Citrus Sinensis ID: 043160

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330---
Protein Sequence
MILQYHHAKPYLGVIFMQFCSSIMSIITKIALTQGMSQHVLVAYRMVVATSLIAPFAIVLERKTRPKMTFRIFAKIALLGLFEPVIGQNLYFTGLKCSTATFTVAMCNILPALTFLMAWIFRLEKVKIKSMRSQAKILGTIVTAGGAMCMTLLKGPILEFPWKQVRILHNQSETGTHNKEEHITKGALMIAAGCFSWSCFIILEAFLLKSYPAELSLTALMCFVSSVEGTILALAIERGNTGIWLLHFDAKLLSVLYGGFVSCTAYFIMGWLMKRKGPVFVSSFNPLSMVIIAILGSFFIAEELFLGRIVGAIVIVIGLYMVLWGRSKDQSPS
Secondary Structure (PSIPRED)
ccccccccHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHcccEEEcEEHHcccccccHHHHHHHHcccHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHccccccccccHHHHHcccccccccccccccccccHHHHHcccHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHEEEccccccccccccccEEHHEEHHHHHHHHHHHHHHHHHccccEEEEEcccHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHEEEccccccccc
Secondary Structure Prediction (SSPRO)
ccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHEHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHcccccHEEEcccHHHHHHHHHHHHHHHHHHHHHHHHHccccEEEEcHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccc
Coil and Loop (DISEMBL)
milqyhhakpylGVIFMQFCSSIMSIITKIALTQGMSQHVLVAYRMVVATSLIAPFAivlerktrpkmTFRIFAKIALLglfepvigqnlyftglkcstATFTVAMCNILPALTFLMAWIFRLEKVKIKSMRSQAKILGTIVTAGGAMCMTLlkgpilefpwkqVRILhnqsetgthnkeehITKGALMIAAGCFSWSCFIILEAFLLKSYPAELSLTALMCFVSSVEGTILALAIERGNTGIWLLHFDAKLLSVLYGGFVSCTAYFIMGWLmkrkgpvfvssfnPLSMVIIAILGSFFIAEELFLGRIVGAIVIVIGLYMVLwgrskdqsps
Flexible Loop (DISEMBL)
MILQYHHAKPYLGVIFMQFCSSIMSIITKIALTQGMSQHVLVAYRMVVATSLIAPfaivlerktrpKMTFRIFAKIALLGLFEPVIGQNLYFTGLKCSTATFTVAMCNILPALTFLMAWIFRLEKVKIKSMRSQAKILGTIVTAGGAMCMTLLKGPILEFPWKQVRILHNQSETGTHNKEEHITKGALMIAAGCFSWSCFIILEAFLLKSYPAELSLTALMCFVSSVEGTILALAIERGNTGIWLLHFDAKLLSVLYGGFVSCTAYFIMGWLMKRKGPVFVSSFNPLSMVIIAILGSFFIAEELFLGRIVGAIVIVIGLYMVLwgrskdqsps
Low Complexity Region (SEG)
MILQYHHAKPYLGVIFMQFCSSIMSIITKIALTQGMSQHVLVAYRMVVATSLIAPFAIVLERKTRPKMTFRIFAKIALLGLFEPVIGQNLYFTGLKCSTATFTVAMCNILPALTFLMAWIFRLEKVKIKSMRSQAKILGTIVTAGGAMCMTLLKGPILEFPWKQVRILHNQSETGTHNKEEHITKGALMIAAGCFSWSCFIILEAFLLKSYPAELSLTALMCFVSSVEGTILALAIERGNTGIWLLHFDAKLLSVLYGGFVSCTAYFIMGWLMKRKGPVFVSSFNPLSMVIIAILGSFFIAEELFLgrivgaivivigLYMVLWGRSKDQSPS
Disordered region (IsUnstruct)
**LQYHHAKPYLGVIFMQFCSSIMSIITKIALTQGMSQHVLVAYRMVVATSLIAPFAIVLERKTRPKMTFRIFAKIALLGLFEPVIGQNLYFTGLKCSTATFTVAMCNILPALTFLMAWIFRLEKVKIKSMRSQAKILGTIVTAGGAMCMTLLKGPILEFPWKQVRILHNQS*******EEHITKGALMIAAGCFSWSCFIILEAFLLKSYPAELSLTALMCFVSSVEGTILALAIERGNTGIWLLHFDAKLLSVLYGGFVSCTAYFIMGWLMKRKGPVFVSSFNPLSMVIIAILGSFFIAEELFLGRIVGAIVIVIGLYMVLWG********
Disordered Region (DISOPRED)
********KPYLGVIFMQFCSSIMSIITKIALTQGMSQHVLVAYRMVVATSLIAPFAIVLERKTRPKMTFRIFAKIALLGLFEPVIGQNLYFTGLKCSTATFTVAMCNILPALTFLMAWIFRLEKVKIKSMRSQAKILGTIVTAGGAMCMTLLKGPILEFPWKQVR************KEEHITKGALMIAAGCFSWSCFIILEAFLLKSYPAELSLTALMCFVSSVEGTILALAIERGNTGIWLLHFDAKLLSVLYGGFVSCTAYFIMGWLMKRKGPVFVSSFNPLSMVIIAILGSFFIAEELFLGRIVGAIVIVIGLYMVL***S******
Disordered Region (DISEMBL)
MILQYHHAKPYLGVIFMQFCSSIMSIITKIALTQGMSQHVLVAYRMVVATSLIAPFAIVLERKTRPKMTFRIFAKIALLGLFEPVIGQNLYFTGLKCSTATFTVAMCNILPALTFLMAWIFRLEKVKIKSMRSQAKILGTIVTAGGAMCMTLLKGPILEFPWKQVRILHNQSETGTHNKEEHITKGALMIAAGCFSWSCFIILEAFLLKSYPAELSLTALMCFVSSVEGTILALAIERGNTGIWLLHFDAKLLSVLYGGFVSCTAYFIMGWLMKRKGPVFVSSFNPLSMVIIAILGSFFIAEELFLGRIVGAIVIVIGLYMVLWGRSKDQSPS
Disordered Region (DISPRO)
*ILQYHHAKPYLGVIFMQFCSSIMSIITKIALTQGMSQHVLVAYRMVVATSLIAPFAIVLERKTRPKMTFRIFAKIALLGLFEPVIGQNLYFTGLKCSTATFTVAMCNILPALTFLMAWIFRLEKVKIKSMRSQAKILGTIVTAGGAMCMTLLKGPILEFPWK******************HITKGALMIAAGCFSWSCFIILEAFLLKSYPAELSLTALMCFVSSVEGTILALAIERGNTGIWLLHFDAKLLSVLYGGFVSCTAYFIMGWLMKRKGPVFVSSFNPLSMVIIAILGSFFIAEELFLGRIVGAIVIVIGLYMVLWGRS******
Transmembrane Helix (TMHMM)
iiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHiiiiiiiii
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiHHHHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHiiiiiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MILQYHHAKPYLGVIFMQFCSSIMSIITKIALTQGMSQHVLVAYRMVVATSLIAPFAIVLERKTRPKMTFRIFAKIALLGLFEPVIGQNLYFTGLKCSTATFTVAMCNILPALTFLMAWIFRLEKVKIKSMRSQAKILGTIVTAGGAMCMTLLKGPILEFPWKQVRILHNQSETGTHNKEEHITKGALMIAAGCFSWSCFIILEAFLLKSYPAELSLTALMCFVSSVEGTILALAIERGNTGIWLLHFDAKLLSVLYGGFVSCTAYFIMGWLMKRKGPVFVSSFNPLSMVIIAILGSFFIAEELFLGRIVGAIVIVIGLYMVLWGRSKDQSPS
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	333	2.2.26 [Sep-21-2011]
O80638	374	WAT1-related protein At2g	yes	no	0.966	0.860	0.596	1e-109
Q9FNA5	377	WAT1-related protein At5g	no	no	0.984	0.870	0.528	1e-106
Q9ZUS1	380	WAT1-related protein At2g	no	no	0.960	0.842	0.495	7e-94
Q9SUF1	384	WAT1-related protein At4g	no	no	0.963	0.835	0.440	7e-82
F4HZQ7	389	WAT1-related protein At1g	no	no	0.963	0.825	0.460	9e-81
Q9FL41	402	WAT1-related protein At5g	no	no	0.966	0.800	0.439	3e-78
Q501F8	373	WAT1-related protein At4g	no	no	0.963	0.860	0.447	6e-75
Q9LPF1	370	WAT1-related protein At1g	no	no	0.951	0.856	0.443	7e-75
F4IQX1	336	WAT1-related protein At2g	no	no	0.909	0.901	0.436	9e-71
F4IJ08	394	WAT1-related protein At2g	no	no	0.948	0.802	0.406	1e-69

>sp|O80638|WTR14_ARATH WAT1-related protein At2g39510 OS=Arabidopsis thaliana GN=At2g39510 PE=2 SV=1

 Score =  395 bits (1016), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 195/327 (59%), Positives = 246/327 (75%), Gaps = 5/327 (1%)

Query: 9   KPYLGVIFMQFCSSIMSIITKIALTQGMSQHVLVAYRMVVATSLIAPFAIVLERKTRPKM 68
           KP++ V+ +QF  + +SII K AL QGMS HVL +YR +VAT  IAPFA  L+RK RPKM
Sbjct: 7   KPFITVVSLQFGYAGLSIIAKFALNQGMSPHVLASYRHIVATIFIAPFAYFLDRKIRPKM 66

Query: 69  TFRIFAKIALLGLFEPVIGQNLYFTGLKCSTATFTVAMCNILPALTFLMAWIFRLEKVKI 128
           T  IF KI LLGL EP I QNLY+TG+K ++ATFT AM N+LPA  F+MAWIFRLEKV +
Sbjct: 67  TLSIFFKILLLGLLEPTIDQNLYYTGMKYTSATFTAAMTNVLPAFAFIMAWIFRLEKVNV 126

Query: 129 KSMRSQAKILGTIVTAGGAMCMTLLKGPILEFPWKQVRILH-NQSETGTHNKEEHITKGA 187
           K + SQAKILGTIVT GGAM MT++KGP++  PW     +H + S TG    ++ +TKGA
Sbjct: 127 KKIHSQAKILGTIVTVGGAMLMTVVKGPLIPLPWANPHDIHQDSSNTGV---KQDLTKGA 183

Query: 188 LMIAAGCFSWSCFIILEAFLLKSYPAELSLTALMCFVSSVEGTILALAIERGNTGIWLLH 247
            +IA GC  W+ FI L+A  LKSYP ELSLTA +CF+ S+E TI+AL IERGN   W +H
Sbjct: 184 SLIAIGCICWAGFINLQAITLKSYPVELSLTAYICFLGSIESTIVALFIERGNPSAWAIH 243

Query: 248 FDAKLLSVLYGGFV-SCTAYFIMGWLMKRKGPVFVSSFNPLSMVIIAILGSFFIAEELFL 306
            D+KLL+ +YGG + S   Y++ G +MK +GPVFV++FNPLSMVI+AILGS  +AE +FL
Sbjct: 244 LDSKLLAAVYGGVICSGIGYYVQGVIMKTRGPVFVTAFNPLSMVIVAILGSIILAEVMFL 303

Query: 307 GRIVGAIVIVIGLYMVLWGRSKDQSPS 333
           GRI+GAIVIV+GLY VLWG+SKD+  S
Sbjct: 304 GRILGAIVIVLGLYSVLWGKSKDEPSS 330

Arabidopsis thaliana (taxid: 3702)

>sp|Q9FNA5|WTR39_ARATH WAT1-related protein At5g13670 OS=Arabidopsis thaliana GN=At5g13670 PE=2 SV=1

 Score =  384 bits (986), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 174/329 (52%), Positives = 252/329 (76%), Gaps = 1/329 (0%)

Query: 3   LQYHHAKPYLGVIFMQFCSSIMSIITKIALTQGMSQHVLVAYRMVVATSLIAPFAIVLER 62
           +++  A+P++ ++F+Q   ++MSI+ K+AL +GMS HVLVAYRM VA++LI PFA++LER
Sbjct: 1   MKFERARPFIAIVFIQCLYALMSIVAKLALNKGMSPHVLVAYRMAVASALITPFALILER 60

Query: 63  KTRPKMTFRIFAKIALLGLFEPVIGQNLYFTGLKCSTATFTVAMCNILPALTFLMAWIFR 122
            TRPK+TF+I  +IA+L LFEPV+ QNLY++G+K +TATFT A+CN LPA+TF+MA +F+
Sbjct: 61  NTRPKLTFKILLQIAILSLFEPVVEQNLYYSGMKLTTATFTSALCNALPAMTFIMACVFK 120

Query: 123 LEKVKIKSMRSQAKILGTIVTAGGAMCMTLLKGPILEFPW-KQVRILHNQSETGTHNKEE 181
           LEKV I+   SQAK++GT+V  GGAM MT +KG ++E PW    R L+  +      K+ 
Sbjct: 121 LEKVTIERRHSQAKLVGTMVAIGGAMLMTFVKGNVIELPWTSNSRGLNGHTHAMRIPKQA 180

Query: 182 HITKGALMIAAGCFSWSCFIILEAFLLKSYPAELSLTALMCFVSSVEGTILALAIERGNT 241
            I +G++M+ A CFSWSC+IIL+A +L  Y AELSLTALMC +  +E T++ L  ER N 
Sbjct: 181 DIARGSIMLVASCFSWSCYIILQAKILAQYKAELSLTALMCIMGMLEATVMGLIWERKNM 240

Query: 242 GIWLLHFDAKLLSVLYGGFVSCTAYFIMGWLMKRKGPVFVSSFNPLSMVIIAILGSFFIA 301
            +W ++ D  LL+ +YGG VS  AY+++GW  K +GPVFVS+FNPLSMV++AIL +F   
Sbjct: 241 SVWKINPDVTLLASIYGGLVSGLAYYVIGWASKERGPVFVSAFNPLSMVLVAILSTFVFL 300

Query: 302 EELFLGRIVGAIVIVIGLYMVLWGRSKDQ 330
           E++++GR++G++VIVIG+Y+VLWG+SKD+
Sbjct: 301 EKVYVGRVIGSVVIVIGIYLVLWGKSKDK 329

Arabidopsis thaliana (taxid: 3702)

>sp|Q9ZUS1|WTR13_ARATH WAT1-related protein At2g37460 OS=Arabidopsis thaliana GN=At2g37460 PE=2 SV=1

 Score =  344 bits (882), Expect = 7e-94,   Method: Compositional matrix adjust.
 Identities = 161/325 (49%), Positives = 237/325 (72%), Gaps = 5/325 (1%)

Query: 6   HHAKPYLGVIFMQFCSSIMSIITKIALTQGMSQHVLVAYRMVVATSLIAPFAIVLERKTR 65
             A+P++ ++ +Q   + M I++K  L +GMS +VLV YR  VAT ++APFA   ++K R
Sbjct: 11  EKARPFISMVVLQVGLAGMDILSKAVLNKGMSNYVLVVYRHAVATIVMAPFAFYFDKKVR 70

Query: 66  PKMTFRIFAKIALLGLFEPVIGQNLYFTGLKCSTATFTVAMCNILPALTFLMAWIFRLEK 125
           PKMT  IF KI+LLGL EPVI QNLY+ G+K +TATF  AM N+LPA+TF++A+IF LE+
Sbjct: 71  PKMTLMIFFKISLLGLLEPVIDQNLYYLGMKYTTATFATAMYNVLPAITFVLAYIFGLER 130

Query: 126 VKIKSMRSQAKILGTIVTAGGAMCMTLLKGPILEFPWKQVRILHNQSETGTHNKEEHITK 185
           VK++ +RS  K++GT+ T GGAM MTL+KGP+L+  W +    HN + T  H+      K
Sbjct: 131 VKLRCIRSTGKVVGTLATVGGAMIMTLVKGPVLDLFWTKGVSAHNTAGTDIHSA----IK 186

Query: 186 GALMIAAGCFSWSCFIILEAFLLKSYPAELSLTALMCFVSSVEGTILALAIERGNTGIWL 245
           GA+++  GCFS++CF+IL+A  L++YPAELSLTA +C + ++EGT +AL +E+GN   W 
Sbjct: 187 GAVLVTIGCFSYACFMILQAITLRTYPAELSLTAWICLMGTIEGTAVALVMEKGNPSAWA 246

Query: 246 LHFDAKLLSVLYGGFV-SCTAYFIMGWLMKRKGPVFVSSFNPLSMVIIAILGSFFIAEEL 304
           + +D KLL+  Y G V S  AY++ G +MK +GPVFV++F+PL M+I+AI+ +   AE++
Sbjct: 247 IGWDTKLLTATYSGIVCSALAYYVGGVVMKTRGPVFVTAFSPLCMIIVAIMSTIIFAEQM 306

Query: 305 FLGRIVGAIVIVIGLYMVLWGRSKD 329
           +LGR++GA+VI  GLY+V+WG+ KD
Sbjct: 307 YLGRVLGAVVICAGLYLVIWGKGKD 331

Arabidopsis thaliana (taxid: 3702)

>sp|Q9SUF1|WTR31_ARATH WAT1-related protein At4g08290 OS=Arabidopsis thaliana GN=At4g08290 PE=2 SV=1

 Score =  304 bits (778), Expect = 7e-82,   Method: Compositional matrix adjust.
 Identities = 144/327 (44%), Positives = 222/327 (67%), Gaps = 6/327 (1%)

