Citrus Sinensis ID: 042839


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------
MDLGVGSFVFANAIVSRQARNIQSMNWKSALKSTGPLILLGFGRIVSTTGVDYQVHVGEYGVHWNFFFTLAAVSILTSIINIRPKYCGILGSVILIGYQSWLIRGLNVYLLSNERGTDIISQNKEGIFSIFGYWGLYLVGVQLGHYIFFGNNSQSASRSNKAAFIKTWLLGILTGLLTLLLDRHIERVSRRMCNLAYVTWIASLNLQ
ccccHHHHHHccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccHHHHHHHHHHHHHHHccEEccccccccccccHHHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHccc
ccccHHHHHHHHHHcccHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHccHcHHHHHHHHHHHHHHHHHHcccHHHEEcccccccHHHHcHHHHHHHHHHHHHHHHHHHHccEEccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHcHHHHHHHHHHHcc
MDLGVGSFVFANAIVSRQARNIQSMNWKsalkstgplillgfgrivsttgVDYQVHVGEYGVHWNFFFTLAAVSILTSIINIRPKYCGILGSVILIGYQSWLIRGLNVYllsnergtdiisQNKEGIFSIFGYWGLYLVGVQLGHYIffgnnsqsasrsnKAAFIKTWLLGILTGLLTLLLDRHIERVSRRMCNLAYVTWIASLNLQ
MDLGVGSFVFANAIVSRQARNIQSMNWKSALKSTGPLILLGFGRIVSTTGVDYQVHVGEYGVHWNFFFTLAAVSILTSIINIRPKYCGILGSVILIGYQSWLIRGLNVYLLSNERGTDIISQNKEGIFSIFGYWGLYLVGVQLGHYIFFGNNSQSASRSNKAAFIKTWLLGILTGLLTLLLDRHIERVSRRMCNLAYVTWIASLNLQ
MDLGVGSFVFANAIVSRQARNIQSMNWKSALKSTGPLILLGFGRIVSTTGVDYQVHVGEYGVHWNFFFTLAAVSILTSIINIRPKYCGILGSVILIGYQSWLIRGLNVYLLSNERGTDIISQNKEGIFSIFGYWGLYLVGVQLGHYIFFGNNSQSASRSNKAAFIKTWllgiltglltlllDRHIERVSRRMCNLAYVTWIASLNLQ
****VGSFVFANAIVSRQARNIQSMNWKSALKSTGPLILLGFGRIVSTTGVDYQVHVGEYGVHWNFFFTLAAVSILTSIINIRPKYCGILGSVILIGYQSWLIRGLNVYLLSNERGTDIISQNKEGIFSIFGYWGLYLVGVQLGHYIFFGNN********KAAFIKTWLLGILTGLLTLLLDRHIERVSRRMCNLAYVTWIASL***
MDLGVGSFVFANAIVSRQAR*****NWKSALKSTGPLILLGFGRIVSTTGVDYQVHVGEYGVHWNFFFTLAAVSILTSIINIRPKYCGILGSVILIGYQSWLIRGLNVYLLSNERGTDIISQNKEGIFSIFGYWGLYLVGVQLGHYIFFGNN*****RSNKAAFIKTWLLGILTGLLTLLLDRHIERVSRRMCNLAYVTWIASLNLQ
MDLGVGSFVFANAIVSRQARNIQSMNWKSALKSTGPLILLGFGRIVSTTGVDYQVHVGEYGVHWNFFFTLAAVSILTSIINIRPKYCGILGSVILIGYQSWLIRGLNVYLLSNERGTDIISQNKEGIFSIFGYWGLYLVGVQLGHYIFFGNNSQSASRSNKAAFIKTWLLGILTGLLTLLLDRHIERVSRRMCNLAYVTWIASLNLQ
*DLGVGSFVFANAIVSRQARNIQSMNWKSALKSTGPLILLGFGRIVSTTGVDYQVHVGEYGVHWNFFFTLAAVSILTSIINIRPKYCGILGSVILIGYQSWLIRGLNVYLLSNERGTDIISQNKEGIFSIFGYWGLYLVGVQLGHYIFFGNNSQSASRSNKAAFIKTWLLGILTGLLTLLLDRHIERVSRRMCNLAYVTWIASLNLQ
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiii
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHHHiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHooooooooooooHHHHHHHHHHHHHHHHiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooo
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MDLGVGSFVFANAIVSRQARNIQSMNWKSALKSTGPLILLGFGRIVSTTGVDYQVHVGEYGVHWNFFFTLAAVSILTSIINIRPKYCGILGSVILIGYQSWLIRGLNVYLLSNERGTDIISQNKEGIFSIFGYWGLYLVGVQLGHYIFFGNNSQSASRSNKAAFIKTWLLGILTGLLTLLLDRHIERVSRRMCNLAYVTWIASLNLQ
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query207 2.2.26 [Sep-21-2011]
B3H6K1434 Uncharacterized protein A yes no 0.990 0.472 0.608 2e-74
Q54MC0492 Phosphatidylinositol-glyc yes no 0.975 0.410 0.348 2e-28
Q2UQH4500 GPI-anchored wall transfe yes no 0.975 0.404 0.386 3e-28
Q4IQ08501 GPI-anchored wall transfe yes no 0.980 0.405 0.369 4e-28
Q6CK18446 GPI-anchored wall transfe yes no 0.951 0.441 0.396 3e-27
Q6CAW6478 GPI-anchored wall transfe yes no 0.985 0.426 0.361 3e-27
Q7SCL1504 GPI-anchored wall transfe N/A no 0.966 0.396 0.357 6e-27
Q5BF53 474 GPI-anchored wall transfe yes no 0.922 0.402 0.339 2e-26
Q6BTT3493 GPI-anchored wall transfe yes no 0.980 0.411 0.323 5e-25
Q7TSN4 502 Phosphatidylinositol-glyc yes no 0.942 0.388 0.35 9e-25
>sp|B3H6K1|Y4791_ARATH Uncharacterized protein At4g17910 OS=Arabidopsis thaliana GN=At4g17910 PE=2 SV=2 Back     alignment and function desciption
 Score =  278 bits (710), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 126/207 (60%), Positives = 169/207 (81%), Gaps = 2/207 (0%)

