Citrus Sinensis ID: 043031

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420----
LSLVDIIRAAITRYLQFSLHGRPDLFCLDHFCGNSPTGFPEGGIKGVELVHLLLLSAEKIGSQQFDRASIFLDHVDKYSSTTGNPVQRLVHYFSKALRERFNLETGRITSKGLKSEEVMLLLHPEEVMASAKQALIACYQKVPFYQVTVFAGIQAVIENVSSAKKIHIIDLATRTGSHCPAIMQALATRQGCPPELLKITMVVGTTPSKQKFEEIENRLANFAETINLPFPFNISFLTDIKDFETNEGEVVAVYSPVHLSHMIRKPNCLETFLTELRKINPCVMVVIEVESNDNLQTFEDRFFGTLFHFGALFDCLEVCMNRCHANRMTFEEMYAGQHIRNIIASEGEERIFGHMKIDGWRDLFNRFGLVEAELSSWSLFQAELILRSFACGSSCTIDRNGECLIIGWKGIPHLSLSVWKFHRE
ccHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccHHHHHHHHHHHHHcccHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHccccccccccccccHHHHHccccHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHcccccEEEEEcccccccccHHHHHHHHHccccccccEEEEEEccccccHHHHHHHHHHHHHHHHHcccccEEEEEEcccccccccccccEEEEEcccccccccccccHHHHHHHHHHHHcccEEEEEEEccccccccHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHcccccccccccHHHHHHHHHHHHccccccEEEEEcccEEEEEEcccEEEEEEEcccccc
ccHEEEcccccccEEEEccccccccHHHHcccccccccccccccccHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHcccccHHHHcccccccccccccHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHccccEEEEEEcccccccHHHHHHHHHHccccccccEEEEEcccccccccHHHHHHHHHHHHHHHHccccEEEEEEEEEcHHHcccccccEEEEEHHHHHHcccccccHHHHHHHHHHHccccEEEEEEEEcccccHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHEcccHHHcccHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHccccccEEEEEcccEEEEcccccEEEEEEccccccc
LSLVDIIRAAITRYLQFslhgrpdlfcldhfcgnsptgfpeggiKGVELVHLLLLSAEKigsqqfdrasifldhvdkyssttgnpvQRLVHYFSKALRERFNletgritskglkSEEVMLLLHPEEVMASAKQALIACYQKVPFYQVTVFAGIQAVIENVSSAKKIHIIDlatrtgshcPAIMQALAtrqgcppellKITMVVGTTPSKQKFEEIENRLANfaetinlpfpfnisflTDIKdfetnegevvavyspvhlshmirkpncLETFLTELRKINPCVMVVIEVEsndnlqtfedrffgtlfhfGALFDCLEVCMNRCHANRMTFEEMYAGQHIRNIIASEGEERIFGHMKIDGWRDLFNRFGLVEAELSSWSLFQAELILRSFacgssctidrngecliigwkgiphlsLSVWKFHRE
LSLVDIIRAAITRYLQFSLHGRPDLFCLDHFCGNSPTGFPEGGIKGVELVHLLLLSAEKIGSQQFDRASIFLDHVDKyssttgnpvqRLVHYFSKALRERfnletgritskglkSEEVMLLLHPEEVMASAKQALIACYQKVPFYQVTVFAGIQAVIENVSSAKKIHIIDLATRTGSHCPAIMQALATRQGCPPELLKITMVVGTTPSKQKFEEIENRLANFAETINLPFPFNISFLTDIKDFETNEGEVVAVYSpvhlshmirKPNCLETFLTELRKINPCVMVVIEVESNDNLQTFEDRFFGTLFHFGALFDCLEVCMNRCHANRMTFEEMYAGQHIRNIIASEGEERIFGHMKIDGWRDLFNRFGLVEAELSSWSLFQAELILRSFACGSSCTIDRNGECLIIgwkgiphlslsvwkfhre
LSLVDIIRAAITRYLQFSLHGRPDLFCLDHFCGNSPTGFPEGGIKGVELVHLLLLSAEKIGSQQFDRASIFLDHVDKYSSTTGNPVQRLVHYFSKALRERFNLETGRITSKGLKSEEVMLLLHPEEVMASAKQALIACYQKVPFYQVTVFAGIQAVIENVSSAKKIHIIDLATRTGSHCPAIMQALATRQGCPPELLKITMVVGTTPSKQKFEEIENRLANFAETINLPFPFNISFLTDIKDFETNEGEVVAVYSPVHLSHMIRKPNCLETFLTELRKINPCVMVVIEVESNDNLQTFEDRFFGTLFHFGALFDCLEVCMNRCHANRMTFEEMYAGQHIRNIIASEGEERIFGHMKIDGWRDLFNRFGLVEAELSSWSLFQAELILRSFACGSSCTIDRNGECLIIGWKGIPHLSLSVWKFHRE
**LVDIIRAAITRYLQFSLHGRPDLFCLDHFCGNSPTGFPEGGIKGVELVHLLLLSAEKIGSQQFDRASIFLDHVDKYSSTTGNPVQRLVHYFSKALRERFNLETGRITSKGLKSEEVMLLLHPEEVMASAKQALIACYQKVPFYQVTVFAGIQAVIENVSSAKKIHIIDLATRTGSHCPAIMQALATRQGCPPELLKITMVVGTTPSKQKFEEIENRLANFAETINLPFPFNISFLTDIKDFETNEGEVVAVYSPVHLSHMIRKPNCLETFLTELRKINPCVMVVIEVESNDNLQTFEDRFFGTLFHFGALFDCLEVCMNRCHANRMTFEEMYAGQHIRNIIASEGEERIFGHMKIDGWRDLFNRFGLVEAELSSWSLFQAELILRSFACGSSCTIDRNGECLIIGWKGIPHLSLSVWKF***
*SLVDIIRAAITRY************************************HLLLLSAEKIGSQQFDRASIFLDHVDKYSSTTGNPVQRLVHYFSKALRERFNLETGRITSKGLK**********EEVMASAKQALIACYQKVPFYQVTVFAGIQAVIENVSSAKKIHIIDLATRTGSHCPAIMQA***********LKITMVVGTTPSKQKFEEIENRLANFAETINLPFPFNISFLTDIKDFETNEGEVVAVYSPVHLSHMIRKPNCLETFLTELRKINPCVMVVIEVESNDNLQTFEDRFFGTLFHFGALFDCLEVCMNRCHANRMTFEEMYAGQHIRNIIASEGEERIFGHMKIDGWRDLFNRFGLVEAELSSWSLFQAELILRSFACGSSCTIDRNGECLIIGWKGIPHLSLSVWKFHR*
LSLVDIIRAAITRYLQFSLHGRPDLFCLDHFCGNSPTGFPEGGIKGVELVHLLLLSAEKIGSQQFDRASIFLDHVDKYSSTTGNPVQRLVHYFSKALRERFNLETGRITSKGLKSEEVMLLLHPEEVMASAKQALIACYQKVPFYQVTVFAGIQAVIENVSSAKKIHIIDLATRTGSHCPAIMQALATRQGCPPELLKITMVVGTTPSKQKFEEIENRLANFAETINLPFPFNISFLTDIKDFETNEGEVVAVYSPVHLSHMIRKPNCLETFLTELRKINPCVMVVIEVESNDNLQTFEDRFFGTLFHFGALFDCLEVCMNRCHANRMTFEEMYAGQHIRNIIASEGEERIFGHMKIDGWRDLFNRFGLVEAELSSWSLFQAELILRSFACGSSCTIDRNGECLIIGWKGIPHLSLSVWKFHRE
LSLVDIIRAAITRYLQFSLHGRPDLFCLDHFCGN*********IKGVELVHLLLLSAEKIGSQQFDRASIFLDHVDKYSSTTGNPVQRLVHYFSKALRERFNLETGRITSKGLKSEEVMLLLHPEEVMASAKQALIACYQKVPFYQVTVFAGIQAVIENVSSAKKIHIIDLATRTGSHCPAIMQALATRQGCPPELLKITMVVGTTPSKQKFEEIENRLANFAETINLPFPFNISFLTDIKDFETNEGEVVAVYSPVHLSHMIRKPNCLETFLTELRKINPCVMVVIEVESNDNLQTFEDRFFGTLFHFGALFDCLEVCMNRCHANRMTFEEMYAGQHIRNIIASEGEERIFGHMKIDGWRDLFNRFGLVEAELSSWSLFQAELILRSFACGSSCTIDRNGECLIIGWKGIPHLSLSVWKFH**
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
LSLVDIIRAAITRYLQFSLHGRPDLFCLDHFCGNSPTGFPEGGIKGVELVHLLLLSAEKIGSQQFDRASIFLDHVDKYSSTTGNPVQRLVHYFSKALRERFNLETGRITSKGLKSEEVMLLLHPEEVMASAKQALIACYQKVPFYQVTVFAGIQAVIENVSSAKKIHIIDLATRTGSHCPAIMQALATRQGCPPELLKITMVVGTTPSKQKFEEIENRLANFAETINLPFPFNISFLTDIKDFETNEGEVVAVYSPVHLSHMIRKPNCLETFLTELRKINPCVMVVIEVESNDNLQTFEDRFFGTLFHFGALFDCLEVCMNRCHANRMTFEEMYAGQHIRNIIASEGEERIFGHMKIDGWRDLFNRFGLVEAELSSWSLFQAELILRSFACGSSCTIDRNGECLIIGWKGIPHLSLSVWKFHRE
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query424 2.2.26 [Sep-21-2011]
Q8GXW1547 DELLA protein RGL2 OS=Ara yes no 0.849 0.658 0.295 2e-44
Q8S4W7590 DELLA protein GAI1 OS=Vit no no 0.844 0.606 0.273 2e-44
Q9C8Y3511 DELLA protein RGL1 OS=Ara no no 0.830 0.688 0.284 5e-43
Q7Y1B6588 DELLA protein GAI OS=Sola N/A no 0.841 0.607 0.275 1e-42
Q84TQ7537 DELLA protein GAI OS=Goss N/A no 0.837 0.661 0.285 2e-42
Q9ST48630 DELLA protein DWARF8 OS=Z N/A no 0.849 0.571 0.278 1e-41
Q9SLH3587 DELLA protein RGA OS=Arab no no 0.844 0.609 0.275 3e-41
Q7G7J6625 DELLA protein SLR1 OS=Ory yes no 0.849 0.576 0.273 1e-40
Q9LF53523 DELLA protein RGL3 OS=Ara no no 0.844 0.684 0.286 9e-40
Q8W127618 DELLA protein SLN1 OS=Hor N/A no 0.851 0.584 0.267 3e-39
>sp|Q8GXW1|RGL2_ARATH DELLA protein RGL2 OS=Arabidopsis thaliana GN=RGL2 PE=1 SV=2 Back     alignment and function desciption
 Score =  180 bits (456), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 114/386 (29%), Positives = 186/386 (48%), Gaps = 26/386 (6%)

