Citrus Sinensis ID: 043106
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 143 | ||||||
| 296081658 | 353 | unnamed protein product [Vitis vinifera] | 0.734 | 0.297 | 0.688 | 7e-33 | |
| 225429546 | 413 | PREDICTED: zinc transporter 4, chloropla | 0.748 | 0.259 | 0.675 | 9e-33 | |
| 147811926 | 379 | hypothetical protein VITISV_004232 [Viti | 0.741 | 0.279 | 0.682 | 1e-32 | |
| 255550788 | 419 | zinc/iron transporter, putative [Ricinus | 0.587 | 0.200 | 0.833 | 2e-32 | |
| 425918378 | 422 | zinc transporter 4 [Gossypium hirsutum] | 0.755 | 0.255 | 0.666 | 2e-32 | |
| 16304806 | 344 | putative Zn and Cd transporter [Noccaea | 0.685 | 0.284 | 0.755 | 4e-32 | |
| 7381054 | 378 | Zn and Cd transporter ZNT1 [Noccaea caer | 0.685 | 0.259 | 0.755 | 4e-32 | |
| 14582255 | 408 | ZIP-like zinc transporter [Noccaea caeru | 0.685 | 0.240 | 0.755 | 4e-32 | |
| 60592737 | 384 | ZIP family metal transporter [Thlaspi ja | 0.692 | 0.257 | 0.747 | 5e-32 | |
| 42493207 | 319 | Zn and Cd transporter [Noccaea caerulesc | 0.685 | 0.307 | 0.755 | 7e-32 |
| >gi|296081658|emb|CBI20663.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
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Score = 145 bits (365), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 73/106 (68%), Positives = 79/106 (74%), Gaps = 1/106 (0%)
Query: 36 DGDEESG-VWHVVVSQVLELGIVSHSIIIGISLGVSHSPCTIRPLIAALSFHQFFEGFAL 94
DGDEE G + HVVVSQVLELGI+SHS+IIG+SLGVS SPCTIRPLIAALSFHQFFEGFAL
Sbjct: 187 DGDEEDGGIRHVVVSQVLELGIISHSVIIGLSLGVSQSPCTIRPLIAALSFHQFFEGFAL 246
Query: 95 GGCIWQAQFNTQSATLMACFFRLNNSSRDQHRYCSCFSLQPKQPRC 140
GGCI QAQF T S TLMACFF + + S P PR
Sbjct: 247 GGCISQAQFKTLSTTLMACFFAITTPAGIAFGTAISSSYNPDSPRA 292
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Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225429546|ref|XP_002279424.1| PREDICTED: zinc transporter 4, chloroplastic-like [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|147811926|emb|CAN72575.1| hypothetical protein VITISV_004232 [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|255550788|ref|XP_002516442.1| zinc/iron transporter, putative [Ricinus communis] gi|223544262|gb|EEF45783.1| zinc/iron transporter, putative [Ricinus communis] | Back alignment and taxonomy information |
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| >gi|425918378|gb|AFY11956.1| zinc transporter 4 [Gossypium hirsutum] gi|425918380|gb|AFY11957.1| zinc transporter 4 [Gossypium hirsutum] | Back alignment and taxonomy information |
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| >gi|16304806|emb|CAC86389.1| putative Zn and Cd transporter [Noccaea caerulescens] | Back alignment and taxonomy information |
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| >gi|7381054|gb|AAF61374.1|AF133267_1 Zn and Cd transporter ZNT1 [Noccaea caerulescens] | Back alignment and taxonomy information |
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| >gi|14582255|gb|AAK69429.1|AF275751_1 ZIP-like zinc transporter [Noccaea caerulescens] | Back alignment and taxonomy information |
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| >gi|60592737|dbj|BAD90843.1| ZIP family metal transporter [Thlaspi japonicum] | Back alignment and taxonomy information |
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| >gi|42493207|gb|AAS17071.1| Zn and Cd transporter [Noccaea caerulescens] | Back alignment and taxonomy information |
