGWNSVLEGVSAGVVMLTWPMD-----ADQYTNAQLL 392 (473)
Q Consensus 320 ~~~~lp~~~~~~~~~~nv~v~~~~-p-q~~lL~~~~v~~~ItHgG~~s~~eal~~GvP~l~~P~~-----~DQ~~na~rv 392 (473)
+..... + ..++.+..|+ + ..++|+++++ +|||||.+|+.|++++|+|+|++|+. .||..||+.+
T Consensus 226 ----~~~~~~-~--~~~~~~~~f~~~~m~~~~~~adl--vIsr~G~~t~~E~~~~g~P~I~iP~~~~~~~~~Q~~Na~~l 296 (352)
T PRK12446 226 ----LDDSLQ-N--KEGYRQFEYVHGELPDILAITDF--VISRAGSNAIFEFLTLQKPMLLIPLSKFASRGDQILNAESF 296 (352)
T ss_pred ----HHHHHh-h--cCCcEEecchhhhHHHHHHhCCE--EEECCChhHHHHHHHcCCCEEEEcCCCCCCCchHHHHHHHH
Confidence 111111 1 1344556887 4 4568999997 99999999999999999999999985 4899999999
Q ss_pred HHHhcceEEeccCCCCCCCHHHHHHHHHHHhCCcHHHHHHHHH
Q 042753 393 VDQLGVGIRVGEGTRNIPESDELARLLAQSVDGPRRERLKARE 435 (473)
Q Consensus 393 ~~~~G~G~~l~~~~~~~~~~~~l~~~i~~~l~~~~~~~~~a~~ 435 (473)
++. |+|..+. ..+++++.|.+++.++++|++.|++++++
T Consensus 297 ~~~-g~~~~l~---~~~~~~~~l~~~l~~ll~~~~~~~~~~~~ 335 (352)
T PRK12446 297 ERQ-GYASVLY---EEDVTVNSLIKHVEELSHNNEKYKTALKK 335 (352)
T ss_pred HHC-CCEEEcc---hhcCCHHHHHHHHHHHHcCHHHHHHHHHH
Confidence 955 9999998 78999999999999999875355544433
|
|
| >PF13528 Glyco_trans_1_3: Glycosyl transferase family 1 | Back alignment and domain information |
|---|
Probab=99.93 E-value=7.4e-24 Score=204.36 Aligned_cols=302 Identities=22% Similarity=0.255 Sum_probs=193.8
Q ss_pred cEEEEEcCC-CCCChHHHHHHHHHHHhCCCeEEEEeCCCChhhhhhhccCCCCCCeeEEEcCCCC---C-CCCCChhhHH
Q 042753 6 AHILVYPFP-TSGHIIPLLDLTNRLLTLGLNVTVLITQNNLPLLDSLNANHPSTSLQSLVLPQPK---W-PAGSPATRLL 80 (473)
Q Consensus 6 ~~Il~~~~~-~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~i~~~~~~~~~~~~~f~~l~~~~---~-~~~~~~~~~~ 80 (473)
|||++...+ |.||+.++++||++| |||+|+|++.....+.+... +....++... . ..+.......
T Consensus 1 MkIl~~v~~~G~GH~~R~~~la~~L--rg~~v~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~ 70 (318)
T PF13528_consen 1 MKILFYVQGHGLGHASRCLALARAL--RGHEVTFITSGPAPEFLKPR--------FPVREIPGLGPIQENGRLDRWKTVR 70 (318)
T ss_pred CEEEEEeCCCCcCHHHHHHHHHHHH--ccCceEEEEcCCcHHHhccc--------cCEEEccCceEeccCCccchHHHHH
Confidence 689877744 889999999999999 59999999998665555332 2333333111 0 1111111111
Q ss_pred HHH---HHHHHHhhHHHHHHHhcCCCCCcEEEeCCCcchHHHHHHHhCCCcEEEecchHHHHHHHHhhhccCCCCCCCCC
Q 042753 81 KFM---RVLRELHYPALLDWFKSHPSPPVAILSDFFLGWTQGLAAELGLPRVVFSPSGAFALSVSFAMWTDLPTNDDPDN 157 (473)
Q Consensus 81 ~~~---~~~~~~~~~~l~~~l~~~~~~pD~VV~D~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 157 (473)
... .... .....+.+++++. +||+||+|.. +.+..+|+..|||++.+........
T Consensus 71 ~~~~~~~~~~-~~~~~~~~~l~~~--~pDlVIsD~~-~~~~~aa~~~giP~i~i~~~~~~~~------------------ 128 (318)
T PF13528_consen 71 NNIRWLARLA-RRIRREIRWLREF--RPDLVISDFY-PLAALAARRAGIPVIVISNQYWFLH------------------ 128 (318)
T ss_pred HHHHhhHHHH-HHHHHHHHHHHhc--CCCEEEEcCh-HHHHHHHHhcCCCEEEEEehHHccc------------------
Confidence 111 1122 3344567788888 9999999954 5567889999999999877754310
Q ss_pred CCccccCCCCCCCCCCCccccchhhhccCCCCCchHHHHHHhhh--ccCCcEEeecchHHhhHHHHHHHHHhhCCCcEEE
Q 042753 158 VDALVSFPRVPNCPVYPWYQISHLYRTLKEGDPDWDLHRSNMMA--NKTSWGIVFNSFAELERVYIDHMKKEMGHDRVWA 235 (473)
Q Consensus 158 ~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~s~~~le~~~~~~~~~~~~~~~~~~ 235 (473)
+... ... .......+.+.... .......+.-++. .. .. .. .+..+
T Consensus 129 -------~~~~----~~~------------~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~-------~~-~~-~~~~~ 175 (318)
T PF13528_consen 129 -------PNFW----LPW------------DQDFGRLIERYIDRYHFPPADRRLALSFY-PP-------LP-PF-FRVPF 175 (318)
T ss_pred -------ccCC----cch------------hhhHHHHHHHhhhhccCCcccceecCCcc-cc-------cc-cc-ccccc
Confidence 0000 000 00011112222211 1222222222222 00 00 01 35667
Q ss_pred eccCCCCCCcchhhccCCCCCCCChhhhHHHhcCCCCCcEEEEEeCCcccCCHHHHHHHHHHHHhCC-CcEEEEEeCCCc
Q 042753 236 VGPVLPPDDDLVESMCRGGSSSVPAHDVLTWLDSRRDESVVYVCFGSRYVLTAKQIHELAAALEKTD-VDFVYCVREPDE 314 (473)
Q Consensus 236 vGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~V~vs~Gs~~~~~~~~~~~~~~al~~~~-~~~i~~~~~~~~ 314 (473)
+||+.... . ...+ . .+++.|+|++|+.... .+++++++.+ .++++. +...
T Consensus 176 ~~p~~~~~-~-----------~~~~-------~--~~~~~iLv~~gg~~~~------~~~~~l~~~~~~~~~v~-g~~~- 226 (318)
T PF13528_consen 176 VGPIIRPE-I-----------RELP-------P--EDEPKILVYFGGGGPG------DLIEALKALPDYQFIVF-GPNA- 226 (318)
T ss_pred cCchhccc-c-----------cccC-------C--CCCCEEEEEeCCCcHH------HHHHHHHhCCCCeEEEE-cCCc-
Confidence 88887765 2 0000 1 2567899999998643 6677888776 566655 5431
Q ss_pred cCCcccCCCCchhhHHhhcCCCeEeecCc--cHHHhhhccCccceeeccCchhHHHHHhhCCeEecCcc--cccchhhHH
Q 042753 315 RHASQDCGVLPDGFEDRVAGRGYVIRGWS--QQVAILRHKAVGAFLTHCGWNSVLEGVSAGVVMLTWPM--DADQYTNAQ 390 (473)
Q Consensus 315 ~~~~~~~~~lp~~~~~~~~~~nv~v~~~~--pq~~lL~~~~v~~~ItHgG~~s~~eal~~GvP~l~~P~--~~DQ~~na~ 390 (473)
.+ + ..+|+.+.+|. ...++|+.+++ +|+|||+||+.|++++|+|+|++|. ..+|..||+
T Consensus 227 ------~~--~-------~~~ni~~~~~~~~~~~~~m~~ad~--vIs~~G~~t~~Ea~~~g~P~l~ip~~~~~EQ~~~a~ 289 (318)
T PF13528_consen 227 ------AD--P-------RPGNIHVRPFSTPDFAELMAAADL--VISKGGYTTISEALALGKPALVIPRPGQDEQEYNAR 289 (318)
T ss_pred ------cc--c-------cCCCEEEeecChHHHHHHHHhCCE--EEECCCHHHHHHHHHcCCCEEEEeCCCCchHHHHHH
Confidence 01 1 24788888876 45679999997 9999999999999999999999999 789999999
Q ss_pred HHHHHhcceEEeccCCCCCCCHHHHHHHHHHH
Q 042753 391 LLVDQLGVGIRVGEGTRNIPESDELARLLAQS 422 (473)
Q Consensus 391 rv~~~~G~G~~l~~~~~~~~~~~~l~~~i~~~ 422 (473)
+++ ++|+|+.++ ..+++++.|.++|+++
T Consensus 290 ~l~-~~G~~~~~~---~~~~~~~~l~~~l~~~ 317 (318)
T PF13528_consen 290 KLE-ELGLGIVLS---QEDLTPERLAEFLERL 317 (318)
T ss_pred HHH-HCCCeEEcc---cccCCHHHHHHHHhcC
Confidence 999 559999998 8999999999999864
|
|
| >COG0707 MurG UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.92 E-value=2.1e-22 Score=192.64 Aligned_cols=312 Identities=19% Similarity=0.213 Sum_probs=200.8
Q ss_pred cEEEEEcCCCCCChHHHHHHHHHHHhCCC-eEEEEeCCCChhh-hhhhccCCCCCCeeEEEcCCCCCCCCCChhhHHHHH
Q 042753 6 AHILVYPFPTSGHIIPLLDLTNRLLTLGL-NVTVLITQNNLPL-LDSLNANHPSTSLQSLVLPQPKWPAGSPATRLLKFM 83 (473)
Q Consensus 6 ~~Il~~~~~~~GH~~p~l~La~~L~~rGh-~Vt~~~~~~~~~~-i~~~~~~~~~~~~~f~~l~~~~~~~~~~~~~~~~~~ 83 (473)
++|++...++-||+.|.++|+++|.++|+ +|.++.+....+. +... .++.+..++... +.....+..+.
T Consensus 1 ~~ivl~~gGTGGHv~pAlAl~~~l~~~g~~~v~~~~~~~~~e~~l~~~------~~~~~~~I~~~~---~~~~~~~~~~~ 71 (357)
T COG0707 1 KKIVLTAGGTGGHVFPALALAEELAKRGWEQVIVLGTGDGLEAFLVKQ------YGIEFELIPSGG---LRRKGSLKLLK 71 (357)
T ss_pred CeEEEEeCCCccchhHHHHHHHHHHhhCccEEEEecccccceeeeccc------cCceEEEEeccc---ccccCcHHHHH
Confidence 46788888899999999999999999999 6888866644332 2221 256666666322 12112222222
Q ss_pred HHHHH-HhhHHHHHHHhcCCCCCcEEEeCCCcc--hHHHHHHHhCCCcEEEecchHHHHHHHHhhhccCCCCCCCCCCCc
Q 042753 84 RVLRE-LHYPALLDWFKSHPSPPVAILSDFFLG--WTQGLAAELGLPRVVFSPSGAFALSVSFAMWTDLPTNDDPDNVDA 160 (473)
Q Consensus 84 ~~~~~-~~~~~l~~~l~~~~~~pD~VV~D~~~~--~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~ 160 (473)
..+.. ....+..++|++. +||+||.-.-+. .+..+|..+|||.+.--
T Consensus 72 ~~~~~~~~~~~a~~il~~~--kPd~vig~Ggyvs~P~~~Aa~~~~iPv~ihE---------------------------- 121 (357)
T COG0707 72 APFKLLKGVLQARKILKKL--KPDVVIGTGGYVSGPVGIAAKLLGIPVIIHE---------------------------- 121 (357)
T ss_pred HHHHHHHHHHHHHHHHHHc--CCCEEEecCCccccHHHHHHHhCCCCEEEEe----------------------------
Confidence 22221 2245668899999 999999854444 56688889999988731
Q ss_pred cccCCCCCCCCCCCccccchhhhccCCCCCchHHHHHHhhhccCCcEEeecchHHhhHHHHHHHHHhhCCCcEEEec-cC
Q 042753 161 LVSFPRVPNCPVYPWYQISHLYRTLKEGDPDWDLHRSNMMANKTSWGIVFNSFAELERVYIDHMKKEMGHDRVWAVG-PV 239 (473)
Q Consensus 161 ~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~le~~~~~~~~~~~~~~~~~~vG-pl 239 (473)
....||+.+ +++.+... ....+|++.+ ...+..++..+| |+
T Consensus 122 qn~~~G~an-----------------------k~~~~~a~-------~V~~~f~~~~--------~~~~~~~~~~tG~Pv 163 (357)
T COG0707 122 QNAVPGLAN-----------------------KILSKFAK-------KVASAFPKLE--------AGVKPENVVVTGIPV 163 (357)
T ss_pred cCCCcchhH-----------------------HHhHHhhc-------eeeecccccc--------ccCCCCceEEecCcc
Confidence 122333321 11111111 1222232211 001113588888 55
Q ss_pred CCCCCcchhhccCCCCCCCChhhhHHHhcCCCCCcEEEEEeCCcccCC-HHHHHHHHHHHHhCCCcEEEEEeCCCccCCc
Q 042753 240 LPPDDDLVESMCRGGSSSVPAHDVLTWLDSRRDESVVYVCFGSRYVLT-AKQIHELAAALEKTDVDFVYCVREPDERHAS 318 (473)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~V~vs~Gs~~~~~-~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~ 318 (473)
...- . . .+..-..+... .++++|+|.-||+.... .+.+...+..+.+ +..+++.++.+.
T Consensus 164 r~~~-~-----------~-~~~~~~~~~~~-~~~~~ilV~GGS~Ga~~ln~~v~~~~~~l~~-~~~v~~~~G~~~----- 223 (357)
T COG0707 164 RPEF-E-----------E-LPAAEVRKDGR-LDKKTILVTGGSQGAKALNDLVPEALAKLAN-RIQVIHQTGKND----- 223 (357)
T ss_pred cHHh-h-----------c-cchhhhhhhcc-CCCcEEEEECCcchhHHHHHHHHHHHHHhhh-CeEEEEEcCcch-----
Confidence 5544 1 1 12222222222 37899999999996532 2333334444444 578888888752
Q ss_pred ccCCCCchhhHHhhcCCC-eEeecCccHH-HhhhccCccceeeccCchhHHHHHhhCCeEecCccc----ccchhhHHHH
Q 042753 319 QDCGVLPDGFEDRVAGRG-YVIRGWSQQV-AILRHKAVGAFLTHCGWNSVLEGVSAGVVMLTWPMD----ADQYTNAQLL 392 (473)
Q Consensus 319 ~~~~~lp~~~~~~~~~~n-v~v~~~~pq~-~lL~~~~v~~~ItHgG~~s~~eal~~GvP~l~~P~~----~DQ~~na~rv 392 (473)
-+.........| +.+..|..+. ++|+.+++ +||++|.+|+.|+++.|+|+|.+|.. .||..||+.+
T Consensus 224 ------~~~~~~~~~~~~~~~v~~f~~dm~~~~~~ADL--vIsRaGa~Ti~E~~a~g~P~IliP~p~~~~~~Q~~NA~~l 295 (357)
T COG0707 224 ------LEELKSAYNELGVVRVLPFIDDMAALLAAADL--VISRAGALTIAELLALGVPAILVPYPPGADGHQEYNAKFL 295 (357)
T ss_pred ------HHHHHHHHhhcCcEEEeeHHhhHHHHHHhccE--EEeCCcccHHHHHHHhCCCEEEeCCCCCccchHHHHHHHH
Confidence 123333333344 7788888764 48888887 99999999999999999999999974 4899999999
Q ss_pred HHHhcceEEeccCCCCCCCHHHHHHHHHHHhCCc
Q 042753 393 VDQLGVGIRVGEGTRNIPESDELARLLAQSVDGP 426 (473)
Q Consensus 393 ~~~~G~G~~l~~~~~~~~~~~~l~~~i~~~l~~~ 426 (473)
+++ |+|..++ ..++|.+++.+.|.++++++
T Consensus 296 ~~~-gaa~~i~---~~~lt~~~l~~~i~~l~~~~ 325 (357)
T COG0707 296 EKA-GAALVIR---QSELTPEKLAELILRLLSNP 325 (357)
T ss_pred HhC-CCEEEec---cccCCHHHHHHHHHHHhcCH
Confidence 966 9999999 88999999999999999985
|
|
| >TIGR00661 MJ1255 conserved hypothetical protein | Back alignment and domain information |
|---|
Probab=99.90 E-value=7.6e-22 Score=189.95 Aligned_cols=307 Identities=16% Similarity=0.133 Sum_probs=173.7
Q ss_pred EEEEEc-CCCCCChHHHHHHHHHHHhCCCeEEEEeCCCChhhhhhhccCCCCCCee-EEEcCCCCCCCCCCh-hhHHHHH
Q 042753 7 HILVYP-FPTSGHIIPLLDLTNRLLTLGLNVTVLITQNNLPLLDSLNANHPSTSLQ-SLVLPQPKWPAGSPA-TRLLKFM 83 (473)
Q Consensus 7 ~Il~~~-~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~i~~~~~~~~~~~~~-f~~l~~~~~~~~~~~-~~~~~~~ 83 (473)
||++.. ..|.||+.|.++|+++|.+ ||+|+|+++......+... ++. +..+|.......... .....+.
T Consensus 1 ril~~~~g~G~GH~~r~~ala~~L~~-g~ev~~~~~~~~~~~~~~~-------~~~~~~~~p~~~~~~~~~~~~~~~~l~ 72 (321)
T TIGR00661 1 KILYSVCGEGFGHTTRSVAIGEALKN-DYEVSYIASGRSKNYISKY-------GFKVFETFPGIKLKGEDGKVNIVKTLR 72 (321)
T ss_pred CEEEEEeccCccHHHHHHHHHHHHhC-CCeEEEEEcCCHHHhhhhh-------cCcceeccCCceEeecCCcCcHHHHHH
Confidence 577766 4466999999999999999 9999999988744444443 222 222221000000000 1111111
Q ss_pred H--HHHHHhhHHHHHHHhcCCCCCcEEEeCCCcchHHHHHHHhCCCcEEEecchHHHHHHHHhhhccCCCCCCCCCCCcc
Q 042753 84 R--VLRELHYPALLDWFKSHPSPPVAILSDFFLGWTQGLAAELGLPRVVFSPSGAFALSVSFAMWTDLPTNDDPDNVDAL 161 (473)
Q Consensus 84 ~--~~~~~~~~~l~~~l~~~~~~pD~VV~D~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 161 (473)
. .+.........+++++. +||+||+| ..+.+..+|+.+|||++.+..+....
T Consensus 73 ~~~~~~~~~~~~~~~~l~~~--~pDlVi~d-~~~~~~~aA~~~~iP~i~i~~q~~~~----------------------- 126 (321)
T TIGR00661 73 NKEYSPKKAIRREINIIREY--NPDLIISD-FEYSTVVAAKLLKIPVICISNQNYTR----------------------- 126 (321)
T ss_pred hhccccHHHHHHHHHHHHhc--CCCEEEEC-CchHHHHHHHhcCCCEEEEecchhhc-----------------------
Confidence 0 11011233456788999 99999999 55667889999999999876532110
Q ss_pred ccCCCCCCCCCCCccccchhhhccCCCCCchHHHHHHhhhccC-CcEEeecchHHhhHHHHHHHHHhhCCCcEEEeccCC
Q 042753 162 VSFPRVPNCPVYPWYQISHLYRTLKEGDPDWDLHRSNMMANKT-SWGIVFNSFAELERVYIDHMKKEMGHDRVWAVGPVL 240 (473)
Q Consensus 162 ~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~s~~~le~~~~~~~~~~~~~~~~~~vGpl~ 240 (473)
.|+. . +. ......+....+.. ........+.... ... |. +.
T Consensus 127 --~~~~-----~--~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~--p~------~~ 168 (321)
T TIGR00661 127 --YPLK-----T--DL-------------IVYPTMAALRIFNERCERFIVPDYPFPY--------TIC--PK------II 168 (321)
T ss_pred --CCcc-----c--ch-------------hHHHHHHHHHHhccccceEeeecCCCCC--------CCC--cc------cc
Confidence 0100 0 00 00000001111111 1111111111000 000 10 00
Q ss_pred CCCCcchhhccCCCCCCCChhhhHHHhcCCCCCcEEEEEeCCcccCCHHHHHHHHHHHHhCCC-cEEEEEeCCCccCCcc
Q 042753 241 PPDDDLVESMCRGGSSSVPAHDVLTWLDSRRDESVVYVCFGSRYVLTAKQIHELAAALEKTDV-DFVYCVREPDERHASQ 319 (473)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~V~vs~Gs~~~~~~~~~~~~~~al~~~~~-~~i~~~~~~~~~~~~~ 319 (473)
... + + ........+|.. .+++.|+|.+|+... ..+++++++.+. .++ +.... .
T Consensus 169 ~~~-~-------~---~~~~~~~~~~~~--~~~~~iLv~~g~~~~------~~l~~~l~~~~~~~~i--~~~~~-----~ 222 (321)
T TIGR00661 169 KNM-E-------G---PLIRYDVDDVDN--YGEDYILVYIGFEYR------YKILELLGKIANVKFV--CYSYE-----V 222 (321)
T ss_pred ccC-C-------C---cccchhhhcccc--CCCCcEEEECCcCCH------HHHHHHHHhCCCeEEE--EeCCC-----C
Confidence 000 0 0 001111222322 256778888888542 345677776653 443 22321 0
Q ss_pred cCCCCchhhHHhhcCCCeEeecCcc--HHHhhhccCccceeeccCchhHHHHHhhCCeEecCcccc--cchhhHHHHHHH
Q 042753 320 DCGVLPDGFEDRVAGRGYVIRGWSQ--QVAILRHKAVGAFLTHCGWNSVLEGVSAGVVMLTWPMDA--DQYTNAQLLVDQ 395 (473)
Q Consensus 320 ~~~~lp~~~~~~~~~~nv~v~~~~p--q~~lL~~~~v~~~ItHgG~~s~~eal~~GvP~l~~P~~~--DQ~~na~rv~~~ 395 (473)
..+.+ .+|+.+.+|.| ..+.|+.+++ +|||||++|+.||+++|+|++++|... ||..||+.+++.
T Consensus 223 ~~~~~---------~~~v~~~~~~~~~~~~~l~~ad~--vI~~~G~~t~~Ea~~~g~P~l~ip~~~~~eQ~~na~~l~~~ 291 (321)
T TIGR00661 223 AKNSY---------NENVEIRRITTDNFKELIKNAEL--VITHGGFSLISEALSLGKPLIVIPDLGQFEQGNNAVKLEDL 291 (321)
T ss_pred Ccccc---------CCCEEEEECChHHHHHHHHhCCE--EEECCChHHHHHHHHcCCCEEEEcCCCcccHHHHHHHHHHC
Confidence 00112 26888889997 4567888886 999999999999999999999999955 899999999955
Q ss_pred hcceEEeccCCCCCCCHHHHHHHHHHHhCCcHHHH
Q 042753 396 LGVGIRVGEGTRNIPESDELARLLAQSVDGPRRER 430 (473)
Q Consensus 396 ~G~G~~l~~~~~~~~~~~~l~~~i~~~l~~~~~~~ 430 (473)
|+|+.++ ..++ ++.+++.++++|+ .|+
T Consensus 292 -g~~~~l~---~~~~---~~~~~~~~~~~~~-~~~ 318 (321)
T TIGR00661 292 -GCGIALE---YKEL---RLLEAILDIRNMK-RYK 318 (321)
T ss_pred -CCEEEcC---hhhH---HHHHHHHhccccc-ccc
Confidence 9999998 5555 6677777888886 664
|
This model represents nearly the full length of MJ1255 from Methanococcus jannaschii and of an unpublished protein from Vibrio cholerae, as well as the C-terminal half of a protein from Methanobacterium thermoautotrophicum. A small region (~50 amino acids) within the domain appears related to a family of sugar transferases. |
| >PRK00726 murG undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.86 E-value=5.6e-19 Score=173.22 Aligned_cols=343 Identities=19% Similarity=0.170 Sum_probs=205.1
Q ss_pred ccEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCCCCh--hhhhhhccCCCCCCeeEEEcCCCCCCCCCChhhHHHH
Q 042753 5 GAHILVYPFPTSGHIIPLLDLTNRLLTLGLNVTVLITQNNL--PLLDSLNANHPSTSLQSLVLPQPKWPAGSPATRLLKF 82 (473)
Q Consensus 5 ~~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~--~~i~~~~~~~~~~~~~f~~l~~~~~~~~~~~~~~~~~ 82 (473)
|+||++...+..||...++.|+++|.++||+|++++.+... ..++. .++++..++.+...+......+...
T Consensus 1 ~~~i~i~~~g~gG~~~~~~~la~~L~~~g~ev~vv~~~~~~~~~~~~~-------~g~~~~~~~~~~~~~~~~~~~l~~~ 73 (357)
T PRK00726 1 MKKILLAGGGTGGHVFPALALAEELKKRGWEVLYLGTARGMEARLVPK-------AGIEFHFIPSGGLRRKGSLANLKAP 73 (357)
T ss_pred CcEEEEEcCcchHhhhHHHHHHHHHHhCCCEEEEEECCCchhhhcccc-------CCCcEEEEeccCcCCCChHHHHHHH
Confidence 78999999888899999999999999999999999986521 11111 2566666654221111111111111
Q ss_pred HHHHHHHhhHHHHHHHhcCCCCCcEEEeCCCc--chHHHHHHHhCCCcEEEecchHHHHHHHHhhhccCCCCCCCCCCCc
Q 042753 83 MRVLRELHYPALLDWFKSHPSPPVAILSDFFL--GWTQGLAAELGLPRVVFSPSGAFALSVSFAMWTDLPTNDDPDNVDA 160 (473)
Q Consensus 83 ~~~~~~~~~~~l~~~l~~~~~~pD~VV~D~~~--~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~ 160 (473)
. ... .....+.+++++. +||+|++.... ..+..+++..++|+|..... .
T Consensus 74 ~-~~~-~~~~~~~~~ik~~--~pDvv~~~~~~~~~~~~~~~~~~~~p~v~~~~~-~------------------------ 124 (357)
T PRK00726 74 F-KLL-KGVLQARKILKRF--KPDVVVGFGGYVSGPGGLAARLLGIPLVIHEQN-A------------------------ 124 (357)
T ss_pred H-HHH-HHHHHHHHHHHhc--CCCEEEECCCcchhHHHHHHHHcCCCEEEEcCC-C------------------------
Confidence 1 111 2334567888888 99999999642 24456677889998863110 0
Q ss_pred cccCCCCCCCCCCCccccchhhhccCCCCCchHHHHHHhhhccCCcEEeecchHHhhHHHHHHHHHhhCCCcEEEeccCC
Q 042753 161 LVSFPRVPNCPVYPWYQISHLYRTLKEGDPDWDLHRSNMMANKTSWGIVFNSFAELERVYIDHMKKEMGHDRVWAVGPVL 240 (473)
Q Consensus 161 ~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~le~~~~~~~~~~~~~~~~~~vGpl~ 240 (473)
.++ . ..+++.+ ..+.++. +.++. ..+ .-+ .++.++|+-+
T Consensus 125 ---~~~--------------~---------~~r~~~~------~~d~ii~-~~~~~---~~~----~~~-~~i~vi~n~v 163 (357)
T PRK00726 125 ---VPG--------------L---------ANKLLAR------FAKKVAT-AFPGA---FPE----FFK-PKAVVTGNPV 163 (357)
T ss_pred ---Ccc--------------H---------HHHHHHH------HhchheE-Cchhh---hhc----cCC-CCEEEECCCC
Confidence 000 0 0011110 1111111 11111 000 112 5788888655
Q ss_pred CCCCcchhhccCCCCCCCChhhhHHHhcCCCCCcEEEEEeCCcccCCHHHHHHHHHHHHhCCC--cEEEEEeCCCccCCc
Q 042753 241 PPDDDLVESMCRGGSSSVPAHDVLTWLDSRRDESVVYVCFGSRYVLTAKQIHELAAALEKTDV--DFVYCVREPDERHAS 318 (473)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~V~vs~Gs~~~~~~~~~~~~~~al~~~~~--~~i~~~~~~~~~~~~ 318 (473)
... . ..... ....++...++++|++..|+... ......+.+++++... .++|.++...
T Consensus 164 ~~~-~-----------~~~~~-~~~~~~~~~~~~~i~~~gg~~~~--~~~~~~l~~a~~~~~~~~~~~~~~G~g~----- 223 (357)
T PRK00726 164 REE-I-----------LALAA-PPARLAGREGKPTLLVVGGSQGA--RVLNEAVPEALALLPEALQVIHQTGKGD----- 223 (357)
T ss_pred ChH-h-----------hcccc-hhhhccCCCCCeEEEEECCcHhH--HHHHHHHHHHHHHhhhCcEEEEEcCCCc-----
Confidence 443 1 00001 11112222345667665555421 1122223355554332 4556666642
Q ss_pred ccCCCCchhhHHhhc-CCCeEeecCc-cHHHhhhccCccceeeccCchhHHHHHhhCCeEecCcc----cccchhhHHHH
Q 042753 319 QDCGVLPDGFEDRVA-GRGYVIRGWS-QQVAILRHKAVGAFLTHCGWNSVLEGVSAGVVMLTWPM----DADQYTNAQLL 392 (473)
Q Consensus 319 ~~~~~lp~~~~~~~~-~~nv~v~~~~-pq~~lL~~~~v~~~ItHgG~~s~~eal~~GvP~l~~P~----~~DQ~~na~rv 392 (473)
. +.+.+... .-++.+.+|+ +..++++.+++ +|+|+|.++++||+++|+|+|++|. ..+|..++..+
T Consensus 224 -----~-~~~~~~~~~~~~v~~~g~~~~~~~~~~~~d~--~i~~~g~~~~~Ea~~~g~Pvv~~~~~~~~~~~~~~~~~~i 295 (357)
T PRK00726 224 -----L-EEVRAAYAAGINAEVVPFIDDMAAAYAAADL--VICRAGASTVAELAAAGLPAILVPLPHAADDHQTANARAL 295 (357)
T ss_pred -----H-HHHHHHhhcCCcEEEeehHhhHHHHHHhCCE--EEECCCHHHHHHHHHhCCCEEEecCCCCCcCcHHHHHHHH
Confidence 1 22322222 2237778998 45689999998 9999999999999999999999997 46899999999
Q ss_pred HHHhcceEEeccCCCCCCCHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHH
Q 042753 393 VDQLGVGIRVGEGTRNIPESDELARLLAQSVDGPRRERLKARELSGAALSAVVKGGSSDRDLNDFIKRI 461 (473)
Q Consensus 393 ~~~~G~G~~l~~~~~~~~~~~~l~~~i~~~l~~~~~~~~~a~~~~~~~~~~~~~~gs~~~~~~~~~~~~ 461 (473)
.+. |.|..+. .++++.+.|.++|.++++|+ +++++..+-+... ...++.++.++.+++.+
T Consensus 296 ~~~-~~g~~~~---~~~~~~~~l~~~i~~ll~~~-~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~ 355 (357)
T PRK00726 296 VDA-GAALLIP---QSDLTPEKLAEKLLELLSDP-ERLEAMAEAARAL----GKPDAAERLADLIEELA 355 (357)
T ss_pred HHC-CCEEEEE---cccCCHHHHHHHHHHHHcCH-HHHHHHHHHHHhc----CCcCHHHHHHHHHHHHh
Confidence 965 9999998 77788999999999999997 7776555544443 34455666666665544
|
|
| >cd03785 GT1_MurG MurG is an N-acetylglucosaminyltransferase, the last enzyme involved in the intracellular phase of peptidoglycan biosynthesis | Back alignment and domain information |
|---|
Probab=99.81 E-value=7e-17 Score=157.96 Aligned_cols=323 Identities=19% Similarity=0.179 Sum_probs=192.6
Q ss_pred EEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCCCChhhhhhhccCCCCCCeeEEEcCCCCCCCCCChhhHHHHHHHH
Q 042753 7 HILVYPFPTSGHIIPLLDLTNRLLTLGLNVTVLITQNNLPLLDSLNANHPSTSLQSLVLPQPKWPAGSPATRLLKFMRVL 86 (473)
Q Consensus 7 ~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~i~~~~~~~~~~~~~f~~l~~~~~~~~~~~~~~~~~~~~~ 86 (473)
||++...+..||......|++.|.++||+|++++....... . ... ..++++..++.....+......+..++..
T Consensus 1 ~~~~~~~~~gG~~~~~~~la~~l~~~G~ev~v~~~~~~~~~-~-~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 74 (350)
T cd03785 1 RILIAGGGTGGHIFPALALAEELRERGAEVLFLGTKRGLEA-R-LVP---KAGIPLHTIPVGGLRRKGSLKKLKAPFKL- 74 (350)
T ss_pred CEEEEecCchhhhhHHHHHHHHHHhCCCEEEEEECCCcchh-h-ccc---ccCCceEEEEecCcCCCChHHHHHHHHHH-
Confidence 58888888889999999999999999999999987643111 1 100 12466666664321111111111111111
Q ss_pred HHHhhHHHHHHHhcCCCCCcEEEeCCCcc--hHHHHHHHhCCCcEEEecchHHHHHHHHhhhccCCCCCCCCCCCccccC
Q 042753 87 RELHYPALLDWFKSHPSPPVAILSDFFLG--WTQGLAAELGLPRVVFSPSGAFALSVSFAMWTDLPTNDDPDNVDALVSF 164 (473)
Q Consensus 87 ~~~~~~~l~~~l~~~~~~pD~VV~D~~~~--~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~ 164 (473)
. .....+.+++++. +||+|++..... .+..+|...++|++..... . .
T Consensus 75 ~-~~~~~~~~~i~~~--~pDvI~~~~~~~~~~~~~~a~~~~~p~v~~~~~-~---------------------------~ 123 (350)
T cd03785 75 L-KGVLQARKILKKF--KPDVVVGFGGYVSGPVGLAAKLLGIPLVIHEQN-A---------------------------V 123 (350)
T ss_pred H-HHHHHHHHHHHhc--CCCEEEECCCCcchHHHHHHHHhCCCEEEEcCC-C---------------------------C
Confidence 1 2234567888888 999999875432 4567788889998753110 0 0
Q ss_pred CCCCCCCCCCccccchhhhccCCCCCchHHHHHHhhhccCCcEEeecchHHhhHHHHHHHHHhhCCCcEEEeccCCCCCC
Q 042753 165 PRVPNCPVYPWYQISHLYRTLKEGDPDWDLHRSNMMANKTSWGIVFNSFAELERVYIDHMKKEMGHDRVWAVGPVLPPDD 244 (473)
Q Consensus 165 p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~le~~~~~~~~~~~~~~~~~~vGpl~~~~~ 244 (473)
++ . ..+++ ....+.++..+-...+. ..+ .++.++|.-....
T Consensus 124 ~~--------------~---------~~~~~------~~~~~~vi~~s~~~~~~--------~~~-~~~~~i~n~v~~~- 164 (350)
T cd03785 124 PG--------------L---------ANRLL------ARFADRVALSFPETAKY--------FPK-DKAVVTGNPVREE- 164 (350)
T ss_pred cc--------------H---------HHHHH------HHhhCEEEEcchhhhhc--------CCC-CcEEEECCCCchH-
Confidence 00 0 00000 11123333333211111 112 5778888654433
Q ss_pred cchhhccCCCCCCCChhhhHHHhcCCCCCcEEEEEeCCcccCC-HHHHHHHHHHHHhCCCcEEEEEeCCCccCCcccCCC
Q 042753 245 DLVESMCRGGSSSVPAHDVLTWLDSRRDESVVYVCFGSRYVLT-AKQIHELAAALEKTDVDFVYCVREPDERHASQDCGV 323 (473)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~V~vs~Gs~~~~~-~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~ 323 (473)
. ....+. ...+....++++|++..|+..... .+.+..++..+.+.+..+++.++...
T Consensus 165 ~-----------~~~~~~-~~~~~~~~~~~~i~~~~g~~~~~~~~~~l~~a~~~l~~~~~~~~~i~G~g~---------- 222 (350)
T cd03785 165 I-----------LALDRE-RARLGLRPGKPTLLVFGGSQGARAINEAVPEALAELLRKRLQVIHQTGKGD---------- 222 (350)
T ss_pred H-----------hhhhhh-HHhcCCCCCCeEEEEECCcHhHHHHHHHHHHHHHHhhccCeEEEEEcCCcc----------
Confidence 1 000111 223333235566666666653211 12233344444433455666666531
Q ss_pred CchhhHHhhc--CCCeEeecCc-cHHHhhhccCccceeeccCchhHHHHHhhCCeEecCcc----cccchhhHHHHHHHh
Q 042753 324 LPDGFEDRVA--GRGYVIRGWS-QQVAILRHKAVGAFLTHCGWNSVLEGVSAGVVMLTWPM----DADQYTNAQLLVDQL 396 (473)
Q Consensus 324 lp~~~~~~~~--~~nv~v~~~~-pq~~lL~~~~v~~~ItHgG~~s~~eal~~GvP~l~~P~----~~DQ~~na~rv~~~~ 396 (473)
.+.+.+... ..|+++.+|+ ...++|+.+++ +|+++|.+++.||+++|+|+|++|. ..+|..++..+.+.
T Consensus 223 -~~~l~~~~~~~~~~v~~~g~~~~~~~~l~~ad~--~v~~sg~~t~~Eam~~G~Pvv~~~~~~~~~~~~~~~~~~l~~~- 298 (350)
T cd03785 223 -LEEVKKAYEELGVNYEVFPFIDDMAAAYAAADL--VISRAGASTVAELAALGLPAILIPLPYAADDHQTANARALVKA- 298 (350)
T ss_pred -HHHHHHHHhccCCCeEEeehhhhHHHHHHhcCE--EEECCCHhHHHHHHHhCCCEEEeecCCCCCCcHHHhHHHHHhC-
Confidence 122222222 3688888998 55679999997 9999999999999999999999986 46788999999955
Q ss_pred cceEEeccCCCCCCCHHHHHHHHHHHhCCcHHHHHHHHH
Q 042753 397 GVGIRVGEGTRNIPESDELARLLAQSVDGPRRERLKARE 435 (473)
Q Consensus 397 G~G~~l~~~~~~~~~~~~l~~~i~~~l~~~~~~~~~a~~ 435 (473)
|.|..++ ..+.+.++|.++|+++++|+ ..++...+
T Consensus 299 g~g~~v~---~~~~~~~~l~~~i~~ll~~~-~~~~~~~~ 333 (350)
T cd03785 299 GAAVLIP---QEELTPERLAAALLELLSDP-ERLKAMAE 333 (350)
T ss_pred CCEEEEe---cCCCCHHHHHHHHHHHhcCH-HHHHHHHH
Confidence 9999998 66678999999999999886 55544433
|
It transfers N-acetyl-D-glucosamine (GlcNAc) from UDP-GlcNAc to the C4 hydroxyl of a lipid-linked N-acetylmuramoyl pentapeptide (NAM). The resulting disaccharide is then transported across the cell membrane, where it is polymerized into NAG-NAM cell-wall repeat structure. MurG belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains, each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. |
| >TIGR01133 murG undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase | Back alignment and domain information |
|---|
Probab=99.75 E-value=1.4e-15 Score=148.58 Aligned_cols=317 Identities=18% Similarity=0.179 Sum_probs=176.3
Q ss_pred cEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCCCChh-hhhhhccCCCCCCeeEEEcCCCCCCCCCChhhHHHHHH
Q 042753 6 AHILVYPFPTSGHIIPLLDLTNRLLTLGLNVTVLITQNNLP-LLDSLNANHPSTSLQSLVLPQPKWPAGSPATRLLKFMR 84 (473)
Q Consensus 6 ~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~-~i~~~~~~~~~~~~~f~~l~~~~~~~~~~~~~~~~~~~ 84 (473)
|||+|++.+..||+.....|+++|.++||+|++++.+.... .+.. ..++++..++............+.....
T Consensus 1 ~~i~~~~g~~~g~~~~~~~La~~L~~~g~eV~vv~~~~~~~~~~~~------~~g~~~~~i~~~~~~~~~~~~~l~~~~~ 74 (348)
T TIGR01133 1 KKVVLAAGGTGGHIFPALAVAEELIKRGVEVLWLGTKRGLEKRLVP------KAGIEFYFIPVGGLRRKGSFRLIKTPLK 74 (348)
T ss_pred CeEEEEeCccHHHHhHHHHHHHHHHhCCCEEEEEeCCCcchhcccc------cCCCceEEEeccCcCCCChHHHHHHHHH
Confidence 38999999999999988899999999999999998753211 1101 0256666665422111111122211111
Q ss_pred HHHHHhhHHHHHHHhcCCCCCcEEEeCCCcc--hHHHHHHHhCCCcEEEecchHHHHHHHHhhhccCCCCCCCCCCCccc
Q 042753 85 VLRELHYPALLDWFKSHPSPPVAILSDFFLG--WTQGLAAELGLPRVVFSPSGAFALSVSFAMWTDLPTNDDPDNVDALV 162 (473)
Q Consensus 85 ~~~~~~~~~l~~~l~~~~~~pD~VV~D~~~~--~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 162 (473)
. . .....+.+++++. +||+|++..... .+..+++..++|.+... ....
T Consensus 75 ~-~-~~~~~l~~~i~~~--~pDvVi~~~~~~~~~~~~~~~~~~~p~v~~~-~~~~------------------------- 124 (348)
T TIGR01133 75 L-L-KAVFQARRILKKF--KPDAVIGFGGYVSGPAGLAAKLLGIPLFHHE-QNAV------------------------- 124 (348)
T ss_pred H-H-HHHHHHHHHHHhc--CCCEEEEcCCcccHHHHHHHHHcCCCEEEEC-CCCC-------------------------
Confidence 1 1 2334667889999 999999975433 34456788899987421 0000
Q ss_pred cCCCCCCCCCCCccccchhhhccCCCCCchHHHHHHhhhccCCcEEeecchHHhhHHHHHHHHHhhCCCcEEEeccCCCC
Q 042753 163 SFPRVPNCPVYPWYQISHLYRTLKEGDPDWDLHRSNMMANKTSWGIVFNSFAELERVYIDHMKKEMGHDRVWAVGPVLPP 242 (473)
Q Consensus 163 ~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~le~~~~~~~~~~~~~~~~~~vGpl~~~ 242 (473)
+ . . ..+++. +..+.++..+ ++.. ... ...++|.-+..
T Consensus 125 --~---~-----------~---------~~~~~~------~~~d~ii~~~-~~~~--------~~~---~~~~i~n~v~~ 161 (348)
T TIGR01133 125 --P---G-----------L---------TNKLLS------RFAKKVLISF-PGAK--------DHF---EAVLVGNPVRQ 161 (348)
T ss_pred --c---c-----------H---------HHHHHH------HHhCeeEECc-hhHh--------hcC---CceEEcCCcCH
Confidence 0 0 0 001110 1122222222 1111 000 22455532221
Q ss_pred CCcchhhccCCCCCCCChhhhHHHhcCCCCCcEEEEEeCCcccCCHHHHHHHHHHHH---hCCCcEEEEEeCCCccCCcc
Q 042753 243 DDDLVESMCRGGSSSVPAHDVLTWLDSRRDESVVYVCFGSRYVLTAKQIHELAAALE---KTDVDFVYCVREPDERHASQ 319 (473)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~V~vs~Gs~~~~~~~~~~~~~~al~---~~~~~~i~~~~~~~~~~~~~ 319 (473)
. . ...+.. .+++.-..++++|.+..|+... ......+.++++ +.+.++++..+...
T Consensus 162 ~-~-----------~~~~~~-~~~~~~~~~~~~i~~~gg~~~~--~~~~~~l~~a~~~l~~~~~~~~~~~g~~~------ 220 (348)
T TIGR01133 162 E-I-----------RSLPVP-RERFGLREGKPTILVLGGSQGA--KILNELVPKALAKLAEKGIQIVHQTGKND------ 220 (348)
T ss_pred H-H-----------hcccch-hhhcCCCCCCeEEEEECCchhH--HHHHHHHHHHHHHHhhcCcEEEEECCcch------
Confidence 1 0 000000 1122222244555444444432 222222334443 34456665444431
Q ss_pred cCCCCchhhHHhhcCCCe-EeecCc--cHHHhhhccCccceeeccCchhHHHHHhhCCeEecCccc---ccchhhHHHHH
Q 042753 320 DCGVLPDGFEDRVAGRGY-VIRGWS--QQVAILRHKAVGAFLTHCGWNSVLEGVSAGVVMLTWPMD---ADQYTNAQLLV 393 (473)
Q Consensus 320 ~~~~lp~~~~~~~~~~nv-~v~~~~--pq~~lL~~~~v~~~ItHgG~~s~~eal~~GvP~l~~P~~---~DQ~~na~rv~ 393 (473)
. +.+.+.....++ .++.|. +..++|+.+++ +|+++|.+++.||+++|+|+|++|.. .+|..|+..+.
T Consensus 221 ----~-~~l~~~~~~~~l~~~v~~~~~~~~~~l~~ad~--~v~~~g~~~l~Ea~~~g~Pvv~~~~~~~~~~~~~~~~~i~ 293 (348)
T TIGR01133 221 ----L-EKVKNVYQELGIEAIVTFIDENMAAAYAAADL--VISRAGASTVAELAAAGVPAILIPYPYAADDQYYNAKFLE 293 (348)
T ss_pred ----H-HHHHHHHhhCCceEEecCcccCHHHHHHhCCE--EEECCChhHHHHHHHcCCCEEEeeCCCCccchhhHHHHHH
Confidence 1 223322222221 122333 55778999997 99999988999999999999998863 46788888898
Q ss_pred HHhcceEEeccCCCCCCCHHHHHHHHHHHhCCcHHHHHHHH
Q 042753 394 DQLGVGIRVGEGTRNIPESDELARLLAQSVDGPRRERLKAR 434 (473)
Q Consensus 394 ~~~G~G~~l~~~~~~~~~~~~l~~~i~~~l~~~~~~~~~a~ 434 (473)
+. |.|..+. ..+.+.++|.++|+++++|+ +.+++..
T Consensus 294 ~~-~~G~~~~---~~~~~~~~l~~~i~~ll~~~-~~~~~~~ 329 (348)
T TIGR01133 294 DL-GAGLVIR---QKELLPEKLLEALLKLLLDP-ANLEAMA 329 (348)
T ss_pred HC-CCEEEEe---cccCCHHHHHHHHHHHHcCH-HHHHHHH
Confidence 54 9999988 67778999999999999986 6554433
|
RL J Bacteriol 1993 Mar;175(6):1841-3 |
| >TIGR00215 lpxB lipid-A-disaccharide synthase | Back alignment and domain information |
|---|
Probab=99.74 E-value=8.7e-16 Score=151.09 Aligned_cols=353 Identities=12% Similarity=0.030 Sum_probs=198.8
Q ss_pred ccEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCCCChhhhhhhccCCCCCCeeEEEcCCCCCCCCCChhhHHHHHH
Q 042753 5 GAHILVYPFPTSGHIIPLLDLTNRLLTLGLNVTVLITQNNLPLLDSLNANHPSTSLQSLVLPQPKWPAGSPATRLLKFMR 84 (473)
Q Consensus 5 ~~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~i~~~~~~~~~~~~~f~~l~~~~~~~~~~~~~~~~~~~ 84 (473)
-.||++...++.||+.|. +|+++|.++|++|+|++.... .+++.+.. ..+.+..++. .++. +.+..+..
T Consensus 5 ~~ki~i~aGgtsGhi~pa-al~~~l~~~~~~~~~~g~gg~--~m~~~g~~---~~~~~~~l~v---~G~~--~~l~~~~~ 73 (385)
T TIGR00215 5 IPTIALVAGEASGDILGA-GLRQQLKEHYPNARFIGVAGP--RMAAEGCE---VLYSMEELSV---MGLR--EVLGRLGR 73 (385)
T ss_pred CCeEEEEeCCccHHHHHH-HHHHHHHhcCCCcEEEEEccH--HHHhCcCc---cccChHHhhh---ccHH--HHHHHHHH
Confidence 368999999999999999 999999999999999997632 34443210 1233333321 1111 12222222
Q ss_pred HHHHHhhHHHHHHHhcCCCCCcEEEe-CCCcch--HHHHHHHhCCCcEEEec-chHHHHHHHHhhhccCCCCCCCCCCCc
Q 042753 85 VLRELHYPALLDWFKSHPSPPVAILS-DFFLGW--TQGLAAELGLPRVVFSP-SGAFALSVSFAMWTDLPTNDDPDNVDA 160 (473)
Q Consensus 85 ~~~~~~~~~l~~~l~~~~~~pD~VV~-D~~~~~--~~~~A~~~giP~v~~~~-~~~~~~~~~~~~~~~~p~~~~~~~~~~ 160 (473)
. . .......+++++. +||+||. |..... ....|+.+|||++.+.+ ..+.
T Consensus 74 ~-~-~~~~~~~~~l~~~--kPd~vi~~g~~~~~~~~a~aa~~~gip~v~~i~P~~wa----------------------- 126 (385)
T TIGR00215 74 L-L-KIRKEVVQLAKQA--KPDLLVGIDAPDFNLTKELKKKDPGIKIIYYISPQVWA----------------------- 126 (385)
T ss_pred H-H-HHHHHHHHHHHhc--CCCEEEEeCCCCccHHHHHHHhhCCCCEEEEeCCcHhh-----------------------
Confidence 2 2 2334778889999 9999996 532222 23478899999987531 1000
Q ss_pred cccCCCCCCCCCCCccccchhhhccCCCCCchHHHHHHhhhccCCcEEeecchHHhhHHHHHHHHHhhCCCcEEEec-cC
Q 042753 161 LVSFPRVPNCPVYPWYQISHLYRTLKEGDPDWDLHRSNMMANKTSWGIVFNSFAELERVYIDHMKKEMGHDRVWAVG-PV 239 (473)
Q Consensus 161 ~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~le~~~~~~~~~~~~~~~~~~vG-pl 239 (473)
|. .. ..+.+.+..+. ++-++ +.+... +.. .+ -+..++| |+
T Consensus 127 --------------w~-----------~~-~~r~l~~~~d~-------v~~~~-~~e~~~---~~~-~g-~~~~~vGnPv 167 (385)
T TIGR00215 127 --------------WR-----------KW-RAKKIEKATDF-------LLAIL-PFEKAF---YQK-KN-VPCRFVGHPL 167 (385)
T ss_pred --------------cC-----------cc-hHHHHHHHHhH-------hhccC-CCcHHH---HHh-cC-CCEEEECCch
Confidence 00 00 01111111111 11111 112211 111 22 3567899 44
Q ss_pred CCCCCcchhhccCCCCCCCChhhhHHHhcCCCCCcEEEEEeCCcccCCHHHHHHHHHHHHh---C--CCcEEEEEeCCCc
Q 042753 240 LPPDDDLVESMCRGGSSSVPAHDVLTWLDSRRDESVVYVCFGSRYVLTAKQIHELAAALEK---T--DVDFVYCVREPDE 314 (473)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~V~vs~Gs~~~~~~~~~~~~~~al~~---~--~~~~i~~~~~~~~ 314 (473)
.... . ..........+.+.-..++++|.+.-||....-......++++++. . +.++++......
T Consensus 168 ~~~~-~---------~~~~~~~~~r~~lgl~~~~~~Ilvl~GSR~aei~k~~~~ll~a~~~l~~~~p~~~~vi~~~~~~- 236 (385)
T TIGR00215 168 LDAI-P---------LYKPDRKSAREKLGIDHNGETLALLPGSRGSEVEKLFPLFLKAAQLLEQQEPDLRRVLPVVNFK- 236 (385)
T ss_pred hhhc-c---------ccCCCHHHHHHHcCCCCCCCEEEEECCCCHHHHHHhHHHHHHHHHHHHHhCCCeEEEEEeCCch-
Confidence 3332 1 0001222233333333467888888888754223344445544443 2 345555443321
Q ss_pred cCCcccCCCCchhhHHhhc-CCCeEeecCccHHHhhhccCccceeeccCchhHHHHHhhCCeEecC----cccc------
Q 042753 315 RHASQDCGVLPDGFEDRVA-GRGYVIRGWSQQVAILRHKAVGAFLTHCGWNSVLEGVSAGVVMLTW----PMDA------ 383 (473)
Q Consensus 315 ~~~~~~~~~lp~~~~~~~~-~~nv~v~~~~pq~~lL~~~~v~~~ItHgG~~s~~eal~~GvP~l~~----P~~~------ 383 (473)
. .+.+ +.+.+... ...+....+ ...++++.+++ +|+-+|..|+ |++++|+|+|++ |+..
T Consensus 237 ---~--~~~~-~~~~~~~~~~~~v~~~~~-~~~~~l~aADl--~V~~SGt~tl-Ea~a~G~P~Vv~yk~~pl~~~~~~~~ 306 (385)
T TIGR00215 237 ---R--RLQF-EQIKAEYGPDLQLHLIDG-DARKAMFAADA--ALLASGTAAL-EAALIKTPMVVGYRMKPLTFLIARRL 306 (385)
T ss_pred ---h--HHHH-HHHHHHhCCCCcEEEECc-hHHHHHHhCCE--EeecCCHHHH-HHHHcCCCEEEEEcCCHHHHHHHHHH
Confidence 0 0001 11111111 112333222 34568999997 9999999887 999999999999 7742
Q ss_pred ---cchhhHHHHHHHhcceEEeccCCCCCCCHHHHHHHHHHHhCCc---HHHHHHHHHHHHHHHHHHhcCCChHHHHHHH
Q 042753 384 ---DQYTNAQLLVDQLGVGIRVGEGTRNIPESDELARLLAQSVDGP---RRERLKARELSGAALSAVVKGGSSDRDLNDF 457 (473)
Q Consensus 384 ---DQ~~na~rv~~~~G~G~~l~~~~~~~~~~~~l~~~i~~~l~~~---~~~~~~a~~~~~~~~~~~~~~gs~~~~~~~~ 457 (473)
+|..|+..++.+ ++...+. +.+.|++.|.+.+.++++|+ .+++++..+--..+++...++|.++++.+.+
T Consensus 307 ~~~~~~~~~nil~~~-~~~pel~---q~~~~~~~l~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~a~~i 382 (385)
T TIGR00215 307 VKTDYISLPNILANR-LLVPELL---QEECTPHPLAIALLLLLENGLKAYKEMHRERQFFEELRQRIYCNADSERAAQAV 382 (385)
T ss_pred HcCCeeeccHHhcCC-ccchhhc---CCCCCHHHHHHHHHHHhcCCcccHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHH
Confidence 388899999967 9999988 88999999999999999873 0333333333333333335556677777766
Q ss_pred HH
Q 042753 458 IK 459 (473)
Q Consensus 458 ~~ 459 (473)
++
T Consensus 383 ~~ 384 (385)
T TIGR00215 383 LE 384 (385)
T ss_pred hh
Confidence 65
|
Lipid-A precursor biosynthesis producing lipid A disaccharide in a condensation reaction. transcribed as part of an operon including lpxA |
| >PRK13609 diacylglycerol glucosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.72 E-value=2.4e-15 Score=148.71 Aligned_cols=167 Identities=17% Similarity=0.290 Sum_probs=113.3
Q ss_pred CCCcEEEEEeCCcccCCHHHHHHHHHHHHhC-CCcEEEEEeCCCccCCcccCCCCchhhHHhhc--CCCeEeecCccHH-
Q 042753 271 RDESVVYVCFGSRYVLTAKQIHELAAALEKT-DVDFVYCVREPDERHASQDCGVLPDGFEDRVA--GRGYVIRGWSQQV- 346 (473)
Q Consensus 271 ~~~~~V~vs~Gs~~~~~~~~~~~~~~al~~~-~~~~i~~~~~~~~~~~~~~~~~lp~~~~~~~~--~~nv~v~~~~pq~- 346 (473)
.++++|++..|+.... ..+..+++++.+. +.+++++.+.+. .+-+.+++... ..|+.+.+|+++.
T Consensus 200 ~~~~~il~~~G~~~~~--k~~~~li~~l~~~~~~~~viv~G~~~---------~~~~~l~~~~~~~~~~v~~~g~~~~~~ 268 (380)
T PRK13609 200 PNKKILLIMAGAHGVL--GNVKELCQSLMSVPDLQVVVVCGKNE---------ALKQSLEDLQETNPDALKVFGYVENID 268 (380)
T ss_pred CCCcEEEEEcCCCCCC--cCHHHHHHHHhhCCCcEEEEEeCCCH---------HHHHHHHHHHhcCCCcEEEEechhhHH
Confidence 3567788877877532 2345577777654 567777766431 11122222211 2578888999874
Q ss_pred HhhhccCccceeeccCchhHHHHHhhCCeEecC-cccccchhhHHHHHHHhcceEEeccCCCCCCCHHHHHHHHHHHhCC
Q 042753 347 AILRHKAVGAFLTHCGWNSVLEGVSAGVVMLTW-PMDADQYTNAQLLVDQLGVGIRVGEGTRNIPESDELARLLAQSVDG 425 (473)
Q Consensus 347 ~lL~~~~v~~~ItHgG~~s~~eal~~GvP~l~~-P~~~DQ~~na~rv~~~~G~G~~l~~~~~~~~~~~~l~~~i~~~l~~ 425 (473)
+++..+++ +|+.+|..|+.||+++|+|+|+. |..+.|..|+..+.+. |+|+... +.++|.++|.++++|
T Consensus 269 ~l~~~aD~--~v~~~gg~t~~EA~a~g~PvI~~~~~~g~~~~n~~~~~~~-G~~~~~~-------~~~~l~~~i~~ll~~ 338 (380)
T PRK13609 269 ELFRVTSC--MITKPGGITLSEAAALGVPVILYKPVPGQEKENAMYFERK-GAAVVIR-------DDEEVFAKTEALLQD 338 (380)
T ss_pred HHHHhccE--EEeCCCchHHHHHHHhCCCEEECCCCCCcchHHHHHHHhC-CcEEEEC-------CHHHHHHHHHHHHCC
Confidence 79999997 99999988999999999999985 6777788899888855 8887654 578999999999998
Q ss_pred cHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHh
Q 042753 426 PRRERLKARELSGAALSAVVKGGSSDRDLNDFIKRINE 463 (473)
Q Consensus 426 ~~~~~~~a~~~~~~~~~~~~~~gs~~~~~~~~~~~~~~ 463 (473)
+ +.+++.. +..++. ....+.++.++.+++.+..
T Consensus 339 ~-~~~~~m~---~~~~~~-~~~~s~~~i~~~i~~~~~~ 371 (380)
T PRK13609 339 D-MKLLQMK---EAMKSL-YLPEPADHIVDDILAENHV 371 (380)
T ss_pred H-HHHHHHH---HHHHHh-CCCchHHHHHHHHHHhhhh
Confidence 6 5544333 333322 3334566666666665543
|
|
| >TIGR03590 PseG pseudaminic acid biosynthesis-associated protein PseG | Back alignment and domain information |
|---|
Probab=99.68 E-value=5.8e-15 Score=138.56 Aligned_cols=254 Identities=16% Similarity=0.121 Sum_probs=152.8
Q ss_pred CCCChHHHHHHHHHHHhCCCeEEEEeCCCChh---hhhhhccCCCCCCeeEEEcCCCCCCCCCChhhHHHHHHHHHHHhh
Q 042753 15 TSGHIIPLLDLTNRLLTLGLNVTVLITQNNLP---LLDSLNANHPSTSLQSLVLPQPKWPAGSPATRLLKFMRVLRELHY 91 (473)
Q Consensus 15 ~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~---~i~~~~~~~~~~~~~f~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (473)
|.||+..+++||++|.++||+|+|++...... .+++. ++....++.... .. .-.
T Consensus 13 G~GHv~Rcl~LA~~l~~~g~~v~f~~~~~~~~~~~~i~~~-------g~~v~~~~~~~~---------------~~-~d~ 69 (279)
T TIGR03590 13 GLGHVMRCLTLARALHAQGAEVAFACKPLPGDLIDLLLSA-------GFPVYELPDESS---------------RY-DDA 69 (279)
T ss_pred cccHHHHHHHHHHHHHHCCCEEEEEeCCCCHHHHHHHHHc-------CCeEEEecCCCc---------------hh-hhH
Confidence 67999999999999999999999999986543 33333 677776663211 01 112
Q ss_pred HHHHHHHhcCCCCCcEEEeCCCcchH--HHHHHHhCCCcEEEecchHHHHHHHHhhhccCCCCCCCCCCCccccCCCCCC
Q 042753 92 PALLDWFKSHPSPPVAILSDFFLGWT--QGLAAELGLPRVVFSPSGAFALSVSFAMWTDLPTNDDPDNVDALVSFPRVPN 169 (473)
Q Consensus 92 ~~l~~~l~~~~~~pD~VV~D~~~~~~--~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~p~l~~ 169 (473)
..+.+++++. +||+||+|.+.... ....+..+.+.+.+--.....
T Consensus 70 ~~~~~~l~~~--~~d~vV~D~y~~~~~~~~~~k~~~~~l~~iDD~~~~~------------------------------- 116 (279)
T TIGR03590 70 LELINLLEEE--KFDILIVDHYGLDADWEKLIKEFGRKILVIDDLADRP------------------------------- 116 (279)
T ss_pred HHHHHHHHhc--CCCEEEEcCCCCCHHHHHHHHHhCCeEEEEecCCCCC-------------------------------
Confidence 3467788888 99999999875422 233334566666542211000
Q ss_pred CCCCCccccchhhhccCCCCCchHHHHHHhhhccCCcEEeecchHHhhHHHHHHHHHhhCCCcEEEecc---CCCCCCcc
Q 042753 170 CPVYPWYQISHLYRTLKEGDPDWDLHRSNMMANKTSWGIVFNSFAELERVYIDHMKKEMGHDRVWAVGP---VLPPDDDL 246 (473)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~le~~~~~~~~~~~~~~~~~~vGp---l~~~~~~~ 246 (473)
. .++ ++++.-...+ ...+. ...+.......|| ++.+. -
T Consensus 117 ---~------------------------------~~D-~vin~~~~~~--~~~y~-~~~~~~~~~l~G~~Y~~lr~e-F- 157 (279)
T TIGR03590 117 ---H------------------------------DCD-LLLDQNLGAD--ASDYQ-GLVPANCRLLLGPSYALLREE-F- 157 (279)
T ss_pred ---c------------------------------CCC-EEEeCCCCcC--HhHhc-ccCcCCCeEEecchHHhhhHH-H-
Confidence 0 000 1111100000 00000 0001023456665 33222 0
Q ss_pred hhhccCCCCCCCChhhhHHHhcCCCCCcEEEEEeCCcccCCHHHHHHHHHHHHhC--CCcEEEEEeCCCccCCcccCCCC
Q 042753 247 VESMCRGGSSSVPAHDVLTWLDSRRDESVVYVCFGSRYVLTAKQIHELAAALEKT--DVDFVYCVREPDERHASQDCGVL 324 (473)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~V~vs~Gs~~~~~~~~~~~~~~al~~~--~~~~i~~~~~~~~~~~~~~~~~l 324 (473)
.... ..-..+...+.|+|++|...... ....++++|.+. +.++.++++... ..
T Consensus 158 ----------~~~~----~~~~~~~~~~~iLi~~GG~d~~~--~~~~~l~~l~~~~~~~~i~vv~G~~~---------~~ 212 (279)
T TIGR03590 158 ----------YQLA----TANKRRKPLRRVLVSFGGADPDN--LTLKLLSALAESQINISITLVTGSSN---------PN 212 (279)
T ss_pred ----------HHhh----HhhhcccccCeEEEEeCCcCCcC--HHHHHHHHHhccccCceEEEEECCCC---------cC
Confidence 0000 00001012467999999775422 455677777653 467888887752 22
Q ss_pred chhhHHhhc-CCCeEeecCccHH-HhhhccCccceeeccCchhHHHHHhhCCeEecCcccccchhhHHH
Q 042753 325 PDGFEDRVA-GRGYVIRGWSQQV-AILRHKAVGAFLTHCGWNSVLEGVSAGVVMLTWPMDADQYTNAQL 391 (473)
Q Consensus 325 p~~~~~~~~-~~nv~v~~~~pq~-~lL~~~~v~~~ItHgG~~s~~eal~~GvP~l~~P~~~DQ~~na~r 391 (473)
.+.+++... .+|+.+..++++. ++|+.+++ +|++|| +|+.|+++.|+|+|++|...+|..||+.
T Consensus 213 ~~~l~~~~~~~~~i~~~~~~~~m~~lm~~aDl--~Is~~G-~T~~E~~a~g~P~i~i~~~~nQ~~~a~~ 278 (279)
T TIGR03590 213 LDELKKFAKEYPNIILFIDVENMAELMNEADL--AIGAAG-STSWERCCLGLPSLAICLAENQQSNSQQ 278 (279)
T ss_pred HHHHHHHHHhCCCEEEEeCHHHHHHHHHHCCE--EEECCc-hHHHHHHHcCCCEEEEEecccHHHHhhh
Confidence 233433322 3588889999986 79999997 999999 9999999999999999999999999875
|
This protein is found in association with enzymes involved in the biosynthesis of pseudaminic acid, a component of polysaccharide in certain Pseudomonas strains as well as a modification of flagellin in Campylobacter and Hellicobacter. The role of this protein is unclear, although it may participate in N-acetylation in conjunction with, or in the absence of PseH (TIGR03585) as it often scores above the trusted cutoff to pfam00583 representing a family of acetyltransferases. |
| >COG4671 Predicted glycosyl transferase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.66 E-value=5.5e-14 Score=128.44 Aligned_cols=336 Identities=16% Similarity=0.113 Sum_probs=197.9
Q ss_pred ccEEEEEcC--CCCCChHHHHHHHHHHHhC--CCeEEEEeCCCChhhhhhhccCCCCCCeeEEEcCCCC--CCCCCChhh
Q 042753 5 GAHILVYPF--PTSGHIIPLLDLTNRLLTL--GLNVTVLITQNNLPLLDSLNANHPSTSLQSLVLPQPK--WPAGSPATR 78 (473)
Q Consensus 5 ~~~Il~~~~--~~~GH~~p~l~La~~L~~r--Gh~Vt~~~~~~~~~~i~~~~~~~~~~~~~f~~l~~~~--~~~~~~~~~ 78 (473)
++||+|++. .+.||+..+..+|+.|++. |.+|++++......-+... .+++|+.+|.-. .++......
T Consensus 9 ~~Ri~~Yshd~~GlGHlrR~~~Ia~aLv~d~~~~~Il~IsG~~~~~~F~~~------~gVd~V~LPsl~k~~~G~~~~~d 82 (400)
T COG4671 9 RPRILFYSHDLLGLGHLRRALRIAHALVEDYLGFDILIISGGPPAGGFPGP------AGVDFVKLPSLIKGDNGEYGLVD 82 (400)
T ss_pred cceEEEEehhhccchHHHHHHHHHHHHhhcccCceEEEEeCCCccCCCCCc------ccCceEecCceEecCCCceeeee
Confidence 679999994 5679999999999999997 9999999987544333321 479999888432 112111111
Q ss_pred HHHHHHHHHHHhhHHHHHHHhcCCCCCcEEEeCCCcchHHHHHHHhCCCcEEEecchHHHHHHHHhhhccCCCCCCCCCC
Q 042753 79 LLKFMRVLRELHYPALLDWFKSHPSPPVAILSDFFLGWTQGLAAELGLPRVVFSPSGAFALSVSFAMWTDLPTNDDPDNV 158 (473)
Q Consensus 79 ~~~~~~~~~~~~~~~l~~~l~~~~~~pD~VV~D~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~p~~~~~~~~ 158 (473)
...-...+.+.-.+-+...++.. +||++|+|.+-. |+. -+.. |. ..+...- .
T Consensus 83 ~~~~l~e~~~~Rs~lil~t~~~f--kPDi~IVd~~P~-Glr-~EL~--pt-----------L~yl~~~---------~-- 134 (400)
T COG4671 83 LDGDLEETKKLRSQLILSTAETF--KPDIFIVDKFPF-GLR-FELL--PT-----------LEYLKTT---------G-- 134 (400)
T ss_pred cCCCHHHHHHHHHHHHHHHHHhc--CCCEEEEecccc-chh-hhhh--HH-----------HHHHhhc---------C--
Confidence 10112233324456677778889 999999997743 310 1100 00 0000000 0
Q ss_pred CccccCCCCCCCCCCCccccchhhhccCCCCCchHHHHHHhhhccC-CcEEeecc---hHHhhHHHHHHHHHhhCCCcEE
Q 042753 159 DALVSFPRVPNCPVYPWYQISHLYRTLKEGDPDWDLHRSNMMANKT-SWGIVFNS---FAELERVYIDHMKKEMGHDRVW 234 (473)
Q Consensus 159 ~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~s---~~~le~~~~~~~~~~~~~~~~~ 234 (473)
++..+..+.+........ ..+.... ..+.+.+ .+.+++.. |.+++.. +++....- ..+.
T Consensus 135 ----------t~~vL~lr~i~D~p~~~~-~~w~~~~---~~~~I~r~yD~V~v~GdP~f~d~~~~-~~~~~~i~--~k~~ 197 (400)
T COG4671 135 ----------TRLVLGLRSIRDIPQELE-ADWRRAE---TVRLINRFYDLVLVYGDPDFYDPLTE-FPFAPAIR--AKMR 197 (400)
T ss_pred ----------CcceeehHhhhhchhhhc-cchhhhH---HHHHHHHhheEEEEecCccccChhhc-CCccHhhh--hhee
Confidence 000011111111111110 0001111 1112222 12333322 3333221 11111111 4789
Q ss_pred EeccCCCCCCcchhhccCCCCCCCChhhhHHHhcCCCCCcEEEEEeCCcccCCHHHHHHHHHHHHh-CCCc--EEEEEeC
Q 042753 235 AVGPVLPPDDDLVESMCRGGSSSVPAHDVLTWLDSRRDESVVYVCFGSRYVLTAKQIHELAAALEK-TDVD--FVYCVRE 311 (473)
Q Consensus 235 ~vGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~V~vs~Gs~~~~~~~~~~~~~~al~~-~~~~--~i~~~~~ 311 (473)
|+|.+ .+..+ .. ..+ |... +++.-|+||-|.-. ...+.+..+++|-.. .+.+ .+.+++.
T Consensus 198 ytG~v-q~~~~------~~-----~~p----~~~~-pE~~~Ilvs~GGG~-dG~eLi~~~l~A~~~l~~l~~~~~ivtGP 259 (400)
T COG4671 198 YTGFV-QRSLP------HL-----PLP----PHEA-PEGFDILVSVGGGA-DGAELIETALAAAQLLAGLNHKWLIVTGP 259 (400)
T ss_pred EeEEe-eccCc------CC-----CCC----CcCC-CccceEEEecCCCh-hhHHHHHHHHHHhhhCCCCCcceEEEeCC
Confidence 99988 33211 00 000 1111 35667999988864 456777777777654 3444 4444554
Q ss_pred CCccCCcccCCCCchhhHHhh-----cCCCeEeecCccHH-HhhhccCccceeeccCchhHHHHHhhCCeEecCccc---
Q 042753 312 PDERHASQDCGVLPDGFEDRV-----AGRGYVIRGWSQQV-AILRHKAVGAFLTHCGWNSVLEGVSAGVVMLTWPMD--- 382 (473)
Q Consensus 312 ~~~~~~~~~~~~lp~~~~~~~-----~~~nv~v~~~~pq~-~lL~~~~v~~~ItHgG~~s~~eal~~GvP~l~~P~~--- 382 (473)
. .|..-.++. +.+++.+..|-.+. ++|..++. +|+-||+||++|-|++|+|.+++|..
T Consensus 260 ~-----------MP~~~r~~l~~~A~~~p~i~I~~f~~~~~~ll~gA~~--vVSm~GYNTvCeILs~~k~aLivPr~~p~ 326 (400)
T COG4671 260 F-----------MPEAQRQKLLASAPKRPHISIFEFRNDFESLLAGARL--VVSMGGYNTVCEILSFGKPALIVPRAAPR 326 (400)
T ss_pred C-----------CCHHHHHHHHHhcccCCCeEEEEhhhhHHHHHHhhhe--eeecccchhhhHHHhCCCceEEeccCCCc
Confidence 3 554333322 24689999998765 47777776 99999999999999999999999985
Q ss_pred ccchhhHHHHHHHhcceEEeccCCCCCCCHHHHHHHHHHHhCCc
Q 042753 383 ADQYTNAQLLVDQLGVGIRVGEGTRNIPESDELARLLAQSVDGP 426 (473)
Q Consensus 383 ~DQ~~na~rv~~~~G~G~~l~~~~~~~~~~~~l~~~i~~~l~~~ 426 (473)
.+|-.-|.|++ ++|+.-.+- .++++++.+.++|...++.+
T Consensus 327 eEQliRA~Rl~-~LGL~dvL~---pe~lt~~~La~al~~~l~~P 366 (400)
T COG4671 327 EEQLIRAQRLE-ELGLVDVLL---PENLTPQNLADALKAALARP 366 (400)
T ss_pred HHHHHHHHHHH-hcCcceeeC---cccCChHHHHHHHHhcccCC
Confidence 49999999999 889988888 78999999999999999844
|
|
| >PRK13608 diacylglycerol glucosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.66 E-value=5.5e-14 Score=139.09 Aligned_cols=168 Identities=14% Similarity=0.254 Sum_probs=116.3
Q ss_pred CCCcEEEEEeCCcccCCHHHHHHHHHHHH-h-CCCcEEEEEeCCCccCCcccCCCCchhhHHhh-cCCCeEeecCccHH-
Q 042753 271 RDESVVYVCFGSRYVLTAKQIHELAAALE-K-TDVDFVYCVREPDERHASQDCGVLPDGFEDRV-AGRGYVIRGWSQQV- 346 (473)
Q Consensus 271 ~~~~~V~vs~Gs~~~~~~~~~~~~~~al~-~-~~~~~i~~~~~~~~~~~~~~~~~lp~~~~~~~-~~~nv~v~~~~pq~- 346 (473)
.++++|+++.|+... ...+..+++++. . .+.+++++.+.+. .+-+.+.+.. ...++.+.+|+.+.
T Consensus 200 ~~~~~ilv~~G~lg~--~k~~~~li~~~~~~~~~~~~vvv~G~~~---------~l~~~l~~~~~~~~~v~~~G~~~~~~ 268 (391)
T PRK13608 200 PDKQTILMSAGAFGV--SKGFDTMITDILAKSANAQVVMICGKSK---------ELKRSLTAKFKSNENVLILGYTKHMN 268 (391)
T ss_pred CCCCEEEEECCCccc--chhHHHHHHHHHhcCCCceEEEEcCCCH---------HHHHHHHHHhccCCCeEEEeccchHH
Confidence 357888998898752 233445555543 2 3456766666541 1112233222 23578888999654
Q ss_pred HhhhccCccceeeccCchhHHHHHhhCCeEecC-cccccchhhHHHHHHHhcceEEeccCCCCCCCHHHHHHHHHHHhCC
Q 042753 347 AILRHKAVGAFLTHCGWNSVLEGVSAGVVMLTW-PMDADQYTNAQLLVDQLGVGIRVGEGTRNIPESDELARLLAQSVDG 425 (473)
Q Consensus 347 ~lL~~~~v~~~ItHgG~~s~~eal~~GvP~l~~-P~~~DQ~~na~rv~~~~G~G~~l~~~~~~~~~~~~l~~~i~~~l~~ 425 (473)
++++.+++ +|+.+|..|+.||++.|+|+|+. |..+.|..|+..+.+. |+|+... +.+++.++|.++++|
T Consensus 269 ~~~~~aDl--~I~k~gg~tl~EA~a~G~PvI~~~~~pgqe~~N~~~~~~~-G~g~~~~-------~~~~l~~~i~~ll~~ 338 (391)
T PRK13608 269 EWMASSQL--MITKPGGITISEGLARCIPMIFLNPAPGQELENALYFEEK-GFGKIAD-------TPEEAIKIVASLTNG 338 (391)
T ss_pred HHHHhhhE--EEeCCchHHHHHHHHhCCCEEECCCCCCcchhHHHHHHhC-CcEEEeC-------CHHHHHHHHHHHhcC
Confidence 58999997 99998888999999999999998 7767778999999955 9998765 688899999999988
Q ss_pred cHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHhh
Q 042753 426 PRRERLKARELSGAALSAVVKGGSSDRDLNDFIKRINEL 464 (473)
Q Consensus 426 ~~~~~~~a~~~~~~~~~~~~~~gs~~~~~~~~~~~~~~~ 464 (473)
+ +.. +++++..++. ....+.++.++++++.+...
T Consensus 339 ~-~~~---~~m~~~~~~~-~~~~s~~~i~~~l~~l~~~~ 372 (391)
T PRK13608 339 N-EQL---TNMISTMEQD-KIKYATQTICRDLLDLIGHS 372 (391)
T ss_pred H-HHH---HHHHHHHHHh-cCCCCHHHHHHHHHHHhhhh
Confidence 6 433 3344444433 33466777777877776553
|
|
| >PRK00025 lpxB lipid-A-disaccharide synthase; Reviewed | Back alignment and domain information |
|---|
Probab=99.62 E-value=2.2e-13 Score=134.85 Aligned_cols=351 Identities=15% Similarity=0.093 Sum_probs=179.9
Q ss_pred ccEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCCCChhhhhhhccCCCCCCeeEEEcCCCCCCCCCChhhHHHHHH
Q 042753 5 GAHILVYPFPTSGHIIPLLDLTNRLLTLGLNVTVLITQNNLPLLDSLNANHPSTSLQSLVLPQPKWPAGSPATRLLKFMR 84 (473)
Q Consensus 5 ~~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~i~~~~~~~~~~~~~f~~l~~~~~~~~~~~~~~~~~~~ 84 (473)
|+||++...+..||+.|.. ++++|.++++++.+++.... .++....+ ..+.+..++. .++ ...+..+ .
T Consensus 1 ~~ki~i~~Ggt~G~i~~a~-l~~~L~~~~~~~~~~~~~~~--~~~~~~~~---~~~~~~~l~~---~g~--~~~~~~~-~ 68 (380)
T PRK00025 1 PLRIAIVAGEVSGDLLGAG-LIRALKARAPNLEFVGVGGP--RMQAAGCE---SLFDMEELAV---MGL--VEVLPRL-P 68 (380)
T ss_pred CceEEEEecCcCHHHHHHH-HHHHHHhcCCCcEEEEEccH--HHHhCCCc---cccCHHHhhh---ccH--HHHHHHH-H
Confidence 5699999999999999999 99999998888888875432 23332110 1222222221 010 0111111 1
Q ss_pred HHHHHhhHHHHHHHhcCCCCCcEEEeCCC-cchH--HHHHHHhCCCcEEEecchHHHHHHHHhhhccCCCCCCCCCCCcc
Q 042753 85 VLRELHYPALLDWFKSHPSPPVAILSDFF-LGWT--QGLAAELGLPRVVFSPSGAFALSVSFAMWTDLPTNDDPDNVDAL 161 (473)
Q Consensus 85 ~~~~~~~~~l~~~l~~~~~~pD~VV~D~~-~~~~--~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 161 (473)
... .....+.+++++. +||+|++-.. ..+. ...|++.|||++.+.....
T Consensus 69 ~~~-~~~~~~~~~l~~~--kPdivi~~~~~~~~~~~a~~a~~~~ip~i~~~~~~~------------------------- 120 (380)
T PRK00025 69 RLL-KIRRRLKRRLLAE--PPDVFIGIDAPDFNLRLEKKLRKAGIPTIHYVSPSV------------------------- 120 (380)
T ss_pred HHH-HHHHHHHHHHHHc--CCCEEEEeCCCCCCHHHHHHHHHCCCCEEEEeCCch-------------------------
Confidence 111 2345778899999 9999886322 2233 3446788999876422100
Q ss_pred ccCCCCCCCCCCCccccchhhhccCCCCCchHHHHHHhhhccCCcEEeecchHHhhHHHHHHHHHhhCCCcEEEec-cCC
Q 042753 162 VSFPRVPNCPVYPWYQISHLYRTLKEGDPDWDLHRSNMMANKTSWGIVFNSFAELERVYIDHMKKEMGHDRVWAVG-PVL 240 (473)
Q Consensus 162 ~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~le~~~~~~~~~~~~~~~~~~vG-pl~ 240 (473)
+.+ ......+. ....+.++..+ +. +... +.. .+ -.+.++| |+.
T Consensus 121 -----------~~~---------------~~~~~~~~---~~~~d~i~~~~-~~-~~~~---~~~-~g-~~~~~~G~p~~ 164 (380)
T PRK00025 121 -----------WAW---------------RQGRAFKI---AKATDHVLALF-PF-EAAF---YDK-LG-VPVTFVGHPLA 164 (380)
T ss_pred -----------hhc---------------CchHHHHH---HHHHhhheeCC-cc-CHHH---HHh-cC-CCeEEECcCHH
Confidence 000 00000000 11112222211 11 1111 111 22 2477888 333
Q ss_pred CCCCcchhhccCCCCCCCChhhhHHHhcCCCCCcEEEEEeCCcccCCHHHHHHHHHHHHh-----CCCcEEEEEeCCCcc
Q 042753 241 PPDDDLVESMCRGGSSSVPAHDVLTWLDSRRDESVVYVCFGSRYVLTAKQIHELAAALEK-----TDVDFVYCVREPDER 315 (473)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~V~vs~Gs~~~~~~~~~~~~~~al~~-----~~~~~i~~~~~~~~~ 315 (473)
... . .......+.+.+.-..++++|++..||...........++++++. .+.+++|+.+.+.
T Consensus 165 ~~~-~----------~~~~~~~~~~~l~~~~~~~~il~~~gsr~~~~~~~~~~l~~a~~~l~~~~~~~~~ii~~~~~~-- 231 (380)
T PRK00025 165 DAI-P----------LLPDRAAARARLGLDPDARVLALLPGSRGQEIKRLLPPFLKAAQLLQQRYPDLRFVLPLVNPK-- 231 (380)
T ss_pred Hhc-c----------cccChHHHHHHcCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHhCCCeEEEEecCChh--
Confidence 221 1 011123333334332345677777776543222233444554432 2346676655321
Q ss_pred CCcccCCCCchhhHHhhcC---CCeEeecCccHHHhhhccCccceeeccCchhHHHHHhhCCeEecCcccc--------c
Q 042753 316 HASQDCGVLPDGFEDRVAG---RGYVIRGWSQQVAILRHKAVGAFLTHCGWNSVLEGVSAGVVMLTWPMDA--------D 384 (473)
Q Consensus 316 ~~~~~~~~lp~~~~~~~~~---~nv~v~~~~pq~~lL~~~~v~~~ItHgG~~s~~eal~~GvP~l~~P~~~--------D 384 (473)
.-+.+.+.... -++.+.. -.-..+++.+++ +|+.+|.+++ ||+++|+|+|++|... .
T Consensus 232 --------~~~~~~~~~~~~~~~~v~~~~-~~~~~~~~~aDl--~v~~sG~~~l-Ea~a~G~PvI~~~~~~~~~~~~~~~ 299 (380)
T PRK00025 232 --------RREQIEEALAEYAGLEVTLLD-GQKREAMAAADA--ALAASGTVTL-ELALLKVPMVVGYKVSPLTFWIAKR 299 (380)
T ss_pred --------hHHHHHHHHhhcCCCCeEEEc-ccHHHHHHhCCE--EEECccHHHH-HHHHhCCCEEEEEccCHHHHHHHHH
Confidence 11223222221 1233322 123568899997 9999998877 9999999999885321 1
Q ss_pred chhh-----HHHHHHHhcceEEeccCCCCCCCHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHH
Q 042753 385 QYTN-----AQLLVDQLGVGIRVGEGTRNIPESDELARLLAQSVDGPRRERLKARELSGAALSAVVKGGSSDRDLNDFIK 459 (473)
Q Consensus 385 Q~~n-----a~rv~~~~G~G~~l~~~~~~~~~~~~l~~~i~~~l~~~~~~~~~a~~~~~~~~~~~~~~gs~~~~~~~~~~ 459 (473)
|..| +..+++. +++..+. ....+++.|.+++.++++|+ +.+++..+-.+.+.+.. ..+++++.++.+.+
T Consensus 300 ~~~~~~~~l~~~~~~~-~~~~~~~---~~~~~~~~l~~~i~~ll~~~-~~~~~~~~~~~~~~~~~-~~~a~~~~~~~i~~ 373 (380)
T PRK00025 300 LVKVPYVSLPNLLAGR-ELVPELL---QEEATPEKLARALLPLLADG-ARRQALLEGFTELHQQL-RCGADERAAQAVLE 373 (380)
T ss_pred HHcCCeeehHHHhcCC-Ccchhhc---CCCCCHHHHHHHHHHHhcCH-HHHHHHHHHHHHHHHHh-CCCHHHHHHHHHHH
Confidence 2111 2333322 3344455 56789999999999999997 55544333333333222 33556666666665
Q ss_pred HHH
Q 042753 460 RIN 462 (473)
Q Consensus 460 ~~~ 462 (473)
.+.
T Consensus 374 ~~~ 376 (380)
T PRK00025 374 LLK 376 (380)
T ss_pred Hhh
Confidence 544
|
|
| >PLN02605 monogalactosyldiacylglycerol synthase | Back alignment and domain information |
|---|
Probab=99.54 E-value=4e-12 Score=125.64 Aligned_cols=173 Identities=19% Similarity=0.174 Sum_probs=109.2
Q ss_pred hhhHHHhcCCCCCcEEEEEeCCcccCCHHHHHHHHHHHHh---------CCCcEEEEEeCCCccCCcccCCCCchhhHHh
Q 042753 261 HDVLTWLDSRRDESVVYVCFGSRYVLTAKQIHELAAALEK---------TDVDFVYCVREPDERHASQDCGVLPDGFEDR 331 (473)
Q Consensus 261 ~~~~~~l~~~~~~~~V~vs~Gs~~~~~~~~~~~~~~al~~---------~~~~~i~~~~~~~~~~~~~~~~~lp~~~~~~ 331 (473)
+.+.+-+.-.+++++|++..|+..... +..+++++.+ .+.+++++++.+. .+-+.+.+.
T Consensus 194 ~~~r~~~gl~~~~~~il~~Gg~~g~~~---~~~li~~l~~~~~~~~~~~~~~~~~vi~G~~~---------~~~~~L~~~ 261 (382)
T PLN02605 194 DELRRELGMDEDLPAVLLMGGGEGMGP---LEETARALGDSLYDKNLGKPIGQVVVICGRNK---------KLQSKLESR 261 (382)
T ss_pred HHHHHHcCCCCCCcEEEEECCCccccc---HHHHHHHHHHhhccccccCCCceEEEEECCCH---------HHHHHHHhh
Confidence 344444444345777877777654322 2223333322 3456677777541 111222222
Q ss_pred hcCCCeEeecCccH-HHhhhccCccceeeccCchhHHHHHhhCCeEecCcccccch-hhHHHHHHHhcceEEeccCCCCC
Q 042753 332 VAGRGYVIRGWSQQ-VAILRHKAVGAFLTHCGWNSVLEGVSAGVVMLTWPMDADQY-TNAQLLVDQLGVGIRVGEGTRNI 409 (473)
Q Consensus 332 ~~~~nv~v~~~~pq-~~lL~~~~v~~~ItHgG~~s~~eal~~GvP~l~~P~~~DQ~-~na~rv~~~~G~G~~l~~~~~~~ 409 (473)
....++.+.+|+++ .++++.+++ +|+.+|.+|+.||++.|+|+|+.+....|. .|+..+.+. |.|+...
T Consensus 262 ~~~~~v~~~G~~~~~~~l~~aaDv--~V~~~g~~ti~EAma~g~PvI~~~~~pgqe~gn~~~i~~~-g~g~~~~------ 332 (382)
T PLN02605 262 DWKIPVKVRGFVTNMEEWMGACDC--IITKAGPGTIAEALIRGLPIILNGYIPGQEEGNVPYVVDN-GFGAFSE------ 332 (382)
T ss_pred cccCCeEEEeccccHHHHHHhCCE--EEECCCcchHHHHHHcCCCEEEecCCCccchhhHHHHHhC-CceeecC------
Confidence 12346778899885 458899997 999999999999999999999988666665 688888855 9987553
Q ss_pred CCHHHHHHHHHHHhCC-cHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHH
Q 042753 410 PESDELARLLAQSVDG-PRRERLKARELSGAALSAVVKGGSSDRDLNDFIKR 460 (473)
Q Consensus 410 ~~~~~l~~~i~~~l~~-~~~~~~~a~~~~~~~~~~~~~~gs~~~~~~~~~~~ 460 (473)
+.++|.++|.+++.+ + +.+ +++++..++. ....++++.++.+++.
T Consensus 333 -~~~~la~~i~~ll~~~~-~~~---~~m~~~~~~~-~~~~a~~~i~~~l~~~ 378 (382)
T PLN02605 333 -SPKEIARIVAEWFGDKS-DEL---EAMSENALKL-ARPEAVFDIVHDLHEL 378 (382)
T ss_pred -CHHHHHHHHHHHHcCCH-HHH---HHHHHHHHHh-cCCchHHHHHHHHHHH
Confidence 689999999999987 4 333 3344444332 2334455555555544
|
|
| >PF04101 Glyco_tran_28_C: Glycosyltransferase family 28 C-terminal domain; InterPro: IPR007235 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.48 E-value=2.8e-15 Score=130.07 Aligned_cols=137 Identities=16% Similarity=0.274 Sum_probs=97.8
Q ss_pred EEEEEeCCcccCC-HHHHHHHHHHHHh--CCCcEEEEEeCCCccCCcccCCCCchhhHHhhcCCCeEeecCcc-HHHhhh
Q 042753 275 VVYVCFGSRYVLT-AKQIHELAAALEK--TDVDFVYCVREPDERHASQDCGVLPDGFEDRVAGRGYVIRGWSQ-QVAILR 350 (473)
Q Consensus 275 ~V~vs~Gs~~~~~-~~~~~~~~~al~~--~~~~~i~~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~v~~~~p-q~~lL~ 350 (473)
+|+|+.||..... ...+..+...+.. .+.+++++++... . +.....+.+ ...++.+.+|++ ..+++.
T Consensus 1 tilv~gGs~g~~~l~~~v~~~~~~~~~~~~~~~viv~~G~~~----~---~~~~~~~~~--~~~~v~~~~~~~~m~~~m~ 71 (167)
T PF04101_consen 1 TILVTGGSQGARDLNRLVLKILELLAEKHKNIQVIVQTGKNN----Y---EELKIKVEN--FNPNVKVFGFVDNMAELMA 71 (167)
T ss_dssp -EEEEETTTSHHHHHCCCCCHHHHHHHHHHHCCCCCCCTTCE----C---HHHCCCHCC--TTCCCEEECSSSSHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHHHHhhcCCCcEEEEEECCCc----H---HHHHHHHhc--cCCcEEEEechhhHHHHHH
Confidence 5899999875321 1112223333333 3578888988753 0 111111100 115788999999 788999
Q ss_pred ccCccceeeccCchhHHHHHhhCCeEecCcccc----cchhhHHHHHHHhcceEEeccCCCCCCCHHHHHHHHHHHhCCc
Q 042753 351 HKAVGAFLTHCGWNSVLEGVSAGVVMLTWPMDA----DQYTNAQLLVDQLGVGIRVGEGTRNIPESDELARLLAQSVDGP 426 (473)
Q Consensus 351 ~~~v~~~ItHgG~~s~~eal~~GvP~l~~P~~~----DQ~~na~rv~~~~G~G~~l~~~~~~~~~~~~l~~~i~~~l~~~ 426 (473)
.+++ +|||||.||+.|++++|+|+|++|... +|..||..+++. |+|+.+. ....+.+.|.++|.++++++
T Consensus 72 ~aDl--vIs~aG~~Ti~E~l~~g~P~I~ip~~~~~~~~q~~na~~~~~~-g~~~~~~---~~~~~~~~L~~~i~~l~~~~ 145 (167)
T PF04101_consen 72 AADL--VISHAGAGTIAEALALGKPAIVIPLPGAADNHQEENAKELAKK-GAAIMLD---ESELNPEELAEAIEELLSDP 145 (167)
T ss_dssp HHSE--EEECS-CHHHHHHHHCT--EEEE--TTT-T-CHHHHHHHHHHC-CCCCCSE---CCC-SCCCHHHHHHCHCCCH
T ss_pred HcCE--EEeCCCccHHHHHHHcCCCeeccCCCCcchHHHHHHHHHHHHc-CCccccC---cccCCHHHHHHHHHHHHcCc
Confidence 9998 999999999999999999999999998 999999999965 9999999 77888999999999999987
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC). Structural analysis suggests the C-terminal domain contains the UDP-GlcNAc binding site.; GO: 0016758 transferase activity, transferring hexosyl groups, 0030246 carbohydrate binding, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2KS6_A 2JZC_A 1NLM_B 1F0K_B. |
| >TIGR03492 conserved hypothetical protein | Back alignment and domain information |
|---|
Probab=99.44 E-value=1.2e-10 Score=114.78 Aligned_cols=351 Identities=16% Similarity=0.135 Sum_probs=183.0
Q ss_pred CCCChHHHHHHHHHHHh--CCCeEE---EEeCCCChhhhhhhccCCCCCCeeEEEcCCCCCCCCCCh---hhHHHHHH-H
Q 042753 15 TSGHIIPLLDLTNRLLT--LGLNVT---VLITQNNLPLLDSLNANHPSTSLQSLVLPQPKWPAGSPA---TRLLKFMR-V 85 (473)
Q Consensus 15 ~~GH~~p~l~La~~L~~--rGh~Vt---~~~~~~~~~~i~~~~~~~~~~~~~f~~l~~~~~~~~~~~---~~~~~~~~-~ 85 (473)
+.|-=.-.++||++|.+ .|++|. |+++..-.+ +...+. .+ .+..+|. .++... ..+..... .
T Consensus 6 ghged~~a~ai~~~l~~~~~~~~v~~~p~vG~~~~~e---~~~ip~--~g-~~~~~~s---gg~~~~~~~~~~~~~~~gl 76 (396)
T TIGR03492 6 GHGEDLIAARIAKALLQLSPDLNLEALPLVGEGRAYQ---NLGIPI--IG-PTKELPS---GGFSYQSLRGLLRDLRAGL 76 (396)
T ss_pred CchHHHHHHHHHHHHHhhCCCCCeEEeCcccCCHHHh---hCCCce--eC-CCCCCCC---CCccCCCHHHHHHHHHhhH
Confidence 44555567889999998 699999 999884432 211100 02 3333332 223211 11222222 1
Q ss_pred HHHHhhHHHHHHHhcCCCCCcEEEeCCCcchHHHHHHHhCCCcEEEecchHHHHHHHHhhhccCCCCCCCCCCCccccCC
Q 042753 86 LRELHYPALLDWFKSHPSPPVAILSDFFLGWTQGLAAELGLPRVVFSPSGAFALSVSFAMWTDLPTNDDPDNVDALVSFP 165 (473)
Q Consensus 86 ~~~~~~~~l~~~l~~~~~~pD~VV~D~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~p 165 (473)
.. ...+. ..+++++..+||+||.---+. .+.+|...|+|++.+.+.-.- +.+... +
T Consensus 77 ~~-~~~~~-~~~~~~~~~~p~~v~~~Gg~v-~~~aA~~~~~p~~~~~~~esn------~~~~~~---------------~ 132 (396)
T TIGR03492 77 VG-LTLGQ-WRALRKWAKKGDLIVAVGDIV-PLLFAWLSGKPYAFVGTAKSD------YYWESG---------------P 132 (396)
T ss_pred HH-HHHHH-HHHHHHHhhcCCEEEEECcHH-HHHHHHHcCCCceEEEeeccc------eeecCC---------------C
Confidence 11 22222 223333322789998655444 788899999999986544210 000000 0
Q ss_pred CCCCCCCCCccccchhhhccCCCCCchHHHHHHhhhc-cCCcEEeecchHHhhHHHHHHHHHhhCCCcEEEec-cCCCCC
Q 042753 166 RVPNCPVYPWYQISHLYRTLKEGDPDWDLHRSNMMAN-KTSWGIVFNSFAELERVYIDHMKKEMGHDRVWAVG-PVLPPD 243 (473)
Q Consensus 166 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~s~~~le~~~~~~~~~~~~~~~~~~vG-pl~~~~ 243 (473)
+.+ ..+++.... .. .+..+ +..... ..+..+...+ +.... .+.. .+ -++.++| |+...-
T Consensus 133 ~~~---------~~~~~~~~~-G~-~~~p~-e~n~l~~~~a~~v~~~~--~~t~~---~l~~-~g-~k~~~vGnPv~d~l 193 (396)
T TIGR03492 133 RRS---------PSDEYHRLE-GS-LYLPW-ERWLMRSRRCLAVFVRD--RLTAR---DLRR-QG-VRASYLGNPMMDGL 193 (396)
T ss_pred CCc---------cchhhhccC-CC-ccCHH-HHHHhhchhhCEEeCCC--HHHHH---HHHH-CC-CeEEEeCcCHHhcC
Confidence 000 000011000 00 11111 111122 2233333222 22222 2222 23 4799999 666554
Q ss_pred CcchhhccCCCCCCCChhhhHHHhcCCCCCcEEEEEeCCcccCCHHHHHHHHHHHHh----CCCcEEEEEeCCCccCCcc
Q 042753 244 DDLVESMCRGGSSSVPAHDVLTWLDSRRDESVVYVCFGSRYVLTAKQIHELAAALEK----TDVDFVYCVREPDERHASQ 319 (473)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~V~vs~Gs~~~~~~~~~~~~~~al~~----~~~~~i~~~~~~~~~~~~~ 319 (473)
. ..... -++ .++++|.+--||...-....+..++++++. .+..|++.+..+.
T Consensus 194 -~-----------~~~~~----~l~--~~~~~lllLpGSR~ae~~~~lp~~l~al~~L~~~~~~~~v~~~~~~~------ 249 (396)
T TIGR03492 194 -E-----------PPERK----PLL--TGRFRIALLPGSRPPEAYRNLKLLLRALEALPDSQPFVFLAAIVPSL------ 249 (396)
T ss_pred -c-----------ccccc----ccC--CCCCEEEEECCCCHHHHHccHHHHHHHHHHHhhCCCeEEEEEeCCCC------
Confidence 2 00101 122 356789998999854333334445555544 3567888773321
Q ss_pred cCCCCchhhHHhhc------------------CCCeEeecCc-cHHHhhhccCccceeeccCchhHHHHHhhCCeEecCc
Q 042753 320 DCGVLPDGFEDRVA------------------GRGYVIRGWS-QQVAILRHKAVGAFLTHCGWNSVLEGVSAGVVMLTWP 380 (473)
Q Consensus 320 ~~~~lp~~~~~~~~------------------~~nv~v~~~~-pq~~lL~~~~v~~~ItHgG~~s~~eal~~GvP~l~~P 380 (473)
+ . +.+.+... .+++.+..+. ...++++.+++ +|+-+|..| .|+...|+|+|++|
T Consensus 250 --~-~-~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~ADl--vI~rSGt~T-~E~a~lg~P~Ilip 322 (396)
T TIGR03492 250 --S-L-EKLQAILEDLGWQLEGSSEDQTSLFQKGTLEVLLGRGAFAEILHWADL--GIAMAGTAT-EQAVGLGKPVIQLP 322 (396)
T ss_pred --C-H-HHHHHHHHhcCceecCCccccchhhccCceEEEechHhHHHHHHhCCE--EEECcCHHH-HHHHHhCCCEEEEe
Confidence 0 1 11211111 1234444444 34668999997 999999766 99999999999999
Q ss_pred ccccchhhHHHHHHH---hcceEEeccCCCCCCCHHHHHHHHHHHhCCcHHHHHHHH-HHHHHHHHHHhcCCChHHHHHH
Q 042753 381 MDADQYTNAQLLVDQ---LGVGIRVGEGTRNIPESDELARLLAQSVDGPRRERLKAR-ELSGAALSAVVKGGSSDRDLND 456 (473)
Q Consensus 381 ~~~DQ~~na~rv~~~---~G~G~~l~~~~~~~~~~~~l~~~i~~~l~~~~~~~~~a~-~~~~~~~~~~~~~gs~~~~~~~ 456 (473)
....|. |+...++. .|.++.+. ..+.+.|.+++.++++|+ +..++.. ..+..+ ..++++++.++.
T Consensus 323 ~~~~q~-na~~~~~~~~l~g~~~~l~-----~~~~~~l~~~l~~ll~d~-~~~~~~~~~~~~~l----g~~~a~~~ia~~ 391 (396)
T TIGR03492 323 GKGPQF-TYGFAEAQSRLLGGSVFLA-----SKNPEQAAQVVRQLLADP-ELLERCRRNGQERM----GPPGASARIAES 391 (396)
T ss_pred CCCCHH-HHHHHHhhHhhcCCEEecC-----CCCHHHHHHHHHHHHcCH-HHHHHHHHHHHHhc----CCCCHHHHHHHH
Confidence 877776 88766631 26666665 345599999999999986 5554444 333333 344555555555
Q ss_pred HHH
Q 042753 457 FIK 459 (473)
Q Consensus 457 ~~~ 459 (473)
+.+
T Consensus 392 i~~ 394 (396)
T TIGR03492 392 ILK 394 (396)
T ss_pred HHH
Confidence 544
|
This protein family is restricted to the Cyanobacteria, in one or two copies, save for instances in the genus Deinococcus. This protein shows some sequence similarity, especially toward the C-terminus, to lipid-A-disaccharide synthase (TIGR00215 or pfam02684). The function is unknown. |
| >cd03814 GT1_like_2 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.40 E-value=1.3e-09 Score=106.47 Aligned_cols=346 Identities=14% Similarity=0.092 Sum_probs=179.4
Q ss_pred EEEEEc---CCC-CCChHHHHHHHHHHHhCCCeEEEEeCCCChhhhhhhccCCCCCCeeEEEcCCCCCCCCCChhhHHHH
Q 042753 7 HILVYP---FPT-SGHIIPLLDLTNRLLTLGLNVTVLITQNNLPLLDSLNANHPSTSLQSLVLPQPKWPAGSPATRLLKF 82 (473)
Q Consensus 7 ~Il~~~---~~~-~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~i~~~~~~~~~~~~~f~~l~~~~~~~~~~~~~~~~~ 82 (473)
||++++ .|. .|+...+..|+++|.++||+|++++.......-... ....+.....+...... . .
T Consensus 1 kIl~i~~~~~p~~~G~~~~~~~l~~~L~~~g~~v~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~--~----~ 68 (364)
T cd03814 1 RIAIVTDTFLPQVNGVVRTLQRLVEHLRARGHEVLVIAPGPFRESEGPA------RVVPVPSVPLPGYPEIR--L----A 68 (364)
T ss_pred CeEEEecccCccccceehHHHHHHHHHHHCCCEEEEEeCCchhhccCCC------CceeecccccCcccceE--e----c
Confidence 465544 233 699999999999999999999999987432111000 01111111111000000 0 0
Q ss_pred HHHHHHHhhHHHHHHHhcCCCCCcEEEeCCCcc---hHHHHHHHhCCCcEEEecchHHHHHHHHhhhccCCCCCCCCCCC
Q 042753 83 MRVLRELHYPALLDWFKSHPSPPVAILSDFFLG---WTQGLAAELGLPRVVFSPSGAFALSVSFAMWTDLPTNDDPDNVD 159 (473)
Q Consensus 83 ~~~~~~~~~~~l~~~l~~~~~~pD~VV~D~~~~---~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 159 (473)
. .....+.+.++.. +||+|++..... .+..++++.++|++.......... . ..
T Consensus 69 ~-----~~~~~~~~~~~~~--~pdii~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~--~~-------------- 124 (364)
T cd03814 69 L-----PPRRRVRRLLDAF--APDVVHIATPGPLGLAALRAARRLGIPVVTSYHTDFPEY-L--RY-------------- 124 (364)
T ss_pred c-----cchhhHHHHHHhc--CCCEEEEeccchhhHHHHHHHHHcCCCEEEEEecChHHH-h--hh--------------
Confidence 0 1123455566778 999998775433 345777889999887544322110 0 00
Q ss_pred ccccCCCCCCCCCCCccccchhhhccCCCCCchHHHHHHh-hhccCCcEEeecchHHhhHHHHHHHHHhhCCCcEEEecc
Q 042753 160 ALVSFPRVPNCPVYPWYQISHLYRTLKEGDPDWDLHRSNM-MANKTSWGIVFNSFAELERVYIDHMKKEMGHDRVWAVGP 238 (473)
Q Consensus 160 ~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~s~~~le~~~~~~~~~~~~~~~~~~vGp 238 (473)
.. ............ ......+.++..+-...+ .+..... +++..+.+
T Consensus 125 -------~~-------------------~~~~~~~~~~~~~~~~~~~d~i~~~s~~~~~-----~~~~~~~-~~~~~~~~ 172 (364)
T cd03814 125 -------YG-------------------LGPLSWLAWAYLRWFHNRADRVLVPSPSLAD-----ELRARGF-RRVRLWPR 172 (364)
T ss_pred -------cc-------------------cchHhHhhHHHHHHHHHhCCEEEeCCHHHHH-----HHhccCC-CceeecCC
Confidence 00 000001101111 122344555555543322 1111111 34554443
Q ss_pred CCCCCCcchhhccCCCCCCCChhhhHHHhcCCCCCcEEEEEeCCccc-CCHHHHHHHHHHHHhC-CCcEEEEEeCCCccC
Q 042753 239 VLPPDDDLVESMCRGGSSSVPAHDVLTWLDSRRDESVVYVCFGSRYV-LTAKQIHELAAALEKT-DVDFVYCVREPDERH 316 (473)
Q Consensus 239 l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~V~vs~Gs~~~-~~~~~~~~~~~al~~~-~~~~i~~~~~~~~~~ 316 (473)
-.... . .... .........+ . ..++.+++..|+... ...+.+.+++..+.+. +.+++ .++...
T Consensus 173 g~~~~-~----~~~~---~~~~~~~~~~-~--~~~~~~i~~~G~~~~~k~~~~~i~~~~~l~~~~~~~l~-i~G~~~--- 237 (364)
T cd03814 173 GVDTE-L----FHPR---RRDEALRARL-G--PPDRPVLLYVGRLAPEKNLEALLDADLPLRRRPPVRLV-IVGDGP--- 237 (364)
T ss_pred Ccccc-c----cCcc---cccHHHHHHh-C--CCCCeEEEEEeccccccCHHHHHHHHHHhhhcCCceEE-EEeCCc---
Confidence 33222 1 0000 1111112222 2 234567777887643 2334444444444332 34444 344321
Q ss_pred CcccCCCCchhhHHhhcCCCeEeecCccHHH---hhhccCccceeeccC----chhHHHHHhhCCeEecCcccccchhhH
Q 042753 317 ASQDCGVLPDGFEDRVAGRGYVIRGWSQQVA---ILRHKAVGAFLTHCG----WNSVLEGVSAGVVMLTWPMDADQYTNA 389 (473)
Q Consensus 317 ~~~~~~~lp~~~~~~~~~~nv~v~~~~pq~~---lL~~~~v~~~ItHgG----~~s~~eal~~GvP~l~~P~~~DQ~~na 389 (473)
. .+.+. ....|+.+.+|+++.+ ++..+++ +|..+. .++++||+++|+|+|+.+..+ +.
T Consensus 238 -----~--~~~~~--~~~~~v~~~g~~~~~~~~~~~~~~d~--~l~~s~~e~~~~~~lEa~a~g~PvI~~~~~~----~~ 302 (364)
T cd03814 238 -----A--RARLE--ARYPNVHFLGFLDGEELAAAYASADV--FVFPSRTETFGLVVLEAMASGLPVVAPDAGG----PA 302 (364)
T ss_pred -----h--HHHHh--ccCCcEEEEeccCHHHHHHHHHhCCE--EEECcccccCCcHHHHHHHcCCCEEEcCCCC----ch
Confidence 0 01111 2346888889998765 7888887 775543 478999999999999887553 45
Q ss_pred HHHHHHhcceEEeccCCCCCCCHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHH
Q 042753 390 QLLVDQLGVGIRVGEGTRNIPESDELARLLAQSVDGPRRERLKARELSGAALSAVVKGGSSDRDLNDFIKRI 461 (473)
Q Consensus 390 ~rv~~~~G~G~~l~~~~~~~~~~~~l~~~i~~~l~~~~~~~~~a~~~~~~~~~~~~~~gs~~~~~~~~~~~~ 461 (473)
..+.+. +.|...+ .-+.+++.++|.++++|+ ..+++..+-+.... ..-+.+...+++++.+
T Consensus 303 ~~i~~~-~~g~~~~-----~~~~~~l~~~i~~l~~~~-~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~ 363 (364)
T cd03814 303 DIVTDG-ENGLLVE-----PGDAEAFAAALAALLADP-ELRRRMAARARAEA----ERRSWEAFLDNLLEAY 363 (364)
T ss_pred hhhcCC-cceEEcC-----CCCHHHHHHHHHHHHcCH-HHHHHHHHHHHHHH----hhcCHHHHHHHHHHhh
Confidence 555544 7887776 446788999999999987 54443333332221 2245666666666543
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >PF03033 Glyco_transf_28: Glycosyltransferase family 28 N-terminal domain; InterPro: IPR004276 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.34 E-value=5.5e-13 Score=112.00 Aligned_cols=120 Identities=20% Similarity=0.182 Sum_probs=80.9
Q ss_pred EEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCCCChhhhhhhccCCCCCCeeEEEcCCCCCCCCCCh-hhHHHHHH--
Q 042753 8 ILVYPFPTSGHIIPLLDLTNRLLTLGLNVTVLITQNNLPLLDSLNANHPSTSLQSLVLPQPKWPAGSPA-TRLLKFMR-- 84 (473)
Q Consensus 8 Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~i~~~~~~~~~~~~~f~~l~~~~~~~~~~~-~~~~~~~~-- 84 (473)
|+|.+.|+.||++|+++||++|++|||+|++++++.+.+.+++. |++|..++.+ ..+... .....+..
T Consensus 1 Ili~~~Gt~Ghv~P~lala~~L~~rGh~V~~~~~~~~~~~v~~~-------Gl~~~~~~~~--~~~~~~~~~~~~~~~~~ 71 (139)
T PF03033_consen 1 ILIATGGTRGHVYPFLALARALRRRGHEVRLATPPDFRERVEAA-------GLEFVPIPGD--SRLPRSLEPLANLRRLA 71 (139)
T ss_dssp EEEEEESSHHHHHHHHHHHHHHHHTT-EEEEEETGGGHHHHHHT-------T-EEEESSSC--GGGGHHHHHHHHHHCHH
T ss_pred CEEEEcCChhHHHHHHHHHHHHhccCCeEEEeecccceeccccc-------CceEEEecCC--cCcCcccchhhhhhhHH
Confidence 78999999999999999999999999999999999999999766 8999988753 011110 01111111
Q ss_pred ----HHHHHhhHHHHHHHhcC----C--CCCcEEEeCCCcchHHHHHHHhCCCcEEEecchHH
Q 042753 85 ----VLRELHYPALLDWFKSH----P--SPPVAILSDFFLGWTQGLAAELGLPRVVFSPSGAF 137 (473)
Q Consensus 85 ----~~~~~~~~~l~~~l~~~----~--~~pD~VV~D~~~~~~~~~A~~~giP~v~~~~~~~~ 137 (473)
.+. .....+.+...+. . ...|+++.+.....+..+|+++|||++.....+.+
T Consensus 72 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~vaE~~~iP~~~~~~~p~~ 133 (139)
T PF03033_consen 72 RLIRGLE-EAMRILARFRPDLVVAAGGYVADDVIIAAPLAFAAALVAEQLGIPGVANRLFPWF 133 (139)
T ss_dssp HHHHHHH-HHHHHHHHHHHCCCCHCTTTTECCEECHHHHHTHHHHHHHHHTS-EEEEESSGGG
T ss_pred HHhhhhh-HHHHHhhccCcchhhhccCcccchHHHhhhhcCccceeEhhhCchHHHHhhCCcC
Confidence 111 1112222222221 1 15788888887778899999999999998776654
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC).; GO: 0016758 transferase activity, transferring hexosyl groups, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2IYF_B 2YJN_A 2P6P_A 1PNV_A 3H4T_A 3H4I_A 1PN3_B 3IA7_B 1NLM_B 1F0K_B .... |
| >COG3980 spsG Spore coat polysaccharide biosynthesis protein, predicted glycosyltransferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.27 E-value=1.1e-09 Score=97.66 Aligned_cols=296 Identities=15% Similarity=0.140 Sum_probs=183.8
Q ss_pred cEEEEEcCC----CCCChHHHHHHHHHHHhCCCeEEEEeCCCChhhhhhhccCCCCCCeeEEEcCCCCCCCCCChhhHHH
Q 042753 6 AHILVYPFP----TSGHIIPLLDLTNRLLTLGLNVTVLITQNNLPLLDSLNANHPSTSLQSLVLPQPKWPAGSPATRLLK 81 (473)
Q Consensus 6 ~~Il~~~~~----~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~i~~~~~~~~~~~~~f~~l~~~~~~~~~~~~~~~~ 81 (473)
|||+|.+-+ |.||+..++.||++|.++|..++|++.++..+.+.... .++.+....
T Consensus 1 M~V~i~~Dgg~~iGmGHV~R~l~LA~~l~k~~~~~~fl~k~~~e~~~~~~~-----~~f~~~~~~--------------- 60 (318)
T COG3980 1 MKVLIRCDGGLEIGMGHVMRTLTLARELEKRGFACLFLTKQDIEAIIHKVY-----EGFKVLEGR--------------- 60 (318)
T ss_pred CcEEEEecCCcccCcchhhhHHHHHHHHHhcCceEEEecccchhhhhhhhh-----hhccceeee---------------
Confidence 578877733 56999999999999999999999999997655443320 112211100
Q ss_pred HHHHHHHHhhHHHHHHHhcCCCCCcEEEeCCCcch---HHHHHHHhCCCcEEEecchHHHHHHHHhhhccCCCCCCCCCC
Q 042753 82 FMRVLRELHYPALLDWFKSHPSPPVAILSDFFLGW---TQGLAAELGLPRVVFSPSGAFALSVSFAMWTDLPTNDDPDNV 158 (473)
Q Consensus 82 ~~~~~~~~~~~~l~~~l~~~~~~pD~VV~D~~~~~---~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~p~~~~~~~~ 158 (473)
....+++. ++|++|.|..... .-.+..+.+.+.+.+-......+.-
T Consensus 61 ------------~~n~ik~~--k~d~lI~Dsygl~~dd~k~ik~e~~~k~l~fDd~~~~~~~d----------------- 109 (318)
T COG3980 61 ------------GNNLIKEE--KFDLLIFDSYGLNADDFKLIKEEAGSKILIFDDENAKSFKD----------------- 109 (318)
T ss_pred ------------cccccccc--cCCEEEEeccCCCHHHHHHHHHHhCCcEEEecCCCccchhh-----------------
Confidence 01157788 9999999998763 3467778899998873332211100
Q ss_pred CccccCCCCCCCCCCCccccchhhhccCCCCCchHHHHHHhhhccCCcEEeecchHHhhHHHHHHHHHhhCCCcEEEecc
Q 042753 159 DALVSFPRVPNCPVYPWYQISHLYRTLKEGDPDWDLHRSNMMANKTSWGIVFNSFAELERVYIDHMKKEMGHDRVWAVGP 238 (473)
Q Consensus 159 ~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~le~~~~~~~~~~~~~~~~~~vGp 238 (473)
. .-.......... .++. .+....++.||
T Consensus 110 -------------------~-------------d~ivN~~~~a~~-~y~~-------------------v~~k~~~~lGp 137 (318)
T COG3980 110 -------------------N-------------DLIVNAILNAND-YYGL-------------------VPNKTRYYLGP 137 (318)
T ss_pred -------------------h-------------Hhhhhhhhcchh-hccc-------------------cCcceEEEecC
Confidence 0 000000000000 0000 11023467776
Q ss_pred CCCCCCcchhhccCCCCCCCChhhhHHHhcCCCCCcEEEEEeCCcccCCHHHHHHHHHHHHhCCCcEEEEEeCCCccCCc
Q 042753 239 VLPPDDDLVESMCRGGSSSVPAHDVLTWLDSRRDESVVYVCFGSRYVLTAKQIHELAAALEKTDVDFVYCVREPDERHAS 318 (473)
Q Consensus 239 l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~V~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~ 318 (473)
=...-.+ ++ ....++. ... +..-|+|++|..- +.....+++..|.+.++.+-++++..
T Consensus 138 ~y~~lr~--eF-------~~~r~~~---~~r--~~r~ilI~lGGsD--pk~lt~kvl~~L~~~~~nl~iV~gs~------ 195 (318)
T COG3980 138 GYAPLRP--EF-------YALREEN---TER--PKRDILITLGGSD--PKNLTLKVLAELEQKNVNLHIVVGSS------ 195 (318)
T ss_pred CceeccH--HH-------HHhHHHH---hhc--chheEEEEccCCC--hhhhHHHHHHHhhccCeeEEEEecCC------
Confidence 4333201 01 1111111 111 3456999999863 45566778888888787777777754
Q ss_pred ccCCCCchhhHHhhc-CCCeEeecCcc-HHHhhhccCccceeeccCchhHHHHHhhCCeEecCcccccchhhHHHHHHHh
Q 042753 319 QDCGVLPDGFEDRVA-GRGYVIRGWSQ-QVAILRHKAVGAFLTHCGWNSVLEGVSAGVVMLTWPMDADQYTNAQLLVDQL 396 (473)
Q Consensus 319 ~~~~~lp~~~~~~~~-~~nv~v~~~~p-q~~lL~~~~v~~~ItHgG~~s~~eal~~GvP~l~~P~~~DQ~~na~rv~~~~ 396 (473)
++-+.++.++.. .+|+....... ...++..++. .|+-||. |+.|++.-|+|.+++|+...|--.|...+ ++
T Consensus 196 ---~p~l~~l~k~~~~~~~i~~~~~~~dma~LMke~d~--aI~AaGs-tlyEa~~lgvP~l~l~~a~NQ~~~a~~f~-~l 268 (318)
T COG3980 196 ---NPTLKNLRKRAEKYPNINLYIDTNDMAELMKEADL--AISAAGS-TLYEALLLGVPSLVLPLAENQIATAKEFE-AL 268 (318)
T ss_pred ---CcchhHHHHHHhhCCCeeeEecchhHHHHHHhcch--heeccch-HHHHHHHhcCCceEEeeeccHHHHHHHHH-hc
Confidence 223334444333 45666555554 4568999996 8888775 89999999999999999999999999999 55
Q ss_pred cceEEeccCCCCCCCHHHHHHHHHHHhCCcHHHHHHHHHHHH
Q 042753 397 GVGIRVGEGTRNIPESDELARLLAQSVDGPRRERLKARELSG 438 (473)
Q Consensus 397 G~G~~l~~~~~~~~~~~~l~~~i~~~l~~~~~~~~~a~~~~~ 438 (473)
|+-..+. -. +........+.++.+|. ..+.+...-++
T Consensus 269 g~~~~l~---~~-l~~~~~~~~~~~i~~d~-~~rk~l~~~~~ 305 (318)
T COG3980 269 GIIKQLG---YH-LKDLAKDYEILQIQKDY-ARRKNLSFGSK 305 (318)
T ss_pred Cchhhcc---CC-CchHHHHHHHHHhhhCH-HHhhhhhhccc
Confidence 8776665 33 77777888888898886 65555444333
|
|
| >PLN02871 UDP-sulfoquinovose:DAG sulfoquinovosyltransferase | Back alignment and domain information |
|---|
Probab=99.26 E-value=3.6e-08 Score=100.23 Aligned_cols=129 Identities=18% Similarity=0.188 Sum_probs=84.3
Q ss_pred cEEEEEeCCcccCCHHHHHHHHHHHHhC-CCcEEEEEeCCCccCCcccCCCCchhhHHhhcCCCeEeecCccHHH---hh
Q 042753 274 SVVYVCFGSRYVLTAKQIHELAAALEKT-DVDFVYCVREPDERHASQDCGVLPDGFEDRVAGRGYVIRGWSQQVA---IL 349 (473)
Q Consensus 274 ~~V~vs~Gs~~~~~~~~~~~~~~al~~~-~~~~i~~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~v~~~~pq~~---lL 349 (473)
..+++..|+... ...+..+++++++. +.+++ .++... ..+.+.+.....++...+|+++.+ ++
T Consensus 263 ~~~i~~vGrl~~--~K~~~~li~a~~~~~~~~l~-ivG~G~----------~~~~l~~~~~~~~V~f~G~v~~~ev~~~~ 329 (465)
T PLN02871 263 KPLIVYVGRLGA--EKNLDFLKRVMERLPGARLA-FVGDGP----------YREELEKMFAGTPTVFTGMLQGDELSQAY 329 (465)
T ss_pred CeEEEEeCCCch--hhhHHHHHHHHHhCCCcEEE-EEeCCh----------HHHHHHHHhccCCeEEeccCCHHHHHHHH
Confidence 445566788753 33455677777765 44444 445421 123444444456788889998654 77
Q ss_pred hccCccceeeccC----chhHHHHHhhCCeEecCcccccchhhHHHHHH--HhcceEEeccCCCCCCCHHHHHHHHHHHh
Q 042753 350 RHKAVGAFLTHCG----WNSVLEGVSAGVVMLTWPMDADQYTNAQLLVD--QLGVGIRVGEGTRNIPESDELARLLAQSV 423 (473)
Q Consensus 350 ~~~~v~~~ItHgG----~~s~~eal~~GvP~l~~P~~~DQ~~na~rv~~--~~G~G~~l~~~~~~~~~~~~l~~~i~~~l 423 (473)
..+++ +|.-.. ..++.||+++|+|+|+.... .....+.+ .-+.|..++ .-+.+++.++|.+++
T Consensus 330 ~~aDv--~V~pS~~E~~g~~vlEAmA~G~PVI~s~~g----g~~eiv~~~~~~~~G~lv~-----~~d~~~la~~i~~ll 398 (465)
T PLN02871 330 ASGDV--FVMPSESETLGFVVLEAMASGVPVVAARAG----GIPDIIPPDQEGKTGFLYT-----PGDVDDCVEKLETLL 398 (465)
T ss_pred HHCCE--EEECCcccccCcHHHHHHHcCCCEEEcCCC----CcHhhhhcCCCCCceEEeC-----CCCHHHHHHHHHHHH
Confidence 88887 664332 44789999999999987543 23334443 126788776 246899999999999
Q ss_pred CCc
Q 042753 424 DGP 426 (473)
Q Consensus 424 ~~~ 426 (473)
+|+
T Consensus 399 ~~~ 401 (465)
T PLN02871 399 ADP 401 (465)
T ss_pred hCH
Confidence 987
|
|
| >cd03823 GT1_ExpE7_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.25 E-value=2e-08 Score=97.88 Aligned_cols=137 Identities=16% Similarity=0.107 Sum_probs=83.1
Q ss_pred CCcEEEEEeCCccc-CCHHHHHHHHHHHHhCCCcEEEEEeCCCccCCcccCCCCchhhHHhhcCCCeEeecCccHHH---
Q 042753 272 DESVVYVCFGSRYV-LTAKQIHELAAALEKTDVDFVYCVREPDERHASQDCGVLPDGFEDRVAGRGYVIRGWSQQVA--- 347 (473)
Q Consensus 272 ~~~~V~vs~Gs~~~-~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~v~~~~pq~~--- 347 (473)
.++.+++..|+... ...+.+.+.+..+.+.+.++++. +... . ............++.+.+|+++.+
T Consensus 189 ~~~~~i~~~G~~~~~k~~~~li~~~~~l~~~~~~l~i~-G~~~--------~-~~~~~~~~~~~~~v~~~g~~~~~~~~~ 258 (359)
T cd03823 189 GGRLRFGFIGQLTPHKGVDLLLEAFKRLPRGDIELVIV-GNGL--------E-LEEESYELEGDPRVEFLGAYPQEEIDD 258 (359)
T ss_pred CCceEEEEEecCccccCHHHHHHHHHHHHhcCcEEEEE-cCch--------h-hhHHHHhhcCCCeEEEeCCCCHHHHHH
Confidence 45677778888753 22333333333333334555443 4331 1 001000011246788889997655
Q ss_pred hhhccCccceee-----ccCchhHHHHHhhCCeEecCcccccchhhHHHHHHHhcceEEeccCCCCCCCHHHHHHHHHHH
Q 042753 348 ILRHKAVGAFLT-----HCGWNSVLEGVSAGVVMLTWPMDADQYTNAQLLVDQLGVGIRVGEGTRNIPESDELARLLAQS 422 (473)
Q Consensus 348 lL~~~~v~~~It-----HgG~~s~~eal~~GvP~l~~P~~~DQ~~na~rv~~~~G~G~~l~~~~~~~~~~~~l~~~i~~~ 422 (473)
++..+++ +|. -|...++.||+++|+|+|+.+. ..+...+... +.|...+ .-+.+++.+++.++
T Consensus 259 ~~~~ad~--~i~ps~~~e~~~~~~~Ea~a~G~Pvi~~~~----~~~~e~i~~~-~~g~~~~-----~~d~~~l~~~i~~l 326 (359)
T cd03823 259 FYAEIDV--LVVPSIWPENFPLVIREALAAGVPVIASDI----GGMAELVRDG-VNGLLFP-----PGDAEDLAAALERL 326 (359)
T ss_pred HHHhCCE--EEEcCcccCCCChHHHHHHHCCCCEEECCC----CCHHHHhcCC-CcEEEEC-----CCCHHHHHHHHHHH
Confidence 5888887 552 2334479999999999998654 3455666633 4787777 33589999999999
Q ss_pred hCCcHHHHH
Q 042753 423 VDGPRRERL 431 (473)
Q Consensus 423 l~~~~~~~~ 431 (473)
++|+ ...+
T Consensus 327 ~~~~-~~~~ 334 (359)
T cd03823 327 IDDP-DLLE 334 (359)
T ss_pred HhCh-HHHH
Confidence 9986 4433
|
ExpE7 in Sinorhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucans (exopolysaccharide II). |
| >cd04962 GT1_like_5 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.20 E-value=4.8e-08 Score=96.19 Aligned_cols=352 Identities=13% Similarity=0.094 Sum_probs=175.6
Q ss_pred cEEEEEcCCCC-CChHHHHHHHHHHHhCCCeEEEEeCCCChhhhhhhccCCCCCCeeEEEcCCCCCCCCCChhhHHHHHH
Q 042753 6 AHILVYPFPTS-GHIIPLLDLTNRLLTLGLNVTVLITQNNLPLLDSLNANHPSTSLQSLVLPQPKWPAGSPATRLLKFMR 84 (473)
Q Consensus 6 ~~Il~~~~~~~-GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~i~~~~~~~~~~~~~f~~l~~~~~~~~~~~~~~~~~~~ 84 (473)
+||++++.|.. |.-.-...+++.|.++||+|++++.......... .+++.+..++... .+.... .
T Consensus 1 mki~~~~~p~~gG~~~~~~~la~~L~~~G~~v~v~~~~~~~~~~~~------~~~~~~~~~~~~~---~~~~~~-----~ 66 (371)
T cd04962 1 MKIGIVCYPTYGGSGVVATELGKALARRGHEVHFITSSRPFRLDEY------SPNIFFHEVEVPQ---YPLFQY-----P 66 (371)
T ss_pred CceeEEEEeCCCCccchHHHHHHHHHhcCCceEEEecCCCcchhhh------ccCeEEEEecccc---cchhhc-----c
Confidence 47877776544 7777799999999999999999987532211111 1245554333211 110000 0
Q ss_pred HHHHHhhHHHHHHHhcCCCCCcEEEeCCCcc--hHHHHHHHh----CCCcEEEecchHHHHHHHHhhhccCCCCCCCCCC
Q 042753 85 VLRELHYPALLDWFKSHPSPPVAILSDFFLG--WTQGLAAEL----GLPRVVFSPSGAFALSVSFAMWTDLPTNDDPDNV 158 (473)
Q Consensus 85 ~~~~~~~~~l~~~l~~~~~~pD~VV~D~~~~--~~~~~A~~~----giP~v~~~~~~~~~~~~~~~~~~~~p~~~~~~~~ 158 (473)
.........+.++++.. +||+|.+..... ....++.++ ++|+|.........
T Consensus 67 ~~~~~~~~~l~~~i~~~--~~divh~~~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~-------------------- 124 (371)
T cd04962 67 PYDLALASKIAEVAKRY--KLDLLHVHYAVPHAVAAYLAREILGKKDLPVVTTLHGTDIT-------------------- 124 (371)
T ss_pred hhHHHHHHHHHHHHhcC--CccEEeecccCCccHHHHHHHHhcCcCCCcEEEEEcCCccc--------------------
Confidence 01112345677778888 999998764332 223334332 78987643221000
Q ss_pred CccccCCCCCCCCCCCccccchhhhccCCCCCchHHHHHHhhhccCCcEEeecchHHhhHHHHHHHHHhhCCCcEEEecc
Q 042753 159 DALVSFPRVPNCPVYPWYQISHLYRTLKEGDPDWDLHRSNMMANKTSWGIVFNSFAELERVYIDHMKKEMGHDRVWAVGP 238 (473)
Q Consensus 159 ~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~le~~~~~~~~~~~~~~~~~~vGp 238 (473)
..+. ....... ........+.++..|-...+ ...... ... .++..+..
T Consensus 125 -----~~~~--------------------~~~~~~~---~~~~~~~~d~ii~~s~~~~~-~~~~~~--~~~-~~i~vi~n 172 (371)
T cd04962 125 -----LVGQ--------------------DPSFQPA---TRFSIEKSDGVTAVSESLRQ-ETYELF--DIT-KEIEVIPN 172 (371)
T ss_pred -----cccc--------------------cccchHH---HHHHHhhCCEEEEcCHHHHH-HHHHhc--CCc-CCEEEecC
Confidence 0000 0000001 11123445555555532211 111111 012 34555554
Q ss_pred CCCCCCcchhhccCCCCCCCChhhhHHHhcCCCCCcEEEEEeCCccc-CCHHHHHHHHHHHHh-CCCcEEEEEeCCCccC
Q 042753 239 VLPPDDDLVESMCRGGSSSVPAHDVLTWLDSRRDESVVYVCFGSRYV-LTAKQIHELAAALEK-TDVDFVYCVREPDERH 316 (473)
Q Consensus 239 l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~V~vs~Gs~~~-~~~~~~~~~~~al~~-~~~~~i~~~~~~~~~~ 316 (473)
..... . .. ....+...+.+.. .....+++..|.... ...+.+-+.+..+.+ .+.++++.-....
T Consensus 173 ~~~~~-~-----~~----~~~~~~~~~~~~~-~~~~~~il~~g~l~~~K~~~~li~a~~~l~~~~~~~l~i~G~g~~--- 238 (371)
T cd04962 173 FVDED-R-----FR----PKPDEALKRRLGA-PEGEKVLIHISNFRPVKRIDDVIRIFAKVRKEVPARLLLVGDGPE--- 238 (371)
T ss_pred CcCHh-h-----cC----CCchHHHHHhcCC-CCCCeEEEEecccccccCHHHHHHHHHHHHhcCCceEEEEcCCcC---
Confidence 33322 1 00 1111222222222 234566777787753 222333333333332 3455544433221
Q ss_pred CcccCCCCchhhHHhhc-CCCeEeecCccH-HHhhhccCccceee----ccCchhHHHHHhhCCeEecCcccccchhhHH
Q 042753 317 ASQDCGVLPDGFEDRVA-GRGYVIRGWSQQ-VAILRHKAVGAFLT----HCGWNSVLEGVSAGVVMLTWPMDADQYTNAQ 390 (473)
Q Consensus 317 ~~~~~~~lp~~~~~~~~-~~nv~v~~~~pq-~~lL~~~~v~~~It----HgG~~s~~eal~~GvP~l~~P~~~DQ~~na~ 390 (473)
.+.+-+ ..++.. ..++...++.++ .+++..+++ +|. -|...++.||+++|+|+|+... ...+.
T Consensus 239 ----~~~~~~-~~~~~~~~~~v~~~g~~~~~~~~~~~~d~--~v~ps~~E~~~~~~~EAma~g~PvI~s~~----~~~~e 307 (371)
T cd04962 239 ----RSPAER-LARELGLQDDVLFLGKQDHVEELLSIADL--FLLPSEKESFGLAALEAMACGVPVVASNA----GGIPE 307 (371)
T ss_pred ----HHHHHH-HHHHcCCCceEEEecCcccHHHHHHhcCE--EEeCCCcCCCccHHHHHHHcCCCEEEeCC----CCchh
Confidence 011111 111111 346777787765 457888887 552 2345699999999999998643 34555
Q ss_pred HHHHHhcceEEeccCCCCCCCHHHHHHHHHHHhCCc---HHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHh
Q 042753 391 LLVDQLGVGIRVGEGTRNIPESDELARLLAQSVDGP---RRERLKARELSGAALSAVVKGGSSDRDLNDFIKRINE 463 (473)
Q Consensus 391 rv~~~~G~G~~l~~~~~~~~~~~~l~~~i~~~l~~~---~~~~~~a~~~~~~~~~~~~~~gs~~~~~~~~~~~~~~ 463 (473)
.+.+. ..|...+ .-+.+++.++|.++++++ .++++++++. + ...-+.+..++++++.+++
T Consensus 308 ~i~~~-~~G~~~~-----~~~~~~l~~~i~~l~~~~~~~~~~~~~~~~~---~----~~~fs~~~~~~~~~~~y~~ 370 (371)
T cd04962 308 VVKHG-ETGFLVD-----VGDVEAMAEYALSLLEDDELWQEFSRAARNR---A----AERFDSERIVPQYEALYRR 370 (371)
T ss_pred hhcCC-CceEEcC-----CCCHHHHHHHHHHHHhCHHHHHHHHHHHHHH---H----HHhCCHHHHHHHHHHHHHh
Confidence 56533 4676665 347899999999999886 2233333332 1 2234466666777766543
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >cd03817 GT1_UGDG_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.19 E-value=3e-08 Score=97.08 Aligned_cols=131 Identities=18% Similarity=0.217 Sum_probs=81.4
Q ss_pred CCcEEEEEeCCccc-CCHHHHHHHHHHHHh--CCCcEEEEEeCCCccCCcccCCCCchhhHHh---h-cCCCeEeecCcc
Q 042753 272 DESVVYVCFGSRYV-LTAKQIHELAAALEK--TDVDFVYCVREPDERHASQDCGVLPDGFEDR---V-AGRGYVIRGWSQ 344 (473)
Q Consensus 272 ~~~~V~vs~Gs~~~-~~~~~~~~~~~al~~--~~~~~i~~~~~~~~~~~~~~~~~lp~~~~~~---~-~~~nv~v~~~~p 344 (473)
+++.+++..|+... ...+.+-.++..+.+ .+.++++.-.... .+.+.+. . ..+++...+++|
T Consensus 200 ~~~~~i~~~G~~~~~k~~~~l~~~~~~~~~~~~~~~l~i~G~~~~-----------~~~~~~~~~~~~~~~~v~~~g~~~ 268 (374)
T cd03817 200 EDEPVLLYVGRLAKEKNIDFLIRAFARLLKEEPDVKLVIVGDGPE-----------REELEELARELGLADRVIFTGFVP 268 (374)
T ss_pred CCCeEEEEEeeeecccCHHHHHHHHHHHHHhCCCeEEEEEeCCch-----------HHHHHHHHHHcCCCCcEEEeccCC
Confidence 45567777888753 233444444444443 3344444433221 1122221 1 246788889998
Q ss_pred HHH---hhhccCccceeec----cCchhHHHHHhhCCeEecCcccccchhhHHHHHHHhcceEEeccCCCCCCCHHHHHH
Q 042753 345 QVA---ILRHKAVGAFLTH----CGWNSVLEGVSAGVVMLTWPMDADQYTNAQLLVDQLGVGIRVGEGTRNIPESDELAR 417 (473)
Q Consensus 345 q~~---lL~~~~v~~~ItH----gG~~s~~eal~~GvP~l~~P~~~DQ~~na~rv~~~~G~G~~l~~~~~~~~~~~~l~~ 417 (473)
+.+ ++..+++ +|.- |...++.||+++|+|+|+... ...+..+.+. +.|..++ ... . ++.+
T Consensus 269 ~~~~~~~~~~ad~--~l~~s~~e~~~~~~~Ea~~~g~PvI~~~~----~~~~~~i~~~-~~g~~~~---~~~--~-~~~~ 335 (374)
T cd03817 269 REELPDYYKAADL--FVFASTTETQGLVLLEAMAAGLPVVAVDA----PGLPDLVADG-ENGFLFP---PGD--E-ALAE 335 (374)
T ss_pred hHHHHHHHHHcCE--EEecccccCcChHHHHHHHcCCcEEEeCC----CChhhheecC-ceeEEeC---CCC--H-HHHH
Confidence 755 6788887 5533 335789999999999998653 4455666633 6787777 322 2 8999
Q ss_pred HHHHHhCCc
Q 042753 418 LLAQSVDGP 426 (473)
Q Consensus 418 ~i~~~l~~~ 426 (473)
++.++++++
T Consensus 336 ~i~~l~~~~ 344 (374)
T cd03817 336 ALLRLLQDP 344 (374)
T ss_pred HHHHHHhCh
Confidence 999999987
|
UDP-glucose-diacylglycerol glucosyltransferase (UGDG; also known as 1,2-diacylglycerol 3-glucosyltransferase) catalyzes the transfer of glucose from UDP-glucose to 1,2-diacylglycerol forming 3-D-glucosyl-1,2-diacylglycerol. |
| >cd03794 GT1_wbuB_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.18 E-value=3.7e-08 Score=96.85 Aligned_cols=340 Identities=18% Similarity=0.156 Sum_probs=168.6
Q ss_pred EEEEEcCC----CCCChHHHHHHHHHHHhCCCeEEEEeCCCChhhhhhhc--cCCCCCCeeEEEcCCCCCCCCCChhhHH
Q 042753 7 HILVYPFP----TSGHIIPLLDLTNRLLTLGLNVTVLITQNNLPLLDSLN--ANHPSTSLQSLVLPQPKWPAGSPATRLL 80 (473)
Q Consensus 7 ~Il~~~~~----~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~i~~~~--~~~~~~~~~f~~l~~~~~~~~~~~~~~~ 80 (473)
||++++.. ..|+......+++.|.++||+|++++............ ......++.+..++..... ....+.
T Consensus 1 kIl~i~~~~~~~~~G~~~~~~~l~~~L~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~ 77 (394)
T cd03794 1 KILILSQYFPPELGGGAFRTTELAEELVKRGHEVTVITGSPNYPSGKIYKGYKREEVDGVRVHRVPLPPYK---KNGLLK 77 (394)
T ss_pred CEEEEecccCCccCCcceeHHHHHHHHHhCCceEEEEecCCCcccccccccceEEecCCeEEEEEecCCCC---ccchHH
Confidence 56666532 25999999999999999999999999764432221100 0000125555555432111 111111
Q ss_pred HHHHHHHHHhhHHHHHHH-hcCCCCCcEEEeCCCcc----hHHHHHHHhCCCcEEEecchHHHHHHHHhhhccCCCCCCC
Q 042753 81 KFMRVLRELHYPALLDWF-KSHPSPPVAILSDFFLG----WTQGLAAELGLPRVVFSPSGAFALSVSFAMWTDLPTNDDP 155 (473)
Q Consensus 81 ~~~~~~~~~~~~~l~~~l-~~~~~~pD~VV~D~~~~----~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~p~~~~~ 155 (473)
....... ........+. +.. +||+|++..... .+..++...++|++............ .
T Consensus 78 ~~~~~~~-~~~~~~~~~~~~~~--~~D~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~-~------------ 141 (394)
T cd03794 78 RLLNYLS-FALSALLALLKRRR--RPDVIIATSPPLLIALAALLLARLKGAPFVLEVRDLWPESAV-A------------ 141 (394)
T ss_pred HHHhhhH-HHHHHHHHHHhccc--CCCEEEEcCChHHHHHHHHHHHHhcCCCEEEEehhhcchhHH-H------------
Confidence 1111111 1122222222 456 899999996222 23455666699988754332110000 0
Q ss_pred CCCCccccCCCCCCCCCCCccccchhhhccCCCCCchHHHHHHhh-hccCCcEEeecchHHhhHHHHHHHH-HhhCCCcE
Q 042753 156 DNVDALVSFPRVPNCPVYPWYQISHLYRTLKEGDPDWDLHRSNMM-ANKTSWGIVFNSFAELERVYIDHMK-KEMGHDRV 233 (473)
Q Consensus 156 ~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~s~~~le~~~~~~~~-~~~~~~~~ 233 (473)
. +. ... .....+.+..... .....+.++..+-...+ .+. ...+..++
T Consensus 142 --------~-~~-----~~~------------~~~~~~~~~~~~~~~~~~~d~vi~~s~~~~~-----~~~~~~~~~~~~ 190 (394)
T cd03794 142 --------L-GL-----LKN------------GSLLYRLLRKLERLIYRRADAIVVISPGMRE-----YLVRRGVPPEKI 190 (394)
T ss_pred --------c-cC-----ccc------------cchHHHHHHHHHHHHHhcCCEEEEECHHHHH-----HHHhcCCCcCce
Confidence 0 00 000 0000112222222 23445666655533222 111 11111355
Q ss_pred EEeccCCCCCCcchhhccCCCCCCCChhhhHHHhcCCCCCcEEEEEeCCccc-CCHHHHHHHHHHHHhC-CCcEEEEEeC
Q 042753 234 WAVGPVLPPDDDLVESMCRGGSSSVPAHDVLTWLDSRRDESVVYVCFGSRYV-LTAKQIHELAAALEKT-DVDFVYCVRE 311 (473)
Q Consensus 234 ~~vGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~V~vs~Gs~~~-~~~~~~~~~~~al~~~-~~~~i~~~~~ 311 (473)
..+...+... . ... .........+.. ..++.+++..|+... ...+.+...+..+.+. +.++++ ++.
T Consensus 191 ~~i~~~~~~~-~----~~~----~~~~~~~~~~~~--~~~~~~i~~~G~~~~~k~~~~l~~~~~~l~~~~~~~l~i-~G~ 258 (394)
T cd03794 191 SVIPNGVDLE-L----FKP----PPADESLRKELG--LDDKFVVLYAGNIGRAQGLDTLLEAAALLKDRPDIRFLI-VGD 258 (394)
T ss_pred EEcCCCCCHH-H----cCC----ccchhhhhhccC--CCCcEEEEEecCcccccCHHHHHHHHHHHhhcCCeEEEE-eCC
Confidence 5555433332 1 000 000011111111 345677888888754 2334444444444443 444433 343
Q ss_pred CCccCCcccCCCCchhhHH---hhcCCCeEeecCccHHH---hhhccCccceeeccC---------chhHHHHHhhCCeE
Q 042753 312 PDERHASQDCGVLPDGFED---RVAGRGYVIRGWSQQVA---ILRHKAVGAFLTHCG---------WNSVLEGVSAGVVM 376 (473)
Q Consensus 312 ~~~~~~~~~~~~lp~~~~~---~~~~~nv~v~~~~pq~~---lL~~~~v~~~ItHgG---------~~s~~eal~~GvP~ 376 (473)
.. ..+.+.+ ....+|+.+..++++.+ ++..+++ +|.... -+++.||+++|+|+
T Consensus 259 ~~----------~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~di--~i~~~~~~~~~~~~~p~~~~Ea~~~G~pv 326 (394)
T cd03794 259 GP----------EKEELKELAKALGLDNVTFLGRVPKEELPELLAAADV--GLVPLKPGPAFEGVSPSKLFEYMAAGKPV 326 (394)
T ss_pred cc----------cHHHHHHHHHHcCCCcEEEeCCCChHHHHHHHHhhCe--eEEeccCcccccccCchHHHHHHHCCCcE
Confidence 21 1122222 22346888889998655 6788887 553322 23479999999999
Q ss_pred ecCcccccchhhHHHHHHHhcceEEeccCCCCCCCHHHHHHHHHHHhCCcHHHHH
Q 042753 377 LTWPMDADQYTNAQLLVDQLGVGIRVGEGTRNIPESDELARLLAQSVDGPRRERL 431 (473)
Q Consensus 377 l~~P~~~DQ~~na~rv~~~~G~G~~l~~~~~~~~~~~~l~~~i~~~l~~~~~~~~ 431 (473)
|+.+..+.+.. +... +.|...+ .-+.+++.++|.++++|+ ..++
T Consensus 327 i~~~~~~~~~~----~~~~-~~g~~~~-----~~~~~~l~~~i~~~~~~~-~~~~ 370 (394)
T cd03794 327 LASVDGESAEL----VEEA-GAGLVVP-----PGDPEALAAAILELLDDP-EERA 370 (394)
T ss_pred EEecCCCchhh----hccC-CcceEeC-----CCCHHHHHHHHHHHHhCh-HHHH
Confidence 99877654433 3322 5677776 237899999999999886 4443
|
wbuB in E. coli is involved in the biosynthesis of the O26 O-antigen. It has been proposed to function as an N-acetyl-L-fucosamine (L-FucNAc) transferase. |
| >cd03800 GT1_Sucrose_synthase This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.18 E-value=1e-07 Score=94.70 Aligned_cols=81 Identities=19% Similarity=0.227 Sum_probs=61.3
Q ss_pred CCCeEeecCccHHH---hhhccCccceeec----cCchhHHHHHhhCCeEecCcccccchhhHHHHHHHhcceEEeccCC
Q 042753 334 GRGYVIRGWSQQVA---ILRHKAVGAFLTH----CGWNSVLEGVSAGVVMLTWPMDADQYTNAQLLVDQLGVGIRVGEGT 406 (473)
Q Consensus 334 ~~nv~v~~~~pq~~---lL~~~~v~~~ItH----gG~~s~~eal~~GvP~l~~P~~~DQ~~na~rv~~~~G~G~~l~~~~ 406 (473)
..|+.+.+|+|+.+ ++..+++ ++.. |-..++.||+++|+|+|+.... .....+.+. +.|...+
T Consensus 282 ~~~v~~~g~~~~~~~~~~~~~adi--~l~ps~~e~~~~~l~Ea~a~G~Pvi~s~~~----~~~e~i~~~-~~g~~~~--- 351 (398)
T cd03800 282 IDRVDFPGRVSREDLPALYRAADV--FVNPALYEPFGLTALEAMACGLPVVATAVG----GPRDIVVDG-VTGLLVD--- 351 (398)
T ss_pred CceEEEeccCCHHHHHHHHHhCCE--EEecccccccCcHHHHHHhcCCCEEECCCC----CHHHHccCC-CCeEEeC---
Confidence 36788899999866 5788887 6643 3346899999999999987543 345556533 6888876
Q ss_pred CCCCCHHHHHHHHHHHhCCc
Q 042753 407 RNIPESDELARLLAQSVDGP 426 (473)
Q Consensus 407 ~~~~~~~~l~~~i~~~l~~~ 426 (473)
.-+.+++.++|.++++++
T Consensus 352 --~~~~~~l~~~i~~l~~~~ 369 (398)
T cd03800 352 --PRDPEALAAALRRLLTDP 369 (398)
T ss_pred --CCCHHHHHHHHHHHHhCH
Confidence 336999999999999886
|
The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light. |
| >cd03801 GT1_YqgM_like This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known | Back alignment and domain information |
|---|
Probab=99.17 E-value=1.3e-07 Score=92.07 Aligned_cols=338 Identities=17% Similarity=0.125 Sum_probs=176.3
Q ss_pred CCChHHHHHHHHHHHhCCCeEEEEeCCCChhhhhhhccCCCCCCeeEEEcCCCCCCCCCChhhHHHHHHHHHHHhhHHHH
Q 042753 16 SGHIIPLLDLTNRLLTLGLNVTVLITQNNLPLLDSLNANHPSTSLQSLVLPQPKWPAGSPATRLLKFMRVLRELHYPALL 95 (473)
Q Consensus 16 ~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~i~~~~~~~~~~~~~f~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 95 (473)
.|+...+..+++.|.+.||+|++++............. ....... . ............ .....+.