Query: 46  GVELVHLLLLSAEKIGSQQFDRASIFLDHVDKYSSTTGNPVQRLVHYFSKALRER----F 101
           GV LVH L+  AE I  +  + A   +  V   + +    + ++  YF++AL  R    +
Sbjct: 177 GVRLVHALVACAEAIHQENLNLADALVKRVGTLAGSQAGAMGKVATYFAQALARRIYRDY 236

Query: 102 NLETGRITSKGLKSEEVMLLLHPEEVMASAKQALIACYQKVPFYQVTVFAGIQAVIENVS 161
             ET    +     EEV L +H               Y+  P+ +   F   QA++E V+
Sbjct: 237 TAETDVCAAVNPSFEEV-LEMH--------------FYESCPYLKFAHFTANQAILEAVT 281

Query: 162 SAKKIHIIDLATRTGSHCPAIMQALATRQGCPPELLKITMVVGTTPSKQKFEEIENRLAN 221
           +A+++H+IDL    G   PA+MQALA R G PP      +    T +    +++  +LA 
Sbjct: 282 TARRVHVIDLGLNQGMQWPALMQALALRPGGPPSFRLTGIGPPQTENSDSLQQLGWKLAQ 341

Query: 222 FAETINLPFPFN---ISFLTDIKD--FETN-EGEVVAVYSPVHLSHMIRKPNCLETFLTE 275
           FA+ + + F F       L+D++   FET  E E + V S   L  ++ +   +E  L  
Sbjct: 342 FAQNMGVEFEFKGLAAESLSDLEPEMFETRPESETLVVNSVFELHRLLARSGSIEKLLNT 401

Query: 276 LRKINPCVMVVIEVESNDNLQTFEDRFFGTLFHFGALFDCLEVCMNRCHANRMTFEEMYA 335
           ++ I P ++ V+E E+N N   F DRF   L ++ +LFD LE   +    +R+   E+Y 
Sbjct: 402 VKAIKPSIVTVVEQEANHNGIVFLDRFNEALHYYSSLFDSLEDSYSLPSQDRV-MSEVYL 460

Query: 336 GQHIRNIIASEGEERIFGHMKIDGWRDLFNRFGLVEAELSSWSLFQAELILRSFACGSSC 395
           G+ I N++A+EG +R+  H     WR      G     L S +  QA ++L  +A G   
Sbjct: 461 GRQILNVVAAEGSDRVERHETAAQWRIRMKSAGFDPIHLGSSAFKQASMLLSLYATGDGY 520

Query: 396 TIDRNGECLIIGWKGIPHLSLSVWKF 421
            ++ N  CL+IGW+  P ++ S WK 
Sbjct: 521 RVEENDGCLMIGWQTRPLITTSAWKL 546
Probable transcriptional regulator that acts as a repressor of the gibberellin (GA) signaling pathway. Probably acts by participating in large multiprotein complexes that repress transcription of GA-inducible genes. Upon GA application, it is degraded by the proteasome, allowing the GA signaling pathway. Acts as a major GA-response repressor of seed germination, including seed thermoinhibition. Promotes the biosynthesis of abscisic acid (ABA), especially in seed coats to maintain seed dormancy. Delays flowering and adult leaf production. Also regulates the floral development, petal, stamen and anther development, by repressing the continued growth of floral organs. Its activity is probably regulated by other phytohormones such as auxin and ethylene. Involved in the regulation of seed dormancy and germination, including glucose-induced delay of seed germination. Promotes salt tolerance. Act as a repressor of positive regulators of trichome initiation. Required during the flagellin-derived peptide flg22-mediated growth inhibition. Contributes to the susceptibility to the biotrophic pathogen P.syringae pv. tomato and to the resistance to the necrotrophic pathogens B.cinerea A.brassicicola, probably by repressing the SA-defense pathway and preventing cell death. Prevents stress-induced reactive oxygen species (ROS) accumulation (e.g. salt stress) by acting on the ROS scavenging system, and delays ROS-induced cell death, thus promoting stress tolerance.
Arabidopsis thaliana (taxid: 3702)
>sp|Q8S4W7|GAI1_VITVI DELLA protein GAI1 OS=Vitis vinifera GN=GAI1 PE=2 SV=1 Back     alignment and function description
>sp|Q9C8Y3|RGL1_ARATH DELLA protein RGL1 OS=Arabidopsis thaliana GN=RGL1 PE=1 SV=1 Back     alignment and function description
>sp|Q7Y1B6|GAI_SOLLC DELLA protein GAI OS=Solanum lycopersicum GN=GAI PE=2 SV=1 Back     alignment and function description
>sp|Q84TQ7|GAI_GOSHI DELLA protein GAI OS=Gossypium hirsutum GN=GAI PE=2 SV=1 Back     alignment and function description
>sp|Q9ST48|DWRF8_MAIZE DELLA protein DWARF8 OS=Zea mays GN=D8 PE=1 SV=1 Back     alignment and function description
>sp|Q9SLH3|RGA_ARATH DELLA protein RGA OS=Arabidopsis thaliana GN=RGA PE=1 SV=1 Back     alignment and function description
>sp|Q7G7J6|SLR1_ORYSJ DELLA protein SLR1 OS=Oryza sativa subsp. japonica GN=SLR1 PE=1 SV=1 Back     alignment and function description
>sp|Q9LF53|RGL3_ARATH DELLA protein RGL3 OS=Arabidopsis thaliana GN=RGL3 PE=1 SV=1 Back     alignment and function description
>sp|Q8W127|SLN1_HORVU DELLA protein SLN1 OS=Hordeum vulgare GN=SLN1 PE=1 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query424
224111946489 GRAS family transcription factor [Populu 0.974 0.844 0.471 1e-105
224111944446 GRAS family transcription factor [Populu 0.988 0.939 0.494 1e-105
255556358 562 DELLA protein RGL1, putative [Ricinus co 0.971 0.733 0.471 1e-100
357448957 587 DELLA protein GAI [Medicago truncatula] 0.992 0.717 0.449 1e-100
224111952 588 GRAS family transcription factor [Populu 0.900 0.649 0.489 3e-99
255564942 594 DELLA protein GAI1, putative [Ricinus co 0.964 0.688 0.454 1e-98
224111950 561 GRAS family transcription factor [Populu 0.978 0.739 0.463 4e-98
124359966507 GRAS transcription factor [Medicago trun 0.985 0.824 0.461 1e-96
356556012 593 PREDICTED: DELLA protein RGL2-like [Glyc 0.983 0.703 0.454 1e-96
357448963 577 DELLA protein GAI [Medicago truncatula] 0.985 0.724 0.461 2e-96
>gi|224111946|ref|XP_002316031.1| GRAS family transcription factor [Populus trichocarpa] gi|222865071|gb|EEF02202.1| GRAS family transcription factor [Populus trichocarpa] Back     alignment and taxonomy information
 Score =  389 bits (998), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 201/426 (47%), Positives = 269/426 (63%), Gaps = 13/426 (3%)

Query: 1   LSLVDIIRAAITRYLQFSLHGRPDLFCLDHFCGNSPTGFPEGGIKGVELVHLLLLSAEKI 60
           LS  +II+ A    L++ L    +L  L   C  +P      G+K VEL+  L+ +AEK+
Sbjct: 71  LSTEEIIKVATETSLEYHLQRSDNLSSLSFGC--APFVLTSDGVKYVELIQFLIAAAEKV 128