Query: 6   HHAKPYLGVIFMQFCSSIMSIITKIALTQGMSQHVLVAYRMVVATSLIAPFAIVLERKTR 65
           H  +PYL +IF+QF ++   I+    L QG +++V++ YR +VA  ++APFA++ ERK R
Sbjct: 9   HKLRPYLLMIFLQFGAAGTYIVIMATLNQGQNRYVVIVYRNLVAALVLAPFALIFERKVR 68

Query: 66  PKMTFRIFAKIALLGLFEPVIGQNLYFTGLKCSTATFTVAMCNILPALTFLMAWIFRLEK 125
           PKMT  +  KI  LG  EPV+ Q   + G+  ++AT+T A+ NILP++TF++AWI R+EK
Sbjct: 69  PKMTLSVLWKIMALGFLEPVLDQGFGYLGMNMTSATYTSAIMNILPSVTFIIAWILRMEK 128

Query: 126 VKIKSMRSQAKILGTIVTAGGAMCMTLLKGPILEFPWKQVRILHNQSETGTHNKEEHIT- 184
           V I  +RS+AKI+GT+V  GGA+ MTL KGP++  PW    +  +Q    T+N ++H   
Sbjct: 129 VNIAEVRSKAKIIGTLVGLGGALVMTLYKGPLIPLPWSNPNM--DQQNGHTNNSQDHNNW 186

Query: 185 -KGALMIAAGCFSWSCFIILEAFLLKSYPAELSLTALMCFVSSVEGTILALAIERGNTGI 243
             G L+I  GC +WS F +L++  +K+YPA+LSL+AL+C   +V+   +AL +ER  +G 
Sbjct: 187 VVGTLLILLGCVAWSGFYVLQSITIKTYPADLSLSALICLAGAVQSFAVALVVERHPSG- 245

Query: 244 WLLHFDAKLLSVLYGGFVSC-TAYFIMGWLMKRKGPVFVSSFNPLSMVIIAILGSFFIAE 302
           W + +DA+L + LY G VS    Y++ G +MK +GPVFV++FNPL M+++A++ SF + E
Sbjct: 246 WAVGWDARLFAPLYTGIVSSGITYYVQGMVMKTRGPVFVTAFNPLCMILVALIASFILHE 305

Query: 303 ELFLGRIVGAIVIVIGLYMVLWGRSKD 329
           ++  G ++G  VI  GLYMV+WG+ KD
Sbjct: 306 QIHFGCVIGGAVIAAGLYMVVWGKGKD 332

Arabidopsis thaliana (taxid: 3702)

>sp|F4HZQ7|WTR5_ARATH WAT1-related protein At1g21890 OS=Arabidopsis thaliana GN=At1g21890 PE=2 SV=1

 Score =  300 bits (768), Expect = 9e-81,   Method: Compositional matrix adjust.
 Identities = 152/330 (46%), Positives = 217/330 (65%), Gaps = 9/330 (2%)

Query: 9   KPYLGVIFMQFCSSIMSIITKIALTQGMSQHVLVAYRMVVATSLIAPFAIVLERKTRPKM 68
           KPYL +I MQF  + M IIT ++L  GM+ +VL  YR  +AT++IAPFA+  ERK RPKM
Sbjct: 10  KPYLAMISMQFGYAGMYIITMVSLKHGMNHYVLAVYRHAIATAVIAPFALFHERKIRPKM 69

Query: 69  TFRIFAKIALLGLFEPVIGQNLYFTGLKCSTATFTVAMCNILPALTFLMAWIFRLEKVKI 128
           TFRIF +IALLG  EPV+ QNLY+ G+  ++ATF  A  N+LPA+TF++A IFRLE V  
Sbjct: 70  TFRIFLQIALLGFIEPVLDQNLYYVGMTYTSATFASATANVLPAITFVLAIIFRLESVNF 129

Query: 129 KSMRSQAKILGTIVTAGGAMCMTLLKGPILEF-------PWKQVRILHNQSETGTHNKEE 181
           K +RS AK++GT++T  GA+ MTL KGPI++F                +    G    ++
Sbjct: 130 KKVRSIAKVVGTVITVSGALLMTLYKGPIVDFIRFGGGGGGGSDGAGGSHGGAGAAAMDK 189

Query: 182 HITKGALMIAAGCFSWSCFIILEAFLLKSYPAELSLTALMCFVSSVEGTILALAIERGNT 241
           H   G LM+    F W+ F IL++F LK YPAELSLT L+C + ++EGT ++L   R + 
Sbjct: 190 HWIPGTLMLLGRTFGWAGFFILQSFTLKQYPAELSLTTLICLMGTLEGTAVSLVTVR-DL 248

Query: 242 GIWLLHFDAKLLSVLYGGFV-SCTAYFIMGWLMKRKGPVFVSSFNPLSMVIIAILGSFFI 300
             W + FD+ L +  Y G + S  AY++ G +M+ +GPVFV++FNPL +VI A LG   +
Sbjct: 249 SAWKIGFDSNLFAAAYSGVICSGVAYYVQGVVMRERGPVFVATFNPLCVVITAALGVVVL 308

Query: 301 AEELFLGRIVGAIVIVIGLYMVLWGRSKDQ 330
           +E + LG ++G + I++GLY V+WG+ KD+
Sbjct: 309 SESIHLGSVIGTLFIIVGLYTVVWGKGKDK 338

Arabidopsis thaliana (taxid: 3702)

>sp|Q9FL41|WTR38_ARATH WAT1-related protein At5g07050 OS=Arabidopsis thaliana GN=At5g07050 PE=2 SV=1

 Score =  291 bits (746), Expect = 3e-78,   Method: Compositional matrix adjust.
 Identities = 145/330 (43%), Positives = 224/330 (67%), Gaps = 8/330 (2%)

Query: 8   AKPYLGVIFMQFCSSIMSIITKIALTQGMSQHVLVAYRMVVATSLIAPFAIVLERKTRPK 67
           +KPY  +I +QF  + M+IITKI+L  GMS +VLV YR  +AT++IAPFA   ERK +PK
Sbjct: 16  SKPYFAMISLQFGYAGMNIITKISLNTGMSHYVLVVYRHAIATAVIAPFAFFFERKAQPK 75

Query: 68  MTFRIFAKIALLGLFEPVIGQNLYFTGLKCSTATFTVAMCNILPALTFLMAWIFRLEKVK 127
           +TF IF ++ +LGL  PVI QN Y+ GLK ++ TF+ AM N+LPA+TF++A +FR+E + 
Sbjct: 76  ITFSIFMQLFILGLLGPVIDQNFYYMGLKYTSPTFSCAMSNMLPAMTFILAVLFRMEMLD 135

Query: 128 IKSMRSQAKILGTIVTAGGAMCMTLLKGPILEFPWKQVRILHNQSET-----GTHNKEEH 182
           +K +  QAKI GT+VT  GAM MT+ KGPI+E  W +   + + S          + ++ 
Sbjct: 136 LKKLWCQAKIAGTVVTVAGAMLMTIYKGPIVELFWTKYMHIQDSSHANTTSSKNSSSDKE 195

Query: 183 ITKGALMIAAGCFSWSCFIILEAFLLKSYPA-ELSLTALMCFVSSVEGTILALAIERGNT 241
             KG++++     +W+   +L+A +LK+Y   +LSLT L+CF+ +++   +   +E  N 
Sbjct: 196 FLKGSILLIFATLAWASLFVLQAKILKTYAKHQLSLTTLICFIGTLQAVAVTFVMEH-NP 254

Query: 242 GIWLLHFDAKLLSVLYGGFV-SCTAYFIMGWLMKRKGPVFVSSFNPLSMVIIAILGSFFI 300
             W + +D  LL+  Y G V S  +Y++ G +MK++GPVF ++F+PL MVI+A++GSF +
Sbjct: 255 SAWRIGWDMNLLAAAYSGIVASSISYYVQGIVMKKRGPVFATAFSPLMMVIVAVMGSFVL 314

Query: 301 AEELFLGRIVGAIVIVIGLYMVLWGRSKDQ 330
           AE++FLG ++GA++IVIGLY VLWG+ K+ 
Sbjct: 315 AEKIFLGGVIGAVLIVIGLYAVLWGKQKEN 344

Arabidopsis thaliana (taxid: 3702)

>sp|Q501F8|WTR32_ARATH WAT1-related protein At4g08300 OS=Arabidopsis thaliana GN=At4g08300 PE=2 SV=1

 Score =  281 bits (718), Expect = 6e-75,   Method: Compositional matrix adjust.
 Identities = 145/324 (44%), Positives = 211/324 (65%), Gaps = 3/324 (0%)

Query: 9   KPYLGVIFMQFCSSIMSIITKIALTQGMSQHVLVAYRMVVATSLIAPFAIVLERKTRPKM 68
           KP + +I +QF  + M IIT ++   GM+  +L  YR VVAT +IAPFA++LERK RPKM
Sbjct: 10  KPIIAIISLQFGYAGMYIITMVSFKHGMNHWILATYRHVVATIVIAPFALILERKIRPKM 69

Query: 69  TFRIFAKIALLGLFEPVIGQNLYFTGLKCSTATFTVAMCNILPALTFLMAWIFRLEKVKI 128
           T+ +F +I  LG  EP++ QNLY+ G+K ++AT++ A  N LPA+TF+MA IFR+E V +
Sbjct: 70  TWPLFLRILALGFLEPLLDQNLYYIGMKATSATYSSAFVNALPAITFIMAVIFRIETVNL 129

Query: 129 KSMRSQAKILGTIVTAGGAMCMTLLKGPILEFPWKQVRILHNQSE-TGTHNKEEHITKGA 187
           K  RS AK++GT +T GGAM MTL KGP +E        LH  S  T +   +++   G 
Sbjct: 130 KKTRSLAKVIGTAITVGGAMVMTLYKGPAIELFKTAHSSLHGGSSGTSSETTDQNWVTGT 189

Query: 188 LMIAAGCFSWSCFIILEAFLLKSYPAELSLTALMCFVSSVEGTILALAIERGNTGIWLLH 247
           L +     +W+ F IL++F LK YPAELSL   +C + +V  TI +L + R +   W + 
Sbjct: 190 LAVMGSITTWAGFFILQSFTLKKYPAELSLVMWICAMGTVLNTIASLIMVR-DVSAWKVG 248

Query: 248 FDAKLLSVLYGGFV-SCTAYFIMGWLMKRKGPVFVSSFNPLSMVIIAILGSFFIAEELFL 306
            D+  L+ +Y G V S  AY+I   +++ +GPVF +SF+P+ M+I A LG   +AE++ L
Sbjct: 249 MDSGTLAAVYSGVVCSGMAYYIQSIVIRERGPVFTTSFSPMCMIITAFLGVLVLAEKIHL 308

Query: 307 GRIVGAIVIVIGLYMVLWGRSKDQ 330
           G I+GAI IV GLY V+WG++KD+
Sbjct: 309 GSIIGAIFIVFGLYSVVWGKAKDE 332

Arabidopsis thaliana (taxid: 3702)

>sp|Q9LPF1|WTR8_ARATH WAT1-related protein At1g44800 OS=Arabidopsis thaliana GN=At1g44800 PE=1 SV=1

 Score =  281 bits (718), Expect = 7e-75,   Method: Compositional matrix adjust.
 Identities = 144/325 (44%), Positives = 213/325 (65%), Gaps = 8/325 (2%)

Query: 9   KPYLGVIFMQFCSSIMSIITKIALTQGMSQHVLVAYRMVVATSLIAPFAIVLERKTRPKM 68
           KP L +I +QF  + M IIT ++   GM   VL  YR VVAT ++APFA++ ERK RPKM
Sbjct: 10  KPILAIISLQFGYAGMYIITMVSFKHGMDHWVLATYRHVVATVVMAPFALMFERKIRPKM 69

Query: 69  TFRIFAKIALLGLFEPVIGQNLYFTGLKCSTATFTVAMCNILPALTFLMAWIFRLEKVKI 128
           T  IF ++  LG+ EP++ QNLY+ GLK ++A++T A  N LPA+TF++A IFRLE V  
Sbjct: 70  TLAIFWRLLALGILEPLMDQNLYYIGLKNTSASYTSAFTNALPAVTFILALIFRLETVNF 129

Query: 129 KSMRSQAKILGTIVTAGGAMCMTLLKGPILEFPWKQVRILHNQSETGTHNKE--EHITKG 186
           + + S AK++GT++T GGAM MTL KGP +E     V+  HN    G+ +    +H   G
Sbjct: 130 RKVHSVAKVVGTVITVGGAMIMTLYKGPAIEI----VKAAHNSFHGGSSSTPTGQHWVLG 185

Query: 187 ALMIAAGCFSWSCFIILEAFLLKSYPAELSLTALMCFVSSVEGTILALAIERGNTGIWLL 246
            + I     +W+ F IL+++ LK YPAELSL  L+C + ++   I +L + R +   W +
Sbjct: 186 TIAIMGSISTWAAFFILQSYTLKVYPAELSLVTLICGIGTILNAIASLIMVR-DPSAWKI 244

Query: 247 HFDAKLLSVLYGGFV-SCTAYFIMGWLMKRKGPVFVSSFNPLSMVIIAILGSFFIAEELF 305
             D+  L+ +Y G V S  AY+I   ++K++GPVF +SF+P+ M+I A LG+  +AE++ 
Sbjct: 245 GMDSGTLAAVYSGVVCSGIAYYIQSIVIKQRGPVFTTSFSPMCMIITAFLGALVLAEKIH 304

Query: 306 LGRIVGAIVIVIGLYMVLWGRSKDQ 330
           LG I+GA+ IV+GLY V+WG+SKD+
Sbjct: 305 LGSIIGAVFIVLGLYSVVWGKSKDE 329

Arabidopsis thaliana (taxid: 3702)

>sp|F4IQX1|WTR12_ARATH WAT1-related protein At2g37450 OS=Arabidopsis thaliana GN=At2g37450 PE=2 SV=1

 Score =  267 bits (682), Expect = 9e-71,   Method: Compositional matrix adjust.
 Identities = 144/330 (43%), Positives = 213/330 (64%), Gaps = 27/330 (8%)

Query: 6   HHAKPYLGVIFMQFCSSIMSIITKIALTQGMSQHVLVAYRMVVATSLIAPFAIVLERKTR 65
             A P++ ++ +Q   + M I+TK  L +GMS +VL  YR  VAT ++APFA   +    
Sbjct: 5   KKALPFILMVLLQIGYAGMDILTKDVLNKGMSIYVLSVYRHGVATVVMAPFAFYFD---- 60

Query: 66  PKMTFRIFAKIALLGLFEPVIGQNLYFTGLKCSTATFTVAMCNILPALTFLMAWIFRLEK 125
                             PVI QNL+  G+K +TATF +A+ N LPA+TF++A IFRLE 
Sbjct: 61  -----------------NPVIAQNLFNLGMKYTTATFAIALYNTLPAVTFILALIFRLES 103

Query: 126 VKIKSMRSQAKILGTIVTAGGAMCMTLLKGPILEFPWKQVRILHNQSETGTHNKEEHITK 185
           VK +S+RS AK++GT+ T GG M MTL+KGP L+  W +     N   T  H+      K
Sbjct: 104 VKFQSIRSAAKVVGTVTTVGGIMVMTLVKGPALDLFWTKGPSAQNTVGTDIHSS----IK 159

Query: 186 GALMIAAGCFSWSCFIILEAFLLKSYPAELSLTALMCFVSSVEGTILALAIERGNTGIWL 245
           GA+++  GCFS++CF+IL+A  LK+YPAELSL   +C + ++EG ++AL +E+GN  +W 
Sbjct: 160 GAVLVTIGCFSYACFMILQAITLKTYPAELSLATWICLIGTIEGVVVALVMEKGNPSVWA 219

Query: 246 LHFDAKLLSVLYGGFV-SCTAYFIMGWLMKRKGPVFVSSFNPLSMVIIAILGSFFIAEEL 304
           + +D KLL++ Y G V S   Y+I G +MK +GPVFV++F PL M+++AI+ S    E++
Sbjct: 220 IGWDTKLLTITYSGIVCSALGYYIGGVVMKTRGPVFVTAFKPLCMIVVAIMSSIIFDEQM 279

Query: 305 FLGRIVGAIVIVIGLYMVLWGRSKD-QSPS 333
           +LGR +GA VI +GLY+V+WG++KD + PS
Sbjct: 280 YLGRALGATVICVGLYLVIWGKAKDYEYPS 309

Arabidopsis thaliana (taxid: 3702)

>sp|F4IJ08|WTR15_ARATH WAT1-related protein At2g40900 OS=Arabidopsis thaliana GN=At2g40900 PE=2 SV=1

 Score =  263 bits (673), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 132/325 (40%), Positives = 208/325 (64%), Gaps = 9/325 (2%)

Query: 8   AKPYLGVIFMQFCSSIMSIITKIALTQGMSQHVLVAYRMVVATSLIAPFAIVLERKTRPK 67
           AKPY  ++ +QF  + M+++TK  L +GMS +VLVAYR   AT+ IAPFA++ ERK R K
Sbjct: 9   AKPYFAMVCLQFGYAGMNLVTKTVLDRGMSHYVLVAYRNAFATAAIAPFALLSERKVRSK 68

Query: 68  MTFRIFAKIALLGLFEPVIGQNLYFTGLKCSTATFTVAMCNILPALTFLMAWIFRLEKVK 127
           MTF IF +I LL L  PVI QNLY+ GLK ++ TF+ A+ NI+PA+T ++A +FR+EKV+
Sbjct: 69  MTFPIFMRIFLLALLGPVIDQNLYYIGLKLTSPTFSSAVSNIVPAITIILATLFRMEKVE 128

