Citrus Sinensis ID: 043003

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-------800-------810-------820-------830-------840-------850-----
MKGVVFSNVLIYFLLCNLAFAKECVNLFPNKAELASSTMRAKLSSINDEAWKKEMLSSYQLRSPANEGPEASKFQAAEEKFDNTMLRNTNATGDFKLPGDFLKEVSLHDVRLLPNSMHWRAQQTNLEYLVMLDVDRLVWSFRKTAGLPTPGAPYGGWEDQKMELRGHFLGHYLSATAMAWASTRNETVKQKMDAVMSVLSECQKKIGTGYLSAFPSEFFDRLENLVYVWAPYYTIHKIMAGLLDQYTLANNGQALNITIWMADYFNTRVQNLIARSSLERHYQTLNDESGGMNDVLYKLYGITKDPKHLKLAELFDKPCFLGLLAVKADNIAGLHANTHIPLVCGVQNRYELTGDEQSMAMGTFFMDIINSSHSYATGGTSHQEFWTDPKRIATALSAETEESCTTYNMLKVSRYLFKWTKQVTYADYYERALTNGVLGIQRGTEPGVMIYMLPLSPGSSKAKSYHGWGDAFDSFWCCYGTGIESFAKLGDSIYFEQEGKGPGVYIIQYISSTFDWKAGQIVIHQNVDPVVSWDQNLRMALTFTSNKGPGVSSVLNLRIPFWANPNGGKATLNKDNLQIPSPGNFLSVTRAWSPDEKLFIQLPINLRTEAIKDDRPQYASLQAIFYGPYLLAGYSQHDHEIKTGPVKSLSEWITPIPASYNAGLVTFSQKSGNSSLVLMKNQSVTIEPWPAAGTGGDANATFRLIGNDQRPINFTTVKNVISKQVMFEPFDFPGKLLMQQGNNDSLVIANNPGNSVFQVNAGLDGKPDTVSLESVSRKGCFVFSDVNLKAGTALKLNCQQPDDGFKQAASFVMQKGISQYHPISFLAKGSNRNYLLAPLLSFRDESYSVYFNITN
cccccHHHHHHHHHHHHccccccccccccccccccccccccccccccHHHHHHHHHcccccccccccccccccccHHHHHcccccccccccccccccccccccccccccEEEccccHHHHHHHHHHHHHHHccccHHHHHHHHHcccccccccccccccccccccccccHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHcccccccccHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHcccccccHHHHHccccccccccHHHHHHHHHHHcccHHHHHHHHHHcccccccccccccccccccccccHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHccEEEcccccccccccccccccccccccccccHHHHHHHHHHHHHHHccccccHHHHHHHHHHcccccccccccccEEEEEccccccccccccccccccccccccccccccccHHHHccccEEEEEcccccEEEEEEccccEEEEEEccEEEEEEEcccccccccEEEEEEEEEcccccEEEEEEEEccccccccccEEEEccccccccccccEEEEEEEcccccEEEEEEccEEEEEEccccccccccEEEEEEccEEEcccccccccccccccccccccccccccccccccEEEEEcccccEEEEEccccEEEEEccccccccccccEEEEEccccccccccccccccccccccccccccccEEEEccccccccccccccccEEEEEcccccccccEEEEEcccccEEEEEEcccccccEEEEEEccccccccccccccccccccccccccEEEccccccEEEccccccccccEEEEEEEEc
ccHHHHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHccccHHHHHHHHHHccccccccHHHHHHHccHHHHHHHHHHHHHHcccccccccccccccccHcHEEEccccHHHHHHHHHHHHHHcccHHHHHHHHHHHccccccccccccccccccccccccHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHccccEEccccHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHcccHHHHHHHHHHHHccHHHHHHHHHcccHHHHHHHHHcccccccccccccccHEEEHHHHHHHcccHHHHHHHHHHHHHHHcccEEEEcccccccccccHHHHHHHHccccccccHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHccccccccEEEEEEccccccccccccccEccccccEEEccccccccccccccEEEEEccccccEEEEEEEEccEEEcccccEEEEEEEccccccccccEEEEEEEEEcccccEEEEEEEcccHccccccEEEEccEEEcccccccEEEEEEEcccccEEEEEEcccEEEEEccccccccccEEEEEcccEEEEEcccccccccccccccHccccccccccccccEEEEEcccccEEEEEEcccEEEEEEcccccccccEEEEEEEEcccccccccccHHHccccEEEEEEcccccEEEEEcccccEEEEEccccccEEEEEccccccccEEEEEEcccccEEEEEccccccccEEEEEcccccHHHHHHHHHHHHccccccccEEEEEccccccEcHccHHcccccEEEEEEEEcc
MKGVVFSNVLIYFLLCNLAFAKECVNLFPNKAELASSTMRAKLSSINDEAWKKEMLSsyqlrspanegpeaskfqAAEEKFDNtmlrntnatgdfklpgdflkevslhdvrllpnsmHWRAQQTNLEYLVMLDVDRLVWSFRktaglptpgapyggwedqkMELRGHFLGHYLSATAMAWASTRNETVKQKMDAVMSVLSECQKKIgtgylsafpseFFDRLENLVYVWAPYYTIHKIMAGLLDQytlanngqaLNITIWMADYFNTRVQNLIARSSLERHYQTlndesggmnDVLYKLYGitkdpkhlklaelfdkpcflGLLAVkadniaglhanthiplvcgvqnryeltgdeqsMAMGTFFMDIInsshsyatggtshqefwtdpKRIATALSAETEESCTTYNMLKVSRYLFKWTKQVTYADYYERALTngvlgiqrgtepgvmiymlplspgsskaksyhgwgdafdsfwccygtgiesfaklgdsiyfeqegkgpgVYIIQYISSTfdwkagqivihqnvdpvvswDQNLRMALTFtsnkgpgvssvlnlripfwanpnggkatlnkdnlqipspgnflsvtrawspdeklfIQLPinlrteaikddrpqyasLQAIFygpyllagysqhdheiktgpvkslsewitpipasynagLVTFsqksgnsslvlmknqsvtiepwpaagtggdanatfrligndqrpinftTVKNVISkqvmfepfdfpgkllmqqgnndslviannpgnsvfqvnagldgkpdtvslesvsrkgcfvfsdvnlkagtalklncqqpddgFKQAASFVMQKgisqyhpisflakgsnrnyllapllsfrdesySVYFNITN
MKGVVFSNVLIYFLLCNLAFAKECVNLFPNKAELASSTMRAKLSSINDEAWKKEMLSSYQLRSPANEGPEASKFQAAEEKFDNTMLRNTNATGDFKLPGDFLKEVSLHDVRLLPNSMHWRAQQTNLEYLVMLDVDRLVWSFRKtaglptpgapygGWEDQKMELRGHFLGHYLSATAMAWASTRNETVKQKMDAVMSVLSECQKKIGTGYLSAFPSEFFDRLENLVYVWAPYYTIHKIMAGLLDQYTLANNGQALNITIWMADYFNTRVQNLIARSSLERHYQtlndesggmNDVLYKLYGITKDPKHLKLAELFDKPCFLGLLAVKADNIAGLHANTHIPLVCGVQNRYELTGDEQSMAMGTFFMDIINSSHSYATGGTSHQEFWTDPKRIATALsaeteescttynMLKVSRYLFKWTKQVTYADYYERALTNGVLGIQRGTEPGVMIYMLPLSPGSSKAKSYHGWGDAFDSFWCCYGTGIESFAKLGDSIYFEQEGKGPGVYIIQYISSTFDWKAGQIVIHQNVDPVVSWDQNLRMALTFTSNKGPGVSSVLNLRIPFWANPNGGKATLNKDNLQIPSPGNFLSVTRAWSPDEKLFIQLPINLRTEAIKDDRPQYASLQAIFYGPYLLAGYSQHDHEIKTGPVKSLSEWITPIPASYNAGLVTFSQKSGNSSLVLMKNQSVTIEPWPAAGTGGDANATFRLIGNDQRPINFTTVKNVISKQVMFEPFDFPGKLLMQQGNNDSLVIANNPGNSVFQVNAGLDGKPDTVSLESVSRKGCFVFSDVNLKAGTALKLNCQQPDDGFKQAASFVMQKGISQYHPISFLAKGSNRNYLLAPllsfrdesysvYFNITN
MKGVVFSNVLIYFLLCNLAFAKECVNLFPNKAELASSTMRAKLSSINDEAWKKEMLSSYQLRSPANEGPEASKFQAAEEKFDNTMLRNTNATGDFKLPGDFLKEVSLHDVRLLPNSMHWRAQQTNLEYLVMLDVDRLVWSFRKTAGLPTPGAPYGGWEDQKMELRGHFLGHYLSATAMAWASTRNETVKQKMDAVMSVLSECQKKIGTGYLSAFPSEFFDRLENLVYVWAPYYTIHKIMAGLLDQYTLANNGQALNITIWMADYFNTRVQNLIARSSLERHYQTLNDESGGMNDVLYKLYGITKDPKHLKLAELFDKPCFLGLLAVKADNIAGLHANTHIPLVCGVQNRYELTGDEQSMAMGTFFMDIINSSHSYATGGTSHQEFWTDPKRIATALSAETEESCTTYNMLKVSRYLFKWTKQVTYADYYERALTNGVLGIQRGTEPGVMIYMLPLSPGSSKAKSYHGWGDAFDSFWCCYGTGIESFAKLGDSIYFEQEGKGPGVYIIQYISSTFDWKAGQIVIHQNVDPVVSWDQNLRMALTFTSNKGPGVSSVLNLRIPFWANPNGGKATLNKDNLQIPSPGNFLSVTRAWSPDEKLFIQLPINLRTEAIKDDRPQYASLQAIFYGPYLLAGYSQHDHEIKTGPVKSLSEWITPIPASYNAGLVTFSQKSGNSSLVLMKNQSVTIEPWPAAGTGGDANATFRLIGNDQRPINFTTVKNVISKQVMFEPFDFPGKLLMQQGNNDSLVIANNPGNSVFQVNAGLDGKPDTVSLESVSRKGCFVFSDVNLKAGTALKLNCQQPDDGFKQAASFVMQKGISQYHPISFLAKGSNRNYLLAPLLSFRDESYSVYFNITN
***VVFSNVLIYFLLCNLAFAKECVNLFPNK************************************************************TGDFKLPGDFLKEVSLHDVRLLPNSMHWRAQQTNLEYLVMLDVDRLVWSFRKTAGLPTPGAPYGGWEDQKMELRGHFLGHYLSATAMAWASTRNETVKQKMDAVMSVLSECQKKIGTGYLSAFPSEFFDRLENLVYVWAPYYTIHKIMAGLLDQYTLANNGQALNITIWMADYFNTRVQNLIARSSLERHYQTLNDESGGMNDVLYKLYGITKDPKHLKLAELFDKPCFLGLLAVKADNIAGLHANTHIPLVCGVQNRYELTGDEQSMAMGTFFMDIINSSHSYATGGTSHQEFWTDPKRIATALSAETEESCTTYNMLKVSRYLFKWTKQVTYADYYERALTNGVLGIQRGTEPGVMIYMLPLSPGSSKAKSYHGWGDAFDSFWCCYGTGIESFAKLGDSIYFEQEGKGPGVYIIQYISSTFDWKAGQIVIHQNVDPVVSWDQNLRMALTFTSNKGPGVSSVLNLRIPFWANPNGGKATLNKDNLQIPSPGNFLSVTRAWSPDEKLFIQLPINLRTEAIKDDRPQYASLQAIFYGPYLLAGYSQHDHEIKTGPVKSLSEWITPIPASYNAGLVTFSQKSGNSSLVLMKNQSVTIEPWPAAGTGGDANATFRLIGNDQRPINFTTVKNVISKQVMFEPFDFPGKLLMQQGNNDSLVIANNPGNSVFQVNAGLDGKPDTVSLESVSRKGCFVFSDVNLKAGTALKLNCQQPDDGFKQAASFVMQKGISQYHPISFLAKGSNRNYLLAPLLSFRDESYSVYFNI**
**GVVFSNVLIYFLLCNLAFAKECVNLFPNK*************************SSYQLRSPANE**********************************LKEVSLHDVRLLPNSMHWRAQQTNLEYLVMLDVDRLVWSFRKTAGLPTPGAPYGGWEDQKMELRGHFLGHYLSATAMAWASTRNETVKQKMDAVMSVLSECQKKIGTGYLSAFPSEFFDRLENLVYVWAPYYTIHKIMAGLLDQYTLANNGQALNITIWMADYFNTRVQNLIARSSLERHYQTLNDESGGMNDVLYKLYGITKDPKHLKLAELFDKPCFLGLLAVKADNIAGLHANTHIPLVCGVQNRYELTGDEQSMAMGTFFMDIINSSHSYATGGTSHQEFWTDPKRIATALSAETEESCTTYNMLKVSRYLFKWTKQVTYADYYERALTNGVLGIQRGTEPGVMIYMLPLSPGSSKAKSYHGWGDAFDSFWCCYGTGIESFAKLGDSIYFEQEGKGPGVYIIQYISSTFDWKAGQIVIHQNVDPVVSWDQNLRMALTFTSNKGPGVSSVLNLRIPFWANPNGGKATLNKDNLQIPSPGNFLSVTRAWSPDEKLFIQLPINLRTEAIKDDRPQYASLQAIFYGPYLLAGYSQHDHEIKTGPVKSLSEWITPIPASYNAGLVTFSQKSGNSSLVLMKNQSVTIEPWPAAGTGGDANATFRLIGNDQR****************FEPFDFPGKLLMQQGNNDS**IANNPGNSVFQVNAGLDGKPDTVSLESVSRKGCFVFSDVNLKAGT***********GFKQAASFVMQKGISQYHPISFLAKGSNRNYLLAPLLSFRDESYSVYFNITN
MKGVVFSNVLIYFLLCNLAFAKECVNLFPNKAELASSTMRAKLSSINDEAWKKEMLSSYQLRSPANEGPEASKFQAAEEKFDNTMLRNTNATGDFKLPGDFLKEVSLHDVRLLPNSMHWRAQQTNLEYLVMLDVDRLVWSFRKTAGLPTPGAPYGGWEDQKMELRGHFLGHYLSATAMAWASTRNETVKQKMDAVMSVLSECQKKIGTGYLSAFPSEFFDRLENLVYVWAPYYTIHKIMAGLLDQYTLANNGQALNITIWMADYFNTRVQNLIARSSLERHYQTLNDESGGMNDVLYKLYGITKDPKHLKLAELFDKPCFLGLLAVKADNIAGLHANTHIPLVCGVQNRYELTGDEQSMAMGTFFMDIINSSHSYATGGTSHQEFWTDPKRIATALSAETEESCTTYNMLKVSRYLFKWTKQVTYADYYERALTNGVLGIQRGTEPGVMIYMLPLSPGSSKAKSYHGWGDAFDSFWCCYGTGIESFAKLGDSIYFEQEGKGPGVYIIQYISSTFDWKAGQIVIHQNVDPVVSWDQNLRMALTFTSNKGPGVSSVLNLRIPFWANPNGGKATLNKDNLQIPSPGNFLSVTRAWSPDEKLFIQLPINLRTEAIKDDRPQYASLQAIFYGPYLLAGYSQHDHEIKTGPVKSLSEWITPIPASYNAGLVTFSQKSGNSSLVLMKNQSVTIEPWPAAGTGGDANATFRLIGNDQRPINFTTVKNVISKQVMFEPFDFPGKLLMQQGNNDSLVIANNPGNSVFQVNAGLDGKPDTVSLESVSRKGCFVFSDVNLKAGTALKLNCQQPDDGFKQAASFVMQKGISQYHPISFLAKGSNRNYLLAPLLSFRDESYSVYFNITN
*KGVVFSNVLIYFLLCNLAFAKECVNLFPNKAELASSTMRAKLSSINDEAWKKEMLSSYQLRSPANEGPEASKFQAAEEKFDNTMLRNTNATGD***PGDFLKEVSLHDVRLLPNSMHWRAQQTNLEYLVMLDVDRLVWSFRKTAGLPTPGAPYGGWEDQKMELRGHFLGHYLSATAMAWASTRNETVKQKMDAVMSVLSECQKKIGTGYLSAFPSEFFDRLENLVYVWAPYYTIHKIMAGLLDQYTLANNGQALNITIWMADYFNTRVQNLIARSSLERHYQTLNDESGGMNDVLYKLYGITKDPKHLKLAELFDKPCFLGLLAVKADNIAGLHANTHIPLVCGVQNRYELTGDEQSMAMGTFFMDIINSSHSYATGGTSHQEFWTDPKRIATALSAETEESCTTYNMLKVSRYLFKWTKQVTYADYYERALTNGVLGIQRGTEPGVMIYMLPLSPGSSKAKSYHGWGDAFDSFWCCYGTGIESFAKLGDSIYFEQEGKGPGVYIIQYISSTFDWKAGQIVIHQNVDPVVSWDQNLRMALTFTSNKGPGVSSVLNLRIPFWANPNGGKATLNKDNLQIPSPGNFLSVTRAWSPDEKLFIQLPINLRTEAIKDDRPQYASLQAIFYGPYLLAGYSQHDHE****PVKSLSEWITPIPASYNAGLVTFSQKSGNSSLVLMKNQSVTIEPWPAAGTGGDANATFRLIGNDQRPINFTTVKNVISKQVMFEPFDFPGKLLMQQGNNDSLVIANNPGNSVFQVNAGLDGKPDTVSLESVSRKGCFVFSDVNLKAGTALKLNCQQPDDGFKQAASFVMQKGISQYHPISFLAKGSNRNYLLAPLLSFRDESYSVYFNITN
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
SSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MKGVVFSNVLIYFLLCNLAFAKECVNLFPNKAELASSTMRAKLSSINDEAWKKEMLSSYQLRSPANEGPEASKFQAAEEKFDNTMLRNTNATGDFKLPGDFLKEVSLHDVRLLPNSMHWRAQQTNLEYLVMLDVDRLVWSFRKTAGLPTPGAPYGGWEDQKMELRGHFLGHYLSATAMAWASTRNETVKQKMDAVMSVLSECQKKIGTGYLSAFPSEFFDRLENLVYVWAPYYTIHKIMAGLLDQYTLANNGQALNITIWMADYFNTRVQNLIARSSLERHYQTLNDESGGMNDVLYKLYGITKDPKHLKLAELFDKPCFLGLLAVKADNIAGLHANTHIPLVCGVQNRYELTGDEQSMAMGTFFMDIINSSHSYATGGTSHQEFWTDPKRIATALSAETEESCTTYNMLKVSRYLFKWTKQVTYADYYERALTNGVLGIQRGTEPGVMIYMLPLSPGSSKAKSYHGWGDAFDSFWCCYGTGIESFAKLGDSIYFEQEGKGPGVYIIQYISSTFDWKAGQIVIHQNVDPVVSWDQNLRMALTFTSNKGPGVSSVLNLRIPFWANPNGGKATLNKDNLQIPSPGNFLSVTRAWSPDEKLFIQLPINLRTEAIKDDRPQYASLQAIFYGPYLLAGYSQHDHEIKTGPVKSLSEWITPIPASYNAGLVTFSQKSGNSSLVLMKNQSVTIEPWPAAGTGGDANATFRLIGNDQRPINFTTVKNVISKQVMFEPFDFPGKLLMQQGNNDSLVIANNPGNSVFQVNAGLDGKPDTVSLESVSRKGCFVFSDVNLKAGTALKLNCQQPDDGFKQAASFVMQKGISQYHPISFLAKGSNRNYLLAPLLSFRDESYSVYFNITN
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query855
224053368858 predicted protein [Populus trichocarpa] 0.989 0.986 0.617 0.0
225435510864 PREDICTED: uncharacterized protein LOC10 0.992 0.982 0.616 0.0
224075776858 predicted protein [Populus trichocarpa] 0.975 0.972 0.616 0.0
359478753874 PREDICTED: uncharacterized protein LOC10 0.992 0.971 0.604 0.0
449448754868 PREDICTED: uncharacterized protein LOC10 0.974 0.959 0.596 0.0
356557388841 PREDICTED: uncharacterized protein LOC10 0.964 0.980 0.591 0.0
297746368741 unnamed protein product [Vitis vinifera] 0.845 0.975 0.648 0.0
297811349860 hypothetical protein ARALYDRAFT_488069 [ 0.976 0.970 0.561 0.0
356541181854 PREDICTED: uncharacterized protein LOC10 0.984 0.985 0.577 0.0
297807309860 hypothetical protein ARALYDRAFT_350453 [ 0.976 0.970 0.560 0.0
>gi|224053368|ref|XP_002297785.1| predicted protein [Populus trichocarpa] gi|222845043|gb|EEE82590.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
 Score = 1103 bits (2853), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 533/863 (61%), Positives = 656/863 (76%), Gaps = 17/863 (1%)