T Consensus 14 ~G~~~~~~~l~~~L~~~g~~v~i~~~~~~~~~~~~~~~-----~~~~~~~--------~-~~~~~~~~~~~~-~~~~~~~ 78 (374)
T cd03801 14 GGAERHVLELARALAARGHEVTVLTPGDGGLPDEEEVG-----GIVVVRP--------P-PLLRVRRLLLLL-LLALRLR 78 (374)
T ss_pred CcHhHHHHHHHHHHHhcCceEEEEecCCCCCCceeeec-----CcceecC--------C-cccccchhHHHH-HHHHHHH
Confidence 68999999999999999999999998754332111100 0000000 0 000000111111 2334567
Q ss_pred HHHhcCCCCCcEEEeCCCcchHH--HHHHHhCCCcEEEecchHHHHHHHHhhhccCCCCCCCCCCCccccCCCCCCCCCC
Q 042753 96 DWFKSHPSPPVAILSDFFLGWTQ--GLAAELGLPRVVFSPSGAFALSVSFAMWTDLPTNDDPDNVDALVSFPRVPNCPVY 173 (473)
Q Consensus 96 ~~l~~~~~~pD~VV~D~~~~~~~--~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~p~l~~~~~~ 173 (473)
.+++.. ++|+|++........ ..+...++|++........... . .
T Consensus 79 ~~~~~~--~~Dii~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~----------------------------~---~ 125 (374)
T cd03801 79 RLLRRE--RFDVVHAHDWLALLAAALAARLLGIPLVLTVHGLEFGRP----------------------------G---N 125 (374)
T ss_pred HHhhhc--CCcEEEEechhHHHHHHHHHHhcCCcEEEEeccchhhcc----------------------------c---c
Confidence 778888 999999988766433 5788889998876443221000 0 0
Q ss_pred CccccchhhhccCCCCCchHHH-HHHhhhccCCcEEeecchHHhhHHHHHHHHHhhCC--CcEEEeccCCCCCCcchhhc
Q 042753 174 PWYQISHLYRTLKEGDPDWDLH-RSNMMANKTSWGIVFNSFAELERVYIDHMKKEMGH--DRVWAVGPVLPPDDDLVESM 250 (473)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~s~~~le~~~~~~~~~~~~~--~~~~~vGpl~~~~~~~~~~~ 250 (473)
. ........ ..........+.++..+-...+ .+....+. .++..+.+-.... . .
T Consensus 126 ~-------------~~~~~~~~~~~~~~~~~~~d~~i~~s~~~~~-----~~~~~~~~~~~~~~~i~~~~~~~-~----~ 182 (374)
T cd03801 126 E-------------LGLLLKLARALERRALRRADRIIAVSEATRE-----ELRELGGVPPEKITVIPNGVDTE-R----F 182 (374)
T ss_pred c-------------hhHHHHHHHHHHHHHHHhCCEEEEecHHHHH-----HHHhcCCCCCCcEEEecCccccc-c----c
Confidence 0 00011111 1122333445555555532222 22222220 1455555433332 1 0
Q ss_pred cCCCCCCCChhhhHHHhcCCCCCcEEEEEeCCcccCCHHHHHHHHHHHHh---C--CCcEEEEEeCCCccCCcccCCCCc
Q 042753 251 CRGGSSSVPAHDVLTWLDSRRDESVVYVCFGSRYVLTAKQIHELAAALEK---T--DVDFVYCVREPDERHASQDCGVLP 325 (473)
Q Consensus 251 ~~~~~~~~~~~~~~~~l~~~~~~~~V~vs~Gs~~~~~~~~~~~~~~al~~---~--~~~~i~~~~~~~~~~~~~~~~~lp 325 (473)
............. ..++.+++.+|+... ...+..+++++.. . +.+++ .++... ..
T Consensus 183 ------~~~~~~~~~~~~~-~~~~~~i~~~g~~~~--~k~~~~~i~~~~~~~~~~~~~~l~-i~G~~~----------~~ 242 (374)
T cd03801 183 ------RPAPRAARRRLGI-PEDEPVILFVGRLVP--RKGVDLLLEALAKLRKEYPDVRLV-IVGDGP----------LR 242 (374)
T ss_pred ------CccchHHHhhcCC-cCCCeEEEEecchhh--hcCHHHHHHHHHHHhhhcCCeEEE-EEeCcH----------HH
Confidence 0000111111111 245567778888752 2223344444443 2 23333 333321 11
Q ss_pred hhhHH----hhcCCCeEeecCccHHH---hhhccCccceee----ccCchhHHHHHhhCCeEecCcccccchhhHHHHHH
Q 042753 326 DGFED----RVAGRGYVIRGWSQQVA---ILRHKAVGAFLT----HCGWNSVLEGVSAGVVMLTWPMDADQYTNAQLLVD 394 (473)
Q Consensus 326 ~~~~~----~~~~~nv~v~~~~pq~~---lL~~~~v~~~It----HgG~~s~~eal~~GvP~l~~P~~~DQ~~na~rv~~ 394 (473)
..+.+ .....++.+.+++++.+ ++..+++ +|. -|..+++.||+++|+|+|+.+. ......+.+
T Consensus 243 ~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~di--~i~~~~~~~~~~~~~Ea~~~g~pvI~~~~----~~~~~~~~~ 316 (374)
T cd03801 243 EELEALAAELGLGDRVTFLGFVPDEDLPALYAAADV--FVLPSLYEGFGLVLLEAMAAGLPVVASDV----GGIPEVVED 316 (374)
T ss_pred HHHHHHHHHhCCCcceEEEeccChhhHHHHHHhcCE--EEecchhccccchHHHHHHcCCcEEEeCC----CChhHHhcC
Confidence 22221 12356788889997544 6788887 553 3557799999999999998765 445555653
Q ss_pred HhcceEEeccCCCCCCCHHHHHHHHHHHhCCcHHHHHH-HHHHHHHHHHHHhcCCChHHHHHHHHHHH
Q 042753 395 QLGVGIRVGEGTRNIPESDELARLLAQSVDGPRRERLK-ARELSGAALSAVVKGGSSDRDLNDFIKRI 461 (473)
Q Consensus 395 ~~G~G~~l~~~~~~~~~~~~l~~~i~~~l~~~~~~~~~-a~~~~~~~~~~~~~~gs~~~~~~~~~~~~ 461 (473)
. +.|...+ ..+.+++.++|.++++++ ...+. .+...+.+ ...-+.+...+++++.+
T Consensus 317 ~-~~g~~~~-----~~~~~~l~~~i~~~~~~~-~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~ 373 (374)
T cd03801 317 G-ETGLLVP-----PGDPEALAEAILRLLDDP-ELRRRLGEAARERV----AERFSWDRVAARTEEVY 373 (374)
T ss_pred C-cceEEeC-----CCCHHHHHHHHHHHHcCh-HHHHHHHHHHHHHH----HHhcCHHHHHHHHHHhh
Confidence 3 6787776 345899999999999987 44333 22222233 23345566666666543
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. |
| >cd03798 GT1_wlbH_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.15 E-value=2.8e-07 Score=89.95 Aligned_cols=346 Identities=18% Similarity=0.124 Sum_probs=175.8
Q ss_pred CCCChHHHHHHHHHHHhCCCeEEEEeCCCChhhhhhhccCCCCCCeeEEEcCCCCCCCCCChhhHHHHHHHHHHHhhHHH
Q 042753 15 TSGHIIPLLDLTNRLLTLGLNVTVLITQNNLPLLDSLNANHPSTSLQSLVLPQPKWPAGSPATRLLKFMRVLRELHYPAL 94 (473)
Q Consensus 15 ~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~i~~~~~~~~~~~~~f~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 94 (473)
..|+..-...+++.|.+.||+|++++............. .......... .... ............ .....+
T Consensus 13 ~~g~~~~~~~~~~~l~~~g~~v~v~~~~~~~~~~~~~~~-----~~~~~~~~~~--~~~~-~~~~~~~~~~~~-~~~~~~ 83 (377)
T cd03798 13 NGGGGIFVKELARALAKRGVEVTVLAPGPWGPKLLDLLK-----GRLVGVERLP--VLLP-VVPLLKGPLLYL-LAARAL 83 (377)
T ss_pred CchHHHHHHHHHHHHHHCCCceEEEecCCCCCCchhhcc-----cccccccccc--cCcc-hhhccccchhHH-HHHHHH
Confidence 478899999999999999999999998754332221100 0000000000 0000 000000011111 333456
Q ss_pred HHHHh--cCCCCCcEEEeCCCcc---hHHHHHHHhCCCcEEEecchHHHHHHHHhhhccCCCCCCCCCCCccccCCCCCC
Q 042753 95 LDWFK--SHPSPPVAILSDFFLG---WTQGLAAELGLPRVVFSPSGAFALSVSFAMWTDLPTNDDPDNVDALVSFPRVPN 169 (473)
Q Consensus 95 ~~~l~--~~~~~pD~VV~D~~~~---~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~p~l~~ 169 (473)
.++++ .. ++|+|++..... ....+++..++|++......... ....
T Consensus 84 ~~~l~~~~~--~~dii~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~---------------------------~~~~ 134 (377)
T cd03798 84 LKLLKLKRF--RPDLIHAHFAYPDGFAAALLKRKLGIPLVVTLHGSDVN---------------------------LLPR 134 (377)
T ss_pred HHHHhcccC--CCCEEEEeccchHHHHHHHHHHhcCCCEEEEeecchhc---------------------------ccCc
Confidence 66776 77 999999886544 23466677788988754332210 0000
Q ss_pred CCCCCccccchhhhccCCCCCchHHHHHHhhhccCCcEEeecchHHhhHHHHHHHHHh-hCCCcEEEeccCCCCCCcchh
Q 042753 170 CPVYPWYQISHLYRTLKEGDPDWDLHRSNMMANKTSWGIVFNSFAELERVYIDHMKKE-MGHDRVWAVGPVLPPDDDLVE 248 (473)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~le~~~~~~~~~~-~~~~~~~~vGpl~~~~~~~~~ 248 (473)
.. . ............+.++..+-...+ .+... .+..++..++...... .
T Consensus 135 ------------------~~-~--~~~~~~~~~~~~d~ii~~s~~~~~-----~~~~~~~~~~~~~~i~~~~~~~-~--- 184 (377)
T cd03798 135 ------------------KR-L--LRALLRRALRRADAVIAVSEALAD-----ELKALGIDPEKVTVIPNGVDTE-R--- 184 (377)
T ss_pred ------------------hh-h--HHHHHHHHHhcCCeEEeCCHHHHH-----HHHHhcCCCCceEEcCCCcCcc-c---
Confidence 00 0 011111233445555555532222 11221 1114666666544443 1
Q ss_pred hccCCCCCCCChhhhHHHhcCCCCCcEEEEEeCCccc-CCHHHHHHHHHHHHhCCCcEEEEEeCCCccCCcccCCCCchh
Q 042753 249 SMCRGGSSSVPAHDVLTWLDSRRDESVVYVCFGSRYV-LTAKQIHELAAALEKTDVDFVYCVREPDERHASQDCGVLPDG 327 (473)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~l~~~~~~~~V~vs~Gs~~~-~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~lp~~ 327 (473)
.. ....... ..... ..++.+++..|+... ...+.+-..+..+.+....+.+.+.+.. . ..+.
T Consensus 185 -~~-----~~~~~~~-~~~~~-~~~~~~i~~~g~~~~~k~~~~li~~~~~~~~~~~~~~l~i~g~~--------~-~~~~ 247 (377)
T cd03798 185 -FS-----PADRAEA-RKLGL-PEDKKVILFVGRLVPRKGIDYLIEALARLLKKRPDVHLVIVGDG--------P-LREA 247 (377)
T ss_pred -CC-----CcchHHH-HhccC-CCCceEEEEeccCccccCHHHHHHHHHHHHhcCCCeEEEEEcCC--------c-chHH
Confidence 00 0011111 11112 245677788888754 2233333344444333233444443321 0 1112
Q ss_pred hHHh---h-cCCCeEeecCccHH---HhhhccCcccee----eccCchhHHHHHhhCCeEecCcccccchhhHHHHHHHh
Q 042753 328 FEDR---V-AGRGYVIRGWSQQV---AILRHKAVGAFL----THCGWNSVLEGVSAGVVMLTWPMDADQYTNAQLLVDQL 396 (473)
Q Consensus 328 ~~~~---~-~~~nv~v~~~~pq~---~lL~~~~v~~~I----tHgG~~s~~eal~~GvP~l~~P~~~DQ~~na~rv~~~~ 396 (473)
+.+. . ..+|+.+.+++++. .++..+++ +| +-|..+++.||+++|+|+|+-+.. .....+.+.
T Consensus 248 ~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad~--~i~~~~~~~~~~~~~Ea~~~G~pvI~~~~~----~~~~~~~~~- 320 (377)
T cd03798 248 LEALAAELGLEDRVTFLGAVPHEEVPAYYAAADV--FVLPSLREGFGLVLLEAMACGLPVVATDVG----GIPEIITDG- 320 (377)
T ss_pred HHHHHHhcCCcceEEEeCCCCHHHHHHHHHhcCe--eecchhhccCChHHHHHHhcCCCEEEecCC----ChHHHhcCC-
Confidence 2222 1 24678888999875 46777887 44 235567899999999999986543 344555533
Q ss_pred cceEEeccCCCCCCCHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHh
Q 042753 397 GVGIRVGEGTRNIPESDELARLLAQSVDGPRRERLKARELSGAALSAVVKGGSSDRDLNDFIKRINE 463 (473)
Q Consensus 397 G~G~~l~~~~~~~~~~~~l~~~i~~~l~~~~~~~~~a~~~~~~~~~~~~~~gs~~~~~~~~~~~~~~ 463 (473)
+.|...+ .-+.+++.++|.+++++. .. +..++-...+. ..-+.+..++++.+.+.+
T Consensus 321 ~~g~~~~-----~~~~~~l~~~i~~~~~~~-~~-~~~~~~~~~~~----~~~s~~~~~~~~~~~~~~ 376 (377)
T cd03798 321 ENGLLVP-----PGDPEALAEAILRLLADP-WL-RLGRAARRRVA----ERFSWENVAERLLELYRE 376 (377)
T ss_pred cceeEEC-----CCCHHHHHHHHHHHhcCc-HH-HHhHHHHHHHH----HHhhHHHHHHHHHHHHhh
Confidence 5677666 457999999999999987 53 22222222221 223345566666666543
|
wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS. |
| >cd03808 GT1_cap1E_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.14 E-value=1.6e-07 Score=91.20 Aligned_cols=314 Identities=14% Similarity=0.118 Sum_probs=163.6
Q ss_pred EEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCCCChhh-hhhhccCCCCCCeeEEEcCCCCCCCCCChhhHHHHHHH
Q 042753 7 HILVYPFPTSGHIIPLLDLTNRLLTLGLNVTVLITQNNLPL-LDSLNANHPSTSLQSLVLPQPKWPAGSPATRLLKFMRV 85 (473)
Q Consensus 7 ~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~-i~~~~~~~~~~~~~f~~l~~~~~~~~~~~~~~~~~~~~ 85 (473)
||++++....|+...+..++++|.++||+|++++....... ... .++.+..++.... ... .+..+
T Consensus 1 kIl~i~~~~~g~~~~~~~l~~~L~~~g~~v~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~-~~~---~~~~~--- 66 (359)
T cd03808 1 KILHIVTVDGGLYSFRLPLIKALRAAGYEVHVVAPPGDELEELEA-------LGVKVIPIPLDRR-GIN---PFKDL--- 66 (359)
T ss_pred CeeEEEecchhHHHHHHHHHHHHHhcCCeeEEEecCCCccccccc-------CCceEEecccccc-ccC---hHhHH---
Confidence 57877766789999999999999999999999998765432 121 2566666653211 011 11111
Q ss_pred HHHHhhHHHHHHHhcCCCCCcEEEeCCCcc--hHHHHHHHhCCCcEEEecchHHHHHHHHhhhccCCCCCCCCCCCcccc
Q 042753 86 LRELHYPALLDWFKSHPSPPVAILSDFFLG--WTQGLAAELGLPRVVFSPSGAFALSVSFAMWTDLPTNDDPDNVDALVS 163 (473)
Q Consensus 86 ~~~~~~~~l~~~l~~~~~~pD~VV~D~~~~--~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~ 163 (473)
.....+.++++.. +||+|++..... .+...++..+.|.+...........
T Consensus 67 ---~~~~~~~~~~~~~--~~dvv~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~----------------------- 118 (359)
T cd03808 67 ---KALLRLYRLLRKE--RPDIVHTHTPKPGILGRLAARLAGVPKVIYTVHGLGFVF----------------------- 118 (359)
T ss_pred ---HHHHHHHHHHHhc--CCCEEEEccccchhHHHHHHHHcCCCCEEEEecCcchhh-----------------------
Confidence 1123456677778 999999886544 2334445356665554333211000
Q ss_pred CCCCCCCCCCCccccchhhhccCCCCCchHHHHHHhh-hccCCcEEeecchHHhhHHHHHHHHHhhC---CCcEEEeccC
Q 042753 164 FPRVPNCPVYPWYQISHLYRTLKEGDPDWDLHRSNMM-ANKTSWGIVFNSFAELERVYIDHMKKEMG---HDRVWAVGPV 239 (473)
Q Consensus 164 ~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~s~~~le~~~~~~~~~~~~---~~~~~~vGpl 239 (473)
... ......+..... .....+.++..+-...+ .+..... ...+..++..
T Consensus 119 ---~~~-------------------~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~-----~~~~~~~~~~~~~~~~~~~~ 171 (359)
T cd03808 119 ---TSG-------------------GLKRRLYLLLERLALRFTDKVIFQNEDDRD-----LALKLGIIKKKKTVLIPGSG 171 (359)
T ss_pred ---ccc-------------------hhHHHHHHHHHHHHHhhccEEEEcCHHHHH-----HHHHhcCCCcCceEEecCCC
Confidence 000 000111111111 22234555555532222 1111110 0123333322
Q ss_pred CCCCCcchhhccCCCCCCCChhhhHHHhcCCCCCcEEEEEeCCccc-CCHHHHHHHHHHHHh--CCCcEEEEEeCCCccC
Q 042753 240 LPPDDDLVESMCRGGSSSVPAHDVLTWLDSRRDESVVYVCFGSRYV-LTAKQIHELAAALEK--TDVDFVYCVREPDERH 316 (473)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~V~vs~Gs~~~-~~~~~~~~~~~al~~--~~~~~i~~~~~~~~~~ 316 (473)
.... . . ...... ...++.+++..|+... ...+.+-+.+..+.+ .+.++++.-....
T Consensus 172 ~~~~-~----~------~~~~~~-------~~~~~~~i~~~G~~~~~k~~~~li~~~~~l~~~~~~~~l~i~G~~~~--- 230 (359)
T cd03808 172 VDLD-R----F------SPSPEP-------IPEDDPVFLFVARLLKDKGIDELLEAARILKAKGPNVRLLLVGDGDE--- 230 (359)
T ss_pred CChh-h----c------Cccccc-------cCCCCcEEEEEeccccccCHHHHHHHHHHHHhcCCCeEEEEEcCCCc---
Confidence 2221 1 0 000000 1245678888888753 233444444444443 2344444333321
Q ss_pred CcccCCCCchh-hHHhhcCCCeEeecCccH-HHhhhccCccceeecc----CchhHHHHHhhCCeEecCcccccchhhHH
Q 042753 317 ASQDCGVLPDG-FEDRVAGRGYVIRGWSQQ-VAILRHKAVGAFLTHC----GWNSVLEGVSAGVVMLTWPMDADQYTNAQ 390 (473)
Q Consensus 317 ~~~~~~~lp~~-~~~~~~~~nv~v~~~~pq-~~lL~~~~v~~~ItHg----G~~s~~eal~~GvP~l~~P~~~DQ~~na~ 390 (473)
. +..... ..+.....++...++..+ ..++..+++ +|.-+ -.+++.||+++|+|+|+.+.. ....
T Consensus 231 --~--~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~adi--~i~ps~~e~~~~~~~Ea~~~G~Pvi~s~~~----~~~~ 300 (359)
T cd03808 231 --E--NPAAILEIEKLGLEGRVEFLGFRDDVPELLAAADV--FVLPSYREGLPRVLLEAMAMGRPVIATDVP----GCRE 300 (359)
T ss_pred --c--hhhHHHHHHhcCCcceEEEeeccccHHHHHHhccE--EEecCcccCcchHHHHHHHcCCCEEEecCC----Cchh
Confidence 0 100000 111112456777676543 458888887 66443 267899999999999986543 3444
Q ss_pred HHHHHhcceEEeccCCCCCCCHHHHHHHHHHHhCCc
Q 042753 391 LLVDQLGVGIRVGEGTRNIPESDELARLLAQSVDGP 426 (473)
Q Consensus 391 rv~~~~G~G~~l~~~~~~~~~~~~l~~~i~~~l~~~ 426 (473)
.+.+. +.|...+ .-+.+++.++|.+++.|+
T Consensus 301 ~i~~~-~~g~~~~-----~~~~~~~~~~i~~l~~~~ 330 (359)
T cd03808 301 AVIDG-VNGFLVP-----PGDAEALADAIERLIEDP 330 (359)
T ss_pred hhhcC-cceEEEC-----CCCHHHHHHHHHHHHhCH
Confidence 55533 6787776 346899999999999887
|
cap1E in Streptococcus pneumoniae is required for the synthesis of type 1 capsular polysaccharides. |
| >PRK05749 3-deoxy-D-manno-octulosonic-acid transferase; Reviewed | Back alignment and domain information |
|---|
Probab=99.12 E-value=9.8e-08 Score=95.95 Aligned_cols=104 Identities=21% Similarity=0.258 Sum_probs=68.5
Q ss_pred HHhhhccCccceee----ccCchhHHHHHhhCCeEecCcccccchhhHHHHHHHhcceEEeccCCCCCCCHHHHHHHHHH
Q 042753 346 VAILRHKAVGAFLT----HCGWNSVLEGVSAGVVMLTWPMDADQYTNAQLLVDQLGVGIRVGEGTRNIPESDELARLLAQ 421 (473)
Q Consensus 346 ~~lL~~~~v~~~It----HgG~~s~~eal~~GvP~l~~P~~~DQ~~na~rv~~~~G~G~~l~~~~~~~~~~~~l~~~i~~ 421 (473)
..+++.+++ +|+. -||..+++||+++|+|+|+.|...++......+.+. |+++... +.++|.++|.+
T Consensus 314 ~~~y~~aDi-~~v~~S~~e~~g~~~lEAma~G~PVI~g~~~~~~~e~~~~~~~~-g~~~~~~-------d~~~La~~l~~ 384 (425)
T PRK05749 314 GLLYAIADI-AFVGGSLVKRGGHNPLEPAAFGVPVISGPHTFNFKEIFERLLQA-GAAIQVE-------DAEDLAKAVTY 384 (425)
T ss_pred HHHHHhCCE-EEECCCcCCCCCCCHHHHHHhCCCEEECCCccCHHHHHHHHHHC-CCeEEEC-------CHHHHHHHHHH
Confidence 457788887 3442 244556999999999999999988888888877645 7776654 58999999999
Q ss_pred HhCCcHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHH
Q 042753 422 SVDGPRRERLKARELSGAALSAVVKGGSSDRDLNDFIKRI 461 (473)
Q Consensus 422 ~l~~~~~~~~~a~~~~~~~~~~~~~~gs~~~~~~~~~~~~ 461 (473)
+++|+ ..+++..+-+....+ +..|..++.++.+.+.+
T Consensus 385 ll~~~-~~~~~m~~~a~~~~~--~~~~~~~~~~~~l~~~l 421 (425)
T PRK05749 385 LLTDP-DARQAYGEAGVAFLK--QNQGALQRTLQLLEPYL 421 (425)
T ss_pred HhcCH-HHHHHHHHHHHHHHH--hCccHHHHHHHHHHHhc
Confidence 99987 444333222222211 12344455555554443
|
|
| >TIGR00236 wecB UDP-N-acetylglucosamine 2-epimerase | Back alignment and domain information |
|---|
Probab=99.11 E-value=9.3e-09 Score=101.15 Aligned_cols=347 Identities=14% Similarity=0.119 Sum_probs=175.6
Q ss_pred EEEEEcCCCCCChHHHHHHHHHHHhC-CCeEEEEeCCCChhhhhhhccCCCCCCeeE-EEcCCCCCCCCCChhhHHHHHH
Q 042753 7 HILVYPFPTSGHIIPLLDLTNRLLTL-GLNVTVLITQNNLPLLDSLNANHPSTSLQS-LVLPQPKWPAGSPATRLLKFMR 84 (473)
Q Consensus 7 ~Il~~~~~~~GH~~p~l~La~~L~~r-Gh~Vt~~~~~~~~~~i~~~~~~~~~~~~~f-~~l~~~~~~~~~~~~~~~~~~~ 84 (473)
||+++ .+++.|+.=+.++.++|.++ +.++.++.+......+..... . .++.. +.+.. .. . ... ...
T Consensus 2 ~i~~~-~gtr~~~~~~~p~~~~l~~~~~~~~~~~~tg~h~~~~~~~~~-~--~~i~~~~~~~~---~~-~-~~~---~~~ 69 (365)
T TIGR00236 2 KVSIV-LGTRPEAIKMAPLIRALKKYPEIDSYVIVTAQHREMLDQVLD-L--FHLPPDYDLNI---MS-P-GQT---LGE 69 (365)
T ss_pred eEEEE-EecCHHHHHHHHHHHHHhhCCCCCEEEEEeCCCHHHHHHHHH-h--cCCCCCeeeec---CC-C-CCC---HHH
Confidence 66654 45888999999999999987 566666666544333333211 0 11211 11111 01 1 111 112
Q ss_pred HHHHHhhHHHHHHHhcCCCCCcEEEeCC--Cc-chHHHHHHHhCCCcEEEecchHHHHHHHHhhhccCCCCCCCCCCCcc
Q 042753 85 VLRELHYPALLDWFKSHPSPPVAILSDF--FL-GWTQGLAAELGLPRVVFSPSGAFALSVSFAMWTDLPTNDDPDNVDAL 161 (473)
Q Consensus 85 ~~~~~~~~~l~~~l~~~~~~pD~VV~D~--~~-~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 161 (473)
.+. .....+.+++++. +||+|++-. .. ..+..+|..+|||++.+.... . +.+
T Consensus 70 ~~~-~~~~~l~~~l~~~--~pDiv~~~gd~~~~la~a~aa~~~~ipv~h~~~g~-~-------------------s~~-- 124 (365)
T TIGR00236 70 ITS-NMLEGLEELLLEE--KPDIVLVQGDTTTTLAGALAAFYLQIPVGHVEAGL-R-------------------TGD-- 124 (365)
T ss_pred HHH-HHHHHHHHHHHHc--CCCEEEEeCCchHHHHHHHHHHHhCCCEEEEeCCC-C-------------------cCC--
Confidence 222 3336778889999 999999853 32 256788999999987642110 0 000
Q ss_pred ccCCCCCCCCCCCccccchhhhccCCCCCchHHHHHHhhhccCCcEEeecchHHhhHHHHHHHHHhhCCCcEEEeccCC-
Q 042753 162 VSFPRVPNCPVYPWYQISHLYRTLKEGDPDWDLHRSNMMANKTSWGIVFNSFAELERVYIDHMKKEMGHDRVWAVGPVL- 240 (473)
Q Consensus 162 ~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~le~~~~~~~~~~~~~~~~~~vGpl~- 240 (473)
. ...++ .. ..+ +..... ++.++..|- ....... ..-.+..+++.+|-..
T Consensus 125 ~-~~~~~-----------~~---------~~r---~~~~~~--ad~~~~~s~-~~~~~l~---~~G~~~~~I~vign~~~ 174 (365)
T TIGR00236 125 R-YSPMP-----------EE---------INR---QLTGHI--ADLHFAPTE-QAKDNLL---RENVKADSIFVTGNTVI 174 (365)
T ss_pred C-CCCCc-----------cH---------HHH---HHHHHH--HHhccCCCH-HHHHHHH---HcCCCcccEEEeCChHH
Confidence 0 00000 00 000 000000 111222221 1111111 1112203678888432
Q ss_pred CCCCcchhhccCCCCCCCChhhhHHHhcCCCCCcEEEEEeCCcccCCHHHHHHHHHHHHhC-----CCcEEEEEeCCCcc
Q 042753 241 PPDDDLVESMCRGGSSSVPAHDVLTWLDSRRDESVVYVCFGSRYVLTAKQIHELAAALEKT-----DVDFVYCVREPDER 315 (473)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~V~vs~Gs~~~~~~~~~~~~~~al~~~-----~~~~i~~~~~~~~~ 315 (473)
... . .... ......+.+.+.. ++++|+++.+-.... .+.+..+++++.+. +.++++....+.
T Consensus 175 d~~-~----~~~~---~~~~~~~~~~~~~--~~~~vl~~~hr~~~~-~k~~~~ll~a~~~l~~~~~~~~~vi~~~~~~-- 241 (365)
T TIGR00236 175 DAL-L----TNVE---IAYSSPVLSEFGE--DKRYILLTLHRRENV-GEPLENIFKAIREIVEEFEDVQIVYPVHLNP-- 241 (365)
T ss_pred HHH-H----HHHh---hccchhHHHhcCC--CCCEEEEecCchhhh-hhHHHHHHHHHHHHHHHCCCCEEEEECCCCh--
Confidence 221 0 0000 0011222222322 345676665433222 13466677776542 455555544321
Q ss_pred CCcccCCCCchhhHHhhc-CCCeEeecCccH---HHhhhccCccceeeccCchhHHHHHhhCCeEecCcccccchhhHHH
Q 042753 316 HASQDCGVLPDGFEDRVA-GRGYVIRGWSQQ---VAILRHKAVGAFLTHCGWNSVLEGVSAGVVMLTWPMDADQYTNAQL 391 (473)
Q Consensus 316 ~~~~~~~~lp~~~~~~~~-~~nv~v~~~~pq---~~lL~~~~v~~~ItHgG~~s~~eal~~GvP~l~~P~~~DQ~~na~r 391 (473)
.+-..+.+... .+++.+.+.+++ ..++..+++ +|+.+|.. +.||+++|+|+|.++..++++. .
T Consensus 242 -------~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~ad~--vv~~Sg~~-~~EA~a~g~PvI~~~~~~~~~e---~ 308 (365)
T TIGR00236 242 -------VVREPLHKHLGDSKRVHLIEPLEYLDFLNLAANSHL--ILTDSGGV-QEEAPSLGKPVLVLRDTTERPE---T 308 (365)
T ss_pred -------HHHHHHHHHhCCCCCEEEECCCChHHHHHHHHhCCE--EEECChhH-HHHHHHcCCCEEECCCCCCChH---H
Confidence 11112222222 357777776665 456777886 89887654 7999999999999876555553 2
Q ss_pred HHHHhcceEEeccCCCCCCCHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHH
Q 042753 392 LVDQLGVGIRVGEGTRNIPESDELARLLAQSVDGPRRERLKARELSGAALSAVVKGGSSDRDLNDFIK 459 (473)
Q Consensus 392 v~~~~G~G~~l~~~~~~~~~~~~l~~~i~~~l~~~~~~~~~a~~~~~~~~~~~~~~gs~~~~~~~~~~ 459 (473)
+. . |.|..+. .+.++|.+++.++++++ ..+++...-...+ .+|+++++.++.+.+
T Consensus 309 ~~-~-g~~~lv~------~d~~~i~~ai~~ll~~~-~~~~~~~~~~~~~----g~~~a~~ri~~~l~~ 363 (365)
T TIGR00236 309 VE-A-GTNKLVG------TDKENITKAAKRLLTDP-DEYKKMSNASNPY----GDGEASERIVEELLN 363 (365)
T ss_pred Hh-c-CceEEeC------CCHHHHHHHHHHHHhCh-HHHHHhhhcCCCC----cCchHHHHHHHHHHh
Confidence 22 4 7776554 36899999999999986 6665544333222 345555655555544
|
Epimerase activity was also demonstrated in a bifunctional rat enzyme, for which the N-terminal domain appears to be orthologous. The set of proteins found above the suggested cutoff includes E. coli WecB in one of two deeply branched clusters and the rat UDP-N-acetylglucosamine 2-epimerase domain in the other. |
| >cd03820 GT1_amsD_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.09 E-value=1.7e-07 Score=90.49 Aligned_cols=311 Identities=15% Similarity=0.129 Sum_probs=159.5
Q ss_pred EEEEEc-CC--CCCChHHHHHHHHHHHhCCCeEEEEeCCCChhhhhhhccCCCCCCeeEEEcCCCCCCCCCChhhHHHHH
Q 042753 7 HILVYP-FP--TSGHIIPLLDLTNRLLTLGLNVTVLITQNNLPLLDSLNANHPSTSLQSLVLPQPKWPAGSPATRLLKFM 83 (473)
Q Consensus 7 ~Il~~~-~~--~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~i~~~~~~~~~~~~~f~~l~~~~~~~~~~~~~~~~~~ 83 (473)
||+++. .. ..|...-+..++++|.++||+|++++........... ..++.+..++.... . ..
T Consensus 1 kI~i~~~~~~~~gG~~~~~~~l~~~L~~~g~~v~v~~~~~~~~~~~~~-----~~~~~~~~~~~~~~------~----~~ 65 (348)
T cd03820 1 KILFVIPSLGNAGGAERVLSNLANALAEKGHEVTIISLDKGEPPFYEL-----DPKIKVIDLGDKRD------S----KL 65 (348)
T ss_pred CeEEEeccccCCCChHHHHHHHHHHHHhCCCeEEEEecCCCCCCcccc-----CCccceeecccccc------c----ch
Confidence 455444 22 3466666888999999999999999987553110010 12344443332110 0 00
Q ss_pred HHHHHHhhHHHHHHHhcCCCCCcEEEeCCCcchHHHHHHHhCC-CcEEEecchHHHHHHHHhhhccCCCCCCCCCCCccc
Q 042753 84 RVLRELHYPALLDWFKSHPSPPVAILSDFFLGWTQGLAAELGL-PRVVFSPSGAFALSVSFAMWTDLPTNDDPDNVDALV 162 (473)
Q Consensus 84 ~~~~~~~~~~l~~~l~~~~~~pD~VV~D~~~~~~~~~A~~~gi-P~v~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 162 (473)
.... .....+.++++.. +||+|++..........+...+. |++.........
T Consensus 66 ~~~~-~~~~~~~~~l~~~--~~d~i~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~------------------------ 118 (348)
T cd03820 66 LARF-KKLRRLRKLLKNN--KPDVVISFLTSLLTFLASLGLKIVKLIVSEHNSPDA------------------------ 118 (348)
T ss_pred hccc-cchHHHHHhhccc--CCCEEEEcCchHHHHHHHHhhccccEEEecCCCccc------------------------
Confidence 0001 2234566777778 99999998765333344444554 665532211100
Q ss_pred cCCCCCCCCCCCccccchhhhccCCCCCchHHHHHHhhhccCCcEEeecchHHhhHHHHHHHHHhhCCCcEEEeccCCCC
Q 042753 163 SFPRVPNCPVYPWYQISHLYRTLKEGDPDWDLHRSNMMANKTSWGIVFNSFAELERVYIDHMKKEMGHDRVWAVGPVLPP 242 (473)
Q Consensus 163 ~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~le~~~~~~~~~~~~~~~~~~vGpl~~~ 242 (473)
... ...............+.++..+-... .......+ .++..+++-...
T Consensus 119 ----~~~---------------------~~~~~~~~~~~~~~~d~ii~~s~~~~-----~~~~~~~~-~~~~vi~~~~~~ 167 (348)
T cd03820 119 ----YKK---------------------RLRRLLLRRLLYRRADAVVVLTEEDR-----ALYYKKFN-KNVVVIPNPLPF 167 (348)
T ss_pred ----hhh---------------------hhHHHHHHHHHHhcCCEEEEeCHHHH-----HHhhccCC-CCeEEecCCcCh
Confidence 000 00000012223444555555553322 11111122 456666644433
Q ss_pred CCcchhhccCCCCCCCChhhhHHHhcCCCCCcEEEEEeCCccc-CCHHHHHHHHHHHHhC--CCcEEEEEeCCCccCCcc
Q 042753 243 DDDLVESMCRGGSSSVPAHDVLTWLDSRRDESVVYVCFGSRYV-LTAKQIHELAAALEKT--DVDFVYCVREPDERHASQ 319 (473)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~V~vs~Gs~~~-~~~~~~~~~~~al~~~--~~~~i~~~~~~~~~~~~~ 319 (473)
. . ... . . ..++.+++..|+... ...+.+.+++..+.+. +.++++ ++...
T Consensus 168 ~-~-----------~~~-~------~--~~~~~~i~~~g~~~~~K~~~~l~~~~~~l~~~~~~~~l~i-~G~~~------ 219 (348)
T cd03820 168 P-P-----------EEP-S------S--DLKSKRILAVGRLVPQKGFDLLIEAWAKIAKKHPDWKLRI-VGDGP------ 219 (348)
T ss_pred h-h-----------ccc-c------C--CCCCcEEEEEEeeccccCHHHHHHHHHHHHhcCCCeEEEE-EeCCC------
Confidence 3 1 000 0 1 234456667777643 2334444445544432 334433 33321
Q ss_pred cCCCCchhhH---Hhhc-CCCeEeecCcc-HHHhhhccCccceeecc----CchhHHHHHhhCCeEecCcccccchhhHH
Q 042753 320 DCGVLPDGFE---DRVA-GRGYVIRGWSQ-QVAILRHKAVGAFLTHC----GWNSVLEGVSAGVVMLTWPMDADQYTNAQ 390 (473)
Q Consensus 320 ~~~~lp~~~~---~~~~-~~nv~v~~~~p-q~~lL~~~~v~~~ItHg----G~~s~~eal~~GvP~l~~P~~~DQ~~na~ 390 (473)
....+. ++.. ..++...++.. -..++..+++ +|.-+ ..+++.||+++|+|+|+.+....+..
T Consensus 220 ----~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~ad~--~i~ps~~e~~~~~~~Ea~a~G~Pvi~~~~~~~~~~--- 290 (348)
T cd03820 220 ----EREALEALIKELGLEDRVILLGFTKNIEEYYAKASI--FVLTSRFEGFPMVLLEAMAFGLPVISFDCPTGPSE--- 290 (348)
T ss_pred ----CHHHHHHHHHHcCCCCeEEEcCCcchHHHHHHhCCE--EEeCccccccCHHHHHHHHcCCCEEEecCCCchHh---
Confidence 111121 1111 34566666633 3458888887 56543 25789999999999998765444332
Q ss_pred HHHHHhc-ceEEeccCCCCCCCHHHHHHHHHHHhCCcHHHHHHHHH
Q 042753 391 LLVDQLG-VGIRVGEGTRNIPESDELARLLAQSVDGPRRERLKARE 435 (473)
Q Consensus 391 rv~~~~G-~G~~l~~~~~~~~~~~~l~~~i~~~l~~~~~~~~~a~~ 435 (473)
+... | .|...+ ..+.+++.++|.++++|+ +.+++..+
T Consensus 291 -~~~~-~~~g~~~~-----~~~~~~~~~~i~~ll~~~-~~~~~~~~ 328 (348)
T cd03820 291 -IIED-GVNGLLVP-----NGDVEALAEALLRLMEDE-ELRKRMGA 328 (348)
T ss_pred -hhcc-CcceEEeC-----CCCHHHHHHHHHHHHcCH-HHHHHHHH
Confidence 3324 4 787776 346899999999999997 55444433
|
AmSD in Erwinia amylovora has been shown to be involved in the biosynthesis of amylovoran, the acidic exopolysaccharide acting as a virulence factor. This enzyme may be responsible for the formation of galactose alpha-1,6 linkages in amylovoran. |
| >cd03816 GT1_ALG1_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.09 E-value=3.8e-07 Score=91.21 Aligned_cols=123 Identities=15% Similarity=0.066 Sum_probs=70.9
Q ss_pred CCccEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCCCChhhhhhhccCCCCCCeeEEEcCCCCCCCCCChhh-HHH
Q 042753 3 PAGAHILVYPFPTSGHIIPLLDLTNRLLTLGLNVTVLITQNNLPLLDSLNANHPSTSLQSLVLPQPKWPAGSPATR-LLK 81 (473)
Q Consensus 3 ~~~~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~i~~~~~~~~~~~~~f~~l~~~~~~~~~~~~~-~~~ 81 (473)
|..+||.+++..-.|+-..+..+|+.|+++||+|++++.......-+... ..++.+..++.... ....... +..
T Consensus 1 ~~~~~~~~~~~~~~~~~~R~~~~a~~L~~~G~~V~ii~~~~~~~~~~~~~----~~~v~~~~~~~~~~-~~~~~~~~~~~ 75 (415)
T cd03816 1 PKRKRVCVLVLGDIGRSPRMQYHALSLAKHGWKVDLVGYLETPPHDEILS----NPNITIHPLPPPPQ-RLNKLPFLLFA 75 (415)
T ss_pred CCccEEEEEEecccCCCHHHHHHHHHHHhcCceEEEEEecCCCCCHHHhc----CCCEEEEECCCCcc-ccccchHHHHH
Confidence 44678888888778888889999999999999999999763221111010 13677777653210 0000011 111
Q ss_pred HHHHHHHHhhHHHHHHHhcCCCCCcEEEeCCCcc-----hHHHHHHHhCCCcEEEec
Q 042753 82 FMRVLRELHYPALLDWFKSHPSPPVAILSDFFLG-----WTQGLAAELGLPRVVFSP 133 (473)
Q Consensus 82 ~~~~~~~~~~~~l~~~l~~~~~~pD~VV~D~~~~-----~~~~~A~~~giP~v~~~~ 133 (473)
+..... .....+..++... +||+|++..... .+..++...++|+|..+.
T Consensus 76 ~~~~~~-~~~~~~~~l~~~~--~~Dvi~~~~~~~~~~~~~a~~~~~~~~~~~V~~~h 129 (415)
T cd03816 76 PLKVLW-QFFSLLWLLYKLR--PADYILIQNPPSIPTLLIAWLYCLLRRTKLIIDWH 129 (415)
T ss_pred HHHHHH-HHHHHHHHHHhcC--CCCEEEEeCCCCchHHHHHHHHHHHhCCeEEEEcC
Confidence 111111 2223334456666 899999854221 233456667999887533
|
The yeast gene ALG1 has been shown to function as a mannosyltransferase that catalyzes the formation of dolichol pyrophosphate (Dol-PP)-GlcNAc2Man from GDP-Man and Dol-PP-Glc-NAc2, and participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. In humans ALG1 has been associated with the congenital disorders of glycosylation (CDG) designated as subtype CDG-Ik. |
| >PRK10307 putative glycosyl transferase; Provisional | Back alignment and domain information |
|---|
Probab=99.06 E-value=1.1e-06 Score=88.02 Aligned_cols=166 Identities=16% Similarity=0.119 Sum_probs=95.9
Q ss_pred CCcEEEEEeCCcccCCHHHHHHHHHHHHhC----CCcEEEEEeCCCccCCcccCCCCchhhHHh---hcCCCeEeecCcc
Q 042753 272 DESVVYVCFGSRYVLTAKQIHELAAALEKT----DVDFVYCVREPDERHASQDCGVLPDGFEDR---VAGRGYVIRGWSQ 344 (473)
Q Consensus 272 ~~~~V~vs~Gs~~~~~~~~~~~~~~al~~~----~~~~i~~~~~~~~~~~~~~~~~lp~~~~~~---~~~~nv~v~~~~p 344 (473)
+++.+++..|+... ..-+..++++++.. +.+++ .++... ..+.+++. ...+|+.+.+|+|
T Consensus 227 ~~~~~i~~~G~l~~--~kg~~~li~a~~~l~~~~~~~l~-ivG~g~----------~~~~l~~~~~~~~l~~v~f~G~~~ 293 (412)
T PRK10307 227 DGKKIVLYSGNIGE--KQGLELVIDAARRLRDRPDLIFV-ICGQGG----------GKARLEKMAQCRGLPNVHFLPLQP 293 (412)
T ss_pred CCCEEEEEcCcccc--ccCHHHHHHHHHHhccCCCeEEE-EECCCh----------hHHHHHHHHHHcCCCceEEeCCCC
Confidence 34566667788753 23344455555432 23333 444421 12333322 2234788889998
Q ss_pred HHH---hhhccCccceeeccCc------hhHHHHHhhCCeEecCcccccchhhHHHHHHHhcceEEeccCCCCCCCHHHH
Q 042753 345 QVA---ILRHKAVGAFLTHCGW------NSVLEGVSAGVVMLTWPMDADQYTNAQLLVDQLGVGIRVGEGTRNIPESDEL 415 (473)
Q Consensus 345 q~~---lL~~~~v~~~ItHgG~------~s~~eal~~GvP~l~~P~~~DQ~~na~rv~~~~G~G~~l~~~~~~~~~~~~l 415 (473)
+.+ +++.+++..+.+..+. +.+.|++++|+|+|+....+. .....+. +.|+.++ .-+.+++
T Consensus 294 ~~~~~~~~~~aDi~v~ps~~e~~~~~~p~kl~eama~G~PVi~s~~~g~--~~~~~i~---~~G~~~~-----~~d~~~l 363 (412)
T PRK10307 294 YDRLPALLKMADCHLLPQKAGAADLVLPSKLTNMLASGRNVVATAEPGT--ELGQLVE---GIGVCVE-----PESVEAL 363 (412)
T ss_pred HHHHHHHHHhcCEeEEeeccCcccccCcHHHHHHHHcCCCEEEEeCCCc--hHHHHHh---CCcEEeC-----CCCHHHH
Confidence 754 6888887434344332 236899999999999864331 1122232 6787776 3468999
Q ss_pred HHHHHHHhCCcHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHhh
Q 042753 416 ARLLAQSVDGPRRERLKARELSGAALSAVVKGGSSDRDLNDFIKRINEL 464 (473)
Q Consensus 416 ~~~i~~~l~~~~~~~~~a~~~~~~~~~~~~~~gs~~~~~~~~~~~~~~~ 464 (473)
.++|.++++|+ ..+++ +++..++.+.+.-+.+..++++++.+++.
T Consensus 364 a~~i~~l~~~~-~~~~~---~~~~a~~~~~~~fs~~~~~~~~~~~~~~~ 408 (412)
T PRK10307 364 VAAIAALARQA-LLRPK---LGTVAREYAERTLDKENVLRQFIADIRGL 408 (412)
T ss_pred HHHHHHHHhCH-HHHHH---HHHHHHHHHHHHcCHHHHHHHHHHHHHHH
Confidence 99999999886 33322 22222222233355677788888777764
|
|
| >cd03825 GT1_wcfI_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.05 E-value=3.8e-07 Score=89.36 Aligned_cols=113 Identities=16% Similarity=0.125 Sum_probs=73.9
Q ss_pred CCeEeecCcc-HH---HhhhccCccceeec----cCchhHHHHHhhCCeEecCcccccchhhHHHHHHHhcceEEeccCC
Q 042753 335 RGYVIRGWSQ-QV---AILRHKAVGAFLTH----CGWNSVLEGVSAGVVMLTWPMDADQYTNAQLLVDQLGVGIRVGEGT 406 (473)
Q Consensus 335 ~nv~v~~~~p-q~---~lL~~~~v~~~ItH----gG~~s~~eal~~GvP~l~~P~~~DQ~~na~rv~~~~G~G~~l~~~~ 406 (473)
.++...+|++ +. .+++.+++ +|.- |..+++.||+++|+|+|+... ......+.+. +.|..++
T Consensus 244 ~~v~~~g~~~~~~~~~~~~~~ad~--~l~ps~~e~~g~~~~Eam~~g~PvI~~~~----~~~~e~~~~~-~~g~~~~--- 313 (365)
T cd03825 244 FPVHYLGSLNDDESLALIYSAADV--FVVPSLQENFPNTAIEALACGTPVVAFDV----GGIPDIVDHG-VTGYLAK--- 313 (365)
T ss_pred CceEecCCcCCHHHHHHHHHhCCE--EEeccccccccHHHHHHHhcCCCEEEecC----CCChhheeCC-CceEEeC---
Confidence 5677789998 43 46888887 6664 346899999999999998643 2333344422 4676665
Q ss_pred CCCCCHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHh
Q 042753 407 RNIPESDELARLLAQSVDGPRRERLKARELSGAALSAVVKGGSSDRDLNDFIKRINE 463 (473)
Q Consensus 407 ~~~~~~~~l~~~i~~~l~~~~~~~~~a~~~~~~~~~~~~~~gs~~~~~~~~~~~~~~ 463 (473)
..+.+++.+++.++++++ ...++ +++..++.....-|.+..++++++..++
T Consensus 314 --~~~~~~~~~~l~~l~~~~-~~~~~---~~~~~~~~~~~~~s~~~~~~~~~~~y~~ 364 (365)
T cd03825 314 --PGDPEDLAEGIEWLLADP-DEREE---LGEAARELAENEFDSRVQAKRYLSLYEE 364 (365)
T ss_pred --CCCHHHHHHHHHHHHhCH-HHHHH---HHHHHHHHHHHhcCHHHHHHHHHHHHhh
Confidence 357899999999999886 43322 2222222223345667777777776653
|
wcfI in Bacteroides fragilis has been shown to be involved in the capsular polysaccharide biosynthesis. |
| >cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.04 E-value=1.2e-06 Score=87.23 Aligned_cols=81 Identities=19% Similarity=0.189 Sum_probs=59.1
Q ss_pred CCCeEeecCccHHH---hhhccCccceee---ccC-chhHHHHHhhCCeEecCcccccchhhHHHHHHHhcceEEeccCC
Q 042753 334 GRGYVIRGWSQQVA---ILRHKAVGAFLT---HCG-WNSVLEGVSAGVVMLTWPMDADQYTNAQLLVDQLGVGIRVGEGT 406 (473)
Q Consensus 334 ~~nv~v~~~~pq~~---lL~~~~v~~~It---HgG-~~s~~eal~~GvP~l~~P~~~DQ~~na~rv~~~~G~G~~l~~~~ 406 (473)
.++|.+.+++|+.+ +|..+++ +|. +.| ..++.||+++|+|+|+.. .......+.+. ..|..++
T Consensus 280 ~~~V~f~G~v~~~~~~~~l~~adv--~v~~s~~e~~~~~llEAmA~G~PVIas~----~~g~~e~i~~~-~~G~lv~--- 349 (396)
T cd03818 280 LSRVHFLGRVPYDQYLALLQVSDV--HVYLTYPFVLSWSLLEAMACGCLVVGSD----TAPVREVITDG-ENGLLVD--- 349 (396)
T ss_pred cceEEEeCCCCHHHHHHHHHhCcE--EEEcCcccccchHHHHHHHCCCCEEEcC----CCCchhhcccC-CceEEcC---
Confidence 46788889999765 5677887 543 223 348999999999999864 34455555522 4677665
Q ss_pred CCCCCHHHHHHHHHHHhCCc
Q 042753 407 RNIPESDELARLLAQSVDGP 426 (473)
Q Consensus 407 ~~~~~~~~l~~~i~~~l~~~ 426 (473)
.-+.+++.++|.++++|+
T Consensus 350 --~~d~~~la~~i~~ll~~~ 367 (396)
T cd03818 350 --FFDPDALAAAVIELLDDP 367 (396)
T ss_pred --CCCHHHHHHHHHHHHhCH
Confidence 346999999999999986
|
ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II). |
| >cd03786 GT1_UDP-GlcNAc_2-Epimerase Bacterial members of the UDP-N-Acetylglucosamine (GlcNAc) 2-Epimerase family are known to catalyze the reversible interconversion of UDP-GlcNAc and UDP-N-acetylmannosamine (UDP-ManNAc) | Back alignment and domain information |
|---|
Probab=99.04 E-value=4.5e-09 Score=103.35 Aligned_cols=137 Identities=13% Similarity=0.125 Sum_probs=87.9
Q ss_pred CCcEEEEEeCCcccC-CHHHHHHHHHHHHhCCC-cEEEEEeCCCccCCcccCCCCchhhHHh---hc--CCCeEeecCcc
Q 042753 272 DESVVYVCFGSRYVL-TAKQIHELAAALEKTDV-DFVYCVREPDERHASQDCGVLPDGFEDR---VA--GRGYVIRGWSQ 344 (473)
Q Consensus 272 ~~~~V~vs~Gs~~~~-~~~~~~~~~~al~~~~~-~~i~~~~~~~~~~~~~~~~~lp~~~~~~---~~--~~nv~v~~~~p 344 (473)
+++.|++++|..... ..+.+..+++++++... ++.++...+. ..-+.+.+. .. ..++.+.+..+
T Consensus 197 ~~~~vlv~~~r~~~~~~~k~~~~l~~al~~l~~~~~~vi~~~~~---------~~~~~l~~~~~~~~~~~~~v~~~~~~~ 267 (363)
T cd03786 197 PKKYILVTLHRVENVDDGEQLEEILEALAELAEEDVPVVFPNHP---------RTRPRIREAGLEFLGHHPNVLLISPLG 267 (363)
T ss_pred CCCEEEEEeCCccccCChHHHHHHHHHHHHHHhcCCEEEEECCC---------ChHHHHHHHHHhhccCCCCEEEECCcC
Confidence 567888888887543 45667778888876532 3444444331 111222221 11 35777766655
Q ss_pred HH---HhhhccCccceeeccCchhHHHHHhhCCeEecCcccccchhhHHHHHHHhcceEEeccCCCCCCCHHHHHHHHHH
Q 042753 345 QV---AILRHKAVGAFLTHCGWNSVLEGVSAGVVMLTWPMDADQYTNAQLLVDQLGVGIRVGEGTRNIPESDELARLLAQ 421 (473)
Q Consensus 345 q~---~lL~~~~v~~~ItHgG~~s~~eal~~GvP~l~~P~~~DQ~~na~rv~~~~G~G~~l~~~~~~~~~~~~l~~~i~~ 421 (473)
+. .++..+++ ||+.+| |.+.||++.|+|+|+++.. |. +.-+.+. |++..+. -+.++|.++|.+
T Consensus 268 ~~~~~~l~~~ad~--~v~~Sg-gi~~Ea~~~g~PvI~~~~~--~~--~~~~~~~-g~~~~~~------~~~~~i~~~i~~ 333 (363)
T cd03786 268 YLYFLLLLKNADL--VLTDSG-GIQEEASFLGVPVLNLRDR--TE--RPETVES-GTNVLVG------TDPEAILAAIEK 333 (363)
T ss_pred HHHHHHHHHcCcE--EEEcCc-cHHhhhhhcCCCEEeeCCC--Cc--cchhhhe-eeEEecC------CCHHHHHHHHHH
Confidence 43 45777886 999999 7788999999999998643 22 3334424 7665554 148999999999
Q ss_pred HhCCcHHHHHH
Q 042753 422 SVDGPRRERLK 432 (473)
Q Consensus 422 ~l~~~~~~~~~ 432 (473)
+++++ ...++
T Consensus 334 ll~~~-~~~~~ 343 (363)
T cd03786 334 LLSDE-FAYSL 343 (363)
T ss_pred HhcCc-hhhhc
Confidence 99986 44433
|
The enzyme serves to produce an activated form of ManNAc residues (UDP-ManNAc) for use in the biosynthesis of a variety of cell surface polysaccharides; The mammalian enzyme is bifunctional, catalyzing both the inversion of stereochemistry at C-2 and the hydrolysis of the UDP-sugar linkage to generate free ManNAc. It also catalyzes the phosphorylation of ManNAc to generate ManNAc 6-phosphate, a precursor to salic acids. In mammals, sialic acids are found at the termini of oligosaccharides in a large variety of cell surface glycoconjugates and are key mediators of cell-cell recognition events. Mutations in human members of this family have been associated with Sialuria, a rare disease caused by the disorders of sialic acid metabolism. This family belongs to the GT-B st |
| >cd03795 GT1_like_4 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.01 E-value=1.7e-07 Score=91.65 Aligned_cols=133 Identities=16% Similarity=0.110 Sum_probs=84.1
Q ss_pred CCcEEEEEeCCcccCCHHHHHHHHHHHHhCC-CcEEEEEeCCCccCCcccCCCCchhhHH---h-hcCCCeEeecCccHH
Q 042753 272 DESVVYVCFGSRYVLTAKQIHELAAALEKTD-VDFVYCVREPDERHASQDCGVLPDGFED---R-VAGRGYVIRGWSQQV 346 (473)
Q Consensus 272 ~~~~V~vs~Gs~~~~~~~~~~~~~~al~~~~-~~~i~~~~~~~~~~~~~~~~~lp~~~~~---~-~~~~nv~v~~~~pq~ 346 (473)
.+..+++..|+... ......+++++++.. .++++.-.+. ..+.+.+ + -..+||.+.+|+|+.
T Consensus 189 ~~~~~i~~~G~~~~--~K~~~~li~a~~~l~~~~l~i~G~g~-----------~~~~~~~~~~~~~~~~~V~~~g~v~~~ 255 (357)
T cd03795 189 AGRPFFLFVGRLVY--YKGLDVLLEAAAALPDAPLVIVGEGP-----------LEAELEALAAALGLLDRVRFLGRLDDE 255 (357)
T ss_pred CCCcEEEEeccccc--ccCHHHHHHHHHhccCcEEEEEeCCh-----------hHHHHHHHHHhcCCcceEEEcCCCCHH
Confidence 34567778888753 234555777777665 4444333221 1122222 1 124689999999975
Q ss_pred ---HhhhccCccceee---ccC-chhHHHHHhhCCeEecCcccccchhhHHHHHHHhcceEEeccCCCCCCCHHHHHHHH
Q 042753 347 ---AILRHKAVGAFLT---HCG-WNSVLEGVSAGVVMLTWPMDADQYTNAQLLVDQLGVGIRVGEGTRNIPESDELARLL 419 (473)
Q Consensus 347 ---~lL~~~~v~~~It---HgG-~~s~~eal~~GvP~l~~P~~~DQ~~na~rv~~~~G~G~~l~~~~~~~~~~~~l~~~i 419 (473)
.++..+++.++.+ +.| ..++.||+++|+|+|+....+....... .. +.|...+ .-+.+++.++|
T Consensus 256 ~~~~~~~~ad~~i~ps~~~~e~~g~~~~Ea~~~g~Pvi~~~~~~~~~~i~~---~~-~~g~~~~-----~~d~~~~~~~i 326 (357)
T cd03795 256 EKAALLAACDVFVFPSVERSEAFGIVLLEAMAFGKPVISTEIGTGGSYVNL---HG-VTGLVVP-----PGDPAALAEAI 326 (357)
T ss_pred HHHHHHHhCCEEEeCCcccccccchHHHHHHHcCCCEEecCCCCchhHHhh---CC-CceEEeC-----CCCHHHHHHHH
Confidence 4777788732222 234 3479999999999999765554433322 13 6787776 34799999999
Q ss_pred HHHhCCc
Q 042753 420 AQSVDGP 426 (473)
Q Consensus 420 ~~~l~~~ 426 (473)
.++++|+
T Consensus 327 ~~l~~~~ 333 (357)
T cd03795 327 RRLLEDP 333 (357)
T ss_pred HHHHHCH
Confidence 9999987
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP-linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >PRK14089 ipid-A-disaccharide synthase; Provisional | Back alignment and domain information |
|---|
Probab=98.99 E-value=5e-08 Score=93.62 Aligned_cols=161 Identities=14% Similarity=0.115 Sum_probs=97.5
Q ss_pred CcEEEEEeCCcccCCHHHHHHHHHHHHhCCCc-EEEEEeCCCccCCcccCCCCchhhHHhhcC-CCeEeecCccHHHhhh
Q 042753 273 ESVVYVCFGSRYVLTAKQIHELAAALEKTDVD-FVYCVREPDERHASQDCGVLPDGFEDRVAG-RGYVIRGWSQQVAILR 350 (473)
Q Consensus 273 ~~~V~vs~Gs~~~~~~~~~~~~~~al~~~~~~-~i~~~~~~~~~~~~~~~~~lp~~~~~~~~~-~nv~v~~~~pq~~lL~ 350 (473)
+++|.+--||..+--...+..++++.++...+ .++.+.... + . +.+.+.... ..+.+.+ .-.+++.
T Consensus 167 ~~~I~llPGSR~~Ei~~llP~~~~aa~~L~~~~~~~~i~~a~--------~-~-~~i~~~~~~~~~~~~~~--~~~~~m~ 234 (347)
T PRK14089 167 EGTIAFMPGSRKSEIKRLMPIFKELAKKLEGKEKILVVPSFF--------K-G-KDLKEIYGDISEFEISY--DTHKALL 234 (347)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHHHHHHHhhcCcEEEEeCCC--------c-H-HHHHHHHhcCCCcEEec--cHHHHHH
Confidence 47899999998653334555455555432211 233333321 1 1 222222211 1222222 3456889
Q ss_pred ccCccceeeccCchhHHHHHhhCCeEecCcc--cccchhhHHHHHH--HhcceEEe-------------ccCCCCCCCHH
Q 042753 351 HKAVGAFLTHCGWNSVLEGVSAGVVMLTWPM--DADQYTNAQLLVD--QLGVGIRV-------------GEGTRNIPESD 413 (473)
Q Consensus 351 ~~~v~~~ItHgG~~s~~eal~~GvP~l~~P~--~~DQ~~na~rv~~--~~G~G~~l-------------~~~~~~~~~~~ 413 (473)
.+++ .|+-+|..|+ |+...|+||++ ++ ..=|+.+|+++.+ +.|+.-.+ - +++.|++
T Consensus 235 ~aDl--al~~SGT~TL-E~al~g~P~Vv-~Yk~~~lty~iak~lv~~~~igL~Nii~~~~~~~~vvPEll---Q~~~t~~ 307 (347)
T PRK14089 235 EAEF--AFICSGTATL-EAALIGTPFVL-AYKAKAIDYFIAKMFVKLKHIGLANIFFDFLGKEPLHPELL---QEFVTVE 307 (347)
T ss_pred hhhH--HHhcCcHHHH-HHHHhCCCEEE-EEeCCHHHHHHHHHHHcCCeeehHHHhcCCCcccccCchhh---cccCCHH
Confidence 9997 9999999999 99999999988 44 4578889999872 11333222 3 5789999
Q ss_pred HHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHH
Q 042753 414 ELARLLAQSVDGPRRERLKARELSGAALSAVVKGGSSDRDLNDFIK 459 (473)
Q Consensus 414 ~l~~~i~~~l~~~~~~~~~a~~~~~~~~~~~~~~gs~~~~~~~~~~ 459 (473)
.|.+++.+ ... +++++...++++.+ . +++++++++.+++
T Consensus 308 ~la~~i~~-~~~-~~~~~~~~~l~~~l----~-~~a~~~~A~~i~~ 346 (347)
T PRK14089 308 NLLKAYKE-MDR-EKFFKKSKELREYL----K-HGSAKNVAKILKE 346 (347)
T ss_pred HHHHHHHH-HHH-HHHHHHHHHHHHHh----c-CCHHHHHHHHHhc
Confidence 99999987 233 26666666666665 2 3556666655543
|
|
| >TIGR03449 mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-inositol-1-phosphate 1-alpha-D-N-acetylglucosaminyltransferase | Back alignment and domain information |
|---|
Probab=98.97 E-value=2.9e-06 Score=84.75 Aligned_cols=114 Identities=14% Similarity=0.112 Sum_probs=74.8
Q ss_pred CCCeEeecCccHH---HhhhccCccceee---c-cCchhHHHHHhhCCeEecCcccccchhhHHHHHHHhcceEEeccCC
Q 042753 334 GRGYVIRGWSQQV---AILRHKAVGAFLT---H-CGWNSVLEGVSAGVVMLTWPMDADQYTNAQLLVDQLGVGIRVGEGT 406 (473)
Q Consensus 334 ~~nv~v~~~~pq~---~lL~~~~v~~~It---H-gG~~s~~eal~~GvP~l~~P~~~DQ~~na~rv~~~~G~G~~l~~~~ 406 (473)
.+++.+.+++|+. ++|+.+++ +|. + |...+++||+++|+|+|+.... .....+.+. +.|...+
T Consensus 282 ~~~v~~~g~~~~~~~~~~l~~ad~--~v~ps~~E~~g~~~lEAma~G~Pvi~~~~~----~~~e~i~~~-~~g~~~~--- 351 (405)
T TIGR03449 282 ADRVRFLPPRPPEELVHVYRAADV--VAVPSYNESFGLVAMEAQACGTPVVAARVG----GLPVAVADG-ETGLLVD--- 351 (405)
T ss_pred CceEEECCCCCHHHHHHHHHhCCE--EEECCCCCCcChHHHHHHHcCCCEEEecCC----CcHhhhccC-CceEECC---
Confidence 3578888999864 47888987 553 2 3345899999999999986543 344455533 5677766
Q ss_pred CCCCCHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHhh
Q 042753 407 RNIPESDELARLLAQSVDGPRRERLKARELSGAALSAVVKGGSSDRDLNDFIKRINEL 464 (473)
Q Consensus 407 ~~~~~~~~l~~~i~~~l~~~~~~~~~a~~~~~~~~~~~~~~gs~~~~~~~~~~~~~~~ 464 (473)
.-+.+++.++|.++++++ ..+++..+-+.... +.-+-+..++++++...+.
T Consensus 352 --~~d~~~la~~i~~~l~~~-~~~~~~~~~~~~~~----~~fsw~~~~~~~~~~y~~~ 402 (405)
T TIGR03449 352 --GHDPADWADALARLLDDP-RTRIRMGAAAVEHA----AGFSWAATADGLLSSYRDA 402 (405)
T ss_pred --CCCHHHHHHHHHHHHhCH-HHHHHHHHHHHHHH----HhCCHHHHHHHHHHHHHHH
Confidence 347899999999999986 44433322222221 1245666677777766553
|
Members of this protein family, found exclusively in the Actinobacteria, are MshA, the glycosyltransferase of mycothiol biosynthesis. Mycothiol replaces glutathione in these species. |
| >PF04007 DUF354: Protein of unknown function (DUF354); InterPro: IPR007152 Members of this family are around 350 amino acids in length | Back alignment and domain information |
|---|
Probab=98.96 E-value=4.9e-07 Score=86.11 Aligned_cols=300 Identities=16% Similarity=0.176 Sum_probs=159.9
Q ss_pred cEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCCCC--hhhhhhhccCCCCCCeeEEEcCCCCCCCCCChhhHHHHH
Q 042753 6 AHILVYPFPTSGHIIPLLDLTNRLLTLGLNVTVLITQNN--LPLLDSLNANHPSTSLQSLVLPQPKWPAGSPATRLLKFM 83 (473)
Q Consensus 6 ~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~--~~~i~~~~~~~~~~~~~f~~l~~~~~~~~~~~~~~~~~~ 83 (473)
|||.+--. ..-|+.-+.++.++|.++||+|.+.+-... .+.++.. ++++..+... + ......+.
T Consensus 1 MkIwiDi~-~p~hvhfFk~~I~eL~~~GheV~it~R~~~~~~~LL~~y-------g~~y~~iG~~---g---~~~~~Kl~ 66 (335)
T PF04007_consen 1 MKIWIDIT-HPAHVHFFKNIIRELEKRGHEVLITARDKDETEELLDLY-------GIDYIVIGKH---G---DSLYGKLL 66 (335)
T ss_pred CeEEEECC-CchHHHHHHHHHHHHHhCCCEEEEEEeccchHHHHHHHc-------CCCeEEEcCC---C---CCHHHHHH
Confidence 45654332 223999999999999999999999987643 3344444 6888777531 1 11112222
Q ss_pred HHHHHHhhHHHHHHHhcCCCCCcEEEeCCCcchHHHHHHHhCCCcEEEecchHHHHHHHHhhhccCCCCCCCCCCCcccc
Q 042753 84 RVLRELHYPALLDWFKSHPSPPVAILSDFFLGWTQGLAAELGLPRVVFSPSGAFALSVSFAMWTDLPTNDDPDNVDALVS 163 (473)
Q Consensus 84 ~~~~~~~~~~l~~~l~~~~~~pD~VV~D~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~ 163 (473)
... ...-.+.+++++. +||++|+- ....+..+|.-+|||+|.+.-....... + -..
T Consensus 67 ~~~--~R~~~l~~~~~~~--~pDv~is~-~s~~a~~va~~lgiP~I~f~D~e~a~~~---~----------------~Lt 122 (335)
T PF04007_consen 67 ESI--ERQYKLLKLIKKF--KPDVAISF-GSPEAARVAFGLGIPSIVFNDTEHAIAQ---N----------------RLT 122 (335)
T ss_pred HHH--HHHHHHHHHHHhh--CCCEEEec-CcHHHHHHHHHhCCCeEEEecCchhhcc---c----------------eee
Confidence 222 2234566777788 99999975 3367788999999999998655322100 0 000
Q ss_pred CCCCCCCCCCCccccchhhhccCCCCCchHHHHHHhhhccCCcEEe-ecchHHhhHHHHHHHHHhhCCCcEEEeccCCCC
Q 042753 164 FPRVPNCPVYPWYQISHLYRTLKEGDPDWDLHRSNMMANKTSWGIV-FNSFAELERVYIDHMKKEMGHDRVWAVGPVLPP 242 (473)
Q Consensus 164 ~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~s~~~le~~~~~~~~~~~~~~~~~~vGpl~~~ 242 (473)
+| +.+. -..|..+ -...+.+.... ..+. .+.+. ...++=|+.
T Consensus 123 ~P-la~~-----i~~P~~~--------~~~~~~~~G~~----~~i~~y~G~~-----------------E~ayl~~F~-- 165 (335)
T PF04007_consen 123 LP-LADV-----IITPEAI--------PKEFLKRFGAK----NQIRTYNGYK-----------------ELAYLHPFK-- 165 (335)
T ss_pred hh-cCCe-----eECCccc--------CHHHHHhcCCc----CCEEEECCee-----------------eEEeecCCC--
Confidence 11 0000 0000000 00001111000 0011 12221 112222211
Q ss_pred CCcchhhccCCCCCCCChhhhHHHhcCCCCCcEEEEEeCCccc----CCHHHHHHHHHHHHhCCCcEEEEEeCCCccCCc
Q 042753 243 DDDLVESMCRGGSSSVPAHDVLTWLDSRRDESVVYVCFGSRYV----LTAKQIHELAAALEKTDVDFVYCVREPDERHAS 318 (473)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~V~vs~Gs~~~----~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~ 318 (473)
.+++..+-++. .+++.|++=+-+..+ .....+..+++.|++.+..++...+...
T Consensus 166 ----------------Pd~~vl~~lg~-~~~~yIvvR~~~~~A~y~~~~~~i~~~ii~~L~~~~~~vV~ipr~~~----- 223 (335)
T PF04007_consen 166 ----------------PDPEVLKELGL-DDEPYIVVRPEAWKASYDNGKKSILPEIIEELEKYGRNVVIIPRYED----- 223 (335)
T ss_pred ----------------CChhHHHHcCC-CCCCEEEEEeccccCeeecCccchHHHHHHHHHhhCceEEEecCCcc-----
Confidence 22334444543 356788877766422 2345577789999988877444443321
Q ss_pred ccCCCCchhhHHhhcCCCeEeecCccHHHhhhccCccceeeccCchhHHHHHhhCCeEecCcccccchhhHHHHHHHhcc
Q 042753 319 QDCGVLPDGFEDRVAGRGYVIRGWSQQVAILRHKAVGAFLTHCGWNSVLEGVSAGVVMLTWPMDADQYTNAQLLVDQLGV 398 (473)
Q Consensus 319 ~~~~~lp~~~~~~~~~~nv~v~~~~pq~~lL~~~~v~~~ItHgG~~s~~eal~~GvP~l~~P~~~DQ~~na~rv~~~~G~ 398 (473)
.++ ..++. +-.+...-+.-.++|.++++ +|+-|| ....||...|+|.|.+ +.++-...-+.+.++ |+
T Consensus 224 -----~~~-~~~~~--~~~i~~~~vd~~~Ll~~a~l--~Ig~gg-TMa~EAA~LGtPaIs~-~~g~~~~vd~~L~~~-Gl 290 (335)
T PF04007_consen 224 -----QRE-LFEKY--GVIIPPEPVDGLDLLYYADL--VIGGGG-TMAREAALLGTPAISC-FPGKLLAVDKYLIEK-GL 290 (335)
T ss_pred -----hhh-HHhcc--CccccCCCCCHHHHHHhcCE--EEeCCc-HHHHHHHHhCCCEEEe-cCCcchhHHHHHHHC-CC
Confidence 111 11111 11222355566689999997 888777 7889999999999975 222322333455545 65
Q ss_pred eEEeccCCCCCCCHHHHHHHHHHH
Q 042753 399 GIRVGEGTRNIPESDELARLLAQS 422 (473)
Q Consensus 399 G~~l~~~~~~~~~~~~l~~~i~~~ 422 (473)
-.+ ..+.+++.+.+.+.
T Consensus 291 l~~-------~~~~~ei~~~v~~~ 307 (335)
T PF04007_consen 291 LYH-------STDPDEIVEYVRKN 307 (335)
T ss_pred eEe-------cCCHHHHHHHHHHh
Confidence 322 34677776655443
|
They are found in archaea and some bacteria and have no known function. |
| >cd03822 GT1_ecORF704_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=98.95 E-value=4.9e-06 Score=81.33 Aligned_cols=109 Identities=13% Similarity=0.160 Sum_probs=68.5
Q ss_pred CCCeEeec-CccHH---HhhhccCccceee----c--cCchhHHHHHhhCCeEecCcccccchhhHHHHHHHhcceEEec
Q 042753 334 GRGYVIRG-WSQQV---AILRHKAVGAFLT----H--CGWNSVLEGVSAGVVMLTWPMDADQYTNAQLLVDQLGVGIRVG 403 (473)
Q Consensus 334 ~~nv~v~~-~~pq~---~lL~~~~v~~~It----H--gG~~s~~eal~~GvP~l~~P~~~DQ~~na~rv~~~~G~G~~l~ 403 (473)
.+++.... |+|+. .++..+++ +|. . |..+++.||+++|+|+|+.+..+ ...+... +.|...+
T Consensus 246 ~~~v~~~~~~~~~~~~~~~~~~ad~--~v~ps~~e~~~~~~~~~Ea~a~G~PvI~~~~~~-----~~~i~~~-~~g~~~~ 317 (366)
T cd03822 246 ADRVIFINRYLPDEELPELFSAADV--VVLPYRSADQTQSGVLAYAIGFGKPVISTPVGH-----AEEVLDG-GTGLLVP 317 (366)
T ss_pred CCcEEEecCcCCHHHHHHHHhhcCE--EEecccccccccchHHHHHHHcCCCEEecCCCC-----hheeeeC-CCcEEEc
Confidence 45666654 58864 47777887 552 2 34568999999999999987654 2333324 6777776
Q ss_pred cCCCCCCCHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHH
Q 042753 404 EGTRNIPESDELARLLAQSVDGPRRERLKARELSGAALSAVVKGGSSDRDLNDFIKR 460 (473)
Q Consensus 404 ~~~~~~~~~~~l~~~i~~~l~~~~~~~~~a~~~~~~~~~~~~~~gs~~~~~~~~~~~ 460 (473)
.-+.+++.++|.++++++ ..+++. ++..++..+. -+.+..++++.+.
T Consensus 318 -----~~d~~~~~~~l~~l~~~~-~~~~~~---~~~~~~~~~~-~s~~~~~~~~~~~ 364 (366)
T cd03822 318 -----PGDPAALAEAIRRLLADP-ELAQAL---RARAREYARA-MSWERVAERYLRL 364 (366)
T ss_pred -----CCCHHHHHHHHHHHHcCh-HHHHHH---HHHHHHHHhh-CCHHHHHHHHHHH
Confidence 235899999999999985 333322 2222222123 4556666666554
|
ORF704 in E. coli has been shown to be involved in the biosynthesis of O-specific mannose homopolysaccharides. |
| >cd03821 GT1_Bme6_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=98.93 E-value=4.8e-06 Score=81.35 Aligned_cols=79 Identities=20% Similarity=0.188 Sum_probs=58.2
Q ss_pred CCCeEeecCccHHH---hhhccCccceeec----cCchhHHHHHhhCCeEecCcccccchhhHHHHHHHhcceEEeccCC
Q 042753 334 GRGYVIRGWSQQVA---ILRHKAVGAFLTH----CGWNSVLEGVSAGVVMLTWPMDADQYTNAQLLVDQLGVGIRVGEGT 406 (473)
Q Consensus 334 ~~nv~v~~~~pq~~---lL~~~~v~~~ItH----gG~~s~~eal~~GvP~l~~P~~~DQ~~na~rv~~~~G~G~~l~~~~ 406 (473)
.+++.+.+|+++.+ ++..+++ +|.- |-.+++.||+++|+|+|+.+. ......+. . +.|....
T Consensus 261 ~~~v~~~g~~~~~~~~~~~~~adv--~v~ps~~e~~~~~~~Eama~G~PvI~~~~----~~~~~~~~-~-~~~~~~~--- 329 (375)
T cd03821 261 EDRVTFTGMLYGEDKAAALADADL--FVLPSHSENFGIVVAEALACGTPVVTTDK----VPWQELIE-Y-GCGWVVD--- 329 (375)
T ss_pred cceEEEcCCCChHHHHHHHhhCCE--EEeccccCCCCcHHHHHHhcCCCEEEcCC----CCHHHHhh-c-CceEEeC---
Confidence 46788889999654 5788887 4432 225689999999999999653 34455555 4 7787766
Q ss_pred CCCCCHHHHHHHHHHHhCCc
Q 042753 407 RNIPESDELARLLAQSVDGP 426 (473)
Q Consensus 407 ~~~~~~~~l~~~i~~~l~~~ 426 (473)
. +.+++.++|.++++++
T Consensus 330 ~---~~~~~~~~i~~l~~~~ 346 (375)
T cd03821 330 D---DVDALAAALRRALELP 346 (375)
T ss_pred C---ChHHHHHHHHHHHhCH
Confidence 2 3499999999999986
|
Bme6 in Brucella melitensis has been shown to be involved in the biosynthesis of a polysaccharide. |
| >cd03807 GT1_WbnK_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=98.86 E-value=9.2e-06 Score=79.01 Aligned_cols=108 Identities=18% Similarity=0.171 Sum_probs=67.5
Q ss_pred CCeEeecCcc-HHHhhhccCccceeeccC----chhHHHHHhhCCeEecCcccccchhhHHHHHHHhcceEEeccCCCCC
Q 042753 335 RGYVIRGWSQ-QVAILRHKAVGAFLTHCG----WNSVLEGVSAGVVMLTWPMDADQYTNAQLLVDQLGVGIRVGEGTRNI 409 (473)
Q Consensus 335 ~nv~v~~~~p-q~~lL~~~~v~~~ItHgG----~~s~~eal~~GvP~l~~P~~~DQ~~na~rv~~~~G~G~~l~~~~~~~ 409 (473)
.++....... ..+++..+++ +|..+. .+++.||+++|+|+|+.. ...+...+.+ .|..++ .
T Consensus 251 ~~v~~~g~~~~~~~~~~~adi--~v~ps~~e~~~~~~~Ea~a~g~PvI~~~----~~~~~e~~~~---~g~~~~-----~ 316 (365)
T cd03807 251 DKVILLGERSDVPALLNALDV--FVLSSLSEGFPNVLLEAMACGLPVVATD----VGDNAELVGD---TGFLVP-----P 316 (365)
T ss_pred ceEEEccccccHHHHHHhCCE--EEeCCccccCCcHHHHHHhcCCCEEEcC----CCChHHHhhc---CCEEeC-----C
Confidence 4555555443 3568888887 665443 479999999999999854 3445555552 465565 2
Q ss_pred CCHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHH
Q 042753 410 PESDELARLLAQSVDGPRRERLKARELSGAALSAVVKGGSSDRDLNDFIKR 460 (473)
Q Consensus 410 ~~~~~l~~~i~~~l~~~~~~~~~a~~~~~~~~~~~~~~gs~~~~~~~~~~~ 460 (473)
-+.+++.++|.+++++++.+++..+...+.+ .+.-|-+..++++++.
T Consensus 317 ~~~~~l~~~i~~l~~~~~~~~~~~~~~~~~~----~~~~s~~~~~~~~~~~ 363 (365)
T cd03807 317 GDPEALAEAIEALLADPALRQALGEAARERI----EENFSIEAMVEAYEEL 363 (365)
T ss_pred CCHHHHHHHHHHHHhChHHHHHHHHHHHHHH----HHhCCHHHHHHHHHHH
Confidence 3689999999999998623333233333333 3334556666666553
|
WbnK in Shigella dysenteriae has been shown to be involved in the type 7 O-antigen biosynthesis. |
| >cd03799 GT1_amsK_like This is a family of GT1 glycosyltransferases found specifically in certain bacteria | Back alignment and domain information |
|---|
Probab=98.86 E-value=5e-06 Score=81.11 Aligned_cols=135 Identities=16% Similarity=0.172 Sum_probs=81.0
Q ss_pred CCcEEEEEeCCccc-CCHHHHHHHHHHHHhC--CCcEEEEEeCCCccCCcccCCCCchhhHHhh-cCCCeEeecCccHHH
Q 042753 272 DESVVYVCFGSRYV-LTAKQIHELAAALEKT--DVDFVYCVREPDERHASQDCGVLPDGFEDRV-AGRGYVIRGWSQQVA 347 (473)
Q Consensus 272 ~~~~V~vs~Gs~~~-~~~~~~~~~~~al~~~--~~~~i~~~~~~~~~~~~~~~~~lp~~~~~~~-~~~nv~v~~~~pq~~ 347 (473)
.++++++.+|+... ...+.+.+.+..+.+. +.++++.-.... .+.+- .+.++. ..+|+.+.+++|+.+
T Consensus 177 ~~~~~i~~~g~~~~~k~~~~l~~~~~~l~~~~~~~~l~i~G~~~~-------~~~~~-~~~~~~~~~~~v~~~g~~~~~~ 248 (355)
T cd03799 177 GEPLRILSVGRLVEKKGLDYLLEALALLKDRGIDFRLDIVGDGPL-------RDELE-ALIAELGLEDRVTLLGAKSQEE 248 (355)
T ss_pred CCCeEEEEEeeeccccCHHHHHHHHHHHhhcCCCeEEEEEECCcc-------HHHHH-HHHHHcCCCCeEEECCcCChHH
Confidence 45567777888643 2334444444444443 334333322211 01111 111111 246788899998654
Q ss_pred ---hhhccCccceee----------ccCchhHHHHHhhCCeEecCcccccchhhHHHHHHHhcceEEeccCCCCCCCHHH
Q 042753 348 ---ILRHKAVGAFLT----------HCGWNSVLEGVSAGVVMLTWPMDADQYTNAQLLVDQLGVGIRVGEGTRNIPESDE 414 (473)
Q Consensus 348 ---lL~~~~v~~~It----------HgG~~s~~eal~~GvP~l~~P~~~DQ~~na~rv~~~~G~G~~l~~~~~~~~~~~~ 414 (473)
++..+++ +|. -|..+++.||+++|+|+|+.+.. .....+. .-..|...+ .-+.++
T Consensus 249 l~~~~~~adi--~l~~s~~~~~~~~e~~~~~~~Ea~a~G~Pvi~~~~~----~~~~~i~-~~~~g~~~~-----~~~~~~ 316 (355)
T cd03799 249 VRELLRAADL--FVLPSVTAADGDREGLPVVLMEAMAMGLPVISTDVS----GIPELVE-DGETGLLVP-----PGDPEA 316 (355)
T ss_pred HHHHHHhCCE--EEecceecCCCCccCccHHHHHHHHcCCCEEecCCC----Ccchhhh-CCCceEEeC-----CCCHHH
Confidence 6677887 554 34457899999999999987543 2333444 414787776 347899
Q ss_pred HHHHHHHHhCCc
Q 042753 415 LARLLAQSVDGP 426 (473)
Q Consensus 415 l~~~i~~~l~~~ 426 (473)
+.++|.++++++
T Consensus 317 l~~~i~~~~~~~ 328 (355)
T cd03799 317 LADAIERLLDDP 328 (355)
T ss_pred HHHHHHHHHhCH
Confidence 999999999987
|
amsK in Erwinia amylovora, has been reported to be involved in the biosynthesis of amylovoran, a exopolysaccharide acting as a virulence factor. |
| >cd03796 GT1_PIG-A_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=98.85 E-value=5.1e-06 Score=82.76 Aligned_cols=166 Identities=13% Similarity=0.128 Sum_probs=93.6
Q ss_pred CCcEEEEEeCCccc-CCHHHHHHHHHHHHhC--CCcEEEEEeCCCccCCcccCCCCchhhH---Hhhc-CCCeEeecCcc
Q 042753 272 DESVVYVCFGSRYV-LTAKQIHELAAALEKT--DVDFVYCVREPDERHASQDCGVLPDGFE---DRVA-GRGYVIRGWSQ 344 (473)
Q Consensus 272 ~~~~V~vs~Gs~~~-~~~~~~~~~~~al~~~--~~~~i~~~~~~~~~~~~~~~~~lp~~~~---~~~~-~~nv~v~~~~p 344 (473)
+++.+++..|.... ...+.+.+.+..+.+. +.++++ ++... ..+.+. ++.. .+++...+|+|
T Consensus 191 ~~~~~i~~~grl~~~Kg~~~li~a~~~l~~~~~~~~l~i-~G~g~----------~~~~l~~~~~~~~l~~~v~~~G~~~ 259 (398)
T cd03796 191 NDKITIVVISRLVYRKGIDLLVGIIPEICKKHPNVRFII-GGDGP----------KRILLEEMREKYNLQDRVELLGAVP 259 (398)
T ss_pred CCceEEEEEeccchhcCHHHHHHHHHHHHhhCCCEEEEE-EeCCc----------hHHHHHHHHHHhCCCCeEEEeCCCC
Confidence 35577888887753 2334444444444332 334333 33321 112222 2222 34588889998
Q ss_pred HHH---hhhccCccceee---ccCc-hhHHHHHhhCCeEecCcccccchhhHHHHHHHhcceEEeccCCCCCCCHHHHHH
Q 042753 345 QVA---ILRHKAVGAFLT---HCGW-NSVLEGVSAGVVMLTWPMDADQYTNAQLLVDQLGVGIRVGEGTRNIPESDELAR 417 (473)
Q Consensus 345 q~~---lL~~~~v~~~It---HgG~-~s~~eal~~GvP~l~~P~~~DQ~~na~rv~~~~G~G~~l~~~~~~~~~~~~l~~ 417 (473)
+.+ +++.+++ +|. +-|. .++.||+++|+|+|+.+..+ ....+. . |.+.... .+.+++.+
T Consensus 260 ~~~~~~~l~~ad~--~v~pS~~E~~g~~~~EAma~G~PVI~s~~gg----~~e~i~-~-~~~~~~~------~~~~~l~~ 325 (398)
T cd03796 260 HERVRDVLVQGHI--FLNTSLTEAFCIAIVEAASCGLLVVSTRVGG----IPEVLP-P-DMILLAE------PDVESIVR 325 (398)
T ss_pred HHHHHHHHHhCCE--EEeCChhhccCHHHHHHHHcCCCEEECCCCC----chhhee-C-CceeecC------CCHHHHHH
Confidence 644 7778887 553 2244 49999999999999976642 233443 3 4443332 26899999
Q ss_pred HHHHHhCCcHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHhhcc
Q 042753 418 LLAQSVDGPRRERLKARELSGAALSAVVKGGSSDRDLNDFIKRINELKS 466 (473)
Q Consensus 418 ~i~~~l~~~~~~~~~a~~~~~~~~~~~~~~gs~~~~~~~~~~~~~~~~~ 466 (473)
++.+++++. .-.. .+....++.+.+.-|-+..++++++...+..+
T Consensus 326 ~l~~~l~~~-~~~~---~~~~~~~~~~~~~fs~~~~~~~~~~~y~~l~~ 370 (398)
T cd03796 326 KLEEAISIL-RTGK---HDPWSFHNRVKKMYSWEDVAKRTEKVYDRILQ 370 (398)
T ss_pred HHHHHHhCh-hhhh---hHHHHHHHHHHhhCCHHHHHHHHHHHHHHHhc
Confidence 999999864 2111 11122222224456677777777777766543
|
Phosphatidylinositol glycan-class A (PIG-A), an X-linked gene in humans, is necessary for the synthesis of N-acetylglucosaminyl-phosphatidylinositol, a very early intermediate in glycosyl phosphatidylinositol (GPI)-anchor biosynthesis. The GPI-anchor is an important cellular structure that facilitates the attachment of many proteins to cell surfaces. Somatic mutations in PIG-A have been associated with Paroxysmal Nocturnal Hemoglobinuria (PNH), an acquired hematological disorder. |
| >cd03805 GT1_ALG2_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=98.84 E-value=1.2e-05 Score=79.81 Aligned_cols=80 Identities=16% Similarity=0.160 Sum_probs=57.6
Q ss_pred CCCeEeecCccHH---HhhhccCccceeec----cCchhHHHHHhhCCeEecCcccccchhhHHHHHHHhcceEEeccCC
Q 042753 334 GRGYVIRGWSQQV---AILRHKAVGAFLTH----CGWNSVLEGVSAGVVMLTWPMDADQYTNAQLLVDQLGVGIRVGEGT 406 (473)
Q Consensus 334 ~~nv~v~~~~pq~---~lL~~~~v~~~ItH----gG~~s~~eal~~GvP~l~~P~~~DQ~~na~rv~~~~G~G~~l~~~~ 406 (473)
.+++.+.+++|+. .+|..+++ ++.. |-..++.||+++|+|+|+.-.. .....+.+. +.|...+
T Consensus 279 ~~~V~f~g~~~~~~~~~~l~~ad~--~l~~s~~E~~g~~~lEAma~G~PvI~s~~~----~~~e~i~~~-~~g~~~~--- 348 (392)
T cd03805 279 EDQVIFLPSISDSQKELLLSSARA--LLYTPSNEHFGIVPLEAMYAGKPVIACNSG----GPLETVVDG-ETGFLCE--- 348 (392)
T ss_pred CceEEEeCCCChHHHHHHHhhCeE--EEECCCcCCCCchHHHHHHcCCCEEEECCC----CcHHHhccC-CceEEeC---
Confidence 3678889999976 46788887 5532 2235789999999999987443 233445533 5676654
Q ss_pred CCCCCHHHHHHHHHHHhCCc
Q 042753 407 RNIPESDELARLLAQSVDGP 426 (473)
Q Consensus 407 ~~~~~~~~l~~~i~~~l~~~ 426 (473)
.+.+++.++|.++++++
T Consensus 349 ---~~~~~~a~~i~~l~~~~ 365 (392)
T cd03805 349 ---PTPEEFAEAMLKLANDP 365 (392)
T ss_pred ---CCHHHHHHHHHHHHhCh
Confidence 26899999999999987
|
ALG2, a 1,3-mannosyltransferase, in yeast catalyzes the mannosylation of Man(2)GlcNAc(2)-dolichol diphosphate and Man(1)GlcNAc(2)-dolichol diphosphate to form Man(3)GlcNAc(2)-dolichol diphosphate. A deficiency of this enzyme causes an abnormal accumulation of Man1GlcNAc2-PP-dolichol and Man2GlcNAc2-PP-dolichol, which is associated with a type of congenital disorders of glycosylation (CDG), designated CDG-Ii, in humans. |
| >COG1519 KdtA 3-deoxy-D-manno-octulosonic-acid transferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=98.81 E-value=5.7e-06 Score=79.11 Aligned_cols=309 Identities=16% Similarity=0.129 Sum_probs=179.5
Q ss_pred EEEcCCCCCChHHHHHHHHHHHhC--CCeEEEEe-CCCChhhhhhhccCCCCCCeeEEEcCCCCCCCCCChhhHHHHHHH
Q 042753 9 LVYPFPTSGHIIPLLDLTNRLLTL--GLNVTVLI-TQNNLPLLDSLNANHPSTSLQSLVLPQPKWPAGSPATRLLKFMRV 85 (473)
Q Consensus 9 l~~~~~~~GH~~p~l~La~~L~~r--Gh~Vt~~~-~~~~~~~i~~~~~~~~~~~~~f~~l~~~~~~~~~~~~~~~~~~~~ 85 (473)
+.+-.-+.|-++-.++|.++|.++ ++.|++.+ |+.-.+.+++... +.+...-+|++
T Consensus 52 vWiHaaSVGEv~a~~pLv~~l~~~~P~~~ilvTt~T~Tg~e~a~~~~~----~~v~h~YlP~D----------------- 110 (419)
T COG1519 52 VWIHAASVGEVLAALPLVRALRERFPDLRILVTTMTPTGAERAAALFG----DSVIHQYLPLD----------------- 110 (419)
T ss_pred EEEEecchhHHHHHHHHHHHHHHhCCCCCEEEEecCccHHHHHHHHcC----CCeEEEecCcC-----------------
Confidence 334444779999999999999998 89999888 4544555554421 22333334531
Q ss_pred HHHHhhHHHHHHHhcCCCCCcEEEeCCCcc--hHHHHHHHhCCCcEEEecchHHHHHHHHhhhccCCCCCCCCCCCcccc
Q 042753 86 LRELHYPALLDWFKSHPSPPVAILSDFFLG--WTQGLAAELGLPRVVFSPSGAFALSVSFAMWTDLPTNDDPDNVDALVS 163 (473)
Q Consensus 86 ~~~~~~~~l~~~l~~~~~~pD~VV~D~~~~--~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~ 163 (473)
....+.+++..+ +||++|.-.... ....-+++.|||.+.+..-.. ..
T Consensus 111 ----~~~~v~rFl~~~--~P~l~Ii~EtElWPnli~e~~~~~~p~~LvNaRLS--------------------~r----- 159 (419)
T COG1519 111 ----LPIAVRRFLRKW--RPKLLIIMETELWPNLINELKRRGIPLVLVNARLS--------------------DR----- 159 (419)
T ss_pred ----chHHHHHHHHhc--CCCEEEEEeccccHHHHHHHHHcCCCEEEEeeeec--------------------hh-----
Confidence 113456778888 999887554434 445777889999998632210 00
Q ss_pred CCCCCCCCCCCccccchhhhccCCCCCchHHHHHHhh-hccCCcEEeecchHHhhHHHHHHHHHhhCCCcEEEeccCCCC
Q 042753 164 FPRVPNCPVYPWYQISHLYRTLKEGDPDWDLHRSNMM-ANKTSWGIVFNSFAELERVYIDHMKKEMGHDRVWAVGPVLPP 242 (473)
Q Consensus 164 ~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~s~~~le~~~~~~~~~~~~~~~~~~vGpl~~~ 242 (473)
....+..+....+ .+.+-..++..|-.+-+ -+. .++-+.+...|-+=..
T Consensus 160 ------------------------S~~~y~k~~~~~~~~~~~i~li~aQse~D~~--Rf~----~LGa~~v~v~GNlKfd 209 (419)
T COG1519 160 ------------------------SFARYAKLKFLARLLFKNIDLILAQSEEDAQ--RFR----SLGAKPVVVTGNLKFD 209 (419)
T ss_pred ------------------------hhHHHHHHHHHHHHHHHhcceeeecCHHHHH--HHH----hcCCcceEEecceeec
Confidence 0001111222222 22233444444422222 111 2332567888866433
Q ss_pred CCcchhhccCCCCCCCCh---hhhHHHhcCCCCCcEEEEEeCCcccCCHHHHHHHHHHHHhC--CCcEEEEEeCCCccCC
Q 042753 243 DDDLVESMCRGGSSSVPA---HDVLTWLDSRRDESVVYVCFGSRYVLTAKQIHELAAALEKT--DVDFVYCVREPDERHA 317 (473)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~---~~~~~~l~~~~~~~~V~vs~Gs~~~~~~~~~~~~~~al~~~--~~~~i~~~~~~~~~~~ 317 (473)
..+ ..... ..+...++. + ..+.|..+|. ....+..-+...+|.+. +..+||+-+.+
T Consensus 210 ~~~----------~~~~~~~~~~~r~~l~~--~-r~v~iaaSTH-~GEeei~l~~~~~l~~~~~~~llIlVPRHp----- 270 (419)
T COG1519 210 IEP----------PPQLAAELAALRRQLGG--H-RPVWVAASTH-EGEEEIILDAHQALKKQFPNLLLILVPRHP----- 270 (419)
T ss_pred CCC----------ChhhHHHHHHHHHhcCC--C-CceEEEecCC-CchHHHHHHHHHHHHhhCCCceEEEecCCh-----
Confidence 301 01111 234444443 2 3466666663 33455566677777654 46777777665
Q ss_pred cccCCCCchhhHHhhcCC-----------------CeEeecCccH-HHhhhccCc---cc-eeeccCchhHHHHHhhCCe
Q 042753 318 SQDCGVLPDGFEDRVAGR-----------------GYVIRGWSQQ-VAILRHKAV---GA-FLTHCGWNSVLEGVSAGVV 375 (473)
Q Consensus 318 ~~~~~~lp~~~~~~~~~~-----------------nv~v~~~~pq-~~lL~~~~v---~~-~ItHgG~~s~~eal~~GvP 375 (473)
|.+++ +.+..... +|++.+-+-- ..++.-+++ |+ ++-+||.| .+|++++|+|
T Consensus 271 ----ERf~~-v~~l~~~~gl~~~~rS~~~~~~~~tdV~l~DtmGEL~l~y~~adiAFVGGSlv~~GGHN-~LEpa~~~~p 344 (419)
T COG1519 271 ----ERFKA-VENLLKRKGLSVTRRSQGDPPFSDTDVLLGDTMGELGLLYGIADIAFVGGSLVPIGGHN-PLEPAAFGTP 344 (419)
T ss_pred ----hhHHH-HHHHHHHcCCeEEeecCCCCCCCCCcEEEEecHhHHHHHHhhccEEEECCcccCCCCCC-hhhHHHcCCC
Confidence 33321 11111222 3444344332 223344443 11 34588887 7899999999
Q ss_pred EecCcccccchhhHHHHHHHhcceEEeccCCCCCCCHHHHHHHHHHHhCCcHHHHHHH
Q 042753 376 MLTWPMDADQYTNAQLLVDQLGVGIRVGEGTRNIPESDELARLLAQSVDGPRRERLKA 433 (473)
Q Consensus 376 ~l~~P~~~DQ~~na~rv~~~~G~G~~l~~~~~~~~~~~~l~~~i~~~l~~~~~~~~~a 433 (473)
+|.-|+..-|.+.++++.+. |.|+.++ +.+.|.++++.+++|+ ..+++.
T Consensus 345 vi~Gp~~~Nf~ei~~~l~~~-ga~~~v~-------~~~~l~~~v~~l~~~~-~~r~~~ 393 (419)
T COG1519 345 VIFGPYTFNFSDIAERLLQA-GAGLQVE-------DADLLAKAVELLLADE-DKREAY 393 (419)
T ss_pred EEeCCccccHHHHHHHHHhc-CCeEEEC-------CHHHHHHHHHHhcCCH-HHHHHH
Confidence 99999999999999999977 9999998 2888999999998886 444443
|
|
| >cd03819 GT1_WavL_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=98.81 E-value=1.7e-05 Score=77.34 Aligned_cols=300 Identities=15% Similarity=0.078 Sum_probs=153.7
Q ss_pred CCCChHHHHHHHHHHHhCCCeEEEEeCCCChh-hhhhhccCCCCCCeeEEEcCCCCCCCCCChhhHHHHHHHHHHHhhHH
Q 042753 15 TSGHIIPLLDLTNRLLTLGLNVTVLITQNNLP-LLDSLNANHPSTSLQSLVLPQPKWPAGSPATRLLKFMRVLRELHYPA 93 (473)
Q Consensus 15 ~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~-~i~~~~~~~~~~~~~f~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (473)
..|--.-...|+++|.++||+|++++...... .+.. .++++..++.... ..+. .. .....
T Consensus 9 ~gG~e~~~~~l~~~L~~~g~~v~v~~~~~~~~~~~~~-------~~~~~~~~~~~~~------~~~~-~~-----~~~~~ 69 (355)
T cd03819 9 SGGVERGTLELARALVERGHRSLVASAGGRLVAELEA-------EGSRHIKLPFISK------NPLR-IL-----LNVAR 69 (355)
T ss_pred cCcHHHHHHHHHHHHHHcCCEEEEEcCCCchHHHHHh-------cCCeEEEcccccc------chhh-hH-----HHHHH
Confidence 35666778999999999999999998754322 2222 2466655543210 0000 11 11234
Q ss_pred HHHHHhcCCCCCcEEEeCCCcc--hHHHHHHHhCCCcEEEecchHHHHHHHHhhhccCCCCCCCCCCCccccCCCCCCCC
Q 042753 94 LLDWFKSHPSPPVAILSDFFLG--WTQGLAAELGLPRVVFSPSGAFALSVSFAMWTDLPTNDDPDNVDALVSFPRVPNCP 171 (473)
Q Consensus 94 l~~~l~~~~~~pD~VV~D~~~~--~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~p~l~~~~ 171 (473)
+.+++++. +||+|++..... .+..+++..++|++..........
T Consensus 70 l~~~~~~~--~~dii~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~-------------------------------- 115 (355)
T cd03819 70 LRRLIREE--KVDIVHARSRAPAWSAYLAARRTRPPFVTTVHGFYSVN-------------------------------- 115 (355)
T ss_pred HHHHHHHc--CCCEEEECCCchhHHHHHHHHhcCCCEEEEeCCchhhH--------------------------------
Confidence 56677788 999999876433 344567788999887533211100
Q ss_pred CCCccccchhhhccCCCCCchHHHHHHhhhccCCcEEeecchHHhhHHHHHHHHHhh--CCCcEEEeccCCCCCCcchhh
Q 042753 172 VYPWYQISHLYRTLKEGDPDWDLHRSNMMANKTSWGIVFNSFAELERVYIDHMKKEM--GHDRVWAVGPVLPPDDDLVES 249 (473)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~le~~~~~~~~~~~--~~~~~~~vGpl~~~~~~~~~~ 249 (473)
. .. .....+...++..+-...+ .+...+ +..++..++.-+... .
T Consensus 116 -~--------------------~~---~~~~~~~~~vi~~s~~~~~-----~~~~~~~~~~~k~~~i~ngi~~~-~---- 161 (355)
T cd03819 116 -F--------------------RY---NAIMARGDRVIAVSNFIAD-----HIRENYGVDPDRIRVIPRGVDLD-R---- 161 (355)
T ss_pred -H--------------------HH---HHHHHhcCEEEEeCHHHHH-----HHHHhcCCChhhEEEecCCcccc-c----
Confidence 0 00 0111234444444321111 111111 102455554322221 1
Q ss_pred ccCCCCCCCChhh---hHHHhcCCCCCcEEEEEeCCccc-CCHHHHHHHHHHHHhC--CCcEEEEEeCCCccCCcccCCC
Q 042753 250 MCRGGSSSVPAHD---VLTWLDSRRDESVVYVCFGSRYV-LTAKQIHELAAALEKT--DVDFVYCVREPDERHASQDCGV 323 (473)
Q Consensus 250 ~~~~~~~~~~~~~---~~~~l~~~~~~~~V~vs~Gs~~~-~~~~~~~~~~~al~~~--~~~~i~~~~~~~~~~~~~~~~~ 323 (473)
.... ...... +.+-+.. ..+..+++..|+... ...+.+.+.+..+.+. +.++ +.++... . .+.
T Consensus 162 ~~~~---~~~~~~~~~~~~~~~~-~~~~~~i~~~Gr~~~~Kg~~~li~~~~~l~~~~~~~~l-~ivG~~~----~--~~~ 230 (355)
T cd03819 162 FDPG---AVPPERILALAREWPL-PKGKPVILLPGRLTRWKGQEVFIEALARLKKDDPDVHL-LIVGDAQ----G--RRF 230 (355)
T ss_pred cCcc---ccchHHHHHHHHHcCC-CCCceEEEEeeccccccCHHHHHHHHHHHHhcCCCeEE-EEEECCc----c--cch
Confidence 0000 001111 1111111 245567777787653 3445555556656553 3333 3344321 0 011
Q ss_pred CchhhH---Hhhc-CCCeEeecCccH-HHhhhccCccceeec----cC-chhHHHHHhhCCeEecCcccccchhhHHHHH
Q 042753 324 LPDGFE---DRVA-GRGYVIRGWSQQ-VAILRHKAVGAFLTH----CG-WNSVLEGVSAGVVMLTWPMDADQYTNAQLLV 393 (473)
Q Consensus 324 lp~~~~---~~~~-~~nv~v~~~~pq-~~lL~~~~v~~~ItH----gG-~~s~~eal~~GvP~l~~P~~~DQ~~na~rv~ 393 (473)
+.+.+. ++.. .+++.+.+|.++ ..+|..+++ +|.= -| .++++||+++|+|+|+... ......+.
T Consensus 231 ~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~l~~ad~--~i~ps~~~e~~~~~l~EA~a~G~PvI~~~~----~~~~e~i~ 304 (355)
T cd03819 231 YYAELLELIKRLGLQDRVTFVGHCSDMPAAYALADI--VVSASTEPEAFGRTAVEAQAMGRPVIASDH----GGARETVR 304 (355)
T ss_pred HHHHHHHHHHHcCCcceEEEcCCcccHHHHHHhCCE--EEecCCCCCCCchHHHHHHhcCCCEEEcCC----CCcHHHHh
Confidence 111111 1112 356888888543 457888887 4432 23 4599999999999998643 23444554
Q ss_pred HHhcceEEeccCCCCCCCHHHHHHHHHHHhC
Q 042753 394 DQLGVGIRVGEGTRNIPESDELARLLAQSVD 424 (473)
Q Consensus 394 ~~~G~G~~l~~~~~~~~~~~~l~~~i~~~l~ 424 (473)
+. +.|..++ .-+.+++.++|..++.
T Consensus 305 ~~-~~g~~~~-----~~~~~~l~~~i~~~~~ 329 (355)
T cd03819 305 PG-ETGLLVP-----PGDAEALAQALDQILS 329 (355)
T ss_pred CC-CceEEeC-----CCCHHHHHHHHHHHHh
Confidence 22 4787776 3588999999976664
|
WavL in Vibrio cholerae has been shown to be involved in the biosynthesis of the lipopolysaccharide core. |
| >cd05844 GT1_like_7 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds | Back alignment and domain information |
|---|
Probab=98.80 E-value=5.8e-06 Score=81.20 Aligned_cols=81 Identities=20% Similarity=0.231 Sum_probs=60.9
Q ss_pred CCCeEeecCccHHH---hhhccCccceeec----------cCchhHHHHHhhCCeEecCcccccchhhHHHHHHHhcceE
Q 042753 334 GRGYVIRGWSQQVA---ILRHKAVGAFLTH----------CGWNSVLEGVSAGVVMLTWPMDADQYTNAQLLVDQLGVGI 400 (473)
Q Consensus 334 ~~nv~v~~~~pq~~---lL~~~~v~~~ItH----------gG~~s~~eal~~GvP~l~~P~~~DQ~~na~rv~~~~G~G~ 400 (473)
..++.+.+++|+.+ ++..+++ +|.- |-.+++.||+++|+|+|+-+.. .+...+.+. +.|.
T Consensus 244 ~~~v~~~g~~~~~~l~~~~~~ad~--~v~ps~~~~~~~~E~~~~~~~EA~a~G~PvI~s~~~----~~~e~i~~~-~~g~ 316 (367)
T cd05844 244 GGRVTFLGAQPHAEVRELMRRARI--FLQPSVTAPSGDAEGLPVVLLEAQASGVPVVATRHG----GIPEAVEDG-ETGL 316 (367)
T ss_pred CCeEEECCCCCHHHHHHHHHhCCE--EEECcccCCCCCccCCchHHHHHHHcCCCEEEeCCC----CchhheecC-CeeE
Confidence 35788889998754 5788887 5532 3357899999999999987654 355556534 6787
Q ss_pred EeccCCCCCCCHHHHHHHHHHHhCCc
Q 042753 401 RVGEGTRNIPESDELARLLAQSVDGP 426 (473)
Q Consensus 401 ~l~~~~~~~~~~~~l~~~i~~~l~~~ 426 (473)
.++ .-+.+++.++|.++++|+
T Consensus 317 ~~~-----~~d~~~l~~~i~~l~~~~ 337 (367)
T cd05844 317 LVP-----EGDVAALAAALGRLLADP 337 (367)
T ss_pred EEC-----CCCHHHHHHHHHHHHcCH
Confidence 776 347899999999999986
|
The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center |
| >PRK09922 UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D-galactosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=98.79 E-value=3.1e-06 Score=83.07 Aligned_cols=132 Identities=16% Similarity=0.196 Sum_probs=79.7
Q ss_pred CcEEEEEeCCcccCCHHHHHHHHHHHHhCCCcE-EEEEeCCCccCCcccCCCCchhhHHhh----cCCCeEeecCccH--
Q 042753 273 ESVVYVCFGSRYVLTAKQIHELAAALEKTDVDF-VYCVREPDERHASQDCGVLPDGFEDRV----AGRGYVIRGWSQQ-- 345 (473)
Q Consensus 273 ~~~V~vs~Gs~~~~~~~~~~~~~~al~~~~~~~-i~~~~~~~~~~~~~~~~~lp~~~~~~~----~~~nv~v~~~~pq-- 345 (473)
++.+++..|.........+..+++++.+....+ ++.++... .-+.+++.. .+.++...+|+++
T Consensus 179 ~~~~i~~~Grl~~~~~k~~~~l~~a~~~~~~~~~l~ivG~g~----------~~~~l~~~~~~~~l~~~v~f~G~~~~~~ 248 (359)
T PRK09922 179 KPAVFLYVGRLKFEGQKNVKELFDGLSQTTGEWQLHIIGDGS----------DFEKCKAYSRELGIEQRIIWHGWQSQPW 248 (359)
T ss_pred CCcEEEEEEEEecccCcCHHHHHHHHHhhCCCeEEEEEeCCc----------cHHHHHHHHHHcCCCCeEEEecccCCcH
Confidence 345667778764323344566777776643232 33444321 112222221 2457888888754
Q ss_pred HH---hhhccCccceeec----cCchhHHHHHhhCCeEecCc-ccccchhhHHHHHHHhcceEEeccCCCCCCCHHHHHH
Q 042753 346 VA---ILRHKAVGAFLTH----CGWNSVLEGVSAGVVMLTWP-MDADQYTNAQLLVDQLGVGIRVGEGTRNIPESDELAR 417 (473)
Q Consensus 346 ~~---lL~~~~v~~~ItH----gG~~s~~eal~~GvP~l~~P-~~~DQ~~na~rv~~~~G~G~~l~~~~~~~~~~~~l~~ 417 (473)
.. .+..+++ +|.. |-..++.||+++|+|+|+.- ..+ ....+. .-..|..++ .-+.+++.+
T Consensus 249 ~~~~~~~~~~d~--~v~~s~~Egf~~~~lEAma~G~Pvv~s~~~~g----~~eiv~-~~~~G~lv~-----~~d~~~la~ 316 (359)
T PRK09922 249 EVVQQKIKNVSA--LLLTSKFEGFPMTLLEAMSYGIPCISSDCMSG----PRDIIK-PGLNGELYT-----PGNIDEFVG 316 (359)
T ss_pred HHHHHHHhcCcE--EEECCcccCcChHHHHHHHcCCCEEEeCCCCC----hHHHcc-CCCceEEEC-----CCCHHHHHH
Confidence 22 3445665 5543 33679999999999999875 322 223444 314677776 358999999
Q ss_pred HHHHHhCCc
Q 042753 418 LLAQSVDGP 426 (473)
Q Consensus 418 ~i~~~l~~~ 426 (473)
+|.++++|+
T Consensus 317 ~i~~l~~~~ 325 (359)
T PRK09922 317 KLNKVISGE 325 (359)
T ss_pred HHHHHHhCc
Confidence 999999987
|
|
| >TIGR02472 sucr_P_syn_N sucrose-phosphate synthase, putative, glycosyltransferase domain | Back alignment and domain information |
|---|
Probab=98.79 E-value=2.4e-05 Score=78.97 Aligned_cols=111 Identities=12% Similarity=0.197 Sum_probs=70.2
Q ss_pred CCeEeecCccHHHh---hhcc----Cccceeecc---C-chhHHHHHhhCCeEecCcccccchhhHHHHHHHhcceEEec
Q 042753 335 RGYVIRGWSQQVAI---LRHK----AVGAFLTHC---G-WNSVLEGVSAGVVMLTWPMDADQYTNAQLLVDQLGVGIRVG 403 (473)
Q Consensus 335 ~nv~v~~~~pq~~l---L~~~----~v~~~ItHg---G-~~s~~eal~~GvP~l~~P~~~DQ~~na~rv~~~~G~G~~l~ 403 (473)
.++...+++++.++ +..+ ++ ||..+ | ..+++||+++|+|+|+.... .....+.+. ..|..++
T Consensus 317 ~~V~f~g~~~~~~~~~~~~~a~~~~Dv--~v~pS~~E~fg~~~lEAma~G~PvV~s~~g----g~~eiv~~~-~~G~lv~ 389 (439)
T TIGR02472 317 GKVAYPKHHRPDDVPELYRLAARSRGI--FVNPALTEPFGLTLLEAAACGLPIVATDDG----GPRDIIANC-RNGLLVD 389 (439)
T ss_pred ceEEecCCCCHHHHHHHHHHHhhcCCE--EecccccCCcccHHHHHHHhCCCEEEeCCC----CcHHHhcCC-CcEEEeC
Confidence 45777777777654 5544 55 76543 3 45999999999999987543 344445422 4687776
Q ss_pred cCCCCCCCHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHH
Q 042753 404 EGTRNIPESDELARLLAQSVDGPRRERLKARELSGAALSAVVKGGSSDRDLNDFIKRI 461 (473)
Q Consensus 404 ~~~~~~~~~~~l~~~i~~~l~~~~~~~~~a~~~~~~~~~~~~~~gs~~~~~~~~~~~~ 461 (473)
.-+.+++.++|.++++|+ ..+ +++++..++.+...-|-+..++++++.+
T Consensus 390 -----~~d~~~la~~i~~ll~~~-~~~---~~~~~~a~~~~~~~fsw~~~~~~~~~l~ 438 (439)
T TIGR02472 390 -----VLDLEAIASALEDALSDS-SQW---QLWSRNGIEGVRRHYSWDAHVEKYLRIL 438 (439)
T ss_pred -----CCCHHHHHHHHHHHHhCH-HHH---HHHHHHHHHHHHHhCCHHHHHHHHHHHh
Confidence 347899999999999986 433 3333333332233445555666655543
|
This family consists of the N-terminal regions, or in some cases the entirety, of bacterial proteins closely related to plant sucrose-phosphate synthases (SPS). The C-terminal domain (TIGR02471), found with most members of this family, resembles both bona fide plant sucrose-phosphate phosphatases (SPP) and the SPP-like domain of plant SPS. At least two members of this family lack the SPP-like domain, which may have binding or regulatory rather than enzymatic activity by analogy to plant SPS. This enzyme produces sucrose 6-phosphate and UDP from UDP-glucose and D-fructose 6-phosphate, and may be encoded near the gene for fructokinase. |
| >cd03811 GT1_WabH_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=98.71 E-value=9.9e-06 Score=78.20 Aligned_cols=135 Identities=17% Similarity=0.167 Sum_probs=77.1
Q ss_pred CCcEEEEEeCCccc-CCHHHHHHHHHHHHhC--CCcEEEEEeCCCccCCcccCCCCchhhHHhhc-CCCeEeecCccH-H
Q 042753 272 DESVVYVCFGSRYV-LTAKQIHELAAALEKT--DVDFVYCVREPDERHASQDCGVLPDGFEDRVA-GRGYVIRGWSQQ-V 346 (473)
Q Consensus 272 ~~~~V~vs~Gs~~~-~~~~~~~~~~~al~~~--~~~~i~~~~~~~~~~~~~~~~~lp~~~~~~~~-~~nv~v~~~~pq-~ 346 (473)
.++.+++..|+... ...+.+-..+..+.+. +.++++. +... ..+.+- ...++.. ..++...++.++ .
T Consensus 187 ~~~~~i~~~g~~~~~k~~~~~i~~~~~l~~~~~~~~l~i~-G~~~------~~~~~~-~~~~~~~~~~~v~~~g~~~~~~ 258 (353)
T cd03811 187 PDGPVILAVGRLSPQKGFDTLIRAFALLRKEGPDARLVIL-GDGP------LREELE-ALAKELGLADRVHFLGFQSNPY 258 (353)
T ss_pred CCceEEEEEecchhhcChHHHHHHHHHhhhcCCCceEEEE-cCCc------cHHHHH-HHHHhcCCCccEEEecccCCHH
Confidence 45678888888753 2223333333333332 3444443 3321 001011 1111222 356777788765 4
Q ss_pred HhhhccCccceeec----cCchhHHHHHhhCCeEecCcccccchhhHHHHHHHhcceEEeccCCCCCCCHHHH---HHHH
Q 042753 347 AILRHKAVGAFLTH----CGWNSVLEGVSAGVVMLTWPMDADQYTNAQLLVDQLGVGIRVGEGTRNIPESDEL---ARLL 419 (473)
Q Consensus 347 ~lL~~~~v~~~ItH----gG~~s~~eal~~GvP~l~~P~~~DQ~~na~rv~~~~G~G~~l~~~~~~~~~~~~l---~~~i 419 (473)
+++..+++ +|.- |..+++.||+++|+|+|+.... .....+.+. +.|...+ .-+.+.+ .+++
T Consensus 259 ~~~~~~d~--~i~ps~~e~~~~~~~Ea~~~G~PvI~~~~~----~~~e~i~~~-~~g~~~~-----~~~~~~~~~~~~~i 326 (353)
T cd03811 259 PYLKAADL--FVLSSRYEGFPNVLLEAMALGTPVVATDCP----GPREILEDG-ENGLLVP-----VGDEAALAAAALAL 326 (353)
T ss_pred HHHHhCCE--EEeCcccCCCCcHHHHHHHhCCCEEEcCCC----ChHHHhcCC-CceEEEC-----CCCHHHHHHHHHHH
Confidence 58888887 5532 3456899999999999986443 555666644 6788776 3466666 5666
Q ss_pred HHHhCCc
Q 042753 420 AQSVDGP 426 (473)
Q Consensus 420 ~~~l~~~ 426 (473)
..++.++
T Consensus 327 ~~~~~~~ 333 (353)
T cd03811 327 LDLLLDP 333 (353)
T ss_pred HhccCCh
Confidence 6666665
|
WabH in Klebsiella pneumoniae has been shown to transfer a GlcNAc residue from UDP-GlcNAc onto the acceptor GalUA residue in the cellular outer core. |
| >cd04951 GT1_WbdM_like This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli | Back alignment and domain information |
|---|
Probab=98.71 E-value=1.4e-05 Score=78.13 Aligned_cols=110 Identities=15% Similarity=0.122 Sum_probs=69.0
Q ss_pred CCCeEeecCccH-HHhhhccCccceeecc----CchhHHHHHhhCCeEecCcccccchhhHHHHHHHhcceEEeccCCCC
Q 042753 334 GRGYVIRGWSQQ-VAILRHKAVGAFLTHC----GWNSVLEGVSAGVVMLTWPMDADQYTNAQLLVDQLGVGIRVGEGTRN 408 (473)
Q Consensus 334 ~~nv~v~~~~pq-~~lL~~~~v~~~ItHg----G~~s~~eal~~GvP~l~~P~~~DQ~~na~rv~~~~G~G~~l~~~~~~ 408 (473)
.+++...++..+ .+++..+++ +|.-. ..+++.||+++|+|+|+. |...+...+.+ .|..+.
T Consensus 244 ~~~v~~~g~~~~~~~~~~~ad~--~v~~s~~e~~~~~~~Ea~a~G~PvI~~----~~~~~~e~i~~---~g~~~~----- 309 (360)
T cd04951 244 SNRVKLLGLRDDIAAYYNAADL--FVLSSAWEGFGLVVAEAMACELPVVAT----DAGGVREVVGD---SGLIVP----- 309 (360)
T ss_pred CCcEEEecccccHHHHHHhhce--EEecccccCCChHHHHHHHcCCCEEEe----cCCChhhEecC---CceEeC-----
Confidence 356777777654 568888887 55433 257899999999999974 44555555552 344444
Q ss_pred CCCHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHH
Q 042753 409 IPESDELARLLAQSVDGPRRERLKARELSGAALSAVVKGGSSDRDLNDFIKRI 461 (473)
Q Consensus 409 ~~~~~~l~~~i~~~l~~~~~~~~~a~~~~~~~~~~~~~~gs~~~~~~~~~~~~ 461 (473)
.-+.+++.++|.+++++++.+++...+-++.+ .+.-+-+..++++.+..
T Consensus 310 ~~~~~~~~~~i~~ll~~~~~~~~~~~~~~~~~----~~~~s~~~~~~~~~~~y 358 (360)
T cd04951 310 ISDPEALANKIDEILKMSGEERDIIGARRERI----VKKFSINSIVQQWLTLY 358 (360)
T ss_pred CCCHHHHHHHHHHHHhCCHHHHHHHHHHHHHH----HHhcCHHHHHHHHHHHh
Confidence 34788999999999954325554443333333 23344555555555543
|
In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have |
| >PRK01021 lpxB lipid-A-disaccharide synthase; Reviewed | Back alignment and domain information |
|---|
Probab=98.65 E-value=4.8e-05 Score=77.03 Aligned_cols=195 Identities=16% Similarity=0.138 Sum_probs=104.1
Q ss_pred CcEEEec-cCCCCCCcchhhccCCCCCCCChhhhHHHhcCCCCCcEEEEEeCCcccCCHHHHHHHHHHHH--h--CCCcE
Q 042753 231 DRVWAVG-PVLPPDDDLVESMCRGGSSSVPAHDVLTWLDSRRDESVVYVCFGSRYVLTAKQIHELAAALE--K--TDVDF 305 (473)
Q Consensus 231 ~~~~~vG-pl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~V~vs~Gs~~~~~~~~~~~~~~al~--~--~~~~~ 305 (473)
-++.||| |+...- + .....++..+.++-.+++++|-+--||-.+--...+..++++.+ . .+.++
T Consensus 381 v~v~yVGHPL~d~i-~----------~~~~~~~~r~~lgl~~~~~iIaLLPGSR~~EI~rllPv~l~aa~~~~l~~~l~f 449 (608)
T PRK01021 381 LRTVYLGHPLVETI-S----------SFSPNLSWKEQLHLPSDKPIVAAFPGSRRGDILRNLTIQVQAFLASSLASTHQL 449 (608)
T ss_pred CCeEEECCcHHhhc-c----------cCCCHHHHHHHcCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHhccCeEE
Confidence 5899999 777764 2 01233344444444347789999999986544444555666665 3 24455
Q ss_pred EEEEeCCCccCCcccCCCCchhhHHhhcCCC---eEeecCccHHHhhhccCccceeeccCchhHHHHHhhCCeEecC-cc
Q 042753 306 VYCVREPDERHASQDCGVLPDGFEDRVAGRG---YVIRGWSQQVAILRHKAVGAFLTHCGWNSVLEGVSAGVVMLTW-PM 381 (473)
Q Consensus 306 i~~~~~~~~~~~~~~~~~lp~~~~~~~~~~n---v~v~~~~pq~~lL~~~~v~~~ItHgG~~s~~eal~~GvP~l~~-P~ 381 (473)
++..... ...+.+.+.....+ +.+..--...++++.+++ .+.-+|. .++|+...|+||+++ -.
T Consensus 450 vvp~a~~----------~~~~~i~~~~~~~~~~~~~ii~~~~~~~~m~aaD~--aLaaSGT-aTLEaAL~g~PmVV~YK~ 516 (608)
T PRK01021 450 LVSSANP----------KYDHLILEVLQQEGCLHSHIVPSQFRYELMRECDC--ALAKCGT-IVLETALNQTPTIVTCQL 516 (608)
T ss_pred EEecCch----------hhHHHHHHHHhhcCCCCeEEecCcchHHHHHhcCe--eeecCCH-HHHHHHHhCCCEEEEEec
Confidence 5433221 11122222221111 122110012578999997 5665654 578999999999884 33
Q ss_pred cccchhhHHHHHHH----hc-----ceEEecc---CCCCCCCHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHhcCCC
Q 042753 382 DADQYTNAQLLVDQ----LG-----VGIRVGE---GTRNIPESDELARLLAQSVDGPRRERLKARELSGAALSAVVKGGS 449 (473)
Q Consensus 382 ~~DQ~~na~rv~~~----~G-----~G~~l~~---~~~~~~~~~~l~~~i~~~l~~~~~~~~~a~~~~~~~~~~~~~~gs 449 (473)
..=-+..++++.+. .| +|..+-+ ..+++.|++.|.+++ ++|.|+ ..+++.++=-+.+++...+|.+
T Consensus 517 s~Lty~Iak~Lvki~i~yIsLpNIIagr~VvPEllqgQ~~~tpe~La~~l-~lL~d~-~~r~~~~~~l~~lr~~Lg~~~~ 594 (608)
T PRK01021 517 RPFDTFLAKYIFKIILPAYSLPNIILGSTIFPEFIGGKKDFQPEEVAAAL-DILKTS-QSKEKQKDACRDLYQAMNESAS 594 (608)
T ss_pred CHHHHHHHHHHHhccCCeeehhHHhcCCCcchhhcCCcccCCHHHHHHHH-HHhcCH-HHHHHHHHHHHHHHHHhcCCCC
Confidence 33334556666630 00 1211110 002578999999997 888876 4444444333333333244444
Q ss_pred hH
Q 042753 450 SD 451 (473)
Q Consensus 450 ~~ 451 (473)
+-
T Consensus 595 ~~ 596 (608)
T PRK01021 595 TM 596 (608)
T ss_pred CH
Confidence 33
|
|
| >PF02350 Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; InterPro: IPR003331 UDP-N-acetylglucosamine 2-epimerase 5 | Back alignment and domain information |
|---|
Probab=98.65 E-value=4e-07 Score=88.13 Aligned_cols=259 Identities=14% Similarity=0.097 Sum_probs=131.5
Q ss_pred HhhHHHHHHHhcCCCCCcEEEe--CCCcc-hHHHHHHHhCCCcEEEecchHHHHHHHHhhhccCCCCCCCCCCCccccCC
Q 042753 89 LHYPALLDWFKSHPSPPVAILS--DFFLG-WTQGLAAELGLPRVVFSPSGAFALSVSFAMWTDLPTNDDPDNVDALVSFP 165 (473)
Q Consensus 89 ~~~~~l~~~l~~~~~~pD~VV~--D~~~~-~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~p 165 (473)
.....+.+++++. +||+||+ |.... .++.+|..++||++-+....-.. +..
T Consensus 54 ~~~~~~~~~~~~~--~Pd~Vlv~GD~~~~la~alaA~~~~ipv~HieaGlRs~---------------d~~--------- 107 (346)
T PF02350_consen 54 LAIIELADVLERE--KPDAVLVLGDRNEALAAALAAFYLNIPVAHIEAGLRSG---------------DRT--------- 107 (346)
T ss_dssp HHHHHHHHHHHHH--T-SEEEEETTSHHHHHHHHHHHHTT-EEEEES-----S----------------TT---------
T ss_pred HHHHHHHHHHHhc--CCCEEEEEcCCchHHHHHHHHHHhCCCEEEecCCCCcc---------------ccC---------
Confidence 4456778888888 9999985 55544 56789999999988764331100 000
Q ss_pred CCCCCCCCCccccchhhhccCCCCCchHHHHHHhhhccCCcEEeecchHHhhHHHHHHHHHhhCCCcEEEeccCCCCCCc
Q 042753 166 RVPNCPVYPWYQISHLYRTLKEGDPDWDLHRSNMMANKTSWGIVFNSFAELERVYIDHMKKEMGHDRVWAVGPVLPPDDD 245 (473)
Q Consensus 166 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~le~~~~~~~~~~~~~~~~~~vGpl~~~~~~ 245 (473)
........++....+..-+ +..+-...+ .+ .+.-.+..+++.+|...-+. -
T Consensus 108 ----------------------~g~~de~~R~~i~~la~lh--f~~t~~~~~--~L--~~~G~~~~rI~~vG~~~~D~-l 158 (346)
T PF02350_consen 108 ----------------------EGMPDEINRHAIDKLAHLH--FAPTEEARE--RL--LQEGEPPERIFVVGNPGIDA-L 158 (346)
T ss_dssp ----------------------SSTTHHHHHHHHHHH-SEE--EESSHHHHH--HH--HHTT--GGGEEE---HHHHH-H
T ss_pred ----------------------CCCchhhhhhhhhhhhhhh--ccCCHHHHH--HH--HhcCCCCCeEEEEChHHHHH-H
Confidence 0012233333333333322 222321111 11 11111115889999543332 1
Q ss_pred chhhccCCCCCCCChhhh--HHHhcCCCCCcEEEEEeCCcccCC----HHHHHHHHHHHHhC-CCcEEEEEeCCCccCCc
Q 042753 246 LVESMCRGGSSSVPAHDV--LTWLDSRRDESVVYVCFGSRYVLT----AKQIHELAAALEKT-DVDFVYCVREPDERHAS 318 (473)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~--~~~l~~~~~~~~V~vs~Gs~~~~~----~~~~~~~~~al~~~-~~~~i~~~~~~~~~~~~ 318 (473)
...+ ....+.. ...+.. ..++.|+|++=...... ...+..++++|.+. +.++||.+....
T Consensus 159 ~~~~-------~~~~~~~~~~~i~~~-~~~~~iLvt~H~~t~~~~~~~~~~i~~~l~~L~~~~~~~vi~~~hn~p----- 225 (346)
T PF02350_consen 159 LQNK-------EEIEEKYKNSGILQD-APKPYILVTLHPVTNEDNPERLEQILEALKALAERQNVPVIFPLHNNP----- 225 (346)
T ss_dssp HHHH-------HTTCC-HHHHHHHHC-TTSEEEEEE-S-CCCCTHH--HHHHHHHHHHHHHHTTEEEEEE--S-H-----
T ss_pred HHhH-------HHHhhhhhhHHHHhc-cCCCEEEEEeCcchhcCChHHHHHHHHHHHHHHhcCCCcEEEEecCCc-----
Confidence 0000 0011112 122222 57899999995555444 34556677777665 788999998542
Q ss_pred ccCCCCchhhHHhhcC-CCeEeecCccH---HHhhhccCccceeeccCchhHH-HHHhhCCeEecCcccccchhhHHHHH
Q 042753 319 QDCGVLPDGFEDRVAG-RGYVIRGWSQQ---VAILRHKAVGAFLTHCGWNSVL-EGVSAGVVMLTWPMDADQYTNAQLLV 393 (473)
Q Consensus 319 ~~~~~lp~~~~~~~~~-~nv~v~~~~pq---~~lL~~~~v~~~ItHgG~~s~~-eal~~GvP~l~~P~~~DQ~~na~rv~ 393 (473)
.....+.++... +|+++.+-+++ ..+|.++++ +||.+| ++. ||.++|+|+|.+ .|+-..=.-+.
T Consensus 226 ----~~~~~i~~~l~~~~~v~~~~~l~~~~~l~ll~~a~~--vvgdSs--GI~eEa~~lg~P~v~i---R~~geRqe~r~ 294 (346)
T PF02350_consen 226 ----RGSDIIIEKLKKYDNVRLIEPLGYEEYLSLLKNADL--VVGDSS--GIQEEAPSLGKPVVNI---RDSGERQEGRE 294 (346)
T ss_dssp ----HHHHHHHHHHTT-TTEEEE----HHHHHHHHHHESE--EEESSH--HHHHHGGGGT--EEEC---SSS-S-HHHHH
T ss_pred ----hHHHHHHHHhcccCCEEEECCCCHHHHHHHHhcceE--EEEcCc--cHHHHHHHhCCeEEEe---cCCCCCHHHHh
Confidence 111222222221 48887777654 568889997 999999 555 999999999999 33333333333
Q ss_pred HHhcceEEeccCCCCCCCHHHHHHHHHHHhCCcHHHHHHHHH
Q 042753 394 DQLGVGIRVGEGTRNIPESDELARLLAQSVDGPRRERLKARE 435 (473)
Q Consensus 394 ~~~G~G~~l~~~~~~~~~~~~l~~~i~~~l~~~~~~~~~a~~ 435 (473)
. |..+.+. .+.++|.+++++++++. .+.++.+.
T Consensus 295 -~-~~nvlv~------~~~~~I~~ai~~~l~~~-~~~~~~~~ 327 (346)
T PF02350_consen 295 -R-GSNVLVG------TDPEAIIQAIEKALSDK-DFYRKLKN 327 (346)
T ss_dssp -T-TSEEEET------SSHHHHHHHHHHHHH-H-HHHHHHHC
T ss_pred -h-cceEEeC------CCHHHHHHHHHHHHhCh-HHHHhhcc
Confidence 4 6665543 67999999999999874 45444433
|
1.3.14 from EC catalyses the production of UDP-ManNAc from UDP-GlcNAc. Some of the enzymes is this family are bifunctional. In microorganisms the epimerase is involved in in the synthesis of the capsule precursor UDP-ManNAcA [, ]. The protein from rat liver displays both epimerase and kinase activity [].; GO: 0008761 UDP-N-acetylglucosamine 2-epimerase activity, 0006047 UDP-N-acetylglucosamine metabolic process, 0009103 lipopolysaccharide biosynthetic process; PDB: 1V4V_B 3BEO_B 3DZC_B 3OT5_B 1O6C_B 1VGV_D 1F6D_C. |
| >TIGR03568 NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing | Back alignment and domain information |
|---|
Probab=98.64 E-value=4.3e-06 Score=81.83 Aligned_cols=320 Identities=15% Similarity=0.149 Sum_probs=164.1
Q ss_pred cEEEEEcCCCCCChHHHHHHHHHHHhC-CCeEEEEeCCCChh-h----hhhhccCCCCCCeeEEEcCCCCCCCCCChhhH
Q 042753 6 AHILVYPFPTSGHIIPLLDLTNRLLTL-GLNVTVLITQNNLP-L----LDSLNANHPSTSLQSLVLPQPKWPAGSPATRL 79 (473)
Q Consensus 6 ~~Il~~~~~~~GH~~p~l~La~~L~~r-Gh~Vt~~~~~~~~~-~----i~~~~~~~~~~~~~f~~l~~~~~~~~~~~~~~ 79 (473)
+||+++ .+++-.+.=+.++.++|.+. +.++.++.+..... . ...... .++... +... -.+... .-
T Consensus 1 ~ki~~v-~GtRpe~iklapv~~~l~~~~~~~~~lv~tGqH~~~~~g~~~~~~~~----~~~~~~--~~~~-~~~~~~-~~ 71 (365)
T TIGR03568 1 KKICVV-TGTRADYGLLRPLLKALQDDPDLELQLIVTGMHLSPEYGNTVNEIEK----DGFDID--EKIE-ILLDSD-SN 71 (365)
T ss_pred CeEEEE-EecChhHHHHHHHHHHHhcCCCCcEEEEEeCCCCChhhccHHHHHHH----cCCCCC--Cccc-cccCCC-CC
Confidence 355544 45777777888888999885 78888888764422 1 221110 122211 1000 001100 00
Q ss_pred HHHHHHHHHHhhHHHHHHHhcCCCCCcEEEeCC--Ccc-hHHHHHHHhCCCcEEEecchHHHHHHHHhhhccCCCCCCCC
Q 042753 80 LKFMRVLRELHYPALLDWFKSHPSPPVAILSDF--FLG-WTQGLAAELGLPRVVFSPSGAFALSVSFAMWTDLPTNDDPD 156 (473)
Q Consensus 80 ~~~~~~~~~~~~~~l~~~l~~~~~~pD~VV~D~--~~~-~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~p~~~~~~ 156 (473)
......+. .....+.+++++. +||+||+-. ... .+..+|..+|||++.+.-....
T Consensus 72 ~~~~~~~~-~~~~~~~~~~~~~--~Pd~vlv~GD~~~~la~alaA~~~~IPv~HveaG~rs------------------- 129 (365)
T TIGR03568 72 AGMAKSMG-LTIIGFSDAFERL--KPDLVVVLGDRFEMLAAAIAAALLNIPIAHIHGGEVT------------------- 129 (365)
T ss_pred CCHHHHHH-HHHHHHHHHHHHh--CCCEEEEeCCchHHHHHHHHHHHhCCcEEEEECCccC-------------------
Confidence 11122222 3346778889999 999999644 333 6689999999999976443210
Q ss_pred CCCccccCCCCCCCCCCCccccchhhhccCCCCCchHHHHHHhhhccCCcEEeecchHHhhHHHHHHH-HHhhCCCcEEE
Q 042753 157 NVDALVSFPRVPNCPVYPWYQISHLYRTLKEGDPDWDLHRSNMMANKTSWGIVFNSFAELERVYIDHM-KKEMGHDRVWA 235 (473)
Q Consensus 157 ~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~le~~~~~~~-~~~~~~~~~~~ 235 (473)
.+ . ..+..++....+.... +..+ +. .-+.+ +.-.+..+++.
T Consensus 130 -~~-------~-----------------------~eE~~r~~i~~la~l~--f~~t-~~----~~~~L~~eg~~~~~i~~ 171 (365)
T TIGR03568 130 -EG-------A-----------------------IDESIRHAITKLSHLH--FVAT-EE----YRQRVIQMGEDPDRVFN 171 (365)
T ss_pred -CC-------C-----------------------chHHHHHHHHHHHhhc--cCCC-HH----HHHHHHHcCCCCCcEEE
Confidence 00 0 0000000111110000 1111 00 11111 11111046777
Q ss_pred eccCCCCCCcchhhccCCCCCCCChhhhHHHhcCCCCCcEEEEEeCCcc---cCCHHHHHHHHHHHHhCCCcEEEEEeCC
Q 042753 236 VGPVLPPDDDLVESMCRGGSSSVPAHDVLTWLDSRRDESVVYVCFGSRY---VLTAKQIHELAAALEKTDVDFVYCVREP 312 (473)
Q Consensus 236 vGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~V~vs~Gs~~---~~~~~~~~~~~~al~~~~~~~i~~~~~~ 312 (473)
+|-...+. - .... ....+++.+.+.-..+++.|+|++=... ....+.+..+++++.+.+.+++++.+..
T Consensus 172 tG~~~iD~-l----~~~~---~~~~~~~~~~lgl~~~~~~vlvt~Hp~~~~~~~~~~~l~~li~~L~~~~~~~~vi~P~~ 243 (365)
T TIGR03568 172 VGSPGLDN-I----LSLD---LLSKEELEEKLGIDLDKPYALVTFHPVTLEKESAEEQIKELLKALDELNKNYIFTYPNA 243 (365)
T ss_pred ECCcHHHH-H----Hhhh---ccCHHHHHHHhCCCCCCCEEEEEeCCCcccccCchHHHHHHHHHHHHhccCCEEEEeCC
Confidence 88433332 0 0000 1122344444432224578888885543 2456789999999988776666665443
Q ss_pred CccCCcccCCCCchhhHHhhc-CCCeEeecCcc---HHHhhhccCccceeeccCchhHHHHHhhCCeEecCcccccchhh
Q 042753 313 DERHASQDCGVLPDGFEDRVA-GRGYVIRGWSQ---QVAILRHKAVGAFLTHCGWNSVLEGVSAGVVMLTWPMDADQYTN 388 (473)
Q Consensus 313 ~~~~~~~~~~~lp~~~~~~~~-~~nv~v~~~~p---q~~lL~~~~v~~~ItHgG~~s~~eal~~GvP~l~~P~~~DQ~~n 388 (473)
. .....+-+.+.+... .+|+.+.+-++ ...++.++++ +||.++.+- .||.+.|+|+|.+- .-|
T Consensus 244 ~-----p~~~~i~~~i~~~~~~~~~v~l~~~l~~~~~l~Ll~~a~~--vitdSSggi-~EA~~lg~Pvv~l~--~R~--- 310 (365)
T TIGR03568 244 D-----AGSRIINEAIEEYVNEHPNFRLFKSLGQERYLSLLKNADA--VIGNSSSGI-IEAPSFGVPTINIG--TRQ--- 310 (365)
T ss_pred C-----CCchHHHHHHHHHhcCCCCEEEECCCChHHHHHHHHhCCE--EEEcChhHH-HhhhhcCCCEEeec--CCc---
Confidence 1 000011112222111 35777776554 4668889997 999886655 99999999999874 111
Q ss_pred HHHHHHHhcceEE-eccCCCCCCCHHHHHHHHHHHhC
Q 042753 389 AQLLVDQLGVGIR-VGEGTRNIPESDELARLLAQSVD 424 (473)
Q Consensus 389 a~rv~~~~G~G~~-l~~~~~~~~~~~~l~~~i~~~l~ 424 (473)
.-++ . |..+. + ..+.++|.++++++++
T Consensus 311 -e~~~-~-g~nvl~v------g~~~~~I~~a~~~~~~ 338 (365)
T TIGR03568 311 -KGRL-R-ADSVIDV------DPDKEEIVKAIEKLLD 338 (365)
T ss_pred -hhhh-h-cCeEEEe------CCCHHHHHHHHHHHhC
Confidence 1111 2 43322 3 3568999999999654
|
This family of enzymes catalyzes the combined epimerization and UDP-hydrolysis of UDP-N-acetylglucosamine to N-acetylmannosamine. This is in contrast to the related enzyme WecB (TIGR00236) which retains the UDP moiety. NeuC acts in concert with NeuA and NeuB to synthesize CMP-N5-acetyl-neuraminate. |
| >PF02684 LpxB: Lipid-A-disaccharide synthetase; InterPro: IPR003835 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=98.64 E-value=1e-05 Score=78.30 Aligned_cols=191 Identities=21% Similarity=0.178 Sum_probs=108.8
Q ss_pred CcEEEec-cCCCCCCcchhhccCCCCCCCChhhhHHHhcCCCCCcEEEEEeCCcccCCHHHHHHHHHHHH---h--CCCc
Q 042753 231 DRVWAVG-PVLPPDDDLVESMCRGGSSSVPAHDVLTWLDSRRDESVVYVCFGSRYVLTAKQIHELAAALE---K--TDVD 304 (473)
Q Consensus 231 ~~~~~vG-pl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~V~vs~Gs~~~~~~~~~~~~~~al~---~--~~~~ 304 (473)
-++.||| |+...- . . ........+.+ -..++++|.+--||-.+--...+..++++.+ + .+.+
T Consensus 153 ~~~~~VGHPl~d~~-~---------~-~~~~~~~~~~~-l~~~~~iIaLLPGSR~~EI~rllP~~l~aa~~l~~~~p~l~ 220 (373)
T PF02684_consen 153 VPVTYVGHPLLDEV-K---------P-EPDRAEAREKL-LDPDKPIIALLPGSRKSEIKRLLPIFLEAAKLLKKQRPDLQ 220 (373)
T ss_pred CCeEEECCcchhhh-c---------c-CCCHHHHHHhc-CCCCCcEEEEeCCCCHHHHHHHHHHHHHHHHHHHHhCCCeE
Confidence 4799999 887765 2 0 11223333333 2247899999999985433333444555543 2 3456
Q ss_pred EEEEEeCCCccCCcccCCCCchhhHHhh--cCCCeEe-ecCccHHHhhhccCccceeeccCchhHHHHHhhCCeEecC-c
Q 042753 305 FVYCVREPDERHASQDCGVLPDGFEDRV--AGRGYVI-RGWSQQVAILRHKAVGAFLTHCGWNSVLEGVSAGVVMLTW-P 380 (473)
Q Consensus 305 ~i~~~~~~~~~~~~~~~~~lp~~~~~~~--~~~nv~v-~~~~pq~~lL~~~~v~~~ItHgG~~s~~eal~~GvP~l~~-P 380 (473)
+++...... ..+.+.... ...++.+ .-.-.-.++|..+++ .+.-+| ..++|+..+|+|||++ -
T Consensus 221 fvvp~a~~~----------~~~~i~~~~~~~~~~~~~~~~~~~~~~~m~~ad~--al~~SG-TaTLE~Al~g~P~Vv~Yk 287 (373)
T PF02684_consen 221 FVVPVAPEV----------HEELIEEILAEYPPDVSIVIIEGESYDAMAAADA--ALAASG-TATLEAALLGVPMVVAYK 287 (373)
T ss_pred EEEecCCHH----------HHHHHHHHHHhhCCCCeEEEcCCchHHHHHhCcc--hhhcCC-HHHHHHHHhCCCEEEEEc
Confidence 665544321 111111111 1122222 122245668888887 444444 4689999999999875 3
Q ss_pred ccccchhhHHHHHHHhc------------ceEEeccCCCCCCCHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHhcCC
Q 042753 381 MDADQYTNAQLLVDQLG------------VGIRVGEGTRNIPESDELARLLAQSVDGPRRERLKARELSGAALSAVVKGG 448 (473)
Q Consensus 381 ~~~DQ~~na~rv~~~~G------------~G~~l~~~~~~~~~~~~l~~~i~~~l~~~~~~~~~a~~~~~~~~~~~~~~g 448 (473)
...=.+..|+++. +.. +-..+- +++.|++.|.+++.++++|. ..++..+...+.+++....|.
T Consensus 288 ~~~lt~~iak~lv-k~~~isL~Niia~~~v~PEli---Q~~~~~~~i~~~~~~ll~~~-~~~~~~~~~~~~~~~~~~~~~ 362 (373)
T PF02684_consen 288 VSPLTYFIAKRLV-KVKYISLPNIIAGREVVPELI---QEDATPENIAAELLELLENP-EKRKKQKELFREIRQLLGPGA 362 (373)
T ss_pred CcHHHHHHHHHhh-cCCEeechhhhcCCCcchhhh---cccCCHHHHHHHHHHHhcCH-HHHHHHHHHHHHHHHhhhhcc
Confidence 3334445555554 212 222233 67899999999999999997 666666666666665545554
Q ss_pred ChH
Q 042753 449 SSD 451 (473)
Q Consensus 449 s~~ 451 (473)
++.
T Consensus 363 ~~~ 365 (373)
T PF02684_consen 363 SSR 365 (373)
T ss_pred CCH
Confidence 433
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. These enzymes belong to the glycosyltransferase family 19 GT19 from CAZY. Lipid-A-disaccharide synthetase 2.4.1.182 from EC is involved with acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase 2.3.1.129 from EC and tetraacyldisaccharide 4'-kinase 2.7.1.130 from EC in the biosynthesis of the phosphorylated glycolipid, lipid A, in the outer membrane of Escherichia coli and other bacteria. These enzymes catalyse the first disaccharide step in the synthesis of lipid-A-disaccharide.; GO: 0008915 lipid-A-disaccharide synthase activity, 0009245 lipid A biosynthetic process |
| >cd03802 GT1_AviGT4_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=98.64 E-value=3.8e-05 Score=74.29 Aligned_cols=153 Identities=16% Similarity=0.121 Sum_probs=89.2
Q ss_pred EEEEEeCCcccCCHHHHHHHHHHHHhCCCcEEEEEeCCCccCCcccCCCCchhhHHhh--cCCCeEeecCccHHH---hh
Q 042753 275 VVYVCFGSRYVLTAKQIHELAAALEKTDVDFVYCVREPDERHASQDCGVLPDGFEDRV--AGRGYVIRGWSQQVA---IL 349 (473)
Q Consensus 275 ~V~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~lp~~~~~~~--~~~nv~v~~~~pq~~---lL 349 (473)
.+.+..|.... .+....+++++++.+.++++.-.... .+.+ ....... ..+++...+++++.+ ++
T Consensus 172 ~~i~~~Gr~~~--~Kg~~~li~~~~~~~~~l~i~G~~~~-------~~~~-~~~~~~~~~~~~~v~~~G~~~~~~~~~~~ 241 (335)
T cd03802 172 DYLLFLGRISP--EKGPHLAIRAARRAGIPLKLAGPVSD-------PDYF-YREIAPELLDGPDIEYLGEVGGAEKAELL 241 (335)
T ss_pred CEEEEEEeecc--ccCHHHHHHHHHhcCCeEEEEeCCCC-------HHHH-HHHHHHhcccCCcEEEeCCCCHHHHHHHH
Confidence 34555677732 23345577778777777665433321 0111 1111111 246888999998754 67
Q ss_pred hccCccceee--ccC-chhHHHHHhhCCeEecCcccccchhhHHHHHHHhc-ceEEeccCCCCCCCHHHHHHHHHHHhCC
Q 042753 350 RHKAVGAFLT--HCG-WNSVLEGVSAGVVMLTWPMDADQYTNAQLLVDQLG-VGIRVGEGTRNIPESDELARLLAQSVDG 425 (473)
Q Consensus 350 ~~~~v~~~It--HgG-~~s~~eal~~GvP~l~~P~~~DQ~~na~rv~~~~G-~G~~l~~~~~~~~~~~~l~~~i~~~l~~ 425 (473)
+.+++-++-+ +-| ..++.||+++|+|+|+.... .....+. . | .|...+ . .+++.++|.+++..