Query: 61  GSQQFDRASIFLDHVDKYSSTTGNPVQRLVHYFSKALRERFNLETGRITSKGLKSEEVML 120
           G QQFD  S  L   D+ SS TGNPVQR+V+YF+ ALRER + ETG+IT +GL      +
Sbjct: 129 GQQQFDHVSEMLSMCDQMSSATGNPVQRIVYYFTGALRERIDRETGKITPRGL----FTI 184

Query: 121 LLHPEEVMASAKQALIACYQKVPFYQVTVFAGIQAVIENVSSAKKIHIIDLATRTGSHCP 180
             + EE M S   A++ C+Q++PF Q+    GIQA++ + + AK++H+IDL   +G    
Sbjct: 185 SSNVEEAMVSLSPAILECHQRMPFCQIAQLTGIQAIVVSAADAKRLHVIDLKIDSGVQWI 244

Query: 181 AIMQALATRQGCPPELLKITMVVGTTPSKQKFEEIENRLANFAETINLPFPFNISFLTDI 240
           A+MQALA R  CP ELLKIT   GTT S  K +E   RLA FAET+NLPF FN+  + +I
Sbjct: 245 ALMQALAARNDCPTELLKIT-AFGTT-SMSKIQETGKRLAQFAETVNLPFSFNLVMVLNI 302

Query: 241 KD-----FETNEGEVVAVYSPVHLSHMIRKPNCLETFLTELRKINPCVMVVIEVESNDNL 295
            D     F+   GE +AVYS + L +++  PNCLE  +  +R + P +MV+ E E+N N 
Sbjct: 303 NDLKKESFDIEAGEFIAVYSSLFLKNLLAHPNCLEYLMRVIRDLRPQIMVITEPEANHNS 362

Query: 296 QTFEDRFFGTLFHFGALFDCLEVCMNRCHANRMTFEEMYAGQHIRNIIASEGEERIFGHM 355
           Q F+DRF  TL +F A+FDCLE CM+R   +RM  E +Y    I+N IA EG+ER F  +
Sbjct: 363 QAFKDRFVETLLYFSAIFDCLEACMDRSDPSRMGAEGLYLSYAIKNSIAKEGKERTFQCV 422

Query: 356 KIDGWRDLFNRFGLVEAELSSWSLFQAELILRSFACGSSCTIDRNGECLIIGWKGIPHLS 415
           KID WR     FG+ E ELS  SL+QA  +++ FACGS CT+D NG+CLIIGWKG P  S
Sbjct: 423 KIDFWRAYLAEFGMEETELSMTSLYQAIQVVKKFACGSYCTLDMNGKCLIIGWKGTPINS 482

Query: 416 LSVWKF 421
           LSVWKF
Sbjct: 483 LSVWKF 488

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|224111944|ref|XP_002316030.1| GRAS family transcription factor [Populus trichocarpa] gi|222865070|gb|EEF02201.1| GRAS family transcription factor [Populus trichocarpa] Back     alignment and taxonomy information
>gi|255556358|ref|XP_002519213.1| DELLA protein RGL1, putative [Ricinus communis] gi|223541528|gb|EEF43077.1| DELLA protein RGL1, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|357448957|ref|XP_003594754.1| DELLA protein GAI [Medicago truncatula] gi|124359962|gb|ABN07978.1| GRAS transcription factor [Medicago truncatula] gi|355483802|gb|AES65005.1| DELLA protein GAI [Medicago truncatula] Back     alignment and taxonomy information
>gi|224111952|ref|XP_002316034.1| GRAS family transcription factor [Populus trichocarpa] gi|222865074|gb|EEF02205.1| GRAS family transcription factor [Populus trichocarpa] Back     alignment and taxonomy information
>gi|255564942|ref|XP_002523464.1| DELLA protein GAI1, putative [Ricinus communis] gi|223537292|gb|EEF38923.1| DELLA protein GAI1, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|224111950|ref|XP_002316033.1| GRAS family transcription factor [Populus trichocarpa] gi|222865073|gb|EEF02204.1| GRAS family transcription factor [Populus trichocarpa] Back     alignment and taxonomy information
>gi|124359966|gb|ABN07982.1| GRAS transcription factor [Medicago truncatula] Back     alignment and taxonomy information
>gi|356556012|ref|XP_003546321.1| PREDICTED: DELLA protein RGL2-like [Glycine max] Back     alignment and taxonomy information
>gi|357448963|ref|XP_003594757.1| DELLA protein GAI [Medicago truncatula] gi|355483805|gb|AES65008.1| DELLA protein GAI [Medicago truncatula] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query424
TAIR|locus:2099624547 RGL2 "RGA-like 2" [Arabidopsis 0.851 0.659 0.295 8.4e-42
TAIR|locus:2201557511 RGL1 "RGA-like 1" [Arabidopsis 0.693 0.575 0.308 1.5e-39
TAIR|locus:2005516587 RGA1 "REPRESSOR OF GA1-3 1" [A 0.839 0.606 0.281 9.9e-39
TAIR|locus:2157477523 RGL3 "RGA-like protein 3" [Ara 0.851 0.690 0.288 1.9e-37
TAIR|locus:2006747533 GAI "GIBBERELLIC ACID INSENSIT 0.839 0.667 0.276 1e-36
TAIR|locus:2165685405 AT5G41920 "AT5G41920" [Arabido 0.849 0.888 0.303 2.8e-34
TAIR|locus:2008086482 SCL3 "AT1G50420" [Arabidopsis 0.351 0.309 0.342 7.1e-34
TAIR|locus:2020487445 LAS "AT1G55580" [Arabidopsis t 0.653 0.622 0.284 7.4e-31
TAIR|locus:2164783490 PAT1 "AT5G48150" [Arabidopsis 0.841 0.728 0.255 3e-29
TAIR|locus:2008076597 SCL5 "AT1G50600" [Arabidopsis 0.853 0.606 0.264 9.8e-29
TAIR|locus:2099624 RGL2 "RGA-like 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 443 (161.0 bits), Expect = 8.4e-42, P = 8.4e-42
 Identities = 113/383 (29%), Positives = 190/383 (49%)

Query:    46 GVELVHLLLLSAEKIGSQQFDRASIFLDHVDKYSSTTGNPVQRLVHYFSKALRERFNLET 105
             GV LVH L+  AE I  +  + A   +  V   + +    + ++  YF++AL  R   + 
Sbjct:   177 GVRLVHALVACAEAIHQENLNLADALVKRVGTLAGSQAGAMGKVATYFAQALARRIYRD- 235

Query:   106 GRITSKGLKSEEVMLLLHP--EEVMASAKQALIACYQKVPFYQVTVFAGIQAVIENVSSA 163
                T++     +V   ++P  EEV+       +  Y+  P+ +   F   QA++E V++A
Sbjct:   236 --YTAE----TDVCAAVNPSFEEVLE------MHFYESCPYLKFAHFTANQAILEAVTTA 283

Query:   164 KKIHIIDLATRTGSHCPAIMQALATRQGCPPELLKITMVVGTTPSKQKFEEIENRLANFA 223
             +++H+IDL    G   PA+MQALA R G PP      +    T +    +++  +LA FA
Sbjct:   284 RRVHVIDLGLNQGMQWPALMQALALRPGGPPSFRLTGIGPPQTENSDSLQQLGWKLAQFA 343

Query:   224 ETINLPFPFN---ISFLTDIKD--FETN-EGEVVAVYSPVHLSHMIRKPNCLETFLTELR 277
             + + + F F       L+D++   FET  E E + V S   L  ++ +   +E  L  ++
Sbjct:   344 QNMGVEFEFKGLAAESLSDLEPEMFETRPESETLVVNSVFELHRLLARSGSIEKLLNTVK 403

Query:   278 KINPCVMVVIEVESNDNLQTFEDRFFGTLFHFGALFDCLEVCMNRCHANRMTFEEMYAGQ 337
              I P ++ V+E E+N N   F DRF   L ++ +LFD LE   +    +R+   E+Y G+
Sbjct:   404 AIKPSIVTVVEQEANHNGIVFLDRFNEALHYYSSLFDSLEDSYSLPSQDRV-MSEVYLGR 462

Query:   338 HIRNIIASEGEERIFGHMKIDGWRDLFNRFGLVEAELSSWSLFQAELILRSFACGSSCTI 397
              I N++A+EG +R+  H     WR      G     L S +  QA ++L  +A G    +
Sbjct:   463 QILNVVAAEGSDRVERHETAAQWRIRMKSAGFDPIHLGSSAFKQASMLLSLYATGDGYRV 522

