Citrus Sinensis ID: 043019

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200----
Protein Sequence
MSSTTKAADRKAATDVAAWMFNVVTSVGIIMVNKALMATYGFSFATTLTGLHFATTTMLTTFLRWLGYIQTSHLPFSELVRFVVFANFSIVGMNVSLMWNSVGFYQIAKLSMIPVSCFLEVVLDKVRYSRDTKLSILLVLFGVGVCTVTDVSVNAKGFIAAFVAVWSTAMQQYHVILNISVSITHLFLCLNHHIVCIPVVVVVD
Secondary Structure (PSIPRED)
cccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHccHHHHHHHHHHHHcccccHHHHHHHHHHHHHHEEEEEccccccHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHEEcc
Secondary Structure Prediction (SSPRO)
ccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHcHHHccHHHHHHHHHHHHHHHHHHHHHHHcccccHHHEEEEHHHHHHHHEEEHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHcccEEEEEEEEEEc
Coil and Loop (DISEMBL)
mssttkaaDRKAATDVAAWMFNVVTSVGIIMVNKALMATYGFSFATTLTGLHFATTTMLTTFLRWLGyiqtshlpfsELVRFVVFANFSIVGMNVSLMWNSVGFYQIAKLSMIPVSCFLEVVLDkvrysrdtKLSILLVLFGVGVCTVTDVSVNAKGFIAAFVAVWSTAMQQYHVILNISVSITHLFLCLNHHIVCIPVVVVVD
Flexible Loop (DISEMBL)
mssttkaadrkaatdvAAWMFNVVTSVGIIMVNKALMATYGFSFATTLTGLHFATTTMLTTFLRWLGYIQTSHLPFSELVRFVVFANFSIVGMNVSLMWNSVGFYQIAKLSMIPVSCFLEVVLDKVRYSRDTKLSILLVLFGVGVCTVTDVSVNAKGFIAAFVAVWSTAMQQYHVILNISVSITHLFLCLNHHIVCIPVVVVVD
Low Complexity Region (SEG)
MSSttkaadrkaatdvaaWMFNVVTSVGIIMVNKALMATYGFSfattltglhfatttMLTTFLRWLGYIQTSHLPFSELVRFVVFANFSIVGMNVSLMWNSVGFYQIAKLSMIPVSCFLEVVLDKVRYSRDTKLSILLVLFGVGVCTVTDVSVNAKGFIAAFVAVWSTAMQQYHVILNISVSITHLFLCLNHHIVCIPvvvvvD
Disordered region (IsUnstruct)
*************TDVAAWMFNVVTSVGIIMVNKALMATYGFSFATTLTGLHFATTTMLTTFLRWLGYIQTSHLPFSELVRFVVFANFSIVGMNVSLMWNSVGFYQIAKLSMIPVSCFLEVVLDKVRYSRDTKLSILLVLFGVGVCTVTDVSVNAKGFIAAFVAVWSTAMQQYHVILNISVSITHLFLCLNHHIVCIPVVVVV*
Disordered Region (DISOPRED)
***************VAAWMFNVVTSVGIIMVNKALMATYGFSFATTLTGLHFATTTMLTTFLRWLGYIQTSHLPFSELVRFVVFANFSIVGMNVSLMWNSVGFYQIAKLSMIPVSCFLEVVLDKVRYSRDTKLSILLVLFGVGVCTVTDVSVNAKGFIAAFVAVWSTAMQQYHVILNISVSITHLFLCLNHHIVCIPVVVVVD
Disordered Region (DISEMBL)
************ATDVAAWMFNVVTSVGIIMVNKALMATYGFSFATTLTGLHFATTTMLTTFLRWLGYIQTSHLPFSELVRFVVFANFSIVGMNVSLMWNSVGFYQIAKLSMIPVSCFLEVVLDKVRYSRDTKLSILLVLFGVGVCTVTDVSVNAKGFIAAFVAVWSTAMQQYHVILNISVSITHLFLCLNHHIVCIPVVVVVD
Disordered Region (DISPRO)
********DRKAATDVAAWMFNVVTSVGIIMVNKALMATYGFSFATTLTGLHFATTTMLTTFLRWLGYIQTSHLPFSELVRFVVFANFSIVGMNVSLMWNSVGFYQIAKLSMIPVSCFLEVVLDKVRYSRDTKLSILLVLFGVGVCTVTDVSVNAKGFIAAFVAVWSTAMQQYHVILNISVSITHLFLCLNHHIVCIPVVVVVD
Transmembrane Helix (TMHMM)
ooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHi
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHi
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHooo
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHHHHi
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MSSTTKAADRKAATDVAAWMFNVVTSVGIIMVNKALMATYGFSFATTLTGLHFATTTMLTTFLRWLGYIQTSHLPFSELVRFVVFANFSIVGMNVSLMWNSVGFYQIAKLSMIPVSCFLEVVLDKVRYSRDTKLSILLVLFGVGVCTVTDVSVNAKGFIAAFVAVWSTAMQQYHVILNISVSITHLFLCLNHHIVCIPVVVVVD
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	204	2.2.26 [Sep-21-2011]
Q9SRE4	347	UDP-galactose transporter	no	no	0.818	0.481	0.538	2e-40
Q8RXL8	357	Uncharacterized membrane	no	no	0.676	0.386	0.387	3e-19
Q1JQ66	313	Solute carrier family 35	yes	no	0.720	0.469	0.295	6e-08
A4IFK2	313	Solute carrier family 35	yes	no	0.759	0.495	0.278	3e-05
Q6PGC7	313	Solute carrier family 35	yes	no	0.759	0.495	0.278	0.0001
Q7Z769	313	Solute carrier family 35	yes	no	0.715	0.466	0.284	0.0003
Q762D5	326	UDP-N-acetylglucosamine/U	no	no	0.647	0.404	0.269	0.0004

>sp|Q9SRE4|UGAL2_ARATH UDP-galactose transporter 2 OS=Arabidopsis thaliana GN=UDP-GALT2 PE=2 SV=1

 Score =  165 bits (418), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 91/169 (53%), Positives = 118/169 (69%), Gaps = 2/169 (1%)

Query: 6   KAADRKAATDVAAWMFNVVTSVGIIMVNKALMAT--YGFSFATTLTGLHFATTTMLTTFL 63
           ++  + A +DV AW  NV++SVGIIM NK LM++  +GF FATTLTG HFA T ++    
Sbjct: 5   ESEKKSAVSDVGAWAMNVISSVGIIMANKQLMSSSGFGFGFATTLTGFHFAFTALVGMVS 64

Query: 64  RWLGYIQTSHLPFSELVRFVVFANFSIVGMNVSLMWNSVGFYQIAKLSMIPVSCFLEVVL 123
              G   + H+P  EL+ F + AN SI  MN SLM NSVGFYQI+KLSMIPV C LE +L
Sbjct: 65  NATGLSASKHVPLWELLWFSIVANISIAAMNFSLMLNSVGFYQISKLSMIPVVCVLEWIL 124

Query: 124 DKVRYSRDTKLSILLVLFGVGVCTVTDVSVNAKGFIAAFVAVWSTAMQQ 172
               Y ++ K S+++V+ GVG+CTVTDV VNAKGFI A  AV+ST++QQ
Sbjct: 125 HSKHYCKEVKASVMVVVIGVGICTVTDVKVNAKGFICACTAVFSTSLQQ 173

UDP-galactose transporter that transports UDP-galactose, UDP-glucose and GDP-fucose.
Arabidopsis thaliana (taxid: 3702)

>sp|Q8RXL8|Y1689_ARATH Uncharacterized membrane protein At1g06890 OS=Arabidopsis thaliana GN=At1g06890 PE=1 SV=1

 Score = 95.1 bits (235), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 55/142 (38%), Positives = 86/142 (60%), Gaps = 4/142 (2%)

Query: 33  NKALMATYGFSFATTLTGLHFATTTMLTTFLRWLGYIQTSHLPFSE--LVRFVVFANFSI 90
           NKAL++T GF+FATTLT  H   T        W+   +  H PF    ++ F +    SI
Sbjct: 29  NKALISTLGFTFATTLTSWHLLVTFCSLHVALWMKMFE--HKPFDPRAVMGFGILNGISI 86

Query: 91  VGMNVSLMWNSVGFYQIAKLSMIPVSCFLEVVLDKVRYSRDTKLSILLVLFGVGVCTVTD 150
             +N+SL +NSVGFYQ+ KL++IP +  LE +  + ++SR  + S+ ++L GVG+ TVTD
Sbjct: 87  GLLNLSLGFNSVGFYQMTKLAIIPCTVLLETLFFRKKFSRKIQFSLTILLLGVGIATVTD 146

Query: 151 VSVNAKGFIAAFVAVWSTAMQQ 172
           + +N  G + + +AV +T + Q
Sbjct: 147 LQLNMLGSVLSLLAVVTTCVAQ 168

Arabidopsis thaliana (taxid: 3702)

>sp|Q1JQ66|S35E3_DANRE Solute carrier family 35 member E3 OS=Danio rerio GN=slc35e3 PE=2 SV=1

 Score = 57.4 bits (137), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 49/166 (29%), Positives = 82/166 (49%), Gaps = 19/166 (11%)

Query: 16  VAAWMFNVVTSVGIIMVNKALMATYGFSFATTLTGLHFATTTMLTTFLRWLG-------- 67
           +A  + N+++S+ I+ +NK +   YGF    TLT +HF  T        WLG        
Sbjct: 15  IAGLLVNLLSSICIVFINKWIYVHYGFP-NMTLTLIHFVMT--------WLGLFICQKMD 65

Query: 68  -YIQTSHLPFSELVRFVVFANFSIVGMNVSLMWNSVGFYQIAKLSMIPVSCFLEVVLDKV 126
            +   S  P   L+  + F  F +V  N+SL  N++G YQ+AK+   PV   ++ +  + 
Sbjct: 66  IFAPKSLRPSKILLLALSFCGF-VVFTNLSLQSNTIGTYQLAKVMTTPVIIAIQTMYYRK 124

Query: 127 RYSRDTKLSILLVLFGVGVCTVTDVSVNAKGFIAAFVAVWSTAMQQ 172
            +S   KL+++ +  GV + +  DV  N  G I A + V  T++ Q
Sbjct: 125 TFSTKIKLTLVPITLGVILNSYYDVRFNLMGMIFATLGVLVTSLYQ 170

Putative transporter.

Danio rerio (taxid: 7955)

>sp|A4IFK2|S35E3_BOVIN Solute carrier family 35 member E3 OS=Bos taurus GN=SLC35E3 PE=2 SV=1

 Score = 48.5 bits (114), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 49/176 (27%), Positives = 80/176 (45%), Gaps = 21/176 (11%)

Query: 8   ADRKAATD--VAAWMFNVVTSVGIIMVNKALMATYGFSFATTLTGLHFATTTMLTTFLRW 65
           ADR        A  + N++ S+ I+ +NK +   YGF    +LT +HF  T        W
Sbjct: 5   ADRVRGNGRIAAGLLLNLLVSICIVFLNKWIYVHYGFP-NMSLTLVHFVVT--------W 55

Query: 66  LGYIQTSHLPF---------SELVRFVVFANFSIVGMNVSLMWNSVGFYQIAKLSMIPVS 116
           LG      L             L+  + F  F +V  N+SL  N++G YQ+AK    PV 
Sbjct: 56  LGLYVCQKLDIFAPKSLPPSKLLLLALSFCGF-VVFTNLSLQNNTIGTYQLAKAMTTPVI 114

Query: 117 CFLEVVLDKVRYSRDTKLSILLVLFGVGVCTVTDVSVNAKGFIAAFVAVWSTAMQQ 172
             ++ +  K  +S   +L+++ +  GV + +  DV  N  G + A + V  T++ Q
Sbjct: 115 IVIQTLCYKKTFSTKIRLTLIPITLGVILNSYYDVKFNFLGTVFAALGVLVTSLYQ 170

Putative transporter.

Bos taurus (taxid: 9913)

>sp|Q6PGC7|S35E3_MOUSE Solute carrier family 35 member E3 OS=Mus musculus GN=Slc35e3 PE=2 SV=1

 Score = 46.2 bits (108), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 49/176 (27%), Positives = 83/176 (47%), Gaps = 21/176 (11%)

Query: 8   ADRKAATD--VAAWMFNVVTSVGIIMVNKALMATYGFSFATTLTGLHFATTTMLTTFLRW 65
           ADR        A  +FN++ S+ I+ +NK +   +GF    +LT +HF  T        W
Sbjct: 5   ADRVRGNGRIAAGLLFNLLVSICIVFLNKWIYVHHGFP-NMSLTLVHFVVT--------W 55

Query: 66  LG-YIQTSHLPFSELVRFVV--------FANFSIVGMNVSLMWNSVGFYQIAKLSMIPVS 116
           LG YI      F+     +         F  F +V  N+SL  N++G YQ+AK    PV 
Sbjct: 56  LGLYICQKLNIFAPKSLPLSKLLLLALSFCGF-VVFTNLSLQNNTIGTYQLAKAMTTPVI 114

Query: 117 CFLEVVLDKVRYSRDTKLSILLVLFGVGVCTVTDVSVNAKGFIAAFVAVWSTAMQQ 172
             ++    + R+S   +L+++ +  GV + +  DV  ++ G + A + V  T++ Q
Sbjct: 115 IAIQTFWYQKRFSVRIQLTLIPITVGVILNSYYDVKFHSLGMVFAALGVVVTSLYQ 170

Putative transporter.

Mus musculus (taxid: 10090)

>sp|Q7Z769|S35E3_HUMAN Solute carrier family 35 member E3 OS=Homo sapiens GN=SLC35E3 PE=2 SV=1

 Score = 45.4 bits (106), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 47/165 (28%), Positives = 80/165 (48%), Gaps = 19/165 (11%)

Query: 17  AAWMFNVVTSVGIIMVNKALMATYGFSFATTLTGLHFATTTMLTTFLRWLG-YIQTSHLP 75
           A  +FN++ S+ I+ +NK +   +GF    +LT +HF  T        WLG YI      
Sbjct: 16  AGLLFNLLVSICIVFLNKWIYVYHGFP-NMSLTLVHFVVT--------WLGLYICQKLDI 66

Query: 76  FSE--------LVRFVVFANFSIVGMNVSLMWNSVGFYQIAKLSMIPVSCFLEVVLDKVR 127
           F+         L+  + F  F +V  N+SL  N++G YQ+AK    PV   ++    +  
Sbjct: 67  FAPKSLPPSRLLLLALSFCGF-VVFTNLSLQNNTIGTYQLAKAMTTPVIIAIQTFCYQKT 125

Query: 128 YSRDTKLSILLVLFGVGVCTVTDVSVNAKGFIAAFVAVWSTAMQQ 172
           +S   +L+++ +  GV + +  DV  N  G + A + V  T++ Q
Sbjct: 126 FSTRIQLTLIPITLGVILNSYYDVKFNFLGMVFAALGVLVTSLYQ 170

Putative transporter.

Homo sapiens (taxid: 9606)

>sp|Q762D5|S35D2_MOUSE UDP-N-acetylglucosamine/UDP-glucose/GDP-mannose transporter OS=Mus musculus GN=Slc35d2 PE=2 SV=1

 Score = 44.7 bits (104), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 38/141 (26%), Positives = 70/141 (49%), Gaps = 9/141 (6%)

Query: 29  IIMVNKALMATYGFSFATTLTGLHFATTTMLTTFLRWLGYIQTSHLP-FSELVRFVVFA- 86
           I++VNKAL+ TYGF     L     ATT M+    +    I   H P F + +   +F  
Sbjct: 29  IVLVNKALLTTYGFPSPIVLGIGQMATTIMILYVFKLNKII---HFPDFDKKIPGKLFPL 85

Query: 87  NFSIVGMNVSLMWN----SVGFYQIAKLSMIPVSCFLEVVLDKVRYSRDTKLSILLVLFG 142
               VG ++S + +    S+  + + +   IP +  LE ++   +YS +  LS+L ++ G
Sbjct: 86  PLLYVGNHISGLSSTSKLSLPMFTVLRKFTIPFTLLLEAIILGTQYSLNIILSVLAIVLG 145

Query: 143 VGVCTVTDVSVNAKGFIAAFV 163
             +   +D++ N +G++  F+
Sbjct: 146 AFIAAGSDLTFNLEGYVFVFL 166

Antiporter transporting nucleotide sugars such as UDP-N-acetylglucosamine (UDP-GlcNAc), UDP-glucose (UDP-Glc) and GDP-mannose (GDP-Man) pooled in the cytosol into the lumen of the Golgi in exchange for the corresponding nucleosides monophosphates (UMP for UDP-sugars and GMP for GDP-sugars). May take part in heparan sulfate synthesis by supplying UDP-Glc-NAc, the donor substrate, and thus be involved in growth factor signaling.

Mus musculus (taxid: 10090)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	204
296082532	335	unnamed protein product [Vitis vinifera]	0.848	0.516	0.867	3e-81
356525555	351	PREDICTED: UDP-galactose transporter 2-l	0.852	0.495	0.851	4e-81
225438501	337	PREDICTED: UDP-galactose transporter 2-l	0.848	0.513	0.867	4e-81
363806840	337	uncharacterized protein LOC100814890 [Gl	0.852	0.516	0.845	1e-80
255586491	335	organic anion transporter, putative [Ric	0.852	0.519	0.857	6e-80
224062856	336	predicted protein [Populus trichocarpa]	0.857	0.520	0.788	1e-78
224085186	335	predicted protein [Populus trichocarpa]	0.852	0.519	0.811	2e-78
357519695	342	Membrane protein, putative [Medicago tru	0.852	0.508	0.822	2e-78
224096440	334	predicted protein [Populus trichocarpa]	0.848	0.517	0.834	2e-78
15234794	335	Nucleotide-sugar transporter family prot	0.833	0.507	0.841	3e-78

>gi|296082532|emb|CBI21537.3| unnamed protein product [Vitis vinifera]

 Score =  306 bits (784), Expect = 3e-81,   Method: Compositional matrix adjust.
 Identities = 150/173 (86%), Positives = 158/173 (91%)

Query: 3   STTKAADRKAATDVAAWMFNVVTSVGIIMVNKALMATYGFSFATTLTGLHFATTTMLTTF 62
           S    AD+KA  D AAWMFNVVTSVGIIMVNKALMATYGFSFATTLTGLHFATTT++TT 
Sbjct: 2   SPANKADKKATVDAAAWMFNVVTSVGIIMVNKALMATYGFSFATTLTGLHFATTTLMTTV 61

Query: 63  LRWLGYIQTSHLPFSELVRFVVFANFSIVGMNVSLMWNSVGFYQIAKLSMIPVSCFLEVV 122
           LRWLGYIQ SHLP SEL+RFV+FAN SIVGMNVSLMWNSVGFYQIAKLSMIPVSC LEVV
Sbjct: 62  LRWLGYIQGSHLPVSELLRFVLFANLSIVGMNVSLMWNSVGFYQIAKLSMIPVSCVLEVV 121

Query: 123 LDKVRYSRDTKLSILLVLFGVGVCTVTDVSVNAKGFIAAFVAVWSTAMQQYHV 175
           LDK+RYSRDTKLSI LVL GV VCTVTDVSVNAKGFIAAFVAVWSTA+QQY+V
Sbjct: 122 LDKMRYSRDTKLSISLVLLGVAVCTVTDVSVNAKGFIAAFVAVWSTALQQYYV 174

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356525555|ref|XP_003531390.1| PREDICTED: UDP-galactose transporter 2-like [Glycine max]

 Score =  306 bits (783), Expect = 4e-81,   Method: Compositional matrix adjust.
 Identities = 149/175 (85%), Positives = 162/175 (92%), Gaps = 1/175 (0%)

Query: 1   MSSTTKAADRKAATDVAAWMFNVVTSVGIIMVNKALMATYGFSFATTLTGLHFATTTMLT 60
           MSS TK  DRK A DVA+WMFN+VTSVGII+VNKALMATYGFSFATTLTGLHFATTT+LT
Sbjct: 16  MSSATKG-DRKTALDVASWMFNIVTSVGIILVNKALMATYGFSFATTLTGLHFATTTLLT 74

Query: 61  TFLRWLGYIQTSHLPFSELVRFVVFANFSIVGMNVSLMWNSVGFYQIAKLSMIPVSCFLE 120
            FL+WLGYIQTSHLP  +L++FV+FANFSIVGMNVSLMWNSVGFYQIAKLSMIPVSCFLE
Sbjct: 75  VFLKWLGYIQTSHLPLPDLIKFVLFANFSIVGMNVSLMWNSVGFYQIAKLSMIPVSCFLE 134

Query: 121 VVLDKVRYSRDTKLSILLVLFGVGVCTVTDVSVNAKGFIAAFVAVWSTAMQQYHV 175
           V+LD VRYSRDTKLSI LVL GV VCTVTDVSVNAKGFIAA VAVWST++QQY+V
Sbjct: 135 VILDNVRYSRDTKLSISLVLLGVAVCTVTDVSVNAKGFIAAAVAVWSTSLQQYYV 189

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225438501|ref|XP_002278813.1| PREDICTED: UDP-galactose transporter 2-like [Vitis vinifera]

 Score =  306 bits (783), Expect = 4e-81,   Method: Compositional matrix adjust.
 Identities = 150/173 (86%), Positives = 158/173 (91%)

Query: 3   STTKAADRKAATDVAAWMFNVVTSVGIIMVNKALMATYGFSFATTLTGLHFATTTMLTTF 62
           S    AD+KA  D AAWMFNVVTSVGIIMVNKALMATYGFSFATTLTGLHFATTT++TT 
Sbjct: 4   SPANKADKKATVDAAAWMFNVVTSVGIIMVNKALMATYGFSFATTLTGLHFATTTLMTTV 63

Query: 63  LRWLGYIQTSHLPFSELVRFVVFANFSIVGMNVSLMWNSVGFYQIAKLSMIPVSCFLEVV 122
           LRWLGYIQ SHLP SEL+RFV+FAN SIVGMNVSLMWNSVGFYQIAKLSMIPVSC LEVV
Sbjct: 64  LRWLGYIQGSHLPVSELLRFVLFANLSIVGMNVSLMWNSVGFYQIAKLSMIPVSCVLEVV 123

Query: 123 LDKVRYSRDTKLSILLVLFGVGVCTVTDVSVNAKGFIAAFVAVWSTAMQQYHV 175
           LDK+RYSRDTKLSI LVL GV VCTVTDVSVNAKGFIAAFVAVWSTA+QQY+V
Sbjct: 124 LDKMRYSRDTKLSISLVLLGVAVCTVTDVSVNAKGFIAAFVAVWSTALQQYYV 176

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|363806840|ref|NP_001242035.1| uncharacterized protein LOC100814890 [Glycine max] gi|255640997|gb|ACU20778.1| unknown [Glycine max]

 Score =  305 bits (780), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 148/175 (84%), Positives = 162/175 (92%), Gaps = 1/175 (0%)

Query: 1   MSSTTKAADRKAATDVAAWMFNVVTSVGIIMVNKALMATYGFSFATTLTGLHFATTTMLT 60
           MSS TK  DRK A DVA+WMFN+VTSVGII+VNKALMATYGFSFATTLTGLHFATTT+LT
Sbjct: 1   MSSATKG-DRKTALDVASWMFNIVTSVGIILVNKALMATYGFSFATTLTGLHFATTTLLT 59

Query: 61  TFLRWLGYIQTSHLPFSELVRFVVFANFSIVGMNVSLMWNSVGFYQIAKLSMIPVSCFLE 120
            FL+WLGY+QTSHLP  +L++FV+FANFSIVGMNVSLMWNSVGFYQIAKLSMIPVSCFLE
Sbjct: 60  VFLKWLGYVQTSHLPLPDLIKFVLFANFSIVGMNVSLMWNSVGFYQIAKLSMIPVSCFLE 119

Query: 121 VVLDKVRYSRDTKLSILLVLFGVGVCTVTDVSVNAKGFIAAFVAVWSTAMQQYHV 175
           V+LD VRYSRDTKLSI LVL GV VCTVTDVSVNAKGFIAA VAVWST++QQY+V
Sbjct: 120 VILDNVRYSRDTKLSISLVLLGVAVCTVTDVSVNAKGFIAAAVAVWSTSLQQYYV 174

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255586491|ref|XP_002533887.1| organic anion transporter, putative [Ricinus communis] gi|223526164|gb|EEF28498.1| organic anion transporter, putative [Ricinus communis]

 Score =  302 bits (773), Expect = 6e-80,   Method: Compositional matrix adjust.
 Identities = 150/175 (85%), Positives = 161/175 (92%), Gaps = 1/175 (0%)

Query: 1   MSSTTKAADRKAATDVAAWMFNVVTSVGIIMVNKALMATYGFSFATTLTGLHFATTTMLT 60
           MSS +KA DRKAA D A+WMFNVVTSVGII+VNKALMATYGFSFATTLTGLHFATTT+LT
Sbjct: 1   MSSPSKA-DRKAALDAASWMFNVVTSVGIILVNKALMATYGFSFATTLTGLHFATTTLLT 59

Query: 61  TFLRWLGYIQTSHLPFSELVRFVVFANFSIVGMNVSLMWNSVGFYQIAKLSMIPVSCFLE 120
             LRWLGYIQ SHLP SEL++FV+FANFSIVGMNVSLMWNSVGFYQIAKLSMIPVSCFLE
Sbjct: 60  FVLRWLGYIQASHLPVSELLKFVLFANFSIVGMNVSLMWNSVGFYQIAKLSMIPVSCFLE 119

Query: 121 VVLDKVRYSRDTKLSILLVLFGVGVCTVTDVSVNAKGFIAAFVAVWSTAMQQYHV 175
           VVLD VRYSRDTKLSI +VL GV VCTVTDVSVN KGFIAA VAVWST++QQY+V
Sbjct: 120 VVLDNVRYSRDTKLSITIVLLGVAVCTVTDVSVNTKGFIAAVVAVWSTSLQQYYV 174

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224062856|ref|XP_002300904.1| predicted protein [Populus trichocarpa] gi|222842630|gb|EEE80177.1| predicted protein [Populus trichocarpa]

 Score =  297 bits (761), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 138/175 (78%), Positives = 161/175 (92%)

Query: 1   MSSTTKAADRKAATDVAAWMFNVVTSVGIIMVNKALMATYGFSFATTLTGLHFATTTMLT 60
           M+ ++  A++K A D AAWMFNVVTSVGII+VNKALMATYGFS+ATTLTG+HFATTT++T
Sbjct: 1   MAPSSSKANKKGAADAAAWMFNVVTSVGIIIVNKALMATYGFSYATTLTGMHFATTTLMT 60

Query: 61  TFLRWLGYIQTSHLPFSELVRFVVFANFSIVGMNVSLMWNSVGFYQIAKLSMIPVSCFLE 120
             LRWLGYIQ SHLP+ EL++FV+FANFSIVGMNVSLMWNSVGFYQIAKL+MIPVSC LE
Sbjct: 61  GVLRWLGYIQASHLPYPELLKFVLFANFSIVGMNVSLMWNSVGFYQIAKLTMIPVSCLLE 120

Query: 121 VVLDKVRYSRDTKLSILLVLFGVGVCTVTDVSVNAKGFIAAFVAVWSTAMQQYHV 175
           V+ DK+RYSRDTKLSI +VL GVGVCT+TDVSVNAKGFIAAF+AVWST++QQY+V
Sbjct: 121 VLFDKIRYSRDTKLSIGVVLLGVGVCTITDVSVNAKGFIAAFIAVWSTSLQQYYV 175

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224085186|ref|XP_002307514.1| predicted protein [Populus trichocarpa] gi|222856963|gb|EEE94510.1| predicted protein [Populus trichocarpa]

 Score =  297 bits (760), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 142/175 (81%), Positives = 160/175 (91%), Gaps = 1/175 (0%)

Query: 1   MSSTTKAADRKAATDVAAWMFNVVTSVGIIMVNKALMATYGFSFATTLTGLHFATTTMLT 60
           M+ ++KA D+K A D  AWMFNVVTSVGII+VNKALMATYGFS+ATTLTG+HFATTT++T
Sbjct: 1   MAPSSKA-DKKGAADAGAWMFNVVTSVGIIIVNKALMATYGFSYATTLTGMHFATTTLMT 59