T Consensus 242 ~~~d~~v~ps~~~E~~~~~~lEAma~G~PvI~~~~~----~~~e~i~-~-~~~g~l~~---~----~~~l~~~l~~l~~~ 308 (335)
T cd03802 242 GNARALLFPILWEEPFGLVMIEAMACGTPVIAFRRG----AVPEVVE-D-GVTGFLVD---S----VEELAAAVARADRL 308 (335)
T ss_pred HhCcEEEeCCcccCCcchHHHHHHhcCCCEEEeCCC----Cchhhee-C-CCcEEEeC---C----HHHHHHHHHHHhcc
Confidence 8888722222 233 45899999999999987543 3334444 4 4 677666 2 89999999998765
Q ss_pred cHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHH
Q 042753 426 PRRERLKARELSGAALSAVVKGGSSDRDLNDFIKR 460 (473)
Q Consensus 426 ~~~~~~~a~~~~~~~~~~~~~~gs~~~~~~~~~~~ 460 (473)
. ++++++. . .+.-+.+..++++++.
T Consensus 309 ~---~~~~~~~---~----~~~~s~~~~~~~~~~~ 333 (335)
T cd03802 309 D---RAACRRR---A----ERRFSAARMVDDYLAL 333 (335)
T ss_pred H---HHHHHHH---H----HHhCCHHHHHHHHHHH
Confidence 3 2233322 1 2234566666666654
|
aviGT4 in Streptomyces viridochromogenes has been shown to be involved in biosynthesis of oligosaccharide antibiotic avilamycin A. Inactivation of aviGT4 resulted in a mutant that accumulated a novel avilamycin derivative lacking the terminal eurekanate residue. |
| >cd04955 GT1_like_6 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=98.64 E-value=1.9e-05 Score=77.34 Aligned_cols=157 Identities=20% Similarity=0.222 Sum_probs=85.4
Q ss_pred EEEEeCCcccCCHHHHHHHHHHHHhCC--CcEEEEEeCCCccCCcccCCCCchhhHHhh-cCCCeEeecCccHHH---hh
Q 042753 276 VYVCFGSRYVLTAKQIHELAAALEKTD--VDFVYCVREPDERHASQDCGVLPDGFEDRV-AGRGYVIRGWSQQVA---IL 349 (473)
Q Consensus 276 V~vs~Gs~~~~~~~~~~~~~~al~~~~--~~~i~~~~~~~~~~~~~~~~~lp~~~~~~~-~~~nv~v~~~~pq~~---lL 349 (473)
.++..|+... ...+..+++++++.. .++ +.++... ..+.+-+.+.++. ..++|.+.+++|+.+ ++
T Consensus 195 ~i~~~G~~~~--~Kg~~~li~a~~~l~~~~~l-~ivG~~~------~~~~~~~~~~~~~~~~~~V~~~g~~~~~~~~~~~ 265 (363)
T cd04955 195 YYLLVGRIVP--ENNIDDLIEAFSKSNSGKKL-VIVGNAD------HNTPYGKLLKEKAAADPRIIFVGPIYDQELLELL 265 (363)
T ss_pred EEEEEecccc--cCCHHHHHHHHHhhccCceE-EEEcCCC------CcchHHHHHHHHhCCCCcEEEccccChHHHHHHH
Confidence 3456788753 233445666666543 443 3444421 0011112222112 356888999999865 45
Q ss_pred hccCccceeeccCc-----hhHHHHHhhCCeEecCcccccchhhHHHHHHHhcceEEeccCCCCCCCHHHHHHHHHHHhC
Q 042753 350 RHKAVGAFLTHCGW-----NSVLEGVSAGVVMLTWPMDADQYTNAQLLVDQLGVGIRVGEGTRNIPESDELARLLAQSVD 424 (473)
Q Consensus 350 ~~~~v~~~ItHgG~-----~s~~eal~~GvP~l~~P~~~DQ~~na~rv~~~~G~G~~l~~~~~~~~~~~~l~~~i~~~l~ 424 (473)
..+++ ++.++-. +++.||+++|+|+|+...... ...+. ..|.... .. +.+.++|.++++
T Consensus 266 ~~ad~--~v~ps~~~e~~~~~~~EAma~G~PvI~s~~~~~----~e~~~---~~g~~~~---~~----~~l~~~i~~l~~ 329 (363)
T cd04955 266 RYAAL--FYLHGHSVGGTNPSLLEAMAYGCPVLASDNPFN----REVLG---DKAIYFK---VG----DDLASLLEELEA 329 (363)
T ss_pred HhCCE--EEeCCccCCCCChHHHHHHHcCCCEEEecCCcc----ceeec---CCeeEec---Cc----hHHHHHHHHHHh
Confidence 55676 5554433 479999999999998754422 22222 1244444 21 129999999999
Q ss_pred CcHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHH
Q 042753 425 GPRRERLKARELSGAALSAVVKGGSSDRDLNDFIKRI 461 (473)
Q Consensus 425 ~~~~~~~~a~~~~~~~~~~~~~~gs~~~~~~~~~~~~ 461 (473)
++ ...++ +++..++.....-|.+...+++++.+
T Consensus 330 ~~-~~~~~---~~~~~~~~~~~~fs~~~~~~~~~~~y 362 (363)
T cd04955 330 DP-EEVSA---MAKAARERIREKYTWEKIADQYEELY 362 (363)
T ss_pred CH-HHHHH---HHHHHHHHHHHhCCHHHHHHHHHHHh
Confidence 86 33322 23333322233455666667766543
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >COG0763 LpxB Lipid A disaccharide synthetase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=98.64 E-value=7.8e-06 Score=77.38 Aligned_cols=214 Identities=18% Similarity=0.141 Sum_probs=117.9
Q ss_pred HHhhHHHHHHHHHhhCCCcEEEec-cCCCCCCcchhhccCCCCCCCChhhhHHHhcCCCCCcEEEEEeCCcccCCHHHHH
Q 042753 214 AELERVYIDHMKKEMGHDRVWAVG-PVLPPDDDLVESMCRGGSSSVPAHDVLTWLDSRRDESVVYVCFGSRYVLTAKQIH 292 (473)
Q Consensus 214 ~~le~~~~~~~~~~~~~~~~~~vG-pl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~V~vs~Gs~~~~~~~~~~ 292 (473)
..+|+.+++. .+ -.+.||| |+...- ++ ...++.+.+-+.-..+++++.+--||-.+--...+.
T Consensus 144 lPFE~~~y~k----~g-~~~~yVGHpl~d~i-~~----------~~~r~~ar~~l~~~~~~~~lalLPGSR~sEI~rl~~ 207 (381)
T COG0763 144 LPFEPAFYDK----FG-LPCTYVGHPLADEI-PL----------LPDREAAREKLGIDADEKTLALLPGSRRSEIRRLLP 207 (381)
T ss_pred cCCCHHHHHh----cC-CCeEEeCChhhhhc-cc----------cccHHHHHHHhCCCCCCCeEEEecCCcHHHHHHHHH
Confidence 3456655542 22 2489999 676665 31 223455666665556889999999998653333333
Q ss_pred HHHHHHHh-----CCCcEEEEEeCCCccCCcccCCCCchhhHHhhcC-CCeEeecCccHHHhhhccCccceeeccCchhH
Q 042753 293 ELAAALEK-----TDVDFVYCVREPDERHASQDCGVLPDGFEDRVAG-RGYVIRGWSQQVAILRHKAVGAFLTHCGWNSV 366 (473)
Q Consensus 293 ~~~~al~~-----~~~~~i~~~~~~~~~~~~~~~~~lp~~~~~~~~~-~nv~v~~~~pq~~lL~~~~v~~~ItHgG~~s~ 366 (473)
.+.++.++ .+.+|+.-+.... .+.+-..+.++... .+.++.+- --.+.+..+++ .+.-+|. -+
T Consensus 208 ~f~~a~~~l~~~~~~~~~vlp~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~-~~~~a~~~aD~--al~aSGT-~t 276 (381)
T COG0763 208 PFVQAAQELKARYPDLKFVLPLVNAK-------YRRIIEEALKWEVAGLSLILIDG-EKRKAFAAADA--ALAASGT-AT 276 (381)
T ss_pred HHHHHHHHHHhhCCCceEEEecCcHH-------HHHHHHHHhhccccCceEEecCc-hHHHHHHHhhH--HHHhccH-HH
Confidence 34444332 3567776665432 01111111111110 11222111 11336777886 4555553 47
Q ss_pred HHHHhhCCeEecC-cccccchhhHHHHHHHhc------------ceEEeccCCCCCCCHHHHHHHHHHHhCCc---HHHH
Q 042753 367 LEGVSAGVVMLTW-PMDADQYTNAQLLVDQLG------------VGIRVGEGTRNIPESDELARLLAQSVDGP---RRER 430 (473)
Q Consensus 367 ~eal~~GvP~l~~-P~~~DQ~~na~rv~~~~G------------~G~~l~~~~~~~~~~~~l~~~i~~~l~~~---~~~~ 430 (473)
+|+..+|+|||+. =...=-+..+++.. +.. +...+- .+..+++.|.+++..++.|. ..++
T Consensus 277 LE~aL~g~P~Vv~Yk~~~it~~iak~lv-k~~yisLpNIi~~~~ivPEli---q~~~~pe~la~~l~~ll~~~~~~~~~~ 352 (381)
T COG0763 277 LEAALAGTPMVVAYKVKPITYFIAKRLV-KLPYVSLPNILAGREIVPELI---QEDCTPENLARALEELLLNGDRREALK 352 (381)
T ss_pred HHHHHhCCCEEEEEeccHHHHHHHHHhc-cCCcccchHHhcCCccchHHH---hhhcCHHHHHHHHHHHhcChHhHHHHH
Confidence 8999999999875 11111222333333 111 222222 46789999999999999986 3444
Q ss_pred HHHHHHHHHHHHHHhcCCChHHHHHHHHHHHH
Q 042753 431 LKARELSGAALSAVVKGGSSDRDLNDFIKRIN 462 (473)
Q Consensus 431 ~~a~~~~~~~~~~~~~~gs~~~~~~~~~~~~~ 462 (473)
+...++.+.+ +.+++++.+++.+++.+.
T Consensus 353 ~~~~~l~~~l----~~~~~~e~aA~~vl~~~~ 380 (381)
T COG0763 353 EKFRELHQYL----REDPASEIAAQAVLELLL 380 (381)
T ss_pred HHHHHHHHHH----cCCcHHHHHHHHHHHHhc
Confidence 4455555554 455678888888877654
|
|
| >TIGR02149 glgA_Coryne glycogen synthase, Corynebacterium family | Back alignment and domain information |
|---|
Probab=98.62 E-value=7.9e-05 Score=73.85 Aligned_cols=168 Identities=18% Similarity=0.180 Sum_probs=93.5
Q ss_pred CcEEEEEeCCcccCCHHHHHHHHHHHHhC--CCcEEEEEeCCCccCCcccCCCCchhhHHhhc-----CCCeE-eecCcc
Q 042753 273 ESVVYVCFGSRYVLTAKQIHELAAALEKT--DVDFVYCVREPDERHASQDCGVLPDGFEDRVA-----GRGYV-IRGWSQ 344 (473)
Q Consensus 273 ~~~V~vs~Gs~~~~~~~~~~~~~~al~~~--~~~~i~~~~~~~~~~~~~~~~~lp~~~~~~~~-----~~nv~-v~~~~p 344 (473)
...+++..|.... .+-+..+++++++. +.++++..+... . ..+-+.+.+... ..+++ +..+++
T Consensus 200 ~~~~i~~~Grl~~--~Kg~~~li~a~~~l~~~~~l~i~g~g~~----~---~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 270 (388)
T TIGR02149 200 SRPYILFVGRITR--QKGVPHLLDAVHYIPKDVQVVLCAGAPD----T---PEVAEEVRQAVALLDRNRTGIIWINKMLP 270 (388)
T ss_pred CceEEEEEccccc--ccCHHHHHHHHHHHhhcCcEEEEeCCCC----c---HHHHHHHHHHHHHhccccCceEEecCCCC
Confidence 4456667787753 23345566666553 456555544431 0 111122222111 12344 346777
Q ss_pred HH---HhhhccCccceeec----cCchhHHHHHhhCCeEecCcccccchhhHHHHHHHhcceEEeccCCCCCCC----HH
Q 042753 345 QV---AILRHKAVGAFLTH----CGWNSVLEGVSAGVVMLTWPMDADQYTNAQLLVDQLGVGIRVGEGTRNIPE----SD 413 (473)
Q Consensus 345 q~---~lL~~~~v~~~ItH----gG~~s~~eal~~GvP~l~~P~~~DQ~~na~rv~~~~G~G~~l~~~~~~~~~----~~ 413 (473)
+. +++..+++ +|.= |...+++||+++|+|+|+... ......+... +.|..++ ..+.+ .+
T Consensus 271 ~~~~~~~~~~aDv--~v~ps~~e~~g~~~lEA~a~G~PvI~s~~----~~~~e~i~~~-~~G~~~~---~~~~~~~~~~~ 340 (388)
T TIGR02149 271 KEELVELLSNAEV--FVCPSIYEPLGIVNLEAMACGTPVVASAT----GGIPEVVVDG-ETGFLVP---PDNSDADGFQA 340 (388)
T ss_pred HHHHHHHHHhCCE--EEeCCccCCCChHHHHHHHcCCCEEEeCC----CCHHHHhhCC-CceEEcC---CCCCcccchHH
Confidence 54 46788887 5542 334578999999999998654 3455556533 5788887 33222 27
Q ss_pred HHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHh
Q 042753 414 ELARLLAQSVDGPRRERLKARELSGAALSAVVKGGSSDRDLNDFIKRINE 463 (473)
Q Consensus 414 ~l~~~i~~~l~~~~~~~~~a~~~~~~~~~~~~~~gs~~~~~~~~~~~~~~ 463 (473)
++.++|.++++|+ ..+++. ++..++.+...-+.+..++++++.+++
T Consensus 341 ~l~~~i~~l~~~~-~~~~~~---~~~a~~~~~~~~s~~~~~~~~~~~y~~ 386 (388)
T TIGR02149 341 ELAKAINILLADP-ELAKKM---GIAGRKRAEEEFSWGSIAKKTVEMYRK 386 (388)
T ss_pred HHHHHHHHHHhCH-HHHHHH---HHHHHHHHHHhCCHHHHHHHHHHHHHh
Confidence 8999999999986 433222 222221112334566667777766654
|
This model describes Corynebacterium glutamicum GlgA and closely related proteins in several other species. This enzyme is required for glycogen biosynthesis and appears to replace the distantly related TIGR02095 family of ADP-glucose type glycogen synthase in Corynebacterium glutamicum, Mycobacterium tuberculosis, Bifidobacterium longum, and Streptomyces coelicolor. |
| >cd03812 GT1_CapH_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=98.58 E-value=3.2e-05 Score=75.59 Aligned_cols=137 Identities=14% Similarity=0.094 Sum_probs=81.3
Q ss_pred CCcEEEEEeCCccc-CCHHHHHHHHHHHHhC--CCcEEEEEeCCCccCCcccCCCCchhhHHh---h-cCCCeEeecCcc
Q 042753 272 DESVVYVCFGSRYV-LTAKQIHELAAALEKT--DVDFVYCVREPDERHASQDCGVLPDGFEDR---V-AGRGYVIRGWSQ 344 (473)
Q Consensus 272 ~~~~V~vs~Gs~~~-~~~~~~~~~~~al~~~--~~~~i~~~~~~~~~~~~~~~~~lp~~~~~~---~-~~~nv~v~~~~p 344 (473)
.++.+++..|+... ...+.+-..+..+.+. +.++++ ++... ..+.+.+. . ...++...++..
T Consensus 190 ~~~~~i~~vGr~~~~Kg~~~li~a~~~l~~~~~~~~l~i-vG~g~----------~~~~~~~~~~~~~~~~~v~~~g~~~ 258 (358)
T cd03812 190 EDKFVIGHVGRFSEQKNHEFLIEIFAELLKKNPNAKLLL-VGDGE----------LEEEIKKKVKELGLEDKVIFLGVRN 258 (358)
T ss_pred CCCEEEEEEeccccccChHHHHHHHHHHHHhCCCeEEEE-EeCCc----------hHHHHHHHHHhcCCCCcEEEecccC
Confidence 45677778888753 2334444445555433 333333 33321 11112111 1 235677777654
Q ss_pred H-HHhhhccCccceeec----cCchhHHHHHhhCCeEecCcccccchhhHHHHHHHhcceEEeccCCCCCCCHHHHHHHH
Q 042753 345 Q-VAILRHKAVGAFLTH----CGWNSVLEGVSAGVVMLTWPMDADQYTNAQLLVDQLGVGIRVGEGTRNIPESDELARLL 419 (473)
Q Consensus 345 q-~~lL~~~~v~~~ItH----gG~~s~~eal~~GvP~l~~P~~~DQ~~na~rv~~~~G~G~~l~~~~~~~~~~~~l~~~i 419 (473)
+ .+++..+++ +|.- |-..+++||+++|+|+|+....+ ....+. . +.|.... .-+.+++.++|
T Consensus 259 ~~~~~~~~adi--~v~ps~~E~~~~~~lEAma~G~PvI~s~~~~----~~~~i~-~-~~~~~~~-----~~~~~~~a~~i 325 (358)
T cd03812 259 DVPELLQAMDV--FLFPSLYEGLPLVLIEAQASGLPCILSDTIT----KEVDLT-D-LVKFLSL-----DESPEIWAEEI 325 (358)
T ss_pred CHHHHHHhcCE--EEecccccCCCHHHHHHHHhCCCEEEEcCCc----hhhhhc-c-CccEEeC-----CCCHHHHHHHH
Confidence 3 558888887 5543 44679999999999999865443 333444 4 5565554 23579999999
Q ss_pred HHHhCCcHHHHHHH
Q 042753 420 AQSVDGPRRERLKA 433 (473)
Q Consensus 420 ~~~l~~~~~~~~~a 433 (473)
.++++|+ ..+++.
T Consensus 326 ~~l~~~~-~~~~~~ 338 (358)
T cd03812 326 LKLKSED-RRERSS 338 (358)
T ss_pred HHHHhCc-chhhhh
Confidence 9999998 555443
|
capH in Staphylococcus aureus has been shown to be required for the biosynthesis of the type 1 capsular polysaccharide (CP1). |
| >TIGR03088 stp2 sugar transferase, PEP-CTERM/EpsH1 system associated | Back alignment and domain information |
|---|
Probab=98.55 E-value=0.00024 Score=70.11 Aligned_cols=113 Identities=18% Similarity=0.175 Sum_probs=72.0
Q ss_pred CCeEeecCcc-HHHhhhccCccceee--c--cCchhHHHHHhhCCeEecCcccccchhhHHHHHHHhcceEEeccCCCCC
Q 042753 335 RGYVIRGWSQ-QVAILRHKAVGAFLT--H--CGWNSVLEGVSAGVVMLTWPMDADQYTNAQLLVDQLGVGIRVGEGTRNI 409 (473)
Q Consensus 335 ~nv~v~~~~p-q~~lL~~~~v~~~It--H--gG~~s~~eal~~GvP~l~~P~~~DQ~~na~rv~~~~G~G~~l~~~~~~~ 409 (473)
.++.+.++.. -.+++..+++ +|. + |-..++.||+++|+|+|+.... .+...+.+. ..|..++ .
T Consensus 255 ~~v~~~g~~~~~~~~~~~adi--~v~pS~~Eg~~~~~lEAma~G~Pvv~s~~~----g~~e~i~~~-~~g~~~~-----~ 322 (374)
T TIGR03088 255 HLVWLPGERDDVPALMQALDL--FVLPSLAEGISNTILEAMASGLPVIATAVG----GNPELVQHG-VTGALVP-----P 322 (374)
T ss_pred ceEEEcCCcCCHHHHHHhcCE--EEeccccccCchHHHHHHHcCCCEEEcCCC----CcHHHhcCC-CceEEeC-----C
Confidence 3455545443 3568888997 552 2 4467999999999999996643 345555523 4677776 3
Q ss_pred CCHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHh
Q 042753 410 PESDELARLLAQSVDGPRRERLKARELSGAALSAVVKGGSSDRDLNDFIKRINE 463 (473)
Q Consensus 410 ~~~~~l~~~i~~~l~~~~~~~~~a~~~~~~~~~~~~~~gs~~~~~~~~~~~~~~ 463 (473)
-+.+++.++|.++++++ ..++ ++++..++.+...-+.+..++++++...+
T Consensus 323 ~d~~~la~~i~~l~~~~-~~~~---~~~~~a~~~~~~~fs~~~~~~~~~~~y~~ 372 (374)
T TIGR03088 323 GDAVALARALQPYVSDP-AARR---AHGAAGRARAEQQFSINAMVAAYAGLYDQ 372 (374)
T ss_pred CCHHHHHHHHHHHHhCH-HHHH---HHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 57889999999999886 4332 22233332223345567777777766554
|
Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate. |
| >cd03809 GT1_mtfB_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=98.54 E-value=4.2e-05 Score=74.64 Aligned_cols=89 Identities=16% Similarity=0.201 Sum_probs=60.2
Q ss_pred cCCCeEeecCccHHH---hhhccCccceeec----cCchhHHHHHhhCCeEecCcccccchhhHHHHHHHhcceEEeccC
Q 042753 333 AGRGYVIRGWSQQVA---ILRHKAVGAFLTH----CGWNSVLEGVSAGVVMLTWPMDADQYTNAQLLVDQLGVGIRVGEG 405 (473)
Q Consensus 333 ~~~nv~v~~~~pq~~---lL~~~~v~~~ItH----gG~~s~~eal~~GvP~l~~P~~~DQ~~na~rv~~~~G~G~~l~~~ 405 (473)
...++...+++|+.+ ++..+++ +|.- |..+++.||+++|+|+|+.... .....+. ..|..+.
T Consensus 251 ~~~~v~~~g~~~~~~~~~~~~~~d~--~l~ps~~e~~~~~~~Ea~a~G~pvI~~~~~----~~~e~~~---~~~~~~~-- 319 (365)
T cd03809 251 LGDRVRFLGYVSDEELAALYRGARA--FVFPSLYEGFGLPVLEAMACGTPVIASNIS----SLPEVAG---DAALYFD-- 319 (365)
T ss_pred CCCeEEECCCCChhHHHHHHhhhhh--hcccchhccCCCCHHHHhcCCCcEEecCCC----Cccceec---CceeeeC--
Confidence 356788889998764 6777886 4322 3456899999999999986542 2222222 2355555
Q ss_pred CCCCCCHHHHHHHHHHHhCCcHHHHHHHHHH
Q 042753 406 TRNIPESDELARLLAQSVDGPRRERLKAREL 436 (473)
Q Consensus 406 ~~~~~~~~~l~~~i~~~l~~~~~~~~~a~~~ 436 (473)
.-+.+++.++|.++++|+ ..+.+..+-
T Consensus 320 ---~~~~~~~~~~i~~l~~~~-~~~~~~~~~ 346 (365)
T cd03809 320 ---PLDPEALAAAIERLLEDP-ALREELRER 346 (365)
T ss_pred ---CCCHHHHHHHHHHHhcCH-HHHHHHHHH
Confidence 237899999999999987 555544433
|
mtfB (mannosyltransferase B) in E. coli has been shown to direct the growth of the O9-specific polysaccharide chain. It transfers two mannoses into the position 3 of the previously synthesized polysaccharide. |
| >cd03792 GT1_Trehalose_phosphorylase Trehalose phosphorylase (TP) reversibly catalyzes trehalose synthesis and degradation from alpha-glucose-1-phosphate (alpha-Glc-1-P) and glucose | Back alignment and domain information |
|---|
Probab=98.52 E-value=6.1e-05 Score=74.27 Aligned_cols=111 Identities=19% Similarity=0.151 Sum_probs=68.2
Q ss_pred CCeEeecCc--cH---HHhhhccCccceeecc----CchhHHHHHhhCCeEecCcccccchhhHHHHHHHhcceEEeccC
Q 042753 335 RGYVIRGWS--QQ---VAILRHKAVGAFLTHC----GWNSVLEGVSAGVVMLTWPMDADQYTNAQLLVDQLGVGIRVGEG 405 (473)
Q Consensus 335 ~nv~v~~~~--pq---~~lL~~~~v~~~ItHg----G~~s~~eal~~GvP~l~~P~~~DQ~~na~rv~~~~G~G~~l~~~ 405 (473)
.++.+..+. ++ .++++.+++ |+.-+ -..++.||+++|+|+|+.... .....+.+. +.|...+
T Consensus 252 ~~v~~~~~~~~~~~~~~~~~~~ad~--~v~~s~~Eg~g~~~lEA~a~G~Pvv~s~~~----~~~~~i~~~-~~g~~~~-- 322 (372)
T cd03792 252 PDIHVLTLPPVSDLEVNALQRASTV--VLQKSIREGFGLTVTEALWKGKPVIAGPVG----GIPLQIEDG-ETGFLVD-- 322 (372)
T ss_pred CCeEEEecCCCCHHHHHHHHHhCeE--EEeCCCccCCCHHHHHHHHcCCCEEEcCCC----CchhhcccC-CceEEeC--
Confidence 456666765 33 246788887 66433 245999999999999986543 233445423 4576554
Q ss_pred CCCCCCHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHh
Q 042753 406 TRNIPESDELARLLAQSVDGPRRERLKARELSGAALSAVVKGGSSDRDLNDFIKRINE 463 (473)
Q Consensus 406 ~~~~~~~~~l~~~i~~~l~~~~~~~~~a~~~~~~~~~~~~~~gs~~~~~~~~~~~~~~ 463 (473)
+.+.+..+|.++++++ +.++...+-+.. .+.+.-+-+..++++++.+.+
T Consensus 323 -----~~~~~a~~i~~ll~~~-~~~~~~~~~a~~---~~~~~~s~~~~~~~~~~~~~~ 371 (372)
T cd03792 323 -----TVEEAAVRILYLLRDP-ELRRKMGANARE---HVRENFLITRHLKDYLYLISK 371 (372)
T ss_pred -----CcHHHHHHHHHHHcCH-HHHHHHHHHHHH---HHHHHcCHHHHHHHHHHHHHh
Confidence 3567888999999886 544333222222 112335567777777776654
|
The catalyzing activity includes the phosphorolysis of trehalose, which produce alpha-Glc-1-P and glucose, and the subsequent synthesis of trehalose. This family is most closely related to the GT1 family of glycosyltransferases. |
| >TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant | Back alignment and domain information |
|---|
Probab=98.51 E-value=0.00075 Score=73.00 Aligned_cols=176 Identities=14% Similarity=0.157 Sum_probs=96.7
Q ss_pred hhHHHhcCCCCCcEEEEEeCCcccCCHHHHHHHHHHHHhCC-----CcEEEEEeCCCccCCcccCCCCc-------hhh-
Q 042753 262 DVLTWLDSRRDESVVYVCFGSRYVLTAKQIHELAAALEKTD-----VDFVYCVREPDERHASQDCGVLP-------DGF- 328 (473)
Q Consensus 262 ~~~~~l~~~~~~~~V~vs~Gs~~~~~~~~~~~~~~al~~~~-----~~~i~~~~~~~~~~~~~~~~~lp-------~~~- 328 (473)
.+..|+.. ++++ ++++.|.... .+-+..+++|+.... ..+.++++... +.+.+. ..+
T Consensus 469 ~l~r~~~~-pdkp-vIL~VGRL~p--~KGi~~LIeAf~~L~~l~~~~nL~LIiG~gd------d~d~l~~~~~~~l~~L~ 538 (1050)
T TIGR02468 469 EIMRFFTN-PRKP-MILALARPDP--KKNITTLVKAFGECRPLRELANLTLIMGNRD------DIDEMSSGSSSVLTSVL 538 (1050)
T ss_pred HHHhhccc-CCCc-EEEEEcCCcc--ccCHHHHHHHHHHhHhhccCCCEEEEEecCc------hhhhhhccchHHHHHHH
Confidence 45666654 3444 5566677653 333445666665431 24445555421 001110 111
Q ss_pred --HHhhc-CCCeEeecCccHHH---hhhcc----Cccceeec----cCchhHHHHHhhCCeEecCcccccchhhHHHHHH
Q 042753 329 --EDRVA-GRGYVIRGWSQQVA---ILRHK----AVGAFLTH----CGWNSVLEGVSAGVVMLTWPMDADQYTNAQLLVD 394 (473)
Q Consensus 329 --~~~~~-~~nv~v~~~~pq~~---lL~~~----~v~~~ItH----gG~~s~~eal~~GvP~l~~P~~~DQ~~na~rv~~ 394 (473)
.++.. ..+|...+++++.+ ++..+ ++ ||.- |=..+++||+++|+|+|+....+ ....+.
T Consensus 539 ~li~~lgL~g~V~FlG~v~~edvp~lYr~Ad~s~DV--FV~PS~~EgFGLvlLEAMAcGlPVVASdvGG----~~EII~- 611 (1050)
T TIGR02468 539 KLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGV--FINPAFIEPFGLTLIEAAAHGLPMVATKNGG----PVDIHR- 611 (1050)
T ss_pred HHHHHhCCCCeEEecCCCCHHHHHHHHHHhhhcCCe--eeCCcccCCCCHHHHHHHHhCCCEEEeCCCC----cHHHhc-
Confidence 12222 34577778888765 44444 34 6653 33468999999999999986432 333333
Q ss_pred HhcceEEeccCCCCCCCHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHhh
Q 042753 395 QLGVGIRVGEGTRNIPESDELARLLAQSVDGPRRERLKARELSGAALSAVVKGGSSDRDLNDFIKRINEL 464 (473)
Q Consensus 395 ~~G~G~~l~~~~~~~~~~~~l~~~i~~~l~~~~~~~~~a~~~~~~~~~~~~~~gs~~~~~~~~~~~~~~~ 464 (473)
.-.-|+.++ .-+.++|.++|.++++|+ ..+++..+-+.... . .-+-+..++++++.+...
T Consensus 612 ~g~nGlLVd-----P~D~eaLA~AL~~LL~Dp-elr~~m~~~gr~~v---~-~FSWe~ia~~yl~~i~~~ 671 (1050)
T TIGR02468 612 VLDNGLLVD-----PHDQQAIADALLKLVADK-QLWAECRQNGLKNI---H-LFSWPEHCKTYLSRIASC 671 (1050)
T ss_pred cCCcEEEEC-----CCCHHHHHHHHHHHhhCH-HHHHHHHHHHHHHH---H-HCCHHHHHHHHHHHHHHH
Confidence 313587776 357899999999999987 44433332222211 1 144556666666665543
|
Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein. |
| >COG0381 WecB UDP-N-acetylglucosamine 2-epimerase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=98.49 E-value=9e-06 Score=77.16 Aligned_cols=355 Identities=15% Similarity=0.130 Sum_probs=188.5
Q ss_pred ccEEEEEcCCCCCChHHHHHHHHHHHhCC-CeEEEEeCCCCh--hhhhhhccCCCCCCeeEEEcCCCCCCCCCChhhHHH
Q 042753 5 GAHILVYPFPTSGHIIPLLDLTNRLLTLG-LNVTVLITQNNL--PLLDSLNANHPSTSLQSLVLPQPKWPAGSPATRLLK 81 (473)
Q Consensus 5 ~~~Il~~~~~~~GH~~p~l~La~~L~~rG-h~Vt~~~~~~~~--~~i~~~~~~~~~~~~~f~~l~~~~~~~~~~~~~~~~ 81 (473)
|+||++ .++++=.+.=+.+|.+++.+.+ .+..++.+.... +.......- .++.. |....+...+.. .
T Consensus 3 ~~Kv~~-I~GTRPE~iKmapli~~~~~~~~~~~~vi~TGQH~d~em~~~~le~---~~i~~---pdy~L~i~~~~~---t 72 (383)
T COG0381 3 MLKVLT-IFGTRPEAIKMAPLVKALEKDPDFELIVIHTGQHRDYEMLDQVLEL---FGIRK---PDYDLNIMKPGQ---T 72 (383)
T ss_pred ceEEEE-EEecCHHHHHHhHHHHHHHhCCCCceEEEEecccccHHHHHHHHHH---hCCCC---CCcchhccccCC---C
Confidence 445544 4568888889999999999986 777777776555 444433110 01221 111111111112 2
Q ss_pred HHHHHHHHhhHHHHHHHhcCCCCCcEEEe--CCCcc-hHHHHHHHhCCCcEEEecchHHHHHHHHhhhccCCCCCCCCCC
Q 042753 82 FMRVLRELHYPALLDWFKSHPSPPVAILS--DFFLG-WTQGLAAELGLPRVVFSPSGAFALSVSFAMWTDLPTNDDPDNV 158 (473)
Q Consensus 82 ~~~~~~~~~~~~l~~~l~~~~~~pD~VV~--D~~~~-~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~p~~~~~~~~ 158 (473)
+.+.+. .....+.+++.+. +||+|++ |.... +++++|...+||+.-+-...-. .
T Consensus 73 l~~~t~-~~i~~~~~vl~~~--kPD~VlVhGDT~t~lA~alaa~~~~IpV~HvEAGlRt-------------------~- 129 (383)
T COG0381 73 LGEITG-NIIEGLSKVLEEE--KPDLVLVHGDTNTTLAGALAAFYLKIPVGHVEAGLRT-------------------G- 129 (383)
T ss_pred HHHHHH-HHHHHHHHHHHhh--CCCEEEEeCCcchHHHHHHHHHHhCCceEEEeccccc-------------------C-
Confidence 333334 5557788899999 9999985 55544 5578889999998876433210 0
Q ss_pred CccccCCCCCCCCCCCccccchhhhccCCCCCchHHHHHHhhhccCCcEEeecchHHhhHHHHHHHHHhhCCCcEEEecc
Q 042753 159 DALVSFPRVPNCPVYPWYQISHLYRTLKEGDPDWDLHRSNMMANKTSWGIVFNSFAELERVYIDHMKKEMGHDRVWAVGP 238 (473)
Q Consensus 159 ~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~le~~~~~~~~~~~~~~~~~~vGp 238 (473)
..+ +| .-++ ++....+... .+.+| +..... .++.-.+-.+++.+|-
T Consensus 130 --~~~---~P-----------EE~N------------R~l~~~~S~~--hfapt--e~ar~n--Ll~EG~~~~~IfvtGn 175 (383)
T COG0381 130 --DLY---FP-----------EEIN------------RRLTSHLSDL--HFAPT--EIARKN--LLREGVPEKRIFVTGN 175 (383)
T ss_pred --CCC---Cc-----------HHHH------------HHHHHHhhhh--hcCCh--HHHHHH--HHHcCCCccceEEeCC
Confidence 000 11 1000 0000000000 01111 111111 1122223035777883
Q ss_pred CCCCCCcchhhccCCCCCCCChhhhHHH-hcCCCCCcEEEEEeCCcccCCHHHHHHHHHHHH----hCCCcEEEEEeCCC
Q 042753 239 VLPPDDDLVESMCRGGSSSVPAHDVLTW-LDSRRDESVVYVCFGSRYVLTAKQIHELAAALE----KTDVDFVYCVREPD 313 (473)
Q Consensus 239 l~~~~~~~~~~~~~~~~~~~~~~~~~~~-l~~~~~~~~V~vs~Gs~~~~~~~~~~~~~~al~----~~~~~~i~~~~~~~ 313 (473)
...+... ....+ ...+...... ++. .++..|++|+=-..+.. +.++.+.+++. +. ..+.++++...
T Consensus 176 t~iDal~--~~~~~----~~~~~~~~~~~~~~-~~~~~iLvT~HRreN~~-~~~~~i~~al~~i~~~~-~~~~viyp~H~ 246 (383)
T COG0381 176 TVIDALL--NTRDR----VLEDSKILAKGLDD-KDKKYILVTAHRRENVG-EPLEEICEALREIAEEY-PDVIVIYPVHP 246 (383)
T ss_pred hHHHHHH--HHHhh----hccchhhHHhhhcc-ccCcEEEEEcchhhccc-ccHHHHHHHHHHHHHhC-CCceEEEeCCC
Confidence 3222100 00000 1111122211 222 46779999886655544 44555555543 34 23444444432
Q ss_pred ccCCcccCCCCchhhHHhhcC-CCeEee---cCccHHHhhhccCccceeeccCchhHHHHHhhCCeEecCcccccchhhH
Q 042753 314 ERHASQDCGVLPDGFEDRVAG-RGYVIR---GWSQQVAILRHKAVGAFLTHCGWNSVLEGVSAGVVMLTWPMDADQYTNA 389 (473)
Q Consensus 314 ~~~~~~~~~~lp~~~~~~~~~-~nv~v~---~~~pq~~lL~~~~v~~~ItHgG~~s~~eal~~GvP~l~~P~~~DQ~~na 389 (473)
. ..+-+-...+..+ +++.+. +|.+...++.++.+ ++|.+|. -.-||-..|+|++++-...++|.
T Consensus 247 -----~--~~v~e~~~~~L~~~~~v~li~pl~~~~f~~L~~~a~~--iltDSGg-iqEEAp~lg~Pvl~lR~~TERPE-- 314 (383)
T COG0381 247 -----R--PRVRELVLKRLKNVERVKLIDPLGYLDFHNLMKNAFL--ILTDSGG-IQEEAPSLGKPVLVLRDTTERPE-- 314 (383)
T ss_pred -----C--hhhhHHHHHHhCCCCcEEEeCCcchHHHHHHHHhceE--EEecCCc-hhhhHHhcCCcEEeeccCCCCcc--
Confidence 0 1111111233333 356654 45567778999986 8998874 46799999999999988888887
Q ss_pred HHHHHHhcceEEeccCCCCCCCHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHH
Q 042753 390 QLLVDQLGVGIRVGEGTRNIPESDELARLLAQSVDGPRRERLKARELSGAALSAVVKGGSSDRDLNDFIKRI 461 (473)
Q Consensus 390 ~rv~~~~G~G~~l~~~~~~~~~~~~l~~~i~~~l~~~~~~~~~a~~~~~~~~~~~~~~gs~~~~~~~~~~~~ 461 (473)
+++ . |.-+.+. .+.+.|.+++.++++++ ++.++.+....-. .+|.++++-++.+.++.
T Consensus 315 -~v~-a-gt~~lvg------~~~~~i~~~~~~ll~~~-~~~~~m~~~~npY----gdg~as~rIv~~l~~~~ 372 (383)
T COG0381 315 -GVE-A-GTNILVG------TDEENILDAATELLEDE-EFYERMSNAKNPY----GDGNASERIVEILLNYF 372 (383)
T ss_pred -cee-c-CceEEeC------ccHHHHHHHHHHHhhCh-HHHHHHhcccCCC----cCcchHHHHHHHHHHHh
Confidence 444 5 6555554 56799999999999997 7776665554443 33444454444444443
|
|
| >PRK15179 Vi polysaccharide biosynthesis protein TviE; Provisional | Back alignment and domain information |
|---|
Probab=98.41 E-value=0.0011 Score=69.73 Aligned_cols=111 Identities=18% Similarity=0.158 Sum_probs=71.1
Q ss_pred CCCeEeecCccH-HHhhhccCccceee---ccC-chhHHHHHhhCCeEecCcccccchhhHHHHHHHhcceEEeccCCCC
Q 042753 334 GRGYVIRGWSQQ-VAILRHKAVGAFLT---HCG-WNSVLEGVSAGVVMLTWPMDADQYTNAQLLVDQLGVGIRVGEGTRN 408 (473)
Q Consensus 334 ~~nv~v~~~~pq-~~lL~~~~v~~~It---HgG-~~s~~eal~~GvP~l~~P~~~DQ~~na~rv~~~~G~G~~l~~~~~~ 408 (473)
.++|.+.+|.++ ..+|..+++ ||. +.| -++++||+++|+|+|+.... .....|.+. ..|..++ ..
T Consensus 573 ~~~V~flG~~~dv~~ll~aaDv--~VlpS~~Egfp~vlLEAMA~G~PVVat~~g----G~~EiV~dg-~~GlLv~---~~ 642 (694)
T PRK15179 573 GERILFTGLSRRVGYWLTQFNA--FLLLSRFEGLPNVLIEAQFSGVPVVTTLAG----GAGEAVQEG-VTGLTLP---AD 642 (694)
T ss_pred CCcEEEcCCcchHHHHHHhcCE--EEeccccccchHHHHHHHHcCCeEEEECCC----ChHHHccCC-CCEEEeC---CC
Confidence 356888888875 447888887 554 444 56899999999999997643 344455522 3688887 56
Q ss_pred CCCHHHHHHHHHHHhCCc---HHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHH
Q 042753 409 IPESDELARLLAQSVDGP---RRERLKARELSGAALSAVVKGGSSDRDLNDFIKRI 461 (473)
Q Consensus 409 ~~~~~~l~~~i~~~l~~~---~~~~~~a~~~~~~~~~~~~~~gs~~~~~~~~~~~~ 461 (473)
+.+.+++.+++.+++.+. +.+++++++... ..-|.+..++++++..
T Consensus 643 d~~~~~La~aL~~ll~~l~~~~~l~~~ar~~a~-------~~FS~~~~~~~~~~lY 691 (694)
T PRK15179 643 TVTAPDVAEALARIHDMCAADPGIARKAADWAS-------ARFSLNQMIASTVRCY 691 (694)
T ss_pred CCChHHHHHHHHHHHhChhccHHHHHHHHHHHH-------HhCCHHHHHHHHHHHh
Confidence 666667777776665432 266666554432 2234555666665543
|
|
| >PRK15427 colanic acid biosynthesis glycosyltransferase WcaL; Provisional | Back alignment and domain information |
|---|
Probab=98.41 E-value=0.00037 Score=69.50 Aligned_cols=114 Identities=16% Similarity=0.142 Sum_probs=74.6
Q ss_pred CCCeEeecCccHHH---hhhccCccceeec---------cCc-hhHHHHHhhCCeEecCcccccchhhHHHHHHHhcceE
Q 042753 334 GRGYVIRGWSQQVA---ILRHKAVGAFLTH---------CGW-NSVLEGVSAGVVMLTWPMDADQYTNAQLLVDQLGVGI 400 (473)
Q Consensus 334 ~~nv~v~~~~pq~~---lL~~~~v~~~ItH---------gG~-~s~~eal~~GvP~l~~P~~~DQ~~na~rv~~~~G~G~ 400 (473)
.+++.+.+|+|+.+ ++..+++ ||.- -|. ++++||+++|+|+|+.... .....+.+. ..|.
T Consensus 278 ~~~V~~~G~~~~~el~~~l~~aDv--~v~pS~~~~~g~~Eg~p~~llEAma~G~PVI~t~~~----g~~E~v~~~-~~G~ 350 (406)
T PRK15427 278 EDVVEMPGFKPSHEVKAMLDDADV--FLLPSVTGADGDMEGIPVALMEAMAVGIPVVSTLHS----GIPELVEAD-KSGW 350 (406)
T ss_pred CCeEEEeCCCCHHHHHHHHHhCCE--EEECCccCCCCCccCccHHHHHHHhCCCCEEEeCCC----CchhhhcCC-CceE
Confidence 45788889999865 6777887 5542 244 5789999999999987543 344455422 4677
Q ss_pred EeccCCCCCCCHHHHHHHHHHHhC-CcHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHh
Q 042753 401 RVGEGTRNIPESDELARLLAQSVD-GPRRERLKARELSGAALSAVVKGGSSDRDLNDFIKRINE 463 (473)
Q Consensus 401 ~l~~~~~~~~~~~~l~~~i~~~l~-~~~~~~~~a~~~~~~~~~~~~~~gs~~~~~~~~~~~~~~ 463 (473)
.++ .-+.+++.++|.++++ |+ +.++ ++++..++.+...-+.+..++++.+.+.+
T Consensus 351 lv~-----~~d~~~la~ai~~l~~~d~-~~~~---~~~~~ar~~v~~~f~~~~~~~~l~~~~~~ 405 (406)
T PRK15427 351 LVP-----ENDAQALAQRLAAFSQLDT-DELA---PVVKRAREKVETDFNQQVINRELASLLQA 405 (406)
T ss_pred EeC-----CCCHHHHHHHHHHHHhCCH-HHHH---HHHHHHHHHHHHhcCHHHHHHHHHHHHhh
Confidence 776 3479999999999998 76 3322 22222222223334566777777776654
|
|
| >PLN02275 transferase, transferring glycosyl groups | Back alignment and domain information |
|---|
Probab=98.40 E-value=0.001 Score=65.49 Aligned_cols=75 Identities=20% Similarity=0.232 Sum_probs=52.0
Q ss_pred CCeEeec-CccHHHh---hhccCccceee-c-----cC-chhHHHHHhhCCeEecCcccccchhhHHHHHHHhcceEEec
Q 042753 335 RGYVIRG-WSQQVAI---LRHKAVGAFLT-H-----CG-WNSVLEGVSAGVVMLTWPMDADQYTNAQLLVDQLGVGIRVG 403 (473)
Q Consensus 335 ~nv~v~~-~~pq~~l---L~~~~v~~~It-H-----gG-~~s~~eal~~GvP~l~~P~~~DQ~~na~rv~~~~G~G~~l~ 403 (473)
+|++... |+|+.++ |+.+++ +|. + -| -++++||+++|+|+|+... ..+...+.+. +.|..++
T Consensus 286 ~~v~~~~~~~~~~~~~~~l~~aDv--~v~~~~s~~~e~~p~~llEAmA~G~PVVa~~~----gg~~eiv~~g-~~G~lv~ 358 (371)
T PLN02275 286 RHVAFRTMWLEAEDYPLLLGSADL--GVSLHTSSSGLDLPMKVVDMFGCGLPVCAVSY----SCIGELVKDG-KNGLLFS 358 (371)
T ss_pred CceEEEcCCCCHHHHHHHHHhCCE--EEEeccccccccccHHHHHHHHCCCCEEEecC----CChHHHccCC-CCeEEEC
Confidence 4555544 7887554 888998 553 2 12 3579999999999999743 2355556533 5787765
Q ss_pred cCCCCCCCHHHHHHHHHHHh
Q 042753 404 EGTRNIPESDELARLLAQSV 423 (473)
Q Consensus 404 ~~~~~~~~~~~l~~~i~~~l 423 (473)
+.+++.++|.++|
T Consensus 359 -------~~~~la~~i~~l~ 371 (371)
T PLN02275 359 -------SSSELADQLLELL 371 (371)
T ss_pred -------CHHHHHHHHHHhC
Confidence 3788999998875
|
|
| >TIGR03087 stp1 sugar transferase, PEP-CTERM/EpsH1 system associated | Back alignment and domain information |
|---|
Probab=98.38 E-value=0.0002 Score=71.24 Aligned_cols=111 Identities=24% Similarity=0.266 Sum_probs=71.1
Q ss_pred cCCCeEeecCccHH-HhhhccCcccee--ec--cCc-hhHHHHHhhCCeEecCcccccchhhHHHHHHHhcceEEeccCC
Q 042753 333 AGRGYVIRGWSQQV-AILRHKAVGAFL--TH--CGW-NSVLEGVSAGVVMLTWPMDADQYTNAQLLVDQLGVGIRVGEGT 406 (473)
Q Consensus 333 ~~~nv~v~~~~pq~-~lL~~~~v~~~I--tH--gG~-~s~~eal~~GvP~l~~P~~~DQ~~na~rv~~~~G~G~~l~~~~ 406 (473)
..+++.+.+++++. .++..+++ +| .+ .|. +.+.||+++|+|+|+.+...+.. .... |.|..+.
T Consensus 278 ~~~~V~~~G~v~~~~~~~~~adv--~v~Ps~~~eG~~~~~lEAma~G~PVV~t~~~~~~i-----~~~~-~~g~lv~--- 346 (397)
T TIGR03087 278 ALPGVTVTGSVADVRPYLAHAAV--AVAPLRIARGIQNKVLEAMAMAKPVVASPEAAEGI-----DALP-GAELLVA--- 346 (397)
T ss_pred cCCCeEEeeecCCHHHHHHhCCE--EEecccccCCcccHHHHHHHcCCCEEecCcccccc-----cccC-CcceEeC---
Confidence 35678888999863 47888887 55 22 354 36999999999999987543321 1113 5665553
Q ss_pred CCCCCHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHH
Q 042753 407 RNIPESDELARLLAQSVDGPRRERLKARELSGAALSAVVKGGSSDRDLNDFIKRI 461 (473)
Q Consensus 407 ~~~~~~~~l~~~i~~~l~~~~~~~~~a~~~~~~~~~~~~~~gs~~~~~~~~~~~~ 461 (473)
-+.+++.++|.++++|+ ..+++ +++..++.+...-+-+..++++.+.+
T Consensus 347 ---~~~~~la~ai~~ll~~~-~~~~~---~~~~ar~~v~~~fsw~~~~~~~~~~l 394 (397)
T TIGR03087 347 ---ADPADFAAAILALLANP-AEREE---LGQAARRRVLQHYHWPRNLARLDALL 394 (397)
T ss_pred ---CCHHHHHHHHHHHHcCH-HHHHH---HHHHHHHHHHHhCCHHHHHHHHHHHh
Confidence 46899999999999986 43322 22222222233355666666666554
|
Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate. |
| >TIGR02470 sucr_synth sucrose synthase | Back alignment and domain information |
|---|
Probab=98.36 E-value=0.0022 Score=67.88 Aligned_cols=127 Identities=14% Similarity=0.151 Sum_probs=72.0
Q ss_pred CCccEEEEEcCCC-------------CCChHHHHHHHHH--------HHhCCC----eEEEEeCCCCh-------hhhhh
Q 042753 3 PAGAHILVYPFPT-------------SGHIIPLLDLTNR--------LLTLGL----NVTVLITQNNL-------PLLDS 50 (473)
Q Consensus 3 ~~~~~Il~~~~~~-------------~GH~~p~l~La~~--------L~~rGh----~Vt~~~~~~~~-------~~i~~ 50 (473)
|-.+||++++..+ .|+..=.+.+|++ |+++|| +|+++|-.... +.++.
T Consensus 253 p~~~rIa~lS~Hg~~~~~~~lG~~DtGGq~vYV~elaraL~~~~~~~La~~G~~v~~~V~I~TR~~~~~~~~~~~~~~e~ 332 (784)
T TIGR02470 253 PMVFNVVILSPHGYFGQENVLGLPDTGGQVVYILDQVRALENEMLQRIKLQGLEITPKILIVTRLIPDAEGTTCNQRLEK 332 (784)
T ss_pred CccceEEEEecccccCCccccCCCCCCCceeHHHHHHHHHHHHHHHHHHhcCCCccceEEEEecCCCCcccccccccccc
Confidence 3458898777544 3555455667776 568899 77788864221 11122
Q ss_pred hccCCCCCCeeEEEcCCCCCCC--CCChhhHHHHHHHHHHHhhHHHHHHHhcCCCCCcEEEeCCCcc--hHHHHHHHhCC
Q 042753 51 LNANHPSTSLQSLVLPQPKWPA--GSPATRLLKFMRVLRELHYPALLDWFKSHPSPPVAILSDFFLG--WTQGLAAELGL 126 (473)
Q Consensus 51 ~~~~~~~~~~~f~~l~~~~~~~--~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~pD~VV~D~~~~--~~~~~A~~~gi 126 (473)
. ...++.+...+|+..... ++..-.-..++..+.+........+.++...+||+|++..... .+..+|+++||
T Consensus 333 ~---~~~~~~~I~rvp~g~~~~~~~~~~i~k~~l~p~l~~f~~~~~~~~~~~~~~~pDlIHahy~d~glva~lla~~lgV 409 (784)
T TIGR02470 333 V---YGTEHAWILRVPFRTENGIILRNWISRFEIWPYLETFAEDAEKEILAELQGKPDLIIGNYSDGNLVASLLARKLGV 409 (784)
T ss_pred c---cCCCceEEEEecCCCCcccccccccCHHHHHHHHHHHHHHHHHHHHHhcCCCCCEEEECCCchHHHHHHHHHhcCC
Confidence 1 112578888888654322 1211112234444452223333334434333799999976544 46789999999
Q ss_pred CcEEEe
Q 042753 127 PRVVFS 132 (473)
Q Consensus 127 P~v~~~ 132 (473)
|.+.+.
T Consensus 410 P~v~t~ 415 (784)
T TIGR02470 410 TQCTIA 415 (784)
T ss_pred CEEEEC
Confidence 977653
|
This model represents sucrose synthase, an enzyme that, despite its name, generally uses rather produces sucrose. Sucrose plus UDP (or ADP) becomes D-fructose plus UDP-glucose (or ADP-glucose), which is then available for cell wall (or starch) biosynthesis. The enzyme is homologous to sucrose phosphate synthase, which catalyzes the penultimate step in sucrose synthesis. Sucrose synthase is found, so far, exclusively in plants and cyanobacteria. |
| >PLN02846 digalactosyldiacylglycerol synthase | Back alignment and domain information |
|---|
Probab=98.36 E-value=0.00083 Score=67.14 Aligned_cols=74 Identities=12% Similarity=0.166 Sum_probs=52.0
Q ss_pred EeecCccHHHhhhccCccceeec----cCchhHHHHHhhCCeEecCcccccchhhHHHHHHHhcceEEeccCCCCCCCHH
Q 042753 338 VIRGWSQQVAILRHKAVGAFLTH----CGWNSVLEGVSAGVVMLTWPMDADQYTNAQLLVDQLGVGIRVGEGTRNIPESD 413 (473)
Q Consensus 338 ~v~~~~pq~~lL~~~~v~~~ItH----gG~~s~~eal~~GvP~l~~P~~~DQ~~na~rv~~~~G~G~~l~~~~~~~~~~~ 413 (473)
+...+.+..+++...++ ||.- +=.++++||+++|+|+|+.-..+ + ..+.+. +-|...+ +.+
T Consensus 287 vf~G~~~~~~~~~~~Dv--Fv~pS~~Et~g~v~lEAmA~G~PVVa~~~~~----~-~~v~~~-~ng~~~~-------~~~ 351 (462)
T PLN02846 287 VYPGRDHADPLFHDYKV--FLNPSTTDVVCTTTAEALAMGKIVVCANHPS----N-EFFKQF-PNCRTYD-------DGK 351 (462)
T ss_pred EECCCCCHHHHHHhCCE--EEECCCcccchHHHHHHHHcCCcEEEecCCC----c-ceeecC-CceEecC-------CHH
Confidence 34566667779999987 8776 34678999999999999986443 1 333312 3343332 588
Q ss_pred HHHHHHHHHhCCc
Q 042753 414 ELARLLAQSVDGP 426 (473)
Q Consensus 414 ~l~~~i~~~l~~~ 426 (473)
++.+++.++|+++
T Consensus 352 ~~a~ai~~~l~~~ 364 (462)
T PLN02846 352 GFVRATLKALAEE 364 (462)
T ss_pred HHHHHHHHHHccC
Confidence 9999999999865
|
|
| >KOG3349 consensus Predicted glycosyltransferase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.35 E-value=3.6e-06 Score=67.98 Aligned_cols=116 Identities=18% Similarity=0.197 Sum_probs=81.0
Q ss_pred CcEEEEEeCCcccCC---HHHHHHHHHHHHhCCC-cEEEEEeCCCccCCcccCCCCchhhHHhhcCCC--eEeecCccH-
Q 042753 273 ESVVYVCFGSRYVLT---AKQIHELAAALEKTDV-DFVYCVREPDERHASQDCGVLPDGFEDRVAGRG--YVIRGWSQQ- 345 (473)
Q Consensus 273 ~~~V~vs~Gs~~~~~---~~~~~~~~~al~~~~~-~~i~~~~~~~~~~~~~~~~~lp~~~~~~~~~~n--v~v~~~~pq- 345 (473)
...+||+-||..... .-.-.++.+.|.+.+. +.|..++.+. .-.++....-....+ +...+|-|-
T Consensus 3 ~~~vFVTVGtT~Fd~LI~~Vl~~~~~~~L~k~G~~kLiiQ~Grg~--------~~~~d~~~~~~k~~gl~id~y~f~psl 74 (170)
T KOG3349|consen 3 LMTVFVTVGTTSFDDLISCVLSEEFLQELQKRGFTKLIIQIGRGQ--------PFFGDPIDLIRKNGGLTIDGYDFSPSL 74 (170)
T ss_pred ceEEEEEeccccHHHHHHHHcCHHHHHHHHHcCccEEEEEecCCc--------cCCCCHHHhhcccCCeEEEEEecCccH
Confidence 457999999986311 1123457788888875 7788888762 113333322112233 344577775
Q ss_pred HHhhhccCccceeeccCchhHHHHHhhCCeEecCcc----cccchhhHHHHHHHhcce
Q 042753 346 VAILRHKAVGAFLTHCGWNSVLEGVSAGVVMLTWPM----DADQYTNAQLLVDQLGVG 399 (473)
Q Consensus 346 ~~lL~~~~v~~~ItHgG~~s~~eal~~GvP~l~~P~----~~DQ~~na~rv~~~~G~G 399 (473)
.+....+++ +|.|+|.||.+|.|..|+|.|+++. ...|-..|..+++. |.=
T Consensus 75 ~e~I~~Adl--VIsHAGaGS~letL~l~KPlivVvNd~LMDNHQ~ELA~qL~~e-gyL 129 (170)
T KOG3349|consen 75 TEDIRSADL--VISHAGAGSCLETLRLGKPLIVVVNDSLMDNHQLELAKQLAEE-GYL 129 (170)
T ss_pred HHHHhhccE--EEecCCcchHHHHHHcCCCEEEEeChHhhhhHHHHHHHHHHhc-CcE
Confidence 556666887 9999999999999999999999996 46899999999955 543
|
|
| >PLN00142 sucrose synthase | Back alignment and domain information |
|---|
Probab=98.12 E-value=0.0045 Score=65.61 Aligned_cols=108 Identities=14% Similarity=0.150 Sum_probs=60.3
Q ss_pred HHHHHHHhCCCeEE----EEeCCC--C-----hhhhhhhccCCCCCCeeEEEcCCCCCCC-CCChhhHHHHHHHHHHHhh
Q 042753 24 DLTNRLLTLGLNVT----VLITQN--N-----LPLLDSLNANHPSTSLQSLVLPQPKWPA-GSPATRLLKFMRVLRELHY 91 (473)
Q Consensus 24 ~La~~L~~rGh~Vt----~~~~~~--~-----~~~i~~~~~~~~~~~~~f~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~ 91 (473)
.++++|+++||+|+ ++|--. . .+.++.. ...++.+...+|+...++ ++..-.-..++..+.+...
T Consensus 319 el~~~l~~~G~~v~~~v~i~TR~i~~~~~~~~~~~~e~v---~~~~~~~I~rvP~g~~~~~l~~~i~ke~l~p~L~~f~~ 395 (815)
T PLN00142 319 EMLLRIKQQGLDIKPQILIVTRLIPDAKGTTCNQRLEKV---SGTEHSHILRVPFRTEKGILRKWISRFDVWPYLETFAE 395 (815)
T ss_pred HHHHHHHhcCCCccceeEEEEeccCCccCCcccCcceec---cCCCceEEEecCCCCCccccccccCHHHHHHHHHHHHH
Confidence 35678888999775 766421 1 1112222 112467787888654322 2211111234444442223
Q ss_pred HHHHHHHhcCCCCCcEEEeCCCcc--hHHHHHHHhCCCcEEEecc
Q 042753 92 PALLDWFKSHPSPPVAILSDFFLG--WTQGLAAELGLPRVVFSPS 134 (473)
Q Consensus 92 ~~l~~~l~~~~~~pD~VV~D~~~~--~~~~~A~~~giP~v~~~~~ 134 (473)
.....+.++...+||+|....... .+..+++++|||.+.+..+
T Consensus 396 ~~~~~~~~~~~~~PDlIHaHYwdsg~vA~~La~~lgVP~v~T~Hs 440 (815)
T PLN00142 396 DAASEILAELQGKPDLIIGNYSDGNLVASLLAHKLGVTQCTIAHA 440 (815)
T ss_pred HHHHHHHHhcCCCCCEEEECCccHHHHHHHHHHHhCCCEEEEccc
Confidence 333344344433799999986544 4669999999999986544
|
|
| >cd03804 GT1_wbaZ_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=98.10 E-value=0.001 Score=64.96 Aligned_cols=125 Identities=16% Similarity=0.188 Sum_probs=82.0
Q ss_pred EEEEeCCcccCCHHHHHHHHHHHHhCCCcEEEEEeCCCccCCcccCCCCchhhHHhhcCCCeEeecCccHH---Hhhhcc
Q 042753 276 VYVCFGSRYVLTAKQIHELAAALEKTDVDFVYCVREPDERHASQDCGVLPDGFEDRVAGRGYVIRGWSQQV---AILRHK 352 (473)
Q Consensus 276 V~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~v~~~~pq~---~lL~~~ 352 (473)
.++..|+... ......+++++++.+.+++++ +... -.+.+.+ ...+||.+.+++|+. .++..+
T Consensus 197 ~il~~G~~~~--~K~~~~li~a~~~~~~~l~iv-G~g~----------~~~~l~~-~~~~~V~~~g~~~~~~~~~~~~~a 262 (351)
T cd03804 197 YYLSVGRLVP--YKRIDLAIEAFNKLGKRLVVI-GDGP----------ELDRLRA-KAGPNVTFLGRVSDEELRDLYARA 262 (351)
T ss_pred EEEEEEcCcc--ccChHHHHHHHHHCCCcEEEE-ECCh----------hHHHHHh-hcCCCEEEecCCCHHHHHHHHHhC
Confidence 3556677653 334566788888777665544 4321 1122222 235789999999984 467888
Q ss_pred Cccceee--ccCc-hhHHHHHhhCCeEecCcccccchhhHHHHHHHhcceEEeccCCCCCCCHHHHHHHHHHHhCCc
Q 042753 353 AVGAFLT--HCGW-NSVLEGVSAGVVMLTWPMDADQYTNAQLLVDQLGVGIRVGEGTRNIPESDELARLLAQSVDGP 426 (473)
Q Consensus 353 ~v~~~It--HgG~-~s~~eal~~GvP~l~~P~~~DQ~~na~rv~~~~G~G~~l~~~~~~~~~~~~l~~~i~~~l~~~ 426 (473)
++ +|. .-|. .++.||+++|+|+|+....+ ....+.+. +.|..++ .-+.+++.++|.++++|+
T Consensus 263 d~--~v~ps~e~~g~~~~Eama~G~Pvi~~~~~~----~~e~i~~~-~~G~~~~-----~~~~~~la~~i~~l~~~~ 327 (351)
T cd03804 263 RA--FLFPAEEDFGIVPVEAMASGTPVIAYGKGG----ALETVIDG-VTGILFE-----EQTVESLAAAVERFEKNE 327 (351)
T ss_pred CE--EEECCcCCCCchHHHHHHcCCCEEEeCCCC----CcceeeCC-CCEEEeC-----CCCHHHHHHHHHHHHhCc
Confidence 87 442 3333 46789999999999976433 33344433 5788776 346888999999999885
|
wbaZ in Salmonella enterica has been shown to possess the mannosyl transferase activity. The members of this family are found in certain bacteria and Archaea. |
| >cd03791 GT1_Glycogen_synthase_DULL1_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=98.02 E-value=0.0068 Score=61.91 Aligned_cols=165 Identities=15% Similarity=0.148 Sum_probs=85.9
Q ss_pred CCcEEEEEeCCccc-CCHHHHHHHHHHHHhCCCcEEEEEeCCCccCCcccCCCCchhhHHhhc--CCCeEe-ecCccH--
Q 042753 272 DESVVYVCFGSRYV-LTAKQIHELAAALEKTDVDFVYCVREPDERHASQDCGVLPDGFEDRVA--GRGYVI-RGWSQQ-- 345 (473)
Q Consensus 272 ~~~~V~vs~Gs~~~-~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~lp~~~~~~~~--~~nv~v-~~~~pq-- 345 (473)
.+..+++..|.... ...+.+.+.+..+.+.+.++++. +... ..+.+.+.+... ..++++ ..+...
T Consensus 294 ~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~lvi~-G~g~--------~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 364 (476)
T cd03791 294 PDAPLFGFVGRLTEQKGIDLLLEALPELLELGGQLVIL-GSGD--------PEYEEALRELAARYPGRVAVLIGYDEALA 364 (476)
T ss_pred CCCCEEEEEeeccccccHHHHHHHHHHHHHcCcEEEEE-ecCC--------HHHHHHHHHHHHhCCCcEEEEEeCCHHHH
Confidence 34456777787753 23344444444444445554443 3321 112122322211 356654 344422
Q ss_pred HHhhhccCccceeec---cCc-hhHHHHHhhCCeEecCcccccchhhHHHHH------HHhcceEEeccCCCCCCCHHHH
Q 042753 346 VAILRHKAVGAFLTH---CGW-NSVLEGVSAGVVMLTWPMDADQYTNAQLLV------DQLGVGIRVGEGTRNIPESDEL 415 (473)
Q Consensus 346 ~~lL~~~~v~~~ItH---gG~-~s~~eal~~GvP~l~~P~~~DQ~~na~rv~------~~~G~G~~l~~~~~~~~~~~~l 415 (473)
..+++.+++ ++.- -|+ .+.+||+++|+|+|+....+ ....+. .. |.|..++ ..+.+++
T Consensus 365 ~~~~~~aDv--~l~pS~~E~~gl~~lEAma~G~pvI~~~~gg----~~e~v~~~~~~~~~-~~G~~~~-----~~~~~~l 432 (476)
T cd03791 365 HLIYAGADF--FLMPSRFEPCGLTQMYAMRYGTVPIVRATGG----LADTVIDYNEDTGE-GTGFVFE-----GYNADAL 432 (476)
T ss_pred HHHHHhCCE--EECCCCCCCCcHHHHHHhhCCCCCEECcCCC----ccceEeCCcCCCCC-CCeEEeC-----CCCHHHH
Confidence 246778887 5532 123 47899999999999765432 111222 12 4788877 3468999
Q ss_pred HHHHHHHhCCcHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHH
Q 042753 416 ARLLAQSVDGPRRERLKARELSGAALSAVVKGGSSDRDLNDFIKRI 461 (473)
Q Consensus 416 ~~~i~~~l~~~~~~~~~a~~~~~~~~~~~~~~gs~~~~~~~~~~~~ 461 (473)
.++|.++++.. .-++...++++... ...-+-+..++++++..
T Consensus 433 ~~~i~~~l~~~-~~~~~~~~~~~~~~---~~~fsw~~~a~~~~~~y 474 (476)
T cd03791 433 LAALRRALALY-RDPEAWRKLQRNAM---AQDFSWDRSAKEYLELY 474 (476)
T ss_pred HHHHHHHHHHH-cCHHHHHHHHHHHh---ccCCChHHHHHHHHHHH
Confidence 99999988532 11222233333332 23345566666666544
|
Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms. |
| >PRK00654 glgA glycogen synthase; Provisional | Back alignment and domain information |
|---|
Probab=98.01 E-value=0.013 Score=59.60 Aligned_cols=168 Identities=15% Similarity=0.156 Sum_probs=88.0
Q ss_pred CcEEEEEeCCccc-CCHHHHHHHHHHHHhCCCcEEEEEeCCCccCCcccCCCCchhhHHhhc--CCCeE-eecCccH--H
Q 042753 273 ESVVYVCFGSRYV-LTAKQIHELAAALEKTDVDFVYCVREPDERHASQDCGVLPDGFEDRVA--GRGYV-IRGWSQQ--V 346 (473)
Q Consensus 273 ~~~V~vs~Gs~~~-~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~lp~~~~~~~~--~~nv~-v~~~~pq--~ 346 (473)
+..+++..|.... ...+.+.+.+..+.+.+.+++++ +... ..+.+.+.+... +.++. ...|-.+ .
T Consensus 281 ~~~~i~~vGRl~~~KG~~~li~a~~~l~~~~~~lviv-G~g~--------~~~~~~l~~l~~~~~~~v~~~~g~~~~~~~ 351 (466)
T PRK00654 281 DAPLFAMVSRLTEQKGLDLVLEALPELLEQGGQLVLL-GTGD--------PELEEAFRALAARYPGKVGVQIGYDEALAH 351 (466)
T ss_pred CCcEEEEeeccccccChHHHHHHHHHHHhcCCEEEEE-ecCc--------HHHHHHHHHHHHHCCCcEEEEEeCCHHHHH
Confidence 4556777788753 23333333333333346666555 4321 111122322111 23443 3456333 2
Q ss_pred HhhhccCccceeec---cCch-hHHHHHhhCCeEecCcccc--cchhhHHHHHHHhcceEEeccCCCCCCCHHHHHHHHH
Q 042753 347 AILRHKAVGAFLTH---CGWN-SVLEGVSAGVVMLTWPMDA--DQYTNAQLLVDQLGVGIRVGEGTRNIPESDELARLLA 420 (473)
Q Consensus 347 ~lL~~~~v~~~ItH---gG~~-s~~eal~~GvP~l~~P~~~--DQ~~na~rv~~~~G~G~~l~~~~~~~~~~~~l~~~i~ 420 (473)
.+++.+++ +|.- -|+| +.+||+++|+|.|+....+ |.-.....-.+. +.|..++ .-+.+++.++|.
T Consensus 352 ~~~~~aDv--~v~PS~~E~~gl~~lEAma~G~p~V~~~~gG~~e~v~~~~~~~~~-~~G~lv~-----~~d~~~la~~i~ 423 (466)
T PRK00654 352 RIYAGADM--FLMPSRFEPCGLTQLYALRYGTLPIVRRTGGLADTVIDYNPEDGE-ATGFVFD-----DFNAEDLLRALR 423 (466)
T ss_pred HHHhhCCE--EEeCCCCCCchHHHHHHHHCCCCEEEeCCCCccceeecCCCCCCC-CceEEeC-----CCCHHHHHHHHH
Confidence 47788887 6542 3444 8899999999998864432 211110000112 5687776 357899999999
Q ss_pred HHhC---CcHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHhh
Q 042753 421 QSVD---GPRRERLKARELSGAALSAVVKGGSSDRDLNDFIKRINEL 464 (473)
Q Consensus 421 ~~l~---~~~~~~~~a~~~~~~~~~~~~~~gs~~~~~~~~~~~~~~~ 464 (473)
++++ ++ .. .++++.... +..-|-++.++++++...+.
T Consensus 424 ~~l~~~~~~-~~---~~~~~~~~~---~~~fsw~~~a~~~~~lY~~~ 463 (466)
T PRK00654 424 RALELYRQP-PL---WRALQRQAM---AQDFSWDKSAEEYLELYRRL 463 (466)
T ss_pred HHHHHhcCH-HH---HHHHHHHHh---ccCCChHHHHHHHHHHHHHH
Confidence 9886 32 22 222322222 23456677777777665543
|
|
| >PLN02949 transferase, transferring glycosyl groups | Back alignment and domain information |
|---|
Probab=98.00 E-value=0.02 Score=57.89 Aligned_cols=115 Identities=20% Similarity=0.196 Sum_probs=67.5
Q ss_pred CCCeEeecCccHHH---hhhccCccceee---ccCch-hHHHHHhhCCeEecCcccccchhhHHHHHHH-hc-ceEEecc
Q 042753 334 GRGYVIRGWSQQVA---ILRHKAVGAFLT---HCGWN-SVLEGVSAGVVMLTWPMDADQYTNAQLLVDQ-LG-VGIRVGE 404 (473)
Q Consensus 334 ~~nv~v~~~~pq~~---lL~~~~v~~~It---HgG~~-s~~eal~~GvP~l~~P~~~DQ~~na~rv~~~-~G-~G~~l~~ 404 (473)
.++|....++|+.+ +|..+++ +|+ +-|+| ++.||+++|+|+|+....+--. ..+.+. .| .|...
T Consensus 334 ~~~V~f~g~v~~~el~~ll~~a~~--~v~~s~~E~FGivvlEAMA~G~PVIa~~~gGp~~---eIV~~~~~g~tG~l~-- 406 (463)
T PLN02949 334 DGDVEFHKNVSYRDLVRLLGGAVA--GLHSMIDEHFGISVVEYMAAGAVPIAHNSAGPKM---DIVLDEDGQQTGFLA-- 406 (463)
T ss_pred CCcEEEeCCCCHHHHHHHHHhCcE--EEeCCccCCCChHHHHHHHcCCcEEEeCCCCCcc---eeeecCCCCcccccC--
Confidence 45788889998654 6777876 552 23334 7999999999999986432100 001100 01 23211
Q ss_pred CCCCCCCHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHhh
Q 042753 405 GTRNIPESDELARLLAQSVDGPRRERLKARELSGAALSAVVKGGSSDRDLNDFIKRINEL 464 (473)
Q Consensus 405 ~~~~~~~~~~l~~~i~~~l~~~~~~~~~a~~~~~~~~~~~~~~gs~~~~~~~~~~~~~~~ 464 (473)
-+.+++.++|.+++++++..++ ++++..++.++. -|.+...+++.+.+...
T Consensus 407 -----~~~~~la~ai~~ll~~~~~~r~---~m~~~ar~~~~~-FS~e~~~~~~~~~i~~l 457 (463)
T PLN02949 407 -----TTVEEYADAILEVLRMRETERL---EIAAAARKRANR-FSEQRFNEDFKDAIRPI 457 (463)
T ss_pred -----CCHHHHHHHHHHHHhCCHHHHH---HHHHHHHHHHHH-cCHHHHHHHHHHHHHHH
Confidence 2789999999999985312222 222222222222 55677777777777665
|
|
| >cd03806 GT1_ALG11_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=97.99 E-value=0.0095 Score=59.71 Aligned_cols=80 Identities=14% Similarity=0.066 Sum_probs=53.1
Q ss_pred CCCeEeecCccHHH---hhhccCccceeec----cCchhHHHHHhhCCeEecCcccccchhhHHHHH---HHhcceEEec
Q 042753 334 GRGYVIRGWSQQVA---ILRHKAVGAFLTH----CGWNSVLEGVSAGVVMLTWPMDADQYTNAQLLV---DQLGVGIRVG 403 (473)
Q Consensus 334 ~~nv~v~~~~pq~~---lL~~~~v~~~ItH----gG~~s~~eal~~GvP~l~~P~~~DQ~~na~rv~---~~~G~G~~l~ 403 (473)
.++|....++|+.+ +|..+++ +|+- |=.-++.||+++|+|+|+.-..+.-. ..+. .. ..|...+
T Consensus 304 ~~~V~f~g~v~~~~l~~~l~~adv--~v~~s~~E~Fgi~~lEAMa~G~pvIa~~~ggp~~---~iv~~~~~g-~~G~l~~ 377 (419)
T cd03806 304 EDKVEFVVNAPFEELLEELSTASI--GLHTMWNEHFGIGVVEYMAAGLIPLAHASGGPLL---DIVVPWDGG-PTGFLAS 377 (419)
T ss_pred CCeEEEecCCCHHHHHHHHHhCeE--EEECCccCCcccHHHHHHHcCCcEEEEcCCCCch---heeeccCCC-CceEEeC
Confidence 35788889998754 6777886 4431 22348899999999999864332111 1111 12 4565432
Q ss_pred cCCCCCCCHHHHHHHHHHHhCCc
Q 042753 404 EGTRNIPESDELARLLAQSVDGP 426 (473)
Q Consensus 404 ~~~~~~~~~~~l~~~i~~~l~~~ 426 (473)
+.+++.++|.++++++
T Consensus 378 -------d~~~la~ai~~ll~~~ 393 (419)
T cd03806 378 -------TAEEYAEAIEKILSLS 393 (419)
T ss_pred -------CHHHHHHHHHHHHhCC
Confidence 6899999999999875
|
ALG11 in yeast is involved in adding the final 1,2-linked Man to the Man5GlcNAc2-PP-Dol synthesized on the cytosolic face of the ER. The deletion analysis of ALG11 was shown to block the early steps of core biosynthesis that takes place on the cytoplasmic face of the ER and lead to a defect in the assembly of lipid-linked oligosaccharides. |
| >COG5017 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=97.87 E-value=0.00036 Score=55.54 Aligned_cols=127 Identities=14% Similarity=0.236 Sum_probs=79.6
Q ss_pred EEEEeCCcccCCHHHHH--HHHHHHHhCCCcEEEEEeCCCccCCcccCCCCchhhHHhhcCCCeEeecC--ccH-HHhhh
Q 042753 276 VYVCFGSRYVLTAKQIH--ELAAALEKTDVDFVYCVREPDERHASQDCGVLPDGFEDRVAGRGYVIRGW--SQQ-VAILR 350 (473)
Q Consensus 276 V~vs~Gs~~~~~~~~~~--~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~v~~~--~pq-~~lL~ 350 (473)
+||+-||....-...+. ++.+-.+.-..++|+.++.. +..|- ++..+.+| -+- ..+..
T Consensus 2 ifVTvGstf~~f~rlv~k~e~~el~~~i~e~lIvQyGn~---------d~kpv--------agl~v~~F~~~~kiQsli~ 64 (161)
T COG5017 2 IFVTVGSTFYPFNRLVLKIEVLELTELIQEELIVQYGNG---------DIKPV--------AGLRVYGFDKEEKIQSLIH 64 (161)
T ss_pred eEEEecCccchHHHHHhhHHHHHHHHHhhhheeeeecCC---------Ccccc--------cccEEEeechHHHHHHHhh
Confidence 78999998431111111 12222333456899999985 33441 23344344 443 34555
Q ss_pred ccCccceeeccCchhHHHHHhhCCeEecCcccc--------cchhhHHHHHHHhcceEEeccCCCCCCCHHHHHHHHHHH
Q 042753 351 HKAVGAFLTHCGWNSVLEGVSAGVVMLTWPMDA--------DQYTNAQLLVDQLGVGIRVGEGTRNIPESDELARLLAQS 422 (473)
Q Consensus 351 ~~~v~~~ItHgG~~s~~eal~~GvP~l~~P~~~--------DQ~~na~rv~~~~G~G~~l~~~~~~~~~~~~l~~~i~~~ 422 (473)
.+++ +|.|+|.||++.++..++|.+++|... .|-..|..++ ..+.-+..+. .+..-.+.+.....++
T Consensus 65 darI--VISHaG~GSIL~~~rl~kplIv~pr~s~y~elvDdHQvela~kla-e~~~vv~~sp--te~~L~a~l~~s~~~v 139 (161)
T COG5017 65 DARI--VISHAGEGSILLLLRLDKPLIVVPRSSQYQELVDDHQVELALKLA-EINYVVACSP--TELVLQAGLQVSVADV 139 (161)
T ss_pred cceE--EEeccCcchHHHHhhcCCcEEEEECchhHHHhhhhHHHHHHHHHH-hcCceEEEcC--CchhhHHhHhhhhhhh
Confidence 5665 999999999999999999999999754 6888899998 4477666662 2222344444445555
Q ss_pred hC
Q 042753 423 VD 424 (473)
Q Consensus 423 l~ 424 (473)
+.
T Consensus 140 ~~ 141 (161)
T COG5017 140 LH 141 (161)
T ss_pred cC
Confidence 54
|
|
| >TIGR02095 glgA glycogen/starch synthases, ADP-glucose type | Back alignment and domain information |
|---|
Probab=97.86 E-value=0.032 Score=56.90 Aligned_cols=164 Identities=13% Similarity=0.093 Sum_probs=88.7
Q ss_pred CcEEEEEeCCccc-CCHHHHHHHHHHHHhCCCcEEEEEeCCCccCCcccCCCCchhhHHhh--cCCCeEeecCccHH---
Q 042753 273 ESVVYVCFGSRYV-LTAKQIHELAAALEKTDVDFVYCVREPDERHASQDCGVLPDGFEDRV--AGRGYVIRGWSQQV--- 346 (473)
Q Consensus 273 ~~~V~vs~Gs~~~-~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~lp~~~~~~~--~~~nv~v~~~~pq~--- 346 (473)
+..+++..|.... ...+.+.+.+..+.+.+.++++. +... ....+.+.+.. .+.++.+....+..
T Consensus 290 ~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~lvi~-G~g~--------~~~~~~l~~~~~~~~~~v~~~~~~~~~~~~ 360 (473)
T TIGR02095 290 DVPLFGVISRLTQQKGVDLLLAALPELLELGGQLVVL-GTGD--------PELEEALRELAERYPGNVRVIIGYDEALAH 360 (473)
T ss_pred CCCEEEEEecCccccChHHHHHHHHHHHHcCcEEEEE-CCCC--------HHHHHHHHHHHHHCCCcEEEEEcCCHHHHH
Confidence 4456677788754 23344444444444445555443 4321 11222232211 13455544444443
Q ss_pred HhhhccCccceeec---cCch-hHHHHHhhCCeEecCcccccchhhHHHHHH-----HhcceEEeccCCCCCCCHHHHHH
Q 042753 347 AILRHKAVGAFLTH---CGWN-SVLEGVSAGVVMLTWPMDADQYTNAQLLVD-----QLGVGIRVGEGTRNIPESDELAR 417 (473)
Q Consensus 347 ~lL~~~~v~~~ItH---gG~~-s~~eal~~GvP~l~~P~~~DQ~~na~rv~~-----~~G~G~~l~~~~~~~~~~~~l~~ 417 (473)
.+++.+++ ++.- -|+| +.+||+++|+|+|+....+ ....+.+ .-+.|..++ .-+.+++.+
T Consensus 361 ~~~~~aDv--~l~pS~~E~~gl~~lEAma~G~pvI~s~~gg----~~e~v~~~~~~~~~~~G~l~~-----~~d~~~la~ 429 (473)
T TIGR02095 361 LIYAGADF--ILMPSRFEPCGLTQLYAMRYGTVPIVRRTGG----LADTVVDGDPEAESGTGFLFE-----EYDPGALLA 429 (473)
T ss_pred HHHHhCCE--EEeCCCcCCcHHHHHHHHHCCCCeEEccCCC----ccceEecCCCCCCCCceEEeC-----CCCHHHHHH
Confidence 47788887 5543 2444 7899999999999865432 1112220 115677776 457889999
Q ss_pred HHHHHhC----CcHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHh
Q 042753 418 LLAQSVD----GPRRERLKARELSGAALSAVVKGGSSDRDLNDFIKRINE 463 (473)
Q Consensus 418 ~i~~~l~----~~~~~~~~a~~~~~~~~~~~~~~gs~~~~~~~~~~~~~~ 463 (473)
+|.+++. ++ ... +++++... ..--|-++.++++++..++
T Consensus 430 ~i~~~l~~~~~~~-~~~---~~~~~~~~---~~~fsw~~~a~~~~~~Y~~ 472 (473)
T TIGR02095 430 ALSRALRLYRQDP-SLW---EALQKNAM---SQDFSWDKSAKQYVELYRS 472 (473)
T ss_pred HHHHHHHHHhcCH-HHH---HHHHHHHh---ccCCCcHHHHHHHHHHHHh
Confidence 9999886 43 322 22322222 2345667777777766543
|
This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate. |
| >cd04950 GT1_like_1 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds | Back alignment and domain information |
|---|
Probab=97.84 E-value=0.038 Score=54.50 Aligned_cols=109 Identities=12% Similarity=0.061 Sum_probs=66.4
Q ss_pred CCCeEeecCccHHH---hhhccCcccee------eccCc-hhHHHHHhhCCeEecCcccccchhhHHHHHHHhcceEEec
Q 042753 334 GRGYVIRGWSQQVA---ILRHKAVGAFL------THCGW-NSVLEGVSAGVVMLTWPMDADQYTNAQLLVDQLGVGIRVG 403 (473)
Q Consensus 334 ~~nv~v~~~~pq~~---lL~~~~v~~~I------tHgG~-~s~~eal~~GvP~l~~P~~~DQ~~na~rv~~~~G~G~~l~ 403 (473)
.+||...+++|+.+ .+.++++..+- +.++. +.+.|++++|+|+|+.++ ...+. . +-|..+.
T Consensus 253 ~~nV~~~G~~~~~~l~~~l~~~Dv~l~P~~~~~~~~~~~P~Kl~EylA~G~PVVat~~-------~~~~~-~-~~~~~~~ 323 (373)
T cd04950 253 LPNVHYLGPKPYKELPAYLAGFDVAILPFRLNELTRATSPLKLFEYLAAGKPVVATPL-------PEVRR-Y-EDEVVLI 323 (373)
T ss_pred CCCEEEeCCCCHHHHHHHHHhCCEEecCCccchhhhcCCcchHHHHhccCCCEEecCc-------HHHHh-h-cCcEEEe
Confidence 47899999998655 57778873221 22332 458999999999998763 12222 3 2233333
Q ss_pred cCCCCCCCHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHh
Q 042753 404 EGTRNIPESDELARLLAQSVDGPRRERLKARELSGAALSAVVKGGSSDRDLNDFIKRINE 463 (473)
Q Consensus 404 ~~~~~~~~~~~l~~~i~~~l~~~~~~~~~a~~~~~~~~~~~~~~gs~~~~~~~~~~~~~~ 463 (473)
. -+.+++.++|++++.+++..+.+. ... + ...-|-+..++++++.+.+
T Consensus 324 ---~--~d~~~~~~ai~~~l~~~~~~~~~~--~~~-~----~~~~sW~~~a~~~~~~l~~ 371 (373)
T cd04950 324 ---A--DDPEEFVAAIEKALLEDGPARERR--RLR-L----AAQNSWDARAAEMLEALQE 371 (373)
T ss_pred ---C--CCHHHHHHHHHHHHhcCCchHHHH--HHH-H----HHHCCHHHHHHHHHHHHHh
Confidence 1 279999999999876541211111 111 1 2235667777787776665
|
The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center |
| >PF13844 Glyco_transf_41: Glycosyl transferase family 41; PDB: 3PE4_C 3PE3_D 3TAX_C 2XGO_A 2JLB_B 2XGM_A 2VSY_B 2XGS_B 2VSN_A | Back alignment and domain information |
|---|
Probab=97.83 E-value=0.00036 Score=69.15 Aligned_cols=173 Identities=13% Similarity=0.167 Sum_probs=90.5
Q ss_pred CCCcEEEEEeCCcccCCHHHHHHHHHHHHhCCCcEEEEEeCCCccCCcccCCCCchhhHHhh-----cCCCeEeecCccH
Q 042753 271 RDESVVYVCFGSRYVLTAKQIHELAAALEKTDVDFVYCVREPDERHASQDCGVLPDGFEDRV-----AGRGYVIRGWSQQ 345 (473)
Q Consensus 271 ~~~~~V~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~lp~~~~~~~-----~~~nv~v~~~~pq 345 (473)
++..++|.||.+.....++.+.--.+.|++.+.-.+|....+... .+.+.++. ..+.+++..+.|+
T Consensus 282 p~d~vvF~~fn~~~KI~p~~l~~W~~IL~~vP~S~L~L~~~~~~~---------~~~l~~~~~~~Gv~~~Ri~f~~~~~~ 352 (468)
T PF13844_consen 282 PEDAVVFGSFNNLFKISPETLDLWARILKAVPNSRLWLLRFPASG---------EARLRRRFAAHGVDPDRIIFSPVAPR 352 (468)
T ss_dssp -SSSEEEEE-S-GGG--HHHHHHHHHHHHHSTTEEEEEEETSTTH---------HHHHHHHHHHTTS-GGGEEEEE---H
T ss_pred CCCceEEEecCccccCCHHHHHHHHHHHHhCCCcEEEEeeCCHHH---------HHHHHHHHHHcCCChhhEEEcCCCCH
Confidence 467899999999999999999999999999999899998765310 12222222 2344667777776
Q ss_pred HHhh---hccCcccee---eccCchhHHHHHhhCCeEecCcccccchhhHHHHHHHhcceEEeccCCCCCCCHHHHHHHH
Q 042753 346 VAIL---RHKAVGAFL---THCGWNSVLEGVSAGVVMLTWPMDADQYTNAQLLVDQLGVGIRVGEGTRNIPESDELARLL 419 (473)
Q Consensus 346 ~~lL---~~~~v~~~I---tHgG~~s~~eal~~GvP~l~~P~~~DQ~~na~rv~~~~G~G~~l~~~~~~~~~~~~l~~~i 419 (473)
.+-| ..+++ ++ ..+|.+|++|||+.|||+|..|--.=.-..+.-+-..+|+.-.+- .+.++-.+..
T Consensus 353 ~ehl~~~~~~DI--~LDT~p~nG~TTt~dALwmGVPvVTl~G~~~~sR~~aSiL~~lGl~ElIA------~s~~eYv~~A 424 (468)
T PF13844_consen 353 EEHLRRYQLADI--CLDTFPYNGGTTTLDALWMGVPVVTLPGETMASRVGASILRALGLPELIA------DSEEEYVEIA 424 (468)
T ss_dssp HHHHHHGGG-SE--EE--SSS--SHHHHHHHHHT--EEB---SSGGGSHHHHHHHHHT-GGGB-------SSHHHHHHHH
T ss_pred HHHHHHhhhCCE--EeeCCCCCCcHHHHHHHHcCCCEEeccCCCchhHHHHHHHHHcCCchhcC------CCHHHHHHHH
Confidence 5544 44665 33 458899999999999999999954333333333333667765554 2344444444
Q ss_pred HHHhCCcHHHHHH-HHHHHHHHHHHHhcCCChHHHHHHHHHHHHh
Q 042753 420 AQSVDGPRRERLK-ARELSGAALSAVVKGGSSDRDLNDFIKRINE 463 (473)
Q Consensus 420 ~~~l~~~~~~~~~-a~~~~~~~~~~~~~~gs~~~~~~~~~~~~~~ 463 (473)
-++-+|. .++++ -+++++...+ .+-......+..+++.+.+
T Consensus 425 v~La~D~-~~l~~lR~~Lr~~~~~--SpLfd~~~~ar~lE~a~~~ 466 (468)
T PF13844_consen 425 VRLATDP-ERLRALRAKLRDRRSK--SPLFDPKRFARNLEAAYRQ 466 (468)
T ss_dssp HHHHH-H-HHHHHHHHHHHHHHHH--SGGG-HHHHHHHHHHHHHH
T ss_pred HHHhCCH-HHHHHHHHHHHHHHhh--CCCCCHHHHHHHHHHHHHH
Confidence 4555665 43322 2233333322 1223345566666666554
|
|
| >PLN02501 digalactosyldiacylglycerol synthase | Back alignment and domain information |
|---|
Probab=97.67 E-value=0.035 Score=57.60 Aligned_cols=100 Identities=9% Similarity=0.073 Sum_probs=63.1
Q ss_pred eEeecCccHH-HhhhccCccceeec----cCchhHHHHHhhCCeEecCcccccchhhHHHHHHHhcceEEeccCCCCCCC
Q 042753 337 YVIRGWSQQV-AILRHKAVGAFLTH----CGWNSVLEGVSAGVVMLTWPMDADQYTNAQLLVDQLGVGIRVGEGTRNIPE 411 (473)
Q Consensus 337 v~v~~~~pq~-~lL~~~~v~~~ItH----gG~~s~~eal~~GvP~l~~P~~~DQ~~na~rv~~~~G~G~~l~~~~~~~~~ 411 (473)
+....+.++. ++++.+++ ||.- |=..+++||+++|+|+|+....+... +. . |.+..+. -+
T Consensus 603 V~FLG~~dd~~~lyasaDV--FVlPS~sEgFGlVlLEAMA~GlPVVATd~pG~e~-----V~-~-g~nGll~------~D 667 (794)
T PLN02501 603 LNFLKGRDHADDSLHGYKV--FINPSISDVLCTATAEALAMGKFVVCADHPSNEF-----FR-S-FPNCLTY------KT 667 (794)
T ss_pred EEecCCCCCHHHHHHhCCE--EEECCCcccchHHHHHHHHcCCCEEEecCCCCce-----Ee-e-cCCeEec------CC
Confidence 5555666655 48988887 6653 33668999999999999987654321 22 2 3332332 35
Q ss_pred HHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHH
Q 042753 412 SDELARLLAQSVDGPRRERLKARELSGAALSAVVKGGSSDRDLNDFIKRI 461 (473)
Q Consensus 412 ~~~l~~~i~~~l~~~~~~~~~a~~~~~~~~~~~~~~gs~~~~~~~~~~~~ 461 (473)
.+++.++|.++|+++ ..+..+.+ ...-|-+..+++++++-
T Consensus 668 ~EafAeAI~~LLsd~-~~rl~~~a---------~~~~SWeAaadrLle~~ 707 (794)
T PLN02501 668 SEDFVAKVKEALANE-PQPLTPEQ---------RYNLSWEAATQRFMEYS 707 (794)
T ss_pred HHHHHHHHHHHHhCc-hhhhHHHH---------HhhCCHHHHHHHHHHhh
Confidence 899999999999986 43322221 11244566666666654
|
|
| >cd04949 GT1_gtfA_like This family is most closely related to the GT1 family of glycosyltransferases and is named after gtfA in Streptococcus gordonii, where it plays a role in the O-linked glycosylation of GspB, a cell surface glycoprotein involved in platelet binding | Back alignment and domain information |
|---|
Probab=97.66 E-value=0.0092 Score=58.69 Aligned_cols=98 Identities=13% Similarity=0.231 Sum_probs=63.9
Q ss_pred CCCeEeecCccHH-HhhhccCccceeec--cCchhHHHHHhhCCeEecCcccccchhhHHHHHHHhcceEEeccCCCCCC
Q 042753 334 GRGYVIRGWSQQV-AILRHKAVGAFLTH--CGWNSVLEGVSAGVVMLTWPMDADQYTNAQLLVDQLGVGIRVGEGTRNIP 410 (473)
Q Consensus 334 ~~nv~v~~~~pq~-~lL~~~~v~~~ItH--gG~~s~~eal~~GvP~l~~P~~~DQ~~na~rv~~~~G~G~~l~~~~~~~~ 410 (473)
..++.+.++.++. .++..+++-.+.++ |...++.||+++|+|+|+..... .....+.+. ..|..++ .-
T Consensus 260 ~~~v~~~g~~~~~~~~~~~ad~~v~~S~~Eg~~~~~lEAma~G~PvI~~~~~~---g~~~~v~~~-~~G~lv~-----~~ 330 (372)
T cd04949 260 EDYVFLKGYTRDLDEVYQKAQLSLLTSQSEGFGLSLMEALSHGLPVISYDVNY---GPSEIIEDG-ENGYLVP-----KG 330 (372)
T ss_pred cceEEEcCCCCCHHHHHhhhhEEEecccccccChHHHHHHhCCCCEEEecCCC---CcHHHcccC-CCceEeC-----CC
Confidence 3467776666553 47888887333333 34568999999999999864331 123344423 5677776 35
Q ss_pred CHHHHHHHHHHHhCCc---HHHHHHHHHHHHHH
Q 042753 411 ESDELARLLAQSVDGP---RRERLKARELSGAA 440 (473)
Q Consensus 411 ~~~~l~~~i~~~l~~~---~~~~~~a~~~~~~~ 440 (473)
+.+++.++|.++++|+ ..+.+++.+.++.+
T Consensus 331 d~~~la~~i~~ll~~~~~~~~~~~~a~~~~~~~ 363 (372)
T cd04949 331 DIEALAEAIIELLNDPKLLQKFSEAAYENAERY 363 (372)
T ss_pred cHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHh
Confidence 7999999999999986 34445555444433
|
In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltra |
| >cd04946 GT1_AmsK_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=97.64 E-value=0.0013 Score=65.72 Aligned_cols=165 Identities=16% Similarity=0.206 Sum_probs=93.3
Q ss_pred CCcEEEEEeCCcccC-CHHHHHHHHHHHHhC--CCcEEEEEeCCCccCCcccCCCCchhhHHhh----cCCCeEeecCcc
Q 042753 272 DESVVYVCFGSRYVL-TAKQIHELAAALEKT--DVDFVYCVREPDERHASQDCGVLPDGFEDRV----AGRGYVIRGWSQ 344 (473)
Q Consensus 272 ~~~~V~vs~Gs~~~~-~~~~~~~~~~al~~~--~~~~i~~~~~~~~~~~~~~~~~lp~~~~~~~----~~~nv~v~~~~p 344 (473)
+++..+++.|..... ..+.+-+.+..+.+. +.++.|..-+.. ...+.+.+.. ...++...+|++
T Consensus 228 ~~~~~il~~Grl~~~Kg~~~li~a~~~l~~~~p~~~l~~~iiG~g---------~~~~~l~~~~~~~~~~~~V~f~G~v~ 298 (407)
T cd04946 228 DDTLRIVSCSYLVPVKRVDLIIKALAALAKARPSIKIKWTHIGGG---------PLEDTLKELAESKPENISVNFTGELS 298 (407)
T ss_pred CCCEEEEEeeccccccCHHHHHHHHHHHHHhCCCceEEEEEEeCc---------hHHHHHHHHHHhcCCCceEEEecCCC
Confidence 345667778887542 233333333333332 246666654431 1112222221 235688889999
Q ss_pred HHHh---hhccCccceeeccC----chhHHHHHhhCCeEecCcccccchhhHHHHHHHhcceEEeccCCCCCCCHHHHHH
Q 042753 345 QVAI---LRHKAVGAFLTHCG----WNSVLEGVSAGVVMLTWPMDADQYTNAQLLVDQLGVGIRVGEGTRNIPESDELAR 417 (473)
Q Consensus 345 q~~l---L~~~~v~~~ItHgG----~~s~~eal~~GvP~l~~P~~~DQ~~na~rv~~~~G~G~~l~~~~~~~~~~~~l~~ 417 (473)
+.++ +..++..+||..+- .++++||+++|+|+|+... ......+. ..+.|..+. ...+.+++.+
T Consensus 299 ~~e~~~~~~~~~~~v~v~~S~~Eg~p~~llEAma~G~PVIas~v----gg~~e~i~-~~~~G~l~~----~~~~~~~la~ 369 (407)
T cd04946 299 NSEVYKLYKENPVDVFVNLSESEGLPVSIMEAMSFGIPVIATNV----GGTPEIVD-NGGNGLLLS----KDPTPNELVS 369 (407)
T ss_pred hHHHHHHHhhcCCCEEEeCCccccccHHHHHHHHcCCCEEeCCC----CCcHHHhc-CCCcEEEeC----CCCCHHHHHH
Confidence 7654 44433334665443 5689999999999998643 34555565 513787775 2457899999
Q ss_pred HHHHHhCCcHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHH
Q 042753 418 LLAQSVDGPRRERLKARELSGAALSAVVKGGSSDRDLNDFI 458 (473)
Q Consensus 418 ~i~~~l~~~~~~~~~a~~~~~~~~~~~~~~gs~~~~~~~~~ 458 (473)
+|.++++|+ ..++ ++++..++.+.+.-+.+...++++
T Consensus 370 ~I~~ll~~~-~~~~---~m~~~ar~~~~~~f~~~~~~~~~~ 406 (407)
T cd04946 370 SLSKFIDNE-EEYQ---TMREKAREKWEENFNASKNYREFA 406 (407)
T ss_pred HHHHHHhCH-HHHH---HHHHHHHHHHHHHcCHHHhHHHhc
Confidence 999999986 3332 223333322233344555555543
|
AmsK is involved in the biosynthesis of amylovoran, which functions as a virulence factor. It functions as a glycosyl transferase which transfers galactose from UDP-galactose to a lipid-linked amylovoran-subunit precursor. The members of this family are found mainly in bacteria and Archaea. |
| >cd03813 GT1_like_3 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=97.61 E-value=0.023 Score=57.98 Aligned_cols=86 Identities=21% Similarity=0.264 Sum_probs=61.0
Q ss_pred CCCeEeecCccHHHhhhccCccceeec----cCchhHHHHHhhCCeEecCcccccchhhHHHHHHH----hc-ceEEecc
Q 042753 334 GRGYVIRGWSQQVAILRHKAVGAFLTH----CGWNSVLEGVSAGVVMLTWPMDADQYTNAQLLVDQ----LG-VGIRVGE 404 (473)
Q Consensus 334 ~~nv~v~~~~pq~~lL~~~~v~~~ItH----gG~~s~~eal~~GvP~l~~P~~~DQ~~na~rv~~~----~G-~G~~l~~ 404 (473)
.++|.+.+...-.++++.+++ +|.- |--++++||+++|+|+|+. |.......+.+. +| .|..++
T Consensus 353 ~~~V~f~G~~~v~~~l~~aDv--~vlpS~~Eg~p~~vlEAma~G~PVVat----d~g~~~elv~~~~~~~~g~~G~lv~- 425 (475)
T cd03813 353 EDNVKFTGFQNVKEYLPKLDV--LVLTSISEGQPLVILEAMAAGIPVVAT----DVGSCRELIEGADDEALGPAGEVVP- 425 (475)
T ss_pred CCeEEEcCCccHHHHHHhCCE--EEeCchhhcCChHHHHHHHcCCCEEEC----CCCChHHHhcCCcccccCCceEEEC-
Confidence 367777776666778888887 4433 3456899999999999985 444444555421 11 677776
Q ss_pred CCCCCCCHHHHHHHHHHHhCCcHHHHH
Q 042753 405 GTRNIPESDELARLLAQSVDGPRRERL 431 (473)
Q Consensus 405 ~~~~~~~~~~l~~~i~~~l~~~~~~~~ 431 (473)
..+.+++.++|.++++|+ ..++
T Consensus 426 ----~~d~~~la~ai~~ll~~~-~~~~ 447 (475)
T cd03813 426 ----PADPEALARAILRLLKDP-ELRR 447 (475)
T ss_pred ----CCCHHHHHHHHHHHhcCH-HHHH
Confidence 457899999999999987 4433
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >TIGR02918 accessory Sec system glycosylation protein GtfA | Back alignment and domain information |
|---|
Probab=97.51 E-value=0.038 Score=56.55 Aligned_cols=164 Identities=12% Similarity=0.113 Sum_probs=94.9
Q ss_pred CcEEEEEeCCcccCCHHHHHHHHHHHHh----CCCcEEEEEeCCCccCCcccCCCCchhhHHhh----cCCCeEeecCcc
Q 042753 273 ESVVYVCFGSRYVLTAKQIHELAAALEK----TDVDFVYCVREPDERHASQDCGVLPDGFEDRV----AGRGYVIRGWSQ 344 (473)
Q Consensus 273 ~~~V~vs~Gs~~~~~~~~~~~~~~al~~----~~~~~i~~~~~~~~~~~~~~~~~lp~~~~~~~----~~~nv~v~~~~p 344 (473)
++.++++.|.... ...+..+++|+.. .+.--+..++... ..+.+.+.. ..++|...++.+
T Consensus 318 ~~~~il~vGrl~~--~Kg~~~li~A~~~l~~~~p~~~l~i~G~G~----------~~~~l~~~i~~~~l~~~V~f~G~~~ 385 (500)
T TIGR02918 318 KPFSIITASRLAK--EKHIDWLVKAVVKAKKSVPELTFDIYGEGG----------EKQKLQKIINENQAQDYIHLKGHRN 385 (500)
T ss_pred CCeEEEEEecccc--ccCHHHHHHHHHHHHhhCCCeEEEEEECch----------hHHHHHHHHHHcCCCCeEEEcCCCC
Confidence 4456677788753 2334445555542 2222233455532 112333222 235677788888
Q ss_pred HHHhhhccCccceee---ccC-chhHHHHHhhCCeEecCcccccchhhHHHHHHHhcceEEeccCCCCCCC----HHHHH
Q 042753 345 QVAILRHKAVGAFLT---HCG-WNSVLEGVSAGVVMLTWPMDADQYTNAQLLVDQLGVGIRVGEGTRNIPE----SDELA 416 (473)
Q Consensus 345 q~~lL~~~~v~~~It---HgG-~~s~~eal~~GvP~l~~P~~~DQ~~na~rv~~~~G~G~~l~~~~~~~~~----~~~l~ 416 (473)
..+++..+++ +|. .-| ..+++||+++|+|+|+....+ .....+. .-.-|..+..+ .+.-+ .++++
T Consensus 386 ~~~~~~~adv--~v~pS~~Egfgl~~lEAma~G~PVI~~dv~~---G~~eiI~-~g~nG~lv~~~-~~~~d~~~~~~~la 458 (500)
T TIGR02918 386 LSEVYKDYEL--YLSASTSEGFGLTLMEAVGSGLGMIGFDVNY---GNPTFIE-DNKNGYLIPID-EEEDDEDQIITALA 458 (500)
T ss_pred HHHHHHhCCE--EEEcCccccccHHHHHHHHhCCCEEEecCCC---CCHHHcc-CCCCEEEEeCC-ccccchhHHHHHHH
Confidence 8889999997 664 233 468999999999999975421 2333444 31357766510 11122 78899
Q ss_pred HHHHHHhCCc--HHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHh
Q 042753 417 RLLAQSVDGP--RRERLKARELSGAALSAVVKGGSSDRDLNDFIKRINE 463 (473)
Q Consensus 417 ~~i~~~l~~~--~~~~~~a~~~~~~~~~~~~~~gs~~~~~~~~~~~~~~ 463 (473)
++|.++++++ ..|.+++.+.++. -|.+..++++.+.+.+
T Consensus 459 ~~I~~ll~~~~~~~~~~~a~~~a~~--------fs~~~v~~~w~~ll~~ 499 (500)
T TIGR02918 459 EKIVEYFNSNDIDAFHEYSYQIAEG--------FLTANIIEKWKKLVRE 499 (500)
T ss_pred HHHHHHhChHHHHHHHHHHHHHHHh--------cCHHHHHHHHHHHHhh
Confidence 9999999543 3444455444333 4466777777776654
|
Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus. Members are associated with glycosylation of serine-rich glycoproteins exported by the accessory Sec system. |
| >PF00534 Glycos_transf_1: Glycosyl transferases group 1; InterPro: IPR001296 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=97.49 E-value=0.0015 Score=56.41 Aligned_cols=143 Identities=17% Similarity=0.177 Sum_probs=85.3
Q ss_pred CCCcEEEEEeCCccc-CCHHHHHHHHHHHHh--CCCcEEEEEeCCCccCCcccCCCCchhhHHhhcCCCeEeecCccH--
Q 042753 271 RDESVVYVCFGSRYV-LTAKQIHELAAALEK--TDVDFVYCVREPDERHASQDCGVLPDGFEDRVAGRGYVIRGWSQQ-- 345 (473)
Q Consensus 271 ~~~~~V~vs~Gs~~~-~~~~~~~~~~~al~~--~~~~~i~~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~v~~~~pq-- 345 (473)
..++.+++..|+... -..+.+-.++.-+.+ .+.-.++.++... . ...+-..........++.+..++++
T Consensus 12 ~~~~~~il~~g~~~~~K~~~~li~a~~~l~~~~~~~~~l~i~G~~~----~--~~~~~~~~~~~~~~~~i~~~~~~~~~~ 85 (172)
T PF00534_consen 12 PDKKKIILFIGRLDPEKGIDLLIEAFKKLKEKKNPNYKLVIVGDGE----Y--KKELKNLIEKLNLKENIIFLGYVPDDE 85 (172)
T ss_dssp -TTSEEEEEESESSGGGTHHHHHHHHHHHHHHHHTTEEEEEESHCC----H--HHHHHHHHHHTTCGTTEEEEESHSHHH
T ss_pred CCCCeEEEEEecCccccCHHHHHHHHHHHHhhcCCCeEEEEEcccc----c--ccccccccccccccccccccccccccc
Confidence 466778888888754 334444444444332 2333444555221 0 0001111111112357888899873
Q ss_pred -HHhhhccCccceeec----cCchhHHHHHhhCCeEecCcccccchhhHHHHHHHhcceEEeccCCCCCCCHHHHHHHHH
Q 042753 346 -VAILRHKAVGAFLTH----CGWNSVLEGVSAGVVMLTWPMDADQYTNAQLLVDQLGVGIRVGEGTRNIPESDELARLLA 420 (473)
Q Consensus 346 -~~lL~~~~v~~~ItH----gG~~s~~eal~~GvP~l~~P~~~DQ~~na~rv~~~~G~G~~l~~~~~~~~~~~~l~~~i~ 420 (473)
..++..+++ +|+. |...++.||+++|+|+|+. |...+...+.+. +.|..++ .. +.+++.++|.
T Consensus 86 l~~~~~~~di--~v~~s~~e~~~~~~~Ea~~~g~pvI~~----~~~~~~e~~~~~-~~g~~~~---~~--~~~~l~~~i~ 153 (172)
T PF00534_consen 86 LDELYKSSDI--FVSPSRNEGFGLSLLEAMACGCPVIAS----DIGGNNEIINDG-VNGFLFD---PN--DIEELADAIE 153 (172)
T ss_dssp HHHHHHHTSE--EEE-BSSBSS-HHHHHHHHTT-EEEEE----SSTHHHHHSGTT-TSEEEES---TT--SHHHHHHHHH
T ss_pred ccccccccee--ccccccccccccccccccccccceeec----cccCCceeeccc-cceEEeC---CC--CHHHHHHHHH
Confidence 447788887 6665 5677999999999999974 455555666533 5688887 33 9999999999
Q ss_pred HHhCCcHHHHHH
Q 042753 421 QSVDGPRRERLK 432 (473)
Q Consensus 421 ~~l~~~~~~~~~ 432 (473)
++++++ ++++.
T Consensus 154 ~~l~~~-~~~~~ 164 (172)
T PF00534_consen 154 KLLNDP-ELRQK 164 (172)
T ss_dssp HHHHHH-HHHHH
T ss_pred HHHCCH-HHHHH
Confidence 999986 44433
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Proteins containign this domain transfer UDP, ADP, GDP or CMP linked sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. The bacterial enzymes are involved in various biosynthetic processes that include exopolysaccharide biosynthesis, lipopolysaccharide core biosynthesis and the biosynthesis of the slime polysaccaride colanic acid. Mutations in this domain of the human N-acetylglucosaminyl-phosphatidylinositol biosynthetic protein are the cause of paroxysmal nocturnal hemoglobinuria (PNH), an acquired hemolytic blood disorder characterised by venous thrombosis, erythrocyte hemolysis, infections and defective hematopoiesis.; GO: 0009058 biosynthetic process; PDB: 2L7C_A 2IV3_B 2IUY_B 2XA9_A 2XA1_B 2X6R_A 2XMP_B 2XA2_B 2X6Q_A 3QHP_B .... |
| >PRK10125 putative glycosyl transferase; Provisional | Back alignment and domain information |
|---|
Probab=97.46 E-value=0.039 Score=55.01 Aligned_cols=114 Identities=16% Similarity=0.120 Sum_probs=65.2
Q ss_pred EEEEeCCcccCCHHHHHHHHHHHHhCCCcE-EEEEeCCCccCCcccCCCCchhhHHhhcCCCeEeecCcc-H---HHhhh
Q 042753 276 VYVCFGSRYVLTAKQIHELAAALEKTDVDF-VYCVREPDERHASQDCGVLPDGFEDRVAGRGYVIRGWSQ-Q---VAILR 350 (473)
Q Consensus 276 V~vs~Gs~~~~~~~~~~~~~~al~~~~~~~-i~~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~v~~~~p-q---~~lL~ 350 (473)
++...|............+++++...+..+ ++.++... ... ..++....+.. + .++++
T Consensus 243 ~il~v~~~~~~~~Kg~~~li~A~~~l~~~~~L~ivG~g~--------~~~---------~~~v~~~g~~~~~~~l~~~y~ 305 (405)
T PRK10125 243 KIAVVAHDLRYDGKTDQQLVREMMALGDKIELHTFGKFS--------PFT---------AGNVVNHGFETDKRKLMSALN 305 (405)
T ss_pred EEEEEEeccccCCccHHHHHHHHHhCCCCeEEEEEcCCC--------ccc---------ccceEEecCcCCHHHHHHHHH
Confidence 334445432222233466888888764433 44555431 111 13455445542 2 34566
Q ss_pred ccCccceeec----cCchhHHHHHhhCCeEecCcccccchhhHHHHHHHhcceEEeccCCCCCCCHHHHHHHH
Q 042753 351 HKAVGAFLTH----CGWNSVLEGVSAGVVMLTWPMDADQYTNAQLLVDQLGVGIRVGEGTRNIPESDELARLL 419 (473)
Q Consensus 351 ~~~v~~~ItH----gG~~s~~eal~~GvP~l~~P~~~DQ~~na~rv~~~~G~G~~l~~~~~~~~~~~~l~~~i 419 (473)
.+++ ||.- |--.+++||+++|+|+|+....+ ....+. . +-|..++ . -+.++|.+++
T Consensus 306 ~aDv--fV~pS~~Egfp~vilEAmA~G~PVVat~~gG----~~Eiv~-~-~~G~lv~---~--~d~~~La~~~ 365 (405)
T PRK10125 306 QMDA--LVFSSRVDNYPLILCEALSIGVPVIATHSDA----AREVLQ-K-SGGKTVS---E--EEVLQLAQLS 365 (405)
T ss_pred hCCE--EEECCccccCcCHHHHHHHcCCCEEEeCCCC----hHHhEe-C-CcEEEEC---C--CCHHHHHhcc
Confidence 6786 6653 34568999999999999987754 222333 4 5688887 2 3677777654
|
|
| >PLN02316 synthase/transferase | Back alignment and domain information |
|---|
Probab=97.43 E-value=0.29 Score=53.71 Aligned_cols=107 Identities=9% Similarity=0.008 Sum_probs=63.0
Q ss_pred HhhhccCccceeec----cCchhHHHHHhhCCeEecCcccc--cchhhH------HHHHHHhcceEEeccCCCCCCCHHH
Q 042753 347 AILRHKAVGAFLTH----CGWNSVLEGVSAGVVMLTWPMDA--DQYTNA------QLLVDQLGVGIRVGEGTRNIPESDE 414 (473)
Q Consensus 347 ~lL~~~~v~~~ItH----gG~~s~~eal~~GvP~l~~P~~~--DQ~~na------~rv~~~~G~G~~l~~~~~~~~~~~~ 414 (473)
.+++.+++ |+.- +=..+.+||+++|+|.|+....+ |.-... ......-+-|...+ ..+++.
T Consensus 915 ~iyaaADi--flmPS~~EP~GLvqLEAMa~GtppVvs~vGGL~DtV~d~d~~~~~~~~~g~~~tGflf~-----~~d~~a 987 (1036)
T PLN02316 915 LIYAGADF--ILVPSIFEPCGLTQLTAMRYGSIPVVRKTGGLFDTVFDVDHDKERAQAQGLEPNGFSFD-----GADAAG 987 (1036)
T ss_pred HHHHhCcE--EEeCCcccCccHHHHHHHHcCCCeEEEcCCCcHhhccccccccccccccccCCceEEeC-----CCCHHH
Confidence 57888887 7643 33458999999999888754432 211110 00000013576666 567899
Q ss_pred HHHHHHHHhCCcHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHh
Q 042753 415 LARLLAQSVDGPRRERLKARELSGAALSAVVKGGSSDRDLNDFIKRINE 463 (473)
Q Consensus 415 l~~~i~~~l~~~~~~~~~a~~~~~~~~~~~~~~gs~~~~~~~~~~~~~~ 463 (473)
|..+|.+++.. |......+++..+..+...-|-+..+++.++...+
T Consensus 988 La~AL~raL~~---~~~~~~~~~~~~r~~m~~dFSW~~~A~~Y~~LY~~ 1033 (1036)
T PLN02316 988 VDYALNRAISA---WYDGRDWFNSLCKRVMEQDWSWNRPALDYMELYHS 1033 (1036)
T ss_pred HHHHHHHHHhh---hhhhHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHH
Confidence 99999999964 22333334444444434445566666666665554
|
|
| >PRK15484 lipopolysaccharide 1,2-N-acetylglucosaminetransferase; Provisional | Back alignment and domain information |
|---|
Probab=97.42 E-value=0.016 Score=57.36 Aligned_cols=113 Identities=12% Similarity=0.135 Sum_probs=75.5
Q ss_pred CCeEeecCccHHH---hhhccCccceeec----cCc-hhHHHHHhhCCeEecCcccccchhhHHHHHHHhcceEEeccCC
Q 042753 335 RGYVIRGWSQQVA---ILRHKAVGAFLTH----CGW-NSVLEGVSAGVVMLTWPMDADQYTNAQLLVDQLGVGIRVGEGT 406 (473)
Q Consensus 335 ~nv~v~~~~pq~~---lL~~~~v~~~ItH----gG~-~s~~eal~~GvP~l~~P~~~DQ~~na~rv~~~~G~G~~l~~~~ 406 (473)
.++...+++|+.+ +++.+++ +|.. .|. .+++||+++|+|+|+.... .+...+.+. ..|..+.
T Consensus 257 ~~v~~~G~~~~~~l~~~~~~aDv--~v~pS~~~E~f~~~~lEAma~G~PVI~s~~g----g~~Eiv~~~-~~G~~l~--- 326 (380)
T PRK15484 257 DRCIMLGGQPPEKMHNYYPLADL--VVVPSQVEEAFCMVAVEAMAAGKPVLASTKG----GITEFVLEG-ITGYHLA--- 326 (380)
T ss_pred CcEEEeCCCCHHHHHHHHHhCCE--EEeCCCCccccccHHHHHHHcCCCEEEeCCC----CcHhhcccC-CceEEEe---
Confidence 5677889998654 5888997 5543 332 5788999999999997653 344445523 4676553
Q ss_pred CCCCCHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHh
Q 042753 407 RNIPESDELARLLAQSVDGPRRERLKARELSGAALSAVVKGGSSDRDLNDFIKRINE 463 (473)
Q Consensus 407 ~~~~~~~~l~~~i~~~l~~~~~~~~~a~~~~~~~~~~~~~~gs~~~~~~~~~~~~~~ 463 (473)
...+.+++.++|.++++|+ ..++ +++..++.+...-+-+..++++++.++.
T Consensus 327 -~~~d~~~la~~I~~ll~d~-~~~~----~~~~ar~~~~~~fsw~~~a~~~~~~l~~ 377 (380)
T PRK15484 327 -EPMTSDSIISDINRTLADP-ELTQ----IAEQAKDFVFSKYSWEGVTQRFEEQIHN 377 (380)
T ss_pred -CCCCHHHHHHHHHHHHcCH-HHHH----HHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 2357999999999999987 5433 3333332223445677777788877764
|
|
| >TIGR02193 heptsyl_trn_I lipopolysaccharide heptosyltransferase I | Back alignment and domain information |
|---|
Probab=97.14 E-value=0.03 Score=53.86 Aligned_cols=105 Identities=12% Similarity=0.130 Sum_probs=66.8
Q ss_pred EEEEEcCCCCCChHHHHHHHHHHHhC--CCeEEEEeCCCChhhhhhhccCCCCCCee-EEEcCCCCCCCCCChhhHHHHH
Q 042753 7 HILVYPFPTSGHIIPLLDLTNRLLTL--GLNVTVLITQNNLPLLDSLNANHPSTSLQ-SLVLPQPKWPAGSPATRLLKFM 83 (473)
Q Consensus 7 ~Il~~~~~~~GH~~p~l~La~~L~~r--Gh~Vt~~~~~~~~~~i~~~~~~~~~~~~~-f~~l~~~~~~~~~~~~~~~~~~ 83 (473)
|||++-....|++.-+.++.++|+++ +.+|++++.+.+.+.++.. +.++ +..++..... .. .+.
T Consensus 1 ~ILiir~~~iGD~vl~~p~l~~Lr~~~P~a~I~~l~~~~~~~~~~~~------p~vd~v~~~~~~~~~-----~~--~~~ 67 (319)
T TIGR02193 1 RILIVKTSSLGDVIHTLPALTDIKRALPDVEIDWVVEEGFADIVRLH------PAVDEVIPVALRRWR-----KT--LFS 67 (319)
T ss_pred CEEEEecccHHHHHHHHHHHHHHHHhCCCCEEEEEEChhHhhhhhcC------CCccEEEEechhhhh-----hc--ccc
Confidence 68889999999999999999999997 9999999999887777654 3453 4444421100 00 000
Q ss_pred HHHHHHhhHHHHHHHhcCCCCCcEEEeCCCcchHHHHHHHhCCC
Q 042753 84 RVLRELHYPALLDWFKSHPSPPVAILSDFFLGWTQGLAAELGLP 127 (473)
Q Consensus 84 ~~~~~~~~~~l~~~l~~~~~~pD~VV~D~~~~~~~~~A~~~giP 127 (473)
.... .....+.+.++.. ++|++|.-........++...+.+
T Consensus 68 ~~~~-~~~~~~~~~lr~~--~yD~vi~~~~~~~s~~l~~~~~~~ 108 (319)
T TIGR02193 68 AATW-REIKALRALLRAE--RYDAVIDAQGLIKSALVARMARGP 108 (319)
T ss_pred chhH-HHHHHHHHHHhhc--cchhhhhhhhhHHHHHHHHhhCCc
Confidence 0001 1123444556777 999998544333445566666644
|
This family consists of examples of ADP-heptose:LPS heptosyltransferase I, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria. |
| >PRK09814 beta-1,6-galactofuranosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=97.00 E-value=0.0052 Score=59.56 Aligned_cols=109 Identities=18% Similarity=0.356 Sum_probs=75.6
Q ss_pred CCCeEeecCccHHHhhhc--cCccceeecc--------Cc------hhHHHHHhhCCeEecCcccccchhhHHHHHHHhc
Q 042753 334 GRGYVIRGWSQQVAILRH--KAVGAFLTHC--------GW------NSVLEGVSAGVVMLTWPMDADQYTNAQLLVDQLG 397 (473)
Q Consensus 334 ~~nv~v~~~~pq~~lL~~--~~v~~~ItHg--------G~------~s~~eal~~GvP~l~~P~~~DQ~~na~rv~~~~G 397 (473)
.+|+...+|+|+.++..+ .+.+ +|.-+ .+ +-+.+.+++|+|+|+. ++...+..|++. +
T Consensus 206 ~~~V~f~G~~~~eel~~~l~~~~g-Lv~~~~~~~~~~~~y~~~~~P~K~~~ymA~G~PVI~~----~~~~~~~~V~~~-~ 279 (333)
T PRK09814 206 SANISYKGWFDPEELPNELSKGFG-LVWDGDTNDGEYGEYYKYNNPHKLSLYLAAGLPVIVW----SKAAIADFIVEN-G 279 (333)
T ss_pred CCCeEEecCCCHHHHHHHHhcCcC-eEEcCCCCCccchhhhhccchHHHHHHHHCCCCEEEC----CCccHHHHHHhC-C
Confidence 368888899998776432 1442 33221 11 1267789999999985 456788888855 9
Q ss_pred ceEEeccCCCCCCCHHHHHHHHHHHhCCc-HHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHH
Q 042753 398 VGIRVGEGTRNIPESDELARLLAQSVDGP-RRERLKARELSGAALSAVVKGGSSDRDLNDFIK 459 (473)
Q Consensus 398 ~G~~l~~~~~~~~~~~~l~~~i~~~l~~~-~~~~~~a~~~~~~~~~~~~~~gs~~~~~~~~~~ 459 (473)
+|+.++ +.+++.++++++..+. ..|++++++++++++ .|.-..+++++++.
T Consensus 280 ~G~~v~-------~~~el~~~l~~~~~~~~~~m~~n~~~~~~~~~----~g~~~~~~~~~~~~ 331 (333)
T PRK09814 280 LGFVVD-------SLEELPEIIDNITEEEYQEMVENVKKISKLLR----NGYFTKKALVDAIK 331 (333)
T ss_pred ceEEeC-------CHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHh----cchhHHHHHHHHHh
Confidence 999886 4678999998865433 578999999999994 56555555555543
|
|
| >PRK15490 Vi polysaccharide biosynthesis protein TviE; Provisional | Back alignment and domain information |
|---|
Probab=96.99 E-value=0.43 Score=48.79 Aligned_cols=113 Identities=17% Similarity=0.165 Sum_probs=65.5
Q ss_pred CCCeEeecCccH-HHhhhccCccceeec---cC-chhHHHHHhhCCeEecCcccccchhhHHHHHHHhcceEEeccCCCC
Q 042753 334 GRGYVIRGWSQQ-VAILRHKAVGAFLTH---CG-WNSVLEGVSAGVVMLTWPMDADQYTNAQLLVDQLGVGIRVGEGTRN 408 (473)
Q Consensus 334 ~~nv~v~~~~pq-~~lL~~~~v~~~ItH---gG-~~s~~eal~~GvP~l~~P~~~DQ~~na~rv~~~~G~G~~l~~~~~~ 408 (473)
.++|.+.+|..+ ..+|..+++ ||.. -| .+++.||+++|+|+|+... ..+...+.+. ..|..++ ..
T Consensus 454 ~d~V~FlG~~~Dv~~~LaaADV--fVlPS~~EGfp~vlLEAMA~GlPVVATdv----GG~~EiV~dG-~nG~LVp---~~ 523 (578)
T PRK15490 454 LERILFVGASRDVGYWLQKMNV--FILFSRYEGLPNVLIEAQMVGVPVISTPA----GGSAECFIEG-VSGFILD---DA 523 (578)
T ss_pred CCcEEECCChhhHHHHHHhCCE--EEEcccccCccHHHHHHHHhCCCEEEeCC----CCcHHHcccC-CcEEEEC---CC
Confidence 367888888654 347888997 7653 34 5699999999999998754 3455555533 5687777 32
Q ss_pred CCCHHHHHHHH---HHHhCCcHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHH
Q 042753 409 IPESDELARLL---AQSVDGPRRERLKARELSGAALSAVVKGGSSDRDLNDFIKRIN 462 (473)
Q Consensus 409 ~~~~~~l~~~i---~~~l~~~~~~~~~a~~~~~~~~~~~~~~gs~~~~~~~~~~~~~ 462 (473)
+.+.+.+++ .++.... +....+++..++.+...-|.+..+++.++-+.
T Consensus 524 --D~~aLa~ai~lA~aL~~ll----~~~~~mg~~ARe~V~e~FS~e~Mv~~y~ki~~ 574 (578)
T PRK15490 524 --QTVNLDQACRYAEKLVNLW----RSRTGICQQTQSFLQERFTVEHMVGTFVKTIA 574 (578)
T ss_pred --ChhhHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHH
Confidence 344454444 2222221 11112333333333344566666666666543
|
|
| >PF13692 Glyco_trans_1_4: Glycosyl transferases group 1; PDB: 3OY2_A 3OY7_B 2Q6V_A 2HY7_A 3CV3_A 3CUY_A | Back alignment and domain information |
|---|
Probab=96.94 E-value=0.0037 Score=51.54 Aligned_cols=127 Identities=17% Similarity=0.228 Sum_probs=66.6
Q ss_pred EEEEEeCCccc-CCHHHHHH-HHHHHHhCCCcEEEEEeCCCccCCcccCCCCchhhHHhhcCCCeEeecCccH-HHhhhc
Q 042753 275 VVYVCFGSRYV-LTAKQIHE-LAAALEKTDVDFVYCVREPDERHASQDCGVLPDGFEDRVAGRGYVIRGWSQQ-VAILRH 351 (473)
Q Consensus 275 ~V~vs~Gs~~~-~~~~~~~~-~~~al~~~~~~~i~~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~v~~~~pq-~~lL~~ 351 (473)
+.++++|+... ...+.+.+ ++..+.+...++-+.+-+.. |+.+.+. ..+|+...+|++. .++++.
T Consensus 3 ~~i~~~g~~~~~k~~~~li~~~~~~l~~~~p~~~l~i~G~~-----------~~~l~~~-~~~~v~~~g~~~e~~~~l~~ 70 (135)
T PF13692_consen 3 LYIGYLGRIRPDKGLEELIEAALERLKEKHPDIELIIIGNG-----------PDELKRL-RRPNVRFHGFVEELPEILAA 70 (135)
T ss_dssp EEEE--S-SSGGGTHHHHHH-HHHHHHHHSTTEEEEEECES-----------S-HHCCH-HHCTEEEE-S-HHHHHHHHC
T ss_pred ccccccccccccccccchhhhHHHHHHHHCcCEEEEEEeCC-----------HHHHHHh-cCCCEEEcCCHHHHHHHHHh
Confidence 45566666653 34444444 66666543233333333221 1122222 2358898899864 347888
Q ss_pred cCccceeec---cCchhHHHHHhhCCeEecCcccccchhhHHHHHHHhcceEEeccCCCCCCCHHHHHHHHHHHhCC
Q 042753 352 KAVGAFLTH---CGWNSVLEGVSAGVVMLTWPMDADQYTNAQLLVDQLGVGIRVGEGTRNIPESDELARLLAQSVDG 425 (473)
Q Consensus 352 ~~v~~~ItH---gG~~s~~eal~~GvP~l~~P~~~DQ~~na~rv~~~~G~G~~l~~~~~~~~~~~~l~~~i~~~l~~ 425 (473)
+++....+. |-.+++.|++++|+|+|+.+.. ....++ ..+.|..+. -+.+++.++|.++++|
T Consensus 71 ~dv~l~p~~~~~~~~~k~~e~~~~G~pvi~~~~~-----~~~~~~-~~~~~~~~~------~~~~~l~~~i~~l~~d 135 (135)
T PF13692_consen 71 ADVGLIPSRFNEGFPNKLLEAMAAGKPVIASDNG-----AEGIVE-EDGCGVLVA------NDPEELAEAIERLLND 135 (135)
T ss_dssp -SEEEE-BSS-SCC-HHHHHHHCTT--EEEEHHH-----CHCHS----SEEEE-T------T-HHHHHHHHHHHHH-
T ss_pred CCEEEEEeeCCCcCcHHHHHHHHhCCCEEECCcc-----hhhhee-ecCCeEEEC------CCHHHHHHHHHHHhcC
Confidence 998544332 2348999999999999998761 222233 237776664 3899999999999875
|
|
| >COG1817 Uncharacterized protein conserved in archaea [Function unknown] | Back alignment and domain information |
|---|
Probab=96.88 E-value=0.11 Score=48.09 Aligned_cols=102 Identities=18% Similarity=0.180 Sum_probs=70.3
Q ss_pred CCCChHHHHHHHHHHHhCCCeEEEEeCCCC--hhhhhhhccCCCCCCeeEEEcCCCCCCCCCChhhHH-HHHHHHHHHhh
Q 042753 15 TSGHIIPLLDLTNRLLTLGLNVTVLITQNN--LPLLDSLNANHPSTSLQSLVLPQPKWPAGSPATRLL-KFMRVLRELHY 91 (473)
Q Consensus 15 ~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~--~~~i~~~~~~~~~~~~~f~~l~~~~~~~~~~~~~~~-~~~~~~~~~~~ 91 (473)
-.-|+.-+..+.++|.++||+|.+.+-... .+.++.+ |+.+..+.-. +. ..+. .+.... ...
T Consensus 9 n~~hvhfFk~lI~elekkG~ev~iT~rd~~~v~~LLd~y-------gf~~~~Igk~---g~---~tl~~Kl~~~~--eR~ 73 (346)
T COG1817 9 NPPHVHFFKNLIWELEKKGHEVLITCRDFGVVTELLDLY-------GFPYKSIGKH---GG---VTLKEKLLESA--ERV 73 (346)
T ss_pred CcchhhHHHHHHHHHHhCCeEEEEEEeecCcHHHHHHHh-------CCCeEeeccc---CC---ccHHHHHHHHH--HHH
Confidence 345788899999999999999988887532 3444544 6766665421 10 1111 121111 223
Q ss_pred HHHHHHHhcCCCCCcEEEeCCCcchHHHHHHHhCCCcEEEecc
Q 042753 92 PALLDWFKSHPSPPVAILSDFFLGWTQGLAAELGLPRVVFSPS 134 (473)
Q Consensus 92 ~~l~~~l~~~~~~pD~VV~D~~~~~~~~~A~~~giP~v~~~~~ 134 (473)
-.|.+++.+. +||+.+. ...+....+|--+|+|.|.+.-.
T Consensus 74 ~~L~ki~~~~--kpdv~i~-~~s~~l~rvafgLg~psIi~~D~ 113 (346)
T COG1817 74 YKLSKIIAEF--KPDVAIG-KHSPELPRVAFGLGIPSIIFVDN 113 (346)
T ss_pred HHHHHHHhhc--CCceEee-cCCcchhhHHhhcCCceEEecCC
Confidence 4678899999 9999999 56678999999999999998544
|
|
| >PF13477 Glyco_trans_4_2: Glycosyl transferase 4-like | Back alignment and domain information |
|---|
Probab=96.84 E-value=0.012 Score=48.75 Aligned_cols=102 Identities=17% Similarity=0.235 Sum_probs=66.5
Q ss_pred EEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCCCChhhhhhhccCCCCCCeeEEEcCCCCCCCCCChhhHHHHHHHH
Q 042753 7 HILVYPFPTSGHIIPLLDLTNRLLTLGLNVTVLITQNNLPLLDSLNANHPSTSLQSLVLPQPKWPAGSPATRLLKFMRVL 86 (473)
Q Consensus 7 ~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~i~~~~~~~~~~~~~f~~l~~~~~~~~~~~~~~~~~~~~~ 86 (473)
|||++.-....| ...+++.|.++||+|++++........... .++.+..++.+. ... ..+ .
T Consensus 1 KIl~i~~~~~~~---~~~~~~~L~~~g~~V~ii~~~~~~~~~~~~------~~i~~~~~~~~~------k~~-~~~---~ 61 (139)
T PF13477_consen 1 KILLIGNTPSTF---IYNLAKELKKRGYDVHIITPRNDYEKYEII------EGIKVIRLPSPR------KSP-LNY---I 61 (139)
T ss_pred CEEEEecCcHHH---HHHHHHHHHHCCCEEEEEEcCCCchhhhHh------CCeEEEEecCCC------Ccc-HHH---H
Confidence 577777555555 567899999999999999996554332222 367787775321 011 111 1
Q ss_pred HHHhhHHHHHHHhcCCCCCcEEEeCCCcc---hHHHHHHHhC-CCcEEEe
Q 042753 87 RELHYPALLDWFKSHPSPPVAILSDFFLG---WTQGLAAELG-LPRVVFS 132 (473)
Q Consensus 87 ~~~~~~~l~~~l~~~~~~pD~VV~D~~~~---~~~~~A~~~g-iP~v~~~ 132 (473)
. . -.+.+++++. +||+|.+-.... .+..++...+ +|+|...
T Consensus 62 ~--~-~~l~k~ik~~--~~DvIh~h~~~~~~~~~~l~~~~~~~~~~i~~~ 106 (139)
T PF13477_consen 62 K--Y-FRLRKIIKKE--KPDVIHCHTPSPYGLFAMLAKKLLKNKKVIYTV 106 (139)
T ss_pred H--H-HHHHHHhccC--CCCEEEEecCChHHHHHHHHHHHcCCCCEEEEe
Confidence 1 1 2678899999 999998777654 2334567778 8988643
|
|
| >PRK10017 colanic acid biosynthesis protein; Provisional | Back alignment and domain information |
|---|
Probab=96.83 E-value=0.053 Score=54.04 Aligned_cols=182 Identities=13% Similarity=0.131 Sum_probs=104.2
Q ss_pred hHHHhcCCCCCcEEEEEeCCcccC------C----HHHHHHHHHHHHhCCCcEEEEEeCCCccCCcccCC--CCchhhHH
Q 042753 263 VLTWLDSRRDESVVYVCFGSRYVL------T----AKQIHELAAALEKTDVDFVYCVREPDERHASQDCG--VLPDGFED 330 (473)
Q Consensus 263 ~~~~l~~~~~~~~V~vs~Gs~~~~------~----~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~--~lp~~~~~ 330 (473)
+..|+.....+++|.||.-..... . ...+.++++.|.+.++++++..-....+ ....+ .+-..+.+
T Consensus 224 ~~~~~~~~~~~~~Vgisvr~~~~~~~~~~~~~~~Y~~~la~~i~~Li~~g~~Vv~lp~~~~~~--~~~~dD~~~~~~l~~ 301 (426)
T PRK10017 224 VQHWLDVAAQQKTVAITLRELAPFDKRLGTTQQAYEKAFAGVVNRIIDEGYQVIALSTCTGID--SYNKDDRMVALNLRQ 301 (426)
T ss_pred hhhhhcccccCCEEEEEecccccccccccccHHHHHHHHHHHHHHHHHCCCeEEEEecccCcc--CCCCchHHHHHHHHH
Confidence 344554434567888886654311 1 2334456666656688877665431100 00001 01123444
Q ss_pred hhcCC-C--eEeecCccH--HHhhhccCccceeeccCchhHHHHHhhCCeEecCcccccchhhHHHHHHHhcceEE-ecc
Q 042753 331 RVAGR-G--YVIRGWSQQ--VAILRHKAVGAFLTHCGWNSVLEGVSAGVVMLTWPMDADQYTNAQLLVDQLGVGIR-VGE 404 (473)
Q Consensus 331 ~~~~~-n--v~v~~~~pq--~~lL~~~~v~~~ItHgG~~s~~eal~~GvP~l~~P~~~DQ~~na~rv~~~~G~G~~-l~~ 404 (473)
++..+ + ++..++-|. ..+++++++ +|. .=+=+..-|+..|||.+.+++ | +.....+. .+|..-. .+
T Consensus 302 ~~~~~~~~~vi~~~~~~~e~~~iIs~~dl--~ig-~RlHa~I~a~~~gvP~i~i~Y--~-~K~~~~~~-~lg~~~~~~~- 373 (426)
T PRK10017 302 HVSDPARYHVVMDELNDLEMGKILGACEL--TVG-TRLHSAIISMNFGTPAIAINY--E-HKSAGIMQ-QLGLPEMAID- 373 (426)
T ss_pred hcccccceeEecCCCChHHHHHHHhhCCE--EEE-ecchHHHHHHHcCCCEEEeee--h-HHHHHHHH-HcCCccEEec-
Confidence 44322 2 223233343 368888885 553 223357778899999999987 3 44444455 6688766 56
Q ss_pred CCCCCCCHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHH
Q 042753 405 GTRNIPESDELARLLAQSVDGPRRERLKARELSGAALSAVVKGGSSDRDLNDFIKRIN 462 (473)
Q Consensus 405 ~~~~~~~~~~l~~~i~~~l~~~~~~~~~a~~~~~~~~~~~~~~gs~~~~~~~~~~~~~ 462 (473)
...++.++|.+.++++++|.+.+++..++--+.+++. ..+.+.++++.+.
T Consensus 374 --~~~l~~~~Li~~v~~~~~~r~~~~~~l~~~v~~~r~~------~~~~~~~~~~~~~ 423 (426)
T PRK10017 374 --IRHLLDGSLQAMVADTLGQLPALNARLAEAVSRERQT------GMQMVQSVLERIG 423 (426)
T ss_pred --hhhCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHH------HHHHHHHHHHHhc
Confidence 7889999999999999998756666665555555421 3344455555443
|
|
| >cd01635 Glycosyltransferase_GTB_type Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds | Back alignment and domain information |
|---|
Probab=96.79 E-value=0.27 Score=43.85 Aligned_cols=69 Identities=26% Similarity=0.273 Sum_probs=50.3
Q ss_pred CCCChHHHHHHHHHHHhCCCeEEEEeCCCChhhhhhhccCCCCCCeeEEEcCCCCCCCCCChhhHHHHHHHHHHHhhHHH
Q 042753 15 TSGHIIPLLDLTNRLLTLGLNVTVLITQNNLPLLDSLNANHPSTSLQSLVLPQPKWPAGSPATRLLKFMRVLRELHYPAL 94 (473)
Q Consensus 15 ~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~i~~~~~~~~~~~~~f~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 94 (473)
..|+-.....+++.|.++||+|+++. .....+
T Consensus 12 ~~G~~~~~~~l~~~L~~~g~~v~v~~------------------------------------------------~~~~~~ 43 (229)
T cd01635 12 GGGVELVLLDLAKALARRGHEVEVVA------------------------------------------------LLLLLL 43 (229)
T ss_pred CCCchhHHHHHHHHHHHcCCeEEEEE------------------------------------------------echHHH
Confidence 66999999999999999999999998 001112
Q ss_pred HHHHhcCCCCCcEEEeCCCcchHH---HHHHHhCCCcEEEec
Q 042753 95 LDWFKSHPSPPVAILSDFFLGWTQ---GLAAELGLPRVVFSP 133 (473)
Q Consensus 95 ~~~l~~~~~~pD~VV~D~~~~~~~---~~A~~~giP~v~~~~ 133 (473)
...+.+. +||+|++........ ..+...++|++....
T Consensus 44 ~~~~~~~--~~D~i~~~~~~~~~~~~~~~~~~~~~~~i~~~h 83 (229)
T cd01635 44 LRILRGF--KPDVVHAHGYYPAPLALLLAARLLGIPLVLTVH 83 (229)
T ss_pred HHHHhhc--CCCEEEEcCCCcHHHHHHHHHhhCCCCEEEEEc
Confidence 2334456 899999887766433 457778999877533
|
The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. |
| >PRK10422 lipopolysaccharide core biosynthesis protein; Provisional | Back alignment and domain information |
|---|
Probab=96.67 E-value=0.13 Score=50.21 Aligned_cols=110 Identities=15% Similarity=0.109 Sum_probs=73.5
Q ss_pred CCCCccEEEEEcCCCCCChHHHHHHHHHHHhC--CCeEEEEeCCCChhhhhhhccCCCCCCee-EEEcCCCCCCCCCChh
Q 042753 1 MLPAGAHILVYPFPTSGHIIPLLDLTNRLLTL--GLNVTVLITQNNLPLLDSLNANHPSTSLQ-SLVLPQPKWPAGSPAT 77 (473)
Q Consensus 1 ~~~~~~~Il~~~~~~~GH~~p~l~La~~L~~r--Gh~Vt~~~~~~~~~~i~~~~~~~~~~~~~-f~~l~~~~~~~~~~~~ 77 (473)
|...++|||++-....|++.-+.++.+.|.++ +.+|++++.+.+.+.++.. +.++ ++.++.. . ..
T Consensus 1 ~~~~~~~ILii~~~~iGD~vl~~P~l~~Lk~~~P~a~I~~l~~~~~~~l~~~~------P~id~vi~~~~~--~----~~ 68 (352)
T PRK10422 1 MDKPFRRILIIKMRFHGDMLLTTPVISSLKKNYPDAKIDVLLYQDTIPILSEN------PEINALYGIKNK--K----AG 68 (352)
T ss_pred CCCCCceEEEEEecccCceeeHHHHHHHHHHHCCCCeEEEEeccChHHHhccC------CCceEEEEeccc--c----cc
Confidence 66778999999999999999999999999997 9999999999887766644 3443 2223310 0 00
Q ss_pred hHHHHHHHHHHHhhHHHHHHHhcCCCCCcEEEeCCCcchHHHHHHHhCCCcEE
Q 042753 78 RLLKFMRVLRELHYPALLDWFKSHPSPPVAILSDFFLGWTQGLAAELGLPRVV 130 (473)
Q Consensus 78 ~~~~~~~~~~~~~~~~l~~~l~~~~~~pD~VV~D~~~~~~~~~A~~~giP~v~ 130 (473)
....+ . . .-.+.+.++.. ++|++|.=........++...|.|...
T Consensus 69 ~~~~~----~-~-~~~l~~~lr~~--~yD~vidl~~~~~s~ll~~l~~a~~ri 113 (352)
T PRK10422 69 ASEKI----K-N-FFSLIKVLRAN--KYDLIVNLTDQWMVALLVRLLNARVKI 113 (352)
T ss_pred HHHHH----H-H-HHHHHHHHhhC--CCCEEEEcccchHHHHHHHHhCCCeEE
Confidence 00011 1 0 11233456667 999999655444455667777877655
|
|
| >PF06722 DUF1205: Protein of unknown function (DUF1205); InterPro: IPR010610 This entry represents a conserved region of unknown function within bacterial glycosyl transferases | Back alignment and domain information |
|---|
Probab=96.52 E-value=0.0037 Score=47.98 Aligned_cols=55 Identities=22% Similarity=0.291 Sum_probs=45.8
Q ss_pred ChhhhHHHhcCCCCCcEEEEEeCCcccC---CH--HHHHHHHHHHHhCCCcEEEEEeCCC
Q 042753 259 PAHDVLTWLDSRRDESVVYVCFGSRYVL---TA--KQIHELAAALEKTDVDFVYCVREPD 313 (473)
Q Consensus 259 ~~~~~~~~l~~~~~~~~V~vs~Gs~~~~---~~--~~~~~~~~al~~~~~~~i~~~~~~~ 313 (473)
.+..+..|+...+++|.|+||+||.... .. ..+..++++++..+..+|..+....
T Consensus 26 G~~~~P~Wl~~~~~RpRVcvT~G~~~~~~~g~~~~~~l~~ll~ala~ldvEvV~a~~~~~ 85 (97)
T PF06722_consen 26 GPAVVPDWLLEPPGRPRVCVTLGTSVRMFFGPGGVPLLRRLLEALAGLDVEVVVALPAAQ 85 (97)
T ss_dssp SSEEEEGGGSSSTSSEEEEEEETHHHCHHHSCHHHCHHHHHHHHHHTSSSEEEEEETTCC
T ss_pred CCCCCCcccccCCCCCEEEEEcCCCccccccccchHHHHHHHHHHhhCCcEEEEECCHHH
Confidence 3456677998888999999999999653 22 4788999999999999999999864
|
Many proteins containing this domain are members of the glycosyl transferase family 28 IPR004276 from INTERPRO.; PDB: 3OTH_A 3OTG_A 3OTI_A 3D0R_A 3D0Q_B 2P6P_A 3UYK_A 3UYL_B 3TSA_B 2YJN_A. |
| >TIGR02201 heptsyl_trn_III lipopolysaccharide heptosyltransferase III, putative | Back alignment and domain information |
|---|
Probab=96.32 E-value=0.62 Score=45.29 Aligned_cols=105 Identities=15% Similarity=0.135 Sum_probs=70.4
Q ss_pred EEEEEcCCCCCChHHHHHHHHHHHhC--CCeEEEEeCCCChhhhhhhccCCCCCCee-EEEcCCCCCCCCCChhhHHHHH
Q 042753 7 HILVYPFPTSGHIIPLLDLTNRLLTL--GLNVTVLITQNNLPLLDSLNANHPSTSLQ-SLVLPQPKWPAGSPATRLLKFM 83 (473)
Q Consensus 7 ~Il~~~~~~~GH~~p~l~La~~L~~r--Gh~Vt~~~~~~~~~~i~~~~~~~~~~~~~-f~~l~~~~~~~~~~~~~~~~~~ 83 (473)
|||++-..+.|++.-+.++.+.|.++ +.+|++++.+.+.+.++.. +.++ ++.++... . . .....+.
T Consensus 1 rILii~~~~iGD~vl~tp~l~~Lk~~~P~a~I~~l~~~~~~~l~~~~------p~vd~vi~~~~~~--~-~--~~~~~~~ 69 (344)
T TIGR02201 1 RILLIKLRHHGDMLLTTPVISSLKKNYPDAKIDVLLYQETIPILSEN------PDINALYGLDRKK--A-K--AGERKLA 69 (344)
T ss_pred CEEEEEeccccceeeHHHHHHHHHHHCCCCEEEEEECcChHHHHhcC------CCccEEEEeChhh--h-c--chHHHHH
Confidence 68999999999999999999999996 8999999999887776654 3453 33333110 0 0 0001111
Q ss_pred HHHHHHhhHHHHHHHhcCCCCCcEEEeCCCcchHHHHHHHhCCCcEE
Q 042753 84 RVLRELHYPALLDWFKSHPSPPVAILSDFFLGWTQGLAAELGLPRVV 130 (473)
Q Consensus 84 ~~~~~~~~~~l~~~l~~~~~~pD~VV~D~~~~~~~~~A~~~giP~v~ 130 (473)
. . -.+...++.. ++|++|.=.....+..++...|+|.-.