Query:   398 DRNGECLIIGWKGIPHLSLSVWK 420
             + N  CL+IGW+  P ++ S WK
Sbjct:   523 EENDGCLMIGWQTRPLITTSAWK 545
GO:0005634 "nucleus" evidence=ISM;IDA;TAS
GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS;TAS
GO:0009740 "gibberellic acid mediated signaling pathway" evidence=RCA;TAS
GO:0010187 "negative regulation of seed germination" evidence=IMP
GO:0009938 "negative regulation of gibberellic acid mediated signaling pathway" evidence=TAS
GO:0009651 "response to salt stress" evidence=IGI
GO:0009723 "response to ethylene stimulus" evidence=IGI;RCA
GO:0009737 "response to abscisic acid stimulus" evidence=IEP;IGI;RCA
GO:0042538 "hyperosmotic salinity response" evidence=IGI;RCA
GO:0010029 "regulation of seed germination" evidence=IGI
GO:2000033 "regulation of seed dormancy process" evidence=IGI
GO:0009739 "response to gibberellin stimulus" evidence=IEP
GO:2000377 "regulation of reactive oxygen species metabolic process" evidence=IGI
GO:0009863 "salicylic acid mediated signaling pathway" evidence=IGI;RCA
GO:0009867 "jasmonic acid mediated signaling pathway" evidence=IGI;RCA
GO:0005515 "protein binding" evidence=IPI
GO:0009062 "fatty acid catabolic process" evidence=RCA
GO:0009686 "gibberellin biosynthetic process" evidence=RCA
GO:0009793 "embryo development ending in seed dormancy" evidence=RCA
GO:0009845 "seed germination" evidence=RCA
GO:0010162 "seed dormancy process" evidence=RCA
GO:0010325 "raffinose family oligosaccharide biosynthetic process" evidence=RCA
GO:0048444 "floral organ morphogenesis" evidence=RCA
GO:0048608 "reproductive structure development" evidence=RCA
TAIR|locus:2201557 RGL1 "RGA-like 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2005516 RGA1 "REPRESSOR OF GA1-3 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2157477 RGL3 "RGA-like protein 3" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2006747 GAI "GIBBERELLIC ACID INSENSITIVE" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2165685 AT5G41920 "AT5G41920" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2008086 SCL3 "AT1G50420" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2020487 LAS "AT1G55580" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2164783 PAT1 "AT5G48150" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2008076 SCL5 "AT1G50600" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
GRAS78
GRAS family transcription factor (489 aa)
(Populus trichocarpa)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query424
pfam03514372 pfam03514, GRAS, GRAS family transcription factor 7e-73
>gnl|CDD|217595 pfam03514, GRAS, GRAS family transcription factor Back     alignment and domain information 
 Score =  232 bits (595), Expect = 7e-73
 Identities = 119/380 (31%), Positives = 186/380 (48%), Gaps = 16/380 (4%)

Query: 49  LVHLLLLSAEKIGSQQFDRASIFLDHVDKYSSTTGNPVQRLVHYFSKALRERFNLETGRI 108
           LVHLLL  AE + S     A   L  +++ +S  G+P+QRL  YF++AL  R    +G  
Sbjct: 1   LVHLLLACAEAVSSGDLSLAQAILARLNQLASPAGDPMQRLAAYFTEALAARLA-RSGSS 59

Query: 109 TSKGLKSEEVMLLLHPEEVMASAKQALIACYQKVPFYQVTVFAGIQAVIENVSSAKKIHI 168
               L                    A    Y+  P+ +   F   QA++E     +++HI
Sbjct: 60  IYSALPPSPS-----TPSDSVEVLAAYKLFYEVSPYLKFGHFTANQAILEAFEGEERVHI 114

Query: 169 IDLATRTGSHCPAIMQALATRQGCPPELLKITMVVGTTP-SKQKFEEIENRLANFAETIN 227
           ID     G   P+++QALA+R G PP  L+IT +      S ++ EE  +RLA FA+++ 
Sbjct: 115 IDFDIGQGLQWPSLIQALASRPGGPP-HLRITGIGSPQFSSAEELEETGDRLAQFADSLG 173

Query: 228 LPFPFNISFLT-----DIKDFETNEGEVVAVYSPVHLSHMIRKPNCLE--TFLTELRKIN 280
           +PF FN          D++  +   GE +AV     L  ++ +   LE  TFL  ++ +N
Sbjct: 174 VPFEFNPLVAKRLEDLDLEMLDVRPGEALAVNCVFALHRLLDESVSLESPTFLRLVKSLN 233

Query: 281 PCVMVVIEVESNDNLQTFEDRFFGTLFHFGALFDCLEVCMNRCHANRMTFEEMYAGQHIR 340
           P V+ ++E E+N N   F  RF   L ++ ALFD LE  + R    R   E    G+ I 
Sbjct: 234 PKVVTLVEQEANHNSAPFLARFVEALHYYSALFDSLEATLPRDSEERRKVERELLGREIV 293

Query: 341 NIIASEGEERIFGHMKIDGWRDLFNRFGLVEAELSSWSLFQAELILRSFACGSSCTIDRN 400
           N++A EG ER+  H     WR+   R G     LS +++ QA+L+LR +       ++ +
Sbjct: 294 NVVACEGAERVERHETFGKWRERMRRAGFRPVPLSEFAVKQAKLLLRLYY-VDGYRVEED 352

Query: 401 GECLIIGWKGIPHLSLSVWK 420
              L++GWKG P ++ S W+
Sbjct: 353 NGSLVLGWKGRPLVAASAWR 372

Sequence analysis of the products of the GRAS (GAI, RGA, SCR) gene family indicates that they share a variable amino-terminus and a highly conserved carboxyl-terminus that contains five recognisable motifs. Proteins in the GRAS family are transcription factors that seem to be involved in development and other processes. Mutation of the SCARECROW (SCR) gene results in a radial pattern defect, loss of a ground tissue layer, in the root. The PAT1 protein is involved in phytochrome A signal transduction. Length = 372

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 424
PF03514374 GRAS: GRAS domain family; InterPro: IPR005202 Sequ 100.0
PRK15451247 tRNA cmo(5)U34 methyltransferase; Provisional 97.42
TIGR00740239 methyltransferase, putative. A simple BLAST search 96.96
TIGR02752231 MenG_heptapren 2-heptaprenyl-1,4-naphthoquinone me 96.3
PLN02233261 ubiquinone biosynthesis methyltransferase 96.18
TIGR02716306 C20_methyl_CrtF C-20 methyltransferase BchU. Membe 95.39
PF01209233 Ubie_methyltran: ubiE/COQ5 methyltransferase famil 95.26
PLN02336475 phosphoethanolamine N-methyltransferase 93.62
PRK06202232 hypothetical protein; Provisional 93.54
TIGR01934223 MenG_MenH_UbiE ubiquinone/menaquinone biosynthesis 93.31
COG2226238 UbiE Methylase involved in ubiquinone/menaquinone 93.0
PF13489161 Methyltransf_23: Methyltransferase domain; PDB: 3J 92.57
PTZ00098263 phosphoethanolamine N-methyltransferase; Provision 92.39
PF13649101 Methyltransf_25: Methyltransferase domain; PDB: 3B 92.26
PRK00216239 ubiE ubiquinone/menaquinone biosynthesis methyltra 91.61
PLN02396322 hexaprenyldihydroxybenzoate methyltransferase 90.89
PRK14103255 trans-aconitate 2-methyltransferase; Provisional 90.87
TIGR00477195 tehB tellurite resistance protein TehB. Part of a 90.81
TIGR03438301 probable methyltransferase. This model represents 90.5
PRK08317241 hypothetical protein; Provisional 89.93
PRK05785226 hypothetical protein; Provisional 89.45
smart00138264 MeTrc Methyltransferase, chemotaxis proteins. Meth 89.22
PF12847112 Methyltransf_18: Methyltransferase domain; PDB: 3G 88.68
PF03291331 Pox_MCEL: mRNA capping enzyme; InterPro: IPR004971 88.53
PRK11207197 tellurite resistance protein TehB; Provisional 87.92
TIGR02072240 BioC biotin biosynthesis protein BioC. This enzyme 87.91
PF13847152 Methyltransf_31: Methyltransferase domain; PDB: 3T 87.47
TIGR03587204 Pse_Me-ase pseudaminic acid biosynthesis-associate 87.16
PRK12335287 tellurite resistance protein TehB; Provisional 86.11
PF0824195 Methyltransf_11: Methyltransferase domain; InterPr 86.04
PRK01683258 trans-aconitate 2-methyltransferase; Provisional 85.67
PLN02336 475 phosphoethanolamine N-methyltransferase 84.98
PLN02244340 tocopherol O-methyltransferase 83.91
PLN02232160 ubiquinone biosynthesis methyltransferase 82.94
PF03848192 TehB: Tellurite resistance protein TehB; InterPro: 81.81
TIGR00537179 hemK_rel_arch HemK-related putative methylase. The 80.51
PRK09489342 rsmC 16S ribosomal RNA m2G1207 methyltransferase; 80.45
>PF03514 GRAS: GRAS domain family; InterPro: IPR005202 Sequence analysis of the products of the GRAS (GAI, RGA, SCR) gene family indicates that they share a variable N terminus and a highly conserved C terminus that contains five recognizable motifs [] Back     alignment and domain information 
Probab=100.00  E-value=3.7e-111  Score=858.28  Aligned_cols=363  Identities=36%  Similarity=0.661  Sum_probs=332.0