Query: 61  TFLRWLGYIQTSHLPFSELVRFVVFANFSIVGMNVSLMWNSVGFYQIAKLSMIPVSCFLE 120
             LRWLGYIQ SHLPF EL++FVVFANFSIVGMNVSLMWNSVGFYQIAKLS+IPVSC LE
Sbjct: 60  VVLRWLGYIQASHLPFPELLKFVVFANFSIVGMNVSLMWNSVGFYQIAKLSIIPVSCLLE 119

Query: 121 VVLDKVRYSRDTKLSILLVLFGVGVCTVTDVSVNAKGFIAAFVAVWSTAMQQYHV 175
           V  DK+RYSRDTKLSI +VL GVGVCTVTDVSVNAKGFIAAF+AVWST++QQY+V
Sbjct: 120 VFFDKIRYSRDTKLSIGVVLLGVGVCTVTDVSVNAKGFIAAFIAVWSTSLQQYYV 174

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357519695|ref|XP_003630136.1| Membrane protein, putative [Medicago truncatula] gi|355524158|gb|AET04612.1| Membrane protein, putative [Medicago truncatula]

 Score =  297 bits (760), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 144/175 (82%), Positives = 161/175 (92%), Gaps = 1/175 (0%)

Query: 1   MSSTTKAADRKAATDVAAWMFNVVTSVGIIMVNKALMATYGFSFATTLTGLHFATTTMLT 60
           M STTK  DRK A D+A+W+FNVVTSVGII+VNKALMATYGF+FATTLTGLHFATTT+LT
Sbjct: 1   MDSTTKG-DRKIALDLASWLFNVVTSVGIILVNKALMATYGFTFATTLTGLHFATTTLLT 59

Query: 61  TFLRWLGYIQTSHLPFSELVRFVVFANFSIVGMNVSLMWNSVGFYQIAKLSMIPVSCFLE 120
           +FL+W GYIQ +HLP  +L++FV+FANFSIVGMNVSLMWNSVGFYQIAKLSMIPVSCFLE
Sbjct: 60  SFLKWNGYIQDTHLPLPDLIKFVLFANFSIVGMNVSLMWNSVGFYQIAKLSMIPVSCFLE 119

Query: 121 VVLDKVRYSRDTKLSILLVLFGVGVCTVTDVSVNAKGFIAAFVAVWSTAMQQYHV 175
           +VLD V+YSRDTKLSI LVL GV VCTVTDVSVNAKGFIAA VAVWSTA+QQY+V
Sbjct: 120 IVLDNVKYSRDTKLSISLVLLGVAVCTVTDVSVNAKGFIAAAVAVWSTALQQYYV 174

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224096440|ref|XP_002310620.1| predicted protein [Populus trichocarpa] gi|118483308|gb|ABK93556.1| unknown [Populus trichocarpa] gi|222853523|gb|EEE91070.1| predicted protein [Populus trichocarpa]

 Score =  296 bits (759), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 146/175 (83%), Positives = 160/175 (91%), Gaps = 2/175 (1%)

Query: 1   MSSTTKAADRKAATDVAAWMFNVVTSVGIIMVNKALMATYGFSFATTLTGLHFATTTMLT 60
           MSST   ADRKAA D A+W+FNVVTSVGII+VNKALMATYG+SFATTLTGLHFATTT+LT
Sbjct: 1   MSSTK--ADRKAAGDAASWLFNVVTSVGIILVNKALMATYGYSFATTLTGLHFATTTLLT 58

Query: 61  TFLRWLGYIQTSHLPFSELVRFVVFANFSIVGMNVSLMWNSVGFYQIAKLSMIPVSCFLE 120
             LRWLGYIQ SHLP  +L++FV+FAN SIVGMNVSLMWNSVGFYQIAKLSMIPVSCFLE
Sbjct: 59  VVLRWLGYIQPSHLPLPDLLKFVLFANCSIVGMNVSLMWNSVGFYQIAKLSMIPVSCFLE 118

Query: 121 VVLDKVRYSRDTKLSILLVLFGVGVCTVTDVSVNAKGFIAAFVAVWSTAMQQYHV 175
           VVLD VRYSRDTKLSIL+VL GV VCTVTDVSVNAKGF+AA +AVWSTA+QQY+V
Sbjct: 119 VVLDSVRYSRDTKLSILVVLLGVAVCTVTDVSVNAKGFVAAVIAVWSTALQQYYV 173

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15234794|ref|NP_192719.1| Nucleotide-sugar transporter family protein [Arabidopsis thaliana] gi|4538911|emb|CAB39648.1| hypothetical protein [Arabidopsis thaliana] gi|7267676|emb|CAB78104.1| hypothetical protein [Arabidopsis thaliana] gi|38603966|gb|AAR24728.1| At4g09810 [Arabidopsis thaliana] gi|332657401|gb|AEE82801.1| Nucleotide-sugar transporter family protein [Arabidopsis thaliana]

 Score =  296 bits (759), Expect = 3e-78,   Method: Compositional matrix adjust.
 Identities = 143/170 (84%), Positives = 157/170 (92%)

Query: 6   KAADRKAATDVAAWMFNVVTSVGIIMVNKALMATYGFSFATTLTGLHFATTTMLTTFLRW 65
           K +D+KA  D AAWMFNVVTSVGII+VNKALMATYGFSFATTLTGLHFATTT++T  LR 
Sbjct: 5   KKSDKKATLDAAAWMFNVVTSVGIIIVNKALMATYGFSFATTLTGLHFATTTLMTLVLRC 64

Query: 66  LGYIQTSHLPFSELVRFVVFANFSIVGMNVSLMWNSVGFYQIAKLSMIPVSCFLEVVLDK 125
           LGYIQ SHLPF+EL++F++FANFSIVGMNVSLMWNSVGFYQIAKLSMIPVSC LEVV DK
Sbjct: 65  LGYIQPSHLPFTELLKFILFANFSIVGMNVSLMWNSVGFYQIAKLSMIPVSCLLEVVFDK 124

Query: 126 VRYSRDTKLSILLVLFGVGVCTVTDVSVNAKGFIAAFVAVWSTAMQQYHV 175
           +RYSRDTKLSI LVL GVGVCTVTDVSVN KGF+AAFVAVWSTA+QQY+V
Sbjct: 125 IRYSRDTKLSIGLVLVGVGVCTVTDVSVNTKGFVAAFVAVWSTALQQYYV 174

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	204
TAIR|locus:2118514	335	AT4G09810 [Arabidopsis thalian	0.848	0.516	0.725	1.3e-61
TAIR|locus:2009076	335	AT1G34020 [Arabidopsis thalian	0.769	0.468	0.770	3.4e-61
TAIR|locus:2122467	337	NST-K1 "nucleotide sugar trans	0.857	0.519	0.691	3.9e-60
TAIR|locus:2162271	350	AT5G42420 [Arabidopsis thalian	0.754	0.44	0.5	9.2e-36
TAIR|locus:2199557	348	AT1G21070 [Arabidopsis thalian	0.769	0.451	0.496	8.3e-35
TAIR|locus:2030076	347	AT1G76670 [Arabidopsis thalian	0.769	0.452	0.477	2.8e-34
TAIR|locus:2064316	353	AT2G30460 "AT2G30460" [Arabido	0.730	0.422	0.346	5.7e-20
TAIR|locus:2033097	357	AT1G06890 [Arabidopsis thalian	0.730	0.417	0.339	2.4e-19
TAIR|locus:504955965	342	AT2G28315 [Arabidopsis thalian	0.740	0.441	0.304	5.3e-17
TAIR|locus:2178373	398	AT5G55950 [Arabidopsis thalian	0.745	0.381	0.320	8.1e-14

TAIR|locus:2118514 AT4G09810 [Arabidopsis thaliana (taxid:3702)]

 Score = 630 (226.8 bits), Expect = 1.3e-61, P = 1.3e-61
 Identities = 127/175 (72%), Positives = 141/175 (80%)

Query:    19 WMFNVVTSVGIIMVNKALMATYGFSXXXXXXXXXXXXXXMLTTFLRWLGYIQTSHLPFSE 78
             WMFNVVTSVGII+VNKALMATYGFS              ++T  LR LGYIQ SHLPF+E
Sbjct:    18 WMFNVVTSVGIIIVNKALMATYGFSFATTLTGLHFATTTLMTLVLRCLGYIQPSHLPFTE 77

Query:    79 LVRFVVFANFSIVGMNVSLMWNSVGFYQIAKLSMIPVSCFLEVVLDKVRYSRDTKLSILL 138
             L++F++FANFSIVGMNVSLMWNSVGFYQIAKLSMIPVSC LEVV DK+RYSRDTKLSI L
Sbjct:    78 LLKFILFANFSIVGMNVSLMWNSVGFYQIAKLSMIPVSCLLEVVFDKIRYSRDTKLSIGL 137

Query:   139 VLFGVGVCTVTDVSVNAKGFIAAFVAVWSTAMQQYHV-ILNISVSITHLFLCLNH 192
             VL GVGVCTVTDVSVN KGF+AAFVAVWSTA+QQY+V  L    S++  F  L H
Sbjct:   138 VLVGVGVCTVTDVSVNTKGFVAAFVAVWSTALQQYYVHYLQRKYSLSS-FNLLGH 191

GO:0005886 "plasma membrane" evidence=ISM

GO:0016020 "membrane" evidence=ISS

GO:0006863 "purine nucleobase transport" evidence=RCA

TAIR|locus:2009076 AT1G34020 [Arabidopsis thaliana (taxid:3702)]

 Score = 626 (225.4 bits), Expect = 3.4e-61, P = 3.4e-61
 Identities = 121/157 (77%), Positives = 134/157 (85%)

Query:    19 WMFNVVTSVGIIMVNKALMATYGFSXXXXXXXXXXXXXXMLTTFLRWLGYIQTSHLPFSE 78
             WMFNVVTSVGII+VNKALMATYG+S              ++T  LR LGYIQ SHLPF+E
Sbjct:    18 WMFNVVTSVGIIIVNKALMATYGYSFATTLTGLHFATTTLMTLVLRCLGYIQPSHLPFTE 77

Query:    79 LVRFVVFANFSIVGMNVSLMWNSVGFYQIAKLSMIPVSCFLEVVLDKVRYSRDTKLSILL 138
             L+RF++FANFSIVGMNVSLMWNSVGFYQIAKLSMIPVSC LE+V DK+RYSRDTKLSI L
Sbjct:    78 LLRFILFANFSIVGMNVSLMWNSVGFYQIAKLSMIPVSCLLEMVFDKIRYSRDTKLSIGL 137

Query:   139 VLFGVGVCTVTDVSVNAKGFIAAFVAVWSTAMQQYHV 175
             VL GVGVCTVTDVSVN KGF+AAFVAVWSTA+QQY+V
Sbjct:   138 VLVGVGVCTVTDVSVNTKGFVAAFVAVWSTALQQYYV 174

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0016020 "membrane" evidence=ISS

GO:0006863 "purine nucleobase transport" evidence=RCA

TAIR|locus:2122467 NST-K1 "nucleotide sugar transporter-KT 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 616 (221.9 bits), Expect = 3.9e-60, P = 3.9e-60
 Identities = 121/175 (69%), Positives = 135/175 (77%)

Query:     1 MSSXXXXXXXXXXXXXXXWMFNVVTSVGIIMVNKALMATYGFSXXXXXXXXXXXXXXMLT 60
             MS+               W+FNVVTSVGII+VNKALMATYGFS              +LT
Sbjct:     5 MSATTSKTDQKAALDIASWLFNVVTSVGIILVNKALMATYGFSFATTLTGLHFGTTTLLT 64

Query:    61 TFLRWLGYIQTSHLPFSELVRFVVFANFSIVGMNVSLMWNSVGFYQIAKLSMIPVSCFLE 120
             TFL WLGYIQ S LP+ +L++FV+FANFSIVGMNVSLMWNSVGFYQIAKLSMIPVSC LE
Sbjct:    65 TFLTWLGYIQPSQLPWPDLLKFVLFANFSIVGMNVSLMWNSVGFYQIAKLSMIPVSCLLE 124

Query:   121 VVLDKVRYSRDTKLSILLVLFGVGVCTVTDVSVNAKGFIAAFVAVWSTAMQQYHV 175
             V+LD VRYSRDTKLSILLVL GV VCTVTDVSVN  GF+AA +AVWSTA+QQY+V
Sbjct:   125 VMLDNVRYSRDTKLSILLVLAGVAVCTVTDVSVNLNGFLAAAIAVWSTALQQYYV 179

GO:0005886 "plasma membrane" evidence=ISM

GO:0000139 "Golgi membrane" evidence=IDA

GO:0005338 "nucleotide-sugar transmembrane transporter activity" evidence=IDA

GO:0015780 "nucleotide-sugar transport" evidence=IDA

GO:0055085 "transmembrane transport" evidence=IDA

GO:0006863 "purine nucleobase transport" evidence=RCA

TAIR|locus:2162271 AT5G42420 [Arabidopsis thaliana (taxid:3702)]

 Score = 386 (140.9 bits), Expect = 9.2e-36, P = 9.2e-36
 Identities = 78/156 (50%), Positives = 104/156 (66%)

Query:    19 WMFNVVTSVGIIMVNKALMATYGF--SXXXXXXXXXXXXXXMLTTFLRWLGYIQTSHLPF 76
             W  NV++SVGIIM NK LM++ GF  S              ++       G+  + H+P 
Sbjct:    19 WAMNVISSVGIIMANKQLMSSSGFAFSFATTLTGFHFALTALVGMVSNATGFSASKHVPM 78

Query:    77 SELVRFVVFANFSIVGMNVSLMWNSVGFYQIAKLSMIPVSCFLEVVLDKVRYSRDTKLSI 136
              EL+ F + AN SI  MN SLM NSVGFYQI+KLSMIPV C +E +L   RYSR+ K+S+
Sbjct:    79 WELIWFSIVANVSIAAMNFSLMLNSVGFYQISKLSMIPVVCVMEWILHSKRYSREVKISV 138

Query:   137 LLVLFGVGVCTVTDVSVNAKGFIAAFVAVWSTAMQQ 172
             ++V+ GVG+CTVTDV VNAKGFI A VA++S+++QQ
Sbjct:   139 VVVVVGVGICTVTDVKVNAKGFICACVAIFSSSLQQ 174

GO:0005886 "plasma membrane" evidence=ISM

GO:0009507 "chloroplast" evidence=ISM

GO:0016020 "membrane" evidence=ISS

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0006863 "purine nucleobase transport" evidence=RCA

TAIR|locus:2199557 AT1G21070 [Arabidopsis thaliana (taxid:3702)]

 Score = 377 (137.8 bits), Expect = 8.3e-35, P = 8.3e-35
 Identities = 79/159 (49%), Positives = 101/159 (63%)

Query:    19 WMFNVVTSVGIIMVNKALMAT--YGFSXXXXXXXXXXXXXXMLTTFLRWLGYIQTSHLPF 76
             W  NV +SVGIIM NK LM++  +GFS              ++       G   + H+P 
Sbjct:    19 WAMNVTSSVGIIMANKQLMSSSGFGFSFATTLTGFHFALTALVGMVSNATGLSASKHVPL 78

Query:    77 SELVRFVVFANFSIVGMNVSLMWNSVGFYQIAKLSMIPVSCFLEVVLDKVRYSRDTKLSI 136
              EL+ F + AN SI  MN SLM NSVGFYQI+KLSMIPV C +E VL    YSR+ K S+
Sbjct:    79 WELLWFSLVANISIAAMNFSLMLNSVGFYQISKLSMIPVVCVMEWVLHSKHYSREVKASV 138

Query:   137 LLVLFGVGVCTVTDVSVNAKGFIAAFVAVWSTAMQQYHV 175
             ++V+ GVG+CTVTDV VNAKGFI A  AV+ST++QQ  +
Sbjct:   139 MVVVVGVGICTVTDVKVNAKGFICACTAVFSTSLQQISI 177

GO:0005886 "plasma membrane" evidence=ISM

GO:0016020 "membrane" evidence=ISS

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0006863 "purine nucleobase transport" evidence=RCA

TAIR|locus:2030076 AT1G76670 [Arabidopsis thaliana (taxid:3702)]

 Score = 372 (136.0 bits), Expect = 2.8e-34, P = 2.8e-34
 Identities = 76/159 (47%), Positives = 100/159 (62%)

Query:    19 WMFNVVTSVGIIMVNKALMAT--YGFSXXXXXXXXXXXXXXMLTTFLRWLGYIQTSHLPF 76
             W  NV++SVGIIM NK LM++  +GF               ++       G   + H+P 
Sbjct:    18 WAMNVISSVGIIMANKQLMSSSGFGFGFATTLTGFHFAFTALVGMVSNATGLSASKHVPL 77

Query:    77 SELVRFVVFANFSIVGMNVSLMWNSVGFYQIAKLSMIPVSCFLEVVLDKVRYSRDTKLSI 136
              EL+ F + AN SI  MN SLM NSVGFYQI+KLSMIPV C LE +L    Y ++ K S+
Sbjct:    78 WELLWFSIVANISIAAMNFSLMLNSVGFYQISKLSMIPVVCVLEWILHSKHYCKEVKASV 137

Query:   137 LLVLFGVGVCTVTDVSVNAKGFIAAFVAVWSTAMQQYHV 175
             ++V+ GVG+CTVTDV VNAKGFI A  AV+ST++QQ  +
Sbjct:   138 MVVVIGVGICTVTDVKVNAKGFICACTAVFSTSLQQISI 176

GO:0005886 "plasma membrane" evidence=ISM

GO:0016020 "membrane" evidence=ISS

GO:0005457 "GDP-fucose transmembrane transporter activity" evidence=IDA

GO:0005459 "UDP-galactose transmembrane transporter activity" evidence=IDA

GO:0005460 "UDP-glucose transmembrane transporter activity" evidence=IDA

GO:0015783 "GDP-fucose transport" evidence=IDA

GO:0015786 "UDP-glucose transport" evidence=IDA

GO:0072334 "UDP-galactose transmembrane transport" evidence=IDA

GO:0009624 "response to nematode" evidence=IEP

GO:0006863 "purine nucleobase transport" evidence=RCA

TAIR|locus:2064316 AT2G30460 "AT2G30460" [Arabidopsis thaliana (taxid:3702)]

 Score = 237 (88.5 bits), Expect = 5.7e-20, P = 5.7e-20
 Identities = 53/153 (34%), Positives = 88/153 (57%)

Query:    22 NVVTSVGIIMVNKALMATYGFSXXXXXXXXXXXXXXMLTTFLRWLGYIQTSHLPFSE--L 79
             +VV+SV I++ NKAL++T GF+                     W+ + +  H PF    +
Sbjct:    18 SVVSSVSIVICNKALISTLGFTFATTLTSWHLLVTFCSLHVALWMKFFE--HKPFDPRAV 75

Query:    80 VRFVVFANFSIVGMNVSLMWNSVGFYQIAKLSMIPVSCFLEVVLDKVRYSRDTKLSILLV 139
             + F V    SI  +N+SL +NSVGFYQ+ KL++IP +  LE +  +  +SR  + S++++
Sbjct:    76 LGFGVLNGISIGLLNLSLGFNSVGFYQMTKLAIIPCTVVLETIFFRKMFSRKIQFSLVIL 135

Query:   140 LFGVGVCTVTDVSVNAKGFIAAFVAVWSTAMQQ 172
             L GVG+ TVTD+ +N  G + + +AV +T + Q
Sbjct:   136 LLGVGIATVTDLQLNMLGSVLSLLAVITTCVAQ 168

GO:0003674 "molecular_function" evidence=ND

GO:0005886 "plasma membrane" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0016020 "membrane" evidence=ISS

GO:0006863 "purine nucleobase transport" evidence=RCA

TAIR|locus:2033097 AT1G06890 [Arabidopsis thaliana (taxid:3702)]

 Score = 232 (86.7 bits), Expect = 2.4e-19, P = 2.4e-19
 Identities = 52/153 (33%), Positives = 87/153 (56%)

Query:    22 NVVTSVGIIMVNKALMATYGFSXXXXXXXXXXXXXXMLTTFLRWLGYIQTSHLPFSE--L 79
             +VV+SV I++ NKAL++T GF+                     W+   +  H PF    +
Sbjct:    18 SVVSSVSIVICNKALISTLGFTFATTLTSWHLLVTFCSLHVALWMKMFE--HKPFDPRAV 75

Query:    80 VRFVVFANFSIVGMNVSLMWNSVGFYQIAKLSMIPVSCFLEVVLDKVRYSRDTKLSILLV 139
             + F +    SI  +N+SL +NSVGFYQ+ KL++IP +  LE +  + ++SR  + S+ ++
Sbjct:    76 MGFGILNGISIGLLNLSLGFNSVGFYQMTKLAIIPCTVLLETLFFRKKFSRKIQFSLTIL 135

Query:   140 LFGVGVCTVTDVSVNAKGFIAAFVAVWSTAMQQ 172
             L GVG+ TVTD+ +N  G + + +AV +T + Q
Sbjct:   136 LLGVGIATVTDLQLNMLGSVLSLLAVVTTCVAQ 168

GO:0005886 "plasma membrane" evidence=ISM

GO:0016020 "membrane" evidence=ISS

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0006486 "protein glycosylation" evidence=RCA

GO:0006944 "cellular membrane fusion" evidence=RCA

GO:0048193 "Golgi vesicle transport" evidence=RCA

GO:0005768 "endosome" evidence=IDA

GO:0005802 "trans-Golgi network" evidence=IDA

TAIR|locus:504955965 AT2G28315 [Arabidopsis thaliana (taxid:3702)]

 Score = 211 (79.3 bits), Expect = 5.3e-17, P = 5.3e-17
 Identities = 46/151 (30%), Positives = 80/151 (52%)

Query:    22 NVVTSVGIIMVNKALMATYGFSXXXXXXXXXXXXXXMLTTFLRWLGYIQTSHLPFSELVR 81
             +V +SV I++ NKALM   GF                       L + +   +    +V 
Sbjct:    18 SVASSVSIVICNKALMTNLGFPFATTLTSWHLMVTYCTLHVAYKLNFFENKPIDMRTVVL 77

Query:    82 FVVFANFSIVGMNVSLMWNSVGFYQIAKLSMIPVSCFLEVVLDKVRYSRDTKLSILLVLF 141
             F +    SI  +N+SL +NS+GFYQ+ KL++IP +  LE +    ++S+  K S+ L+L 
Sbjct:    78 FGLLNGISIGLLNLSLGFNSIGFYQMTKLAIIPFTVLLETLFLNKKFSQKIKFSLFLLLV 137

Query:   142 GVGVCTVTDVSVNAKGFIAAFVAVWSTAMQQ 172
             GVG+ ++TD+ +N  G + + +A+ +T + Q
Sbjct:   138 GVGIASITDLQLNFVGSVLSLLAIATTCVGQ 168

GO:0005886 "plasma membrane" evidence=ISM

GO:0016020 "membrane" evidence=ISS

TAIR|locus:2178373 AT5G55950 [Arabidopsis thaliana (taxid:3702)]

 Score = 185 (70.2 bits), Expect = 8.1e-14, P = 8.1e-14
 Identities = 50/156 (32%), Positives = 73/156 (46%)

Query:    21 FNVVTSVGIIMVNKALMATYGFSXXXXXXXXXXXXXXMLTTFLRWLGYIQTSH----LPF 76
             FN V +VGII+ NK +M   GF+              +L  F + L  +  S      PF
Sbjct:    63 FNFVVAVGIILANKLVMGRVGFNFPIFLTLIHYTVAWILLAFFKSLSLLPMSPPSKTTPF 122

Query:    77 SELVRFVVFANFSIVGMNVSLMWNSVGFYQIAKLSMIPVSCFLEVVLDKVRYSRDTKLSI 136
             S L        F+    N SL  NSVGFYQ+AK+++ P     E VL K   S    +++
Sbjct:   123 SSLFSLGAVMAFASGLANTSLKHNSVGFYQMAKIAVTPTIVLAEFVLFKKTISSTKVMAL 182

Query:   137 LLVLFGVGVCTVTDVSVNAKGFIAAFVAVWSTAMQQ 172
              +V  GV + TVTD+  N  G + A   +  +A+ +
Sbjct:   183 AVVSLGVAIATVTDLEFNLFGALVAVAWIIPSAINK 218

GO:0055085 "transmembrane transport" evidence=IEA

GO:0016020 "membrane" evidence=ISS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: estExt_fgenesh4_pm.C_LG_II0298 hypothetical protein (337 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	204
KOG1441	316	consensus Glucose-6-phosphate/phosphate and phosph	100.0
KOG1444	314	consensus Nucleotide-sugar transporter VRG4/SQV-7	99.95
PTZ00343	350	triose or hexose phosphate/phosphate translocator;	99.95
TIGR00817	302	tpt Tpt phosphate/phosphoenolpyruvate translocator	99.93
KOG1443	349	consensus Predicted integral membrane protein [Fun	99.89
COG5070	309	VRG4 Nucleotide-sugar transporter [Carbohydrate tr	99.86
PF08449	303	UAA: UAA transporter family; InterPro: IPR013657 T	99.85
KOG1442	347	consensus GDP-fucose transporter [Carbohydrate tra	99.82
KOG1583	330	consensus UDP-N-acetylglucosamine transporter [Car	99.45
KOG1582	367	consensus UDP-galactose transporter related protei	99.38
PF06027	334	DUF914: Eukaryotic protein of unknown function (DU	99.3
KOG1580	337	consensus UDP-galactose transporter related protei	99.28
KOG1581	327	consensus UDP-galactose transporter related protei	99.23
TIGR00950	260	2A78 Carboxylate/Amino Acid/Amine Transporter.	99.19
PRK11689	295	aromatic amino acid exporter; Provisional	99.12
PRK11272	292	putative DMT superfamily transporter inner membran	99.07
PRK11453	299	O-acetylserine/cysteine export protein; Provisiona	98.96
PLN00411	358	nodulin MtN21 family protein; Provisional	98.96
TIGR00688	256	rarD rarD protein. This uncharacterized protein is	98.95
PF04142	244	Nuc_sug_transp: Nucleotide-sugar transporter; Inte	98.89
PRK15430	296	putative chloramphenical resistance permease RarD;	98.87
PRK10532	293	threonine and homoserine efflux system; Provisiona	98.77
PF00892	126	EamA: EamA-like transporter family; InterPro: IPR0	98.76
KOG2765	416	consensus Predicted membrane protein [Function unk	98.64
TIGR03340	281	phn_DUF6 phosphonate utilization associated putati	98.61
COG0697	292	RhaT Permeases of the drug/metabolite transporter	98.6
PF13536	113	EmrE: Multidrug resistance efflux transporter	98.48
KOG3912	372	consensus Predicted integral membrane protein [Gen	98.38
TIGR00776	290	RhaT RhaT L-rhamnose-proton symporter family prote	98.12
KOG2234	345	consensus Predicted UDP-galactose transporter [Car	97.95
TIGR00950	260	2A78 Carboxylate/Amino Acid/Amine Transporter.	97.94
KOG4314	290	consensus Predicted carbohydrate/phosphate translo	97.78
PRK15051	111	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	97.74
KOG4510	346	consensus Permease of the drug/metabolite transpor	97.54
TIGR00803	222	nst UDP-galactose transporter. NSTs generally appe	97.43
COG2510	140	Predicted membrane protein [Function unknown]	97.43
PRK11272	292	putative DMT superfamily transporter inner membran	97.4
PF03151	153	TPT: Triose-phosphate Transporter family; InterPro	97.36
PLN00411	358	nodulin MtN21 family protein; Provisional	97.29
PRK10452	120	multidrug efflux system protein MdtJ; Provisional	97.08
PRK11431	105	multidrug efflux system protein; Provisional	97.02
PRK09541	110	emrE multidrug efflux protein; Reviewed	97.01
COG5006	292	rhtA Threonine/homoserine efflux transporter [Amin	97.01
PRK10650	109	multidrug efflux system protein MdtI; Provisional	96.89
TIGR00817	302	tpt Tpt phosphate/phosphoenolpyruvate translocator	96.81
PRK02971	129	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	96.7
PRK10532	293	threonine and homoserine efflux system; Provisiona	96.65
COG2076	106	EmrE Membrane transporters of cations and cationic	96.64
PRK11689	295	aromatic amino acid exporter; Provisional	96.5
PTZ00343	350	triose or hexose phosphate/phosphate translocator;	96.47
PRK15430	296	putative chloramphenical resistance permease RarD;	96.43
PRK11453	299	O-acetylserine/cysteine export protein; Provisiona	96.26
PF00893	93	Multi_Drug_Res: Small Multidrug Resistance protein	96.25
TIGR03340	281	phn_DUF6 phosphonate utilization associated putati	96.21
KOG2766	336	consensus Predicted membrane protein [Function unk	96.05
PF08449	303	UAA: UAA transporter family; InterPro: IPR013657 T	95.48
COG0697	292	RhaT Permeases of the drug/metabolite transporter	95.46
PF06027	334	DUF914: Eukaryotic protein of unknown function (DU	95.17
COG2962	293	RarD Predicted permeases [General function predict	95.0
PF05653	300	Mg_trans_NIPA: Magnesium transporter NIPA; InterPr	94.96
TIGR00776	290	RhaT RhaT L-rhamnose-proton symporter family prote	94.91
PF10639	113	UPF0546: Uncharacterised protein family UPF0546; I	94.56
PF06800	269	Sugar_transport: Sugar transport protein; InterPro	91.88
COG5006	292	rhtA Threonine/homoserine efflux transporter [Amin	91.85
TIGR00803	222	nst UDP-galactose transporter. NSTs generally appe	89.75
PF06800	269	Sugar_transport: Sugar transport protein; InterPro	84.83
COG2962	293	RarD Predicted permeases [General function predict	84.57
KOG2922	335	consensus Uncharacterized conserved protein [Funct	80.65

