Citrus Sinensis ID: 042838
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 162 | ||||||
| 255545828 | 694 | kinase, putative [Ricinus communis] gi|2 | 0.913 | 0.213 | 0.496 | 3e-27 | |
| 255545824 | 727 | kinase, putative [Ricinus communis] gi|2 | 0.858 | 0.191 | 0.434 | 1e-21 | |
| 147765961 | 679 | hypothetical protein VITISV_007744 [Viti | 0.845 | 0.201 | 0.414 | 2e-17 | |
| 359475622 | 867 | PREDICTED: wall-associated receptor kina | 0.716 | 0.133 | 0.451 | 6e-16 | |
| 296085615 | 597 | unnamed protein product [Vitis vinifera] | 0.716 | 0.194 | 0.451 | 8e-16 | |
| 359475620 | 822 | PREDICTED: wall-associated receptor kina | 0.876 | 0.172 | 0.427 | 2e-14 | |
| 296085612 | 392 | unnamed protein product [Vitis vinifera] | 0.876 | 0.362 | 0.427 | 3e-14 | |
| 224148260 | 637 | predicted protein [Populus trichocarpa] | 0.728 | 0.185 | 0.412 | 2e-13 | |
| 224072761 | 303 | predicted protein [Populus trichocarpa] | 0.796 | 0.425 | 0.402 | 3e-13 | |
| 147835050 | 726 | hypothetical protein VITISV_006595 [Viti | 0.833 | 0.185 | 0.352 | 5e-13 |
| >gi|255545828|ref|XP_002513974.1| kinase, putative [Ricinus communis] gi|223547060|gb|EEF48557.1| kinase, putative [Ricinus communis] | Back alignment and taxonomy information |
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Score = 126 bits (317), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 77/155 (49%), Positives = 99/155 (63%), Gaps = 7/155 (4%)
Query: 1 MFLPLWPIKA-SKDLCQYDCGNATIRYPFGIGEGCYFDKSFEVICDYSSGSPKAFLASIN 59
+FL LW +A S + C+ CGN I +PFGIG+GCY D+SFEV C+ SS PK FL SI
Sbjct: 17 LFLILWLAQARSVEPCESYCGNVPIEFPFGIGKGCYMDESFEVTCNSSSEPPKPFLTSI- 75
Query: 60 NLQVLDNHVYGVSNIRVNIPVISLKSSNLTSNAEGVSLSVSPFTFSPWDNRFTAIGCNNY 119
N+++L+ V + ++VN PVI S+ TS A VSLS +PFTFS NRFTA GCNNY
Sbjct: 76 NMELLE--VLSPNQVQVNNPVIYSNCSHKTSTASRVSLSGTPFTFSNASNRFTAKGCNNY 133
Query: 120 TTIIKRQNDSSVFGGCLSISTCDPALNPGCYDFLC 154
+++ D+ GGCLSI D A + GCY C
Sbjct: 134 AILMQDIGDT--VGGCLSICR-DEANSSGCYGINC 165
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Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255545824|ref|XP_002513972.1| kinase, putative [Ricinus communis] gi|223547058|gb|EEF48555.1| kinase, putative [Ricinus communis] | Back alignment and taxonomy information |
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| >gi|147765961|emb|CAN70207.1| hypothetical protein VITISV_007744 [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|359475622|ref|XP_003631717.1| PREDICTED: wall-associated receptor kinase-like 10-like, partial [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|296085615|emb|CBI29390.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|359475620|ref|XP_002266785.2| PREDICTED: wall-associated receptor kinase-like 1-like [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|296085612|emb|CBI29387.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|224148260|ref|XP_002336622.1| predicted protein [Populus trichocarpa] gi|222836363|gb|EEE74770.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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| >gi|224072761|ref|XP_002303868.1| predicted protein [Populus trichocarpa] gi|222841300|gb|EEE78847.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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| >gi|147835050|emb|CAN76906.1| hypothetical protein VITISV_006595 [Vitis vinifera] | Back alignment and taxonomy information |