Q ss_pred             HHHHHHHHHHHHhcCCHHHHHHHHHHhcccCCCCCChhhhHHHHHHHHHHHhhcccCCCcccccchhhhhhhcCChHHHH
Q 043031           49 LVHLLLLSAEKIGSQQFDRASIFLDHVDKYSSTTGNPVQRLVHYFSKALRERFNLETGRITSKGLKSEEVMLLLHPEEVM  128 (424)
Q Consensus        49 L~~LLl~cA~Av~~g~~~~A~~lL~~l~~las~~G~~~qRla~yF~eAL~~Rl~~~~~~~~~~~l~~~~~~~~~~~~~~~  128 (424)
                      |++||++||+||++||.+.|+.+|++|++++||+|||+||||+||++||.+|+.+. ++..++.+.+..    .++.. .
T Consensus         1 L~~lLl~cA~Av~~~~~~~A~~lL~~l~~~as~~g~~~qRla~yF~eAL~~Rl~~~-~~~~~~~~~~~~----~~~~~-~   74 (374)
T PF03514_consen    1 LVQLLLACAEAVAAGDFARAQELLARLRQLASPTGDPMQRLAAYFAEALAARLSGS-GPGLYSALPPSS----PSPSE-S   74 (374)
T ss_pred             CHHHHHHHHHHHHcCCHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHhhHHHHHhcc-CcccccCCCCcc----ccccc-h
Confidence            68999999999999999999999999999999999999999999999999999984 333333332211    11111 1


Q ss_pred             HHHHHHHHHHHhcCChhhhHHHHHHHHHHhhhcCCCeeEEEeccCCCCCChHHHHHHHHhcCCCCCcceEEEEEeCCCC-
Q 043031          129 ASAKQALIACYQKVPFYQVTVFAGIQAVIENVSSAKKIHIIDLATRTGSHCPAIMQALATRQGCPPELLKITMVVGTTP-  207 (424)
Q Consensus       129 ~~~~~a~~~~~e~~P~~kfa~~tANqaIleA~~g~~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~~LRIT~~i~~~~-  207 (424)
                      .....+++.||++|||+||||||||||||||++|+++||||||||++|+|||+|||+||.|++||| +||||| |++|. 
T Consensus        75 ~~~~~a~~~~~~~~P~~~fa~~taNqaIleA~~g~~~vHIID~~i~~G~QW~~LiqaLa~R~~gpp-~LrIT~-i~~~~~  152 (374)
T PF03514_consen   75 SEQLAAYQLFYELSPFLKFAHFTANQAILEAFEGERRVHIIDFGIGFGVQWPSLIQALASRPGGPP-SLRITG-IGPPNS  152 (374)
T ss_pred             HHHHHHHHHHHHHhhHHhhhhhchhHHHHHHhccCcceEEEeccCCcchHHHHHHHHHhcCCCCCC-eEEEEe-ccCCCC
Confidence            122358899999999999999999999999999999999999999999999999999999999999 699999 98754 


Q ss_pred             -CHHHHHHHHHHHHHHHHhCCCceEEEEEecCCCcc-----cccCCCcEEEEeccccccccCCCc----chHHHHHHHHH
Q 043031          208 -SKQKFEEIENRLANFAETINLPFPFNISFLTDIKD-----FETNEGEVVAVYSPVHLSHMIRKP----NCLETFLTELR  277 (424)
Q Consensus       208 -~~~~l~~tg~rL~~fA~~lgvpFeF~~v~~~~l~~-----l~~~~~E~laVN~~~~Lh~l~~~~----~~~~~~L~~ir  277 (424)
                       +.+.+++||+||.+||+++||||||++|..+++++     |++++||+|||||+|+||||.+++    ++++.||+.||
T Consensus       153 ~~~~~l~~~g~rL~~fA~~lgv~fef~~v~~~~~e~l~~~~l~~~~~E~laVn~~~~Lh~l~~~~~~~~~~~~~~L~~ir  232 (374)
T PF03514_consen  153 GSADELQETGRRLAEFARSLGVPFEFHPVVVESLEDLDPSMLRLRPGEALAVNCMFQLHHLLDESGALENPRDAFLRVIR  232 (374)
T ss_pred             CcHHHHHHHHHHHHHHHHHcCccEEEEecccCchhhCCHHHhCccCCcEEEEEeehhhhhhccccccccchHHHHHHHHH
Confidence             68899999999999999999999999986665554     788999999999999999998643    46889999999


Q ss_pred             hcCCCeEEEEeeeCCCCCCchHHHHHHHHHHHHHHHHhhhhhcCCCchhHHHHHHHHHhHhHHHHHhhcccccccCCCCh
Q 043031          278 KINPCVMVVIEVESNDNLQTFEDRFFGTLFHFGALFDCLEVCMNRCHANRMTFEEMYAGQHIRNIIASEGEERIFGHMKI  357 (424)
Q Consensus       278 ~L~P~vvvl~E~ea~~ns~~F~~RF~eaL~~YsalFDsLda~~~~~s~~R~~iE~~~lg~eI~niVaceG~~R~ER~e~~  357 (424)
                      +|+|+|||++|+|+|||+|+|++||.|||+||+++|||||+++|+++++|..+|+.+||++|+|||||||.+|+||||++
T Consensus       233 ~L~P~vvv~~E~ea~~n~~~F~~RF~eal~yYsalfdsle~~~~~~~~~r~~~E~~~~~~eI~niVa~eg~~R~eR~e~~  312 (374)
T PF03514_consen  233 SLNPKVVVLVEQEADHNSPSFLERFREALHYYSALFDSLEACLPRDSEERLAVERLFFGREIMNIVACEGEERVERHERL  312 (374)
T ss_pred             hcCCCEEEEEeecCCCCCCchHHHHHHHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHhhhHHHHhhhcccccccccccch
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhHHHHHhcCCCccccCChhHHHHHHHHHHhcCCCCceEEeecCCEEEEeECCceeEEEeece
Q 043031          358 DGWRDLFNRFGLVEAELSSWSLFQAELILRSFACGSSCTIDRNGECLIIGWKGIPHLSLSVWK  420 (424)
Q Consensus       358 ~~W~~r~~~aGF~~~~ls~~~~~qa~~ll~~~~~~~~~~~~~~~~~L~LgWk~~pL~~~SaW~  420 (424)
                      ++|+.||++|||+++|+|++++.||+.|+++|+ +++|++++++|||+|||||+||+++||||
T Consensus       313 ~~W~~r~~~aGF~~~~ls~~~~~qa~~ll~~~~-~~g~~v~~~~~~l~L~Wk~~pL~~~SaWr  374 (374)
T PF03514_consen  313 EQWRRRMRRAGFRPVPLSEFAVSQAKLLLRKFP-GDGYTVEEDGGCLLLGWKGRPLVAASAWR  374 (374)
T ss_pred             hHHHHHHHhcCCeecCCCHHHHHHHHHHHhccC-CCCeEEEEcCCEEEEEeCCcEEEEEeCcC
Confidence            999999999999999999999999999999998 66789999999999999999999999997