>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]

Probab=100.00  E-value=6.7e-34  Score=244.65  Aligned_cols=189  Identities=31%  Similarity=0.394  Sum_probs=175.2

Q ss_pred             CCccccccccchhHHHHHHHHHHHHHHHHHHHHHHhhhcCCCchhhHHHHHHHHHHHHHHHHHHhCCccCCC----CCch
Q 043019            2 SSTTKAADRKAATDVAAWMFNVVTSVGIIMVNKALMATYGFSFATTLTGLHFATTTMLTTFLRWLGYIQTSH----LPFS   77 (204)
Q Consensus         2 ~~~~~~~~~~~~~~~~~w~~~~~~S~~~~~~NK~il~~~~f~~P~~Lt~~q~~~~~~~~~i~~~~~~~~~~~----~~~~   77 (204)
                      +++.+..+++......+|..++.+|++.++.||++++.++||||+++|.+|.+++++...+.+.+|..++++    .+++
T Consensus         5 ~~~~~~~~~~~~~~~~~~~~w~~~~v~~~~~nK~il~~~~f~~p~~lt~~~~~~~~l~~~v~~~l~~~~~~~~~~~~~~~   84 (316)
T KOG1441|consen    5 SEPASGQLKKILRIGIAFAIWYVLSVGVIILNKYILSKYGFPFPITLTMLHLFCGALALLVIKVLKLVPPSKISSKLPLR   84 (316)
T ss_pred             ccCcccccchhHHHHHHHHHHhhhheeeEEeeHhhhccCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCCccccccchH
Confidence            455556677777777777788899999999999999999999999999999999999999999999887665    3579


Q ss_pred             hHHHHHHHHHHHHHHhhhhhccchHHHHHHHhhhhhHHHHHHHHHhcceecCcchhhhhhhhhhhheeeeeccccccHHH
Q 043019           78 ELVRFVVFANFSIVGMNVSLMWNSVGFYQIAKLSMIPVSCFLEVVLDKVRYSRDTKLSILLVLFGVGVCTVTDVSVNAKG  157 (204)
Q Consensus        78 ~~~plsl~~~~~i~~~n~sl~~~svs~~qi~K~~~pv~~~l~~~~~~~~~~s~~~~~sl~~i~~Gv~~~~~~d~~~~~~G  157 (204)
                      +++|+|+++++++.++|.|++++||||+|++|+++|++++++++++.+|++++.+++++++++.||++++++|.+||+.|
T Consensus        85 ~llpl~~~~~~~~v~~n~Sl~~v~VsF~q~iKa~~P~~tvl~~~~~~~~~~s~~~~lsL~piv~GV~ias~~e~~fn~~G  164 (316)
T KOG1441|consen   85 TLLPLGLVFCISHVLGNVSLSYVPVSFYQTIKALMPPFTVLLSVLLLGKTYSSMTYLSLLPIVFGVAIASVTELSFNLFG  164 (316)
T ss_pred             HHHHHHHHHHHHHHhcchhhhccchhHHHHHHhhcchhHHHHHHHHhCCCCcceEEEEEEEeeeeEEEeeeccccccHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHhhhccccccccchh
Q 043019          158 FIAAFVAVWSTAMQQYHVILNISVSITHLFLCL  190 (204)
Q Consensus       158 ~~~~l~s~~~~a~~~i~~~~~~~~~~~~~~~~~  190 (204)
                      ++.++++++.+++++|+.|+.+++++++++++.
T Consensus       165 ~i~a~~s~~~~al~~I~~~~ll~~~~~~~~~~~  197 (316)
T KOG1441|consen  165 FISAMISNLAFALRNILSKKLLTSKGESLNSMN  197 (316)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhhccccccCchH
Confidence            999999999999999999998877788887764

>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]

Probab=99.95  E-value=5.1e-28  Score=205.41  Aligned_cols=188  Identities=18%  Similarity=0.236  Sum_probs=174.3

Q ss_pred             cchhHHHHHHHHHHHHHHHHHHHHHHhhhcCCCchhhHHHHHHHHHHHHHHHHHHhCCccCCCCCc---hhHHHHHHHHH
Q 043019           11 KAATDVAAWMFNVVTSVGIIMVNKALMATYGFSFATTLTGLHFATTTMLTTFLRWLGYIQTSHLPF---SELVRFVVFAN   87 (204)
Q Consensus        11 ~~~~~~~~w~~~~~~S~~~~~~NK~il~~~~f~~P~~Lt~~q~~~~~~~~~i~~~~~~~~~~~~~~---~~~~plsl~~~   87 (204)
                      ++...+++|+   ++|+.+++.||++++.++||-.+++...|++++.+...+.+++|.++.+++++   |+|+|+++.+.
T Consensus        12 ~~l~sa~~Y~---~sS~lm~vvNK~vls~y~f~~~l~l~~~Q~l~s~~~v~~lk~~~lv~~~~l~~~~~kk~~P~~~lf~   88 (314)
T KOG1444|consen   12 SPLLSALFYC---LSSILMTVVNKIVLSSYNFPMGLLLMLLQSLASVLVVLVLKRLGLVNFRPLDLRTAKKWFPVSLLFV   88 (314)
T ss_pred             hhhHHHHHHH---HHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHhceeecCCcChHHHHHHccHHHHHH
Confidence            4567788888   99999999999999998777667777799999999999999999999988874   89999999999


Q ss_pred             HHHHHhhhhhccchHHHHHHHhhhhhHHHHHHHHHhcceecCcchhhhhhhhhhhheeeeeccccccHHHHHHHHHHHHH
Q 043019           88 FSIVGMNVSLMWNSVGFYQIAKLSMIPVSCFLEVVLDKVRYSRDTKLSILLVLFGVGVCTVTDVSVNAKGFIAAFVAVWS  167 (204)
Q Consensus        88 ~~i~~~n~sl~~~svs~~qi~K~~~pv~~~l~~~~~~~~~~s~~~~~sl~~i~~Gv~~~~~~d~~~~~~G~~~~l~s~~~  167 (204)
                      +++..+..+++|.|||+++++|+.+|+++++.|.+++|+|+++.++.++..+.+|...+..+|.++|..|+.|+..+++.
T Consensus        89 ~~i~t~~~slk~lnVpm~tv~kn~tii~~ai~E~lf~~~~~~~~v~~Sv~~m~~~s~~~~~~d~sf~~~gY~w~~~n~~~  168 (314)
T KOG1444|consen   89 GMLFTGSKSLKYLNVPMFTVFKNLTIILTAIGEVLFFGKRPSNKVWASVFAMIIGSVAAAFTDLSFNLRGYSWALANCLT  168 (314)
T ss_pred             HHHHHccccccccCchHHHHHhhchHHHHHHhHHhhcCcCchhhHHHHHHHHHHHHHhhccccceecchhHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhhhccccccccch-hhhhhhhhceee
Q 043019          168 TAMQQYHVILNISVSITHLFLC-LNHHIVCIPVVV  201 (204)
Q Consensus       168 ~a~~~i~~~~~~~~~~~~~~~~-~~~~~~slp~~~  201 (204)
                      ++.+.++.||..+.++.+..+. +||+..++|.+.
T Consensus       169 ~a~~~v~~kk~vd~~~l~~~~lv~yNnl~~L~~l~  203 (314)
T KOG1444|consen  169 TAAFVVYVKKSVDSANLNKFGLVFYNNLLSLPPLL  203 (314)
T ss_pred             HHHHHHHHHHhhccccccceeEEeehhHHHHHHHH
Confidence            9999999999777777666555 799999999764

>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional

Probab=99.95  E-value=4e-27  Score=206.69  Aligned_cols=167  Identities=14%  Similarity=0.207  Sum_probs=150.7

Q ss_pred             cccchhHHHHHHHHHHHHHHHHHHHHHHhhhcCCCchhhHHHHHHHHHHHHHHHHHHhCCccCCCC-----CchhHHHHH
Q 043019            9 DRKAATDVAAWMFNVVTSVGIIMVNKALMATYGFSFATTLTGLHFATTTMLTTFLRWLGYIQTSHL-----PFSELVRFV   83 (204)
Q Consensus         9 ~~~~~~~~~~w~~~~~~S~~~~~~NK~il~~~~f~~P~~Lt~~q~~~~~~~~~i~~~~~~~~~~~~-----~~~~~~pls   83 (204)
                      |-|....++.|+   .+|+..++.||+++++  +|||++++++|++++++.+.+.+..+..+.+++     ++++++|+|
T Consensus        47 ~~~~~~~~~~wy---~~s~~~~~~nK~vl~~--~~~P~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~llp~g  121 (350)
T PTZ00343         47 KWKLALLFLTWY---ALNVLYVVDNKLALNM--LPLPWTISSLQLFVGWLFALLYWATGFRKIPRIKSLKLFLKNFLPQG  121 (350)
T ss_pred             cHHHHHHHHHHH---HHHHHHHHHHHHHHHh--CChhHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHHH
Confidence            345566888888   9999999999999987  899999999999999998887777665443333     357899999


Q ss_pred             HHHHHHHHHhhhhhccchHHHHHHHhhhhhHHHHHHHHHhcceecCcchhhhhhhhhhhheeeeeccccccHHHHHHHHH
Q 043019           84 VFANFSIVGMNVSLMWNSVGFYQIAKLSMIPVSCFLEVVLDKVRYSRDTKLSILLVLFGVGVCTVTDVSVNAKGFIAAFV  163 (204)
Q Consensus        84 l~~~~~i~~~n~sl~~~svs~~qi~K~~~pv~~~l~~~~~~~~~~s~~~~~sl~~i~~Gv~~~~~~d~~~~~~G~~~~l~  163 (204)
                      +++.......|.|+++.+++++|++|+++|+++++++++++|||++++++++++++++|+++++.+|.++++.|.+++++
T Consensus       122 l~~~~~~~~~~~sl~~~svs~~~iika~~Pvft~lls~~~l~ek~s~~~~l~l~l~v~Gv~l~~~~~~~~~~~G~~~~l~  201 (350)
T PTZ00343        122 LCHLFVHFGAVISMGLGAVSFTHVVKAAEPVFTALLSILFLKQFLNLYAYLSLIPIVGGVALASVKELHFTWLAFWCAML  201 (350)
T ss_pred             HHHHHHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHheecccchhHHHHHHHHHH
Confidence            99998888899999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhhhc
Q 043019          164 AVWSTAMQQYHVILNIS  180 (204)
Q Consensus       164 s~~~~a~~~i~~~~~~~  180 (204)
                      |+++.|+|+++.||.+.
T Consensus       202 s~~~~a~~~i~~k~~~~  218 (350)
T PTZ00343        202 SNLGSSLRSIFAKKTMK  218 (350)
T ss_pred             HHHHHHHHHHHHHHHhc
Confidence            99999999999999553

>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator

Probab=99.93  E-value=4.8e-25  Score=189.15  Aligned_cols=164  Identities=19%  Similarity=0.212  Sum_probs=147.7

Q ss_pred             chhHHHHHHHHHHHHHHHHHHHHHHhhhcCCCchhhHHHHHHHHHHHHHHHHHHhCCccCCCCC---chhHHHHHHHHHH
Q 043019           12 AATDVAAWMFNVVTSVGIIMVNKALMATYGFSFATTLTGLHFATTTMLTTFLRWLGYIQTSHLP---FSELVRFVVFANF   88 (204)
Q Consensus        12 ~~~~~~~w~~~~~~S~~~~~~NK~il~~~~f~~P~~Lt~~q~~~~~~~~~i~~~~~~~~~~~~~---~~~~~plsl~~~~   88 (204)
                      ....++.|+   .+|++++++||+++++  |++|+.+++.|+.++++.+.+.++.+..+.++.+   +++++|.|++++.
T Consensus         3 ~~~~~~~w~---~~~~~~~~~NK~~l~~--~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~   77 (302)
T TIGR00817         3 TGLLFGLWY---FLNVYFNIYNKKLLNV--FPYPYFKTLISLAVGSLYCLLSWSSGLPKRLKISSALLKLLLPVAIVHTI   77 (302)
T ss_pred             HHHHHHHHH---HHHHHHHHHHHHHHhh--CChhHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHHHH
Confidence            345678888   9999999999999986  8999999999999999888887655544444443   5789999999999


Q ss_pred             HHHHhhhhhccchHHHHHHHhhhhhHHHHHHHHHhcceecCcchhhhhhhhhhhheeeeeccccccHHHHHHHHHHHHHH
Q 043019           89 SIVGMNVSLMWNSVGFYQIAKLSMIPVSCFLEVVLDKVRYSRDTKLSILLVLFGVGVCTVTDVSVNAKGFIAAFVAVWST  168 (204)
Q Consensus        89 ~i~~~n~sl~~~svs~~qi~K~~~pv~~~l~~~~~~~~~~s~~~~~sl~~i~~Gv~~~~~~d~~~~~~G~~~~l~s~~~~  168 (204)
                      +..++|.++++.|++++|++|+++|+++++++++++|||++++++.++++.++|+++.+.+|.+++..|..+++.+.++.
T Consensus        78 ~~~~~~~~l~~~s~s~~~li~~~~Pv~~~ll~~~~~~e~~~~~~~~~l~l~~~Gv~l~~~~~~~~~~~G~~~~l~a~~~~  157 (302)
T TIGR00817        78 GHVTSNVSLSKVAVSFTHTIKAMEPFFSVVLSAFFLGQEFPSTLWLSLLPIVGGVALASDTELSFNWAGFLSAMISNITF  157 (302)
T ss_pred             HHHHHHHHHHhccHHHHHHHHhcchHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHhhhcCCcccccHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999988888889999999999999999


Q ss_pred             HHHHHHHHhhhc
Q 043019          169 AMQQYHVILNIS  180 (204)
Q Consensus       169 a~~~i~~~~~~~  180 (204)
                      |+|+++.||.++
T Consensus       158 a~~~v~~k~~~~  169 (302)
T TIGR00817       158 VSRNIFSKKAMT  169 (302)
T ss_pred             HHHHHHHHHhhc
Confidence            999999999443

specificities overlap.

>KOG1443 consensus Predicted integral membrane protein [Function unknown]

Probab=99.89  E-value=2e-23  Score=176.07  Aligned_cols=158  Identities=20%  Similarity=0.277  Sum_probs=140.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhhcCCCchhhHHHHHHHHHHHHHHHHHHhCCcc-CC---CCCc----hhHHHHHHHHH
Q 043019           16 VAAWMFNVVTSVGIIMVNKALMATYGFSFATTLTGLHFATTTMLTTFLRWLGYIQ-TS---HLPF----SELVRFVVFAN   87 (204)
Q Consensus        16 ~~~w~~~~~~S~~~~~~NK~il~~~~f~~P~~Lt~~q~~~~~~~~~i~~~~~~~~-~~---~~~~----~~~~plsl~~~   87 (204)
                      +..||   .+|+++.++|||.-.+  |+||++++.+|+++-+.++...++....+ ++   +++|    |+..|.|++.+
T Consensus        21 Vl~yY---~~Si~Ltf~~~~~~~~--f~fPLf~ts~h~~v~flfa~~~~~l~~~~~~r~r~~~sw~~~Lr~~aPtalata   95 (349)
T KOG1443|consen   21 VLLYY---FLSIGLTFYFKWLTKN--FHFPLFVTSLHLAVKFLFAALSRRLYQCSVPRARVVLSWRDYLRRLAPTALATA   95 (349)
T ss_pred             HHHHH---HHHHHHHHHhhhhhcC--cCCchHHHHHHHHHHHHHHHHHHHHHhccCCccccCCcHHHHHHHhhhhhhhhh
Confidence            34555   9999999999998765  89999999999999999998876643222 22   3444    66779999999


Q ss_pred             HHHHHhhhhhccchHHHHHHHhhhhhHHHHHHHHHhcceecCcchhhhhhhhhhhheeeeeccccccHHHHHHHHHHHHH
Q 043019           88 FSIVGMNVSLMWNSVGFYQIAKLSMIPVSCFLEVVLDKVRYSRDTKLSILLVLFGVGVCTVTDVSVNAKGFIAAFVAVWS  167 (204)
Q Consensus        88 ~~i~~~n~sl~~~svs~~qi~K~~~pv~~~l~~~~~~~~~~s~~~~~sl~~i~~Gv~~~~~~d~~~~~~G~~~~l~s~~~  167 (204)
                      .+++++|+|++|+++++|++.|+++++|+.+++..|.-||+++.-.+.+++|.+|+.+.++++.+||..|+.+.+.+.++
T Consensus        96 ~DIGLSN~sl~yVtlSlYTM~KSSsi~FIllFs~if~lEk~~w~L~l~v~lI~~Glflft~KsTqf~i~Gf~lv~~aS~~  175 (349)
T KOG1443|consen   96 LDIGLSNWSLEYVTLSLYTMTKSSSILFILLFSLIFKLEKFRWALVLIVLLIAVGLFLFTYKSTQFNIEGFFLVLAASLL  175 (349)
T ss_pred             cccccccceeeeeeeeeeeeccccHHHHHHHHHHHHHhHHHHHHHHHHHHHHhhheeEEEecccceeehhHHHHHHHHHh
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhh
Q 043019          168 TAMQQYHVILN  178 (204)
Q Consensus       168 ~a~~~i~~~~~  178 (204)
                      +++.-.+.++.
T Consensus       176 sGlRW~~tQ~l  186 (349)
T KOG1443|consen  176 SGLRWAFTQML  186 (349)
T ss_pred             hhhhHHHHHHH
Confidence            99877777773

>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]

Probab=99.86  E-value=3e-22  Score=162.83  Aligned_cols=190  Identities=17%  Similarity=0.188  Sum_probs=170.4

Q ss_pred             ccchhHHHHHHHHHHHHHHHHHHHHHHhhhcCCCchhhHHHHHHHHHHHHHHHHHHhCCccCCCCCchhHHHHHHHHHHH
Q 043019           10 RKAATDVAAWMFNVVTSVGIIMVNKALMATYGFSFATTLTGLHFATTTMLTTFLRWLGYIQTSHLPFSELVRFVVFANFS   89 (204)
Q Consensus        10 ~~~~~~~~~w~~~~~~S~~~~~~NK~il~~~~f~~P~~Lt~~q~~~~~~~~~i~~~~~~~~~~~~~~~~~~plsl~~~~~   89 (204)
                      +......+.|.   ..|+.+++.||++++..||+....+.+.|-.++.+.+.+.++.|..+.+..+.|+|+|.+++-..+
T Consensus         5 ~s~~~~~lsYc---~sSIlmTltNKyVls~~gfnMnflll~vQSlvcvv~l~iLk~l~~~~fR~t~aK~WfpiSfLLv~M   81 (309)
T COG5070           5 VSELTASLSYC---FSSILMTLTNKYVLSNLGFNMNFLLLAVQSLVCVVGLLILKFLRLVEFRLTKAKKWFPISFLLVVM   81 (309)
T ss_pred             cccchHHHHHH---HHHHHHHHhhHheecCCCCchhhHHHHHHHHHHHHHHHHHHHHhHhheehhhhhhhcCHHHHHHHH
Confidence            34556778888   999999999999999999999999999999999999999999988877755689999999999999


Q ss_pred             HHHhhhhhccchHHHHHHHhhhhhHHHHHHHHHhcceecCcchhhhhhhhhhhheeeeecccccc-------HHHHHHHH
Q 043019           90 IVGMNVSLMWNSVGFYQIAKLSMIPVSCFLEVVLDKVRYSRDTKLSILLVLFGVGVCTVTDVSVN-------AKGFIAAF  162 (204)
Q Consensus        90 i~~~n~sl~~~svs~~qi~K~~~pv~~~l~~~~~~~~~~s~~~~~sl~~i~~Gv~~~~~~d~~~~-------~~G~~~~l  162 (204)
                      +..+..|++|.++|.|+++|.++++.++.+|..++|+|.+.....+.++|+..-..+.++|.|-.       -.|+.|+.
T Consensus        82 Iyt~SKsLqyL~vpiYTiFKNltII~iAygEvl~Fgg~vtsl~l~SFilMvlSS~va~w~D~q~~~~~~~~lN~GY~Wm~  161 (309)
T COG5070          82 IYTSSKSLQYLAVPIYTIFKNLTIILIAYGEVLFFGGRVTSLELLSFILMVLSSVVATWGDQQASAFKAQILNPGYLWMF  161 (309)
T ss_pred             HHhcccceeeeeeeHHHHhccceeehhHhhHHHHhcCccchhhHHHHHHHHHHHHHhccchhhHHHHHhcccCCceEEEe
Confidence            99999999999999999999999999999999999999999999999999999999999998422       24999999


Q ss_pred             HHHHHHHHHHHHHHhhhccccccc-cchhhhhhhhhceeee
Q 043019          163 VAVWSTAMQQYHVILNISVSITHL-FLCLNHHIVCIPVVVV  202 (204)
Q Consensus       163 ~s~~~~a~~~i~~~~~~~~~~~~~-~~~~~~~~~slp~~~~  202 (204)
                      .+++.+|.+....||..+-++++. +.++||+.+|+|+++.
T Consensus       162 ~NclssaafVL~mrkri~ltNf~d~dtmfYnNllslPiL~~  202 (309)
T COG5070         162 TNCLSSAAFVLIMRKRIKLTNFKDFDTMFYNNLLSLPILLS  202 (309)
T ss_pred             hhhHhHHHHHHHHHHhhcccccchhhHHHHhhhHHHHHHHH
Confidence            999999999999998655555444 5579999999998764

>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []

Probab=99.85  E-value=2.6e-20  Score=160.31  Aligned_cols=172  Identities=23%  Similarity=0.257  Sum_probs=144.9

Q ss_pred             HHHHHHHhhh-cCCCchhhHHHHHHHHHHHHHHHHHHhCC-ccCCCCCchhHHHHHHHHHHHHHHhhhhhccchHHHHHH
Q 043019           30 IMVNKALMAT-YGFSFATTLTGLHFATTTMLTTFLRWLGY-IQTSHLPFSELVRFVVFANFSIVGMNVSLMWNSVGFYQI  107 (204)
Q Consensus        30 ~~~NK~il~~-~~f~~P~~Lt~~q~~~~~~~~~i~~~~~~-~~~~~~~~~~~~plsl~~~~~i~~~n~sl~~~svs~~qi  107 (204)
                      .++++.+.+. ++.+||.+++++|++++.+...+...... .++++.+++++++.++++.++..++|.|++|+|+|++++
T Consensus        16 g~~qE~i~~~~~~~~~~~~lt~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~i~~p~~~~   95 (303)
T PF08449_consen   16 GILQEKIMTTPYGSPFPLFLTFVQFAFNALFSFILLSLFKFPKSRKIPLKKYAILSFLFFLASVLSNAALKYISYPTQIV   95 (303)
T ss_pred             HHHHHHHHcCCCCCcccHHHHHHHHHHHHHHHHHHHHhccccCCCcChHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHH
Confidence            3566666665 44459999999999999999888665544 456677899999999999999999999999999999999


Q ss_pred             HhhhhhHHHHHHHHHhcceecCcchhhhhhhhhhhheeeeecccc----cc------HHHHHHHHHHHHHHHHHHHHHHh
Q 043019          108 AKLSMIPVSCFLEVVLDKVRYSRDTKLSILLVLFGVGVCTVTDVS----VN------AKGFIAAFVAVWSTAMQQYHVIL  177 (204)
Q Consensus       108 ~K~~~pv~~~l~~~~~~~~~~s~~~~~sl~~i~~Gv~~~~~~d~~----~~------~~G~~~~l~s~~~~a~~~i~~~~  177 (204)
                      .|++.|+++++++++++|||++++++++++++++|++++..+|.+    .+      ..|+++.+.+.+++|++.++.+|
T Consensus        96 ~ks~~~i~vmi~~~l~~~k~y~~~~~~~v~li~~Gv~~~~~~~~~~~~~~~~~~~~~~~G~~ll~~sl~~~a~~~~~qe~  175 (303)
T PF08449_consen   96 FKSSKPIPVMILGVLILGKRYSRRQYLSVLLITIGVAIFTLSDSSSSSSSNSSSFSSALGIILLLLSLLLDAFTGVYQEK  175 (303)
T ss_pred             HhhhHHHHHHHHHHHhcCccccHHHHHHHHHHHhhHheeeecccccccccccccccchhHHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999999999999999999999999999999988742    11      23999999999999999999999


Q ss_pred             h-hccccccccchhhhhhhhhceee
Q 043019          178 N-ISVSITHLFLCLNHHIVCIPVVV  201 (204)
Q Consensus       178 ~-~~~~~~~~~~~~~~~~~slp~~~  201 (204)
                      . .+.+....+.++|+|..++|...
T Consensus       176 ~~~~~~~~~~~~mfy~n~~~~~~~~  200 (303)
T PF08449_consen  176 LFKKYGKSPWELMFYTNLFSLPFLL  200 (303)
T ss_pred             HHHHhCCcHHHHHHHHHHHHHHHHH
Confidence            3 23333444556899999988654

; GO: 0055085 transmembrane transport

>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]

Probab=99.82  E-value=2.2e-21  Score=161.81  Aligned_cols=155  Identities=22%  Similarity=0.238  Sum_probs=138.8

Q ss_pred             HHHHHHHHHHHHHhhh--cCCCchhhHHHHHHHHHHHHHHHHHHh-----CCccCCC--CC---chhHHHHHHHHHHHHH
Q 043019           24 VTSVGIIMVNKALMAT--YGFSFATTLTGLHFATTTMLTTFLRWL-----GYIQTSH--LP---FSELVRFVVFANFSIV   91 (204)
Q Consensus        24 ~~S~~~~~~NK~il~~--~~f~~P~~Lt~~q~~~~~~~~~i~~~~-----~~~~~~~--~~---~~~~~plsl~~~~~i~   91 (204)
                      .+|++++|.||++++.  ...+-|++.+++|.+++..++.+..+.     +.++.++  ++   .++++|+++++.+++.
T Consensus        38 v~SI~~vf~nk~llss~~~~Ld~plf~t~~qcLvt~~~c~~ls~ls~k~~~~ftfp~~~ldl~t~r~vlplsvVfi~mI~  117 (347)
T KOG1442|consen   38 VTSIGLVFLNKHLLSSLVVILDAPLFITWYQCLVTTSICLVLSSLSVKYPGLFTFPSLQLDLATARQVLPLSVVFILMIS  117 (347)
T ss_pred             eeeehhhhhHHHHhhchhhhcCcHHHHHHHHHHHHHHHHHHHHHHHhhccceeccCcccccHHHHHhhcchhheeeeehh
Confidence            6999999999999996  556779999999999999998886553     2222233  33   3889999999999999