Query: 1   MKGVVFSNVLIYFLLCNLAFAKECVNLFPNKAELASSTMRAKLSSINDEAWKKEMLSSYQ 60
           MKG++   +++  +LC    +KEC N      +L+S T R  L S  +E WK+EM + Y 
Sbjct: 1   MKGLIV--LVVLSMLCGFGTSKECTN---TPTQLSSHTFRYALLSSENETWKEEMFAHYH 55

Query: 61  LRSPANEGPEAS----KFQAAEEKFDNTMLRNTNATGDFKLPGDFLKEVSLHDVRLLPNS 116
           L +P ++   A+    K    E+++   M+   N     K  G+FLKEVSLH+VRL P+S
Sbjct: 56  L-TPTDDSAWANLLPRKILREEDEYSWAMMYR-NLKSPLKSSGNFLKEVSLHNVRLDPSS 113

Query: 117 MHWRAQQTNLEYLVMLDVDRLVWSFRKTAGLPTPGAPYGGWEDQKMELRGHFLGHYLSAT 176
           +HW+AQQTNLEYL+MLDVD LVWSFRKTAGL TPG  YGGWE    ELRGHF+GHYLSA+
Sbjct: 114 IHWQAQQTNLEYLLMLDVDSLVWSFRKTAGLSTPGTAYGGWEAPNCELRGHFVGHYLSAS 173

Query: 177 AMAWASTRNETVKQKMDAVMSVLSECQKKIGTGYLSAFPSEFFDRLENLVYVWAPYYTIH 236
           A  WAST N+ ++++M AV+S LS CQ+K+G+GYLSAFPSE FDR E +  VWAPYYTIH
Sbjct: 174 AQMWASTHNDILEKQMSAVVSALSSCQEKMGSGYLSAFPSELFDRFEAIKPVWAPYYTIH 233

Query: 237 KIMAGLLDQYTLANNGQALNITIWMADYFNTRVQNLIARSSLERHYQTLNDESGGMNDVL 296
           KI+AGLLDQYT A+N QAL +  WM DYF  RV+N+I   S+ERHYQ+LN+E+GGMNDVL
Sbjct: 234 KILAGLLDQYTFADNAQALKMVKWMVDYFYNRVRNVITNFSVERHYQSLNEETGGMNDVL 293

Query: 297 YKLYGITKDPKHLKLAELFDKPCFLGLLAVKADNIAGLHANTHIPLVCGVQNRYELTGDE 356
           YKL+ IT DPKHL LA LFDKPCFLGLLAV+A++I+G HANTHIP+V G Q RYE+TGD 
Sbjct: 294 YKLFSITGDPKHLVLAHLFDKPCFLGLLAVQAEDISGFHANTHIPIVIGAQMRYEITGDP 353

Query: 357 QSMAMGTFFMDIINSSHSYATGGTSHQEFWTDPKRIATALSAETEESCTTYNMLKVSRYL 416
               +GTFFMDI+NSSHSYATGGTS  EFW+DPKR+A+ L  E EESCTTYNMLKVSR+L
Sbjct: 354 LYKDIGTFFMDIVNSSHSYATGGTSVSEFWSDPKRLASTLQTENEESCTTYNMLKVSRHL 413