Query: 128 IKSMRSQAKILGTIVTAGGAMCMTLLKGPILEFPWKQVRILHNQSETGTHNKEEHITKGA 187
           ++ +R   K++GT+VT  G++ M   KGP + F         +     +        K A
Sbjct: 129 MRKVRCLVKVMGTLVTVVGSILMIFYKGPFINF-------FRSHLTAASSPPTADYLKAA 181

Query: 188 LMIAAGCFSWSCFIILEAFLLKSYPAELSLTALMCFVSSVEGTILALAIERGNTGIWLLH 247
           + +     SW+ F +L+A  LK Y A LS++ ++CF+ +++   LA  +E  N     + 
Sbjct: 182 VFLLLASLSWASFFVLQAATLKKYSAHLSMSTMVCFMGTLQSLALAFVMEH-NPSALNIG 240

Query: 248 FDAKLLSVLYGGFVSCT-AYFIMGWLMKRKGPVFVSSFNPLSMVIIAILGSFFIAEELFL 306
           FD  LL+  Y G +S + AY++ G +M+RKGPVFV++FNPL +VI++I+  F + + ++L
Sbjct: 241 FDMNLLASAYAGIMSSSIAYYVQGLMMQRKGPVFVTAFNPLIVVIVSIMSFFVLGQGIYL 300

Query: 307 GRIVGAIVIVIGLYMVLWGRSKDQS 331
           G ++G +V+++G+Y VLWG+  D  
Sbjct: 301 GGVIGVVVLMVGVYAVLWGKHVDDD 325

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	333
224109582	350	predicted protein [Populus trichocarpa]	0.978	0.931	0.612	1e-111
224100927	380	predicted protein [Populus trichocarpa]	0.978	0.857	0.590	1e-108
15225480	374	nodulin MtN21-like protein [Arabidopsis	0.966	0.860	0.596	1e-107
255575124	381	Auxin-induced protein 5NG4, putative [Ri	0.978	0.855	0.580	1e-107
297827555	375	nodulin MtN21 family protein [Arabidopsi	0.966	0.858	0.593	1e-107
449448663	375	PREDICTED: auxin-induced protein 5NG4-li	0.975	0.866	0.564	1e-106
224100923	368	predicted protein [Populus trichocarpa]	0.972	0.880	0.570	1e-106
359481510	396	PREDICTED: auxin-induced protein 5NG4-li	0.978	0.823	0.566	1e-106
449502577	368	PREDICTED: auxin-induced protein 5NG4-li	0.972	0.880	0.556	1e-104
15240686	377	nodulin MtN21 /EamA-like transporter fam	0.984	0.870	0.528	1e-104

>gi|224109582|ref|XP_002315243.1| predicted protein [Populus trichocarpa] gi|222864283|gb|EEF01414.1| predicted protein [Populus trichocarpa]

 Score =  406 bits (1044), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 202/330 (61%), Positives = 248/330 (75%), Gaps = 4/330 (1%)

Query: 5   YHHAKPYLGVIFMQFCSSIMSIITKIALTQGMSQHVLVAYRMVVATSLIAPFAIVLERKT 64
           Y  AKP+L V+ MQF  + MSII+K AL +GMSQHVLV YR  VAT +IAPFA + +RK 
Sbjct: 10  YDKAKPFLAVVLMQFGYAGMSIISKHALNEGMSQHVLVVYRHAVATIVIAPFAFIFDRKV 69

Query: 65  RPKMTFRIFAKIALLGLFEPVIGQNLYFTGLKCSTATFTVAMCNILPALTFLMAWIFRLE 124
           RPKMT  IF KI L+GL EP I QNLY+TG+K +TATF  AMCNILPA  FLMAW  RLE
Sbjct: 70  RPKMTLSIFFKIMLMGLLEPTIDQNLYYTGMKYTTATFASAMCNILPAFAFLMAWALRLE 129

Query: 125 KVKIKSMRSQAKILGTIVTAGGAMCMTLLKGPILEFPWKQVRILHNQSETGTHNKEEHIT 184
           KV I+ M SQAKI+GTIVT GGAM MTL+KG  L+ PW +    H  + TG   K++ I 
Sbjct: 130 KVNIRKMHSQAKIIGTIVTVGGAMLMTLVKGTQLDLPWTKGYDQH--ASTGGLTKQDPI- 186

Query: 185 KGALMIAAGCFSWSCFIILEAFLLKSYPAELSLTALMCFVSSVEGTILALAIERGNTGIW 244
           KGALMI  GC  W+ FIIL+A  LKSYP ELSLTA +CF+ ++EGT+LA+ +ERGN   W
Sbjct: 187 KGALMITTGCACWASFIILQAITLKSYPVELSLTAWICFMGTIEGTVLAVVMERGNPSAW 246

Query: 245 LLHFDAKLLSVLYGG-FVSCTAYFIMGWLMKRKGPVFVSSFNPLSMVIIAILGSFFIAEE 303
            +  D KLL+ +Y G F S  AY++ G +MKR+GPVFV++FNPLSMVI+AILGSFF+ E 
Sbjct: 247 SIALDYKLLAAVYSGVFCSGLAYYVQGLIMKRRGPVFVTAFNPLSMVIVAILGSFFLKEI 306

Query: 304 LFLGRIVGAIVIVIGLYMVLWGRSKDQSPS 333
           L+LGR+ GA+VIV GLY+VLWG+SKD+ PS
Sbjct: 307 LYLGRVFGAVVIVTGLYLVLWGKSKDEPPS 336

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224100927|ref|XP_002312071.1| predicted protein [Populus trichocarpa] gi|222851891|gb|EEE89438.1| predicted protein [Populus trichocarpa]

 Score =  397 bits (1019), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 195/330 (59%), Positives = 246/330 (74%), Gaps = 4/330 (1%)

Query: 5   YHHAKPYLGVIFMQFCSSIMSIITKIALTQGMSQHVLVAYRMVVATSLIAPFAIVLERKT 64
           Y  AKP+L VI +QF  + M  +TK AL +GMSQHVLV YR  VAT +IAPFA+V +RK 
Sbjct: 8   YDRAKPFLAVILLQFGYAGMFTMTKHALDEGMSQHVLVVYRHAVATIVIAPFALVFDRKV 67

Query: 65  RPKMTFRIFAKIALLGLFEPVIGQNLYFTGLKCSTATFTVAMCNILPALTFLMAWIFRLE 124
           RPKMT  IF KI LLGL EP I QNLY+TG+K +TATFT AMCN+LPA  FLMAW  R+E
Sbjct: 68  RPKMTLSIFFKIMLLGLLEPTIDQNLYYTGMKYTTATFTSAMCNVLPAFAFLMAWALRIE 127

Query: 125 KVKIKSMRSQAKILGTIVTAGGAMCMTLLKGPILEFPWKQVRILHNQSETGTHNKEEHIT 184
           +V I+ M SQAKI GTIVT GGAM MTL+KG  L+ PW   R    Q+ T    K++ I 
Sbjct: 128 QVNIRKMHSQAKIFGTIVTVGGAMLMTLVKGTQLDLPW--TRGYDQQASTSALTKQDPI- 184

Query: 185 KGALMIAAGCFSWSCFIILEAFLLKSYPAELSLTALMCFVSSVEGTILALAIERGNTGIW 244
           KGALMIA GC  W+ FIIL++  LKSYP ELSLTA +CF+ ++EG+++A+ +ERGN   W
Sbjct: 185 KGALMIATGCVCWASFIILQSITLKSYPVELSLTAWICFMGTIEGSMVAVVMERGNPSAW 244

Query: 245 LLHFDAKLLSVLYGGFV-SCTAYFIMGWLMKRKGPVFVSSFNPLSMVIIAILGSFFIAEE 303
            +  + KLL+ +Y G + S   Y++ G +MKRKGPVFV++F+PLSMVI+AILGSFF+ E 
Sbjct: 245 SVGLNYKLLAAVYSGVICSGIGYYVQGLIMKRKGPVFVTAFSPLSMVIVAILGSFFLKEI 304

Query: 304 LFLGRIVGAIVIVIGLYMVLWGRSKDQSPS 333
           L +GR++GA+VIV GLY+VLWG+SKDQ PS
Sbjct: 305 LCVGRVIGAVVIVTGLYLVLWGKSKDQPPS 334

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15225480|ref|NP_181483.1| nodulin MtN21-like protein [Arabidopsis thaliana] gi|3355480|gb|AAC27842.1| nodulin-like protein [Arabidopsis thaliana] gi|30017241|gb|AAP12854.1| At2g39510 [Arabidopsis thaliana] gi|110743791|dbj|BAE99731.1| nodulin-like protein [Arabidopsis thaliana] gi|330254594|gb|AEC09688.1| nodulin MtN21-like protein [Arabidopsis thaliana]

 Score =  395 bits (1016), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 195/327 (59%), Positives = 246/327 (75%), Gaps = 5/327 (1%)

Query: 9   KPYLGVIFMQFCSSIMSIITKIALTQGMSQHVLVAYRMVVATSLIAPFAIVLERKTRPKM 68
           KP++ V+ +QF  + +SII K AL QGMS HVL +YR +VAT  IAPFA  L+RK RPKM
Sbjct: 7   KPFITVVSLQFGYAGLSIIAKFALNQGMSPHVLASYRHIVATIFIAPFAYFLDRKIRPKM 66

Query: 69  TFRIFAKIALLGLFEPVIGQNLYFTGLKCSTATFTVAMCNILPALTFLMAWIFRLEKVKI 128
           T  IF KI LLGL EP I QNLY+TG+K ++ATFT AM N+LPA  F+MAWIFRLEKV +
Sbjct: 67  TLSIFFKILLLGLLEPTIDQNLYYTGMKYTSATFTAAMTNVLPAFAFIMAWIFRLEKVNV 126

Query: 129 KSMRSQAKILGTIVTAGGAMCMTLLKGPILEFPWKQVRILH-NQSETGTHNKEEHITKGA 187
           K + SQAKILGTIVT GGAM MT++KGP++  PW     +H + S TG    ++ +TKGA
Sbjct: 127 KKIHSQAKILGTIVTVGGAMLMTVVKGPLIPLPWANPHDIHQDSSNTGV---KQDLTKGA 183

Query: 188 LMIAAGCFSWSCFIILEAFLLKSYPAELSLTALMCFVSSVEGTILALAIERGNTGIWLLH 247
            +IA GC  W+ FI L+A  LKSYP ELSLTA +CF+ S+E TI+AL IERGN   W +H
Sbjct: 184 SLIAIGCICWAGFINLQAITLKSYPVELSLTAYICFLGSIESTIVALFIERGNPSAWAIH 243

Query: 248 FDAKLLSVLYGGFV-SCTAYFIMGWLMKRKGPVFVSSFNPLSMVIIAILGSFFIAEELFL 306
            D+KLL+ +YGG + S   Y++ G +MK +GPVFV++FNPLSMVI+AILGS  +AE +FL
Sbjct: 244 LDSKLLAAVYGGVICSGIGYYVQGVIMKTRGPVFVTAFNPLSMVIVAILGSIILAEVMFL 303

Query: 307 GRIVGAIVIVIGLYMVLWGRSKDQSPS 333
           GRI+GAIVIV+GLY VLWG+SKD+  S
Sbjct: 304 GRILGAIVIVLGLYSVLWGKSKDEPSS 330

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255575124|ref|XP_002528467.1| Auxin-induced protein 5NG4, putative [Ricinus communis] gi|223532143|gb|EEF33950.1| Auxin-induced protein 5NG4, putative [Ricinus communis]

 Score =  394 bits (1012), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 192/331 (58%), Positives = 242/331 (73%), Gaps = 5/331 (1%)

Query: 5   YHHAKPYLGVIFMQFCSSIMSIITKIALTQGMSQHVLVAYRMVVATSLIAPFAIVLERKT 64
           Y  AKP+L VI +QF  + +SII+K AL QGMSQHVLV YR  VAT +I PFAI+ +RK 
Sbjct: 10  YGKAKPFLAVILLQFGYAGLSIISKFALNQGMSQHVLVVYRHAVATIVITPFAILFDRKV 69

Query: 65  RPKMTFRIFAKIALLGLFEPVIGQNLYFTGLKCSTATFTVAMCNILPALTFLMAWIFRLE 124
           RPKMT  IF KI ++GL EP I QNLY+TG+K +TATF   MCNILPA  F+MAWI RLE
Sbjct: 70  RPKMTISIFLKILMMGLLEPTIDQNLYYTGMKYTTATFAATMCNILPAFAFIMAWILRLE 129

Query: 125 KVKIKSMRSQAKILGTIVTAGGAMCMTLLKGPILEFPWKQ-VRILHNQSETGTHNKEEHI 183
           KV +K + SQAK+LGTIVT GGAM MTL+KG  L  PW +    +   S   T    +  
Sbjct: 130 KVNLKRVHSQAKLLGTIVTVGGAMIMTLVKGAKLNLPWTEGYNDIQGSSSAPTM---QDT 186

Query: 184 TKGALMIAAGCFSWSCFIILEAFLLKSYPAELSLTALMCFVSSVEGTILALAIERGNTGI 243
            KGA +I  GC  WS FIIL+A  LK+YPAELSLTA +C + ++EGTI A+ +ERGN   
Sbjct: 187 IKGASLIGVGCICWSAFIILQAITLKTYPAELSLTAFICLMGTIEGTIFAVIMERGNPSA 246

Query: 244 WLLHFDAKLLSVLYGGFV-SCTAYFIMGWLMKRKGPVFVSSFNPLSMVIIAILGSFFIAE 302
           W +HFD KLL+ +Y G + S  AY++ G +MK KGPVFV++FNPL M+I+ ILGSF ++E
Sbjct: 247 WSIHFDTKLLACVYSGVICSGVAYYVQGVIMKSKGPVFVTAFNPLCMIIVTILGSFVLSE 306

Query: 303 ELFLGRIVGAIVIVIGLYMVLWGRSKDQSPS 333
            ++ GR++GA+VIVIGLY+VLWG+SKDQSPS
Sbjct: 307 IVYFGRVLGALVIVIGLYLVLWGKSKDQSPS 337

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297827555|ref|XP_002881660.1| nodulin MtN21 family protein [Arabidopsis lyrata subsp. lyrata] gi|297327499|gb|EFH57919.1| nodulin MtN21 family protein [Arabidopsis lyrata subsp. lyrata]

 Score =  394 bits (1011), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 194/327 (59%), Positives = 245/327 (74%), Gaps = 5/327 (1%)

Query: 9   KPYLGVIFMQFCSSIMSIITKIALTQGMSQHVLVAYRMVVATSLIAPFAIVLERKTRPKM 68
           KP++ V+ +QF  + +SII K AL QGMS HVL AYR +VAT  IAPFA  L+RK RPKM
Sbjct: 7   KPFITVVSLQFGYAGLSIIAKFALNQGMSPHVLAAYRHIVATIFIAPFAYFLDRKIRPKM 66

Query: 69  TFRIFAKIALLGLFEPVIGQNLYFTGLKCSTATFTVAMCNILPALTFLMAWIFRLEKVKI 128
           T  IF KI LLGL EP I QNLY+TG+K ++ATFT AM N+LPA  F+MAWIFRLEKV +
Sbjct: 67  TLPIFFKILLLGLLEPTIDQNLYYTGMKYTSATFTAAMTNVLPAFAFIMAWIFRLEKVNV 126

Query: 129 KSMRSQAKILGTIVTAGGAMCMTLLKGPILEFPWKQVRILH-NQSETGTHNKEEHITKGA 187
           K + SQAKILGT+VT GGAM MT++KGP++  PW     +H + S TG    ++ +TKGA
Sbjct: 127 KKIHSQAKILGTVVTVGGAMLMTVVKGPLIPLPWANPHDIHQDPSNTGV---QQDLTKGA 183

Query: 188 LMIAAGCFSWSCFIILEAFLLKSYPAELSLTALMCFVSSVEGTILALAIERGNTGIWLLH 247
            +IA GC  W+ FI L+A  LKSYP ELSLTA +CF+ S+E TI+AL IERGN   W + 
Sbjct: 184 SLIAIGCICWAGFINLQAITLKSYPVELSLTAYICFMGSIESTIVALFIERGNPSAWAIQ 243

Query: 248 FDAKLLSVLYGGFV-SCTAYFIMGWLMKRKGPVFVSSFNPLSMVIIAILGSFFIAEELFL 306
            D+KLL+ +YGG + S   Y++ G +MK +GPVFV++FNPLSMVI+AILGS  +AE +FL
Sbjct: 244 LDSKLLAAVYGGVICSGIGYYVQGVIMKTRGPVFVTAFNPLSMVIVAILGSIILAEVMFL 303

Query: 307 GRIVGAIVIVIGLYMVLWGRSKDQSPS 333
           GRI+GAIVIV+GLY VLWG+SKD+  S
Sbjct: 304 GRILGAIVIVLGLYSVLWGKSKDEPSS 330

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449448663|ref|XP_004142085.1| PREDICTED: auxin-induced protein 5NG4-like [Cucumis sativus]

 Score =  391 bits (1004), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 185/328 (56%), Positives = 250/328 (76%), Gaps = 3/328 (0%)

Query: 7   HAKPYLGVIFMQFCSSIMSIITKIALTQGMSQHVLVAYRMVVATSLIAPFAIVLERKTRP 66
            AKP+  V+F+QF  + M I++K AL QGMS +VLV YR  VAT +IAPFA++ ++K RP
Sbjct: 11  SAKPFFAVVFLQFGLAGMDILSKAALNQGMSNYVLVVYRHAVATIVIAPFALIFDKKVRP 70