Q ss_pred             HhhhhhccchHHHHHHHhhhhhHHHHHHHHHhcceecCcchhhhhhhhhhhheeeeecc---ccccHHHHHHHHHHHHHH
Q 043019           92 GMNVSLMWNSVGFYQIAKLSMIPVSCFLEVVLDKVRYSRDTKLSILLVLFGVGVCTVTD---VSVNAKGFIAAFVAVWST  168 (204)
Q Consensus        92 ~~n~sl~~~svs~~qi~K~~~pv~~~l~~~~~~~~~~s~~~~~sl~~i~~Gv~~~~~~d---~~~~~~G~~~~l~s~~~~  168 (204)
                      ++|++++|++|+||++-|+.+.+|++++.|+++|+|.+.....++.+++.|..+..-.|   ..+++.|.++++.++++.
T Consensus       118 fnnlcL~yVgVaFYyvgRsLttvFtVlLtyvllkqkTs~~~~~~C~lIi~GF~lGvdqE~~~~~ls~~GvifGVlaSl~v  197 (347)
T KOG1442|consen  118 FNNLCLKYVGVAFYYVGRSLTTVFTVLLTYVLLKQKTSFFALGCCLLIILGFGLGVDQEGSTGTLSWIGVIFGVLASLAV  197 (347)
T ss_pred             ccceehhhcceEEEEeccchhhhHHHHhHHhhcccccccccceeehhheehheeccccccccCccchhhhHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999988777   568999999999999999


Q ss_pred             HHHHHHHHhh
Q 043019          169 AMQQYHVILN  178 (204)
Q Consensus       169 a~~~i~~~~~  178 (204)
                      |+..+++||.
T Consensus       198 Alnaiytkk~  207 (347)
T KOG1442|consen  198 ALNAIYTKKV  207 (347)
T ss_pred             HHHHHhhhee
Confidence            9999999983

>KOG1583 consensus UDP-N-acetylglucosamine transporter [Carbohydrate transport and metabolism]

Probab=99.45  E-value=2.1e-14  Score=120.32  Aligned_cols=158  Identities=16%  Similarity=0.141  Sum_probs=127.0

Q ss_pred             hhhHHHHHHHHHHHHHHH-HHHhCCccCCCCCchhHHHHHHHHHHHHHHhhhhhccc-hHHHHHHHhhhhhHHHHHHHHH
Q 043019           45 ATTLTGLHFATTTMLTTF-LRWLGYIQTSHLPFSELVRFVVFANFSIVGMNVSLMWN-SVGFYQIAKLSMIPVSCFLEVV  122 (204)
Q Consensus        45 P~~Lt~~q~~~~~~~~~i-~~~~~~~~~~~~~~~~~~plsl~~~~~i~~~n~sl~~~-svs~~qi~K~~~pv~~~l~~~~  122 (204)
                      ..++|+.||++.++--.+ ..+++..| +++|+|.+......|.+.-.++|.+++++ |+|.|.++|+.+++.+|.++++
T Consensus        33 gNLITFaqFlFia~eGlif~skf~~~k-~kiplk~Y~i~V~mFF~vnv~NN~al~f~I~~PlHiIfRsgsll~nM~~g~i  111 (330)
T KOG1583|consen   33 GNLITFAQFLFIATEGLIFTSKFFTVK-PKIPLKDYAITVAMFFIVNVTNNYALKFNIPMPLHIIFRSGSLLANMILGWI  111 (330)
T ss_pred             eeehHHHHHHHHHHhceeeeccccccC-CCCchhhhheehheeeeeeeeccceeeecccceEEEEEecCcHHHHHHHHHH
Confidence            588999999986655444 23444444 67888888877776666678999999987 9999999999999999999999


Q ss_pred             hcceecCcchhhhhhhhhhhheeeeec---ccc--------------cc--HHHHHHHHHHHHHHHHHHHHHHh-hhccc
Q 043019          123 LDKVRYSRDTKLSILLVLFGVGVCTVT---DVS--------------VN--AKGFIAAFVAVWSTAMQQYHVIL-NISVS  182 (204)
Q Consensus       123 ~~~~~~s~~~~~sl~~i~~Gv~~~~~~---d~~--------------~~--~~G~~~~l~s~~~~a~~~i~~~~-~~~~~  182 (204)
                      +.|||+|.+++.|++.+.+|+.+++..   |.+              +-  ..|+.+..++.+.+|.-.++.++ .++..
T Consensus       112 l~~k~Ys~~Qy~Sv~~iTiGiiIcTl~s~~d~~~~~~~l~~~~~~~~~~~w~iGi~lL~~al~~sa~mgiyqE~~Y~kyG  191 (330)
T KOG1583|consen  112 LLGKRYSLRQYSSVLMITIGIIICTLFSSKDGRSKLSGLDSGSAQSDFFWWLIGIALLVFALLLSAYMGIYQETTYQKYG  191 (330)
T ss_pred             hccceeehhhhhhHHhhhhhheeEEeecCcchhhhhcccccCcccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            999999999999999999999998854   211              11  35888888899999877777666 24566


Q ss_pred             cccccchhhhhhhhhceeeee
Q 043019          183 ITHLFLCLNHHIVCIPVVVVV  203 (204)
Q Consensus       183 ~~~~~~~~~~~~~slp~~~~~  203 (204)
                      +.+.+.++|+|.+|+|.+++.
T Consensus       192 Kh~~EalFytH~LsLP~Flf~  212 (330)
T KOG1583|consen  192 KHWKEALFYTHFLSLPLFLFM  212 (330)
T ss_pred             CChHHHHHHHHHhccchHHHh
Confidence            666677999999999998753

>KOG1582 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=99.38  E-value=5.8e-13  Score=111.61  Aligned_cols=147  Identities=16%  Similarity=0.109  Sum_probs=127.0

Q ss_pred             HHHHHhhhcCCC-chhhHHHHHHHHHHHHHHHHHHhCCccCCCCCchhHHHHHHHHHHHHHHhhhhhccchHHHHHHHhh
Q 043019           32 VNKALMATYGFS-FATTLTGLHFATTTMLTTFLRWLGYIQTSHLPFSELVRFVVFANFSIVGMNVSLMWNSVGFYQIAKL  110 (204)
Q Consensus        32 ~NK~il~~~~f~-~P~~Lt~~q~~~~~~~~~i~~~~~~~~~~~~~~~~~~plsl~~~~~i~~~n~sl~~~svs~~qi~K~  110 (204)
                      ..+++++..||+ |.|.+|..|+++-..+-.+....=..+++..|||....++.+..+++.++|-|+.|.+.|...++|+
T Consensus        61 ~qElif~~~gfkp~GWylTlvQf~~Ysg~glie~~~~~~k~r~iP~rtY~~la~~t~gtmGLsn~SlgYLNYPtQviFKc  140 (367)
T KOG1582|consen   61 LQELIFNVEGFKPFGWYLTLVQFLVYSGFGLIELQLIQTKRRVIPWRTYVILAFLTVGTMGLSNGSLGYLNYPTQVIFKC  140 (367)
T ss_pred             HHHHHhccccCcccchHHHHHHHHHHHhhhheEEEeecccceecchhHhhhhHhhhhhccccCcCccccccCcHHHHHHh
Confidence            578899999995 9999999999986555444222211223456899999999999999999999999999999999999


Q ss_pred             hhhHHHHHHHHHhcceecCcchhhhhhhhhhhheeeeeccc----cccHHHHHHHHHHHHHHHHHHHHHHhh
Q 043019          111 SMIPVSCFLEVVLDKVRYSRDTKLSILLVLFGVGVCTVTDV----SVNAKGFIAAFVAVWSTAMQQYHVILN  178 (204)
Q Consensus       111 ~~pv~~~l~~~~~~~~~~s~~~~~sl~~i~~Gv~~~~~~d~----~~~~~G~~~~l~s~~~~a~~~i~~~~~  178 (204)
                      +..+-+++.+.++.++|+.+..+.+...+++|.++.+..|.    +||..|+++...+.+++|.-.=..+|.
T Consensus       141 cKliPVmiggifIqGkRY~v~d~~aA~lm~lGli~FTLADs~~sPNF~~~Gv~mIsgALl~DA~iGNvQEk~  212 (367)
T KOG1582|consen  141 CKLIPVMIGGIFIQGKRYGVHDYIAAMLMSLGLIWFTLADSQTSPNFNLIGVMMISGALLADAVIGNVQEKA  212 (367)
T ss_pred             hhhhhhhheeeeeccccccHHHHHHHHHHHHHHHhhhhcccccCCCcceeeHHHHHHHHHHHHHhhHHHHHH
Confidence            99999999999999999999999999999999999999986    588999999999999999766666663

>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function

Probab=99.30  E-value=9.2e-11  Score=102.43  Aligned_cols=179  Identities=16%  Similarity=0.121  Sum_probs=132.7

Q ss_pred             HHHHHHHHHHHHHhhhcCCCchhhHHHHHHHHHHHHHHHHHHhCCcc-----CCCCCchhHHHHHHHHHHHHHHhhhhhc
Q 043019           24 VTSVGIIMVNKALMATYGFSFATTLTGLHFATTTMLTTFLRWLGYIQ-----TSHLPFSELVRFVVFANFSIVGMNVSLM   98 (204)
Q Consensus        24 ~~S~~~~~~NK~il~~~~f~~P~~Lt~~q~~~~~~~~~i~~~~~~~~-----~~~~~~~~~~plsl~~~~~i~~~n~sl~   98 (204)
                      ++..+....+..+-+. |++.|.+-+++.++.-.+.-......++.+     ..+.++++.+.+|++-...-.+.+.|++
T Consensus        23 l~~~~t~~~s~~l~~~-~~~~P~~Qs~~~Y~~l~~vy~~~~~~r~~~~~~~~~~~~~~w~y~lla~~Dv~aN~~~v~a~~  101 (334)
T PF06027_consen   23 LCITGTGTFSSLLANK-GVNIPTFQSFFNYVLLALVYTPILLYRRGFKKWLKVLKRPWWKYFLLALLDVEANYLVVLAYQ  101 (334)
T ss_pred             HHHHhHHHHHHHHHhc-CccCcHHHHHHHHHHHHHHHhhhhhhccccccchhhcchhHHHHHHHHHHHHHHHHHHHHHhh
Confidence            3334444456665555 899999988887776554433322222111     1234577888899998888999999999


Q ss_pred             cchHHHHHHHhhhhhHHHHHHHHHhcceecCcchhhhhhhhhhhheeeeeccccc---------cHHHHHHHHHHHHHHH
Q 043019           99 WNSVGFYQIAKLSMIPVSCFLEVVLDKVRYSRDTKLSILLVLFGVGVCTVTDVSV---------NAKGFIAAFVAVWSTA  169 (204)
Q Consensus        99 ~~svs~~qi~K~~~pv~~~l~~~~~~~~~~s~~~~~sl~~i~~Gv~~~~~~d~~~---------~~~G~~~~l~s~~~~a  169 (204)
                      |.+++-.|+++..+.|++++++++++|+|+++.++.++++.++|+++....|...         ...|=++++.+..++|
T Consensus       102 yTsvtS~~lL~~~~i~~~~~LS~~fL~~ry~~~~~~gv~i~i~Gv~lv~~sD~~~~~~~~~~~~~i~GDll~l~~a~lya  181 (334)
T PF06027_consen  102 YTSVTSVQLLDCTSIPFVMILSFIFLKRRYSWFHILGVLICIAGVVLVVVSDVLSGSDSSSGSNPILGDLLALLGAILYA  181 (334)
T ss_pred             cccHhHHHhhhhhhhHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhheeeecccccccCCCCCccchhHHHHHHHHHHHH
Confidence            9999999999999999999999999999999999999999999999988887432         3789999999999999


Q ss_pred             HHHHHHHhhhcc-ccccccch--hhhhhhhhceeeee
Q 043019          170 MQQYHVILNISV-SITHLFLC--LNHHIVCIPVVVVV  203 (204)
Q Consensus       170 ~~~i~~~~~~~~-~~~~~~~~--~~~~~~slp~~~~~  203 (204)
                      +++++.|+..+. +.++..++  ..+.+.+.|.+.+.
T Consensus       182 ~~nV~~E~~v~~~~~~~~lg~~Glfg~ii~~iq~~il  218 (334)
T PF06027_consen  182 VSNVLEEKLVKKAPRVEFLGMLGLFGFIISGIQLAIL  218 (334)
T ss_pred             HHHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHHhe
Confidence            999999983222 22222222  34556666655443

Some of the sequences in this family are annotated as putative membrane proteins.

>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=99.28  E-value=6e-12  Score=103.77  Aligned_cols=137  Identities=13%  Similarity=0.121  Sum_probs=119.1

Q ss_pred             CCCchhhHHHHHHHHHHHHHHHHHHhCC-ccCCCCCchhHHHHHHHHHHHHHHhhhhhccchHHHHHHHhhhhhHHHHHH
Q 043019           41 GFSFATTLTGLHFATTTMLTTFLRWLGY-IQTSHLPFSELVRFVVFANFSIVGMNVSLMWNSVGFYQIAKLSMIPVSCFL  119 (204)
Q Consensus        41 ~f~~P~~Lt~~q~~~~~~~~~i~~~~~~-~~~~~~~~~~~~plsl~~~~~i~~~n~sl~~~svs~~qi~K~~~pv~~~l~  119 (204)
                      .|.|...|.++|+.+..++..+....+. .+.++.+-+-....++.+.+.+..+|.+++|+|.|...+-|++.|+.++++
T Consensus        49 ~FTfalaLVf~qC~~N~vfAkvl~~ir~~~~~D~t~~~~YaAcs~sYLlAMVssN~Alq~vpYPTqVlgKScKPIPVMil  128 (337)
T KOG1580|consen   49 KFTFALALVFFQCTANTVFAKVLFLIRKKTEIDNTPTKMYAACSASYLLAMVSSNQALQYVPYPTQVLGKSCKPIPVMIL  128 (337)
T ss_pred             eehHHHHHHHHHHHHHHHHHHhheeecccccccCCcchHHHHHHHHHHHHHHhccchhcccCCcHHHhcccCCCcceeee
Confidence            3889999999999999999988655433 344555667888999999999999999999999999999999999999999


Q ss_pred             HHHhcceecCcchhhhhhhhhhhheeeeecccc-------ccHHHHHHHHHHHHHHHHHHHHHHh
Q 043019          120 EVVLDKVRYSRDTKLSILLVLFGVGVCTVTDVS-------VNAKGFIAAFVAVWSTAMQQYHVIL  177 (204)
Q Consensus       120 ~~~~~~~~~s~~~~~sl~~i~~Gv~~~~~~d~~-------~~~~G~~~~l~s~~~~a~~~i~~~~  177 (204)
                      +.++.+|+++|+++++++.|+.||++.-+.|.+       ..-.|-.+.++|...+++......+
T Consensus       129 GVl~~~KsY~w~kY~cVL~IV~GValFmYK~~Kv~g~e~~t~g~GElLL~lSL~mDGlTg~~Qdr  193 (337)
T KOG1580|consen  129 GVLFAHKSYHWRKYCCVLMIVVGVALFMYKENKVGGAEDKTFGFGELLLILSLAMDGLTGSIQDR  193 (337)
T ss_pred             ehhhhcccccHHHHHHHHHHHHHHHHhhccccccCCCcccccchHHHHHHHHHHhcccchhHHHH
Confidence            999999999999999999999999999988654       3357888999999988877666666

>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=99.23  E-value=6.6e-10  Score=94.51  Aligned_cols=148  Identities=11%  Similarity=0.002  Sum_probs=126.8

Q ss_pred             cCCCchhhHHHHHHHHHHHHHHHHHHhCCcc-CCCCCchhHHHHHHHHHHHHHHhhhhhccchHHHHHHHhhhhhHHHHH
Q 043019           40 YGFSFATTLTGLHFATTTMLTTFLRWLGYIQ-TSHLPFSELVRFVVFANFSIVGMNVSLMWNSVGFYQIAKLSMIPVSCF  118 (204)
Q Consensus        40 ~~f~~P~~Lt~~q~~~~~~~~~i~~~~~~~~-~~~~~~~~~~plsl~~~~~i~~~n~sl~~~svs~~qi~K~~~pv~~~l  118 (204)
                      .+|..|.++..+|-+.+.+..++.-.....+ ..+-++++..-+|+....+-.++-.||+|+|.|.+.+.|++.-+.+++
T Consensus        46 ~rF~~~~fL~~~q~l~~~~~s~~~l~~~k~~~~~~apl~~y~~is~tn~~s~~~~yeaLKyvSyPtq~LaKscKmIPVml  125 (327)
T KOG1581|consen   46 ERFEHSLFLVFCQRLVALLVSYAMLKWWKKELSGVAPLYKYSLISFTNTLSSWCGYEALKYVSYPTQTLAKSCKMIPVML  125 (327)
T ss_pred             ccccccHHHHHHHHHHHHHHHHHHHhcccccCCCCCchhHHhHHHHHhhcchHHHHHHHHhccchHHHHHHHhhhhHHHH
Confidence            4688899999999999998887754433322 334468999999999999999999999999999999999999999999


Q ss_pred             HHHHhcceecCcchhhhhhhhhhhheeeeeccc---------cccHHHHHHHHHHHHHHHHHHHHHHhhhccccccccch
Q 043019          119 LEVVLDKVRYSRDTKLSILLVLFGVGVCTVTDV---------SVNAKGFIAAFVAVWSTAMQQYHVILNISVSITHLFLC  189 (204)
Q Consensus       119 ~~~~~~~~~~s~~~~~sl~~i~~Gv~~~~~~d~---------~~~~~G~~~~l~s~~~~a~~~i~~~~~~~~~~~~~~~~  189 (204)
                      .+.+++++|++..++++..++.+|+.+....+.         +.+++|+.++..+..++++.+-+.++  .-++|++++.
T Consensus       126 mg~Lvy~~ky~~~eYl~~~LIs~GvsiF~l~~~s~s~~~~g~~ns~~G~~Ll~~~L~fDgfTn~tQd~--lf~~~k~s~~  203 (327)
T KOG1581|consen  126 MGTLVYGRKYSSFEYLVAFLISLGVSIFSLFPNSDSSSKSGRENSPIGILLLFGYLLFDGFTNATQDS--LFKKYKVSSL  203 (327)
T ss_pred             HHHHHhcCccCcHHHHHHHHHHhheeeEEEecCCCCccccCCCCchHhHHHHHHHHHHHhhHHhHHHH--HhccCCccHh
Confidence            999999999999999999999999999887642         25689999999999999999999888  3346666544

>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter

Probab=99.19  E-value=6.4e-10  Score=92.79  Aligned_cols=142  Identities=14%  Similarity=-0.004  Sum_probs=116.3

Q ss_pred             HHHHHHhhhcCCCchhhHHHHHHHHHHHHHHHHHHhCCccCCCCCchhHHHHHH-HHHHHHHHhhhhhccchHHHHHHHh
Q 043019           31 MVNKALMATYGFSFATTLTGLHFATTTMLTTFLRWLGYIQTSHLPFSELVRFVV-FANFSIVGMNVSLMWNSVGFYQIAK  109 (204)
Q Consensus        31 ~~NK~il~~~~f~~P~~Lt~~q~~~~~~~~~i~~~~~~~~~~~~~~~~~~plsl-~~~~~i~~~n~sl~~~svs~~qi~K  109 (204)
                      ...|+.+++ +.| |..+...+++.+.+.+....+.+   +++-+++..+..+. .......+-..|+++.|.+...++.
T Consensus         6 ~~~k~~~~~-~~~-~~~~~~~r~~~~~l~l~~~~~~~---~~~~~~~~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~ii~   80 (260)
T TIGR00950         6 VVIGQYLEG-QVP-LYFAVFRRLIFALLLLLPLLRRR---PPLKRLLRLLLLGALQIGVFYVLYFVAVKRLPVGEAALLL   80 (260)
T ss_pred             HHHHHHHhc-CCC-HHHHHHHHHHHHHHHHHHHHHhc---cCHhHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhHHHH
Confidence            367888775 345 88889999998888776654443   22224455555554 5677778889999999999999999


Q ss_pred             hhhhHHHHHHHHHhcceecCcchhhhhhhhhhhheeeeec-cccccHHHHHHHHHHHHHHHHHHHHHHh
Q 043019          110 LSMIPVSCFLEVVLDKVRYSRDTKLSILLVLFGVGVCTVT-DVSVNAKGFIAAFVAVWSTAMQQYHVIL  177 (204)
Q Consensus       110 ~~~pv~~~l~~~~~~~~~~s~~~~~sl~~i~~Gv~~~~~~-d~~~~~~G~~~~l~s~~~~a~~~i~~~~  177 (204)
                      .+.|+++++++.+++|||++++++.++.+..+|+.+...+ +.+.+..|..+++.+.++.+.+.+..||
T Consensus        81 ~~~P~~~~~~~~l~~~e~~~~~~~~gi~i~~~Gv~li~~~~~~~~~~~G~~~~l~a~~~~a~~~~~~k~  149 (260)
T TIGR00950        81 YLAPLYVTLLSDLMGKERPRKLVLLAAVLGLAGAVLLLSDGNLSINPAGLLLGLGSGISFALGTVLYKR  149 (260)
T ss_pred             hhhHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHhhccCCcccccHHHHHHHHHHHHHHHHHHHHHhH
Confidence            9999999999999999999999999999999998886544 3456788999999999999999999998

>PRK11689 aromatic amino acid exporter; Provisional

Probab=99.12  E-value=4.5e-09  Score=90.15  Aligned_cols=142  Identities=11%  Similarity=0.052  Sum_probs=108.9

Q ss_pred             HHHHHHhhhcCCCchhhHHHHHHHHHHHHHHHHHHhCCccCCCCCchhHHHHHHHHHHHHHHhhhhhcc----chHHHHH
Q 043019           31 MVNKALMATYGFSFATTLTGLHFATTTMLTTFLRWLGYIQTSHLPFSELVRFVVFANFSIVGMNVSLMW----NSVGFYQ  106 (204)
Q Consensus        31 ~~NK~il~~~~f~~P~~Lt~~q~~~~~~~~~i~~~~~~~~~~~~~~~~~~plsl~~~~~i~~~n~sl~~----~svs~~q  106 (204)
                      ...|...++  +| |..+.++++..+.+......+.  .+.++.+++..+.-++.+.+...+.+.++++    .+.....
T Consensus        21 ~~~k~~~~~--~~-P~~~~~~R~~~a~l~l~~~~~~--~~~~~~~~~~~~~~~l~~~~~~~~~~~a~~~~~~~~~a~~a~   95 (295)
T PRK11689         21 GLIRGVSES--LG-PVGGAAMIYSVSGLLLLLTVGF--PRLRQFPKRYLLAGGLLFVSYEICLALSLGYANTRRQAIEVG   95 (295)
T ss_pred             HHHHHHHcc--CC-hHHHHHHHHHHHHHHHHHHccc--cccccccHHHHHHHhHHHHHHHHHHHHHHHHhhccccchHHH
Confidence            467887765  77 9999999999988877665321  1122223344444445555666666666654    4666678


Q ss_pred             HHhhhhhHHHHHHHHHhcceecCcchhhhhhhhhhhheeeeecccc-----------ccHHHHHHHHHHHHHHHHHHHHH
Q 043019          107 IAKLSMIPVSCFLEVVLDKVRYSRDTKLSILLVLFGVGVCTVTDVS-----------VNAKGFIAAFVAVWSTAMQQYHV  175 (204)
Q Consensus       107 i~K~~~pv~~~l~~~~~~~~~~s~~~~~sl~~i~~Gv~~~~~~d~~-----------~~~~G~~~~l~s~~~~a~~~i~~  175 (204)
                      ++-.+.|+++++++.+++|||++++++.++++-.+|+.+...+|..           .+..|..+++.+.++.|.|.++.
T Consensus        96 ~l~~~~Pi~~~ll~~~~~~e~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~G~~~~l~aa~~~A~~~v~~  175 (295)
T PRK11689         96 MVNYLWPSLTILFAVLFNGQKANWLLIPGLLLALAGVAWVLGGDNGLSLAELINNIASNPLSYGLAFIGAFIWAAYCNVT  175 (295)
T ss_pred             HHHHHhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhHhheecCCccchhhhhhhccccChHHHHHHHHHHHHHHHHHHHH
Confidence            8899999999999999999999999999999999999887655431           23569999999999999999999


Q ss_pred             Hh
Q 043019          176 IL  177 (204)
Q Consensus       176 ~~  177 (204)
                      ||
T Consensus       176 k~  177 (295)
T PRK11689        176 RK  177 (295)
T ss_pred             hh
Confidence            99

>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional

Probab=99.07  E-value=8.1e-09  Score=88.37  Aligned_cols=143  Identities=13%  Similarity=0.063  Sum_probs=111.2

Q ss_pred             HHHHHHhhhcCCCchhhHHHHHHHHHHHHHHHHHHhCCcc-CCCCCchhHHHHHHHH-HHHHHHhhhhh-ccchHHHHHH
Q 043019           31 MVNKALMATYGFSFATTLTGLHFATTTMLTTFLRWLGYIQ-TSHLPFSELVRFVVFA-NFSIVGMNVSL-MWNSVGFYQI  107 (204)
Q Consensus        31 ~~NK~il~~~~f~~P~~Lt~~q~~~~~~~~~i~~~~~~~~-~~~~~~~~~~plsl~~-~~~i~~~n~sl-~~~svs~~qi  107 (204)
                      ..-|...++  .+ |..++.+++.++.+...+....++.+ +++-++++....+.+. .....+-+.+. ++.|.+...+
T Consensus        25 ~~~K~~~~~--~~-p~~~~~~R~~~a~l~ll~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~a~~a~~  101 (292)
T PRK11272         25 LVIRIGVES--WP-PLMMAGVRFLIAGILLLAFLLLRGHPLPTLRQWLNAALIGLLLLAVGNGMVTVAEHQNVPSGIAAV  101 (292)
T ss_pred             HHHHHHhcc--CC-HHHHHHHHHHHHHHHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcHHHHHH
Confidence            356766653  66 99999999999988876644333222 1111344555666543 34556667787 9999999999


Q ss_pred             HhhhhhHHHHHHHHHhcceecCcchhhhhhhhhhhheeeeec-cccccHHHHHHHHHHHHHHHHHHHHHHh
Q 043019          108 AKLSMIPVSCFLEVVLDKVRYSRDTKLSILLVLFGVGVCTVT-DVSVNAKGFIAAFVAVWSTAMQQYHVIL  177 (204)
Q Consensus       108 ~K~~~pv~~~l~~~~~~~~~~s~~~~~sl~~i~~Gv~~~~~~-d~~~~~~G~~~~l~s~~~~a~~~i~~~~  177 (204)
                      +-.+.|+++++++.+ +|||++++++.++++..+|+.+...+ +.+.+..|..+++.+.++.|.|.++.||
T Consensus       102 l~~~~Pl~~~lla~~-~~e~~~~~~~~~~~la~~Gv~ll~~~~~~~~~~~G~l~~l~a~~~~a~~~~~~~~  171 (292)
T PRK11272        102 VVATVPLFTLCFSRL-FGIRTRKLEWLGIAIGLAGIVLLNSGGNLSGNPWGAILILIASASWAFGSVWSSR  171 (292)
T ss_pred             HHHHHHHHHHHHHHH-hcccCchhHHHHHHHHHHhHHHHhcCcccccchHHHHHHHHHHHHHHHHHHHHHh
Confidence            999999999999986 69999999999999999999887543 4456778999999999999999999988

>PRK11453 O-acetylserine/cysteine export protein; Provisional

Probab=98.96  E-value=3.2e-08  Score=84.94  Aligned_cols=138  Identities=17%  Similarity=0.177  Sum_probs=106.3