Query: 417 FKWTKQVTYADYYERALTNGVLGIQRGTEPGVMIYMLPLSPGSSKAKSYHGWGDAFDSFW 476
           F+WTK++ YADYYERALTNGVLGIQRGTEPGVMIYMLP  PGSSK KSYHGWG  +D+FW
Sbjct: 414 FRWTKEMAYADYYERALTNGVLGIQRGTEPGVMIYMLPQHPGSSKGKSYHGWGTLYDTFW 473

Query: 477 CCYGTGIESFAKLGDSIYFEQEGKGPGVYIIQYISSTFDWKAGQIVIHQNVDPVVSWDQN 536
           CCYGTGIESF+KLGDSIYFE+EG+ PG+YIIQYISS+ DWK+GQI+I+Q VDPVVS D  
Sbjct: 474 CCYGTGIESFSKLGDSIYFEEEGEAPGLYIIQYISSSLDWKSGQIMINQKVDPVVSSDPY 533

Query: 537 LRMALTFTSNKGPGVSSVLNLRIPFWANPNGGKATLNKDNLQIPSPGNFLSVTRAWSPDE 596
           LR+  TF+ NKG   +S LNLRIP W + +G  AT+N  +L IP+PG+FLSV R WS  +
Sbjct: 534 LRVTFTFSPNKGSSQASTLNLRIPVWTHLDGATATINSQSLAIPAPGSFLSVNRKWSSGD 593

Query: 597 KLFIQLPINLRTEAIKDDRPQYASLQAIFYGPYLLAGYSQHDHEIKTGPVKSLSEWITPI 656
           KL +QLPI+LRTEAI+DDR QYAS+QAI YGPYLLAG++  D  +K G   SLS+ ITPI
Sbjct: 594 KLSLQLPISLRTEAIQDDRHQYASIQAILYGPYLLAGHTSGDWNLKAGSAGSLSDSITPI 653

Query: 657 PASYNAGLVTFSQKSGNSSLVLM-KNQSVTIEPWPAAGTGGDANATFRLIGNDQRPINFT 715
           PASYN  LV+FSQ SGNS+ VL   NQS+T+E  P +GT     ATFR++ ND       
Sbjct: 654 PASYNEQLVSFSQDSGNSTFVLTNSNQSITMEEHPKSGTDACLQATFRIVFNDSSSSEVL 713

Query: 716 TVKNVISKQVMFEPFDFPGKLLMQQGNNDSLVIAN---NPGNSVFQVNAGLDGKPDTVSL 772
            + +VI K VM EPFD PG LL+QQG + SL + N   + G+S+F V  GLDGK  TVSL
Sbjct: 714 GINDVIDKSVMLEPFDLPGMLLVQQGKDSSLAVTNSAADDGSSIFHVVLGLDGKDGTVSL 773

Query: 773 ESVSRKGCFVFSDVNLKAGTALKLNCQ--QPDDGFKQAASFVMQKGISQYHPISFLAKGS 830
           ES S++GC+++S VN K+G ++KL+C+    D GF Q ASFVM KG+S+YHPISF+A+G 
Sbjct: 774 ESGSQEGCYIYSGVNYKSGQSMKLSCKLGSSDPGFNQGASFVMNKGLSEYHPISFVAEGD 833

Query: 831 NRNYLLAPLLSFRDESYSVYFNI 853
            RN+LLAPL S RDE Y++YFNI
Sbjct: 834 KRNFLLAPLHSLRDEFYTIYFNI 856

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|225435510|ref|XP_002285548.1| PREDICTED: uncharacterized protein LOC100246702 [Vitis vinifera] Back     alignment and taxonomy information
>gi|224075776|ref|XP_002304762.1| predicted protein [Populus trichocarpa] gi|222842194|gb|EEE79741.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|359478753|ref|XP_002283032.2| PREDICTED: uncharacterized protein LOC100250068 [Vitis vinifera] Back     alignment and taxonomy information
>gi|449448754|ref|XP_004142130.1| PREDICTED: uncharacterized protein LOC101207833 [Cucumis sativus] Back     alignment and taxonomy information
>gi|356557388|ref|XP_003546998.1| PREDICTED: uncharacterized protein LOC100815634 [Glycine max] Back     alignment and taxonomy information
>gi|297746368|emb|CBI16424.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|297811349|ref|XP_002873558.1| hypothetical protein ARALYDRAFT_488069 [Arabidopsis lyrata subsp. lyrata] gi|297319395|gb|EFH49817.1| hypothetical protein ARALYDRAFT_488069 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|356541181|ref|XP_003539059.1| PREDICTED: uncharacterized protein LOC100781521 [Glycine max] Back     alignment and taxonomy information
>gi|297807309|ref|XP_002871538.1| hypothetical protein ARALYDRAFT_350453 [Arabidopsis lyrata subsp. lyrata] gi|297317375|gb|EFH47797.1| hypothetical protein ARALYDRAFT_350453 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query855
TAIR|locus:2182295865 AT5G12960 [Arabidopsis thalian 0.984 0.973 0.568 3.3e-260
TAIR|locus:2182280861 AT5G12950 [Arabidopsis thalian 0.983 0.976 0.570 1.1e-259
UNIPROTKB|Q2KGY9633 MGCH7_ch7g196 "Putative unchar 0.623 0.842 0.338 9.6e-73
TAIR|locus:2182295 AT5G12960 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 2504 (886.5 bits), Expect = 3.3e-260, P = 3.3e-260
 Identities = 494/869 (56%), Positives = 638/869 (73%)

Query:     1 MK-GVVFS-NVLIYFLLCNLAFAKECVNLFPNKAELASSTMRAKLSSINDEAWKKEMLSS 58
             MK GV+ +  +L+Y     +  AKEC ++ P K  L+S T+R++L    +   K E  S 
Sbjct:     6 MKSGVIITIALLLYTSFLLVCLAKECTDI-PTK--LSSHTLRSELLQSQNANLKSEEFSH 62

Query:    59 YQLRSPANEGPEASKF--QAAEEKFDN---TMLRNTNATGDFKLPGDFLKEVSLHDVRLL 113
             Y L +P ++   ++    +  +E+ D+   TML       D    G+FLK+VSLHDVRL 
Sbjct:    63 YHL-TPTDDSAWSTLLPRKMLKEETDDFAWTMLYRKFK--DSNSSGNFLKDVSLHDVRLD 119

Query:   114 PNSMHWRAQQTNLEYLVMLDVDRLVWSFRKTAGLPTPGAPYGGWEDQKMELRGHFLGHYL 173
             P+S HWRAQQTNLEYL+MLDVD L ++FRK AGL  PG PYGGWE    ELRGHF+GHYL
Sbjct:   120 PSSFHWRAQQTNLEYLLMLDVDGLAYNFRKEAGLNAPGVPYGGWEKPDSELRGHFVGHYL 179

Query:   174 SATAMAWASTRNETVKQKMDAVMSVLSECQKKIGTGYLSAFPSEFFDRLENLVYVWAPYY 233
             SATA  WAST NET+K KM A++S L+ECQ+K GTGYLSAFPS FFDR E + +VWAPYY
Sbjct:   180 SATAYMWASTHNETLKAKMTALVSALAECQQKYGTGYLSAFPSSFFDRFEAITHVWAPYY 239

Query:   234 TIHKIMAGLLDQYTLANNGQALNITIWMADYFNTRVQNLIARSSLERHYQTLNDESGGMN 293
             TIHKI+AGL+DQY LA N QAL +   MADYF  RVQN+I + S+ERH+ +LN+E+GGMN
Sbjct:   240 TIHKILAGLVDQYKLAGNTQALKMATGMADYFYGRVQNVIKKYSVERHWLSLNEETGGMN 299

Query:   294 DVLYKLYGITKDPKHLKLAELFDKPCFLGLLAVKADNIAGLHANTHIPLVCGVQNRYELT 353
             DVLY+LY IT+D K+L LA LFDKPCFLG+LA++AD+I+G HANTHIP+V G Q RYE+T
Sbjct:   300 DVLYQLYSITRDSKYLFLAHLFDKPCFLGVLAIQADDISGFHANTHIPIVVGSQQRYEIT 359

Query:   354 GDEQSMAMGTFFMDIINSSHSYATGGTSHQEFWTDPKRIATALSAETEESCTTYNMLKVS 413
             GD     +  FFMDI+N+SHSYATGGTS +EFW DPKR+AT L  E EESCTTYNMLKVS
Sbjct:   360 GDLLHKEIPMFFMDIVNASHSYATGGTSVKEFWQDPKRMATTLQTENEESCTTYNMLKVS 419

Query:   414 RYLFKWTKQVTYADYYERALTNGVLGIQRGTEPGVMIYMLPLSPGSSKAKSYHGWGDAFD 473
             R LF+WTK+V+YADYYERALTNGVLGIQRGT+PG MIYMLPL  G SKA +YHGWG  +D
Sbjct:   420 RNLFRWTKEVSYADYYERALTNGVLGIQRGTDPGRMIYMLPLGKGVSKAVTYHGWGTPYD 479

Query:   474 SFWCCYGTGIESFAKLGDSIYFEQEGKGPGVYIIQYISSTFDWKAGQIVIHQNVDPVVSW 533
             SFWCCYGTGIESF+KLGDSIYF+++G  P +Y+ QYISS+ DWK+  + I Q V+PVVSW
Sbjct:   480 SFWCCYGTGIESFSKLGDSIYFQEDGATPALYVTQYISSSLDWKSAGLSISQKVNPVVSW 539

Query:   534 DQNLRMALTFTSNK-GPGVSSVLNLRIPFWANPNGGKATLNKDNLQIPSPGNFLSVTRAW 592
             D  +R+  T +S+K G    S LNLRIP W N  G K +LN   L +P+ GNFLS+ + W
Sbjct:   540 DPYMRVTFTLSSSKVGVAKESTLNLRIPVWTNSIGAKVSLNGRPLNVPTSGNFLSIKQKW 599

Query:   593 SPDEKLFIQLPINLRTEAIKDDRPQYASLQAIFYGPYLLAGYSQHDHEIKTGPVKSLSEW 652
                +++ ++LP+++RTEAIKDDRP+YASLQAI YGPYLLAG++  D  I T   K+   W
Sbjct:   600 KSGDQVTMELPMSIRTEAIKDDRPEYASLQAILYGPYLLAGHTSMDWSITT-QAKA-GNW 657

Query:   653 ITPIPASYNAGLVTFSQKSGNSSLVLMK-NQSVTIEPWPAAGTGGDANATFRLIGNDQR- 710
             ITPIP + N+ LVT SQ+SGN S VL   NQ++ ++  P  GT    +ATFRL+ +D + 
Sbjct:   658 ITPIPETLNSHLVTLSQQSGNISYVLSNSNQTIIMKVSPEPGTQDAVSATFRLVTDDSKH 717

Query:   711 PINFTTVKNVISKQVMFEPFDFPGKLLMQQGNNDSLVI-ANNP---GNSVFQVNAGLDGK 766
             PI+  + + +I   VM EPFDFPG ++++Q  + SL + A++P   G+S F++ +GLDGK
Sbjct:   718 PIS--SPEGLIGSLVMLEPFDFPG-MIVKQATDSSLTVQASSPSDKGSSSFRLVSGLDGK 774

Query:   767 PDTVSLESVSRKGCFVFSDVNLKAGTALKLNCQQP--DDGFKQAASFVMQKGISQYHPIS 824
             P +VSL   S+KGCFV+SD  LK GT L+L C     D+ FKQAASF ++ G++QY+P+S
Sbjct:   775 PGSVSLSLESKKGCFVYSDQTLKQGTKLRLECGSAATDEKFKQAASFSLKTGMNQYNPMS 834

Query:   825 FLAKGSNRNYLLAPLLSFRDESYSVYFNI 853
             F+  G+ RN++L+PL S RDE+Y+VYF++
Sbjct:   835 FVMSGTQRNFVLSPLFSLRDETYNVYFSV 863
GO:0003824 "catalytic activity" evidence=IEA
GO:0005576 "extracellular region" evidence=ISM
TAIR|locus:2182280 AT5G12950 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|Q2KGY9 MGCH7_ch7g196 "Putative uncharacterized protein" [Magnaporthe oryzae 70-15 (taxid:242507)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
estExt_fgenesh4_pg.C_LG_I0347
hypothetical protein (858 aa)
(Populus trichocarpa)
Predicted Functional Partners:
gw1.XVI.1041.1
hypothetical protein (662 aa)
  •     0.455
estExt_fgenesh4_pm.C_LG_VI0086
hypothetical protein (670 aa)
  •     0.449
estExt_fgenesh4_pg.C_LG_X0561
alpha-galactosidase (EC-3.2.1.22) (649 aa)
  •     0.408
gw1.VIII.287.1
annotation not avaliable (630 aa)
  •     0.403
gw1.X.5154.1
annotation not avaliable (619 aa)
  •     0.401