Query: 67  KMTFRIFAKIALLGLFEPVIGQNLYFTGLKCSTATFTVAMCNILPALTFLMAWIFRLEKV 126
           KMT  +FAK+ +L L EPVI QNLYF G+K +TATF  AMCNILPA+TF+MAWI RLEKV
Sbjct: 71  KMTIPVFAKLMVLSLLEPVIDQNLYFMGMKYTTATFAAAMCNILPAITFVMAWILRLEKV 130

Query: 127 KIKSMRSQAKILGTIVTAGGAMCMTLLKGPILEFPWKQVRILHNQSETGTHNKEEHITKG 186
           +IKS+RSQAKI+GT+ T GGAM MTL+KGPI+E  W + R   N  +       +H  KG
Sbjct: 131 RIKSIRSQAKIVGTVATVGGAMIMTLMKGPIVELFWVKER--ANNPQQRGEISLQHTIKG 188

Query: 187 ALMIAAGCFSWSCFIILEAFLLKSYPAELSLTALMCFVSSVEGTILALAIERGNTGIWLL 246
           ++MI  GCFSW+CF+IL+A  LK+YPAELSLTA +C + + EGT++AL +ERGN  +W +
Sbjct: 189 SIMITIGCFSWACFMILQAITLKAYPAELSLTAWICLLGTAEGTVVALVMERGNPAVWSI 248

Query: 247 HFDAKLLSVLYGG-FVSCTAYFIMGWLMKRKGPVFVSSFNPLSMVIIAILGSFFIAEELF 305
            +  KLL+ +Y G F S  AY+I G +MK KGPVFV++F+PLSMVI+AI+ SF + E L+
Sbjct: 249 TWGTKLLAAVYSGIFCSGLAYYIQGLVMKDKGPVFVTAFSPLSMVIVAIMSSFILGERLY 308

Query: 306 LGRIVGAIVIVIGLYMVLWGRSKDQSPS 333
            GR++GA+VI++GLY+V+WG++KD++ S
Sbjct: 309 FGRVLGAVVIIVGLYLVVWGKNKDENCS 336

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224100923|ref|XP_002312070.1| predicted protein [Populus trichocarpa] gi|222851890|gb|EEE89437.1| predicted protein [Populus trichocarpa]

 Score =  391 bits (1004), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 186/326 (57%), Positives = 249/326 (76%), Gaps = 2/326 (0%)

Query: 5   YHHAKPYLGVIFMQFCSSIMSIITKIALTQGMSQHVLVAYRMVVATSLIAPFAIVLERKT 64
           Y+ A+ YL VIF+QF  S+MSI+ K+AL  GM  HVLVAYRM VA+ L  PFA+VLER +
Sbjct: 8   YNQARAYLLVIFVQFGYSVMSILAKLALNLGMKPHVLVAYRMAVASILFTPFALVLERNS 67

Query: 65  RPKMTFRIFAKIALLGLFEPVIGQNLYFTGLKCSTATFTVAMCNILPALTFLMAWIFRLE 124
           RPKMT+ +FAKIALL  FEPV+ QNL++ G+K +T TF +AMCNILPA+TF+MA IF+LE
Sbjct: 68  RPKMTWWMFAKIALLSFFEPVLDQNLFYAGMKITTPTFVLAMCNILPAMTFVMACIFKLE 127

Query: 125 KVKIKSMRSQAKILGTIVTAGGAMCMTLLKGPILEFPWKQVRILHNQSETGTHNKEEHIT 184
           KV ++ +  QAK++GT+VT GGAM + L  GP++  PW +      QS    H ++  + 
Sbjct: 128 KVDMRRLHFQAKVVGTLVTIGGAMLLPLAHGPLINLPWTKRNFCRGQSAHSVHIQD--LI 185

Query: 185 KGALMIAAGCFSWSCFIILEAFLLKSYPAELSLTALMCFVSSVEGTILALAIERGNTGIW 244
           KGA+M+  GC SWS FIIL+A +L+SYPA+LSL ALMC + +VE TILA A+ER NT +W
Sbjct: 186 KGAVMVIFGCLSWSSFIILQAMILESYPAKLSLAALMCIMGTVESTILAFAVERANTAVW 245

Query: 245 LLHFDAKLLSVLYGGFVSCTAYFIMGWLMKRKGPVFVSSFNPLSMVIIAILGSFFIAEEL 304
            ++FD +LL+ +YGG +S  AY+I G L+K +GPVF+S+ NPLS+V++AILGSF   E+ 
Sbjct: 246 SVYFDIRLLAAVYGGILSGLAYYIFGLLVKERGPVFMSASNPLSLVMVAILGSFIFKEKF 305

Query: 305 FLGRIVGAIVIVIGLYMVLWGRSKDQ 330
           +LGR +GAIVIV+GLY+VLWG+SKDQ
Sbjct: 306 YLGRAIGAIVIVLGLYLVLWGKSKDQ 331

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359481510|ref|XP_002274909.2| PREDICTED: auxin-induced protein 5NG4-like [Vitis vinifera]

 Score =  390 bits (1001), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 188/332 (56%), Positives = 249/332 (75%), Gaps = 6/332 (1%)

Query: 6   HHAKPYLGVIFMQFCSSIMSIITKIALTQGMSQHVLVAYRMVVATSLIAPFAIVLERKTR 65
           +  KP+L V F+QF  + M + +K+AL QG+S +VLV YR  +AT+ IAPFA++L++K R
Sbjct: 15  YRVKPFLAVTFLQFGFAGMDVFSKVALNQGVSNYVLVVYRHAIATAFIAPFAVILDKKVR 74

Query: 66  PKMTFRIFAKIALLGLFEPVIGQNLYFTGLKCSTATFTVAMCNILPALTFLMAWIFRLEK 125
           PKMTF IF K+ LL L EPVI QNLY+ GLK +TATF  AM NILPA+TFLMA IF LEK
Sbjct: 75  PKMTFSIFTKLMLLSLLEPVIDQNLYYFGLKYTTATFAAAMYNILPAITFLMACIFGLEK 134

Query: 126 VKIKSMRSQAKILGTIVTAGGAMCMTLLKGPILEFPWKQVRILHNQSETGTHNKEEHITK 185
           V +KS+ SQAK++GT+ T  GAM MTL+KGP++E  W + R  +NQ   G         K
Sbjct: 135 VTLKSIHSQAKVVGTVATVAGAMLMTLVKGPVIELIWTKGR--NNQGVKGGGTNIHDSIK 192

Query: 186 GALMIAAGCFSWSCFIILEAFLLKSYPAELSLTALMCFVSSVEGTILALAIERGNTGIWL 245
           G+LMI AGCFSW+CFIIL+A  LK+YPAELSLTA +C + + +GTI+AL +ERG T +W 
Sbjct: 193 GSLMITAGCFSWACFIILQAITLKTYPAELSLTAWICLLGTAQGTIVALVMERGKTSVWS 252

Query: 246 LHFDAKLLSVLYGGFV-SCTAYFIMGWLMKRKGPVFVSSFNPLSMVIIAILGSFFIAEEL 304
           +H+D K L+ LY G V S  AY+I G +MK +GPVFV++FNPLSM+I+A++ SF +AE++
Sbjct: 253 IHWDTKFLAALYSGIVCSGLAYYIQGVVMKDRGPVFVTAFNPLSMIIVAVMSSFILAEQM 312

Query: 305 FLGRIVGAIVIVIGLYMVLWGRSKDQ---SPS 333
           +LGR++GAIVIV GLY V+WG+SK+    SPS
Sbjct: 313 YLGRVIGAIVIVAGLYFVVWGKSKEYKSGSPS 344

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449502577|ref|XP_004161682.1| PREDICTED: auxin-induced protein 5NG4-like [Cucumis sativus]

 Score =  385 bits (990), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 182/327 (55%), Positives = 249/327 (76%), Gaps = 3/327 (0%)

Query: 8   AKPYLGVIFMQFCSSIMSIITKIALTQGMSQHVLVAYRMVVATSLIAPFAIVLERKTRPK 67
           ++ +  V+F+QF  + M I++K AL QGMS +VLV YR  VAT +IAPFA++ ++K RPK
Sbjct: 5   SQAFFAVVFLQFGLAGMDILSKAALNQGMSNYVLVVYRHAVATIVIAPFALIFDKKVRPK 64

Query: 68  MTFRIFAKIALLGLFEPVIGQNLYFTGLKCSTATFTVAMCNILPALTFLMAWIFRLEKVK 127
           MT  +FAK+ +L L EPVI QNLYF G+K +TATF  AMCNILPA+TF+MAWI RLEKV+
Sbjct: 65  MTIPVFAKLMVLSLLEPVIDQNLYFMGMKYTTATFAAAMCNILPAITFVMAWILRLEKVR 124

Query: 128 IKSMRSQAKILGTIVTAGGAMCMTLLKGPILEFPWKQVRILHNQSETGTHNKEEHITKGA 187
           IKS+RSQAKI+GT+ T GGAM MTL+KGPI+E  W + R   N  +       +H  KG+
Sbjct: 125 IKSIRSQAKIVGTVATVGGAMIMTLMKGPIVELFWVKER--ANNPQQRGEISLQHTIKGS 182

Query: 188 LMIAAGCFSWSCFIILEAFLLKSYPAELSLTALMCFVSSVEGTILALAIERGNTGIWLLH 247
           +MI  GCFSW+CF+IL+A  LK+YPAELSLTA +C + + EGT++AL +ERGN  +W + 
Sbjct: 183 IMITIGCFSWACFMILQAITLKAYPAELSLTAWICLLGTAEGTVVALVMERGNPAVWSIT 242

Query: 248 FDAKLLSVLYGG-FVSCTAYFIMGWLMKRKGPVFVSSFNPLSMVIIAILGSFFIAEELFL 306
           +  KLL+ +Y G F S  AY+I G +MK KGPVFV++F+PLSMVI+AI+ SF + E L+ 
Sbjct: 243 WGTKLLAAVYSGIFCSGLAYYIQGLVMKDKGPVFVTAFSPLSMVIVAIMSSFILGERLYF 302

Query: 307 GRIVGAIVIVIGLYMVLWGRSKDQSPS 333
           GR++GA+VI++GLY+V+WG++KD++ S
Sbjct: 303 GRVLGAVVIIVGLYLVVWGKNKDENCS 329

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15240686|ref|NP_196871.1| nodulin MtN21 /EamA-like transporter family protein [Arabidopsis thaliana] gi|9758033|dbj|BAB08694.1| unnamed protein product [Arabidopsis thaliana] gi|21536666|gb|AAM60998.1| nodulin-like protein [Arabidopsis thaliana] gi|332004543|gb|AED91926.1| nodulin MtN21 /EamA-like transporter family protein [Arabidopsis thaliana]

 Score =  384 bits (986), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 174/329 (52%), Positives = 252/329 (76%), Gaps = 1/329 (0%)

Query: 3   LQYHHAKPYLGVIFMQFCSSIMSIITKIALTQGMSQHVLVAYRMVVATSLIAPFAIVLER 62
           +++  A+P++ ++F+Q   ++MSI+ K+AL +GMS HVLVAYRM VA++LI PFA++LER
Sbjct: 1   MKFERARPFIAIVFIQCLYALMSIVAKLALNKGMSPHVLVAYRMAVASALITPFALILER 60

Query: 63  KTRPKMTFRIFAKIALLGLFEPVIGQNLYFTGLKCSTATFTVAMCNILPALTFLMAWIFR 122
            TRPK+TF+I  +IA+L LFEPV+ QNLY++G+K +TATFT A+CN LPA+TF+MA +F+
Sbjct: 61  NTRPKLTFKILLQIAILSLFEPVVEQNLYYSGMKLTTATFTSALCNALPAMTFIMACVFK 120

Query: 123 LEKVKIKSMRSQAKILGTIVTAGGAMCMTLLKGPILEFPW-KQVRILHNQSETGTHNKEE 181
           LEKV I+   SQAK++GT+V  GGAM MT +KG ++E PW    R L+  +      K+ 
Sbjct: 121 LEKVTIERRHSQAKLVGTMVAIGGAMLMTFVKGNVIELPWTSNSRGLNGHTHAMRIPKQA 180

Query: 182 HITKGALMIAAGCFSWSCFIILEAFLLKSYPAELSLTALMCFVSSVEGTILALAIERGNT 241
            I +G++M+ A CFSWSC+IIL+A +L  Y AELSLTALMC +  +E T++ L  ER N 
Sbjct: 181 DIARGSIMLVASCFSWSCYIILQAKILAQYKAELSLTALMCIMGMLEATVMGLIWERKNM 240

Query: 242 GIWLLHFDAKLLSVLYGGFVSCTAYFIMGWLMKRKGPVFVSSFNPLSMVIIAILGSFFIA 301
            +W ++ D  LL+ +YGG VS  AY+++GW  K +GPVFVS+FNPLSMV++AIL +F   
Sbjct: 241 SVWKINPDVTLLASIYGGLVSGLAYYVIGWASKERGPVFVSAFNPLSMVLVAILSTFVFL 300

Query: 302 EELFLGRIVGAIVIVIGLYMVLWGRSKDQ 330
           E++++GR++G++VIVIG+Y+VLWG+SKD+
Sbjct: 301 EKVYVGRVIGSVVIVIGIYLVLWGKSKDK 329

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	333
TAIR|locus:2039792	374	UMAMIT14 "AT2G39510" [Arabidop	0.966	0.860	0.570	6.8e-95
TAIR|locus:2173189	377	UMAMIT15 "Usually multiple aci	0.984	0.870	0.504	6.3e-92
TAIR|locus:2049847	380	UMAMIT12 "Usually multiple aci	0.954	0.836	0.476	1.3e-82
TAIR|locus:2132447	384	UMAMIT20 "Usually multiple aci	0.975	0.846	0.422	1.7e-73
TAIR|locus:2201148	389	UMAMIT19 "Usually multiple aci	0.963	0.825	0.451	1.4e-71
TAIR|locus:2169414	402	UMAMIT9 "Usually multiple acid	0.963	0.798	0.422	6.1e-71
TAIR|locus:2049837	336	UMAMIT13 "Usually multiple aci	0.735	0.729	0.458	1.1e-68
TAIR|locus:2132457	373	UMAMIT17 "Usually multiple aci	0.963	0.860	0.422	2.2e-66
TAIR|locus:2194864	370	SIAR1 "Siliques Are Red 1" [Ar	0.951	0.856	0.421	5.8e-66
TAIR|locus:2058460	394	UMAMIT11 "Usually multiple aci	0.942	0.796	0.399	6.2e-62

TAIR|locus:2039792 UMAMIT14 "AT2G39510" [Arabidopsis thaliana (taxid:3702)]

 Score = 944 (337.4 bits), Expect = 6.8e-95, P = 6.8e-95
 Identities = 186/326 (57%), Positives = 235/326 (72%)

Query:     9 KPYLGVIFMQFCSSIMSIITKIALTQGMSQHVLVAYRMVVATSLIAPFAIVLERKTRPKM 68
             KP++ V+ +QF  + +SII K AL QGMS HVL +YR +VAT  IAPFA  L+RK RPKM
Sbjct:     7 KPFITVVSLQFGYAGLSIIAKFALNQGMSPHVLASYRHIVATIFIAPFAYFLDRKIRPKM 66

Query:    69 TFRIFAKIALLGLFEPVIGQNLYFTGLKCSTATFTVAMCNILPALTFLMAWIFRLEKVKI 128
             T  IF KI LLGL EP I QNLY+TG+K ++ATFT AM N+LPA  F+MAWIFRLEKV +
Sbjct:    67 TLSIFFKILLLGLLEPTIDQNLYYTGMKYTSATFTAAMTNVLPAFAFIMAWIFRLEKVNV 126

Query:   129 KSMRSQAKILGTIVTAGGAMCMTLLKGPILEFPWKQVRILHNQSETGTHNKEEHITKGAL 188
             K + SQAKILGTIVT GGAM MT++KGP++  PW     +H Q  + T  K++ +TKGA 
Sbjct:   127 KKIHSQAKILGTIVTVGGAMLMTVVKGPLIPLPWANPHDIH-QDSSNTGVKQD-LTKGAS 184

Query:   189 MIAAGCFSWSCFIILEAFLLKSYPAELSLTALMCFVSSVEGTILALAIERGNTGIWLLHF 248
             +IA GC  W+ FI L+A  LKSYP ELSLTA +CF+ S+E TI+AL IERGN   W +H 
Sbjct:   185 LIAIGCICWAGFINLQAITLKSYPVELSLTAYICFLGSIESTIVALFIERGNPSAWAIHL 244

Query:   249 DAKLLSVLYGGFV-SCTAYFIMGWLMKRKGPVFVSSFNPLSMVIIAILGSFFIAEELFLX 307
             D+KLL+ +YGG + S   Y++ G +MK +GPVFV++FNPLSMVI+AILGS  +AE +FL 
Sbjct:   245 DSKLLAAVYGGVICSGIGYYVQGVIMKTRGPVFVTAFNPLSMVIVAILGSIILAEVMFLG 304

Query:   308 XXXXXXXXXXXLYMVLWGRSKDQSPS 333
                        LY VLWG+SKD+ PS
Sbjct:   305 RILGAIVIVLGLYSVLWGKSKDE-PS 329

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0016020 "membrane" evidence=IEA;ISS

TAIR|locus:2173189 UMAMIT15 "Usually multiple acids move in and out Transporters 15" [Arabidopsis thaliana (taxid:3702)]

