Citrus Sinensis ID: 042839
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 207 | ||||||
| 225427179 | 519 | PREDICTED: uncharacterized protein At4g1 | 1.0 | 0.398 | 0.729 | 4e-84 | |
| 297742086 | 480 | unnamed protein product [Vitis vinifera] | 1.0 | 0.431 | 0.692 | 2e-81 | |
| 356523876 | 463 | PREDICTED: uncharacterized protein At4g1 | 0.995 | 0.444 | 0.695 | 2e-79 | |
| 357517003 | 461 | GPI-anchored wall transfer protein [Medi | 0.995 | 0.446 | 0.671 | 5e-78 | |
| 449462027 | 471 | PREDICTED: uncharacterized protein At4g1 | 1.0 | 0.439 | 0.673 | 6e-78 | |
| 357112043 | 463 | PREDICTED: uncharacterized protein At4g1 | 0.990 | 0.442 | 0.652 | 2e-74 | |
| 326491667 | 462 | predicted protein [Hordeum vulgare subsp | 0.990 | 0.443 | 0.642 | 7e-74 | |
| 240255979 | 434 | transferase [Arabidopsis thaliana] gi|37 | 0.990 | 0.472 | 0.608 | 1e-72 | |
| 115453261 | 460 | Os03g0378200 [Oryza sativa Japonica Grou | 0.990 | 0.445 | 0.628 | 2e-72 | |
| 414867009 | 441 | TPA: hypothetical protein ZEAMMB73_35643 | 0.990 | 0.464 | 0.637 | 5e-72 |
| >gi|225427179|ref|XP_002277863.1| PREDICTED: uncharacterized protein At4g17910-like [Vitis vinifera] | Back alignment and taxonomy information |
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Score = 316 bits (809), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 151/207 (72%), Positives = 176/207 (85%)
Query: 1 MDLGVGSFVFANAIVSRQARNIQSMNWKSALKSTGPLILLGFGRIVSTTGVDYQVHVGEY 60
MDLGVGSFV NA++S QARNI SM WK+ALKST PLILLGFGR+V T GVDYQVHVGEY
Sbjct: 230 MDLGVGSFVLGNALISHQARNIASMKWKTALKSTSPLILLGFGRLVFTAGVDYQVHVGEY 289
Query: 61 GVHWNFFFTLAAVSILTSIINIRPKYCGILGSVILIGYQSWLIRGLNVYLLSNERGTDII 120
GV WNFFFTLAAVSILT I+N+ P+YCGILGS+ILIG+QS L+ GLN+YLLS++RG D I
Sbjct: 290 GVQWNFFFTLAAVSILTPIVNLPPQYCGILGSLILIGHQSCLMNGLNMYLLSDKRGLDFI 349
Query: 121 SQNKEGIFSIFGYWGLYLVGVQLGHYIFFGNNSQSASRSNKAAFIKTWLLGILTGLLTLL 180
SQNKEG FSIFGYWG+YL GVQLG+Y+FFGN+S + RSNK A + W+L +L LLT+
Sbjct: 350 SQNKEGFFSIFGYWGIYLTGVQLGNYLFFGNHSTTMWRSNKWARTRVWILSLLFWLLTVF 409
Query: 181 LDRHIERVSRRMCNLAYVTWIASLNLQ 207
LDRH+ERVSRRMCNLAYVT + + NLQ
Sbjct: 410 LDRHVERVSRRMCNLAYVTLVLAQNLQ 436
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Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297742086|emb|CBI33873.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|356523876|ref|XP_003530560.1| PREDICTED: uncharacterized protein At4g17910-like [Glycine max] | Back alignment and taxonomy information |
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| >gi|357517003|ref|XP_003628790.1| GPI-anchored wall transfer protein [Medicago truncatula] gi|355522812|gb|AET03266.1| GPI-anchored wall transfer protein [Medicago truncatula] | Back alignment and taxonomy information |
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| >gi|449462027|ref|XP_004148743.1| PREDICTED: uncharacterized protein At4g17910-like [Cucumis sativus] gi|449515271|ref|XP_004164673.1| PREDICTED: uncharacterized protein At4g17910-like [Cucumis sativus] | Back alignment and taxonomy information |
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| >gi|357112043|ref|XP_003557819.1| PREDICTED: uncharacterized protein At4g17910-like [Brachypodium distachyon] | Back alignment and taxonomy information |