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query855
pfam07944511 pfam07944, DUF1680, Putative glycosyl hydrolase of 1e-160
COG3533589 COG3533, COG3533, Uncharacterized protein conserve 7e-68
>gnl|CDD|219654 pfam07944, DUF1680, Putative glycosyl hydrolase of unknown function (DUF1680) Back     alignment and domain information 
 Score =  476 bits (1228), Expect = e-160
 Identities = 194/534 (36%), Positives = 276/534 (51%), Gaps = 33/534 (6%)

Query: 109 DVRLLPNSMHWRAQQTNLEYLVMLDVDRLVWSFRKTAGLPTPGAPYGGWEDQK--MELRG 166
           DVRL   S     QQTN EYL+ LD DRL+ +FR  AGLP     YGGWED+      RG
Sbjct: 1   DVRLTD-SFWGDRQQTNREYLLPLDPDRLLHTFRLEAGLPNKAIAYGGWEDEFPGFPFRG 59

Query: 167 HFLGHYLSATAMAWASTRNETVKQKMDAVMSVLSECQKKIGTGYLSAFPSEFFDRLENLV 226
           H LG +LSA A   AST +  +++++D ++  L+E Q+  G GYL  +P   FDR E   
Sbjct: 60  HDLGKWLSAVAYMLASTPDPELEKRLDRLVDELAEAQQ--GDGYLGTYPESNFDRNEAGN 117

Query: 227 YVWAP---YYTIHKIMAGLLDQYTLANNGQALNITIWMADYFNTRVQNLIARSSLERHYQ 283
             WAP    Y + K++AGL+  Y      QAL++   +AD+    V +++    +++H  
Sbjct: 118 GRWAPNHELYNLGKLIAGLVAYYQATGKRQALDVATRLADWLYD-VTSVLGDEQMQKH-- 174

Query: 284 TLNDESGGMNDVLYKLYGITKDPKHLKLAELFDKPCFLGLLAVKADNIAGLHANTHIP-L 342
            L  E GG+N+ L +LY +T D ++L LA+ F     L  LA   D++ G H NT I   
Sbjct: 175 -LYPEHGGINEALVELYELTGDKRYLDLAKRFIHNRGLDPLAYGQDHLPGRHQNTAIGHA 233

Query: 343 VCGVQNRYELTGDEQSMAMGTFFMDIINSSHSYATGGTS-HQEFWTDPKRIATALSAETE 401
           V G  + YE TGD+  +    FF + + + H Y TGG     E +  P  +   L+    
Sbjct: 234 VRGAADLYEETGDDALLKAAEFFWNNVVTRHMYVTGGNGSRHEHFGPPYDLPNRLA--YC 291

Query: 402 ESCTTYNMLKVSRYLFKWTKQVTYADYYERALTNGVLGIQRGTEPGVMIYMLPLSPGSSK 461
           E+C +YNMLK++R + +WT    YADYYERAL N +L  Q   + G+  Y  PL  G  +
Sbjct: 292 ETCASYNMLKLTRRMLEWTPDAKYADYYERALYNHILAGQSP-DGGMFFYFNPLESGPKR 350

Query: 462 AKSYHGWGDAFDSFWCCYGTGIESFAKLGDSIYFEQEGKGPGVYIIQYISSTFDWKAGQ- 520
            +   G+   +DS WCC G G E+ AK GD IY   +    G+Y+  YI ST DWK    
Sbjct: 351 LR--WGYSTPWDSCWCCPGNGAETHAKFGDYIYTHSD---DGLYVNLYIPSTADWKLKGG 405

Query: 521 -IVIHQNVDPVVSWDQNLRMALTFTSNKGPGVSSVLNLRIPFWANPNGGKATLN-KDNLQ 578
            + + Q  +    WD  +R     T          L LRIP WA   G   T+N K  + 
Sbjct: 406 EVTLRQETN--YPWDGQVR----LTVKTAKPAEFTLYLRIPGWA--AGATLTVNGKPVVV 457

Query: 579 IPSPGNFLSVTRAWSPDEKLFIQLPINLRTEAIKDDRPQYASLQAIFYGPYLLA 632
            P    +LS+TR W   +++ + LP+ +R EA     P  A+  A+  GP +L 
Sbjct: 458 QPKSDGYLSITREWKKGDRVELTLPMPVRLEAANPLVPDDANKVAVLRGPLVLC 511

The members of this family are sequences derived from hypothetical bacterial and eukaryotic proteins of unknown function. One members of this family is annotated as a possible arabinosidase, but no references were found to back this. These proteins are related to a large family of glycosyl hydrolases. Length = 511
>gnl|CDD|226063 COG3533, COG3533, Uncharacterized protein conserved in bacteria [Function unknown] Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 855
PF07944520 DUF1680: Putative glycosyl hydrolase of unknown fu 100.0
COG3533589 Uncharacterized protein conserved in bacteria [Fun 100.0
PF05270142 AbfB: Alpha-L-arabinofuranosidase B (ABFB); InterP 99.56
PF05270142 AbfB: Alpha-L-arabinofuranosidase B (ABFB); InterP 99.16
cd00249384 AGE AGE domain; N-acyl-D-glucosamine 2-epimerase d 98.93
cd00249384 AGE AGE domain; N-acyl-D-glucosamine 2-epimerase d 98.25
PF03663370 Glyco_hydro_76: Glycosyl hydrolase family 76 ; Int 98.23
PF07944520 DUF1680: Putative glycosyl hydrolase of unknown fu 98.0
PF03663370 Glyco_hydro_76: Glycosyl hydrolase family 76 ; Int 97.94
COG1331667 Highly conserved protein containing a thioredoxin 97.89
COG3533589 Uncharacterized protein conserved in bacteria [Fun 97.87
COG1331667 Highly conserved protein containing a thioredoxin 97.82
PF07470336 Glyco_hydro_88: Glycosyl Hydrolase Family 88; Inte 97.62
cd04791321 LanC_SerThrkinase Lanthionine synthetase C-like do 97.48
cd04791321 LanC_SerThrkinase Lanthionine synthetase C-like do 97.38
PF07221346 GlcNAc_2-epim: N-acylglucosamine 2-epimerase (GlcN 97.0
PF07221346 GlcNAc_2-epim: N-acylglucosamine 2-epimerase (GlcN 96.9
PTZ00470522 glycoside hydrolase family 47 protein; Provisional 96.65
cd04792825 LanM-like LanM-like proteins. LanM is a bifunction 96.5
PF01532452 Glyco_hydro_47: Glycosyl hydrolase family 47; Inte 96.33
cd04434343 LanC_like LanC-like proteins. LanC is the cyclase 96.13
cd04794343 euk_LANCL eukaryotic Lanthionine synthetase C-like 95.95
COG4403963 LcnDR2 Lantibiotic modifying enzyme [Defense mecha 95.74
COG4225357 Predicted unsaturated glucuronyl hydrolase involve 95.53
PF06662189 C5-epim_C: D-glucuronyl C5-epimerase C-terminus; I 95.41
PF06662189 C5-epim_C: D-glucuronyl C5-epimerase C-terminus; I 95.17
cd04792825 LanM-like LanM-like proteins. LanM is a bifunction 95.13
PF07470336 Glyco_hydro_88: Glycosyl Hydrolase Family 88; Inte 94.75
PF00759444 Glyco_hydro_9: Glycosyl hydrolase family 9; InterP 94.65
COG4225357 Predicted unsaturated glucuronyl hydrolase involve 94.37
cd04434343 LanC_like LanC-like proteins. LanC is the cyclase 94.28
PLN02175484 endoglucanase 93.93
cd04794343 euk_LANCL eukaryotic Lanthionine synthetase C-like 93.91
COG2942388 N-acyl-D-glucosamine 2-epimerase [Carbohydrate tra 93.88
KOG2787403 consensus Lanthionine synthetase C-like protein 1 93.81
cd04793382 LanC LanC is the cyclase enzyme of the lanthionine 93.67
PTZ00470522 glycoside hydrolase family 47 protein; Provisional 93.4
PF06917557 Pectate_lyase_2: Periplasmic pectate lyase; InterP 92.8
KOG2244786 consensus Highly conserved protein containing a th 92.06
cd04793382 LanC LanC is the cyclase enzyme of the lanthionine 90.41
PLN02345469 endoglucanase 90.39
COG2942388 N-acyl-D-glucosamine 2-epimerase [Carbohydrate tra 89.79
KOG2244786 consensus Highly conserved protein containing a th 89.08
KOG2429622 consensus Glycosyl hydrolase, family 47 [Carbohydr 88.2
PF01532452 Glyco_hydro_47: Glycosyl hydrolase family 47; Inte 87.84
PLN02171629 endoglucanase 87.48
PLN02266510 endoglucanase 84.67
PLN02909486 Endoglucanase 83.49
PF05147355 LANC_like: Lanthionine synthetase C-like protein; 82.81
PLN02340614 endoglucanase 81.75
>PF07944 DUF1680: Putative glycosyl hydrolase of unknown function (DUF1680); InterPro: IPR012878 The members of this family are sequences derived from hypothetical bacterial and eukaryotic proteins of unknown function Back     alignment and domain information 
Probab=100.00  E-value=2.2e-111  Score=981.12  Aligned_cols=499  Identities=36%  Similarity=0.630  Sum_probs=455.7

Q ss_pred             CeEecCCCccHHHHHHHHhhhhccccchhhHhHHHhcCCCCCCCCCCCcc--cCCcccccchhhHHHHHHHHHHHhCCCh
Q 043003          109 DVRLLPNSMHWRAQQTNLEYLVMLDVDRLVWSFRKTAGLPTPGAPYGGWE--DQKMELRGHFLGHYLSATAMAWASTRNE  186 (855)
Q Consensus       109 ~VrL~~~~~~~~~~~~~~~yll~ld~drLL~nFR~~AGl~~~g~~~gGWe--~~dsdlrGH~~Gh~LsA~A~~~a~t~D~  186 (855)
                      +|+|+ ++||+++|+++++|++++++|||+++||..|||+.++.++||||  ++++.++||++||||||+|++|+.++|+
T Consensus         1 ~V~l~-~~~~~~~~~~~~~~~l~~~~d~ll~~~r~~agl~~~~~~~g~we~~~~~~~~~~~~~g~wl~a~a~~~~~~~D~   79 (520)
T PF07944_consen    1 DVRLT-DGFWKRRQELNRAYLLPLDPDRLLYNFRSHAGLPNFAIAYGGWEGEFPGWWFRGHDVGKWLEAAAYAYAYTGDP   79 (520)
T ss_pred             CeEEC-cHHHHHHHHHHHHHHHHhHHHHHhhhcCcccCCCCccccCCCCccCCCCCccCCCcHHHHHHHHHHHHHHCCCH
Confidence            79999 58999999999999999999999999999999999888999999  8899999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHhhCCCcccccCCchhhhhhhcccccccc----chhhHHHHHHHHHHHHHhCChhHHHHHHHHH
Q 043003          187 TVKQKMDAVMSVLSECQKKIGTGYLSAFPSEFFDRLENLVYVWAP----YYTIHKIMAGLLDQYTLANNGQALNITIWMA  262 (855)
Q Consensus       187 ~L~~k~d~~Vd~L~~~Q~~~~DGYL~a~~~~~~~r~~~l~~~w~p----yy~~HkI~aGLld~Y~~TG~~kaL~ia~r~A  262 (855)
                      +|++|++++|+.|.+||+  +||||+++++..   ..+.+..|+|    +|+.|||+.||+|+|++||++++|++|+|+|
T Consensus        80 ~l~~~~d~~V~~l~~~Q~--~dGYl~~~~~~~---~~~~~~~w~~~~he~Y~~~~ll~gl~~~y~~tG~~~~L~v~~k~a  154 (520)
T PF07944_consen   80 ELKAKADEIVDELAAAQQ--PDGYLGTYPEER---NFNPDDRWAPDMHELYCLGKLLEGLIDYYEATGNERALDVATKLA  154 (520)
T ss_pred             HHHHHHHHHHHHHHHhcc--CCceeccccccc---ccccccCCCCCccceehHhHHHHHHHHHHHHHCcHHHHHHHHHHH
Confidence            999999999999999999  999999998653   1134567777    8899999999999999999999999999999