 Score = 916 (327.5 bits), Expect = 6.3e-92, P = 6.3e-92
 Identities = 166/329 (50%), Positives = 240/329 (72%)

Query:     3 LQYHHAKPYLGVIFMQFCSSIMSIITKIALTQGMSQHVLVAYRMVVATSLIAPFAIVLER 62
             +++  A+P++ ++F+Q   ++MSI+ K+AL +GMS HVLVAYRM VA++LI PFA++LER
Sbjct:     1 MKFERARPFIAIVFIQCLYALMSIVAKLALNKGMSPHVLVAYRMAVASALITPFALILER 60

Query:    63 KTRPKMTFRIFAKIALLGLFEPVIGQNLYFTGLKCSTATFTVAMCNILPALTFLMAWIFR 122
              TRPK+TF+I  +IA+L LFEPV+ QNLY++G+K +TATFT A+CN LPA+TF+MA +F+
Sbjct:    61 NTRPKLTFKILLQIAILSLFEPVVEQNLYYSGMKLTTATFTSALCNALPAMTFIMACVFK 120

Query:   123 LEKVKIKSMRSQAKILGTIVTAGGAMCMTLLKGPILEFPW-KQVRILHNQSETGTHNKEE 181
             LEKV I+   SQAK++GT+V  GGAM MT +KG ++E PW    R L+  +      K+ 
Sbjct:   121 LEKVTIERRHSQAKLVGTMVAIGGAMLMTFVKGNVIELPWTSNSRGLNGHTHAMRIPKQA 180

Query:   182 HITKGALMIAAGCFSWSCFIILEAFLLKSYPAELSLTALMCFVSSVEGTILALAIERGNT 241
              I +G++M+ A CFSWSC+IIL+A +L  Y AELSLTALMC +  +E T++ L  ER N 
Sbjct:   181 DIARGSIMLVASCFSWSCYIILQAKILAQYKAELSLTALMCIMGMLEATVMGLIWERKNM 240

Query:   242 GIWLLHFDAKLLSVLYGGFVSCTAYFIMGWLMKRKGPVFVSSFNPLSMVIIAILGSFFIA 301
              +W ++ D  LL+ +YGG VS  AY+++GW  K +GPVFVS+FNPLSMV++AIL +F   
Sbjct:   241 SVWKINPDVTLLASIYGGLVSGLAYYVIGWASKERGPVFVSAFNPLSMVLVAILSTFVFL 300

Query:   302 EELFLXXXXXXXXXXXXLYMVLWGRSKDQ 330
             E++++            +Y+VLWG+SKD+
Sbjct:   301 EKVYVGRVIGSVVIVIGIYLVLWGKSKDK 329

GO:0016020 "membrane" evidence=IEA

TAIR|locus:2049847 UMAMIT12 "Usually multiple acids move in and out Transporters 12" [Arabidopsis thaliana (taxid:3702)]

 Score = 828 (296.5 bits), Expect = 1.3e-82, P = 1.3e-82
 Identities = 154/323 (47%), Positives = 227/323 (70%)

Query:     8 AKPYLGVIFMQFCSSIMSIITKIALTQGMSQHVLVAYRMVVATSLIAPFAIVLERKTRPK 67
             A+P++ ++ +Q   + M I++K  L +GMS +VLV YR  VAT ++APFA   ++K RPK
Sbjct:    13 ARPFISMVVLQVGLAGMDILSKAVLNKGMSNYVLVVYRHAVATIVMAPFAFYFDKKVRPK 72

Query:    68 MTFRIFAKIALLGLFEPVIGQNLYFTGLKCSTATFTVAMCNILPALTFLMAWIFRLEKVK 127
             MT  IF KI+LLGL EPVI QNLY+ G+K +TATF  AM N+LPA+TF++A+IF LE+VK
Sbjct:    73 MTLMIFFKISLLGLLEPVIDQNLYYLGMKYTTATFATAMYNVLPAITFVLAYIFGLERVK 132

Query:   128 IKSMRSQAKILGTIVTAGGAMCMTLLKGPILEFPWKQVRILHNQSETGTHNKEEHITKGA 187
             ++ +RS  K++GT+ T GGAM MTL+KGP+L+  W +    HN + T  H+      KGA
Sbjct:   133 LRCIRSTGKVVGTLATVGGAMIMTLVKGPVLDLFWTKGVSAHNTAGTDIHSA----IKGA 188

Query:   188 LMIAAGCFSWSCFIILEAFLLKSYPAELSLTALMCFVSSVEGTILALAIERGNTGIWLLH 247
             +++  GCFS++CF+IL+A  L++YPAELSLTA +C + ++EGT +AL +E+GN   W + 
Sbjct:   189 VLVTIGCFSYACFMILQAITLRTYPAELSLTAWICLMGTIEGTAVALVMEKGNPSAWAIG 248

Query:   248 FDAKLLSVLYGGFV-SCTAYFIMGWLMKRKGPVFVSSFNPLSMVIIAILGSFFIAEELFL 306
             +D KLL+  Y G V S  AY++ G +MK +GPVFV++F+PL M+I+AI+ +   AE+++L
Sbjct:   249 WDTKLLTATYSGIVCSALAYYVGGVVMKTRGPVFVTAFSPLCMIIVAIMSTIIFAEQMYL 308

Query:   307 XXXXXXXXXXXXLYMVLWGRSKD 329
                         LY+V+WG+ KD
Sbjct:   309 GRVLGAVVICAGLYLVIWGKGKD 331

GO:0005737 "cytoplasm" evidence=ISM

GO:0016020 "membrane" evidence=IEA;ISS

GO:0019761 "glucosinolate biosynthetic process" evidence=RCA

TAIR|locus:2132447 UMAMIT20 "Usually multiple acids move in and out Transporters 20" [Arabidopsis thaliana (taxid:3702)]

 Score = 742 (266.3 bits), Expect = 1.7e-73, P = 1.7e-73
 Identities = 140/331 (42%), Positives = 216/331 (65%)

Query:     6 HHAKPYLGVIFMQFCSSIMSIITKIALTQGMSQHVLVAYRMVVATSLIAPFAIVLERKTR 65
             H  +PYL +IF+QF ++   I+    L QG +++V++ YR +VA  ++APFA++ ERK R
Sbjct:     9 HKLRPYLLMIFLQFGAAGTYIVIMATLNQGQNRYVVIVYRNLVAALVLAPFALIFERKVR 68

Query:    66 PKMTFRIFAKIALLGLFEPVIGQNLYFTGLKCSTATFTVAMCNILPALTFLMAWIFRLEK 125
             PKMT  +  KI  LG  EPV+ Q   + G+  ++AT+T A+ NILP++TF++AWI R+EK
Sbjct:    69 PKMTLSVLWKIMALGFLEPVLDQGFGYLGMNMTSATYTSAIMNILPSVTFIIAWILRMEK 128

Query:   126 VKIKSMRSQAKILGTIVTAGGAMCMTLLKGPILEFPWKQVRILHNQSETGTHNKEEHIT- 184
             V I  +RS+AKI+GT+V  GGA+ MTL KGP++  PW    +  +Q    T+N ++H   
Sbjct:   129 VNIAEVRSKAKIIGTLVGLGGALVMTLYKGPLIPLPWSNPNM--DQQNGHTNNSQDHNNW 186

Query:   185 -KGALMIAAGCFSWSCFIILEAFLLKSYPAELSLTALMCFVSSVEGTILALAIERGNTGI 243
               G L+I  GC +WS F +L++  +K+YPA+LSL+AL+C   +V+   +AL +ER  +G 
Sbjct:   187 VVGTLLILLGCVAWSGFYVLQSITIKTYPADLSLSALICLAGAVQSFAVALVVERHPSG- 245

Query:   244 WLLHFDAKLLSVLYGGFVSC-TAYFIMGWLMKRKGPVFVSSFNPLSMVIIAILGSFFIAE 302
             W + +DA+L + LY G VS    Y++ G +MK +GPVFV++FNPL M+++A++ SF + E
Sbjct:   246 WAVGWDARLFAPLYTGIVSSGITYYVQGMVMKTRGPVFVTAFNPLCMILVALIASFILHE 305

Query:   303 ELFLXXXXXXXXXXXXLYMVLWGRSKDQSPS 333
             ++              LYMV+WG+ KD   S
Sbjct:   306 QIHFGCVIGGAVIAAGLYMVVWGKGKDYEVS 336

GO:0005576 "extracellular region" evidence=ISM

GO:0016020 "membrane" evidence=IEA

TAIR|locus:2201148 UMAMIT19 "Usually multiple acids move in and out Transporters 19" [Arabidopsis thaliana (taxid:3702)]

 Score = 724 (259.9 bits), Expect = 1.4e-71, P = 1.4e-71
 Identities = 149/330 (45%), Positives = 211/330 (63%)

Query:     9 KPYLGVIFMQFCSSIMSIITKIALTQGMSQHVLVAYRMVVATSLIAPFAIVLERKTRPKM 68
             KPYL +I MQF  + M IIT ++L  GM+ +VL  YR  +AT++IAPFA+  ERK RPKM
Sbjct:    10 KPYLAMISMQFGYAGMYIITMVSLKHGMNHYVLAVYRHAIATAVIAPFALFHERKIRPKM 69

Query:    69 TFRIFAKIALLGLFEPVIGQNLYFTGLKCSTATFTVAMCNILPALTFLMAWIFRLEKVKI 128
             TFRIF +IALLG  EPV+ QNLY+ G+  ++ATF  A  N+LPA+TF++A IFRLE V  
Sbjct:    70 TFRIFLQIALLGFIEPVLDQNLYYVGMTYTSATFASATANVLPAITFVLAIIFRLESVNF 129

Query:   129 KSMRSQAKILGTIVTAGGAMCMTLLKGPILEF-PWKQVRILHNQSETGTHN------KEE 181
             K +RS AK++GT++T  GA+ MTL KGPI++F  +       +    G+H        ++
Sbjct:   130 KKVRSIAKVVGTVITVSGALLMTLYKGPIVDFIRFGGGGGGGSDGAGGSHGGAGAAAMDK 189

Query:   182 HITKGALMIAAGCFSWSCFIILEAFLLKSYPAELSLTALMCFVSSVEGTILALAIERGNT 241
             H   G LM+    F W+ F IL++F LK YPAELSLT L+C + ++EGT ++L   R + 
Sbjct:   190 HWIPGTLMLLGRTFGWAGFFILQSFTLKQYPAELSLTTLICLMGTLEGTAVSLVTVR-DL 248

Query:   242 GIWLLHFDAKLLSVLYGGFV-SCTAYFIMGWLMKRKGPVFVSSFNPLSMVIIAILGSFFI 300
               W + FD+ L +  Y G + S  AY++ G +M+ +GPVFV++FNPL +VI A LG   +
Sbjct:   249 SAWKIGFDSNLFAAAYSGVICSGVAYYVQGVVMRERGPVFVATFNPLCVVITAALGVVVL 308

Query:   301 AEELFLXXXXXXXXXXXXLYMVLWGRSKDQ 330
             +E + L            LY V+WG+ KD+
Sbjct:   309 SESIHLGSVIGTLFIIVGLYTVVWGKGKDK 338

GO:0016020 "membrane" evidence=IEA;ISS

TAIR|locus:2169414 UMAMIT9 "Usually multiple acids move in and out Transporters 9" [Arabidopsis thaliana (taxid:3702)]

 Score = 718 (257.8 bits), Expect = 6.1e-71, P = 6.1e-71
 Identities = 139/329 (42%), Positives = 214/329 (65%)

Query:     8 AKPYLGVIFMQFCSSIMSIITKIALTQGMSQHVLVAYRMVVATSLIAPFAIVLERKTRPK 67
             +KPY  +I +QF  + M+IITKI+L  GMS +VLV YR  +AT++IAPFA   ERK +PK
Sbjct:    16 SKPYFAMISLQFGYAGMNIITKISLNTGMSHYVLVVYRHAIATAVIAPFAFFFERKAQPK 75

Query:    68 MTFRIFAKIALLGLFEPVIGQNLYFTGLKCSTATFTVAMCNILPALTFLMAWIFRLEKVK 127
             +TF IF ++ +LGL  PVI QN Y+ GLK ++ TF+ AM N+LPA+TF++A +FR+E + 
Sbjct:    76 ITFSIFMQLFILGLLGPVIDQNFYYMGLKYTSPTFSCAMSNMLPAMTFILAVLFRMEMLD 135

Query:   128 IKSMRSQAKILGTIVTAGGAMCMTLLKGPILEFPWKQVRILHNQSETGT-----HNKEEH 182
             +K +  QAKI GT+VT  GAM MT+ KGPI+E  W +   + + S   T      + ++ 
Sbjct:   136 LKKLWCQAKIAGTVVTVAGAMLMTIYKGPIVELFWTKYMHIQDSSHANTTSSKNSSSDKE 195

Query:   183 ITKGALMIAAGCFSWSCFIILEAFLLKSYPA-ELSLTALMCFVSSVEGTILALAIERGNT 241
               KG++++     +W+   +L+A +LK+Y   +LSLT L+CF+ +++   +   +E  N 
Sbjct:   196 FLKGSILLIFATLAWASLFVLQAKILKTYAKHQLSLTTLICFIGTLQAVAVTFVMEH-NP 254

Query:   242 GIWLLHFDAKLLSVLYGGFV-SCTAYFIMGWLMKRKGPVFVSSFNPLSMVIIAILGSFFI 300
               W + +D  LL+  Y G V S  +Y++ G +MK++GPVF ++F+PL MVI+A++GSF +
Sbjct:   255 SAWRIGWDMNLLAAAYSGIVASSISYYVQGIVMKKRGPVFATAFSPLMMVIVAVMGSFVL 314

Query:   301 AEELFLXXXXXXXXXXXXLYMVLWGRSKD 329
             AE++FL            LY VLWG+ K+
Sbjct:   315 AEKIFLGGVIGAVLIVIGLYAVLWGKQKE 343

GO:0009507 "chloroplast" evidence=ISM

GO:0016020 "membrane" evidence=IEA;ISS

TAIR|locus:2049837 UMAMIT13 "Usually multiple acids move in and out Transporters 13" [Arabidopsis thaliana (taxid:3702)]

 Score = 615 (221.5 bits), Expect = 1.1e-68, Sum P(2) = 1.1e-68
 Identities = 116/253 (45%), Positives = 172/253 (67%)

Query:    84 PVIGQNLYFTGLKCSTATFTVAMCNILPALTFLMAWIFRLEKVKIKSMRSQAKILGTIVT 143
             PVI QNL+  G+K +TATF +A+ N LPA+TF++A IFRLE VK +S+RS AK++GT+ T
Sbjct:    62 PVIAQNLFNLGMKYTTATFAIALYNTLPAVTFILALIFRLESVKFQSIRSAAKVVGTVTT 121

Query:   144 AGGAMCMTLLKGPILEFPWKQVRILHNQSETGTHNKEEHITKGALMIAAGCFSWSCFIIL 203
              GG M MTL+KGP L+  W +     N   T  H+      KGA+++  GCFS++CF+IL
Sbjct:   122 VGGIMVMTLVKGPALDLFWTKGPSAQNTVGTDIHSS----IKGAVLVTIGCFSYACFMIL 177

Query:   204 EAFLLKSYPAELSLTALMCFVSSVEGTILALAIERGNTGIWLLHFDAKLLSVLYGGFVSC 263
             +A  LK+YPAELSL   +C + ++EG ++AL +E+GN  +W + +D KLL++ Y G V C
Sbjct:   178 QAITLKTYPAELSLATWICLIGTIEGVVVALVMEKGNPSVWAIGWDTKLLTITYSGIV-C 236

Query:   264 TA--YFIMGWLMKRKGPVFVSSFNPLSMVIIAILGSFFIAEELFLXXXXXXXXXXXXLYM 321
             +A  Y+I G +MK +GPVFV++F PL M+++AI+ S    E+++L            LY+
Sbjct:   237 SALGYYIGGVVMKTRGPVFVTAFKPLCMIVVAIMSSIIFDEQMYLGRALGATVICVGLYL 296

Query:   322 VLWGRSKD-QSPS 333
             V+WG++KD + PS
Sbjct:   297 VIWGKAKDYEYPS 309

GO:0016020 "membrane" evidence=IEA

GO:0016556 "mRNA modification" evidence=RCA

TAIR|locus:2132457 UMAMIT17 "Usually multiple acids move in and out Transporters 17" [Arabidopsis thaliana (taxid:3702)]

 Score = 675 (242.7 bits), Expect = 2.2e-66, P = 2.2e-66
 Identities = 137/324 (42%), Positives = 202/324 (62%)

Query:     9 KPYLGVIFMQFCSSIMSIITKIALTQGMSQHVLVAYRMVVATSLIAPFAIVLERKTRPKM 68
             KP + +I +QF  + M IIT ++   GM+  +L  YR VVAT +IAPFA++LERK RPKM
Sbjct:    10 KPIIAIISLQFGYAGMYIITMVSFKHGMNHWILATYRHVVATIVIAPFALILERKIRPKM 69

Query:    69 TFRIFAKIALLGLFEPVIGQNLYFTGLKCSTATFTVAMCNILPALTFLMAWIFRLEKVKI 128
             T+ +F +I  LG  EP++ QNLY+ G+K ++AT++ A  N LPA+TF+MA IFR+E V +
Sbjct:    70 TWPLFLRILALGFLEPLLDQNLYYIGMKATSATYSSAFVNALPAITFIMAVIFRIETVNL 129