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Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 143 | ||||||
| TAIR|locus:2206011 | 425 | IRT3 "iron regulated transport | 0.734 | 0.247 | 0.560 | 5.3e-25 | |
| TAIR|locus:2123787 | 344 | ZIP9 [Arabidopsis thaliana (ta | 0.657 | 0.273 | 0.5 | 8e-21 | |
| UNIPROTKB|Q6ZJ91 | 396 | ZIP4 "Zinc transporter 4" [Ory | 0.657 | 0.237 | 0.442 | 2.9e-15 | |
| UNIPROTKB|Q6L8G0 | 353 | ZIP5 "Zinc transporter 5" [Ory | 0.678 | 0.274 | 0.442 | 4.2e-15 | |
| UNIPROTKB|Q7XLD4 | 364 | ZIP3 "Zinc transporter 3" [Ory | 0.650 | 0.255 | 0.447 | 4.8e-15 | |
| UNIPROTKB|A3BI11 | 390 | ZIP8 "Zinc transporter 8" [Ory | 0.664 | 0.243 | 0.417 | 2.1e-13 | |
| TAIR|locus:2087705 | 355 | ZIP1 "zinc transporter 1 precu | 0.762 | 0.307 | 0.401 | 1.6e-12 | |
| UNIPROTKB|Q75HB1 | 374 | IRT1 "Fe(2+) transport protein | 0.678 | 0.259 | 0.384 | 3.9e-12 | |
| TAIR|locus:2174098 | 355 | ZIP12 "zinc transporter 12 pre | 0.678 | 0.273 | 0.366 | 7.3e-12 | |
| TAIR|locus:2207140 | 360 | ZIP5 "zinc transporter 5 precu | 0.664 | 0.263 | 0.415 | 3.5e-11 |
| TAIR|locus:2206011 IRT3 "iron regulated transporter 3" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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Score = 285 (105.4 bits), Expect = 5.3e-25, P = 5.3e-25
Identities = 60/107 (56%), Positives = 67/107 (62%)
Query: 11 KVLLTLANEAGHGHGQRLGHSHGFSDGDEESGVWHVVVSQVLEXXXXXXXXXXXXXXXXX 70
K+ + A+ GHGHG GH HG D +G H+VVSQVLE
Sbjct: 237 KIDIGHAHAHGHGHGHGHGHVHGGLDA--VNGARHIVVSQVLELGIVSHSIIIGLSLGVS 294
Query: 71 XXPCTIRPLIAALSFHQFFEGFALGGCIWQAQFNTQSATLMACFFRL 117
PCTIRPLIAALSFHQFFEGFALGGCI QAQF +SAT+MACFF L
Sbjct: 295 QSPCTIRPLIAALSFHQFFEGFALGGCISQAQFRNKSATIMACFFAL 341
|
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| TAIR|locus:2123787 ZIP9 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| UNIPROTKB|Q6ZJ91 ZIP4 "Zinc transporter 4" [Oryza sativa Japonica Group (taxid:39947)] | Back alignment and assigned GO terms |
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| UNIPROTKB|Q6L8G0 ZIP5 "Zinc transporter 5" [Oryza sativa Japonica Group (taxid:39947)] | Back alignment and assigned GO terms |
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| UNIPROTKB|Q7XLD4 ZIP3 "Zinc transporter 3" [Oryza sativa Japonica Group (taxid:39947)] | Back alignment and assigned GO terms |
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| UNIPROTKB|A3BI11 ZIP8 "Zinc transporter 8" [Oryza sativa Japonica Group (taxid:39947)] | Back alignment and assigned GO terms |
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| TAIR|locus:2087705 ZIP1 "zinc transporter 1 precursor" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| UNIPROTKB|Q75HB1 IRT1 "Fe(2+) transport protein 1" [Oryza sativa Japonica Group (taxid:39947)] | Back alignment and assigned GO terms |
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| TAIR|locus:2174098 ZIP12 "zinc transporter 12 precursor" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2207140 ZIP5 "zinc transporter 5 precursor" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 143 | |||
| TIGR00820 | 324 | TIGR00820, zip, ZIP zinc/iron transport family | 2e-41 | |
| PLN02159 | 337 | PLN02159, PLN02159, Fe(2+) transport protein | 4e-26 | |
| pfam02535 | 314 | pfam02535, Zip, ZIP Zinc transporter | 2e-21 |
| >gnl|CDD|233141 TIGR00820, zip, ZIP zinc/iron transport family | Back alignment and domain information |
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Score = 139 bits (353), Expect = 2e-41