Q ss_pred             HHHHHHhhhhhhccchhhhcccccccccchHHHHHHHHHhcCCHHHHHHHHhccccccccc--cccccCCCCCCcccCcc
Q 043003          263 DYFNTRVQNLIARSSLERHYQTLNDESGGMNDVLYKLYGITKDPKHLKLAELFDKPCFLGL--LAVKADNIAGLHANTHI  340 (855)
Q Consensus       263 D~~~~r~~~~~~~~~~~~~~~~l~~E~GGmneaL~~LY~~TGd~ryL~LA~~F~~~~~~~~--la~~~d~l~g~Hanthi  340 (855)
                      ||+.++...    +..+.....+.+|+|||+++|++||++|||++||+||++|++..++++  +..+.|.+.+.|+|+++
T Consensus       155 d~~~~~~~~----~~~~~~~~~~~~~~~~i~~~l~~LY~~Tgd~~yL~lA~~f~~~~~~~~~~~~~~~d~~~~~~a~~~~  230 (520)
T PF07944_consen  155 DWVYRRLSR----LGPEPGQKMGYPEHGGINEALVRLYEITGDERYLDLAEYFVDQRGFDPYDLAYGQDHLPGRHANTHI  230 (520)
T ss_pred             HHHHHHhcc----CCHHHhhcccccccchHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCCchhhcCccCCCcccccee
Confidence            999665543    222333445567899999999999999999999999999999988888  88889999999999999


Q ss_pred             hHhH-------HHHHHHHHhCChHHHHHHHHHHHHhcccCeEeecCCCCC---CCCCCCccccccCCcCccccchhhHHH
Q 043003          341 PLVC-------GVQNRYELTGDEQSMAMGTFFMDIINSSHSYATGGTSHQ---EFWTDPKRIATALSAETEESCTTYNML  410 (855)
Q Consensus       341 P~~~-------G~a~~Y~~TGD~~y~~aa~~fwd~V~~~~~Y~TGG~g~~---E~f~~~~~l~~~l~~~~~ETCat~nml  410 (855)
                      |.++       |++++|++|||++|++++++||++|+++|||+|||+|++   |+|++++++|+  ...++|||++||||
T Consensus       231 ~h~vr~~y~~~g~a~~y~~tgd~~~~~a~~~~w~~v~~~~~y~tGg~g~~~~~E~f~~~~~lp~--~~~~~EtCas~~~~  308 (520)
T PF07944_consen  231 GHAVRAMYLYSGAADLYEETGDEEYLDAAENFWDNVVRHHMYATGGIGSDHEGEHFGPPYDLPN--RLAYAETCASVNMM  308 (520)
T ss_pred             eEEEEhhhhhhHHHHHHHHhCCHHHHHHHHHHHHHHHhcCeeccCCCcCCCCCccCCCCCCCCc--CCCCccccHHHHHH
Confidence            9998       999999999999999999999999999999999999998   99999999998  45679999999999


Q ss_pred             HHHHHHHccCCcchHHHHHHHHHhhhhcccCCCCCCCeEEEecCCCCCCCCCccCCCCCCCCCCcccCCCCccchhhhcc
Q 043003          411 KVSRYLFKWTKQVTYADYYERALTNGVLGIQRGTEPGVMIYMLPLSPGSSKAKSYHGWGDAFDSFWCCYGTGIESFAKLG  490 (855)
Q Consensus       411 kl~~~Lf~~tgd~~YaD~~ERaLyN~iLa~q~~~d~g~~~Y~~PL~~g~~k~~~~~~~g~p~~~f~CC~gtg~e~~akl~  490 (855)
                      +|+++||++|||++|+|+|||++||++||+|++ |+++++|+|||+++..|... ..+.+++++||||+||++|+++||+
T Consensus       309 ~~~~~L~~~tgd~~yaD~~Er~lyN~~la~~~~-d~~~~~Y~~pl~~~~~~~~~-~~~~~~~~~~~CC~~n~~r~~~~~~  386 (520)
T PF07944_consen  309 KLARRLFRLTGDARYADYYERALYNALLAGQSP-DGGSFFYFNPLNSGPYKHRW-KNYRTPWFSFWCCPGNGARGWAKLP  386 (520)
T ss_pred             HHHHHHHhcCCCchHHHHHHHHHhcccccccCC-CCCeeEEecCCccCcCcccc-ccccCCCCCCCCCcchHHHHHHHHh
Confidence            999999999999999999999999999999987 99999999999988755321 2466788899999999999999999


Q ss_pred             cceeEeecCCCCcEEEEEeeceEEEeeecc--EEEEEEeCCCCCCCCCeeEEEEEEeCCCCCeeeEEEEeecCCcCCCCc
Q 043003          491 DSIYFEQEGKGPGVYIIQYISSTFDWKAGQ--IVIHQNVDPVVSWDQNLRMALTFTSNKGPGVSSVLNLRIPFWANPNGG  568 (855)
Q Consensus       491 ~~iY~~~~~~~~~LyVnLYipS~l~~~~~g--v~i~q~T~~pyp~~~~~~V~ltV~~~~~~~~~ftL~LRIP~Wa~~~~~  568 (855)
                      ++||++++   ++||||||+||+++|+.++  |+|+|+|+||  |++  +|+|+|++.  ++.+|+|+||||+||+  ++
T Consensus       387 ~~iy~~~~---~~l~v~ly~~s~~~~~~~~~~v~i~q~T~yP--~~~--~v~i~v~~~--~~~~f~l~lRIP~Wa~--~~  455 (520)
T PF07944_consen  387 DYIYFRDD---DGLYVNLYIPSELTWPVGGGTVTITQETDYP--FEG--TVRITVSPD--KPVPFTLRLRIPSWAK--GA  455 (520)
T ss_pred             hhheEecC---CEEEEEEEcceEEEEEECCcEEEEEEecCCC--CCC--CEEEEEEcC--CCccEEEEEEccCCCC--Cc
Confidence            99999985   6999999999999999887  9999999955  777  899999874  4788999999999998  79


Q ss_pred             eEEECCcc-ccCCCCCCeEEEEeecCCCCEEEEEecceeEEEecCCCcccccCeEEEeecceeEE
Q 043003          569 KATLNKDN-LQIPSPGNFLSVTRAWSPDEKLFIQLPINLRTEAIKDDRPQYASLQAIFYGPYLLA  632 (855)
Q Consensus       569 ~i~VNG~~-~~~~~~ggY~~I~R~Wk~GD~V~L~LPm~lr~~~~~d~~~~~~~~vAv~rGPlVla  632 (855)
                      +|+|||++ .....++||++|+|+|++||+|+|+|||++|++++++.+++..+++||+|||||||
T Consensus       456 ~i~vNG~~~~~~~~~~gy~~i~r~W~~gD~v~l~lpm~~r~~~~~~~~~~~~~~vAv~rGPlV~a  520 (520)
T PF07944_consen  456 TIRVNGEPVVDTAVPGGYLTIEREWKDGDVVELRLPMEVRLEPANPRVPDDPGRVAVMRGPLVYA  520 (520)
T ss_pred             EEEECCEeCCCCcCCCCeEEEEeeccCCcEEEEEecCeeEEEeCCCCCccCCCeEEEEeCchhcC
Confidence            99999999 55567999999999999999999999999999999666666688999999999998

One member of this family is annotated as a possible arabinosidase, but no references were found to back this.
>COG3533 Uncharacterized protein conserved in bacteria [Function unknown] Back     alignment and domain information
>PF05270 AbfB: Alpha-L-arabinofuranosidase B (ABFB); InterPro: IPR007934 This family consists of several fungal alpha-L-arabinofuranosidase B proteins Back     alignment and domain information
>PF05270 AbfB: Alpha-L-arabinofuranosidase B (ABFB); InterPro: IPR007934 This family consists of several fungal alpha-L-arabinofuranosidase B proteins Back     alignment and domain information
>cd00249 AGE AGE domain; N-acyl-D-glucosamine 2-epimerase domain; Responsible for intermediate epimerization during biosynthesis of N-acetylneuraminic acid Back     alignment and domain information
>cd00249 AGE AGE domain; N-acyl-D-glucosamine 2-epimerase domain; Responsible for intermediate epimerization during biosynthesis of N-acetylneuraminic acid Back     alignment and domain information
>PF03663 Glyco_hydro_76: Glycosyl hydrolase family 76 ; InterPro: IPR005198 O-Glycosyl hydrolases 3 Back     alignment and domain information
>PF07944 DUF1680: Putative glycosyl hydrolase of unknown function (DUF1680); InterPro: IPR012878 The members of this family are sequences derived from hypothetical bacterial and eukaryotic proteins of unknown function Back     alignment and domain information
>PF03663 Glyco_hydro_76: Glycosyl hydrolase family 76 ; InterPro: IPR005198 O-Glycosyl hydrolases 3 Back     alignment and domain information
>COG1331 Highly conserved protein containing a thioredoxin domain [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>COG3533 Uncharacterized protein conserved in bacteria [Function unknown] Back     alignment and domain information
>COG1331 Highly conserved protein containing a thioredoxin domain [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PF07470 Glyco_hydro_88: Glycosyl Hydrolase Family 88; InterPro: IPR010905 Unsaturated glucuronyl hydrolase catalyses the hydrolytic release of unsaturated glucuronic acids from oligosaccharides produced by the reactions of polysaccharide lyases [] Back     alignment and domain information
>cd04791 LanC_SerThrkinase Lanthionine synthetase C-like domain associated with serine threonine kinases Back     alignment and domain information
>cd04791 LanC_SerThrkinase Lanthionine synthetase C-like domain associated with serine threonine kinases Back     alignment and domain information
>PF07221 GlcNAc_2-epim: N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase); InterPro: IPR010819 N-acylglucosamine 2-epimerase (AGE, 5 Back     alignment and domain information
>PF07221 GlcNAc_2-epim: N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase); InterPro: IPR010819 N-acylglucosamine 2-epimerase (AGE, 5 Back     alignment and domain information
>PTZ00470 glycoside hydrolase family 47 protein; Provisional Back     alignment and domain information
>cd04792 LanM-like LanM-like proteins Back     alignment and domain information
>PF01532 Glyco_hydro_47: Glycosyl hydrolase family 47; InterPro: IPR001382 O-Glycosyl hydrolases 3 Back     alignment and domain information
>cd04434 LanC_like LanC-like proteins Back     alignment and domain information
>cd04794 euk_LANCL eukaryotic Lanthionine synthetase C-like protein Back     alignment and domain information
>COG4403 LcnDR2 Lantibiotic modifying enzyme [Defense mechanisms] Back     alignment and domain information
>COG4225 Predicted unsaturated glucuronyl hydrolase involved in regulation of bacterial surface properties, and related proteins [General function prediction only] Back     alignment and domain information
>PF06662 C5-epim_C: D-glucuronyl C5-epimerase C-terminus; InterPro: IPR010598 This entry consists of known or predicted D-glucuronyl C5-epimerases which share a common C-terminal region Back     alignment and domain information
>PF06662 C5-epim_C: D-glucuronyl C5-epimerase C-terminus; InterPro: IPR010598 This entry consists of known or predicted D-glucuronyl C5-epimerases which share a common C-terminal region Back     alignment and domain information
>cd04792 LanM-like LanM-like proteins Back     alignment and domain information
>PF07470 Glyco_hydro_88: Glycosyl Hydrolase Family 88; InterPro: IPR010905 Unsaturated glucuronyl hydrolase catalyses the hydrolytic release of unsaturated glucuronic acids from oligosaccharides produced by the reactions of polysaccharide lyases [] Back     alignment and domain information
>PF00759 Glyco_hydro_9: Glycosyl hydrolase family 9; InterPro: IPR001701 O-Glycosyl hydrolases 3 Back     alignment and domain information
>COG4225 Predicted unsaturated glucuronyl hydrolase involved in regulation of bacterial surface properties, and related proteins [General function prediction only] Back     alignment and domain information
>cd04434 LanC_like LanC-like proteins Back     alignment and domain information
>PLN02175 endoglucanase Back     alignment and domain information
>cd04794 euk_LANCL eukaryotic Lanthionine synthetase C-like protein Back     alignment and domain information
>COG2942 N-acyl-D-glucosamine 2-epimerase [Carbohydrate transport and metabolism] Back     alignment and domain information
>KOG2787 consensus Lanthionine synthetase C-like protein 1 [Defense mechanisms] Back     alignment and domain information
>cd04793 LanC LanC is the cyclase enzyme of the lanthionine synthetase Back     alignment and domain information
>PTZ00470 glycoside hydrolase family 47 protein; Provisional Back     alignment and domain information
>PF06917 Pectate_lyase_2: Periplasmic pectate lyase; InterPro: IPR010702 This family consists of several Enterobacterial periplasmic pectate lyase proteins Back     alignment and domain information
>KOG2244 consensus Highly conserved protein containing a thioredoxin domain [General function prediction only] Back     alignment and domain information
>cd04793 LanC LanC is the cyclase enzyme of the lanthionine synthetase Back     alignment and domain information
>PLN02345 endoglucanase Back     alignment and domain information
>COG2942 N-acyl-D-glucosamine 2-epimerase [Carbohydrate transport and metabolism] Back     alignment and domain information
>KOG2244 consensus Highly conserved protein containing a thioredoxin domain [General function prediction only] Back     alignment and domain information
>KOG2429 consensus Glycosyl hydrolase, family 47 [Carbohydrate transport and metabolism] Back     alignment and domain information
>PF01532 Glyco_hydro_47: Glycosyl hydrolase family 47; InterPro: IPR001382 O-Glycosyl hydrolases 3 Back     alignment and domain information
>PLN02171 endoglucanase Back     alignment and domain information
>PLN02266 endoglucanase Back     alignment and domain information
>PLN02909 Endoglucanase Back     alignment and domain information
>PF05147 LANC_like: Lanthionine synthetase C-like protein; InterPro: IPR007822 The LanC-like protein superfamily encompasses a highly divergent group of peptide-modifying enzymes, including the eukaryotic and bacterial lanthionine synthetase C-like proteins (LanC) [, , ]; subtilin biosynthesis protein SpaC from Bacillus subtilis [, ]; epidermin biosynthesis protein EpiC from Staphylococcus epidermidis []; nisin biosynthesis protein NisC from Lactococcus lactis [, , ]; GCR2 from Arabidopsis thaliana []; and many others Back     alignment and domain information
>PLN02340 endoglucanase Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query855
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 3e-08
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-04
3kmv_A157 Alpha-L-arabinofuranosidase B; protein:carboydrate 1e-06
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
 Score = 56.4 bits (135), Expect = 3e-08
 Identities = 69/506 (13%), Positives = 147/506 (29%), Gaps = 151/506 (29%)