Query:   129 KSMRSQAKILGTIVTAGGAMCMTLLKGPILEFPWKQVRILHNQSE-TGTHNKEEHITKGA 187
             K  RS AK++GT +T GGAM MTL KGP +E        LH  S  T +   +++   G 
Sbjct:   130 KKTRSLAKVIGTAITVGGAMVMTLYKGPAIELFKTAHSSLHGGSSGTSSETTDQNWVTGT 189

Query:   188 LMIAAGCFSWSCFIILEAFLLKSYPAELSLTALMCFVSSVEGTILALAIERGNTGIWLLH 247
             L +     +W+ F IL++F LK YPAELSL   +C + +V  TI +L + R +   W + 
Sbjct:   190 LAVMGSITTWAGFFILQSFTLKKYPAELSLVMWICAMGTVLNTIASLIMVR-DVSAWKVG 248

Query:   248 FDAKLLSVLYGGFV-SCTAYFIMGWLMKRKGPVFVSSFNPLSMVIIAILGSFFIAEELFL 306
              D+  L+ +Y G V S  AY+I   +++ +GPVF +SF+P+ M+I A LG   +AE++ L
Sbjct:   249 MDSGTLAAVYSGVVCSGMAYYIQSIVIRERGPVFTTSFSPMCMIITAFLGVLVLAEKIHL 308

Query:   307 XXXXXXXXXXXXLYMVLWGRSKDQ 330
                         LY V+WG++KD+
Sbjct:   309 GSIIGAIFIVFGLYSVVWGKAKDE 332

GO:0016020 "membrane" evidence=IEA

TAIR|locus:2194864 SIAR1 "Siliques Are Red 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 671 (241.3 bits), Expect = 5.8e-66, P = 5.8e-66
 Identities = 137/325 (42%), Positives = 203/325 (62%)

Query:     9 KPYLGVIFMQFCSSIMSIITKIALTQGMSQHVLVAYRMVVATSLIAPFAIVLERKTRPKM 68
             KP L +I +QF  + M IIT ++   GM   VL  YR VVAT ++APFA++ ERK RPKM
Sbjct:    10 KPILAIISLQFGYAGMYIITMVSFKHGMDHWVLATYRHVVATVVMAPFALMFERKIRPKM 69

Query:    69 TFRIFAKIALLGLFEPVIGQNLYFTGLKCSTATFTVAMCNILPALTFLMAWIFRLEKVKI 128
             T  IF ++  LG+ EP++ QNLY+ GLK ++A++T A  N LPA+TF++A IFRLE V  
Sbjct:    70 TLAIFWRLLALGILEPLMDQNLYYIGLKNTSASYTSAFTNALPAVTFILALIFRLETVNF 129

Query:   129 KSMRSQAKILGTIVTAGGAMCMTLLKGPILEFPWKQVRILHNQSETGTHNKE--EHITKG 186
             + + S AK++GT++T GGAM MTL KGP +E     V+  HN    G+ +    +H   G
Sbjct:   130 RKVHSVAKVVGTVITVGGAMIMTLYKGPAIEI----VKAAHNSFHGGSSSTPTGQHWVLG 185

Query:   187 ALMIAAGCFSWSCFIILEAFLLKSYPAELSLTALMCFVSSVEGTILALAIERGNTGIWLL 246
              + I     +W+ F IL+++ LK YPAELSL  L+C + ++   I +L + R +   W +
Sbjct:   186 TIAIMGSISTWAAFFILQSYTLKVYPAELSLVTLICGIGTILNAIASLIMVR-DPSAWKI 244

Query:   247 HFDAKLLSVLYGGFV-SCTAYFIMGWLMKRKGPVFVSSFNPLSMVIIAILGSFFIAEELF 305
               D+  L+ +Y G V S  AY+I   ++K++GPVF +SF+P+ M+I A LG+  +AE++ 
Sbjct:   245 GMDSGTLAAVYSGVVCSGIAYYIQSIVIKQRGPVFTTSFSPMCMIITAFLGALVLAEKIH 304

Query:   306 LXXXXXXXXXXXXLYMVLWGRSKDQ 330
             L            LY V+WG+SKD+
Sbjct:   305 LGSIIGAVFIVLGLYSVVWGKSKDE 329

GO:0005739 "mitochondrion" evidence=ISM

GO:0016020 "membrane" evidence=IEA;ISS

GO:0005515 "protein binding" evidence=IPI

GO:0005886 "plasma membrane" evidence=IDA

GO:0006865 "amino acid transport" evidence=IDA

GO:0015171 "amino acid transmembrane transporter activity" evidence=IDA

GO:0032973 "amino acid export" evidence=IDA

GO:0034639 "L-amino acid efflux transmembrane transporter activity" evidence=IDA

GO:0043090 "amino acid import" evidence=IDA

GO:0080144 "amino acid homeostasis" evidence=IMP

TAIR|locus:2058460 UMAMIT11 "Usually multiple acids move in and out Transporters 11" [Arabidopsis thaliana (taxid:3702)]

 Score = 633 (227.9 bits), Expect = 6.2e-62, P = 6.2e-62
 Identities = 129/323 (39%), Positives = 201/323 (62%)

Query:     8 AKPYLGVIFMQFCSSIMSIITKIALTQGMSQHVLVAYRMVVATSLIAPFAIVLERKTRPK 67
             AKPY  ++ +QF  + M+++TK  L +GMS +VLVAYR   AT+ IAPFA++ ERK R K
Sbjct:     9 AKPYFAMVCLQFGYAGMNLVTKTVLDRGMSHYVLVAYRNAFATAAIAPFALLSERKVRSK 68

Query:    68 MTFRIFAKIALLGLFEPVIGQNLYFTGLKCSTATFTVAMCNILPALTFLMAWIFRLEKVK 127
             MTF IF +I LL L  PVI QNLY+ GLK ++ TF+ A+ NI+PA+T ++A +FR+EKV+
Sbjct:    69 MTFPIFMRIFLLALLGPVIDQNLYYIGLKLTSPTFSSAVSNIVPAITIILATLFRMEKVE 128

Query:   128 IKSMRSQAKILGTIVTAGGAMCMTLLKGPILEFPWKQVRILHNQSETGTHNKEEHITKGA 187
             ++ +R   K++GT+VT  G++ M   KGP + F ++      +   T  +       K A
Sbjct:   129 MRKVRCLVKVMGTLVTVVGSILMIFYKGPFINF-FRSHLTAASSPPTADY------LKAA 181

Query:   188 LMIAAGCFSWSCFIILEAFLLKSYPAELSLTALMCFVSSVEGTILALAIERGNTGIWLLH 247
             + +     SW+ F +L+A  LK Y A LS++ ++CF+ +++   LA  +E  N     + 
Sbjct:   182 VFLLLASLSWASFFVLQAATLKKYSAHLSMSTMVCFMGTLQSLALAFVMEH-NPSALNIG 240

Query:   248 FDAKLLSVLYGGFVSCT-AYFIMGWLMKRKGPVFVSSFNPLSMVIIAILGSFFIAEELFL 306
             FD  LL+  Y G +S + AY++ G +M+RKGPVFV++FNPL +VI++I+  F + + ++L
Sbjct:   241 FDMNLLASAYAGIMSSSIAYYVQGLMMQRKGPVFVTAFNPLIVVIVSIMSFFVLGQGIYL 300

Query:   307 XXXXXXXXXXXXLYMVLWGRSKD 329
                         +Y VLWG+  D
Sbjct:   301 GGVIGVVVLMVGVYAVLWGKHVD 323

GO:0005576 "extracellular region" evidence=ISM

GO:0016020 "membrane" evidence=IEA;ISS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
O80638	WTR14_ARATH	No assigned EC number	0.5963	0.9669	0.8609	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	333
PLN00411	358	PLN00411, PLN00411, nodulin MtN21 family protein;	2e-47
COG0697	292	COG0697, RhaT, Permeases of the drug/metabolite tr	2e-06
pfam00892	126	pfam00892, EamA, EamA-like transporter family	2e-06
pfam00892	126	pfam00892, EamA, EamA-like transporter family	5e-06
TIGR00950	260	TIGR00950, 2A78, Carboxylate/Amino Acid/Amine Tran	4e-04
TIGR03340	281	TIGR03340, phn_DUF6, phosphonate utilization assoc	5e-04

>gnl|CDD|177805 PLN00411, PLN00411, nodulin MtN21 family protein; Provisional

 Score =  163 bits (413), Expect = 2e-47
 Identities = 96/312 (30%), Positives = 178/312 (57%), Gaps = 10/312 (3%)

Query: 24  MSIITKIALTQGMSQHVLVAYRMVVATSLIAPFAIVLER-KTRPKMTFRIFAKIALLGLF 82
           +S + K+A ++G++ +  + Y  ++A+ L+ P      R ++ P ++  I +KI LLG  
Sbjct: 28  ISTLFKVATSKGLNIYPFLGYSYLLASLLLLPSLFFTNRSRSLPPLSVSILSKIGLLGFL 87

Query: 83  EPVIGQNLYFTGLKCSTATFTVAMCNILPALTFLMAWIFRLEKVKIKSMRSQAKILGTIV 142
             +     Y  G++ S  T   A+ NI PALTF++A IFR+EKV  K   S AK++GTI+
Sbjct: 88  GSMYVITGYI-GIEYSNPTLASAISNITPALTFILAIIFRMEKVSFKERSSVAKVMGTIL 146

Query: 143 TAGGAMCMTLLKGPILEF----PWKQVRILHNQSETGTHNKEEHITKGALMIAAGCFSWS 198
           +  GA+ +    GP +      P+   R L   S   + +  + +  GAL+   G F   
Sbjct: 147 SLIGALVVIFYHGPRVFVASSPPYLNFRQL---SPPLSSSNSDWLIGGALLTIQGIFVSV 203

Query: 199 CFIILEAFLLKSYPAELSLTALMCFVSSVEGTILALAIERGNTGIWLLHFDAKLLSVLYG 258
            FI L+A ++  YPA  +++ L     S+  +++ L +E+ N  +W++HFD  L++++  
Sbjct: 204 SFI-LQAHIMSEYPAAFTVSFLYTVCVSIVTSMIGLVVEKNNPSVWIIHFDITLITIVTM 262

Query: 259 GFVSCTAYFIMGWLMKRKGPVFVSSFNPLSMVIIAILGSFFIAEELFLGRIVGAIVIVIG 318
             ++   Y I  W ++ KGP++++ F PLS++I  ++G+ F+ + L+LG ++G I+I +G
Sbjct: 263 AIITSVYYVIHSWTVRHKGPLYLAIFKPLSILIAVVMGAIFLNDSLYLGCLIGGILITLG 322

Query: 319 LYMVLWGRSKDQ 330
            Y V+WG++ ++
Sbjct: 323 FYAVMWGKANEE 334

Length = 358

>gnl|CDD|223769 COG0697, RhaT, Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]

 Score = 48.3 bits (115), Expect = 2e-06
 Identities = 62/323 (19%), Positives = 116/323 (35%), Gaps = 35/323 (10%)

Query: 6   HHAKPYLGVIFMQFCSSIMSIITKIALTQGMSQHVLVAYRMVVATSLIAPFAIVLERKTR 65
                 L ++       +  I  K+A+          A R ++A  L+ P    L     
Sbjct: 4   ALLLGLLALLLWGLLWGLSFIALKLAVESLDPFLFAAALRFLIAALLLLPLL--LLEPRG 61

Query: 66  PKMTFRIFAKIALLGLFEPVIGQNLYFTGLKCSTATFTVAMCNILPALTFLMAWIFRLEK 125
            +   R +  + LL L    +   L F  LK ++A+    +  +LP  T L+A +  L +
Sbjct: 62  LRPALRPWLLLLLLALLGLALPFLLLFLALKYTSASVASLIIGLLPLFTALLAVLLLLGE 121

Query: 126 VKIKSMRSQAKILGTIVTAGGAMCMTLLKGPILEFPWKQVRILHNQSETGTHNKEEHITK 185
                  S  +ILG ++   G + + L  G                              
Sbjct: 122 R-----LSLLQILGILLALAGVLLILLGGGGGGILSLL---------------------- 154

Query: 186 GALMIAAGCFSWSCFIILEAFLLKSYPAELSLTALMCFVSSVEGTILALAIERGNTGIWL 245
           G L+  A    W+ +  L   L +  P  L+L   +     +   +L   +      I  
Sbjct: 155 GLLLALAAALLWALYTALVKRLSRLGPVTLALLLQLLLALLL---LLLFFLSGFGAPILS 211

Query: 246 LHFDAKLLSVLYGGFVSCTAYFIMGWLMKRKGPVFVSSFNPLSMVIIAILGSFFIAEELF 305
             +   LL +  G F +  AY +  + ++  G   V+  + L  V  A+LG   + E L 
Sbjct: 212 RAW---LLLLYLGVFSTGLAYLLWYYALRLLGASLVALLSLLEPVFAALLGVLLLGEPLS 268

Query: 306 LGRIVGAIVIVIGLYMVLWGRSK 328
             +++GA ++V+G+ +      +
Sbjct: 269 PAQLLGAALVVLGVLLASLRARR 291

Length = 292

>gnl|CDD|216178 pfam00892, EamA, EamA-like transporter family

 Score = 46.1 bits (110), Expect = 2e-06
 Identities = 31/134 (23%), Positives = 63/134 (47%), Gaps = 8/134 (5%)

Query: 19  FCSSIMSIITKIALTQGMSQHVLVAYRMVVATSLIAPFAIVLERKTRPKMTFRIFAKIAL 78
              ++  + +K  L + +S     AYR ++A  L+    + L RK    ++ +    +  
Sbjct: 1   LSWALYFVFSKKLL-ERISPLTFTAYRFLIAGILLI-LLLFLLRKPFALLSLKAILALLY 58

Query: 79  LGLFEPVIGQNLYFTGLKCSTATFTVAMCNILPALTFLMAWIFRLEKVKIKSMRSQAKIL 138
           LGLF   +G  LYF  LK  +A+    + ++ P  T +++ +   EK+ +K      ++L
Sbjct: 59  LGLFGTALGYLLYFYALKYVSASNASVITSLSPVFTLILSVLLLGEKLTLK------QLL 112

Query: 139 GTIVTAGGAMCMTL 152
           G ++   G + + L
Sbjct: 113 GIVLILLGVLLILL 126

This family includes many hypothetical membrane proteins of unknown function. Many of the proteins contain two copies of the aligned region. The family used to be known as DUF6. Length = 126

>gnl|CDD|216178 pfam00892, EamA, EamA-like transporter family

 Score = 44.9 bits (107), Expect = 5e-06
 Identities = 30/130 (23%), Positives = 57/130 (43%), Gaps = 4/130 (3%)

Query: 195 FSWSCFIILEAFLLKSYPAELSLTALMCFVSSVEGTILALAIERGNTGIWLLHFDAKLLS 254
            SW+ + +    LL+     L+ TA    ++ +   +L L +        LL   A L  
Sbjct: 1   LSWALYFVFSKKLLERISP-LTFTAYRFLIAGI---LLILLLFLLRKPFALLSLKAILAL 56

Query: 255 VLYGGFVSCTAYFIMGWLMKRKGPVFVSSFNPLSMVIIAILGSFFIAEELFLGRIVGAIV 314
           +  G F +   Y +  + +K       S    LS V   IL    + E+L L +++G ++
Sbjct: 57  LYLGLFGTALGYLLYFYALKYVSASNASVITSLSPVFTLILSVLLLGEKLTLKQLLGIVL 116

Query: 315 IVIGLYMVLW 324
           I++G+ ++L 
Sbjct: 117 ILLGVLLILL 126

This family includes many hypothetical membrane proteins of unknown function. Many of the proteins contain two copies of the aligned region. The family used to be known as DUF6. Length = 126

>gnl|CDD|233205 TIGR00950, 2A78, Carboxylate/Amino Acid/Amine Transporter

 Score = 40.8 bits (96), Expect = 4e-04
 Identities = 48/301 (15%), Positives = 96/301 (31%), Gaps = 52/301 (17%)

Query: 25  SIITKIALTQGMSQHVLVAYRMVVATSLIAPFAIVLERKTRPKMTFRIFAKIALLGLFEP 84
            ++    L   +  +  V  R++ A  L+ P         R         ++ LLG  + 
Sbjct: 5   GVVIGQYLEGQVPLYFAVFRRLIFALLLLLPLLRRRPPLKRLL-------RLLLLGALQI 57

Query: 85  VIGQNLYFTGLKCSTATFTVAMCNILPALTFLMAWIFRLEKVKIKSMRSQAKILGTIVTA 144
            +   LYF  +K         +  + P    L++ +   E+ +         +L   V  
Sbjct: 58  GVFYVLYFVAVKRLPVGEAALLLYLAPLYVTLLSDLMGKERPRKL-------VLLAAVLG 110

Query: 145 GGAMCMTLLKGPILEFPWKQVRILHNQSETGTHNKEEHITKGALMIAAGCFSWSCFIILE 204
                + L  G +   P                        G L+      S++   +L 
Sbjct: 111 LAGAVLLLSDGNLSINPA-----------------------GLLLGLGSGISFALGTVLY 147

Query: 205 AFLLKSYPAELSLTALMCFVSSVEGTILALAIERGNTGIWLLHFDAKLLSVLYGGFV--- 261
             L+K    EL        +  +   +L           W L  + + LS+ +G  +   
Sbjct: 148 KRLVKKEGPELLQFTGWVLL--LGALLLLPFA-------WFLGPNPQALSLQWGALLYLG 198