Query: 1   MDLGVGSFVFANAIVSRQARNIQSMNWKSALKSTGPLILLGFGRIVSTTGVDYQVHVGEY 60
           MDLGVGSFV ANA+VSRQAR++ S NW + +K+T PL+LLGF R+V+T+GVDYQVHV EY
Sbjct: 147 MDLGVGSFVLANAVVSRQARDVSSGNWITGIKATAPLLLLGFIRLVTTSGVDYQVHVTEY 206

Query: 61  GVHWNFFFTLAAVSILTSIINIRPKYCGILGSVILIGYQSWLIRGLNVYLLSNERGTDII 120
           GVHWNFFFTLAA+SILTS +NI  KYCG+LG  +L GYQ+WL+ GLN YLLS+ERGTDII
Sbjct: 207 GVHWNFFFTLAAISILTSFVNIPAKYCGLLGFAVLAGYQTWLLSGLNTYLLSDERGTDII 266

Query: 121 SQNKEGIFSIFGYWGLYLVGVQLGHYIFFGNNSQSASRSNKAAFIKTWLLGILTGLLTLL 180
           S+NKEG++SI GYWG+YL+GV LG+ +F+G ++    RS  ++  + +L+ +L  ++T+L
Sbjct: 267 SKNKEGVYSILGYWGMYLLGVHLGYRLFYGKHTN--IRSTTSSIARVFLVSLLLWIVTIL 324

Query: 181 LDRHIERVSRRMCNLAYVTWIASLNLQ 207
            D ++ER+SRR CN+ YVTW+ + +LQ
Sbjct: 325 FDNYVERISRRTCNMPYVTWVLAQDLQ 351