Query: 53  KEMLSSYQLRSPANEGPEASK----FQAAEEKFDNTMLRNTNATGDFKLPGDFLKEVSLH 108
           K +LS  ++          S     F     K +  + +             F++EV   
Sbjct: 43  KSILSKEEIDHIIMSKDAVSGTLRLFWTLLSKQEEMVQK-------------FVEEVLRI 89

Query: 109 DVRLLPNSMHWRAQQTNLEYLVMLD-VDRLVWSFRKTAGLPTPGAPYGGW-EDQKMELRG 166
           + + L + +    +Q ++   + ++  DRL              A Y        ++LR 
Sbjct: 90  NYKFLMSPIKTEQRQPSMMTRMYIEQRDRL-------YNDNQVFAKYNVSRLQPYLKLRQ 142

Query: 167 HFL----GHYLSA--------TAMAWASTRNETVKQKMD-AV--MSVLSECQKKIGTGYL 211
             L       +          T +A     +  V+ KMD  +  +++   C         
Sbjct: 143 ALLELRPAKNVLIDGVLGSGKTWVALDVCLSYKVQCKMDFKIFWLNL-KNCNS------- 194

Query: 212 SAFPSEFFDRLENLVYVWAPYYT------------IHKIMAGLLDQYTLANNGQALNI-- 257
              P    + L+ L+Y   P +T            IH I A L            L +  
Sbjct: 195 ---PETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLL 251

Query: 258 ---TIWMADYFN--------TRVQNLI-ARSSLERHYQTLNDESGGMNDVLYKLYGITKD 305
                   + FN        TR + +    S+    + +L+  S  +          T D
Sbjct: 252 NVQNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTL----------TPD 301

Query: 306 PKHLKLAELFDKPCFLGLLAVKADNIAGLHANTHIPLVCGV--------QNRYE----LT 353
               ++  L  K  +L     +  ++      T  P    +           ++    + 
Sbjct: 302 ----EVKSLLLK--YLD---CRPQDLP-REVLTTNPRRLSIIAESIRDGLATWDNWKHVN 351

Query: 354 GDEQSMAMGTFFMDIINSSHSYATGGTSHQEFWTD----PK--RIATAL------SAETE 401
            D+ +  + +   +++  +         +++ +      P    I T L           
Sbjct: 352 CDKLTTIIESSL-NVLEPA--------EYRKMFDRLSVFPPSAHIPTILLSLIWFDVIKS 402

Query: 402 ESCTTYNMLKVSRYLFKWTKQVTYADYYERALTNGVLGIQRGTEPGV---MI--YMLPLS 456
           +     N L     + K  K+ T +      L    L ++   E  +   ++  Y +P  
Sbjct: 403 DVMVVVNKLHKYSLVEKQPKESTIS-IPSIYL---ELKVKLENEYALHRSIVDHYNIP-- 456

Query: 457 PGSSKAKSYHGWG---DAFDSFWCCY 479
                 K++          D ++  +
Sbjct: 457 ------KTFDSDDLIPPYLDQYFYSH 476
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>3kmv_A Alpha-L-arabinofuranosidase B; protein:carboydrate interactions, carbohydrate-binding modul trefoil fold, CBM42, sugar binding protein; 1.80A {Clostridium thermocellum} Length = 157 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query855
3kmv_A157 Alpha-L-arabinofuranosidase B; protein:carboydrate 99.76
1wd3_A482 Alpha-L-arabinofuranosidase B; beta-sandwich, beta 99.75
3kmv_A157 Alpha-L-arabinofuranosidase B; protein:carboydrate 99.58
3akh_A468 Putative secreted alpha L-arabinofuranosidase II; 99.11
2ahf_A377 Unsaturated glucuronyl hydrolase; alpha6/alpha6 ba 99.11
2zzr_A397 Unsaturated glucuronyl hydrolase; alpha barrel; 1. 99.1
1wd3_A482 Alpha-L-arabinofuranosidase B; beta-sandwich, beta 99.04
3akh_A468 Putative secreted alpha L-arabinofuranosidase II; 98.91
2gz6_A388 N-acetyl-D-glucosamine 2-epimerase; anabaena SP. C 98.86
3k7x_A349 LIN0763 protein; Q92DQ0, LKR23, NESG, structural g 98.82
3k7x_A349 LIN0763 protein; Q92DQ0, LKR23, NESG, structural g 98.66
3pmm_A382 Putative cytoplasmic protein; structural genomics, 98.65
3gt5_A402 N-acetylglucosamine 2-epimerase; structural genomi 98.48
2gz6_A388 N-acetyl-D-glucosamine 2-epimerase; anabaena SP. C 98.35
1nc5_A373 Hypothetical protein YTER; structural genomics, he 98.34
3gt5_A402 N-acetylglucosamine 2-epimerase; structural genomi 98.27
2zbl_A421 Putative isomerase; N-acyl-D-glucosamine 2-epimera 98.26
3k11_A445 Putative glycosyl hydrolase; structural genomics, 98.16
2ahf_A377 Unsaturated glucuronyl hydrolase; alpha6/alpha6 ba 98.05
1fp3_A402 N-acyl-D-glucosamine 2-epimerase; alpha/alpha-barr 97.97
3pmm_A382 Putative cytoplasmic protein; structural genomics, 97.91
2zzr_A397 Unsaturated glucuronyl hydrolase; alpha barrel; 1. 97.85
1nc5_A373 Hypothetical protein YTER; structural genomics, he 97.82
2zbl_A421 Putative isomerase; N-acyl-D-glucosamine 2-epimera 97.76
1fp3_A402 N-acyl-D-glucosamine 2-epimerase; alpha/alpha-barr 97.58
3h7l_A586 Endoglucanase; dehydrogenase, PSI-2, NYSGXRC, stru 97.45
3k11_A445 Putative glycosyl hydrolase; structural genomics, 96.53
1nxc_A478 Mannosyl-oligosaccharide 1,2-alpha-mannosidase IA; 96.47
1ks8_A433 Endo-B-1,4-glucanase; cellulase, endoglucanase, te 96.08
1dl2_A511 Class I alpha-1,2-mannosidase; alpha-alpha helix b 95.83
3e6u_A411 LANC-like protein 1; alpha barrel, cytoplasm, sign 95.82
1ia6_A441 Cellulase CEL9M; cellullase, alpha barrel, hydrola 95.39
1x9d_A538 Endoplasmic reticulum mannosyl-oligosaccharide 1, 95.1
1tf4_A605 T. fusca endo/EXO-cellulase E4 catalytic domain an 94.53
3e6u_A411 LANC-like protein 1; alpha barrel, cytoplasm, sign 94.25
2xfg_A466 Endoglucanase 1; hydrolase-sugar binding protein c 94.1
1g87_A614 Endocellulase 9G; endoglucanase, cellulose binding 94.01
1nxc_A478 Mannosyl-oligosaccharide 1,2-alpha-mannosidase IA; 93.76
1hcu_A503 Alpha-1,2-mannosidase; glycosylation, glycosyl hyd 93.67
2ri9_A475 Mannosyl-oligosaccharide alpha-1,2-mannosidase; al 93.1
1x9d_A538 Endoplasmic reticulum mannosyl-oligosaccharide 1, 92.15
1dl2_A511 Class I alpha-1,2-mannosidase; alpha-alpha helix b 91.03
2ri9_A475 Mannosyl-oligosaccharide alpha-1,2-mannosidase; al 90.84
3gzk_A537 Cellulase; fold from GH9 from CAZY database, glyco 90.58
2g0d_A409 Nisin biosynthesis protein NISC; alpha toroid, alp 89.03
1hcu_A503 Alpha-1,2-mannosidase; glycosylation, glycosyl hyd 88.68
1clc_A639 Endoglucanase CELD; EC: 3.2.1.4; cellulase, glycos 86.07
1ut9_A609 Cellulose 1,4-beta-cellobiosidase; hydrolase, glyc 86.02
2yik_A611 Endoglucanase; hydrolase; 2.10A {Clostridium therm 85.59
2g0d_A409 Nisin biosynthesis protein NISC; alpha toroid, alp 84.96
2v8i_A543 Pectate lyase; periplasm, beta-elimination, pectin 81.49
3h7l_A586 Endoglucanase; dehydrogenase, PSI-2, NYSGXRC, stru 81.19
>3kmv_A Alpha-L-arabinofuranosidase B; protein:carboydrate interactions, carbohydrate-binding modul trefoil fold, CBM42, sugar binding protein; 1.80A {Clostridium thermocellum} Back     alignment and structure
Probab=99.76  E-value=9.7e-19  Score=171.68  Aligned_cols=110  Identities=21%  Similarity=0.324  Sum_probs=96.8