Query: 262 ---SCTAYFIMGWLMKRKGPVFVSSFNPLSMVIIAILGSFFIAEELFLGRIVGAIVIVIG 318
              +  AYF+    +    P   S       ++  +LG   + E L L +++G  +I+  
Sbjct: 199 LIGTALAYFLWNKGLTLVDPSAASILALAEPLVALLLGLLILGETLSLPQLIGGALIIAA 258

Query: 319 L 319
           +
Sbjct: 259 V 259

[Transport and binding proteins, Amino acids, peptides and amines]. Length = 260

>gnl|CDD|234171 TIGR03340, phn_DUF6, phosphonate utilization associated putative membrane protein

 Score = 40.9 bits (96), Expect = 5e-04
 Identities = 24/91 (26%), Positives = 40/91 (43%), Gaps = 9/91 (9%)

Query: 241 TGIWLLHFDAK---------LLSVLYGGFVSCTAYFIMGWLMKRKGPVFVSSFNPLSMVI 291
             +  L    +         L S   GG +   AY ++ W M R     V +    S+V 
Sbjct: 191 FLLLYLKRHGRSMFPYARQILPSATLGGLMIGGAYALVLWAMTRLPVATVVALRNTSIVF 250

Query: 292 IAILGSFFIAEELFLGRIVGAIVIVIGLYMV 322
             +LG +F+ E  +L R++G  +IV GL ++
Sbjct: 251 AVVLGIWFLNERWYLTRLMGVCIIVAGLVVL 281

This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira. Length = 281

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	333
PLN00411	358	nodulin MtN21 family protein; Provisional	100.0
PRK11272	292	putative DMT superfamily transporter inner membran	100.0
PRK11453	299	O-acetylserine/cysteine export protein; Provisiona	100.0
PRK15430	296	putative chloramphenical resistance permease RarD;	100.0
PRK11689	295	aromatic amino acid exporter; Provisional	100.0
PRK10532	293	threonine and homoserine efflux system; Provisiona	100.0
TIGR00950	260	2A78 Carboxylate/Amino Acid/Amine Transporter.	100.0
TIGR00817	302	tpt Tpt phosphate/phosphoenolpyruvate translocator	100.0
TIGR03340	281	phn_DUF6 phosphonate utilization associated putati	99.97
PTZ00343	350	triose or hexose phosphate/phosphate translocator;	99.96
TIGR00688	256	rarD rarD protein. This uncharacterized protein is	99.95
PF06027	334	DUF914: Eukaryotic protein of unknown function (DU	99.95
COG0697	292	RhaT Permeases of the drug/metabolite transporter	99.94
COG2962	293	RarD Predicted permeases [General function predict	99.94
COG5006	292	rhtA Threonine/homoserine efflux transporter [Amin	99.92
KOG4510	346	consensus Permease of the drug/metabolite transpor	99.91
TIGR00776	290	RhaT RhaT L-rhamnose-proton symporter family prote	99.89
PF08449	303	UAA: UAA transporter family; InterPro: IPR013657 T	99.86
KOG2765	416	consensus Predicted membrane protein [Function unk	99.85
KOG1441	316	consensus Glucose-6-phosphate/phosphate and phosph	99.78
COG2510	140	Predicted membrane protein [Function unknown]	99.74
PF04142	244	Nuc_sug_transp: Nucleotide-sugar transporter; Inte	99.67
KOG2234	345	consensus Predicted UDP-galactose transporter [Car	99.66
COG2510	140	Predicted membrane protein [Function unknown]	99.65
KOG1444	314	consensus Nucleotide-sugar transporter VRG4/SQV-7	99.63
PF00892	126	EamA: EamA-like transporter family; InterPro: IPR0	99.6
KOG2766	336	consensus Predicted membrane protein [Function unk	99.55
KOG1580	337	consensus UDP-galactose transporter related protei	99.53
KOG1581	327	consensus UDP-galactose transporter related protei	99.51
KOG1443	349	consensus Predicted integral membrane protein [Fun	99.51
PF00892	126	EamA: EamA-like transporter family; InterPro: IPR0	99.43
KOG3912	372	consensus Predicted integral membrane protein [Gen	99.4
TIGR00950	260	2A78 Carboxylate/Amino Acid/Amine Transporter.	99.38
PF06800	269	Sugar_transport: Sugar transport protein; InterPro	99.35
PRK13499	345	rhamnose-proton symporter; Provisional	99.35
PF13536	113	EmrE: Multidrug resistance efflux transporter	99.31
KOG4314	290	consensus Predicted carbohydrate/phosphate translo	99.31
COG5070	309	VRG4 Nucleotide-sugar transporter [Carbohydrate tr	99.27
PF05653	300	Mg_trans_NIPA: Magnesium transporter NIPA; InterPr	99.24
PRK10532	293	threonine and homoserine efflux system; Provisiona	99.24
PRK11272	292	putative DMT superfamily transporter inner membran	99.22
PLN00411	358	nodulin MtN21 family protein; Provisional	99.2
PF03151	153	TPT: Triose-phosphate Transporter family; InterPro	99.2
KOG1442	347	consensus GDP-fucose transporter [Carbohydrate tra	99.18
KOG1583	330	consensus UDP-N-acetylglucosamine transporter [Car	99.17
TIGR03340	281	phn_DUF6 phosphonate utilization associated putati	99.15
PRK11689	295	aromatic amino acid exporter; Provisional	99.12
PRK15430	296	putative chloramphenical resistance permease RarD;	99.08
TIGR00803	222	nst UDP-galactose transporter. NSTs generally appe	99.04
TIGR00688	256	rarD rarD protein. This uncharacterized protein is	99.04
PRK11453	299	O-acetylserine/cysteine export protein; Provisiona	99.02
KOG1582	367	consensus UDP-galactose transporter related protei	98.96
TIGR00817	302	tpt Tpt phosphate/phosphoenolpyruvate translocator	98.91
PRK02971	129	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	98.89
PF03151	153	TPT: Triose-phosphate Transporter family; InterPro	98.88
PRK15051	111	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	98.76
PF13536	113	EmrE: Multidrug resistance efflux transporter	98.76
TIGR00776	290	RhaT RhaT L-rhamnose-proton symporter family prote	98.75
PTZ00343	350	triose or hexose phosphate/phosphate translocator;	98.75
COG4975	288	GlcU Putative glucose uptake permease [Carbohydrat	98.71
COG0697	292	RhaT Permeases of the drug/metabolite transporter	98.71
PRK02971	129	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	98.62
PF06027	334	DUF914: Eukaryotic protein of unknown function (DU	98.53
COG5006	292	rhtA Threonine/homoserine efflux transporter [Amin	98.49
KOG2922	335	consensus Uncharacterized conserved protein [Funct	98.46
COG2962	293	RarD Predicted permeases [General function predict	98.43
PRK15051	111	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	98.43
PF06379	344	RhaT: L-rhamnose-proton symport protein (RhaT); In	98.19
PF06800	269	Sugar_transport: Sugar transport protein; InterPro	98.11
KOG4510	346	consensus Permease of the drug/metabolite transpor	98.1
PF05653	300	Mg_trans_NIPA: Magnesium transporter NIPA; InterPr	98.02
PF08449	303	UAA: UAA transporter family; InterPro: IPR013657 T	98.01
PF10639	113	UPF0546: Uncharacterised protein family UPF0546; I	97.98
PRK10452	120	multidrug efflux system protein MdtJ; Provisional	97.93
PF04657	138	DUF606: Protein of unknown function, DUF606; Inter	97.92
PRK09541	110	emrE multidrug efflux protein; Reviewed	97.85
PRK10650	109	multidrug efflux system protein MdtI; Provisional	97.84
PF04657	138	DUF606: Protein of unknown function, DUF606; Inter	97.75
PRK10452	120	multidrug efflux system protein MdtJ; Provisional	97.73
COG2076	106	EmrE Membrane transporters of cations and cationic	97.71
PRK09541	110	emrE multidrug efflux protein; Reviewed	97.71
KOG1441	316	consensus Glucose-6-phosphate/phosphate and phosph	97.59
PRK11431	105	multidrug efflux system protein; Provisional	97.58
PRK10650	109	multidrug efflux system protein MdtI; Provisional	97.58
COG3238	150	Uncharacterized protein conserved in bacteria [Fun	97.54
PRK11431	105	multidrug efflux system protein; Provisional	97.54
COG2076	106	EmrE Membrane transporters of cations and cationic	97.51
KOG2765	416	consensus Predicted membrane protein [Function unk	97.24
PF07857	254	DUF1632: CEO family (DUF1632); InterPro: IPR012435	97.19
PF04142	244	Nuc_sug_transp: Nucleotide-sugar transporter; Inte	97.19
PF00893	93	Multi_Drug_Res: Small Multidrug Resistance protein	97.14
PF00893	93	Multi_Drug_Res: Small Multidrug Resistance protein	97.13
PRK13499	345	rhamnose-proton symporter; Provisional	97.06
COG3238	150	Uncharacterized protein conserved in bacteria [Fun	96.93
COG4975	288	GlcU Putative glucose uptake permease [Carbohydrat	96.89
PF10639	113	UPF0546: Uncharacterised protein family UPF0546; I	96.44
TIGR00803	222	nst UDP-galactose transporter. NSTs generally appe	96.3
KOG1581	327	consensus UDP-galactose transporter related protei	96.13
KOG2922	335	consensus Uncharacterized conserved protein [Funct	96.02
KOG2234	345	consensus Predicted UDP-galactose transporter [Car	95.98
KOG4831	125	consensus Unnamed protein [Function unknown]	95.82
KOG1580	337	consensus UDP-galactose transporter related protei	95.21
KOG1444	314	consensus Nucleotide-sugar transporter VRG4/SQV-7	94.91
KOG4314	290	consensus Predicted carbohydrate/phosphate translo	94.79
COG5070	309	VRG4 Nucleotide-sugar transporter [Carbohydrate tr	94.19
KOG1443	349	consensus Predicted integral membrane protein [Fun	93.5
PF06379	344	RhaT: L-rhamnose-proton symport protein (RhaT); In	90.7
PF07857	254	DUF1632: CEO family (DUF1632); InterPro: IPR012435	89.97
PRK02237	109	hypothetical protein; Provisional	87.08
KOG1442	347	consensus GDP-fucose transporter [Carbohydrate tra	86.95
KOG2766	336	consensus Predicted membrane protein [Function unk	84.84
KOG3912	372	consensus Predicted integral membrane protein [Gen	84.07
KOG1582	367	consensus UDP-galactose transporter related protei	83.55
PF02694	107	UPF0060: Uncharacterised BCR, YnfA/UPF0060 family;	83.55
PF04342	108	DUF486: Protein of unknown function, DUF486; Inter	82.9
KOG4831	125	consensus Unnamed protein [Function unknown]	82.47

>PLN00411 nodulin MtN21 family protein; Provisional

Probab=100.00  E-value=1e-38  Score=288.55  Aligned_cols=327  Identities=28%  Similarity=0.549  Sum_probs=255.7

Q ss_pred             ccccccHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHhh-cCCCCCCHHHHHHHHHHHH
Q 043160            3 LQYHHAKPYLGVIFMQFCSSIMSIITKIALTQGMSQHVLVAYRMVVATSLIAPFAIVLER-KTRPKMTFRIFAKIALLGL   81 (333)
Q Consensus         3 ~~~~~~~~~l~~~~~~~~~~~~~~~~k~~l~~~~~~~~~~~~r~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~g~   81 (333)
                      ...|+.+.+..|+...+.++...++.|.+++.+++|..+.++|+.++.+++.++...++| +.+++.+++++.++.+.|+
T Consensus         7 ~~~~~~~~~~~~~~~q~~~~~~~~~~k~a~~~G~~~~~~~~~R~~iA~l~Ll~~~~~~~~~~~~~~~~~~~~~~l~l~g~   86 (358)
T PLN00411          7 LWRREAVFLTAMLATETSVVGISTLFKVATSKGLNIYPFLGYSYLLASLLLLPSLFFTNRSRSLPPLSVSILSKIGLLGF   86 (358)
T ss_pred             hhhhccchHHHHHHHHHHHHHHHHHHHHHHHCCCCccHHHHHHHHHHHHHHHHHHHHHHHhcccCcchHHHHHHHHHHHH
Confidence            345678999999999999999999999999999999999999999999999998877655 3334556788899999999


Q ss_pred             HHHHHHHHHHHHHhcccchhhHHHhhchHHHHHHHHHHHHhccccceecccchhhHHHHHHHHHHHHHHHHhcCCcccCC
Q 043160           82 FEPVIGQNLYFTGLKCSTATFTVAMCNILPALTFLMAWIFRLEKVKIKSMRSQAKILGTIVTAGGAMCMTLLKGPILEFP  161 (333)
Q Consensus        82 ~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~ll~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~  161 (333)
                      ++ ...+.++++|+++++++.++++.++.|+++.+++++++.|+++.+||.++.|++|++++++|+.++...+++.....
T Consensus        87 ~g-~~~~~~~~~gl~~tsa~~asll~~~~P~~~~lla~~~~~e~~~~~er~~~~~~~G~~l~~~Gv~ll~~~~g~~~~~~  165 (358)
T PLN00411         87 LG-SMYVITGYIGIEYSNPTLASAISNITPALTFILAIIFRMEKVSFKERSSVAKVMGTILSLIGALVVIFYHGPRVFVA  165 (358)
T ss_pred             HH-HHHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHHhchhhhcccccHHHHHHHHHHHHHHHHHHHccCcccccc
Confidence            99 77888999999999999999999999999999999996455555555555569999999999999875444321000


Q ss_pred             chhhhhhcccCC-CCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCchHHHHHHHHHHHHHHHHHHHhhccCC
Q 043160          162 WKQVRILHNQSE-TGTHNKEEHITKGALMIAAGCFSWSCFIILEAFLLKSYPAELSLTALMCFVSSVEGTILALAIERGN  240 (333)
Q Consensus       162 ~~~~~~~~~~~~-~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (333)
                      ++....+..+.. ....+. .+...|+++.+.++++|++|++.+|+..+++++....++++...+.+...+.....++.+
T Consensus       166 ~~~~~~~~~~~~~~~~~~~-~~~~lG~~l~l~aa~~wa~~~il~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~l~~~~~~  244 (358)
T PLN00411        166 SSPPYLNFRQLSPPLSSSN-SDWLIGGALLTIQGIFVSVSFILQAHIMSEYPAAFTVSFLYTVCVSIVTSMIGLVVEKNN  244 (358)
T ss_pred             cccccccccccccccCCCc-ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHhHHHHHHHHHHHHHHHHHHHHHccCC
Confidence            000000000000 001123 345679999999999999999999999999876667777877777776666666554312


Q ss_pred             ccceeeccchhHHHHHHHHHHHHHHHHHHHHHHhhcCceeeeeccchhHHHHHHHHHHHhccccchhhhHHHHHHHhhhh
Q 043160          241 TGIWLLHFDAKLLSVLYGGFVSCTAYFIMGWLMKRKGPVFVSSFNPLSMVIIAILGSFFIAEELFLGRIVGAIVIVIGLY  320 (333)
Q Consensus       241 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~~  320 (333)
                      ...+....+.....+++.++++.++|.+|++++++.+|++++++.+++|+++++++++++||++++.+++|+++|+.|++
T Consensus       245 ~~~~~~~~~~~~~~i~y~~i~t~lay~lw~~~v~~~ga~~as~~~~L~PV~a~llg~l~LgE~lt~~~~iG~~LIl~Gv~  324 (358)
T PLN00411        245 PSVWIIHFDITLITIVTMAIITSVYYVIHSWTVRHKGPLYLAIFKPLSILIAVVMGAIFLNDSLYLGCLIGGILITLGFY  324 (358)
T ss_pred             cccceeccchHHHHHHHHHHHHHHHHHHHHHHHhccCchHHHHHHhHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHH
Confidence            23332222233445777777766899999999999999999999999999999999999999999999999999999999


Q ss_pred             hheecCCCCCC
Q 043160          321 MVLWGRSKDQS  331 (333)
Q Consensus       321 ~~~~~~~~~~~  331 (333)
                      +..++++||.+
T Consensus       325 l~~~~~~~~~~  335 (358)
T PLN00411        325 AVMWGKANEEK  335 (358)
T ss_pred             HHHhhhhhhhh
Confidence            99987766543

>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional

Probab=100.00  E-value=6.6e-33  Score=246.71  Aligned_cols=285  Identities=16%  Similarity=0.192  Sum_probs=233.4

Q ss_pred             cccccH-HHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHH
Q 043160            4 QYHHAK-PYLGVIFMQFCSSIMSIITKIALTQGMSQHVLVAYRMVVATSLIAPFAIVLERKTRPKMTFRIFAKIALLGLF   82 (333)
Q Consensus         4 ~~~~~~-~~l~~~~~~~~~~~~~~~~k~~l~~~~~~~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~   82 (333)
                      +.|+.. -++..+...++||.++++.|... ++++|.+++++|+.++.++++++...++++   ..+++++.+....|.+
T Consensus         2 ~~~~~~~~~~~~~~~~~iWg~~~~~~K~~~-~~~~p~~~~~~R~~~a~l~ll~~~~~~~~~---~~~~~~~~~~~~~g~~   77 (292)
T PRK11272          2 RFRQLLPLFGALFALYIIWGSTYLVIRIGV-ESWPPLMMAGVRFLIAGILLLAFLLLRGHP---LPTLRQWLNAALIGLL   77 (292)
T ss_pred             chHHHHHHHHHHHHHHHHHhhHHHHHHHHh-ccCCHHHHHHHHHHHHHHHHHHHHHHhCCC---CCcHHHHHHHHHHHHH
Confidence            344443 35667778999999999999994 689999999999999999998876543222   2356778888888888