Q ss_pred             HHHHHhhhcCCCchhhHHHHHHHHHHHHHHHHHHhCCccCCCCCchhHHHHHHHHH-HHHHHhhhhhcc-chHHHHHHHh
Q 043019           32 VNKALMATYGFSFATTLTGLHFATTTMLTTFLRWLGYIQTSHLPFSELVRFVVFAN-FSIVGMNVSLMW-NSVGFYQIAK  109 (204)
Q Consensus        32 ~NK~il~~~~f~~P~~Lt~~q~~~~~~~~~i~~~~~~~~~~~~~~~~~~plsl~~~-~~i~~~n~sl~~-~svs~~qi~K  109 (204)
                      .-|..+++  ++ |..+.++++.++.+......+     .++.+++..+..++... ....+...++++ .|.+...++-
T Consensus        22 ~~k~~~~~--~~-p~~~~~~R~~~a~~~l~~~~~-----~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~a~~a~~l~   93 (299)
T PRK11453         22 VIKVGLHN--MP-PLMLAGLRFMLVAFPAIFFVA-----RPKVPLNLLLGYGLTISFGQFAFLFCAINFGMPAGLASLVL   93 (299)
T ss_pred             HHHHHHhc--CC-HHHHHHHHHHHHHHHHHHHhc-----CCCCchHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHH
Confidence            44777754  77 999999999987655443321     12234455555555432 333455667777 6889999999


Q ss_pred             hhhhHHHHHHHHHhcceecCcchhhhhhhhhhhheeeeecc---ccccHHHHHHHHHHHHHHHHHHHHHHh
Q 043019          110 LSMIPVSCFLEVVLDKVRYSRDTKLSILLVLFGVGVCTVTD---VSVNAKGFIAAFVAVWSTAMQQYHVIL  177 (204)
Q Consensus       110 ~~~pv~~~l~~~~~~~~~~s~~~~~sl~~i~~Gv~~~~~~d---~~~~~~G~~~~l~s~~~~a~~~i~~~~  177 (204)
                      .+.|+++.+++++++|||++++++.++++..+|+.+...++   .+.+..|..+++.+.++.|.|.++.||
T Consensus        94 ~~~pi~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~ll~~~~~~~~~~~~~G~~l~l~aal~~a~~~v~~~~  164 (299)
T PRK11453         94 QAQAFFTIVLGAFTFGERLQGKQLAGIALAIFGVLVLIEDSLNGQHVAMLGFMLTLAAAFSWACGNIFNKK  164 (299)
T ss_pred             HhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHhHHHhccccCCCcchhHHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999988776442   334568999999999999999999998

>PLN00411 nodulin MtN21 family protein; Provisional

Probab=98.96  E-value=4.1e-08  Score=86.78  Aligned_cols=152  Identities=12%  Similarity=0.082  Sum_probs=116.6

Q ss_pred             HHHHHHHHHHHHHhhhcCCCchhhHHHHHHHHHHHHHHHHHH-hCC-ccCCCCCchh---HHHHHHHHHHHHHHhhhhhc
Q 043019           24 VTSVGIIMVNKALMATYGFSFATTLTGLHFATTTMLTTFLRW-LGY-IQTSHLPFSE---LVRFVVFANFSIVGMNVSLM   98 (204)
Q Consensus        24 ~~S~~~~~~NK~il~~~~f~~P~~Lt~~q~~~~~~~~~i~~~-~~~-~~~~~~~~~~---~~plsl~~~~~i~~~n~sl~   98 (204)
                      ....++..+-|..++ .|.+ |..+.++++.++.+.+..... .++ .+.++.++++   ...++++......+.+.+++
T Consensus        23 ~~~~~~~~~~k~a~~-~G~~-~~~~~~~R~~iA~l~Ll~~~~~~~~~~~~~~~~~~~~~~l~l~g~~g~~~~~~~~~gl~  100 (358)
T PLN00411         23 TSVVGISTLFKVATS-KGLN-IYPFLGYSYLLASLLLLPSLFFTNRSRSLPPLSVSILSKIGLLGFLGSMYVITGYIGIE  100 (358)
T ss_pred             HHHHHHHHHHHHHHH-CCCC-ccHHHHHHHHHHHHHHHHHHHHHHHhcccCcchHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            566677788899886 5787 888999999998887765432 221 2223334444   44444444344457899999


Q ss_pred             cchHHHHHHHhhhhhHHHHHHHHHh------cceecCcchhhhhhhhhhhheeeeec-cc--------------------
Q 043019           99 WNSVGFYQIAKLSMIPVSCFLEVVL------DKVRYSRDTKLSILLVLFGVGVCTVT-DV--------------------  151 (204)
Q Consensus        99 ~~svs~~qi~K~~~pv~~~l~~~~~------~~~~~s~~~~~sl~~i~~Gv~~~~~~-d~--------------------  151 (204)
                      |.|.+...++-++.|+++++++.++      ++||.+++++.++++-.+|+.+.... +.                    
T Consensus       101 ~tsa~~asll~~~~P~~~~lla~~~~~e~~~~~er~~~~~~~G~~l~~~Gv~ll~~~~g~~~~~~~~~~~~~~~~~~~~~  180 (358)
T PLN00411        101 YSNPTLASAISNITPALTFILAIIFRMEKVSFKERSSVAKVMGTILSLIGALVVIFYHGPRVFVASSPPYLNFRQLSPPL  180 (358)
T ss_pred             hccHHHHHHHHHhhHHHHHHHHHHHHhchhhhcccccHHHHHHHHHHHHHHHHHHHccCccccccccccccccccccccc
Confidence            9999999999999999999999999      69999999999999999998874431 11                    


Q ss_pred             ---ccc-HHHHHHHHHHHHHHHHHHHHHHh
Q 043019          152 ---SVN-AKGFIAAFVAVWSTAMQQYHVIL  177 (204)
Q Consensus       152 ---~~~-~~G~~~~l~s~~~~a~~~i~~~~  177 (204)
                         +-+ ..|..+++.+.++.|+|.+..++
T Consensus       181 ~~~~~~~~lG~~l~l~aa~~wa~~~il~~~  210 (358)
T PLN00411        181 SSSNSDWLIGGALLTIQGIFVSVSFILQAH  210 (358)
T ss_pred             CCCcccHHHHHHHHHHHHHHHHHHHHHHHH
Confidence               112 45999999999999999999988

>TIGR00688 rarD rarD protein

Probab=98.95  E-value=2.4e-08  Score=83.63  Aligned_cols=138  Identities=16%  Similarity=0.027  Sum_probs=103.8

Q ss_pred             HHHHHhhhcCCCchhhHHHHHHHHHHHHHHHHH-HhCCcc-----CCCCCchh----HHHHHHHHHHHHHHhhhhhccch
Q 043019           32 VNKALMATYGFSFATTLTGLHFATTTMLTTFLR-WLGYIQ-----TSHLPFSE----LVRFVVFANFSIVGMNVSLMWNS  101 (204)
Q Consensus        32 ~NK~il~~~~f~~P~~Lt~~q~~~~~~~~~i~~-~~~~~~-----~~~~~~~~----~~plsl~~~~~i~~~n~sl~~~s  101 (204)
                      .-|. ..  +.+ |..+++++++++.+.+.+.. ..+..+     .++.++++    ....+++......+-..++++.|
T Consensus        20 ~~k~-~~--~~~-~~~i~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~a~~~~~   95 (256)
T TIGR00688        20 YSKL-LK--PLP-ATDILGHRMIWSFPFMLLSVTLFRQWAALIERLKRIQKRPLILSLLLCGLLIGFNWWLFIWAVNNGS   95 (256)
T ss_pred             HHHH-hc--cCC-HHHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHhCcccchHHHHHHHHHHHHHHHHHHHHHHHHcch
Confidence            4666 33  367 99999999999887765432 222111     11112222    33455667778889999999999


Q ss_pred             HHHHHHHhhhhhHHHHHHHHHhcceecCcchhhhhhhhhhhheeeeeccccccHHHHHHHHHHHHHHHHHHHHHHh
Q 043019          102 VGFYQIAKLSMIPVSCFLEVVLDKVRYSRDTKLSILLVLFGVGVCTVTDVSVNAKGFIAAFVAVWSTAMQQYHVIL  177 (204)
Q Consensus       102 vs~~qi~K~~~pv~~~l~~~~~~~~~~s~~~~~sl~~i~~Gv~~~~~~d~~~~~~G~~~~l~s~~~~a~~~i~~~~  177 (204)
                      ++..+++-.+.|+++++++.+++|||.+++++.++++..+|+.+...++.+.+    .+++.+.++.|.|.+..|+
T Consensus        96 ~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~~~l~~~~~~~Gv~li~~~~~~~~----~~~l~aa~~~a~~~i~~~~  167 (256)
T TIGR00688        96 SLEVSLGYLINPLVMVALGRVFLKERISRFQFIAVIIATLGVISNIVLKGSLP----WEALVLAFSFTAYGLIRKA  167 (256)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHcCCch----HHHHHHHHHHHHHHHHHhh
Confidence            99999999999999999999999999999999999999999987543322222    3567889999999999888

This uncharacterized protein is predicted to have many membrane-spanning domains.

>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles

Probab=98.89  E-value=1.8e-08  Score=84.65  Aligned_cols=107  Identities=19%  Similarity=0.176  Sum_probs=92.2

Q ss_pred             hhHHHHHHHHHHHHHHhhhhhccchHHHHHHHhhhhhHHHHHHHHHhcceecCcchhhhhhhhhhhheeeeeccccc---
Q 043019           77 SELVRFVVFANFSIVGMNVSLMWNSVGFYQIAKLSMIPVSCFLEVVLDKVRYSRDTKLSILLVLFGVGVCTVTDVSV---  153 (204)
Q Consensus        77 ~~~~plsl~~~~~i~~~n~sl~~~svs~~qi~K~~~pv~~~l~~~~~~~~~~s~~~~~sl~~i~~Gv~~~~~~d~~~---  153 (204)
                      .+...-|++++..-.+...++++.+.+.||+++.+.+++|+++.++++|||.++++|.++.+++.|+.+...++...   
T Consensus        18 ~~~~vPA~lY~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~qW~aL~lL~~Gv~lv~~~~~~~~~~   97 (244)
T PF04142_consen   18 LKLAVPALLYAIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSRRQWLALFLLVAGVVLVQLSSSQSSDN   97 (244)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHheeecCCcccccc
Confidence            34445566788888888899999999999999999999999999999999999999999999999999977653221   


Q ss_pred             --------------cHHHHHHHHHHHHHHHHHHHHHHhhhcccc
Q 043019          154 --------------NAKGFIAAFVAVWSTAMQQYHVILNISVSI  183 (204)
Q Consensus       154 --------------~~~G~~~~l~s~~~~a~~~i~~~~~~~~~~  183 (204)
                                    ...|+...+.+++++|+..++.+|.++.++
T Consensus        98 ~~~~~~~~~~~~~~~~~G~~~vl~~~~~S~~agVy~E~~lK~~~  141 (244)
T PF04142_consen   98 SSSSSVHHDASNQNPLLGLLAVLAAAFLSGFAGVYFEKLLKRSN  141 (244)
T ss_pred             ccccccccccccchhHhHHHHHHHHHHHHHHHHHHHHHHhcccc
Confidence                          258999999999999999999999655544

P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane

>PRK15430 putative chloramphenical resistance permease RarD; Provisional

Probab=98.87  E-value=7.3e-08  Score=82.70  Aligned_cols=145  Identities=13%  Similarity=0.010  Sum_probs=105.7

Q ss_pred             HHHHHHHHHHHHHhhhcCCCchhhHHHHHHHHHHHHHHHHHHh-CCccC-C-CC-CchhHH--HH-HHHHHHHHHHhhhh
Q 043019           24 VTSVGIIMVNKALMATYGFSFATTLTGLHFATTTMLTTFLRWL-GYIQT-S-HL-PFSELV--RF-VVFANFSIVGMNVS   96 (204)
Q Consensus        24 ~~S~~~~~~NK~il~~~~f~~P~~Lt~~q~~~~~~~~~i~~~~-~~~~~-~-~~-~~~~~~--pl-sl~~~~~i~~~n~s   96 (204)
                      ..+..-.+. |.. .  +.+ |..+..+|++++.+.+...... +..+. + +. +++++.  .. ++.......+-+.+
T Consensus        19 ~wg~~~~~~-k~~-~--~~~-~~~~~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a   93 (296)
T PRK15430         19 IWGIAPAYF-KLI-Y--YVP-ADEILTHRVIWSFFFMVVLMSICRQWSYLKTLIQTPQKIFMLAVSAVLIGGNWLLFIWA   93 (296)
T ss_pred             HHHHHHHHH-HHh-c--CCC-HHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            333333344 764 2  367 9999999999988765543222 21111 0 01 233322  23 34566778899999


Q ss_pred             hccchHHHHHHHhhhhhHHHHHHHHHhcceecCcchhhhhhhhhhhheeeeeccccccHHHHHHHHHHHHHHHHHHHHHH
Q 043019           97 LMWNSVGFYQIAKLSMIPVSCFLEVVLDKVRYSRDTKLSILLVLFGVGVCTVTDVSVNAKGFIAAFVAVWSTAMQQYHVI  176 (204)
Q Consensus        97 l~~~svs~~qi~K~~~pv~~~l~~~~~~~~~~s~~~~~sl~~i~~Gv~~~~~~d~~~~~~G~~~~l~s~~~~a~~~i~~~  176 (204)
                      +++.|++...++-.+.|+++++++++++|||.+++++.++++...|+.+....+.+..    .+++.+.++.|.|.+..|
T Consensus        94 ~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E~~~~~~~~g~~l~~~Gv~li~~~~~~~~----~~~l~aa~~~a~~~i~~r  169 (296)
T PRK15430         94 VNNHHMLEASLGYFINPLVNIVLGMIFLGERFRRMQWLAVILAICGVLVQLWTFGSLP----IIALGLAFSFAFYGLVRK  169 (296)
T ss_pred             HhcCchHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHcCCcc----HHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999999999999999999999999999999987653333222    357778899999999988


Q ss_pred             h
Q 043019          177 L  177 (204)
Q Consensus       177 ~  177 (204)
                      +
T Consensus       170 ~  170 (296)
T PRK15430        170 K  170 (296)
T ss_pred             h
Confidence            8

>PRK10532 threonine and homoserine efflux system; Provisional

Probab=98.77  E-value=5e-07  Score=77.39  Aligned_cols=139  Identities=14%  Similarity=-0.014  Sum_probs=103.6

Q ss_pred             HHHHHHhhhcCCCchhhHHHHHHHHHHHHHHHHHHhCCccCCCCCchhHHHHHHHHHHHHHHhhhhhccchHHHHHHHhh
Q 043019           31 MVNKALMATYGFSFATTLTGLHFATTTMLTTFLRWLGYIQTSHLPFSELVRFVVFANFSIVGMNVSLMWNSVGFYQIAKL  110 (204)
Q Consensus        31 ~~NK~il~~~~f~~P~~Lt~~q~~~~~~~~~i~~~~~~~~~~~~~~~~~~plsl~~~~~i~~~n~sl~~~svs~~qi~K~  110 (204)
                      ...|+.+++  +| |..+.++|++++.+.+.+..+.+..+.++-+++..+..+++......+...++++.|.+...++-.
T Consensus        29 ~~~K~~~~~--~~-~~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~al~~~~~~~a~~l~~  105 (293)
T PRK10532         29 SLAKSLFPL--VG-APGVTALRLALGTLILIAIFKPWRLRFAKEQRLPLLFYGVSLGGMNYLFYLSIQTVPLGIAVALEF  105 (293)
T ss_pred             HHHHHHHHH--cC-HHHHHHHHHHHHHHHHHHHHhHHhccCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHH
Confidence            368998875  67 899999999999888776543222122222345566777777777778889999999999999999


Q ss_pred             hhhHHHHHHHHHhcceecCcchhhhhhhhhhhheeeeec---cccccHHHHHHHHHHHHHHHHHHHHHHhh
Q 043019          111 SMIPVSCFLEVVLDKVRYSRDTKLSILLVLFGVGVCTVT---DVSVNAKGFIAAFVAVWSTAMQQYHVILN  178 (204)
Q Consensus       111 ~~pv~~~l~~~~~~~~~~s~~~~~sl~~i~~Gv~~~~~~---d~~~~~~G~~~~l~s~~~~a~~~i~~~~~  178 (204)
                      +.|+++++++.    ||++...+  +.+...|+.+....   +.+.+..|..+++.+.++.|.|.+..||.
T Consensus       106 t~Pi~~~ll~~----~~~~~~~~--~~i~~~Gv~li~~~~~~~~~~~~~G~ll~l~aa~~~a~~~v~~r~~  170 (293)
T PRK10532        106 TGPLAVALFSS----RRPVDFVW--VVLAVLGLWFLLPLGQDVSHVDLTGAALALGAGACWAIYILSGQRA  170 (293)
T ss_pred             HHHHHHHHHhc----CChHHHHH--HHHHHHHHheeeecCCCcccCChHHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999998873    55554444  44557787664422   23456789999999999999999999983

>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown

Probab=98.76  E-value=4.2e-08  Score=72.10  Aligned_cols=112  Identities=17%  Similarity=0.185  Sum_probs=89.2

Q ss_pred             HHHHHHhhhcCCCchhhHHHHHHHHHHHHHHHHHHh-CCccCCCCC---chhHHHHHHH-HHHHHHHhhhhhccchHHHH
Q 043019           31 MVNKALMATYGFSFATTLTGLHFATTTMLTTFLRWL-GYIQTSHLP---FSELVRFVVF-ANFSIVGMNVSLMWNSVGFY  105 (204)
Q Consensus        31 ~~NK~il~~~~f~~P~~Lt~~q~~~~~~~~~i~~~~-~~~~~~~~~---~~~~~plsl~-~~~~i~~~n~sl~~~svs~~  105 (204)
                      ..+|...++  ++ |...+.+++..+.+ ..+.... +..+.++.+   +......+++ ......+-+.++++.+++..
T Consensus         8 ~~~k~~~~~--~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~   83 (126)
T PF00892_consen    8 VFSKKLLKK--IS-PLSITFWRFLIAGI-LLILLLILGRKPFKNLSPRQWLWLLFLGLLGTALAYLLYFYALKYISASIV   83 (126)
T ss_pred             HHHHHHhcc--CC-HHHHHHHHHHHHHH-HHHHHHhhccccccCCChhhhhhhhHhhccceehHHHHHHHHHHhcchhHH
Confidence            578888876  66 89999999999986 4443222 211122222   4456666666 57889999999999999999


Q ss_pred             HHHhhhhhHHHHHHHHHhcceecCcchhhhhhhhhhhheee
Q 043019          106 QIAKLSMIPVSCFLEVVLDKVRYSRDTKLSILLVLFGVGVC  146 (204)
Q Consensus       106 qi~K~~~pv~~~l~~~~~~~~~~s~~~~~sl~~i~~Gv~~~  146 (204)
                      +++..+.|+++++++++++||+++++++.++.+++.|+.+.
T Consensus        84 ~~~~~~~pv~~~i~~~~~~~e~~~~~~~~g~~l~~~g~~l~  124 (126)
T PF00892_consen   84 SILQYLSPVFAAILGWLFLGERPSWRQIIGIILIIIGVVLI  124 (126)
T ss_pred             HHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999998764

Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane

>KOG2765 consensus Predicted membrane protein [Function unknown]

Probab=98.64  E-value=1.2e-07  Score=83.04  Aligned_cols=125  Identities=16%  Similarity=0.203  Sum_probs=100.9

Q ss_pred             hHHHHHHHHH----HHHHHhhhhhccchHHHHHHHhhhhhHHHHHHHHHhcceecCcchhhhhhhhhhhheeeeecccc-
Q 043019           78 ELVRFVVFAN----FSIVGMNVSLMWNSVGFYQIAKLSMIPVSCFLEVVLDKVRYSRDTKLSILLVLFGVGVCTVTDVS-  152 (204)
Q Consensus        78 ~~~plsl~~~----~~i~~~n~sl~~~svs~~qi~K~~~pv~~~l~~~~~~~~~~s~~~~~sl~~i~~Gv~~~~~~d~~-  152 (204)
                      +..-+++.++    ..-.+.|.||++.+|+-.+++-+++-.||..++.++.+||+++.+.+++.+-++|+.+.+.+|.+ 
T Consensus       157 ~~ak~sl~fc~lWF~anl~~naALa~TsVAS~TilSStSs~FtL~la~if~~e~ft~sKllav~~si~GViiVt~~~s~~  236 (416)
T KOG2765|consen  157 QTAKLSLFFCPLWFLANLTSNAALAFTSVASTTILSSTSSFFTLFLAAIFPVERFTLSKLLAVFVSIAGVIIVTMGDSKQ  236 (416)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHcCcchhhHHHHHHHHHhhccEEEEEeccccc
Confidence            5666666555    45567899999999999999999999999999999999999999999999999999999999652 


Q ss_pred             -------ccHHHHHHHHHHHHHHHHHHHHHHhhhccccccccc-----h--hhhhhhhhceeee
Q 043019          153 -------VNAKGFIAAFVAVWSTAMQQYHVILNISVSITHLFL-----C--LNHHIVCIPVVVV  202 (204)
Q Consensus       153 -------~~~~G~~~~l~s~~~~a~~~i~~~~~~~~~~~~~~~-----~--~~~~~~slp~~~~  202 (204)
                             -...|-++++++.+.+|.|.++.||+...+...++-     .  ..|.++--|.+++
T Consensus       237 ~~~~~a~~~llG~llaL~sA~~YavY~vllk~~~~~eg~rvdi~lffGfvGLfnllllwP~l~i  300 (416)
T KOG2765|consen  237 NSDLPASRPLLGNLLALLSALLYAVYTVLLKRKIGDEGERVDIQLFFGFVGLFNLLLLWPPLII  300 (416)
T ss_pred             cccCCccchhHHHHHHHHHHHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHHHhHHHHH
Confidence                   237899999999999999999999944333212221     1  2466666665544

>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein

Probab=98.61  E-value=9.5e-07  Score=75.14  Aligned_cols=97  Identities=16%  Similarity=0.087  Sum_probs=84.5

Q ss_pred             HHHHHHHHHHHHhhhhhccchHHHHHHHhhhhhHHHHHHHHHhcceecCcchhhhhhhhhhhheeeeecc-ccccHHHHH
Q 043019           81 RFVVFANFSIVGMNVSLMWNSVGFYQIAKLSMIPVSCFLEVVLDKVRYSRDTKLSILLVLFGVGVCTVTD-VSVNAKGFI  159 (204)
Q Consensus        81 plsl~~~~~i~~~n~sl~~~svs~~qi~K~~~pv~~~l~~~~~~~~~~s~~~~~sl~~i~~Gv~~~~~~d-~~~~~~G~~  159 (204)
                      .-++.......+-+.++++.|++....+-.+.|+++++++++++|||++++++.++.+...|+.+....| .+.+..|..
T Consensus        68 ~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~g~~~~~~Gv~ll~~~~~~~~~~~g~~  147 (281)
T TIGR03340        68 ISAVANMVYFLGLAQAYHHADVGLVYPLARSSPLLVAIWATLTLGETLSPLAWLGILIITLGLLVLGLSRFAQHRRKAYA  147 (281)
T ss_pred             HHHHHHHHHHHHHHHHHhcCChhhhhhHHhhhHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhcccccccchhHHH
Confidence            3444566778888999999999999999999999999999999999999999999999999998765443 235677888


Q ss_pred             HHHHHHHHHHHHHHHHHh
Q 043019          160 AAFVAVWSTAMQQYHVIL  177 (204)
Q Consensus       160 ~~l~s~~~~a~~~i~~~~  177 (204)
                      +++.+.++.+.|.+..|+
T Consensus       148 ~~l~aal~~a~~~i~~k~  165 (281)
T TIGR03340       148 WALAAALGTAIYSLSDKA  165 (281)
T ss_pred             HHHHHHHHHHHhhhhccc
Confidence            999999999999998876

This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.

>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]

Probab=98.60  E-value=7.2e-06  Score=68.47  Aligned_cols=134  Identities=19%  Similarity=0.102  Sum_probs=102.7

Q ss_pred             hhhHHHHHHHHHHHHHHHHHHhCCc--cCCCCCc-hhHHHHHHHHHHHHHHhhhhhccchHHHHHHHhhhhhHHHHHHHH
Q 043019           45 ATTLTGLHFATTTMLTTFLRWLGYI--QTSHLPF-SELVRFVVFANFSIVGMNVSLMWNSVGFYQIAKLSMIPVSCFLEV  121 (204)
Q Consensus        45 P~~Lt~~q~~~~~~~~~i~~~~~~~--~~~~~~~-~~~~plsl~~~~~i~~~n~sl~~~svs~~qi~K~~~pv~~~l~~~  121 (204)
                      +......+.....+........+..  ++.+.++ +..+.-.+.......+-..++++.+.+..+++.++.|+++.+++.
T Consensus        36 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~  115 (292)
T COG0697          36 FLFAAALRFLIAALLLLPLLLLEPRGLRPALRPWLLLLLLALLGLALPFLLLFLALKYTSASVASLIIGLLPLFTALLAV  115 (292)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHhhcccccccccchHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHH
Confidence            3444455877777663333333321  1111122 234444556777778888899999999999999999999999997


Q ss_pred             -HhcceecCcchhhhhhhhhhhheeeeecccccc---HHHHHHHHHHHHHHHHHHHHHHhh
Q 043019          122 -VLDKVRYSRDTKLSILLVLFGVGVCTVTDVSVN---AKGFIAAFVAVWSTAMQQYHVILN  178 (204)
Q Consensus       122 -~~~~~~~s~~~~~sl~~i~~Gv~~~~~~d~~~~---~~G~~~~l~s~~~~a~~~i~~~~~  178 (204)
                       ++++||.+++++.+......|+.+....+...+   ..|..+++.+.+..|++.+..++.
T Consensus       116 ~~~~~e~~~~~~~~~~~~~~~Gv~lv~~~~~~~~~~~~~g~~~~l~a~~~~a~~~~~~~~~  176 (292)
T COG0697         116 LLLLGERLSLLQILGILLALAGVLLILLGGGGGGILSLLGLLLALAAALLWALYTALVKRL  176 (292)
T ss_pred             HHHccCCCcHHHHHHHHHHHHhHHheecCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence             777999999999999999999999988776543   589999999999999999999973

>PF13536 EmrE: Multidrug resistance efflux transporter

Probab=98.48  E-value=7.4e-07  Score=65.92  Aligned_cols=76  Identities=18%  Similarity=0.149  Sum_probs=65.9

Q ss_pred             chhHHHHHHHHH-HHHHHhhhhhccchHHHHHHHhhhhhHHHHHHHHHhcceecCcchhhhhhhhhhhheeeeecccc
Q 043019           76 FSELVRFVVFAN-FSIVGMNVSLMWNSVGFYQIAKLSMIPVSCFLEVVLDKVRYSRDTKLSILLVLFGVGVCTVTDVS  152 (204)
Q Consensus        76 ~~~~~plsl~~~-~~i~~~n~sl~~~svs~~qi~K~~~pv~~~l~~~~~~~~~~s~~~~~sl~~i~~Gv~~~~~~d~~  152 (204)
                      +..+...+++.. ....+-..++++.+ +....+.++.|+++++++.+++|||.+++++.++.++.+|+.+..++|.+
T Consensus        34 ~~~~~~~g~~~~~~~~~~~~~a~~~~~-~~v~~i~~~~pi~~~ll~~~~~~er~~~~~~~a~~l~~~Gv~li~~~~~~  110 (113)
T PF13536_consen   34 WLWLILAGLLGFGVAYLLFFYALSYAP-ALVAAIFSLSPIFTALLSWLFFKERLSPRRWLAILLILIGVILIAWSDLT  110 (113)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhhhhcc
Confidence            344455566554 77888899999999 68889999999999999999999999999999999999999998888764

>KOG3912 consensus Predicted integral membrane protein [General function prediction only]

Probab=98.38  E-value=1e-05  Score=68.76  Aligned_cols=164  Identities=17%  Similarity=0.122  Sum_probs=120.5

Q ss_pred             HHHHHHHHHHHHHhh-----hcCCCchhhHHHHHHHHHHHHHHH---HHHh----CCcc-------CCCCCc--hhHHHH
Q 043019           24 VTSVGIIMVNKALMA-----TYGFSFATTLTGLHFATTTMLTTF---LRWL----GYIQ-------TSHLPF--SELVRF   82 (204)
Q Consensus        24 ~~S~~~~~~NK~il~-----~~~f~~P~~Lt~~q~~~~~~~~~i---~~~~----~~~~-------~~~~~~--~~~~pl   82 (204)
                      .+...-++.-||.=+     .-||+.|..-+..-|+=-..-+.+   .++.    |...       .++-|+  .-.+|-
T Consensus        13 vsGs~Ntl~aKwadsi~~eg~pgfqhpvlqal~mFlGEflCl~vf~lir~~sn~~g~~s~~~~ilsq~~~pf~p~lfl~P   92 (372)
T KOG3912|consen   13 VSGSFNTLVAKWADSIQAEGSPGFQHPVLQALLMFLGEFLCLAVFKLIRLRSNGQGVSSDLDSILSQDSSPFNPVLFLPP   92 (372)
T ss_pred             hhccHHHHHHHHHHhhhhhCCCccccHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccccccccccCCCCcceecCh
Confidence            344444566788755     255888877665544322111111   2221    1111       011133  446778