Proteins in the GRAS family are transcription factors that seem to be involved in development and other processes. Mutation of the SCARECROW (SCR) gene results in a radial pattern defect, loss of a ground tissue layer, in the root. The PAT1 protein is involved in phytochrome A signal transduction []. GRAS proteins contain a conserved region of about 350 amino acids that can be divided in 5 motifs, found in the following order: leucine heptad repeat I, the VHIID motif, leucine heptad repeat II, the PFYRE motif and the SAW motif [, ]. Plant specific GRAS proteins have parallels in their motif structure to the animal Signal Transducers and Activators of Transcription (STAT) family of proteins [] which suggests also some parallels in their functions.
>PRK15451 tRNA cmo(5)U34 methyltransferase; Provisional Back     alignment and domain information
>TIGR00740 methyltransferase, putative Back     alignment and domain information
>TIGR02752 MenG_heptapren 2-heptaprenyl-1,4-naphthoquinone methyltransferase Back     alignment and domain information
>PLN02233 ubiquinone biosynthesis methyltransferase Back     alignment and domain information
>TIGR02716 C20_methyl_CrtF C-20 methyltransferase BchU Back     alignment and domain information
>PF01209 Ubie_methyltran: ubiE/COQ5 methyltransferase family; InterPro: IPR004033 A number of methyltransferases have been shown to share regions of similarities [] Back     alignment and domain information
>PLN02336 phosphoethanolamine N-methyltransferase Back     alignment and domain information
>PRK06202 hypothetical protein; Provisional Back     alignment and domain information
>TIGR01934 MenG_MenH_UbiE ubiquinone/menaquinone biosynthesis methyltransferases Back     alignment and domain information
>COG2226 UbiE Methylase involved in ubiquinone/menaquinone biosynthesis [Coenzyme metabolism] Back     alignment and domain information
>PF13489 Methyltransf_23: Methyltransferase domain; PDB: 3JWJ_A 3JWH_B 2AOV_B 2AOT_A 1JQD_B 2AOX_A 1JQE_A 2AOU_B 2AOW_A 3DLI_C Back     alignment and domain information
>PTZ00098 phosphoethanolamine N-methyltransferase; Provisional Back     alignment and domain information
>PF13649 Methyltransf_25: Methyltransferase domain; PDB: 3BXO_B 3GGD_A 3PX2_A 3PX3_A 3PFH_D 3PFG_A 1Y8C_A Back     alignment and domain information
>PRK00216 ubiE ubiquinone/menaquinone biosynthesis methyltransferase; Reviewed Back     alignment and domain information
>PLN02396 hexaprenyldihydroxybenzoate methyltransferase Back     alignment and domain information
>PRK14103 trans-aconitate 2-methyltransferase; Provisional Back     alignment and domain information
>TIGR00477 tehB tellurite resistance protein TehB Back     alignment and domain information
>TIGR03438 probable methyltransferase Back     alignment and domain information
>PRK08317 hypothetical protein; Provisional Back     alignment and domain information
>PRK05785 hypothetical protein; Provisional Back     alignment and domain information
>smart00138 MeTrc Methyltransferase, chemotaxis proteins Back     alignment and domain information
>PF12847 Methyltransf_18: Methyltransferase domain; PDB: 3G2Q_A 3G2O_A 3G2M_B 3G2P_B 3D2L_B 1IM8_B 3NJR_A 3E05_H 3EVZ_A 3HM2_A Back     alignment and domain information
>PF03291 Pox_MCEL: mRNA capping enzyme; InterPro: IPR004971 This is a family of viral mRNA capping enzymes Back     alignment and domain information
>PRK11207 tellurite resistance protein TehB; Provisional Back     alignment and domain information
>TIGR02072 BioC biotin biosynthesis protein BioC Back     alignment and domain information
>PF13847 Methyltransf_31: Methyltransferase domain; PDB: 3T0I_B 3SVZ_B 3SXJ_A 3F4K_A 3GU3_B 2GH1_A 1R8Y_E 1R8X_B 2B3T_A 1T43_A Back     alignment and domain information
>TIGR03587 Pse_Me-ase pseudaminic acid biosynthesis-associated methylase Back     alignment and domain information
>PRK12335 tellurite resistance protein TehB; Provisional Back     alignment and domain information
>PF08241 Methyltransf_11: Methyltransferase domain; InterPro: IPR013216 Methyl transfer from the ubiquitous S-adenosyl-L-methionine (SAM) to either nitrogen, oxygen or carbon atoms is frequently employed in diverse organisms ranging from bacteria to plants and mammals Back     alignment and domain information
>PRK01683 trans-aconitate 2-methyltransferase; Provisional Back     alignment and domain information
>PLN02336 phosphoethanolamine N-methyltransferase Back     alignment and domain information
>PLN02244 tocopherol O-methyltransferase Back     alignment and domain information
>PLN02232 ubiquinone biosynthesis methyltransferase Back     alignment and domain information
>PF03848 TehB: Tellurite resistance protein TehB; InterPro: IPR015985 Tellurite resistance protein TehB is part of a tellurite-reducing operon tehA and tehB Back     alignment and domain information
>TIGR00537 hemK_rel_arch HemK-related putative methylase Back     alignment and domain information
>PRK09489 rsmC 16S ribosomal RNA m2G1207 methyltransferase; Provisional Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query424
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 5e-07
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
 Score = 51.0 bits (121), Expect = 5e-07
 Identities = 50/416 (12%), Positives = 104/416 (25%), Gaps = 118/416 (28%)

Query: 57  AEKIGSQQFDRASIFLDHVDKYSSTTGNPVQRLVHYFSKALRERFNLETGRITS-KGLKS 115
              I ++Q   + +       Y     + +      F+K    R         +   L+ 
Sbjct: 95  MSPIKTEQRQPSMM----TRMYIEQR-DRLYNDNQVFAKYNVSRLQPYLKLRQALLELRP 149

Query: 116 EEVMLLLHPEEVMA-SAKQALIACYQKVPFYQVTVFAGIQAVIENVSSAKKIHIIDLAT- 173
            +  +L+     +  S K  +           V +   +Q  ++      KI  ++L   
Sbjct: 150 AK-NVLIDG---VLGSGKTWVAL--------DVCLSYKVQCKMDF-----KIFWLNLKNC 192

Query: 174 RTGSHCPAIMQALATRQGCPPELLKITMVVGTTPSKQKFEEIENRLANF----------- 222
            +      ++Q L  +               ++  K +   I+  L              
Sbjct: 193 NSPETVLEMLQKLLYQIDPNWTSR----SDHSSNIKLRIHSIQAELRRLLKSKPYENCLL 248

Query: 223 -------AETINLPFPFNIS----FLT-DIKDFETNEGEVVAVYSPVHLSHMIRKPNCLE 270
                  A+  N    FN+S      T   +  +          S  H S  +       
Sbjct: 249 VLLNVQNAKAWN---AFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKS 305

Query: 271 TFLT-----------ELRKINPCVMVVIEVESNDNLQTFEDRFFGTLFHFGALFDCLEVC 319
             L            E+   NP  + +I                                
Sbjct: 306 LLLKYLDCRPQDLPREVLTTNPRRLSII----------------------AESI------ 337

Query: 320 MNRCHANRMTFEEMYAGQHIRNIIASEGEERIFGHMKIDGWRDLFNRFGL------VEAE 373
             R         +      +  II     E     ++   +R +F+R  +      +   
Sbjct: 338 --RDGLATWDNWKHVNCDKLTTII-----ESSLNVLEPAEYRKMFDRLSVFPPSAHIPTI 390

Query: 374 LSS--W---SLFQAELILRSFACGSSCTIDRNGECLIIGWKGIPHLSLSVWKFHRE 424
           L S  W         +++          +++  +   I    IP + L + K   E
Sbjct: 391 LLSLIWFDVIKSDVMVVVNKLH--KYSLVEKQPKESTI---SIPSIYLEL-KVKLE 440