T Consensus 70 ~-----~-~~l~~~lr~~--~yD~vidl~~~~~s~ll~~l~~a~~ri 108 (344)
T TIGR02201 70 N-----Q-FHLIKVLRAN--RYDLVVNLTDQWMVAILVKLLNARVKI 108 (344)
T ss_pred H-----H-HHHHHHHHhC--CCCEEEECCcchHHHHHHHhcCCCeEE
Confidence 1 1 1233446667 999999655445567788888988655
|
This family consists of examples of the putative ADP-heptose:LPS heptosyltransferase III, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria. This enzyme may be less widely distributed than heptosyltransferases I and II. |
| >PF13579 Glyco_trans_4_4: Glycosyl transferase 4-like domain; PDB: 3C4Q_B 3C4V_A 3C48_B 1Z2T_A | Back alignment and domain information |
|---|
Probab=96.28 E-value=0.0089 Score=50.41 Aligned_cols=95 Identities=24% Similarity=0.288 Sum_probs=48.2
Q ss_pred HHHHHHHHHHhCCCeEEEEeCCCChhhhhhhccCCCCCCeeEEEcCCCCCCCCCChhhHHHHHHHHHHHhhHHHHHHH--
Q 042753 21 PLLDLTNRLLTLGLNVTVLITQNNLPLLDSLNANHPSTSLQSLVLPQPKWPAGSPATRLLKFMRVLRELHYPALLDWF-- 98 (473)
Q Consensus 21 p~l~La~~L~~rGh~Vt~~~~~~~~~~i~~~~~~~~~~~~~f~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l-- 98 (473)
-+..|+++|.++||+|++++.......-+.. ..++.+..++.+.... ......+ ...+.+++
T Consensus 6 ~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~---~~~~~~~--------~~~~~~~l~~ 69 (160)
T PF13579_consen 6 YVRELARALAARGHEVTVVTPQPDPEDDEEE-----EDGVRVHRLPLPRRPW---PLRLLRF--------LRRLRRLLAA 69 (160)
T ss_dssp HHHHHHHHHHHTT-EEEEEEE---GGG-SEE-----ETTEEEEEE--S-SSS---GGGHCCH--------HHHHHHHCHH
T ss_pred HHHHHHHHHHHCCCEEEEEecCCCCcccccc-----cCCceEEeccCCccch---hhhhHHH--------HHHHHHHHhh
Confidence 4678999999999999999986554422111 1367777777543211 0000011 13334445
Q ss_pred hcCCCCCcEEEeCCCcc-hHHHHHH-HhCCCcEEEec
Q 042753 99 KSHPSPPVAILSDFFLG-WTQGLAA-ELGLPRVVFSP 133 (473)
Q Consensus 99 ~~~~~~pD~VV~D~~~~-~~~~~A~-~~giP~v~~~~ 133 (473)
+.. +||+|.+..... ....+++ ..++|+|....
T Consensus 70 ~~~--~~Dvv~~~~~~~~~~~~~~~~~~~~p~v~~~h 104 (160)
T PF13579_consen 70 RRE--RPDVVHAHSPTAGLVAALARRRRGIPLVVTVH 104 (160)
T ss_dssp CT-----SEEEEEHHHHHHHHHHHHHHHT--EEEE-S
T ss_pred hcc--CCeEEEecccchhHHHHHHHHccCCcEEEEEC
Confidence 566 999999887433 2334445 78999988543
|
|
| >COG0859 RfaF ADP-heptose:LPS heptosyltransferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=96.18 E-value=1.2 Score=43.22 Aligned_cols=105 Identities=22% Similarity=0.227 Sum_probs=73.3
Q ss_pred ccEEEEEcCCCCCChHHHHHHHHHHHhC--CCeEEEEeCCCChhhhhhhccCCCCCCeeEEEcCCCCCCCCCChhhHHHH
Q 042753 5 GAHILVYPFPTSGHIIPLLDLTNRLLTL--GLNVTVLITQNNLPLLDSLNANHPSTSLQSLVLPQPKWPAGSPATRLLKF 82 (473)
Q Consensus 5 ~~~Il~~~~~~~GH~~p~l~La~~L~~r--Gh~Vt~~~~~~~~~~i~~~~~~~~~~~~~f~~l~~~~~~~~~~~~~~~~~ 82 (473)
|+||+++-....|++.-.+++.+.|+++ +.++++++...+.+.++.. +.++-+..-... ... ..+
T Consensus 1 ~~kIliir~~~iGD~vlt~p~~~~lk~~~P~a~i~~~~~~~~~~i~~~~------p~I~~vi~~~~~------~~~-~~~ 67 (334)
T COG0859 1 MMKILVIRLSKLGDVVLTLPLLRTLKKAYPNAKIDVLVPKGFAPILKLN------PEIDKVIIIDKK------KKG-LGL 67 (334)
T ss_pred CceEEEEeccchhHHHhHHHHHHHHHHHCCCCEEEEEeccchHHHHhcC------hHhhhhcccccc------ccc-cch
Confidence 6899999999999999999999999998 6999999999887666644 233222110000 000 001
Q ss_pred HHHHHHHhhHHHHHHHhcCCCCCcEEEeCCCcchHHHHHHHhCCCcEE
Q 042753 83 MRVLRELHYPALLDWFKSHPSPPVAILSDFFLGWTQGLAAELGLPRVV 130 (473)
Q Consensus 83 ~~~~~~~~~~~l~~~l~~~~~~pD~VV~D~~~~~~~~~A~~~giP~v~ 130 (473)
.-...+.+.++.. ++|+||.=.-..-...++...++|.-.
T Consensus 68 ------~~~~~l~~~lr~~--~yD~vidl~~~~ksa~l~~~~~~~~r~ 107 (334)
T COG0859 68 ------KERLALLRTLRKE--RYDAVIDLQGLLKSALLALLLGIPFRI 107 (334)
T ss_pred ------HHHHHHHHHhhcc--CCCEEEECcccHHHHHHHHHhCCCccc
Confidence 1223455667777 899999877777777778788888755
|
|
| >PRK10916 ADP-heptose:LPS heptosyltransferase II; Provisional | Back alignment and domain information |
|---|
Probab=95.99 E-value=1.7 Score=42.33 Aligned_cols=103 Identities=15% Similarity=0.026 Sum_probs=70.5
Q ss_pred cEEEEEcCCCCCChHHHHHHHHHHHhC--CCeEEEEeCCCChhhhhhhccCCCCCCeeEE-EcCCCCCCCCCChhhHHHH
Q 042753 6 AHILVYPFPTSGHIIPLLDLTNRLLTL--GLNVTVLITQNNLPLLDSLNANHPSTSLQSL-VLPQPKWPAGSPATRLLKF 82 (473)
Q Consensus 6 ~~Il~~~~~~~GH~~p~l~La~~L~~r--Gh~Vt~~~~~~~~~~i~~~~~~~~~~~~~f~-~l~~~~~~~~~~~~~~~~~ 82 (473)
+|||++-..+.|++.-..++.+.|+++ +.+|++++.+.+.+.++.. +.++-+ .++.. .....+
T Consensus 1 mrILii~~~~iGD~il~tP~l~~Lk~~~P~a~I~~l~~~~~~~l~~~~------P~vd~vi~~~~~--------~~~~~~ 66 (348)
T PRK10916 1 MKILVIGPSWVGDMMMSQSLYRTLKARYPQAIIDVMAPAWCRPLLSRM------PEVNEAIPMPLG--------HGALEI 66 (348)
T ss_pred CcEEEEccCcccHHHhHHHHHHHHHHHCCCCeEEEEechhhHHHHhcC------CccCEEEecccc--------cchhhh
Confidence 489999999999999999999999996 9999999998887777655 445432 22210 000011
Q ss_pred HHHHHHHhhHHHHHHHhcCCCCCcEEEeCCCcchHHHHHHHhCCCcEE
Q 042753 83 MRVLRELHYPALLDWFKSHPSPPVAILSDFFLGWTQGLAAELGLPRVV 130 (473)
Q Consensus 83 ~~~~~~~~~~~l~~~l~~~~~~pD~VV~D~~~~~~~~~A~~~giP~v~ 130 (473)
. ....+.+.++.. ++|++|.=........++...|+|.-.
T Consensus 67 ~------~~~~l~~~lr~~--~yD~vidl~~~~~s~~l~~~~~~~~ri 106 (348)
T PRK10916 67 G------ERRRLGHSLREK--RYDRAYVLPNSFKSALVPFFAGIPHRT 106 (348)
T ss_pred H------HHHHHHHHHHhc--CCCEEEECCCcHHHHHHHHHcCCCeEe
Confidence 0 012334557777 999999765445566777777887654
|
|
| >PHA01633 putative glycosyl transferase group 1 | Back alignment and domain information |
|---|
Probab=95.94 E-value=0.48 Score=45.59 Aligned_cols=85 Identities=13% Similarity=0.082 Sum_probs=54.0
Q ss_pred CCCeEee---cCccHH---HhhhccCccceeec----cCchhHHHHHhhCCeEecCcc------cccc------hhhHHH
Q 042753 334 GRGYVIR---GWSQQV---AILRHKAVGAFLTH----CGWNSVLEGVSAGVVMLTWPM------DADQ------YTNAQL 391 (473)
Q Consensus 334 ~~nv~v~---~~~pq~---~lL~~~~v~~~ItH----gG~~s~~eal~~GvP~l~~P~------~~DQ------~~na~r 391 (473)
..++... +++++. ++++.+++ ||.- |=..+++||+++|+|+|+--. .+|+ .++..-
T Consensus 200 ~~~V~f~g~~G~~~~~dl~~~y~~aDi--fV~PS~~EgfGlvlLEAMA~G~PVVas~~~~l~Ei~g~~~~~Li~~~~v~~ 277 (335)
T PHA01633 200 PANVHFVAEFGHNSREYIFAFYGAMDF--TIVPSGTEGFGMPVLESMAMGTPVIHQLMPPLDEFTSWQWNLLIKSSKVEE 277 (335)
T ss_pred CCcEEEEecCCCCCHHHHHHHHHhCCE--EEECCccccCCHHHHHHHHcCCCEEEccCCCceeecCCccceeeCCCCHHH
Confidence 3567665 455554 56788887 6653 335578999999999998633 2232 222222
Q ss_pred HHH-HhcceEEeccCCCCCCCHHHHHHHHHHHhCC
Q 042753 392 LVD-QLGVGIRVGEGTRNIPESDELARLLAQSVDG 425 (473)
Q Consensus 392 v~~-~~G~G~~l~~~~~~~~~~~~l~~~i~~~l~~ 425 (473)
..+ ..|.|..++ ..+++++.++|.+++..
T Consensus 278 ~~~~~~g~g~~~~-----~~d~~~la~ai~~~~~~ 307 (335)
T PHA01633 278 YYDKEHGQKWKIH-----KFQIEDMANAIILAFEL 307 (335)
T ss_pred hcCcccCceeeec-----CCCHHHHHHHHHHHHhc
Confidence 221 125665554 68999999999999543
|
|
| >COG3914 Spy Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=95.69 E-value=0.085 Score=52.89 Aligned_cols=133 Identities=14% Similarity=0.199 Sum_probs=90.0
Q ss_pred CCCcEEEEEeCCcccCCHHHHHHHHHHHHhCCCcEEEEEeCCCccCCcccCCCCchhhHHhhc-----CCCeEeecCccH
Q 042753 271 RDESVVYVCFGSRYVLTAKQIHELAAALEKTDVDFVYCVREPDERHASQDCGVLPDGFEDRVA-----GRGYVIRGWSQQ 345 (473)
Q Consensus 271 ~~~~~V~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~lp~~~~~~~~-----~~nv~v~~~~pq 345 (473)
++..+||+||+..+...++.+..-++-|+..+--++|...++. + +.+-+.+++... ...+++.+-.|.
T Consensus 427 p~~avVf~c~~n~~K~~pev~~~wmqIL~~vP~Svl~L~~~~~----~---~~~~~~l~~la~~~Gv~~eRL~f~p~~~~ 499 (620)
T COG3914 427 PEDAVVFCCFNNYFKITPEVFALWMQILSAVPNSVLLLKAGGD----D---AEINARLRDLAEREGVDSERLRFLPPAPN 499 (620)
T ss_pred CCCeEEEEecCCcccCCHHHHHHHHHHHHhCCCcEEEEecCCC----c---HHHHHHHHHHHHHcCCChhheeecCCCCC
Confidence 4678999999999999999999999999999999999998842 1 223233333322 334566666665
Q ss_pred HH---hhhccCcccee---eccCchhHHHHHhhCCeEecCcccccchh--hHHHHHHHhcceEEeccCCCCCCCHHHHHH
Q 042753 346 VA---ILRHKAVGAFL---THCGWNSVLEGVSAGVVMLTWPMDADQYT--NAQLLVDQLGVGIRVGEGTRNIPESDELAR 417 (473)
Q Consensus 346 ~~---lL~~~~v~~~I---tHgG~~s~~eal~~GvP~l~~P~~~DQ~~--na~rv~~~~G~G~~l~~~~~~~~~~~~l~~ 417 (473)
.+ =+..+++ |+ -=||..|+.|+|+.|||+|..+ ++|+. |+.-+...+|+-..+- .-.++-+.+
T Consensus 500 ~~h~a~~~iADl--vLDTyPY~g~TTa~daLwm~vPVlT~~--G~~FasR~~~si~~~agi~e~vA-----~s~~dYV~~ 570 (620)
T COG3914 500 EDHRARYGIADL--VLDTYPYGGHTTASDALWMGVPVLTRV--GEQFASRNGASIATNAGIPELVA-----DSRADYVEK 570 (620)
T ss_pred HHHHHhhchhhe--eeecccCCCccchHHHHHhcCceeeec--cHHHHHhhhHHHHHhcCCchhhc-----CCHHHHHHH
Confidence 43 3334564 54 3599999999999999999986 77763 4444543444433333 334556666
Q ss_pred HH
Q 042753 418 LL 419 (473)
Q Consensus 418 ~i 419 (473)
++
T Consensus 571 av 572 (620)
T COG3914 571 AV 572 (620)
T ss_pred HH
Confidence 65
|
|
| >KOG4626 consensus O-linked N-acetylglucosamine transferase OGT [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=95.61 E-value=0.17 Score=51.15 Aligned_cols=123 Identities=19% Similarity=0.291 Sum_probs=82.0
Q ss_pred CCCcEEEEEeCCcccCCHHHHHHHHHHHHhCCCcEEEEEeCCCccCCcccCCCCchhhHH---h--hcCCCeEeecCccH
Q 042753 271 RDESVVYVCFGSRYVLTAKQIHELAAALEKTDVDFVYCVREPDERHASQDCGVLPDGFED---R--VAGRGYVIRGWSQQ 345 (473)
Q Consensus 271 ~~~~~V~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~lp~~~~~---~--~~~~nv~v~~~~pq 345 (473)
++..+||++|--....+++.++.-..-|++-+.-++|..+.+.++ + ..|.. + +.++.++..+-++-
T Consensus 756 p~d~vvf~~FNqLyKidP~~l~~W~~ILk~VPnS~LwllrfPa~g------e---~rf~ty~~~~Gl~p~riifs~va~k 826 (966)
T KOG4626|consen 756 PEDAVVFCNFNQLYKIDPSTLQMWANILKRVPNSVLWLLRFPAVG------E---QRFRTYAEQLGLEPDRIIFSPVAAK 826 (966)
T ss_pred CCCeEEEeechhhhcCCHHHHHHHHHHHHhCCcceeEEEeccccc------h---HHHHHHHHHhCCCccceeeccccch
Confidence 357799999999888999999999999999999999999987532 1 12211 1 11334554444443
Q ss_pred HH-----hhhccCccceeeccCchhHHHHHhhCCeEecCcccccchhhHHHHHHHhcceEEec
Q 042753 346 VA-----ILRHKAVGAFLTHCGWNSVLEGVSAGVVMLTWPMDADQYTNAQLLVDQLGVGIRVG 403 (473)
Q Consensus 346 ~~-----lL~~~~v~~~ItHgG~~s~~eal~~GvP~l~~P~~~DQ~~na~rv~~~~G~G~~l~ 403 (473)
.+ .|..-.+.-+.+. |..|.++.|+.|||||.+|...---..|.-.--.+|+|..+.
T Consensus 827 ~eHvrr~~LaDv~LDTplcn-GhTTg~dvLw~GvPmVTmpge~lAsrVa~Sll~~~Gl~hlia 888 (966)
T KOG4626|consen 827 EEHVRRGQLADVCLDTPLCN-GHTTGMDVLWAGVPMVTMPGETLASRVAASLLTALGLGHLIA 888 (966)
T ss_pred HHHHHhhhhhhhcccCcCcC-CcccchhhhccCCceeecccHHHHHHHHHHHHHHcccHHHHh
Confidence 33 2222223334444 678899999999999999976544444443333668887665
|
|
| >PF13524 Glyco_trans_1_2: Glycosyl transferases group 1 | Back alignment and domain information |
|---|
Probab=95.42 E-value=0.14 Score=38.88 Aligned_cols=83 Identities=14% Similarity=0.194 Sum_probs=53.3
Q ss_pred ccCchhHHHHHhhCCeEecCcccccchhhHHHHHHHhcceEEeccCCCCCCCHHHHHHHHHHHhCCcHHHHHHHHHHHHH
Q 042753 360 HCGWNSVLEGVSAGVVMLTWPMDADQYTNAQLLVDQLGVGIRVGEGTRNIPESDELARLLAQSVDGPRRERLKARELSGA 439 (473)
Q Consensus 360 HgG~~s~~eal~~GvP~l~~P~~~DQ~~na~rv~~~~G~G~~l~~~~~~~~~~~~l~~~i~~~l~~~~~~~~~a~~~~~~ 439 (473)
+|-..-+.|++++|+|+|+-+. ......+. . |.....- + +.+++.++|+.+++|++..++-+++-.+.
T Consensus 9 ~~~~~r~~E~~a~G~~vi~~~~----~~~~~~~~-~-~~~~~~~----~--~~~el~~~i~~ll~~~~~~~~ia~~a~~~ 76 (92)
T PF13524_consen 9 DGPNMRIFEAMACGTPVISDDS----PGLREIFE-D-GEHIITY----N--DPEELAEKIEYLLENPEERRRIAKNARER 76 (92)
T ss_pred CCCchHHHHHHHCCCeEEECCh----HHHHHHcC-C-CCeEEEE----C--CHHHHHHHHHHHHCCHHHHHHHHHHHHHH
Confidence 5556689999999999999864 33333332 3 4222222 2 89999999999999983333333333344
Q ss_pred HHHHHhcCCChHHHHHHHH
Q 042753 440 ALSAVVKGGSSDRDLNDFI 458 (473)
Q Consensus 440 ~~~~~~~~gs~~~~~~~~~ 458 (473)
+ ...-+.+..+++++
T Consensus 77 v----~~~~t~~~~~~~il 91 (92)
T PF13524_consen 77 V----LKRHTWEHRAEQIL 91 (92)
T ss_pred H----HHhCCHHHHHHHHH
Confidence 3 44566677777665
|
|
| >TIGR02195 heptsyl_trn_II lipopolysaccharide heptosyltransferase II | Back alignment and domain information |
|---|
Probab=95.38 E-value=2.5 Score=40.84 Aligned_cols=102 Identities=16% Similarity=0.082 Sum_probs=68.8
Q ss_pred EEEEEcCCCCCChHHHHHHHHHHHhC--CCeEEEEeCCCChhhhhhhccCCCCCCeeE-EEcCCCCCCCCCChhhHHHHH
Q 042753 7 HILVYPFPTSGHIIPLLDLTNRLLTL--GLNVTVLITQNNLPLLDSLNANHPSTSLQS-LVLPQPKWPAGSPATRLLKFM 83 (473)
Q Consensus 7 ~Il~~~~~~~GH~~p~l~La~~L~~r--Gh~Vt~~~~~~~~~~i~~~~~~~~~~~~~f-~~l~~~~~~~~~~~~~~~~~~ 83 (473)
|||++-..+.|++.-+.++.+.|.+. +.+|+|++.+.+.+.++.. +.++- ..++.. .+ ...+.
T Consensus 1 rILii~~~~iGD~i~~~p~l~~Lk~~~P~a~I~~l~~~~~~~l~~~~------p~id~v~~~~~~--~~------~~~~~ 66 (334)
T TIGR02195 1 KILVIGPSWVGDMVMAQSLYRLLKKRYPQAVIDVLAPAWCRPLLERM------PEIRQAIDMPLG--HG------ALELT 66 (334)
T ss_pred CEEEEccchhHHHHHHHHHHHHHHHHCCCCEEEEEechhhHHHHhcC------chhceeeecCCc--cc------chhhh
Confidence 68999999999999999999999996 9999999998776666654 33432 222211 00 00110
Q ss_pred HHHHHHhhHHHHHHHhcCCCCCcEEEeCCCcchHHHHHHHhCCCcEE
Q 042753 84 RVLRELHYPALLDWFKSHPSPPVAILSDFFLGWTQGLAAELGLPRVV 130 (473)
Q Consensus 84 ~~~~~~~~~~l~~~l~~~~~~pD~VV~D~~~~~~~~~A~~~giP~v~ 130 (473)
....+.+.++.. ++|++|.-........++...|+|.-.
T Consensus 67 ------~~~~~~~~lr~~--~yD~vi~l~~~~~s~ll~~~~~~~~ri 105 (334)
T TIGR02195 67 ------ERRRLGRSLREE--RYDQAIVLPNSLKSALIPFFAGIPHRT 105 (334)
T ss_pred ------HHHHHHHHHhhc--CCCEEEECCCCHHHHHHHHHcCCCcee
Confidence 112334556777 999999876555566677777887543
|
This family consists of examples of ADP-heptose:LPS heptosyltransferase II, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria. |
| >cd03789 GT1_LPS_heptosyltransferase Lipopolysaccharide heptosyltransferase is involved in the biosynthesis of lipooligosaccharide (LOS) | Back alignment and domain information |
|---|
Probab=95.19 E-value=2.4 Score=39.80 Aligned_cols=102 Identities=21% Similarity=0.143 Sum_probs=65.9
Q ss_pred EEEEEcCCCCCChHHHHHHHHHHHhC--CCeEEEEeCCCChhhhhhhccCCCCCCeeE-EEcCCCCCCCCCChhhHHHHH
Q 042753 7 HILVYPFPTSGHIIPLLDLTNRLLTL--GLNVTVLITQNNLPLLDSLNANHPSTSLQS-LVLPQPKWPAGSPATRLLKFM 83 (473)
Q Consensus 7 ~Il~~~~~~~GH~~p~l~La~~L~~r--Gh~Vt~~~~~~~~~~i~~~~~~~~~~~~~f-~~l~~~~~~~~~~~~~~~~~~ 83 (473)
|||++-..+.|++.-+.++.++|+++ +-+|++++.+.+.+.++.. +.++- ..++.. . ....+..+
T Consensus 1 kILii~~~~iGD~i~~~p~l~~Lk~~~P~~~I~~l~~~~~~~l~~~~------p~id~v~~~~~~--~---~~~~~~~~- 68 (279)
T cd03789 1 RILVIRLSWIGDVVLATPLLRALKARYPDARITVLAPPWFAPLLELM------PEVDRVIVLPKK--H---GKLGLGAR- 68 (279)
T ss_pred CEEEEecccHHHHHHHHHHHHHHHHHCCCCEEEEEEChhhHHHHhcC------CccCEEEEcCCc--c---cccchHHH-
Confidence 68999999999999999999999997 5899999999887776654 33432 223211 0 00011111
Q ss_pred HHHHHHhhHHHHHHHhcCCCCCcEEEeCCCcchHHHHHHHhCCCcEE
Q 042753 84 RVLRELHYPALLDWFKSHPSPPVAILSDFFLGWTQGLAAELGLPRVV 130 (473)
Q Consensus 84 ~~~~~~~~~~l~~~l~~~~~~pD~VV~D~~~~~~~~~A~~~giP~v~ 130 (473)
..+...++.. ++|+++.=........++...+++...
T Consensus 69 --------~~~~~~l~~~--~~D~vi~~~~~~~~~~~~~~~~~~~~~ 105 (279)
T cd03789 69 --------RRLARALRRR--RYDLAIDLQGSLRSALLPFLAGAPRRI 105 (279)
T ss_pred --------HHHHHHHhhc--CCCEEEECCCccHHHHHHHHhCCCeEE
Confidence 1223335556 899999766655545556666666543
|
Lipopolysaccharide (LPS) is a major component of the outer membrane of gram-negative bacteria. LPS heptosyltransferase transfers heptose molecules from ADP-heptose to 3-deoxy-D-manno-octulosonic acid (KDO), a part of the inner core component of LPS. This family belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. |
| >PRK14098 glycogen synthase; Provisional | Back alignment and domain information |
|---|
Probab=94.96 E-value=0.43 Score=48.81 Aligned_cols=168 Identities=14% Similarity=0.081 Sum_probs=90.5
Q ss_pred CcEEEEEeCCccc-CCHHHHHHHHHHHHhCCCcEEEEEeCCCccCCcccCCCCchhhHHhhc--CCCeEeecCccHH---
Q 042753 273 ESVVYVCFGSRYV-LTAKQIHELAAALEKTDVDFVYCVREPDERHASQDCGVLPDGFEDRVA--GRGYVIRGWSQQV--- 346 (473)
Q Consensus 273 ~~~V~vs~Gs~~~-~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~lp~~~~~~~~--~~nv~v~~~~pq~--- 346 (473)
+..+++..|.... ...+.+.+.+..+.+.+.+++ .++... ...-+.+++... +.++.+....+..
T Consensus 306 ~~~~i~~vgRl~~~KG~d~li~a~~~l~~~~~~lv-ivG~G~--------~~~~~~l~~l~~~~~~~V~~~g~~~~~~~~ 376 (489)
T PRK14098 306 ETPLVGVIINFDDFQGAELLAESLEKLVELDIQLV-ICGSGD--------KEYEKRFQDFAEEHPEQVSVQTEFTDAFFH 376 (489)
T ss_pred CCCEEEEeccccccCcHHHHHHHHHHHHhcCcEEE-EEeCCC--------HHHHHHHHHHHHHCCCCEEEEEecCHHHHH
Confidence 3456677777754 233444444444444455544 344431 111123333221 3567777777764
Q ss_pred HhhhccCccceeecc---Cc-hhHHHHHhhCCeEecCcccccchhhHHHHHHHhcceEEeccCCCCCCCHHHHHHHHHHH
Q 042753 347 AILRHKAVGAFLTHC---GW-NSVLEGVSAGVVMLTWPMDADQYTNAQLLVDQLGVGIRVGEGTRNIPESDELARLLAQS 422 (473)
Q Consensus 347 ~lL~~~~v~~~ItHg---G~-~s~~eal~~GvP~l~~P~~~DQ~~na~rv~~~~G~G~~l~~~~~~~~~~~~l~~~i~~~ 422 (473)
.+++.+++ |+.-+ |+ .+.+||+++|+|.|+....+-.........+. +.|...+ ..+++++.++|.++
T Consensus 377 ~~~a~aDi--~l~PS~~E~~Gl~~lEAma~G~ppVv~~~GGl~d~v~~~~~~~-~~G~l~~-----~~d~~~la~ai~~~ 448 (489)
T PRK14098 377 LAIAGLDM--LLMPGKIESCGMLQMFAMSYGTIPVAYAGGGIVETIEEVSEDK-GSGFIFH-----DYTPEALVAKLGEA 448 (489)
T ss_pred HHHHhCCE--EEeCCCCCCchHHHHHHHhCCCCeEEecCCCCceeeecCCCCC-CceeEeC-----CCCHHHHHHHHHHH
Confidence 57888887 66433 22 47789999999888765432111110011112 5677776 45789999999987
Q ss_pred h---CCcHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHhh
Q 042753 423 V---DGPRRERLKARELSGAALSAVVKGGSSDRDLNDFIKRINEL 464 (473)
Q Consensus 423 l---~~~~~~~~~a~~~~~~~~~~~~~~gs~~~~~~~~~~~~~~~ 464 (473)
+ +++ .. .++++.. +....-|-+..++++++...+.
T Consensus 449 l~~~~~~-~~---~~~~~~~---~~~~~fsw~~~a~~y~~lY~~~ 486 (489)
T PRK14098 449 LALYHDE-ER---WEELVLE---AMERDFSWKNSAEEYAQLYREL 486 (489)
T ss_pred HHHHcCH-HH---HHHHHHH---HhcCCCChHHHHHHHHHHHHHH
Confidence 6 343 21 1222222 2234456677777777766553
|
|
| >COG1618 Predicted nucleotide kinase [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=94.70 E-value=0.14 Score=42.88 Aligned_cols=104 Identities=17% Similarity=0.126 Sum_probs=71.0
Q ss_pred CCCCccEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCCCChhhhhhhccCCCCCCeeEEEcCCCCCC-----CC--
Q 042753 1 MLPAGAHILVYPFPTSGHIIPLLDLTNRLLTLGLNVTVLITQNNLPLLDSLNANHPSTSLQSLVLPQPKWP-----AG-- 73 (473)
Q Consensus 1 ~~~~~~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~i~~~~~~~~~~~~~f~~l~~~~~~-----~~-- 73 (473)
|.+.++||++.-.|+.|-..-.+.+++.|.+.|+.|-=+-+++..+-=+.. ||+.+.+.-.... +.
T Consensus 1 ~~~~~mki~ITG~PGvGKtTl~~ki~e~L~~~g~kvgGf~t~EVR~gGkR~-------GF~Ivdl~tg~~~~la~~~~~~ 73 (179)
T COG1618 1 MIKMAMKIFITGRPGVGKTTLVLKIAEKLREKGYKVGGFITPEVREGGKRI-------GFKIVDLATGEEGILARVGFSR 73 (179)
T ss_pred CCCcceEEEEeCCCCccHHHHHHHHHHHHHhcCceeeeEEeeeeecCCeEe-------eeEEEEccCCceEEEEEcCCCC
Confidence 556789999999999999999999999999999999777666543222222 5666665522111 11
Q ss_pred CChhhHHHHHHHHHHHhhHHHHHHHhcCCCCCcEEEeCCCcc
Q 042753 74 SPATRLLKFMRVLRELHYPALLDWFKSHPSPPVAILSDFFLG 115 (473)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~pD~VV~D~~~~ 115 (473)
+.-..+....+.+++...+.+++.+++. |+||.|..-+
T Consensus 74 ~rvGkY~V~v~~le~i~~~al~rA~~~a----DvIIIDEIGp 111 (179)
T COG1618 74 PRVGKYGVNVEGLEEIAIPALRRALEEA----DVIIIDEIGP 111 (179)
T ss_pred cccceEEeeHHHHHHHhHHHHHHHhhcC----CEEEEecccc
Confidence 1112233344566656778888888754 9999998743
|
|
| >PF01975 SurE: Survival protein SurE; InterPro: IPR002828 This entry represents a SurE-like structural domain with a 3-layer alpha/bete/alpha topology that bears some topological similarity to the N-terminal domain of the glutaminase/asparaginase family | Back alignment and domain information |
|---|
Probab=94.49 E-value=0.074 Score=46.83 Aligned_cols=121 Identities=15% Similarity=0.054 Sum_probs=61.5
Q ss_pred cEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCCCChhhhhhhccCCCCCCeeEEEcCCC-CCCCCCChhhHHHHHH
Q 042753 6 AHILVYPFPTSGHIIPLLDLTNRLLTLGLNVTVLITQNNLPLLDSLNANHPSTSLQSLVLPQP-KWPAGSPATRLLKFMR 84 (473)
Q Consensus 6 ~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~i~~~~~~~~~~~~~f~~l~~~-~~~~~~~~~~~~~~~~ 84 (473)
||||+.-==+. +---+..|+++|.+.||+|+++.+...+.-....+. ....++......+ ...+..... ...
T Consensus 1 M~ILlTNDDGi-~a~Gi~aL~~~L~~~g~~V~VvAP~~~~Sg~g~sit--~~~pl~~~~~~~~~~~~~~~~~~----v~G 73 (196)
T PF01975_consen 1 MRILLTNDDGI-DAPGIRALAKALSALGHDVVVVAPDSEQSGTGHSIT--LHKPLRVTEVEPGHDPGGVEAYA----VSG 73 (196)
T ss_dssp SEEEEE-SS-T-TSHHHHHHHHHHTTTSSEEEEEEESSSTTTSTTS----SSSEEEEEEEE-TTCCSTTEEEE----ESS
T ss_pred CeEEEEcCCCC-CCHHHHHHHHHHHhcCCeEEEEeCCCCCcCcceeec--CCCCeEEEEEEecccCCCCCEEE----EcC
Confidence 56666663333 344578899999778899999999877544333221 1112444322100 000000000 000
Q ss_pred HHHHHhhHHHHHHHhcCCCCCcEEEeC----------CCcc---hHHHHHHHhCCCcEEEecch
Q 042753 85 VLRELHYPALLDWFKSHPSPPVAILSD----------FFLG---WTQGLAAELGLPRVVFSPSG 135 (473)
Q Consensus 85 ~~~~~~~~~l~~~l~~~~~~pD~VV~D----------~~~~---~~~~~A~~~giP~v~~~~~~ 135 (473)
.--....-.+..++.+. +||+||+. .+++ .++.-|..+|||.|.++...
T Consensus 74 TPaDcv~~al~~~~~~~--~pDLViSGiN~G~N~g~~v~~SGTVgAA~ea~~~GipaIA~S~~~ 135 (196)
T PF01975_consen 74 TPADCVKLALDGLLPDK--KPDLVISGINHGANLGTDVLYSGTVGAAMEAALRGIPAIAVSLDS 135 (196)
T ss_dssp -HHHHHHHHHHCTSTTS--S-SEEEEEEEES---GGGGGG-HHHHHHHHHHHTTSEEEEEEEES
T ss_pred cHHHHHHHHHHhhhccC--CCCEEEECCCCCccCCcCcccccHHHHHHHHHHcCCCeEEEeccc
Confidence 00002223455556555 79999964 3333 33455677899999987663
|
This domain is found in the stationary phase survival protein SurE, a metal ion-dependent phosphatase found in eubacteria, archaea and eukaryotes. In Escherichia coli, SurE also has activity as a nucleotidase and exopolyphosphatase, and may be involved in the stress response []. E. coli cells with mutations in the surE gene survive poorly in stationary phase []. The structure of SurE homologues have been determined from Thermotoga maritima [] and the archaea Pyrobaculum aerophilum []. The T. maritima SurE homologue has phosphatase activity that is inhibited by vanadate or tungstate, both of which bind adjacent to the divalent metal ion. This domain is found in acid phosphatases (3.1.3.2 from EC), 5'-nucleotidases (3.1.3.5 from EC), 3'-nucleotidases (3.1.3.6 from EC) and exopolyphosphatases (3.6.1.11 from EC).; GO: 0016787 hydrolase activity; PDB: 1L5X_B 2V4O_D 2V4N_A 2WQK_B 2E6G_G 2E69_D 2E6C_C 2E6B_D 2E6E_A 2E6H_A .... |
| >PHA01630 putative group 1 glycosyl transferase | Back alignment and domain information |
|---|
Probab=94.24 E-value=2.5 Score=40.80 Aligned_cols=110 Identities=9% Similarity=0.043 Sum_probs=62.1
Q ss_pred cCccHHH---hhhccCccceee---ccC-chhHHHHHhhCCeEecCcccc--cchh---hHHHHHH----------Hhcc
Q 042753 341 GWSQQVA---ILRHKAVGAFLT---HCG-WNSVLEGVSAGVVMLTWPMDA--DQYT---NAQLLVD----------QLGV 398 (473)
Q Consensus 341 ~~~pq~~---lL~~~~v~~~It---HgG-~~s~~eal~~GvP~l~~P~~~--DQ~~---na~rv~~----------~~G~ 398 (473)
.++|+.+ +++.+++ |+. ..| ..++.||+++|+|+|+.-..+ |.-. |...+.. -.++
T Consensus 196 ~~v~~~~l~~~y~~aDv--~v~pS~~E~fgl~~lEAMA~G~PVIas~~gg~~E~i~~~~ng~lv~~~~~~~~~~~~~~~~ 273 (331)
T PHA01630 196 TPLPDDDIYSLFAGCDI--LFYPVRGGAFEIPVIEALALGLDVVVTEKGAWSEWVLSNLDVYWIKSGRKPKLWYTNPIHV 273 (331)
T ss_pred ccCCHHHHHHHHHhCCE--EEECCccccCChHHHHHHHcCCCEEEeCCCCchhhccCCCceEEeeecccccccccCCccc
Confidence 3466544 5788887 542 222 558999999999999976432 2211 1111100 0024
Q ss_pred eEEeccCCCCCCCHHHHHHHHHHHhCCc--HHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHH
Q 042753 399 GIRVGEGTRNIPESDELARLLAQSVDGP--RRERLKARELSGAALSAVVKGGSSDRDLNDFIKRIN 462 (473)
Q Consensus 399 G~~l~~~~~~~~~~~~l~~~i~~~l~~~--~~~~~~a~~~~~~~~~~~~~~gs~~~~~~~~~~~~~ 462 (473)
|..++ .+.+++.+++.+++.|. +.++++.+.-+... ...-|-+..++++++.++
T Consensus 274 G~~v~------~~~~~~~~~ii~~l~~~~~~~~~~~~~~~~~~~----~~~fs~~~ia~k~~~l~~ 329 (331)
T PHA01630 274 GYFLD------PDIEDAYQKLLEALANWTPEKKKENLEGRAILY----RENYSYNAIAKMWEKILE 329 (331)
T ss_pred ccccC------CCHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHH----HHhCCHHHHHHHHHHHHh
Confidence 54443 35777888888888762 24444333333322 233566777777777664
|
|
| >PF06258 Mito_fiss_Elm1: Mitochondrial fission ELM1; InterPro: IPR009367 This family consists of several hypothetical eukaryotic and prokaryotic proteins | Back alignment and domain information |
|---|
Probab=93.32 E-value=7.5 Score=37.08 Aligned_cols=57 Identities=16% Similarity=0.140 Sum_probs=43.2
Q ss_pred cHHHhhhccCccceeeccCchhHHHHHhhCCeEecCcccccchh----hHHHHHHHhcceEEec
Q 042753 344 QQVAILRHKAVGAFLTHCGWNSVLEGVSAGVVMLTWPMDADQYT----NAQLLVDQLGVGIRVG 403 (473)
Q Consensus 344 pq~~lL~~~~v~~~ItHgG~~s~~eal~~GvP~l~~P~~~DQ~~----na~rv~~~~G~G~~l~ 403 (473)
|+...|+.++. .+||--..+=+.||+..|+|+.++|+.. +.. -.+.+.+. |+-..++
T Consensus 221 Py~~~La~ad~-i~VT~DSvSMvsEA~~tG~pV~v~~l~~-~~~r~~r~~~~L~~~-g~~r~~~ 281 (311)
T PF06258_consen 221 PYLGFLAAADA-IVVTEDSVSMVSEAAATGKPVYVLPLPG-RSGRFRRFHQSLEER-GAVRPFT 281 (311)
T ss_pred cHHHHHHhCCE-EEEcCccHHHHHHHHHcCCCEEEecCCC-cchHHHHHHHHHHHC-CCEEECC
Confidence 67889999986 7889889999999999999999999876 333 22334423 6666655
|
The function of this family is unknown. |
| >TIGR03713 acc_sec_asp1 accessory Sec system protein Asp1 | Back alignment and domain information |
|---|
Probab=93.25 E-value=1.1 Score=45.99 Aligned_cols=89 Identities=12% Similarity=0.167 Sum_probs=59.4
Q ss_pred CCeEeecCcc--H-HHhhhccCccceeecc---CchhHHHHHhhCCeEecCcccccchhhHHHHHHHhcceEEeccCCCC
Q 042753 335 RGYVIRGWSQ--Q-VAILRHKAVGAFLTHC---GWNSVLEGVSAGVVMLTWPMDADQYTNAQLLVDQLGVGIRVGEGTRN 408 (473)
Q Consensus 335 ~nv~v~~~~p--q-~~lL~~~~v~~~ItHg---G~~s~~eal~~GvP~l~~P~~~DQ~~na~rv~~~~G~G~~l~~~~~~ 408 (473)
..|.+.++.. + ..++.++++ +|.=+ |.++..||+.+|+|+| .......|. ...=|..++
T Consensus 409 ~~v~f~gy~~e~dl~~~~~~arl--~id~s~~eg~~~~ieAiS~GiPqI-------nyg~~~~V~-d~~NG~li~----- 473 (519)
T TIGR03713 409 ERIAFTTLTNEEDLISALDKLRL--IIDLSKEPDLYTQISGISAGIPQI-------NKVETDYVE-HNKNGYIID----- 473 (519)
T ss_pred cEEEEEecCCHHHHHHHHhhheE--EEECCCCCChHHHHHHHHcCCCee-------ecCCceeeE-cCCCcEEeC-----
Confidence 3566777777 3 346777776 77655 6779999999999999 222333343 213355554
Q ss_pred CCCHHHHHHHHHHHhCCc---HHHHHHHHHHHHHH
Q 042753 409 IPESDELARLLAQSVDGP---RRERLKARELSGAA 440 (473)
Q Consensus 409 ~~~~~~l~~~i~~~l~~~---~~~~~~a~~~~~~~ 440 (473)
+.++|.++|..+|++. +.+...+-+.++.+
T Consensus 474 --d~~~l~~al~~~L~~~~~wn~~~~~sy~~~~~y 506 (519)
T TIGR03713 474 --DISELLKALDYYLDNLKNWNYSLAYSIKLIDDY 506 (519)
T ss_pred --CHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHh
Confidence 6889999999999987 44555555544444
|
This protein is designated Asp1 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown. |
| >PF12000 Glyco_trans_4_3: Gkycosyl transferase family 4 group; InterPro: IPR022623 This presumed domain is functionally uncharacterised and found in bacteria | Back alignment and domain information |
|---|
Probab=93.18 E-value=1.1 Score=38.47 Aligned_cols=92 Identities=15% Similarity=0.100 Sum_probs=54.4
Q ss_pred hCCCeEEEEeCCCChhhhhhhccCCCCCCeeEEEcCCCCC--CCCCC-hhhHHHHHHHHHHHhhHHHHHHHhc-CCCCCc
Q 042753 31 TLGLNVTVLITQNNLPLLDSLNANHPSTSLQSLVLPQPKW--PAGSP-ATRLLKFMRVLRELHYPALLDWFKS-HPSPPV 106 (473)
Q Consensus 31 ~rGh~Vt~~~~~~~~~~i~~~~~~~~~~~~~f~~l~~~~~--~~~~~-~~~~~~~~~~~~~~~~~~l~~~l~~-~~~~pD 106 (473)
++||+|++++........ +|++...+..+.. .+..+ ...+..-...-+ .+...+.++-++ . .||
T Consensus 1 q~gh~v~fl~~~~~~~~~---------~GV~~~~y~~~~~~~~~~~~~~~~~e~~~~rg~-av~~a~~~L~~~Gf--~PD 68 (171)
T PF12000_consen 1 QRGHEVVFLTERKRPPIP---------PGVRVVRYRPPRGPTPGTHPYVRDFEAAVLRGQ-AVARAARQLRAQGF--VPD 68 (171)
T ss_pred CCCCEEEEEecCCCCCCC---------CCcEEEEeCCCCCCCCCCCcccccHHHHHHHHH-HHHHHHHHHHHcCC--CCC
Confidence 479999999965443222 2676666654321 11111 122222222222 334455555444 4 789
Q ss_pred EEEeCCCcchHHHHHHHh-CCCcEEEecc
Q 042753 107 AILSDFFLGWTQGLAAEL-GLPRVVFSPS 134 (473)
Q Consensus 107 ~VV~D~~~~~~~~~A~~~-giP~v~~~~~ 134 (473)
+||...-.-.++.+-..+ ++|.+.++-.
T Consensus 69 vI~~H~GWGe~Lflkdv~P~a~li~Y~E~ 97 (171)
T PF12000_consen 69 VIIAHPGWGETLFLKDVFPDAPLIGYFEF 97 (171)
T ss_pred EEEEcCCcchhhhHHHhCCCCcEEEEEEE
Confidence 999998766778888888 9999998655
|
This region is about 170 amino acids in length and is found N-terminal to PF00534 from PFAM. There is a single completely conserved residue G that may be functionally important. |
| >PF13439 Glyco_transf_4: Glycosyltransferase Family 4; PDB: 2JJM_E 3MBO_C 2GEJ_A 2GEK_A | Back alignment and domain information |
|---|
Probab=92.85 E-value=0.6 Score=39.73 Aligned_cols=101 Identities=21% Similarity=0.198 Sum_probs=52.7
Q ss_pred CCCChHHHHHHHHHHHhCCCeEEEEeCCCChhhhhhhccCCCCCCeeEEEcCCCCCCCCCChhhHHHHHHHHHHHhhHHH
Q 042753 15 TSGHIIPLLDLTNRLLTLGLNVTVLITQNNLPLLDSLNANHPSTSLQSLVLPQPKWPAGSPATRLLKFMRVLRELHYPAL 94 (473)
Q Consensus 15 ~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~i~~~~~~~~~~~~~f~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 94 (473)
..|=-.-+..|+++|.++||+|+++++.......... ......... .......... .....+
T Consensus 11 ~GG~e~~~~~l~~~l~~~G~~v~v~~~~~~~~~~~~~-------~~~~~~~~~------~~~~~~~~~~-----~~~~~~ 72 (177)
T PF13439_consen 11 IGGAERVVLNLARALAKRGHEVTVVSPGVKDPIEEEL-------VKIFVKIPY------PIRKRFLRSF-----FFMRRL 72 (177)
T ss_dssp SSHHHHHHHHHHHHHHHTT-EEEEEESS-TTS-SSTE-------EEE---TT-------SSTSS--HHH-----HHHHHH
T ss_pred CChHHHHHHHHHHHHHHCCCEEEEEEcCCCccchhhc-------cceeeeeec------ccccccchhH-----HHHHHH
Confidence 3466677899999999999999999887443222210 011111110 0001111111 123456
Q ss_pred HHHHhcCCCCCcEEEeCCCcc-hHHHHHHHhCCCcEEEecchH
Q 042753 95 LDWFKSHPSPPVAILSDFFLG-WTQGLAAELGLPRVVFSPSGA 136 (473)
Q Consensus 95 ~~~l~~~~~~pD~VV~D~~~~-~~~~~A~~~giP~v~~~~~~~ 136 (473)
.+++++. +||+|-+..... +....+.. ++|.+.......
T Consensus 73 ~~~i~~~--~~DiVh~~~~~~~~~~~~~~~-~~~~v~~~H~~~ 112 (177)
T PF13439_consen 73 RRLIKKE--KPDIVHIHGPPAFWIALLACR-KVPIVYTIHGPY 112 (177)
T ss_dssp HHHHHHH--T-SEEECCTTHCCCHHHHHHH-CSCEEEEE-HHH
T ss_pred HHHHHHc--CCCeEEecccchhHHHHHhcc-CCCEEEEeCCCc
Confidence 7778888 999995554433 33333333 999988765544
|
|
| >PF08660 Alg14: Oligosaccharide biosynthesis protein Alg14 like; InterPro: IPR013969 Alg14 is involved dolichol-linked oligosaccharide biosynthesis and anchors the catalytic subunit Alg13 to the ER membrane [] | Back alignment and domain information |
|---|
Probab=90.73 E-value=2.9 Score=35.90 Aligned_cols=117 Identities=16% Similarity=0.122 Sum_probs=62.6
Q ss_pred EEcCCCCCChHHHHHHHHHH-HhC-CCeEEEEeCCCCh--hhhhhhccCCCCCCeeEEEcCCCCCCCCCChhhHHHHHHH
Q 042753 10 VYPFPTSGHIIPLLDLTNRL-LTL-GLNVTVLITQNNL--PLLDSLNANHPSTSLQSLVLPQPKWPAGSPATRLLKFMRV 85 (473)
Q Consensus 10 ~~~~~~~GH~~p~l~La~~L-~~r-Gh~Vt~~~~~~~~--~~i~~~~~~~~~~~~~f~~l~~~~~~~~~~~~~~~~~~~~ 85 (473)
++..++.||..-|+.|.+.+ .++ .++..+++..+.. .++++... .......+..+|...... +......+..
T Consensus 2 l~v~gsGGHt~eml~L~~~~~~~~~~~~~~ivt~~d~~S~~k~~~~~~-~~~~~~~~~~~~r~r~v~---q~~~~~~~~~ 77 (170)
T PF08660_consen 2 LVVLGSGGHTAEMLRLLKALDNDRYQPRTYIVTEGDKQSRSKAEQLEK-SSSKRHKILEIPRAREVG---QSYLTSIFTT 77 (170)
T ss_pred EEEEcCcHHHHHHHHHHHHhhhhcCCCcEEEEEcCCcccHHHHHHHHH-hccccceeeccceEEEec---hhhHhhHHHH
Confidence 34456789999999999999 333 5666666655432 22222110 000111333333211000 1111122222
Q ss_pred HHHHhhHHHHHHHhcCCCCCcEEEeCCCcc--hHHHHHHHh------CCCcEEEecc
Q 042753 86 LRELHYPALLDWFKSHPSPPVAILSDFFLG--WTQGLAAEL------GLPRVVFSPS 134 (473)
Q Consensus 86 ~~~~~~~~l~~~l~~~~~~pD~VV~D~~~~--~~~~~A~~~------giP~v~~~~~ 134 (473)
+. .+...+.-+ ... +||+||+.-... ....+|..+ |.+.|.+-+.
T Consensus 78 l~-~~~~~~~il-~r~--rPdvii~nGpg~~vp~~~~~~l~~~~~~~~~kiIyIES~ 130 (170)
T PF08660_consen 78 LR-AFLQSLRIL-RRE--RPDVIISNGPGTCVPVCLAAKLLRLLGLRGSKIIYIESF 130 (170)
T ss_pred HH-HHHHHHHHH-HHh--CCCEEEEcCCceeeHHHHHHHHHHHhhccCCcEEEEEee
Confidence 22 333443333 445 899999998866 345778888 9998887444
|
|
| >KOG2941 consensus Beta-1,4-mannosyltransferase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=90.63 E-value=16 Score=34.86 Aligned_cols=125 Identities=17% Similarity=0.133 Sum_probs=74.6
Q ss_pred CCccEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCCCChh--hhhhhccCCCCCCeeEEEcCCCCCCCCCChhhHH
Q 042753 3 PAGAHILVYPFPTSGHIIPLLDLTNRLLTLGLNVTVLITQNNLP--LLDSLNANHPSTSLQSLVLPQPKWPAGSPATRLL 80 (473)
Q Consensus 3 ~~~~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~--~i~~~~~~~~~~~~~f~~l~~~~~~~~~~~~~~~ 80 (473)
+..+|+.++..+-.||--.|.-=|..|++.|++|.+++..+... .+-.. ++++++.++....-+..+. .+.
T Consensus 10 ~~k~ra~vvVLGDvGRSPRMqYHA~Sla~~gf~VdliGy~~s~p~e~l~~h------prI~ih~m~~l~~~~~~p~-~~~ 82 (444)
T KOG2941|consen 10 SKKKRAIVVVLGDVGRSPRMQYHALSLAKLGFQVDLIGYVESIPLEELLNH------PRIRIHGMPNLPFLQGGPR-VLF 82 (444)
T ss_pred cccceEEEEEecccCCChHHHHHHHHHHHcCCeEEEEEecCCCChHHHhcC------CceEEEeCCCCcccCCCch-hhh
Confidence 34678999999999999999999999999999999999765432 22222 6899998875432222222 111
Q ss_pred HHHHHHHHHhhHHHHHHHhcCCCCCcEEEeCCC-cchHHHHH----HHhCCCcEEEecchHH
Q 042753 81 KFMRVLRELHYPALLDWFKSHPSPPVAILSDFF-LGWTQGLA----AELGLPRVVFSPSGAF 137 (473)
Q Consensus 81 ~~~~~~~~~~~~~l~~~l~~~~~~pD~VV~D~~-~~~~~~~A----~~~giP~v~~~~~~~~ 137 (473)
.....+. .+..-+-.++... ++|.+++-.. ......+| ...|..+++=|....+
T Consensus 83 l~lKvf~-Qfl~Ll~aL~~~~--~~~~ilvQNPP~iPtliv~~~~~~l~~~KfiIDWHNy~Y 141 (444)
T KOG2941|consen 83 LPLKVFW-QFLSLLWALFVLR--PPDIILVQNPPSIPTLIVCVLYSILTGAKFIIDWHNYGY 141 (444)
T ss_pred hHHHHHH-HHHHHHHHHHhcc--CCcEEEEeCCCCCchHHHHHHHHHHhcceEEEEehhhHH
Confidence 1122222 1122233333334 7888876554 22333444 3346777766554443
|
|
| >PLN02939 transferase, transferring glycosyl groups | Back alignment and domain information |
|---|
Probab=89.97 E-value=8.7 Score=42.12 Aligned_cols=83 Identities=12% Similarity=0.115 Sum_probs=52.2
Q ss_pred CCeEeecCccHH---HhhhccCccceeec----cCchhHHHHHhhCCeEecCcccc--cchhh--HHHHHHHhcceEEec
Q 042753 335 RGYVIRGWSQQV---AILRHKAVGAFLTH----CGWNSVLEGVSAGVVMLTWPMDA--DQYTN--AQLLVDQLGVGIRVG 403 (473)
Q Consensus 335 ~nv~v~~~~pq~---~lL~~~~v~~~ItH----gG~~s~~eal~~GvP~l~~P~~~--DQ~~n--a~rv~~~~G~G~~l~ 403 (473)
++|.+..+.+.. .+++.+++ ||.- +-..+.+||+++|+|.|+....+ |.-.. ...+...-+-|....
T Consensus 837 drV~FlG~~de~lah~IYAaADI--FLmPSr~EPfGLvqLEAMAyGtPPVVs~vGGL~DtV~d~d~e~i~~eg~NGfLf~ 914 (977)
T PLN02939 837 NNIRLILKYDEALSHSIYAASDM--FIIPSMFEPCGLTQMIAMRYGSVPIVRKTGGLNDSVFDFDDETIPVELRNGFTFL 914 (977)
T ss_pred CeEEEEeccCHHHHHHHHHhCCE--EEECCCccCCcHHHHHHHHCCCCEEEecCCCCcceeecCCccccccCCCceEEec
Confidence 467776777764 47888887 7743 33458999999999988865533 21110 000110114576665
Q ss_pred cCCCCCCCHHHHHHHHHHHhC
Q 042753 404 EGTRNIPESDELARLLAQSVD 424 (473)
Q Consensus 404 ~~~~~~~~~~~l~~~i~~~l~ 424 (473)
..+.+.+.++|.+++.
T Consensus 915 -----~~D~eaLa~AL~rAL~ 930 (977)
T PLN02939 915 -----TPDEQGLNSALERAFN 930 (977)
T ss_pred -----CCCHHHHHHHHHHHHH
Confidence 3578889888888764
|
|
| >COG0496 SurE Predicted acid phosphatase [General function prediction only] | Back alignment and domain information |
|---|
Probab=89.74 E-value=1.8 Score=39.38 Aligned_cols=98 Identities=17% Similarity=0.117 Sum_probs=56.7
Q ss_pred HHHHHHHHHHHhCCCeEEEEeCCCChhhhhhhccCCCCCCeeEEEcCCC--CCCCCCChhhHHHHHHHHHHHhhHHHHHH
Q 042753 20 IPLLDLTNRLLTLGLNVTVLITQNNLPLLDSLNANHPSTSLQSLVLPQP--KWPAGSPATRLLKFMRVLRELHYPALLDW 97 (473)
Q Consensus 20 ~p~l~La~~L~~rGh~Vt~~~~~~~~~~i~~~~~~~~~~~~~f~~l~~~--~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 97 (473)
--+.+|++.|. .+++|+++.+..++.-+...+. ....++...+... ...+-|.+ ...-.+..+
T Consensus 14 ~Gi~aL~~al~-~~~dV~VVAP~~~qSg~s~slT--l~~Plr~~~~~~~~~av~GTPaD------------CV~lal~~l 78 (252)
T COG0496 14 PGIRALARALR-EGADVTVVAPDREQSGASHSLT--LHEPLRVRQVDNGAYAVNGTPAD------------CVILGLNEL 78 (252)
T ss_pred HHHHHHHHHHh-hCCCEEEEccCCCCcccccccc--cccCceeeEeccceEEecCChHH------------HHHHHHHHh
Confidence 33667888888 8999999999877544433221 0112332222211 01111111 333456777
Q ss_pred HhcCCCCCcEEEeC----------CCcc---hHHHHHHHhCCCcEEEecc
Q 042753 98 FKSHPSPPVAILSD----------FFLG---WTQGLAAELGLPRVVFSPS 134 (473)
Q Consensus 98 l~~~~~~pD~VV~D----------~~~~---~~~~~A~~~giP~v~~~~~ 134 (473)
+++. .||+||+. ..++ .++.=|..+|||.|.++..
T Consensus 79 ~~~~--~pDLVvSGIN~G~Nlg~dv~ySGTVaaA~Ea~~~GipsIA~S~~ 126 (252)
T COG0496 79 LKEP--RPDLVVSGINAGANLGDDVIYSGTVAAAMEAALLGIPAIAISLA 126 (252)
T ss_pred ccCC--CCCEEEeCccCCCccccceeeeehHHHHHHHHHcCccceeeeeh
Confidence 7776 79999964 3333 3445567789999998655
|
|
| >TIGR00715 precor6x_red precorrin-6x reductase | Back alignment and domain information |
|---|
Probab=89.21 E-value=3.4 Score=38.12 Aligned_cols=91 Identities=20% Similarity=0.228 Sum_probs=56.1
Q ss_pred cEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCCCChh-hhhhhccCCCCCCeeEEEcCCCCCCCCCChhhHHHHHH
Q 042753 6 AHILVYPFPTSGHIIPLLDLTNRLLTLGLNVTVLITQNNLP-LLDSLNANHPSTSLQSLVLPQPKWPAGSPATRLLKFMR 84 (473)
Q Consensus 6 ~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~-~i~~~~~~~~~~~~~f~~l~~~~~~~~~~~~~~~~~~~ 84 (473)
+||+++.. .|. -..|++.|.++||+|+..+...... .+... ...... .. .
T Consensus 1 m~ILvlGG--T~e---gr~la~~L~~~g~~v~~s~~t~~~~~~~~~~------g~~~v~-~g-----~------------ 51 (256)
T TIGR00715 1 MTVLLMGG--TVD---SRAIAKGLIAQGIEILVTVTTSEGKHLYPIH------QALTVH-TG-----A------------ 51 (256)
T ss_pred CeEEEEec--hHH---HHHHHHHHHhCCCeEEEEEccCCcccccccc------CCceEE-EC-----C------------
Confidence 35655543 332 5689999999999999888765432 22221 011221 11 0
Q ss_pred HHHHHhhHHHHHHHhcCCCCCcEEEeCCCcc------hHHHHHHHhCCCcEEE
Q 042753 85 VLRELHYPALLDWFKSHPSPPVAILSDFFLG------WTQGLAAELGLPRVVF 131 (473)
Q Consensus 85 ~~~~~~~~~l~~~l~~~~~~pD~VV~D~~~~------~~~~~A~~~giP~v~~ 131 (473)
.-...+.+++++. ++|+||--.+-+ -+..+|+++|||++.+
T Consensus 52 ----l~~~~l~~~l~~~--~i~~VIDAtHPfA~~is~~a~~a~~~~~ipylR~ 98 (256)
T TIGR00715 52 ----LDPQELREFLKRH--SIDILVDATHPFAAQITTNATAVCKELGIPYVRF 98 (256)
T ss_pred ----CCHHHHHHHHHhc--CCCEEEEcCCHHHHHHHHHHHHHHHHhCCcEEEE
Confidence 0113366778888 999888555422 2357889999999996
|
This enzyme was found to be a monomer by gel filtration. |
| >PRK13933 stationary phase survival protein SurE; Provisional | Back alignment and domain information |
|---|
Probab=87.86 E-value=6 Score=36.35 Aligned_cols=36 Identities=19% Similarity=0.247 Sum_probs=24.6
Q ss_pred cEEEEEc---CCCCCChHHHHHHHHHHHhCCCeEEEEeCCCChh
Q 042753 6 AHILVYP---FPTSGHIIPLLDLTNRLLTLGLNVTVLITQNNLP 46 (473)
Q Consensus 6 ~~Il~~~---~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~ 46 (473)
||||+.- +.+.| +.+|+++|.+ +|+|+++.+...+.
T Consensus 1 M~ILvtNDDGi~apG----l~aL~~~l~~-~~~V~VvAP~~~~S 39 (253)
T PRK13933 1 MNILLTNDDGINAEG----INTLAELLSK-YHEVIIVAPENQRS 39 (253)
T ss_pred CeEEEEcCCCCCChh----HHHHHHHHHh-CCcEEEEccCCCCc
Confidence 3676665 22333 7788888865 68999998876644
|
|
| >PRK08057 cobalt-precorrin-6x reductase; Reviewed | Back alignment and domain information |
|---|
Probab=86.99 E-value=3.4 Score=37.94 Aligned_cols=91 Identities=11% Similarity=0.035 Sum_probs=57.6
Q ss_pred ccEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCCCChhhhhhhccCCCCCCeeEEEcCCCCCCCCCChhhHHHHHH
Q 042753 5 GAHILVYPFPTSGHIIPLLDLTNRLLTLGLNVTVLITQNNLPLLDSLNANHPSTSLQSLVLPQPKWPAGSPATRLLKFMR 84 (473)
Q Consensus 5 ~~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~i~~~~~~~~~~~~~f~~l~~~~~~~~~~~~~~~~~~~ 84 (473)
|++|+++..-+-| -.||+.|.++|+.|++.+...... ... .+.....=. +
T Consensus 2 ~~~IlvlgGT~eg-----r~la~~L~~~g~~v~~Svat~~g~-~~~-------~~~~v~~G~------l----------- 51 (248)
T PRK08057 2 MPRILLLGGTSEA-----RALARALAAAGVDIVLSLAGRTGG-PAD-------LPGPVRVGG------F----------- 51 (248)
T ss_pred CceEEEEechHHH-----HHHHHHHHhCCCeEEEEEccCCCC-ccc-------CCceEEECC------C-----------
Confidence 5778877665555 468999999999888776665433 111 122222111 1
Q ss_pred HHHHHhhHHHHHHHhcCCCCCcEEEeCCCcc------hHHHHHHHhCCCcEEE
Q 042753 85 VLRELHYPALLDWFKSHPSPPVAILSDFFLG------WTQGLAAELGLPRVVF 131 (473)
Q Consensus 85 ~~~~~~~~~l~~~l~~~~~~pD~VV~D~~~~------~~~~~A~~~giP~v~~ 131 (473)
.-.+.+.+++++. ++++||=-.+-+ -+..+|+++|||++.|
T Consensus 52 ----~~~~~l~~~l~~~--~i~~VIDATHPfA~~is~~a~~ac~~~~ipyiR~ 98 (248)
T PRK08057 52 ----GGAEGLAAYLREE--GIDLVIDATHPYAAQISANAAAACRALGIPYLRL 98 (248)
T ss_pred ----CCHHHHHHHHHHC--CCCEEEECCCccHHHHHHHHHHHHHHhCCcEEEE
Confidence 0235677788888 999988333311 2457889999999997
|
|
| >smart00851 MGS MGS-like domain | Back alignment and domain information |
|---|
Probab=86.85 E-value=4.6 Score=30.45 Aligned_cols=79 Identities=22% Similarity=0.303 Sum_probs=48.7
Q ss_pred HHHHHHHHHhCCCeEEEEeCCCChhhhhhhccCCCCCCeeEEEcCCCCCCCCCChhhHHHHHHHHHHHhhHHHHHHHhcC
Q 042753 22 LLDLTNRLLTLGLNVTVLITQNNLPLLDSLNANHPSTSLQSLVLPQPKWPAGSPATRLLKFMRVLRELHYPALLDWFKSH 101 (473)
Q Consensus 22 ~l~La~~L~~rGh~Vt~~~~~~~~~~i~~~~~~~~~~~~~f~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 101 (473)
++.+++.|.+.|++| + +++.....++.. |+....+.....++ .+.+.+.++..
T Consensus 2 ~~~~~~~l~~lG~~i-~-AT~gTa~~L~~~-------Gi~~~~~~~ki~~~------------------~~~i~~~i~~g 54 (90)
T smart00851 2 LVELAKRLAELGFEL-V-ATGGTAKFLREA-------GLPVKTLHPKVHGG------------------ILAILDLIKNG 54 (90)
T ss_pred HHHHHHHHHHCCCEE-E-EccHHHHHHHHC-------CCcceeccCCCCCC------------------CHHHHHHhcCC
Confidence 468999999999997 3 444455666655 45442111100011 12366778888
Q ss_pred CCCCcEEEeCCCc---------chHHHHHHHhCCCcE
Q 042753 102 PSPPVAILSDFFL---------GWTQGLAAELGLPRV 129 (473)
Q Consensus 102 ~~~pD~VV~D~~~---------~~~~~~A~~~giP~v 129 (473)
++|+||..... ......|...+||++
T Consensus 55 --~id~VIn~~~~~~~~~~~d~~~iRr~A~~~~Ip~~ 89 (90)
T smart00851 55 --EIDLVINTLYPLGAQPHEDGKALRRAAENIDIPGA 89 (90)
T ss_pred --CeEEEEECCCcCcceeccCcHHHHHHHHHcCCCee
Confidence 99999985431 123467888899976
|
This domain composes the whole protein of methylglyoxal synthetase and the domain is also found in Carbamoyl phosphate synthetase (CPS) where it forms a regulatory domain that binds to the allosteric effector ornithine. This family also includes inosicase. The known structures in this family show a common phosphate binding site PUBMED:10526357. |
| >PF04464 Glyphos_transf: CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase ; InterPro: IPR007554 Wall-associated teichoic acids are a heterogeneous class of phosphate-rich polymers that are covalently linked to the cell wall peptidoglycan of Gram-positive bacteria | Back alignment and domain information |
|---|
Probab=86.76 E-value=0.62 Score=45.76 Aligned_cols=115 Identities=13% Similarity=0.212 Sum_probs=67.8
Q ss_pred CCCeEee-cCccHHHhhhccCccceeeccCchhHHHHHhhCCeEecCcccccchhhHHHHHHHhcceEEeccCC--CCCC
Q 042753 334 GRGYVIR-GWSQQVAILRHKAVGAFLTHCGWNSVLEGVSAGVVMLTWPMDADQYTNAQLLVDQLGVGIRVGEGT--RNIP 410 (473)
Q Consensus 334 ~~nv~v~-~~~pq~~lL~~~~v~~~ItHgG~~s~~eal~~GvP~l~~P~~~DQ~~na~rv~~~~G~G~~l~~~~--~~~~ 410 (473)
..+++.. +..+-.++|..+++ +||--. ..+.|.++.++|++......|++... + |.-......- ..--
T Consensus 251 ~~~i~~~~~~~~~~~ll~~aDi--LITDyS-Si~fD~~~l~KPiify~~D~~~Y~~~-----r-g~~~~~~~~~pg~~~~ 321 (369)
T PF04464_consen 251 NSNIIFVSDNEDIYDLLAAADI--LITDYS-SIIFDFLLLNKPIIFYQPDLEEYEKE-----R-GFYFDYEEDLPGPIVY 321 (369)
T ss_dssp TTTEEE-TT-S-HHHHHHT-SE--EEESS--THHHHHGGGT--EEEE-TTTTTTTTT-----S-SBSS-TTTSSSS-EES
T ss_pred CCcEEECCCCCCHHHHHHhcCE--EEEech-hHHHHHHHhCCCEEEEeccHHHHhhc-----c-CCCCchHhhCCCceeC
Confidence 3555543 44467889999998 999885 48899999999999887666655322 1 3222221000 1123
Q ss_pred CHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHH
Q 042753 411 ESDELARLLAQSVDGPRRERLKARELSGAALSAVVKGGSSDRDLNDFI 458 (473)
Q Consensus 411 ~~~~l~~~i~~~l~~~~~~~~~a~~~~~~~~~~~~~~gs~~~~~~~~~ 458 (473)
+.++|.++|+.++++++.++++-+++.+.+-.. .+|.++++.++.++
T Consensus 322 ~~~eL~~~i~~~~~~~~~~~~~~~~~~~~~~~~-~Dg~s~eri~~~I~ 368 (369)
T PF04464_consen 322 NFEELIEAIENIIENPDEYKEKREKFRDKFFKY-NDGNSSERIVNYIF 368 (369)
T ss_dssp SHHHHHHHHTTHHHHHHHTHHHHHHHHHHHSTT---S-HHHHHHHHHH
T ss_pred CHHHHHHHHHhhhhCCHHHHHHHHHHHHHhCCC-CCchHHHHHHHHHh
Confidence 689999999998877645666677777777543 56776666666554
|
They consist of a main chain of phosphodiester-linked polyols and/or sugar moieties attached to peptidoglycan via a linkage unit. CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase is responsible for the polymerisation of the main chain of the teichoic acid by sequential transfer of glycerol-phosphate units from CDP-glycerol to the linkage unit lipid [].; GO: 0047355 CDP-glycerol glycerophosphotransferase activity, 0016020 membrane; PDB: 3L7K_B 3L7L_D 3L7I_A 3L7J_D 3L7M_D. |
| >TIGR02400 trehalose_OtsA alpha,alpha-trehalose-phosphate synthase [UDP-forming] | Back alignment and domain information |
|---|
Probab=86.64 E-value=8.5 Score=38.99 Aligned_cols=102 Identities=20% Similarity=0.156 Sum_probs=65.2
Q ss_pred ecCccHHH---hhhccCccceee---ccC-chhHHHHHhhCCe----EecCcccccchhhHHHHHHHhcceEEeccCCCC
Q 042753 340 RGWSQQVA---ILRHKAVGAFLT---HCG-WNSVLEGVSAGVV----MLTWPMDADQYTNAQLLVDQLGVGIRVGEGTRN 408 (473)
Q Consensus 340 ~~~~pq~~---lL~~~~v~~~It---HgG-~~s~~eal~~GvP----~l~~P~~~DQ~~na~rv~~~~G~G~~l~~~~~~ 408 (473)
...+++.+ ++..+++ |+. +-| ..+..||+++|+| +|+--..+ .+..+ +-|+.++
T Consensus 341 ~~~~~~~el~aly~aaDv--~vv~S~~EG~~Lv~lEamA~g~P~~g~vVlS~~~G----~~~~l----~~gllVn----- 405 (456)
T TIGR02400 341 NRSYDREELMALYRAADV--GLVTPLRDGMNLVAKEYVAAQDPKDGVLILSEFAG----AAQEL----NGALLVN----- 405 (456)
T ss_pred cCCCCHHHHHHHHHhCcE--EEECccccccCccHHHHHHhcCCCCceEEEeCCCC----ChHHh----CCcEEEC-----
Confidence 34556655 4677887 553 345 4588899999999 55543332 22222 3366666
Q ss_pred CCCHHHHHHHHHHHhCCc-HHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHH
Q 042753 409 IPESDELARLLAQSVDGP-RRERLKARELSGAALSAVVKGGSSDRDLNDFIKRI 461 (473)
Q Consensus 409 ~~~~~~l~~~i~~~l~~~-~~~~~~a~~~~~~~~~~~~~~gs~~~~~~~~~~~~ 461 (473)
..+.++++++|.++|+.+ +..+++.+++.+.+. . -+...-++.+++.+
T Consensus 406 P~d~~~lA~aI~~aL~~~~~er~~r~~~~~~~v~----~-~~~~~W~~~~l~~l 454 (456)
T TIGR02400 406 PYDIDGMADAIARALTMPLEEREERHRAMMDKLR----K-NDVQRWREDFLSDL 454 (456)
T ss_pred CCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHh----h-CCHHHHHHHHHHHh
Confidence 457899999999999865 455556666666653 2 45666666666554
|
This enzyme catalyzes the key, penultimate step in biosynthesis of trehalose, a compatible solute made as an osmoprotectant in some species in all three domains of life. The gene symbol OtsA stands for osmotically regulated trehalose synthesis A. Trehalose helps protect against both osmotic and thermal stresses, and is made from two glucose subunits. This model excludes glucosylglycerol-phosphate synthase, an enzyme of an analogous osmoprotectant system in many cyanobacterial strains. This model does not identify archaeal examples, as they are more divergent than glucosylglycerol-phosphate synthase. Sequences that score in the gray zone between the trusted and noise cutoffs include a number of yeast multidomain proteins in which the N-terminal domain may be functionally equivalent to this family. The gray zone also includes the OtsA of Cornyebacterium glutamicum (and related species), shown to be responsib |
| >COG0003 ArsA Predicted ATPase involved in chromosome partitioning [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
Probab=86.00 E-value=11 Score=36.04 Aligned_cols=43 Identities=16% Similarity=0.132 Sum_probs=35.3
Q ss_pred ccEEEEEc-CCCCCChHHHHHHHHHHHhCCCeEEEEeCCCChhh
Q 042753 5 GAHILVYP-FPTSGHIIPLLDLTNRLLTLGLNVTVLITQNNLPL 47 (473)
Q Consensus 5 ~~~Il~~~-~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~ 47 (473)
|+||+|+. =+|-|-..-..++|-.|++.|..|.++++++.+..
T Consensus 1 ~~riv~f~GKGGVGKTT~aaA~A~~lA~~g~kvLlvStDPAhsL 44 (322)
T COG0003 1 MTRIVFFTGKGGVGKTTIAAATAVKLAESGKKVLLVSTDPAHSL 44 (322)
T ss_pred CcEEEEEecCCcccHHHHHHHHHHHHHHcCCcEEEEEeCCCCch
Confidence 57888777 56779999999999999999998888888766443
|
|
| >PRK10964 ADP-heptose:LPS heptosyl transferase I; Provisional | Back alignment and domain information |
|---|
Probab=85.69 E-value=5.1 Score=38.48 Aligned_cols=46 Identities=9% Similarity=0.147 Sum_probs=40.5
Q ss_pred cEEEEEcCCCCCChHHHHHHHHHHHhC--CCeEEEEeCCCChhhhhhh
Q 042753 6 AHILVYPFPTSGHIIPLLDLTNRLLTL--GLNVTVLITQNNLPLLDSL 51 (473)
Q Consensus 6 ~~Il~~~~~~~GH~~p~l~La~~L~~r--Gh~Vt~~~~~~~~~~i~~~ 51 (473)
||||++-..+.|++.-..++.+.|+++ +.+|++++.+.+.+.++..
T Consensus 1 m~ILii~~~~iGD~v~~~p~~~~lk~~~P~a~I~~l~~~~~~~l~~~~ 48 (322)
T PRK10964 1 MRVLIVKTSSMGDVLHTLPALTDAQQAIPGIQFDWVVEEGFAQIPSWH 48 (322)
T ss_pred CeEEEEeccchHHHHhHHHHHHHHHHhCCCCEEEEEECHHHHHHHhcC
Confidence 489999999999999999999999997 9999999998776655533
|
|
| >TIGR02919 accessory Sec system glycosyltransferase GtfB | Back alignment and domain information |
|---|
Probab=85.67 E-value=17 Score=36.52 Aligned_cols=139 Identities=13% Similarity=0.144 Sum_probs=83.3
Q ss_pred CCcEEEEEeCCcccCCHHHHHHHHHHHHh-CCCcEEEEEeCCCccCCcccCCCCchhhHHhhcCCCeEe-ecCcc-H-HH
Q 042753 272 DESVVYVCFGSRYVLTAKQIHELAAALEK-TDVDFVYCVREPDERHASQDCGVLPDGFEDRVAGRGYVI-RGWSQ-Q-VA 347 (473)
Q Consensus 272 ~~~~V~vs~Gs~~~~~~~~~~~~~~al~~-~~~~~i~~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~v-~~~~p-q-~~ 347 (473)
...+++++ ..+.++.+....++ ++.++=...... ..+.+.+...-+|++. ..+.+ + .+
T Consensus 282 ~~~~l~~t-------~s~~I~~i~~Lv~~lPd~~f~Iga~te-----------~s~kL~~L~~y~nvvly~~~~~~~l~~ 343 (438)
T TIGR02919 282 RKQALILT-------NSDQIEHLEEIVQALPDYHFHIAALTE-----------MSSKLMSLDKYDNVKLYPNITTQKIQE 343 (438)
T ss_pred cccEEEEC-------CHHHHHHHHHHHHhCCCcEEEEEecCc-----------ccHHHHHHHhcCCcEEECCcChHHHHH
Confidence 45677775 24455555555555 355554433332 1123322212256554 45566 3 56
Q ss_pred hhhccCccceeeccC--chhHHHHHhhCCeEecCcccccchhhHHHHHHHhcceEEeccCCCCCCCHHHHHHHHHHHhCC
Q 042753 348 ILRHKAVGAFLTHCG--WNSVLEGVSAGVVMLTWPMDADQYTNAQLLVDQLGVGIRVGEGTRNIPESDELARLLAQSVDG 425 (473)
Q Consensus 348 lL~~~~v~~~ItHgG--~~s~~eal~~GvP~l~~P~~~DQ~~na~rv~~~~G~G~~l~~~~~~~~~~~~l~~~i~~~l~~ 425 (473)
++..|++=+-|+||. ..++.||+.+|+|++..=.... +...+. . |-... .-+.+++.++|.++|++
T Consensus 344 ly~~~dlyLdin~~e~~~~al~eA~~~G~pI~afd~t~~---~~~~i~-~---g~l~~-----~~~~~~m~~~i~~lL~d 411 (438)
T TIGR02919 344 LYQTCDIYLDINHGNEILNAVRRAFEYNLLILGFEETAH---NRDFIA-S---ENIFE-----HNEVDQLISKLKDLLND 411 (438)
T ss_pred HHHhccEEEEccccccHHHHHHHHHHcCCcEEEEecccC---Cccccc-C---Cceec-----CCCHHHHHHHHHHHhcC
Confidence 999999988888876 6799999999999998743322 222222 2 43444 34689999999999998
Q ss_pred cHHHHHHHHHHHHHH
Q 042753 426 PRRERLKARELSGAA 440 (473)
Q Consensus 426 ~~~~~~~a~~~~~~~ 440 (473)
++.+.++...-++..
T Consensus 412 ~~~~~~~~~~q~~~a 426 (438)
T TIGR02919 412 PNQFRELLEQQREHA 426 (438)
T ss_pred HHHHHHHHHHHHHHh
Confidence 745555555444443
|
Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus. |
| >COG0438 RfaG Glycosyltransferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=85.47 E-value=32 Score=32.19 Aligned_cols=114 Identities=19% Similarity=0.228 Sum_probs=66.5
Q ss_pred CCCeEeecCcc---HHHhhhccCccceeec---cCch-hHHHHHhhCCeEecCcccccchhhHHHHHHHhcceEEeccCC
Q 042753 334 GRGYVIRGWSQ---QVAILRHKAVGAFLTH---CGWN-SVLEGVSAGVVMLTWPMDADQYTNAQLLVDQLGVGIRVGEGT 406 (473)
Q Consensus 334 ~~nv~v~~~~p---q~~lL~~~~v~~~ItH---gG~~-s~~eal~~GvP~l~~P~~~DQ~~na~rv~~~~G~G~~l~~~~ 406 (473)
..++....+++ ...++..+++ ++.- .|.| ++.||+++|+|++... .......+. .-+.|. +.
T Consensus 256 ~~~v~~~g~~~~~~~~~~~~~~~~--~v~ps~~e~~~~~~~Ea~a~g~pvi~~~----~~~~~e~~~-~~~~g~-~~--- 324 (381)
T COG0438 256 EDNVKFLGYVPDEELAELLASADV--FVLPSLSEGFGLVLLEAMAAGTPVIASD----VGGIPEVVE-DGETGL-LV--- 324 (381)
T ss_pred CCcEEEecccCHHHHHHHHHhCCE--EEeccccccchHHHHHHHhcCCcEEECC----CCChHHHhc-CCCceE-ec---
Confidence 35677788888 3336666765 5555 3554 4599999999996654 333333333 312476 43
Q ss_pred CCCCCHHHHHHHHHHHhCCcHHHHHHHHH-HHHHHHHHHhcCCChHHHHHHHHHHHHhh
Q 042753 407 RNIPESDELARLLAQSVDGPRRERLKARE-LSGAALSAVVKGGSSDRDLNDFIKRINEL 464 (473)
Q Consensus 407 ~~~~~~~~l~~~i~~~l~~~~~~~~~a~~-~~~~~~~~~~~~gs~~~~~~~~~~~~~~~ 464 (473)
.. .+.+++.+++..++++. +..+.... ..+.+ ...-+-+...+.+.+.+.+.
T Consensus 325 ~~-~~~~~~~~~i~~~~~~~-~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~ 377 (381)
T COG0438 325 PP-GDVEELADALEQLLEDP-ELREELGEAARERV----EEEFSWERIAEQLLELYEEL 377 (381)
T ss_pred CC-CCHHHHHHHHHHHhcCH-HHHHHHHHHHHHHH----HHhcCHHHHHHHHHHHHHHH
Confidence 12 27899999999999885 44444433 22222 22344445555666555543
|
|
| >PRK12342 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=85.29 E-value=9.8 Score=35.04 Aligned_cols=99 Identities=16% Similarity=0.052 Sum_probs=57.1
Q ss_pred ChHHH----HHHHHHHHhCCCeEEEEeCCCCh--hh-h-hhhccCCCCCCe-eEEEcCCCCCCCCCChhhHHHHHHHHHH
Q 042753 18 HIIPL----LDLTNRLLTLGLNVTVLITQNNL--PL-L-DSLNANHPSTSL-QSLVLPQPKWPAGSPATRLLKFMRVLRE 88 (473)
Q Consensus 18 H~~p~----l~La~~L~~rGh~Vt~~~~~~~~--~~-i-~~~~~~~~~~~~-~f~~l~~~~~~~~~~~~~~~~~~~~~~~ 88 (473)
-+||+ +..|-+|++.|.+||.++-.+.. .. + +..++- |. +-+.+... .+...+.+
T Consensus 32 ~iNp~D~~AlE~AlrLk~~g~~Vtvls~Gp~~a~~~~l~r~alam----GaD~avli~d~---~~~g~D~~--------- 95 (254)
T PRK12342 32 KISQFDLNAIEAASQLATDGDEIAALTVGGSLLQNSKVRKDVLSR----GPHSLYLVQDA---QLEHALPL--------- 95 (254)
T ss_pred cCChhhHHHHHHHHHHhhcCCEEEEEEeCCChHhHHHHHHHHHHc----CCCEEEEEecC---ccCCCCHH---------
Confidence 46664 45566777679999999876533 22 3 433221 11 12222211 11111100
Q ss_pred HhhHHHHHHHhcCCCCCcEEEeCCCcc------hHHHHHHHhCCCcEEEecc
Q 042753 89 LHYPALLDWFKSHPSPPVAILSDFFLG------WTQGLAAELGLPRVVFSPS 134 (473)
Q Consensus 89 ~~~~~l~~~l~~~~~~pD~VV~D~~~~------~~~~~A~~~giP~v~~~~~ 134 (473)
.....|.+.++.. +||+|++..-+. -+..+|+.+|+|++++...
T Consensus 96 ata~~La~~i~~~--~~DLVl~G~~s~D~~tgqvg~~lA~~Lg~P~vt~v~~ 145 (254)
T PRK12342 96 DTAKALAAAIEKI--GFDLLLFGEGSGDLYAQQVGLLLGELLQLPVINAVSK 145 (254)
T ss_pred HHHHHHHHHHHHh--CCCEEEEcCCcccCCCCCHHHHHHHHhCCCcEeeEEE
Confidence 2234455556667 799999876654 2789999999999997655
|
|
| >PRK13935 stationary phase survival protein SurE; Provisional | Back alignment and domain information |
|---|
Probab=85.15 E-value=11 Score=34.73 Aligned_cols=39 Identities=18% Similarity=0.053 Sum_probs=24.3
Q ss_pred EEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCCCChhh
Q 042753 7 HILVYPFPTSGHIIPLLDLTNRLLTLGLNVTVLITQNNLPL 47 (473)
Q Consensus 7 ~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~ 47 (473)
|||+.-==+. |---+.+|+++|.+ +|+|+++.+...+.-
T Consensus 2 ~ILlTNDDGi-~a~Gi~aL~~~l~~-~~~V~VvAP~~~qSg 40 (253)
T PRK13935 2 NILVTNDDGI-TSPGIIILAEYLSE-KHEVFVVAPDKERSA 40 (253)
T ss_pred eEEEECCCCC-CCHHHHHHHHHHHh-CCcEEEEccCCCCcc
Confidence 6666652222 22236778888865 689988888766443
|
|
| >cd01424 MGS_CPS_II Methylglyoxal synthase-like domain from type II glutamine-dependent carbamoyl phosphate synthetase (CSP) | Back alignment and domain information |
|---|
Probab=84.88 E-value=5.6 Score=31.26 Aligned_cols=83 Identities=16% Similarity=0.163 Sum_probs=56.3
Q ss_pred ChHHHHHHHHHHHhCCCeEEEEeCCCChhhhhhhccCCCCCCeeEEEcCCCCCCCCCChhhHHHHHHHHHHHhhHHHHHH
Q 042753 18 HIIPLLDLTNRLLTLGLNVTVLITQNNLPLLDSLNANHPSTSLQSLVLPQPKWPAGSPATRLLKFMRVLRELHYPALLDW 97 (473)
Q Consensus 18 H~~p~l~La~~L~~rGh~Vt~~~~~~~~~~i~~~~~~~~~~~~~f~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 97 (473)
+-.-++++++.|.+.|+++. +++.....++.. ++....+..+. ...+.+.+.
T Consensus 11 ~k~~~~~~~~~l~~~G~~l~--aT~gT~~~l~~~-------gi~~~~v~~~~-------------------~~~~~i~~~ 62 (110)
T cd01424 11 DKPEAVEIAKRLAELGFKLV--ATEGTAKYLQEA-------GIPVEVVNKVS-------------------EGRPNIVDL 62 (110)
T ss_pred cHhHHHHHHHHHHHCCCEEE--EchHHHHHHHHc-------CCeEEEEeecC-------------------CCchhHHHH
Confidence 55678899999999999973 455566666665 55544332110 122556777
Q ss_pred HhcCCCCCcEEEeCCCc-------chHHHHHHHhCCCcEE
Q 042753 98 FKSHPSPPVAILSDFFL-------GWTQGLAAELGLPRVV 130 (473)
Q Consensus 98 l~~~~~~pD~VV~D~~~-------~~~~~~A~~~giP~v~ 130 (473)
+++. ++|+||.-... +.....|-.+|||+++
T Consensus 63 i~~~--~id~vIn~~~~~~~~~~~~~iRR~Av~~~ipl~T 100 (110)
T cd01424 63 IKNG--EIQLVINTPSGKRAIRDGFSIRRAALEYKVPYFT 100 (110)
T ss_pred HHcC--CeEEEEECCCCCccCccHHHHHHHHHHhCCCEEe
Confidence 8888 99999985322 3455778899999885
|
CSP, a CarA and CarB heterodimer, catalyzes the production of carbamoyl phosphate which is subsequently employed in the metabolic pathways responsible for the synthesis of pyrimidine nucleotides or arginine. The MGS-like domain is the C-terminal domain of CarB and appears to play a regulatory role in CPS function by binding allosteric effector molecules, including UMP and ornithine. |
| >PF01012 ETF: Electron transfer flavoprotein domain; InterPro: IPR014730 Electron transfer flavoproteins (ETFs) serve as specific electron acceptors for primary dehydrogenases, transferring the electrons to terminal respiratory systems | Back alignment and domain information |
|---|
Probab=84.88 E-value=3.7 Score=35.02 Aligned_cols=111 Identities=24% Similarity=0.229 Sum_probs=63.3
Q ss_pred EEEEEcCCCCCChHH----HHHHHHHHHhC-CCeEEEEeCCC---ChhhhhhhccCCCCCCe-eEEEcCCCCCCCCCChh
Q 042753 7 HILVYPFPTSGHIIP----LLDLTNRLLTL-GLNVTVLITQN---NLPLLDSLNANHPSTSL-QSLVLPQPKWPAGSPAT 77 (473)
Q Consensus 7 ~Il~~~~~~~GH~~p----~l~La~~L~~r-Gh~Vt~~~~~~---~~~~i~~~~~~~~~~~~-~f~~l~~~~~~~~~~~~ 77 (473)
+|+++.-...|.++| .+..|++|.+. |.+|+.++..+ ..+.++..... .|. +.+.+..+......
T Consensus 1 ~ilv~~e~~~~~l~~~~~e~l~~A~~La~~~g~~v~av~~G~~~~~~~~l~~~l~~---~G~d~v~~~~~~~~~~~~--- 74 (164)
T PF01012_consen 1 NILVFAEHRDGRLNPVSLEALEAARRLAEALGGEVTAVVLGPAEEAAEALRKALAK---YGADKVYHIDDPALAEYD--- 74 (164)
T ss_dssp EEEEEE-EETCEE-HHHHHHHHHHHHHHHCTTSEEEEEEEETCCCHHHHHHHHHHS---TTESEEEEEE-GGGTTC----
T ss_pred CEEEEEECCCCccCHHHHHHHHHHHHHHhhcCCeEEEEEEecchhhHHHHhhhhhh---cCCcEEEEecCccccccC---
Confidence 355555444566666 67889999985 88888877653 22232222110 133 33444422111111
Q ss_pred hHHHHHHHHHHHhhHHHHHHHhcCCCCCcEEEeCCCcc---hHHHHHHHhCCCcEEEecc
Q 042753 78 RLLKFMRVLRELHYPALLDWFKSHPSPPVAILSDFFLG---WTQGLAAELGLPRVVFSPS 134 (473)
Q Consensus 78 ~~~~~~~~~~~~~~~~l~~~l~~~~~~pD~VV~D~~~~---~~~~~A~~~giP~v~~~~~ 134 (473)
.......+.+++++. +||+|++..... .+..+|.++|.|++.-...
T Consensus 75 ---------~~~~a~~l~~~~~~~--~~~lVl~~~t~~g~~la~~lA~~L~~~~v~~v~~ 123 (164)
T PF01012_consen 75 ---------PEAYADALAELIKEE--GPDLVLFGSTSFGRDLAPRLAARLGAPLVTDVTD 123 (164)
T ss_dssp ---------HHHHHHHHHHHHHHH--T-SEEEEESSHHHHHHHHHHHHHHT-EEEEEEEE
T ss_pred ---------HHHHHHHHHHHHHhc--CCCEEEEcCcCCCCcHHHHHHHHhCCCccceEEE
Confidence 113446667777777 999999887655 4568999999999986554
|
They can be functionally classified into constitutive, "housekeeping" ETFs, mainly involved in the oxidation of fatty acids (Group I), and ETFs produced by some prokaryotes under specific growth conditions, receiving electrons only from the oxidation of specific substrates (Group II) []. ETFs are heterodimeric proteins composed of an alpha and beta subunit, and contain an FAD cofactor and AMP [, , , , ]. ETF consists of three domains: domains I and II are formed by the N- and C-terminal portions of the alpha subunit, respectively, while domain III is formed by the beta subunit. Domains I and III share an almost identical alpha-beta-alpha sandwich fold, while domain II forms an alpha-beta-alpha sandwich similar to that of bacterial flavodoxins. FAD is bound in a cleft between domains II and III, while domain III binds the AMP molecule. Interactions between domains I and III stabilise the protein, forming a shallow bowl where domain II resides. This entry represents the N-terminal domain of both the alpha and beta subunits from Group I and Group II ETFs.; PDB: 1EFP_B 3FET_B 3IH5_B 2A1T_S 1EFV_B 1T9G_S 2A1U_B 1O96_E 1O94_C 3CLU_C .... |
| >PF10093 DUF2331: Uncharacterized protein conserved in bacteria (DUF2331); InterPro: IPR016633 This entry describes a conserved hypothetical protein that typically is encoded next to the gene efp for translation elongation factor P | Back alignment and domain information |
|---|
Probab=83.98 E-value=44 Score=32.59 Aligned_cols=34 Identities=18% Similarity=0.194 Sum_probs=28.6
Q ss_pred EEEcCCCCCChHHHHHHHHHHHhC-CCeEEEEeCC
Q 042753 9 LVYPFPTSGHIIPLLDLTNRLLTL-GLNVTVLITQ 42 (473)
Q Consensus 9 l~~~~~~~GH~~p~l~La~~L~~r-Gh~Vt~~~~~ 42 (473)
.+-..==+|++-.+-.||+.|+++ |++|++.+.+
T Consensus 4 FC~VIDNfGDIGVcWRLArqLa~e~g~~VrLwvDd 38 (374)
T PF10093_consen 4 FCRVIDNFGDIGVCWRLARQLAAEHGQQVRLWVDD 38 (374)
T ss_pred eEEeccCCcchHHHHHHHHHHHHHhCCeEEEEECC
Confidence 333445579999999999999997 9999999976
|
The function is unknown. |
| >COG4370 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=83.79 E-value=7.5 Score=36.26 Aligned_cols=108 Identities=17% Similarity=0.192 Sum_probs=66.6
Q ss_pred eecCccHHHhhhccCccceeeccCchhHHH-HHhhCCeEecCcccccchhh--HHHHHHHhcceEEeccCCCCCCCHHHH
Q 042753 339 IRGWSQQVAILRHKAVGAFLTHCGWNSVLE-GVSAGVVMLTWPMDADQYTN--AQLLVDQLGVGIRVGEGTRNIPESDEL 415 (473)
Q Consensus 339 v~~~~pq~~lL~~~~v~~~ItHgG~~s~~e-al~~GvP~l~~P~~~DQ~~n--a~rv~~~~G~G~~l~~~~~~~~~~~~l 415 (473)
+..|-...++|.++++ .|-- .||..| ++=.|+|+|.+|-.+-|+.- |.|=.+-+|+.+.+- +..++.-
T Consensus 299 ~lsqqsfadiLH~ada--algm--AGTAtEQavGLGkPvi~fPg~GPQy~pgFA~rQ~rLLG~sltlv-----~~~aq~a 369 (412)
T COG4370 299 WLSQQSFADILHAADA--ALGM--AGTATEQAVGLGKPVIGFPGQGPQYNPGFAERQQRLLGASLTLV-----RPEAQAA 369 (412)
T ss_pred EEeHHHHHHHHHHHHH--HHHh--ccchHHHhhccCCceeecCCCCCCcChHHHHHHHHHhcceeeec-----CCchhhH
Confidence 4466677788888775 3332 344444 56789999999999999764 455555567777666 2334444
Q ss_pred HHHHHHHhCCcHHHHHHHHHHH-HHHHHHHhcCCChHHHHHHHHHHHHhh
Q 042753 416 ARLLAQSVDGPRRERLKARELS-GAALSAVVKGGSSDRDLNDFIKRINEL 464 (473)
Q Consensus 416 ~~~i~~~l~~~~~~~~~a~~~~-~~~~~~~~~~gs~~~~~~~~~~~~~~~ 464 (473)
..+.+++|.|+ .+.++++.=. +++ - +..++..+.|.+.++
T Consensus 370 ~~~~q~ll~dp-~r~~air~nGqrRi----G----qaGaa~rIAe~l~e~ 410 (412)
T COG4370 370 AQAVQELLGDP-QRLTAIRHNGQRRI----G----QAGAARRIAEELGEM 410 (412)
T ss_pred HHHHHHHhcCh-HHHHHHHhcchhhc----c----CcchHHHHHHHHHHh
Confidence 44555699998 7776665322 222 1 222555666666554
|
|
| >cd03788 GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a glycosyltransferase that catalyses the synthesis of alpha,alpha-1,1-trehalose-6-phosphate from glucose-6-phosphate using a UDP-glucose donor | Back alignment and domain information |
|---|
Probab=83.55 E-value=6.5 Score=39.94 Aligned_cols=102 Identities=18% Similarity=0.135 Sum_probs=59.0
Q ss_pred eecCccHHH---hhhccCccceee---ccCc-hhHHHHHhhCCe----EecCcccccchhhHHHHHHHhcceEEeccCCC
Q 042753 339 IRGWSQQVA---ILRHKAVGAFLT---HCGW-NSVLEGVSAGVV----MLTWPMDADQYTNAQLLVDQLGVGIRVGEGTR 407 (473)
Q Consensus 339 v~~~~pq~~---lL~~~~v~~~It---HgG~-~s~~eal~~GvP----~l~~P~~~DQ~~na~rv~~~~G~G~~l~~~~~ 407 (473)
..+++++.+ ++..+++ ||. .-|+ .+++||+++|+| +|+--..+ .+... .-|+.++
T Consensus 345 ~~g~v~~~el~~~y~~aDv--~v~pS~~Eg~~lv~lEAma~g~p~~g~vV~S~~~G----~~~~~----~~g~lv~---- 410 (460)
T cd03788 345 LYRSLPREELAALYRAADV--ALVTPLRDGMNLVAKEYVACQDDDPGVLILSEFAG----AAEEL----SGALLVN---- 410 (460)
T ss_pred EeCCCCHHHHHHHHHhccE--EEeCccccccCcccceeEEEecCCCceEEEecccc----chhhc----CCCEEEC----
Confidence 346777655 5777887 553 3454 477999999999 44432211 11111 2366665
Q ss_pred CCCCHHHHHHHHHHHhCCc-HHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHH
Q 042753 408 NIPESDELARLLAQSVDGP-RRERLKARELSGAALSAVVKGGSSDRDLNDFIKR 460 (473)
Q Consensus 408 ~~~~~~~l~~~i~~~l~~~-~~~~~~a~~~~~~~~~~~~~~gs~~~~~~~~~~~ 460 (473)
.-+.+++.++|.++++++ +..++..++.++.+. .-+.+.-++.++..
T Consensus 411 -p~d~~~la~ai~~~l~~~~~e~~~~~~~~~~~v~-----~~~~~~w~~~~l~~ 458 (460)
T cd03788 411 -PYDIDEVADAIHRALTMPLEERRERHRKLREYVR-----THDVQAWANSFLDD 458 (460)
T ss_pred -CCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH-----hCCHHHHHHHHHHh
Confidence 357899999999999876 223333333333332 24455555555544
|
It is a key enzyme in the trehalose synthesis pathway. Trehalose is a nonreducing disaccharide present in a wide variety of organisms and may serve as a source of energy and carbon. It is characterized most notably in insect, plant, and microbial cells. Its production is often associated with a variety of stress conditions, including desiccation, dehydration, heat, cold, and oxidation. This family represents the catalytic domain of the TPS. Some members of this domain family coexist with a C-terminal trehalose phosphatase domain. |
| >PF09314 DUF1972: Domain of unknown function (DUF1972); InterPro: IPR015393 This domain is functionally uncharacterised and found in bacterial glycosyltransferases and rhamnosyltransferases | Back alignment and domain information |
|---|
Probab=83.52 E-value=29 Score=30.20 Aligned_cols=59 Identities=22% Similarity=0.390 Sum_probs=37.4
Q ss_pred ccEEEEEc---CCC-CCCh-HHHHHHHHHHHhCCCeEEEEeCCCChhhhhhhccCCCCCCeeEEEcCCC
Q 042753 5 GAHILVYP---FPT-SGHI-IPLLDLTNRLLTLGLNVTVLITQNNLPLLDSLNANHPSTSLQSLVLPQP 68 (473)
Q Consensus 5 ~~~Il~~~---~~~-~GH~-~p~l~La~~L~~rGh~Vt~~~~~~~~~~i~~~~~~~~~~~~~f~~l~~~ 68 (473)
|.||.++- .|+ +|=+ .-...|+..|+++||+||+.+.......-.. ...+++...+|.+
T Consensus 1 mkkIaIiGtrGIPa~YGGfET~ve~L~~~l~~~g~~v~Vyc~~~~~~~~~~-----~y~gv~l~~i~~~ 64 (185)
T PF09314_consen 1 MKKIAIIGTRGIPARYGGFETFVEELAPRLVSKGIDVTVYCRSDYYPYKEF-----EYNGVRLVYIPAP 64 (185)
T ss_pred CceEEEEeCCCCCcccCcHHHHHHHHHHHHhcCCceEEEEEccCCCCCCCc-----ccCCeEEEEeCCC
Confidence 78887665 343 3444 3355677888888999999998755422111 1246777777754
|
|
| >PRK14099 glycogen synthase; Provisional | Back alignment and domain information |
|---|
Probab=83.40 E-value=17 Score=37.21 Aligned_cols=38 Identities=24% Similarity=0.227 Sum_probs=29.2
Q ss_pred ccEEEEEcC---C---CCCChHHHHHHHHHHHhCCCeEEEEeCC
Q 042753 5 GAHILVYPF---P---TSGHIIPLLDLTNRLLTLGLNVTVLITQ 42 (473)
Q Consensus 5 ~~~Il~~~~---~---~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 42 (473)
.+|||+++. | +.|=-...-+|.++|+++||+|.++.+.
T Consensus 3 ~~~il~v~~E~~p~~k~ggl~dv~~~lp~~l~~~g~~v~v~~P~ 46 (485)
T PRK14099 3 PLRVLSVASEIFPLIKTGGLADVAGALPAALKAHGVEVRTLVPG 46 (485)
T ss_pred CcEEEEEEeccccccCCCcHHHHHHHHHHHHHHCCCcEEEEeCC
Confidence 478988762 2 2255566788999999999999999984
|
|
| >PF04413 Glycos_transf_N: 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase); InterPro: IPR007507 This is a domain found in proteins that transfer activated sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides | Back alignment and domain information |
|---|
Probab=82.93 E-value=3.1 Score=36.39 Aligned_cols=101 Identities=16% Similarity=0.120 Sum_probs=51.3
Q ss_pred EEEEEcCCCCCChHHHHHHHHHHHhC--CCeEEEEeCCCChhh-hhhhccCCCCCCeeEEEcCCCCCCCCCChhhHHHHH
Q 042753 7 HILVYPFPTSGHIIPLLDLTNRLLTL--GLNVTVLITQNNLPL-LDSLNANHPSTSLQSLVLPQPKWPAGSPATRLLKFM 83 (473)
Q Consensus 7 ~Il~~~~~~~GH~~p~l~La~~L~~r--Gh~Vt~~~~~~~~~~-i~~~~~~~~~~~~~f~~l~~~~~~~~~~~~~~~~~~ 83 (473)
+++.+-..+-|-++-..+|+++|.++ |++|.+-++...... +.+... +.+...-+|.+
T Consensus 22 ~~iWiHa~SvGE~~a~~~Li~~l~~~~p~~~illT~~T~tg~~~~~~~~~----~~v~~~~~P~D--------------- 82 (186)
T PF04413_consen 22 PLIWIHAASVGEVNAARPLIKRLRKQRPDLRILLTTTTPTGREMARKLLP----DRVDVQYLPLD--------------- 82 (186)
T ss_dssp T-EEEE-SSHHHHHHHHHHHHHHTT---TS-EEEEES-CCHHHHHHGG-G----GG-SEEE---S---------------
T ss_pred CcEEEEECCHHHHHHHHHHHHHHHHhCCCCeEEEEecCCchHHHHHHhCC----CCeEEEEeCcc---------------
Confidence 44444455679999999999999997 999999887655433 333311 12333334431
Q ss_pred HHHHHHhhHHHHHHHhcCCCCCcEEEeCCCcch--HHHHHHHhCCCcEEEecc
Q 042753 84 RVLRELHYPALLDWFKSHPSPPVAILSDFFLGW--TQGLAAELGLPRVVFSPS 134 (473)
Q Consensus 84 ~~~~~~~~~~l~~~l~~~~~~pD~VV~D~~~~~--~~~~A~~~giP~v~~~~~ 134 (473)
......+++..+ +||++|.-....| .+..|++.|||.+.+..-
T Consensus 83 ------~~~~~~rfl~~~--~P~~~i~~EtElWPnll~~a~~~~ip~~LvNar 127 (186)
T PF04413_consen 83 ------FPWAVRRFLDHW--RPDLLIWVETELWPNLLREAKRRGIPVVLVNAR 127 (186)
T ss_dssp ------SHHHHHHHHHHH----SEEEEES----HHHHHH-----S-EEEEEE-
T ss_pred ------CHHHHHHHHHHh--CCCEEEEEccccCHHHHHHHhhcCCCEEEEeee
Confidence 113446667778 8998886555444 347778889999887443
|
Proteins bearing this domain transfer UDP, ADP, GDP or CMP linked sugars. This region is flanked at the N terminus by a signal peptide and at the C terminus by a glycosyl transferase group 1 domain (IPR001296 from INTERPRO). The eukaryotic glycogen synthases may be distant members of this bacterial family [].; GO: 0005529 sugar binding, 0016740 transferase activity, 0005975 carbohydrate metabolic process; PDB: 2XCI_A 2XCU_B. |
| >COG1703 ArgK Putative periplasmic protein kinase ArgK and related GTPases of G3E family [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=82.72 E-value=8.6 Score=35.97 Aligned_cols=111 Identities=17% Similarity=0.106 Sum_probs=69.3
Q ss_pred cEE-EEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCCCChhhhhhhccC--------CCCCCeeEEEcCCCCCCCCCCh
Q 042753 6 AHI-LVYPFPTSGHIIPLLDLTNRLLTLGLNVTVLITQNNLPLLDSLNAN--------HPSTSLQSLVLPQPKWPAGSPA 76 (473)
Q Consensus 6 ~~I-l~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~i~~~~~~--------~~~~~~~f~~l~~~~~~~~~~~ 76 (473)
+++ .+.-.|+-|--.-.-.|.++|.++||+|-++..++..++.-.++-. ...+++=+.++| ..
T Consensus 51 a~viGITG~PGaGKSTli~~L~~~l~~~G~rVaVlAVDPSSp~TGGsiLGDRiRM~~~~~~~~vFiRs~~--------sr 122 (323)
T COG1703 51 AHVIGITGVPGAGKSTLIEALGRELRERGHRVAVLAVDPSSPFTGGSILGDRIRMQRLAVDPGVFIRSSP--------SR 122 (323)
T ss_pred CcEEEecCCCCCchHHHHHHHHHHHHHCCcEEEEEEECCCCCCCCccccccHhhHHhhccCCCeEEeecC--------CC
Confidence 544 5878999999999999999999999999999987665443333210 112333333322 12
Q ss_pred hhHHHHHHHHHHHhhHHHHHHHhcCCCCCcEEEeCCCcc--hHHHHHHHhCCCcEEE
Q 042753 77 TRLLKFMRVLRELHYPALLDWFKSHPSPPVAILSDFFLG--WTQGLAAELGLPRVVF 131 (473)
Q Consensus 77 ~~~~~~~~~~~~~~~~~l~~~l~~~~~~pD~VV~D~~~~--~~~~~A~~~giP~v~~ 131 (473)
..+........ ....+++.. ++|+||++..-. .=..++...++=.+..
T Consensus 123 G~lGGlS~at~-----~~i~~ldAa--G~DvIIVETVGvGQsev~I~~~aDt~~~v~ 172 (323)
T COG1703 123 GTLGGLSRATR-----EAIKLLDAA--GYDVIIVETVGVGQSEVDIANMADTFLVVM 172 (323)
T ss_pred ccchhhhHHHH-----HHHHHHHhc--CCCEEEEEecCCCcchhHHhhhcceEEEEe
Confidence 22233333332 334556667 999999998755 2356666666654443
|
|
| >COG0052 RpsB Ribosomal protein S2 [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
Probab=82.38 E-value=20 Score=32.45 Aligned_cols=33 Identities=21% Similarity=0.234 Sum_probs=24.5
Q ss_pred CCcEEEe-CCCcc-hHHHHHHHhCCCcEEEecchH
Q 042753 104 PPVAILS-DFFLG-WTQGLAAELGLPRVVFSPSGA 136 (473)
Q Consensus 104 ~pD~VV~-D~~~~-~~~~~A~~~giP~v~~~~~~~ 136 (473)
-||++|+ |+..- -+..=|.++|||+|.++-..+
T Consensus 156 ~Pd~l~ViDp~~e~iAv~EA~klgIPVvAlvDTn~ 190 (252)
T COG0052 156 LPDVLFVIDPRKEKIAVKEANKLGIPVVALVDTNC 190 (252)
T ss_pred CCCEEEEeCCcHhHHHHHHHHHcCCCEEEEecCCC
Confidence 3998874 54433 577889999999999876644
|
|
| >PRK05647 purN phosphoribosylglycinamide formyltransferase; Reviewed | Back alignment and domain information |
|---|
Probab=82.23 E-value=13 Score=33.00 Aligned_cols=108 Identities=14% Similarity=0.122 Sum_probs=56.6
Q ss_pred ccEEEEEcCCCCCChHHHHHHHHHHHhC--CCeEEEEeCCCChhhhhhhccCCCCCCeeEEEcCCCCCCCCCChhhHHHH
Q 042753 5 GAHILVYPFPTSGHIIPLLDLTNRLLTL--GLNVTVLITQNNLPLLDSLNANHPSTSLQSLVLPQPKWPAGSPATRLLKF 82 (473)
Q Consensus 5 ~~~Il~~~~~~~GH~~p~l~La~~L~~r--Gh~Vt~~~~~~~~~~i~~~~~~~~~~~~~f~~l~~~~~~~~~~~~~~~~~ 82 (473)
|+||+++..+. |+ -+.++.+.+.+. +++|.++.+......+.+... ..++.+..++... +..
T Consensus 1 m~ki~vl~sg~-gs--~~~~ll~~~~~~~~~~~I~~vvs~~~~~~~~~~a~---~~gIp~~~~~~~~---~~~------- 64 (200)
T PRK05647 1 MKRIVVLASGN-GS--NLQAIIDACAAGQLPAEIVAVISDRPDAYGLERAE---AAGIPTFVLDHKD---FPS------- 64 (200)
T ss_pred CceEEEEEcCC-Ch--hHHHHHHHHHcCCCCcEEEEEEecCccchHHHHHH---HcCCCEEEECccc---cCc-------
Confidence 78998887755 33 345777778775 477887655432122211110 1256665544211 100
Q ss_pred HHHHHHHhhHHHHHHHhcCCCCCcEEEeCCCcc-hHHHHHHHhCCCcEEEecc
Q 042753 83 MRVLRELHYPALLDWFKSHPSPPVAILSDFFLG-WTQGLAAELGLPRVVFSPS 134 (473)
Q Consensus 83 ~~~~~~~~~~~l~~~l~~~~~~pD~VV~D~~~~-~~~~~A~~~giP~v~~~~~ 134 (473)
.....+.+.+.+++. +||++|+-.+.. ....+-....--++-++++
T Consensus 65 ----~~~~~~~~~~~l~~~--~~D~iv~~~~~~ii~~~~l~~~~~~~iNiHps 111 (200)
T PRK05647 65 ----REAFDAALVEALDAY--QPDLVVLAGFMRILGPTFVSAYEGRIINIHPS 111 (200)
T ss_pred ----hhHhHHHHHHHHHHh--CcCEEEhHHhhhhCCHHHHhhccCCEEEEeCc
Confidence 113345667788888 999999854422 2333333333334444444
|
|
| >COG3660 Predicted nucleoside-diphosphate-sugar epimerase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=82.15 E-value=41 Score=30.91 Aligned_cols=78 Identities=14% Similarity=0.181 Sum_probs=50.9
Q ss_pred HHHHHHhCCCcEEEEEeCCCccCCcccCCCCchhhHHhhcCCCeEe-----ecCccHHHhhhccCccceeeccCchhHHH
Q 042753 294 LAAALEKTDVDFVYCVREPDERHASQDCGVLPDGFEDRVAGRGYVI-----RGWSQQVAILRHKAVGAFLTHCGWNSVLE 368 (473)
Q Consensus 294 ~~~al~~~~~~~i~~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~v-----~~~~pq~~lL~~~~v~~~ItHgG~~s~~e 368 (473)
+.+.+++.+..|+.+.+... ++.+-.-+.++......++ .++=|+.++|+.++. .++|--..|-..|
T Consensus 189 l~k~l~~~g~~~lisfSRRT-------p~~~~s~l~~~l~s~~~i~w~~~d~g~NPY~~~La~Ady-ii~TaDSinM~sE 260 (329)
T COG3660 189 LVKILENQGGSFLISFSRRT-------PDTVKSILKNNLNSSPGIVWNNEDTGYNPYIDMLAAADY-IISTADSINMCSE 260 (329)
T ss_pred HHHHHHhCCceEEEEeecCC-------cHHHHHHHHhccccCceeEeCCCCCCCCchHHHHhhcce-EEEecchhhhhHH
Confidence 55566778899998887653 1111122222222222222 245599999998886 5677888888999
Q ss_pred HHhhCCeEecC
Q 042753 369 GVSAGVVMLTW 379 (473)
Q Consensus 369 al~~GvP~l~~ 379 (473)
|.+.|+|+.++
T Consensus 261 AasTgkPv~~~ 271 (329)
T COG3660 261 AASTGKPVFIL 271 (329)
T ss_pred HhccCCCeEEE
Confidence 99999998553
|
|
| >PF02374 ArsA_ATPase: Anion-transporting ATPase; PDB: 2WOO_A 3IBG_B 3SJA_A 3H84_B 3SJD_A 3ZS9_A 3A37_A 2WOJ_A 3SJC_B 3A36_B | Back alignment and domain information |
|---|
Probab=81.07 E-value=5.7 Score=37.83 Aligned_cols=42 Identities=19% Similarity=0.140 Sum_probs=33.7
Q ss_pred cEEEEEc-CCCCCChHHHHHHHHHHHhCCCeEEEEeCCCChhh
Q 042753 6 AHILVYP-FPTSGHIIPLLDLTNRLLTLGLNVTVLITQNNLPL 47 (473)
Q Consensus 6 ~~Il~~~-~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~ 47 (473)
+|++|+. -+|-|-..-..++|-.++++|++|.++++++.+..
T Consensus 1 ~r~~~~~GKGGVGKTT~aaA~A~~~A~~G~rtLlvS~Dpa~~L 43 (305)
T PF02374_consen 1 MRILFFGGKGGVGKTTVAAALALALARRGKRTLLVSTDPAHSL 43 (305)
T ss_dssp -SEEEEEESTTSSHHHHHHHHHHHHHHTTS-EEEEESSTTTHH
T ss_pred CeEEEEecCCCCCcHHHHHHHHHHHhhCCCCeeEeecCCCccH
Confidence 4666555 66779999999999999999999999999877543
|
... |
| >cd02067 B12-binding B12 binding domain (B12-BD) | Back alignment and domain information |
|---|
Probab=81.04 E-value=3 Score=33.29 Aligned_cols=42 Identities=17% Similarity=0.108 Sum_probs=35.8
Q ss_pred EEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCCCChhhh
Q 042753 7 HILVYPFPTSGHIIPLLDLTNRLLTLGLNVTVLITQNNLPLL 48 (473)
Q Consensus 7 ~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~i 48 (473)
||++.+.++-.|.....-++..|.++|++|+++......+.+
T Consensus 1 ~vl~~~~~~e~H~lG~~~~~~~l~~~G~~V~~lg~~~~~~~l 42 (119)
T cd02067 1 KVVIATVGGDGHDIGKNIVARALRDAGFEVIDLGVDVPPEEI 42 (119)
T ss_pred CEEEEeeCCchhhHHHHHHHHHHHHCCCEEEECCCCCCHHHH
Confidence 588999999999999999999999999999998865444333
|
This domain binds different cobalamid derivates, like B12 (adenosylcobamide) or methylcobalamin or methyl-Co(III) 5-hydroxybenzimidazolylcobamide, it is found in several enzymes, such as glutamate mutase, methionine synthase and methylmalonyl-CoA mutase. Cobalamin undergoes a conformational change on binding the protein; the dimethylbenzimidazole group, which is coordinated to the cobalt in the free cofactor, moves away from the corrin and is replaced by a histidine contributed by the protein. The sequence Asp-X-His-X-X-Gly, which contains this histidine ligand, is conserved in many cobalamin-binding proteins. |
| >cd00532 MGS-like MGS-like domain | Back alignment and domain information |
|---|
Probab=81.01 E-value=7.9 Score=30.60 Aligned_cols=84 Identities=13% Similarity=0.052 Sum_probs=54.1
Q ss_pred ChHHHHHHHHHHHhCCCeEEEEeCCCChhhhhhhccCCCCCCeeEEEcCCCCCCCCCChhhHHHHHHHHHHHhhHHHHHH
Q 042753 18 HIIPLLDLTNRLLTLGLNVTVLITQNNLPLLDSLNANHPSTSLQSLVLPQPKWPAGSPATRLLKFMRVLRELHYPALLDW 97 (473)
Q Consensus 18 H~~p~l~La~~L~~rGh~Vt~~~~~~~~~~i~~~~~~~~~~~~~f~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 97 (473)
+=.-++.+|+.|.+.|+++ ++++.....++.. |+....+.... ++ ..+++.+.
T Consensus 10 ~K~~~~~~a~~l~~~G~~i--~AT~gTa~~L~~~-------Gi~~~~v~~~~-~~-----------------g~~~i~~~ 62 (112)
T cd00532 10 VKAMLVDLAPKLSSDGFPL--FATGGTSRVLADA-------GIPVRAVSKRH-ED-----------------GEPTVDAA 62 (112)
T ss_pred cHHHHHHHHHHHHHCCCEE--EECcHHHHHHHHc-------CCceEEEEecC-CC-----------------CCcHHHHH
Confidence 3455789999999999987 3555566666665 45544332111 00 23556777
Q ss_pred Hhc-CCCCCcEEEeCC--Cc--------chHHHHHHHhCCCcEE
Q 042753 98 FKS-HPSPPVAILSDF--FL--------GWTQGLAAELGLPRVV 130 (473)
Q Consensus 98 l~~-~~~~pD~VV~D~--~~--------~~~~~~A~~~giP~v~ 130 (473)
+++ . ++|+||.-. .. +.....|-.++||+++
T Consensus 63 i~~~g--~idlVIn~~~~~~~~~~~~dg~~iRR~A~~~~Ip~~T 104 (112)
T cd00532 63 IAEKG--KFDVVINLRDPRRDRCTDEDGTALLRLARLYKIPVTT 104 (112)
T ss_pred HhCCC--CEEEEEEcCCCCcccccCCChHHHHHHHHHcCCCEEE
Confidence 777 7 999999732 22 1234678889999877
|
This domain composes the whole protein of methylglyoxal synthetase, which catalyzes the enolization of dihydroxyacetone phosphate (DHAP) to produce methylglyoxal. The family also includes the C-terminal domain in carbamoyl phosphate synthetase (CPS) where it catalyzes the last phosphorylation of a coaboxyphosphate intermediate to form the product carbamoyl phosphate and may also play a regulatory role. This family also includes inosine monophosphate cyclohydrolase. The known structures in this family show a common phosphate binding site. |
| >PRK06718 precorrin-2 dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=80.31 E-value=18 Score=32.05 Aligned_cols=146 Identities=14% Similarity=0.009 Sum_probs=81.7
Q ss_pred CCCcEEEEEeCCcccCCHHHHHHHHHHHHhCCCcEEEEEeCCCccCCcccCCCCchhhHHhhcCCCeEeecCccHHHhhh
Q 042753 271 RDESVVYVCFGSRYVLTAKQIHELAAALEKTDVDFVYCVREPDERHASQDCGVLPDGFEDRVAGRGYVIRGWSQQVAILR 350 (473)
Q Consensus 271 ~~~~~V~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~v~~~~pq~~lL~ 350 (473)
.+++++.|+.|.++. ..+..|.+.+..+.++-+. +.+.+.+......+.......+..-+.
T Consensus 9 ~~k~vLVIGgG~va~-------~ka~~Ll~~ga~V~VIs~~------------~~~~l~~l~~~~~i~~~~~~~~~~~l~ 69 (202)
T PRK06718 9 SNKRVVIVGGGKVAG-------RRAITLLKYGAHIVVISPE------------LTENLVKLVEEGKIRWKQKEFEPSDIV 69 (202)
T ss_pred CCCEEEEECCCHHHH-------HHHHHHHHCCCeEEEEcCC------------CCHHHHHHHhCCCEEEEecCCChhhcC
Confidence 467888888887762 3456666777776655332 113333322223344444444555677
Q ss_pred ccCccceeeccCchhHHHHHh----hCCeEecCcccccchhhHHH-----HHHHhcceEEeccCCCCCCCHHHHHHHHHH
Q 042753 351 HKAVGAFLTHCGWNSVLEGVS----AGVVMLTWPMDADQYTNAQL-----LVDQLGVGIRVGEGTRNIPESDELARLLAQ 421 (473)
Q Consensus 351 ~~~v~~~ItHgG~~s~~eal~----~GvP~l~~P~~~DQ~~na~r-----v~~~~G~G~~l~~~~~~~~~~~~l~~~i~~ 421 (473)
.+++ +|.--+.-.+.+.++ .|+++-+ .|.+..+.. +.+- ++-+.+..+...-.-+..|++.|.+
T Consensus 70 ~adl--ViaaT~d~elN~~i~~~a~~~~lvn~----~d~~~~~~f~~Pa~~~~g-~l~iaIsT~G~sP~la~~lr~~ie~ 142 (202)
T PRK06718 70 DAFL--VIAATNDPRVNEQVKEDLPENALFNV----ITDAESGNVVFPSALHRG-KLTISVSTDGASPKLAKKIRDELEA 142 (202)
T ss_pred CceE--EEEcCCCHHHHHHHHHHHHhCCcEEE----CCCCccCeEEEeeEEEcC-CeEEEEECCCCChHHHHHHHHHHHH
Confidence 7776 888777777777665 3554433 355444332 2212 3444444211344445677778877
Q ss_pred HhCCc-HHHHHHHHHHHHHHHH
Q 042753 422 SVDGP-RRERLKARELSGAALS 442 (473)
Q Consensus 422 ~l~~~-~~~~~~a~~~~~~~~~ 442 (473)
++..+ ..+-+.+.++++.+++
T Consensus 143 ~~~~~~~~~~~~~~~~R~~~k~ 164 (202)
T PRK06718 143 LYDESYESYIDFLYECRQKIKE 164 (202)
T ss_pred HcchhHHHHHHHHHHHHHHHHH
Confidence 77433 4666777777777764
|
|
| >PF02441 Flavoprotein: Flavoprotein; InterPro: IPR003382 This entry contains a diverse range of flavoprotein enzymes, including epidermin biosynthesis protein, EpiD, which has been shown to be a flavoprotein that binds FMN [] | Back alignment and domain information |
|---|
Probab=80.17 E-value=1.9 Score=35.20 Aligned_cols=45 Identities=20% Similarity=0.180 Sum_probs=36.0
Q ss_pred cEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCCCChhhhhhh
Q 042753 6 AHILVYPFPTSGHIIPLLDLTNRLLTLGLNVTVLITQNNLPLLDSL 51 (473)
Q Consensus 6 ~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~i~~~ 51 (473)
+||++...++.+=+. ...+.++|.++|++|.++.++...+.+...