Identities = 54/108 (50%), Positives = 68/108 (62%), Gaps = 1/108 (0%)
Query: 11 KVLLTLANEAGHGH-GQRLGHSHGFSDGDEESGVWHVVVSQVLELGIVSHSIIIGISLGV 69
KV AG G H ++ + + VV+QVLELGI+ HS++IG+SLG
Sbjct: 133 KVGDGEEGTAGGTKHGHEYYEDHVHTNSEVVQLLRQRVVAQVLELGIIVHSVVIGLSLGA 192
Query: 70 SHSPCTIRPLIAALSFHQFFEGFALGGCIWQAQFNTQSATLMACFFRL 117
S SP TI+PLIAALSFHQFFEG LGGCI QA+F +S T+M FF +
Sbjct: 193 SQSPDTIKPLIAALSFHQFFEGLGLGGCISQAEFKCKSVTIMCTFFAV 240
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The Zinc (Zn2+)-Iron (Fe2+) Permease (ZIP) Family (TC 2.A.5)Members of the ZIP family consist of proteins with eight putative transmembrane spanners. They are derived from animals, plants and yeast. Theycomprise a diverse family, with several paralogues in any one organism (e.g., at least five in Caenorabditis elegans, at least five in Arabidopsis thaliana and two inSaccharomyces cervisiae. The two S. cerevisiae proteins, Zrt1 and Zrt2, both probably transport Zn2+ with high specificity, but Zrt1 transports Zn2+ with ten-fold higher affinitythan Zrt2. Some members of the ZIP family have been shown to transport Zn2+ while others transport Fe2+, and at least one transports a range of metal ions. The energy source fortransport has not been characterized, but these systems probably function as secondary carriers [Transport and binding proteins, Cations and iron carrying compounds]. Length = 324 |
| >gnl|CDD|177818 PLN02159, PLN02159, Fe(2+) transport protein | Back alignment and domain information |
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| >gnl|CDD|217089 pfam02535, Zip, ZIP Zinc transporter | Back alignment and domain information |
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Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 143 | |||
| KOG1558 | 327 | consensus Fe2+/Zn2+ regulated transporter [Inorgan | 99.95 | |
| PLN02159 | 337 | Fe(2+) transport protein | 99.92 | |
| TIGR00820 | 324 | zip ZIP zinc/iron transport family. transport has | 99.92 | |
| PF02535 | 317 | Zip: ZIP Zinc transporter; InterPro: IPR003689 The | 99.82 | |
| PRK04201 | 265 | zinc transporter ZupT; Provisional | 99.55 | |
| COG0428 | 266 | Predicted divalent heavy-metal cations transporter | 99.3 | |
| KOG3907 | 303 | consensus ZIP-like zinc transporter proteins [Intr | 97.82 | |
| KOG2693 | 453 | consensus Putative zinc transporter [Inorganic ion | 96.95 | |
| KOG1558 | 327 | consensus Fe2+/Zn2+ regulated transporter [Inorgan | 94.96 | |
| PF02535 | 317 | Zip: ZIP Zinc transporter; InterPro: IPR003689 The | 92.32 | |
| KOG2474 | 406 | consensus Zinc transporter and related ZIP domain- | 89.39 | |
| PLN02159 | 337 | Fe(2+) transport protein | 87.9 | |
| TIGR00820 | 324 | zip ZIP zinc/iron transport family. transport has | 85.03 |
| >KOG1558 consensus Fe2+/Zn2+ regulated transporter [Inorganic ion transport and metabolism] | Back alignment and domain information |
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Probab=99.95 E-value=1.5e-28 Score=209.75 Aligned_cols=95 Identities=43% Similarity=0.632 Sum_probs=91.3
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhhccccCccchhhHHHHHHhhhhHHHHHHHHHHHhhccChhHHHHHHHHHHHhhHHHHH
Q 043106 45 HVVVSQVLELGIVSHSIIIGISLGVSHSPCTIRPLIAALSFHQFFEGFALGGCIWQAQFNTQSATLMACFFRLNNSSRDQ 124 (143)
Q Consensus 45 ~~~~~~vL~iaLs~HSvfeGlaLGv~~~~~~~~~L~~AI~~HK~~egfaLG~~L~~a~~~~~~~~l~~~iFsl~tPiGi~ 124 (143)
+++.+++|++||++||+|||+|+|+|++.+++|+|+.|+++||.+|||+||+||.++++++++.++|+++||++||+|++