Q ss_pred             HHHHHHHHHHhhhhhccchHHHHHHHhhhhhHHHHHHHHHhcceecCcchhhhhhhhhhhheeeeeccccc---------
Q 043019           83 VVFANFSIVGMNVSLMWNSVGFYQIAKLSMIPVSCFLEVVLDKVRYSRDTKLSILLVLFGVGVCTVTDVSV---------  153 (204)
Q Consensus        83 sl~~~~~i~~~n~sl~~~svs~~qi~K~~~pv~~~l~~~~~~~~~~s~~~~~sl~~i~~Gv~~~~~~d~~~---------  153 (204)
                      +++=.....+.|.++.+.+.+-+|++|-...+||-+++.-+++++...++|+++..++.|+.+....|...         
T Consensus        93 al~Di~gsslm~vgL~lTsASsfQMlRGaviIFvglfst~~Ln~ti~~~qWl~i~fv~lGlviVg~~d~~~~~~p~~d~s  172 (372)
T KOG3912|consen   93 ALCDIAGSSLMYVGLNLTSASSFQMLRGAVIIFVGLFSTMFLNRTITGRQWLGILFVSLGLVIVGSLDVHLVTDPYTDYS  172 (372)
T ss_pred             HHHHHhhhHHHHHHHHHhhHHHHHHhhcchhhhhHHHHHHHHhcccchhhHHHHHHHHhhhheeeeeecccccCCccccc
Confidence            88888888999999999999999999999999999999999999999999999999999999988776432         


Q ss_pred             -cHHHHHHHHHHHHHHHHHHHHHHhhhccccccccch
Q 043019          154 -NAKGFIAAFVAVWSTAMQQYHVILNISVSITHLFLC  189 (204)
Q Consensus       154 -~~~G~~~~l~s~~~~a~~~i~~~~~~~~~~~~~~~~  189 (204)
                       -.+|-.+.+++-+.-|++.+.-+|  ..+++++.+.
T Consensus       173 ~iitGdllIiiaqiivaiQ~v~Eek--~l~~~nV~pl  207 (372)
T KOG3912|consen  173 SIITGDLLIIIAQIIVAIQMVCEEK--QLKKSNVAPL  207 (372)
T ss_pred             cchhhhHHHHHHHHHHHHHHHHHHh--hhhhccCCHH
Confidence             268999999999999999999998  5566666554

>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein

Probab=98.12  E-value=0.00011  Score=63.15  Aligned_cols=103  Identities=10%  Similarity=0.033  Sum_probs=84.0

Q ss_pred             CchhHHHHHHH----HHHHHHHhhhhhccchHHHHHHHhh-hhhHHHHHHHHHhcceecCcch----hhhhhhhhhhhee
Q 043019           75 PFSELVRFVVF----ANFSIVGMNVSLMWNSVGFYQIAKL-SMIPVSCFLEVVLDKVRYSRDT----KLSILLVLFGVGV  145 (204)
Q Consensus        75 ~~~~~~plsl~----~~~~i~~~n~sl~~~svs~~qi~K~-~~pv~~~l~~~~~~~~~~s~~~----~~sl~~i~~Gv~~  145 (204)
                      +.++.++.++.    .+..-.+-..+.++..++....+=. ..+++..+.+.+++||+.++++    ..++++++.|+.+
T Consensus        54 ~~~~~~~~g~l~G~~w~ig~~~~~~ai~~~gva~a~~i~~~~~~v~~~l~~~~~f~e~~t~~~~~~~~~g~~l~l~G~~l  133 (290)
T TIGR00776        54 WALSIFLVGLLSGAFWALGQINQFKSMRYMGVSKTMPISTGFQLVGGTLFGVIVFGEWSTSIQTLLGLLALILIIIGVYL  133 (290)
T ss_pred             cccHHHHHHHHHHHHHHhhhhhHHHHHHHHhHHHHhHHHHHHHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHhHhe
Confidence            44666666665    4444466667779999999877777 7777899999999999999999    9999999999999


Q ss_pred             eeecccc-------cc-HHHHHHHHHHHHHHHHHHHHHHh
Q 043019          146 CTVTDVS-------VN-AKGFIAAFVAVWSTAMQQYHVIL  177 (204)
Q Consensus       146 ~~~~d~~-------~~-~~G~~~~l~s~~~~a~~~i~~~~  177 (204)
                      .+..|.+       .| ..|.++++.+.+..+.|.+..|+
T Consensus       134 ~~~~~~~~~~~~~~~~~~~Gi~~~l~sg~~y~~~~~~~~~  173 (290)
T TIGR00776       134 TSRSKDKSAGIKSEFNFKKGILLLLMSTIGYLVYVVVAKA  173 (290)
T ss_pred             EEeccccccccccccchhhHHHHHHHHHHHHHHHHHHHHH
Confidence            7764322       34 78999999999999999999987

These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.

>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]

Probab=97.95  E-value=0.0003  Score=61.45  Aligned_cols=160  Identities=15%  Similarity=0.095  Sum_probs=109.8

Q ss_pred             HHHHHHHHHHHHHhhhcCCCc-hhhHHHHHHHHHHHHHHH--HHHhCC--cc-CCCCC------chhHHH---HHHHHHH
Q 043019           24 VTSVGIIMVNKALMATYGFSF-ATTLTGLHFATTTMLTTF--LRWLGY--IQ-TSHLP------FSELVR---FVVFANF   88 (204)
Q Consensus        24 ~~S~~~~~~NK~il~~~~f~~-P~~Lt~~q~~~~~~~~~i--~~~~~~--~~-~~~~~------~~~~~p---lsl~~~~   88 (204)
                      +-+.++.+.-|+--...+.+| |.+..++-=..-.+++..  .+..+.  -+ .+.++      +++.+-   -++.|+.
T Consensus        25 ~~~~~l~l~l~ys~~~~~~~f~~tt~v~~~Ei~Kl~~c~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~lk~~vPa~iYal  104 (345)
T KOG2234|consen   25 AQNTALTLLLRYSRTREKPMFLPTTAVFLTEVIKLVFCLFLLLFEERKYAKKSLKSLSKEILAAPRETLKVSVPALIYAL  104 (345)
T ss_pred             HHHhhHHHHHHHHhcCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhhHHhhhhhhhcCHHHHhChHHHHHHHHHHHHHHH
Confidence            555666667676655555555 655554443333333332  111111  11 11121      223333   3446666


Q ss_pred             HHHHhhhhhccchHHHHHHHhhhhhHHHHHHHHHhcceecCcchhhhhhhhhhhheeeeecc-----------ccccHHH
Q 043019           89 SIVGMNVSLMWNSVGFYQIAKLSMIPVSCFLEVVLDKVRYSRDTKLSILLVLFGVGVCTVTD-----------VSVNAKG  157 (204)
Q Consensus        89 ~i~~~n~sl~~~svs~~qi~K~~~pv~~~l~~~~~~~~~~s~~~~~sl~~i~~Gv~~~~~~d-----------~~~~~~G  157 (204)
                      .--+--.++.+.+-++||+.-...+..|+++.+++++||.++++|.++++...|+.+.-.+.           .+-.+.|
T Consensus       105 qNnl~yval~~ldaatyqVt~qlKI~tTA~f~vl~L~rkLs~~Qw~Al~lL~~Gv~~vQ~~~~~~~~a~~~~~~~n~~~G  184 (345)
T KOG2234|consen  105 QNNLQYVALSNLDAATYQVTYQLKILTTAIFSVLILRRKLSRLQWMALVLLFAGVALVQLPSLSPTGAKSESSAQNPFLG  184 (345)
T ss_pred             hhhHHHHHHhcCCchhhhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhccCCCCCCccCCCcccchhhh
Confidence            55566678889999999999999999999999999999999999999999999998876221           1224789


Q ss_pred             HHHHHHHHHHHHHHHHHHHhhhcccc
Q 043019          158 FIAAFVAVWSTAMQQYHVILNISVSI  183 (204)
Q Consensus       158 ~~~~l~s~~~~a~~~i~~~~~~~~~~  183 (204)
                      +...+.+++.+++-+++.+|.++.++
T Consensus       185 ~~avl~~c~~SgfAgvYfEkiLK~s~  210 (345)
T KOG2234|consen  185 LVAVLVACFLSGFAGVYFEKILKGSN  210 (345)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence            99999999999999999999654444

>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter

Probab=97.94  E-value=0.00028  Score=58.62  Aligned_cols=114  Identities=15%  Similarity=0.069  Sum_probs=82.6

Q ss_pred             HHHHHHHHHhhhcCCCchhhHHHHHHHHHHHHHHHHHHhCCccCCCCCchh---HHHHHHH-HHHHHHHhhhhhccchHH
Q 043019           28 GIIMVNKALMATYGFSFATTLTGLHFATTTMLTTFLRWLGYIQTSHLPFSE---LVRFVVF-ANFSIVGMNVSLMWNSVG  103 (204)
Q Consensus        28 ~~~~~NK~il~~~~f~~P~~Lt~~q~~~~~~~~~i~~~~~~~~~~~~~~~~---~~plsl~-~~~~i~~~n~sl~~~svs  103 (204)
                      .-....|...++.+-+ +..+..+++.++.+.+.+....... .+..+.+.   .+-++++ ......+-+.++++.+.+
T Consensus       142 ~~~~~~k~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~  219 (260)
T TIGR00950       142 LGTVLYKRLVKKEGPE-LLQFTGWVLLLGALLLLPFAWFLGP-NPQALSLQWGALLYLGLIGTALAYFLWNKGLTLVDPS  219 (260)
T ss_pred             HHHHHHhHHhhcCCch-HHHHHHHHHHHHHHHHHHHHHhcCC-CCCcchHHHHHHHHHHHHHHHHHHHHHHHHHhcCCch
Confidence            3345677766543322 4556667888887777665433221 11223333   3335544 346777889999999999


Q ss_pred             HHHHHhhhhhHHHHHHHHHhcceecCcchhhhhhhhhhhh
Q 043019          104 FYQIAKLSMIPVSCFLEVVLDKVRYSRDTKLSILLVLFGV  143 (204)
Q Consensus       104 ~~qi~K~~~pv~~~l~~~~~~~~~~s~~~~~sl~~i~~Gv  143 (204)
                      ...++..+.|++.+++++++++|+++..++.+..++..|+
T Consensus       220 ~~s~~~~~~pv~~~ll~~~~~~E~~~~~~~~G~~li~~g~  259 (260)
T TIGR00950       220 AASILALAEPLVALLLGLLILGETLSLPQLIGGALIIAAV  259 (260)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhc
Confidence            9999999999999999999999999999999999999986

>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]

Probab=97.78  E-value=4.4e-05  Score=62.05  Aligned_cols=111  Identities=14%  Similarity=0.028  Sum_probs=97.6

Q ss_pred             chhHHHHHHHHHHHHHHhhhhhccchHHHHHHHhhhhhHHHHHHHHHhcceecCcchhhhhhhhhhhheeeeecccc--c
Q 043019           76 FSELVRFVVFANFSIVGMNVSLMWNSVGFYQIAKLSMIPVSCFLEVVLDKVRYSRDTKLSILLVLFGVGVCTVTDVS--V  153 (204)
Q Consensus        76 ~~~~~plsl~~~~~i~~~n~sl~~~svs~~qi~K~~~pv~~~l~~~~~~~~~~s~~~~~sl~~i~~Gv~~~~~~d~~--~  153 (204)
                      +++..|.+++..+.-..--.+++..+.+-.+.+-++.-.|+.+++++.+|+|+...+.++.++.+.|+.+.++-|.+  .
T Consensus        53 ~~~taPF~i~Wt~aNY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~~~~~kIlaailAI~GiVmiay~DN~~a~  132 (290)
T KOG4314|consen   53 FIRTAPFSIFWTGANYLYLLALKKISASDASAIFACNAAFVFILAIIVLGDRFMGFKILAAILAIGGIVMIAYADNEHAD  132 (290)
T ss_pred             eeeecceEEEEecCCcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHHhccchhhhhHHHHHHHhCcEEEEEeccchhhh
Confidence            36677888888877777778999999999999999999999999999999999999999999999999999988764  5


Q ss_pred             cHHHHHHHHHHHHHHHHHHHHHHhhhccccccc
Q 043019          154 NAKGFIAAFVAVWSTAMQQYHVILNISVSITHL  186 (204)
Q Consensus       154 ~~~G~~~~l~s~~~~a~~~i~~~~~~~~~~~~~  186 (204)
                      ++.|+..++.|...+|+|.+.-|.-....++..
T Consensus       133 e~iGi~~AV~SA~~aAlYKV~FK~~iGnAn~Gd  165 (290)
T KOG4314|consen  133 EIIGIACAVGSAFMAALYKVLFKMFIGNANFGD  165 (290)
T ss_pred             hhhhHHHHHHHHHHHHHHHHHHHHHhccCcchh
Confidence            799999999999999999999998554444443

>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional

Probab=97.74  E-value=0.00043  Score=51.24  Aligned_cols=62  Identities=13%  Similarity=-0.027  Sum_probs=57.3

Q ss_pred             HHHHHHHHhhhhhccchHHHHHHHhhhhhHHHHHHHHHhcceecCcchhhhhhhhhhhheee
Q 043019           85 FANFSIVGMNVSLMWNSVGFYQIAKLSMIPVSCFLEVVLDKVRYSRDTKLSILLVLFGVGVC  146 (204)
Q Consensus        85 ~~~~~i~~~n~sl~~~svs~~qi~K~~~pv~~~l~~~~~~~~~~s~~~~~sl~~i~~Gv~~~  146 (204)
                      .+.....+-..+++..|++....+-+..++.+++.+++++|||.+++++.++.++++|+.+.
T Consensus        46 ~~~l~~~~~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~ls~~~~~Gi~lii~Gv~~i  107 (111)
T PRK15051         46 CLGLAMVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSPRHWCGVAFIIGGIVIL  107 (111)
T ss_pred             HHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHH
Confidence            45677888889999999999999999999999999999999999999999999999998654

>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]

Probab=97.54  E-value=4.7e-05  Score=64.39  Aligned_cols=148  Identities=15%  Similarity=0.098  Sum_probs=102.7

Q ss_pred             HHHHHHHHHHHHHHhhhcCCCchhhHHHHHHHHHHHHHHHHH---HhCCccCCCCCchhH-HHHHHHHHHHHHHhhhhhc
Q 043019           23 VVTSVGIIMVNKALMATYGFSFATTLTGLHFATTTMLTTFLR---WLGYIQTSHLPFSEL-VRFVVFANFSIVGMNVSLM   98 (204)
Q Consensus        23 ~~~S~~~~~~NK~il~~~~f~~P~~Lt~~q~~~~~~~~~i~~---~~~~~~~~~~~~~~~-~plsl~~~~~i~~~n~sl~   98 (204)
                      +.++.+++...|-+..+     |.-+...++++-.+..+.+-   +.+.+-++  +-|++ +.=++.-...+.+.-+|++
T Consensus        47 ~ff~~~~vv~t~~~e~~-----p~e~a~~r~l~~mlit~pcliy~~~~v~gp~--g~R~~LiLRg~mG~tgvmlmyya~~  119 (346)
T KOG4510|consen   47 YFFNSCMVVSTKVLEND-----PMELASFRLLVRMLITYPCLIYYMQPVIGPE--GKRKWLILRGFMGFTGVMLMYYALM  119 (346)
T ss_pred             HHHhhHHHhhhhhhccC-----hhHhhhhhhhhehhhhheEEEEEeeeeecCC--CcEEEEEeehhhhhhHHHHHHHHHh
Confidence            46777777777765543     66666666554444433321   11111111  12222 2234455566778889999


Q ss_pred             cchHHHHHHHhhhhhHHHHHHHHHhcceecCcchhhhhhhhhhhheeeee-----ccc---------cccHHHHHHHHHH
Q 043019           99 WNSVGFYQIAKLSMIPVSCFLEVVLDKVRYSRDTKLSILLVLFGVGVCTV-----TDV---------SVNAKGFIAAFVA  164 (204)
Q Consensus        99 ~~svs~~qi~K~~~pv~~~l~~~~~~~~~~s~~~~~sl~~i~~Gv~~~~~-----~d~---------~~~~~G~~~~l~s  164 (204)
                      |.|++=..++-.++|++|.++++.++||++|+...+.-.....||.+..-     +|.         +.+..|-..++.+
T Consensus       120 ~mslaDA~vItFssPvft~ifaw~~LkE~~t~~eaL~s~itl~GVVLIvRPpFlFG~~t~g~~~s~~~~~~~gt~aai~s  199 (346)
T KOG4510|consen  120 YMSLADAVVITFSSPVFTIIFAWAFLKEPFTKFEALGSLITLLGVVLIVRPPFLFGDTTEGEDSSQVEYDIPGTVAAISS  199 (346)
T ss_pred             hcchhheEEEEecChHHHHHHHHHHHcCCCcHHHHHHHHHhhheEEEEecCCcccCCCccccccccccccCCchHHHHHh
Confidence            99999999999999999999999999999999999999999999998763     221         2467788888888


Q ss_pred             HHHHHHHHHHHHh
Q 043019          165 VWSTAMQQYHVIL  177 (204)
Q Consensus       165 ~~~~a~~~i~~~~  177 (204)
                      .+..|---|..++
T Consensus       200 ~lf~asvyIilR~  212 (346)
T KOG4510|consen  200 VLFGASVYIILRY  212 (346)
T ss_pred             HhhhhhHHHHHHH
Confidence            8877755555555

>TIGR00803 nst UDP-galactose transporter

Probab=97.43  E-value=0.00012  Score=60.12  Aligned_cols=97  Identities=15%  Similarity=0.066  Sum_probs=73.6

Q ss_pred             chHHHHHHHhhhhhHHHHHHHHHhcceecCcchhhhhhhhhhhheeeeecccc---------------------------
Q 043019          100 NSVGFYQIAKLSMIPVSCFLEVVLDKVRYSRDTKLSILLVLFGVGVCTVTDVS---------------------------  152 (204)
Q Consensus       100 ~svs~~qi~K~~~pv~~~l~~~~~~~~~~s~~~~~sl~~i~~Gv~~~~~~d~~---------------------------  152 (204)
                      +++|.+...|+..++++++.++.+.+||++..++++..++..|+.....+|.+                           
T Consensus         2 isvPa~~~~~s~~l~~v~l~~~~~~~~~~~~~~i~~~~l~~~g~l~~~ls~~q~~al~~l~~~~~~~~~~~~~~~~~~~g   81 (222)
T TIGR00803         2 LSVPIHIIFKQNNLVLIALGNLLAAGKQVTQLKILSTALMTLGSLVASLGDDQWFSLKLLKLGVAIVQMVQSSAKTLMFG   81 (222)
T ss_pred             ccccchHHHHhcchHHHHHhcccccceeeehHHHHHHHHHHHHHHHhHhhHHHHHHHHHHHHhHeeeecCCCCccccccc
Confidence            58999999999999999999999999999999999999999998864444332                           


Q ss_pred             ccHHHHHHHHHHHHHHHHHHHHHHhhhccccccccchhhhhhhhhcee
Q 043019          153 VNAKGFIAAFVAVWSTAMQQYHVILNISVSITHLFLCLNHHIVCIPVV  200 (204)
Q Consensus       153 ~~~~G~~~~l~s~~~~a~~~i~~~~~~~~~~~~~~~~~~~~~~slp~~  200 (204)
                      ..+.|....+.+....++-.++.++  ..|++  +..+|.+..++|.+
T Consensus        82 ~~~~g~~~~l~a~~~~~~~~~y~e~--~~k~~--~~~~~~~~~~l~~~  125 (222)
T TIGR00803        82 NPVVGLSAVLSALLSSGFAGVYFEK--ILKDG--DTMFWSRNLQLPLF  125 (222)
T ss_pred             cHHHHHHHHHHHHHHHhhhHHHHHH--cccCC--CCchHHHHHHHHHH
Confidence            2356777777777777777777777  22222  22366666666654

NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.

>COG2510 Predicted membrane protein [Function unknown]

Probab=97.43  E-value=0.0026  Score=48.27  Aligned_cols=124  Identities=10%  Similarity=0.032  Sum_probs=90.8

Q ss_pred             HHHHHHHHHHHHHHHhhhcCCCchhhHHHHHHHHHHHHHHHHH-HhCCcc-CCCCCchhH---HHHHHHHHHHHHHhhhh
Q 043019           22 NVVTSVGIIMVNKALMATYGFSFATTLTGLHFATTTMLTTFLR-WLGYIQ-TSHLPFSEL---VRFVVFANFSIVGMNVS   96 (204)
Q Consensus        22 ~~~~S~~~~~~NK~il~~~~f~~P~~Lt~~q~~~~~~~~~i~~-~~~~~~-~~~~~~~~~---~plsl~~~~~i~~~n~s   96 (204)
                      +..+.....++-|.-+++  .+ |.+=|..+..+..+++.... ..|..+ +...+.|.+   ..-++....+-.+=-.+
T Consensus        11 sA~fa~L~~iF~KIGl~~--vd-p~~At~IRtiVi~~~l~~v~~~~g~~~~~~~~~~k~~lflilSGla~glswl~Yf~A   87 (140)
T COG2510          11 SALFAGLTPIFAKIGLEG--VD-PDFATTIRTIVILIFLLIVLLVTGNWQAGGEIGPKSWLFLILSGLAGGLSWLLYFRA   87 (140)
T ss_pred             HHHHHHHHHHHHHHhccc--cC-ccHHHHHHHHHHHHHHHHHHHhcCceecccccCcceehhhhHHHHHHHHHHHHHHHH
Confidence            334455555678887764  45 88888899888777766633 344433 223444443   33445566666677778


Q ss_pred             hccchHHHHHHHhhhhhHHHHHHHHHhcceecCcchhhhhhhhhhhheeeee
Q 043019           97 LMWNSVGFYQIAKLSMIPVSCFLEVVLDKVRYSRDTKLSILLVLFGVGVCTV  148 (204)
Q Consensus        97 l~~~svs~~qi~K~~~pv~~~l~~~~~~~~~~s~~~~~sl~~i~~Gv~~~~~  148 (204)
                      ++....|-.--+-..+|+++++++++++|||+|.+++..+.++++|+.+.+.
T Consensus        88 Lk~G~as~VvPldk~svvl~~lls~lfL~E~ls~~~~iG~~LI~~Gailvs~  139 (140)
T COG2510          88 LKKGKASRVVPLDKTSVVLAVLLSILFLGERLSLPTWIGIVLIVIGAILVSL  139 (140)
T ss_pred             HhcCCcceEEEcccccHHHHHHHHHHHhcCCCCHHHHHHHHHHHhCeeeEec
Confidence            8888888777788899999999999999999999999999999999987653

>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional

Probab=97.40  E-value=0.0045  Score=52.86  Aligned_cols=108  Identities=16%  Similarity=0.068  Sum_probs=80.0

Q ss_pred             chhhHHHHHHHHHHHHHHHHHHh-CCccCCCCC---chhHHHHHHH-HHHHHHHhhhhhccchHHHHHHHhhhhhHHHHH
Q 043019           44 FATTLTGLHFATTTMLTTFLRWL-GYIQTSHLP---FSELVRFVVF-ANFSIVGMNVSLMWNSVGFYQIAKLSMIPVSCF  118 (204)
Q Consensus        44 ~P~~Lt~~q~~~~~~~~~i~~~~-~~~~~~~~~---~~~~~plsl~-~~~~i~~~n~sl~~~svs~~qi~K~~~pv~~~l  118 (204)
                      .|...+.+|+.++...+.+.... +.......+   +..++-+++. ......+-+.++++.+.+...+.-..+|++.++
T Consensus       176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~i~~s~~~~~l~~~~~~~~~~~~~s~~~~l~Pi~a~i  255 (292)
T PRK11272        176 VGMMAGAAEMLAAGVVLLIASLLSGERLTALPTLSGFLALGYLAVFGSIIAISAYMYLLRNVRPALATSYAYVNPVVAVL  255 (292)
T ss_pred             cchHHHHHHHHHHHHHHHHHHHHcCCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHH
Confidence            35667889998887776664332 211111112   2334444543 446667888999999999999999999999999


Q ss_pred             HHHHhcceecCcchhhhhhhhhhhheeeeeccc
Q 043019          119 LEVVLDKVRYSRDTKLSILLVLFGVGVCTVTDV  151 (204)
Q Consensus       119 ~~~~~~~~~~s~~~~~sl~~i~~Gv~~~~~~d~  151 (204)
                      .++++++|+++..++.+..++..|+.+....+.
T Consensus       256 ~~~~~l~E~~t~~~iiG~~lIi~gv~~~~~~~~  288 (292)
T PRK11272        256 LGTGLGGETLSPIEWLALGVIVFAVVLVTLGKY  288 (292)
T ss_pred             HHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHh
Confidence            999999999999999999999999877655443

>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins

Probab=97.36  E-value=0.0045  Score=47.27  Aligned_cols=122  Identities=16%  Similarity=0.033  Sum_probs=85.4

Q ss_pred             HHHHHHHHHHHHhhh-----cCCCchhhHHHHHHHHHHHHHHHHHH-hCCccC-------C--CC--C---chhHHHHHH
Q 043019           25 TSVGIIMVNKALMAT-----YGFSFATTLTGLHFATTTMLTTFLRW-LGYIQT-------S--HL--P---FSELVRFVV   84 (204)
Q Consensus        25 ~S~~~~~~NK~il~~-----~~f~~P~~Lt~~q~~~~~~~~~i~~~-~~~~~~-------~--~~--~---~~~~~plsl   84 (204)
                      ++..-..+.|..+++     .+.+ |..+....-..+.+.+.+... .+..+.       +  +.  +   +...+..++
T Consensus        11 ~~al~~v~~~~~~~~~~~~~~~~~-~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (153)
T PF03151_consen   11 FSALRNVLIKKLLKKVSSNSKKLN-PLNLLYYNSPISFIILLPLAFLLEGPQLSSFFSEIFGEELSSDPNFIFLLILSGL   89 (153)
T ss_pred             HHHHHHHHHHHHHhcccccccCCC-HHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHhhhhhhcchHHHHHHHHHHHH
Confidence            333334455666665     4666 777776666666666666432 222110       1  11  1   122334455


Q ss_pred             HHHHHHHHhhhhhccchHHHHHHHhhhhhHHHHHHHHHhcceecCcchhhhhhhhhhhheeee
Q 043019           85 FANFSIVGMNVSLMWNSVGFYQIAKLSMIPVSCFLEVVLDKVRYSRDTKLSILLVLFGVGVCT  147 (204)
Q Consensus        85 ~~~~~i~~~n~sl~~~svs~~qi~K~~~pv~~~l~~~~~~~~~~s~~~~~sl~~i~~Gv~~~~  147 (204)
                      .....-..+...+++.|.-.++++.....+++.+++.++++|+.+..++.+..+...|+.+.+
T Consensus        90 ~~~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~~~~G~~l~~~G~~~Ys  152 (153)
T PF03151_consen   90 LAFLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPLQIIGIVLALVGVLLYS  152 (153)
T ss_pred             HHHHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHHHHHHHHHHHHHHheee
Confidence            555666677788899999999999999999999999999999999999999999999988764

O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.