Arabidopsis thaliana (taxid: 3702)
>sp|Q54MC0|PIGW_DICDI Phosphatidylinositol-glycan biosynthesis class W protein OS=Dictyostelium discoideum GN=pigw PE=3 SV=2 Back     alignment and function description
>sp|Q2UQH4|GWT1_ASPOR GPI-anchored wall transfer protein 1 OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) GN=gwt1 PE=3 SV=1 Back     alignment and function description
>sp|Q4IQ08|GWT1_GIBZE GPI-anchored wall transfer protein 1 OS=Gibberella zeae (strain PH-1 / ATCC MYA-4620 / FGSC 9075 / NRRL 31084) GN=GWT1 PE=3 SV=1 Back     alignment and function description
>sp|Q6CK18|GWT1_KLULA GPI-anchored wall transfer protein 1 OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=GWT1 PE=3 SV=1 Back     alignment and function description
>sp|Q6CAW6|GWT1_YARLI GPI-anchored wall transfer protein 1 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=GWT1 PE=3 SV=1 Back     alignment and function description
>sp|Q7SCL1|GWT1_NEUCR GPI-anchored wall transfer protein 1 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=gwt-1 PE=3 SV=1 Back     alignment and function description
>sp|Q5BF53|GWT1_EMENI GPI-anchored wall transfer protein 1 OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=gwt1 PE=3 SV=1 Back     alignment and function description
>sp|Q6BTT3|GWT1_DEBHA GPI-anchored wall transfer protein 1 OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968) GN=GWT1 PE=3 SV=2 Back     alignment and function description
>sp|Q7TSN4|PIGW_RAT Phosphatidylinositol-glycan biosynthesis class W protein OS=Rattus norvegicus GN=Pigw PE=1 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query207
225427179 519 PREDICTED: uncharacterized protein At4g1 1.0 0.398 0.729 4e-84
297742086 480 unnamed protein product [Vitis vinifera] 1.0 0.431 0.692 2e-81
356523876 463 PREDICTED: uncharacterized protein At4g1 0.995 0.444 0.695 2e-79
357517003 461 GPI-anchored wall transfer protein [Medi 0.995 0.446 0.671 5e-78
449462027 471 PREDICTED: uncharacterized protein At4g1 1.0 0.439 0.673 6e-78
357112043 463 PREDICTED: uncharacterized protein At4g1 0.990 0.442 0.652 2e-74
326491667 462 predicted protein [Hordeum vulgare subsp 0.990 0.443 0.642 7e-74
240255979 434 transferase [Arabidopsis thaliana] gi|37 0.990 0.472 0.608 1e-72
115453261 460 Os03g0378200 [Oryza sativa Japonica Grou 0.990 0.445 0.628 2e-72
414867009 441 TPA: hypothetical protein ZEAMMB73_35643 0.990 0.464 0.637 5e-72
>gi|225427179|ref|XP_002277863.1| PREDICTED: uncharacterized protein At4g17910-like [Vitis vinifera] Back     alignment and taxonomy information
 Score =  316 bits (809), Expect = 4e-84,   Method: Compositional matrix adjust.
 Identities = 151/207 (72%), Positives = 176/207 (85%)

Query: 1   MDLGVGSFVFANAIVSRQARNIQSMNWKSALKSTGPLILLGFGRIVSTTGVDYQVHVGEY 60
           MDLGVGSFV  NA++S QARNI SM WK+ALKST PLILLGFGR+V T GVDYQVHVGEY
Sbjct: 230 MDLGVGSFVLGNALISHQARNIASMKWKTALKSTSPLILLGFGRLVFTAGVDYQVHVGEY 289

Query: 61  GVHWNFFFTLAAVSILTSIINIRPKYCGILGSVILIGYQSWLIRGLNVYLLSNERGTDII 120
           GV WNFFFTLAAVSILT I+N+ P+YCGILGS+ILIG+QS L+ GLN+YLLS++RG D I
Sbjct: 290 GVQWNFFFTLAAVSILTPIVNLPPQYCGILGSLILIGHQSCLMNGLNMYLLSDKRGLDFI 349

Query: 121 SQNKEGIFSIFGYWGLYLVGVQLGHYIFFGNNSQSASRSNKAAFIKTWLLGILTGLLTLL 180
           SQNKEG FSIFGYWG+YL GVQLG+Y+FFGN+S +  RSNK A  + W+L +L  LLT+ 
Sbjct: 350 SQNKEGFFSIFGYWGIYLTGVQLGNYLFFGNHSTTMWRSNKWARTRVWILSLLFWLLTVF 409

Query: 181 LDRHIERVSRRMCNLAYVTWIASLNLQ 207
           LDRH+ERVSRRMCNLAYVT + + NLQ
Sbjct: 410 LDRHVERVSRRMCNLAYVTLVLAQNLQ 436




Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297742086|emb|CBI33873.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|356523876|ref|XP_003530560.1| PREDICTED: uncharacterized protein At4g17910-like [Glycine max] Back     alignment and taxonomy information
>gi|357517003|ref|XP_003628790.1| GPI-anchored wall transfer protein [Medicago truncatula] gi|355522812|gb|AET03266.1| GPI-anchored wall transfer protein [Medicago truncatula] Back     alignment and taxonomy information
>gi|449462027|ref|XP_004148743.1| PREDICTED: uncharacterized protein At4g17910-like [Cucumis sativus] gi|449515271|ref|XP_004164673.1| PREDICTED: uncharacterized protein At4g17910-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|357112043|ref|XP_003557819.1| PREDICTED: uncharacterized protein At4g17910-like [Brachypodium distachyon] Back     alignment and taxonomy information
>gi|326491667|dbj|BAJ94311.1| predicted protein [Hordeum vulgare subsp. vulgare] gi|326502334|dbj|BAJ95230.1| predicted protein [Hordeum vulgare subsp. vulgare] Back     alignment and taxonomy information
>gi|240255979|ref|NP_193525.5| transferase [Arabidopsis thaliana] gi|374095465|sp|B3H6K1.2|Y4791_ARATH RecName: Full=Uncharacterized protein At4g17910; Flags: Precursor gi|332658567|gb|AEE83967.1| transferase [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|115453261|ref|NP_001050231.1| Os03g0378200 [Oryza sativa Japonica Group] gi|108708446|gb|ABF96241.1| GWT1 family protein, expressed [Oryza sativa Japonica Group] gi|113548702|dbj|BAF12145.1| Os03g0378200 [Oryza sativa Japonica Group] gi|125544092|gb|EAY90231.1| hypothetical protein OsI_11800 [Oryza sativa Indica Group] gi|125586449|gb|EAZ27113.1| hypothetical protein OsJ_11046 [Oryza sativa Japonica Group] gi|215687203|dbj|BAG91768.1| unnamed protein product [Oryza sativa Japonica Group] Back     alignment and taxonomy information
>gi|414867009|tpg|DAA45566.1| TPA: hypothetical protein ZEAMMB73_356436 [Zea mays] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query207
TAIR|locus:2141080434 AT4G17910 [Arabidopsis thalian 0.990 0.472 0.589 1.1e-66
DICTYBASE|DDB_G0286111492 pigW "phosphatidylinositol gly 0.893 0.376 0.387 2.4e-32
ZFIN|ZDB-GENE-080204-94 490 zgc:175274 "zgc:175274" [Danio 0.951 0.402 0.384 3.4e-28
CGD|CAL0005901 485 GWT1 [Candida albicans (taxid: 0.739 0.315 0.404 3.5e-28
UNIPROTKB|Q873N2 485 GWT1 "GPI-anchored wall transf 0.739 0.315 0.404 3.5e-28
UNIPROTKB|E1BR58 497 PIGW "Uncharacterized protein" 0.956 0.398 0.345 3.1e-27
RGD|727962 502 Pigw "phosphatidylinositol gly 0.975 0.402 0.342 5.8e-25
ASPGD|ASPL0000060621 474 AN0827 [Emericella nidulans (t 0.922 0.402 0.343 1.6e-24
SGD|S000003627 490 GWT1 "Protein involved in the 0.695 0.293 0.408 1.6e-24
UNIPROTKB|F1N3J6 503 PIGW "Phosphatidylinositol-gly 0.946 0.389 0.360 1.2e-23
TAIR|locus:2141080 AT4G17910 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 678 (243.7 bits), Expect = 1.1e-66, P = 1.1e-66
 Identities = 122/207 (58%), Positives = 160/207 (77%)

Query:     1 MDLGVGSFVFANAIVSRQARNIQSMNWKSALKSTGPLILLGFGRIVSTTGVDYQVHVGEY 60
             MDLGVGSFV ANA+VSRQAR++ S NW + +K+T PL+LLGF R+V+T+GVDYQVHV EY
Sbjct:   147 MDLGVGSFVLANAVVSRQARDVSSGNWITGIKATAPLLLLGFIRLVTTSGVDYQVHVTEY 206

Query:    61 GVHWNFFFTLAAVSILTSIINIRPKYCGILGSVILIGYQSWLIRGLNVYLLSNERGTDII 120
             GVHWNFFFTLAA+SILTS +NI  KYCG+LG  +L GYQ+WL+ GLN YLLS+ERGTDII
Sbjct:   207 GVHWNFFFTLAAISILTSFVNIPAKYCGLLGFAVLAGYQTWLLSGLNTYLLSDERGTDII 266

Query:   121 SQNKEGIFSIFGYWGLYLVGVQLGHYIFFGNNSQSASRSNKAAFIKTWXXXXXXXXXXXX 180
             S+NKEG++SI GYWG+YL+GV LG+ +F+G ++    RS  ++  + +            
Sbjct:   267 SKNKEGVYSILGYWGMYLLGVHLGYRLFYGKHTNI--RSTTSSIARVFLVSLLLWIVTIL 324