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| >gi|326491667|dbj|BAJ94311.1| predicted protein [Hordeum vulgare subsp. vulgare] gi|326502334|dbj|BAJ95230.1| predicted protein [Hordeum vulgare subsp. vulgare] | Back alignment and taxonomy information |
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| >gi|240255979|ref|NP_193525.5| transferase [Arabidopsis thaliana] gi|374095465|sp|B3H6K1.2|Y4791_ARATH RecName: Full=Uncharacterized protein At4g17910; Flags: Precursor gi|332658567|gb|AEE83967.1| transferase [Arabidopsis thaliana] | Back alignment and taxonomy information |
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| >gi|115453261|ref|NP_001050231.1| Os03g0378200 [Oryza sativa Japonica Group] gi|108708446|gb|ABF96241.1| GWT1 family protein, expressed [Oryza sativa Japonica Group] gi|113548702|dbj|BAF12145.1| Os03g0378200 [Oryza sativa Japonica Group] gi|125544092|gb|EAY90231.1| hypothetical protein OsI_11800 [Oryza sativa Indica Group] gi|125586449|gb|EAZ27113.1| hypothetical protein OsJ_11046 [Oryza sativa Japonica Group] gi|215687203|dbj|BAG91768.1| unnamed protein product [Oryza sativa Japonica Group] | Back alignment and taxonomy information |
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| >gi|414867009|tpg|DAA45566.1| TPA: hypothetical protein ZEAMMB73_356436 [Zea mays] | Back alignment and taxonomy information |
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Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 207 | ||||||
| TAIR|locus:2141080 | 434 | AT4G17910 [Arabidopsis thalian | 0.990 | 0.472 | 0.589 | 1.1e-66 | |
| DICTYBASE|DDB_G0286111 | 492 | pigW "phosphatidylinositol gly | 0.893 | 0.376 | 0.387 | 2.4e-32 | |
| ZFIN|ZDB-GENE-080204-94 | 490 | zgc:175274 "zgc:175274" [Danio | 0.951 | 0.402 | 0.384 | 3.4e-28 | |
| CGD|CAL0005901 | 485 | GWT1 [Candida albicans (taxid: | 0.739 | 0.315 | 0.404 | 3.5e-28 | |
| UNIPROTKB|Q873N2 | 485 | GWT1 "GPI-anchored wall transf | 0.739 | 0.315 | 0.404 | 3.5e-28 | |
| UNIPROTKB|E1BR58 | 497 | PIGW "Uncharacterized protein" | 0.956 | 0.398 | 0.345 | 3.1e-27 | |
| RGD|727962 | 502 | Pigw "phosphatidylinositol gly | 0.975 | 0.402 | 0.342 | 5.8e-25 | |
| ASPGD|ASPL0000060621 | 474 | AN0827 [Emericella nidulans (t | 0.922 | 0.402 | 0.343 | 1.6e-24 | |
| SGD|S000003627 | 490 | GWT1 "Protein involved in the | 0.695 | 0.293 | 0.408 | 1.6e-24 | |
| UNIPROTKB|F1N3J6 | 503 | PIGW "Phosphatidylinositol-gly | 0.946 | 0.389 | 0.360 | 1.2e-23 |
| TAIR|locus:2141080 AT4G17910 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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Score = 678 (243.7 bits), Expect = 1.1e-66, P = 1.1e-66
Identities = 122/207 (58%), Positives = 160/207 (77%)
Query: 1 MDLGVGSFVFANAIVSRQARNIQSMNWKSALKSTGPLILLGFGRIVSTTGVDYQVHVGEY 60
MDLGVGSFV ANA+VSRQAR++ S NW + +K+T PL+LLGF R+V+T+GVDYQVHV EY
Sbjct: 147 MDLGVGSFVLANAVVSRQARDVSSGNWITGIKATAPLLLLGFIRLVTTSGVDYQVHVTEY 206
Query: 61 GVHWNFFFTLAAVSILTSIINIRPKYCGILGSVILIGYQSWLIRGLNVYLLSNERGTDII 120
GVHWNFFFTLAA+SILTS +NI KYCG+LG +L GYQ+WL+ GLN YLLS+ERGTDII
Sbjct: 207 GVHWNFFFTLAAISILTSFVNIPAKYCGLLGFAVLAGYQTWLLSGLNTYLLSDERGTDII 266
Query: 121 SQNKEGIFSIFGYWGLYLVGVQLGHYIFFGNNSQSASRSNKAAFIKTWXXXXXXXXXXXX 180
S+NKEG++SI GYWG+YL+GV LG+ +F+G ++ RS ++ + +
Sbjct: 267 SKNKEGVYSILGYWGMYLLGVHLGYRLFYGKHTNI--RSTTSSIARVFLVSLLLWIVTIL 324
Query: 181 XDRHIERVSRRMCNLAYVTWIASLNLQ 207
D ++ER+SRR CN+ YVTW+ + +LQ
Sbjct: 325 FDNYVERISRRTCNMPYVTWVLAQDLQ 351