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Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 162 | ||||||
| TAIR|locus:2200492 | 317 | WAKL7 "wall associated kinase- | 0.814 | 0.416 | 0.372 | 4.1e-17 | |
| TAIR|locus:2014962 | 733 | WAK5 "wall associated kinase 5 | 0.827 | 0.182 | 0.331 | 5.1e-12 | |
| TAIR|locus:2014912 | 732 | WAK2 "wall-associated kinase 2 | 0.820 | 0.181 | 0.304 | 2.9e-11 | |
| TAIR|locus:2030988 | 764 | AT1G17910 [Arabidopsis thalian | 0.771 | 0.163 | 0.360 | 5e-11 | |
| TAIR|locus:2126316 | 786 | AT4G31100 [Arabidopsis thalian | 0.716 | 0.147 | 0.359 | 5.2e-11 | |
| TAIR|locus:2205040 | 792 | AT1G69730 [Arabidopsis thalian | 0.839 | 0.171 | 0.348 | 1.1e-10 | |
| TAIR|locus:2032875 | 720 | AT1G16260 [Arabidopsis thalian | 0.635 | 0.143 | 0.342 | 1.2e-10 | |
| TAIR|locus:2014897 | 741 | WAK3 "wall associated kinase 3 | 0.845 | 0.184 | 0.315 | 1.3e-10 | |
| TAIR|locus:2200552 | 730 | WAKL1 "wall associated kinase- | 0.796 | 0.176 | 0.331 | 2.4e-10 | |
| TAIR|locus:2200527 | 642 | WAKL6 "wall associated kinase- | 0.895 | 0.225 | 0.293 | 4.6e-10 |
| TAIR|locus:2200492 WAKL7 "wall associated kinase-like 7" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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Score = 210 (79.0 bits), Expect = 4.1e-17, P = 4.1e-17
Identities = 57/153 (37%), Positives = 82/153 (53%)
Query: 15 CQYDCGNATIRYPFGIGEGCYFDKS--FEVICDYSSGSPKAFLASIN----NLQVLDNH- 67
CQ CG I YPFGIG+ CY + + +EVIC+ +SG+P L SIN N+ + D+
Sbjct: 36 CQSHCGGIAIPYPFGIGKDCYLNNNEWYEVICNRTSGNPLPVLKSINRELVNISLPDDSS 95
Query: 68 -VYGVSNIRVNIPVISLKSSNLTSNAEGVSLSVSPFTFSPWDNRFTAIGCNNYTTIIKRQ 126
V+G++ I+ N PV SL SN+ + ++++ SPF F N A+GCNN ++
Sbjct: 96 DVFGLTRIK-N-PVTSLGCSNMEEISLALNVTGSPF-FLTGRNTLVAVGCNNNASMT--- 149
Query: 127 NDSSVFGGCLSISTCDPAL-----NPGCYDFLC 154
+D GGC S TCD N C + C
Sbjct: 150 DDKLQIGGCES--TCDVGFGQRGRNRSCNGYRC 180
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| TAIR|locus:2014962 WAK5 "wall associated kinase 5" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2014912 WAK2 "wall-associated kinase 2" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2030988 AT1G17910 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2126316 AT4G31100 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2205040 AT1G69730 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2032875 AT1G16260 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2014897 WAK3 "wall associated kinase 3" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2200552 WAKL1 "wall associated kinase-like 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2200527 WAKL6 "wall associated kinase-like 6" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 162 | |||
| pfam13947 | 106 | pfam13947, GUB_WAK_bind, Wall-associated receptor | 4e-24 |
| >gnl|CDD|222467 pfam13947, GUB_WAK_bind, Wall-associated receptor kinase galacturonan-binding | Back alignment and domain information |
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Score = 90.0 bits (224), Expect = 4e-24
Identities = 39/106 (36%), Positives = 56/106 (52%), Gaps = 5/106 (4%)
Query: 15 CQYDCGNATIRYPFGIGEGCYFDKSFEVICDYSSGSPKAFLASINNLQVLD-NHVYGVSN 73