T Consensus 1 k~i~l~vtGs~~~~~-~~~~l~~L~~~g~~v~vv~S~~A~~~~~~~ 45 (129)
T PF02441_consen 1 KRILLGVTGSIAAYK-APDLLRRLKRAGWEVRVVLSPSAERFVTPE 45 (129)
T ss_dssp -EEEEEE-SSGGGGG-HHHHHHHHHTTTSEEEEEESHHHHHHSHHH
T ss_pred CEEEEEEECHHHHHH-HHHHHHHHhhCCCEEEEEECCcHHHHhhhh
Confidence 588888887776666 999999999999999999999776666554
|
This enzyme catalyzes the removal of two reducing equivalents from the cysteine residue of the C-terminal meso-lanthionine of epidermin to form a --C==C-- double bond. This family also includes the B chain of dipicolinate synthase a small polar molecule that accumulates to high concentrations in bacterial endospores, and is thought to play a role in spore heat resistance, or the maintenance of heat resistance []. Dipicolinate synthase catalyses the formation of dipicolinic acid from dihydroxydipicolinic acid. This family also includes phenylacrylic acid decarboxylase 4.1.1 from EC [].; GO: 0003824 catalytic activity; PDB: 3QJG_L 1G63_G 1G5Q_L 1P3Y_1 1QZU_A 1E20_A 1MVN_A 1MVL_A 3ZQU_A 2EJB_A .... |
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 473 | ||||
| 2vce_A | 480 | Characterization And Engineering Of The Bifunctiona | 2e-39 | ||
| 2acw_A | 465 | Crystal Structure Of Medicago Truncatula Ugt71g1 Co | 8e-36 | ||
| 2acv_A | 463 | Crystal Structure Of Medicago Truncatula Ugt71g1 Le | 9e-36 | ||
| 2pq6_A | 482 | Crystal Structure Of Medicago Truncatula Ugt85h2- I | 3e-31 | ||
| 2c1x_A | 456 | Structure And Activity Of A Flavonoid 3-O Glucosylt | 2e-26 | ||
| 3hbf_A | 454 | Structure Of Ugt78g1 Complexed With Myricetin And U | 3e-26 | ||
| 2iya_A | 424 | The Crystal Structure Of Macrolide Glycosyltransfer | 3e-04 | ||
| 2iyf_A | 430 | The Crystal Structure Of Macrolide Glycosyltransfer | 4e-04 |
| >pdb|2VCE|A Chain A, Characterization And Engineering Of The Bifunctional N- And O-glucosyltransferase Involved In Xenobiotic Metabolism In Plants Length = 480 | Back alignment and structure |
|
| >pdb|2ACW|A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 Complexed With Udp-Glucose Length = 465 | Back alignment and structure |
|
| >pdb|2ACV|A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 Length = 463 | Back alignment and structure |
|
| >pdb|2PQ6|A Chain A, Crystal Structure Of Medicago Truncatula Ugt85h2- Insights Into The Structural Basis Of A Multifunctional (Iso) Flavonoid Glycosyltransferase Length = 482 | Back alignment and structure |
|
| >pdb|2C1X|A Chain A, Structure And Activity Of A Flavonoid 3-O Glucosyltransferase Reveals The Basis For Plant Natural Product Modification Length = 456 | Back alignment and structure |
|
| >pdb|3HBF|A Chain A, Structure Of Ugt78g1 Complexed With Myricetin And Udp Length = 454 | Back alignment and structure |
|
| >pdb|2IYA|A Chain A, The Crystal Structure Of Macrolide Glycosyltransferases: A Blueprint For Antibiotic Engineering Length = 424 | Back alignment and structure |
|
| >pdb|2IYF|A Chain A, The Crystal Structure Of Macrolide Glycosyltransferases: A Blueprint For Antibiotic Engineering Length = 430 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 473 | |||
| 2vch_A | 480 | Hydroquinone glucosyltransferase; glycosyltransfer | 1e-138 | |
| 2acv_A | 463 | Triterpene UDP-glucosyl transferase UGT71G1; glyco | 1e-130 | |
| 3hbf_A | 454 | Flavonoid 3-O-glucosyltransferase; glycosyltransfe | 1e-123 | |
| 2c1x_A | 456 | UDP-glucose flavonoid 3-O glycosyltransferase; WIN | 1e-120 | |
| 2pq6_A | 482 | UDP-glucuronosyl/UDP-glucosyltransferase; glycosyl | 1e-119 | |
| 2iya_A | 424 | OLEI, oleandomycin glycosyltransferase; carbohydra | 2e-30 | |
| 2iyf_A | 430 | OLED, oleandomycin glycosyltransferase; antibiotic | 1e-29 | |
| 3rsc_A | 415 | CALG2; TDP, enediyne, structural genomics, PSI-2, | 1e-26 | |
| 3ia7_A | 402 | CALG4; glycosysltransferase, calicheamicin, enediy | 3e-26 | |
| 3otg_A | 412 | CALG1; calicheamicin, TDP, structural genomics, PS | 2e-16 | |
| 3tsa_A | 391 | SPNG, NDP-rhamnosyltransferase; glycosyltransferas | 2e-14 | |
| 3oti_A | 398 | CALG3; calicheamicin, TDP, structural genomics, PS | 6e-14 | |
| 2p6p_A | 384 | Glycosyl transferase; X-RAY-diffraction,urdamycina | 6e-14 | |
| 2o6l_A | 170 | UDP-glucuronosyltransferase 2B7; drug metabolism, | 7e-14 | |
| 2yjn_A | 441 | ERYCIII, glycosyltransferase; transferase, cytochr | 8e-14 | |
| 4fzr_A | 398 | SSFS6; structural genomics, PSI-biology, protein s | 2e-13 | |
| 1rrv_A | 416 | Glycosyltransferase GTFD; GT-B, glycosyltransferas | 3e-12 | |
| 1iir_A | 415 | Glycosyltransferase GTFB; rossmann fold; 1.80A {Am | 1e-11 | |
| 3h4t_A | 404 | Glycosyltransferase GTFA, glycosyltransferase; van | 7e-09 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 2e-07 |
| >2vch_A Hydroquinone glucosyltransferase; glycosyltransferase, N-glucosyltransferase, UDP-glucose- dependent, plant glycosyltransferase; HET: UDP; 1.45A {Arabidopsis thaliana} SCOP: c.87.1.10 PDB: 2vce_A* 2vg8_A* Length = 480 | Back alignment and structure |
|---|
Score = 404 bits (1040), Expect = e-138
Identities = 129/487 (26%), Positives = 208/487 (42%), Gaps = 41/487 (8%)
Query: 6 AHILVYPFPTSGHIIPLLDLTNRLLTL-GLNVTVLITQNNLP-LLDSLNANHPSTSLQSL 63
H+ + P P GH+IPL++ RL+ L GL VT +I P + +S+ S+
Sbjct: 7 PHVAIIPSPGMGHLIPLVEFAKRLVHLHGLTVTFVIAGEGPPSKAQRTVLDSLPSSISSV 66
Query: 64 VLPQPKWPAGSPATRLLKFMRVLRELHYPALLDWFKSHPS---PPVAILSDFFLGWTQGL 120
LP S +TR+ + + P L F S P A++ D F +
Sbjct: 67 FLPPVDLTDLSSSTRIESRISLTVTRSNPELRKVFDSFVEGGRLPTALVVDLFGTDAFDV 126
Query: 121 AAELGLPRVVFSPSGAFALSVSFAMWT-----DLPTNDDPDNVDALVSFPRVPNCPVYPW 175
A E +P +F P+ A LS + + + + +P C
Sbjct: 127 AVEFHVPPYIFYPTTANVLSFFLHLPKLDETVSCEFRELTEPLM-------LPGCV---P 176
Query: 176 YQISHLYRTLKEGDPDWDLHRSNMMAN-KTSWGIVFNSFAELERVYIDHMKKEMGHD-RV 233
++ D + K + GI+ N+F ELE I +++ V
Sbjct: 177 VAGKDFLDPAQDRKDDAYKWLLHNTKRYKEAEGILVNTFFELEPNAIKALQEPGLDKPPV 236
Query: 234 WAVGPVLPPDDDLVESMCRGGSSSVPAHDVLTWLDSRRDESVVYVCFGSRYVLTAKQIHE 293
+ VGP++ + + L WLD++ SV+YV FGS LT +Q++E
Sbjct: 237 YPVGPLVNIGKQ--------EAKQTEESECLKWLDNQPLGSVLYVSFGSGGTLTCEQLNE 288
Query: 294 LAAALEKTDVDFVYCVREPDERHASQDCG---------VLPDGFEDRVAGRGYVIRGWSQ 344
LA L ++ F++ +R P S LP GF +R RG+VI W+
Sbjct: 289 LALGLADSEQRFLWVIRSPSGIANSSYFDSHSQTDPLTFLPPGFLERTKKRGFVIPFWAP 348
Query: 345 QVAILRHKAVGAFLTHCGWNSVLEGVSAGVVMLTWPMDADQYTNAQLLVDQLGVGIRVGE 404
Q +L H + G FLTHCGWNS LE V +G+ ++ WP+ A+Q NA LL + + +R
Sbjct: 349 QAQVLAHPSTGGFLTHCGWNSTLESVVSGIPLIAWPLYAEQKMNAVLLSEDIRAALRPRA 408
Query: 405 GTRNIPESDELARLLAQSVDGPRRE--RLKARELSGAALSAVVKGGSSDRDLNDFIKRIN 462
G + +E+AR++ ++G + R K +EL AA + G+S + L+ +
Sbjct: 409 GDDGLVRREEVARVVKGLMEGEEGKGVRNKMKELKEAACRVLKDDGTSTKALSLVALKWK 468
Query: 463 ELKSGKN 469
K
Sbjct: 469 AHKKELE 475
|
| >2acv_A Triterpene UDP-glucosyl transferase UGT71G1; glycosyltransferase; HET: UDP; 2.00A {Medicago truncatula} SCOP: c.87.1.10 PDB: 2acw_A* Length = 463 | Back alignment and structure |
|---|
Score = 385 bits (991), Expect = e-130
Identities = 127/473 (26%), Positives = 207/473 (43%), Gaps = 38/473 (8%)
Query: 6 AHILVYPFPTSGHIIPLLDLTNRLLT--LGLNVTVLITQNNLPLL-----DSLNANHPST 58
+ ++ P P GH+ L+ L L +TV + S+ A+ P
Sbjct: 10 SELIFIPAPGIGHLASALEFAKLLTNHDKNLYITVFCIKFPGMPFADSYIKSVLASQPQI 69
Query: 59 SLQSL--VLPQPKWPAGSPATRLLKFMRVLRELHYPALLDWFKSHPSPPV-AILSDFFLG 115
L L V P P+ SP +L F+ L P + K+ S V ++ DFF
Sbjct: 70 QLIDLPEVEPPPQELLKSPEFYILTFLESLI----PHVKATIKTILSNKVVGLVLDFFCV 125
Query: 116 WTQGLAAELGLPRVVFSPSGAFALSVSFAMWTDLPTNDDPDNVDALVSFPRVPNCPVYPW 175
+ E G+P +F S LS+ ++ + D+ D +P
Sbjct: 126 SMIDVGNEFGIPSYLFLTSNVGFLSLMLSLKN-RQIEEVFDDSDRDHQLLNIPGIS--NQ 182
Query: 176 YQISHLYRTLKEGDPDWDLHRSNMMANKTSWGIVFNSFAELERVYIDHMKKEMGHD-RVW 234
+ L D + + + + GI+ N+F++LE+ ID + ++
Sbjct: 183 VPSNVLPDACFNKDGGYIAYYKLAERFRDTKGIIVNTFSDLEQSSIDALYDHDEKIPPIY 242
Query: 235 AVGPVLPPDDDLVESMCRGGSSSVPAHDVLTWLDSRRDESVVYVCFGSRYV-LTAKQIHE 293
AVGP+L +L WLD + D+SVV++CFGS V QI E
Sbjct: 243 AVGPLLDLKGQPNPK-----LDQAQHDLILKWLDEQPDKSVVFLCFGSMGVSFGPSQIRE 297
Query: 294 LAAALEKTDVDFVYCVREPDERHASQDCGVLPDGFED--RVAGRGYVIRGWSQQVAILRH 351
+A L+ + V F++ + V P+GF + + G+G + GW+ QV +L H
Sbjct: 298 IALGLKHSGVRFLWSNSAEKK--------VFPEGFLEWMELEGKGMIC-GWAPQVEVLAH 348
Query: 352 KAVGAFLTHCGWNSVLEGVSAGVVMLTWPMDADQYTNAQLLVDQLGVGIRVG---EGTRN 408
KA+G F++HCGWNS+LE + GV +LTWP+ A+Q NA LV + GVG+ + +
Sbjct: 349 KAIGGFVSHCGWNSILESMWFGVPILTWPIYAEQQLNAFRLVKEWGVGLGLRVDYRKGSD 408
Query: 409 IPESDELARLLAQSVDGPRRERLKARELSGAALSAVVKGGSSDRDLNDFIKRI 461
+ ++E+ + L +D K +E+ + +AVV GGSS + I I
Sbjct: 409 VVAAEEIEKGLKDLMDKDSIVHKKVQEMKEMSRNAVVDGGSSLISVGKLIDDI 461
|
| >3hbf_A Flavonoid 3-O-glucosyltransferase; glycosyltransferase, GT-B fold, GT1, phenylpropanoid metabolism; HET: UDP MYC; 2.10A {Medicago truncatula} PDB: 3hbj_A* Length = 454 | Back alignment and structure |
|---|
Score = 366 bits (942), Expect = e-123
Identities = 113/473 (23%), Positives = 191/473 (40%), Gaps = 46/473 (9%)
Query: 7 HILVYPFPTSGHIIPLLDLTNRLLTLGLNVTVLI---TQNNLPLLDSLNANHPSTSLQSL 63
H+ V FP H PLL L ++ T VT T N L N P+ ++
Sbjct: 15 HVAVLAFPFGTHAAPLLSLVKKIATEAPKVTFSFFCTTTTNDTLFSRSNEFLPNIKYYNV 74
Query: 64 --VLPQPKWPAGSPATRLLKFMRVLRELHYPALLDWFKSHPSPPV-AILSDFFLGWTQGL 120
LP+ +G+P + F++ ++E ++ ++D + + +++D F + L
Sbjct: 75 HDGLPKGYVSSGNPREPIFLFIKAMQE-NFKHVIDEAVAETGKNITCLVTDAFFWFGADL 133
Query: 121 AAELGLPRVVFSPSGAFALSVSFAMW-----TDLPTNDDPDNVDALVSFPRVPNCPVYPW 175
A E+ V +G +L T D ++D +P P
Sbjct: 134 AEEMHAKWVPLWTAGPHSLLTHVYTDLIREKTGSKEVHDVKSID------VLPGFPELKA 187
Query: 176 YQISHLYRTLKEGDPDWDLHRSNMMANKTSWGIVFNSFAELERVYIDHMKKEMGHDRVWA 235
+ + LH+ + + + + NSFA + + + + + +
Sbjct: 188 SDLPEGVIKDIDVPFATMLHKMGLELPRANA-VAINSFATIHPLIENELNSKFK--LLLN 244
Query: 236 VGPVLPPDDDLVESMCRGGSSSVPAHDVLTWLDSRRDESVVYVCFGSRYVLTAKQIHELA 295
VGP ++ H L WLD + SVVY+ FGS ++ LA
Sbjct: 245 VGPF---------NLTTPQRKVSDEHGCLEWLDQHENSSVVYISFGSVVTPPPHELTALA 295
Query: 296 AALEKTDVDFVYCVREPDERHASQDCGVLPDGFEDRVAGRGYVIRGWSQQVAILRHKAVG 355
+LE+ F++ R + LP GF +R +G ++ W+ QV IL+H +VG
Sbjct: 296 ESLEECGFPFIWSFRGDPK-------EKLPKGFLERTKTKGKIV-AWAPQVEILKHSSVG 347
Query: 356 AFLTHCGWNSVLEGVSAGVVMLTWPMDADQYTNAQLLVDQLGVGIRVGEGTRNIPESDEL 415
FLTH GWNSVLE + GV M++ P DQ N L L +G+ V G + + +
Sbjct: 348 VFLTHSGWNSVLECIVGGVPMISRPFFGDQGLNTILTESVLEIGVGVDNG---VLTKESI 404
Query: 416 ARLLAQSVDGPRRE--RLKARELSGAALSAVVKGGSSDRDLNDFIKRINELKS 466
+ L ++ + R K +L +A AV + G+S D I + S
Sbjct: 405 KKALELTMSSEKGGIMRQKIVKLKESAFKAVEQNGTSAMDFTTL---IQIVTS 454
|
| >2c1x_A UDP-glucose flavonoid 3-O glycosyltransferase; WINE, catalysis, glycosylation; HET: UDP B3P; 1.9A {Vitis vinifera} SCOP: c.87.1.10 PDB: 2c1z_A* 2c9z_A* Length = 456 | Back alignment and structure |
|---|
Score = 359 bits (923), Expect = e-120
Identities = 109/479 (22%), Positives = 190/479 (39%), Gaps = 38/479 (7%)
Query: 3 PAGAHILVYPFPTSGHIIPLLDLTNRLLTLGLNVTVLI---TQNNLPLLDSLNANHPST- 58
H+ V FP S H PLL + RL + +Q+N +
Sbjct: 5 TTNPHVAVLAFPFSTHAAPLLAVVRRLAAAAPHAVFSFFSTSQSNASIFHDSMHTMQCNI 64
Query: 59 SLQSL--VLPQPKWPAGSPATRLLKFMRVLRELHYPALLDWFKSHPSPPVAILSDFFLGW 116
+ +P+ AG P + F R E ++ P +++D F+ +
Sbjct: 65 KSYDISDGVPEGYVFAGRPQEDIELFTRAAPESFRQGMVMAVAETGRPVSCLVADAFIWF 124
Query: 117 TQGLAAELGLPRVVFSPSGAFALSVSFAMWT---DLPTNDDPDNVDALVSFPRVPNCPVY 173
+AAE+G+ + F +G +LS + + + D L++F +P
Sbjct: 125 AADMAAEMGVAWLPFWTAGPNSLSTHVYIDEIREKIGVSGIQGREDELLNF--IPGMSKV 182
Query: 174 PWYQISHLYRTLKEGDPDWDLHRSNMMANKTSWGIVFNSFAELERVYIDHMKKEMGHDRV 233
+ + + + + NSF EL+ + +K ++
Sbjct: 183 RFRDLQEGIVFGNLNSLFSRMLHRMGQVLPKATAVFINSFEELDDSLTNDLKSKLK--TY 240
Query: 234 WAVGPVLPPDDDLVESMCRGGSSSVPAHDVLTWLDSRRDESVVYVCFGSRYVLTAKQIHE 293
+GP ++ L WL R+ SVVY+ FG+ ++
Sbjct: 241 LNIGPF---------NLITPPPVVPNTTGCLQWLKERKPTSVVYISFGTVTTPPPAEVVA 291
Query: 294 LAAALEKTDVDFVYCVREPDERHASQDCGVLPDGFEDRVAGRGYVIRGWSQQVAILRHKA 353
L+ ALE + V F++ +R+ H LP+GF ++ G G V+ W+ Q +L H+A
Sbjct: 292 LSEALEASRVPFIWSLRDKARVH-------LPEGFLEKTRGYGMVVP-WAPQAEVLAHEA 343
Query: 354 VGAFLTHCGWNSVLEGVSAGVVMLTWPMDADQYTNAQLLVDQLGVGIRVGEGTRNIPESD 413
VGAF+THCGWNS+ E V+ GV ++ P DQ N +++ D L +G+R+ G +
Sbjct: 344 VGAFVTHCGWNSLWESVAGGVPLICRPFFGDQRLNGRMVEDVLEIGVRIEGG---VFTKS 400
Query: 414 ELARLLAQSVDGPRRE--RLKARELSGAALSAVVKGGSSDRDLNDFIKRINELKSGKNL 470
L Q + + + R R L A AV GSS + ++ + K++
Sbjct: 401 GLMSCFDQILSQEKGKKLRENLRALRETADRAVGPKGSSTENFITL---VDLVSKPKDV 456
|
| >2pq6_A UDP-glucuronosyl/UDP-glucosyltransferase; glycosylation, isoflavonoid, uridine diphosphate glycosyltransferase; 2.10A {Medicago truncatula} SCOP: c.87.1.10 Length = 482 | Back alignment and structure |
|---|
Score = 357 bits (919), Expect = e-119
Identities = 120/486 (24%), Positives = 197/486 (40%), Gaps = 36/486 (7%)
Query: 7 HILVYPFPTSGHIIPLLDLTNRLLTLGLNVTVLITQNNLPLLDSLNANHPSTSLQSLVLP 66
H+++ P+P GHI PL L L G ++T + T+ N L
Sbjct: 10 HVVMIPYPVQGHINPLFKLAKLLHLRGFHITFVNTEYNHKRLLKSRGPKAFDGFTDFNFE 69
Query: 67 ------QPKWPAGSPATRLLKFMRVLRELHYPALLD----WFKSHPSPPVA-ILSDFFLG 115
P G + + + +R+ + S PPV ++SD +
Sbjct: 70 SIPDGLTPMEGDGDVSQDVPTLCQSVRKNFLKPYCELLTRLNHSTNVPPVTCLVSDCCMS 129
Query: 116 WTQGLAAELGLPRVVFSPSGAFALSVSFAMWT-----DLPTNDDP--DNVDALVSFPRVP 168
+T A E LP V++ S A +L + +P D+ N +P
Sbjct: 130 FTIQAAEEFELPNVLYFSSSACSLLNVMHFRSFVERGIIPFKDESYLTNGCLETKVDWIP 189
Query: 169 NCPVYPWYQISHLYRTLKEGDPDWDLHRSNMMANKTSWGIVFNSFAELERVYIDHMKKEM 228
+ I RT D + I+ N+F ELE I+ + +
Sbjct: 190 GLKNFRLKDIVDFIRTTNPNDIMLEFFIEVADRVNKDTTILLNTFNELESDVINALSSTI 249
Query: 229 GHDRVWAVGPVLP---PDDDLVESMCRGGSSSVPAHDVLTWLDSRRDESVVYVCFGSRYV 285
++ +GP+ + + + + L WL+S+ SVVYV FGS V
Sbjct: 250 P--SIYPIGPLPSLLKQTPQIHQLDSLDSNLWKEDTECLDWLESKEPGSVVYVNFGSTTV 307
Query: 286 LTAKQIHELAAALEKTDVDFVYCVREPDERHASQDCGVLPDGFEDRVAGRGYVIRGWSQQ 345
+T +Q+ E A L F++ +R PD + F + +A RG + W Q
Sbjct: 308 MTPEQLLEFAWGLANCKKSFLWIIR-PDLVIGGSV--IFSSEFTNEIADRGLIA-SWCPQ 363
Query: 346 VAILRHKAVGAFLTHCGWNSVLEGVSAGVVMLTWPMDADQYTNAQLLVDQLGVGIRVGEG 405
+L H ++G FLTHCGWNS E + AGV ML WP ADQ T+ + + ++ +G+ +
Sbjct: 364 DKVLNHPSIGGFLTHCGWNSTTESICAGVPMLCWPFFADQPTDCRFICNEWEIGMEID-- 421
Query: 406 TRNIPESDELARLLAQSVDGPRRE--RLKARELSGAALSAVVKGGSSDRDLNDFIKRINE 463
+ +ELA+L+ + + G + + + KA EL A GG S +LN I +
Sbjct: 422 --TNVKREELAKLINEVIAGDKGKKMKQKAMELKKKAEENTRPGGCSYMNLNKV---IKD 476
Query: 464 LKSGKN 469
+ +N
Sbjct: 477 VLLKQN 482
|
| >2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus} Length = 424 | Back alignment and structure |
|---|
Score = 121 bits (305), Expect = 2e-30
Identities = 74/438 (16%), Positives = 129/438 (29%), Gaps = 52/438 (11%)
Query: 4 AGAHILVYPFPTSGHIIPLLDLTNRLLTLGLNVTVLITQNNLPLLDSLNAN-HPSTSLQS 62
HI + P GH+ P L + L+ G V+ IT + + A S+
Sbjct: 11 TPRHISFFNIPGHGHVNPSLGIVQELVARGHRVSYAITDEFAAQVKAAGATPVVYDSILP 70
Query: 63 LVLPQPKWPAGSPATRLLKFMRVLRELHYPALLDWFKSHPSPPVAILSDFFLGWTQGLAA 122
+ + + F+ + P L D + P I+ D L
Sbjct: 71 KESNPEESWPEDQESAMGLFLDEAVRV-LPQLEDAYAD--DRPDLIVYDIASWPAPVLGR 127
Query: 123 ELGLPRVVFSPSGAFALSVSFAMWTDLPTNDDPDNVDALVSFPRVPNCPVYPWYQISHLY 182
+ +P V SP+ + P
Sbjct: 128 KWDIPFVQLSPTFVAYEGFEEDV-------------------------PAVQDPTADRGE 162
Query: 183 RTLKEGDPDWDLHRSNMMANKTSWGIVFNSFAELERVYIDHMKKEMGHDRVWAVGP--VL 240
+ + ++F E V + + +R P
Sbjct: 163 EAAAPAGTGDAEEGAEAEDGLVRFFTRLSAFLEEHGVDTPATEFLIAPNRCIVALPRTFQ 222
Query: 241 PPDDDLVESMCRGGSSSVPAHDVLTWLDSRRDESVVYVCFGSRYVLTAKQIHELAAALEK 300
D + ++ G + TW V+ + GS + +A++
Sbjct: 223 IKGDTVGDNYTFVGPTYGDRSHQGTWEGPGDGRPVLLIALGSAFTDHLDFYRTCLSAVDG 282
Query: 301 TDVDFVYCVREPDERHASQDCGVLPDGFEDRVAGRGYVIRGWSQQVAILRHKAVGAFLTH 360
D V V + D G +P E + W Q+ IL AF+TH
Sbjct: 283 LDWHVVLSVGRFVDP---ADLGEVPPNVE---------VHQWVPQLDILTK--ASAFITH 328
Query: 361 CGWNSVLEGVSAGVVMLTWPMDADQYTNAQLLVDQLGVGIRVGEGTRNIPESDELARLLA 420
G S +E +S V M+ P A+Q NA+ +V+ LG+G + +++L +
Sbjct: 329 AGMGSTMEALSNAVPMVAVPQIAEQTMNAERIVE-LGLGRHIPRDQ---VTAEKLREAVL 384
Query: 421 QSVDGPR-RERLKARELS 437
P ER +
Sbjct: 385 AVASDPGVAER--LAAVR 400
|
| >2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus} Length = 430 | Back alignment and structure |
|---|
Score = 119 bits (299), Expect = 1e-29
Identities = 83/434 (19%), Positives = 125/434 (28%), Gaps = 65/434 (14%)
Query: 6 AHILVYPFPTSGHIIPLLDLTNRLLTLGLNVTVLITQNNLPLLDSLNAN-HPSTSLQSLV 64
AHI ++ GH+ P L++ L+ G VT I + + S
Sbjct: 8 AHIAMFSIAAHGHVNPSLEVIRELVARGHRVTYAIPPVFADKVAATGPRPVLYHSTLPGP 67
Query: 65 LPQPKWPAGSPATRLLKFMRVLRELHYPALLDWFKSHPSPPVAILSDFFLGWTQGLAAEL 124
P+ + + F+ + P L D + P +L D + LA
Sbjct: 68 DADPEAWGSTLLDNVEPFLNDAIQ-ALPQLADAYAD--DIPDLVLHDITSYPARVLARRW 124
Query: 125 GLPRVVFSPSGAFALSVSFAMWTDLPTNDDPDNVDALVSFPRVPNCPVYPWYQISHLYRT 184
G+P V SP + W R Y ++ + L
Sbjct: 125 GVPAVSLSP--------NLVAWKGYEEEVAEPMWREPRQTERGR--AYYARFE-AWLKEN 173
Query: 185 LKEGDPDWDLHRSNMMANKTSWGIVFNSFAELERVYIDHMKKEMGHDRVWAVGPVLPPDD 244
PD + ++ E VY VG
Sbjct: 174 GITEHPDTFASHPPRSLVLIPKALQPHADRVDEDVYT-------------FVGACQGDRA 220
Query: 245 DLVESMCRGGSSSVPAHDVLTWLDSRRDESVVYVCFGSRYVLTAKQIHELAAALEKTDVD 304
+ W E VV V GS + E A
Sbjct: 221 EEGG-----------------WQRPAGAEKVVLVSLGSAFTKQPAFYRECVRAFGNLPGW 263
Query: 305 FVYCVREPDERHASQDCGVLPDGFEDRVAGRGYVIRGWSQQVAILRHKAVGAFLTHCGWN 364
+ V + + + G LPD E + W Q+AILR F+TH G
Sbjct: 264 HL--VLQIGRKVTPAELGELPDNVE---------VHDWVPQLAILRQ--ADLFVTHAGAG 310
Query: 365 SVLEGVSAGVVMLTWPMDADQYTNAQLLVDQLGVGIRVGEGTRNIPESDELARLLAQSVD 424
EG++ M+ P DQ+ NA +L LGV ++ +D L VD
Sbjct: 311 GSQEGLATATPMIAVPQAVDQFGNADMLQG-LGVARKLATEE---ATADLLRETALALVD 366
Query: 425 GPR-RERLKARELS 437
P R R +
Sbjct: 367 DPEVARR--LRRIQ 378
|
| >3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A* Length = 415 | Back alignment and structure |
|---|
Score = 110 bits (277), Expect = 1e-26
Identities = 67/437 (15%), Positives = 116/437 (26%), Gaps = 70/437 (16%)
Query: 6 AHILVYPFPTSGHIIPLLDLTNRLLTLGLNVTVLITQNNLPLLDSLNAN-HPSTSLQSLV 64
AH+L+ + G I+P L + L+ G V+ + + + A P S
Sbjct: 21 AHLLIVNVASHGLILPTLTVVTELVRRGHRVSYVTAGGFAEPVRAAGATVVPYQSEIIDA 80
Query: 65 LPQPKWPAGSPATRLLKFMRVLRELHYPALLDWFKSHPSPPVAILSD-FFLGWTQGLAAE 123
+ + R A + P +L D F Q LAA
Sbjct: 81 DAAEVFGSDDLGVRPHLMYLRENVSVLRATAEALDGDV--PDLVLYDDFPFIAGQLLAAR 138
Query: 124 LGLPRVVFSPSGAFALSVSFAMWTDLPTNDDPDNVDALVSFPRVPNCPVYPWYQ--ISHL 181
P V S + +N+ +V+ + P ++ + L
Sbjct: 139 WRRPAVRLSAA--------------FASNEHYSFSQDMVTLAGTIDPLDLPVFRDTLRDL 184
Query: 182 YRTLKEGDPDWDLHRSNMMANKTSWGIVFNSFAELERVYIDHMKKEMGHDRVWAVGPVLP 241
D + +VF A
Sbjct: 185 LAEHGLSRSVVDC-----WNHVEQLNLVFVPKA------------------------FQI 215
Query: 242 PDDDLVESMCRGGSSSVPAHDVLTWLDSRRDESVVYVCFGSRYVLTAKQIHELAAALEKT 301
D + G + W D VV V G+ + + A A +
Sbjct: 216 AGDTFDDRFVFVGPCFDDRRFLGEWTRPADDLPVVLVSLGTTFNDRPGFFRDCARAFDGQ 275
Query: 302 DVDFVYCVREPDERHASQDCGVLPDGFEDRVAGRGYVIRGWSQQVAILRHKAVGAFLTHC 361
V + + + G LP E W V +L +TH
Sbjct: 276 PWHVV--MTLGGQVDPAAL-GDLPPNVE---------AHRWVPHVKVLEQ--ATVCVTHG 321
Query: 362 GWNSVLEGVSAGVVMLTWPMDADQYTNAQLLVDQLGVGIRVGEGTRNIPESDELARLLAQ 421
G +++E + G ++ P D A+ + LG+G + + D L +
Sbjct: 322 GMGTLMEALYWGRPLVVVPQSFDVQPMARRVDQ-LGLGAVLPGEK---ADGDTLLAAVGA 377
Query: 422 SVDGPR-RERLKARELS 437
P R +
Sbjct: 378 VAADPALLAR--VEAMR 392
|
| >3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora} Length = 402 | Back alignment and structure |
|---|
Score = 109 bits (273), Expect = 3e-26
Identities = 77/437 (17%), Positives = 132/437 (30%), Gaps = 69/437 (15%)
Query: 6 AHILVYPFPTSGHIIPLLDLTNRLLTLGLNVTVLITQNNLPLLDSLNANHPS--TSLQSL 63
HIL GH+ P L L + L G +T + T + + A + +
Sbjct: 5 RHILFANVQGHGHVYPSLGLVSELARRGHRITYVTTPLFADEVKAAGAEVVLYKSEFDTF 64
Query: 64 VLPQPKWPAGSPATRLLKFMRVLRELHYPALLDWFKSHPSPPVAILSD-FFLGWTQGLAA 122
+P+ + L ++R + A + +PP ++ D F + LAA
Sbjct: 65 HVPEVVKQEDAETQLHLVYVRENVAI-LRAAEEALGD--NPPDLVVYDVFPFIAGRLLAA 121
Query: 123 ELGLPRVVFSPSGAFALSVSFAMWTDLPTNDDPDNVDALVSFPRVPNCPVYPWYQISHLY 182
P V + N+ L + S L
Sbjct: 122 RWDRPAVRLTGG--------------FAANEHYSLFKELWKSNGQRHPADVEAVH-SVLV 166
Query: 183 RTLKEGDPDWDLHRSNMMANKTSWGIVFNSFAELERVYIDHMKKEMGHDRVWAVGPVLPP 242
L + D + + E+E + I + K P
Sbjct: 167 DLLGKYGVDTPV---------------KEYWDEIEGLTIVFLPKSF-----------QPF 200
Query: 243 DDDLVESMCRGGSSSVPAHDVLTWLDSRRDESVVYVCFGSRYVLTAKQIHELAAALEKTD 302
+ E G + W R D V+ V G+++ + A A T
Sbjct: 201 AETFDERFAFVGPTLTGRDGQPGWQPPRPDAPVLLVSLGNQFNEHPEFFRACAQAFADTP 260
Query: 303 VDFVYCVREPDERHASQDCGVLPDGFEDRVAGRGYVIRGWSQQVAILRHKAVGAFLTHCG 362
V + + G LP E W ++L H A LTH
Sbjct: 261 WHVV--MAIGGFLDPAVL-GPLPPNVE---------AHQWIPFHSVLAH--ARACLTHGT 306
Query: 363 WNSVLEGVSAGVVMLTWPMDA-DQYTNAQLLVDQLGVGIRVGEGTRNIPESDELARLLAQ 421
+VLE +AGV ++ P A + +A+ +++ LG+G + E + + +
Sbjct: 307 TGAVLEAFAAGVPLVLVPHFATEAAPSAERVIE-LGLGSVLRPDQ---LEPASIREAVER 362
Query: 422 SVDGPR-RERLKARELS 437
RER R +
Sbjct: 363 LAADSAVRER--VRRMQ 377
|
| >3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A* Length = 412 | Back alignment and structure |
|---|
Score = 80.1 bits (198), Expect = 2e-16
Identities = 65/455 (14%), Positives = 122/455 (26%), Gaps = 101/455 (22%)
Query: 7 HILVYPFPTSGHIIPLLDLTNRLLTLGLNVTVL--------ITQNNLPLLDSLNANHPST 58
+L T GH PLL L G VT + + + +
Sbjct: 22 RVLFASLGTHGHTYPLLPLATAARAAGHEVTFATGEGFAGTLRKLGFEPVATGMPVFDGF 81
Query: 59 SLQSLVLPQPKWPAGSPATRLLK-----FMRVLRELHYPALLDWFKSHPSPPVAILSDFF 113
+ P G +L + F RV+ + + L + P ++ +
Sbjct: 82 LAALRIRFDTDSPEGLTPEQLSELPQIVFGRVIPQRVFDELQPVIERLR--PDLVVQEIS 139
Query: 114 LGWTQGLAAELGLPRVVFSPSGAFALSVSFAMWTDLPT----NDDPDNVDALVSFPRVPN 169
A + G+P + ++ ++ ++ + F
Sbjct: 140 NYGAGLAALKAGIPTICHGVGRDTPDDLTRSIEEEVRGLAQRLGLDLPPGRIDGFGNPFI 199
Query: 170 CPVYPWYQISHLYRTLKEGDPDWDLHRSNMMANKTSWGIVFNSFAELERVYIDHMKKEMG 229
P Q +P++
Sbjct: 200 DIFPPSLQ-----------EPEFRAR---------------------------------- 214
Query: 230 HDRVWAVGPVLPPDDDLVESMCRGGSSSVPAHDVLTWLDSRRDESVVYVCFGSRYVLTAK 289
R + PV + L+ D+ R +VY+ G+ T +
Sbjct: 215 -PRRHELRPVPFAEQG-------------DLPAWLSSRDTAR--PLVYLTLGTSSGGTVE 258
Query: 290 QIHELAAALEKTDVDFVYCVREPDERHASQDCGVLPDGFEDRVAGRGYVIRGWSQQVAIL 349
+ L D D + + G +P + W Q A+L
Sbjct: 259 VLRAAIDGLAGLDADVLVASGPSLDV---SGLGEVPANVR---------LESWVPQAALL 306
Query: 350 RHKAVGAFLTHCGWNSVLEGVSAGVVMLTWPMDADQYTNAQLLVDQLGVGIRVGEGTRNI 409
H V + H G + L + AGV L++P D + NAQ + G G +
Sbjct: 307 PH--VDLVVHHGGSGTTLGALGAGVPQLSFPWAGDSFANAQAVAQ-AGAGDHLLPDN--- 360
Query: 410 PESDELARLLAQSVDGPR-RERLKARELSGAALSA 443
D ++ + + R AR ++ +
Sbjct: 361 ISPDSVSGAAKRLLAEESYRAG--ARAVAAEIAAM 393
|
| >3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A* Length = 391 | Back alignment and structure |
|---|
Score = 74.1 bits (182), Expect = 2e-14
Identities = 34/204 (16%), Positives = 56/204 (27%), Gaps = 25/204 (12%)
Query: 238 PVLPPDDDLVESMCRGGSSSVPAHDVLTWLDSRRDESVVYVCFGSRYVLTAKQ---IHEL 294
+ D + + W +R V +C G + + +
Sbjct: 185 SLQASDAPQGAPVQYVPY--NGSGAFPAWGAARTSARRVCICMGRMVLNATGPAPLLRAV 242
Query: 295 AAALEKTDVDFVYCVREPDERHASQDCGVLPDGFEDRVAGRGYVIRGWSQQVAILRHKAV 354
AAA E V+ V V LPD I LR
Sbjct: 243 AAATELPGVEAVIAVPPEHRALL----TDLPDNAR---------IAESVPLNLFLRT--C 287
Query: 355 GAFLTHCGWNSVLEGVSAGVVMLTWPMDADQYTNAQLLVDQLGVGIRVGEGTRNIPESDE 414
+ G + G+ L P DQ+ A+ L G GI + + + ++
Sbjct: 288 ELVICAGGSGTAFTATRLGIPQLVLPQYFDQFDYARNLAA-AGAGICL-PDEQAQSDHEQ 345
Query: 415 LARLLAQSVDGPR-RERLKARELS 437
+A + A +LS
Sbjct: 346 FTDSIATVLGDTGFAAA--AIKLS 367
|
| >3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A* Length = 398 | Back alignment and structure |
|---|
Score = 72.2 bits (177), Expect = 6e-14
Identities = 42/212 (19%), Positives = 76/212 (35%), Gaps = 31/212 (14%)
Query: 235 AVGPVLPPDDDLVESMCRGGSSSVPAHDVLTWLDSRRDESVVYVCFGSRYVLTAKQ--IH 292
++ P+ + + GG + + L V + G+ + +
Sbjct: 199 SLLLEAEPEGWFMRWVPYGGGAVLGD-----RLPPVPARPEVAITMGTIELQAFGIGAVE 253
Query: 293 ELAAALEKTDVDFVYCVREPDERHASQDCGVLPDGFEDRVAGRGYVIRGWSQQVAILRHK 352
+ AA + D DFV + + D G LP GW+ +LR
Sbjct: 254 PIIAAAGEVDADFVLALGDLDIS----PLGTLPRNVR---------AVGWTPLHTLLRT- 299
Query: 353 AVGAFLTHCGWNSVLEGVSAGVVMLTWPMDADQYTNA-QLLVDQLGVGIRVGEGTRNIPE 411
A + H G +V+ + AG+ L P DQ+ + + V + G+G+ +
Sbjct: 300 -CTAVVHHGGGGTVMTAIDAGIPQLLAPDPRDQFQHTAREAVSRRGIGLVSTSDK---VD 355
Query: 412 SDELARLLAQSVDGPRRERLKARELSGAALSA 443
+D L RL+ D R ARE+ ++
Sbjct: 356 ADLLRRLIG---DESLRTA--AREVREEMVAL 382
|
| >2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis; 1.88A {Streptomyces fradiae} Length = 384 | Back alignment and structure |
|---|
Score = 72.1 bits (177), Expect = 6e-14
Identities = 66/442 (14%), Positives = 117/442 (26%), Gaps = 86/442 (19%)
Query: 8 ILVYPFPTSGHIIPLLDLTNRLLTLGLNVTVLITQNNLPLLDSLNANHPSTSLQSLVLPQ 67
IL + + L L G V + Q+ P++ + +T+ +
Sbjct: 3 ILFVAAGSPATVFALAPLATAARNAGHQVVMAANQDMGPVVTGVGLPAVATTDLPIRHFI 62
Query: 68 PKWPAGSPATRLLKFMRVLRELHYPALLDWFKSHPSPPVAILSDFFLGWTQGLAAELGLP 127
G P + R WF + + + DF W P
Sbjct: 63 TTDREGRPEAIPSDPVAQARFTG-----RWFARMAASSLPRMLDFSRAWR---------P 108
Query: 128 RVVFSPSGAFALSVSFAMWTDLPTNDDPDNVDALVSFPRVPNCPVYPWYQISHLYRTLKE 187
++ + ++ + A+ +P R V L+
Sbjct: 109 DLIVGGTMSYVAPL-LALHLGVP-------------HARQTWDAVDADGIHPGADAELRP 154
Query: 188 GDPDWDLHRSNMMANKTSWGIVFNSFAELERVYIDHMKKEMGHDRVWAVGPVLPPDDDLV 247
+ L R + P L P +
Sbjct: 155 ELSELGLERL-----------------------------PAPDLFIDICPPSLRPANAAP 185
Query: 248 ESMCRGGSSSVPAHDVLTWLDSRRDESVVYVCFGSRYVLTAKQ-----IHELAAALEKTD 302
M R ++S + W+ +R V V GSR + + LA L + D
Sbjct: 186 ARMMRHVATSRQCP-LEPWMYTRDTRQRVLVTSGSRVAKESYDRNFDFLRGLAKDLVRWD 244
Query: 303 VDFVYCVREPDERHASQDCGVLPDGFEDRVAGRGYVIRGWSQQVAILRHKAVGAFLTHCG 362
V+ + + GW+ + + H G
Sbjct: 245 VELIVAAPDTVAE----ALRAEVPQ----------ARVGWTPLDVVAPT--CDLLVHHAG 288
Query: 363 WNSVLEGVSAGVVMLTWPMDADQYTNAQLLVDQLGVGIRVGEGTRNIPESDELARLLAQS 422
S L G+SAGV L P + A+ + D G I + G ++ +A +
Sbjct: 289 GVSTLTGLSAGVPQLLIPKGSVLEAPARRVAD-YGAAIALLPGE---DSTEAIADSCQEL 344
Query: 423 VDGPR-RERLKARELSGAALSA 443
R A++LS
Sbjct: 345 QAKDTYARR--AQDLSREISGM 364
|
| >2o6l_A UDP-glucuronosyltransferase 2B7; drug metabolism, rossman, MAD, enzyme, nucleotide binding, sugar,UDP-glucuronosyltransferase, UGT; 1.80A {Homo sapiens} Length = 170 | Back alignment and structure |
|---|
Score = 68.4 bits (168), Expect = 7e-14
Identities = 33/143 (23%), Positives = 57/143 (39%), Gaps = 20/143 (13%)
Query: 262 DVLTWLDSRRDESVVYVCFGSRYV--LTAKQIHELAAALEKTDVDFVYCVREPDERHASQ 319
++ ++ S + VV GS V +T ++ + +A+AL + ++
Sbjct: 10 EMEDFVQSSGENGVVVFSLGS-MVSNMTEERANVIASALAQIPQKVLWRFDGN------- 61
Query: 320 DCGVLPDGFEDRVAGRGYVIRGWSQQVAILRHKAVGAFLTHCGWNSVLEGVSAGVVMLTW 379
PD + W Q +L H AF+TH G N + E + G+ M+
Sbjct: 62 ----KPDTLGLNT-----RLYKWIPQNDLLGHPKTRAFITHGGANGIYEAIYHGIPMVGI 112
Query: 380 PMDADQYTNAQLLVDQLGVGIRV 402
P+ ADQ N + G +RV
Sbjct: 113 PLFADQPDNIAHMK-ARGAAVRV 134
|
| >2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea} Length = 441 | Back alignment and structure |
|---|
Score = 72.2 bits (177), Expect = 8e-14
Identities = 70/457 (15%), Positives = 122/457 (26%), Gaps = 64/457 (14%)
Query: 1 MLPAGAH--ILVYPFPTSGHIIPLLDLTNRLLTLGLNVTVLITQNNLPLLDSLNANH--P 56
++P G+H ++ + H+ L+ L G V V+ + + +
Sbjct: 14 LVPRGSHMRVVFSSMASKSHLFGLVPLAWAFRAAGHEVRVVASPALTEDITAAGLTAVPV 73
Query: 57 STSLQSLVLPQPKWPAGSPATRLLKFMRVLRELHYPALLDWFKS--HPSPPVAILSDFFL 114
T + + R L F L ++ P+ + D +
Sbjct: 74 GTDVDLVDFMTHAGHDIIDYVRSLDFSERDPATLTWEHLLGMQTVLTPTFYALMSPDTLI 133
Query: 115 GWTQGLAAELGLPRVVFSPSGAFALSVSFAMWTDLPTNDDPDNVDALVSFPRVPNCPVYP 174
+ V++ P A A T P R+ P
Sbjct: 134 EGMVSFCRKWRPDLVIWEPLTFAAPIA--AAVTGTP-------------HARLLWGPDIT 178
Query: 175 WYQISHLYRTLKEGDPDWDLHRSNMMANKTSWGIVFNSFAELERVYIDHMKKEMGHDRVW 234
+ L + + HR + +A +W LE+ +E+ + W
Sbjct: 179 TRARQNFLGLLPDQPEE---HREDPLAEWLTW--------TLEKYGGPAFDEEVVVGQ-W 226
Query: 235 AVGPVLP----PDDDLVESMCRGGSSSVPAHDVLTWLDSRRDESVVYVCFGSRYVLT--- 287
+ P M V WL + V + G
Sbjct: 227 TIDPAPAAIRLDTGLKTVGMRYVDY--NGPSVVPEWLHDEPERRRVCLTLGISSRENSIG 284
Query: 288 AKQIHELAAALEKTDVDFVYCVREPDERHASQDCGVLPDGFEDRVAGRGYVIRGWSQQVA 347
I EL A+ D + + +PD G+ A
Sbjct: 285 QVSIEELLGAVGDVDAEIIATFDAQQLE----GVANIPDNVR---------TVGFVPMHA 331
Query: 348 ILRHKAVGAFLTHCGWNSVLEGVSAGVVMLTWPMDADQYTNAQLLVDQLGVGIRVGEGTR 407
+L A + H G S GV + P D AQ + G GI +
Sbjct: 332 LLPT--CAATVHHGGPGSWHTAAIHGVPQVILPDGWDTGVRAQRTQE-FGAGIALPVPE- 387
Query: 408 NIPESDELARLLAQSVDGPR-RERLKARELSGAALSA 443
D+L + + +D P R A + L+
Sbjct: 388 --LTPDQLRESVKRVLDDPAHRAG--AARMRDDMLAE 420
|
| >4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A* Length = 398 | Back alignment and structure |
|---|
Score = 70.9 bits (174), Expect = 2e-13
Identities = 42/227 (18%), Positives = 74/227 (32%), Gaps = 35/227 (15%)
Query: 230 HDRVWAVGPVLP----PDDDLVESMCRGGSSSVPAHDVLTWLDSRRDESVVYVCFGSRYV 285
D + ++ P M R + V +W+ R + + + FG+R
Sbjct: 181 PDPLLSIDVCPPSMEAQPKPGTTKM-RYVPYNGRNDQVPSWVFEERKQPRLCLTFGTRVP 239
Query: 286 LTAKQ--------IHELAAALEKTDVDFVYCVREPDERHASQDCGVLPDGFEDRVAGRGY 337
L + L+ L K + V V + Q LP+G
Sbjct: 240 LPNTNTIPGGLSLLQALSQELPKLGFEVVVAVSDKLA----QTLQPLPEGVL-------- 287
Query: 338 VIRGWSQQVAILRHKAVGAFLTHCGWNSVLEGVSAGVVMLTWPMDADQYTNAQLLVDQLG 397
G AI+ + H G + L +S GV ++ P+ A+ + +A+LL G
Sbjct: 288 -AAGQFPLSAIMPA--CDVVVHHGGHGTTLTCLSEGVPQVSVPVIAEVWDSARLLHA-AG 343
Query: 398 VGIRVGEGTRNIPESDELARLLAQSVDGPR-RERLKARELSGAALSA 443
G+ V + + A+ D AR L+ +
Sbjct: 344 AGVEVPWEQ---AGVESVLAACARIRDDSSYVGN--ARRLAAEMATL 385
|
| >1rrv_A Glycosyltransferase GTFD; GT-B, glycosyltransferase, rossmann fold, glycopeptide, VACO antibiotic, transferase-antibiotic complex; HET: OMZ GHP OMY 3FG TYD BGC; 2.00A {Amycolatopsis orientalis} SCOP: c.87.1.5 Length = 416 | Back alignment and structure |
|---|
Score = 67.2 bits (164), Expect = 3e-12
Identities = 68/450 (15%), Positives = 125/450 (27%), Gaps = 88/450 (19%)
Query: 8 ILVYPFPTSGHIIPLLDLTNRLLTLGLNVTVLITQNNLPLLDSLNANHPSTSLQSLVLPQ 67
+L+ T G + + L +RL LG+ + L + H L ++ Q
Sbjct: 3 VLLSVCGTRGDVEIGVALADRLKALGVQTRMCAPPAAEERLAEVGVPHVPVGLPQHMMLQ 62
Query: 68 PKWPAGSPATRLLKFMRVLRELHYPALLDWFKSHPSPPVAILSDFFLGWTQGLAAELGLP 127
P P + + E+ + A+ + VA+ + +A +LGLP
Sbjct: 63 EGMPPPPPE-EEQRLAAMTVEMQFDAVPGAAEGCA-AVVAVGDLAAATGVRSVAEKLGLP 120
Query: 128 RVVFSPSGAFALSVSFAMWTDLPTNDDPDNVDALVSFPRVPNCPVYPWYQISHLYRTLKE 187
++ P +P P
Sbjct: 121 ------------FFYSVPSP------------VYLASPHLPPAYDEPTTP---------- 146
Query: 188 GDPDWDLHRSNMMANKTSWGIVFNSFAELERVYIDHMKKEMGHDRV-------------- 233
+ + W FA+ ++ + E+G V
Sbjct: 147 ----------GVTDIRVLWEERAARFADRYGPTLNRRRAEIGLPPVEDVFGYGHGERPLL 196
Query: 234 ---WAVGPVLPPDDDLVESMCRGGSSSVPAHDVLTWLDSRRDESVVYVCFGSRYVLTAKQ 290
+ P+ P D + ++ +L + V++ FGS
Sbjct: 197 AADPVLAPLQPDVDAVQTGAWLLSDERPLPPELEAFLAA--GSPPVHIGFGSSSGRGIAD 254
Query: 291 IHE-LAAALEKTDVDFVYCVREPDERHASQDCGVLPDGFEDRVAGRGYVIRGWSQQVAIL 349
+ A+ + + D + I + Q A+
Sbjct: 255 AAKVAVEAIRAQGRRVILSRGWTELVLPD-----DRDDC--------FAIDEVNFQ-ALF 300
Query: 350 RHKAVGAFLTHCGWNSVLEGVSAGVVMLTWPMDADQYTNAQLLVDQLGVGIRVGEGTRNI 409
R V A + H + AGV L P + DQ A + LG+G+ T
Sbjct: 301 RR--VAAVIHHGSAGTEHVATRAGVPQLVIPRNTDQPYFAGRVAA-LGIGVAHDGPT--- 354
Query: 410 PESDELARLLAQSVDGPRRERLKARELSGA 439
P + L+ L + R R A ++G
Sbjct: 355 PTFESLSAALTTVLAPETRAR--AEAVAGM 382
|
| >1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5 Length = 415 | Back alignment and structure |
|---|
Score = 64.9 bits (158), Expect = 1e-11
Identities = 73/443 (16%), Positives = 124/443 (27%), Gaps = 75/443 (16%)
Query: 8 ILVYPFPTSGHIIPLLDLTNRLLTLGLNVTVLITQNNLPLLDSLNANHPSTSLQSLVLPQ 67
+L+ + G PL+ L R+ LG +V + + L + H + Q
Sbjct: 3 VLLATCGSRGDTEPLVALAVRVRDLGADVRMCAPPDCAERLAEVGVPHVPVGPSARAPIQ 62
Query: 68 PKWPAGSPATRLLKFMRVLRELHYPALLDWFKSHPSPPVAILSDFFLGWTQGLAAE-LGL 126
P + R +F + + + V AE LG+
Sbjct: 63 RAKPLTAEDVR--RFTTEAIATQFDEIPAAAE--GCAAVVTTGLLAAAIGVRSVAEKLGI 118
Query: 127 PRVVFSPSGAFALSVSFAMWTDLPTNDDPDNVDALVSFPRVPNCPVYPWYQISHLYRTLK 186
P P P YP
Sbjct: 119 PYFYAFH------------------------------CPSYVPSPYYP-----PPPLGEP 143
Query: 187 EGDPDWDLHRSNMMANKTSW---GIVFNSF-AELERVYIDHMKKEMGHDRVW-AVGPVL- 240
D+ N++++ G + NS + ++ + D W A PVL
Sbjct: 144 STQDTIDIPAQWERNNQSAYQRYGGLLNSHRDAIGLPPVEDIFTFGYTDHPWVAADPVLA 203
Query: 241 PPDDDLVESMCRGG----SSSVPAHDVLTWLDSRRDESVVYVCFGSRYVLTAKQIHELAA 296
P ++++ G + ++ +LD+ VY+ FGS A +
Sbjct: 204 PLQPTDLDAVQTGAWILPDERPLSPELAAFLDA--GPPPVYLGFGSLGA-PADAVRVAID 260
Query: 297 ALEKTDVDFVYCVREPDERHASQDCGVLPDGFEDRVAGRGYVIRGWSQQVAILRHKAVGA 356
A+ + D G + V A
Sbjct: 261 AIRAHGRRVILSRGWAD-----LVLPDDGADCF---------AIGEVNHQVLFGR--VAA 304
Query: 357 FLTHCGWNSVLEGVSAGVVMLTWPMDADQYTNAQLLVDQLGVGIRVGEGTRNIPESDELA 416
+ H G + AG + P ADQ A + + LGVG+ IP D L+
Sbjct: 305 VIHHGGAGTTHVAARAGAPQILLPQMADQPYYAGRVAE-LGVGVAH---DGPIPTFDSLS 360
Query: 417 RLLAQSVDGPRRERLKARELSGA 439
LA ++ R A ++G
Sbjct: 361 AALATALTPETHAR--ATAVAGT 381
|
| >3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} PDB: 3h4i_A* 1pn3_A* 1pnv_A* Length = 404 | Back alignment and structure |
|---|
Score = 56.8 bits (137), Expect = 7e-09
Identities = 39/205 (19%), Positives = 62/205 (30%), Gaps = 29/205 (14%)
Query: 239 VLPPDDDLVESMCRGG----SSSVPAHDVLTWLDSRRDESVVYVCFGSRYVLTAKQIHEL 294
+ P + ++ G + ++ +L + VYV FGS A+
Sbjct: 185 LSPLRPTDLGTVQTGAWILPDQRPLSAELEGFLRA--GSPPVYVGFGSGPA-PAEAARVA 241
Query: 295 AAALEKTDVDFVYCVREPDERHASQDCGVLPDGFEDRVAGRGYVIRGWSQQVAILRHKAV 354
A+ V D + G + V
Sbjct: 242 IEAVRAQGRRVVLSSGWAGLGRID-----EGDDCL---------VVGEVNHQVLFGR--V 285
Query: 355 GAFLTHCGWNSVLEGVSAGVVMLTWPMDADQYTNAQLLVDQLGVGIRVGEGTRNIPESDE 414
A + H G + AG + P ADQ A V LGVG+ T P +
Sbjct: 286 AAVVHHGGAGTTTAVTRAGAPQVVVPQKADQPYYAG-RVADLGVGVAHDGPT---PTVES 341
Query: 415 LARLLAQSVDGPRRERLKARELSGA 439
L+ LA ++ R R A ++G
Sbjct: 342 LSAALATALTPGIRAR--AAAVAGT 364
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 52.5 bits (125), Expect = 2e-07
Identities = 59/310 (19%), Positives = 97/310 (31%), Gaps = 69/310 (22%)
Query: 30 LTLGLNVT---VLITQNNLPLLDSLNANHPSTSLQSLVLPQPKWPAGSPATRLLKFMR-- 84
L L + VL L L ++ N S S S + + RLLK
Sbjct: 187 LNLKNCNSPETVLEMLQKL--LYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYE 244
Query: 85 ----VLRELHYPALLDWFKSHPSPPVAIL--------SDFFLGWTQGLAAELGLPRVVFS 132
VL + + F IL +DF L L + +
Sbjct: 245 NCLLVLLNVQNAKAWNAFNLS----CKILLTTRFKQVTDF-LSAATTTHISLDHHSMTLT 299
Query: 133 PSGAFALSVSFAMWTDLPTNDDPDNVDALVSFPRVPNCPVYPWYQISHLYRTLKEGDPDW 192
P +L + D D P + L + PR +S + ++++G W
Sbjct: 300 PDEVKSL---LLKYLDCRPQDLP--REVLTTNPRR----------LSIIAESIRDGLATW 344
Query: 193 DLHRSNMMANKTSWGIVFNSFAELERVYIDHMKKEMGHDRVWAVGPVLPPDDDLVESMCR 252
D + T+ I+ +S LE M + V PP
Sbjct: 345 DNWKHVNCDKLTT--IIESSLNVLEPAEYRKMFDRLS---------VFPPS--------- 384
Query: 253 GGSSSVPAHDVLT--WLDSRRDESVVYVCFGSRYVLTAKQIHELAAALEKTDVDFVYCVR 310
+ +P +L+ W D + + +V V +Y L KQ E ++ + V+
Sbjct: 385 ---AHIPT-ILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTISIP--SIYLELKVK 438
Query: 311 EPDER--HAS 318
+E H S
Sbjct: 439 LENEYALHRS 448
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 473 | |||
| 3hbf_A | 454 | Flavonoid 3-O-glucosyltransferase; glycosyltransfe | 100.0 | |
| 2vch_A | 480 | Hydroquinone glucosyltransferase; glycosyltransfer | 100.0 | |
| 2acv_A | 463 | Triterpene UDP-glucosyl transferase UGT71G1; glyco | 100.0 | |
| 2pq6_A | 482 | UDP-glucuronosyl/UDP-glucosyltransferase; glycosyl | 100.0 | |
| 2c1x_A | 456 | UDP-glucose flavonoid 3-O glycosyltransferase; WIN | 100.0 | |
| 2iya_A | 424 | OLEI, oleandomycin glycosyltransferase; carbohydra | 100.0 | |
| 4amg_A | 400 | Snogd; transferase, polyketide biosynthesis, GT1 f | 100.0 | |
| 1iir_A | 415 | Glycosyltransferase GTFB; rossmann fold; 1.80A {Am | 100.0 | |
| 1rrv_A | 416 | Glycosyltransferase GTFD; GT-B, glycosyltransferas | 100.0 | |
| 3rsc_A | 415 | CALG2; TDP, enediyne, structural genomics, PSI-2, | 100.0 | |
| 3h4t_A | 404 | Glycosyltransferase GTFA, glycosyltransferase; van | 100.0 | |
| 3ia7_A | 402 | CALG4; glycosysltransferase, calicheamicin, enediy | 100.0 | |
| 2yjn_A | 441 | ERYCIII, glycosyltransferase; transferase, cytochr | 100.0 | |
| 2iyf_A | 430 | OLED, oleandomycin glycosyltransferase; antibiotic | 100.0 | |
| 2p6p_A | 384 | Glycosyl transferase; X-RAY-diffraction,urdamycina | 100.0 | |
| 3oti_A | 398 | CALG3; calicheamicin, TDP, structural genomics, PS | 100.0 | |
| 4fzr_A | 398 | SSFS6; structural genomics, PSI-biology, protein s | 100.0 | |
| 3tsa_A | 391 | SPNG, NDP-rhamnosyltransferase; glycosyltransferas | 100.0 | |
| 3otg_A | 412 | CALG1; calicheamicin, TDP, structural genomics, PS | 100.0 | |
| 3s2u_A | 365 | UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape | 99.96 | |
| 2o6l_A | 170 | UDP-glucuronosyltransferase 2B7; drug metabolism, | 99.95 | |
| 1f0k_A | 364 | MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pe | 99.87 | |
| 2jzc_A | 224 | UDP-N-acetylglucosamine transferase subunit ALG13; | 99.61 | |
| 3hbm_A | 282 | UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter je | 99.61 | |
| 1v4v_A | 376 | UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, t | 99.45 | |
| 3okp_A | 394 | GDP-mannose-dependent alpha-(1-6)-phosphatidylino | 99.42 | |
| 3c48_A | 438 | Predicted glycosyltransferases; retaining glycosyl | 99.4 | |
| 3dzc_A | 396 | UDP-N-acetylglucosamine 2-epimerase; structural ge | 99.38 | |
| 2gek_A | 406 | Phosphatidylinositol mannosyltransferase (PIMA); G | 99.32 | |
| 1vgv_A | 384 | UDP-N-acetylglucosamine 2-epimerase; structural ge | 99.32 | |
| 3ot5_A | 403 | UDP-N-acetylglucosamine 2-epimerase; structural ge | 99.29 | |
| 3fro_A | 439 | GLGA glycogen synthase; glycosyltransferase family | 99.24 | |
| 2r60_A | 499 | Glycosyl transferase, group 1; rossmann-fold; 1.80 | 99.22 | |
| 2jjm_A | 394 | Glycosyl transferase, group 1 family protein; anth | 99.22 | |
| 3beo_A | 375 | UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, a | 99.14 | |
| 4hwg_A | 385 | UDP-N-acetylglucosamine 2-epimerase; ssgcid, struc | 99.12 | |
| 2iw1_A | 374 | Lipopolysaccharide core biosynthesis protein RFAG; | 99.08 | |
| 2x6q_A | 416 | Trehalose-synthase TRET; biosynthetic protein; 2.2 | 98.95 | |
| 2iuy_A | 342 | Avigt4, glycosyltransferase; antibiotics, family G | 98.92 | |
| 1rzu_A | 485 | Glycogen synthase 1; glycosyl-transferase, GT-B fo | 98.68 | |
| 3s28_A | 816 | Sucrose synthase 1; glycosyltransferase, sucrose m | 98.63 | |
| 3oy2_A | 413 | Glycosyltransferase B736L; rossmann fold, GDP-mann | 98.58 | |
| 2vsy_A | 568 | XCC0866; transferase, glycosyl transferase, GT-B, | 98.55 | |
| 2qzs_A | 485 | Glycogen synthase; glycosyl-transferase, GT-B fold | 98.54 | |
| 2xci_A | 374 | KDO-transferase, 3-deoxy-D-manno-2-octulosonic aci | 98.35 | |
| 2f9f_A | 177 | First mannosyl transferase (WBAZ-1); alpha-beta pr | 98.21 | |
| 2hy7_A | 406 | Glucuronosyltransferase GUMK; glycosyltransferases | 97.99 | |
| 3tov_A | 349 | Glycosyl transferase family 9; structural genomics | 97.73 | |
| 1psw_A | 348 | ADP-heptose LPS heptosyltransferase II; structural | 97.63 | |
| 4gyw_A | 723 | UDP-N-acetylglucosamine--peptide N- acetylglucosam | 97.54 | |
| 3qhp_A | 166 | Type 1 capsular polysaccharide biosynthesis prote | 97.54 | |
| 2bfw_A | 200 | GLGA glycogen synthase; glycosyltransferase family | 97.52 | |
| 3q3e_A | 631 | HMW1C-like glycosyltransferase; N-glycosylation; 2 | 97.24 | |
| 3rhz_A | 339 | GTF3, nucleotide sugar synthetase-like protein; gl | 97.12 | |
| 2gt1_A | 326 | Lipopolysaccharide heptosyltransferase-1; GT-B fol | 95.97 | |
| 2wqk_A | 251 | 5'-nucleotidase SURE; SURE protein, putative acid | 94.89 | |
| 2phj_A | 251 | 5'-nucleotidase SURE; SURE protein, putative acid | 93.76 | |
| 2x0d_A | 413 | WSAF; GT4 family, transferase; HET: MSE; 2.28A {Ge | 93.66 | |
| 3vue_A | 536 | GBSS-I, granule-bound starch synthase 1, chloropla | 92.8 | |
| 2ywr_A | 216 | Phosphoribosylglycinamide formyltransferase; rossm | 89.61 | |
| 1g5t_A | 196 | COB(I)alamin adenosyltransferase; P-loop protein, | 89.59 | |
| 3av3_A | 212 | Phosphoribosylglycinamide formyltransferase; struc | 87.13 | |
| 3dfu_A | 232 | Uncharacterized protein from 6-phosphogluconate de | 84.88 | |
| 3ih5_A | 217 | Electron transfer flavoprotein alpha-subunit; alph | 84.07 | |
| 3ty2_A | 261 | 5'-nucleotidase SURE; surviVal protein, phosphatas | 83.88 | |
| 1uqt_A | 482 | Alpha, alpha-trehalose-phosphate synthase; glycosy | 83.82 | |
| 4dim_A | 403 | Phosphoribosylglycinamide synthetase; structural g | 83.81 | |
| 3auf_A | 229 | Glycinamide ribonucleotide transformylase 1; struc | 83.54 | |
| 3ug7_A | 349 | Arsenical pump-driving ATPase; tail-anchored, memb | 82.96 | |
| 3n7t_A | 247 | Macrophage binding protein; seattle structural gen | 82.78 | |
| 3lyu_A | 142 | Putative hydrogenase; the C-terminal has AN alpha- | 82.74 | |
| 1j9j_A | 247 | Stationary phase surviVal protein; SURE protein, u | 81.92 | |
| 2x0d_A | 413 | WSAF; GT4 family, transferase; HET: MSE; 2.28A {Ge | 81.61 | |
| 2bw0_A | 329 | 10-FTHFDH, 10-formyltetrahydrofolate dehydrogenase | 81.31 | |
| 1l5x_A | 280 | SurviVal protein E; structural genomics, putative | 80.82 |
| >3hbf_A Flavonoid 3-O-glucosyltransferase; glycosyltransferase, GT-B fold, GT1, phenylpropanoid metabolism; HET: UDP MYC; 2.10A {Medicago truncatula} SCOP: c.87.1.0 PDB: 3hbj_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-66 Score=517.93 Aligned_cols=431 Identities=23% Similarity=0.322 Sum_probs=345.1
Q ss_pred ccEEEEEcCCCCCChHHHHHHHHHHHhCC--CeEEEEeCCCChhhhhhhccCCCCCCeeEEEcCCCCCCCCC----Chhh
Q 042753 5 GAHILVYPFPTSGHIIPLLDLTNRLLTLG--LNVTVLITQNNLPLLDSLNANHPSTSLQSLVLPQPKWPAGS----PATR 78 (473)
Q Consensus 5 ~~~Il~~~~~~~GH~~p~l~La~~L~~rG--h~Vt~~~~~~~~~~i~~~~~~~~~~~~~f~~l~~~~~~~~~----~~~~ 78 (473)
..||+++|+|++||++|++.||+.|++|| +.|||++++.+...+.+.... ..++++|..+|..-.++.. +...
T Consensus 13 ~~hvv~~P~p~~GHi~P~l~Lak~L~~~g~~~~vT~~~t~~~~~~~~~~~~~-~~~~i~~~~ipdglp~~~~~~~~~~~~ 91 (454)
T 3hbf_A 13 LLHVAVLAFPFGTHAAPLLSLVKKIATEAPKVTFSFFCTTTTNDTLFSRSNE-FLPNIKYYNVHDGLPKGYVSSGNPREP 91 (454)
T ss_dssp CCEEEEECCCSSSSHHHHHHHHHHHHHHCTTSEEEEEECHHHHHHSCSSSSC-CCTTEEEEECCCCCCTTCCCCSCTTHH
T ss_pred CCEEEEEcCCcccHHHHHHHHHHHHHhCCCCEEEEEEeCHHHHHhhhccccc-CCCCceEEecCCCCCCCccccCChHHH
Confidence 47999999999999999999999999999 999999998665555433211 1247999999832111111 1233
Q ss_pred HHHHHHHHHHHhhHHHHHHHhcCCCCCcEEEeCCCcchHHHHHHHhCCCcEEEecchHHHHHHHHhhhccCCCCCC-CCC
Q 042753 79 LLKFMRVLRELHYPALLDWFKSHPSPPVAILSDFFLGWTQGLAAELGLPRVVFSPSGAFALSVSFAMWTDLPTNDD-PDN 157 (473)
Q Consensus 79 ~~~~~~~~~~~~~~~l~~~l~~~~~~pD~VV~D~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~p~~~~-~~~ 157 (473)
+..+...+...+.+.+.+++++...++||||+|.+++|+..+|+++|||++.|++++++.+..+.+.......... ...
T Consensus 92 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~iI~D~~~~w~~~vA~~lgIP~~~f~t~~a~~~~~~~~~~~~~~~~~~~~~~ 171 (454)
T 3hbf_A 92 IFLFIKAMQENFKHVIDEAVAETGKNITCLVTDAFFWFGADLAEEMHAKWVPLWTAGPHSLLTHVYTDLIREKTGSKEVH 171 (454)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEETTCTTHHHHHHHTTCEEEEEECSCHHHHHHHHTHHHHHHTCCHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCCCcEEEECCcchHHHHHHHHhCCCEEEEeCccHHHHHHHHhhHHHHhhcCCCccc
Confidence 4445555544555666666655323799999999999999999999999999999999988877664331100000 001
Q ss_pred CCcc-ccCCCCCCCCCCCccccchhhhccCCCCCchHHHHHHhhhccCCcEEeecchHHhhHHHHHHHHHhhCCCcEEEe
Q 042753 158 VDAL-VSFPRVPNCPVYPWYQISHLYRTLKEGDPDWDLHRSNMMANKTSWGIVFNSFAELERVYIDHMKKEMGHDRVWAV 236 (473)
Q Consensus 158 ~~~~-~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~le~~~~~~~~~~~~~~~~~~v 236 (473)
.+.+ ..+|+++. +..++++.++.. .......+++.+......+..++++||+++||+++++.+++.+ |++++|
T Consensus 172 ~~~~~~~iPg~p~---~~~~dlp~~~~~-~~~~~~~~~~~~~~~~~~~~~~vl~ns~~eLE~~~~~~~~~~~--~~v~~v 245 (454)
T 3hbf_A 172 DVKSIDVLPGFPE---LKASDLPEGVIK-DIDVPFATMLHKMGLELPRANAVAINSFATIHPLIENELNSKF--KLLLNV 245 (454)
T ss_dssp TSSCBCCSTTSCC---BCGGGSCTTSSS-CTTSHHHHHHHHHHHHGGGSSCEEESSCGGGCHHHHHHHHTTS--SCEEEC
T ss_pred cccccccCCCCCC---cChhhCchhhcc-CCchHHHHHHHHHHHhhccCCEEEECChhHhCHHHHHHHHhcC--CCEEEE
Confidence 1223 34888875 888888887654 2334456777788888889999999999999999999888765 589999
Q ss_pred ccCCCCCCcchhhccCCCCCCCChhhhHHHhcCCCCCcEEEEEeCCcccCCHHHHHHHHHHHHhCCCcEEEEEeCCCccC
Q 042753 237 GPVLPPDDDLVESMCRGGSSSVPAHDVLTWLDSRRDESVVYVCFGSRYVLTAKQIHELAAALEKTDVDFVYCVREPDERH 316 (473)
Q Consensus 237 Gpl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~V~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~ 316 (473)
||+.... + . .....++++.+|++.++++++|||||||....+.+++.+++.+|++.+++|||+++.+.
T Consensus 246 GPl~~~~-~-----~---~~~~~~~~~~~wLd~~~~~~vVyvsfGS~~~~~~~~~~el~~~l~~~~~~flw~~~~~~--- 313 (454)
T 3hbf_A 246 GPFNLTT-P-----Q---RKVSDEHGCLEWLDQHENSSVVYISFGSVVTPPPHELTALAESLEECGFPFIWSFRGDP--- 313 (454)
T ss_dssp CCHHHHS-C-----C---SCCCCTTCHHHHHHTSCTTCEEEEECCSSCCCCHHHHHHHHHHHHHHCCCEEEECCSCH---
T ss_pred CCccccc-c-----c---ccccchHHHHHHHhcCCCCceEEEecCCCCcCCHHHHHHHHHHHHhCCCeEEEEeCCcc---
Confidence 9997643 2 0 00224568999999888899999999999988899999999999999999999999752
Q ss_pred CcccCCCCchhhHHhhcCCCeEeecCccHHHhhhccCccceeeccCchhHHHHHhhCCeEecCcccccchhhHHHHHHHh
Q 042753 317 ASQDCGVLPDGFEDRVAGRGYVIRGWSQQVAILRHKAVGAFLTHCGWNSVLEGVSAGVVMLTWPMDADQYTNAQLLVDQL 396 (473)
Q Consensus 317 ~~~~~~~lp~~~~~~~~~~nv~v~~~~pq~~lL~~~~v~~~ItHgG~~s~~eal~~GvP~l~~P~~~DQ~~na~rv~~~~ 396 (473)
.+.+|++|.++.. +|+++++|+||.+||+|+++++|||||||||++||+++|||||++|++.||+.||+++++.+
T Consensus 314 ----~~~lp~~~~~~~~-~~~~vv~w~Pq~~vL~h~~v~~fvtH~G~~S~~Eal~~GvP~i~~P~~~DQ~~Na~~v~~~~ 388 (454)
T 3hbf_A 314 ----KEKLPKGFLERTK-TKGKIVAWAPQVEILKHSSVGVFLTHSGWNSVLECIVGGVPMISRPFFGDQGLNTILTESVL 388 (454)
T ss_dssp ----HHHSCTTHHHHTT-TTEEEESSCCHHHHHHSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHTTS
T ss_pred ----hhcCCHhHHhhcC-CceEEEeeCCHHHHHhhcCcCeEEecCCcchHHHHHHcCCCEecCcccccHHHHHHHHHHhh
Confidence 1358888887765 57777799999999999999999999999999999999999999999999999999999657
Q ss_pred cceEEeccCCCCCCCHHHHHHHHHHHhCCc--HHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHH
Q 042753 397 GVGIRVGEGTRNIPESDELARLLAQSVDGP--RRERLKARELSGAALSAVVKGGSSDRDLNDFIKRIN 462 (473)
Q Consensus 397 G~G~~l~~~~~~~~~~~~l~~~i~~~l~~~--~~~~~~a~~~~~~~~~~~~~~gs~~~~~~~~~~~~~ 462 (473)
|+|+.++ ...+++++|.++|+++|+++ ++||++|+++++.+++++.+||||++++++|++++.
T Consensus 389 g~Gv~l~---~~~~~~~~l~~av~~ll~~~~~~~~r~~a~~l~~~~~~a~~~gGsS~~~l~~~v~~i~ 453 (454)
T 3hbf_A 389 EIGVGVD---NGVLTKESIKKALELTMSSEKGGIMRQKIVKLKESAFKAVEQNGTSAMDFTTLIQIVT 453 (454)
T ss_dssp CSEEECG---GGSCCHHHHHHHHHHHHSSHHHHHHHHHHHHHHHHHHHHTSTTSHHHHHHHHHHHHHT
T ss_pred CeeEEec---CCCCCHHHHHHHHHHHHCCChHHHHHHHHHHHHHHHHHhhccCCCHHHHHHHHHHHHh
Confidence 9999998 77899999999999999874 489999999999999999999999999999999874
|
| >2vch_A Hydroquinone glucosyltransferase; glycosyltransferase, N-glucosyltransferase, UDP-glucose- dependent, plant glycosyltransferase; HET: UDP; 1.45A {Arabidopsis thaliana} SCOP: c.87.1.10 PDB: 2vce_A* 2vg8_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.7e-62 Score=491.98 Aligned_cols=440 Identities=28% Similarity=0.442 Sum_probs=327.8
Q ss_pred ccEEEEEcCCCCCChHHHHHHHHHHHhC-CCeEEEEeCCC--ChhhhhhhccCCCCCCeeEEEcCCCCCCCCCCh-hhHH
Q 042753 5 GAHILVYPFPTSGHIIPLLDLTNRLLTL-GLNVTVLITQN--NLPLLDSLNANHPSTSLQSLVLPQPKWPAGSPA-TRLL 80 (473)
Q Consensus 5 ~~~Il~~~~~~~GH~~p~l~La~~L~~r-Gh~Vt~~~~~~--~~~~i~~~~~~~~~~~~~f~~l~~~~~~~~~~~-~~~~ 80 (473)
++||+++|+|++||++|+++||++|++| ||+|||++++. +...+.+... ....+++|+.++.......... ..+.
T Consensus 6 ~~~vl~~p~p~~GHv~P~l~La~~L~~r~Gh~Vt~~t~~~~~~~~~~~~~~~-~~~~~i~~~~l~~~~~~~~~~~~~~~~ 84 (480)
T 2vch_A 6 TPHVAIIPSPGMGHLIPLVEFAKRLVHLHGLTVTFVIAGEGPPSKAQRTVLD-SLPSSISSVFLPPVDLTDLSSSTRIES 84 (480)
T ss_dssp CCEEEEECCSCHHHHHHHHHHHHHHHHHHCCEEEEEECCSSSCC-CHHHHHC--CCTTEEEEECCCCCCTTSCTTCCHHH
T ss_pred CcEEEEecCcchhHHHHHHHHHHHHHhCCCCEEEEEECCCcchhhhhhhhcc-ccCCCceEEEcCCCCCCCCCCchhHHH
Confidence 5799999999999999999999999998 99999999987 4444443211 0024799999885421111111 2222
Q ss_pred HHHHHHHHHhhHHHHHHHhcC--CCCC-cEEEeCCCcchHHHHHHHhCCCcEEEecchHHHHHHHHhhhcc---CCCCCC
Q 042753 81 KFMRVLRELHYPALLDWFKSH--PSPP-VAILSDFFLGWTQGLAAELGLPRVVFSPSGAFALSVSFAMWTD---LPTNDD 154 (473)
Q Consensus 81 ~~~~~~~~~~~~~l~~~l~~~--~~~p-D~VV~D~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~---~p~~~~ 154 (473)
.+...+. ...+.+.+++++. ..++ ||||+|.++.|+..+|+++|||++.++++++.....+.+.... .+. .
T Consensus 85 ~~~~~~~-~~~~~l~~ll~~~~~~~~~pd~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~~--~ 161 (480)
T 2vch_A 85 RISLTVT-RSNPELRKVFDSFVEGGRLPTALVVDLFGTDAFDVAVEFHVPPYIFYPTTANVLSFFLHLPKLDETVSC--E 161 (480)
T ss_dssp HHHHHHH-TTHHHHHHHHHHHHHTTCCCSEEEECTTCGGGHHHHHHTTCCEEEEECSCHHHHHHHHHHHHHHHHCCS--C
T ss_pred HHHHHHH-hhhHHHHHHHHHhccCCCCCeEEEECCcchhHHHHHHHcCCCEEEEECccHHHHHHHHHHHHHHhcCCC--c
Confidence 2333333 4556677777652 1177 9999999999999999999999999999998766665443311 100 0
Q ss_pred CCCCCccccCCCCCCCCCCCccccchhhhccCCCCCchHHHHHHhhhccCCcEEeecchHHhhHHHHHHHHHhh--CCCc
Q 042753 155 PDNVDALVSFPRVPNCPVYPWYQISHLYRTLKEGDPDWDLHRSNMMANKTSWGIVFNSFAELERVYIDHMKKEM--GHDR 232 (473)
Q Consensus 155 ~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~le~~~~~~~~~~~--~~~~ 232 (473)
......+..+|+++. +...+++..+... .....+.+.+......+..++++||+.++|+..++.+.+.. . ++
T Consensus 162 ~~~~~~~~~~Pg~~p---~~~~~l~~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~nt~~ele~~~~~~l~~~~~~~-~~ 235 (480)
T 2vch_A 162 FRELTEPLMLPGCVP---VAGKDFLDPAQDR--KDDAYKWLLHNTKRYKEAEGILVNTFFELEPNAIKALQEPGLDK-PP 235 (480)
T ss_dssp GGGCSSCBCCTTCCC---BCGGGSCGGGSCT--TSHHHHHHHHHHHHGGGCSEEEESCCTTTSHHHHHHHHSCCTTC-CC
T ss_pred ccccCCcccCCCCCC---CChHHCchhhhcC--CchHHHHHHHHHHhcccCCEEEEcCHHHHhHHHHHHHHhcccCC-Cc
Confidence 000012334566653 4555555543221 11234445555666778899999999999998888776421 2 58
Q ss_pred EEEeccCCCCCCcchhhccCCCCCCCChhhhHHHhcCCCCCcEEEEEeCCcccCCHHHHHHHHHHHHhCCCcEEEEEeCC
Q 042753 233 VWAVGPVLPPDDDLVESMCRGGSSSVPAHDVLTWLDSRRDESVVYVCFGSRYVLTAKQIHELAAALEKTDVDFVYCVREP 312 (473)
Q Consensus 233 ~~~vGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~V~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~ 312 (473)
+++|||+.... . ... .+..++++.+|++.++++++|||||||....+.+++.+++++|++.+++|||+++..
T Consensus 236 v~~vGpl~~~~-~----~~~---~~~~~~~~~~wLd~~~~~~vvyvs~GS~~~~~~~~~~~~~~al~~~~~~~lw~~~~~ 307 (480)
T 2vch_A 236 VYPVGPLVNIG-K----QEA---KQTEESECLKWLDNQPLGSVLYVSFGSGGTLTCEQLNELALGLADSEQRFLWVIRSP 307 (480)
T ss_dssp EEECCCCCCCS-C----SCC--------CHHHHHHHTSCTTCEEEEECTTTCCCCHHHHHHHHHHHHHTTCEEEEEECCC
T ss_pred EEEEecccccc-c----ccc---CccchhHHHHHhcCCCCCceEEEecccccCCCHHHHHHHHHHHHhcCCcEEEEECCc
Confidence 99999998654 2 000 022457899999997789999999999988889999999999999999999999874
Q ss_pred CccC----C----cccC-CCCchhhHHhhcCCCeEeecCccHHHhhhccCccceeeccCchhHHHHHhhCCeEecCcccc
Q 042753 313 DERH----A----SQDC-GVLPDGFEDRVAGRGYVIRGWSQQVAILRHKAVGAFLTHCGWNSVLEGVSAGVVMLTWPMDA 383 (473)
Q Consensus 313 ~~~~----~----~~~~-~~lp~~~~~~~~~~nv~v~~~~pq~~lL~~~~v~~~ItHgG~~s~~eal~~GvP~l~~P~~~ 383 (473)
.... + +.+. +.+|++|.++....++++.+|+||.+||+|+++++|||||||||++||+++|||||++|++.
T Consensus 308 ~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~g~~v~~w~Pq~~vL~h~~v~~fvtHgG~~S~~Eal~~GvP~i~~P~~~ 387 (480)
T 2vch_A 308 SGIANSSYFDSHSQTDPLTFLPPGFLERTKKRGFVIPFWAPQAQVLAHPSTGGFLTHCGWNSTLESVVSGIPLIAWPLYA 387 (480)
T ss_dssp CSSTTTTTTCC--CSCGGGGSCTTHHHHTTTTEEEEESCCCHHHHHHSTTEEEEEECCCHHHHHHHHHHTCCEEECCCST
T ss_pred cccccccccccccccchhhhcCHHHHHHhCCCeEEEeCccCHHHHhCCCCcCeEEecccchhHHHHHHcCCCEEeccccc
Confidence 2000 0 0111 35899999988888888877999999999999999999999999999999999999999999
Q ss_pred cchhhHHHHHHHhcceEEeccCCCCCCCHHHHHHHHHHHhC---CcHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHH
Q 042753 384 DQYTNAQLLVDQLGVGIRVGEGTRNIPESDELARLLAQSVD---GPRRERLKARELSGAALSAVVKGGSSDRDLNDFIKR 460 (473)
Q Consensus 384 DQ~~na~rv~~~~G~G~~l~~~~~~~~~~~~l~~~i~~~l~---~~~~~~~~a~~~~~~~~~~~~~~gs~~~~~~~~~~~ 460 (473)
||+.||+++++.+|+|+.++..+...+++++|+++|+++|+ ++ +||++|+++++.+++++.+||++..++++|+++
T Consensus 388 DQ~~na~~l~~~~G~g~~l~~~~~~~~~~~~l~~av~~vl~~~~~~-~~r~~a~~l~~~~~~a~~~gGss~~~~~~~v~~ 466 (480)
T 2vch_A 388 EQKMNAVLLSEDIRAALRPRAGDDGLVRREEVARVVKGLMEGEEGK-GVRNKMKELKEAACRVLKDDGTSTKALSLVALK 466 (480)
T ss_dssp THHHHHHHHHHTTCCEECCCCCTTSCCCHHHHHHHHHHHHTSTHHH-HHHHHHHHHHHHHHHHTSTTSHHHHHHHHHHHH
T ss_pred cchHHHHHHHHHhCeEEEeecccCCccCHHHHHHHHHHHhcCcchH-HHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHH
Confidence 99999999854779999998211127999999999999998 54 999999999999998888999999999999999
Q ss_pred HHh
Q 042753 461 INE 463 (473)
Q Consensus 461 ~~~ 463 (473)
+++
T Consensus 467 ~~~ 469 (480)
T 2vch_A 467 WKA 469 (480)
T ss_dssp HHH
T ss_pred HHH
Confidence 876
|
| >2acv_A Triterpene UDP-glucosyl transferase UGT71G1; glycosyltransferase; HET: UDP; 2.00A {Medicago truncatula} SCOP: c.87.1.10 PDB: 2acw_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.7e-60 Score=475.58 Aligned_cols=430 Identities=27% Similarity=0.448 Sum_probs=326.9
Q ss_pred ccEEEEEcCCCCCChHHHHHHHHHHHhC--CCeEEEEeCCCCh-----hhhhhhccCCCCCCeeEEEcCCCCCCCCC--C
Q 042753 5 GAHILVYPFPTSGHIIPLLDLTNRLLTL--GLNVTVLITQNNL-----PLLDSLNANHPSTSLQSLVLPQPKWPAGS--P 75 (473)
Q Consensus 5 ~~~Il~~~~~~~GH~~p~l~La~~L~~r--Gh~Vt~~~~~~~~-----~~i~~~~~~~~~~~~~f~~l~~~~~~~~~--~ 75 (473)
.+||+++|+|++||++|++.||++|++| ||+|||++++.+. ..+.+. . ...++++|..+|........ .
T Consensus 9 ~~~vv~~p~p~~GHi~P~l~La~~L~~r~pG~~Vt~v~t~~~~~~~~~~~~~~~-~-~~~~~i~~~~lp~~~~~~~~~~~ 86 (463)
T 2acv_A 9 NSELIFIPAPGIGHLASALEFAKLLTNHDKNLYITVFCIKFPGMPFADSYIKSV-L-ASQPQIQLIDLPEVEPPPQELLK 86 (463)
T ss_dssp CEEEEEECCSSTTTHHHHHHHHHHHHHTCTTEEEEEEECCCTTCCCCHHHHHHH-H-CSCTTEEEEECCCCCCCCGGGGG
T ss_pred CCEEEEEcCcccchHHHHHHHHHHHHhcCCCcEEEEEEcCCcchhhhhhhhhhc-c-cCCCCceEEECCCCCCCcccccC
Confidence 3699999999999999999999999999 9999999998763 222221 1 11247999999854211110 1
Q ss_pred hhhHHHHHHHHHHHhhHHHHHHHhc---CCCCCcEEEeCCCcchHHHHHHHhCCCcEEEecchHHHHHHHHhhhccCCCC
Q 042753 76 ATRLLKFMRVLRELHYPALLDWFKS---HPSPPVAILSDFFLGWTQGLAAELGLPRVVFSPSGAFALSVSFAMWTDLPTN 152 (473)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~l~~~l~~---~~~~pD~VV~D~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~p~~ 152 (473)
..... +...+. ...+.+.+++++ . +|||||+|.++.|+..+|+++|||++.++++++..+..+.+.......
T Consensus 87 ~~~~~-~~~~~~-~~~~~~~~ll~~~~~~--~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~- 161 (463)
T 2acv_A 87 SPEFY-ILTFLE-SLIPHVKATIKTILSN--KVVGLVLDFFCVSMIDVGNEFGIPSYLFLTSNVGFLSLMLSLKNRQIE- 161 (463)
T ss_dssp SHHHH-HHHHHH-HTHHHHHHHHHHHCCT--TEEEEEEEGGGGGGHHHHHHTTCCEEEEESSCHHHHHHHHHGGGSCTT-
T ss_pred CccHH-HHHHHH-hhhHHHHHHHHhccCC--CCeEEEECCcchhHHHHHHHcCCCEEEEeCchHHHHHHHHHHHhhccc-
Confidence 11111 334443 556678888876 5 899999999999999999999999999999998877666554432100
Q ss_pred CCCCCCCc---cccCCCC-CCCCCCCccccchhhhccCCCCCchHHHHHHhhhccCCcEEeecchHHhhHHHHHHHHHhh
Q 042753 153 DDPDNVDA---LVSFPRV-PNCPVYPWYQISHLYRTLKEGDPDWDLHRSNMMANKTSWGIVFNSFAELERVYIDHMKKEM 228 (473)
Q Consensus 153 ~~~~~~~~---~~~~p~l-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~le~~~~~~~~~~~ 228 (473)
........ +..+|++ +. +..++++..+... ...++.+.+......+..++++|||+++|+...+.+.+..
T Consensus 162 ~~~~~~~~~~~~~~~pg~~~~---~~~~~l~~~~~~~---~~~~~~~~~~~~~~~~~~~~l~nt~~ele~~~~~~l~~~~ 235 (463)
T 2acv_A 162 EVFDDSDRDHQLLNIPGISNQ---VPSNVLPDACFNK---DGGYIAYYKLAERFRDTKGIIVNTFSDLEQSSIDALYDHD 235 (463)
T ss_dssp CCCCCSSGGGCEECCTTCSSC---EEGGGSCHHHHCT---TTHHHHHHHHHHHHTTSSEEEESCCHHHHHHHHHHHHHHC
T ss_pred CCCCCccccCceeECCCCCCC---CChHHCchhhcCC---chHHHHHHHHHHhcccCCEEEECCHHHHhHHHHHHHHhcc
Confidence 00111112 4456776 43 4455555444322 2244555556666778889999999999999888877755
Q ss_pred --CCCcEEEeccCCCCCCcchhhccCCCCCCCChhhhHHHhcCCCCCcEEEEEeCCcc-cCCHHHHHHHHHHHHhCCCcE
Q 042753 229 --GHDRVWAVGPVLPPDDDLVESMCRGGSSSVPAHDVLTWLDSRRDESVVYVCFGSRY-VLTAKQIHELAAALEKTDVDF 305 (473)
Q Consensus 229 --~~~~~~~vGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~V~vs~Gs~~-~~~~~~~~~~~~al~~~~~~~ 305 (473)
+ +++++|||+.... .. ......+..++++.+|++.++++++|||||||.. ..+.+++.+++++|++.+++|
T Consensus 236 ~p~-~~v~~vGpl~~~~-~~----~~~~~~~~~~~~~~~wl~~~~~~~vv~vs~GS~~~~~~~~~~~~~~~~l~~~~~~~ 309 (463)
T 2acv_A 236 EKI-PPIYAVGPLLDLK-GQ----PNPKLDQAQHDLILKWLDEQPDKSVVFLCFGSMGVSFGPSQIREIALGLKHSGVRF 309 (463)
T ss_dssp TTS-CCEEECCCCCCSS-CC----CBTTBCHHHHHHHHHHHHTSCTTCEEEEECCSSCCCCCHHHHHHHHHHHHHHTCEE
T ss_pred ccC-CcEEEeCCCcccc-cc----cccccccccchhHHHHHhcCCCCceEEEEeccccccCCHHHHHHHHHHHHhCCCcE
Confidence 5 6899999998654 10 0000001235689999998778899999999998 788889999999999999999
Q ss_pred EEEEeCCCccCCcccCCCCchhhHHhhc-CCCeEeecCccHHHhhhccCccceeeccCchhHHHHHhhCCeEecCccccc
Q 042753 306 VYCVREPDERHASQDCGVLPDGFEDRVA-GRGYVIRGWSQQVAILRHKAVGAFLTHCGWNSVLEGVSAGVVMLTWPMDAD 384 (473)
Q Consensus 306 i~~~~~~~~~~~~~~~~~lp~~~~~~~~-~~nv~v~~~~pq~~lL~~~~v~~~ItHgG~~s~~eal~~GvP~l~~P~~~D 384 (473)
||+++.+. +.+|++|.++.. .+|+++.+|+||.++|+|+++++|||||||||++||+++|||||++|++.|
T Consensus 310 l~~~~~~~--------~~l~~~~~~~~~~~~~~~v~~w~pq~~vL~h~~~~~fvth~G~~s~~Eal~~GvP~i~~P~~~d 381 (463)
T 2acv_A 310 LWSNSAEK--------KVFPEGFLEWMELEGKGMICGWAPQVEVLAHKAIGGFVSHCGWNSILESMWFGVPILTWPIYAE 381 (463)
T ss_dssp EEECCCCG--------GGSCTTHHHHHHHHCSEEEESSCCHHHHHHSTTEEEEEECCCHHHHHHHHHTTCCEEECCCSTT
T ss_pred EEEECCCc--------ccCChhHHHhhccCCCEEEEccCCHHHHhCCCccCeEEecCCchhHHHHHHcCCCeeeccchhh
Confidence 99998741 237778876651 346777799999999999999999999999999999999999999999999
Q ss_pred chhhHHHHHHHhcceEEe-ccCCCC--CCCHHHHHHHHHHHhC-CcHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHH
Q 042753 385 QYTNAQLLVDQLGVGIRV-GEGTRN--IPESDELARLLAQSVD-GPRRERLKARELSGAALSAVVKGGSSDRDLNDFIKR 460 (473)
Q Consensus 385 Q~~na~rv~~~~G~G~~l-~~~~~~--~~~~~~l~~~i~~~l~-~~~~~~~~a~~~~~~~~~~~~~~gs~~~~~~~~~~~ 460 (473)
|+.||+++++.+|+|+.+ ...+.. .+++++|.++|+++|+ ++ +||++|+++++.+++++.+||||++++++|+++
T Consensus 382 Q~~Na~~lv~~~g~g~~l~~~~~~~~~~~~~~~l~~ai~~ll~~~~-~~r~~a~~l~~~~~~a~~~gGss~~~l~~~v~~ 460 (463)
T 2acv_A 382 QQLNAFRLVKEWGVGLGLRVDYRKGSDVVAAEEIEKGLKDLMDKDS-IVHKKVQEMKEMSRNAVVDGGSSLISVGKLIDD 460 (463)
T ss_dssp HHHHHHHHHHTSCCEEESCSSCCTTCCCCCHHHHHHHHHHHTCTTC-THHHHHHHHHHHHHHHTSTTSHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHcCeEEEEecccCCCCccccHHHHHHHHHHHHhccH-HHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHH
Confidence 999999963366999999 311134 6899999999999997 45 899999999999999888999999999999999
Q ss_pred HH
Q 042753 461 IN 462 (473)
Q Consensus 461 ~~ 462 (473)
++
T Consensus 461 ~~ 462 (463)
T 2acv_A 461 IT 462 (463)
T ss_dssp HH
T ss_pred hc
Confidence 85
|
| >2pq6_A UDP-glucuronosyl/UDP-glucosyltransferase; glycosylation, isoflavonoid, uridine diphosphate glycosyltransferase; 2.10A {Medicago truncatula} SCOP: c.87.1.10 | Back alignment and structure |
|---|
Probab=100.00 E-value=7.9e-61 Score=485.25 Aligned_cols=445 Identities=26% Similarity=0.421 Sum_probs=322.4
Q ss_pred ccEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCCCChhhhhhhccCC--C-CCCeeEEEcCCCCCC-C--CCChhh
Q 042753 5 GAHILVYPFPTSGHIIPLLDLTNRLLTLGLNVTVLITQNNLPLLDSLNANH--P-STSLQSLVLPQPKWP-A--GSPATR 78 (473)
Q Consensus 5 ~~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~i~~~~~~~--~-~~~~~f~~l~~~~~~-~--~~~~~~ 78 (473)
.+||+++|+|++||++|++.||++|++|||+|||++++.+...+.+..... . .++++|..++..-.+ . ......
T Consensus 8 ~~~vl~~p~p~~GHi~P~l~La~~L~~rG~~VT~v~t~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~lp~~~~~~~~~~~ 87 (482)
T 2pq6_A 8 KPHVVMIPYPVQGHINPLFKLAKLLHLRGFHITFVNTEYNHKRLLKSRGPKAFDGFTDFNFESIPDGLTPMEGDGDVSQD 87 (482)
T ss_dssp CCEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEEEHHHHHHHC------------CEEEEEECCCCC---------CC
T ss_pred CCEEEEecCccchhHHHHHHHHHHHHhCCCeEEEEeCCchhhhhccccccccccCCCceEEEECCCCCCCcccccCcchh
Confidence 369999999999999999999999999999999999997766554431100 0 137899988732111 0 010122
Q ss_pred HHHHHHHHHHHhhHHHHHHHhcC-----CCCCcEEEeCCCcchHHHHHHHhCCCcEEEecchHHHHHHHHhhh-----cc
Q 042753 79 LLKFMRVLRELHYPALLDWFKSH-----PSPPVAILSDFFLGWTQGLAAELGLPRVVFSPSGAFALSVSFAMW-----TD 148 (473)
Q Consensus 79 ~~~~~~~~~~~~~~~l~~~l~~~-----~~~pD~VV~D~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~-----~~ 148 (473)
+..+...+...+.+.+++++++. ..+|||||+|.++.|+..+|+++|||+|.++++++.....+.+.. .+
T Consensus 88 ~~~~~~~~~~~~~~~l~~ll~~l~~~~~~~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~ 167 (482)
T 2pq6_A 88 VPTLCQSVRKNFLKPYCELLTRLNHSTNVPPVTCLVSDCCMSFTIQAAEEFELPNVLYFSSSACSLLNVMHFRSFVERGI 167 (482)
T ss_dssp HHHHHHHHTTSSHHHHHHHHHHHHTCSSSCCCCEEEEETTCTHHHHHHHHTTCCEEEEECSCHHHHHHHTTHHHHHHTTC
T ss_pred HHHHHHHHHHHhhHHHHHHHHHHhhhccCCCceEEEECCcchhHHHHHHHcCCCEEEEecccHHHHHHHHHHHHHHhcCC
Confidence 33344333224455666666632 128999999999999999999999999999999987665543322 23
Q ss_pred CCCCCCCC--C----CCccccCCCCCCCCCCCccccchhhhccCCCCCchHHHHHHhhhccCCcEEeecchHHhhHHHHH
Q 042753 149 LPTNDDPD--N----VDALVSFPRVPNCPVYPWYQISHLYRTLKEGDPDWDLHRSNMMANKTSWGIVFNSFAELERVYID 222 (473)
Q Consensus 149 ~p~~~~~~--~----~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~le~~~~~ 222 (473)
.|. .... . +.....+|+++. +..++++.++..........+.+........+..++++||++++|++.++
T Consensus 168 ~p~-~~~~~~~~~~~~~~~~~~~~~~~---~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~nt~~~le~~~~~ 243 (482)
T 2pq6_A 168 IPF-KDESYLTNGCLETKVDWIPGLKN---FRLKDIVDFIRTTNPNDIMLEFFIEVADRVNKDTTILLNTFNELESDVIN 243 (482)
T ss_dssp SSC-SSGGGGTSSGGGCBCCSSTTCCS---CBGGGSCGGGCCSCTTCHHHHHHHHHHHTCCTTCCEEESSCGGGGHHHHH
T ss_pred CCC-ccccccccccccCccccCCCCCC---CchHHCchhhccCCcccHHHHHHHHHHHhhccCCEEEEcChHHHhHHHHH
Confidence 343 1100 0 001112444432 44445555443222223334445555566778899999999999999998
Q ss_pred HHHHhhCCCcEEEeccCCCC-CCcchhhccCC--CCCCCChhhhHHHhcCCCCCcEEEEEeCCcccCCHHHHHHHHHHHH
Q 042753 223 HMKKEMGHDRVWAVGPVLPP-DDDLVESMCRG--GSSSVPAHDVLTWLDSRRDESVVYVCFGSRYVLTAKQIHELAAALE 299 (473)
Q Consensus 223 ~~~~~~~~~~~~~vGpl~~~-~~~~~~~~~~~--~~~~~~~~~~~~~l~~~~~~~~V~vs~Gs~~~~~~~~~~~~~~al~ 299 (473)
.+++.+ +++++|||+... ......+.... ...+..+.++.+|++.++++++|||||||....+.+++.+++++|+
T Consensus 244 ~~~~~~--~~v~~VGPl~~~~~~~~~~~~~~~~~~~l~~~~~~~~~wld~~~~~~vv~vs~GS~~~~~~~~~~~~~~~l~ 321 (482)
T 2pq6_A 244 ALSSTI--PSIYPIGPLPSLLKQTPQIHQLDSLDSNLWKEDTECLDWLESKEPGSVVYVNFGSTTVMTPEQLLEFAWGLA 321 (482)
T ss_dssp HHHTTC--TTEEECCCHHHHHHTSTTGGGGCC---------CHHHHHHTTSCTTCEEEEECCSSSCCCHHHHHHHHHHHH
T ss_pred HHHHhC--CcEEEEcCCcccccccccccccccccccccccchHHHHHHhcCCCCceEEEecCCcccCCHHHHHHHHHHHH
Confidence 888766 489999999753 10000000000 0112234568999998778899999999998878888999999999
Q ss_pred hCCCcEEEEEeCCCccCCcccCCCCchhhHHhhcCCCeEeecCccHHHhhhccCccceeeccCchhHHHHHhhCCeEecC
Q 042753 300 KTDVDFVYCVREPDERHASQDCGVLPDGFEDRVAGRGYVIRGWSQQVAILRHKAVGAFLTHCGWNSVLEGVSAGVVMLTW 379 (473)
Q Consensus 300 ~~~~~~i~~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~v~~~~pq~~lL~~~~v~~~ItHgG~~s~~eal~~GvP~l~~ 379 (473)
+.+++|||+++.+.. ......+|++|.++. ++|+++.+|+||.++|+|+++++|||||||||++||+++|||||++
T Consensus 322 ~~~~~~l~~~~~~~~---~~~~~~l~~~~~~~~-~~~~~v~~~~pq~~~L~h~~~~~~vth~G~~s~~Eal~~GvP~i~~ 397 (482)
T 2pq6_A 322 NCKKSFLWIIRPDLV---IGGSVIFSSEFTNEI-ADRGLIASWCPQDKVLNHPSIGGFLTHCGWNSTTESICAGVPMLCW 397 (482)
T ss_dssp HTTCEEEEECCGGGS---TTTGGGSCHHHHHHH-TTTEEEESCCCHHHHHTSTTEEEEEECCCHHHHHHHHHHTCCEEEC
T ss_pred hcCCcEEEEEcCCcc---ccccccCcHhHHHhc-CCCEEEEeecCHHHHhcCCCCCEEEecCCcchHHHHHHcCCCEEec
Confidence 999999999986420 000123788887776 4688888999999999999999999999999999999999999999
Q ss_pred cccccchhhHHHHHHHhcceEEeccCCCCCCCHHHHHHHHHHHhCCc--HHHHHHHHHHHHHHHHHHhcCCChHHHHHHH
Q 042753 380 PMDADQYTNAQLLVDQLGVGIRVGEGTRNIPESDELARLLAQSVDGP--RRERLKARELSGAALSAVVKGGSSDRDLNDF 457 (473)
Q Consensus 380 P~~~DQ~~na~rv~~~~G~G~~l~~~~~~~~~~~~l~~~i~~~l~~~--~~~~~~a~~~~~~~~~~~~~~gs~~~~~~~~ 457 (473)
|++.||+.||+++++.+|+|+.++ .++++++|.++|+++|+|+ ++|+++|+++++.+++++.+||||++++++|
T Consensus 398 P~~~dQ~~na~~~~~~~G~g~~l~----~~~~~~~l~~~i~~ll~~~~~~~~r~~a~~l~~~~~~a~~~gGss~~~l~~~ 473 (482)
T 2pq6_A 398 PFFADQPTDCRFICNEWEIGMEID----TNVKREELAKLINEVIAGDKGKKMKQKAMELKKKAEENTRPGGCSYMNLNKV 473 (482)
T ss_dssp CCSTTHHHHHHHHHHTSCCEEECC----SSCCHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHTSTTCHHHHHHHHH
T ss_pred CcccchHHHHHHHHHHhCEEEEEC----CCCCHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHH
Confidence 999999999999975569999996 3699999999999999986 2599999999999999999999999999999
Q ss_pred HHHHHh
Q 042753 458 IKRINE 463 (473)
Q Consensus 458 ~~~~~~ 463 (473)
+++++.
T Consensus 474 v~~~~~ 479 (482)
T 2pq6_A 474 IKDVLL 479 (482)
T ss_dssp HHHTTC
T ss_pred HHHHHh
Confidence 998754
|
| >2c1x_A UDP-glucose flavonoid 3-O glycosyltransferase; WINE, catalysis, glycosylation; HET: UDP B3P; 1.9A {Vitis vinifera} SCOP: c.87.1.10 PDB: 2c1z_A* 2c9z_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-59 Score=468.07 Aligned_cols=433 Identities=23% Similarity=0.339 Sum_probs=318.8
Q ss_pred ccEEEEEcCCCCCChHHHHHHHHHHHhCCC--eEEEEeCCCChhhhhhhccCCCCCCeeEEEcCCCCCCCC----CChhh
Q 042753 5 GAHILVYPFPTSGHIIPLLDLTNRLLTLGL--NVTVLITQNNLPLLDSLNANHPSTSLQSLVLPQPKWPAG----SPATR 78 (473)
Q Consensus 5 ~~~Il~~~~~~~GH~~p~l~La~~L~~rGh--~Vt~~~~~~~~~~i~~~~~~~~~~~~~f~~l~~~~~~~~----~~~~~ 78 (473)
++||+++|+|++||++|++.||++|++||| .|||++++.+...+.+...+....+++|..++..-.++. .+...
T Consensus 7 ~~hvv~~p~p~~GHi~P~l~la~~L~~rGh~v~vt~~~t~~~~~~~~~~~~~~~~~~i~~~~i~~glp~~~~~~~~~~~~ 86 (456)
T 2c1x_A 7 NPHVAVLAFPFSTHAAPLLAVVRRLAAAAPHAVFSFFSTSQSNASIFHDSMHTMQCNIKSYDISDGVPEGYVFAGRPQED 86 (456)
T ss_dssp CCEEEEECCCSSSSHHHHHHHHHHHHHHCTTSEEEEEECHHHHHHHC-------CTTEEEEECCCCCCTTCCCCCCTTHH
T ss_pred CCEEEEEcCcccchHHHHHHHHHHHHhCCCCeEEEEEeCchhHHHhhccccccCCCceEEEeCCCCCCCcccccCChHHH
Confidence 689999999999999999999999999965 568888875444333321111124789998863211111 11122
Q ss_pred HHHHHHHHHHHhhHHHHHHHhcCCCCCcEEEeCCCcchHHHHHHHhCCCcEEEecchHHHHHHHHhhhc-----cCCCCC
Q 042753 79 LLKFMRVLRELHYPALLDWFKSHPSPPVAILSDFFLGWTQGLAAELGLPRVVFSPSGAFALSVSFAMWT-----DLPTND 153 (473)
Q Consensus 79 ~~~~~~~~~~~~~~~l~~~l~~~~~~pD~VV~D~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~-----~~p~~~ 153 (473)
+..+...+...+.+.+.+++++...+|||||+|.++.|+..+|+++|||+|.++++++..+..+.+... ..+. .
T Consensus 87 ~~~~~~~~~~~~~~~l~~l~~~~~~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 165 (456)
T 2c1x_A 87 IELFTRAAPESFRQGMVMAVAETGRPVSCLVADAFIWFAADMAAEMGVAWLPFWTAGPNSLSTHVYIDEIREKIGVSG-I 165 (456)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTCCCCEEEEETTSTTHHHHHHHHTCEEEEEECSCHHHHHHHHTHHHHHHHHCSSC-C
T ss_pred HHHHHHHhHHHHHHHHHHHHhccCCCceEEEECCchHhHHHHHHHhCCCEEEEeCccHHHHHHHhhhHHHHhccCCcc-c
Confidence 333433333233344444443311289999999999999999999999999999998876655432211 1111 0
Q ss_pred CCCCCCccccCCCCCCCCCCCccccchhhhccCCCCCchHHHHHHhhhccCCcEEeecchHHhhHHHHHHHHHhhCCCcE
Q 042753 154 DPDNVDALVSFPRVPNCPVYPWYQISHLYRTLKEGDPDWDLHRSNMMANKTSWGIVFNSFAELERVYIDHMKKEMGHDRV 233 (473)
Q Consensus 154 ~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~le~~~~~~~~~~~~~~~~ 233 (473)
..........+|+++. +..++++..+..........+.+.+......+..++++||++++|++.++.+++.+ +++
T Consensus 166 ~~~~~~~~~~~pg~~~---~~~~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~ns~~~le~~~~~~~~~~~--~~~ 240 (456)
T 2c1x_A 166 QGREDELLNFIPGMSK---VRFRDLQEGIVFGNLNSLFSRMLHRMGQVLPKATAVFINSFEELDDSLTNDLKSKL--KTY 240 (456)
T ss_dssp TTCTTCBCTTSTTCTT---CBGGGSCTTTSSSCTTSHHHHHHHHHHHHGGGSSCEEESSCGGGCHHHHHHHHHHS--SCE
T ss_pred ccccccccccCCCCCc---ccHHhCchhhcCCCcccHHHHHHHHHHHhhhhCCEEEECChHHHhHHHHHHHHhcC--CCE
Confidence 0001111224677764 45555554332111112233445555556677889999999999999888888766 489
Q ss_pred EEeccCCCCCCcchhhccCCCCCCCChhhhHHHhcCCCCCcEEEEEeCCcccCCHHHHHHHHHHHHhCCCcEEEEEeCCC
Q 042753 234 WAVGPVLPPDDDLVESMCRGGSSSVPAHDVLTWLDSRRDESVVYVCFGSRYVLTAKQIHELAAALEKTDVDFVYCVREPD 313 (473)
Q Consensus 234 ~~vGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~V~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~ 313 (473)
++|||+.... . . .....+.++.+|++.++++++|||||||....+.+++.+++++|++.+++|||+++.+.
T Consensus 241 ~~vGpl~~~~-~-----~---~~~~~~~~~~~wl~~~~~~~vv~vs~GS~~~~~~~~~~~~~~~l~~~~~~~lw~~~~~~ 311 (456)
T 2c1x_A 241 LNIGPFNLIT-P-----P---PVVPNTTGCLQWLKERKPTSVVYISFGTVTTPPPAEVVALSEALEASRVPFIWSLRDKA 311 (456)
T ss_dssp EECCCHHHHC------------------CHHHHHHTSCTTCEEEEECCSSCCCCHHHHHHHHHHHHHHTCCEEEECCGGG
T ss_pred EEecCcccCc-c-----c---ccccchhhHHHHHhcCCCcceEEEecCccccCCHHHHHHHHHHHHhcCCeEEEEECCcc
Confidence 9999987644 2 0 00122356899999877899999999999888889999999999999999999998752
Q ss_pred ccCCcccCCCCchhhHHhhcCCCeEeecCccHHHhhhccCccceeeccCchhHHHHHhhCCeEecCcccccchhhHHHHH
Q 042753 314 ERHASQDCGVLPDGFEDRVAGRGYVIRGWSQQVAILRHKAVGAFLTHCGWNSVLEGVSAGVVMLTWPMDADQYTNAQLLV 393 (473)
Q Consensus 314 ~~~~~~~~~~lp~~~~~~~~~~nv~v~~~~pq~~lL~~~~v~~~ItHgG~~s~~eal~~GvP~l~~P~~~DQ~~na~rv~ 393 (473)
.+.+|++|.++. ++|+.+.+|+||.++|+|+++++|||||||||++||+++|||||++|++.||+.||++++
T Consensus 312 -------~~~l~~~~~~~~-~~~~~v~~w~pq~~vL~h~~~~~fvth~G~~S~~Eal~~GvP~i~~P~~~dQ~~Na~~l~ 383 (456)
T 2c1x_A 312 -------RVHLPEGFLEKT-RGYGMVVPWAPQAEVLAHEAVGAFVTHCGWNSLWESVAGGVPLICRPFFGDQRLNGRMVE 383 (456)
T ss_dssp -------GGGSCTTHHHHH-TTTEEEESCCCHHHHHTSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHH
T ss_pred -------hhhCCHHHHhhc-CCceEEecCCCHHHHhcCCcCCEEEecCCcchHHHHHHhCceEEecCChhhHHHHHHHHH
Confidence 134788887765 367888899999999999999999999999999999999999999999999999999999
Q ss_pred HHhcceEEeccCCCCCCCHHHHHHHHHHHhCCc--HHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHh
Q 042753 394 DQLGVGIRVGEGTRNIPESDELARLLAQSVDGP--RRERLKARELSGAALSAVVKGGSSDRDLNDFIKRINE 463 (473)
Q Consensus 394 ~~~G~G~~l~~~~~~~~~~~~l~~~i~~~l~~~--~~~~~~a~~~~~~~~~~~~~~gs~~~~~~~~~~~~~~ 463 (473)
+.||+|+.++ ...+++++|.++|+++|+|+ ++|++||+++++.+++++.+||||++++++|++++.+
T Consensus 384 ~~~g~g~~l~---~~~~~~~~l~~~i~~ll~~~~~~~~r~~a~~l~~~~~~a~~~gGsS~~~l~~~v~~~~~ 452 (456)
T 2c1x_A 384 DVLEIGVRIE---GGVFTKSGLMSCFDQILSQEKGKKLRENLRALRETADRAVGPKGSSTENFITLVDLVSK 452 (456)
T ss_dssp HTSCCEEECG---GGSCCHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHTSTTCHHHHHHHHHHHHHTS
T ss_pred HHhCeEEEec---CCCcCHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHHHHhhhcCCcHHHHHHHHHHHHHh
Confidence 6669999998 77899999999999999884 3799999999999999999999999999999998854
|
| >2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-44 Score=360.72 Aligned_cols=394 Identities=18% Similarity=0.176 Sum_probs=269.1
Q ss_pred ccEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCCCChhhhhhhccCCCCCCeeEEEcCCCCCCCC------CCh--
Q 042753 5 GAHILVYPFPTSGHIIPLLDLTNRLLTLGLNVTVLITQNNLPLLDSLNANHPSTSLQSLVLPQPKWPAG------SPA-- 76 (473)
Q Consensus 5 ~~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~i~~~~~~~~~~~~~f~~l~~~~~~~~------~~~-- 76 (473)
|+||++++++++||++|+++||++|+++||+|+|++++.+.+.+.+. +++|..++.....+. +..
T Consensus 12 ~~~Il~~~~~~~GHv~p~l~la~~L~~~Gh~V~~~~~~~~~~~~~~~-------g~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (424)
T 2iya_A 12 PRHISFFNIPGHGHVNPSLGIVQELVARGHRVSYAITDEFAAQVKAA-------GATPVVYDSILPKESNPEESWPEDQE 84 (424)
T ss_dssp CCEEEEECCSCHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHH-------TCEEEECCCCSCCTTCTTCCCCSSHH
T ss_pred cceEEEEeCCCCcccchHHHHHHHHHHCCCeEEEEeCHHHHHHHHhC-------CCEEEecCccccccccchhhcchhHH
Confidence 78999999999999999999999999999999999999887777766 688887764311111 111
Q ss_pred hhHHHHHHHHHHHhhHHHHHHHhcCCCCCcEEEeCCCcchHHHHHHHhCCCcEEEecchHHHHHHHHhhhc-cCCCCCCC
Q 042753 77 TRLLKFMRVLRELHYPALLDWFKSHPSPPVAILSDFFLGWTQGLAAELGLPRVVFSPSGAFALSVSFAMWT-DLPTNDDP 155 (473)
Q Consensus 77 ~~~~~~~~~~~~~~~~~l~~~l~~~~~~pD~VV~D~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~-~~p~~~~~ 155 (473)
..+..+...+. ...+.+.+++++. +||+||+|.+..++..+|+++|||+|.+++.++........... ..+.
T Consensus 85 ~~~~~~~~~~~-~~~~~l~~~l~~~--~pD~VI~d~~~~~~~~~A~~lgIP~v~~~~~~~~~~~~~~~~~~~~~~~---- 157 (424)
T 2iya_A 85 SAMGLFLDEAV-RVLPQLEDAYADD--RPDLIVYDIASWPAPVLGRKWDIPFVQLSPTFVAYEGFEEDVPAVQDPT---- 157 (424)
T ss_dssp HHHHHHHHHHH-HHHHHHHHHTTTS--CCSEEEEETTCTHHHHHHHHHTCCEEEEESSCCCCTTHHHHSGGGSCCC----
T ss_pred HHHHHHHHHHH-HHHHHHHHHHhcc--CCCEEEEcCcccHHHHHHHhcCCCEEEEecccccccccccccccccccc----
Confidence 11122222232 4456788888888 99999999988899999999999999998775421100000000 0000
Q ss_pred CCCCccccCC-CCCCCCCCCccccchhhhccCCCCCchHHHHHH------hhhccCCcEEeecchHHhhHHHHHHHHHhh
Q 042753 156 DNVDALVSFP-RVPNCPVYPWYQISHLYRTLKEGDPDWDLHRSN------MMANKTSWGIVFNSFAELERVYIDHMKKEM 228 (473)
Q Consensus 156 ~~~~~~~~~p-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~s~~~le~~~~~~~~~~~ 228 (473)
.....+...| +......... ..+. ...+ .....+.+.+. ..........+.++.++++++. ..+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~--~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~l~~~~-----~~~ 228 (424)
T 2iya_A 158 ADRGEEAAAPAGTGDAEEGAE-AEDG-LVRF--FTRLSAFLEEHGVDTPATEFLIAPNRCIVALPRTFQIKG-----DTV 228 (424)
T ss_dssp C----------------------HHH-HHHH--HHHHHHHHHHTTCCSCHHHHHHCCSSEEESSCTTTSTTG-----GGC
T ss_pred cccccccccccccccchhhhc-cchh-HHHH--HHHHHHHHHHcCCCCCHHHhccCCCcEEEEcchhhCCCc-----cCC
Confidence 0000000000 0000000000 0000 0000 00000111110 0011134556777777776531 346
Q ss_pred CCCcEEEeccCCCCCCcchhhccCCCCCCCChhhhHHHhcCCCCCcEEEEEeCCcccCCHHHHHHHHHHHHhCCCcEEEE
Q 042753 229 GHDRVWAVGPVLPPDDDLVESMCRGGSSSVPAHDVLTWLDSRRDESVVYVCFGSRYVLTAKQIHELAAALEKTDVDFVYC 308 (473)
Q Consensus 229 ~~~~~~~vGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~V~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~ 308 (473)
+ +++++|||+.... . ...+|++.+.++++|||++||......+.+..+++++++.+.+++|.
T Consensus 229 ~-~~~~~vGp~~~~~-~----------------~~~~~~~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~al~~~~~~~~~~ 290 (424)
T 2iya_A 229 G-DNYTFVGPTYGDR-S----------------HQGTWEGPGDGRPVLLIALGSAFTDHLDFYRTCLSAVDGLDWHVVLS 290 (424)
T ss_dssp C-TTEEECCCCCCCC-G----------------GGCCCCCCCSSCCEEEEECCSSSCCCHHHHHHHHHHHTTCSSEEEEE
T ss_pred C-CCEEEeCCCCCCc-c----------------cCCCCCccCCCCCEEEEEcCCCCcchHHHHHHHHHHHhcCCcEEEEE
Confidence 6 7899999976543 1 11246665567899999999998667788999999999989999999
Q ss_pred EeCCCccCCcccCCCCchhhHHhhcCCCeEeecCccHHHhhhccCccceeeccCchhHHHHHhhCCeEecCcccccchhh
Q 042753 309 VREPDERHASQDCGVLPDGFEDRVAGRGYVIRGWSQQVAILRHKAVGAFLTHCGWNSVLEGVSAGVVMLTWPMDADQYTN 388 (473)
Q Consensus 309 ~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~v~~~~pq~~lL~~~~v~~~ItHgG~~s~~eal~~GvP~l~~P~~~DQ~~n 388 (473)
++... . .+.+. . .++|+.+.+|+||.++|+++++ ||||||+||++||+++|||+|++|...||+.|
T Consensus 291 ~g~~~----~--~~~~~-----~-~~~~v~~~~~~~~~~~l~~~d~--~v~~~G~~t~~Ea~~~G~P~i~~p~~~dQ~~n 356 (424)
T 2iya_A 291 VGRFV----D--PADLG-----E-VPPNVEVHQWVPQLDILTKASA--FITHAGMGSTMEALSNAVPMVAVPQIAEQTMN 356 (424)
T ss_dssp CCTTS----C--GGGGC-----S-CCTTEEEESSCCHHHHHTTCSE--EEECCCHHHHHHHHHTTCCEEECCCSHHHHHH
T ss_pred ECCcC----C--hHHhc-----c-CCCCeEEecCCCHHHHHhhCCE--EEECCchhHHHHHHHcCCCEEEecCccchHHH
Confidence 88642 0 01110 0 2368999999999999999997 99999999999999999999999999999999
Q ss_pred HHHHHHHhcceEEeccCCCCCCCHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHH
Q 042753 389 AQLLVDQLGVGIRVGEGTRNIPESDELARLLAQSVDGPRRERLKARELSGAALSAVVKGGSSDRDLNDFIKRIN 462 (473)
Q Consensus 389 a~rv~~~~G~G~~l~~~~~~~~~~~~l~~~i~~~l~~~~~~~~~a~~~~~~~~~~~~~~gs~~~~~~~~~~~~~ 462 (473)
|++++ ++|+|+.+. .++++.++|.++|+++++|+ +|+++++++++.++ ..++.+++++.+++.+.
T Consensus 357 a~~l~-~~g~g~~~~---~~~~~~~~l~~~i~~ll~~~-~~~~~~~~~~~~~~----~~~~~~~~~~~i~~~~~ 421 (424)
T 2iya_A 357 AERIV-ELGLGRHIP---RDQVTAEKLREAVLAVASDP-GVAERLAAVRQEIR----EAGGARAAADILEGILA 421 (424)
T ss_dssp HHHHH-HTTSEEECC---GGGCCHHHHHHHHHHHHHCH-HHHHHHHHHHHHHH----TSCHHHHHHHHHHHHHH
T ss_pred HHHHH-HCCCEEEcC---cCCCCHHHHHHHHHHHHcCH-HHHHHHHHHHHHHH----hcCcHHHHHHHHHHHHh
Confidence 99999 559999998 67889999999999999997 99999999999985 34667777777766654
|
| >4amg_A Snogd; transferase, polyketide biosynthesis, GT1 family, nogalamyci; HET: MLY; 2.59A {Streptomyces nogalater} PDB: 4an4_A* 4amb_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-43 Score=352.72 Aligned_cols=355 Identities=17% Similarity=0.179 Sum_probs=231.9
Q ss_pred ccEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCCCChhhhhhhccCCCCCCeeEEEcCCCCC-------CC--C-C
Q 042753 5 GAHILVYPFPTSGHIIPLLDLTNRLLTLGLNVTVLITQNNLPLLDSLNANHPSTSLQSLVLPQPKW-------PA--G-S 74 (473)
Q Consensus 5 ~~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~i~~~~~~~~~~~~~f~~l~~~~~-------~~--~-~ 74 (473)
.|||||+++|++||++|+++||++|++|||+|||++++.+...... ++.+..+..... .. . .
T Consensus 22 ~MRIL~~~~p~~GHv~P~l~LA~~L~~rGh~Vt~~t~~~~~~~~~~--------g~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (400)
T 4amg_A 22 SMRALFITSPGLSHILPTVPLAQALRALGHEVRYATGGDIRAVAEA--------GLCAVDVSPGVNYAKLFVPDDTDVTD 93 (400)
T ss_dssp CCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEECSSTHHHHTT--------TCEEEESSTTCCSHHHHSCCC-----
T ss_pred CCeEEEECCCchhHHHHHHHHHHHHHHCCCEEEEEeCcchhhHHhc--------CCeeEecCCchhHhhhcccccccccc
Confidence 5799999999999999999999999999999999999987654332 466665532110 00 0 0
Q ss_pred C---h----hhHHHHHHHHHHHhhHHHHHHHhcCCCCCcEEEeCCCcchHHHHHHHhCCCcEEEecchHHHHHHHHhhhc
Q 042753 75 P---A----TRLLKFMRVLRELHYPALLDWFKSHPSPPVAILSDFFLGWTQGLAAELGLPRVVFSPSGAFALSVSFAMWT 147 (473)
Q Consensus 75 ~---~----~~~~~~~~~~~~~~~~~l~~~l~~~~~~pD~VV~D~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~ 147 (473)
+ . ..+...+..........+.++++++ +||+||+|.+..++..+|+.+|||++.+...+........
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~pD~Vv~d~~~~~~~~~A~~~gip~~~~~~~~~~~~~~~~---- 167 (400)
T 4amg_A 94 PMHSEGLGEGFFAEMFARVSAVAVDGALRTARSW--RPDLVVHTPTQGAGPLTAAALQLPCVELPLGPADSEPGLG---- 167 (400)
T ss_dssp -------CHHHHHHHHHHHHHHHHHHHHHHHHHH--CCSEEEECTTCTHHHHHHHHTTCCEEECCSSTTTCCHHHH----
T ss_pred ccchhhhhHHHHHHHHHHHHHHHHHHHHHHHHhc--CCCEEEECcchHHHHHHHHHcCCCceeecccccccccchh----
Confidence 0 0 1111111222224456677888888 9999999999899999999999999987554322110000
Q ss_pred cCCCCCCCCCCCccccCCCCCCCCCCCccccchhhhccCCCCCchHHHHHHhhhccCCcEEeecchHHhhHHHHHHH-HH
Q 042753 148 DLPTNDDPDNVDALVSFPRVPNCPVYPWYQISHLYRTLKEGDPDWDLHRSNMMANKTSWGIVFNSFAELERVYIDHM-KK 226 (473)
Q Consensus 148 ~~p~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~le~~~~~~~-~~ 226 (473)
..... ...+.+.+................. ...... ..
T Consensus 168 --------------------------------~~~~~-----~l~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~ 206 (400)
T 4amg_A 168 --------------------------------ALIRR-----AMSKDYERHGVTGEPTGSVRLTTTP----PSVEALLPE 206 (400)
T ss_dssp --------------------------------HHHHH-----HTHHHHHHTTCCCCCSCEEEEECCC----HHHHHTSCG
T ss_pred --------------------------------hHHHH-----HHHHHHHHhCCCcccccchhhcccC----chhhccCcc
Confidence 00000 0011111111111111111111110 000000 00
Q ss_pred hhCCCcEEEeccCCCCCCcchhhccCCCCCCCChhhhHHHhcCCCCCcEEEEEeCCcccCC--HHHHHHHHHHHHhCCCc
Q 042753 227 EMGHDRVWAVGPVLPPDDDLVESMCRGGSSSVPAHDVLTWLDSRRDESVVYVCFGSRYVLT--AKQIHELAAALEKTDVD 304 (473)
Q Consensus 227 ~~~~~~~~~vGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~V~vs~Gs~~~~~--~~~~~~~~~al~~~~~~ 304 (473)
....+....+++..... ...+.+|++.+.++++||||+||..... .+.+..+++++++.+.+
T Consensus 207 ~~~~~~~~~~~~~~~~~----------------~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~~~~l~~~~~~ 270 (400)
T 4amg_A 207 DRRSPGAWPMRYVPYNG----------------GAVLPDWLPPAAGRRRIAVTLGSIDALSGGIAKLAPLFSEVADVDAE 270 (400)
T ss_dssp GGCCTTCEECCCCCCCC----------------CEECCTTCSCCTTCCEEEECCCSCC--CCSSSTTHHHHHHGGGSSSE
T ss_pred cccCCcccCcccccccc----------------cccCcccccccCCCcEEEEeCCcccccCccHHHHHHHHHHhhccCce
Confidence 01102233333322222 2334458888788999999999986533 35678899999999999
Q ss_pred EEEEEeCCCccCCcccCCCCchhhHHhhcCCCeEeecCccHHHhhhccCccceeeccCchhHHHHHhhCCeEecCccccc
Q 042753 305 FVYCVREPDERHASQDCGVLPDGFEDRVAGRGYVIRGWSQQVAILRHKAVGAFLTHCGWNSVLEGVSAGVVMLTWPMDAD 384 (473)
Q Consensus 305 ~i~~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~v~~~~pq~~lL~~~~v~~~ItHgG~~s~~eal~~GvP~l~~P~~~D 384 (473)
++|.++... ......+| +|+.+.+|+||.++|+|+++ ||||||+||++||+++|||+|++|++.|
T Consensus 271 ~v~~~~~~~----~~~~~~~~---------~~v~~~~~~p~~~lL~~~~~--~v~h~G~~s~~Eal~~GvP~v~~P~~~d 335 (400)
T 4amg_A 271 FVLTLGGGD----LALLGELP---------ANVRVVEWIPLGALLETCDA--IIHHGGSGTLLTALAAGVPQCVIPHGSY 335 (400)
T ss_dssp EEEECCTTC----CCCCCCCC---------TTEEEECCCCHHHHHTTCSE--EEECCCHHHHHHHHHHTCCEEECCC---
T ss_pred EEEEecCcc----ccccccCC---------CCEEEEeecCHHHHhhhhhh--eeccCCccHHHHHHHhCCCEEEecCccc
Confidence 999998763 11222333 68999999999999999997 9999999999999999999999999999
Q ss_pred chhhHHHHHHHhcceEEeccCCCCCCCHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHH
Q 042753 385 QYTNAQLLVDQLGVGIRVGEGTRNIPESDELARLLAQSVDGPRRERLKARELSGAALSAVVKGGSSDRDLNDFI 458 (473)
Q Consensus 385 Q~~na~rv~~~~G~G~~l~~~~~~~~~~~~l~~~i~~~l~~~~~~~~~a~~~~~~~~~~~~~~gs~~~~~~~~~ 458 (473)
|+.||+++++ +|+|+.++ ..+.+++ +|+++|+|+ +|+++|+++++.+++ ..+..+.++.++
T Consensus 336 Q~~na~~v~~-~G~g~~l~---~~~~~~~----al~~lL~d~-~~r~~a~~l~~~~~~----~~~~~~~a~~le 396 (400)
T 4amg_A 336 QDTNRDVLTG-LGIGFDAE---AGSLGAE----QCRRLLDDA-GLREAALRVRQEMSE----MPPPAETAAXLV 396 (400)
T ss_dssp CHHHHHHHHH-HTSEEECC---TTTCSHH----HHHHHHHCH-HHHHHHHHHHHHHHT----SCCHHHHHHHHH
T ss_pred HHHHHHHHHH-CCCEEEcC---CCCchHH----HHHHHHcCH-HHHHHHHHHHHHHHc----CCCHHHHHHHHH
Confidence 9999999995 59999999 7777765 667889997 999999999999973 234555555444
|
| >1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-43 Score=351.39 Aligned_cols=383 Identities=16% Similarity=0.141 Sum_probs=250.1
Q ss_pred cEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCCCChhhhhhhccCCCCCCeeEEEcCCCCCCCCCC-hhhHH-HHH
Q 042753 6 AHILVYPFPTSGHIIPLLDLTNRLLTLGLNVTVLITQNNLPLLDSLNANHPSTSLQSLVLPQPKWPAGSP-ATRLL-KFM 83 (473)
Q Consensus 6 ~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~i~~~~~~~~~~~~~f~~l~~~~~~~~~~-~~~~~-~~~ 83 (473)
|||+|++.++.||++|+++||++|++|||+|+|++++.+.+.+... +++|+.++....+.+.. ..... .+.
T Consensus 1 M~Il~~~~~~~GHv~P~l~la~~L~~~Gh~V~~~~~~~~~~~v~~~-------g~~~~~i~~~~~~~~~~~~~~~~~~~~ 73 (415)
T 1iir_A 1 MRVLLATCGSRGDTEPLVALAVRVRDLGADVRMCAPPDCAERLAEV-------GVPHVPVGPSARAPIQRAKPLTAEDVR 73 (415)
T ss_dssp CEEEEECCSCHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHT-------TCCEEECCC-------CCSCCCHHHHH
T ss_pred CeEEEEcCCCchhHHHHHHHHHHHHHCCCeEEEEcCHHHHHHHHHc-------CCeeeeCCCCHHHHhhcccccchHHHH
Confidence 5899999999999999999999999999999999999876666654 68888887542111110 00011 111
Q ss_pred HHHHHHhhHHHHHHHh-cCCCCCcEEEeCC-Ccch--HHHHHHHhCCCcEEEecchHHHHHHHHhhhccCCCCCCCCCCC
Q 042753 84 RVLRELHYPALLDWFK-SHPSPPVAILSDF-FLGW--TQGLAAELGLPRVVFSPSGAFALSVSFAMWTDLPTNDDPDNVD 159 (473)
Q Consensus 84 ~~~~~~~~~~l~~~l~-~~~~~pD~VV~D~-~~~~--~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 159 (473)
..+.......++++++ .. +||+||+|. +..+ +..+|+++|||+|.+++.+.+...
T Consensus 74 ~~~~~~~~~~~~~l~~~~~--~pD~vi~d~~~~~~~~~~~~A~~lgiP~v~~~~~~~~~~~------------------- 132 (415)
T 1iir_A 74 RFTTEAIATQFDEIPAAAE--GCAAVVTTGLLAAAIGVRSVAEKLGIPYFYAFHCPSYVPS------------------- 132 (415)
T ss_dssp HHHHHHHHHHHHHHHHHTT--TCSEEEEESCHHHHHHHHHHHHHHTCCEEEEESSGGGSCC-------------------
T ss_pred HHHHHHHHHHHHHHHHHhc--CCCEEEECChhHhHhhHHHHHHHhCCCEEEEecCCCcCCC-------------------
Confidence 1222122333444443 45 899999998 5567 889999999999999877643100
Q ss_pred ccccCCCCCCCCCCCcc-ccchhhhccCCCCCchHHHHHHhhhcc----------------CCcEEeecchHHhhH-HHH
Q 042753 160 ALVSFPRVPNCPVYPWY-QISHLYRTLKEGDPDWDLHRSNMMANK----------------TSWGIVFNSFAELER-VYI 221 (473)
Q Consensus 160 ~~~~~p~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------~~~~~~~~s~~~le~-~~~ 221 (473)
.++|.....+.+..+ ......... .....++.+.+...... +. ..+.++.+++++ +
T Consensus 133 --~~~p~~~~~~~~~~~~~~n~~~~~~-~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~l~~~~~~l~~~~-- 206 (415)
T 1iir_A 133 --PYYPPPPLGEPSTQDTIDIPAQWER-NNQSAYQRYGGLLNSHRDAIGLPPVEDIFTFGYTD-HPWVAADPVLAPLQ-- 206 (415)
T ss_dssp --SSSCCCC---------CHHHHHHHH-HHHHHHHHHHHHHHHHHHHTTCCCCCCHHHHHHCS-SCEECSCTTTSCCC--
T ss_pred --cccCCccCCccccchHHHHHHHHHH-HHHHHHHHhHHHHHHHHHHcCCCCCCccccccCCC-CEEEeeChhhcCCC--
Confidence 001110000001000 000000000 00000000000000000 11 345555555542 1
Q ss_pred HHHHHhhCCCcEEEeccCCCCCCcchhhccCCCCCCCChhhhHHHhcCCCCCcEEEEEeCCcccCCHHHHHHHHHHHHhC
Q 042753 222 DHMKKEMGHDRVWAVGPVLPPDDDLVESMCRGGSSSVPAHDVLTWLDSRRDESVVYVCFGSRYVLTAKQIHELAAALEKT 301 (473)
Q Consensus 222 ~~~~~~~~~~~~~~vGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~V~vs~Gs~~~~~~~~~~~~~~al~~~ 301 (473)
... .++++|||+.... . +..++++.+|++. ++++|||++||.. ...+.+..+++++++.
T Consensus 207 ---~~~---~~~~~vG~~~~~~-~-----------~~~~~~~~~~l~~--~~~~v~v~~Gs~~-~~~~~~~~~~~al~~~ 265 (415)
T 1iir_A 207 ---PTD---LDAVQTGAWILPD-E-----------RPLSPELAAFLDA--GPPPVYLGFGSLG-APADAVRVAIDAIRAH 265 (415)
T ss_dssp ---CCS---SCCEECCCCCCCC-C-----------CCCCHHHHHHHHT--SSCCEEEECC----CCHHHHHHHHHHHHHT
T ss_pred ---ccc---CCeEeeCCCccCc-c-----------cCCCHHHHHHHhh--CCCeEEEeCCCCC-CcHHHHHHHHHHHHHC
Confidence 000 1789999987764 2 3456789999987 4689999999997 6778888899999999
Q ss_pred CCcEEEEEeCCCccCCcccCCCCchhhHHhhcCCCeEeecCccHHHhhhccCccceeeccCchhHHHHHhhCCeEecCcc
Q 042753 302 DVDFVYCVREPDERHASQDCGVLPDGFEDRVAGRGYVIRGWSQQVAILRHKAVGAFLTHCGWNSVLEGVSAGVVMLTWPM 381 (473)
Q Consensus 302 ~~~~i~~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~v~~~~pq~~lL~~~~v~~~ItHgG~~s~~eal~~GvP~l~~P~ 381 (473)
+.+++|+++... . ....+ ++|+++.+|+||.++|+++++ ||||||+||+.||+++|||+|++|.
T Consensus 266 ~~~~v~~~g~~~----~-~~~~~---------~~~v~~~~~~~~~~~l~~~d~--~v~~~G~~t~~Ea~~~G~P~i~~p~ 329 (415)
T 1iir_A 266 GRRVILSRGWAD----L-VLPDD---------GADCFAIGEVNHQVLFGRVAA--VIHHGGAGTTHVAARAGAPQILLPQ 329 (415)
T ss_dssp TCCEEECTTCTT----C-CCSSC---------GGGEEECSSCCHHHHGGGSSE--EEECCCHHHHHHHHHHTCCEEECCC
T ss_pred CCeEEEEeCCCc----c-cccCC---------CCCEEEeCcCChHHHHhhCCE--EEeCCChhHHHHHHHcCCCEEECCC
Confidence 999999988652 1 01112 258899999999999988886 9999999999999999999999999
Q ss_pred cccchhhHHHHHHHhcceEEeccCCCCCCCHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHH
Q 042753 382 DADQYTNAQLLVDQLGVGIRVGEGTRNIPESDELARLLAQSVDGPRRERLKARELSGAALSAVVKGGSSDRDLNDFIKRI 461 (473)
Q Consensus 382 ~~DQ~~na~rv~~~~G~G~~l~~~~~~~~~~~~l~~~i~~~l~~~~~~~~~a~~~~~~~~~~~~~~gs~~~~~~~~~~~~ 461 (473)
..||+.||++++ ++|+|+.++ ..+++.++|.++|+++ +|+ +|+++++++++.++ ..++.++.++.+. .+
T Consensus 330 ~~dQ~~na~~l~-~~g~g~~~~---~~~~~~~~l~~~i~~l-~~~-~~~~~~~~~~~~~~----~~~~~~~~~~~i~-~~ 398 (415)
T 1iir_A 330 MADQPYYAGRVA-ELGVGVAHD---GPIPTFDSLSAALATA-LTP-ETHARATAVAGTIR----TDGAAVAARLLLD-AV 398 (415)
T ss_dssp STTHHHHHHHHH-HHTSEEECS---SSSCCHHHHHHHHHHH-TSH-HHHHHHHHHHHHSC----SCHHHHHHHHHHH-HH
T ss_pred CCccHHHHHHHH-HCCCcccCC---cCCCCHHHHHHHHHHH-cCH-HHHHHHHHHHHHHh----hcChHHHHHHHHH-HH
Confidence 999999999998 559999998 7789999999999999 886 99999999999874 3444555555444 44
Q ss_pred HhhccCCCc
Q 042753 462 NELKSGKNL 470 (473)
Q Consensus 462 ~~~~~~~~~ 470 (473)
.+..+++++
T Consensus 399 ~~~~~~~~~ 407 (415)
T 1iir_A 399 SREKPTVSA 407 (415)
T ss_dssp HTC------
T ss_pred HhcccHHHH
Confidence 444444443
|
| >1rrv_A Glycosyltransferase GTFD; GT-B, glycosyltransferase, rossmann fold, glycopeptide, VACO antibiotic, transferase-antibiotic complex; HET: OMZ GHP OMY 3FG TYD BGC; 2.00A {Amycolatopsis orientalis} SCOP: c.87.1.5 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-42 Score=345.89 Aligned_cols=381 Identities=15% Similarity=0.086 Sum_probs=254.0
Q ss_pred cEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCCCChhhhhhhccCCCCCCeeEEEcCCCCCCCCC---ChhhHHHH
Q 042753 6 AHILVYPFPTSGHIIPLLDLTNRLLTLGLNVTVLITQNNLPLLDSLNANHPSTSLQSLVLPQPKWPAGS---PATRLLKF 82 (473)
Q Consensus 6 ~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~i~~~~~~~~~~~~~f~~l~~~~~~~~~---~~~~~~~~ 82 (473)
|||++++.++.||++|+++||++|+++||+|+|++++.+.+.+... +++|..++....+... .......+
T Consensus 1 MrIl~~~~~~~GH~~p~l~la~~L~~~Gh~V~~~~~~~~~~~v~~~-------g~~~~~~~~~~~~~~~~~~~~~~~~~~ 73 (416)
T 1rrv_A 1 MRVLLSVCGTRGDVEIGVALADRLKALGVQTRMCAPPAAEERLAEV-------GVPHVPVGLPQHMMLQEGMPPPPPEEE 73 (416)
T ss_dssp CEEEEEEESCHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHH-------TCCEEECSCCGGGCCCTTSCCCCHHHH
T ss_pred CeEEEEecCCCccHHHHHHHHHHHHHCCCeEEEEeCHHHHHHHHHc-------CCeeeecCCCHHHHHhhccccchhHHH
Confidence 5899999999999999999999999999999999999877777665 6888887754111111 01100011
Q ss_pred HHHHHHHhhHHHHHHHh-cCCCCCcEEEeCCC-cch--HHHHHHHhCCCcEEEecchHHHHHHHHhhhccCCCCCCCCCC
Q 042753 83 MRVLRELHYPALLDWFK-SHPSPPVAILSDFF-LGW--TQGLAAELGLPRVVFSPSGAFALSVSFAMWTDLPTNDDPDNV 158 (473)
Q Consensus 83 ~~~~~~~~~~~l~~~l~-~~~~~pD~VV~D~~-~~~--~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~p~~~~~~~~ 158 (473)
...+.......++.+.. .. +||+||+|.+ .++ +..+|+++|||+|.+++.+.+... .
T Consensus 74 ~~~~~~~~~~~~~~l~~~~~--~pD~vi~d~~~~~~~~~~~~A~~~giP~v~~~~~~~~~~~------~----------- 134 (416)
T 1rrv_A 74 QRLAAMTVEMQFDAVPGAAE--GCAAVVAVGDLAAATGVRSVAEKLGLPFFYSVPSPVYLAS------P----------- 134 (416)
T ss_dssp HHHHHHHHHHHHHHHHHHTT--TCSEEEEEECHHHHHHHHHHHHHHTCCEEEEESSGGGSCC------S-----------
T ss_pred HHHHHHHHHHHHHHHHHHhc--CCCEEEEcCchHHHHHHHHHHHHcCCCEEEEeCCCCCCCC------c-----------
Confidence 11111111222222221 45 8999999974 456 789999999999998877543100 0
Q ss_pred CccccCCCCCCCCCCCcc-ccchhhhccCCCCCc----hHHHHHHh------------hhccCCcEEeecchHHhhHHHH
Q 042753 159 DALVSFPRVPNCPVYPWY-QISHLYRTLKEGDPD----WDLHRSNM------------MANKTSWGIVFNSFAELERVYI 221 (473)
Q Consensus 159 ~~~~~~p~l~~~~~~~~~-~~~~~~~~~~~~~~~----~~~~~~~~------------~~~~~~~~~~~~s~~~le~~~~ 221 (473)
..+ |.++ +.+... ......... ..... .+.+.+.. ....+. .++.++.++++++.
T Consensus 135 ~~p---~~~~--~~~~~~r~~n~~~~~~-~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~l~~~~~~l~~~~- 206 (416)
T 1rrv_A 135 HLP---PAYD--EPTTPGVTDIRVLWEE-RAARFADRYGPTLNRRRAEIGLPPVEDVFGYGHGE-RPLLAADPVLAPLQ- 206 (416)
T ss_dssp SSC---CCBC--SCCCTTCCCHHHHHHH-HHHHHHHHHHHHHHHHHHHTTCCCCSCHHHHTTCS-SCEECSCTTTSCCC-
T ss_pred ccC---CCCC--CCCCchHHHHHHHHHH-HHHHHHHHhHHHHHHHHHHcCCCCCCchhhhccCC-CeEEccCccccCCC-
Confidence 000 1100 001000 000000000 00000 00000000 001122 45666666665321
Q ss_pred HHHHHhhCCCcEEEeccCCCCCCcchhhccCCCCCCCChhhhHHHhcCCCCCcEEEEEeCCccc-CCHHHHHHHHHHHHh
Q 042753 222 DHMKKEMGHDRVWAVGPVLPPDDDLVESMCRGGSSSVPAHDVLTWLDSRRDESVVYVCFGSRYV-LTAKQIHELAAALEK 300 (473)
Q Consensus 222 ~~~~~~~~~~~~~~vGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~V~vs~Gs~~~-~~~~~~~~~~~al~~ 300 (473)
. . .++++|||+.... . +..++++.+|++. ++++|||++||... ...+.+..+++++++
T Consensus 207 ----~--~-~~~~~vG~~~~~~-~-----------~~~~~~~~~~l~~--~~~~v~v~~Gs~~~~~~~~~~~~~~~al~~ 265 (416)
T 1rrv_A 207 ----P--D-VDAVQTGAWLLSD-E-----------RPLPPELEAFLAA--GSPPVHIGFGSSSGRGIADAAKVAVEAIRA 265 (416)
T ss_dssp ----S--S-CCCEECCCCCCCC-C-----------CCCCHHHHHHHHS--SSCCEEECCTTCCSHHHHHHHHHHHHHHHH
T ss_pred ----C--C-CCeeeECCCccCc-c-----------CCCCHHHHHHHhc--CCCeEEEecCCCCccChHHHHHHHHHHHHH
Confidence 0 1 2789999988764 2 3456788999987 46899999999864 456778889999999
Q ss_pred CCCcEEEEEeCCCccCCcccCCCCchhhHHhhcCCCeEeecCccHHHhhhccCccceeeccCchhHHHHHhhCCeEecCc
Q 042753 301 TDVDFVYCVREPDERHASQDCGVLPDGFEDRVAGRGYVIRGWSQQVAILRHKAVGAFLTHCGWNSVLEGVSAGVVMLTWP 380 (473)
Q Consensus 301 ~~~~~i~~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~v~~~~pq~~lL~~~~v~~~ItHgG~~s~~eal~~GvP~l~~P 380 (473)
.+.+++|+++... . +...+ ++|+.+.+|+||.++|+++++ ||||||+||+.||+++|||+|++|
T Consensus 266 ~~~~~v~~~g~~~----~-~~~~~---------~~~v~~~~~~~~~~ll~~~d~--~v~~~G~~t~~Ea~~~G~P~i~~p 329 (416)
T 1rrv_A 266 QGRRVILSRGWTE----L-VLPDD---------RDDCFAIDEVNFQALFRRVAA--VIHHGSAGTEHVATRAGVPQLVIP 329 (416)
T ss_dssp TTCCEEEECTTTT----C-CCSCC---------CTTEEEESSCCHHHHGGGSSE--EEECCCHHHHHHHHHHTCCEEECC
T ss_pred CCCeEEEEeCCcc----c-cccCC---------CCCEEEeccCChHHHhccCCE--EEecCChhHHHHHHHcCCCEEEcc
Confidence 9999999988753 0 01112 368899999999999988886 999999999999999999999999
Q ss_pred ccccchhhHHHHHHHhcceEEeccCCCCCCCHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHH
Q 042753 381 MDADQYTNAQLLVDQLGVGIRVGEGTRNIPESDELARLLAQSVDGPRRERLKARELSGAALSAVVKGGSSDRDLNDFIKR 460 (473)
Q Consensus 381 ~~~DQ~~na~rv~~~~G~G~~l~~~~~~~~~~~~l~~~i~~~l~~~~~~~~~a~~~~~~~~~~~~~~gs~~~~~~~~~~~ 460 (473)
.+.||+.||+++++ +|+|+.++ ..+++.++|.++|+++ +|+ +|+++++++++.++ ..++. ++++.++++
T Consensus 330 ~~~dQ~~na~~l~~-~g~g~~~~---~~~~~~~~l~~~i~~l-~~~-~~~~~~~~~~~~~~----~~~~~-~~~~~i~e~ 398 (416)
T 1rrv_A 330 RNTDQPYFAGRVAA-LGIGVAHD---GPTPTFESLSAALTTV-LAP-ETRARAEAVAGMVL----TDGAA-AAADLVLAA 398 (416)
T ss_dssp CSBTHHHHHHHHHH-HTSEEECS---SSCCCHHHHHHHHHHH-TSH-HHHHHHHHHTTTCC----CCHHH-HHHHHHHHH
T ss_pred CCCCcHHHHHHHHH-CCCccCCC---CCCCCHHHHHHHHHHh-hCH-HHHHHHHHHHHHHh----hcCcH-HHHHHHHHH
Confidence 99999999999994 59999998 7789999999999999 986 99999999998884 34455 666665355
Q ss_pred HHhhccCC
Q 042753 461 INELKSGK 468 (473)
Q Consensus 461 ~~~~~~~~ 468 (473)
+.+..+..
T Consensus 399 ~~~~~~~~ 406 (416)
T 1rrv_A 399 VGREKPAV 406 (416)
T ss_dssp HHC-----
T ss_pred HhccCCCC
Confidence 55554433
|
| >3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-41 Score=336.23 Aligned_cols=386 Identities=17% Similarity=0.138 Sum_probs=262.7
Q ss_pred CccEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCCCChhhhhhhccCCCCCCeeEEEcCCCCCCCC--------CC
Q 042753 4 AGAHILVYPFPTSGHIIPLLDLTNRLLTLGLNVTVLITQNNLPLLDSLNANHPSTSLQSLVLPQPKWPAG--------SP 75 (473)
Q Consensus 4 ~~~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~i~~~~~~~~~~~~~f~~l~~~~~~~~--------~~ 75 (473)
.|+||+|++.++.||++|+++||++|+++||+|+|++++.+.+.+... ++.+..++....... .+
T Consensus 19 ~m~rIl~~~~~~~GHv~p~l~La~~L~~~Gh~V~v~~~~~~~~~~~~~-------G~~~~~~~~~~~~~~~~~~~~~~~~ 91 (415)
T 3rsc_A 19 HMAHLLIVNVASHGLILPTLTVVTELVRRGHRVSYVTAGGFAEPVRAA-------GATVVPYQSEIIDADAAEVFGSDDL 91 (415)
T ss_dssp CCCEEEEECCSCHHHHGGGHHHHHHHHHTTCEEEEEECGGGHHHHHHT-------TCEEEECCCSTTTCCHHHHHHSSSS
T ss_pred cCCEEEEEeCCCccccccHHHHHHHHHHCCCEEEEEeCHHHHHHHHhc-------CCEEEeccccccccccchhhccccH
Confidence 389999999999999999999999999999999999998887777765 788888774311100 00
Q ss_pred hhhHHH-HHHHHHHHhhHHHHHHHhcCCCCCcEEEeC-CCcchHHHHHHHhCCCcEEEecchHHHHHHHHhhhccCCCCC
Q 042753 76 ATRLLK-FMRVLRELHYPALLDWFKSHPSPPVAILSD-FFLGWTQGLAAELGLPRVVFSPSGAFALSVSFAMWTDLPTND 153 (473)
Q Consensus 76 ~~~~~~-~~~~~~~~~~~~l~~~l~~~~~~pD~VV~D-~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~p~~~ 153 (473)
...+.. +..... .....+.++++++ +||+||+| ....++..+|+++|||++.+.+....... +.+.
T Consensus 92 ~~~~~~~~~~~~~-~~~~~l~~~l~~~--~PDlVi~d~~~~~~~~~aA~~~giP~v~~~~~~~~~~~-------~~~~-- 159 (415)
T 3rsc_A 92 GVRPHLMYLRENV-SVLRATAEALDGD--VPDLVLYDDFPFIAGQLLAARWRRPAVRLSAAFASNEH-------YSFS-- 159 (415)
T ss_dssp CHHHHHHHHHHHH-HHHHHHHHHHSSS--CCSEEEEESTTHHHHHHHHHHTTCCEEEEESSCCCCSS-------CCHH--
T ss_pred HHHHHHHHHHHHH-HHHHHHHHHHhcc--CCCEEEECchhhhHHHHHHHHhCCCEEEEEecccccCc-------cccc--
Confidence 111222 333333 4456788889999 99999999 77778889999999999998744321000 0000
Q ss_pred CCCCCCccccCCCCCCCCCCCccccchhhhccCCCCCchHHHHHHhhhccCCcEEeecchHHhhHHHHHHHHHhhCCCcE
Q 042753 154 DPDNVDALVSFPRVPNCPVYPWYQISHLYRTLKEGDPDWDLHRSNMMANKTSWGIVFNSFAELERVYIDHMKKEMGHDRV 233 (473)
Q Consensus 154 ~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~le~~~~~~~~~~~~~~~~ 233 (473)
....+...+..+.........+..+........... ... .......+......++ .....++ .++
T Consensus 160 ---~~~~~~~~~~~p~~~~~~~~~~~~~~~~~g~~~~~~----~~~--~~~~~~~l~~~~~~~~-----~~~~~~~-~~~ 224 (415)
T 3rsc_A 160 ---QDMVTLAGTIDPLDLPVFRDTLRDLLAEHGLSRSVV----DCW--NHVEQLNLVFVPKAFQ-----IAGDTFD-DRF 224 (415)
T ss_dssp ---HHHHHHHTCCCGGGCHHHHHHHHHHHHHTTCCCCHH----HHH--TCCCSEEEESSCTTTS-----TTGGGCC-TTE
T ss_pred ---cccccccccCChhhHHHHHHHHHHHHHHcCCCCChh----hhh--cCCCCeEEEEcCcccC-----CCcccCC-Cce
Confidence 000000000000000000000000010000000000 000 0001222322222222 2233456 689
Q ss_pred EEeccCCCCCCcchhhccCCCCCCCChhhhHHHhcCCCCCcEEEEEeCCcccCCHHHHHHHHHHHHhCCCcEEEEEeCCC
Q 042753 234 WAVGPVLPPDDDLVESMCRGGSSSVPAHDVLTWLDSRRDESVVYVCFGSRYVLTAKQIHELAAALEKTDVDFVYCVREPD 313 (473)
Q Consensus 234 ~~vGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~V~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~ 313 (473)
.++||+.... . ...+|.....++++|||++||......+.+..+++++++.+.+++|.++.+.
T Consensus 225 ~~vGp~~~~~-~----------------~~~~~~~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~al~~~~~~~v~~~g~~~ 287 (415)
T 3rsc_A 225 VFVGPCFDDR-R----------------FLGEWTRPADDLPVVLVSLGTTFNDRPGFFRDCARAFDGQPWHVVMTLGGQV 287 (415)
T ss_dssp EECCCCCCCC-G----------------GGCCCCCCSSCCCEEEEECTTTSCCCHHHHHHHHHHHTTSSCEEEEECTTTS
T ss_pred EEeCCCCCCc-c----------------cCcCccccCCCCCEEEEECCCCCCChHHHHHHHHHHHhcCCcEEEEEeCCCC
Confidence 9999987654 2 1122444345789999999999877778899999999998899999988642
Q ss_pred ccCCcccCCCCchhhHHhhcCCCeEeecCccHHHhhhccCccceeeccCchhHHHHHhhCCeEecCcccccchhhHHHHH
Q 042753 314 ERHASQDCGVLPDGFEDRVAGRGYVIRGWSQQVAILRHKAVGAFLTHCGWNSVLEGVSAGVVMLTWPMDADQYTNAQLLV 393 (473)
Q Consensus 314 ~~~~~~~~~~lp~~~~~~~~~~nv~v~~~~pq~~lL~~~~v~~~ItHgG~~s~~eal~~GvP~l~~P~~~DQ~~na~rv~ 393 (473)
. .+.... .++|+++.+|+|+.++|+++++ +|||||+||+.||+++|+|+|++|...||+.||++++
T Consensus 288 -~--~~~l~~---------~~~~v~~~~~~~~~~ll~~ad~--~v~~~G~~t~~Ea~~~G~P~v~~p~~~~q~~~a~~l~ 353 (415)
T 3rsc_A 288 -D--PAALGD---------LPPNVEAHRWVPHVKVLEQATV--CVTHGGMGTLMEALYWGRPLVVVPQSFDVQPMARRVD 353 (415)
T ss_dssp -C--GGGGCC---------CCTTEEEESCCCHHHHHHHEEE--EEESCCHHHHHHHHHTTCCEEECCCSGGGHHHHHHHH
T ss_pred -C--hHHhcC---------CCCcEEEEecCCHHHHHhhCCE--EEECCcHHHHHHHHHhCCCEEEeCCcchHHHHHHHHH
Confidence 0 001111 2368999999999999999997 9999999999999999999999999999999999999
Q ss_pred HHhcceEEeccCCCCCCCHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHh
Q 042753 394 DQLGVGIRVGEGTRNIPESDELARLLAQSVDGPRRERLKARELSGAALSAVVKGGSSDRDLNDFIKRINE 463 (473)
Q Consensus 394 ~~~G~G~~l~~~~~~~~~~~~l~~~i~~~l~~~~~~~~~a~~~~~~~~~~~~~~gs~~~~~~~~~~~~~~ 463 (473)
+. |+|+.+. .++++.++|.++|+++++|+ +++++++++++.+. .+++.+++++.+.+.+.+
T Consensus 354 ~~-g~g~~~~---~~~~~~~~l~~~i~~ll~~~-~~~~~~~~~~~~~~----~~~~~~~~~~~i~~~~~~ 414 (415)
T 3rsc_A 354 QL-GLGAVLP---GEKADGDTLLAAVGAVAADP-ALLARVEAMRGHVR----RAGGAARAADAVEAYLAR 414 (415)
T ss_dssp HH-TCEEECC---GGGCCHHHHHHHHHHHHTCH-HHHHHHHHHHHHHH----HSCHHHHHHHHHHHHHHH
T ss_pred Hc-CCEEEcc---cCCCCHHHHHHHHHHHHcCH-HHHHHHHHHHHHHH----hcCHHHHHHHHHHHHhhc
Confidence 55 9999998 77889999999999999997 99999999999985 456788888888776653
|
| >3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.9e-40 Score=327.03 Aligned_cols=385 Identities=18% Similarity=0.171 Sum_probs=260.3
Q ss_pred CccEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCCCChhhhhhhccCCCCCCeeEEEcCCCC--CCCC---CCh--
Q 042753 4 AGAHILVYPFPTSGHIIPLLDLTNRLLTLGLNVTVLITQNNLPLLDSLNANHPSTSLQSLVLPQPK--WPAG---SPA-- 76 (473)
Q Consensus 4 ~~~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~i~~~~~~~~~~~~~f~~l~~~~--~~~~---~~~-- 76 (473)
.|+||+|++.++.||++|+++||++|+++||+|+|++++.+.+.+... ++++..++... .... ...
T Consensus 3 ~M~~il~~~~~~~Ghv~~~~~La~~L~~~GheV~v~~~~~~~~~~~~~-------G~~~~~~~~~~~~~~~~~~~~~~~~ 75 (402)
T 3ia7_A 3 RQRHILFANVQGHGHVYPSLGLVSELARRGHRITYVTTPLFADEVKAA-------GAEVVLYKSEFDTFHVPEVVKQEDA 75 (402)
T ss_dssp CCCEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEECHHHHHHHHHT-------TCEEEECCCGGGTSSSSSSSCCTTH
T ss_pred CCCEEEEEeCCCCcccccHHHHHHHHHhCCCEEEEEcCHHHHHHHHHc-------CCEEEecccccccccccccccccch
Confidence 378999999999999999999999999999999999998777777655 68888876421 1110 011
Q ss_pred -hhHHH-HHHHHHHHhhHHHHHHHhcCCCCCcEEEeC-CCcchHHHHHHHhCCCcEEEecchHHHHHHHHhhhccCCCCC
Q 042753 77 -TRLLK-FMRVLRELHYPALLDWFKSHPSPPVAILSD-FFLGWTQGLAAELGLPRVVFSPSGAFALSVSFAMWTDLPTND 153 (473)
Q Consensus 77 -~~~~~-~~~~~~~~~~~~l~~~l~~~~~~pD~VV~D-~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~p~~~ 153 (473)
..+.. +..... .....+.+++++. +||+||+| ....++..+|+++|||+|.+.+........... ..
T Consensus 76 ~~~~~~~~~~~~~-~~~~~l~~~l~~~--~pD~Vi~d~~~~~~~~~aA~~~giP~v~~~~~~~~~~~~~~~-~~------ 145 (402)
T 3ia7_A 76 ETQLHLVYVRENV-AILRAAEEALGDN--PPDLVVYDVFPFIAGRLLAARWDRPAVRLTGGFAANEHYSLF-KE------ 145 (402)
T ss_dssp HHHHHHHHHHHHH-HHHHHHHHHHTTC--CCSEEEEESTTHHHHHHHHHHHTCCEEEEESSCCCBTTBCHH-HH------
T ss_pred HHHHHHHHHHHHH-HHHHHHHHHHhcc--CCCEEEECchHHHHHHHHHHhhCCCEEEEecccccCcccccc-cc------
Confidence 12222 223333 4456788889999 99999999 777788899999999999986443210000000 00
Q ss_pred CCCCCCccccCCCCCC-CCCCCccccchhhhccCCCCCchHHHHHHhhhccCCcEEeecchHHhhHHHHHHHHHhhCCCc
Q 042753 154 DPDNVDALVSFPRVPN-CPVYPWYQISHLYRTLKEGDPDWDLHRSNMMANKTSWGIVFNSFAELERVYIDHMKKEMGHDR 232 (473)
Q Consensus 154 ~~~~~~~~~~~p~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~le~~~~~~~~~~~~~~~ 232 (473)
. ......... ........+..+........ .. ...... .....+...-.+++ .....++ .+
T Consensus 146 -----~-~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~---~~~~~~--~~~~~l~~~~~~~~-----~~~~~~~-~~ 207 (402)
T 3ia7_A 146 -----L-WKSNGQRHPADVEAVHSVLVDLLGKYGVDT-PV---KEYWDE--IEGLTIVFLPKSFQ-----PFAETFD-ER 207 (402)
T ss_dssp -----H-HHHHTCCCGGGSHHHHHHHHHHHHTTTCCS-CH---HHHHTC--CCSCEEESSCGGGS-----TTGGGCC-TT
T ss_pred -----c-cccccccChhhHHHHHHHHHHHHHHcCCCC-Ch---hhhhcC--CCCeEEEEcChHhC-----CccccCC-CC
Confidence 0 000000000 00000000000111000000 00 000000 00222222222222 2223456 68
Q ss_pred EEEeccCCCCCCcchhhccCCCCCCCChhhhHHHhcCCCCCcEEEEEeCCcccCCHHHHHHHHHHHHhCCCcEEEEEeCC
Q 042753 233 VWAVGPVLPPDDDLVESMCRGGSSSVPAHDVLTWLDSRRDESVVYVCFGSRYVLTAKQIHELAAALEKTDVDFVYCVREP 312 (473)
Q Consensus 233 ~~~vGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~V~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~ 312 (473)
+.++||+.... . ...+|.....++++|||++||......+.+..+++++++.+.+++|.++.+
T Consensus 208 ~~~vGp~~~~~-~----------------~~~~~~~~~~~~~~v~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 270 (402)
T 3ia7_A 208 FAFVGPTLTGR-D----------------GQPGWQPPRPDAPVLLVSLGNQFNEHPEFFRACAQAFADTPWHVVMAIGGF 270 (402)
T ss_dssp EEECCCCCCC---------------------CCCCCSSTTCCEEEEECCSCSSCCHHHHHHHHHHHTTSSCEEEEECCTT
T ss_pred eEEeCCCCCCc-c----------------cCCCCcccCCCCCEEEEECCCCCcchHHHHHHHHHHHhcCCcEEEEEeCCc
Confidence 99999987654 2 111244334578999999999987777889999999998889999988864
Q ss_pred CccCCcccCCCCchhhHHhhcCCCeEeecCccHHHhhhccCccceeeccCchhHHHHHhhCCeEecCcc-cccchhhHHH
Q 042753 313 DERHASQDCGVLPDGFEDRVAGRGYVIRGWSQQVAILRHKAVGAFLTHCGWNSVLEGVSAGVVMLTWPM-DADQYTNAQL 391 (473)
Q Consensus 313 ~~~~~~~~~~~lp~~~~~~~~~~nv~v~~~~pq~~lL~~~~v~~~ItHgG~~s~~eal~~GvP~l~~P~-~~DQ~~na~r 391 (473)
. . .+.+.. .++|+.+.+|+|+.++|+++++ +|||||+||+.||+++|+|+|++|. ..||+.|+.+
T Consensus 271 ~----~--~~~~~~------~~~~v~~~~~~~~~~ll~~ad~--~v~~~G~~t~~Ea~~~G~P~v~~p~~~~~q~~~a~~ 336 (402)
T 3ia7_A 271 L----D--PAVLGP------LPPNVEAHQWIPFHSVLAHARA--CLTHGTTGAVLEAFAAGVPLVLVPHFATEAAPSAER 336 (402)
T ss_dssp S----C--GGGGCS------CCTTEEEESCCCHHHHHTTEEE--EEECCCHHHHHHHHHTTCCEEECGGGCGGGHHHHHH
T ss_pred C----C--hhhhCC------CCCcEEEecCCCHHHHHhhCCE--EEECCCHHHHHHHHHhCCCEEEeCCCcccHHHHHHH
Confidence 2 0 011111 2468999999999999999997 9999999999999999999999999 9999999999
Q ss_pred HHHHhcceEEeccCCCCCCCHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHh
Q 042753 392 LVDQLGVGIRVGEGTRNIPESDELARLLAQSVDGPRRERLKARELSGAALSAVVKGGSSDRDLNDFIKRINE 463 (473)
Q Consensus 392 v~~~~G~G~~l~~~~~~~~~~~~l~~~i~~~l~~~~~~~~~a~~~~~~~~~~~~~~gs~~~~~~~~~~~~~~ 463 (473)
+++. |+|+.+. .++++.+.|.++|+++++|+ +++++++++++.+. .+++.+++++.+.+.+.+
T Consensus 337 ~~~~-g~g~~~~---~~~~~~~~l~~~~~~ll~~~-~~~~~~~~~~~~~~----~~~~~~~~~~~i~~~~~~ 399 (402)
T 3ia7_A 337 VIEL-GLGSVLR---PDQLEPASIREAVERLAADS-AVRERVRRMQRDIL----SSGGPARAADEVEAYLGR 399 (402)
T ss_dssp HHHT-TSEEECC---GGGCSHHHHHHHHHHHHHCH-HHHHHHHHHHHHHH----TSCHHHHHHHHHHHHHHH
T ss_pred HHHc-CCEEEcc---CCCCCHHHHHHHHHHHHcCH-HHHHHHHHHHHHHh----hCChHHHHHHHHHHHHhh
Confidence 9955 9999998 77889999999999999997 99999999999884 456788888888877754
|
| >2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-38 Score=319.59 Aligned_cols=372 Identities=15% Similarity=0.079 Sum_probs=243.4
Q ss_pred CccEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCCCChhhhhhhccCCCCCCeeEEEcCCCCC-CC----------
Q 042753 4 AGAHILVYPFPTSGHIIPLLDLTNRLLTLGLNVTVLITQNNLPLLDSLNANHPSTSLQSLVLPQPKW-PA---------- 72 (473)
Q Consensus 4 ~~~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~i~~~~~~~~~~~~~f~~l~~~~~-~~---------- 72 (473)
.|+||+|++.++.||++|+++||++|+++||+|+|++++.+.+.+... +++|..++.... .+
T Consensus 19 ~~mrIl~~~~~~~GHv~p~l~la~~L~~~GheV~~~~~~~~~~~v~~~-------G~~~~~i~~~~~~~~~~~~~~~~~~ 91 (441)
T 2yjn_A 19 SHMRVVFSSMASKSHLFGLVPLAWAFRAAGHEVRVVASPALTEDITAA-------GLTAVPVGTDVDLVDFMTHAGHDII 91 (441)
T ss_dssp CCCEEEEECCSCHHHHTTTHHHHHHHHHTTCEEEEEECGGGHHHHHTT-------TCCEEECSCCCCHHHHHHHTTHHHH
T ss_pred CccEEEEEcCCCcchHhHHHHHHHHHHHCCCeEEEEeCchhHHHHHhC-------CCceeecCCccchHHHhhhhhcccc
Confidence 589999999999999999999999999999999999998876666654 788888874310 00
Q ss_pred -----CC-----Ch-hhHH---HHHHHHHH--------H-hhHHHHHHHhcCCCCCcEEEeCCCcchHHHHHHHhCCCcE
Q 042753 73 -----GS-----PA-TRLL---KFMRVLRE--------L-HYPALLDWFKSHPSPPVAILSDFFLGWTQGLAAELGLPRV 129 (473)
Q Consensus 73 -----~~-----~~-~~~~---~~~~~~~~--------~-~~~~l~~~l~~~~~~pD~VV~D~~~~~~~~~A~~~giP~v 129 (473)
.. +. ..+. .....+.. . ....+.++++++ +||+||+|....++..+|+.+|||+|
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~pDlVv~d~~~~~~~~aA~~lgiP~v 169 (441)
T 2yjn_A 92 DYVRSLDFSERDPATLTWEHLLGMQTVLTPTFYALMSPDTLIEGMVSFCRKW--RPDLVIWEPLTFAAPIAAAVTGTPHA 169 (441)
T ss_dssp HHHTTCCCTTCCGGGGSHHHHHHHHHHHHHHTTTTSSCHHHHHHHHHHHHHH--CCSEEEECTTCTHHHHHHHHHTCCEE
T ss_pred cccccccccccCcchhhhhhhhhHHHHHHHHHHhhcchHHHHHHHHHHHHhc--CCCEEEecCcchhHHHHHHHcCCCEE
Confidence 00 10 0111 11111111 1 345566677788 99999999987788999999999999
Q ss_pred EEecchHHHHHHHHhhhccCCCCCCCCCCCccccCCCCCCCCCCCccccchhhhccCCCCCchHHHHHHhhhcc------
Q 042753 130 VFSPSGAFALSVSFAMWTDLPTNDDPDNVDALVSFPRVPNCPVYPWYQISHLYRTLKEGDPDWDLHRSNMMANK------ 203 (473)
Q Consensus 130 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------ 203 (473)
.+...+............. +...|... . .. ...+.+.+......