Query:   181 XDRHIERVSRRMCNLAYVTWIASLNLQ 207
              D ++ER+SRR CN+ YVTW+ + +LQ
Sbjct:   325 FDNYVERISRRTCNMPYVTWVLAQDLQ 351




GO:0005739 "mitochondrion" evidence=ISM
GO:0005789 "endoplasmic reticulum membrane" evidence=IEA
GO:0006506 "GPI anchor biosynthetic process" evidence=IEA
GO:0016021 "integral to membrane" evidence=IEA
GO:0016746 "transferase activity, transferring acyl groups" evidence=IEA
DICTYBASE|DDB_G0286111 pigW "phosphatidylinositol glycan, class W" [Dictyostelium discoideum (taxid:44689)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-080204-94 zgc:175274 "zgc:175274" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
CGD|CAL0005901 GWT1 [Candida albicans (taxid:5476)] Back     alignment and assigned GO terms
UNIPROTKB|Q873N2 GWT1 "GPI-anchored wall transfer protein 1" [Candida albicans SC5314 (taxid:237561)] Back     alignment and assigned GO terms
UNIPROTKB|E1BR58 PIGW "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
RGD|727962 Pigw "phosphatidylinositol glycan anchor biosynthesis, class W" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
ASPGD|ASPL0000060621 AN0827 [Emericella nidulans (taxid:162425)] Back     alignment and assigned GO terms
SGD|S000003627 GWT1 "Protein involved in the inositol acylation of GlcN-PI" [Saccharomyces cerevisiae (taxid:4932)] Back     alignment and assigned GO terms
UNIPROTKB|F1N3J6 PIGW "Phosphatidylinositol-glycan biosynthesis class W protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Fail to connect to STRING server


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query207
COG5062429 COG5062, COG5062, Uncharacterized membrane protein 2e-35
pfam06423133 pfam06423, GWT1, GWT1 6e-21
>gnl|CDD|227394 COG5062, COG5062, Uncharacterized membrane protein [Function unknown] Back     alignment and domain information
 Score =  129 bits (325), Expect = 2e-35
 Identities = 72/207 (34%), Positives = 109/207 (52%), Gaps = 17/207 (8%)

Query: 1   MDLGVGSFVFANAIVSRQARNIQSMNWKSALKSTGPLILLGFGRIVSTTGVDYQVHVGEY 60
           MD+GVGSFV+ + IVS +A++      K  LK+   L+ LGF R  S   ++YQVHV EY
Sbjct: 152 MDIGVGSFVYNSGIVSTRAKS------KRKLKNALILLFLGFLRYFSVKLLNYQVHVREY 205

Query: 61  GVHWNFFFTLAAVSILTSIINIRPKYCGILGSVILIGYQSWLIR-GLNVYLLSNERGTDI 119
           GVHWNFFFTL  +++ +  I  R  +  +LG  I + ++  L   GL  ++ S  R + I
Sbjct: 206 GVHWNFFFTLGLLNLASLFIRTRANF--LLGFFICLTHELLLKFFGLEKFIYSAAR-SSI 262

Query: 120 ISQNKEGIFSIFGYWGLYLVGVQLGHYIFFGNNSQSASRSNKAAFIKTWLLGILTGLLTL 179
           ++ N+EGI S+  Y  ++L+G   G  +F         +  +    K  +L     L   
Sbjct: 263 LTSNREGITSLLPYISIFLMGADTGKVVF-------KKKPTRKKAWKIIILYNAFFLCVY 315

Query: 180 LLDRHIERVSRRMCNLAYVTWIASLNL 206
           L+       SRR+ NL +V WI  L+ 
Sbjct: 316 LVFNFYSTSSRRLANLPFVMWIMLLHT 342


Length = 429

>gnl|CDD|219021 pfam06423, GWT1, GWT1 Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 207
COG5062429 Uncharacterized membrane protein [Function unknown 100.0
KOG0411405 consensus Uncharacterized membrane protein [Functi 100.0
PF06423136 GWT1: GWT1; InterPro: IPR009447 Glycosylphosphatid 99.94
PF07786223 DUF1624: Protein of unknown function (DUF1624); In 96.5
>COG5062 Uncharacterized membrane protein [Function unknown] Back     alignment and domain information
Probab=100.00  E-value=8e-55  Score=390.69  Aligned_cols=189  Identities=38%  Similarity=0.646  Sum_probs=161.4