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query424
4gek_A261 TRNA (CMO5U34)-methyltransferase; structural genom 97.73
2aot_A292 HMT, histamine N-methyltransferase; classic methyl 96.51
3dtn_A234 Putative methyltransferase MM_2633; structural gen 96.44
1vl5_A260 Unknown conserved protein BH2331; putative methylt 96.13
3dh0_A219 SAM dependent methyltransferase; cystal structure, 95.94
3dlc_A219 Putative S-adenosyl-L-methionine-dependent methylt 95.66
3htx_A950 HEN1; HEN1, small RNA methyltransferase, protein-R 95.47
2r3s_A335 Uncharacterized protein; methyltransferase domain, 95.45
3ujc_A266 Phosphoethanolamine N-methyltransferase; parasite; 95.2
3mgg_A276 Methyltransferase; NYSGXRC, PSI-II, protein struct 95.14
3dp7_A363 SAM-dependent methyltransferase; structural genomi 94.97
1xxl_A239 YCGJ protein; structural genomics, protein structu 94.92
4a6d_A353 Hydroxyindole O-methyltransferase; melatonin, circ 94.7
3f4k_A257 Putative methyltransferase; structural genomics, P 94.68
3bkx_A275 SAM-dependent methyltransferase; YP_807781.1, cycl 94.46
3bus_A273 REBM, methyltransferase; rebeccamycin synthesis; H 94.3
4fsd_A383 Arsenic methyltransferase; rossmann fold; 1.75A {C 94.29
1x19_A359 CRTF-related protein; methyltransferase, bacterioc 93.94
3vc1_A312 Geranyl diphosphate 2-C-methyltransferase; rossman 93.82
3h2b_A203 SAM-dependent methyltransferase; alpha-beta protei 93.52
1xtp_A254 LMAJ004091AAA; SGPP, structural genomics, PSI, pro 93.25
3jwh_A217 HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena 93.13
3jwg_A219 HEN1, methyltransferase type 12; 1.90A {Clostridiu 93.04
3sm3_A235 SAM-dependent methyltransferases; NESG, structural 92.83
2ip2_A334 Probable phenazine-specific methyltransferase; pyo 92.82
3hnr_A220 Probable methyltransferase BT9727_4108; structural 92.82
3mcz_A352 O-methyltransferase; adomet_mtases, S-adenosylmeth 92.66
1qzz_A374 RDMB, aclacinomycin-10-hydroxylase; anthracycline, 92.43
3l8d_A242 Methyltransferase; structural genomics, PSI, nysgr 91.9
3p9c_A364 Caffeic acid O-methyltransferase; S-adenosylmethio 91.8
3m70_A286 Tellurite resistance protein TEHB homolog; structu 91.69
3gwz_A369 MMCR; methyltransferase, mitomycin, S-adenosyl met 91.17
3ccf_A279 Cyclopropane-fatty-acyl-phospholipid synthase; YP_ 90.96
3kkz_A267 Uncharacterized protein Q5LES9; putative methyltra 90.95
2qe6_A274 Uncharacterized protein TFU_2867; putative methylt 90.72
3reo_A368 (ISO)eugenol O-methyltransferase; directed evoluti 90.61
3g5l_A253 Putative S-adenosylmethionine dependent methyltran 90.6
3e23_A211 Uncharacterized protein RPA2492; alpha-beta protei 90.44
3hem_A302 Cyclopropane-fatty-acyl-phospholipid synthase 2; p 90.37
3ocj_A305 Putative exported protein; structural genomics, PS 90.22
1tw3_A360 COMT, carminomycin 4-O-methyltransferase; anthracy 90.21
3gu3_A284 Methyltransferase; alpha-beta protein, structural 90.02
3ofk_A216 Nodulation protein S; NODS, N-methyltransferase, S 90.02
2xvm_A199 Tellurite resistance protein TEHB; antibiotic resi 89.24
3i53_A332 O-methyltransferase; CO-complex, rossmann-like fol 89.02
3giw_A277 Protein of unknown function DUF574; rossmann-fold 88.68
3bgv_A313 MRNA CAP guanine-N7 methyltransferase; alternative 88.51
1y8c_A246 S-adenosylmethionine-dependent methyltransferase; 88.48
3dli_A240 Methyltransferase; PSI-II, NYSGXRC, structural gen 88.26
1nkv_A256 Hypothetical protein YJHP; structural genomics, PS 88.12
2fk8_A318 Methoxy mycolic acid synthase 4; S-adenosylmethion 87.68
2o57_A297 Putative sarcosine dimethylglycine methyltransfera 87.53
4e2x_A416 TCAB9; kijanose, tetronitrose, tetradeoxy sugar, s 87.31
2yqz_A263 Hypothetical protein TTHA0223; RNA methyltransfera 86.89
1kpg_A287 CFA synthase;, cyclopropane-fatty-acyl-phospholipi 86.81
3g5t_A299 Trans-aconitate 3-methyltransferase; structural ge 86.73
4dcm_A375 Ribosomal RNA large subunit methyltransferase G; 2 86.39
1ve3_A227 Hypothetical protein PH0226; dimer, riken structur 86.33
1wzn_A252 SAM-dependent methyltransferase; structural genomi 86.09
3p9n_A189 Possible methyltransferase (methylase); RV2966C, a 86.0
2vdw_A302 Vaccinia virus capping enzyme D1 subunit; nucleoti 85.12
2p7i_A250 Hypothetical protein; putative methyltransferase, 84.59
3ou2_A218 SAM-dependent methyltransferase; O-methyltransfera 84.39
3lst_A348 CALO1 methyltransferase; calicheamicin, enediyne, 84.2
1dus_A194 MJ0882; hypothetical protein, methanococcus jannas 84.14
2p35_A259 Trans-aconitate 2-methyltransferase; SAM dependent 83.55
3hm2_A178 Precorrin-6Y C5,15-methyltransferase; alpha-beta-s 83.16
3g2m_A299 PCZA361.24; SAM-dependent methyltransferase, glyco 83.08
3bkw_A243 MLL3908 protein, S-adenosylmethionine dependent me 83.07
3cgg_A195 SAM-dependent methyltransferase; NP_600671.1, meth 82.78
3e8s_A227 Putative SAM dependent methyltransferase; NP_74470 82.59
3d2l_A243 SAM-dependent methyltransferase; ZP_00538691.1, st 82.49
4htf_A285 S-adenosylmethionine-dependent methyltransferase; 82.06
3thr_A293 Glycine N-methyltransferase; GNMT, folate, methylt 81.52
1vlm_A219 SAM-dependent methyltransferase; possible histamin 81.36
2yxd_A183 Probable cobalt-precorrin-6Y C(15)-methyltransfer 80.2
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A* Back     alignment and structure
Probab=97.73  E-value=0.00033  Score=66.99  Aligned_cols=109  Identities=17%  Similarity=0.234  Sum_probs=68.2

Q ss_pred             eeEEEeccCCCCCChHHHHHHHHhcCCCCCcceEEEEEeCCCCCHHHHHHHHHHHHHHHHhCCCceEEEEEecCCCcccc
Q 043031          165 KIHIIDLATRTGSHCPAIMQALATRQGCPPELLKITMVVGTTPSKQKFEEIENRLANFAETINLPFPFNISFLTDIKDFE  244 (424)
Q Consensus       165 ~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~~LRIT~~i~~~~~~~~l~~tg~rL~~fA~~lgvpFeF~~v~~~~l~~l~  244 (424)
                      .-+|+|+|.|.|.    +...|+.+- ++|. .+||| |+.  +...++.+.+++.++-  .+.+.+|..   .++.++.
T Consensus        71 ~~~vLDlGcGtG~----~~~~la~~~-~~~~-~~v~g-vD~--s~~ml~~A~~~~~~~~--~~~~v~~~~---~D~~~~~  136 (261)
T 4gek_A           71 GTQVYDLGCSLGA----ATLSVRRNI-HHDN-CKIIA-IDN--SPAMIERCRRHIDAYK--APTPVDVIE---GDIRDIA  136 (261)
T ss_dssp             TCEEEEETCTTTH----HHHHHHHTC-CSSS-CEEEE-EES--CHHHHHHHHHHHHTSC--CSSCEEEEE---SCTTTCC
T ss_pred             CCEEEEEeCCCCH----HHHHHHHhc-CCCC-CEEEE-EEC--CHHHHHHHHHHHHhhc--cCceEEEee---ccccccc
Confidence            3479999999884    556677664 3453 89999 985  7888888877765332  223344432   3555555


Q ss_pred             cCCCcEEEEeccccccccCCCcchHHHHHHHH-HhcCCCeEE-EEeeeC
Q 043031          245 TNEGEVVAVYSPVHLSHMIRKPNCLETFLTEL-RKINPCVMV-VIEVES  291 (424)
Q Consensus       245 ~~~~E~laVN~~~~Lh~l~~~~~~~~~~L~~i-r~L~P~vvv-l~E~ea  291 (424)
                      ..+-.+++.|  +.|||+..  ..+..+|+.| |.|+|.-.. +.|.-.
T Consensus       137 ~~~~d~v~~~--~~l~~~~~--~~~~~~l~~i~~~LkpGG~lii~e~~~  181 (261)
T 4gek_A          137 IENASMVVLN--FTLQFLEP--SERQALLDKIYQGLNPGGALVLSEKFS  181 (261)
T ss_dssp             CCSEEEEEEE--SCGGGSCH--HHHHHHHHHHHHHEEEEEEEEEEEEBC
T ss_pred             ccccccceee--eeeeecCc--hhHhHHHHHHHHHcCCCcEEEEEeccC
Confidence            4444455545  45788753  3456788776 678997654 445543
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A* Back     alignment and structure
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei} Back     alignment and structure
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41 Back     alignment and structure
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus} Back     alignment and structure
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis} Back     alignment and structure
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana} Back     alignment and structure
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme} Back     alignment and structure
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A* Back     alignment and structure
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei} Back     alignment and structure
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus} Back     alignment and structure
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A* Back     alignment and structure
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A* Back     alignment and structure
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A* Back     alignment and structure
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei} Back     alignment and structure
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes} Back     alignment and structure
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A Back     alignment and structure
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A* Back     alignment and structure
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A* Back     alignment and structure
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032} Back     alignment and structure
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42 Back     alignment and structure
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A Back     alignment and structure
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A Back     alignment and structure
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei} Back     alignment and structure
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa} Back     alignment and structure
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian} Back     alignment and structure
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis} Back     alignment and structure
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A* Back     alignment and structure
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis} Back     alignment and structure
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A* Back     alignment and structure
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae} Back     alignment and structure
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A* Back     alignment and structure
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413} Back     alignment and structure
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A* Back     alignment and structure
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca} Back     alignment and structure
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A* Back     alignment and structure
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str} Back     alignment and structure
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris} Back     alignment and structure
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A* Back     alignment and structure
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis} Back     alignment and structure
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A* Back     alignment and structure
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A Back     alignment and structure
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A* Back     alignment and structure
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A* Back     alignment and structure
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A* Back     alignment and structure
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A* Back     alignment and structure
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A* Back     alignment and structure
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43 Back     alignment and structure
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus} Back     alignment and structure
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21 Back     alignment and structure
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A* Back     alignment and structure
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18 Back     alignment and structure
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A* Back     alignment and structure
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A Back     alignment and structure
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A* Back     alignment and structure
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae} Back     alignment and structure
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli} Back     alignment and structure
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43 Back     alignment and structure
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43 Back     alignment and structure
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis} Back     alignment and structure
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus} Back     alignment and structure
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A Back     alignment and structure
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A* Back     alignment and structure
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora} Back     alignment and structure
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4 Back     alignment and structure
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str} Back     alignment and structure
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae} Back     alignment and structure
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A* Back     alignment and structure
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti} Back     alignment and structure
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032} Back     alignment and structure
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440} Back     alignment and structure
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15} Back     alignment and structure
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli} Back     alignment and structure
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A* Back     alignment and structure
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41 Back     alignment and structure
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query424
d1im8a_225 Hypothetical protein HI0319 (YecO) {Haemophilus in 97.44
d1jqea_280 Histamine methyltransferase {Human (Homo sapiens) 96.91
d1qzza2256 Aclacinomycin-10-hydroxylase RdmB {Streptomyces pu 96.47
d1vl5a_231 Hypothetical protein BH2331 {Bacillus halodurans [ 96.25
d1xxla_234 Hypothetical protein YcgJ {Bacillus subtilis [TaxI 96.22
d1tw3a2253 Carminomycin 4-O-methyltransferase {Streptomyces p 96.15
d1ri5a_252 mRNA cap (Guanine N-7) methyltransferase {Fungus ( 96.03
d2gh1a1281 Methyltransferase BC2162 {Bacillus cereus [TaxId: 95.14
d1ve3a1226 Hypothetical protein PH0226 {Archaeon Pyrococcus h 94.67
d1vlma_208 Possible histamine N-methyltransferase TM1293 {The 94.13
d2i6ga1198 Putative methyltransferase TehB {Salmonella typhim 94.02
d2fk8a1280 Methoxy mycolic acid synthase 4, Mma4 {Mycobacteri 93.98
d1nkva_245 Hypothetical Protein YjhP {Escherichia coli [TaxId 93.97
d2o57a1282 Putative sarcosine dimethylglycine methyltransfera 93.81
d1y8ca_246 Putative methyltransferase CAC2371 {Clostridium ac 93.21
d2ex4a1222 Adrenal gland protein AD-003 (C9orf32) {Human (Hom 92.95
d1fp1d2244 Chalcone O-methyltransferase {Alfalfa (Medicago sa 91.79
d1wzna1251 Hypothetical methyltransferase PH1305 {Archaeon Py 91.24
d1fp2a2244 Isoflavone O-methyltransferase {Alfalfa (Medicago 91.09
d2avna1246 Hypothetical methyltransferase TM1389 {Thermotoga 88.8
d1xtpa_254 Hypothetical protein Lmaj004091aaa (LmjF30.0810) { 87.99
d1xvaa_292 Glycine N-methyltransferase {Rat (Rattus norvegicu 87.51
d1dusa_194 Hypothetical protein MJ0882 {Archaeon Methanococcu 82.99
d1kyza2243 Caffeic acid/5-hydroxyferulic acid 3/5-O-methyltra 82.92
>d1im8a_ c.66.1.14 (A:) Hypothetical protein HI0319 (YecO) {Haemophilus influenzae [TaxId: 727]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Hypothetical protein HI0319 (YecO)
domain: Hypothetical protein HI0319 (YecO)
species: Haemophilus influenzae [TaxId: 727]