T Consensus 170 ~~~~~~~~~~~~~~~~~~~------------~~~~~~~~----~-~~-------------~~~~~l~~~~~~~g~~~~~~ 219 (441)
T 2yjn_A 170 RLLWGPDITTRARQNFLGL------------LPDQPEEH----R-ED-------------PLAEWLTWTLEKYGGPAFDE 219 (441)
T ss_dssp EECSSCCHHHHHHHHHHHH------------GGGSCTTT----C-CC-------------HHHHHHHHHHHHTTCCCCCG
T ss_pred EEecCCCcchhhhhhhhhh------------cccccccc----c-cc-------------hHHHHHHHHHHHcCCCCCCc
Confidence 9865432211110000000 00000000 0 00 01111111111110
Q ss_pred ---CCcEEeecchHHhhHHHHHHHHHhhCCCcEEEeccCCCCCCcchhhccCCCCCCCChhhhHHHhcCCCCCcEEEEEe
Q 042753 204 ---TSWGIVFNSFAELERVYIDHMKKEMGHDRVWAVGPVLPPDDDLVESMCRGGSSSVPAHDVLTWLDSRRDESVVYVCF 280 (473)
Q Consensus 204 ---~~~~~~~~s~~~le~~~~~~~~~~~~~~~~~~vGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~V~vs~ 280 (473)
.....+..+.+.++.+ ..++ . ..+++.... .+.++.+|++..+++++|||++
T Consensus 220 ~~~~~~~~l~~~~~~~~~~------~~~~--~-~~~~~~~~~----------------~~~~~~~~l~~~~~~~~v~v~~ 274 (441)
T 2yjn_A 220 EVVVGQWTIDPAPAAIRLD------TGLK--T-VGMRYVDYN----------------GPSVVPEWLHDEPERRRVCLTL 274 (441)
T ss_dssp GGTSCSSEEECSCGGGSCC------CCCC--E-EECCCCCCC----------------SSCCCCGGGSSCCSSCEEEEEC
T ss_pred cccCCCeEEEecCccccCC------CCCC--C-CceeeeCCC----------------CCcccchHhhcCCCCCEEEEEC
Confidence 0111122221112110 0111 0 122222111 1234557887656789999999
Q ss_pred CCcccC---CHHHHHHHHHHHHhCCCcEEEEEeCCCccCCcccCCCCchhhHHhhcCCCeEeecCccHHHhhhccCccce
Q 042753 281 GSRYVL---TAKQIHELAAALEKTDVDFVYCVREPDERHASQDCGVLPDGFEDRVAGRGYVIRGWSQQVAILRHKAVGAF 357 (473)
Q Consensus 281 Gs~~~~---~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~v~~~~pq~~lL~~~~v~~~ 357 (473)
||.... ..+.+..+++++++.+.+++|+++... . +.+.. .++|+.+.+|+||.++|+++++ |
T Consensus 275 Gs~~~~~~~~~~~~~~~~~al~~~~~~~v~~~g~~~----~---~~l~~------~~~~v~~~~~~~~~~ll~~ad~--~ 339 (441)
T 2yjn_A 275 GISSRENSIGQVSIEELLGAVGDVDAEIIATFDAQQ----L---EGVAN------IPDNVRTVGFVPMHALLPTCAA--T 339 (441)
T ss_dssp ----------CCSTTTTHHHHHTSSSEEEECCCTTT----T---SSCSS------CCSSEEECCSCCHHHHGGGCSE--E
T ss_pred CCCcccccChHHHHHHHHHHHHcCCCEEEEEECCcc----h---hhhcc------CCCCEEEecCCCHHHHHhhCCE--E
Confidence 998753 345677789999989999999988642 1 11211 2368999999999999999987 9
Q ss_pred eeccCchhHHHHHhhCCeEecCcccccchhhHHHHHHHhcceEEeccCCCCCCCHHHHHHHHHHHhCCcHHHHHHHHHHH
Q 042753 358 LTHCGWNSVLEGVSAGVVMLTWPMDADQYTNAQLLVDQLGVGIRVGEGTRNIPESDELARLLAQSVDGPRRERLKARELS 437 (473)
Q Consensus 358 ItHgG~~s~~eal~~GvP~l~~P~~~DQ~~na~rv~~~~G~G~~l~~~~~~~~~~~~l~~~i~~~l~~~~~~~~~a~~~~ 437 (473)
|||||+||+.||+++|||+|++|...||+.||+++++. |+|+.+. ..+++.++|.++|+++++|+ ++++++++++
T Consensus 340 V~~~G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~~-g~g~~~~---~~~~~~~~l~~~i~~ll~~~-~~~~~~~~~~ 414 (441)
T 2yjn_A 340 VHHGGPGSWHTAAIHGVPQVILPDGWDTGVRAQRTQEF-GAGIALP---VPELTPDQLRESVKRVLDDP-AHRAGAARMR 414 (441)
T ss_dssp EECCCHHHHHHHHHTTCCEEECCCSHHHHHHHHHHHHH-TSEEECC---TTTCCHHHHHHHHHHHHHCH-HHHHHHHHHH
T ss_pred EECCCHHHHHHHHHhCCCEEEeCCcccHHHHHHHHHHc-CCEEEcc---cccCCHHHHHHHHHHHhcCH-HHHHHHHHHH
Confidence 99999999999999999999999999999999999955 9999998 77899999999999999997 9999999999
Q ss_pred HHHHHHHhcCCChHHHHHHHHHHHHh
Q 042753 438 GAALSAVVKGGSSDRDLNDFIKRINE 463 (473)
Q Consensus 438 ~~~~~~~~~~gs~~~~~~~~~~~~~~ 463 (473)
+.+. ..++.++.++.+.+.+.+
T Consensus 415 ~~~~----~~~~~~~~~~~i~~~~~~ 436 (441)
T 2yjn_A 415 DDML----AEPSPAEVVGICEELAAG 436 (441)
T ss_dssp HHHH----TSCCHHHHHHHHHHHHHC
T ss_pred HHHH----cCCCHHHHHHHHHHHHHh
Confidence 9985 456677777777776654
|
| >2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.3e-38 Score=312.85 Aligned_cols=383 Identities=19% Similarity=0.216 Sum_probs=253.1
Q ss_pred ccEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCCCChhhhhhhccCCCCCCeeEEEcCCCCCCCCC------Ch--
Q 042753 5 GAHILVYPFPTSGHIIPLLDLTNRLLTLGLNVTVLITQNNLPLLDSLNANHPSTSLQSLVLPQPKWPAGS------PA-- 76 (473)
Q Consensus 5 ~~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~i~~~~~~~~~~~~~f~~l~~~~~~~~~------~~-- 76 (473)
|+||++++.++.||++|+++|+++|.++||+|++++++.+.+.+... ++++..++........ ..
T Consensus 7 m~kIl~~~~~~~Gh~~p~~~la~~L~~~G~~V~~~~~~~~~~~~~~~-------g~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (430)
T 2iyf_A 7 PAHIAMFSIAAHGHVNPSLEVIRELVARGHRVTYAIPPVFADKVAAT-------GPRPVLYHSTLPGPDADPEAWGSTLL 79 (430)
T ss_dssp -CEEEEECCSCHHHHGGGHHHHHHHHHTTCEEEEEECGGGHHHHHTT-------SCEEEECCCCSCCTTSCGGGGCSSHH
T ss_pred cceEEEEeCCCCccccchHHHHHHHHHCCCeEEEEeCHHHHHHHHhC-------CCEEEEcCCcCccccccccccchhhH
Confidence 57999999999999999999999999999999999998776655544 6888877643111111 01
Q ss_pred hhHHHHHHHHHHHhhHHHHHHHhcCCCCCcEEEeCCCcchHHHHHHHhCCCcEEEecchHHHHHHHHhhhccCCCCCCCC
Q 042753 77 TRLLKFMRVLRELHYPALLDWFKSHPSPPVAILSDFFLGWTQGLAAELGLPRVVFSPSGAFALSVSFAMWTDLPTNDDPD 156 (473)
Q Consensus 77 ~~~~~~~~~~~~~~~~~l~~~l~~~~~~pD~VV~D~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~p~~~~~~ 156 (473)
..+..+...+. .....+.+++++. +||+||+|...+++..+|+++|||+|.+++.............. +. .
T Consensus 80 ~~~~~~~~~~~-~~~~~l~~~l~~~--~pD~Vi~d~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~--~~----~ 150 (430)
T 2iyf_A 80 DNVEPFLNDAI-QALPQLADAYADD--IPDLVLHDITSYPARVLARRWGVPAVSLSPNLVAWKGYEEEVAE--PM----W 150 (430)
T ss_dssp HHHHHHHHHHH-HHHHHHHHHHTTS--CCSEEEEETTCHHHHHHHHHHTCCEEEEESSCCCCTTHHHHTHH--HH----H
T ss_pred HHHHHHHHHHH-HHHHHHHHHhhcc--CCCEEEECCccHHHHHHHHHcCCCEEEEeccccccccccccccc--ch----h
Confidence 11111222222 4456788888888 99999999887788999999999999987654210000000000 00 0
Q ss_pred CCCccccCCCCCCCCCCCccccchhhhccCCCCCchHHHHHHhhhccCCcEEeecchHHhhHHHHHHHHHhhCCCc-EEE
Q 042753 157 NVDALVSFPRVPNCPVYPWYQISHLYRTLKEGDPDWDLHRSNMMANKTSWGIVFNSFAELERVYIDHMKKEMGHDR-VWA 235 (473)
Q Consensus 157 ~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~le~~~~~~~~~~~~~~~-~~~ 235 (473)
......+++. .....+..++......... . ........++.++..+++... ..++ ++ +++
T Consensus 151 --~~~~~~~~~~----~~~~~~~~~~~~~g~~~~~----~---~~~~~~~~~l~~~~~~~~~~~-----~~~~-~~~v~~ 211 (430)
T 2iyf_A 151 --REPRQTERGR----AYYARFEAWLKENGITEHP----D---TFASHPPRSLVLIPKALQPHA-----DRVD-EDVYTF 211 (430)
T ss_dssp --HHHHHSHHHH----HHHHHHHHHHHHTTCCSCH----H---HHHHCCSSEEECSCGGGSTTG-----GGSC-TTTEEE
T ss_pred --hhhccchHHH----HHHHHHHHHHHHhCCCCCH----H---HHhcCCCcEEEeCcHHhCCCc-----ccCC-CccEEE
Confidence 0000000000 0000000000000000000 0 011124556677766665421 2355 67 999
Q ss_pred eccCCCCCCcchhhccCCCCCCCChhhhHHHhcCCCCCcEEEEEeCCcccCCHHHHHHHHHHHHhC-CCcEEEEEeCCCc
Q 042753 236 VGPVLPPDDDLVESMCRGGSSSVPAHDVLTWLDSRRDESVVYVCFGSRYVLTAKQIHELAAALEKT-DVDFVYCVREPDE 314 (473)
Q Consensus 236 vGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~V~vs~Gs~~~~~~~~~~~~~~al~~~-~~~~i~~~~~~~~ 314 (473)
+||.+... . . ..+|.+...++++|||++||......+.+..+++++++. +.+++|.++...
T Consensus 212 vG~~~~~~-~-----------~-----~~~~~~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~~l~~~~~~~~~~~~G~~~- 273 (430)
T 2iyf_A 212 VGACQGDR-A-----------E-----EGGWQRPAGAEKVVLVSLGSAFTKQPAFYRECVRAFGNLPGWHLVLQIGRKV- 273 (430)
T ss_dssp CCCCC----------------------CCCCCCCTTCSEEEEEECTTTCC-CHHHHHHHHHHHTTCTTEEEEEECC----
T ss_pred eCCcCCCC-C-----------C-----CCCCccccCCCCeEEEEcCCCCCCcHHHHHHHHHHHhcCCCeEEEEEeCCCC-
Confidence 99865433 1 0 012444334678999999999855678888899999885 888989887642
Q ss_pred cCCcccCCCCchhhHHhhcCCCeEeecCccHHHhhhccCccceeeccCchhHHHHHhhCCeEecCcccccchhhHHHHHH
Q 042753 315 RHASQDCGVLPDGFEDRVAGRGYVIRGWSQQVAILRHKAVGAFLTHCGWNSVLEGVSAGVVMLTWPMDADQYTNAQLLVD 394 (473)
Q Consensus 315 ~~~~~~~~~lp~~~~~~~~~~nv~v~~~~pq~~lL~~~~v~~~ItHgG~~s~~eal~~GvP~l~~P~~~DQ~~na~rv~~ 394 (473)
. .+.+. + .++|+.+.+|+||.++|+++++ ||||||+||++||+++|+|+|++|...||..|++++++
T Consensus 274 ---~------~~~l~-~-~~~~v~~~~~~~~~~~l~~ad~--~v~~~G~~t~~Ea~~~G~P~i~~p~~~~q~~~a~~~~~ 340 (430)
T 2iyf_A 274 ---T------PAELG-E-LPDNVEVHDWVPQLAILRQADL--FVTHAGAGGSQEGLATATPMIAVPQAVDQFGNADMLQG 340 (430)
T ss_dssp ---C------GGGGC-S-CCTTEEEESSCCHHHHHTTCSE--EEECCCHHHHHHHHHTTCCEEECCCSHHHHHHHHHHHH
T ss_pred ---C------hHHhc-c-CCCCeEEEecCCHHHHhhccCE--EEECCCccHHHHHHHhCCCEEECCCccchHHHHHHHHH
Confidence 0 01111 0 2368999999999999999997 99999999999999999999999999999999999995
Q ss_pred HhcceEEeccCCCCCCCHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHH
Q 042753 395 QLGVGIRVGEGTRNIPESDELARLLAQSVDGPRRERLKARELSGAALSAVVKGGSSDRDLNDFIKRIN 462 (473)
Q Consensus 395 ~~G~G~~l~~~~~~~~~~~~l~~~i~~~l~~~~~~~~~a~~~~~~~~~~~~~~gs~~~~~~~~~~~~~ 462 (473)
.|+|+.+. .++++.++|.++|+++++|+ ++++++++.++.+.+ .++.++.++.+++.+.
T Consensus 341 -~g~g~~~~---~~~~~~~~l~~~i~~ll~~~-~~~~~~~~~~~~~~~----~~~~~~~~~~i~~~~~ 399 (430)
T 2iyf_A 341 -LGVARKLA---TEEATADLLRETALALVDDP-EVARRLRRIQAEMAQ----EGGTRRAADLIEAELP 399 (430)
T ss_dssp -TTSEEECC---CC-CCHHHHHHHHHHHHHCH-HHHHHHHHHHHHHHH----HCHHHHHHHHHHTTSC
T ss_pred -cCCEEEcC---CCCCCHHHHHHHHHHHHcCH-HHHHHHHHHHHHHHh----cCcHHHHHHHHHHHhh
Confidence 59999998 77889999999999999997 999999999988863 2456777776665543
|
| >2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis; 1.88A {Streptomyces fradiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.9e-37 Score=302.39 Aligned_cols=358 Identities=15% Similarity=0.130 Sum_probs=248.6
Q ss_pred cEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCCCChhhhhhhccCCCCCCeeEEEcCCCCC-C-------CCC---
Q 042753 6 AHILVYPFPTSGHIIPLLDLTNRLLTLGLNVTVLITQNNLPLLDSLNANHPSTSLQSLVLPQPKW-P-------AGS--- 74 (473)
Q Consensus 6 ~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~i~~~~~~~~~~~~~f~~l~~~~~-~-------~~~--- 74 (473)
|||++++.++.||++|+++|+++|.++||+|++++++.+.+.+... ++.+..++.... . ..+
T Consensus 1 MrIl~~~~~~~Gh~~p~~~la~~L~~~Gh~V~~~~~~~~~~~~~~~-------g~~~~~~~~~~~~~~~~~~~~~~~~~~ 73 (384)
T 2p6p_A 1 MRILFVAAGSPATVFALAPLATAARNAGHQVVMAANQDMGPVVTGV-------GLPAVATTDLPIRHFITTDREGRPEAI 73 (384)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHT-------TCCEEESCSSCHHHHHHBCTTSCBCCC
T ss_pred CEEEEEeCCccchHhHHHHHHHHHHHCCCEEEEEeCHHHHHHHHhC-------CCEEEEeCCcchHHHHhhhcccCcccc
Confidence 5899999999999999999999999999999999998766555544 677887764210 0 010
Q ss_pred -Ch-hhHHHH----HHHHHHHhhHHHHHHHhcCCCCCcEEEeCCCcchHHHHHHHhCCCcEEEecchHHHHHHHHhhhcc
Q 042753 75 -PA-TRLLKF----MRVLRELHYPALLDWFKSHPSPPVAILSDFFLGWTQGLAAELGLPRVVFSPSGAFALSVSFAMWTD 148 (473)
Q Consensus 75 -~~-~~~~~~----~~~~~~~~~~~l~~~l~~~~~~pD~VV~D~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~ 148 (473)
+. .....+ ...........+.+++++. +||+||+|....++..+|+.+|||+|.+...+..
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~--~pD~Vi~~~~~~~~~~~a~~~giP~v~~~~~~~~----------- 140 (384)
T 2p6p_A 74 PSDPVAQARFTGRWFARMAASSLPRMLDFSRAW--RPDLIVGGTMSYVAPLLALHLGVPHARQTWDAVD----------- 140 (384)
T ss_dssp CCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--CCSEEEEETTCTHHHHHHHHHTCCEEEECCSSCC-----------
T ss_pred CcchHHHHHHHHHHHHhhHHHHHHHHHHHHhcc--CCcEEEECcchhhHHHHHHhcCCCEEEeccCCcc-----------
Confidence 11 111111 1111113356677888888 9999999988778889999999999987532110
Q ss_pred CCCCCCCCCCCccccCCCCCCCCCCCccccchhhhccCCCCCchHHHHHHhh-hccCCcEEeecchHHhhHHHHHHHHHh
Q 042753 149 LPTNDDPDNVDALVSFPRVPNCPVYPWYQISHLYRTLKEGDPDWDLHRSNMM-ANKTSWGIVFNSFAELERVYIDHMKKE 227 (473)
Q Consensus 149 ~p~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~s~~~le~~~~~~~~~~ 227 (473)
..+ . ...+.. ...+...+... .......++.++...++.+. .
T Consensus 141 ---------------~~~------~-----~~~~~~-----~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~------~ 183 (384)
T 2p6p_A 141 ---------------ADG------I-----HPGADA-----ELRPELSELGLERLPAPDLFIDICPPSLRPAN------A 183 (384)
T ss_dssp ---------------CTT------T-----HHHHHH-----HTHHHHHHTTCSSCCCCSEEEECSCGGGSCTT------S
T ss_pred ---------------cch------h-----hHHHHH-----HHHHHHHHcCCCCCCCCCeEEEECCHHHCCCC------C
Confidence 000 0 000000 00111111100 00113445666655444210 0
Q ss_pred hCCCcEEEeccCCCCCCcchhhccCCCCCCCChhhhHHHhcCCCCCcEEEEEeCCcccC-----CHHHHHHHHHHHHhCC
Q 042753 228 MGHDRVWAVGPVLPPDDDLVESMCRGGSSSVPAHDVLTWLDSRRDESVVYVCFGSRYVL-----TAKQIHELAAALEKTD 302 (473)
Q Consensus 228 ~~~~~~~~vGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~V~vs~Gs~~~~-----~~~~~~~~~~al~~~~ 302 (473)
++.+++.+++ ... +.++.+|++.++++++|||++||.... +.+.+..+++++++.+
T Consensus 184 ~~~~~~~~~~---~~~----------------~~~~~~~l~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~~~~~~al~~~~ 244 (384)
T 2p6p_A 184 APARMMRHVA---TSR----------------QCPLEPWMYTRDTRQRVLVTSGSRVAKESYDRNFDFLRGLAKDLVRWD 244 (384)
T ss_dssp CCCEECCCCC---CCC----------------CCBCCHHHHCCCSSCEEEEECSSSSSCCSSCCCCTTHHHHHHHHHTTT
T ss_pred CCCCceEecC---CCC----------------CCCCCchhhcCCCCCEEEEECCCCCccccccccHHHHHHHHHHHhcCC
Confidence 1101222221 111 123456887645678999999999764 4577888999999999
Q ss_pred CcEEEEEeCCCccCCcccCCCCchhhHHhhcCCCeEeecCccHHHhhhccCccceeeccCchhHHHHHhhCCeEecCccc
Q 042753 303 VDFVYCVREPDERHASQDCGVLPDGFEDRVAGRGYVIRGWSQQVAILRHKAVGAFLTHCGWNSVLEGVSAGVVMLTWPMD 382 (473)
Q Consensus 303 ~~~i~~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~v~~~~pq~~lL~~~~v~~~ItHgG~~s~~eal~~GvP~l~~P~~ 382 (473)
.+++|+++.+. .+.+.+ .++|+.+ +|+||.++|+++++ ||||||+||+.||+++|+|+|++|..
T Consensus 245 ~~~~~~~g~~~-----------~~~l~~--~~~~v~~-~~~~~~~~l~~~d~--~v~~~G~~t~~Ea~~~G~P~v~~p~~ 308 (384)
T 2p6p_A 245 VELIVAAPDTV-----------AEALRA--EVPQARV-GWTPLDVVAPTCDL--LVHHAGGVSTLTGLSAGVPQLLIPKG 308 (384)
T ss_dssp CEEEEECCHHH-----------HHHHHH--HCTTSEE-ECCCHHHHGGGCSE--EEECSCTTHHHHHHHTTCCEEECCCS
T ss_pred cEEEEEeCCCC-----------HHhhCC--CCCceEE-cCCCHHHHHhhCCE--EEeCCcHHHHHHHHHhCCCEEEccCc
Confidence 99999987531 011211 2468899 99999999999887 99999999999999999999999999
Q ss_pred ccchhhHHHHHHHhcceEEeccCCCCCCCHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHH
Q 042753 383 ADQYTNAQLLVDQLGVGIRVGEGTRNIPESDELARLLAQSVDGPRRERLKARELSGAALSAVVKGGSSDRDLNDFIKRIN 462 (473)
Q Consensus 383 ~DQ~~na~rv~~~~G~G~~l~~~~~~~~~~~~l~~~i~~~l~~~~~~~~~a~~~~~~~~~~~~~~gs~~~~~~~~~~~~~ 462 (473)
.||+.||.++++ .|+|+.++ .++++.++|.++|+++++|+ +++++++++++.++ ..++.+++++.+.+.+.
T Consensus 309 ~dq~~~a~~~~~-~g~g~~~~---~~~~~~~~l~~~i~~ll~~~-~~~~~~~~~~~~~~----~~~~~~~~~~~i~~~~~ 379 (384)
T 2p6p_A 309 SVLEAPARRVAD-YGAAIALL---PGEDSTEAIADSCQELQAKD-TYARRAQDLSREIS----GMPLPATVVTALEQLAH 379 (384)
T ss_dssp HHHHHHHHHHHH-HTSEEECC---TTCCCHHHHHHHHHHHHHCH-HHHHHHHHHHHHHH----TSCCHHHHHHHHHHHHH
T ss_pred ccchHHHHHHHH-CCCeEecC---cCCCCHHHHHHHHHHHHcCH-HHHHHHHHHHHHHH----hCCCHHHHHHHHHHHhh
Confidence 999999999994 59999998 77889999999999999997 99999999999995 45678888888887776
Q ss_pred hh
Q 042753 463 EL 464 (473)
Q Consensus 463 ~~ 464 (473)
.+
T Consensus 380 ~~ 381 (384)
T 2p6p_A 380 HH 381 (384)
T ss_dssp HH
T ss_pred hc
Confidence 53
|
| >3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-35 Score=293.59 Aligned_cols=351 Identities=17% Similarity=0.166 Sum_probs=238.0
Q ss_pred ccEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCCCChhhhhhhccCCCCCCeeEEEcCCCCC--------------
Q 042753 5 GAHILVYPFPTSGHIIPLLDLTNRLLTLGLNVTVLITQNNLPLLDSLNANHPSTSLQSLVLPQPKW-------------- 70 (473)
Q Consensus 5 ~~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~i~~~~~~~~~~~~~f~~l~~~~~-------------- 70 (473)
||||+|++.++.||++|+++|+++|.++||+|+++++ .+.+.+... ++.+..++....
T Consensus 20 ~MrIl~~~~~~~Ghv~~~~~La~~L~~~GheV~v~~~-~~~~~~~~~-------G~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (398)
T 3oti_A 20 HMRVLFVSSPGIGHLFPLIQLAWGFRTAGHDVLIAVA-EHADRAAAA-------GLEVVDVAPDYSAVKVFEQVAKDNPR 91 (398)
T ss_dssp CCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEES-SCHHHHHTT-------TCEEEESSTTCCHHHHHHHHHHHCHH
T ss_pred cCEEEEEcCCCcchHhHHHHHHHHHHHCCCEEEEecc-chHHHHHhC-------CCeeEecCCccCHHHHhhhcccCCcc
Confidence 6899999999999999999999999999999999999 777777655 788888774210
Q ss_pred -------CCCCChhhHHHHHHHHHHHhhHHHHHHHhcCCCCCcEEEeCCCcchHHHHHHHhCCCcEEEecchHHHHHHHH
Q 042753 71 -------PAGSPATRLLKFMRVLRELHYPALLDWFKSHPSPPVAILSDFFLGWTQGLAAELGLPRVVFSPSGAFALSVSF 143 (473)
Q Consensus 71 -------~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~pD~VV~D~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~ 143 (473)
........+..++..........+.++++++ +||+||+|...+++..+|+.+|||+|.........
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~--~pDlVv~d~~~~~~~~aA~~~giP~v~~~~~~~~~----- 164 (398)
T 3oti_A 92 FAETVATRPAIDLEEWGVQIAAVNRPLVDGTMALVDDY--RPDLVVYEQGATVGLLAADRAGVPAVQRNQSAWRT----- 164 (398)
T ss_dssp HHHTGGGSCCCSGGGGHHHHHHHHGGGHHHHHHHHHHH--CCSEEEEETTCHHHHHHHHHHTCCEEEECCTTCCC-----
T ss_pred ccccccCChhhhHHHHHHHHHHHHHHHHHHHHHHHHHc--CCCEEEECchhhHHHHHHHHcCCCEEEEeccCCCc-----
Confidence 0000011112222222225567888999999 99999999888888999999999999864331100
Q ss_pred hhhccCCCCCCCCCCCccccCCCCCCCCCCCccccchhhhccCCCCCchHHHHHHhhhccCCcEEeecchHHhhHHHHHH
Q 042753 144 AMWTDLPTNDDPDNVDALVSFPRVPNCPVYPWYQISHLYRTLKEGDPDWDLHRSNMMANKTSWGIVFNSFAELERVYIDH 223 (473)
Q Consensus 144 ~~~~~~p~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~le~~~~~~ 223 (473)
. . ..... .....+.+.+...........+......+..+
T Consensus 165 -------------------------~---~----~~~~~-----~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 203 (398)
T 3oti_A 165 -------------------------R---G----MHRSI-----ASFLTDLMDKHQVSLPEPVATIESFPPSLLLE---- 203 (398)
T ss_dssp -------------------------T---T----HHHHH-----HTTCHHHHHHTTCCCCCCSEEECSSCGGGGTT----
T ss_pred -------------------------c---c----hhhHH-----HHHHHHHHHHcCCCCCCCCeEEEeCCHHHCCC----
Confidence 0 0 00000 00011111111111111122221111111110
Q ss_pred HHHhhCCCcEEEeccCCCCCCcchhhccCCCCCCCChhhhHHHhcCCCCCcEEEEEeCCcccC--CHHHHHHHHHHHHhC
Q 042753 224 MKKEMGHDRVWAVGPVLPPDDDLVESMCRGGSSSVPAHDVLTWLDSRRDESVVYVCFGSRYVL--TAKQIHELAAALEKT 301 (473)
Q Consensus 224 ~~~~~~~~~~~~vGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~V~vs~Gs~~~~--~~~~~~~~~~al~~~ 301 (473)
..... ..+.++ | ...+..+.+|+....++++|||++||.... ..+.+..+++++++.
T Consensus 204 -~~~~~-~~~~~~-~------------------~~~~~~~~~~~~~~~~~~~v~v~~G~~~~~~~~~~~~~~~~~~l~~~ 262 (398)
T 3oti_A 204 -AEPEG-WFMRWV-P------------------YGGGAVLGDRLPPVPARPEVAITMGTIELQAFGIGAVEPIIAAAGEV 262 (398)
T ss_dssp -SCCCS-BCCCCC-C------------------CCCCEECCSSCCCCCSSCEEEECCTTTHHHHHCGGGHHHHHHHHHTS
T ss_pred -CCCCC-CCcccc-C------------------CCCCcCCchhhhcCCCCCEEEEEcCCCccccCcHHHHHHHHHHHHcC
Confidence 00000 001111 0 011123345666556789999999999543 567788899999999
Q ss_pred CCcEEEEEeCCCccCCcccCCCCchhhHHhhcCCCeEeecCccHHHhhhccCccceeeccCchhHHHHHhhCCeEecCcc
Q 042753 302 DVDFVYCVREPDERHASQDCGVLPDGFEDRVAGRGYVIRGWSQQVAILRHKAVGAFLTHCGWNSVLEGVSAGVVMLTWPM 381 (473)
Q Consensus 302 ~~~~i~~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~v~~~~pq~~lL~~~~v~~~ItHgG~~s~~eal~~GvP~l~~P~ 381 (473)
+.+++|+.+.+. ....+.+ ++|+.+.+|+|+.++|+++++ ||||||.||+.||+++|+|+|++|.
T Consensus 263 ~~~~v~~~g~~~----~~~l~~~---------~~~v~~~~~~~~~~ll~~ad~--~v~~~G~~t~~Eal~~G~P~v~~p~ 327 (398)
T 3oti_A 263 DADFVLALGDLD----ISPLGTL---------PRNVRAVGWTPLHTLLRTCTA--VVHHGGGGTVMTAIDAGIPQLLAPD 327 (398)
T ss_dssp SSEEEEECTTSC----CGGGCSC---------CTTEEEESSCCHHHHHTTCSE--EEECCCHHHHHHHHHHTCCEEECCC
T ss_pred CCEEEEEECCcC----hhhhccC---------CCcEEEEccCCHHHHHhhCCE--EEECCCHHHHHHHHHhCCCEEEcCC
Confidence 999999988753 1111112 368999999999999999997 9999999999999999999999999
Q ss_pred cccchhhH--HHHHHHhcceEEeccCCCCCCCHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHH
Q 042753 382 DADQYTNA--QLLVDQLGVGIRVGEGTRNIPESDELARLLAQSVDGPRRERLKARELSGAALSAVVKGGSSDRDLNDFIK 459 (473)
Q Consensus 382 ~~DQ~~na--~rv~~~~G~G~~l~~~~~~~~~~~~l~~~i~~~l~~~~~~~~~a~~~~~~~~~~~~~~gs~~~~~~~~~~ 459 (473)
..||..|+ .++++. |+|+.++ ..+.+++.|. ++++|+ ++++++++.++.+. ...+.++.++.+++
T Consensus 328 ~~dq~~~a~~~~~~~~-g~g~~~~---~~~~~~~~l~----~ll~~~-~~~~~~~~~~~~~~----~~~~~~~~~~~l~~ 394 (398)
T 3oti_A 328 PRDQFQHTAREAVSRR-GIGLVST---SDKVDADLLR----RLIGDE-SLRTAAREVREEMV----ALPTPAETVRRIVE 394 (398)
T ss_dssp TTCCSSCTTHHHHHHH-TSEEECC---GGGCCHHHHH----HHHHCH-HHHHHHHHHHHHHH----TSCCHHHHHHHHHH
T ss_pred CchhHHHHHHHHHHHC-CCEEeeC---CCCCCHHHHH----HHHcCH-HHHHHHHHHHHHHH----hCCCHHHHHHHHHH
Confidence 99999999 999955 9999998 6777888776 888897 99999999999985 44566766666655
Q ss_pred H
Q 042753 460 R 460 (473)
Q Consensus 460 ~ 460 (473)
.
T Consensus 395 l 395 (398)
T 3oti_A 395 R 395 (398)
T ss_dssp H
T ss_pred H
Confidence 4
|
| >4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-36 Score=298.23 Aligned_cols=355 Identities=19% Similarity=0.115 Sum_probs=226.0
Q ss_pred CccEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCCCChhhhhhhccCCCCCCeeEEEcCCCCC-------------
Q 042753 4 AGAHILVYPFPTSGHIIPLLDLTNRLLTLGLNVTVLITQNNLPLLDSLNANHPSTSLQSLVLPQPKW------------- 70 (473)
Q Consensus 4 ~~~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~i~~~~~~~~~~~~~f~~l~~~~~------------- 70 (473)
.+|||+|++.++.||++|+++|+++|.++||+|++++++.+.+.+... ++.+..++....
T Consensus 14 ~~MrIl~~~~~~~gh~~~~~~La~~L~~~GheV~v~~~~~~~~~~~~~-------G~~~~~~~~~~~~~~~~~~~~~~~~ 86 (398)
T 4fzr_A 14 SHMRILVIAGCSEGFVMPLVPLSWALRAAGHEVLVAASENMGPTVTGA-------GLPFAPTCPSLDMPEVLSWDREGNR 86 (398)
T ss_dssp -CCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEEEGGGHHHHHHT-------TCCEEEEESSCCHHHHHSBCTTSCB
T ss_pred CceEEEEEcCCCcchHHHHHHHHHHHHHCCCEEEEEcCHHHHHHHHhC-------CCeeEecCCccchHhhhhhhccCcc
Confidence 478999999999999999999999999999999999998777777665 677776652100
Q ss_pred CCCCCh--hhHH---HHHHHHHHHhhHHHHHHHhcCCCCCcEEEeCCCcchHHHHHHHhCCCcEEEecchHHHHHHHHhh
Q 042753 71 PAGSPA--TRLL---KFMRVLRELHYPALLDWFKSHPSPPVAILSDFFLGWTQGLAAELGLPRVVFSPSGAFALSVSFAM 145 (473)
Q Consensus 71 ~~~~~~--~~~~---~~~~~~~~~~~~~l~~~l~~~~~~pD~VV~D~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~ 145 (473)
...+.. ..+. .++..........+.++++++ +||+||+|...+++..+|+.+|||+|.+..............
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~pDlVv~d~~~~~~~~~a~~~giP~v~~~~~~~~~~~~~~~~ 164 (398)
T 4fzr_A 87 TTMPREEKPLLEHIGRGYGRLVLRMRDEALALAERW--KPDLVLTETYSLTGPLVAATLGIPWIEQSIRLASPELIKSAG 164 (398)
T ss_dssp CCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--CCSEEEEETTCTHHHHHHHHHTCCEEEECCSSCCCHHHHHHH
T ss_pred cccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhC--CCCEEEECccccHHHHHHHhhCCCEEEeccCCCCchhhhHHH
Confidence 001100 1111 111111224456788889999 999999998777889999999999998754421100000000
Q ss_pred hccCCCCCCCCCCCccccCCCCCCCCCCCccccchhhhccCCCCCchHHHHHHhh-hccCCcEEeecchHHhhHHHHHHH
Q 042753 146 WTDLPTNDDPDNVDALVSFPRVPNCPVYPWYQISHLYRTLKEGDPDWDLHRSNMM-ANKTSWGIVFNSFAELERVYIDHM 224 (473)
Q Consensus 146 ~~~~p~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~s~~~le~~~~~~~ 224 (473)
. .. ..+.+.+... ........+......+....
T Consensus 165 ~---------------------------------~~---------l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 198 (398)
T 4fzr_A 165 V---------------------------------GE---------LAPELAELGLTDFPDPLLSIDVCPPSMEAQP---- 198 (398)
T ss_dssp H---------------------------------HH---------THHHHHTTTCSSCCCCSEEEECSCGGGC-------
T ss_pred H---------------------------------HH---------HHHHHHHcCCCCCCCCCeEEEeCChhhCCCC----
Confidence 0 00 0000000000 00011112222212222110
Q ss_pred HHhhCCCcEEEeccCCCCCCcchhhccCCCCCCCChhhhHHHhcCCCCCcEEEEEeCCcccC--------CHHHHHHHHH
Q 042753 225 KKEMGHDRVWAVGPVLPPDDDLVESMCRGGSSSVPAHDVLTWLDSRRDESVVYVCFGSRYVL--------TAKQIHELAA 296 (473)
Q Consensus 225 ~~~~~~~~~~~vGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~V~vs~Gs~~~~--------~~~~~~~~~~ 296 (473)
. .....+...... ....++.+|+....++++|||++||.... ..+.+..+++
T Consensus 199 -~----~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~v~v~~G~~~~~~~~~~~~~~~~~~~~~~~ 258 (398)
T 4fzr_A 199 -K----PGTTKMRYVPYN---------------GRNDQVPSWVFEERKQPRLCLTFGTRVPLPNTNTIPGGLSLLQALSQ 258 (398)
T ss_dssp ------CCCEECCCCCCC---------------CSSCCCCHHHHSCCSSCEEECC----------------CCSHHHHHH
T ss_pred -C----CCCCCeeeeCCC---------------CCCCCCchhhhcCCCCCEEEEEccCcccccccccccchHHHHHHHHH
Confidence 0 111111111111 01223446776656789999999999643 3456788999
Q ss_pred HHHhCCCcEEEEEeCCCccCCcccCCCCchhhHHhhcCCCeEeecCccHHHhhhccCccceeeccCchhHHHHHhhCCeE
Q 042753 297 ALEKTDVDFVYCVREPDERHASQDCGVLPDGFEDRVAGRGYVIRGWSQQVAILRHKAVGAFLTHCGWNSVLEGVSAGVVM 376 (473)
Q Consensus 297 al~~~~~~~i~~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~v~~~~pq~~lL~~~~v~~~ItHgG~~s~~eal~~GvP~ 376 (473)
++++.+.+++|+.+... . +.+.. .++|+++.+|+|+.++|+++++ ||||||.||+.||+++|+|+
T Consensus 259 al~~~~~~~v~~~~~~~----~---~~l~~------~~~~v~~~~~~~~~~ll~~ad~--~v~~gG~~t~~Ea~~~G~P~ 323 (398)
T 4fzr_A 259 ELPKLGFEVVVAVSDKL----A---QTLQP------LPEGVLAAGQFPLSAIMPACDV--VVHHGGHGTTLTCLSEGVPQ 323 (398)
T ss_dssp HGGGGTCEEEECCCC---------------------CCTTEEEESCCCHHHHGGGCSE--EEECCCHHHHHHHHHTTCCE
T ss_pred HHHhCCCEEEEEeCCcc----h---hhhcc------CCCcEEEeCcCCHHHHHhhCCE--EEecCCHHHHHHHHHhCCCE
Confidence 99988999999888752 0 11111 2478999999999999999997 99999999999999999999
Q ss_pred ecCcccccchhhHHHHHHHhcceEEeccCCCCCCCHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHhcCCChHHHHHH
Q 042753 377 LTWPMDADQYTNAQLLVDQLGVGIRVGEGTRNIPESDELARLLAQSVDGPRRERLKARELSGAALSAVVKGGSSDRDLND 456 (473)
Q Consensus 377 l~~P~~~DQ~~na~rv~~~~G~G~~l~~~~~~~~~~~~l~~~i~~~l~~~~~~~~~a~~~~~~~~~~~~~~gs~~~~~~~ 456 (473)
|++|...||+.|+.++++. |+|+.+. .++++.+.|.++|+++++|+ ++++++++.++.+. ...+.++.++.
T Consensus 324 v~~p~~~~q~~~a~~~~~~-g~g~~~~---~~~~~~~~l~~ai~~ll~~~-~~~~~~~~~~~~~~----~~~~~~~~~~~ 394 (398)
T 4fzr_A 324 VSVPVIAEVWDSARLLHAA-GAGVEVP---WEQAGVESVLAACARIRDDS-SYVGNARRLAAEMA----TLPTPADIVRL 394 (398)
T ss_dssp EECCCSGGGHHHHHHHHHT-TSEEECC----------CHHHHHHHHHHCT-HHHHHHHHHHHHHT----TSCCHHHHHHH
T ss_pred EecCCchhHHHHHHHHHHc-CCEEecC---cccCCHHHHHHHHHHHHhCH-HHHHHHHHHHHHHH----cCCCHHHHHHH
Confidence 9999999999999999955 9999998 77889999999999999997 99999999999984 45556665555
Q ss_pred H
Q 042753 457 F 457 (473)
Q Consensus 457 ~ 457 (473)
+
T Consensus 395 l 395 (398)
T 4fzr_A 395 I 395 (398)
T ss_dssp H
T ss_pred H
Confidence 4
|
| >3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-34 Score=283.93 Aligned_cols=357 Identities=17% Similarity=0.142 Sum_probs=236.2
Q ss_pred cEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCCCChhhhhhhccCCCCCCeeEEEc-CCCCC------CCCC----
Q 042753 6 AHILVYPFPTSGHIIPLLDLTNRLLTLGLNVTVLITQNNLPLLDSLNANHPSTSLQSLVL-PQPKW------PAGS---- 74 (473)
Q Consensus 6 ~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~i~~~~~~~~~~~~~f~~l-~~~~~------~~~~---- 74 (473)
|||+|++.++.||++|+++|+++|.++||+|++++++...+.+... ++.+..+ +.+.. ...+
T Consensus 2 MrIl~~~~~~~gh~~~~~~la~~L~~~GheV~v~~~~~~~~~~~~~-------g~~~~~~~~~~~~~~~~~~~~~~~~~~ 74 (391)
T 3tsa_A 2 MRVLVVPLPYPTHLMAMVPLCWALQASGHEVLIAAPPELQATAHGA-------GLTTAGIRGNDRTGDTGGTTQLRFPNP 74 (391)
T ss_dssp CEEEEECCSCHHHHHTTHHHHHHHHHTTCEEEEEECHHHHHHHHHB-------TCEEEEC--------------CCSCCG
T ss_pred cEEEEEcCCCcchhhhHHHHHHHHHHCCCEEEEecChhhHHHHHhC-------CCceeeecCCccchhhhhhhccccccc
Confidence 6999999999999999999999999999999999987666666554 6777766 32110 0000
Q ss_pred -----ChhhHHHHHHHHHHHh-------hHHHHHHHhcCCCCCcEEEeCCCcchHHHHHHHhCCCcEEEecchHHHHHHH
Q 042753 75 -----PATRLLKFMRVLRELH-------YPALLDWFKSHPSPPVAILSDFFLGWTQGLAAELGLPRVVFSPSGAFALSVS 142 (473)
Q Consensus 75 -----~~~~~~~~~~~~~~~~-------~~~l~~~l~~~~~~pD~VV~D~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~ 142 (473)
....+...+......+ ...+.++++++ +||+||+|...+.+..+|+.+|||++.+.......
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~--~PD~Vv~~~~~~~~~~aa~~~giP~v~~~~~~~~~---- 148 (391)
T 3tsa_A 75 AFGQRDTEAGRQLWEQTASNVAQSSLDQLPEYLRLAEAW--RPSVLLVDVCALIGRVLGGLLDLPVVLHRWGVDPT---- 148 (391)
T ss_dssp GGGCTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--CCSEEEEETTCHHHHHHHHHTTCCEEEECCSCCCT----
T ss_pred ccccccchhHHHHHHHHHHHHhhcchhhHHHHHHHHHhc--CCCEEEeCcchhHHHHHHHHhCCCEEEEecCCccc----
Confidence 0011111222212133 66788999999 99999999877778889999999999875332100
Q ss_pred HhhhccCCCCCCCCCCCccccCCCCCCCCCCCccccchhhhccCCCCCchHHHHHHhhhc-cCCcEEeecchHHhhHHHH
Q 042753 143 FAMWTDLPTNDDPDNVDALVSFPRVPNCPVYPWYQISHLYRTLKEGDPDWDLHRSNMMAN-KTSWGIVFNSFAELERVYI 221 (473)
Q Consensus 143 ~~~~~~~p~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~s~~~le~~~~ 221 (473)
.......... ...+.+.+..... ......+..+..+++..
T Consensus 149 --------------------------------~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 189 (391)
T 3tsa_A 149 --------------------------------AGPFSDRAHE-----LLDPVCRHHGLTGLPTPELILDPCPPSLQAS-- 189 (391)
T ss_dssp --------------------------------TTHHHHHHHH-----HHHHHHHHTTSSSSCCCSEEEECSCGGGSCT--
T ss_pred --------------------------------cccccchHHH-----HHHHHHHHcCCCCCCCCceEEEecChhhcCC--
Confidence 0000000000 0000011100000 00112222221222110
Q ss_pred HHHHHhhCCCcEEEeccCCCCCCcchhhccCCCCCCCChhhhHHHhcCCCCCcEEEEEeCCccc--CC-HHHHHHHHHHH
Q 042753 222 DHMKKEMGHDRVWAVGPVLPPDDDLVESMCRGGSSSVPAHDVLTWLDSRRDESVVYVCFGSRYV--LT-AKQIHELAAAL 298 (473)
Q Consensus 222 ~~~~~~~~~~~~~~vGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~V~vs~Gs~~~--~~-~~~~~~~~~al 298 (473)
..... ..+.++ |. ..+..+..|+....++++|||++||... .. .+.+..++++
T Consensus 190 ---~~~~~-~~~~~~-p~------------------~~~~~~~~~~~~~~~~~~vlv~~G~~~~~~~~~~~~~~~~~~~- 245 (391)
T 3tsa_A 190 ---DAPQG-APVQYV-PY------------------NGSGAFPAWGAARTSARRVCICMGRMVLNATGPAPLLRAVAAA- 245 (391)
T ss_dssp ---TSCCC-EECCCC-CC------------------CCCEECCGGGSSCCSSEEEEEECCHHHHHHHCSHHHHHHHHHH-
T ss_pred ---CCCcc-CCeeee-cC------------------CCCcCCCchhhcCCCCCEEEEEcCCCCCcccchHHHHHHHHHh-
Confidence 00000 011122 11 0112334577655678999999999843 34 7778888888
Q ss_pred HhC-CCcEEEEEeCCCccCCcccCCCCchhhHHhhcCCCeEeecCccHHHhhhccCccceeeccCchhHHHHHhhCCeEe
Q 042753 299 EKT-DVDFVYCVREPDERHASQDCGVLPDGFEDRVAGRGYVIRGWSQQVAILRHKAVGAFLTHCGWNSVLEGVSAGVVML 377 (473)
Q Consensus 299 ~~~-~~~~i~~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~v~~~~pq~~lL~~~~v~~~ItHgG~~s~~eal~~GvP~l 377 (473)
++. +.+++|+.+.+. . +.+.. .++|+.+.+|+|+.++|+++++ ||||||.||+.||+++|+|+|
T Consensus 246 ~~~p~~~~v~~~~~~~----~---~~l~~------~~~~v~~~~~~~~~~ll~~ad~--~v~~~G~~t~~Ea~~~G~P~v 310 (391)
T 3tsa_A 246 TELPGVEAVIAVPPEH----R---ALLTD------LPDNARIAESVPLNLFLRTCEL--VICAGGSGTAFTATRLGIPQL 310 (391)
T ss_dssp HTSTTEEEEEECCGGG----G---GGCTT------CCTTEEECCSCCGGGTGGGCSE--EEECCCHHHHHHHHHTTCCEE
T ss_pred ccCCCeEEEEEECCcc----h---hhccc------CCCCEEEeccCCHHHHHhhCCE--EEeCCCHHHHHHHHHhCCCEE
Confidence 877 788998887642 1 11211 2468999999999999999997 999999999999999999999
Q ss_pred cCcccccchhhHHHHHHHhcceEEeccCCC--CCCCHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHhcCCChHHHHH
Q 042753 378 TWPMDADQYTNAQLLVDQLGVGIRVGEGTR--NIPESDELARLLAQSVDGPRRERLKARELSGAALSAVVKGGSSDRDLN 455 (473)
Q Consensus 378 ~~P~~~DQ~~na~rv~~~~G~G~~l~~~~~--~~~~~~~l~~~i~~~l~~~~~~~~~a~~~~~~~~~~~~~~gs~~~~~~ 455 (473)
++|...||+.|+.++++. |+|+.+. . .+.+.+.|.++|+++++|+ +++++++++++.+. ..++.++.++
T Consensus 311 ~~p~~~~q~~~a~~~~~~-g~g~~~~---~~~~~~~~~~l~~ai~~ll~~~-~~~~~~~~~~~~~~----~~~~~~~~~~ 381 (391)
T 3tsa_A 311 VLPQYFDQFDYARNLAAA-GAGICLP---DEQAQSDHEQFTDSIATVLGDT-GFAAAAIKLSDEIT----AMPHPAALVR 381 (391)
T ss_dssp ECCCSTTHHHHHHHHHHT-TSEEECC---SHHHHTCHHHHHHHHHHHHTCT-HHHHHHHHHHHHHH----TSCCHHHHHH
T ss_pred ecCCcccHHHHHHHHHHc-CCEEecC---cccccCCHHHHHHHHHHHHcCH-HHHHHHHHHHHHHH----cCCCHHHHHH
Confidence 999999999999999955 9999998 6 6689999999999999997 99999999999884 4566777777
Q ss_pred HHHHHHH
Q 042753 456 DFIKRIN 462 (473)
Q Consensus 456 ~~~~~~~ 462 (473)
.+++.+.
T Consensus 382 ~i~~~~~ 388 (391)
T 3tsa_A 382 TLENTAA 388 (391)
T ss_dssp HHHHC--
T ss_pred HHHHHHh
Confidence 6665543
|
| >3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.4e-32 Score=267.61 Aligned_cols=364 Identities=17% Similarity=0.182 Sum_probs=244.4
Q ss_pred CccEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCCCChhhhhhhccCCCCCCeeEEEcCCC-------------CC
Q 042753 4 AGAHILVYPFPTSGHIIPLLDLTNRLLTLGLNVTVLITQNNLPLLDSLNANHPSTSLQSLVLPQP-------------KW 70 (473)
Q Consensus 4 ~~~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~i~~~~~~~~~~~~~f~~l~~~-------------~~ 70 (473)
.+|||++++.++.||++|+++|+++|.++||+|++++++...+.+... ++.+..++.. ..
T Consensus 19 ~~MrIl~~~~~~~Gh~~~~~~la~~L~~~GheV~v~~~~~~~~~~~~~-------g~~~~~~~~~~~~~~~~~~~~~~~~ 91 (412)
T 3otg_A 19 RHMRVLFASLGTHGHTYPLLPLATAARAAGHEVTFATGEGFAGTLRKL-------GFEPVATGMPVFDGFLAALRIRFDT 91 (412)
T ss_dssp CSCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEECGGGHHHHHHT-------TCEEEECCCCHHHHHHHHHHHHHSC
T ss_pred ceeEEEEEcCCCcccHHHHHHHHHHHHHCCCEEEEEccHHHHHHHHhc-------CCceeecCcccccchhhhhhhhhcc
Confidence 478999999999999999999999999999999999998665555544 7888877630 00
Q ss_pred CCC---CCh---hhHHHHHHHH-HHHhhHHHHHHHhcCCCCCcEEEeCCCcchHHHHHHHhCCCcEEEecchHHHHHHHH
Q 042753 71 PAG---SPA---TRLLKFMRVL-RELHYPALLDWFKSHPSPPVAILSDFFLGWTQGLAAELGLPRVVFSPSGAFALSVSF 143 (473)
Q Consensus 71 ~~~---~~~---~~~~~~~~~~-~~~~~~~l~~~l~~~~~~pD~VV~D~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~ 143 (473)
... ... ..+...+... .......+.+++++. +||+||+|....++..+|+.+|||+|.+............
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~--~pDvVv~~~~~~~~~~aa~~~giP~v~~~~~~~~~~~~~~ 169 (412)
T 3otg_A 92 DSPEGLTPEQLSELPQIVFGRVIPQRVFDELQPVIERL--RPDLVVQEISNYGAGLAALKAGIPTICHGVGRDTPDDLTR 169 (412)
T ss_dssp SCCTTCCHHHHTTSHHHHHHTHHHHHHHHHHHHHHHHH--CCSEEEEETTCHHHHHHHHHHTCCEEEECCSCCCCSHHHH
T ss_pred cCCccCChhHhhHHHHHHHhccchHHHHHHHHHHHHhc--CCCEEEECchhhHHHHHHHHcCCCEEEecccccCchhhhH
Confidence 000 000 1111111111 213446788889999 9999999977777888999999999886433210000000
Q ss_pred hhhccCCCCCCCCCCCccccCCCCCCCCCCCccccchhhhccCCCCCchHHHHHHhhh------ccCCcEEeecchHHhh
Q 042753 144 AMWTDLPTNDDPDNVDALVSFPRVPNCPVYPWYQISHLYRTLKEGDPDWDLHRSNMMA------NKTSWGIVFNSFAELE 217 (473)
Q Consensus 144 ~~~~~~p~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~s~~~le 217 (473)
.+... ..+...+.... ......++..+-..++
T Consensus 170 ---------------------------------~~~~~---------~~~~~~~~g~~~~~~~~~~~~d~~i~~~~~~~~ 207 (412)
T 3otg_A 170 ---------------------------------SIEEE---------VRGLAQRLGLDLPPGRIDGFGNPFIDIFPPSLQ 207 (412)
T ss_dssp ---------------------------------HHHHH---------HHHHHHHTTCCCCSSCCGGGGCCEEECSCGGGS
T ss_pred ---------------------------------HHHHH---------HHHHHHHcCCCCCcccccCCCCeEEeeCCHHhc
Confidence 00000 00000000000 0111222222222222
Q ss_pred HHHHHHHHHhhCCCcEEEeccCCCCCCcchhhccCCCCCCCChhhhHHH-hcCCCCCcEEEEEeCCcccCCHHHHHHHHH
Q 042753 218 RVYIDHMKKEMGHDRVWAVGPVLPPDDDLVESMCRGGSSSVPAHDVLTW-LDSRRDESVVYVCFGSRYVLTAKQIHELAA 296 (473)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~vGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~-l~~~~~~~~V~vs~Gs~~~~~~~~~~~~~~ 296 (473)
.. ...+. .....+.+..... .....+| .....++++||+++||......+.+..+++
T Consensus 208 ~~-----~~~~~-~~~~~~~~~~~~~----------------~~~~~~~~~~~~~~~~~vlv~~G~~~~~~~~~~~~~~~ 265 (412)
T 3otg_A 208 EP-----EFRAR-PRRHELRPVPFAE----------------QGDLPAWLSSRDTARPLVYLTLGTSSGGTVEVLRAAID 265 (412)
T ss_dssp CH-----HHHTC-TTEEECCCCCCCC----------------CCCCCGGGGGSCTTSCEEEEECTTTTCSCHHHHHHHHH
T ss_pred CC-----cccCC-CCcceeeccCCCC----------------CCCCCCccccccCCCCEEEEEcCCCCcCcHHHHHHHHH
Confidence 11 11111 1222222111111 1123345 232357889999999997667788999999
Q ss_pred HHHhCCCcEEEEEeCCCccCCcccCCCCchhhHHhhcCCCeEeecCccHHHhhhccCccceeeccCchhHHHHHhhCCeE
Q 042753 297 ALEKTDVDFVYCVREPDERHASQDCGVLPDGFEDRVAGRGYVIRGWSQQVAILRHKAVGAFLTHCGWNSVLEGVSAGVVM 376 (473)
Q Consensus 297 al~~~~~~~i~~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~v~~~~pq~~lL~~~~v~~~ItHgG~~s~~eal~~GvP~ 376 (473)
++++.+.+++|+.+... +.+.+.. .++|+.+.+|+|+.++|+++++ ||+|||+||++||+++|+|+
T Consensus 266 ~l~~~~~~~~~~~g~~~------~~~~l~~------~~~~v~~~~~~~~~~~l~~ad~--~v~~~g~~t~~Ea~a~G~P~ 331 (412)
T 3otg_A 266 GLAGLDADVLVASGPSL------DVSGLGE------VPANVRLESWVPQAALLPHVDL--VVHHGGSGTTLGALGAGVPQ 331 (412)
T ss_dssp HHHTSSSEEEEECCSSC------CCTTCCC------CCTTEEEESCCCHHHHGGGCSE--EEESCCHHHHHHHHHHTCCE
T ss_pred HHHcCCCEEEEEECCCC------Chhhhcc------CCCcEEEeCCCCHHHHHhcCcE--EEECCchHHHHHHHHhCCCE
Confidence 99988999999988752 1122221 2368999999999999999997 99999999999999999999
Q ss_pred ecCcccccchhhHHHHHHHhcceEEeccCCCCCCCHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHhcCCChHHHHHH
Q 042753 377 LTWPMDADQYTNAQLLVDQLGVGIRVGEGTRNIPESDELARLLAQSVDGPRRERLKARELSGAALSAVVKGGSSDRDLND 456 (473)
Q Consensus 377 l~~P~~~DQ~~na~rv~~~~G~G~~l~~~~~~~~~~~~l~~~i~~~l~~~~~~~~~a~~~~~~~~~~~~~~gs~~~~~~~ 456 (473)
|++|...||..|+.++++. |+|..+. ..++++++|.++|.++++|+ ++++++.+.++.+. ...+.++.++.
T Consensus 332 v~~p~~~~q~~~~~~v~~~-g~g~~~~---~~~~~~~~l~~ai~~ll~~~-~~~~~~~~~~~~~~----~~~~~~~~~~~ 402 (412)
T 3otg_A 332 LSFPWAGDSFANAQAVAQA-GAGDHLL---PDNISPDSVSGAAKRLLAEE-SYRAGARAVAAEIA----AMPGPDEVVRL 402 (412)
T ss_dssp EECCCSTTHHHHHHHHHHH-TSEEECC---GGGCCHHHHHHHHHHHHHCH-HHHHHHHHHHHHHH----HSCCHHHHHTT
T ss_pred EecCCchhHHHHHHHHHHc-CCEEecC---cccCCHHHHHHHHHHHHhCH-HHHHHHHHHHHHHh----cCCCHHHHHHH
Confidence 9999999999999999955 9999998 67789999999999999997 99999999988885 34567777777
Q ss_pred HHHHHHh
Q 042753 457 FIKRINE 463 (473)
Q Consensus 457 ~~~~~~~ 463 (473)
+.+.+.+
T Consensus 403 ~~~l~~~ 409 (412)
T 3otg_A 403 LPGFASR 409 (412)
T ss_dssp HHHHHC-
T ss_pred HHHHhcc
Confidence 7766543
|
| >3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.96 E-value=2e-28 Score=238.88 Aligned_cols=312 Identities=17% Similarity=0.135 Sum_probs=194.4
Q ss_pred cEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCCCCh--hhhhhhccCCCCCCeeEEEcCCCCCCCCCChhhHHHHH
Q 042753 6 AHILVYPFPTSGHIIPLLDLTNRLLTLGLNVTVLITQNNL--PLLDSLNANHPSTSLQSLVLPQPKWPAGSPATRLLKFM 83 (473)
Q Consensus 6 ~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~--~~i~~~~~~~~~~~~~f~~l~~~~~~~~~~~~~~~~~~ 83 (473)
+||++...++-||++|.++||++|.++||+|+|+++.... +.+.+. ++.+..++.....+......+...+
T Consensus 3 ~~i~i~~GGTgGHi~palala~~L~~~g~~V~~vg~~~g~e~~~v~~~-------g~~~~~i~~~~~~~~~~~~~~~~~~ 75 (365)
T 3s2u_A 3 GNVLIMAGGTGGHVFPALACAREFQARGYAVHWLGTPRGIENDLVPKA-------GLPLHLIQVSGLRGKGLKSLVKAPL 75 (365)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEECSSSTHHHHTGGG-------TCCEEECC--------------CHH
T ss_pred CcEEEEcCCCHHHHHHHHHHHHHHHhCCCEEEEEECCchHhhchhhhc-------CCcEEEEECCCcCCCCHHHHHHHHH
Confidence 5788888777799999999999999999999999987542 223443 6778777642211111111111111
Q ss_pred HHHHHHhhHHHHHHHhcCCCCCcEEEeCCCcc--hHHHHHHHhCCCcEEEecchHHHHHHHHhhhccCCCCCCCCCCCcc
Q 042753 84 RVLRELHYPALLDWFKSHPSPPVAILSDFFLG--WTQGLAAELGLPRVVFSPSGAFALSVSFAMWTDLPTNDDPDNVDAL 161 (473)
Q Consensus 84 ~~~~~~~~~~l~~~l~~~~~~pD~VV~D~~~~--~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 161 (473)
..+. ......+++++. +||+||++.... .+..+|+.+|||++..- +
T Consensus 76 ~~~~--~~~~~~~~l~~~--~PDvVi~~g~~~s~p~~laA~~~~iP~vihe-~--------------------------- 123 (365)
T 3s2u_A 76 ELLK--SLFQALRVIRQL--RPVCVLGLGGYVTGPGGLAARLNGVPLVIHE-Q--------------------------- 123 (365)
T ss_dssp HHHH--HHHHHHHHHHHH--CCSEEEECSSSTHHHHHHHHHHTTCCEEEEE-C---------------------------
T ss_pred HHHH--HHHHHHHHHHhc--CCCEEEEcCCcchHHHHHHHHHcCCCEEEEe-c---------------------------
Confidence 1111 123456788899 999999997655 34577899999998631 1
Q ss_pred ccCCCCCCCCCCCccccchhhhccCCCCCchHHHHHHhhhccCCcEEeecchHHhhHHHHHHHHHhhCCCcEEEeccCCC
Q 042753 162 VSFPRVPNCPVYPWYQISHLYRTLKEGDPDWDLHRSNMMANKTSWGIVFNSFAELERVYIDHMKKEMGHDRVWAVGPVLP 241 (473)
Q Consensus 162 ~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~le~~~~~~~~~~~~~~~~~~vGpl~~ 241 (473)
..+|++.+ +++.+. ... ...++++..+ .. ++..++|+.+.
T Consensus 124 n~~~G~~n-----------------------r~l~~~------a~~-v~~~~~~~~~---------~~-~k~~~~g~pvr 163 (365)
T 3s2u_A 124 NAVAGTAN-----------------------RSLAPI------ARR-VCEAFPDTFP---------AS-DKRLTTGNPVR 163 (365)
T ss_dssp SSSCCHHH-----------------------HHHGGG------CSE-EEESSTTSSC---------C----CEECCCCCC
T ss_pred chhhhhHH-----------------------Hhhccc------cce-eeeccccccc---------Cc-CcEEEECCCCc
Confidence 11122110 010000 111 1122221110 11 35677785544
Q ss_pred CCCcchhhccCCCCCCCChhhhHHHhcCCCCCcEEEEEeCCcccCCHHHHHHHHHHHHhC----CCcEEEEEeCCCccCC
Q 042753 242 PDDDLVESMCRGGSSSVPAHDVLTWLDSRRDESVVYVCFGSRYVLTAKQIHELAAALEKT----DVDFVYCVREPDERHA 317 (473)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~V~vs~Gs~~~~~~~~~~~~~~al~~~----~~~~i~~~~~~~~~~~ 317 (473)
.. . ..... .+....+++++|+|..||..... ..+.+.+++++. +..++|.++...
T Consensus 164 ~~-~-----------~~~~~---~~~~~~~~~~~ilv~gGs~g~~~--~~~~~~~al~~l~~~~~~~vi~~~G~~~---- 222 (365)
T 3s2u_A 164 GE-L-----------FLDAH---ARAPLTGRRVNLLVLGGSLGAEP--LNKLLPEALAQVPLEIRPAIRHQAGRQH---- 222 (365)
T ss_dssp GG-G-----------CCCTT---SSCCCTTSCCEEEECCTTTTCSH--HHHHHHHHHHTSCTTTCCEEEEECCTTT----
T ss_pred hh-h-----------ccchh---hhcccCCCCcEEEEECCcCCccc--cchhhHHHHHhcccccceEEEEecCccc----
Confidence 43 1 00000 01111246789999999986432 223355566543 456777777642
Q ss_pred cccCCCCchhhHHhh--cCCCeEeecCccHH-HhhhccCccceeeccCchhHHHHHhhCCeEecCccc----ccchhhHH
Q 042753 318 SQDCGVLPDGFEDRV--AGRGYVIRGWSQQV-AILRHKAVGAFLTHCGWNSVLEGVSAGVVMLTWPMD----ADQYTNAQ 390 (473)
Q Consensus 318 ~~~~~~lp~~~~~~~--~~~nv~v~~~~pq~-~lL~~~~v~~~ItHgG~~s~~eal~~GvP~l~~P~~----~DQ~~na~ 390 (473)
.+...++. .+.++.+..|+++. ++|+.+|+ +|||+|.+|+.|++++|+|+|++|+. .+|..||+
T Consensus 223 -------~~~~~~~~~~~~~~~~v~~f~~dm~~~l~~aDl--vI~raG~~Tv~E~~a~G~P~Ilip~p~~~~~~Q~~NA~ 293 (365)
T 3s2u_A 223 -------AEITAERYRTVAVEADVAPFISDMAAAYAWADL--VICRAGALTVSELTAAGLPAFLVPLPHAIDDHQTRNAE 293 (365)
T ss_dssp -------HHHHHHHHHHTTCCCEEESCCSCHHHHHHHCSE--EEECCCHHHHHHHHHHTCCEEECC-----CCHHHHHHH
T ss_pred -------cccccceecccccccccccchhhhhhhhccceE--EEecCCcchHHHHHHhCCCeEEeccCCCCCcHHHHHHH
Confidence 12222221 24577788999875 69999997 99999999999999999999999874 58999999
Q ss_pred HHHHHhcceEEeccCCCCCCCHHHHHHHHHHHhCCcHHHHH
Q 042753 391 LLVDQLGVGIRVGEGTRNIPESDELARLLAQSVDGPRRERL 431 (473)
Q Consensus 391 rv~~~~G~G~~l~~~~~~~~~~~~l~~~i~~~l~~~~~~~~ 431 (473)
.+++. |+|+.+. .++++++.|.++|.++++|+ +.++
T Consensus 294 ~l~~~-G~a~~l~---~~~~~~~~L~~~i~~ll~d~-~~~~ 329 (365)
T 3s2u_A 294 FLVRS-GAGRLLP---QKSTGAAELAAQLSEVLMHP-ETLR 329 (365)
T ss_dssp HHHTT-TSEEECC---TTTCCHHHHHHHHHHHHHCT-HHHH
T ss_pred HHHHC-CCEEEee---cCCCCHHHHHHHHHHHHCCH-HHHH
Confidence 99966 9999999 88899999999999999997 5443
|
| >2o6l_A UDP-glucuronosyltransferase 2B7; drug metabolism, rossman, MAD, enzyme, nucleotide binding, sugar,UDP-glucuronosyltransferase, UGT; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.95 E-value=9.4e-27 Score=202.03 Aligned_cols=164 Identities=24% Similarity=0.332 Sum_probs=139.7
Q ss_pred CCChhhhHHHhcCCCCCcEEEEEeCCcc-cCCHHHHHHHHHHHHhCCCcEEEEEeCCCccCCcccCCCCchhhHHhhcCC
Q 042753 257 SVPAHDVLTWLDSRRDESVVYVCFGSRY-VLTAKQIHELAAALEKTDVDFVYCVREPDERHASQDCGVLPDGFEDRVAGR 335 (473)
Q Consensus 257 ~~~~~~~~~~l~~~~~~~~V~vs~Gs~~-~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~lp~~~~~~~~~~ 335 (473)
+++++++.+|++..+++++|||++||.. ....+.+..+++++++.+.+++|+++... .+.+ ++
T Consensus 5 ~~l~~~~~~~l~~~~~~~~vlv~~Gs~~~~~~~~~~~~~~~al~~~~~~~~~~~g~~~-------~~~~---------~~ 68 (170)
T 2o6l_A 5 KPLPKEMEDFVQSSGENGVVVFSLGSMVSNMTEERANVIASALAQIPQKVLWRFDGNK-------PDTL---------GL 68 (170)
T ss_dssp CCCCHHHHHHHHTTTTTCEEEEECCSCCTTCCHHHHHHHHHHHTTSSSEEEEECCSSC-------CTTC---------CT
T ss_pred CCCCHHHHHHHHcCCCCCEEEEECCCCcccCCHHHHHHHHHHHHhCCCeEEEEECCcC-------cccC---------CC
Confidence 4577899999987567799999999996 45778889999999988999999997642 0122 36
Q ss_pred CeEeecCccHHHhhhccCccceeeccCchhHHHHHhhCCeEecCcccccchhhHHHHHHHhcceEEeccCCCCCCCHHHH
Q 042753 336 GYVIRGWSQQVAILRHKAVGAFLTHCGWNSVLEGVSAGVVMLTWPMDADQYTNAQLLVDQLGVGIRVGEGTRNIPESDEL 415 (473)
Q Consensus 336 nv~v~~~~pq~~lL~~~~v~~~ItHgG~~s~~eal~~GvP~l~~P~~~DQ~~na~rv~~~~G~G~~l~~~~~~~~~~~~l 415 (473)
|+.+.+|+||.++|.|+..++||||||+||+.||+++|+|+|++|...||..||.++++ .|+|+.++ ..+++.++|
T Consensus 69 ~v~~~~~~~~~~~l~~~~ad~~I~~~G~~t~~Ea~~~G~P~i~~p~~~~Q~~na~~l~~-~g~g~~~~---~~~~~~~~l 144 (170)
T 2o6l_A 69 NTRLYKWIPQNDLLGHPKTRAFITHGGANGIYEAIYHGIPMVGIPLFADQPDNIAHMKA-RGAAVRVD---FNTMSSTDL 144 (170)
T ss_dssp TEEEESSCCHHHHHTSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHT-TTSEEECC---TTTCCHHHH
T ss_pred cEEEecCCCHHHHhcCCCcCEEEEcCCccHHHHHHHcCCCEEeccchhhHHHHHHHHHH-cCCeEEec---cccCCHHHH
Confidence 88999999999999555555699999999999999999999999999999999999995 49999998 778999999
Q ss_pred HHHHHHHhCCcHHHHHHHHHHHHHHH
Q 042753 416 ARLLAQSVDGPRRERLKARELSGAAL 441 (473)
Q Consensus 416 ~~~i~~~l~~~~~~~~~a~~~~~~~~ 441 (473)
.++|.++++|+ +|+++|+++++.++
T Consensus 145 ~~~i~~ll~~~-~~~~~a~~~~~~~~ 169 (170)
T 2o6l_A 145 LNALKRVINDP-SYKENVMKLSRIQH 169 (170)
T ss_dssp HHHHHHHHHCH-HHHHHHHHHC----
T ss_pred HHHHHHHHcCH-HHHHHHHHHHHHhh
Confidence 99999999997 99999999998875
|
| >1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A* | Back alignment and structure |
|---|
Probab=99.87 E-value=1.2e-20 Score=184.20 Aligned_cols=343 Identities=18% Similarity=0.134 Sum_probs=209.4
Q ss_pred CCCCc-cEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCCCCh--hhhhhhccCCCCCCeeEEEcCCCCCCCCCChh
Q 042753 1 MLPAG-AHILVYPFPTSGHIIPLLDLTNRLLTLGLNVTVLITQNNL--PLLDSLNANHPSTSLQSLVLPQPKWPAGSPAT 77 (473)
Q Consensus 1 ~~~~~-~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~--~~i~~~~~~~~~~~~~f~~l~~~~~~~~~~~~ 77 (473)
||..| +||++++.+..||..++..|+++|.++||+|++++..... ..+... ++.+..++...........
T Consensus 1 mM~~m~mkIl~~~~~~gG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~~~~-------g~~~~~~~~~~~~~~~~~~ 73 (364)
T 1f0k_A 1 MMSGQGKRLMVMAGGTGGHVFPGLAVAHHLMAQGWQVRWLGTADRMEADLVPKH-------GIEIDFIRISGLRGKGIKA 73 (364)
T ss_dssp ------CEEEEECCSSHHHHHHHHHHHHHHHTTTCEEEEEECTTSTHHHHGGGG-------TCEEEECCCCCCTTCCHHH
T ss_pred CCCCCCcEEEEEeCCCccchhHHHHHHHHHHHcCCEEEEEecCCcchhhhcccc-------CCceEEecCCccCcCccHH
Confidence 66666 8999998777799999999999999999999999987542 222222 6777766643211100001
Q ss_pred hHHHHHHHHHHHhhHHHHHHHhcCCCCCcEEEeCCCcc--hHHHHHHHhCCCcEEEecchHHHHHHHHhhhccCCCCCCC
Q 042753 78 RLLKFMRVLRELHYPALLDWFKSHPSPPVAILSDFFLG--WTQGLAAELGLPRVVFSPSGAFALSVSFAMWTDLPTNDDP 155 (473)
Q Consensus 78 ~~~~~~~~~~~~~~~~l~~~l~~~~~~pD~VV~D~~~~--~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~p~~~~~ 155 (473)
.+...... . .....+.+++++. +||+|+++.... .+..+++..|+|+|.......
T Consensus 74 ~~~~~~~~-~-~~~~~l~~~l~~~--~pDvv~~~~~~~~~~~~~~~~~~~~p~v~~~~~~~------------------- 130 (364)
T 1f0k_A 74 LIAAPLRI-F-NAWRQARAIMKAY--KPDVVLGMGGYVSGPGGLAAWSLGIPVVLHEQNGI------------------- 130 (364)
T ss_dssp HHTCHHHH-H-HHHHHHHHHHHHH--CCSEEEECSSTTHHHHHHHHHHTTCCEEEEECSSS-------------------
T ss_pred HHHHHHHH-H-HHHHHHHHHHHhc--CCCEEEEeCCcCchHHHHHHHHcCCCEEEEecCCC-------------------
Confidence 11001111 1 2234567788888 999999986542 456778889999886422100
Q ss_pred CCCCccccCCCCCCCCCCCccccchhhhccCCCCCchHHHHHHhhhccCCcEEeecchHHhhHHHHHHHHHhhCCCcEEE
Q 042753 156 DNVDALVSFPRVPNCPVYPWYQISHLYRTLKEGDPDWDLHRSNMMANKTSWGIVFNSFAELERVYIDHMKKEMGHDRVWA 235 (473)
Q Consensus 156 ~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~le~~~~~~~~~~~~~~~~~~ 235 (473)
++ . ..+. .....+.++..+ .+. + +++..
T Consensus 131 ---------~~--------------~---------~~~~------~~~~~d~v~~~~-~~~-----------~--~~~~~ 158 (364)
T 1f0k_A 131 ---------AG--------------L---------TNKW------LAKIATKVMQAF-PGA-----------F--PNAEV 158 (364)
T ss_dssp ---------CC--------------H---------HHHH------HTTTCSEEEESS-TTS-----------S--SSCEE
T ss_pred ---------Cc--------------H---------HHHH------HHHhCCEEEecC-hhh-----------c--CCceE
Confidence 00 0 0000 001122223222 111 1 24455
Q ss_pred eccCCCCCCcchhhccCCCCCCCChhhhHHHhcCCCCCcEEEEEeCCcccCCHHHHHHHHHHHHhC--CCcEEEEEeCCC
Q 042753 236 VGPVLPPDDDLVESMCRGGSSSVPAHDVLTWLDSRRDESVVYVCFGSRYVLTAKQIHELAAALEKT--DVDFVYCVREPD 313 (473)
Q Consensus 236 vGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~V~vs~Gs~~~~~~~~~~~~~~al~~~--~~~~i~~~~~~~ 313 (473)
+|.-+... . . . .+. ..+.+....++++|++..|+... ......++++++.. +.++++.++...
T Consensus 159 i~n~v~~~-~-----~-----~-~~~-~~~~~~~~~~~~~il~~~g~~~~--~k~~~~li~a~~~l~~~~~~l~i~G~~~ 223 (364)
T 1f0k_A 159 VGNPVRTD-V-----L-----A-LPL-PQQRLAGREGPVRVLVVGGSQGA--RILNQTMPQVAAKLGDSVTIWHQSGKGS 223 (364)
T ss_dssp CCCCCCHH-H-----H-----T-SCC-HHHHHTTCCSSEEEEEECTTTCC--HHHHHHHHHHHHHHGGGEEEEEECCTTC
T ss_pred eCCccchh-h-----c-----c-cch-hhhhcccCCCCcEEEEEcCchHh--HHHHHHHHHHHHHhcCCcEEEEEcCCch
Confidence 55432221 1 0 0 001 11222222356778888888753 33444455666543 456667676641
Q ss_pred ccCCcccCCCCchhhHHhh---cCCCeEeecCcc-HHHhhhccCccceeeccCchhHHHHHhhCCeEecCccc---ccch
Q 042753 314 ERHASQDCGVLPDGFEDRV---AGRGYVIRGWSQ-QVAILRHKAVGAFLTHCGWNSVLEGVSAGVVMLTWPMD---ADQY 386 (473)
Q Consensus 314 ~~~~~~~~~~lp~~~~~~~---~~~nv~v~~~~p-q~~lL~~~~v~~~ItHgG~~s~~eal~~GvP~l~~P~~---~DQ~ 386 (473)
.+.+.+.. ..+++.+.+|++ -.++++.+++ +|+++|.+++.||+++|+|+|+.|.. .||.
T Consensus 224 -----------~~~l~~~~~~~~~~~v~~~g~~~~~~~~~~~ad~--~v~~sg~~~~~EAma~G~Pvi~~~~~g~~~~q~ 290 (364)
T 1f0k_A 224 -----------QQSVEQAYAEAGQPQHKVTEFIDDMAAAYAWADV--VVCRSGALTVSEIAAAGLPALFVPFQHKDRQQY 290 (364)
T ss_dssp -----------HHHHHHHHHHTTCTTSEEESCCSCHHHHHHHCSE--EEECCCHHHHHHHHHHTCCEEECCCCCTTCHHH
T ss_pred -----------HHHHHHHHhhcCCCceEEecchhhHHHHHHhCCE--EEECCchHHHHHHHHhCCCEEEeeCCCCchhHH
Confidence 12333222 225788889994 4679999997 99999999999999999999999988 7999
Q ss_pred hhHHHHHHHhcceEEeccCCCCCCCHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHhh
Q 042753 387 TNAQLLVDQLGVGIRVGEGTRNIPESDELARLLAQSVDGPRRERLKARELSGAALSAVVKGGSSDRDLNDFIKRINEL 464 (473)
Q Consensus 387 ~na~rv~~~~G~G~~l~~~~~~~~~~~~l~~~i~~~l~~~~~~~~~a~~~~~~~~~~~~~~gs~~~~~~~~~~~~~~~ 464 (473)
.|+..+.+. |.|..++ ..+++.++|.++|.++ |+ ..+++..+-+... ....+.++.++.+++.+++.
T Consensus 291 ~~~~~~~~~-g~g~~~~---~~d~~~~~la~~i~~l--~~-~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~y~~~ 357 (364)
T 1f0k_A 291 WNALPLEKA-GAAKIIE---QPQLSVDAVANTLAGW--SR-ETLLTMAERARAA----SIPDATERVANEVSRVARAL 357 (364)
T ss_dssp HHHHHHHHT-TSEEECC---GGGCCHHHHHHHHHTC--CH-HHHHHHHHHHHHT----CCTTHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHhC-CcEEEec---cccCCHHHHHHHHHhc--CH-HHHHHHHHHHHHh----hccCHHHHHHHHHHHHHHHH
Confidence 999999955 9999888 6667799999999998 65 6655554444333 23566777777777776664
|
| >2jzc_A UDP-N-acetylglucosamine transferase subunit ALG13; rossmann-like fold, endoplasmic reticulum, glycosyltransferase, structural genomics; NMR {Saccharomyces cerevisiae} PDB: 2ks6_A | Back alignment and structure |
|---|
Probab=99.61 E-value=1.4e-15 Score=135.07 Aligned_cols=132 Identities=14% Similarity=0.163 Sum_probs=96.4
Q ss_pred CCCcEEEEEeCCcccCCHHHHHH-----HHHHHHhCC-CcEEEEEeCCCccCCcccCCCCchhhHHhh------------
Q 042753 271 RDESVVYVCFGSRYVLTAKQIHE-----LAAALEKTD-VDFVYCVREPDERHASQDCGVLPDGFEDRV------------ 332 (473)
Q Consensus 271 ~~~~~V~vs~Gs~~~~~~~~~~~-----~~~al~~~~-~~~i~~~~~~~~~~~~~~~~~lp~~~~~~~------------ 332 (473)
.++++|||+.||... -.+.+.. ++++|.+.+ .+++++++... ....+.+.++.
T Consensus 26 ~~~~~VlVtgGS~~~-~n~li~~vl~~~~l~~L~~~~~~~vv~q~G~~~--------~~~~~~~~~~~~~~~~~~l~p~~ 96 (224)
T 2jzc_A 26 IEEKALFVTCGATVP-FPKLVSCVLSDEFCQELIQYGFVRLIIQFGRNY--------SSEFEHLVQERGGQRESQKIPID 96 (224)
T ss_dssp CCSCCEEEECCSCCS-CHHHHHHHTSHHHHHHHHTTTCCCEEECCCSSS--------CCCCCSHHHHHTCEECSCCCSSC
T ss_pred CCCCEEEEEcCCchH-HHHHHHHHHHHHHHHHHhcCCCeEEEEEECCCc--------hhhHHHHHHhhhccccccccccc
Confidence 468999999999842 2343433 348888877 79999999863 10111111111
Q ss_pred ---------------cCCCeEeecCccHH-Hhhh-ccCccceeeccCchhHHHHHhhCCeEecCccc----ccchhhHHH
Q 042753 333 ---------------AGRGYVIRGWSQQV-AILR-HKAVGAFLTHCGWNSVLEGVSAGVVMLTWPMD----ADQYTNAQL 391 (473)
Q Consensus 333 ---------------~~~nv~v~~~~pq~-~lL~-~~~v~~~ItHgG~~s~~eal~~GvP~l~~P~~----~DQ~~na~r 391 (473)
..-++.+.+|+++. ++|+ .+++ +|||||+||+.|++++|+|+|++|.. .||..||++
T Consensus 97 ~~~~~~~~~~~~~~~~~~~v~v~~f~~~m~~~l~~~Adl--vIshaGagTv~Eal~~G~P~IvVP~~~~~~~HQ~~nA~~ 174 (224)
T 2jzc_A 97 QFGCGDTARQYVLMNGKLKVIGFDFSTKMQSIIRDYSDL--VISHAGTGSILDSLRLNKPLIVCVNDSLMDNHQQQIADK 174 (224)
T ss_dssp TTCTTCSCEEEESTTTSSEEEECCSSSSHHHHHHHHCSC--EEESSCHHHHHHHHHTTCCCCEECCSSCCCCHHHHHHHH
T ss_pred cccccccccccccccCCceEEEeeccchHHHHHHhcCCE--EEECCcHHHHHHHHHhCCCEEEEcCcccccchHHHHHHH
Confidence 01245677888876 7899 9998 99999999999999999999999984 479999999
Q ss_pred HHHHhcceEEeccCCCCCCCHHHHHHHHHHH
Q 042753 392 LVDQLGVGIRVGEGTRNIPESDELARLLAQS 422 (473)
Q Consensus 392 v~~~~G~G~~l~~~~~~~~~~~~l~~~i~~~ 422 (473)
+++. |+|+.++ .+.|.++|+++
T Consensus 175 l~~~-G~~~~~~--------~~~L~~~i~~l 196 (224)
T 2jzc_A 175 FVEL-GYVWSCA--------PTETGLIAGLR 196 (224)
T ss_dssp HHHH-SCCCEEC--------SCTTTHHHHHH
T ss_pred HHHC-CCEEEcC--------HHHHHHHHHHH
Confidence 9955 9987664 45566677766
|
| >3hbm_A UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter jejuni subsp} PDB: 3hbn_A* | Back alignment and structure |
|---|
Probab=99.61 E-value=1.9e-14 Score=133.23 Aligned_cols=116 Identities=10% Similarity=0.114 Sum_probs=90.0
Q ss_pred CCcEEEEEeCCcccCCHHHHHHHHHHHHhCCCcEEEEEeCCCccCCcccCCCCchhhHHhhc-CCCeEeecCccHH-Hhh
Q 042753 272 DESVVYVCFGSRYVLTAKQIHELAAALEKTDVDFVYCVREPDERHASQDCGVLPDGFEDRVA-GRGYVIRGWSQQV-AIL 349 (473)
Q Consensus 272 ~~~~V~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~lp~~~~~~~~-~~nv~v~~~~pq~-~lL 349 (473)
..+.|+|++|+... ......++++|.+.. ++.++++.+. ...+.+.+... .+|+.+..|+++. ++|
T Consensus 156 ~~~~ILv~~GG~d~--~~l~~~vl~~L~~~~-~i~vv~G~~~---------~~~~~l~~~~~~~~~v~v~~~~~~m~~~m 223 (282)
T 3hbm_A 156 KKYDFFICMGGTDI--KNLSLQIASELPKTK-IISIATSSSN---------PNLKKLQKFAKLHNNIRLFIDHENIAKLM 223 (282)
T ss_dssp CCEEEEEECCSCCT--TCHHHHHHHHSCTTS-CEEEEECTTC---------TTHHHHHHHHHTCSSEEEEESCSCHHHHH
T ss_pred cCCeEEEEECCCch--hhHHHHHHHHhhcCC-CEEEEECCCc---------hHHHHHHHHHhhCCCEEEEeCHHHHHHHH
Confidence 45689999998643 335566788886654 5777776652 22233433222 3589999999876 589
Q ss_pred hccCccceeeccCchhHHHHHhhCCeEecCcccccchhhHHHHHHHhcceEEec
Q 042753 350 RHKAVGAFLTHCGWNSVLEGVSAGVVMLTWPMDADQYTNAQLLVDQLGVGIRVG 403 (473)
Q Consensus 350 ~~~~v~~~ItHgG~~s~~eal~~GvP~l~~P~~~DQ~~na~rv~~~~G~G~~l~ 403 (473)
..+++ +|++|| +|+.|+++.|+|+|++|...+|..||+.+++. |+++.+.
T Consensus 224 ~~aDl--vI~~gG-~T~~E~~~~g~P~i~ip~~~~Q~~nA~~l~~~-G~~~~~~ 273 (282)
T 3hbm_A 224 NESNK--LIISAS-SLVNEALLLKANFKAICYVKNQESTATWLAKK-GYEVEYK 273 (282)
T ss_dssp HTEEE--EEEESS-HHHHHHHHTTCCEEEECCSGGGHHHHHHHHHT-TCEEECG
T ss_pred HHCCE--EEECCc-HHHHHHHHcCCCEEEEeCCCCHHHHHHHHHHC-CCEEEcc
Confidence 99997 999999 89999999999999999999999999999955 9999887
|
| >1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3 | Back alignment and structure |
|---|
Probab=99.45 E-value=5.6e-13 Score=130.24 Aligned_cols=159 Identities=19% Similarity=0.246 Sum_probs=96.7
Q ss_pred CCcEEEEEeCCcccCCHHHHHHHHHHHHh-----CCCcEEEEEeCCCccCCcccCCCCchhhHHhhc-CCCeEeecCccH
Q 042753 272 DESVVYVCFGSRYVLTAKQIHELAAALEK-----TDVDFVYCVREPDERHASQDCGVLPDGFEDRVA-GRGYVIRGWSQQ 345 (473)
Q Consensus 272 ~~~~V~vs~Gs~~~~~~~~~~~~~~al~~-----~~~~~i~~~~~~~~~~~~~~~~~lp~~~~~~~~-~~nv~v~~~~pq 345 (473)
++++|+++.|...... .+..+++++++ .+.++++..+.+ ..+-+.+.+... .+++.+.+++++
T Consensus 197 ~~~~vl~~~gr~~~~k--~~~~ll~a~~~l~~~~~~~~lv~~~g~~---------~~~~~~l~~~~~~~~~v~~~g~~g~ 265 (376)
T 1v4v_A 197 EGPYVTVTMHRRENWP--LLSDLAQALKRVAEAFPHLTFVYPVHLN---------PVVREAVFPVLKGVRNFVLLDPLEY 265 (376)
T ss_dssp SSCEEEECCCCGGGGG--GHHHHHHHHHHHHHHCTTSEEEEECCSC---------HHHHHHHHHHHTTCTTEEEECCCCH
T ss_pred CCCEEEEEeCcccchH--HHHHHHHHHHHHHhhCCCeEEEEECCCC---------HHHHHHHHHHhccCCCEEEECCCCH
Confidence 4567888888654322 23445555543 245555544532 101123333222 357888866554
Q ss_pred ---HHhhhccCccceeeccCchhHHHHHhhCCeEecCcccccchhhHHHHHHHhcceEEeccCCCCCCCHHHHHHHHHHH
Q 042753 346 ---VAILRHKAVGAFLTHCGWNSVLEGVSAGVVMLTWPMDADQYTNAQLLVDQLGVGIRVGEGTRNIPESDELARLLAQS 422 (473)
Q Consensus 346 ---~~lL~~~~v~~~ItHgG~~s~~eal~~GvP~l~~P~~~DQ~~na~rv~~~~G~G~~l~~~~~~~~~~~~l~~~i~~~ 422 (473)
.++++.+++ ||+.+| |.+.||+++|+|+|+.+...++... .+. |.|+.+. .+.++|.++|.++
T Consensus 266 ~~~~~~~~~ad~--~v~~S~-g~~lEA~a~G~PvI~~~~~~~~~~~----~~~-g~g~lv~------~d~~~la~~i~~l 331 (376)
T 1v4v_A 266 GSMAALMRASLL--LVTDSG-GLQEEGAALGVPVVVLRNVTERPEG----LKA-GILKLAG------TDPEGVYRVVKGL 331 (376)
T ss_dssp HHHHHHHHTEEE--EEESCH-HHHHHHHHTTCCEEECSSSCSCHHH----HHH-TSEEECC------SCHHHHHHHHHHH
T ss_pred HHHHHHHHhCcE--EEECCc-CHHHHHHHcCCCEEeccCCCcchhh----hcC-CceEECC------CCHHHHHHHHHHH
Confidence 578999997 898884 4466999999999998766666663 335 8887764 3899999999999
Q ss_pred hCCcHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHH
Q 042753 423 VDGPRRERLKARELSGAALSAVVKGGSSDRDLNDFIKR 460 (473)
Q Consensus 423 l~~~~~~~~~a~~~~~~~~~~~~~~gs~~~~~~~~~~~ 460 (473)
++|+ ..+++..+.+..+ ..++++++.++.+.+.
T Consensus 332 l~d~-~~~~~~~~~~~~~----~~~~~~~~i~~~i~~~ 364 (376)
T 1v4v_A 332 LENP-EELSRMRKAKNPY----GDGKAGLMVARGVAWR 364 (376)
T ss_dssp HTCH-HHHHHHHHSCCSS----CCSCHHHHHHHHHHHH
T ss_pred HhCh-HhhhhhcccCCCC----CCChHHHHHHHHHHHH
Confidence 9986 5554443321111 2344455555444443
|
| >3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A* | Back alignment and structure |
|---|
Probab=99.42 E-value=3e-10 Score=111.23 Aligned_cols=352 Identities=13% Similarity=0.065 Sum_probs=194.6
Q ss_pred CccEEEEEcC--C--CCCChHHHHHHHHHHHhCCCeEEEEeCCCChhhhhhhccCCCCCCeeEEEcCCCCCCCCCChhhH
Q 042753 4 AGAHILVYPF--P--TSGHIIPLLDLTNRLLTLGLNVTVLITQNNLPLLDSLNANHPSTSLQSLVLPQPKWPAGSPATRL 79 (473)
Q Consensus 4 ~~~~Il~~~~--~--~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~i~~~~~~~~~~~~~f~~l~~~~~~~~~~~~~~ 79 (473)
.|+||++++. + ..|.-..+..+++.| +||+|++++............. ..++.+..++... .++..
T Consensus 3 ~~mkIl~v~~~~~p~~gG~~~~~~~l~~~L--~g~~v~v~~~~~~~~~~~~~~~---~~~~~~~~~~~~~--~~~~~--- 72 (394)
T 3okp_A 3 ASRKTLVVTNDFPPRIGGIQSYLRDFIATQ--DPESIVVFASTQNAEEAHAYDK---TLDYEVIRWPRSV--MLPTP--- 72 (394)
T ss_dssp -CCCEEEEESCCTTSCSHHHHHHHHHHTTS--CGGGEEEEEECSSHHHHHHHHT---TCSSEEEEESSSS--CCSCH---
T ss_pred CCceEEEEeCccCCccchHHHHHHHHHHHh--cCCeEEEEECCCCccchhhhcc---ccceEEEEccccc--cccch---
Confidence 4678987763 3 357788889999999 6999999998866432111110 1357777666321 11100
Q ss_pred HHHHHHHHHHhhHHHHHHHhcCCCCCcEEEeCCCcc--hHHHHHHHhCCCcEEEecchHHHHHHHHhhhccCCCCCCCCC
Q 042753 80 LKFMRVLRELHYPALLDWFKSHPSPPVAILSDFFLG--WTQGLAAELGLPRVVFSPSGAFALSVSFAMWTDLPTNDDPDN 157 (473)
Q Consensus 80 ~~~~~~~~~~~~~~l~~~l~~~~~~pD~VV~D~~~~--~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 157 (473)
.....+.+++++. +||+|++..... ....+++.+++|.+.++....... .
T Consensus 73 ---------~~~~~l~~~~~~~--~~Dvv~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~-~---------------- 124 (394)
T 3okp_A 73 ---------TTAHAMAEIIRER--EIDNVWFGAAAPLALMAGTAKQAGASKVIASTHGHEVG-W---------------- 124 (394)
T ss_dssp ---------HHHHHHHHHHHHT--TCSEEEESSCTTGGGGHHHHHHTTCSEEEEECCSTHHH-H----------------
T ss_pred ---------hhHHHHHHHHHhc--CCCEEEECCcchHHHHHHHHHhcCCCcEEEEeccchhh-h----------------
Confidence 2234567788888 999999865544 455678889999555433321100 0
Q ss_pred CCccccCCCCCCCCCCCccccchhhhccCCCCCchHHHHHHhhhccCCcEEeecchHHhhHHHHHHHHHhhC-CCcEEEe
Q 042753 158 VDALVSFPRVPNCPVYPWYQISHLYRTLKEGDPDWDLHRSNMMANKTSWGIVFNSFAELERVYIDHMKKEMG-HDRVWAV 236 (473)
Q Consensus 158 ~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~le~~~~~~~~~~~~-~~~~~~v 236 (473)
. . ........ .......+.++..|-...+ .+....+ ..++..+
T Consensus 125 ---------------~-~------------~~~~~~~~---~~~~~~~d~ii~~s~~~~~-----~~~~~~~~~~~~~vi 168 (394)
T 3okp_A 125 ---------------S-M------------LPGSRQSL---RKIGTEVDVLTYISQYTLR-----RFKSAFGSHPTFEHL 168 (394)
T ss_dssp ---------------T-T------------SHHHHHHH---HHHHHHCSEEEESCHHHHH-----HHHHHHCSSSEEEEC
T ss_pred ---------------h-h------------cchhhHHH---HHHHHhCCEEEEcCHHHHH-----HHHHhcCCCCCeEEe
Confidence 0 0 00001111 1123445566665532222 2222221 0356666
Q ss_pred ccCCCCCCcchhhccCCCCCCCChhhhHHHhcCCCCCcEEEEEeCCccc-CCHHHHHHHHHHHHh--CCCcEEEEEeCCC
Q 042753 237 GPVLPPDDDLVESMCRGGSSSVPAHDVLTWLDSRRDESVVYVCFGSRYV-LTAKQIHELAAALEK--TDVDFVYCVREPD 313 (473)
Q Consensus 237 Gpl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~V~vs~Gs~~~-~~~~~~~~~~~al~~--~~~~~i~~~~~~~ 313 (473)
..-+... . ... ........+.+.+.- .++..+++..|+... ...+.+-+.+..+.+ .+.++++ ++...
T Consensus 169 ~ngv~~~-~----~~~--~~~~~~~~~~~~~~~-~~~~~~i~~~G~~~~~Kg~~~li~a~~~l~~~~~~~~l~i-~G~g~ 239 (394)
T 3okp_A 169 PSGVDVK-R----FTP--ATPEDKSATRKKLGF-TDTTPVIACNSRLVPRKGQDSLIKAMPQVIAARPDAQLLI-VGSGR 239 (394)
T ss_dssp CCCBCTT-T----SCC--CCHHHHHHHHHHTTC-CTTCCEEEEESCSCGGGCHHHHHHHHHHHHHHSTTCEEEE-ECCCT
T ss_pred cCCcCHH-H----cCC--CCchhhHHHHHhcCC-CcCceEEEEEeccccccCHHHHHHHHHHHHhhCCCeEEEE-EcCch
Confidence 6433332 1 000 000011233333433 344467778888743 234444444444433 2445444 34321
Q ss_pred ccCCcccCCCCchhhHHhh--cCCCeEeecCccHHH---hhhccCccceee-----------ccCchhHHHHHhhCCeEe
Q 042753 314 ERHASQDCGVLPDGFEDRV--AGRGYVIRGWSQQVA---ILRHKAVGAFLT-----------HCGWNSVLEGVSAGVVML 377 (473)
Q Consensus 314 ~~~~~~~~~~lp~~~~~~~--~~~nv~v~~~~pq~~---lL~~~~v~~~It-----------HgG~~s~~eal~~GvP~l 377 (473)
..+.+.+.. ..+++.+.+|+|+.+ ++..+++ +|. -|..+++.||+++|+|+|
T Consensus 240 ----------~~~~l~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad~--~v~ps~~~~~~~~~e~~~~~~~Ea~a~G~PvI 307 (394)
T 3okp_A 240 ----------YESTLRRLATDVSQNVKFLGRLEYQDMINTLAAADI--FAMPARTRGGGLDVEGLGIVYLEAQACGVPVI 307 (394)
T ss_dssp ----------THHHHHHHTGGGGGGEEEEESCCHHHHHHHHHHCSE--EEECCCCBGGGTBCCSSCHHHHHHHHTTCCEE
T ss_pred ----------HHHHHHHHHhcccCeEEEcCCCCHHHHHHHHHhCCE--EEecCccccccccccccCcHHHHHHHcCCCEE
Confidence 112333222 136888999997655 6788887 665 566779999999999999
Q ss_pred cCcccccchhhHHHHHHHhcceEEeccCCCCCCCHHHHHHHHHHHhCCcHHHHHHH-HHHHHHHHHHHhcCCChHHHHHH
Q 042753 378 TWPMDADQYTNAQLLVDQLGVGIRVGEGTRNIPESDELARLLAQSVDGPRRERLKA-RELSGAALSAVVKGGSSDRDLND 456 (473)
Q Consensus 378 ~~P~~~DQ~~na~rv~~~~G~G~~l~~~~~~~~~~~~l~~~i~~~l~~~~~~~~~a-~~~~~~~~~~~~~~gs~~~~~~~ 456 (473)
+.+..+ ....+. . |.|..++ .-+.+++.++|.++++|+ ..+++. +.-++.+ ...-+.+..+++
T Consensus 308 ~~~~~~----~~e~i~-~-~~g~~~~-----~~d~~~l~~~i~~l~~~~-~~~~~~~~~~~~~~----~~~~s~~~~~~~ 371 (394)
T 3okp_A 308 AGTSGG----APETVT-P-ATGLVVE-----GSDVDKLSELLIELLDDP-IRRAAMGAAGRAHV----EAEWSWEIMGER 371 (394)
T ss_dssp ECSSTT----GGGGCC-T-TTEEECC-----TTCHHHHHHHHHHHHTCH-HHHHHHHHHHHHHH----HHHTBHHHHHHH
T ss_pred EeCCCC----hHHHHh-c-CCceEeC-----CCCHHHHHHHHHHHHhCH-HHHHHHHHHHHHHH----HHhCCHHHHHHH
Confidence 976532 223333 4 5777776 347999999999999987 433222 2222222 223467888888
Q ss_pred HHHHHHhhcc
Q 042753 457 FIKRINELKS 466 (473)
Q Consensus 457 ~~~~~~~~~~ 466 (473)
+++.+++...
T Consensus 372 ~~~~~~~~~r 381 (394)
T 3okp_A 372 LTNILQSEPR 381 (394)
T ss_dssp HHHHHHSCCC
T ss_pred HHHHHHHhcc
Confidence 8888888743
|
| >3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A* | Back alignment and structure |
|---|
Probab=99.40 E-value=3e-10 Score=113.07 Aligned_cols=372 Identities=13% Similarity=0.081 Sum_probs=188.1
Q ss_pred CccEEEEEcC---C--------CCCChHHHHHHHHHHHhCCCeEEEEeCCCChhh--hhhhccCCCCCCeeEEEcCCCCC
Q 042753 4 AGAHILVYPF---P--------TSGHIIPLLDLTNRLLTLGLNVTVLITQNNLPL--LDSLNANHPSTSLQSLVLPQPKW 70 (473)
Q Consensus 4 ~~~~Il~~~~---~--------~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~--i~~~~~~~~~~~~~f~~l~~~~~ 70 (473)
.|+||++++. | ..|+-.....|++.|.++||+|++++....... .... ..++.+..++....
T Consensus 19 ~mmkIl~i~~~~~p~~~~~~~~~GG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~~~~-----~~~v~v~~~~~~~~ 93 (438)
T 3c48_A 19 SHMRVAMISMHTSPLQQPGTGDSGGMNVYILSTATELAKQGIEVDIYTRATRPSQGEIVRV-----AENLRVINIAAGPY 93 (438)
T ss_dssp CCCEEEEECTTSCTTCC-------CHHHHHHHHHHHHHHTTCEEEEEEECCCGGGCSEEEE-----ETTEEEEEECCSCS
T ss_pred chheeeeEEeeccccccCCCCCCCCHHHHHHHHHHHHHhcCCEEEEEecCCCCCCcccccc-----cCCeEEEEecCCCc
Confidence 4899998884 2 357888899999999999999999997653221 1111 13677776664322
Q ss_pred CCCCChhhHHHHHHHHHHHhhHHHHHH-HhcCCCCCcEEEeCCCcc--hHHHHHHHhCCCcEEEecchHHHHHHHHhhhc
Q 042753 71 PAGSPATRLLKFMRVLRELHYPALLDW-FKSHPSPPVAILSDFFLG--WTQGLAAELGLPRVVFSPSGAFALSVSFAMWT 147 (473)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~l~~~-l~~~~~~pD~VV~D~~~~--~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~ 147 (473)
......... .. +. .+...+.+. ++... +||+|++..... .+..+++.+++|+|..........
T Consensus 94 ~~~~~~~~~-~~---~~-~~~~~~~~~~~~~~~-~~Div~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~-------- 159 (438)
T 3c48_A 94 EGLSKEELP-TQ---LA-AFTGGMLSFTRREKV-TYDLIHSHYWLSGQVGWLLRDLWRIPLIHTAHTLAAVK-------- 159 (438)
T ss_dssp SSCCGGGGG-GG---HH-HHHHHHHHHHHHHTC-CCSEEEEEHHHHHHHHHHHHHHHTCCEEEECSSCHHHH--------
T ss_pred cccchhHHH-HH---HH-HHHHHHHHHHHhccC-CCCEEEeCCccHHHHHHHHHHHcCCCEEEEecCCcccc--------
Confidence 122211111 11 11 111222222 44441 499999875322 334567788999987654432110
Q ss_pred cCCCCCCCCCCCccccCCCCCCCCCCCccccchhhhccCCCCCchHHHHHHhhhccCCcEEeecchHHhhHHHHHHHHHh
Q 042753 148 DLPTNDDPDNVDALVSFPRVPNCPVYPWYQISHLYRTLKEGDPDWDLHRSNMMANKTSWGIVFNSFAELERVYIDHMKKE 227 (473)
Q Consensus 148 ~~p~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~le~~~~~~~~~~ 227 (473)
...+.. ....... ....+ ........+.++..|-...+ .+...
T Consensus 160 ----------------~~~~~~------~~~~~~~--------~~~~~--~~~~~~~~d~ii~~s~~~~~-----~~~~~ 202 (438)
T 3c48_A 160 ----------------NSYRDD------SDTPESE--------ARRIC--EQQLVDNADVLAVNTQEEMQ-----DLMHH 202 (438)
T ss_dssp ----------------SCC----------CCHHHH--------HHHHH--HHHHHHHCSEEEESSHHHHH-----HHHHH
T ss_pred ----------------cccccc------cCCcchH--------HHHHH--HHHHHhcCCEEEEcCHHHHH-----HHHHH
Confidence 000000 0000000 00001 11233445666666633222 12221
Q ss_pred h--CCCcEEEeccCCCCCCcchhhccCCCCCCCChhhhHHHhcCCCCCcEEEEEeCCccc-CCHHHHHHHHHHHHh-C-C
Q 042753 228 M--GHDRVWAVGPVLPPDDDLVESMCRGGSSSVPAHDVLTWLDSRRDESVVYVCFGSRYV-LTAKQIHELAAALEK-T-D 302 (473)
Q Consensus 228 ~--~~~~~~~vGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~V~vs~Gs~~~-~~~~~~~~~~~al~~-~-~ 302 (473)
+ +..++..+..-+... . .... .....+.+.+.+.- .....+++..|+... ...+.+-..+..+.+ . +
T Consensus 203 ~g~~~~k~~vi~ngvd~~-~----~~~~--~~~~~~~~r~~~~~-~~~~~~i~~~G~~~~~Kg~~~li~a~~~l~~~~p~ 274 (438)
T 3c48_A 203 YDADPDRISVVSPGADVE-L----YSPG--NDRATERSRRELGI-PLHTKVVAFVGRLQPFKGPQVLIKAVAALFDRDPD 274 (438)
T ss_dssp HCCCGGGEEECCCCCCTT-T----SCCC------CHHHHHHTTC-CSSSEEEEEESCBSGGGCHHHHHHHHHHHHHHCTT
T ss_pred hCCChhheEEecCCcccc-c----cCCc--ccchhhhhHHhcCC-CCCCcEEEEEeeecccCCHHHHHHHHHHHHhhCCC
Confidence 2 103566666444332 1 0000 00011113333432 234567777888753 233444444444432 2 1
Q ss_pred CcE-EEEEeCCCccCCcccCCCCchhhHHhh----cCCCeEeecCccHH---HhhhccCccceeec----cCchhHHHHH
Q 042753 303 VDF-VYCVREPDERHASQDCGVLPDGFEDRV----AGRGYVIRGWSQQV---AILRHKAVGAFLTH----CGWNSVLEGV 370 (473)
Q Consensus 303 ~~~-i~~~~~~~~~~~~~~~~~lp~~~~~~~----~~~nv~v~~~~pq~---~lL~~~~v~~~ItH----gG~~s~~eal 370 (473)
..+ ++.++... . .+...+.+.+.. ..+++.+.+|+|+. +++..+++ +|.- |..+++.||+
T Consensus 275 ~~~~l~i~G~~~----~--~g~~~~~l~~~~~~~~l~~~v~~~g~~~~~~~~~~~~~adv--~v~ps~~e~~~~~~~Eam 346 (438)
T 3c48_A 275 RNLRVIICGGPS----G--PNATPDTYRHMAEELGVEKRIRFLDPRPPSELVAVYRAADI--VAVPSFNESFGLVAMEAQ 346 (438)
T ss_dssp CSEEEEEECCBC------------CHHHHHHHHTTCTTTEEEECCCCHHHHHHHHHHCSE--EEECCSCCSSCHHHHHHH
T ss_pred cceEEEEEeCCC----C--CCcHHHHHHHHHHHcCCCCcEEEcCCCChHHHHHHHHhCCE--EEECccccCCchHHHHHH
Confidence 222 33344310 0 001112232222 24679999999864 57888997 6543 3356899999
Q ss_pred hhCCeEecCcccccchhhHHHHHHHhcceEEeccCCCCCCCHHHHHHHHHHHhCCc---HHHHHHHHHHHHHHHHHHhcC
Q 042753 371 SAGVVMLTWPMDADQYTNAQLLVDQLGVGIRVGEGTRNIPESDELARLLAQSVDGP---RRERLKARELSGAALSAVVKG 447 (473)
Q Consensus 371 ~~GvP~l~~P~~~DQ~~na~rv~~~~G~G~~l~~~~~~~~~~~~l~~~i~~~l~~~---~~~~~~a~~~~~~~~~~~~~~ 447 (473)
++|+|+|+.+. ......+.+. +.|..++ .-+.+++.++|.++++|+ ..+.+++++....
T Consensus 347 a~G~PvI~~~~----~~~~e~i~~~-~~g~~~~-----~~d~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~-------- 408 (438)
T 3c48_A 347 ASGTPVIAARV----GGLPIAVAEG-ETGLLVD-----GHSPHAWADALATLLDDDETRIRMGEDAVEHART-------- 408 (438)
T ss_dssp HTTCCEEEESC----TTHHHHSCBT-TTEEEES-----SCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH--------
T ss_pred HcCCCEEecCC----CChhHHhhCC-CcEEECC-----CCCHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHh--------
Confidence 99999999753 3444555423 5788776 347899999999999987 2333444443333
Q ss_pred CChHHHHHHHHHHHHhhc
Q 042753 448 GSSDRDLNDFIKRINELK 465 (473)
Q Consensus 448 gs~~~~~~~~~~~~~~~~ 465 (473)
-+.+..++++++.+++..
T Consensus 409 ~s~~~~~~~~~~~~~~~~ 426 (438)
T 3c48_A 409 FSWAATAAQLSSLYNDAI 426 (438)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHh
Confidence 234555566666655553
|
| >3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=99.38 E-value=1.6e-12 Score=127.77 Aligned_cols=334 Identities=14% Similarity=0.070 Sum_probs=170.0
Q ss_pred ccEEEEEcCCCCCChHHHHHHHHHHHhC-CCeEEEEeCCCChhhhhhhccCCCCCCeeE-EEcCCCCCCCCCChhhHHHH
Q 042753 5 GAHILVYPFPTSGHIIPLLDLTNRLLTL-GLNVTVLITQNNLPLLDSLNANHPSTSLQS-LVLPQPKWPAGSPATRLLKF 82 (473)
Q Consensus 5 ~~~Il~~~~~~~GH~~p~l~La~~L~~r-Gh~Vt~~~~~~~~~~i~~~~~~~~~~~~~f-~~l~~~~~~~~~~~~~~~~~ 82 (473)
|+||++++ ++.....=+.+|.++|.++ |+++.++.+....+....... ..++.. ..+.. ........
T Consensus 25 m~ki~~v~-Gtr~~~~~~a~li~~l~~~~~~~~~~~~tG~h~~~~~~~~~---~~~i~~~~~l~~-----~~~~~~~~-- 93 (396)
T 3dzc_A 25 MKKVLIVF-GTRPEAIKMAPLVQQLCQDNRFVAKVCVTGQHREMLDQVLE---LFSITPDFDLNI-----MEPGQTLN-- 93 (396)
T ss_dssp CEEEEEEE-CSHHHHHHHHHHHHHHHHCTTEEEEEEECCSSSHHHHHHHH---HTTCCCSEECCC-----CCTTCCHH--
T ss_pred CCeEEEEE-eccHhHHHHHHHHHHHHhCCCCcEEEEEecccHHHHHHHHH---hcCCCCceeeec-----CCCCCCHH--
Confidence 68887776 4555666678899999997 899876666544322221110 012210 11221 00111111
Q ss_pred HHHHHHHhhHHHHHHHhcCCCCCcEEEe--CCCc-chHHHHHHHhCCCcEEEecchHHHHHHHHhhhccCCCCCCCCCCC
Q 042753 83 MRVLRELHYPALLDWFKSHPSPPVAILS--DFFL-GWTQGLAAELGLPRVVFSPSGAFALSVSFAMWTDLPTNDDPDNVD 159 (473)
Q Consensus 83 ~~~~~~~~~~~l~~~l~~~~~~pD~VV~--D~~~-~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 159 (473)
..+. .....+.+++++. +||+|++ |... ..+..+|+++|||++.+....-
T Consensus 94 -~~~~-~~~~~l~~~l~~~--kPDvVi~~g~~~~~~~~~~aa~~~~IPv~h~~ag~r----------------------- 146 (396)
T 3dzc_A 94 -GVTS-KILLGMQQVLSSE--QPDVVLVHGDTATTFAASLAAYYQQIPVGHVEAGLR----------------------- 146 (396)
T ss_dssp -HHHH-HHHHHHHHHHHHH--CCSEEEEETTSHHHHHHHHHHHTTTCCEEEETCCCC-----------------------
T ss_pred -HHHH-HHHHHHHHHHHhc--CCCEEEEECCchhHHHHHHHHHHhCCCEEEEECCcc-----------------------
Confidence 1222 3456788889999 9999997 3233 2346788999999876421100
Q ss_pred ccccCCCCCCCCCCCccccchhhhccCCCCCchHHHHHHhhhccCCcEEeecchHHhhHHHHHHHHH-hhCCCcEEEec-
Q 042753 160 ALVSFPRVPNCPVYPWYQISHLYRTLKEGDPDWDLHRSNMMANKTSWGIVFNSFAELERVYIDHMKK-EMGHDRVWAVG- 237 (473)
Q Consensus 160 ~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~le~~~~~~~~~-~~~~~~~~~vG- 237 (473)
. ..++ ........+..... ..+.++..+-. .. +.+.. -.+..++.++|
T Consensus 147 ------s------~~~~-----------~~~~~~~~r~~~~~--~a~~~~~~se~-~~----~~l~~~G~~~~ki~vvGn 196 (396)
T 3dzc_A 147 ------T------GNIY-----------SPWPEEGNRKLTAA--LTQYHFAPTDT-SR----ANLLQENYNAENIFVTGN 196 (396)
T ss_dssp ------C------SCTT-----------SSTTHHHHHHHHHH--TCSEEEESSHH-HH----HHHHHTTCCGGGEEECCC
T ss_pred ------c------cccc-----------cCCcHHHHHHHHHH--hcCEEECCCHH-HH----HHHHHcCCCcCcEEEECC
Confidence 0 0000 00001111111111 12333333321 11 11111 11103688888
Q ss_pred cCCCCCCcchhhccCCCCCCCChhhhHHHhc-CCCCCcEEEEEeCCcccCCHHHHHHHHHHHHh-----CCCcEEEEEeC
Q 042753 238 PVLPPDDDLVESMCRGGSSSVPAHDVLTWLD-SRRDESVVYVCFGSRYVLTAKQIHELAAALEK-----TDVDFVYCVRE 311 (473)
Q Consensus 238 pl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~~~~V~vs~Gs~~~~~~~~~~~~~~al~~-----~~~~~i~~~~~ 311 (473)
|..... . .............+.+.+.++ -..++++|+++.+-..+.... +..+++++++ .+.++++.++.
T Consensus 197 ~~~d~~-~--~~~~~~~~~~~~~~~~r~~lg~l~~~~~~vlv~~hR~~~~~~~-~~~ll~A~~~l~~~~~~~~~v~~~g~ 272 (396)
T 3dzc_A 197 TVIDAL-L--AVREKIHTDMDLQATLESQFPMLDASKKLILVTGHRRESFGGG-FERICQALITTAEQHPECQILYPVHL 272 (396)
T ss_dssp HHHHHH-H--HHHHHHHHCHHHHHHHHHTCTTCCTTSEEEEEECSCBCCCTTH-HHHHHHHHHHHHHHCTTEEEEEECCB
T ss_pred cHHHHH-H--HhhhhcccchhhHHHHHHHhCccCCCCCEEEEEECCcccchhH-HHHHHHHHHHHHHhCCCceEEEEeCC
Confidence 443322 1 000000000000022233332 113567777775332222222 4556666553 34566665543
Q ss_pred CCccCCcccCCCCchhhHHhh-cCCCeEeecCcc---HHHhhhccCccceeeccCchhHHHHHhhCCeEecCcccccchh
Q 042753 312 PDERHASQDCGVLPDGFEDRV-AGRGYVIRGWSQ---QVAILRHKAVGAFLTHCGWNSVLEGVSAGVVMLTWPMDADQYT 387 (473)
Q Consensus 312 ~~~~~~~~~~~~lp~~~~~~~-~~~nv~v~~~~p---q~~lL~~~~v~~~ItHgG~~s~~eal~~GvP~l~~P~~~DQ~~ 387 (473)
+. .+-+.+.+.. ..+++.+.++++ ...+++.+++ +|+-+| |.+.||.++|+|+|+..-..+++.
T Consensus 273 ~~---------~~~~~l~~~~~~~~~v~~~~~lg~~~~~~l~~~ad~--vv~~SG-g~~~EA~a~G~PvV~~~~~~~~~e 340 (396)
T 3dzc_A 273 NP---------NVREPVNKLLKGVSNIVLIEPQQYLPFVYLMDRAHI--ILTDSG-GIQEEAPSLGKPVLVMRETTERPE 340 (396)
T ss_dssp CH---------HHHHHHHHHTTTCTTEEEECCCCHHHHHHHHHHCSE--EEESCS-GGGTTGGGGTCCEEECCSSCSCHH
T ss_pred Ch---------HHHHHHHHHHcCCCCEEEeCCCCHHHHHHHHHhcCE--EEECCc-cHHHHHHHcCCCEEEccCCCcchH
Confidence 21 0112222221 235788877775 4568888997 999988 666799999999999855555432
Q ss_pred hHHHHHHHhcceEEeccCCCCCCCHHHHHHHHHHHhCCcHHHHHHHH
Q 042753 388 NAQLLVDQLGVGIRVGEGTRNIPESDELARLLAQSVDGPRRERLKAR 434 (473)
Q Consensus 388 na~rv~~~~G~G~~l~~~~~~~~~~~~l~~~i~~~l~~~~~~~~~a~ 434 (473)
+.+. |.++.+. . +.++|.+++.++++|+ ..+++..
T Consensus 341 ----~v~~-G~~~lv~---~---d~~~l~~ai~~ll~d~-~~~~~m~ 375 (396)
T 3dzc_A 341 ----AVAA-GTVKLVG---T---NQQQICDALSLLLTDP-QAYQAMS 375 (396)
T ss_dssp ----HHHH-TSEEECT---T---CHHHHHHHHHHHHHCH-HHHHHHH
T ss_pred ----HHHc-CceEEcC---C---CHHHHHHHHHHHHcCH-HHHHHHh
Confidence 2335 8886654 2 6999999999999987 6554443
|
| >2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A* | Back alignment and structure |
|---|
Probab=99.32 E-value=8e-10 Score=108.66 Aligned_cols=345 Identities=13% Similarity=0.067 Sum_probs=182.7
Q ss_pred CccEEEEEcC---CC-CCChHHHHHHHHHHHhCCCeEEEEeCCCChhhhhhhccCCCCCCeeEEEcCCCCCCCCCChhhH
Q 042753 4 AGAHILVYPF---PT-SGHIIPLLDLTNRLLTLGLNVTVLITQNNLPLLDSLNANHPSTSLQSLVLPQPKWPAGSPATRL 79 (473)
Q Consensus 4 ~~~~Il~~~~---~~-~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~i~~~~~~~~~~~~~f~~l~~~~~~~~~~~~~~ 79 (473)
.||||+++.. +. .|.-.-...+++.|.++||+|++++.......+..... ..+ .+..++.. ...
T Consensus 19 ~~MkIl~i~~~~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~---~~~-~~~~~~~~--------~~~ 86 (406)
T 2gek_A 19 SHMRIGMVCPYSFDVPGGVQSHVLQLAEVLRDAGHEVSVLAPASPHVKLPDYVV---SGG-KAVPIPYN--------GSV 86 (406)
T ss_dssp --CEEEEECSSCTTSCCHHHHHHHHHHHHHHHTTCEEEEEESCCTTSCCCTTEE---ECC-CCC----------------
T ss_pred CcceEEEEeccCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecCCccccCCcccc---cCC-cEEecccc--------CCc
Confidence 3899998773 22 46668899999999999999999998754321111100 001 11112210 000
Q ss_pred HHHHHHHHHHhhHHHHHHHhcCCCCCcEEEeCCCcc--hHHHHHHHhCCCcEEEecchHHHHHHHHhhhccCCCCCCCCC
Q 042753 80 LKFMRVLRELHYPALLDWFKSHPSPPVAILSDFFLG--WTQGLAAELGLPRVVFSPSGAFALSVSFAMWTDLPTNDDPDN 157 (473)
Q Consensus 80 ~~~~~~~~~~~~~~l~~~l~~~~~~pD~VV~D~~~~--~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 157 (473)
..+. ........+.+++++. +||+|++..... .+..+++..++|+|........
T Consensus 87 ~~~~--~~~~~~~~l~~~l~~~--~~Dii~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~-------------------- 142 (406)
T 2gek_A 87 ARLR--FGPATHRKVKKWIAEG--DFDVLHIHEPNAPSLSMLALQAAEGPIVATFHTSTT-------------------- 142 (406)
T ss_dssp ------CCHHHHHHHHHHHHHH--CCSEEEEECCCSSSHHHHHHHHEESSEEEEECCCCC--------------------
T ss_pred cccc--ccHHHHHHHHHHHHhc--CCCEEEECCccchHHHHHHHHhcCCCEEEEEcCcch--------------------
Confidence 0000 0001234567778888 999999876644 3456677779999875333110
Q ss_pred CCccccCCCCCCCCCCCccccchhhhccCCCCCchHHHHHH-hhhccCCcEEeecchHHhhHHHHHHHHHhhCCCcEEEe
Q 042753 158 VDALVSFPRVPNCPVYPWYQISHLYRTLKEGDPDWDLHRSN-MMANKTSWGIVFNSFAELERVYIDHMKKEMGHDRVWAV 236 (473)
Q Consensus 158 ~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~s~~~le~~~~~~~~~~~~~~~~~~v 236 (473)
.. . ....+.+. .......+.++..|-...+ .+...++.+++ .+
T Consensus 143 -----------------~~---~----------~~~~~~~~~~~~~~~~d~ii~~s~~~~~-----~~~~~~~~~~~-vi 186 (406)
T 2gek_A 143 -----------------KS---L----------TLSVFQGILRPYHEKIIGRIAVSDLARR-----WQMEALGSDAV-EI 186 (406)
T ss_dssp -----------------SH---H----------HHHHHHSTTHHHHTTCSEEEESSHHHHH-----HHHHHHSSCEE-EC
T ss_pred -----------------hh---h----------hHHHHHHHHHHHHhhCCEEEECCHHHHH-----HHHHhcCCCcE-Ee
Confidence 00 0 00000000 1233455666666532221 22223331334 44
Q ss_pred ccCCCCCCcchhhccCCCCCCCChhhhHHHhcCCCCCcEEEEEeCCc-cc-CCHHHHHHHHHHHHhC--CCcEEEEEeCC
Q 042753 237 GPVLPPDDDLVESMCRGGSSSVPAHDVLTWLDSRRDESVVYVCFGSR-YV-LTAKQIHELAAALEKT--DVDFVYCVREP 312 (473)
Q Consensus 237 Gpl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~V~vs~Gs~-~~-~~~~~~~~~~~al~~~--~~~~i~~~~~~ 312 (473)
..-+... . ... ..... .. .....+++..|+. .. ...+.+-+.+..+.+. +.++ ..++..
T Consensus 187 ~~~v~~~-~----~~~----~~~~~------~~-~~~~~~i~~~G~~~~~~Kg~~~li~a~~~l~~~~~~~~l-~i~G~~ 249 (406)
T 2gek_A 187 PNGVDVA-S----FAD----APLLD------GY-PREGRTVLFLGRYDEPRKGMAVLLAALPKLVARFPDVEI-LIVGRG 249 (406)
T ss_dssp CCCBCHH-H----HHT----CCCCT------TC-SCSSCEEEEESCTTSGGGCHHHHHHHHHHHHTTSTTCEE-EEESCS
T ss_pred cCCCChh-h----cCC----Cchhh------hc-cCCCeEEEEEeeeCccccCHHHHHHHHHHHHHHCCCeEE-EEEcCC
Confidence 4322211 0 000 00000 00 1123567777887 43 2334444444444332 3343 344443
Q ss_pred CccCCcccCCCCchhhHHhhc--CCCeEeecCccHH---HhhhccCccceee----ccC-chhHHHHHhhCCeEecCccc
Q 042753 313 DERHASQDCGVLPDGFEDRVA--GRGYVIRGWSQQV---AILRHKAVGAFLT----HCG-WNSVLEGVSAGVVMLTWPMD 382 (473)
Q Consensus 313 ~~~~~~~~~~~lp~~~~~~~~--~~nv~v~~~~pq~---~lL~~~~v~~~It----HgG-~~s~~eal~~GvP~l~~P~~ 382 (473)
. . +.+.+... .+++.+.+++++. +++..+++ +|. +.| .+++.||+++|+|+|+.+.
T Consensus 250 ~---------~--~~l~~~~~~~~~~v~~~g~~~~~~~~~~~~~adv--~v~ps~~~e~~~~~~~Ea~a~G~PvI~~~~- 315 (406)
T 2gek_A 250 D---------E--DELREQAGDLAGHLRFLGQVDDATKASAMRSADV--YCAPHLGGESFGIVLVEAMAAGTAVVASDL- 315 (406)
T ss_dssp C---------H--HHHHHHTGGGGGGEEECCSCCHHHHHHHHHHSSE--EEECCCSCCSSCHHHHHHHHHTCEEEECCC-
T ss_pred c---------H--HHHHHHHHhccCcEEEEecCCHHHHHHHHHHCCE--EEecCCCCCCCchHHHHHHHcCCCEEEecC-
Confidence 1 1 33333222 4688899999874 68888998 553 334 4489999999999999765
Q ss_pred ccchhhHHHHHHHhcceEEeccCCCCCCCHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHH
Q 042753 383 ADQYTNAQLLVDQLGVGIRVGEGTRNIPESDELARLLAQSVDGPRRERLKARELSGAALSAVVKGGSSDRDLNDFIKRIN 462 (473)
Q Consensus 383 ~DQ~~na~rv~~~~G~G~~l~~~~~~~~~~~~l~~~i~~~l~~~~~~~~~a~~~~~~~~~~~~~~gs~~~~~~~~~~~~~ 462 (473)
......+.+. +.|...+ .-+.+++.++|.++++|+ ..+++.. +..++.+. .-+.+..++++++.+.
T Consensus 316 ---~~~~e~i~~~-~~g~~~~-----~~d~~~l~~~i~~l~~~~-~~~~~~~---~~~~~~~~-~~s~~~~~~~~~~~~~ 381 (406)
T 2gek_A 316 ---DAFRRVLADG-DAGRLVP-----VDDADGMAAALIGILEDD-QLRAGYV---ARASERVH-RYDWSVVSAQIMRVYE 381 (406)
T ss_dssp ---HHHHHHHTTT-TSSEECC-----TTCHHHHHHHHHHHHHCH-HHHHHHH---HHHHHHGG-GGBHHHHHHHHHHHHH
T ss_pred ---CcHHHHhcCC-CceEEeC-----CCCHHHHHHHHHHHHcCH-HHHHHHH---HHHHHHHH-hCCHHHHHHHHHHHHH
Confidence 4455555533 5787776 347899999999999987 5443322 22222223 4567777778877777
Q ss_pred hhc
Q 042753 463 ELK 465 (473)
Q Consensus 463 ~~~ 465 (473)
+..
T Consensus 382 ~~~ 384 (406)
T 2gek_A 382 TVS 384 (406)
T ss_dssp HHC
T ss_pred HHH
Confidence 663
|
| >1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A* | Back alignment and structure |
|---|
Probab=99.32 E-value=1.4e-11 Score=120.44 Aligned_cols=163 Identities=17% Similarity=0.171 Sum_probs=99.2
Q ss_pred CCcEEEEEeCCcccCCHHHHHHHHHHHHh----C-CCcEEEEEeCCCccCCcccCCCCchhhHHhhc-CCCeEeecCccH
Q 042753 272 DESVVYVCFGSRYVLTAKQIHELAAALEK----T-DVDFVYCVREPDERHASQDCGVLPDGFEDRVA-GRGYVIRGWSQQ 345 (473)
Q Consensus 272 ~~~~V~vs~Gs~~~~~~~~~~~~~~al~~----~-~~~~i~~~~~~~~~~~~~~~~~lp~~~~~~~~-~~nv~v~~~~pq 345 (473)
++++|+++.|......+ .+..+++++++ . +.++++..+.+ ..+-+.+.+... .+++.+.+++++
T Consensus 204 ~~~~vl~~~gr~~~~~k-g~~~li~a~~~l~~~~~~~~l~i~~g~~---------~~~~~~l~~~~~~~~~v~~~g~~~~ 273 (384)
T 1vgv_A 204 DKKMILVTGHRRESFGR-GFEEICHALADIATTHQDIQIVYPVHLN---------PNVREPVNRILGHVKNVILIDPQEY 273 (384)
T ss_dssp TSEEEEEECCCBSSCCH-HHHHHHHHHHHHHHHCTTEEEEEECCBC---------HHHHHHHHHHHTTCTTEEEECCCCH
T ss_pred CCCEEEEEeCCccccch-HHHHHHHHHHHHHhhCCCeEEEEEcCCC---------HHHHHHHHHHhhcCCCEEEeCCCCH
Confidence 46778888887754322 34445555543 2 44555533322 001122322222 357888666664
Q ss_pred ---HHhhhccCccceeeccCchhHHHHHhhCCeEecCcccccchhhHHHHHHHhcceEEeccCCCCCCCHHHHHHHHHHH
Q 042753 346 ---VAILRHKAVGAFLTHCGWNSVLEGVSAGVVMLTWPMDADQYTNAQLLVDQLGVGIRVGEGTRNIPESDELARLLAQS 422 (473)
Q Consensus 346 ---~~lL~~~~v~~~ItHgG~~s~~eal~~GvP~l~~P~~~DQ~~na~rv~~~~G~G~~l~~~~~~~~~~~~l~~~i~~~ 422 (473)
.++++.+++ ||+.+| +.+.||+++|+|+|+.+..++... +.+. |.|+.++ . +.++|.++|.++
T Consensus 274 ~~~~~~~~~ad~--~v~~Sg-~~~lEA~a~G~PvI~~~~~~~~~e----~v~~-g~g~lv~---~---d~~~la~~i~~l 339 (384)
T 1vgv_A 274 LPFVWLMNHAWL--ILTDSG-GIQEEAPSLGKPVLVMRDTTERPE----AVTA-GTVRLVG---T---DKQRIVEEVTRL 339 (384)
T ss_dssp HHHHHHHHHCSE--EEESSS-TGGGTGGGGTCCEEEESSCCSCHH----HHHH-TSEEEEC---S---SHHHHHHHHHHH
T ss_pred HHHHHHHHhCcE--EEECCc-chHHHHHHcCCCEEEccCCCCcch----hhhC-CceEEeC---C---CHHHHHHHHHHH
Confidence 567899997 898885 448899999999999987444333 3435 8898887 3 899999999999
Q ss_pred hCCcHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHh
Q 042753 423 VDGPRRERLKARELSGAALSAVVKGGSSDRDLNDFIKRINE 463 (473)
Q Consensus 423 l~~~~~~~~~a~~~~~~~~~~~~~~gs~~~~~~~~~~~~~~ 463 (473)
++|+ ..+++.. +..++. ....+.++.++.+.+.+++
T Consensus 340 l~d~-~~~~~~~---~~~~~~-~~~~~~~~i~~~~~~~~~~ 375 (384)
T 1vgv_A 340 LKDE-NEYQAMS---RAHNPY-GDGQACSRILEALKNNRIS 375 (384)
T ss_dssp HHCH-HHHHHHH---SSCCTT-CCSCHHHHHHHHHHHTCCC
T ss_pred HhCh-HHHhhhh---hccCCC-cCCCHHHHHHHHHHHHHHh
Confidence 9986 5443332 222222 2345555555555554433
|
| >3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.29 E-value=3.3e-12 Score=125.64 Aligned_cols=162 Identities=14% Similarity=0.158 Sum_probs=100.9
Q ss_pred CCcEEEEEeCCcccCCHHHHHHHHHHHHh-----CCCcEEEEEeCCCccCCcccCCCCchhhHHhh-cCCCeEeecCccH
Q 042753 272 DESVVYVCFGSRYVLTAKQIHELAAALEK-----TDVDFVYCVREPDERHASQDCGVLPDGFEDRV-AGRGYVIRGWSQQ 345 (473)
Q Consensus 272 ~~~~V~vs~Gs~~~~~~~~~~~~~~al~~-----~~~~~i~~~~~~~~~~~~~~~~~lp~~~~~~~-~~~nv~v~~~~pq 345 (473)
++++++++.|....... .+..+++++.+ .+.++++..+.+. .+-+.+.+.. ..+++.+.+++++
T Consensus 223 ~~~~vlv~~~r~~~~~~-~l~~ll~a~~~l~~~~~~~~~v~~~~~~~---------~~~~~l~~~~~~~~~v~l~~~l~~ 292 (403)
T 3ot5_A 223 DNRLILMTAHRRENLGE-PMQGMFEAVREIVESREDTELVYPMHLNP---------AVREKAMAILGGHERIHLIEPLDA 292 (403)
T ss_dssp TCEEEEECCCCHHHHTT-HHHHHHHHHHHHHHHCTTEEEEEECCSCH---------HHHHHHHHHHTTCTTEEEECCCCH
T ss_pred CCCEEEEEeCcccccCc-HHHHHHHHHHHHHHhCCCceEEEecCCCH---------HHHHHHHHHhCCCCCEEEeCCCCH
Confidence 56788887665332221 23455555543 3456666544321 1112222212 2358888898864
Q ss_pred ---HHhhhccCccceeeccCchhHHHHHhhCCeEecCcccccchhhHHHHHHHhcceEEeccCCCCCCCHHHHHHHHHHH
Q 042753 346 ---VAILRHKAVGAFLTHCGWNSVLEGVSAGVVMLTWPMDADQYTNAQLLVDQLGVGIRVGEGTRNIPESDELARLLAQS 422 (473)
Q Consensus 346 ---~~lL~~~~v~~~ItHgG~~s~~eal~~GvP~l~~P~~~DQ~~na~rv~~~~G~G~~l~~~~~~~~~~~~l~~~i~~~ 422 (473)
..+++.+++ +|+.+|..+ .||.++|+|+|++|...+++.. + +. |.|+.+. .+.++|.+++.++
T Consensus 293 ~~~~~l~~~ad~--vv~~SGg~~-~EA~a~g~PvV~~~~~~~~~e~---v-~~-g~~~lv~------~d~~~l~~ai~~l 358 (403)
T 3ot5_A 293 IDFHNFLRKSYL--VFTDSGGVQ-EEAPGMGVPVLVLRDTTERPEG---I-EA-GTLKLIG------TNKENLIKEALDL 358 (403)
T ss_dssp HHHHHHHHHEEE--EEECCHHHH-HHGGGTTCCEEECCSSCSCHHH---H-HH-TSEEECC------SCHHHHHHHHHHH
T ss_pred HHHHHHHHhcCE--EEECCccHH-HHHHHhCCCEEEecCCCcchhh---e-eC-CcEEEcC------CCHHHHHHHHHHH
Confidence 457888997 898875333 7999999999999766666542 3 35 8887765 2799999999999
Q ss_pred hCCcHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHH
Q 042753 423 VDGPRRERLKARELSGAALSAVVKGGSSDRDLNDFIKRIN 462 (473)
Q Consensus 423 l~~~~~~~~~a~~~~~~~~~~~~~~gs~~~~~~~~~~~~~ 462 (473)
++|+ ..+++..+-...+ .+|+++++.++.+.+++.
T Consensus 359 l~~~-~~~~~m~~~~~~~----g~~~aa~rI~~~l~~~l~ 393 (403)
T 3ot5_A 359 LDNK-ESHDKMAQAANPY----GDGFAANRILAAIKSHFE 393 (403)
T ss_dssp HHCH-HHHHHHHHSCCTT----CCSCHHHHHHHHHHHHHT
T ss_pred HcCH-HHHHHHHhhcCcc----cCCcHHHHHHHHHHHHhC
Confidence 9987 6655443322222 456667776666666554
|
| >3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A* | Back alignment and structure |
|---|
Probab=99.24 E-value=1.2e-08 Score=101.24 Aligned_cols=161 Identities=12% Similarity=0.088 Sum_probs=100.3
Q ss_pred EEEEEeCCcc-c-CCHHHHHHHHHHHHhCC--CcEE-EEEeCCCccCCcccCCCCchhhHH---hhcCCCeEeecCccHH
Q 042753 275 VVYVCFGSRY-V-LTAKQIHELAAALEKTD--VDFV-YCVREPDERHASQDCGVLPDGFED---RVAGRGYVIRGWSQQV 346 (473)
Q Consensus 275 ~V~vs~Gs~~-~-~~~~~~~~~~~al~~~~--~~~i-~~~~~~~~~~~~~~~~~lp~~~~~---~~~~~nv~v~~~~pq~ 346 (473)
.+++..|+.. . ...+.+-+.+..+.+.. ..+- +.++... +...+.+.+ +.. .++...+|+|+.
T Consensus 252 ~~i~~~G~~~~~~Kg~~~li~a~~~l~~~~~~~~~~l~i~G~g~--------~~~~~~l~~~~~~~~-~~~~~~g~~~~~ 322 (439)
T 3fro_A 252 VTFMFIGRFDRGQKGVDVLLKAIEILSSKKEFQEMRFIIIGKGD--------PELEGWARSLEEKHG-NVKVITEMLSRE 322 (439)
T ss_dssp EEEEEECCSSCTTBCHHHHHHHHHHHHTSGGGGGEEEEEECCCC--------HHHHHHHHHHHHHCT-TEEEECSCCCHH
T ss_pred cEEEEEcccccccccHHHHHHHHHHHHhcccCCCeEEEEEcCCC--------hhHHHHHHHHHhhcC-CEEEEcCCCCHH
Confidence 7888889886 3 34555555555555432 2233 3334321 101122222 222 456677889885
Q ss_pred H---hhhccCccceee----ccCchhHHHHHhhCCeEecCcccccchhhHHHHHHHhcceEEeccCCCCCCCHHHHHHHH
Q 042753 347 A---ILRHKAVGAFLT----HCGWNSVLEGVSAGVVMLTWPMDADQYTNAQLLVDQLGVGIRVGEGTRNIPESDELARLL 419 (473)
Q Consensus 347 ~---lL~~~~v~~~It----HgG~~s~~eal~~GvP~l~~P~~~DQ~~na~rv~~~~G~G~~l~~~~~~~~~~~~l~~~i 419 (473)
+ ++..+++ +|. -|-.+++.||+++|+|+|+... ......+. . |.|..++ .-+.+++.++|
T Consensus 323 ~~~~~~~~adv--~v~ps~~e~~~~~~~EAma~G~Pvi~s~~----~~~~e~~~-~-~~g~~~~-----~~d~~~la~~i 389 (439)
T 3fro_A 323 FVRELYGSVDF--VIIPSYFEPFGLVALEAMCLGAIPIASAV----GGLRDIIT-N-ETGILVK-----AGDPGELANAI 389 (439)
T ss_dssp HHHHHHTTCSE--EEECBSCCSSCHHHHHHHHTTCEEEEESS----THHHHHCC-T-TTCEEEC-----TTCHHHHHHHH
T ss_pred HHHHHHHHCCE--EEeCCCCCCccHHHHHHHHCCCCeEEcCC----CCcceeEE-c-CceEEeC-----CCCHHHHHHHH
Confidence 4 6788887 553 2445799999999999998643 34444443 4 7888887 35789999999
Q ss_pred HHHhC-Cc---HHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHhhc
Q 042753 420 AQSVD-GP---RRERLKARELSGAALSAVVKGGSSDRDLNDFIKRINELK 465 (473)
Q Consensus 420 ~~~l~-~~---~~~~~~a~~~~~~~~~~~~~~gs~~~~~~~~~~~~~~~~ 465 (473)
.++++ ++ ..+.+++++..+ .-+.+..++++++.+++.-
T Consensus 390 ~~ll~~~~~~~~~~~~~~~~~~~--------~~s~~~~~~~~~~~~~~~~ 431 (439)
T 3fro_A 390 LKALELSRSDLSKFRENCKKRAM--------SFSWEKSAERYVKAYTGSI 431 (439)
T ss_dssp HHHHHHTTTTTHHHHHHHHHHHH--------TSCHHHHHHHHHHHHHTCS
T ss_pred HHHHhcCHHHHHHHHHHHHHHHh--------hCcHHHHHHHHHHHHHHHH
Confidence 99998 65 234444433332 2567788888888887763
|
| >2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A* | Back alignment and structure |
|---|
Probab=99.22 E-value=6e-09 Score=105.60 Aligned_cols=115 Identities=13% Similarity=0.070 Sum_probs=74.3
Q ss_pred CCCeEeecCccHH---Hhhhcc----Cccceeec----cCchhHHHHHhhCCeEecCcccccchhhHHHHHHHhcceEEe
Q 042753 334 GRGYVIRGWSQQV---AILRHK----AVGAFLTH----CGWNSVLEGVSAGVVMLTWPMDADQYTNAQLLVDQLGVGIRV 402 (473)
Q Consensus 334 ~~nv~v~~~~pq~---~lL~~~----~v~~~ItH----gG~~s~~eal~~GvP~l~~P~~~DQ~~na~rv~~~~G~G~~l 402 (473)
.++|.+.+++|+. +++..+ ++ +|.- |-..+++||+++|+|+|+... ......+. .-..|..+
T Consensus 334 ~~~V~~~G~v~~~~~~~~~~~a~~~~dv--~v~pS~~Eg~~~~~lEAma~G~PvI~s~~----~g~~e~v~-~~~~g~l~ 406 (499)
T 2r60_A 334 RGKVSMFPLNSQQELAGCYAYLASKGSV--FALTSFYEPFGLAPVEAMASGLPAVVTRN----GGPAEILD-GGKYGVLV 406 (499)
T ss_dssp BTTEEEEECCSHHHHHHHHHHHHHTTCE--EEECCSCBCCCSHHHHHHHTTCCEEEESS----BHHHHHTG-GGTSSEEE
T ss_pred CceEEECCCCCHHHHHHHHHhcCcCCCE--EEECcccCCCCcHHHHHHHcCCCEEEecC----CCHHHHhc-CCceEEEe
Confidence 4578889999765 467788 87 5532 335689999999999998753 34444454 41478888
Q ss_pred ccCCCCCCCHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHhh
Q 042753 403 GEGTRNIPESDELARLLAQSVDGPRRERLKARELSGAALSAVVKGGSSDRDLNDFIKRINEL 464 (473)
Q Consensus 403 ~~~~~~~~~~~~l~~~i~~~l~~~~~~~~~a~~~~~~~~~~~~~~gs~~~~~~~~~~~~~~~ 464 (473)
+ .-+.+++.++|.++++|+ ..+++.. +..++.+...-+.+..++++++.+.+.
T Consensus 407 ~-----~~d~~~la~~i~~ll~~~-~~~~~~~---~~a~~~~~~~fs~~~~~~~~~~~y~~~ 459 (499)
T 2r60_A 407 D-----PEDPEDIARGLLKAFESE-ETWSAYQ---EKGKQRVEERYTWQETARGYLEVIQEI 459 (499)
T ss_dssp C-----TTCHHHHHHHHHHHHSCH-HHHHHHH---HHHHHHHHHHSBHHHHHHHHHHHHHHH
T ss_pred C-----CCCHHHHHHHHHHHHhCH-HHHHHHH---HHHHHHHHHhCCHHHHHHHHHHHHHHH
Confidence 7 357899999999999987 4333222 111111122244566666666665554
|
| >2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A* | Back alignment and structure |
|---|
Probab=99.22 E-value=2e-08 Score=98.37 Aligned_cols=353 Identities=9% Similarity=0.036 Sum_probs=182.1
Q ss_pred cEEEEEcCCCC-CChHHHHHHHHHHHhCCCeEEEEeCCCChhhhhhhccCCCCCCeeEEEcCCCCCCCCCChhhHHHHHH
Q 042753 6 AHILVYPFPTS-GHIIPLLDLTNRLLTLGLNVTVLITQNNLPLLDSLNANHPSTSLQSLVLPQPKWPAGSPATRLLKFMR 84 (473)
Q Consensus 6 ~~Il~~~~~~~-GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~i~~~~~~~~~~~~~f~~l~~~~~~~~~~~~~~~~~~~ 84 (473)
.++....+|.. |.-.-...|++.|.++||+|++++...... .... .+++.+..++......... .. ..+
T Consensus 16 ~~~~~~~~p~~GG~~~~~~~la~~L~~~G~~V~v~~~~~~~~-~~~~-----~~~i~~~~~~~~~~~~~~~-~~-~~~-- 85 (394)
T 2jjm_A 16 LKIGITCYPSVGGSGVVGTELGKQLAERGHEIHFITSGLPFR-LNKV-----YPNIYFHEVTVNQYSVFQY-PP-YDL-- 85 (394)
T ss_dssp CEEEEECCC--CHHHHHHHHHHHHHHHTTCEEEEECSSCC-----CC-----CTTEEEECCCCC----CCS-CC-HHH--
T ss_pred eeeehhcCCCCCCHHHHHHHHHHHHHhCCCEEEEEeCCCCCc-cccc-----CCceEEEeccccccccccc-cc-ccH--
Confidence 56766666655 666778899999999999999999864321 1111 1356666554321110100 00 000
Q ss_pred HHHHHhhHHHHHHHhcCCCCCcEEEeCCCcc--hHHHHHHHh---CCCcEEEecchHHHHHHHHhhhccCCCCCCCCCCC
Q 042753 85 VLRELHYPALLDWFKSHPSPPVAILSDFFLG--WTQGLAAEL---GLPRVVFSPSGAFALSVSFAMWTDLPTNDDPDNVD 159 (473)
Q Consensus 85 ~~~~~~~~~l~~~l~~~~~~pD~VV~D~~~~--~~~~~A~~~---giP~v~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 159 (473)
.....+.+++++. +||+|++..... ....++..+ ++|+|......... ..
T Consensus 86 ----~~~~~l~~~l~~~--~~Dvv~~~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~------~~------------- 140 (394)
T 2jjm_A 86 ----ALASKMAEVAQRE--NLDILHVHYAIPHAICAYLAKQMIGERIKIVTTLHGTDIT------VL------------- 140 (394)
T ss_dssp ----HHHHHHHHHHHHH--TCSEEEECSSTTHHHHHHHHHHHTTTCSEEEEECCHHHHH------TT-------------
T ss_pred ----HHHHHHHHHHHHc--CCCEEEEcchhHHHHHHHHHHHhhcCCCCEEEEEecCccc------cc-------------
Confidence 2234566677778 999999875433 233444443 59987754332110 00
Q ss_pred ccccCCCCCCCCCCCccccchhhhccCCCCCchHHHHHHhhhccCCcEEeecchHHhhHHHHHHHHHhhCC-CcEEEecc
Q 042753 160 ALVSFPRVPNCPVYPWYQISHLYRTLKEGDPDWDLHRSNMMANKTSWGIVFNSFAELERVYIDHMKKEMGH-DRVWAVGP 238 (473)
Q Consensus 160 ~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~le~~~~~~~~~~~~~-~~~~~vGp 238 (473)
+. ......... ......+.++..|-... +.+...++. .++..+..
T Consensus 141 ------~~--------------------~~~~~~~~~---~~~~~ad~ii~~s~~~~-----~~~~~~~~~~~~~~vi~n 186 (394)
T 2jjm_A 141 ------GS--------------------DPSLNNLIR---FGIEQSDVVTAVSHSLI-----NETHELVKPNKDIQTVYN 186 (394)
T ss_dssp ------TT--------------------CTTTHHHHH---HHHHHSSEEEESCHHHH-----HHHHHHTCCSSCEEECCC
T ss_pred ------CC--------------------CHHHHHHHH---HHHhhCCEEEECCHHHH-----HHHHHhhCCcccEEEecC
Confidence 00 000111111 12334556665553221 122222220 36666664
Q ss_pred CCCCCCcchhhccCCCCCCCChhhhHHHhcCCCCCcEEEEEeCCccc-CCHHHHHHHHHHHHhC-CCcEEEEEeCCCccC
Q 042753 239 VLPPDDDLVESMCRGGSSSVPAHDVLTWLDSRRDESVVYVCFGSRYV-LTAKQIHELAAALEKT-DVDFVYCVREPDERH 316 (473)
Q Consensus 239 l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~V~vs~Gs~~~-~~~~~~~~~~~al~~~-~~~~i~~~~~~~~~~ 316 (473)
-+... . ......+.+.+.+.- +.+..+++..|+... ...+.+-+.+..+.+. +.++ +.++...
T Consensus 187 gv~~~-~---------~~~~~~~~~~~~~~~-~~~~~~i~~~G~~~~~Kg~~~li~a~~~l~~~~~~~l-~i~G~g~--- 251 (394)
T 2jjm_A 187 FIDER-V---------YFKRDMTQLKKEYGI-SESEKILIHISNFRKVKRVQDVVQAFAKIVTEVDAKL-LLVGDGP--- 251 (394)
T ss_dssp CCCTT-T---------CCCCCCHHHHHHTTC-C---CEEEEECCCCGGGTHHHHHHHHHHHHHSSCCEE-EEECCCT---
T ss_pred CccHH-h---------cCCcchHHHHHHcCC-CCCCeEEEEeeccccccCHHHHHHHHHHHHhhCCCEE-EEECCch---
Confidence 44332 1 001122333333332 134456667788753 2334443444444333 4443 4444321
Q ss_pred CcccCCCCchhhHHhhc----CCCeEeecCccH-HHhhhccCcccee----eccCchhHHHHHhhCCeEecCcccccchh
Q 042753 317 ASQDCGVLPDGFEDRVA----GRGYVIRGWSQQ-VAILRHKAVGAFL----THCGWNSVLEGVSAGVVMLTWPMDADQYT 387 (473)
Q Consensus 317 ~~~~~~~lp~~~~~~~~----~~nv~v~~~~pq-~~lL~~~~v~~~I----tHgG~~s~~eal~~GvP~l~~P~~~DQ~~ 387 (473)
..+.+.+... .+++.+.++..+ .+++..+++ +| .-|..+++.||+++|+|+|+.+.. .