>PLN00411 nodulin MtN21 family protein; Provisional

Probab=97.29  E-value=0.0041  Score=55.13  Aligned_cols=115  Identities=12%  Similarity=0.136  Sum_probs=79.0

Q ss_pred             HHHHHhhhcCCCchhhHHHHHHHHHHHHHHHHHHh-CCccCC----CCCc--hhHHHHHHHHHHHHHHhhhhhccchHHH
Q 043019           32 VNKALMATYGFSFATTLTGLHFATTTMLTTFLRWL-GYIQTS----HLPF--SELVRFVVFANFSIVGMNVSLMWNSVGF  104 (204)
Q Consensus        32 ~NK~il~~~~f~~P~~Lt~~q~~~~~~~~~i~~~~-~~~~~~----~~~~--~~~~plsl~~~~~i~~~n~sl~~~svs~  104 (204)
                      ..|....+  +|.+...+++|+.+..+...+.... ...+.+    ..+.  ..++-.++...+...+-|.+.++.+.+.
T Consensus       207 l~~~~~~~--~~~~~~~t~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~y~~i~t~lay~lw~~~v~~~ga~~  284 (358)
T PLN00411        207 LQAHIMSE--YPAAFTVSFLYTVCVSIVTSMIGLVVEKNNPSVWIIHFDITLITIVTMAIITSVYYVIHSWTVRHKGPLY  284 (358)
T ss_pred             HHHHHHHH--cCcHhHHHHHHHHHHHHHHHHHHHHHccCCcccceeccchHHHHHHHHHHHHHHHHHHHHHHHhccCchH
Confidence            34444443  4545577888888776665443222 111111    1111  1122233433445567888999999999


Q ss_pred             HHHHhhhhhHHHHHHHHHhcceecCcchhhhhhhhhhhheeeee
Q 043019          105 YQIAKLSMIPVSCFLEVVLDKVRYSRDTKLSILLVLFGVGVCTV  148 (204)
Q Consensus       105 ~qi~K~~~pv~~~l~~~~~~~~~~s~~~~~sl~~i~~Gv~~~~~  148 (204)
                      ..+.-...|++.+++++++++|++++.++.+.+++++|+.+...
T Consensus       285 as~~~~L~PV~a~llg~l~LgE~lt~~~~iG~~LIl~Gv~l~~~  328 (358)
T PLN00411        285 LAIFKPLSILIAVVMGAIFLNDSLYLGCLIGGILITLGFYAVMW  328 (358)
T ss_pred             HHHHHhHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHh
Confidence            99999999999999999999999999999999999999877653

>PRK10452 multidrug efflux system protein MdtJ; Provisional

Probab=97.08  E-value=0.0037  Score=46.98  Aligned_cols=73  Identities=11%  Similarity=0.067  Sum_probs=62.6

Q ss_pred             hhHHHHHHHHHHHHHHhhhhhccchHHHHHHH-hhhhhHHHHHHHHHhcceecCcchhhhhhhhhhhheeeeec
Q 043019           77 SELVRFVVFANFSIVGMNVSLMWNSVGFYQIA-KLSMIPVSCFLEVVLDKVRYSRDTKLSILLVLFGVGVCTVT  149 (204)
Q Consensus        77 ~~~~plsl~~~~~i~~~n~sl~~~svs~~qi~-K~~~pv~~~l~~~~~~~~~~s~~~~~sl~~i~~Gv~~~~~~  149 (204)
                      ...+..-+++..+..+-..++++.|++....+ .....+.+.+.++++++|+.++.++..+.++++|+...-..
T Consensus        31 ~~~~~~i~~~~~sf~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~~~~~gi~lIi~GVi~l~l~  104 (120)
T PRK10452         31 GGFILMLVMISLSYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLMKIAGLTTLVAGIVLIKSG  104 (120)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhcC
Confidence            34455666888888899999999999987776 57899999999999999999999999999999998775443

>PRK11431 multidrug efflux system protein; Provisional

Probab=97.02  E-value=0.0043  Score=45.55  Aligned_cols=68  Identities=16%  Similarity=-0.045  Sum_probs=57.1

Q ss_pred             HHHHHHHHHHHHHHhhhhhccchHHHHHHHh-hhhhHHHHHHHHHhcceecCcchhhhhhhhhhhheee
Q 043019           79 LVRFVVFANFSIVGMNVSLMWNSVGFYQIAK-LSMIPVSCFLEVVLDKVRYSRDTKLSILLVLFGVGVC  146 (204)
Q Consensus        79 ~~plsl~~~~~i~~~n~sl~~~svs~~qi~K-~~~pv~~~l~~~~~~~~~~s~~~~~sl~~i~~Gv~~~  146 (204)
                      .+..-+.+..+..+-..+++..|++..-.+= ....+.+.+.+++++||+.++.++.++.+++.|+..-
T Consensus        32 ~~~~i~~~~~sf~~Ls~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~~~~~~gi~lIi~GVv~l  100 (105)
T PRK11431         32 SIITVTAMIVSMALLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESASPARLLSLALIVAGIIGL  100 (105)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhh
Confidence            3445567778888888899999999865544 4888999999999999999999999999999998754

>PRK09541 emrE multidrug efflux protein; Reviewed

Probab=97.01  E-value=0.0041  Score=46.03  Aligned_cols=66  Identities=15%  Similarity=0.058  Sum_probs=57.2

Q ss_pred             HHHHHHHHHHHhhhhhccchHHHHHHHhh-hhhHHHHHHHHHhcceecCcchhhhhhhhhhhheeee
Q 043019           82 FVVFANFSIVGMNVSLMWNSVGFYQIAKL-SMIPVSCFLEVVLDKVRYSRDTKLSILLVLFGVGVCT  147 (204)
Q Consensus        82 lsl~~~~~i~~~n~sl~~~svs~~qi~K~-~~pv~~~l~~~~~~~~~~s~~~~~sl~~i~~Gv~~~~  147 (204)
                      .-+.+..+..+-..+++..|++.....-+ ...+.+.+.++++++|+.++.++.++.++++|+..--
T Consensus        36 ~~~~~~~sf~~l~~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~~~~~~~gi~lIi~GVi~l~  102 (110)
T PRK09541         36 TIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLVIN  102 (110)
T ss_pred             HHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHh
Confidence            44566677777788999999999888865 6889999999999999999999999999999987653

>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]

Probab=97.01  E-value=0.027  Score=47.57  Aligned_cols=137  Identities=15%  Similarity=0.020  Sum_probs=98.6

Q ss_pred             HHHHHhhhcCCCchhhHHHHHHHHHHHHHHHHHHhCCccCCCCCchhHHHHHHHHHHHHHHhhhhhccchHHHHHHHhhh
Q 043019           32 VNKALMATYGFSFATTLTGLHFATTTMLTTFLRWLGYIQTSHLPFSELVRFVVFANFSIVGMNVSLMWNSVGFYQIAKLS  111 (204)
Q Consensus        32 ~NK~il~~~~f~~P~~Lt~~q~~~~~~~~~i~~~~~~~~~~~~~~~~~~plsl~~~~~i~~~n~sl~~~svs~~qi~K~~  111 (204)
                      +-|.+|-.  +. |.-.++.+..++.+++....|-...+..+-+++.+...++....+-.+=-.|++.+|.+....+..+
T Consensus        30 ~Ak~LFP~--vG-~~g~t~lRl~~aaLIll~l~RPwr~r~~~~~~~~~~~yGvsLg~MNl~FY~si~riPlGiAVAiEF~  106 (292)
T COG5006          30 FAKSLFPL--VG-AAGVTALRLAIAALILLALFRPWRRRLSKPQRLALLAYGVSLGGMNLLFYLSIERIPLGIAVAIEFT  106 (292)
T ss_pred             HHHHHccc--cC-hhhHHHHHHHHHHHHHHHHhhHHHhccChhhhHHHHHHHHHHHHHHHHHHHHHHhccchhhhhhhhc
Confidence            45666654  33 7889999999999888775542222223334666777777777777777788999999999999999


Q ss_pred             hhHHHHHHHHHhcceecCcchhhhhhhhhhhheeeee-c--cccccHHHHHHHHHHHHHHHHHHHHHHh
Q 043019          112 MIPVSCFLEVVLDKVRYSRDTKLSILLVLFGVGVCTV-T--DVSVNAKGFIAAFVAVWSTAMQQYHVIL  177 (204)
Q Consensus       112 ~pv~~~l~~~~~~~~~~s~~~~~sl~~i~~Gv~~~~~-~--d~~~~~~G~~~~l~s~~~~a~~~i~~~~  177 (204)
                      -|+.+.+++    .||..-..|.+  +.+.|..+-.- +  ..+.|+.|..+++.+..+.+.|.+..||
T Consensus       107 GPL~vA~~~----sRr~~d~vwva--LAvlGi~lL~p~~~~~~~lDp~Gv~~Al~AG~~Wa~YIv~G~r  169 (292)
T COG5006         107 GPLAVALLS----SRRLRDFVWVA--LAVLGIWLLLPLGQSVWSLDPVGVALALGAGACWALYIVLGQR  169 (292)
T ss_pred             cHHHHHHHh----ccchhhHHHHH--HHHHHHHhheeccCCcCcCCHHHHHHHHHHhHHHHHHHHHcch
Confidence            999888764    34444444444  44555444322 2  2458999999999999999999999988

>PRK10650 multidrug efflux system protein MdtI; Provisional

Probab=96.89  E-value=0.01  Score=43.84  Aligned_cols=93  Identities=8%  Similarity=-0.041  Sum_probs=64.9

Q ss_pred             HHHHHHHHHHHHHhCCccCCCCC-chhHHHHHHHHHHHHHHhhhhhccchHHHHHHH-hhhhhHHHHHHHHHhcceecCc
Q 043019           53 FATTTMLTTFLRWLGYIQTSHLP-FSELVRFVVFANFSIVGMNVSLMWNSVGFYQIA-KLSMIPVSCFLEVVLDKVRYSR  130 (204)
Q Consensus        53 ~~~~~~~~~i~~~~~~~~~~~~~-~~~~~plsl~~~~~i~~~n~sl~~~svs~~qi~-K~~~pv~~~l~~~~~~~~~~s~  130 (204)
                      ++...+...+.........+.++ +.......+.+..+..+-..+++..|++..-.+ -....+.+.+.+++++||+.++
T Consensus        11 ~L~~Ai~~Ev~~t~~Lk~s~gf~~~~~~~~~~~~~~~sf~~Ls~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~~   90 (109)
T PRK10650         11 WLALAIVLEIVANIFLKFSDGFRRKIYGILSLAAVLAAFSALSQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNR   90 (109)
T ss_pred             HHHHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCCH
Confidence            34444555554433221122221 222333445666788888899999999986554 4477899999999999999999


Q ss_pred             chhhhhhhhhhhhee
Q 043019          131 DTKLSILLVLFGVGV  145 (204)
Q Consensus       131 ~~~~sl~~i~~Gv~~  145 (204)
                      .++.++.+++.|+..
T Consensus        91 ~~~~gi~lIi~GVi~  105 (109)
T PRK10650         91 KGWIGLVLLLAGMVM  105 (109)
T ss_pred             HHHHHHHHHHHHHHH
Confidence            999999999999864

>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator

Probab=96.81  E-value=0.0051  Score=52.64  Aligned_cols=118  Identities=11%  Similarity=0.005  Sum_probs=79.1

Q ss_pred             HHHHHHHhhhcCCCchhhHHHHHHHHHHHHHHHHHH-hCCccCC-----C----CCchhHHHHH----H-HHHHHHHHhh
Q 043019           30 IMVNKALMATYGFSFATTLTGLHFATTTMLTTFLRW-LGYIQTS-----H----LPFSELVRFV----V-FANFSIVGMN   94 (204)
Q Consensus        30 ~~~NK~il~~~~f~~P~~Lt~~q~~~~~~~~~i~~~-~~~~~~~-----~----~~~~~~~pls----l-~~~~~i~~~n   94 (204)
                      ....|...++.+.+ |..++.+|+..+.+.+.+... .+..+..     +    ..........    . .+.....+.+
T Consensus       161 ~v~~k~~~~~~~~~-~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (302)
T TIGR00817       161 NIFSKKAMTIKSLD-KTNLYAYISIMSLFLLSPPAFITEGPPFLPHGFMQAISGVNVTKIYTVSLVAAMGFFHFYQQVAF  239 (302)
T ss_pred             HHHHHHhhccCCCC-cccHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHhhcccCchHHHHHHHHHHHHHHHHHHHHHH
Confidence            34555555533445 889999999888877666432 2211100     0    1111112111    1 1111113445


Q ss_pred             hhhccchHHHHHHHhhhhhHHHHHHHHHhcceecCcchhhhhhhhhhhheeeee
Q 043019           95 VSLMWNSVGFYQIAKLSMIPVSCFLEVVLDKVRYSRDTKLSILLVLFGVGVCTV  148 (204)
Q Consensus        95 ~sl~~~svs~~qi~K~~~pv~~~l~~~~~~~~~~s~~~~~sl~~i~~Gv~~~~~  148 (204)
                      .++++.+...+.+.=...|++++++++++++|+.+..++.+..++.+|+.+...
T Consensus       240 ~~l~~~sa~t~sv~~~l~pv~~~~~~~~~lge~lt~~~~~G~~lil~Gv~l~~~  293 (302)
T TIGR00817       240 MLLGRVSPLTHSVGNCMKRVVVIVVSILFFGTKISPQQVFGTGIAIAGVFLYSR  293 (302)
T ss_pred             HHHccCCchHHHHHhhhhhhheeeeehhhcCCCCchhHHHHHHHHHHHHHHHHH
Confidence            789999999999999999999999999999999999999999999999876543

specificities overlap.

>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional

Probab=96.70  E-value=0.0056  Score=46.58  Aligned_cols=71  Identities=10%  Similarity=0.037  Sum_probs=60.9

Q ss_pred             HHHHHH-HHHHHHHHhhhhhccchHHHHHHHhhhhhHHHHHHHHH--hcceecCcchhhhhhhhhhhheeeeec
Q 043019           79 LVRFVV-FANFSIVGMNVSLMWNSVGFYQIAKLSMIPVSCFLEVV--LDKVRYSRDTKLSILLVLFGVGVCTVT  149 (204)
Q Consensus        79 ~~plsl-~~~~~i~~~n~sl~~~svs~~qi~K~~~pv~~~l~~~~--~~~~~~s~~~~~sl~~i~~Gv~~~~~~  149 (204)
                      ++.+++ ++.+...+=+.+++..|++....+-+..++.+.+.++.  ++||+.|+.++..+.++++|+.+...+
T Consensus        50 ~i~lgl~~~~la~~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls~~~~iGi~lIi~GV~lv~~~  123 (129)
T PRK02971         50 AVLLGLAGYALSMLCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFSLKKTLGVACIMLGVWLINLP  123 (129)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhccC
Confidence            344554 67778889999999999999999999998888888885  899999999999999999999886544

>PRK10532 threonine and homoserine efflux system; Provisional

Probab=96.65  E-value=0.042  Score=46.96  Aligned_cols=68  Identities=4%  Similarity=-0.068  Sum_probs=58.9

Q ss_pred             HHHHHH-HHHHHHHhhhhhccchHHHHHHHhhhhhHHHHHHHHHhcceecCcchhhhhhhhhhhheeee
Q 043019           80 VRFVVF-ANFSIVGMNVSLMWNSVGFYQIAKLSMIPVSCFLEVVLDKVRYSRDTKLSILLVLFGVGVCT  147 (204)
Q Consensus        80 ~plsl~-~~~~i~~~n~sl~~~svs~~qi~K~~~pv~~~l~~~~~~~~~~s~~~~~sl~~i~~Gv~~~~  147 (204)
                      +-++++ ..+...+-|.++++.+.+...+.-..+|++..++++++++|+++..++....++++|++..+
T Consensus       212 l~lgv~~t~~~~~l~~~~~~~~~a~~as~~~~l~Pv~a~l~~~l~lgE~~~~~~~iG~~lIl~~~~~~~  280 (293)
T PRK10532        212 LAVAILSTALPYSLEMIALTRLPTRTFGTLMSMEPALAAVSGMIFLGETLTLIQWLALGAIIAASMGST  280 (293)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhcChhHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHH
Confidence            345543 34666688999999999999999999999999999999999999999999999998887664

>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]

Probab=96.64  E-value=0.012  Score=43.24  Aligned_cols=69  Identities=20%  Similarity=0.045  Sum_probs=56.7

Q ss_pred             hhHHHHHHHHHHHHHHhhhhhccchHHHH-HHHhhhhhHHHHHHHHHhcceecCcchhhhhhhhhhhhee
Q 043019           77 SELVRFVVFANFSIVGMNVSLMWNSVGFY-QIAKLSMIPVSCFLEVVLDKVRYSRDTKLSILLVLFGVGV  145 (204)
Q Consensus        77 ~~~~plsl~~~~~i~~~n~sl~~~svs~~-qi~K~~~pv~~~l~~~~~~~~~~s~~~~~sl~~i~~Gv~~  145 (204)
                      +..+..-+++..+..+--.+++..|++.. -+--..-.+.+.+.++++++|+.+..++.++.++++|+..
T Consensus        31 ~~~il~~v~~~~sf~~Ls~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~~~~~~gl~LiiaGvi~  100 (106)
T COG2076          31 WPSILTIVGYGLSFYLLSLALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLSLIKLLGLALILAGVIG  100 (106)
T ss_pred             chHHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHHHHH
Confidence            33444555677777788889999999874 4556677899999999999999999999999999999865

>PRK11689 aromatic amino acid exporter; Provisional

Probab=96.50  E-value=0.027  Score=48.19  Aligned_cols=67  Identities=16%  Similarity=0.146  Sum_probs=58.9

Q ss_pred             HHHHHHHHHHHhhhhhccchHHHHHHHhhhhhHHHHHHHHHhcceecCcchhhhhhhhhhhheeeee
Q 043019           82 FVVFANFSIVGMNVSLMWNSVGFYQIAKLSMIPVSCFLEVVLDKVRYSRDTKLSILLVLFGVGVCTV  148 (204)
Q Consensus        82 lsl~~~~~i~~~n~sl~~~svs~~qi~K~~~pv~~~l~~~~~~~~~~s~~~~~sl~~i~~Gv~~~~~  148 (204)
                      .++.......+-|.++++.+.+...+.=...|++.+++++++++|+++..++.+..++..|+.+...
T Consensus       221 ~~~~t~~~~~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~~~lgE~~~~~~~iG~~lI~~gv~~~~~  287 (295)
T PRK11689        221 AAAAMGFGYAAWNVGILHGNMTLLATASYFTPVLSAALAALLLSTPLSFSFWQGVAMVTAGSLLCWL  287 (295)
T ss_pred             HHHHHHHHHHHHHHHHHccCHHHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHhHHHHhh
Confidence            3444445667789999999999999999999999999999999999999999999999999876644

>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional

Probab=96.47  E-value=0.059  Score=47.45  Aligned_cols=125  Identities=10%  Similarity=0.011  Sum_probs=81.4

Q ss_pred             HHHHHHHHHHHHHHHhhhcC-----CCchhhHHHHHHHHHHHHHHHHHH-hCCcc-----------CCCCCchhHHHHHH
Q 043019           22 NVVTSVGIIMVNKALMATYG-----FSFATTLTGLHFATTTMLTTFLRW-LGYIQ-----------TSHLPFSELVRFVV   84 (204)
Q Consensus        22 ~~~~S~~~~~~NK~il~~~~-----f~~P~~Lt~~q~~~~~~~~~i~~~-~~~~~-----------~~~~~~~~~~plsl   84 (204)
                      +.++...-....|..+++.+     .+ +..+...++..+.+.+.+... .+..+           .....+...+...+
T Consensus       202 s~~~~a~~~i~~k~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~lp~~~~~e~~~~~~~~~~~~~~~~~~~~~~~l~~i~  280 (350)
T PTZ00343        202 SNLGSSLRSIFAKKTMKNKSEIGENLT-ASNIYMLLTLIASLISLPLVLFFEGKKWVPVWTNYTANMTNYTKGIIIFKIF  280 (350)
T ss_pred             HHHHHHHHHHHHHHHhcccccccccCC-HHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhhhcccccchHHHHHHHH
Confidence            33444444455666666432     33 444556666777766655322 11100           01111222333333


Q ss_pred             HHHHHHHHhh----hhhccchHHHHHHHhhhhhHHHHHHHHHhcceecCcchhhhhhhhhhhheeee
Q 043019           85 FANFSIVGMN----VSLMWNSVGFYQIAKLSMIPVSCFLEVVLDKVRYSRDTKLSILLVLFGVGVCT  147 (204)
Q Consensus        85 ~~~~~i~~~n----~sl~~~svs~~qi~K~~~pv~~~l~~~~~~~~~~s~~~~~sl~~i~~Gv~~~~  147 (204)
                      .......+-|    .+++.++...+++.=...|++++++++++++|+.+...+.+..++++|+.+.+
T Consensus       281 ~s~l~~~l~n~~~f~~l~~~s~~t~sv~~~lk~V~~iv~s~l~~ge~lt~~~~iG~~lii~Gv~lYs  347 (350)
T PTZ00343        281 FSGVWYYLYNEVAFYCLGKVNQVTHAVANTLKRVVIIVSSIIIFQTQVTLLGYLGMAVAILGALLYS  347 (350)
T ss_pred             HHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHhhhhHHHhCCCCchHhHHHHHHHHHHHHHHh
Confidence            4445555666    49999999999999999999999999999999999999999999999987643

>PRK15430 putative chloramphenical resistance permease RarD; Provisional

Probab=96.43  E-value=0.059  Score=46.11  Aligned_cols=64  Identities=5%  Similarity=0.062  Sum_probs=56.4

Q ss_pred             HHHHHHHHHHHhhhhhccchHHHHHHHhhhhhHHHHHHHHHhcceecCcchhhhhhhhhhhhee
Q 043019           82 FVVFANFSIVGMNVSLMWNSVGFYQIAKLSMIPVSCFLEVVLDKVRYSRDTKLSILLVLFGVGV  145 (204)
Q Consensus        82 lsl~~~~~i~~~n~sl~~~svs~~qi~K~~~pv~~~l~~~~~~~~~~s~~~~~sl~~i~~Gv~~  145 (204)
                      .++.......+-|.++++.+.+.....-...|++..+.++++++|+++..++.+..++..|+.+
T Consensus       219 ~g~~t~i~~~~~~~a~~~~~a~~~s~~~~l~Pv~a~~~g~l~l~E~~~~~~~~G~~lI~~~~~v  282 (296)
T PRK15430        219 AGIVTTVPLLCFTAAATRLRLSTLGFFQYIGPTLMFLLAVTFYGEKPGADKMVTFAFIWVALAI  282 (296)
T ss_pred             HHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHH
Confidence            3445556778899999999999999999999999999999999999999999998888777644

>PRK11453 O-acetylserine/cysteine export protein; Provisional

Probab=96.26  E-value=0.11  Score=44.50  Aligned_cols=64  Identities=13%  Similarity=-0.096  Sum_probs=55.9

Q ss_pred             HHHHHHhhhhhccchHHHHHHHhhhhhHHHHHHHHHhcceecCcchhhhhhhhhhhheeeeecc
Q 043019           87 NFSIVGMNVSLMWNSVGFYQIAKLSMIPVSCFLEVVLDKVRYSRDTKLSILLVLFGVGVCTVTD  150 (204)
Q Consensus        87 ~~~i~~~n~sl~~~svs~~qi~K~~~pv~~~l~~~~~~~~~~s~~~~~sl~~i~~Gv~~~~~~d  150 (204)
                      .+...+-+.++++.+.+.....-..+|++..++++++++|+++..++....+++.|+.+...+.
T Consensus       226 ~~~~~l~~~~l~~~~a~~~s~~~~l~Pv~a~~~~~l~lgE~~~~~~~iG~~lI~~gv~l~~~~~  289 (299)
T PRK11453        226 IVGYGIWGTLLGRYETWRVAPLSLLVPVVGLASAALLLDERLTGLQFLGAVLIMAGLYINVFGL  289 (299)
T ss_pred             HHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHHhcch
Confidence            3556677788899988899999999999999999999999999999999999999987765443

>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins

Probab=96.25  E-value=0.029  Score=39.99  Aligned_cols=56  Identities=16%  Similarity=-0.040  Sum_probs=34.1

Q ss_pred             HHHHHHHHHhhhhhccchHHHHH-HHhhhhhHHHHHHHHHhcceecCcchhhhhhhh
Q 043019           84 VFANFSIVGMNVSLMWNSVGFYQ-IAKLSMIPVSCFLEVVLDKVRYSRDTKLSILLV  139 (204)
Q Consensus        84 l~~~~~i~~~n~sl~~~svs~~q-i~K~~~pv~~~l~~~~~~~~~~s~~~~~sl~~i  139 (204)
                      ..+..+..+-..++++.|++..- +......+.+.+.+.+++||+.|+.++.++.++
T Consensus        37 ~~~~~s~~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s~~~~~gi~lI   93 (93)
T PF00893_consen   37 VGYGLSFYFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLSLSKWLGIGLI   93 (93)
T ss_dssp             HHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH--------HHHHHHH
T ss_pred             HHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHhheeeC
Confidence            37778888889999999999875 456799999999999999999999999887664

They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.

>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein

Probab=96.21  E-value=0.0098  Score=50.46  Aligned_cols=62  Identities=10%  Similarity=0.062  Sum_probs=55.8

Q ss_pred             HHHHHHHHHhhhhhccchHHHHHHHhhhhhHHHHHHHHHhcceecCcchhhhhhhhhhhhee
Q 043019           84 VFANFSIVGMNVSLMWNSVGFYQIAKLSMIPVSCFLEVVLDKVRYSRDTKLSILLVLFGVGV  145 (204)
Q Consensus        84 l~~~~~i~~~n~sl~~~svs~~qi~K~~~pv~~~l~~~~~~~~~~s~~~~~sl~~i~~Gv~~  145 (204)
                      +.......+-+.++++.+.+........+|++..+++++++||+++..++.+..++..|+.+
T Consensus       219 ~~s~l~~~l~~~al~~~~a~~~~~~~~l~pv~a~l~g~~~lgE~~~~~~~iG~~lil~Gv~l  280 (281)
T TIGR03340       219 LMIGGAYALVLWAMTRLPVATVVALRNTSIVFAVVLGIWFLNERWYLTRLMGVCIIVAGLVV  280 (281)
T ss_pred             HHHHHHHHHHHHHHhhCCceEEEeecccHHHHHHHHHHHHhCCCccHHHHHHHHHHHHhHHh
Confidence            34446677888999999999999999999999999999999999999999999999999864

This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.