Q ss_pred             CcceecCCCCCCCcceecccCCcceEEecC---CCCceEEEeecCCCCC-CeEEEeecCCCCeEEEeccccCCCceEEEe
Q 043003          722 SKQVMFEPFDFPGKLLMQQGNNDSLVIANN---PGNSVFQVNAGLDGKP-DTVSLESVSRKGCFVFSDVNLKAGTALKLN  797 (855)
Q Consensus       722 g~~v~lepfd~Pg~~v~~~~~~~~l~v~~~---~~~s~f~~vpgl~g~~-~~vsles~~~pg~~~~~~~~~~~g~~~~~~  797 (855)
                      ++.|+||+++.||+||||+  +..++++.+   .+|++|+|||||++++ |+|||||+++||+|||+     .|..|+|+
T Consensus         8 ~~~vsl~S~n~p~~ylRh~--~~~~~~~~~~~~~~datF~vvpGLa~~~~g~VSfES~n~Pg~yLRh-----~~~~l~L~   80 (157)
T 3kmv_A            8 ITKAKFQSYNYPNMYIRHA--NFDARIDENVTPEMDSQWELVPGLANSGDGYVSIQSVNYPGYYLRH-----SNYDLSLE   80 (157)
T ss_dssp             --CBEEEESSSTTCEEEEE--TTEEEEESSCSSGGGGCEEEEECSSCCSTTEEEEEESSSTTEEEEE-----ETTEEEEE
T ss_pred             CccEEEEecCCCCcEEEEe--CCeEEEccCCCCccCceEEEeCCcCCCCCCEEEEEECCCCCcEEEE-----eCCEEEEe
Confidence            4589999999999999995  555666543   4899999999998765 89999999999999998     38899999


Q ss_pred             ecCCCcccccccceecccCccccCcceEEEecCCCceeccc
Q 043003          798 CQQPDDGFKQAASFVMQKGISQYHPISFLAKGSNRNYLLAP  838 (855)
Q Consensus       798 ~~~~~~~f~~~asf~~~~gl~~~~~~sf~a~g~~~~~l~~p  838 (855)
                      +.++++.|+++|+|...+||++..++||++...++.||..=
T Consensus        81 ~~~~s~~f~~dATF~~~~GLa~~~~vSfeS~n~Pg~yLrh~  121 (157)
T 3kmv_A           81 KNDGTSLFAESATFKIVPGLADPSYISFQSYNFPTRYIRHY  121 (157)
T ss_dssp             ECCSCHHHHHTTCEEEEECSSCTTSEEEEESSSTTEEEEEE
T ss_pred             ccCCCCCccCCceEEEccCccCCCcEEEEEEcCCCeEEEEE
Confidence            98888899999999999999999999999999999999873
>1wd3_A Alpha-L-arabinofuranosidase B; beta-sandwich, beta-trefoil, hydrolase; HET: NAG; 1.75A {Aspergillus kawachii} SCOP: b.29.1.21 b.42.8.1 PDB: 1wd4_A* 2d44_A* 2d43_A* Back     alignment and structure
>3kmv_A Alpha-L-arabinofuranosidase B; protein:carboydrate interactions, carbohydrate-binding modul trefoil fold, CBM42, sugar binding protein; 1.80A {Clostridium thermocellum} Back     alignment and structure
>3akh_A Putative secreted alpha L-arabinofuranosidase II; five-bladed beta propeller, beta-trefoil, hydrolase; HET: AHR; 1.70A {Streptomyces avermitilis} PDB: 3akf_A* 3akg_A* 3aki_A* Back     alignment and structure
>2ahf_A Unsaturated glucuronyl hydrolase; alpha6/alpha6 barrel, glycoside hydrolase family 88; 1.52A {Bacillus SP} PDB: 2ahg_A* 2fv0_A* 2fv1_A* 2d5j_A 1vd5_A 2fuz_A Back     alignment and structure
>2zzr_A Unsaturated glucuronyl hydrolase; alpha barrel; 1.75A {Streptococcus agalactiae} PDB: 3anj_A 3ank_A* 3ani_A* Back     alignment and structure
>1wd3_A Alpha-L-arabinofuranosidase B; beta-sandwich, beta-trefoil, hydrolase; HET: NAG; 1.75A {Aspergillus kawachii} SCOP: b.29.1.21 b.42.8.1 PDB: 1wd4_A* 2d44_A* 2d43_A* Back     alignment and structure
>3akh_A Putative secreted alpha L-arabinofuranosidase II; five-bladed beta propeller, beta-trefoil, hydrolase; HET: AHR; 1.70A {Streptomyces avermitilis} PDB: 3akf_A* 3akg_A* 3aki_A* Back     alignment and structure
>2gz6_A N-acetyl-D-glucosamine 2-epimerase; anabaena SP. CH1, isomer; 2.00A {Anabaena SP} Back     alignment and structure
>3k7x_A LIN0763 protein; Q92DQ0, LKR23, NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 1.89A {Listeria innocua} Back     alignment and structure
>3k7x_A LIN0763 protein; Q92DQ0, LKR23, NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 1.89A {Listeria innocua} Back     alignment and structure
>3pmm_A Putative cytoplasmic protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics; 1.90A {Klebsiella pneumoniae subsp} PDB: 3qwt_A Back     alignment and structure
>3gt5_A N-acetylglucosamine 2-epimerase; structural genomics, isomerase, PSI-2; 1.70A {Xylella fastidiosa} Back     alignment and structure
>2gz6_A N-acetyl-D-glucosamine 2-epimerase; anabaena SP. CH1, isomer; 2.00A {Anabaena SP} Back     alignment and structure
>1nc5_A Hypothetical protein YTER; structural genomics, helix barrel, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.60A {Bacillus subtilis} SCOP: a.102.1.6 PDB: 2d8l_A* 2gh4_A* Back     alignment and structure
>3gt5_A N-acetylglucosamine 2-epimerase; structural genomics, isomerase, PSI-2; 1.70A {Xylella fastidiosa} Back     alignment and structure
>2zbl_A Putative isomerase; N-acyl-D-glucosamine 2-epimerase protein family; HET: BMA; 1.60A {Salmonella typhimurium} PDB: 2afa_A 2rgk_A* Back     alignment and structure
>3k11_A Putative glycosyl hydrolase; structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; HET: MSE MES; 1.80A {Bacteroides thetaiotaomicron vpi-5482} Back     alignment and structure
>2ahf_A Unsaturated glucuronyl hydrolase; alpha6/alpha6 barrel, glycoside hydrolase family 88; 1.52A {Bacillus SP} PDB: 2ahg_A* 2fv0_A* 2fv1_A* 2d5j_A 1vd5_A 2fuz_A Back     alignment and structure
>1fp3_A N-acyl-D-glucosamine 2-epimerase; alpha/alpha-barrel, isomer; 2.00A {Sus scrofa} SCOP: a.102.1.3 Back     alignment and structure
>3pmm_A Putative cytoplasmic protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics; 1.90A {Klebsiella pneumoniae subsp} PDB: 3qwt_A Back     alignment and structure
>2zzr_A Unsaturated glucuronyl hydrolase; alpha barrel; 1.75A {Streptococcus agalactiae} PDB: 3anj_A 3ank_A* 3ani_A* Back     alignment and structure
>1nc5_A Hypothetical protein YTER; structural genomics, helix barrel, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.60A {Bacillus subtilis} SCOP: a.102.1.6 PDB: 2d8l_A* 2gh4_A* Back     alignment and structure
>2zbl_A Putative isomerase; N-acyl-D-glucosamine 2-epimerase protein family; HET: BMA; 1.60A {Salmonella typhimurium} PDB: 2afa_A 2rgk_A* Back     alignment and structure
>1fp3_A N-acyl-D-glucosamine 2-epimerase; alpha/alpha-barrel, isomer; 2.00A {Sus scrofa} SCOP: a.102.1.3 Back     alignment and structure
>3h7l_A Endoglucanase; dehydrogenase, PSI-2, NYSGXRC, structural GEN protein structure initiative; 2.30A {Vibrio parahaemolyticus} Back     alignment and structure
>3k11_A Putative glycosyl hydrolase; structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; HET: MSE MES; 1.80A {Bacteroides thetaiotaomicron vpi-5482} Back     alignment and structure
>1nxc_A Mannosyl-oligosaccharide 1,2-alpha-mannosidase IA; glycosidase, structural genomics, PSI, protein initiative; HET: NAG BMA MAN; 1.51A {Mus musculus} SCOP: a.102.2.1 Back     alignment and structure
>1ks8_A Endo-B-1,4-glucanase; cellulase, endoglucanase, termite, glycosyl hydrolase, family 9, (alpha/alpha)6; 1.40A {Nasutitermes takasagoensis} SCOP: a.102.1.2 PDB: 1ksc_A 1ksd_A Back     alignment and structure
>1dl2_A Class I alpha-1,2-mannosidase; alpha-alpha helix barrel, hydrolase; HET: NAG NDG BMA MAN; 1.54A {Saccharomyces cerevisiae} SCOP: a.102.2.1 PDB: 1g6i_A* Back     alignment and structure
>3e6u_A LANC-like protein 1; alpha barrel, cytoplasm, signaling protein; 2.60A {Homo sapiens} PDB: 3e73_A* Back     alignment and structure
>1ia6_A Cellulase CEL9M; cellullase, alpha barrel, hydrolase; 1.80A {Clostridium cellulolyticum} SCOP: a.102.1.2 PDB: 1ia7_A* Back     alignment and structure
>1x9d_A Endoplasmic reticulum mannosyl-oligosaccharide 1, 2-alpha-mannosidase; substrate analogue, glycosyl hydrolase; HET: SMD; 1.41A {Homo sapiens} SCOP: a.102.2.1 PDB: 1fo3_A* 1fo2_A* 1fmi_A Back     alignment and structure
>1tf4_A T. fusca endo/EXO-cellulase E4 catalytic domain and cellulose-binding domain; glycosyl hydrolase, cellulose degradation; 1.90A {Thermobifida fusca} SCOP: a.102.1.2 b.2.2.2 PDB: 1js4_A 3tf4_A* 4tf4_A* Back     alignment and structure
>3e6u_A LANC-like protein 1; alpha barrel, cytoplasm, signaling protein; 2.60A {Homo sapiens} PDB: 3e73_A* Back     alignment and structure
>2xfg_A Endoglucanase 1; hydrolase-sugar binding protein complex, family-9 glycoside hydrolase, hydrolase, sugar binding protein; 1.68A {Clostridium thermocellum} Back     alignment and structure
>1g87_A Endocellulase 9G; endoglucanase, cellulose binding domain, (ALPH 6-helix barrel, beta barrel, hydrolase; 1.60A {Clostridium cellulolyticum} SCOP: a.102.1.2 b.2.2.2 PDB: 1ga2_A* 1k72_A* 1kfg_A* Back     alignment and structure
>1nxc_A Mannosyl-oligosaccharide 1,2-alpha-mannosidase IA; glycosidase, structural genomics, PSI, protein initiative; HET: NAG BMA MAN; 1.51A {Mus musculus} SCOP: a.102.2.1 Back     alignment and structure
>1hcu_A Alpha-1,2-mannosidase; glycosylation, glycosyl hydrolase; HET: NAG; 2.37A {Trichoderma reesei} SCOP: a.102.2.1 Back     alignment and structure
>2ri9_A Mannosyl-oligosaccharide alpha-1,2-mannosidase; alternative conformations, modulation of activity, glycoprot glycosidase, hydrolase; HET: NAG NDG MAN MMA; 1.95A {Penicillium citrinum} SCOP: a.102.2.1 PDB: 2ri8_A* 1kkt_A* 1kre_A* 1krf_A* Back     alignment and structure
>1x9d_A Endoplasmic reticulum mannosyl-oligosaccharide 1, 2-alpha-mannosidase; substrate analogue, glycosyl hydrolase; HET: SMD; 1.41A {Homo sapiens} SCOP: a.102.2.1 PDB: 1fo3_A* 1fo2_A* 1fmi_A Back     alignment and structure
>1dl2_A Class I alpha-1,2-mannosidase; alpha-alpha helix barrel, hydrolase; HET: NAG NDG BMA MAN; 1.54A {Saccharomyces cerevisiae} SCOP: a.102.2.1 PDB: 1g6i_A* Back     alignment and structure
>2ri9_A Mannosyl-oligosaccharide alpha-1,2-mannosidase; alternative conformations, modulation of activity, glycoprot glycosidase, hydrolase; HET: NAG NDG MAN MMA; 1.95A {Penicillium citrinum} SCOP: a.102.2.1 PDB: 2ri8_A* 1kkt_A* 1kre_A* 1krf_A* Back     alignment and structure
>3gzk_A Cellulase; fold from GH9 from CAZY database, glycosidase, hydrolase; 1.80A {Alicyclobacillus acidocaldarius subsp} PDB: 3ez8_A 3h2w_A* 3h3k_A* 3rx5_A* 3rx7_A* 3rx8_A* Back     alignment and structure
>2g0d_A Nisin biosynthesis protein NISC; alpha toroid, alpha barrel, biosynthetic protein; 2.21A {Lactococcus lactis subsp} SCOP: a.102.6.1 PDB: 2g02_A Back     alignment and structure
>1hcu_A Alpha-1,2-mannosidase; glycosylation, glycosyl hydrolase; HET: NAG; 2.37A {Trichoderma reesei} SCOP: a.102.2.1 Back     alignment and structure
>1clc_A Endoglucanase CELD; EC: 3.2.1.4; cellulase, glycosyl hydrolase; 1.90A {Clostridium thermocellum} SCOP: a.102.1.2 b.1.18.2 Back     alignment and structure
>1ut9_A Cellulose 1,4-beta-cellobiosidase; hydrolase, glycoside hydrolase, family 9, cellobiohydrolase; 2.1A {Clostridium thermocellum} SCOP: a.102.1.2 b.1.18.2 PDB: 1rq5_A* Back     alignment and structure
>2yik_A Endoglucanase; hydrolase; 2.10A {Clostridium thermocellum} Back     alignment and structure
>2g0d_A Nisin biosynthesis protein NISC; alpha toroid, alpha barrel, biosynthetic protein; 2.21A {Lactococcus lactis subsp} SCOP: a.102.6.1 PDB: 2g02_A Back     alignment and structure
>2v8i_A Pectate lyase; periplasm, beta-elimination, pectin degradation; 1.50A {Yersinia enterocolitica} PDB: 2v8k_A* 2v8j_A Back     alignment and structure
>3h7l_A Endoglucanase; dehydrogenase, PSI-2, NYSGXRC, structural GEN protein structure initiative; 2.30A {Vibrio parahaemolyticus} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query855
d1wd3a2162 Alpha-L-arabinofuranosidase B (AbfB), C-terminal d 99.5
d1wd3a2162 Alpha-L-arabinofuranosidase B (AbfB), C-terminal d 99.14
d2d5ja1377 Unsaturated glucuronyl hydrolase {Bacillus sp. GL1 98.75
d1nc5a_363 Hypothetical protein YteR {Bacillus subtilis [TaxI 97.98
d1nc5a_363 Hypothetical protein YteR {Bacillus subtilis [TaxI 97.92
d2afaa1411 Putative NAG isomerase YihS {Salmonella typhimuriu 97.78
d2afaa1411 Putative NAG isomerase YihS {Salmonella typhimuriu 97.68
d2d5ja1377 Unsaturated glucuronyl hydrolase {Bacillus sp. GL1 97.26
d1ks8a_433 Endo-b-1,4-glucanase {Termite (Nasutitermes takasa 96.7
d1nxca_467 Class I alpha-1;2-mannosidase, catalytic domain {M 96.63
d1ia6a_431 Nonprocessive cellulase Cel9M {Clostridium cellulo 96.63
d1fp3a_402 N-acyl-D-glucosamine 2-epimerase {Pig (Sus scrofa) 96.38
d1fp3a_402 N-acyl-D-glucosamine 2-epimerase {Pig (Sus scrofa) 96.3
d1x9da1453 Class I alpha-1;2-mannosidase, catalytic domain {H 96.16
d1g87a1454 Endo/exocellulase:cellobiose E-4, N-terminal domai 96.06
d1ut9a1511 Cellulose 1,4-beta-cellobiosidase CbhA {Clostridiu 96.04
d1hcua_488 Class I alpha-1;2-mannosidase, catalytic domain {T 95.67
d1tf4a1460 Endo/exocellulase:cellobiose E-4, N-terminal domai 95.59
d1dl2a_511 Class I alpha-1;2-mannosidase, catalytic domain {B 95.57
d2ri9a1475 Class I alpha-1;2-mannosidase, catalytic domain {F 94.28
d1clca1441 CelD cellulase, C-terminal domain {Clostridium the 94.24
d1nxca_467 Class I alpha-1;2-mannosidase, catalytic domain {M 93.62
d1dl2a_511 Class I alpha-1;2-mannosidase, catalytic domain {B 89.34
d2ri9a1475 Class I alpha-1;2-mannosidase, catalytic domain {F 81.5
d1hcua_488 Class I alpha-1;2-mannosidase, catalytic domain {T 80.94
>d1wd3a2 b.42.8.1 (A:338-499) Alpha-L-arabinofuranosidase B (AbfB), C-terminal domain {Aspergillus kawachii [TaxId: 40384]} Back     information, alignment and structure
class: All beta proteins
fold: beta-Trefoil
superfamily: AbfB domain
family: AbfB domain
domain: Alpha-L-arabinofuranosidase B (AbfB), C-terminal domain
species: Aspergillus kawachii [TaxId: 40384]