T Consensus 252 -------~~~~l~~~~~~~~l~~~v~~~g~~~~~~~~~~~adv--~v~ps~~e~~~~~~~EAma~G~PvI~~~~~----~ 318 (394)
T 2jjm_A 252 -------EFCTILQLVKNLHIEDRVLFLGKQDNVAELLAMSDL--MLLLSEKESFGLVLLEAMACGVPCIGTRVG----G 318 (394)
T ss_dssp -------THHHHHHHHHTTTCGGGBCCCBSCSCTHHHHHTCSE--EEECCSCCSCCHHHHHHHHTTCCEEEECCT----T
T ss_pred -------HHHHHHHHHHHcCCCCeEEEeCchhhHHHHHHhCCE--EEeccccCCCchHHHHHHhcCCCEEEecCC----C
Confidence 1122322222 246766676543 568888997 66 556678999999999999997653 2
Q ss_pred hHHHHHHHhcceEEeccCCCCCCCHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHhhc
Q 042753 388 NAQLLVDQLGVGIRVGEGTRNIPESDELARLLAQSVDGPRRERLKARELSGAALSAVVKGGSSDRDLNDFIKRINELK 465 (473)
Q Consensus 388 na~rv~~~~G~G~~l~~~~~~~~~~~~l~~~i~~~l~~~~~~~~~a~~~~~~~~~~~~~~gs~~~~~~~~~~~~~~~~ 465 (473)
....+.+. +.|...+ .-+.+++.++|.++++|+ ..+++.. +..++.+...-+.+..++++++.+++..
T Consensus 319 ~~e~v~~~-~~g~~~~-----~~d~~~la~~i~~l~~~~-~~~~~~~---~~~~~~~~~~~s~~~~~~~~~~~~~~~~ 386 (394)
T 2jjm_A 319 IPEVIQHG-DTGYLCE-----VGDTTGVADQAIQLLKDE-ELHRNMG---ERARESVYEQFRSEKIVSQYETIYYDVL 386 (394)
T ss_dssp STTTCCBT-TTEEEEC-----TTCHHHHHHHHHHHHHCH-HHHHHHH---HHHHHHHHHHSCHHHHHHHHHHHHHHTC
T ss_pred hHHHhhcC-CceEEeC-----CCCHHHHHHHHHHHHcCH-HHHHHHH---HHHHHHHHHhCCHHHHHHHHHHHHHHHH
Confidence 23333322 5787776 347899999999999986 4333222 1222111233557777888888777763
|
| >3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A | Back alignment and structure |
|---|
Probab=99.14 E-value=5.9e-10 Score=108.45 Aligned_cols=161 Identities=17% Similarity=0.174 Sum_probs=94.5
Q ss_pred CCcEEEEEeCCcccCCHHHHHHHHHHHHh----C-CCcEEEEEeCCCccCCcccCCCCchhhHHhhc-CCCeEeecCccH
Q 042753 272 DESVVYVCFGSRYVLTAKQIHELAAALEK----T-DVDFVYCVREPDERHASQDCGVLPDGFEDRVA-GRGYVIRGWSQQ 345 (473)
Q Consensus 272 ~~~~V~vs~Gs~~~~~~~~~~~~~~al~~----~-~~~~i~~~~~~~~~~~~~~~~~lp~~~~~~~~-~~nv~v~~~~pq 345 (473)
++++|+++.|...... +.+..+++++++ . +.++++ +... . ..+-+.+.+... .+++.+.+++++
T Consensus 204 ~~~~vl~~~gr~~~~~-K~~~~li~a~~~l~~~~~~~~~i~--~~g~----~---~~~~~~~~~~~~~~~~v~~~g~~~~ 273 (375)
T 3beo_A 204 NNRLVLMTAHRRENLG-EPMRNMFRAIKRLVDKHEDVQVVY--PVHM----N---PVVRETANDILGDYGRIHLIEPLDV 273 (375)
T ss_dssp TSEEEEEECCCGGGTT-HHHHHHHHHHHHHHHHCTTEEEEE--ECCS----C---HHHHHHHHHHHTTCTTEEEECCCCH
T ss_pred CCCeEEEEecccccch-hHHHHHHHHHHHHHhhCCCeEEEE--eCCC----C---HHHHHHHHHHhhccCCEEEeCCCCH
Confidence 4567778888765322 234556666543 2 344433 3221 0 001122222222 268888777765
Q ss_pred ---HHhhhccCccceeeccCchhHHHHHhhCCeEecCcccccchhhHHHHHHHhcceEEeccCCCCCCCHHHHHHHHHHH
Q 042753 346 ---VAILRHKAVGAFLTHCGWNSVLEGVSAGVVMLTWPMDADQYTNAQLLVDQLGVGIRVGEGTRNIPESDELARLLAQS 422 (473)
Q Consensus 346 ---~~lL~~~~v~~~ItHgG~~s~~eal~~GvP~l~~P~~~DQ~~na~rv~~~~G~G~~l~~~~~~~~~~~~l~~~i~~~ 422 (473)
.++++.+++ +|+.+| +.+.||+++|+|+|+....+..+. +.+. |.|..++ . +.++|.++|.++
T Consensus 274 ~~~~~~~~~ad~--~v~~sg-~~~lEA~a~G~Pvi~~~~~~~~~e----~v~~-g~g~~v~-----~-d~~~la~~i~~l 339 (375)
T 3beo_A 274 IDFHNVAARSYL--MLTDSG-GVQEEAPSLGVPVLVLRDTTERPE----GIEA-GTLKLAG-----T-DEETIFSLADEL 339 (375)
T ss_dssp HHHHHHHHTCSE--EEECCH-HHHHHHHHHTCCEEECSSCCSCHH----HHHT-TSEEECC-----S-CHHHHHHHHHHH
T ss_pred HHHHHHHHhCcE--EEECCC-ChHHHHHhcCCCEEEecCCCCCce----eecC-CceEEcC-----C-CHHHHHHHHHHH
Confidence 467888997 888774 558899999999998854333322 3335 8887775 2 789999999999
Q ss_pred hCCcHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHH
Q 042753 423 VDGPRRERLKARELSGAALSAVVKGGSSDRDLNDFIKRI 461 (473)
Q Consensus 423 l~~~~~~~~~a~~~~~~~~~~~~~~gs~~~~~~~~~~~~ 461 (473)
++|+ ..+++.. +..++. ..+.+.++.++.+.+.+
T Consensus 340 l~~~-~~~~~~~---~~~~~~-~~~~~~~~i~~~~~~~~ 373 (375)
T 3beo_A 340 LSDK-EAHDKMS---KASNPY-GDGRASERIVEAILKHF 373 (375)
T ss_dssp HHCH-HHHHHHC---CCCCTT-CCSCHHHHHHHHHHHHT
T ss_pred HhCh-HhHhhhh---hcCCCC-CCCcHHHHHHHHHHHHh
Confidence 9986 5544332 222222 23455555555555443
|
| >4hwg_A UDP-N-acetylglucosamine 2-epimerase; ssgcid, structural genomics, seattle structural genomics center for infectious disease, isomerase; 2.00A {Rickettsia bellii} | Back alignment and structure |
|---|
Probab=99.12 E-value=2.9e-10 Score=110.81 Aligned_cols=349 Identities=11% Similarity=0.048 Sum_probs=182.3
Q ss_pred ccEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCCCChh-hhhhhccCCCCCCeeEEEcCCCCCCCCC-ChhhHHHH
Q 042753 5 GAHILVYPFPTSGHIIPLLDLTNRLLTLGLNVTVLITQNNLP-LLDSLNANHPSTSLQSLVLPQPKWPAGS-PATRLLKF 82 (473)
Q Consensus 5 ~~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~-~i~~~~~~~~~~~~~f~~l~~~~~~~~~-~~~~~~~~ 82 (473)
|-|++++ ++++-.+.=+.+|.++|.++ ++..++.+....+ .+.+... .++.+ +.+. -.+. .... .
T Consensus 9 ~~~~~~v-~GtRpe~~k~~p~~~~l~~~-~~~~~~~tgqh~~~~~~~~~~----~~~~i---~~~~-~~l~~~~~~---~ 75 (385)
T 4hwg_A 9 MLKVMTI-VGTRPELIKLCCVISEFDKH-TKHILVHTGQNYAYELNQVFF----DDMGI---RKPD-YFLEVAADN---T 75 (385)
T ss_dssp CCEEEEE-ECSHHHHHHHHHHHHHHHHH-SEEEEEECSCHHHHHHTHHHH----C-CCC---CCCS-EECCCCCCC---S
T ss_pred hhheeEE-EEcCHhHHHHHHHHHHHHhc-CCEEEEEeCCCCChhHHHHHH----hhCCC---CCCc-eecCCCCCC---H
Confidence 6666554 45777777888888999887 8888877765433 3333210 12222 1111 0011 0111 1
Q ss_pred HHHHHHHhhHHHHHHHhcCCCCCcEEEe--CCCcchHHHHHHHhCCCcEEEecchHHHHHHHHhhhccCCCCCCCCCCCc
Q 042753 83 MRVLRELHYPALLDWFKSHPSPPVAILS--DFFLGWTQGLAAELGLPRVVFSPSGAFALSVSFAMWTDLPTNDDPDNVDA 160 (473)
Q Consensus 83 ~~~~~~~~~~~l~~~l~~~~~~pD~VV~--D~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~ 160 (473)
...+. .....+.+++++. +||+|++ |....++..+|.++|||++.+....
T Consensus 76 ~~~~~-~~~~~l~~~l~~~--kPD~Vlv~gd~~~~~aalaA~~~~IPv~h~eagl------------------------- 127 (385)
T 4hwg_A 76 AKSIG-LVIEKVDEVLEKE--KPDAVLFYGDTNSCLSAIAAKRRKIPIFHMEAGN------------------------- 127 (385)
T ss_dssp HHHHH-HHHHHHHHHHHHH--CCSEEEEESCSGGGGGHHHHHHTTCCEEEESCCC-------------------------
T ss_pred HHHHH-HHHHHHHHHHHhc--CCcEEEEECCchHHHHHHHHHHhCCCEEEEeCCC-------------------------
Confidence 22222 3456778889999 9999986 3334455888999999976542110
Q ss_pred cccCCCCCCCCCCCccccchhhhccCCCCCchHHHHHHhhhccCCcEEeecchHHhhHHHHHHHHH-hhCCCcEEEec-c
Q 042753 161 LVSFPRVPNCPVYPWYQISHLYRTLKEGDPDWDLHRSNMMANKTSWGIVFNSFAELERVYIDHMKK-EMGHDRVWAVG-P 238 (473)
Q Consensus 161 ~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~le~~~~~~~~~-~~~~~~~~~vG-p 238 (473)
.+ .. ........+...... .+.++..+-..- +.+.. -.+..+++.+| |
T Consensus 128 -------rs---~~-------------~~~pee~nR~~~~~~--a~~~~~~te~~~-----~~l~~~G~~~~~I~vtGnp 177 (385)
T 4hwg_A 128 -------RC---FD-------------QRVPEEINRKIIDHI--SDVNITLTEHAR-----RYLIAEGLPAELTFKSGSH 177 (385)
T ss_dssp -------CC---SC-------------TTSTHHHHHHHHHHH--CSEEEESSHHHH-----HHHHHTTCCGGGEEECCCS
T ss_pred -------cc---cc-------------ccCcHHHHHHHHHhh--hceeecCCHHHH-----HHHHHcCCCcCcEEEECCc
Confidence 00 00 000001111111111 122233332111 11111 11103688898 4
Q ss_pred CCCCCCcchhhccCCCCCCCChhhhHHHhcCCCCCcEEEEEeCCcccCC-HHHHHHHHHHHHhC----CCcEEEEEeCCC
Q 042753 239 VLPPDDDLVESMCRGGSSSVPAHDVLTWLDSRRDESVVYVCFGSRYVLT-AKQIHELAAALEKT----DVDFVYCVREPD 313 (473)
Q Consensus 239 l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~V~vs~Gs~~~~~-~~~~~~~~~al~~~----~~~~i~~~~~~~ 313 (473)
..... . .... ....+++.+.++- ..++.|+++.|...... .+.+..+++++.+. +.++|+......
T Consensus 178 ~~D~~-~----~~~~---~~~~~~~~~~lgl-~~~~~iLvt~hr~e~~~~~~~l~~ll~al~~l~~~~~~~vv~p~~p~~ 248 (385)
T 4hwg_A 178 MPEVL-D----RFMP---KILKSDILDKLSL-TPKQYFLISSHREENVDVKNNLKELLNSLQMLIKEYNFLIIFSTHPRT 248 (385)
T ss_dssp HHHHH-H----HHHH---HHHHCCHHHHTTC-CTTSEEEEEECCC-----CHHHHHHHHHHHHHHHHHCCEEEEEECHHH
T ss_pred hHHHH-H----Hhhh---hcchhHHHHHcCC-CcCCEEEEEeCCchhcCcHHHHHHHHHHHHHHHhcCCeEEEEECChHH
Confidence 33321 1 0000 0011233444443 23678999988764432 24556677776542 567777554211
Q ss_pred ccCCcccCCCCchhhHHh---h-cCCCeEeecCcc---HHHhhhccCccceeeccCchhHHHHHhhCCeEecCcccccch
Q 042753 314 ERHASQDCGVLPDGFEDR---V-AGRGYVIRGWSQ---QVAILRHKAVGAFLTHCGWNSVLEGVSAGVVMLTWPMDADQY 386 (473)
Q Consensus 314 ~~~~~~~~~~lp~~~~~~---~-~~~nv~v~~~~p---q~~lL~~~~v~~~ItHgG~~s~~eal~~GvP~l~~P~~~DQ~ 386 (473)
-+.+.+. . ..+++.+.+.++ ...+++++++ +||-+|. .+.||.+.|+|+|+++...+-+
T Consensus 249 -----------~~~l~~~~~~~~~~~~v~l~~~lg~~~~~~l~~~adl--vvt~SGg-v~~EA~alG~Pvv~~~~~ter~ 314 (385)
T 4hwg_A 249 -----------KKRLEDLEGFKELGDKIRFLPAFSFTDYVKLQMNAFC--ILSDSGT-ITEEASILNLPALNIREAHERP 314 (385)
T ss_dssp -----------HHHHHTSGGGGGTGGGEEECCCCCHHHHHHHHHHCSE--EEECCTT-HHHHHHHTTCCEEECSSSCSCT
T ss_pred -----------HHHHHHHHHHhcCCCCEEEEcCCCHHHHHHHHHhCcE--EEECCcc-HHHHHHHcCCCEEEcCCCccch
Confidence 0111111 1 125777766655 4568899997 9999876 4699999999999998654422
Q ss_pred hhHHHHHHHhcceEEeccCCCCCCCHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHH
Q 042753 387 TNAQLLVDQLGVGIRVGEGTRNIPESDELARLLAQSVDGPRRERLKARELSGAALSAVVKGGSSDRDLNDFIKRIN 462 (473)
Q Consensus 387 ~na~rv~~~~G~G~~l~~~~~~~~~~~~l~~~i~~~l~~~~~~~~~a~~~~~~~~~~~~~~gs~~~~~~~~~~~~~ 462 (473)
. .+. . |.++.+. .+.++|.+++.++++|+ ...++..+-...+- .+|+++++.++.+.+++.
T Consensus 315 e---~v~-~-G~~~lv~------~d~~~i~~ai~~ll~d~-~~~~~m~~~~~~~~---g~g~aa~rI~~~l~~~~~ 375 (385)
T 4hwg_A 315 E---GMD-A-GTLIMSG------FKAERVLQAVKTITEEH-DNNKRTQGLVPDYN---EAGLVSKKILRIVLSYVD 375 (385)
T ss_dssp H---HHH-H-TCCEECC------SSHHHHHHHHHHHHTTC-BTTBCCSCCCHHHH---TCCCHHHHHHHHHHHHHH
T ss_pred h---hhh-c-CceEEcC------CCHHHHHHHHHHHHhCh-HHHHHhhccCCCCC---CCChHHHHHHHHHHHHhh
Confidence 2 233 5 8887665 37999999999999986 32211111011110 356667777666666543
|
| >2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A* | Back alignment and structure |
|---|
Probab=99.08 E-value=7.2e-09 Score=100.59 Aligned_cols=145 Identities=14% Similarity=0.211 Sum_probs=92.9
Q ss_pred hhHHHhcCCCCCcEEEEEeCCcccCCHHHHHHHHHHHHhCCC----c-EEEEEeCCCccCCcccCCCCchhhHH---hhc
Q 042753 262 DVLTWLDSRRDESVVYVCFGSRYVLTAKQIHELAAALEKTDV----D-FVYCVREPDERHASQDCGVLPDGFED---RVA 333 (473)
Q Consensus 262 ~~~~~l~~~~~~~~V~vs~Gs~~~~~~~~~~~~~~al~~~~~----~-~i~~~~~~~~~~~~~~~~~lp~~~~~---~~~ 333 (473)
.+.+.+.- .+++.+++..|+... ......++++++.... . -++.++... + +.+.+ +..
T Consensus 185 ~~~~~~~~-~~~~~~i~~~G~~~~--~K~~~~li~a~~~l~~~~~~~~~l~i~G~g~--------~---~~~~~~~~~~~ 250 (374)
T 2iw1_A 185 IYRQKNGI-KEQQNLLLQVGSDFG--RKGVDRSIEALASLPESLRHNTLLFVVGQDK--------P---RKFEALAEKLG 250 (374)
T ss_dssp HHHHHTTC-CTTCEEEEEECSCTT--TTTHHHHHHHHHTSCHHHHHTEEEEEESSSC--------C---HHHHHHHHHHT
T ss_pred HHHHHhCC-CCCCeEEEEeccchh--hcCHHHHHHHHHHhHhccCCceEEEEEcCCC--------H---HHHHHHHHHcC
Confidence 34444433 245567778888753 2334556677765432 2 334445431 1 22322 222
Q ss_pred -CCCeEeecCccH-HHhhhccCccceee----ccCchhHHHHHhhCCeEecCcccccchhhHHHHHHHhcceEEeccCCC
Q 042753 334 -GRGYVIRGWSQQ-VAILRHKAVGAFLT----HCGWNSVLEGVSAGVVMLTWPMDADQYTNAQLLVDQLGVGIRVGEGTR 407 (473)
Q Consensus 334 -~~nv~v~~~~pq-~~lL~~~~v~~~It----HgG~~s~~eal~~GvP~l~~P~~~DQ~~na~rv~~~~G~G~~l~~~~~ 407 (473)
.+++.+.++..+ .+++..+++ +|. -|..+++.||+++|+|+|+.+. ..+...+.+. +.|..+.
T Consensus 251 ~~~~v~~~g~~~~~~~~~~~ad~--~v~ps~~e~~~~~~~Ea~a~G~Pvi~~~~----~~~~e~i~~~-~~g~~~~---- 319 (374)
T 2iw1_A 251 VRSNVHFFSGRNDVSELMAAADL--LLHPAYQEAAGIVLLEAITAGLPVLTTAV----CGYAHYIADA-NCGTVIA---- 319 (374)
T ss_dssp CGGGEEEESCCSCHHHHHHHCSE--EEECCSCCSSCHHHHHHHHHTCCEEEETT----STTTHHHHHH-TCEEEEC----
T ss_pred CCCcEEECCCcccHHHHHHhcCE--EEeccccCCcccHHHHHHHCCCCEEEecC----CCchhhhccC-CceEEeC----
Confidence 357888787654 558888997 665 5677899999999999999754 3456667644 7898885
Q ss_pred CCCCHHHHHHHHHHHhCCcHHHHHH
Q 042753 408 NIPESDELARLLAQSVDGPRRERLK 432 (473)
Q Consensus 408 ~~~~~~~l~~~i~~~l~~~~~~~~~ 432 (473)
..-+.+++.++|.++++|+ ..+++
T Consensus 320 ~~~~~~~l~~~i~~l~~~~-~~~~~ 343 (374)
T 2iw1_A 320 EPFSQEQLNEVLRKALTQS-PLRMA 343 (374)
T ss_dssp SSCCHHHHHHHHHHHHHCH-HHHHH
T ss_pred CCCCHHHHHHHHHHHHcCh-HHHHH
Confidence 2357999999999999987 44433
|
| >2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A* | Back alignment and structure |
|---|
Probab=98.95 E-value=2.2e-07 Score=91.66 Aligned_cols=111 Identities=14% Similarity=0.074 Sum_probs=73.8
Q ss_pred CCCeEeecCcc---H---HHhhhccCccceeecc----CchhHHHHHhhCCeEecCcccccchhhHHHHHHHhcceEEec
Q 042753 334 GRGYVIRGWSQ---Q---VAILRHKAVGAFLTHC----GWNSVLEGVSAGVVMLTWPMDADQYTNAQLLVDQLGVGIRVG 403 (473)
Q Consensus 334 ~~nv~v~~~~p---q---~~lL~~~~v~~~ItHg----G~~s~~eal~~GvP~l~~P~~~DQ~~na~rv~~~~G~G~~l~ 403 (473)
.+++.+.+|++ + .+++..+++ +|.-+ ..+++.||+++|+|+|+.+. ..+...+.+. +.|...+
T Consensus 292 ~~~V~~~G~~~~~~~~~~~~~~~~ad~--~v~ps~~E~~~~~~lEAma~G~PvI~~~~----~g~~e~i~~~-~~g~l~~ 364 (416)
T 2x6q_A 292 DYDVKVLTNLIGVHAREVNAFQRASDV--ILQMSIREGFGLTVTEAMWKGKPVIGRAV----GGIKFQIVDG-ETGFLVR 364 (416)
T ss_dssp CTTEEEEEGGGTCCHHHHHHHHHHCSE--EEECCSSCSSCHHHHHHHHTTCCEEEESC----HHHHHHCCBT-TTEEEES
T ss_pred CCcEEEecccCCCCHHHHHHHHHhCCE--EEECCCcCCCccHHHHHHHcCCCEEEccC----CCChhheecC-CCeEEEC
Confidence 46888888775 2 347788887 66543 46789999999999999764 3445555422 5676553
Q ss_pred cCCCCCCCHHHHHHHHHHHhCCcHHHHHHHHH-HHHHHHHHHhcCCChHHHHHHHHHHHHh
Q 042753 404 EGTRNIPESDELARLLAQSVDGPRRERLKARE-LSGAALSAVVKGGSSDRDLNDFIKRINE 463 (473)
Q Consensus 404 ~~~~~~~~~~~l~~~i~~~l~~~~~~~~~a~~-~~~~~~~~~~~~gs~~~~~~~~~~~~~~ 463 (473)
+.+++.++|.++++|+ ..+++..+ -++.+ .+.-+.+..++++++.+.+
T Consensus 365 -------d~~~la~~i~~ll~~~-~~~~~~~~~a~~~~----~~~fs~~~~~~~~~~~~~~ 413 (416)
T 2x6q_A 365 -------DANEAVEVVLYLLKHP-EVSKEMGAKAKERV----RKNFIITKHMERYLDILNS 413 (416)
T ss_dssp -------SHHHHHHHHHHHHHCH-HHHHHHHHHHHHHH----HHHTBHHHHHHHHHHHHHT
T ss_pred -------CHHHHHHHHHHHHhCH-HHHHHHHHHHHHHH----HHHcCHHHHHHHHHHHHHH
Confidence 7899999999999987 44333222 12222 2234567777777777665
|
| >2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A* | Back alignment and structure |
|---|
Probab=98.92 E-value=1.4e-08 Score=97.41 Aligned_cols=149 Identities=17% Similarity=0.083 Sum_probs=92.1
Q ss_pred EEEEeCCcccCCHHHHHHHHHHHHhCCCcEEEEEeCCCccCCcccCCCCchh---hHHhhcCCCeEeecCccHH---Hhh
Q 042753 276 VYVCFGSRYVLTAKQIHELAAALEKTDVDFVYCVREPDERHASQDCGVLPDG---FEDRVAGRGYVIRGWSQQV---AIL 349 (473)
Q Consensus 276 V~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~lp~~---~~~~~~~~nv~v~~~~pq~---~lL 349 (473)
+++..|+... .+....++++++..+.++++ ++... ..+. +.++.. +++.+.+|+++. +++
T Consensus 164 ~i~~vG~~~~--~Kg~~~li~a~~~~~~~l~i-~G~g~----------~~~~l~~~~~~~~-~~v~~~g~~~~~~l~~~~ 229 (342)
T 2iuy_A 164 FLLFMGRVSP--HKGALEAAAFAHACGRRLVL-AGPAW----------EPEYFDEITRRYG-STVEPIGEVGGERRLDLL 229 (342)
T ss_dssp CEEEESCCCG--GGTHHHHHHHHHHHTCCEEE-ESCCC----------CHHHHHHHHHHHT-TTEEECCCCCHHHHHHHH
T ss_pred EEEEEecccc--ccCHHHHHHHHHhcCcEEEE-EeCcc----------cHHHHHHHHHHhC-CCEEEeccCCHHHHHHHH
Confidence 4555687752 33345566777666666554 44321 1122 222333 789999999975 688
Q ss_pred hccCccceee--------------ccCchhHHHHHhhCCeEecCcccccchhhHHHHHH--HhcceEEeccCCCCCCCHH
Q 042753 350 RHKAVGAFLT--------------HCGWNSVLEGVSAGVVMLTWPMDADQYTNAQLLVD--QLGVGIRVGEGTRNIPESD 413 (473)
Q Consensus 350 ~~~~v~~~It--------------HgG~~s~~eal~~GvP~l~~P~~~DQ~~na~rv~~--~~G~G~~l~~~~~~~~~~~ 413 (473)
..+++ +|. -|-.+++.||+++|+|+|+... ..+...+.+ . +.|...+ . +.+
T Consensus 230 ~~adv--~v~ps~~~~~~~~~~~~E~~~~~~~EAma~G~PvI~s~~----~~~~e~~~~~~~-~~g~~~~-----~-d~~ 296 (342)
T 2iuy_A 230 ASAHA--VLAMSQAVTGPWGGIWCEPGATVVSEAAVSGTPVVGTGN----GCLAEIVPSVGE-VVGYGTD-----F-APD 296 (342)
T ss_dssp HHCSE--EEECCCCCCCTTCSCCCCCCCHHHHHHHHTTCCEEECCT----TTHHHHGGGGEE-ECCSSSC-----C-CHH
T ss_pred HhCCE--EEECCcccccccccccccCccHHHHHHHhcCCCEEEcCC----CChHHHhcccCC-CceEEcC-----C-CHH
Confidence 88997 552 2334689999999999999865 335555543 2 4565554 4 899
Q ss_pred HHHHHHHHHhCCcHHHHHHHHHHH-HHHHHHHhcCCChHHHHHHHHHHHHhh
Q 042753 414 ELARLLAQSVDGPRRERLKARELS-GAALSAVVKGGSSDRDLNDFIKRINEL 464 (473)
Q Consensus 414 ~l~~~i~~~l~~~~~~~~~a~~~~-~~~~~~~~~~gs~~~~~~~~~~~~~~~ 464 (473)
++.++|.++++ .+++++.. +.+ +.+..++++++.+.+.
T Consensus 297 ~l~~~i~~l~~-----~~~~~~~~~~~~--------s~~~~~~~~~~~~~~~ 335 (342)
T 2iuy_A 297 EARRTLAGLPA-----SDEVRRAAVRLW--------GHVTIAERYVEQYRRL 335 (342)
T ss_dssp HHHHHHHTSCC-----HHHHHHHHHHHH--------BHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHH-----HHHHHHHHHHhc--------CHHHHHHHHHHHHHHH
Confidence 99999999986 33333332 222 2455556666655554
|
| >1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A | Back alignment and structure |
|---|
Probab=98.68 E-value=5.9e-06 Score=83.08 Aligned_cols=168 Identities=10% Similarity=0.048 Sum_probs=98.9
Q ss_pred cEEEEEeCCccc-CCHHHHHHHHHHHHhCCCcEEEEEeCCCccCCcccCCCCchhhHHhhc--CCCeE-eecCccH--HH
Q 042753 274 SVVYVCFGSRYV-LTAKQIHELAAALEKTDVDFVYCVREPDERHASQDCGVLPDGFEDRVA--GRGYV-IRGWSQQ--VA 347 (473)
Q Consensus 274 ~~V~vs~Gs~~~-~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~lp~~~~~~~~--~~nv~-v~~~~pq--~~ 347 (473)
..+++..|.... ...+.+.+.+..+.+.+.+++++ +... +..-+.+.+... ..+++ ..++... ..
T Consensus 291 ~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~l~iv-G~g~--------~~~~~~l~~~~~~~~~~v~~~~g~~~~~~~~ 361 (485)
T 1rzu_A 291 SPLFCVISRLTWQKGIDLMAEAVDEIVSLGGRLVVL-GAGD--------VALEGALLAAASRHHGRVGVAIGYNEPLSHL 361 (485)
T ss_dssp SCEEEEESCBSTTTTHHHHHTTHHHHHHTTCEEEEE-ECBC--------HHHHHHHHHHHHHTTTTEEEEESCCHHHHHH
T ss_pred CeEEEEEccCccccCHHHHHHHHHHHHhcCceEEEE-eCCc--------hHHHHHHHHHHHhCCCcEEEecCCCHHHHHH
Confidence 347788888854 23344444444444445555544 4321 011122222211 35776 5777433 25
Q ss_pred hhhccCccceee----ccCchhHHHHHhhCCeEecCcccccchhhHHHHHHHh---------cceEEeccCCCCCCCHHH
Q 042753 348 ILRHKAVGAFLT----HCGWNSVLEGVSAGVVMLTWPMDADQYTNAQLLVDQL---------GVGIRVGEGTRNIPESDE 414 (473)
Q Consensus 348 lL~~~~v~~~It----HgG~~s~~eal~~GvP~l~~P~~~DQ~~na~rv~~~~---------G~G~~l~~~~~~~~~~~~ 414 (473)
++..+++ +|. -|...+++||+++|+|+|+... ......+. .- +.|..++ .-+.++
T Consensus 362 ~~~~adv--~v~pS~~E~~~~~~lEAma~G~PvI~s~~----gg~~e~v~-~~~~~~~~~~~~~G~l~~-----~~d~~~ 429 (485)
T 1rzu_A 362 MQAGCDA--IIIPSRFEPCGLTQLYALRYGCIPVVART----GGLADTVI-DANHAALASKAATGVQFS-----PVTLDG 429 (485)
T ss_dssp HHHHCSE--EEECCSCCSSCSHHHHHHHHTCEEEEESS----HHHHHHCC-BCCHHHHHTTCCCBEEES-----SCSHHH
T ss_pred HHhcCCE--EEECcccCCCCHHHHHHHHCCCCEEEeCC----CChhheec-ccccccccccCCcceEeC-----CCCHHH
Confidence 7888997 663 3445689999999999999754 23333333 31 3677776 347899
Q ss_pred HHHHHHHHh---CCcHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHhhccCCC
Q 042753 415 LARLLAQSV---DGPRRERLKARELSGAALSAVVKGGSSDRDLNDFIKRINELKSGKN 469 (473)
Q Consensus 415 l~~~i~~~l---~~~~~~~~~a~~~~~~~~~~~~~~gs~~~~~~~~~~~~~~~~~~~~ 469 (473)
+.++|.+++ +|+ ..+++. ++..+ +..-+.+..++++++...+..+.++
T Consensus 430 la~~i~~ll~~~~~~-~~~~~~---~~~~~---~~~fs~~~~~~~~~~~y~~~~~~~~ 480 (485)
T 1rzu_A 430 LKQAIRRTVRYYHDP-KLWTQM---QKLGM---KSDVSWEKSAGLYAALYSQLISKGH 480 (485)
T ss_dssp HHHHHHHHHHHHTCH-HHHHHH---HHHHH---TCCCBHHHHHHHHHHHHHHHTC---
T ss_pred HHHHHHHHHHHhCCH-HHHHHH---HHHHH---HHhCChHHHHHHHHHHHHHhhCCCC
Confidence 999999999 675 444332 22222 2456778888888888887755544
|
| >3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A* | Back alignment and structure |
|---|
Probab=98.63 E-value=2.9e-06 Score=89.67 Aligned_cols=113 Identities=14% Similarity=0.128 Sum_probs=69.9
Q ss_pred CCeEeec----CccHHHhhh----ccCccceee----ccCchhHHHHHhhCCeEecCcccccchhhHHHHHHHhcceEEe
Q 042753 335 RGYVIRG----WSQQVAILR----HKAVGAFLT----HCGWNSVLEGVSAGVVMLTWPMDADQYTNAQLLVDQLGVGIRV 402 (473)
Q Consensus 335 ~nv~v~~----~~pq~~lL~----~~~v~~~It----HgG~~s~~eal~~GvP~l~~P~~~DQ~~na~rv~~~~G~G~~l 402 (473)
++|...+ ++|+.++.. .+++ ||. -|-..++.||+++|+|+|+. |-......+.+. +.|..+
T Consensus 640 ~~V~flG~~~~~v~~~eL~~~~~~aaDv--fV~PS~~EgfglvllEAMA~G~PVIas----d~GG~~EiV~dg-~~Gllv 712 (816)
T 3s28_A 640 GQFRWISSQMDRVRNGELYRYICDTKGA--FVQPALYEAFGLTVVEAMTCGLPTFAT----CKGGPAEIIVHG-KSGFHI 712 (816)
T ss_dssp BBEEEECCCCCHHHHHHHHHHHHHTTCE--EEECCSCBSSCHHHHHHHHTTCCEEEE----SSBTHHHHCCBT-TTBEEE
T ss_pred CcEEEccCccccCCHHHHHHHHHhcCeE--EEECCCccCccHHHHHHHHcCCCEEEe----CCCChHHHHccC-CcEEEe
Confidence 5677776 445555544 3455 663 24456999999999999996 444455555423 578888
Q ss_pred ccCCCCCCCHHHHHHHHHHHh----CCcHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHh
Q 042753 403 GEGTRNIPESDELARLLAQSV----DGPRRERLKARELSGAALSAVVKGGSSDRDLNDFIKRINE 463 (473)
Q Consensus 403 ~~~~~~~~~~~~l~~~i~~~l----~~~~~~~~~a~~~~~~~~~~~~~~gs~~~~~~~~~~~~~~ 463 (473)
+ .-+.+++.++|.+++ .|+ ..+++. ++..++.+...-+-+..++++++..++
T Consensus 713 ~-----p~D~e~LA~aI~~lL~~Ll~d~-~~~~~m---~~~ar~~a~~~fSwe~~a~~ll~lY~~ 768 (816)
T 3s28_A 713 D-----PYHGDQAADTLADFFTKCKEDP-SHWDEI---SKGGLQRIEEKYTWQIYSQRLLTLTGV 768 (816)
T ss_dssp C-----TTSHHHHHHHHHHHHHHHHHCT-HHHHHH---HHHHHHHHHHSCCHHHHHHHHHHHHHH
T ss_pred C-----CCCHHHHHHHHHHHHHHhccCH-HHHHHH---HHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 7 347899999997776 676 433322 222222223445666677777665554
|
| >3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A* | Back alignment and structure |
|---|
Probab=98.58 E-value=1e-05 Score=79.42 Aligned_cols=170 Identities=14% Similarity=0.063 Sum_probs=98.1
Q ss_pred CcEEEEEeCCccc-CCHHHHHHHHHHHH-h-CCCcEEEEEeCCCccCCcccCCCCchhhHH---hhc-CCC-------eE
Q 042753 273 ESVVYVCFGSRYV-LTAKQIHELAAALE-K-TDVDFVYCVREPDERHASQDCGVLPDGFED---RVA-GRG-------YV 338 (473)
Q Consensus 273 ~~~V~vs~Gs~~~-~~~~~~~~~~~al~-~-~~~~~i~~~~~~~~~~~~~~~~~lp~~~~~---~~~-~~n-------v~ 338 (473)
+..+++..|.... ...+.+-+.+..+. + .+.+++++-.... .....+.+.+.+ +.. ..+ +.
T Consensus 183 ~~~~il~vGr~~~~Kg~~~li~a~~~l~~~~~~~~l~ivG~g~~-----~~~~~l~~~~~~~~~~~~l~~~v~~l~~vv~ 257 (413)
T 3oy2_A 183 DDVLFLNMNRNTARKRLDIYVLAAARFISKYPDAKVRFLCNSHH-----ESKFDLHSIALRELVASGVDNVFTHLNKIMI 257 (413)
T ss_dssp TSEEEECCSCSSGGGTHHHHHHHHHHHHHHCTTCCEEEEEECCT-----TCSCCHHHHHHHHHHHHTCSCHHHHHTTEEE
T ss_pred CceEEEEcCCCchhcCcHHHHHHHHHHHHhCCCcEEEEEeCCcc-----cchhhHHHHHHHHHHHcCcccccccccceee
Confidence 5678888888643 23333333333332 2 3566665544431 000111122222 122 222 66
Q ss_pred eecCccHHH---hhhccCccceee----ccCchhHHHHHhhCCeEecCcccccchhhHHHHHHHhcc-------------
Q 042753 339 IRGWSQQVA---ILRHKAVGAFLT----HCGWNSVLEGVSAGVVMLTWPMDADQYTNAQLLVDQLGV------------- 398 (473)
Q Consensus 339 v~~~~pq~~---lL~~~~v~~~It----HgG~~s~~eal~~GvP~l~~P~~~DQ~~na~rv~~~~G~------------- 398 (473)
+.+|+|+.+ ++..+++ +|. -|...++.||+++|+|+|+... ......+. . |.
T Consensus 258 ~~g~~~~~~~~~~~~~adv--~v~pS~~E~~~~~~lEAma~G~PvI~s~~----~g~~e~v~-~-~~~~~i~~~~~~~~~ 329 (413)
T 3oy2_A 258 NRTVLTDERVDMMYNACDV--IVNCSSGEGFGLCSAEGAVLGKPLIISAV----GGADDYFS-G-DCVYKIKPSAWISVD 329 (413)
T ss_dssp ECSCCCHHHHHHHHHHCSE--EEECCSCCSSCHHHHHHHTTTCCEEEECC----HHHHHHSC-T-TTSEEECCCEEEECT
T ss_pred ccCcCCHHHHHHHHHhCCE--EEeCCCcCCCCcHHHHHHHcCCCEEEcCC----CChHHHHc-c-Ccccccccccccccc
Confidence 779998544 6788887 553 3445689999999999998653 33444443 2 33
Q ss_pred ---eE--EeccCCCCCCCHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHhhc
Q 042753 399 ---GI--RVGEGTRNIPESDELARLLAQSVDGPRRERLKARELSGAALSAVVKGGSSDRDLNDFIKRINELK 465 (473)
Q Consensus 399 ---G~--~l~~~~~~~~~~~~l~~~i~~~l~~~~~~~~~a~~~~~~~~~~~~~~gs~~~~~~~~~~~~~~~~ 465 (473)
|. .+. .-+.+++.++| ++++|+ ..+++. ++..++.+...-+.+..++++++.+++.-
T Consensus 330 ~~~G~~gl~~-----~~d~~~la~~i-~l~~~~-~~~~~~---~~~a~~~~~~~fs~~~~~~~~~~~~~~~~ 391 (413)
T 3oy2_A 330 DRDGIGGIEG-----IIDVDDLVEAF-TFFKDE-KNRKEY---GKRVQDFVKTKPTWDDISSDIIDFFNSLL 391 (413)
T ss_dssp TTCSSCCEEE-----ECCHHHHHHHH-HHTTSH-HHHHHH---HHHHHHHHTTSCCHHHHHHHHHHHHHHHT
T ss_pred cccCcceeeC-----CCCHHHHHHHH-HHhcCH-HHHHHH---HHHHHHHHHHhCCHHHHHHHHHHHHHHHH
Confidence 44 444 23899999999 999987 544333 23333222445678888888888887764
|
| >2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A* | Back alignment and structure |
|---|
Probab=98.55 E-value=6.1e-05 Score=77.25 Aligned_cols=117 Identities=15% Similarity=0.058 Sum_probs=76.6
Q ss_pred CCeEeecCccHH---HhhhccCccceee---ccCchhHHHHHhhCCeEecCcccccchhh-HHHHHHHhcceEEeccCCC
Q 042753 335 RGYVIRGWSQQV---AILRHKAVGAFLT---HCGWNSVLEGVSAGVVMLTWPMDADQYTN-AQLLVDQLGVGIRVGEGTR 407 (473)
Q Consensus 335 ~nv~v~~~~pq~---~lL~~~~v~~~It---HgG~~s~~eal~~GvP~l~~P~~~DQ~~n-a~rv~~~~G~G~~l~~~~~ 407 (473)
++|++.+++|+. .++..+++ ||. .|+.+++.||+++|+|+|+.|-..=.-+. +..+. ..|+.-.+. .
T Consensus 434 ~~v~~~g~~~~~~~~~~~~~adv--~v~ps~~~~g~~~lEAma~G~Pvv~~~g~~~~s~~~~~~l~-~~g~~e~v~---~ 507 (568)
T 2vsy_A 434 QRLVFMPKLPHPQYLARYRHADL--FLDTHPYNAHTTASDALWTGCPVLTTPGETFAARVAGSLNH-HLGLDEMNV---A 507 (568)
T ss_dssp GGEEEECCCCHHHHHHHGGGCSE--EECCSSSCCSHHHHHHHHTTCCEEBCCCSSGGGSHHHHHHH-HHTCGGGBC---S
T ss_pred hHEEeeCCCCHHHHHHHHhcCCE--EeeCCCCCCcHHHHHHHhCCCCEEeccCCCchHHHHHHHHH-HCCChhhhc---C
Confidence 678889999854 46788887 651 26778999999999999997643111122 23344 336665554 2
Q ss_pred CCCCHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHH--hcCCChHHHHHHHHHHHHhh
Q 042753 408 NIPESDELARLLAQSVDGPRRERLKARELSGAALSAV--VKGGSSDRDLNDFIKRINEL 464 (473)
Q Consensus 408 ~~~~~~~l~~~i~~~l~~~~~~~~~a~~~~~~~~~~~--~~~gs~~~~~~~~~~~~~~~ 464 (473)
+.+++.++|.++++|+ ..+++. ++..++.+ ...-+.+..++++++.+.+.
T Consensus 508 ---~~~~la~~i~~l~~~~-~~~~~~---~~~~~~~~~~~~~f~~~~~~~~~~~~y~~~ 559 (568)
T 2vsy_A 508 ---DDAAFVAKAVALASDP-AALTAL---HARVDVLRRASGVFHMDGFADDFGALLQAL 559 (568)
T ss_dssp ---SHHHHHHHHHHHHHCH-HHHHHH---HHHHHHHHHHSSTTCHHHHHHHHHHHHHHH
T ss_pred ---CHHHHHHHHHHHhcCH-HHHHHH---HHHHHHhhhcCCCCCHHHHHHHHHHHHHHH
Confidence 8999999999999987 544433 23333222 24456677777777666554
|
| >2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A | Back alignment and structure |
|---|
Probab=98.54 E-value=8e-05 Score=74.70 Aligned_cols=169 Identities=14% Similarity=0.061 Sum_probs=98.2
Q ss_pred CcEEEEEeCCccc-CCHHHHHHHHHHHHhCCCcEEEEEeCCCccCCcccCCCCchhhHHhhc--CCCeE-eecCccH--H
Q 042753 273 ESVVYVCFGSRYV-LTAKQIHELAAALEKTDVDFVYCVREPDERHASQDCGVLPDGFEDRVA--GRGYV-IRGWSQQ--V 346 (473)
Q Consensus 273 ~~~V~vs~Gs~~~-~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~lp~~~~~~~~--~~nv~-v~~~~pq--~ 346 (473)
+..+++..|.... ...+.+.+.+..+.+.+.+++++=.++ +..-+.+.+... ..++. ..++... .
T Consensus 291 ~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~l~ivG~g~---------~~~~~~l~~~~~~~~~~v~~~~g~~~~~~~ 361 (485)
T 2qzs_A 291 KVPLFAVVSRLTSQKGLDLVLEALPGLLEQGGQLALLGAGD---------PVLQEGFLAAAAEYPGQVGVQIGYHEAFSH 361 (485)
T ss_dssp TSCEEEEEEEESGGGCHHHHHHHHHHHHHTTCEEEEEEEEC---------HHHHHHHHHHHHHSTTTEEEEESCCHHHHH
T ss_pred CCeEEEEeccCccccCHHHHHHHHHHHhhCCcEEEEEeCCc---------hHHHHHHHHHHHhCCCcEEEeCCCCHHHHH
Confidence 4456677787743 233444444444444456655443331 001122322211 25675 6777433 3
Q ss_pred HhhhccCccceee----ccCchhHHHHHhhCCeEecCcccccchhhHHHHHHHh---------cceEEeccCCCCCCCHH
Q 042753 347 AILRHKAVGAFLT----HCGWNSVLEGVSAGVVMLTWPMDADQYTNAQLLVDQL---------GVGIRVGEGTRNIPESD 413 (473)
Q Consensus 347 ~lL~~~~v~~~It----HgG~~s~~eal~~GvP~l~~P~~~DQ~~na~rv~~~~---------G~G~~l~~~~~~~~~~~ 413 (473)
.++..+++ +|. -|...+++||+++|+|+|+... ......+. .- +.|..++ .-+.+
T Consensus 362 ~~~~~adv--~v~pS~~E~~g~~~lEAma~G~PvI~s~~----gg~~e~v~-~~~~~~~~~~~~~G~l~~-----~~d~~ 429 (485)
T 2qzs_A 362 RIMGGADV--ILVPSRFEPCGLTQLYGLKYGTLPLVRRT----GGLADTVS-DCSLENLADGVASGFVFE-----DSNAW 429 (485)
T ss_dssp HHHHHCSE--EEECCSCCSSCSHHHHHHHHTCEEEEESS----HHHHHHCC-BCCHHHHHTTCCCBEEEC-----SSSHH
T ss_pred HHHHhCCE--EEECCccCCCcHHHHHHHHCCCCEEECCC----CCccceec-cCccccccccccceEEEC-----CCCHH
Confidence 57888997 653 2445688999999999999754 23334343 31 3677776 34789
Q ss_pred HHHHHHHHHh---CCcHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHhhccCCC
Q 042753 414 ELARLLAQSV---DGPRRERLKARELSGAALSAVVKGGSSDRDLNDFIKRINELKSGKN 469 (473)
Q Consensus 414 ~l~~~i~~~l---~~~~~~~~~a~~~~~~~~~~~~~~gs~~~~~~~~~~~~~~~~~~~~ 469 (473)
++.++|.+++ +|+ ..+++.. +..+ +..-|-+..++++++.+.+.....+
T Consensus 430 ~la~~i~~ll~~~~~~-~~~~~~~---~~~~---~~~fs~~~~~~~~~~ly~~~~~~~~ 481 (485)
T 2qzs_A 430 SLLRAIRRAFVLWSRP-SLWRFVQ---RQAM---AMDFSWQVAAKSYRELYYRLKLEHH 481 (485)
T ss_dssp HHHHHHHHHHHHHTSH-HHHHHHH---HHHH---HCCCCHHHHHHHHHHHHHHHC----
T ss_pred HHHHHHHHHHHHcCCH-HHHHHHH---HHHH---hhcCCHHHHHHHHHHHHHHhhhhhc
Confidence 9999999999 675 4443322 2222 2456778888888888887755443
|
| >2xci_A KDO-transferase, 3-deoxy-D-manno-2-octulosonic acid transferase; KDTA, GSEA, glycosyltransferase superfamily B,; HET: PG4; 2.00A {Aquifex aeolicus} PDB: 2xcu_A* | Back alignment and structure |
|---|
Probab=98.35 E-value=0.00016 Score=69.91 Aligned_cols=95 Identities=17% Similarity=0.223 Sum_probs=67.5
Q ss_pred CeEeecCcc-HHHhhhccCccceee-----ccCchhHHHHHhhCCeEecCcccccchhhHHHHHHHhcceEEeccCCCCC
Q 042753 336 GYVIRGWSQ-QVAILRHKAVGAFLT-----HCGWNSVLEGVSAGVVMLTWPMDADQYTNAQLLVDQLGVGIRVGEGTRNI 409 (473)
Q Consensus 336 nv~v~~~~p-q~~lL~~~~v~~~It-----HgG~~s~~eal~~GvP~l~~P~~~DQ~~na~rv~~~~G~G~~l~~~~~~~ 409 (473)
++.+.++.. -..+++.+++ ++. -+|..+++||+++|+|+|+-|...+.......+.+. |.++...
T Consensus 261 ~v~~~~~~~dl~~~y~~aDv--~vl~ss~~e~gg~~~lEAmA~G~PVI~~~~~~~~~e~~~~~~~~-G~l~~~~------ 331 (374)
T 2xci_A 261 DVILVDRFGILKELYPVGKI--AIVGGTFVNIGGHNLLEPTCWGIPVIYGPYTHKVNDLKEFLEKE-GAGFEVK------ 331 (374)
T ss_dssp SEEECCSSSCHHHHGGGEEE--EEECSSSSSSCCCCCHHHHTTTCCEEECSCCTTSHHHHHHHHHT-TCEEECC------
T ss_pred cEEEECCHHHHHHHHHhCCE--EEECCcccCCCCcCHHHHHHhCCCEEECCCccChHHHHHHHHHC-CCEEEeC------
Confidence 455555443 3558888887 443 234578999999999999877777777777665535 7776654
Q ss_pred CCHHHHHHHHHHHhCCc--HHHHHHHHHHHHHH
Q 042753 410 PESDELARLLAQSVDGP--RRERLKARELSGAA 440 (473)
Q Consensus 410 ~~~~~l~~~i~~~l~~~--~~~~~~a~~~~~~~ 440 (473)
+.++|.++|.++++|+ ..|.+++++..+.-
T Consensus 332 -d~~~La~ai~~ll~d~~r~~mg~~ar~~~~~~ 363 (374)
T 2xci_A 332 -NETELVTKLTELLSVKKEIKVEEKSREIKGCY 363 (374)
T ss_dssp -SHHHHHHHHHHHHHSCCCCCHHHHHHHHHHHH
T ss_pred -CHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhc
Confidence 5789999999999763 36777777766554
|
| >2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8 | Back alignment and structure |
|---|
Probab=98.21 E-value=7e-06 Score=70.44 Aligned_cols=141 Identities=10% Similarity=0.076 Sum_probs=88.5
Q ss_pred cEEEEEeCCcccCCHHHHHHHHHHHHhC-CCcEEEEEeCCCccCCcccCCCCchhhH--HhhcCCCeEeecCccH---HH
Q 042753 274 SVVYVCFGSRYVLTAKQIHELAAALEKT-DVDFVYCVREPDERHASQDCGVLPDGFE--DRVAGRGYVIRGWSQQ---VA 347 (473)
Q Consensus 274 ~~V~vs~Gs~~~~~~~~~~~~~~al~~~-~~~~i~~~~~~~~~~~~~~~~~lp~~~~--~~~~~~nv~v~~~~pq---~~ 347 (473)
..+++..|+... ...+..+++++++. +.+++++-.... .+.+-+... +.-..+|+.+.+|+++ ..
T Consensus 23 ~~~i~~~G~~~~--~Kg~~~li~a~~~l~~~~l~i~G~~~~-------~~~l~~~~~~~~~~l~~~v~~~g~~~~~e~~~ 93 (177)
T 2f9f_A 23 GDFWLSVNRIYP--EKRIELQLEVFKKLQDEKLYIVGWFSK-------GDHAERYARKIMKIAPDNVKFLGSVSEEELID 93 (177)
T ss_dssp CSCEEEECCSSG--GGTHHHHHHHHHHCTTSCEEEEBCCCT-------TSTHHHHHHHHHHHSCTTEEEEESCCHHHHHH
T ss_pred CCEEEEEecccc--ccCHHHHHHHHHhCCCcEEEEEecCcc-------HHHHHHHHHhhhcccCCcEEEeCCCCHHHHHH
Confidence 345567788753 33455677777776 456555433321 011222111 1112468999999997 56
Q ss_pred hhhccCccceee---c-cCchhHHHHHhhCCeEecCcccccchhhHHHHHHHhcceEEeccCCCCCCCHHHHHHHHHHHh
Q 042753 348 ILRHKAVGAFLT---H-CGWNSVLEGVSAGVVMLTWPMDADQYTNAQLLVDQLGVGIRVGEGTRNIPESDELARLLAQSV 423 (473)
Q Consensus 348 lL~~~~v~~~It---H-gG~~s~~eal~~GvP~l~~P~~~DQ~~na~rv~~~~G~G~~l~~~~~~~~~~~~l~~~i~~~l 423 (473)
++..+++ +|. + |...++.||+++|+|+|+... ..+...+.+. +.|..+. -+.+++.++|.+++
T Consensus 94 ~~~~adi--~v~ps~~e~~~~~~~Eama~G~PvI~~~~----~~~~e~i~~~-~~g~~~~------~d~~~l~~~i~~l~ 160 (177)
T 2f9f_A 94 LYSRCKG--LLCTAKDEDFGLTPIEAMASGKPVIAVNE----GGFKETVINE-KTGYLVN------ADVNEIIDAMKKVS 160 (177)
T ss_dssp HHHHCSE--EEECCSSCCSCHHHHHHHHTTCCEEEESS----HHHHHHCCBT-TTEEEEC------SCHHHHHHHHHHHH
T ss_pred HHHhCCE--EEeCCCcCCCChHHHHHHHcCCcEEEeCC----CCHHHHhcCC-CccEEeC------CCHHHHHHHHHHHH
Confidence 8888997 554 2 334599999999999999753 4445555422 5676653 46899999999999
Q ss_pred CCcHHH-HHHHHHHH
Q 042753 424 DGPRRE-RLKARELS 437 (473)
Q Consensus 424 ~~~~~~-~~~a~~~~ 437 (473)
+|+ .. ++++++.+
T Consensus 161 ~~~-~~~~~~~~~~a 174 (177)
T 2f9f_A 161 KNP-DKFKKDCFRRA 174 (177)
T ss_dssp HCT-TTTHHHHHHHH
T ss_pred hCH-HHHHHHHHHHH
Confidence 887 43 55555443
|
| >2hy7_A Glucuronosyltransferase GUMK; glycosyltransferases, xanthan, membrane-associated proteins; 1.90A {Xanthomonas campestris} PDB: 2q6v_A* 3cv3_A* 3cuy_A* | Back alignment and structure |
|---|
Probab=97.99 E-value=0.001 Score=65.02 Aligned_cols=75 Identities=11% Similarity=0.085 Sum_probs=56.8
Q ss_pred CCCeEeecCccHHH---hhhccCccceee---c-cCchhHHHHH-------hhCCeEecCcccccchhhHHHHHHHhcce
Q 042753 334 GRGYVIRGWSQQVA---ILRHKAVGAFLT---H-CGWNSVLEGV-------SAGVVMLTWPMDADQYTNAQLLVDQLGVG 399 (473)
Q Consensus 334 ~~nv~v~~~~pq~~---lL~~~~v~~~It---H-gG~~s~~eal-------~~GvP~l~~P~~~DQ~~na~rv~~~~G~G 399 (473)
.++|.+.+++|+.+ ++..+++ +|. . |-.+++.||+ ++|+|+|+... +.+. ..|
T Consensus 264 ~~~V~f~G~~~~~~l~~~~~~adv--~v~ps~~E~~~~~~lEAm~Kl~eYla~G~PVIas~~----------v~~~-~~G 330 (406)
T 2hy7_A 264 GDNVIVYGEMKHAQTIGYIKHARF--GIAPYASEQVPVYLADSSMKLLQYDFFGLPAVCPNA----------VVGP-YKS 330 (406)
T ss_dssp CTTEEEECCCCHHHHHHHHHTCSE--EECCBSCSCCCTTHHHHCHHHHHHHHHTCCEEEEGG----------GTCS-CSS
T ss_pred CCCEEEcCCCCHHHHHHHHHhcCE--EEECCCcccCchHHHHHHHHHHHHhhCCCcEEEehh----------cccC-cce
Confidence 36889999998654 6788887 553 2 3346789999 99999999755 4422 457
Q ss_pred EE-eccCCCCCCCHHHHHHHHHHHhCCc
Q 042753 400 IR-VGEGTRNIPESDELARLLAQSVDGP 426 (473)
Q Consensus 400 ~~-l~~~~~~~~~~~~l~~~i~~~l~~~ 426 (473)
.. +. .-+.+++.++|.++++|+
T Consensus 331 ~l~v~-----~~d~~~la~ai~~ll~~~ 353 (406)
T 2hy7_A 331 RFGYT-----PGNADSVIAAITQALEAP 353 (406)
T ss_dssp EEEEC-----TTCHHHHHHHHHHHHHCC
T ss_pred EEEeC-----CCCHHHHHHHHHHHHhCc
Confidence 77 66 347899999999999987
|
| >3tov_A Glycosyl transferase family 9; structural genomics, PSI-BIOL protein structure initiative, midwest center for structural genomics, MCSG; 2.98A {Veillonella parvula} | Back alignment and structure |
|---|
Probab=97.73 E-value=0.00068 Score=64.79 Aligned_cols=105 Identities=13% Similarity=0.062 Sum_probs=73.7
Q ss_pred CccEEEEEcCCCCCChHHHHHHHHHHHhC--CCeEEEEeCCCChhhhhhhccCCCCCCee-EEEcCCCCCCCCCChhhHH
Q 042753 4 AGAHILVYPFPTSGHIIPLLDLTNRLLTL--GLNVTVLITQNNLPLLDSLNANHPSTSLQ-SLVLPQPKWPAGSPATRLL 80 (473)
Q Consensus 4 ~~~~Il~~~~~~~GH~~p~l~La~~L~~r--Gh~Vt~~~~~~~~~~i~~~~~~~~~~~~~-f~~l~~~~~~~~~~~~~~~ 80 (473)
.++|||++-..+.|++.-+.++.+.|+++ +.+|++++.+.+.+.++.. +.++ ++.++.. ....
T Consensus 7 ~~~~iLvi~~~~lGD~i~~~P~l~~L~~~~P~a~I~~l~~~~~~~l~~~~------p~vd~vi~~~~~--------~~~~ 72 (349)
T 3tov_A 7 DYKRIVVTFLMHLGDVILTTPFLEVLRKAAPHSHITYVIDEKLQQVMEYN------PNIDELIVVDKK--------GRHN 72 (349)
T ss_dssp TTCEEEEECCCCHHHHHTTHHHHHHHHHHCTTSEEEEEEEGGGGGGTSSC------TTCSEEEEECCS--------SHHH
T ss_pred CCCEEEEEecCcccHHHHHHHHHHHHHHHCCCCEEEEEECcchhHHHhcC------CCccEEEEeCcc--------cccc
Confidence 47899999999999999999999999997 9999999999887776654 4554 5544421 1001
Q ss_pred HHHHHHHHHhhHHHHHHHhcCCCCC-cEEEeCCCcchHHHHHHHhCCCcEE
Q 042753 81 KFMRVLRELHYPALLDWFKSHPSPP-VAILSDFFLGWTQGLAAELGLPRVV 130 (473)
Q Consensus 81 ~~~~~~~~~~~~~l~~~l~~~~~~p-D~VV~D~~~~~~~~~A~~~giP~v~ 130 (473)
.+ ..+ -.+.+.|+.. ++ |++|.=....-...++...|+|...
T Consensus 73 ~~-~~~-----~~l~~~Lr~~--~y~D~vidl~~~~rs~~l~~~~~a~~ri 115 (349)
T 3tov_A 73 SI-SGL-----NEVAREINAK--GKTDIVINLHPNERTSYLAWKIHAPITT 115 (349)
T ss_dssp HH-HHH-----HHHHHHHHHH--CCCCEEEECCCSHHHHHHHHHHCCSEEE
T ss_pred cH-HHH-----HHHHHHHhhC--CCCeEEEECCCChHHHHHHHHhCCCeEE
Confidence 11 111 1233445666 89 9999655545566778888999654
|
| >1psw_A ADP-heptose LPS heptosyltransferase II; structural genomics, NYSGXRC, LPS biosynthetic pathway, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.87.1.7 | Back alignment and structure |
|---|
Probab=97.63 E-value=0.0025 Score=60.69 Aligned_cols=103 Identities=15% Similarity=0.069 Sum_probs=67.4
Q ss_pred cEEEEEcCCCCCChHHHHHHHHHHHhC--CCeEEEEeCCCChhhhhhhccCCCCCCe-eEEEcCCCCCCCCCChhhHHHH
Q 042753 6 AHILVYPFPTSGHIIPLLDLTNRLLTL--GLNVTVLITQNNLPLLDSLNANHPSTSL-QSLVLPQPKWPAGSPATRLLKF 82 (473)
Q Consensus 6 ~~Il~~~~~~~GH~~p~l~La~~L~~r--Gh~Vt~~~~~~~~~~i~~~~~~~~~~~~-~f~~l~~~~~~~~~~~~~~~~~ 82 (473)
+||+++...+.|++.-..++.+.|+++ +.+|++++.+.+.+.++.. +.+ +++.++... .. ..+
T Consensus 1 mkILii~~~~~GD~i~~~p~l~~Lk~~~P~~~i~~l~~~~~~~l~~~~------p~i~~v~~~~~~~---~~--~~~--- 66 (348)
T 1psw_A 1 MKILVIGPSWVGDMMMSQSLYRTLQARYPQAIIDVMAPAWCRPLLSRM------PEVNEAIPMPLGH---GA--LEI--- 66 (348)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHHHSTTCEEEEEECGGGHHHHTTC------TTEEEEEEC------------CH---
T ss_pred CeEEEEeccccCHHHHHHHHHHHHHHHCCCCEEEEEECcchhHHHhcC------CccCEEEEecCCc---cc--cch---
Confidence 589999998889999999999999997 9999999998776655543 345 344443210 00 000
Q ss_pred HHHHHHHhhHHHHHHHhcCCCCCcEEEeCCCcchHHHHHHHhCCCcEE
Q 042753 83 MRVLRELHYPALLDWFKSHPSPPVAILSDFFLGWTQGLAAELGLPRVV 130 (473)
Q Consensus 83 ~~~~~~~~~~~l~~~l~~~~~~pD~VV~D~~~~~~~~~A~~~giP~v~ 130 (473)
.....+.+.+++. +||++|.=........++...|+|...
T Consensus 67 ------~~~~~l~~~l~~~--~~D~vid~~~~~~sa~~~~~~~~~~~i 106 (348)
T 1psw_A 67 ------GERRKLGHSLREK--RYDRAYVLPNSFKSALVPLFAGIPHRT 106 (348)
T ss_dssp ------HHHHHHHHHTTTT--TCSEEEECSCCSGGGHHHHHTTCSEEE
T ss_pred ------HHHHHHHHHHHhc--CCCEEEECCCChHHHHHHHHhCCCEEe
Confidence 1112344556666 899999322233456778888999743
|
| >4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A* | Back alignment and structure |
|---|
Probab=97.54 E-value=0.0017 Score=68.20 Aligned_cols=177 Identities=13% Similarity=0.120 Sum_probs=104.7
Q ss_pred CCCcEEEEEeCCcccCCHHHHHHHHHHHHhCCCcEEEEEeCCCccCCcccCCCCchhhHH-hhcCCCeEeecCccHHHhh
Q 042753 271 RDESVVYVCFGSRYVLTAKQIHELAAALEKTDVDFVYCVREPDERHASQDCGVLPDGFED-RVAGRGYVIRGWSQQVAIL 349 (473)
Q Consensus 271 ~~~~~V~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~lp~~~~~-~~~~~nv~v~~~~pq~~lL 349 (473)
++..+||.||.+.....++.+..-.+-|++.+.-++|....+... ...+-..+.+ .+..+.+++.+.+|..+-|
T Consensus 520 p~~~v~f~~fN~~~Ki~p~~~~~W~~IL~~vP~S~L~Ll~~~~~~-----~~~l~~~~~~~gi~~~r~~f~~~~~~~~~l 594 (723)
T 4gyw_A 520 PEDAIVYCNFNQLYKIDPSTLQMWANILKRVPNSVLWLLRFPAVG-----EPNIQQYAQNMGLPQNRIIFSPVAPKEEHV 594 (723)
T ss_dssp CTTSEEEECCSCGGGCCHHHHHHHHHHHHHCSSEEEEEEETTGGG-----HHHHHHHHHHTTCCGGGEEEEECCCHHHHH
T ss_pred CCCCEEEEeCCccccCCHHHHHHHHHHHHhCCCCeEEEEeCcHHH-----HHHHHHHHHhcCCCcCeEEECCCCCHHHHH
Confidence 456799999999999999999999999999999999998875310 0111111111 1123457778888866544
Q ss_pred ---hccCccceee---ccCchhHHHHHhhCCeEecCcccccchhh-HHHHHHHhcceEEeccCCCCCCCHHHHHHHHHHH
Q 042753 350 ---RHKAVGAFLT---HCGWNSVLEGVSAGVVMLTWPMDADQYTN-AQLLVDQLGVGIRVGEGTRNIPESDELARLLAQS 422 (473)
Q Consensus 350 ---~~~~v~~~It---HgG~~s~~eal~~GvP~l~~P~~~DQ~~n-a~rv~~~~G~G~~l~~~~~~~~~~~~l~~~i~~~ 422 (473)
..+++ ++- .+|.+|+.|||+.|||+|+++-..=--.. +..+. .+|+.-.+- -+.++-.+..-++
T Consensus 595 ~~~~~~Di--~LDt~p~~g~tT~~eal~~GvPvvt~~g~~~~sR~~~s~l~-~~gl~e~ia------~~~~~Y~~~a~~l 665 (723)
T 4gyw_A 595 RRGQLADV--CLDTPLCNGHTTGMDVLWAGTPMVTMPGETLASRVAASQLT-CLGCLELIA------KNRQEYEDIAVKL 665 (723)
T ss_dssp HHGGGCSE--EECCSSSCCSHHHHHHHHTTCCEEBCCCSSGGGTHHHHHHH-HHTCGGGBC------SSHHHHHHHHHHH
T ss_pred HHhCCCeE--EeCCCCcCCHHHHHHHHHcCCCEEEccCCCccHhHHHHHHH-HcCCccccc------CCHHHHHHHHHHH
Confidence 44665 654 78999999999999999999842211122 22333 446654443 2344444333355
Q ss_pred hCCcHHHHHHH-HHHHHHHHHHHhcCCChHHHHHHHHHHHHhh
Q 042753 423 VDGPRRERLKA-RELSGAALSAVVKGGSSDRDLNDFIKRINEL 464 (473)
Q Consensus 423 l~~~~~~~~~a-~~~~~~~~~~~~~~gs~~~~~~~~~~~~~~~ 464 (473)
-+|. ...+.. +++++.... .+--.....+..+++.+.++
T Consensus 666 a~d~-~~l~~lr~~l~~~~~~--s~l~d~~~~~~~le~a~~~~ 705 (723)
T 4gyw_A 666 GTDL-EYLKKVRGKVWKQRIS--SPLFNTKQYTMELERLYLQM 705 (723)
T ss_dssp HHCH-HHHHHHHHHHHHHHHH--SSTTCHHHHHHHHHHHHHHH
T ss_pred hcCH-HHHHHHHHHHHHHHHh--CcCcCHHHHHHHHHHHHHHH
Confidence 5565 333222 233333321 12233445555555555444
|
| >3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori} | Back alignment and structure |
|---|
Probab=97.54 E-value=0.00086 Score=56.25 Aligned_cols=128 Identities=13% Similarity=0.122 Sum_probs=75.8
Q ss_pred CcEEEEEeCCcccCCHHHHHHHHHHHHhCC--CcEEE-EEeCCCccCCcccCCCCchhhHHhhc--CCCeEeecCccHH-
Q 042753 273 ESVVYVCFGSRYVLTAKQIHELAAALEKTD--VDFVY-CVREPDERHASQDCGVLPDGFEDRVA--GRGYVIRGWSQQV- 346 (473)
Q Consensus 273 ~~~V~vs~Gs~~~~~~~~~~~~~~al~~~~--~~~i~-~~~~~~~~~~~~~~~~lp~~~~~~~~--~~nv~v~~~~pq~- 346 (473)
++++++..|+... ......++++++... ..+-+ .++... ..+.+.+... .-++.+ +|+|+.
T Consensus 1 ~~~~i~~~G~~~~--~Kg~~~li~a~~~l~~~~~~~l~i~G~g~----------~~~~~~~~~~~~~~~v~~-g~~~~~~ 67 (166)
T 3qhp_A 1 TPFKIAMVGRYSN--EKNQSVLIKAVALSKYKQDIVLLLKGKGP----------DEKKIKLLAQKLGVKAEF-GFVNSNE 67 (166)
T ss_dssp CCEEEEEESCCST--TTTHHHHHHHHHTCTTGGGEEEEEECCST----------THHHHHHHHHHHTCEEEC-CCCCHHH
T ss_pred CceEEEEEeccch--hcCHHHHHHHHHHhccCCCeEEEEEeCCc----------cHHHHHHHHHHcCCeEEE-eecCHHH
Confidence 3578888898853 233455667766542 23333 334321 1123332221 226777 999864
Q ss_pred --HhhhccCccceee----ccCchhHHHHHhhCC-eEecCcccccchhhHHHHHHHhcceEEeccCCCCCCCHHHHHHHH
Q 042753 347 --AILRHKAVGAFLT----HCGWNSVLEGVSAGV-VMLTWPMDADQYTNAQLLVDQLGVGIRVGEGTRNIPESDELARLL 419 (473)
Q Consensus 347 --~lL~~~~v~~~It----HgG~~s~~eal~~Gv-P~l~~P~~~DQ~~na~rv~~~~G~G~~l~~~~~~~~~~~~l~~~i 419 (473)
.++..+++ +|. -|...++.||+++|+ |+|+....+. ....+.+. +. .+. .-+.+++.++|
T Consensus 68 ~~~~~~~adv--~v~ps~~e~~~~~~~Eama~G~vPvi~~~~~~~---~~~~~~~~-~~--~~~-----~~~~~~l~~~i 134 (166)
T 3qhp_A 68 LLEILKTCTL--YVHAANVESEAIACLEAISVGIVPVIANSPLSA---TRQFALDE-RS--LFE-----PNNAKDLSAKI 134 (166)
T ss_dssp HHHHHTTCSE--EEECCCSCCCCHHHHHHHHTTCCEEEECCTTCG---GGGGCSSG-GG--EEC-----TTCHHHHHHHH
T ss_pred HHHHHHhCCE--EEECCcccCccHHHHHHHhcCCCcEEeeCCCCc---hhhhccCC-ce--EEc-----CCCHHHHHHHH
Confidence 46788887 554 344569999999996 9999432211 11112211 22 333 34799999999
Q ss_pred HHHhCCc
Q 042753 420 AQSVDGP 426 (473)
Q Consensus 420 ~~~l~~~ 426 (473)
.++++|+
T Consensus 135 ~~l~~~~ 141 (166)
T 3qhp_A 135 DWWLENK 141 (166)
T ss_dssp HHHHHCH
T ss_pred HHHHhCH
Confidence 9999987
|
| >2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8 | Back alignment and structure |
|---|
Probab=97.52 E-value=0.0023 Score=55.45 Aligned_cols=78 Identities=12% Similarity=0.129 Sum_probs=58.4
Q ss_pred CeEe-ecCccHH---HhhhccCccceeec----cCchhHHHHHhhCCeEecCcccccchhhHHHHHHHhcceEEeccCCC
Q 042753 336 GYVI-RGWSQQV---AILRHKAVGAFLTH----CGWNSVLEGVSAGVVMLTWPMDADQYTNAQLLVDQLGVGIRVGEGTR 407 (473)
Q Consensus 336 nv~v-~~~~pq~---~lL~~~~v~~~ItH----gG~~s~~eal~~GvP~l~~P~~~DQ~~na~rv~~~~G~G~~l~~~~~ 407 (473)
++.+ .+++++. .++..+++ +|.- |...++.||+++|+|+|+.... .....+ .. +.|..++
T Consensus 96 ~v~~~~g~~~~~~~~~~~~~ad~--~l~ps~~e~~~~~~~Ea~a~G~PvI~~~~~----~~~e~~-~~-~~g~~~~---- 163 (200)
T 2bfw_A 96 NVKVITEMLSREFVRELYGSVDF--VIIPSYFEPFGLVALEAMCLGAIPIASAVG----GLRDII-TN-ETGILVK---- 163 (200)
T ss_dssp TEEEECSCCCHHHHHHHHTTCSE--EEECCSCCSSCHHHHHHHHTTCEEEEESCH----HHHHHC-CT-TTCEEEC----
T ss_pred CEEEEeccCCHHHHHHHHHHCCE--EEECCCCCCccHHHHHHHHCCCCEEEeCCC----ChHHHc-CC-CceEEec----
Confidence 7888 8999853 57888887 5532 3356899999999999987543 344444 24 6787776
Q ss_pred CCCCHHHHHHHHHHHhC-Cc
Q 042753 408 NIPESDELARLLAQSVD-GP 426 (473)
Q Consensus 408 ~~~~~~~l~~~i~~~l~-~~ 426 (473)
.-+.+++.++|.++++ |+
T Consensus 164 -~~~~~~l~~~i~~l~~~~~ 182 (200)
T 2bfw_A 164 -AGDPGELANAILKALELSR 182 (200)
T ss_dssp -TTCHHHHHHHHHHHHHCCH
T ss_pred -CCCHHHHHHHHHHHHhcCH
Confidence 3478999999999999 87
|
| >3q3e_A HMW1C-like glycosyltransferase; N-glycosylation; 2.10A {Actinobacillus pleuropneumoniae serovaorganism_taxid} PDB: 3q3h_A* 3q3i_A | Back alignment and structure |
|---|
Probab=97.24 E-value=0.0033 Score=63.61 Aligned_cols=145 Identities=15% Similarity=0.140 Sum_probs=89.8
Q ss_pred CcEEEEEeCCcccCCHHHHHHHHHHHHhCCCcEEEEE--eCCCccCCcccCCCCchhhHHhhcCCCeEeecCccHHHhh-
Q 042753 273 ESVVYVCFGSRYVLTAKQIHELAAALEKTDVDFVYCV--REPDERHASQDCGVLPDGFEDRVAGRGYVIRGWSQQVAIL- 349 (473)
Q Consensus 273 ~~~V~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~--~~~~~~~~~~~~~~lp~~~~~~~~~~nv~v~~~~pq~~lL- 349 (473)
..++|.||++.....++.+....+.+++.+..++|.. +... +. ...+-..+.+.--.+.+++.+.+|..+.|
T Consensus 440 G~v~Fg~fn~~~Ki~p~~l~~WarIL~~vP~s~L~l~~~g~~~----g~-~~~~~~~~~~~GI~~Rv~F~g~~p~~e~la 514 (631)
T 3q3e_A 440 EVVNIGIASTTMKLNPYFLEALKAIRDRAKVKVHFHFALGQSN----GI-THPYVERFIKSYLGDSATAHPHSPYHQYLR 514 (631)
T ss_dssp SEEEEEEEECSTTCCHHHHHHHHHHHHHCSSEEEEEEEESSCC----GG-GHHHHHHHHHHHHGGGEEEECCCCHHHHHH
T ss_pred CeEEEEECCccccCCHHHHHHHHHHHHhCCCcEEEEEecCCCc----hh-hHHHHHHHHHcCCCccEEEcCCCCHHHHHH
Confidence 4689999999888889999888888888887777753 3221 00 00011111111112456777888876644
Q ss_pred --hccCccceee---ccCchhHHHHHhhCCeEecCcccccchhhH-HHHHHHhcceEE-eccCCCCCCCHHHHHHHHHHH
Q 042753 350 --RHKAVGAFLT---HCGWNSVLEGVSAGVVMLTWPMDADQYTNA-QLLVDQLGVGIR-VGEGTRNIPESDELARLLAQS 422 (473)
Q Consensus 350 --~~~~v~~~It---HgG~~s~~eal~~GvP~l~~P~~~DQ~~na-~rv~~~~G~G~~-l~~~~~~~~~~~~l~~~i~~~ 422 (473)
..+++ |+. .+|..|+.||++.|||+|+.+-..=.-..+ ..+. ..|+.-. +. -+.++..+..-++
T Consensus 515 ~y~~aDI--fLDpfpy~GgtTtlEALwmGVPVVTl~G~~~asRvgaSlL~-~~GLpE~LIA------~d~eeYv~~Av~L 585 (631)
T 3q3e_A 515 ILHNCDM--MVNPFPFGNTNGIIDMVTLGLVGVCKTGAEVHEHIDEGLFK-RLGLPEWLIA------NTVDEYVERAVRL 585 (631)
T ss_dssp HHHTCSE--EECCSSSCCSHHHHHHHHTTCCEEEECCSSHHHHHHHHHHH-HTTCCGGGEE------SSHHHHHHHHHHH
T ss_pred HHhcCcE--EEeCCcccCChHHHHHHHcCCCEEeccCCcHHHHhHHHHHH-hcCCCcceec------CCHHHHHHHHHHH
Confidence 67777 442 378899999999999999987431111111 1222 3355432 32 3577777777788
Q ss_pred hCCcHHHHHH
Q 042753 423 VDGPRRERLK 432 (473)
Q Consensus 423 l~~~~~~~~~ 432 (473)
.+|+ ..+++
T Consensus 586 a~D~-~~l~~ 594 (631)
T 3q3e_A 586 AENH-QERLE 594 (631)
T ss_dssp HHCH-HHHHH
T ss_pred hCCH-HHHHH
Confidence 8887 54433
|
| >3rhz_A GTF3, nucleotide sugar synthetase-like protein; glycosyltransferase, transferase; HET: UDP; 1.90A {Streptococcus parasanguinis} PDB: 3qkw_A* | Back alignment and structure |
|---|
Probab=97.12 E-value=0.0012 Score=62.58 Aligned_cols=107 Identities=13% Similarity=0.115 Sum_probs=75.6
Q ss_pred CeEeecCccHHHh---hhccCccceeeccCc---------hhHHHHHhhCCeEecCcccccchhhHHHHHHHhcceEEec
Q 042753 336 GYVIRGWSQQVAI---LRHKAVGAFLTHCGW---------NSVLEGVSAGVVMLTWPMDADQYTNAQLLVDQLGVGIRVG 403 (473)
Q Consensus 336 nv~v~~~~pq~~l---L~~~~v~~~ItHgG~---------~s~~eal~~GvP~l~~P~~~DQ~~na~rv~~~~G~G~~l~ 403 (473)
||...+|+|+.++ |+.++.+++..-+.+ +-+.|++++|+|+|+.+ ...++..+++. |+|+..+
T Consensus 215 nV~f~G~~~~~el~~~l~~~~~~lv~~~~~~~~y~~~~~P~Kl~eymA~G~PVI~~~----~~~~~~~v~~~-~~G~~~~ 289 (339)
T 3rhz_A 215 NVHKINYRPDEQLLMEMSQGGFGLVWMDDKDKEYQSLYCSYKLGSFLAAGIPVIVQE----GIANQELIENN-GLGWIVK 289 (339)
T ss_dssp TEEEEECCCHHHHHHHHHTEEEEECCCCGGGHHHHTTCCCHHHHHHHHHTCCEEEET----TCTTTHHHHHH-TCEEEES
T ss_pred CEEEeCCCCHHHHHHHHHhCCEEEEECCCchhHHHHhcChHHHHHHHHcCCCEEEcc----ChhHHHHHHhC-CeEEEeC
Confidence 8999999999775 445566433323322 34789999999999754 56778888866 9999887
Q ss_pred cCCCCCCCHHHHHHHHHHHhCCc-HHHHHHHHHHHHHHHHHHhcCCChHHHHHHHH
Q 042753 404 EGTRNIPESDELARLLAQSVDGP-RRERLKARELSGAALSAVVKGGSSDRDLNDFI 458 (473)
Q Consensus 404 ~~~~~~~~~~~l~~~i~~~l~~~-~~~~~~a~~~~~~~~~~~~~~gs~~~~~~~~~ 458 (473)
+.+++.++|..+..+. +.|++++++.++.++ .|.-..+++.+.+
T Consensus 290 -------~~~e~~~~i~~l~~~~~~~m~~na~~~a~~~~----~~~f~k~~l~~~~ 334 (339)
T 3rhz_A 290 -------DVEEAIMKVKNVNEDEYIELVKNVRSFNPILR----KGFFTRRLLTESV 334 (339)
T ss_dssp -------SHHHHHHHHHHCCHHHHHHHHHHHHHHTHHHH----TTHHHHHHHHHHH
T ss_pred -------CHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhh----ccHHHHHHHHHHH
Confidence 3688888998875443 688889999888884 4444444444433
|
| >2gt1_A Lipopolysaccharide heptosyltransferase-1; GT-B fold; 1.90A {Escherichia coli UTI89} PDB: 2h1f_A* 2h1h_A* | Back alignment and structure |
|---|
Probab=95.97 E-value=0.23 Score=46.47 Aligned_cols=136 Identities=7% Similarity=0.004 Sum_probs=77.7
Q ss_pred CCcEEEEEeCCcc---cCCHHHHHHHHHHHHhCCCcEEEEEeCCCccCCcccCCCCchhhHHhhcCCCeEeecC--c-cH
Q 042753 272 DESVVYVCFGSRY---VLTAKQIHELAAALEKTDVDFVYCVREPDERHASQDCGVLPDGFEDRVAGRGYVIRGW--S-QQ 345 (473)
Q Consensus 272 ~~~~V~vs~Gs~~---~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~v~~~--~-pq 345 (473)
+++.|.+.-|+.. .++.+.+.++++.|.+.+.++++..+.+. + ..+-+.+.+. .+++.+..- + .-
T Consensus 177 ~~~~i~l~pga~~~~k~wp~~~~~~l~~~L~~~~~~vvl~~g~~~----e---~~~~~~i~~~--~~~~~l~g~~sl~el 247 (326)
T 2gt1_A 177 AGEYAVFLHATTRDDKHWPEEHWRELIGLLADSGIRIKLPWGAPH----E---EERAKRLAEG--FAYVEVLPKMSLEGV 247 (326)
T ss_dssp TTSEEEEECCCSSGGGSCCHHHHHHHHHHTTTTCCEEEECCSSHH----H---HHHHHHHHTT--CTTEEECCCCCHHHH
T ss_pred CCCEEEEEeCCCCccccCCHHHHHHHHHHHHHCCCcEEEecCCHH----H---HHHHHHHHhh--CCcccccCCCCHHHH
Confidence 5678888888763 37788888899988777777766544321 0 0001111111 123322222 2 23
Q ss_pred HHhhhccCccceeeccCchhHHHHHhhCCeEecC--cccccchhhHHHHHHHhcce-EEec--cCCCCCCCHHHHHHHHH
Q 042753 346 VAILRHKAVGAFLTHCGWNSVLEGVSAGVVMLTW--PMDADQYTNAQLLVDQLGVG-IRVG--EGTRNIPESDELARLLA 420 (473)
Q Consensus 346 ~~lL~~~~v~~~ItHgG~~s~~eal~~GvP~l~~--P~~~DQ~~na~rv~~~~G~G-~~l~--~~~~~~~~~~~l~~~i~ 420 (473)
.++++++++ +|+.-.. .++=|.+.|+|+|++ |.... +-. -+|-. ..+. ..-.+.++.+++.++++
T Consensus 248 ~ali~~a~l--~I~~DSG-~~HlAaa~g~P~v~lfg~t~p~------~~~-P~~~~~~~~~~~~~cm~~I~~~~V~~~i~ 317 (326)
T 2gt1_A 248 ARVLAGAKF--VVSVDTG-LSHLTAALDRPNITVYGPTDPG------LIG-GYGKNQMVCRAPGNELSQLTANAVKQFIE 317 (326)
T ss_dssp HHHHHTCSE--EEEESSH-HHHHHHHTTCCEEEEESSSCHH------HHC-CCSSSEEEEECGGGCGGGCCHHHHHHHHH
T ss_pred HHHHHhCCE--EEecCCc-HHHHHHHcCCCEEEEECCCChh------hcC-CCCCCceEecCCcccccCCCHHHHHHHHH
Confidence 568899997 9998432 233366699999987 32111 100 01211 1111 01135789999999999
Q ss_pred HHhCCc
Q 042753 421 QSVDGP 426 (473)
Q Consensus 421 ~~l~~~ 426 (473)
++|++.
T Consensus 318 ~~l~~~ 323 (326)
T 2gt1_A 318 ENAEKA 323 (326)
T ss_dssp HTTTTC
T ss_pred HHHHHh
Confidence 999874
|
| >2wqk_A 5'-nucleotidase SURE; SURE protein, putative acid phosphatase, structural genomics, 3-D structure, mixed alpha/beta protein, NPPSFA; 1.50A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=94.89 E-value=0.13 Score=45.96 Aligned_cols=112 Identities=17% Similarity=0.095 Sum_probs=63.3
Q ss_pred ccEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCCCChhhhhhhccCCCCCCeeEEEcCCCC---CCCCCChhhHHH
Q 042753 5 GAHILVYPFPTSGHIIPLLDLTNRLLTLGLNVTVLITQNNLPLLDSLNANHPSTSLQSLVLPQPK---WPAGSPATRLLK 81 (473)
Q Consensus 5 ~~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~i~~~~~~~~~~~~~f~~l~~~~---~~~~~~~~~~~~ 81 (473)
|+|||+.-==|. +--=+..|+++|.+.| +|+++.+...+.-....+. ....+++....... .++-|.+
T Consensus 1 Mp~ILlTNDDGi-~apGi~~L~~~l~~~g-~V~VvAP~~~~Sg~g~siT--~~~pl~~~~~~~~~~~~v~GTPaD----- 71 (251)
T 2wqk_A 1 MPTFLLVNDDGY-FSPGINALREALKSLG-RVVVVAPDRNLSGVGHSLT--FTEPLKMRKIDTDFYTVIDGTPAD----- 71 (251)
T ss_dssp -CEEEEECSSCT-TCHHHHHHHHHHTTTS-EEEEEEESSCCTTSCCSCC--CSSCEEEEEEETTEEEETTCCHHH-----
T ss_pred CCEEEEEcCCCC-CcHHHHHHHHHHHhCC-CEEEEeeCCCCcccccCcC--CCCCceeEEeeccceeecCCChHH-----
Confidence 788888763332 2233778899999888 5888888766443322211 11234444433210 1222211
Q ss_pred HHHHHHHHhhHHHHHHHhcCCCCCcEEEe----------CCCcc---hHHHHHHHhCCCcEEEecc
Q 042753 82 FMRVLRELHYPALLDWFKSHPSPPVAILS----------DFFLG---WTQGLAAELGLPRVVFSPS 134 (473)
Q Consensus 82 ~~~~~~~~~~~~l~~~l~~~~~~pD~VV~----------D~~~~---~~~~~A~~~giP~v~~~~~ 134 (473)
-..-.+..++.+. +||+||+ |.+.+ .++.-|..+|||.|.++..
T Consensus 72 -------CV~lal~~~l~~~--~PDLVvSGIN~G~N~g~dv~ySGTVgAA~Ea~~~GipaIA~S~~ 128 (251)
T 2wqk_A 72 -------CVHLGYRVILEEK--KPDLVLSGINEGPNLGEDITYSGTVSGAMEGRILGIPSIAFSAF 128 (251)
T ss_dssp -------HHHHHHHTTTTTC--CCSEEEEEEESSCCCGGGGGGCHHHHHHHHHHHTTCCEEEEEEE
T ss_pred -------HHhhhhhhhcCCC--CCCEEEeCccCCCccccceecchHHHHHHHHHhcCCCeEEEEcc
Confidence 1122345566666 8999997 44444 3445567789999998743
|
| >2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A* | Back alignment and structure |
|---|
Probab=93.66 E-value=0.2 Score=48.68 Aligned_cols=84 Identities=13% Similarity=0.002 Sum_probs=56.2
Q ss_pred CCeEeecCccHHH---hhhccCccceeecc---C-chhHHHHHhhCCeEecCcccccchhhHHHHHHHhcceEEeccCCC
Q 042753 335 RGYVIRGWSQQVA---ILRHKAVGAFLTHC---G-WNSVLEGVSAGVVMLTWPMDADQYTNAQLLVDQLGVGIRVGEGTR 407 (473)
Q Consensus 335 ~nv~v~~~~pq~~---lL~~~~v~~~ItHg---G-~~s~~eal~~GvP~l~~P~~~DQ~~na~rv~~~~G~G~~l~~~~~ 407 (473)
.++...+++|+.+ ++..+++ ||.-+ | ..+++||+++|+|+|+ -..+ ....+. .-..|+.++
T Consensus 295 ~~v~f~G~~~~~~l~~~~~~adv--~v~pS~~E~~g~~~lEAmA~G~PVV~-~~~g----~~e~v~-~~~~G~lv~---- 362 (413)
T 2x0d_A 295 IHLNSLGKLTLEDYADLLKRSSI--GISLMISPHPSYPPLEMAHFGLRVIT-NKYE----NKDLSN-WHSNIVSLE---- 362 (413)
T ss_dssp EEEEEEESCCHHHHHHHHHHCCE--EECCCSSSSCCSHHHHHHHTTCEEEE-ECBT----TBCGGG-TBTTEEEES----
T ss_pred CcEEEcCCCCHHHHHHHHHhCCE--EEEecCCCCCCcHHHHHHhCCCcEEE-eCCC----cchhhh-cCCCEEEeC----
Confidence 4788889998754 6788887 66422 3 3468999999999998 2222 122333 313687776
Q ss_pred CCCCHHHHHHHHHHHhCCcHHHHHH
Q 042753 408 NIPESDELARLLAQSVDGPRRERLK 432 (473)
Q Consensus 408 ~~~~~~~l~~~i~~~l~~~~~~~~~ 432 (473)
.-+.++|.++|.++++|+ ..+++
T Consensus 363 -~~d~~~la~ai~~ll~~~-~~~~~ 385 (413)
T 2x0d_A 363 -QLNPENIAETLVELCMSF-NNRDV 385 (413)
T ss_dssp -SCSHHHHHHHHHHHHHHT-C----
T ss_pred -CCCHHHHHHHHHHHHcCH-HHHHH
Confidence 357899999999999886 55544
|
| >3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A* | Back alignment and structure |
|---|
Probab=92.80 E-value=1.9 Score=43.30 Aligned_cols=169 Identities=10% Similarity=0.006 Sum_probs=91.1
Q ss_pred CcEEEEEeCCccc-CCHHHHHHHHHHHHhCCCcEEEEEeCCCccCCcccCCCCchhhHH--hhcCCCeEeecCccHH---
Q 042753 273 ESVVYVCFGSRYV-LTAKQIHELAAALEKTDVDFVYCVREPDERHASQDCGVLPDGFED--RVAGRGYVIRGWSQQV--- 346 (473)
Q Consensus 273 ~~~V~vs~Gs~~~-~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~lp~~~~~--~~~~~nv~v~~~~pq~--- 346 (473)
+..+++..|.... ...+.+.+.+..+.+.+.++++.-.++. .....+.. .....++.+..+.+..
T Consensus 326 ~~p~i~~vgRl~~~Kg~~~li~a~~~l~~~~~~l~l~G~G~~---------~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 396 (536)
T 3vue_A 326 KIPLIAFIGRLEEQKGPDVMAAAIPELMQEDVQIVLLGTGKK---------KFEKLLKSMEEKYPGKVRAVVKFNAPLAH 396 (536)
T ss_dssp TSCEEEEECCBSGGGCHHHHHHHHHHHTTSSCEEEEECCBCH---------HHHHHHHHHHHHSTTTEEEECSCCHHHHH
T ss_pred CCcEEEEEeeccccCChHHHHHHHHHhHhhCCeEEEEeccCc---------hHHHHHHHHHhhcCCceEEEEeccHHHHH
Confidence 4456677788753 2344444444444455666665544321 11111111 1123566666666653
Q ss_pred HhhhccCccceeec----cCchhHHHHHhhCCeEecCcccccchhhHHHHHHHhcceEEeccCC-----CCCCCHHHHHH
Q 042753 347 AILRHKAVGAFLTH----CGWNSVLEGVSAGVVMLTWPMDADQYTNAQLLVDQLGVGIRVGEGT-----RNIPESDELAR 417 (473)
Q Consensus 347 ~lL~~~~v~~~ItH----gG~~s~~eal~~GvP~l~~P~~~DQ~~na~rv~~~~G~G~~l~~~~-----~~~~~~~~l~~ 417 (473)
.+++.+++ ||.- |=..+++||+++|+|+|+... ......|.+. .-|....... ....+.+.|.+
T Consensus 397 ~~~~~aD~--~v~PS~~E~fgl~~lEAma~G~PvI~s~~----gG~~e~V~dg-~~G~~~~~~~~~g~l~~~~d~~~la~ 469 (536)
T 3vue_A 397 LIMAGADV--LAVPSRFEPCGLIQLQGMRYGTPCACAST----GGLVDTVIEG-KTGFHMGRLSVDCKVVEPSDVKKVAA 469 (536)
T ss_dssp HHHHHCSE--EEECCSCCSSCSHHHHHHHTTCCEEECSC----THHHHHCCBT-TTEEECCCCCSCTTCCCHHHHHHHHH
T ss_pred HHHHhhhe--eecccccCCCCHHHHHHHHcCCCEEEcCC----CCchheeeCC-CCccccccCCCceeEECCCCHHHHHH
Confidence 36788887 6643 223589999999999998654 3344444422 2454433100 11235678999
Q ss_pred HHHHHhC--CcHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHhh
Q 042753 418 LLAQSVD--GPRRERLKARELSGAALSAVVKGGSSDRDLNDFIKRINEL 464 (473)
Q Consensus 418 ~i~~~l~--~~~~~~~~a~~~~~~~~~~~~~~gs~~~~~~~~~~~~~~~ 464 (473)
+|++++. +.+.+++. .+.+++.--|=++.+++.++...++
T Consensus 470 ai~ral~~~~~~~~~~~-------~~~am~~~fSW~~~A~~y~~ly~~L 511 (536)
T 3vue_A 470 TLKRAIKVVGTPAYEEM-------VRNCMNQDLSWKGPAKNWENVLLGL 511 (536)
T ss_dssp HHHHHHHHTTSHHHHHH-------HHHHHHSCCSSHHHHHHHHHHHHTT
T ss_pred HHHHHHHhcCcHHHHHH-------HHHHHHhcCCHHHHHHHHHHHHHHh
Confidence 9988774 22233322 2222233455667777777777665
|
| >2ywr_A Phosphoribosylglycinamide formyltransferase; rossmann fold, structural genomics, NPPSFA; 1.77A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=89.61 E-value=3.2 Score=36.02 Aligned_cols=104 Identities=10% Similarity=0.036 Sum_probs=62.7
Q ss_pred ccEEEEEcCCCCCChHHHHHHHHHHHhCCC--eEEEEeCCCCh----hhhhhhccCCCCCCeeEEEcCCCCCCCCCChhh
Q 042753 5 GAHILVYPFPTSGHIIPLLDLTNRLLTLGL--NVTVLITQNNL----PLLDSLNANHPSTSLQSLVLPQPKWPAGSPATR 78 (473)
Q Consensus 5 ~~~Il~~~~~~~GH~~p~l~La~~L~~rGh--~Vt~~~~~~~~----~~i~~~~~~~~~~~~~f~~l~~~~~~~~~~~~~ 78 (473)
|+||+|+..+.. .-+.++.++|.+.+| +|..+.+.... ++.++. ++.+..++.. .+..
T Consensus 1 m~rI~vl~SG~g---~~~~~~l~~l~~~~~~~~i~~Vvs~~~~~~~~~~A~~~-------gIp~~~~~~~---~~~~--- 64 (216)
T 2ywr_A 1 MLKIGVLVSGRG---SNLQAIIDAIESGKVNASIELVISDNPKAYAIERCKKH-------NVECKVIQRK---EFPS--- 64 (216)
T ss_dssp CEEEEEEECSCC---HHHHHHHHHHHTTSSCEEEEEEEESCTTCHHHHHHHHH-------TCCEEECCGG---GSSS---
T ss_pred CCEEEEEEeCCc---HHHHHHHHHHHhCCCCCeEEEEEeCCCChHHHHHHHHc-------CCCEEEeCcc---cccc---
Confidence 679988766443 347788888988888 77666554322 223333 5666544321 1110
Q ss_pred HHHHHHHHHHHhhHHHHHHHhcCCCCCcEEEeCCCcc-hHHHHHHHhCCCcEEEecc
Q 042753 79 LLKFMRVLRELHYPALLDWFKSHPSPPVAILSDFFLG-WTQGLAAELGLPRVVFSPS 134 (473)
Q Consensus 79 ~~~~~~~~~~~~~~~l~~~l~~~~~~pD~VV~D~~~~-~~~~~A~~~giP~v~~~~~ 134 (473)
++...+.+.+.|++. +||++|+-.+.. ....+-....-.++-++++
T Consensus 65 --------r~~~~~~~~~~l~~~--~~Dliv~a~y~~il~~~~l~~~~~~~iNiHpS 111 (216)
T 2ywr_A 65 --------KKEFEERMALELKKK--GVELVVLAGFMRILSHNFLKYFPNKVINIHPS 111 (216)
T ss_dssp --------HHHHHHHHHHHHHHT--TCCEEEESSCCSCCCHHHHTTSTTCEEEEESS
T ss_pred --------hhhhhHHHHHHHHhc--CCCEEEEeCchhhCCHHHHhhccCCeEEEcCC
Confidence 113446677888889 999999876633 4445555555566776655
|
| >1g5t_A COB(I)alamin adenosyltransferase; P-loop protein, cobalamin biosynthesis, RECA fold; HET: ATP; 1.80A {Salmonella typhimurium} SCOP: c.37.1.11 PDB: 1g5r_A* 1g64_A* | Back alignment and structure |
|---|
Probab=89.59 E-value=4.1 Score=34.62 Aligned_cols=97 Identities=12% Similarity=0.021 Sum_probs=61.7
Q ss_pred ccEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCCCC------hhhhhhhccCCCCCCeeEEEcCCCCCCCCC-Chh
Q 042753 5 GAHILVYPFPTSGHIIPLLDLTNRLLTLGLNVTVLITQNN------LPLLDSLNANHPSTSLQSLVLPQPKWPAGS-PAT 77 (473)
Q Consensus 5 ~~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~------~~~i~~~~~~~~~~~~~f~~l~~~~~~~~~-~~~ 77 (473)
...|++++..+.|-..-.+.+|-+.+.+|++|.|+..-.. ...++.. ++++..... ++. ...
T Consensus 28 ~g~i~v~tG~GkGKTTaA~GlalRA~g~G~rV~~vQF~Kg~~~~gE~~~l~~L-------~v~~~~~g~----gf~~~~~ 96 (196)
T 1g5t_A 28 RGIIIVFTGNGKGKTTAAFGTAARAVGHGKNVGVVQFIKGTWPNGERNLLEPH-------GVEFQVMAT----GFTWETQ 96 (196)
T ss_dssp CCCEEEEESSSSCHHHHHHHHHHHHHHTTCCEEEEESSCCSSCCHHHHHHGGG-------TCEEEECCT----TCCCCGG
T ss_pred CceEEEECCCCCCHHHHHHHHHHHHHHCCCeEEEEEeeCCCCCccHHHHHHhC-------CcEEEEccc----ccccCCC
Confidence 3578999999999999999999999999999999976542 1223332 366665553 111 111
Q ss_pred hHHHHHHHHHHHhhHHHHHHHhcCCCCCcEEEeCCCcc
Q 042753 78 RLLKFMRVLRELHYPALLDWFKSHPSPPVAILSDFFLG 115 (473)
Q Consensus 78 ~~~~~~~~~~~~~~~~l~~~l~~~~~~pD~VV~D~~~~ 115 (473)
....-..... ..-....+.+.+. ++|+||.|.+.+
T Consensus 97 ~~~~~~~~a~-~~l~~a~~~l~~~--~yDlvILDEi~~ 131 (196)
T 1g5t_A 97 NREADTAACM-AVWQHGKRMLADP--LLDMVVLDELTY 131 (196)
T ss_dssp GHHHHHHHHH-HHHHHHHHHTTCT--TCSEEEEETHHH
T ss_pred CcHHHHHHHH-HHHHHHHHHHhcC--CCCEEEEeCCCc
Confidence 1111111122 3334455666666 999999998743
|
| >3av3_A Phosphoribosylglycinamide formyltransferase; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; HET: MSE; 1.70A {Geobacillus kaustophilus} | Back alignment and structure |
|---|
Probab=87.13 E-value=5.7 Score=34.28 Aligned_cols=105 Identities=11% Similarity=0.052 Sum_probs=64.4
Q ss_pred CccEEEEEcCCCCCChHHHHHHHHHHHhC--CCeEEEEeCCCChhh----hhhhccCCCCCCeeEEEcCCCCCCCCCChh
Q 042753 4 AGAHILVYPFPTSGHIIPLLDLTNRLLTL--GLNVTVLITQNNLPL----LDSLNANHPSTSLQSLVLPQPKWPAGSPAT 77 (473)
Q Consensus 4 ~~~~Il~~~~~~~GH~~p~l~La~~L~~r--Gh~Vt~~~~~~~~~~----i~~~~~~~~~~~~~f~~l~~~~~~~~~~~~ 77 (473)
+|+||.++.++. |+ -+.++.++|.+. +|+|..+.+...... .++. ++.+..++.. .+..
T Consensus 2 ~m~ki~vl~sG~-g~--~~~~~l~~l~~~~l~~~I~~Vit~~~~~~v~~~A~~~-------gIp~~~~~~~---~~~~-- 66 (212)
T 3av3_A 2 HMKRLAVFASGS-GT--NFQAIVDAAKRGDLPARVALLVCDRPGAKVIERAARE-------NVPAFVFSPK---DYPS-- 66 (212)
T ss_dssp CCEEEEEECCSS-CH--HHHHHHHHHHTTCCCEEEEEEEESSTTCHHHHHHHHT-------TCCEEECCGG---GSSS--
T ss_pred CCcEEEEEEECC-cH--HHHHHHHHHHhCCCCCeEEEEEeCCCCcHHHHHHHHc-------CCCEEEeCcc---cccc--
Confidence 478998777654 43 367778888886 799987776532222 2222 5666544321 1110
Q ss_pred hHHHHHHHHHHHhhHHHHHHHhcCCCCCcEEEeCCCcc-hHHHHHHHhCCCcEEEecc
Q 042753 78 RLLKFMRVLRELHYPALLDWFKSHPSPPVAILSDFFLG-WTQGLAAELGLPRVVFSPS 134 (473)
Q Consensus 78 ~~~~~~~~~~~~~~~~l~~~l~~~~~~pD~VV~D~~~~-~~~~~A~~~giP~v~~~~~ 134 (473)
.+...+.+.+.+++. +||++|+-.+.. ....+-..+.-.++-++++
T Consensus 67 ---------~~~~~~~~~~~l~~~--~~Dliv~a~y~~il~~~~l~~~~~~~iNiHpS 113 (212)
T 3av3_A 67 ---------KAAFESEILRELKGR--QIDWIALAGYMRLIGPTLLSAYEGKIVNIHPS 113 (212)
T ss_dssp ---------HHHHHHHHHHHHHHT--TCCEEEESSCCSCCCHHHHHHTTTCEEEEESS
T ss_pred ---------hhhhHHHHHHHHHhc--CCCEEEEchhhhhCCHHHHhhhcCCEEEEecC
Confidence 113445677888889 999999876643 4445556666667777665
|
| >3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum} | Back alignment and structure |
|---|
Probab=84.88 E-value=3.8 Score=35.91 Aligned_cols=95 Identities=13% Similarity=0.003 Sum_probs=58.6
Q ss_pred CCCCccEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCCCChhhhhhhccCCCCCCeeEEEcCCCCCCCCCChhhHH
Q 042753 1 MLPAGAHILVYPFPTSGHIIPLLDLTNRLLTLGLNVTVLITQNNLPLLDSLNANHPSTSLQSLVLPQPKWPAGSPATRLL 80 (473)
Q Consensus 1 ~~~~~~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~i~~~~~~~~~~~~~f~~l~~~~~~~~~~~~~~~ 80 (473)
|.|..+||.|+-.+..|- +||+.|.++||+|+.+..+ +.+... . +..+|..
T Consensus 2 ~~~~~mkI~IIG~G~~G~-----sLA~~L~~~G~~V~~~~~~---~~~~~a-------D--ilavP~~------------ 52 (232)
T 3dfu_A 2 MQAPRLRVGIFDDGSSTV-----NMAEKLDSVGHYVTVLHAP---EDIRDF-------E--LVVIDAH------------ 52 (232)
T ss_dssp -CCCCCEEEEECCSCCCS-----CHHHHHHHTTCEEEECSSG---GGGGGC-------S--EEEECSS------------
T ss_pred CCCCCcEEEEEeeCHHHH-----HHHHHHHHCCCEEEEecCH---HHhccC-------C--EEEEcHH------------
Confidence 556778999999888874 5899999999999987764 122222 2 6666631
Q ss_pred HHHHHHHHHhhHHHHHHHhcCCCCCcEEEeCCCcc---hHHHHHHHhCCCcEEEecc
Q 042753 81 KFMRVLRELHYPALLDWFKSHPSPPVAILSDFFLG---WTQGLAAELGLPRVVFSPS 134 (473)
Q Consensus 81 ~~~~~~~~~~~~~l~~~l~~~~~~pD~VV~D~~~~---~~~~~A~~~giP~v~~~~~ 134 (473)
.+.+-+.++.... +++.+|+|.... ....-+...|+.++..+|.
T Consensus 53 --------ai~~vl~~l~~~l--~~g~ivvd~sgs~~~~vl~~~~~~g~~fvg~HPm 99 (232)
T 3dfu_A 53 --------GVEGYVEKLSAFA--RRGQMFLHTSLTHGITVMDPLETSGGIVMSAHPI 99 (232)
T ss_dssp --------CHHHHHHHHHTTC--CTTCEEEECCSSCCGGGGHHHHHTTCEEEEEEEE
T ss_pred --------HHHHHHHHHHHhc--CCCCEEEEECCcCHHHHHHHHHhCCCcEEEeeeC
Confidence 1112223333445 788888885422 2334445668777776655
|
| >3ih5_A Electron transfer flavoprotein alpha-subunit; alpha-beta-alpha sandwich, structural genomics, PSI-2, protein structure initiative; 2.60A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=84.07 E-value=1.5 Score=38.20 Aligned_cols=113 Identities=13% Similarity=0.085 Sum_probs=67.0
Q ss_pred CccEEEEEcCCCCCChHH----HHHHHHHHHhC-CCeEEEEeCCC-ChhhhhhhccCCCCCCe-eEEEcCCCCCCCCCCh
Q 042753 4 AGAHILVYPFPTSGHIIP----LLDLTNRLLTL-GLNVTVLITQN-NLPLLDSLNANHPSTSL-QSLVLPQPKWPAGSPA 76 (473)
Q Consensus 4 ~~~~Il~~~~~~~GH~~p----~l~La~~L~~r-Gh~Vt~~~~~~-~~~~i~~~~~~~~~~~~-~f~~l~~~~~~~~~~~ 76 (473)
+|++|+++.-...|.++| ++.-|++|++. |-+|+.++... ..+.++.... -|. +.+.+..+......+
T Consensus 2 ~m~~ilV~~E~~~g~l~~~s~ell~~A~~La~~~g~~v~av~~G~~~~~~~~~~~~----~Gad~v~~v~~~~~~~~~~- 76 (217)
T 3ih5_A 2 NANNLFVYCEIEEGIVADVSLELLTKGRSLANELNCQLEAVVAGTGLKEIEKQILP----YGVDKLHVFDAEGLYPYTS- 76 (217)
T ss_dssp -CCCEEEECCEETTEECHHHHHHHHHHHHHHHHHTCCEEEEEEESCCTTTHHHHGG----GTCSEEEEEECGGGSSCCH-
T ss_pred CcccEEEEEECcCCEECHHHHHHHHHHHHHHHhcCCeEEEEEECCCHHHHHHHHHh----cCCCEEEEecCcccccCCH-
Confidence 588899988766677766 57778888874 77777665432 2222332211 022 222233211111110
Q ss_pred hhHHHHHHHHHHHhhHHHHHHHhcCCCCCcEEEeCCCcc---hHHHHHHHhCCCcEEEecc
Q 042753 77 TRLLKFMRVLRELHYPALLDWFKSHPSPPVAILSDFFLG---WTQGLAAELGLPRVVFSPS 134 (473)
Q Consensus 77 ~~~~~~~~~~~~~~~~~l~~~l~~~~~~pD~VV~D~~~~---~~~~~A~~~giP~v~~~~~ 134 (473)
......+.+++++. +||+|++..... .+..+|.++++|.+.-++.
T Consensus 77 -----------~~~a~~l~~~i~~~--~p~~Vl~g~t~~G~~laprlAa~L~~~~~sdv~~ 124 (217)
T 3ih5_A 77 -----------LPHTSILVNLFKEE--QPQICLMGATVIGRDLGPRVSSALTSGLTADCTS 124 (217)
T ss_dssp -----------HHHHHHHHHHHHHH--CCSEEEEECSHHHHHHHHHHHHHTTCCCBCSCSE
T ss_pred -----------HHHHHHHHHHHHhc--CCCEEEEeCCcchhhHHHHHHHHhCCCccceEEE
Confidence 13345666677777 899999987655 3568899999998875443
|
| >3ty2_A 5'-nucleotidase SURE; surviVal protein, phosphatase, hydrolase; HET: MSE; 1.89A {Coxiella burnetii} SCOP: c.106.1.0 | Back alignment and structure |
|---|
Probab=83.88 E-value=2.2 Score=38.04 Aligned_cols=43 Identities=16% Similarity=-0.036 Sum_probs=30.4
Q ss_pred CccEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCCCChhhh
Q 042753 4 AGAHILVYPFPTSGHIIPLLDLTNRLLTLGLNVTVLITQNNLPLL 48 (473)
Q Consensus 4 ~~~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~i 48 (473)
.++|||+.-==+. |---+.+|+++|.+ +|+|+++.+...+.-.
T Consensus 10 ~~m~ILlTNDDGi-~apGi~aL~~~l~~-~~~V~VVAP~~~~Sg~ 52 (261)
T 3ty2_A 10 PKLRLLLSNDDGV-YAKGLAILAKTLAD-LGEVDVVAPDRNRSGA 52 (261)
T ss_dssp -CCEEEEECSSCT-TCHHHHHHHHHHTT-TSEEEEEEESSCCTTC
T ss_pred CCCeEEEEcCCCC-CCHHHHHHHHHHHh-cCCEEEEecCCCCcCc
Confidence 3678888874333 33447788888877 8999999998765433
|
| >1uqt_A Alpha, alpha-trehalose-phosphate synthase; glycosyltransferase, transferase; HET: U2F; 2.0A {Escherichia coli} SCOP: c.87.1.6 PDB: 1uqu_A* 2wtx_A* 1gz5_A* | Back alignment and structure |
|---|
Probab=83.82 E-value=13 Score=36.53 Aligned_cols=106 Identities=19% Similarity=0.173 Sum_probs=68.7
Q ss_pred eecCccHHH---hhhccCccceee---ccCch-hHHHHHhhCC-----eEecCcccccchhhHHHHHHHhcceEEeccCC
Q 042753 339 IRGWSQQVA---ILRHKAVGAFLT---HCGWN-SVLEGVSAGV-----VMLTWPMDADQYTNAQLLVDQLGVGIRVGEGT 406 (473)
Q Consensus 339 v~~~~pq~~---lL~~~~v~~~It---HgG~~-s~~eal~~Gv-----P~l~~P~~~DQ~~na~rv~~~~G~G~~l~~~~ 406 (473)
+.+++++.+ ++..+++ ||. .=|+| +.+||+++|+ |+|+--..+--.. + .-|+.++
T Consensus 336 ~~g~v~~~el~~ly~~ADv--~v~pS~~EGfgLv~lEAmA~g~~~~~gpvV~S~~~G~~~~----l----~~g~lv~--- 402 (482)
T 1uqt_A 336 LNQHFDRKLLMKIFRYSDV--GLVTPLRDGMNLVAKEYVAAQDPANPGVLVLSQFAGAANE----L----TSALIVN--- 402 (482)
T ss_dssp ECSCCCHHHHHHHHHHCSE--EEECCSSBSCCHHHHHHHHHSCTTSCCEEEEETTBGGGGT----C----TTSEEEC---
T ss_pred eCCCCCHHHHHHHHHHccE--EEECCCcccCCchHHHHHHhCCCCCCCCEEEECCCCCHHH----h----CCeEEEC---
Confidence 457788765 5677887 553 33554 8999999998 6766443221111 1 1366666
Q ss_pred CCCCCHHHHHHHHHHHhCCc-HHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHhh
Q 042753 407 RNIPESDELARLLAQSVDGP-RRERLKARELSGAALSAVVKGGSSDRDLNDFIKRINEL 464 (473)
Q Consensus 407 ~~~~~~~~l~~~i~~~l~~~-~~~~~~a~~~~~~~~~~~~~~gs~~~~~~~~~~~~~~~ 464 (473)
.-+.+++.++|.++|+++ +.-++..++..+.++ . -+.+..++.+++.+.+.
T Consensus 403 --p~d~~~lA~ai~~lL~~~~~~r~~~~~~~~~~v~----~-~s~~~~a~~~l~~l~~~ 454 (482)
T 1uqt_A 403 --PYDRDEVAAALDRALTMSLAERISRHAEMLDVIV----K-NDINHWQECFISDLKQI 454 (482)
T ss_dssp --TTCHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHH----H-TCHHHHHHHHHHHHHHS
T ss_pred --CCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH----h-CCHHHHHHHHHHHHHhc
Confidence 357899999999999864 223344444444443 2 46888888999888776
|
| >4dim_A Phosphoribosylglycinamide synthetase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, ligase; 2.61A {Anaerococcus prevotii} | Back alignment and structure |
|---|
Probab=83.81 E-value=4.4 Score=38.81 Aligned_cols=87 Identities=11% Similarity=-0.010 Sum_probs=54.2
Q ss_pred ccEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCCC-ChhhhhhhccCCCCCCeeEEEcCCCCCCCCCChhhHHHHH
Q 042753 5 GAHILVYPFPTSGHIIPLLDLTNRLLTLGLNVTVLITQN-NLPLLDSLNANHPSTSLQSLVLPQPKWPAGSPATRLLKFM 83 (473)
Q Consensus 5 ~~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~-~~~~i~~~~~~~~~~~~~f~~l~~~~~~~~~~~~~~~~~~ 83 (473)
++||+++-.+.. .+.+++++.+.|++|+++..+. +....... -.+..++..
T Consensus 7 ~~~ilI~g~g~~-----~~~~~~a~~~~G~~~v~v~~~~~~~~~~~~a--------d~~~~~~~~--------------- 58 (403)
T 4dim_A 7 NKRLLILGAGRG-----QLGLYKAAKELGIHTIAGTMPNAHKPCLNLA--------DEISYMDIS--------------- 58 (403)
T ss_dssp CCEEEEECCCGG-----GHHHHHHHHHHTCEEEEEECSSCCHHHHHHC--------SEEEECCTT---------------
T ss_pred CCEEEEECCcHh-----HHHHHHHHHHCCCEEEEEcCCCCCCcchhhC--------CeEEEecCC---------------
Confidence 578988876643 3668999999999999997653 32222211 123333310
Q ss_pred HHHHHHhhHHHHHHHhcCCCCCcEEEeC---CCcchHHHHHHHhCCC
Q 042753 84 RVLRELHYPALLDWFKSHPSPPVAILSD---FFLGWTQGLAAELGLP 127 (473)
Q Consensus 84 ~~~~~~~~~~l~~~l~~~~~~pD~VV~D---~~~~~~~~~A~~~giP 127 (473)
-.+.+.+++++. ++|+|+.. ........+++++|+|
T Consensus 59 ------d~~~l~~~~~~~--~~d~v~~~~~~~~~~~~a~~~~~~gl~ 97 (403)
T 4dim_A 59 ------NPDEVEQKVKDL--NLDGAATCCLDTGIVSLARICDKENLV 97 (403)
T ss_dssp ------CHHHHHHHTTTS--CCSEEECCSCSTTHHHHHHHHHHHTCS
T ss_pred ------CHHHHHHHHHHc--CCCEEEeCCcchhHHHHHHHHHHcCcC
Confidence 014556667777 89999963 2222345677889986
|
| >3auf_A Glycinamide ribonucleotide transformylase 1; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; 2.07A {Symbiobacterium toebii} | Back alignment and structure |
|---|
Probab=83.54 E-value=14 Score=32.14 Aligned_cols=105 Identities=13% Similarity=0.027 Sum_probs=64.6
Q ss_pred CccEEEEEcCCCCCChHHHHHHHHHHHhC--CCeEEEEeCCCChh----hhhhhccCCCCCCeeEEEcCCCCCCCCCChh
Q 042753 4 AGAHILVYPFPTSGHIIPLLDLTNRLLTL--GLNVTVLITQNNLP----LLDSLNANHPSTSLQSLVLPQPKWPAGSPAT 77 (473)
Q Consensus 4 ~~~~Il~~~~~~~GH~~p~l~La~~L~~r--Gh~Vt~~~~~~~~~----~i~~~~~~~~~~~~~f~~l~~~~~~~~~~~~ 77 (473)
+|+||+|+..+. |+ -+.++.++|.+. +++|..+.+..... +.++. ++.+..++.. .+..
T Consensus 21 ~~~rI~~l~SG~-g~--~~~~~l~~l~~~~~~~~I~~Vvt~~~~~~~~~~A~~~-------gIp~~~~~~~---~~~~-- 85 (229)
T 3auf_A 21 HMIRIGVLISGS-GT--NLQAILDGCREGRIPGRVAVVISDRADAYGLERARRA-------GVDALHMDPA---AYPS-- 85 (229)
T ss_dssp TCEEEEEEESSC-CH--HHHHHHHHHHTTSSSEEEEEEEESSTTCHHHHHHHHT-------TCEEEECCGG---GSSS--
T ss_pred CCcEEEEEEeCC-cH--HHHHHHHHHHhCCCCCeEEEEEcCCCchHHHHHHHHc-------CCCEEEECcc---cccc--
Confidence 478998887655 33 477888888876 68887766553212 22222 6776654421 1110
Q ss_pred hHHHHHHHHHHHhhHHHHHHHhcCCCCCcEEEeCCCcc-hHHHHHHHhCCCcEEEecc
Q 042753 78 RLLKFMRVLRELHYPALLDWFKSHPSPPVAILSDFFLG-WTQGLAAELGLPRVVFSPS 134 (473)
Q Consensus 78 ~~~~~~~~~~~~~~~~l~~~l~~~~~~pD~VV~D~~~~-~~~~~A~~~giP~v~~~~~ 134 (473)
++...+.+.+.|++. +||+||+-.+.. ....+-..+...++-++++
T Consensus 86 ---------r~~~~~~~~~~l~~~--~~Dliv~agy~~IL~~~~l~~~~~~~iNiHpS 132 (229)
T 3auf_A 86 ---------RTAFDAALAERLQAY--GVDLVCLAGYMRLVRGPMLTAFPNRILNIHPS 132 (229)
T ss_dssp ---------HHHHHHHHHHHHHHT--TCSEEEESSCCSCCCHHHHHHSTTCEEEEESS
T ss_pred ---------hhhccHHHHHHHHhc--CCCEEEEcChhHhCCHHHHhhccCCEEEEccC
Confidence 113446677888889 999999876643 4455555666666776665
|
| >3ug7_A Arsenical pump-driving ATPase; tail-anchored, membrane protein, targeting factor, ATP-bindi TRC40, ARSA, nucleotide-binding; HET: ADP; 2.90A {Methanocaldococcus jannaschii} PDB: 3ug6_A* | Back alignment and structure |
|---|
Probab=82.96 E-value=13 Score=34.84 Aligned_cols=47 Identities=17% Similarity=0.185 Sum_probs=38.2
Q ss_pred CccEEEEEc-CCCCCChHHHHHHHHHHHhCCCeEEEEeCCCChhhhhhh
Q 042753 4 AGAHILVYP-FPTSGHIIPLLDLTNRLLTLGLNVTVLITQNNLPLLDSL 51 (473)
Q Consensus 4 ~~~~Il~~~-~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~i~~~ 51 (473)
.|++|++++ -++-|-..-...||..|+++|++|.++..+.. ..+...
T Consensus 24 ~~~~i~v~sgKGGvGKTTvA~~LA~~lA~~G~rVLlvD~D~~-~~l~~~ 71 (349)
T 3ug7_A 24 DGTKYIMFGGKGGVGKTTMSAATGVYLAEKGLKVVIVSTDPA-HSLRDI 71 (349)
T ss_dssp CSCEEEEEECSSSTTHHHHHHHHHHHHHHSSCCEEEEECCTT-CHHHHH
T ss_pred CCCEEEEEeCCCCccHHHHHHHHHHHHHHCCCeEEEEeCCCC-CCHHHH
Confidence 477887666 67779999999999999999999999999874 344433
|
| >3n7t_A Macrophage binding protein; seattle structural genomics center for infectious disease, S macrophage, pathogenic fungus, coccidioidomycosis; 2.10A {Coccidioides immitis} SCOP: c.23.16.0 | Back alignment and structure |
|---|
Probab=82.78 E-value=2.2 Score=37.96 Aligned_cols=42 Identities=24% Similarity=0.241 Sum_probs=30.5
Q ss_pred CCCCccEEEEEcCCCC----------C-ChHHHHHHHHHHHhCCCeEEEEeCC
Q 042753 1 MLPAGAHILVYPFPTS----------G-HIIPLLDLTNRLLTLGLNVTVLITQ 42 (473)
Q Consensus 1 ~~~~~~~Il~~~~~~~----------G-H~~p~l~La~~L~~rGh~Vt~~~~~ 42 (473)
|++.|+||+++..... | ...=++.-...|.+.|++|+++++.
T Consensus 5 m~~~mkkvlvvlt~~~~~~~~~g~~tG~~~~E~~~p~~~l~~aG~~V~~aSp~ 57 (247)
T 3n7t_A 5 MAPLPRKALLAITSAHPPFWPDGKRTGLFFSEALHPFNELTAAGFEVDVASET 57 (247)
T ss_dssp --CCCSEEEEECCCCCCBCSTTSCBCCBCHHHHHHHHHHHHHTTCEEEEEESS
T ss_pred ccccCCeEEEEECCCCcccCCCCCCCcccHHHHHHHHHHHHHCCCEEEEEeCC
Confidence 6667899998776532 2 1444777788999999999999975
|
| >3lyu_A Putative hydrogenase; the C-terminal has AN alpha-beta fold, structural genomics, PSI-2, protein structure initiative; 2.30A {Pyrococcus furiosus} | Back alignment and structure |
|---|
Probab=82.74 E-value=12 Score=29.75 Aligned_cols=110 Identities=14% Similarity=0.046 Sum_probs=61.4
Q ss_pred ccEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCCCC------hhhhhhhccCCCCCCeeEEEcCCCCCCCCCChhh
Q 042753 5 GAHILVYPFPTSGHIIPLLDLTNRLLTLGLNVTVLITQNN------LPLLDSLNANHPSTSLQSLVLPQPKWPAGSPATR 78 (473)
Q Consensus 5 ~~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~------~~~i~~~~~~~~~~~~~f~~l~~~~~~~~~~~~~ 78 (473)
..++++++.+. =+.|++++++.|.++|.+|+++ .... .+.+++.. ..+.+....... .-...+.
T Consensus 18 ~~~~llIaGG~--GiaPl~sm~~~l~~~~~~v~l~-g~R~~~~~~~~~el~~l~-----~~~~~~~~~~~~--~~~~~d~ 87 (142)
T 3lyu_A 18 FGKILAIGAYT--GIVEVYPIAKAWQEIGNDVTTL-HVTFEPMVILKEELEKAV-----TRHIVEPVPLNP--NQDFLAN 87 (142)
T ss_dssp CSEEEEEEETT--HHHHHHHHHHHHHHTTCEEEEE-EEEEGGGCCSHHHHHTTS-----SEEEEEEECCCT--TSCHHHH
T ss_pred CCeEEEEECcC--cHHHHHHHHHHHHhcCCcEEEE-EeCCHHHhhHHHHHHHHH-----hheEEEEeeccc--ccCCCCC
Confidence 56788877654 4899999999999999999998 5432 23333321 123333221110 0001121
Q ss_pred HHHHHHHHHHHhhHHHHHHHhcCCCCCc-EEEeCCCcc--hHHHHHHHhCCCcEE
Q 042753 79 LLKFMRVLRELHYPALLDWFKSHPSPPV-AILSDFFLG--WTQGLAAELGLPRVV 130 (473)
Q Consensus 79 ~~~~~~~~~~~~~~~l~~~l~~~~~~pD-~VV~D~~~~--~~~~~A~~~giP~v~ 130 (473)
+..... ...+.+.+++.+. +.| +.+|.+... .....++++|||..-
T Consensus 88 ~~g~~G----~v~~~l~~~~~~~--~~~~vy~CGP~~Mm~av~~~l~~~~~~~~~ 136 (142)
T 3lyu_A 88 MKNVSQ----RLKEKVRELLESE--DWDLVFMVGPVGDQKQVFEVVKEYGVPMLE 136 (142)
T ss_dssp HHHHHH----HHHHHHHHHHHSS--CCSEEEEESCHHHHHHHHHHHHHHTCCBC-
T ss_pred CCCCcc----chhHHHHHhcccC--CCCEEEEECCHHHHHHHHHHHHHcCCchhh
Confidence 111111 2223455666665 556 667776533 456788899999753
|
| >1j9j_A Stationary phase surviVal protein; SURE protein, unknown function; 1.90A {Thermotoga maritima} SCOP: c.106.1.1 PDB: 1ilv_A 1j9k_A* 1j9l_A* | Back alignment and structure |
|---|
Probab=81.92 E-value=3.9 Score=36.19 Aligned_cols=109 Identities=15% Similarity=-0.004 Sum_probs=58.5
Q ss_pred cEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCCCChhhhhhhccCCCCCCeeEEEcCCC-C-----CCCCCChhhH
Q 042753 6 AHILVYPFPTSGHIIPLLDLTNRLLTLGLNVTVLITQNNLPLLDSLNANHPSTSLQSLVLPQP-K-----WPAGSPATRL 79 (473)
Q Consensus 6 ~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~i~~~~~~~~~~~~~f~~l~~~-~-----~~~~~~~~~~ 79 (473)
||||+.-==+. |--=+..|+++|.+.| +|+++.+...+.-....+. ....+++..++.. . .++-| .
T Consensus 1 M~ILlTNDDGi-~apGi~aL~~~l~~~g-~V~VVAP~~~~Sg~g~siT--l~~pl~~~~~~~~~~~~~~~v~GTP-a--- 72 (247)
T 1j9j_A 1 MRILVTNDDGI-QSKGIIVLAELLSEEH-EVFVVAPDKERSATGHSIT--IHVPLWMKKVFISERVVAYSTTGTP-A--- 72 (247)
T ss_dssp CEEEEECSSCT-TCHHHHHHHHHHTTTS-EEEEEEESSCCTTCTTCCC--CSSCCCEEECCCSSSEEEEEESSCH-H---
T ss_pred CeEEEEcCCCC-CcHhHHHHHHHHHhCC-CEEEEecCCCCcCCccccc--CCCCeEEEEeccCCCCceEEECCcH-H---
Confidence 36666552222 2233778899998888 8999999876544333221 1112444444321 0 01111 0
Q ss_pred HHHHHHHHHHhhHHHHHHHhcCCCCCcEEEe----------CCCcc---hHHHHHHHhCCCcEEEec
Q 042753 80 LKFMRVLRELHYPALLDWFKSHPSPPVAILS----------DFFLG---WTQGLAAELGLPRVVFSP 133 (473)
Q Consensus 80 ~~~~~~~~~~~~~~l~~~l~~~~~~pD~VV~----------D~~~~---~~~~~A~~~giP~v~~~~ 133 (473)
+ -..-.+..++ .. +||+||+ |.+++ .++.-|..+|||.|.++.
T Consensus 73 ----D----CV~lal~~l~-~~--~PDLVvSGIN~G~Nlg~dv~ySGTVgAA~Ea~~~GiPaIA~S~ 128 (247)
T 1j9j_A 73 ----D----CVKLAYNVVM-DK--RVDLIVSGVNRGPNMGMDILHSGTVSGAMEGAMMNIPSIAISS 128 (247)
T ss_dssp ----H----HHHHHHHTTS-TT--CCSEEEEEEEESCCCGGGGGGCHHHHHHHHHHHTTCCEEEEEE
T ss_pred ----H----HHHHHHHhhc-cC--CCCEEEECCccCCCCCcCeecchhHHHHHHHHhcCCCeEEEec
Confidence 0 1112333334 34 8999995 33333 234555678999999865
|
| >2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A* | Back alignment and structure |
|---|
Probab=81.61 E-value=0.57 Score=45.46 Aligned_cols=40 Identities=15% Similarity=0.193 Sum_probs=30.7
Q ss_pred CccEEEEEcCC---C--CCChHHHHHHHHHHHhCCCeEEEEeCCC
Q 042753 4 AGAHILVYPFP---T--SGHIIPLLDLTNRLLTLGLNVTVLITQN 43 (473)
Q Consensus 4 ~~~~Il~~~~~---~--~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 43 (473)
.++||+++... + .|=......++++|+++||+|++++...
T Consensus 45 ~~mrI~~v~~~~~p~~~~GG~~~v~~la~~L~~~GheV~Vvt~~~ 89 (413)
T 2x0d_A 45 KGKRLNLLVPSINQEHMFGGISTALKLFEQFDNKKFKKRIILTDA 89 (413)
T ss_dssp CSCEEEEEESCCCGGGCSHHHHHHHHHHTTSCTTTCEEEEEESSC
T ss_pred CCceEEEEeCCCCccccccHHHHHHHHHHHHHHcCCceEEEEecC
Confidence 47899866622 2 2444568999999999999999999864
|
| >2bw0_A 10-FTHFDH, 10-formyltetrahydrofolate dehydrogenase; nucleotide biosynthesis, oxidoreductase; 1.7A {Homo sapiens} SCOP: b.46.1.1 c.65.1.1 PDB: 2cfi_A* 1s3i_A | Back alignment and structure |
|---|
Probab=81.31 E-value=6.7 Score=36.46 Aligned_cols=100 Identities=11% Similarity=0.057 Sum_probs=56.4
Q ss_pred cEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCCCC--------hhhhhhhccCCCCCCeeEEEcCCCCCCCCCChh
Q 042753 6 AHILVYPFPTSGHIIPLLDLTNRLLTLGLNVTVLITQNN--------LPLLDSLNANHPSTSLQSLVLPQPKWPAGSPAT 77 (473)
Q Consensus 6 ~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~--------~~~i~~~~~~~~~~~~~f~~l~~~~~~~~~~~~ 77 (473)
+||+|+ |--+-...+.++|.+.||+|..+.+... .+...+. ++.+...+. +...
T Consensus 23 mrIvf~-----G~~~fa~~~L~~L~~~~~~i~~Vvt~pd~~~~~~~v~~~A~~~-------gIpv~~~~~-----~~~~- 84 (329)
T 2bw0_A 23 MKIAVI-----GQSLFGQEVYCHLRKEGHEVVGVFTVPDKDGKADPLGLEAEKD-------GVPVFKYSR-----WRAK- 84 (329)
T ss_dssp CEEEEE-----CCHHHHHHHHHHHHHTTCEEEEEEECCCCSSCCCHHHHHHHHH-------TCCEEECSC-----CEET-
T ss_pred CEEEEE-----cCcHHHHHHHHHHHHCCCeEEEEEeCCCcCCCCCHHHHHHHHc-------CCCEEecCc-----cccc-
Confidence 689888 2223344577899999999987766221 1112222 455443321 0000
Q ss_pred hHHHHHHHHHHHhhHHHHHHHhcCCCCCcEEEeCCCcc-hHHHHHHHhCCCcEEEecch
Q 042753 78 RLLKFMRVLRELHYPALLDWFKSHPSPPVAILSDFFLG-WTQGLAAELGLPRVVFSPSG 135 (473)
Q Consensus 78 ~~~~~~~~~~~~~~~~l~~~l~~~~~~pD~VV~D~~~~-~~~~~A~~~giP~v~~~~~~ 135 (473)
....+.+.+.+++. +||++|+-.+.. ....+-......++-++++.
T Consensus 85 ----------~~~~~~~~~~l~~~--~~Dliv~a~y~~ilp~~il~~~~~g~iNiHpSL 131 (329)
T 2bw0_A 85 ----------GQALPDVVAKYQAL--GAELNVLPFCSQFIPMEIISAPRHGSIIYHPSL 131 (329)
T ss_dssp ----------TEECHHHHHHHHTT--CCSEEEESSCSSCCCHHHHTCSTTCEEEEESSC
T ss_pred ----------ccccHHHHHHHHhc--CCCEEEEeehhhhCCHHHHhhCcCCEEEEcCCc
Confidence 01224556678888 999999876633 33444444455567776664
|
| >1l5x_A SurviVal protein E; structural genomics, putative acid phosphatase, mixed alpha/ protein, N-terminal rossmann-fold like; 2.00A {Pyrobaculum aerophilum} SCOP: c.106.1.1 | Back alignment and structure |
|---|
Probab=80.82 E-value=5.4 Score=36.00 Aligned_cols=109 Identities=20% Similarity=0.106 Sum_probs=58.8
Q ss_pred cEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCCCChhhhhhhccCCCCCCeeEEEcCCCC-----CCCCCChhhHH
Q 042753 6 AHILVYPFPTSGHIIPLLDLTNRLLTLGLNVTVLITQNNLPLLDSLNANHPSTSLQSLVLPQPK-----WPAGSPATRLL 80 (473)
Q Consensus 6 ~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~i~~~~~~~~~~~~~f~~l~~~~-----~~~~~~~~~~~ 80 (473)
||||+.-==|. +---+..|++.|.+.| +|+++.+...+.-....+. ....+++..++... .++-| .
T Consensus 1 M~ILlTNDDGi-~ApGi~aL~~aL~~~g-~V~VVAP~~~qSg~g~siT--l~~pl~~~~~~~~~~~~~~v~GTP-a---- 71 (280)
T 1l5x_A 1 MKILVTNDDGV-HSPGLRLLYQFALSLG-DVDVVAPESPKSATGLGIT--LHKPLRMYEVDLCGFRAIATSGTP-S---- 71 (280)
T ss_dssp CEEEEECSSCT-TCHHHHHHHHHHGGGS-EEEEEEESSCTTTSCSSCC--CSSCBCEEEEECSSSEEEEESSCH-H----
T ss_pred CeEEEEcCCCC-CcHhHHHHHHHHHhCC-CEEEEecCCCCcCCccccc--CCCCeEEEEeccCCCceEEECCcH-H----
Confidence 36666652222 2233778899999988 8999999876544333221 11124444432210 01111 1
Q ss_pred HHHHHHHHHhhHHHHHHHhcCCCCCcEEEeC-----------CCcc---hHHHHHHHhCCCcEEEecc
Q 042753 81 KFMRVLRELHYPALLDWFKSHPSPPVAILSD-----------FFLG---WTQGLAAELGLPRVVFSPS 134 (473)
Q Consensus 81 ~~~~~~~~~~~~~l~~~l~~~~~~pD~VV~D-----------~~~~---~~~~~A~~~giP~v~~~~~ 134 (473)
+ ...-.+..+ .. +||+||+. .+.+ .++.-|..+|||.|.++..