Probab=97.44  E-value=0.0013  Score=58.47  Aligned_cols=106  Identities=20%  Similarity=0.263  Sum_probs=67.9

Q ss_pred             CeeEEEeccCCCCCChHHHHHHHHhcCCCCCcceEEEEEeCCCCCHHHHHHHHHHHHHHHHhCCCceEEEEEecCCCccc
Q 043031          164 KKIHIIDLATRTGSHCPAIMQALATRQGCPPELLKITMVVGTTPSKQKFEEIENRLANFAETINLPFPFNISFLTDIKDF  243 (424)
Q Consensus       164 ~~VHIIDf~i~~G~QWp~LiqaLa~R~ggpP~~LRIT~~i~~~~~~~~l~~tg~rL~~fA~~lgvpFeF~~v~~~~l~~l  243 (424)
                      +.-||+|+|.|.|.    +...|+... ..| ..++|| |+.  |...++.+.+++.    ..+....++.+. .+..++
T Consensus        39 ~~~~vLDlGCGtG~----~~~~l~~~~-~~~-~~~v~g-iD~--S~~ml~~A~~~~~----~~~~~~~~~~~~-~d~~~~  104 (225)
T d1im8a_          39 ADSNVYDLGCSRGA----ATLSARRNI-NQP-NVKIIG-IDN--SQPMVERCRQHIA----AYHSEIPVEILC-NDIRHV  104 (225)
T ss_dssp             TTCEEEEESCTTCH----HHHHHHHTC-CCS-SCEEEE-ECS--CHHHHHHHHHHHH----TSCCSSCEEEEC-SCTTTC
T ss_pred             CCCEEEEeccchhh----HHHHHHHhh-cCC-CCceEE-eCC--CHHHHHHHHHHhH----hhcccchhhhcc-chhhcc
Confidence            44589999999884    445566543 235 389999 985  8888888877764    445555555553 233333


Q ss_pred             ccCCCcEEEEeccccccccCCCcchHHHHHHHH-HhcCCCeEEEE
Q 043031          244 ETNEGEVVAVYSPVHLSHMIRKPNCLETFLTEL-RKINPCVMVVI  287 (424)
Q Consensus       244 ~~~~~E~laVN~~~~Lh~l~~~~~~~~~~L~~i-r~L~P~vvvl~  287 (424)
                      .  .++.-+|.|.+.|||+..  .....+|+.| |.|+|.-.++.
T Consensus       105 ~--~~~~d~i~~~~~l~~~~~--~d~~~~l~~i~~~LkpgG~li~  145 (225)
T d1im8a_         105 E--IKNASMVILNFTLQFLPP--EDRIALLTKIYEGLNPNGVLVL  145 (225)
T ss_dssp             C--CCSEEEEEEESCGGGSCG--GGHHHHHHHHHHHEEEEEEEEE
T ss_pred             c--cccceeeEEeeeccccCh--hhHHHHHHHHHHhCCCCceeec
Confidence            2  334445566677888742  3355778777 77899875555
>d1jqea_ c.66.1.19 (A:) Histamine methyltransferase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1qzza2 c.66.1.12 (A:102-357) Aclacinomycin-10-hydroxylase RdmB {Streptomyces purpurascens [TaxId: 1924]} Back     information, alignment and structure
>d1vl5a_ c.66.1.41 (A:) Hypothetical protein BH2331 {Bacillus halodurans [TaxId: 86665]} Back     information, alignment and structure
>d1xxla_ c.66.1.41 (A:) Hypothetical protein YcgJ {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1tw3a2 c.66.1.12 (A:99-351) Carminomycin 4-O-methyltransferase {Streptomyces peucetius [TaxId: 1950]} Back     information, alignment and structure
>d1ri5a_ c.66.1.34 (A:) mRNA cap (Guanine N-7) methyltransferase {Fungus (Encephalitozoon cuniculi) [TaxId: 6035]} Back     information, alignment and structure
>d2gh1a1 c.66.1.49 (A:13-293) Methyltransferase BC2162 {Bacillus cereus [TaxId: 1396]} Back     information, alignment and structure
>d1ve3a1 c.66.1.43 (A:2-227) Hypothetical protein PH0226 {Archaeon Pyrococcus horikoshii [TaxId: 53953]} Back     information, alignment and structure
>d1vlma_ c.66.1.41 (A:) Possible histamine N-methyltransferase TM1293 {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d2i6ga1 c.66.1.44 (A:1-198) Putative methyltransferase TehB {Salmonella typhimurium [TaxId: 90371]} Back     information, alignment and structure
>d2fk8a1 c.66.1.18 (A:22-301) Methoxy mycolic acid synthase 4, Mma4 {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d1nkva_ c.66.1.21 (A:) Hypothetical Protein YjhP {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2o57a1 c.66.1.18 (A:16-297) Putative sarcosine dimethylglycine methyltransferase {Red algae (Galdieria sulphuraria) [TaxId: 130081]} Back     information, alignment and structure
>d1y8ca_ c.66.1.43 (A:) Putative methyltransferase CAC2371 {Clostridium acetobutylicum [TaxId: 1488]} Back     information, alignment and structure
>d2ex4a1 c.66.1.42 (A:2-224) Adrenal gland protein AD-003 (C9orf32) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1fp1d2 c.66.1.12 (D:129-372) Chalcone O-methyltransferase {Alfalfa (Medicago sativa) [TaxId: 3879]} Back     information, alignment and structure
>d1wzna1 c.66.1.43 (A:1-251) Hypothetical methyltransferase PH1305 {Archaeon Pyrococcus horikoshii [TaxId: 53953]} Back     information, alignment and structure
>d1fp2a2 c.66.1.12 (A:109-352) Isoflavone O-methyltransferase {Alfalfa (Medicago sativa) [TaxId: 3879]} Back     information, alignment and structure
>d2avna1 c.66.1.41 (A:1-246) Hypothetical methyltransferase TM1389 {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1xtpa_ c.66.1.42 (A:) Hypothetical protein Lmaj004091aaa (LmjF30.0810) {Leishmania major [TaxId: 5664]} Back     information, alignment and structure
>d1xvaa_ c.66.1.5 (A:) Glycine N-methyltransferase {Rat (Rattus norvegicus) [TaxId: 10116]} Back     information, alignment and structure
>d1dusa_ c.66.1.4 (A:) Hypothetical protein MJ0882 {Archaeon Methanococcus jannaschii [TaxId: 2190]} Back     information, alignment and structure
>d1kyza2 c.66.1.12 (A:120-362) Caffeic acid/5-hydroxyferulic acid 3/5-O-methyltransferase {Alfalfa (Medicago sativa) [TaxId: 3879]} Back     information, alignment and structure