Probab=99.50  E-value=1.6e-14  Score=139.72  Aligned_cols=113  Identities=15%  Similarity=0.213  Sum_probs=93.0

Q ss_pred             cCCcc--eecCCCCCCCcceecccCCcceEEec--C----CCCceEEEeecCCCCCCeEEEeecCCCCeEEEeccccCCC
Q 043003          720 VISKQ--VMFEPFDFPGKLLMQQGNNDSLVIAN--N----PGNSVFQVNAGLDGKPDTVSLESVSRKGCFVFSDVNLKAG  791 (855)
Q Consensus       720 ~~g~~--v~lepfd~Pg~~v~~~~~~~~l~v~~--~----~~~s~f~~vpgl~g~~~~vsles~~~pg~~~~~~~~~~~g  791 (855)
                      ..|..  ++++....|+++|||++.--.|.+..  +    ..|++|+|||||.+ +|+|||||+++||.|||+ .    +
T Consensus         8 ~~G~~~slr~~s~~y~~rylrH~~~~~~l~~v~~~s~~~~k~dasf~v~~Gl~~-~~~vSfES~n~Pg~yLRH-~----n   81 (162)
T d1wd3a2           8 TSGEVVSLRVTTPGYTTRYIAHTDTTVNTQVVDDDSSTTLKEEASWTVVTGLAN-SQCFSFESVDTPGSYIRH-Y----N   81 (162)
T ss_dssp             CTTCEEEEEECSTTCTTEEEEEETTEEEEEECCTTSCHHHHHHTCEEEEECSSC-TTSEEEEESSSTTEEEEE-E----T
T ss_pred             ccCceEEEEEeCCCCCceEEEEcCCcEEEEeccCCcchhhcccceEEEccCcCC-CCeEEEEEcCCCCcEEEE-E----C
Confidence            34554  46689999999999965544444422  2    26899999999998 799999999999999998 3    6


Q ss_pred             ceEEEeecCCCcccccccceecccCccccCcceEEEecCCCceecccc
Q 043003          792 TALKLNCQQPDDGFKQAASFVMQKGISQYHPISFLAKGSNRNYLLAPL  839 (855)
Q Consensus       792 ~~~~~~~~~~~~~f~~~asf~~~~gl~~~~~~sf~a~g~~~~~l~~pl  839 (855)
                      ..|+|+..++++.|+++|||..++|| .-..+||+...-+..||.+=-
T Consensus        82 ~~l~L~~~d~s~~F~~DATF~~~~gl-~~~g~SfeS~n~p~~YlRH~n  128 (162)
T d1wd3a2          82 FELLLNANDGTKQFHEDATFCPQAAL-NGEGTSLRSWSYPTRYFRHYE  128 (162)
T ss_dssp             TEEEEEECCCCHHHHHHTCEEEEECT-TSSSEEEEESSSTTCEEEEET
T ss_pred             CEEEEecCCCccccccCceEEEeeCc-CCCceEEEEecCCCceEEeeC
Confidence            68999987788899999999999999 556899999999999986543
>d1wd3a2 b.42.8.1 (A:338-499) Alpha-L-arabinofuranosidase B (AbfB), C-terminal domain {Aspergillus kawachii [TaxId: 40384]} Back     information, alignment and structure
>d2d5ja1 a.102.1.7 (A:1-377) Unsaturated glucuronyl hydrolase {Bacillus sp. GL1 [TaxId: 84635]} Back     information, alignment and structure
>d1nc5a_ a.102.1.6 (A:) Hypothetical protein YteR {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1nc5a_ a.102.1.6 (A:) Hypothetical protein YteR {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d2afaa1 a.102.1.3 (A:4-415) Putative NAG isomerase YihS {Salmonella typhimurium [TaxId: 90371]} Back     information, alignment and structure
>d2afaa1 a.102.1.3 (A:4-415) Putative NAG isomerase YihS {Salmonella typhimurium [TaxId: 90371]} Back     information, alignment and structure
>d2d5ja1 a.102.1.7 (A:1-377) Unsaturated glucuronyl hydrolase {Bacillus sp. GL1 [TaxId: 84635]} Back     information, alignment and structure
>d1ks8a_ a.102.1.2 (A:) Endo-b-1,4-glucanase {Termite (Nasutitermes takasagoensis) [TaxId: 62960]} Back     information, alignment and structure
>d1nxca_ a.102.2.1 (A:) Class I alpha-1;2-mannosidase, catalytic domain {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1ia6a_ a.102.1.2 (A:) Nonprocessive cellulase Cel9M {Clostridium cellulolyticum [TaxId: 1521]} Back     information, alignment and structure
>d1fp3a_ a.102.1.3 (A:) N-acyl-D-glucosamine 2-epimerase {Pig (Sus scrofa) [TaxId: 9823]} Back     information, alignment and structure
>d1fp3a_ a.102.1.3 (A:) N-acyl-D-glucosamine 2-epimerase {Pig (Sus scrofa) [TaxId: 9823]} Back     information, alignment and structure
>d1x9da1 a.102.2.1 (A:245-697) Class I alpha-1;2-mannosidase, catalytic domain {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1g87a1 a.102.1.2 (A:3-456) Endo/exocellulase:cellobiose E-4, N-terminal domain {Clostridium cellulolyticum, atcc 35319 [TaxId: 1521]} Back     information, alignment and structure
>d1ut9a1 a.102.1.2 (A:306-816) Cellulose 1,4-beta-cellobiosidase CbhA {Clostridium thermocellum [TaxId: 1515]} Back     information, alignment and structure
>d1hcua_ a.102.2.1 (A:) Class I alpha-1;2-mannosidase, catalytic domain {Trichoderma reesei [TaxId: 51453]} Back     information, alignment and structure
>d1tf4a1 a.102.1.2 (A:1-460) Endo/exocellulase:cellobiose E-4, N-terminal domain {Thermomonospora fusca [TaxId: 2021]} Back     information, alignment and structure
>d1dl2a_ a.102.2.1 (A:) Class I alpha-1;2-mannosidase, catalytic domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d2ri9a1 a.102.2.1 (A:1036-1510) Class I alpha-1;2-mannosidase, catalytic domain {Fungus (Penicillium citrinum) [TaxId: 5077]} Back     information, alignment and structure
>d1clca1 a.102.1.2 (A:135-575) CelD cellulase, C-terminal domain {Clostridium thermocellum [TaxId: 1515]} Back     information, alignment and structure
>d1nxca_ a.102.2.1 (A:) Class I alpha-1;2-mannosidase, catalytic domain {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1dl2a_ a.102.2.1 (A:) Class I alpha-1;2-mannosidase, catalytic domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d2ri9a1 a.102.2.1 (A:1036-1510) Class I alpha-1;2-mannosidase, catalytic domain {Fungus (Penicillium citrinum) [TaxId: 5077]} Back     information, alignment and structure
>d1hcua_ a.102.2.1 (A:) Class I alpha-1;2-mannosidase, catalytic domain {Trichoderma reesei [TaxId: 51453]} Back     information, alignment and structure