T Consensus 72 ---D----CV~lal~~l--~~--~PDLVvSGIN~G~Nlg~d~v~ySGTVgAA~Ea~~~GiPaIA~S~~ 128 (280)
T 1l5x_A 72 ---D----TVYLATFGL--GR--KYDIVLSGINLGDNTSLQVILSSGTLGAAFQAALLGIPALAYSAY 128 (280)
T ss_dssp ---H----HHHHHHHHH--TS--CCSEEEEEEEEBCCCSHHHHTTCHHHHHHHHHHHTTCCEEEEEEC
T ss_pred ---H----HHHHHHhcC--CC--CCCEEEECCccCCcCCccccccchhHHHHHHHHHcCCCeEEEEcc
Confidence 0 111233333 45 89999963 3333 2344556789999999763
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 473 | ||||
| d2vcha1 | 471 | c.87.1.10 (A:6-476) Hydroquinone glucosyltransfera | 2e-76 | |
| d2pq6a1 | 473 | c.87.1.10 (A:8-480) (Iso)flavonoid glycosyltransfe | 3e-73 | |
| d2c1xa1 | 450 | c.87.1.10 (A:7-456) UDP glucose:flavonoid 3-o-gluc | 4e-67 | |
| d2acva1 | 461 | c.87.1.10 (A:3-463) Triterpene UDP-glucosyl transf | 2e-63 | |
| d1rrva_ | 401 | c.87.1.5 (A:) TDP-vancosaminyltransferase GftD {Am | 4e-34 | |
| d1iira_ | 401 | c.87.1.5 (A:) UDP-glucosyltransferase GtfB {Amycol | 2e-30 | |
| d1pn3a_ | 391 | c.87.1.5 (A:) TDP-epi-vancosaminyltransferase GtfA | 1e-23 |
| >d2vcha1 c.87.1.10 (A:6-476) Hydroquinone glucosyltransferase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 471 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDPGT-like domain: Hydroquinone glucosyltransferase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Score = 245 bits (624), Expect = 2e-76
Identities = 131/476 (27%), Positives = 205/476 (43%), Gaps = 27/476 (5%)
Query: 7 HILVYPFPTSGHIIPLLDLTNRLLTL-GLNVTVLITQNNLP-LLDSLNANHPSTSLQSLV 64
H+ + P P GH+IPL++ RL+ L GL VT +I P + +S+ S+
Sbjct: 3 HVAIIPSPGMGHLIPLVEFAKRLVHLHGLTVTFVIAGEGPPSKAQRTVLDSLPSSISSVF 62
Query: 65 LPQPKWPAGSPATRLLKFMRVLRELHYPALLDWFKSH---PSPPVAILSDFFLGWTQGLA 121
LP S +TR+ + + P L F S P A++ D F +A
Sbjct: 63 LPPVDLTDLSSSTRIESRISLTVTRSNPELRKVFDSFVEGGRLPTALVVDLFGTDAFDVA 122
Query: 122 AELGLPRVVFSPSGAFALSVSFAMWTDLPTNDDPDNVDALVSFPRVPNCPVYPWYQISHL 181
E +P +F P+ A LS + L +P C
Sbjct: 123 VEFHVPPYIFYPTTANVLSFFLHLPK--LDETVSCEFRELTEPLMLPGCVPVAGKDFLDP 180
Query: 182 YRTLKEGDPDWDLHRSNMMANKTSWGIVFNSFAELERVYIDHMKKEMGHDRVWAVGPVLP 241
+ K D + N K + GI+ N+F ELE I +++ PV P
Sbjct: 181 AQDRK--DDAYKWLLHNTKRYKEAEGILVNTFFELEPNAIKALQEPGLD-----KPPVYP 233
Query: 242 PDDDLVESMCRGGSSSVPAHDVLTWLDSRRDESVVYVCFGSRYVLTAKQIHELAAALEKT 301
+ + + L WLD++ SV+YV FGS LT +Q++ELA L +
Sbjct: 234 VGPLVNIGKQE--AKQTEESECLKWLDNQPLGSVLYVSFGSGGTLTCEQLNELALGLADS 291
Query: 302 DVDFVYCVREP---------DERHASQDCGVLPDGFEDRVAGRGYVIRGWSQQVAILRHK 352
+ F++ +R P D + LP GF +R RG+VI W+ Q +L H
Sbjct: 292 EQRFLWVIRSPSGIANSSYFDSHSQTDPLTFLPPGFLERTKKRGFVIPFWAPQAQVLAHP 351
Query: 353 AVGAFLTHCGWNSVLEGVSAGVVMLTWPMDADQYTNAQLLVDQLGVGIRVGEGTRNIPES 412
+ G FLTHCGWNS LE V +G+ ++ WP+ A+Q NA LL + + +R G +
Sbjct: 352 STGGFLTHCGWNSTLESVVSGIPLIAWPLYAEQKMNAVLLSEDIRAALRPRAGDDGLVRR 411
Query: 413 DELARLLAQSVDGPRRE--RLKARELSGAALSAVVKGGSSDRDLNDFIKRINELKS 466
+E+AR++ ++G + R K +EL AA + G+S + L+ + K
Sbjct: 412 EEVARVVKGLMEGEEGKGVRNKMKELKEAACRVLKDDGTSTKALSLVALKWKAHKK 467
|
| >d2pq6a1 c.87.1.10 (A:8-480) (Iso)flavonoid glycosyltransferase {Medicago truncatula [TaxId: 3880]} Length = 473 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDPGT-like domain: (Iso)flavonoid glycosyltransferase species: Medicago truncatula [TaxId: 3880]
Score = 236 bits (603), Expect = 3e-73
Identities = 113/476 (23%), Positives = 181/476 (38%), Gaps = 29/476 (6%)
Query: 7 HILVYPFPTSGHIIPLLDLTNRLLTLGLNVTVLITQNNLPLLDSLNANHPSTSLQSLVLP 66
H+++ P+P GHI PL L L G ++T + T+ N L
Sbjct: 3 HVVMIPYPVQGHINPLFKLAKLLHLRGFHITFVNTEYNHKRLLKSRGPKAFDGFTDFNFE 62
Query: 67 Q------PKWPAGSPATRLLKFMRVLRELHYPALLDWFKSH-----PSPPVAILSDFFLG 115
P G + + + +R+ + P ++SD +
Sbjct: 63 SIPDGLTPMEGDGDVSQDVPTLCQSVRKNFLKPYCELLTRLNHSTNVPPVTCLVSDCCMS 122
Query: 116 WTQGLAAELGLPRVVFSPSGAFALSVSFAMW-------TDLPTNDDPDNVDALVSFPRVP 168
+T A E LP V++ S A +L N +P
Sbjct: 123 FTIQAAEEFELPNVLYFSSSACSLLNVMHFRSFVERGIIPFKDESYLTNGCLETKVDWIP 182
Query: 169 NCPVYPWYQISHLYRTLKEGDPDWDLHRSNMMANKTSWGIVFNSFAELERVYIDHMKKEM 228
+ I RT D + I+ N+F ELE I+ + +
Sbjct: 183 GLKNFRLKDIVDFIRTTNPNDIMLEFFIEVADRVNKDTTILLNTFNELESDVINALSSTI 242
Query: 229 GHDRVWAVGPVLPPDDDLVESMC-RGGSSSVPAHDVLTWLDSRRDESVVYVCFGSRYVLT 287
P L + + + + L WL+S+ SVVYV FGS V+T
Sbjct: 243 PSIYPIGPLPSLLKQTPQIHQLDSLDSNLWKEDTECLDWLESKEPGSVVYVNFGSTTVMT 302
Query: 288 AKQIHELAAALEKTDVDFVYCVREPDERHASQDCGVLPDGFEDRVAGRGYVIRGWSQQVA 347
+Q+ E A L F++ +R + F + +A RG + W Q
Sbjct: 303 PEQLLEFAWGLANCKKSFLWIIRPDLVIG---GSVIFSSEFTNEIADRGLIAS-WCPQDK 358
Query: 348 ILRHKAVGAFLTHCGWNSVLEGVSAGVVMLTWPMDADQYTNAQLLVDQLGVGIRVGEGTR 407
+L H ++G FLTHCGWNS E + AGV ML WP ADQ T+ + + ++ +G+ +
Sbjct: 359 VLNHPSIGGFLTHCGWNSTTESICAGVPMLCWPFFADQPTDCRFICNEWEIGMEIDTN-- 416
Query: 408 NIPESDELARLLAQSVDGPRRE--RLKARELSGAALSAVVKGGSSDRDLNDFIKRI 461
+ +ELA+L+ + + G + + + KA EL A GG S +LN IK +
Sbjct: 417 --VKREELAKLINEVIAGDKGKKMKQKAMELKKKAEENTRPGGCSYMNLNKVIKDV 470
|
| >d2c1xa1 c.87.1.10 (A:7-456) UDP glucose:flavonoid 3-o-glucosyltransferase {Grape (Vitis vinifera) [TaxId: 29760]} Length = 450 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDPGT-like domain: UDP glucose:flavonoid 3-o-glucosyltransferase species: Grape (Vitis vinifera) [TaxId: 29760]
Score = 220 bits (559), Expect = 4e-67
Identities = 103/468 (22%), Positives = 175/468 (37%), Gaps = 31/468 (6%)
Query: 7 HILVYPFPTSGHIIPLLDLTNRLLTLGLNVTVLITQNNLPLLDSLNANHPSTSLQ----- 61
H+ V FP S H PLL + RL + + + + +
Sbjct: 3 HVAVLAFPFSTHAAPLLAVVRRLAAAAPHAVFSFFSTSQSNASIFHDSMHTMQCNIKSYD 62
Query: 62 -SLVLPQPKWPAGSPATRLLKFMRVLRELHYPALLDWFKSHPSPPVAILSDFFLGWTQGL 120
S +P+ AG P + F R E ++ P +++D F+ + +
Sbjct: 63 ISDGVPEGYVFAGRPQEDIELFTRAAPESFRQGMVMAVAETGRPVSCLVADAFIWFAADM 122
Query: 121 AAELGLPRVVFSPSGAFALSVSFAMWTDLPTNDDPDNVDALVSFPRV-PNCPVYPWYQIS 179
AAE+G+ + F +G +LS + P + +
Sbjct: 123 AAEMGVAWLPFWTAGPNSLSTHVYIDEIREKIGVSGIQGREDELLNFIPGMSKVRFRDLQ 182
Query: 180 HLYRTLKEGDPDWDLHRSNMMANKTSWGIVFNSFAELERVYIDHMKKEMGHDRVWAVGPV 239
+ + + NSF EL+ + +K + +GP
Sbjct: 183 EGIVFGNLNSLFSRMLHRMGQVLPKATAVFINSFEELDDSLTNDLKSK--LKTYLNIGPF 240
Query: 240 LPPDDDLVESMCRGGSSSVPAHDVLTWLDSRRDESVVYVCFGSRYVLTAKQIHELAAALE 299
++ L WL R+ SVVY+ FG+ ++ L+ ALE
Sbjct: 241 ---------NLITPPPVVPNTTGCLQWLKERKPTSVVYISFGTVTTPPPAEVVALSEALE 291
Query: 300 KTDVDFVYCVREPDERHASQDCGVLPDGFEDRVAGRGYVIRGWSQQVAILRHKAVGAFLT 359
+ V F++ +R+ LP+GF ++ G G V+ Q +L H+AVGAF+T
Sbjct: 292 ASRVPFIWSLRDKAR-------VHLPEGFLEKTRGYGMVVPWAPQA-EVLAHEAVGAFVT 343
Query: 360 HCGWNSVLEGVSAGVVMLTWPMDADQYTNAQLLVDQLGVGIRVGEGTRNIPESDELARLL 419
HCGWNS+ E V+ GV ++ P DQ N +++ D L +G+R+ G L
Sbjct: 344 HCGWNSLWESVAGGVPLICRPFFGDQRLNGRMVEDVLEIGVRIEGGV---FTKSGLMSCF 400
Query: 420 AQSVDGPRRE--RLKARELSGAALSAVVKGGSSDRDLNDFIKRINELK 465
Q + + + R R L A AV GSS + + +++ K
Sbjct: 401 DQILSQEKGKKLRENLRALRETADRAVGPKGSSTENFITLVDLVSKPK 448
|
| >d2acva1 c.87.1.10 (A:3-463) Triterpene UDP-glucosyl transferase UGT71G1 {Medicago truncatula [TaxId: 3880]} Length = 461 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDPGT-like domain: Triterpene UDP-glucosyl transferase UGT71G1 species: Medicago truncatula [TaxId: 3880]
Score = 210 bits (534), Expect = 2e-63
Identities = 116/470 (24%), Positives = 201/470 (42%), Gaps = 28/470 (5%)
Query: 4 AGAHILVYPFPTSGHIIPLLDLTNRLLTLGLNVTVLI---TQNNLPLLDSLNANHPST-- 58
+ ++ P P GH+ L+ L N+ + + +P DS + ++
Sbjct: 6 KNSELIFIPAPGIGHLASALEFAKLLTNHDKNLYITVFCIKFPGMPFADSYIKSVLASQP 65
Query: 59 SLQSLVLPQPKWPAGSPATRLLKFMRVLRELHYPALLDWFKSH-PSPPVAILSDFFLGWT 117
+Q + LP+ + P ++ E P + K+ + V ++ DFF
Sbjct: 66 QIQLIDLPEVEPPPQELLKSPEFYILTFLESLIPHVKATIKTILSNKVVGLVLDFFCVSM 125
Query: 118 QGLAAELGLPRVVFSPSGAFALSVSFAMWTDLPTNDDPDNVDALVSFPRVPNCPVYPWYQ 177
+ E G+P +F S LS+ ++ + D+ D +P
Sbjct: 126 IDVGNEFGIPSYLFLTSNVGFLSLMLSLKN-RQIEEVFDDSDRDHQLLNIPGISNQVPSN 184
Query: 178 ISHLYRTLKEGDPDWDLHRSNMMANKTSWGIVFNSFAELERVYIDHMKKEMGH-DRVWAV 236
+ K+G + + + GI+ N+F++LE+ ID + ++AV
Sbjct: 185 VLPDACFNKDGGYIAYYKLAERFRD--TKGIIVNTFSDLEQSSIDALYDHDEKIPPIYAV 242
Query: 237 GPVLPPDDDLVESMCRGGSSSVPAHDVLTWLDSRRDESVVYVC-FGSRYVLTAKQIHELA 295
GP+L +L WLD + D+SVV++C QI E+A
Sbjct: 243 GPLLDLKGQPNPK-----LDQAQHDLILKWLDEQPDKSVVFLCFGSMGVSFGPSQIREIA 297
Query: 296 AALEKTDVDFVYCVREPDERHASQDCGVLPDGFEDRVAGRG-YVIRGWSQQVAILRHKAV 354
L+ + V F++ + V P+GF + + G +I GW+ QV +L HKA+
Sbjct: 298 LGLKHSGVRFLWSNSA--------EKKVFPEGFLEWMELEGKGMICGWAPQVEVLAHKAI 349
Query: 355 GAFLTHCGWNSVLEGVSAGVVMLTWPMDADQYTNAQLLVDQLGVGIRVGEGTRN---IPE 411
G F++HCGWNS+LE + GV +LTWP+ A+Q NA LV + GVG+ + R +
Sbjct: 350 GGFVSHCGWNSILESMWFGVPILTWPIYAEQQLNAFRLVKEWGVGLGLRVDYRKGSDVVA 409
Query: 412 SDELARLLAQSVDGPRRERLKARELSGAALSAVVKGGSSDRDLNDFIKRI 461
++E+ + L +D K +E+ + +AVV GGSS + I I
Sbjct: 410 AEEIEKGLKDLMDKDSIVHKKVQEMKEMSRNAVVDGGSSLISVGKLIDDI 459
|
| >d1rrva_ c.87.1.5 (A:) TDP-vancosaminyltransferase GftD {Amycolatopsis orientalis [TaxId: 31958]} Length = 401 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Gtf glycosyltransferase domain: TDP-vancosaminyltransferase GftD species: Amycolatopsis orientalis [TaxId: 31958]
Score = 130 bits (326), Expect = 4e-34
Identities = 69/433 (15%), Positives = 115/433 (26%), Gaps = 52/433 (12%)
Query: 8 ILVYPFPTSGHIIPLLDLTNRLLTLGLNVTVLITQNNLPLLDSLNANHPSTSLQSLVLPQ 67
+L+ T G + + L +RL LG+ + L + H L +
Sbjct: 3 VLLSVCGTRGDVEIGVALADRLKALGVQTRMCAPPAAEERLAEVGVPHVPVGL-PQHMML 61
Query: 68 PKWPAGSPATRLLKFMRVLRELHYPALLDWFKSHPSPPVAILSDFFLGWTQGLAAELGLP 127
+ P + + E+ + A+ + VA+ + +A +LGLP
Sbjct: 62 QEGMPPPPPEEEQRLAAMTVEMQFDAVPGAAEGCA-AVVAVGDLAAATGVRSVAEKLGLP 120
Query: 128 RVVFSPSGAFALSVSFAMWTDLPTNDDPDNVDALVSFPRVPNCPVYPWYQISHLYRTLKE 187
PS + S D PT P D V + +
Sbjct: 121 FFYSVPSPVYLASPHLPPAYDEPTT--PGVTDIRVLWEERAARFADRY------------ 166
Query: 188 GDPDWDLHRSNMMANKTSWGIVFNSFAELERVYIDHMKKEMGHDRVWAVGPVLPPDDDLV 247
G + + L + D V +L + L
Sbjct: 167 GPTLNRRRAEIGLPPVEDVFGYGHGERPLLAADPVLAPLQPDVDAVQTGAWLLSDERPLP 226
Query: 248 ESMCRGGSSSVPAHDVLTWLDSRRDESVVYVCFGSRYVLTAKQIHELAAALEKTDVDFVY 307
+ V++ FGS ++A + V
Sbjct: 227 PEL---------------EAFLAAGSPPVHIGFGSSSGRGIADAAKVAVEAIRAQGRRVI 271
Query: 308 CVREPDERHASQDCGVLPDGFEDRVAGRGYVIRGWSQQVAILRHKAVGAFLTHCGWNSVL 367
R E D A+ R V A + H +
Sbjct: 272 LSRGWTELVLPDD-------------RDDCFAIDEVNFQALFRR--VAAVIHHGSAGTEH 316
Query: 368 EGVSAGVVMLTWPMDADQYTNAQLLVDQLGVGIRVGEGTRNIPESDELARLLAQSVDGPR 427
AGV L P + DQ A + LG+G+ T P + L+ L +
Sbjct: 317 VATRAGVPQLVIPRNTDQPYFAGRVAA-LGIGVAHDGPT---PTFESLSAALTTVLAPET 372
Query: 428 RERLKARELSGAA 440
R R A ++G
Sbjct: 373 RAR--AEAVAGMV 383
|
| >d1iira_ c.87.1.5 (A:) UDP-glucosyltransferase GtfB {Amycolatopsis orientalis [TaxId: 31958]} Length = 401 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Gtf glycosyltransferase domain: UDP-glucosyltransferase GtfB species: Amycolatopsis orientalis [TaxId: 31958]
Score = 119 bits (299), Expect = 2e-30
Identities = 59/433 (13%), Positives = 104/433 (24%), Gaps = 53/433 (12%)
Query: 8 ILVYPFPTSGHIIPLLDLTNRLLTLGLNVTVLITQNNLPLLDSLNANHPSTSLQSLVLPQ 67
+L+ + G PL+ L R+ LG +V + + L + H V P
Sbjct: 3 VLLATCGSRGDTEPLVALAVRVRDLGADVRMCAPPDCAERLAEVGVPHVP------VGPS 56
Query: 68 PKWPAGSPATRLLKFMRVLRELHYPALLDWFKSHPSPPVAILSDFFLGWTQGLAAELGLP 127
+ P + +R D + A+++ L G+ +
Sbjct: 57 ARAPIQRAKPLTAEDVRRFTTEAIATQFDEIPAAAEGCAAVVTTGLLAAAIGVRSVAEKL 116
Query: 128 RVVFSPSGAFALSVSFAMWTDLPTNDDPDNVDALVSFPRVPNCPVYPWYQISHLYRTLKE 187
+ + F + P + P + P
Sbjct: 117 GIPY-----------FYAFHCPSYVPSPYYPPPPLGEPSTQDTIDIPA---QWERNNQSA 162
Query: 188 GDPDWDLHRSNMMANKTSWGIVFNSFAELERVYIDHMKKEMGHDRVWAVGPVLPPDDDLV 247
L S+ A +F + ++ + P+ P D D V
Sbjct: 163 YQRYGGLLNSHRDAIGLPPVEDIFTFGYTDHPWVAAD---------PVLAPLQPTDLDAV 213
Query: 248 ESMCRGGSSSVPAHDVLTWLDSRRDESVVYVCFGSRYVLTAKQIHELAAALEKTDVDFVY 307
A + A+ +
Sbjct: 214 --QTGAWILPDERPLSPELAAFLDAGPPPVYLGFGSLGAPADAVRVAIDAIRAHGRRVIL 271
Query: 308 CVREPDERHASQDCGVLPDGFEDRVAGRGYVIRGWSQQVAILRHKAVGAFLTHCGWNSVL 367
G G + V A + H G +
Sbjct: 272 SRG--------------WADLVLPDDGADCFAIGEVNHQVLFGR--VAAVIHHGGAGTTH 315
Query: 368 EGVSAGVVMLTWPMDADQYTNAQLLVDQLGVGIRVGEGTRNIPESDELARLLAQSVDGPR 427
AG + P ADQ A + + LGVG+ P D L+ LA ++
Sbjct: 316 VAARAGAPQILLPQMADQPYYAGRVAE-LGVGVAHDGPI---PTFDSLSAALATALTPET 371
Query: 428 RERLKARELSGAA 440
R A ++G
Sbjct: 372 HAR--ATAVAGTI 382
|
| >d1pn3a_ c.87.1.5 (A:) TDP-epi-vancosaminyltransferase GtfA {Amycolatopsis orientalis [TaxId: 31958]} Length = 391 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Gtf glycosyltransferase domain: TDP-epi-vancosaminyltransferase GtfA species: Amycolatopsis orientalis [TaxId: 31958]
Score = 100 bits (248), Expect = 1e-23
Identities = 60/440 (13%), Positives = 110/440 (25%), Gaps = 78/440 (17%)
Query: 8 ILVYPFPTSGHIIPLLDLTNRLLTLGLNVTVLITQNNLPLLDSLNANHPSTSLQSLVLPQ 67
+L+ + G PL+ L RL LG + + + + + +
Sbjct: 3 VLITGCGSRGDTEPLVALAARLRELGADARMCLPPDYVERCAEVGVPMVPVG------RA 56
Query: 68 PKWPAGSPATRLLKFMRVLRELHYPALLDWFKSHPSPPVAILSDFFLGWT---QGLAAEL 124
+ A P V+ E+ D + A+++ L + +A +L
Sbjct: 57 VRAGAREPGELPPGAAEVVTEV-VAEWFDKVPAAIEGCDAVVTTGLLPAAVAVRSMAEKL 115
Query: 125 GLPRVVFSPSGAFALSVSFAMWTDLPTNDDPDNVDALVSFPRVPNCPVYPWYQISHLYRT 184
G+P S P + Y
Sbjct: 116 GIPYRYTVLSPDH--------------------------LPSEQSQAERDMYN--QGADR 147
Query: 185 LKEGDPDWDLHRSNMMANKTSWGIVFNSFAELERVYIDHMKKEMGHDRVWAVGPVLPPDD 244
L + + + + + L + + V +LP +
Sbjct: 148 LFGDAVNSHRASIGLPPVEHLYDYGYTDQPWLAADPVLSPLRPTDLGTVQTGAWILPDER 207
Query: 245 DLVESMCRGGSSSVPAHDVLTWLDSRRDESVVYVCFGSRYVLTAKQIHELAAALEKTDVD 304
P L + V S TA A+ +
Sbjct: 208 --------------PLSAELEAFLAAGSTPVYVGFGSSSRPATADAAKMAIKAVRASGRR 253
Query: 305 FVYCVREPDERHASQDCGVLPDGFEDRVAGRGYVIRGWSQQVAILRHKAVGAFLTHCGWN 364
V D G + G + V A + H
Sbjct: 254 IVLSRGWADL--------------VLPDDGADCFVVGEVNLQELFGR--VAAAIHHDSAG 297
Query: 365 SVLEGVSAGVVMLTWPMDAD----QYTNAQLLVDQLGVGIRVGEGTRNIPESDELARLLA 420
+ L + AG+ + D Q +A + + LGVG+ V P D L+ L
Sbjct: 298 TTLLAMRAGIPQIVVRRVVDNVVEQAYHADRVAE-LGVGVAVDGPV---PTIDSLSAALD 353
Query: 421 QSVDGPRRERLKARELSGAA 440
++ R R A ++
Sbjct: 354 TALAPEIRAR--ATTVADTI 371
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 473 | |||
| d2c1xa1 | 450 | UDP glucose:flavonoid 3-o-glucosyltransferase {Gra | 100.0 | |
| d2vcha1 | 471 | Hydroquinone glucosyltransferase {Thale cress (Ara | 100.0 | |
| d2acva1 | 461 | Triterpene UDP-glucosyl transferase UGT71G1 {Medic | 100.0 | |
| d2pq6a1 | 473 | (Iso)flavonoid glycosyltransferase {Medicago trunc | 100.0 | |
| d1rrva_ | 401 | TDP-vancosaminyltransferase GftD {Amycolatopsis or | 100.0 | |
| d1iira_ | 401 | UDP-glucosyltransferase GtfB {Amycolatopsis orient | 100.0 | |
| d1pn3a_ | 391 | TDP-epi-vancosaminyltransferase GtfA {Amycolatopsi | 100.0 | |
| d1f0ka_ | 351 | Peptidoglycan biosynthesis glycosyltransferase Mur | 99.92 | |
| d2bisa1 | 437 | Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxI | 98.99 | |
| d2iw1a1 | 370 | Lipopolysaccharide core biosynthesis protein RfaG | 98.87 | |
| d1v4va_ | 373 | UDP-N-acetylglucosamine 2-epimerase {Thermus therm | 98.81 | |
| d1o6ca_ | 377 | UDP-N-acetylglucosamine 2-epimerase {Bacillus subt | 98.71 | |
| d1f6da_ | 376 | UDP-N-acetylglucosamine 2-epimerase {Escherichia c | 98.53 | |
| d1rzua_ | 477 | Glycogen synthase 1, GlgA {Agrobacterium tumefacie | 98.33 | |
| d2f9fa1 | 166 | First mannosyl transferase WbaZ {Archaeoglobus ful | 97.81 | |
| d1pswa_ | 348 | ADP-heptose LPS heptosyltransferase II {Escherichi | 96.68 | |
| d2bfwa1 | 196 | Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxI | 96.56 | |
| d2pv7a2 | 152 | Prephenate dehydrogenase TyrA {Haemophilus influen | 93.64 | |
| d1uqta_ | 456 | Trehalose-6-phosphate synthase, OtsA {Escherichia | 89.22 | |
| d1gsoa2 | 105 | Glycinamide ribonucleotide synthetase (GAR-syn), N | 87.73 | |
| d1j9ja_ | 247 | SurE homolog TM1662 {Thermotoga maritima [TaxId: 2 | 87.21 | |
| d1p3da1 | 96 | UDP-N-acetylmuramate-alanine ligase MurC {Haemophi | 86.79 | |
| d3clsd1 | 192 | Large, alpha subunit of electron transfer flavopro | 80.28 |
| >d2c1xa1 c.87.1.10 (A:7-456) UDP glucose:flavonoid 3-o-glucosyltransferase {Grape (Vitis vinifera) [TaxId: 29760]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDPGT-like domain: UDP glucose:flavonoid 3-o-glucosyltransferase species: Grape (Vitis vinifera) [TaxId: 29760]
Probab=100.00 E-value=2.2e-55 Score=440.81 Aligned_cols=433 Identities=22% Similarity=0.338 Sum_probs=311.9
Q ss_pred cEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCCCChhhhhhhc--cCCCCCCeeEEEcCCCCCCCCC----ChhhH
Q 042753 6 AHILVYPFPTSGHIIPLLDLTNRLLTLGLNVTVLITQNNLPLLDSLN--ANHPSTSLQSLVLPQPKWPAGS----PATRL 79 (473)
Q Consensus 6 ~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~i~~~~--~~~~~~~~~f~~l~~~~~~~~~----~~~~~ 79 (473)
+||+|+|+|++||++|+++||++|++|||+|||++............ .......+++..++.....+.. ....+
T Consensus 2 ~hvl~~p~P~~gH~~p~l~la~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (450)
T d2c1xa1 2 PHVAVLAFPFSTHAAPLLAVVRRLAAAAPHAVFSFFSTSQSNASIFHDSMHTMQCNIKSYDISDGVPEGYVFAGRPQEDI 81 (450)
T ss_dssp CEEEEECCCSSSSHHHHHHHHHHHHHHCTTSEEEEEECHHHHHHHC-------CTTEEEEECCCCCCTTCCCCCCTTHHH
T ss_pred CEEEEECchhHhHHHHHHHHHHHHHHCCCcEEEEEccCccchhhhhcccccccCCCceeeecCCCCCcchhhccchHHHH
Confidence 69999999999999999999999999999999998643322211111 1111235777766532111111 11233
Q ss_pred HHHHHHHHHHhhHHHHHHHhcCCCCCcEEEeCCCcchHHHHHHHhCCCcEEEecchHHHHHHHHhhhc-----cCCCCCC
Q 042753 80 LKFMRVLRELHYPALLDWFKSHPSPPVAILSDFFLGWTQGLAAELGLPRVVFSPSGAFALSVSFAMWT-----DLPTNDD 154 (473)
Q Consensus 80 ~~~~~~~~~~~~~~l~~~l~~~~~~pD~VV~D~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~-----~~p~~~~ 154 (473)
..+.........+.+.+.++....+||+||+|.+..++..+|+++|+|++.+++.+....+....... ..|. ..
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~Dlvi~D~~~~~~~~~a~~~~~p~v~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 160 (450)
T d2c1xa1 82 ELFTRAAPESFRQGMVMAVAETGRPVSCLVADAFIWFAADMAAEMGVAWLPFWTAGPNSLSTHVYIDEIREKIGVSG-IQ 160 (450)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTCCCCEEEEETTSTTHHHHHHHHTCEEEEEECSCHHHHHHHHTHHHHHHHHCSSC-CT
T ss_pred HHHHHHHHHHhHHHHHHHHHhCCCCCeEEEECCccHHHHHHHHHhCCCEEEEecCchhhhhhhhcccccccccCCCc-cc
Confidence 33443333344455555555433389999999999999999999999999999888876655332221 1111 00
Q ss_pred CCCCCccccCCCCCCCCCCCccccchhhhccCCCCCchHHHHHHhhhccCCcEEeecchHHhhHHHHHHHHHhhCCCcEE
Q 042753 155 PDNVDALVSFPRVPNCPVYPWYQISHLYRTLKEGDPDWDLHRSNMMANKTSWGIVFNSFAELERVYIDHMKKEMGHDRVW 234 (473)
Q Consensus 155 ~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~le~~~~~~~~~~~~~~~~~ 234 (473)
..........++... ....................+.............+...+++.++....++.....++ ...
T Consensus 161 ~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~p--~~~ 235 (450)
T d2c1xa1 161 GREDELLNFIPGMSK---VRFRDLQEGIVFGNLNSLFSRMLHRMGQVLPKATAVFINSFEELDDSLTNDLKSKLK--TYL 235 (450)
T ss_dssp TCTTCBCTTSTTCTT---CBGGGSCTTTSSSCTTSHHHHHHHHHHHHGGGSSCEEESSCGGGCHHHHHHHHHHSS--CEE
T ss_pred cccccccccCCcccc---hhHhhhhhhhhcccchHHHHHHHHHHHhhhhcccccccccHHhhhhhhhhhccccCC--cee
Confidence 000000111111111 222222222222223333455666667777888888999999998888888777664 788
Q ss_pred EeccCCCCCCcchhhccCCCCCCCChhhhHHHhcCCCCCcEEEEEeCCcccCCHHHHHHHHHHHHhCCCcEEEEEeCCCc
Q 042753 235 AVGPVLPPDDDLVESMCRGGSSSVPAHDVLTWLDSRRDESVVYVCFGSRYVLTAKQIHELAAALEKTDVDFVYCVREPDE 314 (473)
Q Consensus 235 ~vGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~V~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~ 314 (473)
++|++...... ...+.++++..|+.....+++||+|+||......+++..++.++++.+++|+|+.....
T Consensus 236 ~~g~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~v~~s~gs~~~~~~~~~~~~~~~~~~~~~~vl~~~~~~~- 305 (450)
T d2c1xa1 236 NIGPFNLITPP---------PVVPNTTGCLQWLKERKPTSVVYISFGTVTTPPPAEVVALSEALEASRVPFIWSLRDKA- 305 (450)
T ss_dssp ECCCHHHHC------------------CHHHHHHTSCTTCEEEEECCSSCCCCHHHHHHHHHHHHHHTCCEEEECCGGG-
T ss_pred ecCCccccCCC---------CCCcchhhhccccccCCccceeeecccccccCCHHHHHHHHHHHHhcCCeEEEEECCCc-
Confidence 88876444311 11335577888999878899999999999999999999999999999999999987653
Q ss_pred cCCcccCCCCchhhHHhhcCCCeEeecCccHHHhhhccCccceeeccCchhHHHHHhhCCeEecCcccccchhhHHHHHH
Q 042753 315 RHASQDCGVLPDGFEDRVAGRGYVIRGWSQQVAILRHKAVGAFLTHCGWNSVLEGVSAGVVMLTWPMDADQYTNAQLLVD 394 (473)
Q Consensus 315 ~~~~~~~~~lp~~~~~~~~~~nv~v~~~~pq~~lL~~~~v~~~ItHgG~~s~~eal~~GvP~l~~P~~~DQ~~na~rv~~ 394 (473)
...+|+++..+. +.|+++..|+||.++|.|+++++||||||+||++||+++|||||++|++.||+.||+|+++
T Consensus 306 ------~~~l~~~~~~~~-~~nv~~~~~~pq~~lL~hp~~~~fItHGG~~s~~eal~~GvP~v~~P~~~DQ~~na~rv~~ 378 (450)
T d2c1xa1 306 ------RVHLPEGFLEKT-RGYGMVVPWAPQAEVLAHEAVGAFVTHCGWNSLWESVAGGVPLICRPFFGDQRLNGRMVED 378 (450)
T ss_dssp ------GGGSCTTHHHHH-TTTEEEESCCCHHHHHTSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHH
T ss_pred ------cccCChhhhhhc-cccccccccCChHhhhccCceeEEEccCCccHHHHHHHcCCCEEecccccchHHHHHHHHH
Confidence 144666655444 4688889999999999999999999999999999999999999999999999999999986
Q ss_pred HhcceEEeccCCCCCCCHHHHHHHHHHHhCCcHHHH---HHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHhhc
Q 042753 395 QLGVGIRVGEGTRNIPESDELARLLAQSVDGPRRER---LKARELSGAALSAVVKGGSSDRDLNDFIKRINELK 465 (473)
Q Consensus 395 ~~G~G~~l~~~~~~~~~~~~l~~~i~~~l~~~~~~~---~~a~~~~~~~~~~~~~~gs~~~~~~~~~~~~~~~~ 465 (473)
++|+|+.++ ..++|+++|.++|+++|+|+ +|+ +||++|++..++++++||||.+++..++|++.|++
T Consensus 379 ~~G~G~~l~---~~~~t~~~l~~ai~~vL~d~-~y~~~~~r~~~l~~~~~~a~~~~gss~~~~~~~~e~v~r~~ 448 (450)
T d2c1xa1 379 VLEIGVRIE---GGVFTKSGLMSCFDQILSQE-KGKKLRENLRALRETADRAVGPKGSSTENFITLVDLVSKPK 448 (450)
T ss_dssp TSCCEEECG---GGSCCHHHHHHHHHHHHHSH-HHHHHHHHHHHHHHHHHHHTSTTCHHHHHHHHHHHHHTSCC
T ss_pred HcCcEEEec---CCCcCHHHHHHHHHHHhcCc-HHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHhhhc
Confidence 579999999 89999999999999999997 776 57777777888888899999999999999999875
|
| >d2vcha1 c.87.1.10 (A:6-476) Hydroquinone glucosyltransferase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDPGT-like domain: Hydroquinone glucosyltransferase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=100.00 E-value=7.4e-53 Score=424.17 Aligned_cols=445 Identities=28% Similarity=0.448 Sum_probs=311.8
Q ss_pred cEEEEEcCCCCCChHHHHHHHHHHHh-CCCeEEEEeCCCChhhhhh-hccCCCCCCeeEEEcCCCCCCCCCChhhHHH--
Q 042753 6 AHILVYPFPTSGHIIPLLDLTNRLLT-LGLNVTVLITQNNLPLLDS-LNANHPSTSLQSLVLPQPKWPAGSPATRLLK-- 81 (473)
Q Consensus 6 ~~Il~~~~~~~GH~~p~l~La~~L~~-rGh~Vt~~~~~~~~~~i~~-~~~~~~~~~~~f~~l~~~~~~~~~~~~~~~~-- 81 (473)
+||+++|+|++||++|+++||++|++ |||+|||++++.+...... .........+....++...............
T Consensus 2 ~hil~~p~p~~GH~~P~l~La~~L~~~rGH~Vt~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (471)
T d2vcha1 2 PHVAIIPSPGMGHLIPLVEFAKRLVHLHGLTVTFVIAGEGPPSKAQRTVLDSLPSSISSVFLPPVDLTDLSSSTRIESRI 81 (471)
T ss_dssp CEEEEECCSCHHHHHHHHHHHHHHHHHHCCEEEEEECCSSSCC-CHHHHHC-CCTTEEEEECCCCCCTTSCTTCCHHHHH
T ss_pred CEEEEECchhHhHHHHHHHHHHHHHHccCCEEEEEeCCCcchhhhhhcccccCCCCcceeecCcccccccccccchHHHH
Confidence 59999999999999999999999975 8999999998765443322 2211112245555555332222222222222
Q ss_pred --HHHHHHHHhhHHHHHHHhcCCCCCcEEEeCCCcchHHHHHHHhCCCcEEEecchHHHHHHHHhhhcc---CCCCCCCC
Q 042753 82 --FMRVLRELHYPALLDWFKSHPSPPVAILSDFFLGWTQGLAAELGLPRVVFSPSGAFALSVSFAMWTD---LPTNDDPD 156 (473)
Q Consensus 82 --~~~~~~~~~~~~l~~~l~~~~~~pD~VV~D~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~---~p~~~~~~ 156 (473)
+...+...+......+.++. ..+|+||.|....++..+++++|+|++.+++.+......+.+.+.. .+. ...
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~li~~~~~~~~~~~a~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~ 158 (471)
T d2vcha1 82 SLTVTRSNPELRKVFDSFVEGG-RLPTALVVDLFGTDAFDVAVEFHVPPYIFYPTTANVLSFFLHLPKLDETVSC--EFR 158 (471)
T ss_dssp HHHHHTTHHHHHHHHHHHHHTT-CCCSEEEECTTCGGGHHHHHHTTCCEEEEECSCHHHHHHHHHHHHHHHHCCS--CGG
T ss_pred HHHHHHHHHHHHHHHHHHHhcC-CCCcEEEEeccchHHHHHHHHhCCCcccccccchhhHHHhhcCcccccccCc--ccc
Confidence 22222223333334444433 2789999999999999999999999999998877655554333221 111 000
Q ss_pred CCCccccCCCCCCCCCCCccccchhhhccCCCCCchHHHHHHhhhccCCcEEeecchHHhhHHHHHHHHHhhC-CCcEEE
Q 042753 157 NVDALVSFPRVPNCPVYPWYQISHLYRTLKEGDPDWDLHRSNMMANKTSWGIVFNSFAELERVYIDHMKKEMG-HDRVWA 235 (473)
Q Consensus 157 ~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~le~~~~~~~~~~~~-~~~~~~ 235 (473)
....+..+++... ...... ..........................+...+.+...+...+........ .+.+..
T Consensus 159 ~~~~~~~~~~~~~---~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (471)
T d2vcha1 159 ELTEPLMLPGCVP---VAGKDF--LDPAQDRKDDAYKWLLHNTKRYKEAEGILVNTFFELEPNAIKALQEPGLDKPPVYP 233 (471)
T ss_dssp GCSSCBCCTTCCC---BCGGGS--CGGGSCTTSHHHHHHHHHHHHGGGCSEEEESCCTTTSHHHHHHHHSCCTTCCCEEE
T ss_pred ccccccccccccc---cccccc--cccccccchHHHHHHHHHHHhhcccccccchhHHHHHHHHHhhcccccCCCCCccC
Confidence 0011111222111 111111 1111112233445556666677777788888777777665555443221 145667
Q ss_pred eccCCCCCCcchhhccCCCCCCCChhhhHHHhcCCCCCcEEEEEeCCcccCCHHHHHHHHHHHHhCCCcEEEEEeCCCcc
Q 042753 236 VGPVLPPDDDLVESMCRGGSSSVPAHDVLTWLDSRRDESVVYVCFGSRYVLTAKQIHELAAALEKTDVDFVYCVREPDER 315 (473)
Q Consensus 236 vGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~V~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~ 315 (473)
.+++.... . ........+++.+|++.....+++|+++|+........+.++..+++..+.+++|........
T Consensus 234 ~~~~~~~~-~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (471)
T d2vcha1 234 VGPLVNIG-K-------QEAKQTEESECLKWLDNQPLGSVLYVSFGSGGTLTCEQLNELALGLADSEQRFLWVIRSPSGI 305 (471)
T ss_dssp CCCCCCCS-C-------SCC-----CHHHHHHHTSCTTCEEEEECTTTCCCCHHHHHHHHHHHHHTTCEEEEEECCCCSS
T ss_pred cccccccC-c-------cccccccchhHHHHHHhcCCccccccccccccCCCHHHHHHHHHHHHhhcCCeEEEecccccc
Confidence 77665443 1 001134567889999988889999999999999899999999999999999999998765311
Q ss_pred C---------CcccCCCCchhhHHhhcCCCeEeecCccHHHhhhccCccceeeccCchhHHHHHhhCCeEecCcccccch
Q 042753 316 H---------ASQDCGVLPDGFEDRVAGRGYVIRGWSQQVAILRHKAVGAFLTHCGWNSVLEGVSAGVVMLTWPMDADQY 386 (473)
Q Consensus 316 ~---------~~~~~~~lp~~~~~~~~~~nv~v~~~~pq~~lL~~~~v~~~ItHgG~~s~~eal~~GvP~l~~P~~~DQ~ 386 (473)
. .......+|+++.....++|+++.+|+||.+||+|+++++||||||+||++||+++|||||++|+++||+
T Consensus 306 ~~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~~~~w~Pq~~lL~hp~~~~fVtHGG~gS~~EAl~~GvP~v~~P~~~DQ~ 385 (471)
T d2vcha1 306 ANSSYFDSHSQTDPLTFLPPGFLERTKKRGFVIPFWAPQAQVLAHPSTGGFLTHCGWNSTLESVVSGIPLIAWPLYAEQK 385 (471)
T ss_dssp TTTTTTCC--CSCGGGGSCTTHHHHTTTTEEEEESCCCHHHHHHSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHH
T ss_pred ccccccccccccchhhhCCchhhhhccCCCeeecccCCHHHHhcCccCCEEEecCCccHHHHHHHcCCCEEEcccccccH
Confidence 0 0001234788888888889999999999999999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHhcceEEeccCCCCCCCHHHHHHHHHHHhCCc--HHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHhh
Q 042753 387 TNAQLLVDQLGVGIRVGEGTRNIPESDELARLLAQSVDGP--RRERLKARELSGAALSAVVKGGSSDRDLNDFIKRINEL 464 (473)
Q Consensus 387 ~na~rv~~~~G~G~~l~~~~~~~~~~~~l~~~i~~~l~~~--~~~~~~a~~~~~~~~~~~~~~gs~~~~~~~~~~~~~~~ 464 (473)
.||+|+++++|+|+.+..++...+|+++|+++|+++|+|+ ++||+||++|+++++.++++||||.++++.+++.+++.
T Consensus 386 ~nA~rv~e~lG~Gv~l~~~~~~~~t~~~l~~ai~~vl~~~~~~~~r~ra~~l~e~~~~a~~~gG~s~~~~~~~~~~~~~~ 465 (471)
T d2vcha1 386 MNAVLLSEDIRAALRPRAGDDGLVRREEVARVVKGLMEGEEGKGVRNKMKELKEAACRVLKDDGTSTKALSLVALKWKAH 465 (471)
T ss_dssp HHHHHHHHTTCCEECCCCCTTSCCCHHHHHHHHHHHHTSTHHHHHHHHHHHHHHHHHHHTSTTSHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHheeEEEEecCCCCcCCHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHh
Confidence 9999997688999999854345699999999999999996 25999999999999999999999999999999999987
Q ss_pred cc
Q 042753 465 KS 466 (473)
Q Consensus 465 ~~ 466 (473)
+.
T Consensus 466 ~~ 467 (471)
T d2vcha1 466 KK 467 (471)
T ss_dssp HH
T ss_pred hH
Confidence 64
|
| >d2acva1 c.87.1.10 (A:3-463) Triterpene UDP-glucosyl transferase UGT71G1 {Medicago truncatula [TaxId: 3880]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDPGT-like domain: Triterpene UDP-glucosyl transferase UGT71G1 species: Medicago truncatula [TaxId: 3880]
Probab=100.00 E-value=1.2e-52 Score=421.52 Aligned_cols=442 Identities=26% Similarity=0.386 Sum_probs=309.7
Q ss_pred ccEEEEEcCCCCCChHHHHHHHHHHHhCCCeEE--EEeCCCChhh-hhhhccC--CCCCCeeEEEcCCCCCCCCCChhhH
Q 042753 5 GAHILVYPFPTSGHIIPLLDLTNRLLTLGLNVT--VLITQNNLPL-LDSLNAN--HPSTSLQSLVLPQPKWPAGSPATRL 79 (473)
Q Consensus 5 ~~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt--~~~~~~~~~~-i~~~~~~--~~~~~~~f~~l~~~~~~~~~~~~~~ 79 (473)
++||+|+|+|++||++|+++||++|++|||+|| +++++..... +...+.. ...+.++|..++.............
T Consensus 7 ~~hil~~p~P~~GH~~P~l~lA~~L~~rGH~V~vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (461)
T d2acva1 7 NSELIFIPAPGIGHLASALEFAKLLTNHDKNLYITVFCIKFPGMPFADSYIKSVLASQPQIQLIDLPEVEPPPQELLKSP 86 (461)
T ss_dssp CEEEEEECCSSTTTHHHHHHHHHHHHHTCTTEEEEEEECCCTTCCCCHHHHHHHHCSCTTEEEEECCCCCCCCGGGGGSH
T ss_pred CCeEEEecChhhhHHHHHHHHHHHHHHCCCCeEEEEEeCCccchhhhhhcccccccCCCCeeEEECCCCCCchhhhhhcH
Confidence 679999999999999999999999999999876 4555443222 2222211 2235688887764321111111222
Q ss_pred HHHHHHHHHHhhHHHHHHHhcC-CCCCcEEEeCCCcchHHHHHHHhCCCcEEEecchHHHHHHHHhhhccCCCCCCCCCC
Q 042753 80 LKFMRVLRELHYPALLDWFKSH-PSPPVAILSDFFLGWTQGLAAELGLPRVVFSPSGAFALSVSFAMWTDLPTNDDPDNV 158 (473)
Q Consensus 80 ~~~~~~~~~~~~~~l~~~l~~~-~~~pD~VV~D~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~p~~~~~~~~ 158 (473)
..+...+.+...+.++++++.. ..++|+||+|.+..++..+|+++++|++.+++..+.......+....... ......
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~d~~~~~~~~~a~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 165 (461)
T d2acva1 87 EFYILTFLESLIPHVKATIKTILSNKVVGLVLDFFCVSMIDVGNEFGIPSYLFLTSNVGFLSLMLSLKNRQIE-EVFDDS 165 (461)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHCCTTEEEEEEEGGGGGGHHHHHHTTCCEEEEESSCHHHHHHHHHGGGSCTT-CCCCCS
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccCCCeEEEEeccchHHHHHHHHhCCCeEEEecccchhhHHhhcccccccc-cccccc
Confidence 2222222223344444444432 11789999999999999999999999999999887766655544432211 000000
Q ss_pred CccccCCCCCCCCCCCccccchhhhccCCCCCchHHHHHHhhhccCCcEEeecchHHhhHHHHHHHHHhhC-CCcEEEec
Q 042753 159 DALVSFPRVPNCPVYPWYQISHLYRTLKEGDPDWDLHRSNMMANKTSWGIVFNSFAELERVYIDHMKKEMG-HDRVWAVG 237 (473)
Q Consensus 159 ~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~le~~~~~~~~~~~~-~~~~~~vG 237 (473)
.......+++.........+..... .........+.+.........+...+++..++......+.+..+ .++++++|
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (461)
T d2acva1 166 DRDHQLLNIPGISNQVPSNVLPDAC--FNKDGGYIAYYKLAERFRDTKGIIVNTFSDLEQSSIDALYDHDEKIPPIYAVG 243 (461)
T ss_dssp SGGGCEECCTTCSSCEEGGGSCHHH--HCTTTHHHHHHHHHHHHTTSSEEEESCCHHHHHHHHHHHHHHCTTSCCEEECC
T ss_pred ccccccccccccccchhhhhhhhhh--hccchhHHHHHHHHHhhhccccccccccccccchhhhhhhhcccCCCCceeec
Confidence 0111111222111111111111111 11233445666777778888899999998888777666665322 15899999
Q ss_pred cCCCCCCcchhhccCCCCCCCChhhhHHHhcCCCCCcEEEEEeCCcc-cCCHHHHHHHHHHHHhCCCcEEEEEeCCCccC
Q 042753 238 PVLPPDDDLVESMCRGGSSSVPAHDVLTWLDSRRDESVVYVCFGSRY-VLTAKQIHELAAALEKTDVDFVYCVREPDERH 316 (473)
Q Consensus 238 pl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~V~vs~Gs~~-~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~ 316 (473)
|....... .........++++..|++......++++++|+.. ..+.+.+..++.+++..+++++|+.....
T Consensus 244 p~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 315 (461)
T d2acva1 244 PLLDLKGQ-----PNPKLDQAQHDLILKWLDEQPDKSVVFLCFGSMGVSFGPSQIREIALGLKHSGVRFLWSNSAEK--- 315 (461)
T ss_dssp CCCCSSCC-----CBTTBCHHHHHHHHHHHHTSCTTCEEEEECCSSCCCCCHHHHHHHHHHHHHHTCEEEEECCCCG---
T ss_pred cccccCCc-----cCCCccccCcHHHHHHHhhCCccceeeeeccccccCCCHHHHHHHHHHHHhcCccEEEEeeccc---
Confidence 98776511 0000112345677889988777888989988875 46788999999999999999999998764
Q ss_pred CcccCCCCchhhHHhh-cCCCeEeecCccHHHhhhccCccceeeccCchhHHHHHhhCCeEecCcccccchhhHHHHHHH
Q 042753 317 ASQDCGVLPDGFEDRV-AGRGYVIRGWSQQVAILRHKAVGAFLTHCGWNSVLEGVSAGVVMLTWPMDADQYTNAQLLVDQ 395 (473)
Q Consensus 317 ~~~~~~~lp~~~~~~~-~~~nv~v~~~~pq~~lL~~~~v~~~ItHgG~~s~~eal~~GvP~l~~P~~~DQ~~na~rv~~~ 395 (473)
...|+++.+.. .+.|+.+..|.||.++|.|+++++||||||+||++||+++|||||++|++.||+.||+|++++
T Consensus 316 -----~~~~~~~~~~~~~~~n~~v~~~~pq~~~l~~p~~~~fItHGG~gs~~eAl~~GVP~l~~P~~~DQ~~nA~rlve~ 390 (461)
T d2acva1 316 -----KVFPEGFLEWMELEGKGMICGWAPQVEVLAHKAIGGFVSHCGWNSILESMWFGVPILTWPIYAEQQLNAFRLVKE 390 (461)
T ss_dssp -----GGSCTTHHHHHHHHCSEEEESSCCHHHHHHSTTEEEEEECCCHHHHHHHHHTTCCEEECCCSTTHHHHHHHHHHT
T ss_pred -----ccCCccchhhhccCCCeEEEecCCHHHHHhcccCCEEEecCCccHHHHHHHcCCCEEeCCcccchHHHHHHHHHH
Confidence 33455554433 467888999999999999999999999999999999999999999999999999999998657
Q ss_pred hcceEEeccCC---CCCCCHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHH
Q 042753 396 LGVGIRVGEGT---RNIPESDELARLLAQSVDGPRRERLKARELSGAALSAVVKGGSSDRDLNDFIKRIN 462 (473)
Q Consensus 396 ~G~G~~l~~~~---~~~~~~~~l~~~i~~~l~~~~~~~~~a~~~~~~~~~~~~~~gs~~~~~~~~~~~~~ 462 (473)
+|+|+.++.+. ...+|+++|+++|+++|+|++.||+||++|++++++++++||||..++++++++++
T Consensus 391 ~G~G~~l~~~~~~~~~~~t~~~l~~a~~~vl~~d~~~r~~a~~l~~~~r~a~~~gg~s~~~~~~~~~~~~ 460 (461)
T d2acva1 391 WGVGLGLRVDYRKGSDVVAAEEIEKGLKDLMDKDSIVHKKVQEMKEMSRNAVVDGGSSLISVGKLIDDIT 460 (461)
T ss_dssp SCCEEESCSSCCTTCCCCCHHHHHHHHHHHTCTTCTHHHHHHHHHHHHHHHTSTTSHHHHHHHHHHHHHH
T ss_pred hCceEEeeccccccCCccCHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHhc
Confidence 79999997321 22389999999999999764369999999999999999999999999999999986
|
| >d2pq6a1 c.87.1.10 (A:8-480) (Iso)flavonoid glycosyltransferase {Medicago truncatula [TaxId: 3880]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDPGT-like domain: (Iso)flavonoid glycosyltransferase species: Medicago truncatula [TaxId: 3880]
Probab=100.00 E-value=2.9e-53 Score=427.21 Aligned_cols=445 Identities=26% Similarity=0.403 Sum_probs=308.6
Q ss_pred cEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCCCChhhhhhhccC---CCCCCeeEEEcCCCCCCCCC---ChhhH
Q 042753 6 AHILVYPFPTSGHIIPLLDLTNRLLTLGLNVTVLITQNNLPLLDSLNAN---HPSTSLQSLVLPQPKWPAGS---PATRL 79 (473)
Q Consensus 6 ~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~i~~~~~~---~~~~~~~f~~l~~~~~~~~~---~~~~~ 79 (473)
+||+++|+|++||++|+++||++|++|||+|||++++.+...+.+.... .....+++..++........ .....
T Consensus 2 ~hvl~~p~p~~gH~~P~~~lA~~L~~rGH~Vt~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (473)
T d2pq6a1 2 PHVVMIPYPVQGHINPLFKLAKLLHLRGFHITFVNTEYNHKRLLKSRGPKAFDGFTDFNFESIPDGLTPMEGDGDVSQDV 81 (473)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEEEHHHHHHHC------------CEEEEEECCCCC---------CCH
T ss_pred CEEEEECchhhhHHHHHHHHHHHHHHCCCeEEEEeCcchHhHHhhccCcccccCCCCcceeecCCCCcccccccchhhhH
Confidence 5899999999999999999999999999999999998777776665322 11234666665532111111 11122
Q ss_pred HHHHHHHHH-------HhhHHHHHHHhcCCCCCcEEEeCCCcchHHHHHHHhCCCcEEEecchHHHHHHHHhhhcc----
Q 042753 80 LKFMRVLRE-------LHYPALLDWFKSHPSPPVAILSDFFLGWTQGLAAELGLPRVVFSPSGAFALSVSFAMWTD---- 148 (473)
Q Consensus 80 ~~~~~~~~~-------~~~~~l~~~l~~~~~~pD~VV~D~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~---- 148 (473)
..+...+.. .....+....++. .+|+||.|....++..+|+++++|++.+++..........+....
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~d~vi~~~~~~~~~~~a~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (473)
T d2pq6a1 82 PTLCQSVRKNFLKPYCELLTRLNHSTNVP--PVTCLVSDCCMSFTIQAAEEFELPNVLYFSSSACSLLNVMHFRSFVERG 159 (473)
T ss_dssp HHHHHHHTTSSHHHHHHHHHHHHTCSSSC--CCCEEEEETTCTHHHHHHHHTTCCEEEEECSCHHHHHHHTTHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccCC--CCeEEEecCcchhhHHHHHHhCCCceeeccccchhhhhhhccccccccc
Confidence 222222211 1122222333334 789999999999999999999999999998887755554333221
Q ss_pred -CCCCC--CCCCCCccccCCCCCCCCCCCccccchhhhccCCCCCchHHHHHHhhhccCCcEEeecchHHhhHHHHHHHH
Q 042753 149 -LPTND--DPDNVDALVSFPRVPNCPVYPWYQISHLYRTLKEGDPDWDLHRSNMMANKTSWGIVFNSFAELERVYIDHMK 225 (473)
Q Consensus 149 -~p~~~--~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~le~~~~~~~~ 225 (473)
.+... .............++.......+.+..+.............+........+..+...+++.+.+......+.
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (473)
T d2pq6a1 160 IIPFKDESYLTNGCLETKVDWIPGLKNFRLKDIVDFIRTTNPNDIMLEFFIEVADRVNKDTTILLNTFNELESDVINALS 239 (473)
T ss_dssp CSSCSSGGGGTSSGGGCBCCSSTTCCSCBGGGSCGGGCCSCTTCHHHHHHHHHHHTCCTTCCEEESSCGGGGHHHHHHHH
T ss_pred CCCccccccccccccccccccCCCccccchhhhhhhhhhcchhHHHHHHHHHHHHHHHhhhcccccchhhhhHhHHHHHH
Confidence 11100 000000111112222222244444444444444445566677778888888999999999998887777666
Q ss_pred HhhCCCcEEEeccCCCCCC--c-chhhccCCCCCCCChhhhHHHhcCCCCCcEEEEEeCCcccCCHHHHHHHHHHHHhCC
Q 042753 226 KEMGHDRVWAVGPVLPPDD--D-LVESMCRGGSSSVPAHDVLTWLDSRRDESVVYVCFGSRYVLTAKQIHELAAALEKTD 302 (473)
Q Consensus 226 ~~~~~~~~~~vGpl~~~~~--~-~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~V~vs~Gs~~~~~~~~~~~~~~al~~~~ 302 (473)
... +...+.++...... + .......+.......++...|+.....+.++|+++||......+..++++.++++.+
T Consensus 240 ~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~gs~~~~~~~~~~~~~~~~~~~~ 317 (473)
T d2pq6a1 240 STI--PSIYPIGPLPSLLKQTPQIHQLDSLDSNLWKEDTECLDWLESKEPGSVVYVNFGSTTVMTPEQLLEFAWGLANCK 317 (473)
T ss_dssp TTC--TTEEECCCHHHHHHTSTTGGGGCC---------CHHHHHHTTSCTTCEEEEECCSSSCCCHHHHHHHHHHHHHTT
T ss_pred hcC--CcccccCCccccCCCCCCccccccCCcccccccHHHHHHhhhcCCCceeeeccCccccccHHHHHHHHHHHHhcC
Confidence 544 46666665432210 0 000000111113344567778888788889999999999999999999999999999
Q ss_pred CcEEEEEeCCCccCCcccCCCCchhhHHhhcCCCeEeecCccHHHhhhccCccceeeccCchhHHHHHhhCCeEecCccc
Q 042753 303 VDFVYCVREPDERHASQDCGVLPDGFEDRVAGRGYVIRGWSQQVAILRHKAVGAFLTHCGWNSVLEGVSAGVVMLTWPMD 382 (473)
Q Consensus 303 ~~~i~~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~v~~~~pq~~lL~~~~v~~~ItHgG~~s~~eal~~GvP~l~~P~~ 382 (473)
.+++|+++.... ......+|+++.... +.|+++.+|+||.+||.|+++++||||||+||++||+++|||||++|++
T Consensus 318 ~~~i~~~~~~~~---~~~~~~~~~~~~~~~-~~Nv~~~~~~Pq~~lL~hp~~~~fItHGG~~s~~Eal~~GVP~lv~P~~ 393 (473)
T d2pq6a1 318 KSFLWIIRPDLV---IGGSVIFSSEFTNEI-ADRGLIASWCPQDKVLNHPSIGGFLTHCGWNSTTESICAGVPMLCWPFF 393 (473)
T ss_dssp CEEEEECCGGGS---TTTGGGSCHHHHHHH-TTTEEEESCCCHHHHHTSTTEEEEEECCCHHHHHHHHHHTCCEEECCCS
T ss_pred CeEEEEEccCCc---ccccccCcccchhhc-cCceEEeeeCCHHHHhcCCcCcEEEecCCccHHHHHHHcCCCEEeccch
Confidence 999999976531 111133555444332 4799999999999999999999999999999999999999999999999
Q ss_pred ccchhhHHHHHHHhcceEEeccCCCCCCCHHHHHHHHHHHhCCc--HHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHH
Q 042753 383 ADQYTNAQLLVDQLGVGIRVGEGTRNIPESDELARLLAQSVDGP--RRERLKARELSGAALSAVVKGGSSDRDLNDFIKR 460 (473)
Q Consensus 383 ~DQ~~na~rv~~~~G~G~~l~~~~~~~~~~~~l~~~i~~~l~~~--~~~~~~a~~~~~~~~~~~~~~gs~~~~~~~~~~~ 460 (473)
.||+.||+|+++++|+|+.++ . ++|+++|+++|+++|+|+ ++||+||++|++++++++++||||+++++++||+
T Consensus 394 ~DQ~~na~rv~~~~G~G~~l~---~-~~t~~~l~~ai~~vl~d~~~~~~r~~a~~l~~~~~~a~~~gg~s~~~~~~~i~~ 469 (473)
T d2pq6a1 394 ADQPTDCRFICNEWEIGMEID---T-NVKREELAKLINEVIAGDKGKKMKQKAMELKKKAEENTRPGGCSYMNLNKVIKD 469 (473)
T ss_dssp TTHHHHHHHHHHTSCCEEECC---S-SCCHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHTSTTCHHHHHHHHHHHH
T ss_pred hhhHHHHHHHHHHcCeEEeeC---C-CcCHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Confidence 999999999975679999998 4 699999999999999997 2499999999999999999999999999999998
Q ss_pred HH
Q 042753 461 IN 462 (473)
Q Consensus 461 ~~ 462 (473)
+.
T Consensus 470 ~~ 471 (473)
T d2pq6a1 470 VL 471 (473)
T ss_dssp TT
T ss_pred Hh
Confidence 64
|
| >d1rrva_ c.87.1.5 (A:) TDP-vancosaminyltransferase GftD {Amycolatopsis orientalis [TaxId: 31958]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Gtf glycosyltransferase domain: TDP-vancosaminyltransferase GftD species: Amycolatopsis orientalis [TaxId: 31958]
Probab=100.00 E-value=3.2e-45 Score=360.50 Aligned_cols=382 Identities=16% Similarity=0.147 Sum_probs=260.0
Q ss_pred cEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCCCChhhhhhhccCCCCCCeeEEEcCCCCCC----CCCCh--hhH
Q 042753 6 AHILVYPFPTSGHIIPLLDLTNRLLTLGLNVTVLITQNNLPLLDSLNANHPSTSLQSLVLPQPKWP----AGSPA--TRL 79 (473)
Q Consensus 6 ~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~i~~~~~~~~~~~~~f~~l~~~~~~----~~~~~--~~~ 79 (473)
|||+|+++|+.||++|+++||++|++|||+|||++++.+.+.+++. +++|..++.+... ..... ...
T Consensus 1 mrIl~~~~gt~Ghv~P~l~lA~~L~~rGh~V~~~t~~~~~~~v~~~-------g~~~~~~~~~~~~~~~~~~~~~~~~~~ 73 (401)
T d1rrva_ 1 MRVLLSVCGTRGDVEIGVALADRLKALGVQTRMCAPPAAEERLAEV-------GVPHVPVGLPQHMMLQEGMPPPPPEEE 73 (401)
T ss_dssp CEEEEEEESCHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHH-------TCCEEECSCCGGGCCCTTSCCCCHHHH
T ss_pred CeEEEECCCChhHHHHHHHHHHHHHHCCCEEEEEEChhhHHHHHHC-------CCeEEEcCCcHHhhhccccccccHHHH
Confidence 7999999999999999999999999999999999999998888877 6888887654211 11111 222
Q ss_pred HHHHHHHHHHhhHHHHHHHhcCCCCCcEEEeCCCcc-hHHHHHHHhCCCcEEEecchHHHHHHHHhhhccCCCCCCCCCC
Q 042753 80 LKFMRVLRELHYPALLDWFKSHPSPPVAILSDFFLG-WTQGLAAELGLPRVVFSPSGAFALSVSFAMWTDLPTNDDPDNV 158 (473)
Q Consensus 80 ~~~~~~~~~~~~~~l~~~l~~~~~~pD~VV~D~~~~-~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~p~~~~~~~~ 158 (473)
..+.....+...+.+.+.++.. ++|+++.|.... ++..+|+.+|+|++...+.+.... .
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~i~~~~~~~~~~~~a~~~~~p~~~~~~~~~~~~---------~--------- 133 (401)
T d1rrva_ 74 QRLAAMTVEMQFDAVPGAAEGC--AAVVAVGDLAAATGVRSVAEKLGLPFFYSVPSPVYLA---------S--------- 133 (401)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTC--SEEEEEECHHHHHHHHHHHHHHTCCEEEEESSGGGSC---------C---------
T ss_pred HHHHHHHHHHHHHHHHHHHhcC--CCeEEEEcCchhhHHHHHHHHhCCCcccccccchhhc---------c---------
Confidence 3333333335566777788888 999999987655 677899999999998876654310 0
Q ss_pred CccccCCCCCCCCCCCccccchhhhccCCCCCchHHHHHHhhhccCCcEE-eecchHHhh---------HHHHHHHHHhh
Q 042753 159 DALVSFPRVPNCPVYPWYQISHLYRTLKEGDPDWDLHRSNMMANKTSWGI-VFNSFAELE---------RVYIDHMKKEM 228 (473)
Q Consensus 159 ~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~s~~~le---------~~~~~~~~~~~ 228 (473)
+...+.+.................. ...................+. ......... .+.. ... ..
T Consensus 134 --~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~ 207 (401)
T d1rrva_ 134 --PHLPPAYDEPTTPGVTDIRVLWEER--AARFADRYGPTLNRRRAEIGLPPVEDVFGYGHGERPLLAADPVL-APL-QP 207 (401)
T ss_dssp --SSSCCCBCSCCCTTCCCHHHHHHHH--HHHHHHHHHHHHHHHHHHTTCCCCSCHHHHTTCSSCEECSCTTT-SCC-CS
T ss_pred --cccccccccccccccchhhhhHHHH--HHHHHhhhHHHHHHHHHHhCCcccchhhhhccccchhhcchhhh-ccc-CC
Confidence 0000010000000000000000000 000111111111111111110 001111000 0000 000 11
Q ss_pred CCCcEEEeccCCCCCCcchhhccCCCCCCCChhhhHHHhcCCCCCcEEEEEeCCcccCC-HHHHHHHHHHHHhCCCcEEE
Q 042753 229 GHDRVWAVGPVLPPDDDLVESMCRGGSSSVPAHDVLTWLDSRRDESVVYVCFGSRYVLT-AKQIHELAAALEKTDVDFVY 307 (473)
Q Consensus 229 ~~~~~~~vGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~V~vs~Gs~~~~~-~~~~~~~~~al~~~~~~~i~ 307 (473)
. +++..+|++.... . .+.++++..|++. ++++||+++||..... ....+.++.+++..+..++|
T Consensus 208 ~-~~~~~~g~~~~~~-~-----------~~~~~~~~~~l~~--~~~~v~~~~gs~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (401)
T d1rrva_ 208 D-VDAVQTGAWLLSD-E-----------RPLPPELEAFLAA--GSPPVHIGFGSSSGRGIADAAKVAVEAIRAQGRRVIL 272 (401)
T ss_dssp S-CCCEECCCCCCCC-C-----------CCCCHHHHHHHHS--SSCCEEECCTTCCSHHHHHHHHHHHHHHHHTTCCEEE
T ss_pred C-CCeEEECCCcccc-c-----------ccCCHHHHHhhcc--CCCeEEEECCccccCCHHHHHHHHHHHHhhcCCeEEE
Confidence 1 4678888887765 4 5577889999988 5779999999997644 45667788999999999998
Q ss_pred EEeCCCccCCcccCCCCchhhHHhhcCCCeEeecCccHHHhhhccCccceeeccCchhHHHHHhhCCeEecCcccccchh
Q 042753 308 CVREPDERHASQDCGVLPDGFEDRVAGRGYVIRGWSQQVAILRHKAVGAFLTHCGWNSVLEGVSAGVVMLTWPMDADQYT 387 (473)
Q Consensus 308 ~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~v~~~~pq~~lL~~~~v~~~ItHgG~~s~~eal~~GvP~l~~P~~~DQ~~ 387 (473)
...... .....+ ++|+++.+|+||.++|+|+++ ||||||+||+.||+++|||+|++|++.||+.
T Consensus 273 ~~~~~~-----~~~~~~---------~~~v~~~~~~p~~~ll~~~~~--~I~hgG~~t~~Eal~~GvP~l~~P~~~DQ~~ 336 (401)
T d1rrva_ 273 SRGWTE-----LVLPDD---------RDDCFAIDEVNFQALFRRVAA--VIHHGSAGTEHVATRAGVPQLVIPRNTDQPY 336 (401)
T ss_dssp ECTTTT-----CCCSCC---------CTTEEEESSCCHHHHGGGSSE--EEECCCHHHHHHHHHHTCCEEECCCSBTHHH
T ss_pred eccccc-----cccccC---------CCCEEEEeccCcHHHhhhccE--EEecCCchHHHHHHHhCCCEEEecccccHHH
Confidence 887653 111222 479999999999999999776 9999999999999999999999999999999
Q ss_pred hHHHHHHHhcceEEeccCCCCCCCHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHH
Q 042753 388 NAQLLVDQLGVGIRVGEGTRNIPESDELARLLAQSVDGPRRERLKARELSGAALSAVVKGGSSDRDLNDFIKRIN 462 (473)
Q Consensus 388 na~rv~~~~G~G~~l~~~~~~~~~~~~l~~~i~~~l~~~~~~~~~a~~~~~~~~~~~~~~gs~~~~~~~~~~~~~ 462 (473)
||++++ ++|+|+.++ ..++|+++|.++|+++|+ + +|+++|+++++.++ .+|..++++.+++.+.
T Consensus 337 na~~v~-~~G~g~~l~---~~~~~~~~L~~ai~~vl~-~-~~r~~a~~~~~~~~-----~~g~~~aa~~ie~~~~ 400 (401)
T d1rrva_ 337 FAGRVA-ALGIGVAHD---GPTPTFESLSAALTTVLA-P-ETRARAEAVAGMVL-----TDGAAAAADLVLAAVG 400 (401)
T ss_dssp HHHHHH-HHTSEEECS---SSCCCHHHHHHHHHHHTS-H-HHHHHHHHHTTTCC-----CCHHHHHHHHHHHHHH
T ss_pred HHHHHH-HCCCEEEcC---cCCCCHHHHHHHHHHHhC-H-HHHHHHHHHHHHHh-----hcCHHHHHHHHHHHhC
Confidence 999999 559999999 788999999999999995 4 79999999998874 2456778888777654
|
| >d1iira_ c.87.1.5 (A:) UDP-glucosyltransferase GtfB {Amycolatopsis orientalis [TaxId: 31958]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Gtf glycosyltransferase domain: UDP-glucosyltransferase GtfB species: Amycolatopsis orientalis [TaxId: 31958]
Probab=100.00 E-value=8.7e-43 Score=342.46 Aligned_cols=380 Identities=16% Similarity=0.167 Sum_probs=242.7
Q ss_pred cEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCCCChhhhhhhccCCCCCCeeEEEcCCCCCCCCC--ChhhHHHHH
Q 042753 6 AHILVYPFPTSGHIIPLLDLTNRLLTLGLNVTVLITQNNLPLLDSLNANHPSTSLQSLVLPQPKWPAGS--PATRLLKFM 83 (473)
Q Consensus 6 ~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~i~~~~~~~~~~~~~f~~l~~~~~~~~~--~~~~~~~~~ 83 (473)
||||++++|++||++|+++||++|++|||+|||++++.+.+.+.+. |++|..++........ .......+.
T Consensus 1 mkil~~~~gt~Gh~~P~lala~~L~~~Gh~V~~~~~~~~~~~v~~~-------g~~~~~i~~~~~~~~~~~~~~~~~~~~ 73 (401)
T d1iira_ 1 MRVLLATCGSRGDTEPLVALAVRVRDLGADVRMCAPPDCAERLAEV-------GVPHVPVGPSARAPIQRAKPLTAEDVR 73 (401)
T ss_dssp CEEEEECCSCHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHT-------TCCEEECCC-------CCSCCCHHHHH
T ss_pred CEEEEECCCChhHHHHHHHHHHHHHHCCCEEEEEeCcchHHHHHHc-------CCeEEECCcchhhhhhccccchHHHHH
Confidence 6899999999999999999999999999999999999988888876 7889888743222211 111112222
Q ss_pred HHHHHHhhHHHHHHHhcCCCCCcEEEeCCCcc---hHHHHHHHhCCCcEEEecchHHHHHHHHhhhccCCCCCCCCCCCc
Q 042753 84 RVLRELHYPALLDWFKSHPSPPVAILSDFFLG---WTQGLAAELGLPRVVFSPSGAFALSVSFAMWTDLPTNDDPDNVDA 160 (473)
Q Consensus 84 ~~~~~~~~~~l~~~l~~~~~~pD~VV~D~~~~---~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~ 160 (473)
..........++.+.+... ..|.++.+.... ++..++..+++|++...+...... . .
T Consensus 74 ~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~-----------~-----~--- 133 (401)
T d1iira_ 74 RFTTEAIATQFDEIPAAAE-GCAAVVTTGLLAAAIGVRSVAEKLGIPYFYAFHCPSYVP-----------S-----P--- 133 (401)
T ss_dssp HHHHHHHHHHHHHHHHHTT-TCSEEEEESCHHHHHHHHHHHHHHTCCEEEEESSGGGSC-----------C-----S---
T ss_pred HHHHHHHHHHHHHHHHHhh-cCcceEEeecchhHHHHHHHHHHhccccccccccccccc-----------c-----c---
Confidence 2222122222222222221 456666665543 455889999999998877654310 0 0
Q ss_pred cccCCCCCCCCCCCccccchhhhccCCCCCchHHHHHHhhhccCCc---------------EEeecchHHhhHHHHHHHH
Q 042753 161 LVSFPRVPNCPVYPWYQISHLYRTLKEGDPDWDLHRSNMMANKTSW---------------GIVFNSFAELERVYIDHMK 225 (473)
Q Consensus 161 ~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~s~~~le~~~~~~~~ 225 (473)
....+.+..............+... .......+........+.. ...+++.+.+++ ..
T Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~ 206 (401)
T d1iira_ 134 YYPPPPLGEPSTQDTIDIPAQWERN--NQSAYQRYGGLLNSHRDAIGLPPVEDIFTFGYTDHPWVAADPVLAP-----LQ 206 (401)
T ss_dssp SSCCCC---------CHHHHHHHHH--HHHHHHHHHHHHHHHHHHTTCCCCCCHHHHHHCSSCEECSCTTTSC-----CC
T ss_pred cccccccccccccchhcchhhhhhh--hhHHHHHHHHHHHHHHHHhcCccchhhhhhcccchhhhcccccccC-----CC
Confidence 0001111100000000000000000 0000111111111111111 111122221211 11
Q ss_pred HhhCCCcEEEeccCCCCCCcchhhccCCCCCCCChhhhHHHhcCCCCCcEEEEEeCCcccCCHHHHHHHHHHHHhCCCcE
Q 042753 226 KEMGHDRVWAVGPVLPPDDDLVESMCRGGSSSVPAHDVLTWLDSRRDESVVYVCFGSRYVLTAKQIHELAAALEKTDVDF 305 (473)
Q Consensus 226 ~~~~~~~~~~vGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~V~vs~Gs~~~~~~~~~~~~~~al~~~~~~~ 305 (473)
+ .. +....+|++.... . ...+..+..|++. .+++||+++|+.. .....++.++++++..+..+
T Consensus 207 ~-~~-~~~~~~~~~~~~~-~-----------~~~~~~~~~~~~~--~~~~i~~~~~~~~-~~~~~~~~~~~al~~~~~~~ 269 (401)
T d1iira_ 207 P-TD-LDAVQTGAWILPD-E-----------RPLSPELAAFLDA--GPPPVYLGFGSLG-APADAVRVAIDAIRAHGRRV 269 (401)
T ss_dssp C-CS-SCCEECCCCCCCC-C-----------CCCCHHHHHHHHT--SSCCEEEECC----CCHHHHHHHHHHHHHTTCCE
T ss_pred C-cc-cccccccCcccCc-c-----------cccCHHHHHhhcc--CCCeEEEccCccc-cchHHHHHHHHHHHHcCCeE
Confidence 1 11 3555666554444 2 4456777788876 6789999999985 46788899999999999999
Q ss_pred EEEEeCCCccCCcccCCCCchhhHHhhcCCCeEeecCccHHHhhhccCccceeeccCchhHHHHHhhCCeEecCcccccc
Q 042753 306 VYCVREPDERHASQDCGVLPDGFEDRVAGRGYVIRGWSQQVAILRHKAVGAFLTHCGWNSVLEGVSAGVVMLTWPMDADQ 385 (473)
Q Consensus 306 i~~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~v~~~~pq~~lL~~~~v~~~ItHgG~~s~~eal~~GvP~l~~P~~~DQ 385 (473)
+|..+... .....+ ++|+++.+|+||.++|+|+++ ||||||+||++||+++|||||++|++.||
T Consensus 270 ~~~~~~~~-----~~~~~~---------~~nv~~~~~~p~~~~l~~~~~--~V~hgG~~t~~Eal~~GvP~v~~P~~~DQ 333 (401)
T d1iira_ 270 ILSRGWAD-----LVLPDD---------GADCFAIGEVNHQVLFGRVAA--VIHHGGAGTTHVAARAGAPQILLPQMADQ 333 (401)
T ss_dssp EECTTCTT-----CCCSSC---------GGGEEECSSCCHHHHGGGSSE--EEECCCHHHHHHHHHHTCCEEECCCSTTH
T ss_pred EEeccCCc-----cccccC---------CCCEEEEeccCHHHHHhhcCE--EEecCCchHHHHHHHhCCCEEEccccccH
Confidence 99987653 111222 368999999999999999886 99999999999999999999999999999
Q ss_pred hhhHHHHHHHhcceEEeccCCCCCCCHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHh
Q 042753 386 YTNAQLLVDQLGVGIRVGEGTRNIPESDELARLLAQSVDGPRRERLKARELSGAALSAVVKGGSSDRDLNDFIKRINE 463 (473)
Q Consensus 386 ~~na~rv~~~~G~G~~l~~~~~~~~~~~~l~~~i~~~l~~~~~~~~~a~~~~~~~~~~~~~~gs~~~~~~~~~~~~~~ 463 (473)
+.||++++ ++|+|+.++ ..++|+++|+++|+++|+ + +|+++|+++++.++ . .+..++++.+++.+.+
T Consensus 334 ~~na~~l~-~~G~g~~l~---~~~~~~~~l~~ai~~~l~-~-~~~~~a~~~~~~~~---~--~~~~~aa~~i~~~i~r 400 (401)
T d1iira_ 334 PYYAGRVA-ELGVGVAHD---GPIPTFDSLSAALATALT-P-ETHARATAVAGTIR---T--DGAAVAARLLLDAVSR 400 (401)
T ss_dssp HHHHHHHH-HHTSEEECS---SSSCCHHHHHHHHHHHTS-H-HHHHHHHHHHHHSC---S--CHHHHHHHHHHHHHHT
T ss_pred HHHHHHHH-HCCCEEEcC---cCCCCHHHHHHHHHHHhC-H-HHHHHHHHHHHHHH---h--cChHHHHHHHHHHHhc
Confidence 99999999 559999999 889999999999999995 4 79999999999985 2 2345678888888765
|
| >d1pn3a_ c.87.1.5 (A:) TDP-epi-vancosaminyltransferase GtfA {Amycolatopsis orientalis [TaxId: 31958]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Gtf glycosyltransferase domain: TDP-epi-vancosaminyltransferase GtfA species: Amycolatopsis orientalis [TaxId: 31958]
Probab=100.00 E-value=2e-42 Score=339.15 Aligned_cols=366 Identities=16% Similarity=0.148 Sum_probs=251.0
Q ss_pred cEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCCCChhhhhhhccCCCCCCeeEEEcCCCCCCCCC-----ChhhHH
Q 042753 6 AHILVYPFPTSGHIIPLLDLTNRLLTLGLNVTVLITQNNLPLLDSLNANHPSTSLQSLVLPQPKWPAGS-----PATRLL 80 (473)
Q Consensus 6 ~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~i~~~~~~~~~~~~~f~~l~~~~~~~~~-----~~~~~~ 80 (473)
|||||.++|+.||++|+++||++|++|||+|||++++.+.+.+++. ++.|..++........ ......
T Consensus 1 mril~~~~gt~Ghi~P~laLA~~L~~rGh~V~~~~~~~~~~~v~~~-------g~~~~~~~~~~~~~~~~~~~~~~~~~~ 73 (391)
T d1pn3a_ 1 MRVLITGCGSRGDTEPLVALAARLRELGADARMCLPPDYVERCAEV-------GVPMVPVGRAVRAGAREPGELPPGAAE 73 (391)
T ss_dssp CEEEEEEESSHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHH-------TCCEEECSSCSSGGGSCTTCCCTTCGG
T ss_pred CEEEEEcCCChhHHHHHHHHHHHHHHCCCEEEEEEChhhHhHHHHC-------CCeEEECCccHHHHhhChhhhhHHHHH
Confidence 7999999999999999999999999999999999999998888877 7888887744211111 111111
Q ss_pred HHHHHHHHHhhHHHHHHHhcCCCCCcEEEeCCCcc---hHHHHHHHhCCCcEEEecchHHHHHHHHhhhccCCCCCCCCC
Q 042753 81 KFMRVLRELHYPALLDWFKSHPSPPVAILSDFFLG---WTQGLAAELGLPRVVFSPSGAFALSVSFAMWTDLPTNDDPDN 157 (473)
Q Consensus 81 ~~~~~~~~~~~~~l~~~l~~~~~~pD~VV~D~~~~---~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 157 (473)
.+...+. ...+.+.+.++ .||+||+|.+.. .+..+|+++++|++.+.+.+....
T Consensus 74 ~~~~~~~-~~~~~l~~~~~----~~D~vi~~~~~~~~~~~~~~a~~~~i~~~~~~~~~~~~~------------------ 130 (391)
T d1pn3a_ 74 VVTEVVA-EWFDKVPAAIE----GCDAVVTTGLLPAAVAVRSMAEKLGIPYRYTVLSPDHLP------------------ 130 (391)
T ss_dssp GHHHHHH-HHHHHHHHHHT----TCSEEEEEECHHHHHHHHHHHHHHTCCEEEEESSGGGSG------------------
T ss_pred HHHHHHH-HHHHHHHHHhc----CCCeEEEcccCchHHHHHHHHHHcCCceEEeeccccccc------------------
Confidence 1122222 22233444442 689999998755 346789999999999876654210
Q ss_pred CCccccCCCCCCCCCCCccccchhhhccCCCCCchHHHHHHhhhccCC-----------cEEeecchHHhhHHHHHHHHH
Q 042753 158 VDALVSFPRVPNCPVYPWYQISHLYRTLKEGDPDWDLHRSNMMANKTS-----------WGIVFNSFAELERVYIDHMKK 226 (473)
Q Consensus 158 ~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~s~~~le~~~~~~~~~ 226 (473)
..... ........+... .....+.+........ ....+.....+.. ..
T Consensus 131 --------~~~~~--~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~------~~ 189 (391)
T d1pn3a_ 131 --------SEQSQ--AERDMYNQGADR-----LFGDAVNSHRASIGLPPVEHLYDYGYTDQPWLAADPVLSP------LR 189 (391)
T ss_dssp --------GGSCH--HHHHHHHHHHHH-----HTHHHHHHHHHTTSCCCCCCHHHHHHCSSCEECSCTTTSC------CC
T ss_pred --------ccccc--chhhHHHHHHHH-----HHHHHHHHHHHHhcCcccccccccccccceeeccchhhhc------cC
Confidence 00000 000000000000 0000011110000000 0001111111110 01
Q ss_pred hhCCCcEEEeccCCCCCCcchhhccCCCCCCCChhhhHHHhcCCCCCcEEEEEeCCcccCC-HHHHHHHHHHHHhCCCcE
Q 042753 227 EMGHDRVWAVGPVLPPDDDLVESMCRGGSSSVPAHDVLTWLDSRRDESVVYVCFGSRYVLT-AKQIHELAAALEKTDVDF 305 (473)
Q Consensus 227 ~~~~~~~~~vGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~V~vs~Gs~~~~~-~~~~~~~~~al~~~~~~~ 305 (473)
... ++.+++|++.... . ...++++..|... ++++||+++|+..... .+....++.++...+.++
T Consensus 190 ~~~-~~~~~~g~~~~~~-~-----------~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 254 (391)
T d1pn3a_ 190 PTD-LGTVQTGAWILPD-E-----------RPLSAELEAFLAA--GSTPVYVGFGSSSRPATADAAKMAIKAVRASGRRI 254 (391)
T ss_dssp TTC-CSCCBCCCCCCCC-C-----------CCCCHHHHHHTTS--SSCCEEEECTTCCSTHHHHHHHHHHHHHHHTTCCE
T ss_pred CCC-CCeeeecCcccCc-c-----------ccCCHHHhhhhcc--CCCeEEEeccccccccHHHHHHHHHHHHHhcCCEE
Confidence 122 4678888877665 3 4566788888876 6778999999997654 456677889999999999
Q ss_pred EEEEeCCCccCCcccCCCCchhhHHhhcCCCeEeecCccHHHhhhccCccceeeccCchhHHHHHhhCCeEecCccccc-
Q 042753 306 VYCVREPDERHASQDCGVLPDGFEDRVAGRGYVIRGWSQQVAILRHKAVGAFLTHCGWNSVLEGVSAGVVMLTWPMDAD- 384 (473)
Q Consensus 306 i~~~~~~~~~~~~~~~~~lp~~~~~~~~~~nv~v~~~~pq~~lL~~~~v~~~ItHgG~~s~~eal~~GvP~l~~P~~~D- 384 (473)
+|...... ..... .++|+++.+|+||.++|+|+++ ||||||+||++||+++|||+|++|+++|
T Consensus 255 ~~~~~~~~--------~~~~~------~~~~v~i~~~~p~~~ll~~a~~--~v~hgG~~t~~Eal~~G~P~v~~P~~~d~ 318 (391)
T d1pn3a_ 255 VLSRGWAD--------LVLPD------DGADCFVVGEVNLQELFGRVAA--AIHHDSAGTTLLAMRAGIPQIVVRRVVDN 318 (391)
T ss_dssp EEECTTTT--------CCCSS------CCTTCCEESSCCHHHHHTTSSC--EEEESCHHHHHHHHHHTCCEEEECSSCCB
T ss_pred EEeccccc--------ccccc------CCCCEEEecccCHHHHHhhccE--EEecCchHHHHHHHHhCCcEEEeccccCC
Confidence 88876643 11111 2478899999999999999887 9999999999999999999999999988
Q ss_pred ---chhhHHHHHHHhcceEEeccCCCCCCCHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHH
Q 042753 385 ---QYTNAQLLVDQLGVGIRVGEGTRNIPESDELARLLAQSVDGPRRERLKARELSGAALSAVVKGGSSDRDLNDFIKRI 461 (473)
Q Consensus 385 ---Q~~na~rv~~~~G~G~~l~~~~~~~~~~~~l~~~i~~~l~~~~~~~~~a~~~~~~~~~~~~~~gs~~~~~~~~~~~~ 461 (473)
|+.||++++ ++|+|+.++ ...+|+++|.++|+++|++ +|+++|+++++.++ . .|..++++.+++.+
T Consensus 319 ~~eQ~~nA~~l~-~~G~g~~l~---~~~~~~~~l~~~i~~~l~~--~~r~~a~~~a~~~~----~-~g~~~aa~~i~~~l 387 (391)
T d1pn3a_ 319 VVEQAYHADRVA-ELGVGVAVD---GPVPTIDSLSAALDTALAP--EIRARATTVADTIR----A-DGTTVAAQLLFDAV 387 (391)
T ss_dssp TTBCCHHHHHHH-HHTSEEEEC---CSSCCHHHHHHHHHHHTST--THHHHHHHHGGGSC----S-CHHHHHHHHHHHHH
T ss_pred cchHHHHHHHHH-HCCCEEEcC---cCCCCHHHHHHHHHHHhCH--HHHHHHHHHHHHHH----h-cCHHHHHHHHHHHH
Confidence 999999999 459999999 8889999999999999964 69999999998874 2 46788888888887
Q ss_pred Hhh
Q 042753 462 NEL 464 (473)
Q Consensus 462 ~~~ 464 (473)
.+.
T Consensus 388 ~~~ 390 (391)
T d1pn3a_ 388 SLE 390 (391)
T ss_dssp HHH
T ss_pred Hhc
Confidence 764
|
| >d1f0ka_ c.87.1.2 (A:) Peptidoglycan biosynthesis glycosyltransferase MurG {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Peptidoglycan biosynthesis glycosyltransferase MurG domain: Peptidoglycan biosynthesis glycosyltransferase MurG species: Escherichia coli [TaxId: 562]
Probab=99.92 E-value=1.5e-24 Score=208.09 Aligned_cols=304 Identities=18% Similarity=0.111 Sum_probs=178.9
Q ss_pred cEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCCCCh--hhhhhhccCCCCCCeeEEEcCCCCCCCCCChhhHHHHH
Q 042753 6 AHILVYPFPTSGHIIPLLDLTNRLLTLGLNVTVLITQNNL--PLLDSLNANHPSTSLQSLVLPQPKWPAGSPATRLLKFM 83 (473)
Q Consensus 6 ~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~--~~i~~~~~~~~~~~~~f~~l~~~~~~~~~~~~~~~~~~ 83 (473)
+||++.+.++.||++|+++|+++|.++||+|+|+++.... ..+... ++.+..++... +........+.
T Consensus 1 kkili~~~GtGGHv~~a~al~~~L~~~G~eV~~i~~~~~~~~~~~~~~-------~~~~~~~~~~~---~~~~~~~~~~~ 70 (351)
T d1f0ka_ 1 KRLMVMAGGTGGHVFPGLAVAHHLMAQGWQVRWLGTADRMEADLVPKH-------GIEIDFIRISG---LRGKGIKALIA 70 (351)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHTTTCEEEEEECTTSTHHHHGGGG-------TCEEEECCCCC---CTTCCHHHHHT
T ss_pred CEEEEEcCCcHHHHHHHHHHHHHHHhCCCEEEEEEeCCcchhhccccc-------CCcEEEEECCC---cCCCCHHHHHH
Confidence 5899988653499999999999999999999999876432 233443 56666666432 11111111111
Q ss_pred HHHH-HHhhHHHHHHHhcCCCCCcEEEeCCCc--chHHHHHHHhCCCcEEEecchHHHHHHHHhhhccCCCCCCCCCCCc
Q 042753 84 RVLR-ELHYPALLDWFKSHPSPPVAILSDFFL--GWTQGLAAELGLPRVVFSPSGAFALSVSFAMWTDLPTNDDPDNVDA 160 (473)
Q Consensus 84 ~~~~-~~~~~~l~~~l~~~~~~pD~VV~D~~~--~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~ 160 (473)
.... .........++.+. ++|.++..... ..+...|..+++|++.+.+.........
T Consensus 71 ~~~~~~~~~~~~~~i~~~~--~~~~~~~~~~~~~~~~~~~a~~~~ip~~~~~~~~~~~~~~~------------------ 130 (351)
T d1f0ka_ 71 APLRIFNAWRQARAIMKAY--KPDVVLGMGGYVSGPGGLAAWSLGIPVVLHEQNGIAGLTNK------------------ 130 (351)
T ss_dssp CHHHHHHHHHHHHHHHHHH--CCSEEEECSSTTHHHHHHHHHHTTCCEEEEECSSSCCHHHH------------------
T ss_pred HHHHHHHhHHHHHHHhhcc--ccceeeecccchhhhhhhhhhhcccceeecccccccchhHH------------------
Confidence 1111 12234556788888 99999876443 3566789999999987643211000000
Q ss_pred cccCCCCCCCCCCCccccchhhhccCCCCCchHHHHHHhhhccCCcEEeecchHHhhHHHHHHHHHhhCCCcEEEeccCC
Q 042753 161 LVSFPRVPNCPVYPWYQISHLYRTLKEGDPDWDLHRSNMMANKTSWGIVFNSFAELERVYIDHMKKEMGHDRVWAVGPVL 240 (473)
Q Consensus 161 ~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~le~~~~~~~~~~~~~~~~~~vGpl~ 240 (473)
..... ...+. .... ... .....+|+..
T Consensus 131 -------------------------------------~~~~~--~~~~~-~~~~------------~~~-~~~~~~~~~~ 157 (351)
T d1f0ka_ 131 -------------------------------------WLAKI--ATKVM-QAFP------------GAF-PNAEVVGNPV 157 (351)
T ss_dssp -------------------------------------HHTTT--CSEEE-ESST------------TSS-SSCEECCCCC
T ss_pred -------------------------------------Hhhhh--cceee-cccc------------ccc-cceeEEcCCc
Confidence 00000 00000 0000 000 2333444222
Q ss_pred CCCCcchhhccCCCCCCCChhhhHHHhcCCCCCcEEEEEeCCcccCCHHHHHHHHHHHHhCC-CcEEEEEeCCCccCCcc
Q 042753 241 PPDDDLVESMCRGGSSSVPAHDVLTWLDSRRDESVVYVCFGSRYVLTAKQIHELAAALEKTD-VDFVYCVREPDERHASQ 319 (473)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~V~vs~Gs~~~~~~~~~~~~~~al~~~~-~~~i~~~~~~~~~~~~~ 319 (473)
... . ...+...... .....+..+++.+||.... ...+.+.+.+.... ....+......
T Consensus 158 ~~~-~-----------~~~~~~~~~~-~~~~~~~~i~~~~gs~g~~--~~~~~~~~~~~~l~~~~~~i~~~~~~------ 216 (351)
T d1f0ka_ 158 RTD-V-----------LALPLPQQRL-AGREGPVRVLVVGGSQGAR--ILNQTMPQVAAKLGDSVTIWHQSGKG------ 216 (351)
T ss_dssp CHH-H-----------HTSCCHHHHH-TTCCSSEEEEEECTTTCCH--HHHHHHHHHHHHHGGGEEEEEECCTT------
T ss_pred ccc-c-----------ccchhHHhhh-hcccCCcccccccccchhh--hhHHHHHHhhhhhcccceeeeecccc------
Confidence 221 0 0011112222 2224566788888887542 22233334444332 22333333321
Q ss_pred cCCCCch--hhHHhhcCCCeEeecCccH-HHhhhccCccceeeccCchhHHHHHhhCCeEecCccc---ccchhhHHHHH
Q 042753 320 DCGVLPD--GFEDRVAGRGYVIRGWSQQ-VAILRHKAVGAFLTHCGWNSVLEGVSAGVVMLTWPMD---ADQYTNAQLLV 393 (473)
Q Consensus 320 ~~~~lp~--~~~~~~~~~nv~v~~~~pq-~~lL~~~~v~~~ItHgG~~s~~eal~~GvP~l~~P~~---~DQ~~na~rv~ 393 (473)
.... .........++.+.+|.++ .++|+.+++ +|||||.+|+.|++++|+|+|++|+. .||..||++++
T Consensus 217 ---~~~~~~~~~~~~~~~~~~v~~f~~~~~~lm~~adl--~It~~G~~T~~Eal~~g~P~I~iP~~~~~~~Q~~NA~~l~ 291 (351)
T d1f0ka_ 217 ---SQQSVEQAYAEAGQPQHKVTEFIDDMAAAYAWADV--VVCRSGALTVSEIAAAGLPALFVPFQHKDRQQYWNALPLE 291 (351)
T ss_dssp ---CHHHHHHHHHHTTCTTSEEESCCSCHHHHHHHCSE--EEECCCHHHHHHHHHHTCCEEECCCCCTTCHHHHHHHHHH
T ss_pred ---chhhhhhhhcccccccceeeeehhhHHHHHHhCch--hhccccchHHHHHHHhCCceeeeecccCCchHHHHHHHHH
Confidence 1111 1111223467778899865 568999997 99999999999999999999999975 48999999999
Q ss_pred HHhcceEEeccCCCCCCCHHHHHHHHHHH
Q 042753 394 DQLGVGIRVGEGTRNIPESDELARLLAQS 422 (473)
Q Consensus 394 ~~~G~G~~l~~~~~~~~~~~~l~~~i~~~ 422 (473)
+. |+|+.++ ..+++.+.|.++|.++
T Consensus 292 ~~-G~~~~~~---~~~~~~e~l~~~l~~l 316 (351)
T d1f0ka_ 292 KA-GAAKIIE---QPQLSVDAVANTLAGW 316 (351)
T ss_dssp HT-TSEEECC---GGGCCHHHHHHHHHTC
T ss_pred HC-CCEEEec---hhhCCHHHHHHHHHhh
Confidence 55 9999998 7889999999999886
|
| >d2bisa1 c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Pyrococcus abyssi [TaxId: 29292]
Probab=98.99 E-value=1.7e-07 Score=90.35 Aligned_cols=110 Identities=14% Similarity=0.144 Sum_probs=74.9
Q ss_pred CCCeEeecCccHH---HhhhccCccceeec----cCchhHHHHHhhCCeEecCcccccchhhHHHHHHHhcceEEeccCC
Q 042753 334 GRGYVIRGWSQQV---AILRHKAVGAFLTH----CGWNSVLEGVSAGVVMLTWPMDADQYTNAQLLVDQLGVGIRVGEGT 406 (473)
Q Consensus 334 ~~nv~v~~~~pq~---~lL~~~~v~~~ItH----gG~~s~~eal~~GvP~l~~P~~~DQ~~na~rv~~~~G~G~~l~~~~ 406 (473)
..++++..++|+. .++..+++ ++.- |..+++.||+++|+|+|+.... .....+. . +.|..++
T Consensus 308 ~~~~~~~~~~~~~~~~~~~~~adi--~v~~s~~e~~~~~~~Eama~G~Pvi~~~~g----~~~e~i~-~-~~G~~~~--- 376 (437)
T d2bisa1 308 GNVKVITEMLSREFVRELYGSVDF--VIIPSYFEPFGLVALEAMCLGAIPIASAVG----GLRDIIT-N-ETGILVK--- 376 (437)
T ss_dssp TTEEEECSCCCHHHHHHHHTTCSE--EEECCSCCSSCHHHHHHHTTTCEEEEESCT----THHHHCC-T-TTCEEEC---
T ss_pred ccceeccccCcHHHHHHHHhhhcc--ccccccccccchHHHHHHHCCCCEEEeCCC----CcHHhEE-C-CcEEEEC---
Confidence 3456667788864 46677776 4432 4456999999999999976443 3333343 4 6788776
Q ss_pred CCCCCHHHHHHHHHHHhC-Cc---HHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHhh
Q 042753 407 RNIPESDELARLLAQSVD-GP---RRERLKARELSGAALSAVVKGGSSDRDLNDFIKRINEL 464 (473)
Q Consensus 407 ~~~~~~~~l~~~i~~~l~-~~---~~~~~~a~~~~~~~~~~~~~~gs~~~~~~~~~~~~~~~ 464 (473)
.-+.++|.++|.++++ |+ ..+.+++++..+. -|-++.++++++...+.
T Consensus 377 --~~d~~~la~~i~~ll~~~~~~~~~~~~~~~~~~~~--------~s~~~~a~~~~~iY~~~ 428 (437)
T d2bisa1 377 --AGDPGELANAILKALELSRSDLSKFRENCKKRAMS--------FSWEKSAERYVKAYTGS 428 (437)
T ss_dssp --TTCHHHHHHHHHHHHTTTTSCTHHHHHHHHHHHHH--------SCHHHHHHHHHHHHHTC
T ss_pred --CCCHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHh--------CCHHHHHHHHHHHHHHH
Confidence 3578999999999986 43 4566666655433 35677778888876665
|
| >d2iw1a1 c.87.1.8 (A:2-371) Lipopolysaccharide core biosynthesis protein RfaG {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Lipopolysaccharide core biosynthesis protein RfaG species: Escherichia coli [TaxId: 562]
Probab=98.87 E-value=5.5e-07 Score=84.18 Aligned_cols=145 Identities=13% Similarity=0.188 Sum_probs=87.8
Q ss_pred hHHHhcCCCCCcEEEEEeCCcccCCHHHHHHHHHHHHhCC-----CcEEEEEeCCCccCCcccCCCCchhhHHhhc-CCC
Q 042753 263 VLTWLDSRRDESVVYVCFGSRYVLTAKQIHELAAALEKTD-----VDFVYCVREPDERHASQDCGVLPDGFEDRVA-GRG 336 (473)
Q Consensus 263 ~~~~l~~~~~~~~V~vs~Gs~~~~~~~~~~~~~~al~~~~-----~~~i~~~~~~~~~~~~~~~~~lp~~~~~~~~-~~n 336 (473)
....+.- +.+..+++..|+... .+.+..++++++... ..+++..+.+. .+.+ ..+.++.. ..+
T Consensus 185 ~r~~~~~-~~~~~~i~~~gr~~~--~Kg~~~li~a~~~l~~~~~~~~~~ii~g~~~-------~~~~-~~~~~~~~~~~~ 253 (370)
T d2iw1a1 185 YRQKNGI-KEQQNLLLQVGSDFG--RKGVDRSIEALASLPESLRHNTLLFVVGQDK-------PRKF-EALAEKLGVRSN 253 (370)
T ss_dssp HHHHTTC-CTTCEEEEEECSCTT--TTTHHHHHHHHHTSCHHHHHTEEEEEESSSC-------CHHH-HHHHHHHTCGGG
T ss_pred hhhccCC-CccceEEEEEecccc--ccchhhhcccccccccccccceeeecccccc-------cccc-cccccccccccc
Confidence 3344433 346677888888764 233555666665532 23334444321 0111 11222222 345
Q ss_pred eEeecCccH-HHhhhccCccceee--c--cCchhHHHHHhhCCeEecCcccccchhhHHHHHHHhcceEEeccCCCCCCC
Q 042753 337 YVIRGWSQQ-VAILRHKAVGAFLT--H--CGWNSVLEGVSAGVVMLTWPMDADQYTNAQLLVDQLGVGIRVGEGTRNIPE 411 (473)
Q Consensus 337 v~v~~~~pq-~~lL~~~~v~~~It--H--gG~~s~~eal~~GvP~l~~P~~~DQ~~na~rv~~~~G~G~~l~~~~~~~~~ 411 (473)
+....+..+ .++++.+++ +|. + |-.+++.||+++|+|+|+.. .......+.+. +.|..+. ..-+
T Consensus 254 v~~~g~~~~~~~~~~~adv--~v~ps~~E~~~~~~~EAma~G~PvI~s~----~~g~~e~i~~~-~~G~l~~----~~~d 322 (370)
T d2iw1a1 254 VHFFSGRNDVSELMAAADL--LLHPAYQEAAGIVLLEAITAGLPVLTTA----VCGYAHYIADA-NCGTVIA----EPFS 322 (370)
T ss_dssp EEEESCCSCHHHHHHHCSE--EEECCSCCSSCHHHHHHHHHTCCEEEET----TSTTTHHHHHH-TCEEEEC----SSCC
T ss_pred ccccccccccccccccccc--cccccccccccceeeecccCCeeEEEeC----CCChHHHhcCC-CceEEEc----CCCC
Confidence 666666644 468899998 553 2 44578999999999999864 44455666644 6786664 2357
Q ss_pred HHHHHHHHHHHhCCcHHHH
Q 042753 412 SDELARLLAQSVDGPRRER 430 (473)
Q Consensus 412 ~~~l~~~i~~~l~~~~~~~ 430 (473)
.+++.++|.++++|+ ..+
T Consensus 323 ~~~la~~i~~ll~d~-~~~ 340 (370)
T d2iw1a1 323 QEQLNEVLRKALTQS-PLR 340 (370)
T ss_dssp HHHHHHHHHHHHHCH-HHH
T ss_pred HHHHHHHHHHHHcCH-HHH
Confidence 999999999999987 443
|
| >d1v4va_ c.87.1.3 (A:) UDP-N-acetylglucosamine 2-epimerase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDP-N-acetylglucosamine 2-epimerase domain: UDP-N-acetylglucosamine 2-epimerase species: Thermus thermophilus [TaxId: 274]
Probab=98.81 E-value=2.4e-08 Score=94.55 Aligned_cols=348 Identities=14% Similarity=0.052 Sum_probs=190.4
Q ss_pred ccEEEEEcCCCCCChHHHHHHHHHHHhC-CCeEEEEeCCCChhhhhhhccCCCCCCeeE-EEcCCCCCCCCCChhhHHHH
Q 042753 5 GAHILVYPFPTSGHIIPLLDLTNRLLTL-GLNVTVLITQNNLPLLDSLNANHPSTSLQS-LVLPQPKWPAGSPATRLLKF 82 (473)
Q Consensus 5 ~~~Il~~~~~~~GH~~p~l~La~~L~~r-Gh~Vt~~~~~~~~~~i~~~~~~~~~~~~~f-~~l~~~~~~~~~~~~~~~~~ 82 (473)
|+||+++. +++..+.-+.+|.++|.+. +.++.++.+....+........ .++.- ..+... .....+.
T Consensus 2 MkkI~~v~-GtR~e~~kl~pli~~l~~~~~~~~~li~tG~H~~~~~~~~~~---~~i~~d~~l~~~-----~~~~s~~-- 70 (373)
T d1v4va_ 2 MKRVVLAF-GTRPEATKMAPVYLALRGIPGLKPLVLLTGQHREQLRQALSL---FGIQEDRNLDVM-----QERQALP-- 70 (373)
T ss_dssp CEEEEEEE-CSHHHHHHHHHHHHHHHTSTTEEEEEEECSSCHHHHHHHHHT---TTCCCSEECCCC-----SSCCCHH--
T ss_pred CCeEEEEE-EhhHHHHHHHHHHHHHHhCCCCCEEEEEccCChhhhhCcchh---cCCCccccCCCC-----CCCCCHH--
Confidence 78887665 4888888999999999874 8999998888665443322110 12211 011111 1111111
Q ss_pred HHHHHHHhhHHHHHHHhcCCCCCcEEEe--CCCcc-hHHHHHHHhCCCcEEEecchHHHHHHHHhhhccCCCCCCCCCCC
Q 042753 83 MRVLRELHYPALLDWFKSHPSPPVAILS--DFFLG-WTQGLAAELGLPRVVFSPSGAFALSVSFAMWTDLPTNDDPDNVD 159 (473)
Q Consensus 83 ~~~~~~~~~~~l~~~l~~~~~~pD~VV~--D~~~~-~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 159 (473)
..+. .+...+.+++.+. +||+|++ |.... .++.+|..++||.+.+....- +.+
T Consensus 71 -~~~~-~~~~~~~~~l~~~--kPD~vlv~GDr~e~la~a~aa~~~~ipi~HiegG~r-------------------sg~- 126 (373)
T d1v4va_ 71 -DLAA-RILPQAARALKEM--GADYVLVHGDTLTTFAVAWAAFLEGIPVGHVEAGLR-------------------SGN- 126 (373)
T ss_dssp -HHHH-HHHHHHHHHHHHT--TCSEEEEESSCHHHHHHHHHHHHTTCCEEEETCCCC-------------------CSC-
T ss_pred -HHHH-HHHHHHhhhhhhc--CcccccccccCccchhHHHHHHHhhhhheeeccccc-------------------ccc-
Confidence 2222 4446778889999 9999884 65555 456778888999998633210 000
Q ss_pred ccccCCCCCCCCCCCccccchhhhccCCCCCchHHHHHHhhhccCCcEEeecchHHhhHHHHHHHHHhhCCCcEEEec-c
Q 042753 160 ALVSFPRVPNCPVYPWYQISHLYRTLKEGDPDWDLHRSNMMANKTSWGIVFNSFAELERVYIDHMKKEMGHDRVWAVG-P 238 (473)
Q Consensus 160 ~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~le~~~~~~~~~~~~~~~~~~vG-p 238 (473)
+. .....+..++....+...+ +..+-...+. +..+. .-+ .+++.|| |
T Consensus 127 -------~~-------------------~~~~de~~R~~iskls~~h--f~~t~~~~~~--L~~~G-e~~-~~I~~vG~p 174 (373)
T d1v4va_ 127 -------LK-------------------EPFPEEANRRLTDVLTDLD--FAPTPLAKAN--LLKEG-KRE-EGILVTGQT 174 (373)
T ss_dssp -------TT-------------------SSTTHHHHHHHHHHHCSEE--EESSHHHHHH--HHTTT-CCG-GGEEECCCH
T ss_pred -------cc-------------------cCcchhhhhhhhcccccee--eecchhhhhh--hhhhc-ccc-cceeecccc
Confidence 00 0111223333333332222 2222211110 00000 111 4778888 4
Q ss_pred CCCCCCcchhhccCCCCCCCChhhhHHHhcCCCCCcEEEEEeCCcccC-CHHHHHHHHHHHHhCC--CcEEEEEeCCCcc
Q 042753 239 VLPPDDDLVESMCRGGSSSVPAHDVLTWLDSRRDESVVYVCFGSRYVL-TAKQIHELAAALEKTD--VDFVYCVREPDER 315 (473)
Q Consensus 239 l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~V~vs~Gs~~~~-~~~~~~~~~~al~~~~--~~~i~~~~~~~~~ 315 (473)
....- . ....+.........++.++|++-..... .......++..+.+.. ..++|-.....
T Consensus 175 ~~D~i-~-------------~~~~~~~~~~~~~~~~~~lvt~hr~~n~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~-- 238 (373)
T d1v4va_ 175 GVDAV-L-------------LAAKLGRLPEGLPEGPYVTVTMHRRENWPLLSDLAQALKRVAEAFPHLTFVYPVHLNP-- 238 (373)
T ss_dssp HHHHH-H-------------HHHHHCCCCTTCCSSCEEEECCCCGGGGGGHHHHHHHHHHHHHHCTTSEEEEECCSCH--
T ss_pred hhhHH-H-------------hhhhhcccccccccccceeEEeccccccchHHHHHHHHHHHhhhcccceeeeeecccc--
Confidence 33321 1 0000111111123567888988776543 3344555666665543 34444333221
Q ss_pred CCcccCCCCchhhHHh-hcCCCeEeecCccHHH---hhhccCccceeeccCchhHHHHHhhCCeEecCcccccchhhHHH
Q 042753 316 HASQDCGVLPDGFEDR-VAGRGYVIRGWSQQVA---ILRHKAVGAFLTHCGWNSVLEGVSAGVVMLTWPMDADQYTNAQL 391 (473)
Q Consensus 316 ~~~~~~~~lp~~~~~~-~~~~nv~v~~~~pq~~---lL~~~~v~~~ItHgG~~s~~eal~~GvP~l~~P~~~DQ~~na~r 391 (473)
..-....+. -..+|+.+.+.+++.+ +|.++.+ +|+.+|.+ ..||.++|+|.|.+....+-+.-
T Consensus 239 -------~~~~~~~~~~~~~~n~~~~~~l~~~~~l~ll~~s~~--vignSssg-i~Ea~~lg~P~Inir~~~eRqeg--- 305 (373)
T d1v4va_ 239 -------VVREAVFPVLKGVRNFVLLDPLEYGSMAALMRASLL--LVTDSGGL-QEEGAALGVPVVVLRNVTERPEG--- 305 (373)
T ss_dssp -------HHHHHHHHHHTTCTTEEEECCCCHHHHHHHHHTEEE--EEESCHHH-HHHHHHTTCCEEECSSSCSCHHH---
T ss_pred -------cchhhhhhhhcccccceeeccchHHHHHHHhhhcee--Eecccchh-hhcchhhcCcEEEeCCCccCHHH---
Confidence 000111111 1346788878887655 5777885 99988754 56999999999999664444432
Q ss_pred HHHHhcceEEeccCCCCCCCHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHH
Q 042753 392 LVDQLGVGIRVGEGTRNIPESDELARLLAQSVDGPRRERLKARELSGAALSAVVKGGSSDRDLNDFIKRI 461 (473)
Q Consensus 392 v~~~~G~G~~l~~~~~~~~~~~~l~~~i~~~l~~~~~~~~~a~~~~~~~~~~~~~~gs~~~~~~~~~~~~ 461 (473)
++ . |.-+... .+.++|.++++.+++++ .++++......-+ -+|.++++-++.+.+++
T Consensus 306 ~~-~-g~nvlv~------~d~~~I~~~i~~~l~~~-~~~~~~~~~~npY----GdG~as~rI~~~L~~~~ 362 (373)
T d1v4va_ 306 LK-A-GILKLAG------TDPEGVYRVVKGLLENP-EELSRMRKAKNPY----GDGKAGLMVARGVAWRL 362 (373)
T ss_dssp HH-H-TSEEECC------SCHHHHHHHHHHHHTCH-HHHHHHHHSCCSS----CCSCHHHHHHHHHHHHT
T ss_pred Hh-c-CeeEEcC------CCHHHHHHHHHHHHcCH-HHHhhcccCCCCC----CCCHHHHHHHHHHHHHh
Confidence 22 4 6565443 57999999999999997 7776555543333 35666776666666655
|
| >d1o6ca_ c.87.1.3 (A:) UDP-N-acetylglucosamine 2-epimerase {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDP-N-acetylglucosamine 2-epimerase domain: UDP-N-acetylglucosamine 2-epimerase species: Bacillus subtilis [TaxId: 1423]
Probab=98.71 E-value=4e-08 Score=93.06 Aligned_cols=350 Identities=15% Similarity=0.109 Sum_probs=185.3
Q ss_pred cEEEEEcCCCCCChHHHHHHHHHHHhC-CCeEEEEeCCCChhhhhhhccCCCCCCeeE-EEcCCCCCCCCCChhhHHHHH
Q 042753 6 AHILVYPFPTSGHIIPLLDLTNRLLTL-GLNVTVLITQNNLPLLDSLNANHPSTSLQS-LVLPQPKWPAGSPATRLLKFM 83 (473)
Q Consensus 6 ~~Il~~~~~~~GH~~p~l~La~~L~~r-Gh~Vt~~~~~~~~~~i~~~~~~~~~~~~~f-~~l~~~~~~~~~~~~~~~~~~ 83 (473)
+||+++. +++..+.-+.+|.++|.++ +.++.++.+....+........ .++.. ..+.... + ... ..
T Consensus 3 ~Ki~~v~-GtR~e~~kl~pli~~l~~~~~~~~~li~tG~H~~~~~~~~~~---~~i~~~~~~~~~~-~----~~~---~~ 70 (377)
T d1o6ca_ 3 LKVMTVF-GTRPEAIKMAPLVLELKKYPEIDSYVTVTAQHRQMLDQVLDA---FHIKPDFDLNIMK-E----RQT---LA 70 (377)
T ss_dssp EEEEEEE-CSHHHHHHHHHHHHHGGGCTTEEEEEEECCSCGGGTHHHHHH---TTCCCSEECCCCC-T----TCC---HH
T ss_pred ceEEEEE-EchHhHHHHHHHHHHHHhCCCCCEEEEEeCCCHHHHHHHHhh---cCCCCceeeecCC-C----CCC---HH
Confidence 4777666 7999999999999999987 6799988887543332222110 01110 1111110 0 111 11
Q ss_pred HHHHHHhhHHHHHHHhcCCCCCcEEEe--CCCcc-hHHHHHHHhCCCcEEEecchHHHHHHHHhhhccCCCCCCCCCCCc
Q 042753 84 RVLRELHYPALLDWFKSHPSPPVAILS--DFFLG-WTQGLAAELGLPRVVFSPSGAFALSVSFAMWTDLPTNDDPDNVDA 160 (473)
Q Consensus 84 ~~~~~~~~~~l~~~l~~~~~~pD~VV~--D~~~~-~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~ 160 (473)
..+. .....+.+++.+. +||+||+ |.... .++.+|..++||.+.+...-- +.+
T Consensus 71 ~~~~-~~i~~~~~~~~~~--kpD~v~v~GDr~e~la~a~aa~~~~Ipi~HiegG~~-------------------s~~-- 126 (377)
T d1o6ca_ 71 EITS-NALVRLDELFKDI--KPDIVLVHGDTTTTFAGSLAAFYHQIAVGHVEAGLR-------------------TGN-- 126 (377)
T ss_dssp HHHH-HHHHHHHHHHHHH--CCSEEEEETTCHHHHHHHHHHHHTTCEEEEESCCCC-------------------CSC--
T ss_pred HHHH-HHHHhhhhhhhhc--ccceeEeeecccccchhhhhhhhccceEEEEecccc-------------------ccc--
Confidence 2222 4446677888888 9998774 55544 567899999999988643311 000
Q ss_pred cccCCCCCCCCCCCccccchhhhccCCCCCchHHHHHHhhhccCCcEEeecchHHhhHHHHHHHHH-hhCCCcEEEec-c
Q 042753 161 LVSFPRVPNCPVYPWYQISHLYRTLKEGDPDWDLHRSNMMANKTSWGIVFNSFAELERVYIDHMKK-EMGHDRVWAVG-P 238 (473)
Q Consensus 161 ~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~le~~~~~~~~~-~~~~~~~~~vG-p 238 (473)
.. .....+..++....+...+ ++.+-... +-+.. -....+++.|| |
T Consensus 127 --~~-----------------------~~~~de~~R~~iskls~~h--f~~t~~~~-----~~L~~~G~~~~~I~~vG~~ 174 (377)
T d1o6ca_ 127 --KY-----------------------SPFPEELNRQMTGAIADLH--FAPTGQAK-----DNLLKENKKADSIFVTGNT 174 (377)
T ss_dssp --TT-----------------------TTTTHHHHHHHHHHHCSEE--EESSHHHH-----HHHHHTTCCGGGEEECCCH
T ss_pred --cc-----------------------ccCchhhhccccccceeEE--eecchhhh-----hhhhhhccccceEeeccch
Confidence 00 0112233344444433332 22221111 11111 11104789999 4
Q ss_pred CCCCCCcchhhccCCCCCCCChhhhHHHhcCCCCCcEEEEEeCCcccCC---HHHHHHHHHHHHhCCC-cEEEEEeCCCc
Q 042753 239 VLPPDDDLVESMCRGGSSSVPAHDVLTWLDSRRDESVVYVCFGSRYVLT---AKQIHELAAALEKTDV-DFVYCVREPDE 314 (473)
Q Consensus 239 l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~V~vs~Gs~~~~~---~~~~~~~~~al~~~~~-~~i~~~~~~~~ 314 (473)
....- . . ... .........++ ..++.+++++-...... ...+..+...+..... .+++....+
T Consensus 175 ~~D~i-~--~-~~~----~~~~~~~~~~~---~~~~~ilvt~Hr~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-- 241 (377)
T d1o6ca_ 175 AIDAL-N--T-TVR----DGYSHPVLDQV---GEDKMILLTAHRRENLGEPMENMFKAIRRIVGEFEDVQVVYPVHLN-- 241 (377)
T ss_dssp HHHHH-H--H-HCC----SSCCCSTTTTT---TTSEEEEECC----------HHHHHHHHHHHHHCTTEEEEEC------
T ss_pred hHHHH-H--H-HHH----HHHhhhhhhhc---cCCceEEEEeccccccccchHHHHHHHHhhcccccccccccccccc--
Confidence 33321 0 0 000 00111111122 34677888776554332 2334445555555443 333333221
Q ss_pred cCCcccCCCCchhhHHh-hcCCCeEeecCccHHH---hhhccCccceeeccCchhHHHHHhhCCeEecCcccccchhhHH
Q 042753 315 RHASQDCGVLPDGFEDR-VAGRGYVIRGWSQQVA---ILRHKAVGAFLTHCGWNSVLEGVSAGVVMLTWPMDADQYTNAQ 390 (473)
Q Consensus 315 ~~~~~~~~~lp~~~~~~-~~~~nv~v~~~~pq~~---lL~~~~v~~~ItHgG~~s~~eal~~GvP~l~~P~~~DQ~~na~ 390 (473)
..+-....+. ...+|+.+.+.+++.+ +|.++++ +|+.+|.+ ..||-+.|+|+|.+.-..|++.-
T Consensus 242 -------~~~~~~~~~~~~~~~ni~~~~~l~~~~fl~llk~s~~--vIgnSss~-i~Ea~~lg~P~Inir~~tERqe~-- 309 (377)
T d1o6ca_ 242 -------PVVREAAHKHFGDSDRVHLIEPLEVIDFHNFAAKSHF--ILTDSGGV-QEEAPSLGKPVLVLRDTTERPEG-- 309 (377)
T ss_dssp -------CHHHHHHHHC--CCSSEEECCCCCHHHHHHHHHHCSE--EEEC--CH-HHHGGGGTCCEEEECSCCC---C--
T ss_pred -------cccchhhhhccccccceEeccccchHHHHHHHhhhhe--eecccchh-HHhhhhhhceEEEeCCCCcCcch--
Confidence 1111111111 1356899889988655 6789996 99999988 77999999999999654444432
Q ss_pred HHHHHhcceEEeccCCCCCCCHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHH
Q 042753 391 LLVDQLGVGIRVGEGTRNIPESDELARLLAQSVDGPRRERLKARELSGAALSAVVKGGSSDRDLNDFIKRIN 462 (473)
Q Consensus 391 rv~~~~G~G~~l~~~~~~~~~~~~l~~~i~~~l~~~~~~~~~a~~~~~~~~~~~~~~gs~~~~~~~~~~~~~ 462 (473)
++ . |.-+..+ .+.++|.+++.+++++. .+.++..+...-+ -+|+++++-++.|++++.
T Consensus 310 -~~-~-g~nilv~------~~~~~I~~~i~~~l~~~-~~~~~~~~~~npY----GdG~as~rI~~~L~~~~~ 367 (377)
T d1o6ca_ 310 -VE-A-GTLKLAG------TDEENIYQLAKQLLTDP-DEYKKMSQASNPY----GDGEASRRIVEELLFHYG 367 (377)
T ss_dssp -TT-T-TSSEEEC------SCHHHHHHHHHHHHHCH-HHHHHHHHCCCTT----CCSCHHHHHHHHHHHHTT
T ss_pred -hh-c-CeeEECC------CCHHHHHHHHHHHHhCh-HHHhhhccCCCCC----CCChHHHHHHHHHHHhhC
Confidence 22 4 6555544 57899999999999986 7776665544333 456677777777776654
|
| >d1f6da_ c.87.1.3 (A:) UDP-N-acetylglucosamine 2-epimerase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDP-N-acetylglucosamine 2-epimerase domain: UDP-N-acetylglucosamine 2-epimerase species: Escherichia coli [TaxId: 562]
Probab=98.53 E-value=2.3e-06 Score=80.52 Aligned_cols=333 Identities=13% Similarity=0.058 Sum_probs=177.8
Q ss_pred cEEEEEcCCCCCChHHHHHHHHHHHhC-CCeEEEEeCCCChhhhhhhccCCCCCCeeE-EEcCCCCCCCCCChhhHHHHH
Q 042753 6 AHILVYPFPTSGHIIPLLDLTNRLLTL-GLNVTVLITQNNLPLLDSLNANHPSTSLQS-LVLPQPKWPAGSPATRLLKFM 83 (473)
Q Consensus 6 ~~Il~~~~~~~GH~~p~l~La~~L~~r-Gh~Vt~~~~~~~~~~i~~~~~~~~~~~~~f-~~l~~~~~~~~~~~~~~~~~~ 83 (473)
|||+++. +++..+.-+.+|.++|.+. +.++.++.+....+........ .++.. ..+... .....+.
T Consensus 1 MKi~~v~-GtR~e~~kl~pli~~l~~~~~~~~~li~tG~H~~~~~~~~~~---~~~~~~~~~~~~-----~~~~~~~--- 68 (376)
T d1f6da_ 1 MKVLTVF-GTRPEAIKMAPLVHALAKDPFFEAKVCVTAQHREMLDQVLKL---FSIVPDYDLNIM-----QPGQGLT--- 68 (376)
T ss_dssp CEEEEEE-CSHHHHHHHHHHHHHHHHCTTCEEEEEECCTTGGGGHHHHHH---TTCCCSEECCCC-----SSSSCHH---
T ss_pred CeEEEEE-EhhHhHHHHHHHHHHHHhCCCCCEEEEEcCCCHHHHHHHHHh---cCCCCCcccccC-----CCCCCHH---
Confidence 5677777 7999999999999999886 7899999887553332221100 01110 111110 0111111
Q ss_pred HHHHHHhhHHHHHHHhcCCCCCcEEEe--CCCcc-hHHHHHHHhCCCcEEEecchHHHHHHHHhhhccCCCCCCCCCCCc
Q 042753 84 RVLRELHYPALLDWFKSHPSPPVAILS--DFFLG-WTQGLAAELGLPRVVFSPSGAFALSVSFAMWTDLPTNDDPDNVDA 160 (473)
Q Consensus 84 ~~~~~~~~~~l~~~l~~~~~~pD~VV~--D~~~~-~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~ 160 (473)
..+. .....+.+.+.+. +||+||+ |.... .++.+|..++||.+.+...-- +.+
T Consensus 69 ~~~~-~~i~~~~~~~~~~--kPD~v~v~GDr~e~la~a~aa~~~~ipi~HiegG~~-------------------s~~-- 124 (376)
T d1f6da_ 69 EITC-RILEGLKPILAEF--KPDVVLVHGDTTTTLATSLAAFYQRIPVGHVEAGLR-------------------TGD-- 124 (376)
T ss_dssp HHHH-HHHHHHHHHHHHH--CCSEEEEETTCHHHHHHHHHHHTTTCCEEEESCCCC-------------------CSC--
T ss_pred HHHH-HHHHhhHHHHHhc--cCcceeeeccccchhhHHHHHHhhCceEEEEecccc-------------------ccc--
Confidence 1222 3345677788888 9998774 55544 566789999999998744310 000
Q ss_pred cccCCCCCCCCCCCccccchhhhccCCCCCchHHHHHHhhhccCCcEEeecchHHhhHHHHHHHHH-hhCCCcEEEec-c
Q 042753 161 LVSFPRVPNCPVYPWYQISHLYRTLKEGDPDWDLHRSNMMANKTSWGIVFNSFAELERVYIDHMKK-EMGHDRVWAVG-P 238 (473)
Q Consensus 161 ~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~le~~~~~~~~~-~~~~~~~~~vG-p 238 (473)
+. .....+..++....+...+ +..+-...+ -+.. -....+++.|| |
T Consensus 125 ------~~-------------------~~~pde~~R~~iskls~~h--f~~~~~~~~-----~L~~~G~~~~~I~~vG~~ 172 (376)
T d1f6da_ 125 ------LY-------------------SPWPEEANRTLTGHLAMYH--FSPTETSRQ-----NLLRENVADSRIFITGNT 172 (376)
T ss_dssp ------TT-------------------SSTTHHHHHHHHHHTCSEE--EESSHHHHH-----HHHHTTCCGGGEEECCCH
T ss_pred ------cc-------------------ccCchhhhhhhhccceeEE--EeccHHHHh-----HHHhcCCCccccceecCc
Confidence 00 0112233344444333332 222211111 1111 11114788889 4
Q ss_pred CCCCCCcchhhccCCCCCCCChhhhHH-----HhcCCCCCcEEEEEeCCcccCCHHHHHH---HHHHHHhCCCcEEEEEe
Q 042753 239 VLPPDDDLVESMCRGGSSSVPAHDVLT-----WLDSRRDESVVYVCFGSRYVLTAKQIHE---LAAALEKTDVDFVYCVR 310 (473)
Q Consensus 239 l~~~~~~~~~~~~~~~~~~~~~~~~~~-----~l~~~~~~~~V~vs~Gs~~~~~~~~~~~---~~~al~~~~~~~i~~~~ 310 (473)
....- . ..... ....+.+.+ .......++.|+|++=...+... .++. .+..+.+....+.+...
T Consensus 173 ~~D~l-~-~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~ilvt~H~~~~~~~-~~~~i~~~l~~~~~~~~~~~ii~p 244 (376)
T d1f6da_ 173 VIDAL-L-WVRDQ-----VMSSDKLRSELAANYPFIDPDKKMILVTGHRRESFGR-GFEEICHALADIATTHQDIQIVYP 244 (376)
T ss_dssp HHHHH-H-HHHHH-----TTTCHHHHHHHHTTCTTCCTTSEEEEECCCCBSSCCH-HHHHHHHHHHHHHHHCTTEEEEEE
T ss_pred hHHHH-H-HHHhh-----hhccchhhhhhhccccccCCCCceEEEecccchhhhh-hHHHHHHHHhhhhhhcceeEEecc
Confidence 43211 0 00000 000111111 11112357889998865554433 3333 44444444455555554
Q ss_pred CCCccCCcccCCCCchhhHHhh-cCCCeEeecCccHHH---hhhccCccceeeccCchhHHHHHhhCCeEecCcccccch
Q 042753 311 EPDERHASQDCGVLPDGFEDRV-AGRGYVIRGWSQQVA---ILRHKAVGAFLTHCGWNSVLEGVSAGVVMLTWPMDADQY 386 (473)
Q Consensus 311 ~~~~~~~~~~~~~lp~~~~~~~-~~~nv~v~~~~pq~~---lL~~~~v~~~ItHgG~~s~~eal~~GvP~l~~P~~~DQ~ 386 (473)
... . ...-....+.. ..+|+.+.+-+++.+ +|.++++ +|+.+|. ...||-++|+|.|.+.-..+|+
T Consensus 245 ~~~----~---~~~~~~~~~~~~~~~ni~~~~~l~~~~fl~ll~~a~~--vignSss-gi~Ea~~lg~P~Inir~~ter~ 314 (376)
T d1f6da_ 245 VHL----N---PNVREPVNRILGHVKNVILIDPQEYLPFVWLMNHAWL--ILTDSGG-IQEEAPSLGKPVLVMRDTTERP 314 (376)
T ss_dssp CCB----C---HHHHHHHHHHHTTCTTEEEECCCCHHHHHHHHHHCSE--EEESSSG-GGGTGGGGTCCEEECSSCCSCH
T ss_pred ccc----c---hhhhhhHhhhhcccccceeeccccHHHHHHHHhhceE--EEecCcc-hHhhHHHhCCCEEEcCCCccCc
Confidence 431 0 00111111211 246888777777654 7888996 9998875 3669999999999885444455
Q ss_pred hhHHHHHHHhcceEEeccCCCCCCCHHHHHHHHHHHhCCcHHHHHHHHHH
Q 042753 387 TNAQLLVDQLGVGIRVGEGTRNIPESDELARLLAQSVDGPRRERLKAREL 436 (473)
Q Consensus 387 ~na~rv~~~~G~G~~l~~~~~~~~~~~~l~~~i~~~l~~~~~~~~~a~~~ 436 (473)
.++. . |.-+... .+.++|.+++.+++.++ .+++...+.
T Consensus 315 ---~~~~-~-g~~i~v~------~~~~~I~~ai~~~l~~~-~~~~~~~~~ 352 (376)
T d1f6da_ 315 ---EAVT-A-GTVRLVG------TDKQRIVEEVTRLLKDE-NEYQAMSRA 352 (376)
T ss_dssp ---HHHH-H-TSEEECC------SSHHHHHHHHHHHHHCH-HHHHHHHHS
T ss_pred ---ccee-c-CeeEECC------CCHHHHHHHHHHHHhCh-HhhhhhccC
Confidence 4554 5 5554443 57999999999999886 666555444
|
| >d1rzua_ c.87.1.8 (A:) Glycogen synthase 1, GlgA {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Agrobacterium tumefaciens [TaxId: 358]
Probab=98.33 E-value=1.8e-05 Score=76.96 Aligned_cols=168 Identities=10% Similarity=0.041 Sum_probs=92.4
Q ss_pred CCcEEEEEeCCccc-CCHHHHHHHHHHHHhCCCcEEEEEeCCCccCCcccCCCCchhhHH--hhcCCCeEeecCccHHH-
Q 042753 272 DESVVYVCFGSRYV-LTAKQIHELAAALEKTDVDFVYCVREPDERHASQDCGVLPDGFED--RVAGRGYVIRGWSQQVA- 347 (473)
Q Consensus 272 ~~~~V~vs~Gs~~~-~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~lp~~~~~--~~~~~nv~v~~~~pq~~- 347 (473)
++..+++..|.... ...+.+...+..+.+.+.++++.-.++. .....+.. .-...++.+..+.++..
T Consensus 289 ~~~~~i~~vgrl~~~KG~~~Ll~a~~~~~~~~~~l~~~G~G~~---------~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 359 (477)
T d1rzua_ 289 DGSPLFCVISRLTWQKGIDLMAEAVDEIVSLGGRLVVLGAGDV---------ALEGALLAAASRHHGRVGVAIGYNEPLS 359 (477)
T ss_dssp SSSCEEEEESCBSTTTTHHHHHTTHHHHHHTTCEEEEEECBCH---------HHHHHHHHHHHHTTTTEEEEESCCHHHH
T ss_pred CCccEEEEEeeeeecCCcHHHHHHHHHHHhhCCeEEEEecCCc---------hHHHHHHHHHhhcCCeEEEEcccChhHH
Confidence 44556778888864 3345444444444456777776554431 01111111 11245666656665432
Q ss_pred --hhhccCccceeecc---Cch-hHHHHHhhCCeEecCcccc--c---chhhHHHHHHHhcceEEeccCCCCCCCHHHHH
Q 042753 348 --ILRHKAVGAFLTHC---GWN-SVLEGVSAGVVMLTWPMDA--D---QYTNAQLLVDQLGVGIRVGEGTRNIPESDELA 416 (473)
Q Consensus 348 --lL~~~~v~~~ItHg---G~~-s~~eal~~GvP~l~~P~~~--D---Q~~na~rv~~~~G~G~~l~~~~~~~~~~~~l~ 416 (473)
+++.+++ ||.-+ |.| +++||+++|+|+|+.-..+ | .......+. .-+.|...+ .-+.++|.
T Consensus 360 ~~~~~~aD~--~v~PS~~E~fglv~lEAma~G~PvVas~~GG~~E~v~d~~~~~~~~-~~~~G~l~~-----~~d~~~la 431 (477)
T d1rzua_ 360 HLMQAGCDA--IIIPSRFEPCGLTQLYALRYGCIPVVARTGGLADTVIDANHAALAS-KAATGVQFS-----PVTLDGLK 431 (477)
T ss_dssp HHHHHHCSE--EEECCSCCSSCSHHHHHHHHTCEEEEESSHHHHHHCCBCCHHHHHT-TCCCBEEES-----SCSHHHHH
T ss_pred HHHHHhCcc--ccCCccccCCCHHHHHHHHcCCCEEEcCCCCCcceeecCCcccccc-CCCceEEeC-----CCCHHHHH
Confidence 5666776 77665 334 8889999999999854431 1 111122222 214687776 56899999
Q ss_pred HHHHHHhC---CcHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHh
Q 042753 417 RLLAQSVD---GPRRERLKARELSGAALSAVVKGGSSDRDLNDFIKRINE 463 (473)
Q Consensus 417 ~~i~~~l~---~~~~~~~~a~~~~~~~~~~~~~~gs~~~~~~~~~~~~~~ 463 (473)
++|+++++ |+ +..++ +++.. ++.--|-++.+++.++...+
T Consensus 432 ~ai~~~l~~~~~~-~~~~~---~~~~a---~~~~fsw~~~a~~~~~lY~~ 474 (477)
T d1rzua_ 432 QAIRRTVRYYHDP-KLWTQ---MQKLG---MKSDVSWEKSAGLYAALYSQ 474 (477)
T ss_dssp HHHHHHHHHHTCH-HHHHH---HHHHH---HTCCCBHHHHHHHHHHHHHH
T ss_pred HHHHHHHhhhCCH-HHHHH---HHHHH---HHhhCCHHHHHHHHHHHHHH
Confidence 99998875 43 32222 22222 13335556666666665443
|
| >d2f9fa1 c.87.1.8 (A:2-167) First mannosyl transferase WbaZ {Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: First mannosyl transferase WbaZ species: Archaeoglobus fulgidus [TaxId: 2234]
Probab=97.81 E-value=3.6e-05 Score=63.13 Aligned_cols=136 Identities=11% Similarity=0.135 Sum_probs=83.8
Q ss_pred EEEeCCcccCCHHHHHHHHHHHHhCC-CcEEEEEeCCCccCCcccCCCCchhhHH---hhcCCCeEeecCccHH---Hhh
Q 042753 277 YVCFGSRYVLTAKQIHELAAALEKTD-VDFVYCVREPDERHASQDCGVLPDGFED---RVAGRGYVIRGWSQQV---AIL 349 (473)
Q Consensus 277 ~vs~Gs~~~~~~~~~~~~~~al~~~~-~~~i~~~~~~~~~~~~~~~~~lp~~~~~---~~~~~nv~v~~~~pq~---~lL 349 (473)
|+..|.+.. ..-...+++++++.+ .+++ .++... . ..--+.+.+ +...+|+++.+|+|.. .++
T Consensus 15 ~l~iGrl~~--~K~~~~~i~a~~~l~~~~l~-ivg~~~----~---~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~ 84 (166)
T d2f9fa1 15 WLSVNRIYP--EKRIELQLEVFKKLQDEKLY-IVGWFS----K---GDHAERYARKIMKIAPDNVKFLGSVSEEELIDLY 84 (166)
T ss_dssp EEEECCSSG--GGTHHHHHHHHHHCTTSCEE-EEBCCC----T---TSTHHHHHHHHHHHSCTTEEEEESCCHHHHHHHH
T ss_pred EEEEecCcc--ccCHHHHHHHHHHhcCCeEE-EEEecc----c---ccchhhhhhhhcccccCcEEEeeccccccccccc
Confidence 556788753 334455677777654 4444 454321 0 111112222 2235789999999884 467
Q ss_pred hccCccceeec----cCchhHHHHHhhCCeEecCcccccchhhHHHHHHHhcceEEeccCCCCCCCHHHHHHHHHHHhCC
Q 042753 350 RHKAVGAFLTH----CGWNSVLEGVSAGVVMLTWPMDADQYTNAQLLVDQLGVGIRVGEGTRNIPESDELARLLAQSVDG 425 (473)
Q Consensus 350 ~~~~v~~~ItH----gG~~s~~eal~~GvP~l~~P~~~DQ~~na~rv~~~~G~G~~l~~~~~~~~~~~~l~~~i~~~l~~ 425 (473)
..+++ +|.- |...+++||+++|+|+|+.+..+ ....+... ..|...+ .+.+++.++|.++++|
T Consensus 85 ~~ad~--~i~ps~~e~~~~~~~Ea~~~g~pvi~s~~~~----~~e~i~~~-~~g~~~~------~d~~~~~~~i~~l~~~ 151 (166)
T d2f9fa1 85 SRCKG--LLCTAKDEDFGLTPIEAMASGKPVIAVNEGG----FKETVINE-KTGYLVN------ADVNEIIDAMKKVSKN 151 (166)
T ss_dssp HHCSE--EEECCSSCCSCHHHHHHHHTTCCEEEESSHH----HHHHCCBT-TTEEEEC------SCHHHHHHHHHHHHHC
T ss_pred ccccc--cccccccccccccccccccccccceeecCCc----ceeeecCC-cccccCC------CCHHHHHHHHHHHHhC
Confidence 77887 3332 23458999999999999986543 22334423 5676554 3689999999999998
Q ss_pred cHHHHHHHHH
Q 042753 426 PRRERLKARE 435 (473)
Q Consensus 426 ~~~~~~~a~~ 435 (473)
++.+++++.+
T Consensus 152 ~~~~~~~~~~ 161 (166)
T d2f9fa1 152 PDKFKKDCFR 161 (166)
T ss_dssp TTTTHHHHHH
T ss_pred HHHHHHHHHH
Confidence 6356665544
|
| >d1pswa_ c.87.1.7 (A:) ADP-heptose LPS heptosyltransferase II {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: ADP-heptose LPS heptosyltransferase II domain: ADP-heptose LPS heptosyltransferase II species: Escherichia coli [TaxId: 562]
Probab=96.68 E-value=0.044 Score=49.50 Aligned_cols=104 Identities=14% Similarity=0.036 Sum_probs=70.1
Q ss_pred cEEEEEcCCCCCChHHHHHHHHHHHhC--CCeEEEEeCCCChhhhhhhccCCCCCCee-EEEcCCCCCCCCCChhhHHHH
Q 042753 6 AHILVYPFPTSGHIIPLLDLTNRLLTL--GLNVTVLITQNNLPLLDSLNANHPSTSLQ-SLVLPQPKWPAGSPATRLLKF 82 (473)
Q Consensus 6 ~~Il~~~~~~~GH~~p~l~La~~L~~r--Gh~Vt~~~~~~~~~~i~~~~~~~~~~~~~-f~~l~~~~~~~~~~~~~~~~~ 82 (473)
||||++-..+.|++.-+.++.+.|.++ +.+|++++.+.+.+.++.. +.++ +..++... . ...+
T Consensus 1 MkILii~~~~iGD~il~~p~i~~Lk~~~P~~~I~~l~~~~~~~l~~~~------p~id~v~~~~~~~--~------~~~~ 66 (348)
T d1pswa_ 1 MKILVIGPSWVGDMMMSQSLYRTLQARYPQAIIDVMAPAWCRPLLSRM------PEVNEAIPMPLGH--G------ALEI 66 (348)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHHHSTTCEEEEEECGGGHHHHTTC------TTEEEEEEC---------------CH
T ss_pred CeEEEEcCCChHHHHHHHHHHHHHHHHCCCCEEEEEEChhHHHHHhhC------CCcCEEEEecCcc--c------cchh
Confidence 799999988999999999999999996 9999999998777665543 3453 33333110 0 0000
Q ss_pred HHHHHHHhhHHHHHHHhcCCCCCcEEEeCCCcchHHHHHHHhCCCcEEE
Q 042753 83 MRVLRELHYPALLDWFKSHPSPPVAILSDFFLGWTQGLAAELGLPRVVF 131 (473)
Q Consensus 83 ~~~~~~~~~~~l~~~l~~~~~~pD~VV~D~~~~~~~~~A~~~giP~v~~ 131 (473)
.....+...+... ++|++|.-........++...+++....
T Consensus 67 ------~~~~~l~~~l~~~--~~D~~i~~~~~~~~~~~~~~~~~~~~~~ 107 (348)
T d1pswa_ 67 ------GERRKLGHSLREK--RYDRAYVLPNSFKSALVPLFAGIPHRTG 107 (348)
T ss_dssp ------HHHHHHHHHTTTT--TCSEEEECSCCSGGGHHHHHTTCSEEEE
T ss_pred ------hhhhhHHHHhhhc--ccceEeecccccchhhHHHhhccccccc
Confidence 0112234445556 8999997655556667788888888664
|
| >d2bfwa1 c.87.1.8 (A:218-413) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Pyrococcus abyssi [TaxId: 29292]
Probab=96.56 E-value=0.022 Score=47.02 Aligned_cols=78 Identities=14% Similarity=0.101 Sum_probs=54.6
Q ss_pred CCeEeecCccHH---HhhhccCcccee----eccCchhHHHHHhhCCeEecCcccccchhhHHHHHHHhcceEEeccCCC
Q 042753 335 RGYVIRGWSQQV---AILRHKAVGAFL----THCGWNSVLEGVSAGVVMLTWPMDADQYTNAQLLVDQLGVGIRVGEGTR 407 (473)
Q Consensus 335 ~nv~v~~~~pq~---~lL~~~~v~~~I----tHgG~~s~~eal~~GvP~l~~P~~~DQ~~na~rv~~~~G~G~~l~~~~~ 407 (473)
..+.+..+++.. .++..+++ +| ..|-.+++.||+++|+|+|+--. ......+. . +.|...+
T Consensus 92 ~~~~~~~~~~~~~l~~~~~~~di--~v~ps~~e~~~~~~~Eam~~G~pvI~~~~----~~~~e~i~-~-~~g~~~~---- 159 (196)
T d2bfwa1 92 NVKVITEMLSREFVRELYGSVDF--VIIPSYFEPFGLVALEAMCLGAIPIASAV----GGLRDIIT-N-ETGILVK---- 159 (196)
T ss_dssp TEEEECSCCCHHHHHHHHTTCSE--EEECCSCCSSCHHHHHHHHTTCEEEEESC----HHHHHHCC-T-TTCEEEC----
T ss_pred eeEEeeeccccccchhccccccc--cccccccccccccchhhhhcCceeeecCC----Cccceeec-C-CceeeEC----
Confidence 345566788754 46777887 56 34557799999999999998533 22233232 4 6787776
Q ss_pred CCCCHHHHHHHHHHHhCC
Q 042753 408 NIPESDELARLLAQSVDG 425 (473)
Q Consensus 408 ~~~~~~~l~~~i~~~l~~ 425 (473)
.-+.+++.++|.++++.
T Consensus 160 -~~~~~~l~~~i~~~l~~ 176 (196)
T d2bfwa1 160 -AGDPGELANAILKALEL 176 (196)
T ss_dssp -TTCHHHHHHHHHHHHHC
T ss_pred -CCCHHHHHHHHHHHHhC
Confidence 45789999999998863
|
| >d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Prephenate dehydrogenase TyrA species: Haemophilus influenzae [TaxId: 727]
Probab=93.64 E-value=0.1 Score=40.80 Aligned_cols=101 Identities=10% Similarity=0.021 Sum_probs=59.6
Q ss_pred CCCCccEEEEEc-CCCCCChHHHHHHHHHHHhCCCeEEEEeCCCChhhhhhhccCCCCCCeeEEEcCCCCCCCCCChhhH
Q 042753 1 MLPAGAHILVYP-FPTSGHIIPLLDLTNRLLTLGLNVTVLITQNNLPLLDSLNANHPSTSLQSLVLPQPKWPAGSPATRL 79 (473)
Q Consensus 1 ~~~~~~~Il~~~-~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~i~~~~~~~~~~~~~f~~l~~~~~~~~~~~~~~ 79 (473)
|+++|+||+++- .+..| ..+|+.|.++||+|+..........-... .+..+..+..+ ..
T Consensus 5 ~~~~~~kI~iIGg~G~mG-----~~la~~L~~~G~~V~~~d~~~~~~~~~~~------~~~~~v~~~~~------~~--- 64 (152)
T d2pv7a2 5 INSDIHKIVIVGGYGKLG-----GLFARYLRASGYPISILDREDWAVAESIL------ANADVVIVSVP------IN--- 64 (152)
T ss_dssp SCTTCCCEEEETTTSHHH-----HHHHHHHHTTTCCEEEECTTCGGGHHHHH------TTCSEEEECSC------GG---
T ss_pred cCCCCCeEEEEcCCCHHH-----HHHHHHHHHcCCCcEecccccccccchhh------hhccccccccc------hh---
Confidence 678999999987 44444 46899999999999998776543222111 12333333211 11
Q ss_pred HHHHHHHHHHhhHHHHHHHhcCCCCCcEEEeCCCcch---HHHHHHHhCCCcEEEe
Q 042753 80 LKFMRVLRELHYPALLDWFKSHPSPPVAILSDFFLGW---TQGLAAELGLPRVVFS 132 (473)
Q Consensus 80 ~~~~~~~~~~~~~~l~~~l~~~~~~pD~VV~D~~~~~---~~~~A~~~giP~v~~~ 132 (473)
.....+.+++... +++.+|+|..+.- ...+.+.+...++..+
T Consensus 65 ---------~~~~v~~~~~~~~--~~~~iiiD~~Svk~~~~~~~~~~~~~~~v~~h 109 (152)
T d2pv7a2 65 ---------LTLETIERLKPYL--TENMLLADLTSVKREPLAKMLEVHTGAVLGLH 109 (152)
T ss_dssp ---------GHHHHHHHHGGGC--CTTSEEEECCSCCHHHHHHHHHHCSSEEEEEE
T ss_pred ---------hheeeeecccccc--cCCceEEEecccCHHHHHHHHHHccCCEEEec
Confidence 1223344555666 7888999988652 2344444544444433
|
| >d1uqta_ c.87.1.6 (A:) Trehalose-6-phosphate synthase, OtsA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Trehalose-6-phosphate synthase, OtsA domain: Trehalose-6-phosphate synthase, OtsA species: Escherichia coli [TaxId: 562]
Probab=89.22 E-value=1.4 Score=40.97 Aligned_cols=113 Identities=19% Similarity=0.145 Sum_probs=68.3
Q ss_pred eEeecCccHHH---hhhccCccceee--ccCch-hHHHHHhhCCeEecCc-ccccchhhHHHHHHHhcceEEeccCCCCC
Q 042753 337 YVIRGWSQQVA---ILRHKAVGAFLT--HCGWN-SVLEGVSAGVVMLTWP-MDADQYTNAQLLVDQLGVGIRVGEGTRNI 409 (473)
Q Consensus 337 v~v~~~~pq~~---lL~~~~v~~~It--HgG~~-s~~eal~~GvP~l~~P-~~~DQ~~na~rv~~~~G~G~~l~~~~~~~ 409 (473)
+.+...+++.+ ++..+++ +++| .-|+| +.+|++++|+|...-+ +..|--..+..+ +-|+.++ .
T Consensus 333 v~~~~~~~~~~l~a~~~~Adv-~v~~s~~EG~~lv~~Ea~a~~~p~~~g~lIlS~~~G~~~~l----~~g~lVn-----P 402 (456)
T d1uqta_ 333 YYLNQHFDRKLLMKIFRYSDV-GLVTPLRDGMNLVAKEYVAAQDPANPGVLVLSQFAGAANEL----TSALIVN-----P 402 (456)
T ss_dssp EEECSCCCHHHHHHHHHHCSE-EEECCSSBSCCHHHHHHHHHSCTTSCCEEEEETTBGGGGTC----TTSEEEC-----T
T ss_pred eeccCCcCHHHHhHHHhhhce-eecCCccCCCCcHHHHHHHhCCCCCCCcEEEeCCCCCHHHh----CCeEEEC-----c
Confidence 45556666655 4566776 3333 35555 7899999999931111 112222222222 3377777 4
Q ss_pred CCHHHHHHHHHHHhCCc-HHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHhh
Q 042753 410 PESDELARLLAQSVDGP-RRERLKARELSGAALSAVVKGGSSDRDLNDFIKRINEL 464 (473)
Q Consensus 410 ~~~~~l~~~i~~~l~~~-~~~~~~a~~~~~~~~~~~~~~gs~~~~~~~~~~~~~~~ 464 (473)
.+.++++++|.++|+.+ +.-+++.+++.+.++ . -+.+.=.+.+++.+++.
T Consensus 403 ~d~~~~A~ai~~aL~~~~~er~~~~~~~~~~v~----~-~~~~~W~~~fl~~l~~~ 453 (456)
T d1uqta_ 403 YDRDEVAAALDRALTMSLAERISRHAEMLDVIV----K-NDINHWQECFISDLKQI 453 (456)
T ss_dssp TCHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHH----H-TCHHHHHHHHHHHHHHS
T ss_pred CCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH----H-CCHHHHHHHHHHHHHhh
Confidence 58999999999999865 334444555555553 2 34666778888887763
|
| >d1j9ja_ c.106.1.1 (A:) SurE homolog TM1662 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: SurE-like superfamily: SurE-like family: SurE-like domain: SurE homolog TM1662 species: Thermotoga maritima [TaxId: 2336]
Probab=87.21 E-value=0.97 Score=38.15 Aligned_cols=110 Identities=15% Similarity=-0.011 Sum_probs=57.4
Q ss_pred cEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCCCChhhhhhhccCCCCCCeeEEEcCCCC------CCCCCChhhH
Q 042753 6 AHILVYPFPTSGHIIPLLDLTNRLLTLGLNVTVLITQNNLPLLDSLNANHPSTSLQSLVLPQPK------WPAGSPATRL 79 (473)
Q Consensus 6 ~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~i~~~~~~~~~~~~~f~~l~~~~------~~~~~~~~~~ 79 (473)
||||+.-==|. |---+..|+++| ++||+|+++.+...+.-...++. ....+++..+.... .++-| .
T Consensus 1 M~ILltNDDGi-~s~gl~~L~~~l-~~~~~V~vvAP~~~~S~~g~ait--~~~~l~~~~~~~~~~~~~~~v~GTP-a--- 72 (247)
T d1j9ja_ 1 MRILVTNDDGI-QSKGIIVLAELL-SEEHEVFVVAPDKERSATGHSIT--IHVPLWMKKVFISERVVAYSTTGTP-A--- 72 (247)
T ss_dssp CEEEEECSSCT-TCHHHHHHHHHH-TTTSEEEEEEESSCCTTCTTCCC--CSSCCCEEECCCSSSEEEEEESSCH-H---
T ss_pred CeEEEEcCCCC-CChHHHHHHHHH-hcCCeEEEEecCCCCcCCccccc--CCCCcceEEeecCCCceEEEeCCch-H---
Confidence 46766653222 222256677777 56999999999866544333321 11124444433211 01111 1
Q ss_pred HHHHHHHHHHhhHHHHHHHhcCCCCCcEEEe----------CCCcc---hHHHHHHHhCCCcEEEecc
Q 042753 80 LKFMRVLRELHYPALLDWFKSHPSPPVAILS----------DFFLG---WTQGLAAELGLPRVVFSPS 134 (473)
Q Consensus 80 ~~~~~~~~~~~~~~l~~~l~~~~~~pD~VV~----------D~~~~---~~~~~A~~~giP~v~~~~~ 134 (473)
- ...-.+.. +... +||+||+ |.+.+ .++.-|..+|||.|.++-.
T Consensus 73 --D------cv~~al~~-l~~~--~pDlVvSGIN~G~N~g~dv~ySGTVgAA~ea~~~gipsiA~S~~ 129 (247)
T d1j9ja_ 73 --D------CVKLAYNV-VMDK--RVDLIVSGVNRGPNMGMDILHSGTVSGAMEGAMMNIPSIAISSA 129 (247)
T ss_dssp --H------HHHHHHHT-TSTT--CCSEEEEEEEESCCCGGGGGGCHHHHHHHHHHHTTCCEEEEEES
T ss_pred --H------HHHHhhhh-cccC--cccEEEecccCCCccchhhhhHHHHHHHHHHHhcCCCcceehhh
Confidence 0 01112222 2234 8999996 33444 3455567789999998643
|
| >d1p3da1 c.5.1.1 (A:11-106) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: MurCD N-terminal domain superfamily: MurCD N-terminal domain family: MurCD N-terminal domain domain: UDP-N-acetylmuramate-alanine ligase MurC species: Haemophilus influenzae [TaxId: 727]
Probab=86.79 E-value=0.37 Score=34.09 Aligned_cols=86 Identities=8% Similarity=0.095 Sum_probs=56.3
Q ss_pred CccEEEEEcCCCCCChHHHHHHHHHHHhCCCeEEEEeCCCChhhhhhhccCCCCCCeeEEEcCCCCCCCCCChhhHHHHH
Q 042753 4 AGAHILVYPFPTSGHIIPLLDLTNRLLTLGLNVTVLITQNNLPLLDSLNANHPSTSLQSLVLPQPKWPAGSPATRLLKFM 83 (473)
Q Consensus 4 ~~~~Il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~i~~~~~~~~~~~~~f~~l~~~~~~~~~~~~~~~~~~ 83 (473)
+++||-|+-.++.| |-+||+.|+++||+|+-.=...+ ..++.... .++.+.. ....
T Consensus 7 ~~~~ihfiGigG~G----Ms~LA~~L~~~G~~VsGSD~~~~-~~~~~L~~----~Gi~v~~-g~~~-------------- 62 (96)
T d1p3da1 7 RVQQIHFIGIGGAG----MSGIAEILLNEGYQISGSDIADG-VVTQRLAQ----AGAKIYI-GHAE-------------- 62 (96)
T ss_dssp TCCEEEEETTTSTT----HHHHHHHHHHHTCEEEEEESCCS-HHHHHHHH----TTCEEEE-SCCG--------------
T ss_pred hCCEEEEEEECHHH----HHHHHHHHHhCCCEEEEEeCCCC-hhhhHHHH----CCCeEEE-CCcc--------------
Confidence 36899999999888 68899999999999986543322 22222211 2555432 2100
Q ss_pred HHHHHHhhHHHHHHHhcCCCCCcEEEeCCCcch---HHHHHHHhCCCcE
Q 042753 84 RVLRELHYPALLDWFKSHPSPPVAILSDFFLGW---TQGLAAELGLPRV 129 (473)
Q Consensus 84 ~~~~~~~~~~l~~~l~~~~~~pD~VV~D~~~~~---~~~~A~~~giP~v 129 (473)
+.+ . ..|+||+...... -+..|++.|||++
T Consensus 63 ------------~~i--~--~~d~vV~S~AI~~~npel~~A~~~gipii 95 (96)
T d1p3da1 63 ------------EHI--E--GASVVVVSSAIKDDNPELVTSKQKRIPVI 95 (96)
T ss_dssp ------------GGG--T--TCSEEEECTTSCTTCHHHHHHHHTTCCEE
T ss_pred ------------ccC--C--CCCEEEECCCcCCCCHHHHHHHHcCCCEE
Confidence 012 2 5699998877653 3788999999986
|
| >d3clsd1 c.26.2.3 (D:1-192) Large, alpha subunit of electron transfer flavoprotein ETFP, N-terminal domain {Methylophilus methylotrophus [TaxId: 17]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Adenine nucleotide alpha hydrolase-like superfamily: Adenine nucleotide alpha hydrolases-like family: ETFP subunits domain: Large, alpha subunit of electron transfer flavoprotein ETFP, N-terminal domain species: Methylophilus methylotrophus [TaxId: 17]
Probab=80.28 E-value=2.1 Score=34.29 Aligned_cols=111 Identities=15% Similarity=0.149 Sum_probs=68.6
Q ss_pred cEEEEEcCCCCCChHH----HHHHHHHHHhC-CCeEEEEeCCCChhhhhhhccCCCCCCee-EEEcCCCCCCCCCChhhH
Q 042753 6 AHILVYPFPTSGHIIP----LLDLTNRLLTL-GLNVTVLITQNNLPLLDSLNANHPSTSLQ-SLVLPQPKWPAGSPATRL 79 (473)
Q Consensus 6 ~~Il~~~~~~~GH~~p----~l~La~~L~~r-Gh~Vt~~~~~~~~~~i~~~~~~~~~~~~~-f~~l~~~~~~~~~~~~~~ 79 (473)
+||+++.-...|.+.+ ++..|+.|.+. |.+|+.++.....+........ .+.+ ...+..+.. .+.+
T Consensus 1 skIlV~~E~~~g~l~~~slEll~~A~~la~~~g~~v~avv~G~~~~~~~~~l~~---~Ga~~v~~~~~~~~-~~~~---- 72 (192)
T d3clsd1 1 SKILVIAEHRRNDLRPVSLELIGAANGLKKSGEDKVVVAVIGSQADAFVPALSV---NGVDELVVVKGSSI-DFDP---- 72 (192)
T ss_dssp CEEEEECCEETTEECTHHHHHHHHHHHHCSSTTCEEEEEEESTTGGGGHHHHCB---TTCSEEEEEECSCS-SCCH----
T ss_pred CeEEEEEEccCCEECHHHHHHHHHHHHHHHhcCCcEEEEEeCCchHHHHhhhhh---cCceEEEEecCccc-ccCH----
Confidence 4788777655666644 67889999875 8899888876554433322211 1222 222222111 1111
Q ss_pred HHHHHHHHHHhhHHHHHHHhcCCCCCcEEEeCCCcc---hHHHHHHHhCCCcEEEecc
Q 042753 80 LKFMRVLRELHYPALLDWFKSHPSPPVAILSDFFLG---WTQGLAAELGLPRVVFSPS 134 (473)
Q Consensus 80 ~~~~~~~~~~~~~~l~~~l~~~~~~pD~VV~D~~~~---~~~~~A~~~giP~v~~~~~ 134 (473)
. .....+.++++.. +||+|+...... .+..+|.++|.|++.-+..
T Consensus 73 -------~-~~~~al~~~~~~~--~p~~Vl~~~t~~grdlaprlAa~L~~~~vsdv~~ 120 (192)
T d3clsd1 73 -------D-VFEASVSALIAAH--NPSVVLLPHSVDSLGYASSLASKTGYGFATDVYI 120 (192)
T ss_dssp -------H-HHHHHHHHHHHHH--CCSEEEEESSHHHHTTHHHHHHHSSCEEEEEECE
T ss_pred -------H-HHHHHHHHHHhhc--ccceEEecCChhHHHHHHHHHHhhCcCeecceEE
Confidence 1 3345567778888 999999886644 4678999999999886554
|