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| DICTYBASE|DDB_G0286111 pigW "phosphatidylinositol glycan, class W" [Dictyostelium discoideum (taxid:44689)] | Back alignment and assigned GO terms |
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| ZFIN|ZDB-GENE-080204-94 zgc:175274 "zgc:175274" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
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| CGD|CAL0005901 GWT1 [Candida albicans (taxid:5476)] | Back alignment and assigned GO terms |
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| UNIPROTKB|Q873N2 GWT1 "GPI-anchored wall transfer protein 1" [Candida albicans SC5314 (taxid:237561)] | Back alignment and assigned GO terms |
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| UNIPROTKB|E1BR58 PIGW "Uncharacterized protein" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
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| RGD|727962 Pigw "phosphatidylinositol glycan anchor biosynthesis, class W" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
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| ASPGD|ASPL0000060621 AN0827 [Emericella nidulans (taxid:162425)] | Back alignment and assigned GO terms |
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| SGD|S000003627 GWT1 "Protein involved in the inositol acylation of GlcN-PI" [Saccharomyces cerevisiae (taxid:4932)] | Back alignment and assigned GO terms |
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| UNIPROTKB|F1N3J6 PIGW "Phosphatidylinositol-glycan biosynthesis class W protein" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 207 | |||
| COG5062 | 429 | COG5062, COG5062, Uncharacterized membrane protein | 2e-35 | |
| pfam06423 | 133 | pfam06423, GWT1, GWT1 | 6e-21 |
| >gnl|CDD|227394 COG5062, COG5062, Uncharacterized membrane protein [Function unknown] | Back alignment and domain information |
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Score = 129 bits (325), Expect = 2e-35
Identities = 72/207 (34%), Positives = 109/207 (52%), Gaps = 17/207 (8%)
Query: 1 MDLGVGSFVFANAIVSRQARNIQSMNWKSALKSTGPLILLGFGRIVSTTGVDYQVHVGEY 60
MD+GVGSFV+ + IVS +A++ K LK+ L+ LGF R S ++YQVHV EY
Sbjct: 152 MDIGVGSFVYNSGIVSTRAKS------KRKLKNALILLFLGFLRYFSVKLLNYQVHVREY 205
Query: 61 GVHWNFFFTLAAVSILTSIINIRPKYCGILGSVILIGYQSWLIR-GLNVYLLSNERGTDI 119
GVHWNFFFTL +++ + I R + +LG I + ++ L GL ++ S R + I
Sbjct: 206 GVHWNFFFTLGLLNLASLFIRTRANF--LLGFFICLTHELLLKFFGLEKFIYSAAR-SSI 262
Query: 120 ISQNKEGIFSIFGYWGLYLVGVQLGHYIFFGNNSQSASRSNKAAFIKTWLLGILTGLLTL 179
++ N+EGI S+ Y ++L+G G +F + + K +L L
Sbjct: 263 LTSNREGITSLLPYISIFLMGADTGKVVF-------KKKPTRKKAWKIIILYNAFFLCVY 315
Query: 180 LLDRHIERVSRRMCNLAYVTWIASLNL 206
L+ SRR+ NL +V WI L+
Sbjct: 316 LVFNFYSTSSRRLANLPFVMWIMLLHT 342
|
Length = 429 |
| >gnl|CDD|219021 pfam06423, GWT1, GWT1 | Back alignment and domain information |
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Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 207 | |||
| COG5062 | 429 | Uncharacterized membrane protein [Function unknown | 100.0 | |
| KOG0411 | 405 | consensus Uncharacterized membrane protein [Functi | 100.0 | |
| PF06423 | 136 | GWT1: GWT1; InterPro: IPR009447 Glycosylphosphatid | 99.94 | |
| PF07786 | 223 | DUF1624: Protein of unknown function (DUF1624); In | 96.5 |