C CGN +I YPFGIG GC D FE+ C+ ++ P+ L + N +VL + G
Sbjct: 4 CPDRCGNVSIPYPFGIGPGCARDPGFELTCNNTTSPPRLLLGNG-NYEVLSISLANGT-- 60
Query: 74 IRVNIPVISLKSSNLTSNAEGVSLSV-SPFTFSPWDNRFTAIGCNN 118
+RV P+ S ++ + SLS+ PF FS N+F +GCN
Sbjct: 61 VRVLDPISSNCYNSSGKRTDNGSLSLGGPFFFSSSRNKFVVVGCNT 106
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This cysteine-rich GUB_WAK_bind domain is the extracellular part of this serine/threonine kinase that binds to the cell-wall pectins. Length = 106 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 162 | |||
| PF13947 | 106 | GUB_WAK_bind: Wall-associated receptor kinase gala | 99.97 |
| >PF13947 GUB_WAK_bind: Wall-associated receptor kinase galacturonan-binding | Back alignment and domain information |
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Probab=99.97 E-value=9.7e-32 Score=193.20 Aligned_cols=103 Identities=42% Similarity=0.729 Sum_probs=88.9
Q ss_pred CCcccCCcCCeeeccCCCCCCCCCCCCCCeEEecCCCCCCeeeeecccceEEEEeeecCccceeeeeceecccCCCCCCC
Q 042838 12 KDLCQYDCGNATIRYPFGIGEGCYFDKSFEVICDYSSGSPKAFLASINNLQVLDNHVYGVSNIRVNIPVISLKSSNLTSN 91 (162)
Q Consensus 12 ~~~C~~~CGnv~IpYPFGig~~C~~~~gF~l~C~~~~~~p~l~l~~~~~~~V~~Is~~~~~~v~v~~~~~~~~C~~~~~~ 91 (162)
+++||++||||+||||||++++|++.++|+|+|++++++|+|++.+. .|||++|+++ +++++|.+++ ++.|+.....
T Consensus 1 ~~~C~~~CGnv~IpYPFgi~~~C~~~~~F~L~C~~~~~~~~l~l~~~-~~~V~~I~~~-~~~i~v~~~~-~~~~~~~~~~ 77 (106)
T PF13947_consen 1 KPGCPSSCGNVSIPYPFGIGPGCGRDPGFELTCNNNTSPPKLLLSSG-NYEVLSISYE-NGTIRVSDPI-SSNCYSSSSS 77 (106)
T ss_pred CCCCCCccCCEeecCCCccCCCCCCCCCcEEECCCCCCCceeEecCC-cEEEEEEecC-CCEEEEEecc-ccceecCCCC
Confidence 68999999999999999999999995599999998877889999765 8999999999 9999999999 7777765443
Q ss_pred c---cccccCCCCeEecCCCCEEEEEccCc
Q 042838 92 A---EGVSLSVSPFTFSPWDNRFTAIGCNN 118 (162)
Q Consensus 92 ~---~~~~l~~~pF~~S~~~N~f~~~GC~~ 118 (162)
. .++++.+ ||.+|+.+|+|+++||++
T Consensus 78 ~~~~~~~~~~~-~~~~s~~~N~~~~~GC~t 106 (106)
T PF13947_consen 78 NSSNSNLSLNG-PFFFSSSSNKFTVVGCNT 106 (106)
T ss_pred cccccEEeecC-CceEccCCcEEEEECCCC
Confidence 2 2445544 899999999999999985
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Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 162 | |||
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 4e-04 |
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
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Score = 38.7 bits (89), Expect = 4e-04
Identities = 36/194 (18%), Positives = 53/194 (27%), Gaps = 81/194 (41%)
Query: 34 CY-FDKSFEVICDYSSGSP----------KAFLAS---INNLQVLDNHVY---------- 69
Y D ++ D+SS + L S N L VL N V
Sbjct: 206 LYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLN-VQNAKAWNAFNL 264
Query: 70 ---------------GVSNIRVNIPVISLKSSNLTSNAEGVSL----------------- 97
+S + S LT E SL
Sbjct: 265 SCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTP-DEVKSLLLKYLDCRPQDLPREVL 323
Query: 98 SVSPFTFS-----------PWDNRFTAIGCNNYTTIIKRQNDSSVFGGCLSISTCDPALN 146
+ +P S WDN + + C+ TTII+ S++ +PA
Sbjct: 324 TTNPRRLSIIAESIRDGLATWDN-WKHVNCDKLTTIIE-----------SSLNVLEPAEY 371
Query: 147 PGCYDFLCALPQNI 160
+D L P +
Sbjct: 372 RKMFDRLSVFPPSA 385
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Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
No hit with probability above 80.00
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
No hit with probability above 80.00