T Consensus 173 ~~~~~~iL~lgi~~HSvfeGlalGv~~~~~ti~~L~~al~fHk~fegf~lG~~l~~a~~~~~~~~~~~~~fslttPiGi~ 252 (327)
T KOG1558|consen 173 SRLRSLILELGLSFHSVFEGLALGVQDSVSTIWTLFLALSFHKLFEGFGLGGCLLQAGFTFKSAVLMALFFSLTTPIGIA 252 (327)
T ss_pred hhHHHHHHHHHHHHHHHHHhhhccccCCHHHHHHHHHHHHHHHHHHHhcccHHHhhcccchHHHHHHHHHHHHHhHHHHH
Confidence 79999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhhhccccCCCCCCC
Q 043106 125 HRYCSCFSLQPKQPRC 140 (143)
Q Consensus 125 iG~~is~~~~~~s~~~ 140 (143)
+|++++++| +++|.+
T Consensus 253 iG~~i~~~~-~~s~~~ 267 (327)
T KOG1558|consen 253 LGIGISSSY-ENSPGA 267 (327)
T ss_pred HHHHhcccc-cCCchh
Confidence 999999998 666653
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| >PLN02159 Fe(2+) transport protein | Back alignment and domain information |
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| >TIGR00820 zip ZIP zinc/iron transport family | Back alignment and domain information |
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| >PF02535 Zip: ZIP Zinc transporter; InterPro: IPR003689 These ZIP zinc transporter proteins define a family of metal ion transporters that are found in plants, protozoa, fungi, invertebrates, and vertebrates, making it now possible to address questions of metal ion accumulation and homeostasis in diverse organisms [] | Back alignment and domain information |
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| >PRK04201 zinc transporter ZupT; Provisional | Back alignment and domain information |
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| >COG0428 Predicted divalent heavy-metal cations transporter [Inorganic ion transport and metabolism] | Back alignment and domain information |
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| >KOG3907 consensus ZIP-like zinc transporter proteins [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
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| >KOG2693 consensus Putative zinc transporter [Inorganic ion transport and metabolism] | Back alignment and domain information |
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| >KOG1558 consensus Fe2+/Zn2+ regulated transporter [Inorganic ion transport and metabolism] | Back alignment and domain information |
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| >PF02535 Zip: ZIP Zinc transporter; InterPro: IPR003689 These ZIP zinc transporter proteins define a family of metal ion transporters that are found in plants, protozoa, fungi, invertebrates, and vertebrates, making it now possible to address questions of metal ion accumulation and homeostasis in diverse organisms [] | Back alignment and domain information |
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| >KOG2474 consensus Zinc transporter and related ZIP domain-containing proteins [Inorganic ion transport and metabolism] | Back alignment and domain information |
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| >PLN02159 Fe(2+) transport protein | Back alignment and domain information |
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| >TIGR00820 zip ZIP zinc/iron transport family | Back alignment and domain information |
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Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
No hit with e-value below 0.005
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
No hit with probability above 80.00
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
No hit with probability above 80.00