Q ss_pred             CCcchhHhhhcccccchhhhchhhhhhHHhhhhhhhHHhhhhhHhhhhccccccccccccccchHHHHHHHHHHHHHHHh
Q 042839            1 MDLGVGSFVFANAIVSRQARNIQSMNWKSALKSTGPLILLGFGRIVSTTGVDYQVHVGEYGVHWNFFFTLAAVSILTSII   80 (207)
Q Consensus         1 MDlGVGsFVfs~glVS~~ar~~~~~~~~~~lr~~~pLl~LG~~R~~~vk~~~Y~ehvtEYGvHWNFFfTLa~v~l~~~l~   80 (207)
                      ||+|||||||++|+||.|+|+      ++.+|+.+.+++||+.|.+++|.+||||||+|||+|||||||||++.+...++
T Consensus       152 MDiGVGSFvynsGivs~Raks------K~~lkn~lillflGflR~f~vk~lnyqvhvrEyGvhwNFfftLgllnl~~~fi  225 (429)
T COG5062         152 MDIGVGSFVYNSGIVSTRAKS------KRKLKNALILLFLGFLRYFSVKLLNYQVHVREYGVHWNFFFTLGLLNLASLFI  225 (429)
T ss_pred             eecccceeEeccceeecccCc------cHHHHhhhHHHHHHHHHHHHHHHhccccccHHheeehhHHHHHHHHHHHHHHh
Confidence            999999999999999998775      34688999999999999999999999999999999999999999999999998


Q ss_pred             hcCchhhHHHHHHHHHHHHHHHh-hcccccccccccccccccccchhhhhhhhHHHHHHHHHhhcceeeccCCCcccchh
Q 042839           81 NIRPKYCGILGSVILIGYQSWLI-RGLNVYLLSNERGTDIISQNKEGIFSIFGYWGLYLVGVQLGHYIFFGNNSQSASRS  159 (207)
Q Consensus        81 ~~~~~~~~~~~~~i~~~yq~~L~-~gl~~~il~~~r~~~~lsaNrEGi~S~~GY~aiyl~g~~~G~~i~~~~~~~~~~~~  159 (207)
                      +...++  .+|+.+.+.||++|. .|+++|+++|+| ++++++|||||.|++||++||++|+++|+.++++++++  .+.
T Consensus       226 r~r~nf--lLg~fi~l~he~lLkf~~l~kfi~sa~R-~~il~~NrEGI~sll~yisIfl~g~~tg~vvf~~kpTr--~~~  300 (429)
T COG5062         226 RTRANF--LLGFFICLTHELLLKFFGLEKFIYSAAR-SSILTSNREGITSLLPYISIFLMGADTGKVVFKKKPTR--KKA  300 (429)
T ss_pred             hhhHhH--HHHHHHHHHHHHHHHhccHHHhhhcCch-hhHHHhchhhhhhcchhhhheeeecccceEEecCCCch--HHH
Confidence            755554  789999999999998 699999999999 79999999999999999999999999999999987653  222


Q ss_pred             hHHHHHHHHHHHHHHHH-HHHHHhhcCCCccccccchhHHHHHHHhcC
Q 042839          160 NKAAFIKTWLLGILTGL-LTLLLDRHIERVSRRMCNLAYVTWIASLNL  206 (207)
Q Consensus       160 ~~~~~~~~~~~~~~~w~-~~~~~~~~~~~vSRRlaNl~YvlWv~a~nl  206 (207)
                      |.  .++.   ..++.. ++.+.+.+.++ |||+||+|||+||+++|.
T Consensus       301 wk--~~~~---~~af~lciylVfnf~s~s-sRRlaNlpfv~wi~~lh~  342 (429)
T COG5062         301 WK--IIIL---YNAFFLCVYLVFNFYSTS-SRRLANLPFVMWIMLLHT  342 (429)
T ss_pred             HH--HHHH---HHHHHHHHHHHHhhcccc-hhhhcCccHHHHHHHHHH
Confidence            32  2221   112222 24445666666 999999999999999984



>KOG0411 consensus Uncharacterized membrane protein [Function unknown] Back     alignment and domain information
>PF06423 GWT1: GWT1; InterPro: IPR009447 Glycosylphosphatidylinositol (GPI) is a conserved post-translational modification to anchor cell surface proteins to plasma membrane in eukaryotes Back     alignment and domain information
>PF07786 DUF1624: Protein of unknown function (DUF1624); InterPro: IPR012429 These sequences are found in hypothetical proteins of unknown function expressed by bacterial and archaeal species Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

No hit with e-value below 0.005

Structure Templates Detected by HHsearch ?

No hit with probability above 80.00


Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

No hit with probability above 80.00