| >COG5062 Uncharacterized membrane protein [Function unknown] | Back alignment and domain information |
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Probab=100.00 E-value=8e-55 Score=390.69 Aligned_cols=189 Identities=38% Similarity=0.646 Sum_probs=161.4
Q ss_pred CCcchhHhhhcccccchhhhchhhhhhHHhhhhhhhHHhhhhhHhhhhccccccccccccccchHHHHHHHHHHHHHHHh
Q 042839 1 MDLGVGSFVFANAIVSRQARNIQSMNWKSALKSTGPLILLGFGRIVSTTGVDYQVHVGEYGVHWNFFFTLAAVSILTSII 80 (207)
Q Consensus 1 MDlGVGsFVfs~glVS~~ar~~~~~~~~~~lr~~~pLl~LG~~R~~~vk~~~Y~ehvtEYGvHWNFFfTLa~v~l~~~l~ 80 (207)
||+|||||||++|+||.|+|+ ++.+|+.+.+++||+.|.+++|.+||||||+|||+|||||||||++.+...++
T Consensus 152 MDiGVGSFvynsGivs~Raks------K~~lkn~lillflGflR~f~vk~lnyqvhvrEyGvhwNFfftLgllnl~~~fi 225 (429)
T COG5062 152 MDIGVGSFVYNSGIVSTRAKS------KRKLKNALILLFLGFLRYFSVKLLNYQVHVREYGVHWNFFFTLGLLNLASLFI 225 (429)
T ss_pred eecccceeEeccceeecccCc------cHHHHhhhHHHHHHHHHHHHHHHhccccccHHheeehhHHHHHHHHHHHHHHh
Confidence 999999999999999998775 34688999999999999999999999999999999999999999999999998
Q ss_pred hcCchhhHHHHHHHHHHHHHHHh-hcccccccccccccccccccchhhhhhhhHHHHHHHHHhhcceeeccCCCcccchh
Q 042839 81 NIRPKYCGILGSVILIGYQSWLI-RGLNVYLLSNERGTDIISQNKEGIFSIFGYWGLYLVGVQLGHYIFFGNNSQSASRS 159 (207)
Q Consensus 81 ~~~~~~~~~~~~~i~~~yq~~L~-~gl~~~il~~~r~~~~lsaNrEGi~S~~GY~aiyl~g~~~G~~i~~~~~~~~~~~~ 159 (207)
+...++ .+|+.+.+.||++|. .|+++|+++|+| ++++++|||||.|++||++||++|+++|+.++++++++ .+.
T Consensus 226 r~r~nf--lLg~fi~l~he~lLkf~~l~kfi~sa~R-~~il~~NrEGI~sll~yisIfl~g~~tg~vvf~~kpTr--~~~ 300 (429)
T COG5062 226 RTRANF--LLGFFICLTHELLLKFFGLEKFIYSAAR-SSILTSNREGITSLLPYISIFLMGADTGKVVFKKKPTR--KKA 300 (429)
T ss_pred hhhHhH--HHHHHHHHHHHHHHHhccHHHhhhcCch-hhHHHhchhhhhhcchhhhheeeecccceEEecCCCch--HHH
Confidence 755554 789999999999998 699999999999 79999999999999999999999999999999987653 222
Q ss_pred hHHHHHHHHHHHHHHHH-HHHHHhhcCCCccccccchhHHHHHHHhcC
Q 042839 160 NKAAFIKTWLLGILTGL-LTLLLDRHIERVSRRMCNLAYVTWIASLNL 206 (207)
Q Consensus 160 ~~~~~~~~~~~~~~~w~-~~~~~~~~~~~vSRRlaNl~YvlWv~a~nl 206 (207)
|. .++. ..++.. ++.+.+.+.++ |||+||+|||+||+++|.
T Consensus 301 wk--~~~~---~~af~lciylVfnf~s~s-sRRlaNlpfv~wi~~lh~ 342 (429)
T COG5062 301 WK--IIIL---YNAFFLCVYLVFNFYSTS-SRRLANLPFVMWIMLLHT 342 (429)
T ss_pred HH--HHHH---HHHHHHHHHHHHhhcccc-hhhhcCccHHHHHHHHHH
Confidence 32 2221 112222 24445666666 999999999999999984
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| >KOG0411 consensus Uncharacterized membrane protein [Function unknown] | Back alignment and domain information |
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| >PF06423 GWT1: GWT1; InterPro: IPR009447 Glycosylphosphatidylinositol (GPI) is a conserved post-translational modification to anchor cell surface proteins to plasma membrane in eukaryotes | Back alignment and domain information |
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| >PF07786 DUF1624: Protein of unknown function (DUF1624); InterPro: IPR012429 These sequences are found in hypothetical proteins of unknown function expressed by bacterial and archaeal species | Back alignment and domain information |
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Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
No hit with e-value below 0.005
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
No hit with probability above 80.00
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
No hit with probability above 80.00