>KOG2766 consensus Predicted membrane protein [Function unknown]

Probab=96.05  E-value=0.0022  Score=54.23  Aligned_cols=126  Identities=13%  Similarity=0.123  Sum_probs=89.0

Q ss_pred             HHHHHHHHHHHHHhhhcCCCchhhHHHHHHHHHHHHHHHHHHhCCccCCCCCchhHHHHHHHHHHHHHHhhhhhccchHH
Q 043019           24 VTSVGIIMVNKALMATYGFSFATTLTGLHFATTTMLTTFLRWLGYIQTSHLPFSELVRFVVFANFSIVGMNVSLMWNSVG  103 (204)
Q Consensus        24 ~~S~~~~~~NK~il~~~~f~~P~~Lt~~q~~~~~~~~~i~~~~~~~~~~~~~~~~~~plsl~~~~~i~~~n~sl~~~svs  103 (204)
                      .++.+..+.|.++-+. +.+-|..-++.....-+++-...-.++. +.-+.-|++.+.++++-+-.-.+--.+++|.+..
T Consensus        28 L~~t~~a~tss~la~k-~iN~Pt~QtFl~Y~LLalVY~~~~~fR~-~~~~~~~~hYilla~~DVEaNy~vV~AyQyTsmt  105 (336)
T KOG2766|consen   28 LLITSTAFTSSELARK-GINAPTSQTFLNYVLLALVYGPIMLFRR-KYIKAKWRHYILLAFVDVEANYFVVKAYQYTSMT  105 (336)
T ss_pred             HHHHcchhhhHHHHhc-cCCCccHHHHHHHHHHHHHHhhHHHhhh-HHHHHHHHHhhheeEEeecccEEEeeehhhcchH
Confidence            4556666778876663 5677887666655543333332222221 1111235666666665443333344789999999


Q ss_pred             HHHHHhhhhhHHHHHHHHHhcceecCcchhhhhhhhhhhheeeeeccc
Q 043019          104 FYQIAKLSMIPVSCFLEVVLDKVRYSRDTKLSILLVLFGVGVCTVTDV  151 (204)
Q Consensus       104 ~~qi~K~~~pv~~~l~~~~~~~~~~s~~~~~sl~~i~~Gv~~~~~~d~  151 (204)
                      -.+.+-+-.+|.+++++++++|.|+++.+..+++....|+.+..+.|.
T Consensus       106 Si~lLDcwaip~v~~lsw~fLktrYrlmki~gV~iCi~GvvmvV~sDV  153 (336)
T KOG2766|consen  106 SIMLLDCWAIPCVLVLSWFFLKTRYRLMKISGVVICIVGVVMVVFSDV  153 (336)
T ss_pred             HHHHHHHhhhHHHHHHHHHHHHHHHhhheeeeEEeEecceEEEEEeee
Confidence            999999999999999999999999999999999999999999887763

>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []

Probab=95.48  E-value=0.22  Score=42.73  Aligned_cols=127  Identities=16%  Similarity=0.061  Sum_probs=89.6

Q ss_pred             HHHHHHHHHHHHHHHHhhhcCCCchhhHHHHHHHHHHHHHHHHHHh---CCc-cCCCC------CchhHHHHHHHHHHHH
Q 043019           21 FNVVTSVGIIMVNKALMATYGFSFATTLTGLHFATTTMLTTFLRWL---GYI-QTSHL------PFSELVRFVVFANFSI   90 (204)
Q Consensus        21 ~~~~~S~~~~~~NK~il~~~~f~~P~~Lt~~q~~~~~~~~~i~~~~---~~~-~~~~~------~~~~~~plsl~~~~~i   90 (204)
                      .+..+......+.|.++++++-+ |.-+.....+.+.+...+....   +.. +..+.      .+..++..++......
T Consensus       161 ~sl~~~a~~~~~qe~~~~~~~~~-~~~~mfy~n~~~~~~~~~~~~~l~~~~~~~~~~f~~~~p~~~~~l~~~s~~~~~g~  239 (303)
T PF08449_consen  161 LSLLLDAFTGVYQEKLFKKYGKS-PWELMFYTNLFSLPFLLILLFLLPTGEFRSAIRFISAHPSVLLYLLLFSLTGALGQ  239 (303)
T ss_pred             HHHHHHHHHHHHHHHHHHHhCCc-HHHHHHHHHHHHHHHHHHHHHHHHhhHhhHHHHHHHHhHHHHHHHHHHHHHHHHHH
Confidence            45577777778999999988877 7666666666666665543222   111 11111      1344555666666666


Q ss_pred             HHhhhhhccchHHHHHHHhhhhhHHHHHHHHHhcceecCcchhhhhhhhhhhheeeee
Q 043019           91 VGMNVSLMWNSVGFYQIAKLSMIPVSCFLEVVLDKVRYSRDTKLSILLVLFGVGVCTV  148 (204)
Q Consensus        91 ~~~n~sl~~~svs~~qi~K~~~pv~~~l~~~~~~~~~~s~~~~~sl~~i~~Gv~~~~~  148 (204)
                      .+-+...+..+--...+...+--+++++++.++++++.++..+.++.++..|..+..+
T Consensus       240 ~~i~~~~~~~~al~~t~v~t~Rk~~sillS~~~f~~~~~~~~~~G~~lv~~g~~~~~~  297 (303)
T PF08449_consen  240 FFIFYLIKKFSALTTTIVTTLRKFLSILLSVIIFGHPLSPLQWIGIVLVFAGIFLYSY  297 (303)
T ss_pred             HHHHHHHHhcCchhhhhHHHHHHHHHHHHHHHhcCCcCChHHHHHHHHhHHHHHHHHH
Confidence            6666667777777777888888999999999999999999999999999999876543

; GO: 0055085 transmembrane transport

>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]

Probab=95.46  E-value=0.25  Score=40.85  Aligned_cols=74  Identities=19%  Similarity=0.182  Sum_probs=62.0

Q ss_pred             chhHHHHHHHHH-HHHHHhhhhhccchHHHHHHHhhhhhHHHHHHHHHhcceecCcchhhhhhhhhhhheeeeec
Q 043019           76 FSELVRFVVFAN-FSIVGMNVSLMWNSVGFYQIAKLSMIPVSCFLEVVLDKVRYSRDTKLSILLVLFGVGVCTVT  149 (204)
Q Consensus        76 ~~~~~plsl~~~-~~i~~~n~sl~~~svs~~qi~K~~~pv~~~l~~~~~~~~~~s~~~~~sl~~i~~Gv~~~~~~  149 (204)
                      +......+++.. ....+-+.+++..+.+.........|++.++.++++++|+++..++.+..+++.|+.+....
T Consensus       214 ~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~l~~~e~~~~~~~~G~~li~~g~~l~~~~  288 (292)
T COG0697         214 WLLLLYLGVFSTGLAYLLWYYALRLLGASLVALLSLLEPVFAALLGVLLLGEPLSPAQLLGAALVVLGVLLASLR  288 (292)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHhcc
Confidence            344555555555 46778889999999999999999999999999999999999999999999999998776543

>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function

Probab=95.17  E-value=0.27  Score=43.30  Aligned_cols=139  Identities=12%  Similarity=0.151  Sum_probs=84.2

Q ss_pred             ccccchhHHHHHHHHHHHHHHHHHHHHHHhhhcCCCchhhH---HHHHHHHHHHHHHHHHHhCCccCCCCCc--hhHHH-
Q 043019            8 ADRKAATDVAAWMFNVVTSVGIIMVNKALMATYGFSFATTL---TGLHFATTTMLTTFLRWLGYIQTSHLPF--SELVR-   81 (204)
Q Consensus         8 ~~~~~~~~~~~w~~~~~~S~~~~~~NK~il~~~~f~~P~~L---t~~q~~~~~~~~~i~~~~~~~~~~~~~~--~~~~p-   81 (204)
                      +++.....+++-...+..+++-++ .|+...++  |-...+   ..+.++++.+.+.+..+-   +.++.+|  +.+.. 
T Consensus       163 ~~~~i~GDll~l~~a~lya~~nV~-~E~~v~~~--~~~~~lg~~Glfg~ii~~iq~~ile~~---~i~~~~w~~~~~~~~  236 (334)
T PF06027_consen  163 GSNPILGDLLALLGAILYAVSNVL-EEKLVKKA--PRVEFLGMLGLFGFIISGIQLAILERS---GIESIHWTSQVIGLL  236 (334)
T ss_pred             CCccchhHHHHHHHHHHHHHHHHH-HHHhcccC--CHHHHHHHHHHHHHHHHHHHHHheehh---hhhccCCChhhHHHH
Confidence            445555555555545555555544 55556542  322222   233344444433333222   2222332  22221 


Q ss_pred             --HHHHHHHHHHHhhhhhccchHHHHHHHhhhhhHHHHHHHHHhcceecCcchhhhhhhhhhhheeeeecccc
Q 043019           82 --FVVFANFSIVGMNVSLMWNSVGFYQIAKLSMIPVSCFLEVVLDKVRYSRDTKLSILLVLFGVGVCTVTDVS  152 (204)
Q Consensus        82 --lsl~~~~~i~~~n~sl~~~svs~~qi~K~~~pv~~~l~~~~~~~~~~s~~~~~sl~~i~~Gv~~~~~~d~~  152 (204)
                        .+++....-.+....++..+..+..+.-.++.+..++.+.+++|+++++.-..+.+++++|..+....|.+
T Consensus       237 v~~~~~lf~~y~l~p~~l~~ssAt~~nLsLLTsd~~ali~~i~~f~~~~~~ly~~af~lIiiG~vvy~~~~~~  309 (334)
T PF06027_consen  237 VGYALCLFLFYSLVPIVLRMSSATFFNLSLLTSDFYALIIDIFFFGYKFSWLYILAFALIIIGFVVYNLAESP  309 (334)
T ss_pred             HHHHHHHHHHHHHHHHHHHhCccceeehHHHHhhHHHHHHHHHhcCccccHHHHHHHHHHHHHhheEEccCCc
Confidence              12222222234466777888888888889999999999999999999999999999999999998877653

Some of the sequences in this family are annotated as putative membrane proteins.

>COG2962 RarD Predicted permeases [General function prediction only]

Probab=95.00  E-value=0.74  Score=39.62  Aligned_cols=137  Identities=18%  Similarity=0.059  Sum_probs=84.8

Q ss_pred             HHHHHHhhhcCCCchhhHHHHHHHHHHHHHHHHHHh-CCcc-CCCC--CchhHHHHHHHHHHHHHHhhhhhccchHHH--
Q 043019           31 MVNKALMATYGFSFATTLTGLHFATTTMLTTFLRWL-GYIQ-TSHL--PFSELVRFVVFANFSIVGMNVSLMWNSVGF--  104 (204)
Q Consensus        31 ~~NK~il~~~~f~~P~~Lt~~q~~~~~~~~~i~~~~-~~~~-~~~~--~~~~~~plsl~~~~~i~~~n~sl~~~svs~--  104 (204)
                      ++-|.+-.   .| |.-+...+...+..++.+.... |..+ .++.  +.|++  ..+..+.-...+|+.+--=.+.=  
T Consensus        24 ~y~kll~~---~~-~~eIlahRviwS~~~~l~ll~~~r~~~~~~~~~~~p~~~--~~~~l~a~li~~nW~lfiWAvn~g~   97 (293)
T COG2962          24 LYFKLLEP---LP-ATEILAHRVIWSFPFMLALLFLLRQWRELKQLLKQPKTL--LMLALTALLIGLNWWLFIWAVNNGH   97 (293)
T ss_pred             HHHHHHcc---CC-HHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhCcHHH--HHHHHHHHHHHHHHHHhheecCCCc
Confidence            45565543   35 6677777777777776663322 2111 1111  12222  22333333455565552212211  


Q ss_pred             ---HHHHhhhhhHHHHHHHHHhcceecCcchhhhhhhhhhhheeeeeccccccHHHHHHHHHHHHHHHHHHHHHHh
Q 043019          105 ---YQIAKLSMIPVSCFLEVVLDKVRYSRDTKLSILLVLFGVGVCTVTDVSVNAKGFIAAFVAVWSTAMQQYHVIL  177 (204)
Q Consensus       105 ---~qi~K~~~pv~~~l~~~~~~~~~~s~~~~~sl~~i~~Gv~~~~~~d~~~~~~G~~~~l~s~~~~a~~~i~~~~  177 (204)
                         ...--...|.+.++++.+++|||.|+.++.++.+-.+||..-...-.++++....++    ...++|-..-|+
T Consensus        98 ~leaSLGY~InPL~~VllG~lflkErls~~Q~iAV~lA~~GV~~~~~~~g~lpwval~la----~sf~~Ygl~RK~  169 (293)
T COG2962          98 VLEASLGYFINPLVNVLLGRLFLKERLSRLQWIAVGLAAAGVLIQTWLLGSLPWVALALA----LSFGLYGLLRKK  169 (293)
T ss_pred             hhHHHhHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHH----HHHHHHHHHHHh
Confidence               222234579999999999999999999999999999999998888888888666544    345666666554

>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function

Probab=94.96  E-value=0.062  Score=46.53  Aligned_cols=71  Identities=10%  Similarity=0.059  Sum_probs=61.8

Q ss_pred             hhHHHHHH-HHHHHHHHhhhhhccchHHHHHHHhhhhhHHHHHHHHHhcceecCcchhhhhhhhhhhheeee
Q 043019           77 SELVRFVV-FANFSIVGMNVSLMWNSVGFYQIAKLSMIPVSCFLEVVLDKVRYSRDTKLSILLVLFGVGVCT  147 (204)
Q Consensus        77 ~~~~plsl-~~~~~i~~~n~sl~~~svs~~qi~K~~~pv~~~l~~~~~~~~~~s~~~~~sl~~i~~Gv~~~~  147 (204)
                      ++.+..|+ .++.+-.++-.|+.+.|.+..|-+-+...++.++++..++|||.+++.+.+..+++.|..+..
T Consensus        50 ~~~W~~G~~~~~~g~~~~~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~~~~~~~G~~l~i~G~~liv  121 (300)
T PF05653_consen   50 RPLWWIGLLLMVLGEILNFVALGFAPASLVAPLGALSLVFNAVLARFFLGEKLTRRDIVGCALIILGSVLIV  121 (300)
T ss_pred             hHHHHHHHHHHhcchHHHHHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcccchHhHHhhHHHHHhhheeeE
Confidence            34555554 556677788899999999999999999999999999999999999999999999999987644

>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein

Probab=94.91  E-value=0.3  Score=41.87  Aligned_cols=67  Identities=7%  Similarity=-0.046  Sum_probs=55.5

Q ss_pred             HHHHHHHHHHHHhhhhhc-cchHHHHHHHhhhhhHHHHHHHHHhcceecCcchh----hhhhhhhhhheeee
Q 043019           81 RFVVFANFSIVGMNVSLM-WNSVGFYQIAKLSMIPVSCFLEVVLDKVRYSRDTK----LSILLVLFGVGVCT  147 (204)
Q Consensus        81 plsl~~~~~i~~~n~sl~-~~svs~~qi~K~~~pv~~~l~~~~~~~~~~s~~~~----~sl~~i~~Gv~~~~  147 (204)
                      ..+++......+-..+.+ +++.+...++=...|+...+.+++++||+.+++++    ...+++++|+.+..
T Consensus       216 ~~Gi~~~ia~~~y~~~~~~~~~~~~~~~ls~~~pvia~~~~v~~l~E~~~~~~~~~~~iG~~lIi~~~~l~~  287 (290)
T TIGR00776       216 LPGLMWGIGNFFYLFSAQPKVGVATSFSLSQLGVIISTLGGILILGEKKTKREMIAISVGIILIIIAANILG  287 (290)
T ss_pred             HHHHHHHHHHHHHHHHcccccchhhHHHHHHHHHHHHHHHHHHHhccCCCcceeehhHHHHHHHHHHHHHHh
Confidence            355555554445556778 99999999999999999999999999999999999    88888888887653

These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.

>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function

Probab=94.56  E-value=0.082  Score=39.29  Aligned_cols=70  Identities=19%  Similarity=0.171  Sum_probs=57.7

Q ss_pred             chhHHHHHHHHHHHHHHhhhhhccchHHHHHHH-hhhhhHHHHHHHHHhcceecCcchhhhhhhhhhhheee
Q 043019           76 FSELVRFVVFANFSIVGMNVSLMWNSVGFYQIA-KLSMIPVSCFLEVVLDKVRYSRDTKLSILLVLFGVGVC  146 (204)
Q Consensus        76 ~~~~~plsl~~~~~i~~~n~sl~~~svs~~qi~-K~~~pv~~~l~~~~~~~~~~s~~~~~sl~~i~~Gv~~~  146 (204)
                      ++-.+|..+-.++++.+ ...+...++|....+ -+++-++|++.++++++|..+++++..+.+++.|+.+.
T Consensus        42 ~~y~ipf~lNq~GSv~f-~~~L~~~dlSlavPi~Nsl~fvfT~l~g~~lge~~~~~~~~~G~~Li~~Gv~Lc  112 (113)
T PF10639_consen   42 PKYIIPFLLNQSGSVLF-FLLLGSADLSLAVPIANSLAFVFTALTGWLLGEEVISRRTWLGMALILAGVALC  112 (113)
T ss_pred             HHHHHHHHHHHHHHHHH-HHHHhcCCceeeehHHhHHHHHHHHHHHHHhcCcccchhHHHHHHHHHcCeeee
Confidence            46677888777766554 456777788877766 48899999999999999999999999999999999875

Many members are annotated as potential transmembrane proteins.

>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long

Probab=91.88  E-value=0.49  Score=40.42  Aligned_cols=97  Identities=14%  Similarity=0.086  Sum_probs=72.8

Q ss_pred             HHHHHHHHHHHHhhhhhccchHHHHHHH-hhhhhHHHHHHHHHhcceecCcchh----hhhhhhhhhheeeeecccccc-
Q 043019           81 RFVVFANFSIVGMNVSLMWNSVGFYQIA-KLSMIPVSCFLEVVLDKVRYSRDTK----LSILLVLFGVGVCTVTDVSVN-  154 (204)
Q Consensus        81 plsl~~~~~i~~~n~sl~~~svs~~qi~-K~~~pv~~~l~~~~~~~~~~s~~~~----~sl~~i~~Gv~~~~~~d~~~~-  154 (204)
                      .-+++.+..-...-.|+++..||-.--+ -....+.+.+.++++++|..+...+    .+++++++|+.+.++.|.+-+ 
T Consensus        50 lsG~~W~iGq~~qf~s~~~~GVS~tmPiStg~QLvg~sl~gv~~fgEW~~~~~~~~G~~Al~liiiGv~lts~~~~~~~~  129 (269)
T PF06800_consen   50 LSGAFWAIGQIGQFKSFKKIGVSKTMPISTGLQLVGTSLIGVLFFGEWTTTTQKIIGFLALVLIIIGVILTSYQDKKSDK  129 (269)
T ss_pred             HHHHHHHHHHHHHHHHHHHhcceeeeccchhHHHHHHHHHHHhhcCCCCCcchHHHHHHHHHHHHHHHHHhccccccccc
Confidence            3456777777777777777655533222 2455677999999999998766654    489999999999998875432 


Q ss_pred             -------HHHHHHHHHHHHHHHHHHHHHHh
Q 043019          155 -------AKGFIAAFVAVWSTAMQQYHVIL  177 (204)
Q Consensus       155 -------~~G~~~~l~s~~~~a~~~i~~~~  177 (204)
                             .-|+...+.+.+.+..|.+..|-
T Consensus       130 ~~~~~~~~kgi~~Ll~stigy~~Y~~~~~~  159 (269)
T PF06800_consen  130 SSSKSNMKKGILALLISTIGYWIYSVIPKA  159 (269)
T ss_pred             cccccchhhHHHHHHHHHHHHHHHHHHHHh
Confidence                   45999999999999999998654

Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane

>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]

Probab=91.85  E-value=0.25  Score=41.82  Aligned_cols=71  Identities=8%  Similarity=-0.039  Sum_probs=57.9

Q ss_pred             hhHHHHHHHHH-----HHHHHhhhhhccchHHHHHHHhhhhhHHHHHHHHHhcceecCcchhhhhhhhhhhheeee
Q 043019           77 SELVRFVVFAN-----FSIVGMNVSLMWNSVGFYQIAKLSMIPVSCFLEVVLDKVRYSRDTKLSILLVLFGVGVCT  147 (204)
Q Consensus        77 ~~~~plsl~~~-----~~i~~~n~sl~~~svs~~qi~K~~~pv~~~l~~~~~~~~~~s~~~~~sl~~i~~Gv~~~~  147 (204)
                      ..++|.++.-.     +-..+...+++..|-+.+.++-+..|.+-.+.+.++++|+.|..+|+++..++.+.+=.+
T Consensus       206 p~ll~laLgvavlSSalPYsLEmiAL~rlp~~~F~~LlSLePa~aAl~G~i~L~e~ls~~qwlaI~~ViaAsaG~~  281 (292)
T COG5006         206 PSLLPLALGVAVLSSALPYSLEMIALRRLPARTFGTLLSLEPALAALSGLIFLGETLTLIQWLAIAAVIAASAGST  281 (292)
T ss_pred             hHHHHHHHHHHHHhcccchHHHHHHHhhCChhHHHHHHHhhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhccc
Confidence            44556555332     223467789999999999999999999999999999999999999999999988776443

>TIGR00803 nst UDP-galactose transporter

Probab=89.75  E-value=7.1  Score=31.64  Aligned_cols=65  Identities=12%  Similarity=0.004  Sum_probs=56.1

Q ss_pred             HHHHHHHHHHHHhhhhhccchHHHHHHHhhhhhHHHHHHHHHhcceecCcchhhhhhhhhhhhee
Q 043019           81 RFVVFANFSIVGMNVSLMWNSVGFYQIAKLSMIPVSCFLEVVLDKVRYSRDTKLSILLVLFGVGV  145 (204)
Q Consensus        81 plsl~~~~~i~~~n~sl~~~svs~~qi~K~~~pv~~~l~~~~~~~~~~s~~~~~sl~~i~~Gv~~  145 (204)
                      -+.+..++.-.+-+..+++.+-.+..+.-...++++.++++++++++++...+.+..++..|+.+
T Consensus       157 ~~~~~~a~~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~~~~~g~~lV~~~~~l  221 (222)
T TIGR00803       157 IVGLLNVGGGLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISSTFYLGAILVFLATFL  221 (222)
T ss_pred             HHHHHHHhcCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHeeeEe
Confidence            34455555656778889999999999999999999999999999999999999999999988764

NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.

>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long

Probab=84.83  E-value=24  Score=30.20  Aligned_cols=68  Identities=10%  Similarity=0.025  Sum_probs=51.2

Q ss_pred             hhHHHHHHHHHHHHHHhhhhhccchHHHHHHHhhhhhHHHHHHHHHhcceecCcchh----hhhhhhhhhhe
Q 043019           77 SELVRFVVFANFSIVGMNVSLMWNSVGFYQIAKLSMIPVSCFLEVVLDKVRYSRDTK----LSILLVLFGVG  144 (204)
Q Consensus        77 ~~~~plsl~~~~~i~~~n~sl~~~svs~~qi~K~~~pv~~~l~~~~~~~~~~s~~~~----~sl~~i~~Gv~  144 (204)
                      ++-+.-++.+...-.+.-.|-+.+-++..-.+--+.++...+.+.+++||+-++++.    ..++++++|..
T Consensus       196 ~~nil~G~~w~ignl~~~is~~~~G~a~af~lSQ~~vvIStlgGI~il~E~Kt~ke~~~~~~G~~Liv~G~i  267 (269)
T PF06800_consen  196 WKNILTGLIWGIGNLFYLISAQKNGVATAFTLSQLGVVISTLGGIFILKEKKTKKEMIYTLIGLILIVIGAI  267 (269)
T ss_pred             HHhhHHHHHHHHHHHHHHHhHHhccchhhhhHHhHHHHHHHhhhheEEEecCchhhHHHHHHHHHHHHHhhh
Confidence            344556777777767777788888888888888888999999999999998777654    45555555544

Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane

>COG2962 RarD Predicted permeases [General function prediction only]

Probab=84.57  E-value=21  Score=30.88  Aligned_cols=70  Identities=7%  Similarity=0.113  Sum_probs=60.2

Q ss_pred             HHHHHHHHHHHHHHhhhhhccchHHHHHHHhhhhhHHHHHHHHHhcceecCcchhhhhhhhhhhheeeee
Q 043019           79 LVRFVVFANFSIVGMNVSLMWNSVGFYQIAKLSMIPVSCFLEVVLDKVRYSRDTKLSILLVLFGVGVCTV  148 (204)
Q Consensus        79 ~~plsl~~~~~i~~~n~sl~~~svs~~qi~K~~~pv~~~l~~~~~~~~~~s~~~~~sl~~i~~Gv~~~~~  148 (204)
                      +...|...+.-..+-..+-+..|.++...+....|....+.+.++++|.++..++.+-.++-.|.++.+.
T Consensus       214 Lv~aG~vTavpL~lf~~aa~~lpls~~G~lqYi~Ptl~fllav~i~~E~~~~~~~~~F~~IW~aL~l~~~  283 (293)
T COG2962         214 LVLAGLVTAVPLLLFAAAAKRLPLSTLGFLQYIEPTLMFLLAVLIFGEPFDSDQLVTFAFIWLALALFSI  283 (293)
T ss_pred             HHHhhHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHH
Confidence            4445677777778888899999999999999999999999999999999999999888888777766543

>KOG2922 consensus Uncharacterized conserved protein [Function unknown]

Probab=80.65  E-value=2.3  Score=37.25  Aligned_cols=71  Identities=10%  Similarity=0.017  Sum_probs=61.1

Q ss_pred             hHHHHHH-HHHHHHHHhhhhhccchHHHHHHHhhhhhHHHHHHHHHhcceecCcchhhhhhhhhhhheeeee
Q 043019           78 ELVRFVV-FANFSIVGMNVSLMWNSVGFYQIAKLSMIPVSCFLEVVLDKVRYSRDTKLSILLVLFGVGVCTV  148 (204)
Q Consensus        78 ~~~plsl-~~~~~i~~~n~sl~~~svs~~qi~K~~~pv~~~l~~~~~~~~~~s~~~~~sl~~i~~Gv~~~~~  148 (204)
                      +++..|+ .+..+=..+-.|+.+.|.+..+-+-+.+.+..++++..+++||.++.-.+++.+.++|-.+-..
T Consensus        65 ~~Ww~G~ltm~vGei~NFaAYaFAPasLVtPLGAlsvi~saila~~~L~Ekl~~~g~lGc~l~v~Gst~iV~  136 (335)
T KOG2922|consen   65 PLWWAGMLTMIVGEIANFAAYAFAPASLVTPLGALSVIISAILASFFLKEKLNLLGILGCVLCVVGSTTIVI  136 (335)
T ss_pred             HHHHHHHHHHHHHhHhhHHHHhhchHhhhccchhHHHHHHHHHHHHHHHHHHHHhhhhheeEEecccEEEEE
Confidence            3445554 5666677888999999999999999999999999999999999999999999999999766554

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	204
3b5d_A	110	Multidrug transporter EMRE; helical membrane prote	97.97
2i68_A	137	Protein EMRE; transmembrane protein, small-multidr	97.79

>3b5d_A Multidrug transporter EMRE; helical membrane protein, multidrug resistance transporter, SMR, antiport, inner membrane, transmembrane; HET: P4P; 3.80A {Escherichia coli K12} PDB: 3b61_A 3b62_A*

Probab=97.97  E-value=2.3e-05  Score=56.88  Aligned_cols=68  Identities=13%  Similarity=0.077  Sum_probs=60.9

Q ss_pred             HHHHHHHHHHhhhhhccchHHHHHHH-hhhhhHHHHHHHHHhcceecCcchhhhhhhhhhhheeeeecc
Q 043019           83 VVFANFSIVGMNVSLMWNSVGFYQIA-KLSMIPVSCFLEVVLDKVRYSRDTKLSILLVLFGVGVCTVTD  150 (204)
Q Consensus        83 sl~~~~~i~~~n~sl~~~svs~~qi~-K~~~pv~~~l~~~~~~~~~~s~~~~~sl~~i~~Gv~~~~~~d  150 (204)
                      .+.+.....+-+.++++.|++....+ +...|+++.+.+++++||+.++.++..+.++++|+.+....+
T Consensus        37 ~~~~~~~~~~~~~al~~~p~s~ay~i~~g~~~v~~~l~~~~~~~E~~s~~~~~Gi~lIi~Gv~~l~~~~  105 (110)
T 3b5d_A           37 IICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLLS  105 (110)
T ss_pred             HHHHHHHHHHHHHHHHhCChhhHHHHHhhHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcCC
Confidence            34667778888899999999999888 999999999999999999999999999999999998765544

>2i68_A Protein EMRE; transmembrane protein, small-multidrug resistance, transporter, homodimer, dual topology, transport protein; NMR {Escherichia coli}

Probab=97.79  E-value=3.1e-05  Score=58.46  Aligned_cols=68  Identities=13%  Similarity=0.064  Sum_probs=49.4

Q ss_pred             HHHHHHHHHHHhhhhhccchHHHHHHH-hhhhhHHHHHHHHHhcceecCcchhhhhhhhhhhheeeeec
Q 043019           82 FVVFANFSIVGMNVSLMWNSVGFYQIA-KLSMIPVSCFLEVVLDKVRYSRDTKLSILLVLFGVGVCTVT  149 (204)
Q Consensus        82 lsl~~~~~i~~~n~sl~~~svs~~qi~-K~~~pv~~~l~~~~~~~~~~s~~~~~sl~~i~~Gv~~~~~~  149 (204)
                      ..+++.+...+-+.++++.|++....+ ....|++++++++++++|+.++.++.++.++++|+.+....
T Consensus        36 ~i~~~~ls~~l~~~alk~i~~s~ay~iw~~l~pv~~~l~g~l~lgE~ls~~~~~Gi~LIi~GV~ll~~~  104 (137)
T 2i68_A           36 TIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLL  104 (137)
T ss_dssp             HHHHHHHHHHHHHHHHC-----CHHHHHHHHHHHHHHHHHHHHHC------CHHHHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcC
Confidence            334677788899999999999987777 99999999999999999999999999999999999876543

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00