Q ss_pred             HHHHHHHHHHHHh-cccchhhHHHhhchHHHHHHHHHHHHhccccceecccchhhHHHHHHHHHHHHHHHHhcCCcccCC
Q 043160           83 EPVIGQNLYFTGL-KCSTATFTVAMCNILPALTFLMAWIFRLEKVKIKSMRSQAKILGTIVTAGGAMCMTLLKGPILEFP  161 (333)
Q Consensus        83 ~~~~~~~~~~~al-~~~~~~~~~~l~~~~pi~~~ll~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~  161 (333)
                      +...++.+++++. ++++++.++++.++.|+++.+++.+ +|||+++++      ++|++++++|+.++...+       
T Consensus        78 ~~~~~~~~~~~~~~~~~~a~~a~~l~~~~Pl~~~lla~~-~~e~~~~~~------~~~~~la~~Gv~ll~~~~-------  143 (292)
T PRK11272         78 LLAVGNGMVTVAEHQNVPSGIAAVVVATVPLFTLCFSRL-FGIRTRKLE------WLGIAIGLAGIVLLNSGG-------  143 (292)
T ss_pred             HHHHHHHHHHHHHHccCcHHHHHHHHHHHHHHHHHHHHH-hcccCchhH------HHHHHHHHHhHHHHhcCc-------
Confidence            7677888999999 9999999999999999999999986 699999997      999999999999875210       


Q ss_pred             chhhhhhcccCCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCchHHHHHHHHHHHHHHHHHHHhhccCCc
Q 043160          162 WKQVRILHNQSETGTHNKEEHITKGALMIAAGCFSWSCFIILEAFLLKSYPAELSLTALMCFVSSVEGTILALAIERGNT  241 (333)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (333)
                                      +. +....|+++++.++++||.|.+..||..++  ++...+.+++..+.+...+.....+. +.
T Consensus       144 ----------------~~-~~~~~G~l~~l~a~~~~a~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~-~~  203 (292)
T PRK11272        144 ----------------NL-SGNPWGAILILIASASWAFGSVWSSRLPLP--VGMMAGAAEMLAAGVVLLIASLLSGE-RL  203 (292)
T ss_pred             ----------------cc-ccchHHHHHHHHHHHHHHHHHHHHHhcCCC--cchHHHHHHHHHHHHHHHHHHHHcCC-cc
Confidence                            11 223479999999999999999999986543  34556778888888877777654332 11


Q ss_pred             cceeeccchhHHHHHHHHHH-HHHHHHHHHHHHhhcCceeeeeccchhHHHHHHHHHHHhccccchhhhHHHHHHHhhhh
Q 043160          242 GIWLLHFDAKLLSVLYGGFV-SCTAYFIMGWLMKRKGPVFVSSFNPLSMVIIAILGSFFIAEELFLGRIVGAIVIVIGLY  320 (333)
Q Consensus       242 ~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~a~~~~~~~~~~~~~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~~  320 (333)
                      .  ..++...|..+++.+++ +.+++.+|++++++.+++.++.+.+++|+++.+++++++||++++.+++|+++++.|++
T Consensus       204 ~--~~~~~~~~~~i~~l~i~~s~~~~~l~~~~~~~~~~~~~s~~~~l~Pi~a~i~~~~~l~E~~t~~~iiG~~lIi~gv~  281 (292)
T PRK11272        204 T--ALPTLSGFLALGYLAVFGSIIAISAYMYLLRNVRPALATSYAYVNPVVAVLLGTGLGGETLSPIEWLALGVIVFAVV  281 (292)
T ss_pred             c--ccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHH
Confidence            1  11233568888999999 99999999999999999999999999999999999999999999999999999999999


Q ss_pred             hheecCCC
Q 043160          321 MVLWGRSK  328 (333)
Q Consensus       321 ~~~~~~~~  328 (333)
                      +..+++++
T Consensus       282 ~~~~~~~~  289 (292)
T PRK11272        282 LVTLGKYL  289 (292)
T ss_pred             HHHHHHhh
Confidence            98876654

>PRK11453 O-acetylserine/cysteine export protein; Provisional

Probab=100.00  E-value=2e-32  Score=244.49  Aligned_cols=279  Identities=18%  Similarity=0.250  Sum_probs=216.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 043160           10 PYLGVIFMQFCSSIMSIITKIALTQGMSQHVLVAYRMVVATSLIAPFAIVLERKTRPKMTFRIFAKIALLGLFEPVIGQN   89 (333)
Q Consensus        10 ~~l~~~~~~~~~~~~~~~~k~~l~~~~~~~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~   89 (333)
                      ..++.++++++||.++++.|..+ ++++|..+.++|+.++++.+.++.   .++   +.++   +.....|.+.....+.
T Consensus         5 ~~l~~l~~~~~Wg~~~~~~k~~~-~~~~p~~~~~~R~~~a~~~l~~~~---~~~---~~~~---~~~~~~g~~~~~~~~~   74 (299)
T PRK11453          5 DGVLALLVVVVWGLNFVVIKVGL-HNMPPLMLAGLRFMLVAFPAIFFV---ARP---KVPL---NLLLGYGLTISFGQFA   74 (299)
T ss_pred             HHHHHHHHHHHHhhhHHHHHHHH-hcCCHHHHHHHHHHHHHHHHHHHh---cCC---CCch---HHHHHHHHHHHHHHHH
Confidence            34668899999999999999995 679999999999999877665543   111   1122   2344456655355666


Q ss_pred             HHHHHhcc-cchhhHHHhhchHHHHHHHHHHHHhccccceecccchhhHHHHHHHHHHHHHHHHhcCCcccCCchhhhhh
Q 043160           90 LYFTGLKC-STATFTVAMCNILPALTFLMAWIFRLEKVKIKSMRSQAKILGTIVTAGGAMCMTLLKGPILEFPWKQVRIL  168 (333)
Q Consensus        90 ~~~~al~~-~~~~~~~~l~~~~pi~~~ll~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~~~  168 (333)
                      +++.++++ .+++.++++.++.|+++.+++++++|||+++++      +++++++++|+.++..   +..          
T Consensus        75 ~~~~~~~~~~~a~~a~~l~~~~pi~~~ll~~~~l~e~~~~~~------~~~~~l~~~Gv~ll~~---~~~----------  135 (299)
T PRK11453         75 FLFCAINFGMPAGLASLVLQAQAFFTIVLGAFTFGERLQGKQ------LAGIALAIFGVLVLIE---DSL----------  135 (299)
T ss_pred             HHHHHHHhcCCHHHHHHHHHhHHHHHHHHHHHHhcCcCcHHH------HHHHHHHHHhHHHhcc---ccC----------
Confidence            77889988 588999999999999999999999999999997      9999999999999872   110          


Q ss_pred             cccCCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCc--hHHHHHHHHHHHHHHHHHHHhhccCCc---cc
Q 043160          169 HNQSETGTHNKEEHITKGALMIAAGCFSWSCFIILEAFLLKSYPAE--LSLTALMCFVSSVEGTILALAIERGNT---GI  243 (333)
Q Consensus       169 ~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~  243 (333)
                              .+. +....|+++++.++++|++|.+.+|+..++.+++  .....+.+..+.+.........++ +.   ..
T Consensus       136 --------~~~-~~~~~G~~l~l~aal~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~  205 (299)
T PRK11453        136 --------NGQ-HVAMLGFMLTLAAAFSWACGNIFNKKIMSHSTRPAVMSLVVWSALIPIIPFFVASLILDG-SATMIHS  205 (299)
T ss_pred             --------CCc-chhHHHHHHHHHHHHHHHHHHHHHHHHhcccCccchhHHHHHHHHHHHHHHHHHHHHhcC-chhhhhh
Confidence                    122 3335799999999999999999999977665432  333445555554444444333332 11   11


Q ss_pred             eeeccchhHHHHHHHHHH-HHHHHHHHHHHHhhcCceeeeeccchhHHHHHHHHHHHhccccchhhhHHHHHHHhhhhhh
Q 043160          244 WLLHFDAKLLSVLYGGFV-SCTAYFIMGWLMKRKGPVFVSSFNPLSMVIIAILGSFFIAEELFLGRIVGAIVIVIGLYMV  322 (333)
Q Consensus       244 ~~~~~~~~~~~l~~~~~~-~~~~~~~~~~a~~~~~~~~~~~~~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~~~~  322 (333)
                      +...+...|..+++++++ +.++|.+|++++++.++.+++.+.+++|+++.+++++++||++++.+++|++++++|+++.
T Consensus       206 ~~~~~~~~~~~l~~l~i~~t~~~~~l~~~~l~~~~a~~~s~~~~l~Pv~a~~~~~l~lgE~~~~~~~iG~~lI~~gv~l~  285 (299)
T PRK11453        206 LVTIDMTTILSLMYLAFVATIVGYGIWGTLLGRYETWRVAPLSLLVPVVGLASAALLLDERLTGLQFLGAVLIMAGLYIN  285 (299)
T ss_pred             hccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHH
Confidence            112233678889999999 9999999999999999999999999999999999999999999999999999999999998


Q ss_pred             eecCC
Q 043160          323 LWGRS  327 (333)
Q Consensus       323 ~~~~~  327 (333)
                      .++++
T Consensus       286 ~~~~~  290 (299)
T PRK11453        286 VFGLR  290 (299)
T ss_pred             hcchh
Confidence            76654

>PRK15430 putative chloramphenical resistance permease RarD; Provisional

Probab=100.00  E-value=8e-33  Score=246.53  Aligned_cols=280  Identities=12%  Similarity=0.052  Sum_probs=208.2

Q ss_pred             CcccccccHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHhhcCC--C-CCCHHHHHHHH
Q 043160            1 MILQYHHAKPYLGVIFMQFCSSIMSIITKIALTQGMSQHVLVAYRMVVATSLIAPFAIVLERKTR--P-KMTFRIFAKIA   77 (333)
Q Consensus         1 m~~~~~~~~~~l~~~~~~~~~~~~~~~~k~~l~~~~~~~~~~~~r~~~~~~~l~~~~~~~~~~~~--~-~~~~~~~~~~~   77 (333)
                      |+|+ ++.+|.+++++++++||.+++..|..  ++++|.++.++|+.++.+++.++...+++++.  + ..+++++.. .
T Consensus         1 ~~~~-~~~~g~~~~l~a~~~wg~~~~~~k~~--~~~~~~~~~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~   76 (296)
T PRK15430          1 MDAK-QTRQGVLLALAAYFIWGIAPAYFKLI--YYVPADEILTHRVIWSFFFMVVLMSICRQWSYLKTLIQTPQKIFM-L   76 (296)
T ss_pred             CCch-hhhhHHHHHHHHHHHHHHHHHHHHHh--cCCCHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHcCHHHHHH-H
Confidence            7787 55689999999999999999999986  46999999999999999888776544322110  0 112333333 3


Q ss_pred             HHHHHHHHHHHHHHHHHhcccchhhHHHhhchHHHHHHHHHHHHhccccceecccchhhHHHHHHHHHHHHHHHHhcCCc
Q 043160           78 LLGLFEPVIGQNLYFTGLKCSTATFTVAMCNILPALTFLMAWIFRLEKVKIKSMRSQAKILGTIVTAGGAMCMTLLKGPI  157 (333)
Q Consensus        78 ~~g~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~ll~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~~~~  157 (333)
                      ..+.++.+.++.++++|++++|+++++++.++.|+++.+++++++|||+++++      ++|++++++|+.++...+   
T Consensus        77 ~~~~~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E~~~~~~------~~g~~l~~~Gv~li~~~~---  147 (296)
T PRK15430         77 AVSAVLIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGERFRRMQ------WLAVILAICGVLVQLWTF---  147 (296)
T ss_pred             HHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCCCcHHH------HHHHHHHHHHHHHHHHHc---
Confidence            45666668899999999999999999999999999999999999999999998      999999999999986210   


Q ss_pred             ccCCchhhhhhcccCCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhCC-CchHHHHHHHHHHHHHHHHHHHhh
Q 043160          158 LEFPWKQVRILHNQSETGTHNKEEHITKGALMIAAGCFSWSCFIILEAFLLKSYP-AELSLTALMCFVSSVEGTILALAI  236 (333)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~  236 (333)
                                          ++ .     ..+++.++++||.|.+..|+..++.. +....+.+....+.....+.   .
T Consensus       148 --------------------~~-~-----~~~~l~aa~~~a~~~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~  198 (296)
T PRK15430        148 --------------------GS-L-----PIIALGLAFSFAFYGLVRKKIAVEAQTGMLIETMWLLPVAAIYLFAI---A  198 (296)
T ss_pred             --------------------CC-c-----cHHHHHHHHHHHHHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHHH---c
Confidence                                11 1     14678889999999999888643221 11222233333333222111   1


Q ss_pred             ccCCccceeeccchhHHHHHHHHHHHHHHHHHHHHHHhhcCceeeeeccchhHHHHHHHHHHHhccccchhhhHHHHHHH
Q 043160          237 ERGNTGIWLLHFDAKLLSVLYGGFVSCTAYFIMGWLMKRKGPVFVSSFNPLSMVIIAILGSFFIAEELFLGRIVGAIVIV  316 (333)
Q Consensus       237 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~  316 (333)
                      +. ....+...+...+..+...++.+.+++.++++++++.++++++.+.+++|+++.+++++++||++++.+++|+++|+
T Consensus       199 ~~-~~~~~~~~~~~~~~~~~~~g~~t~i~~~~~~~a~~~~~a~~~s~~~~l~Pv~a~~~g~l~l~E~~~~~~~~G~~lI~  277 (296)
T PRK15430        199 DS-STSHMGQNPMSLNLLLIAAGIVTTVPLLCFTAAATRLRLSTLGFFQYIGPTLMFLLAVTFYGEKPGADKMVTFAFIW  277 (296)
T ss_pred             cC-CcccccCCcHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHH
Confidence            11 11111111112233344445558899999999999999999999999999999999999999999999999999998


Q ss_pred             hhhhhhe
Q 043160          317 IGLYMVL  323 (333)
Q Consensus       317 ~g~~~~~  323 (333)
                      .|+.+..
T Consensus       278 ~~~~v~~  284 (296)
T PRK15430        278 VALAIFV  284 (296)
T ss_pred             HHHHHHH
Confidence            8866654

>PRK11689 aromatic amino acid exporter; Provisional

Probab=100.00  E-value=2.3e-32  Score=243.45  Aligned_cols=286  Identities=13%  Similarity=0.075  Sum_probs=214.8

Q ss_pred             ccHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHH
Q 043160            7 HAKPYLGVIFMQFCSSIMSIITKIALTQGMSQHVLVAYRMVVATSLIAPFAIVLERKTRPKMTFRIFAKIALLGLFEPVI   86 (333)
Q Consensus         7 ~~~~~l~~~~~~~~~~~~~~~~k~~l~~~~~~~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   86 (333)
                      +.++.++++.+.++||.+++..|..+ ++++|..+.++|+.++.+++.++.   .+   ++.++++++ ..+.+.+....
T Consensus         2 ~~~~~l~~l~a~~~Wg~~~~~~k~~~-~~~~P~~~~~~R~~~a~l~l~~~~---~~---~~~~~~~~~-~~~~~~l~~~~   73 (295)
T PRK11689          2 SQKATLIGLIAILLWSTMVGLIRGVS-ESLGPVGGAAMIYSVSGLLLLLTV---GF---PRLRQFPKR-YLLAGGLLFVS   73 (295)
T ss_pred             CcchhHHHHHHHHHHHHHHHHHHHHH-ccCChHHHHHHHHHHHHHHHHHHc---cc---cccccccHH-HHHHHhHHHHH
Confidence            56788999999999999999999994 779999999999999999888653   11   111222222 34445555567


Q ss_pred             HHHHHHHHhc----ccchhhHHHhhchHHHHHHHHHHHHhccccceecccchhhHHHHHHHHHHHHHHHHhcCCcccCCc
Q 043160           87 GQNLYFTGLK----CSTATFTVAMCNILPALTFLMAWIFRLEKVKIKSMRSQAKILGTIVTAGGAMCMTLLKGPILEFPW  162 (333)
Q Consensus        87 ~~~~~~~al~----~~~~~~~~~l~~~~pi~~~ll~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~  162 (333)
                      ++.+++.+++    .+++++++++.++.|+++.+++++++|||+++++      ++|++++++|+.++..   ++...  
T Consensus        74 ~~~~~~~a~~~~~~~~~a~~a~~l~~~~Pi~~~ll~~~~~~e~~~~~~------~~g~~l~~~Gv~li~~---~~~~~--  142 (295)
T PRK11689         74 YEICLALSLGYANTRRQAIEVGMVNYLWPSLTILFAVLFNGQKANWLL------IPGLLLALAGVAWVLG---GDNGL--  142 (295)
T ss_pred             HHHHHHHHHHHhhccccchHHHHHHHHhHHHHHHHHHHHhcCCccHHH------HHHHHHHHHhHhheec---CCccc--
Confidence            7777777775    4678888999999999999999999999999997      9999999999999872   11100  


Q ss_pred             hhhhhhcccCCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCchHHHHHHHHHHHHHHHHHHHhhccCCcc
Q 043160          163 KQVRILHNQSETGTHNKEEHITKGALMIAAGCFSWSCFIILEAFLLKSYPAELSLTALMCFVSSVEGTILALAIERGNTG  242 (333)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (333)
                      +..+.+        .+. .+...|+++++.++++||+|++..||..++. ++.+..   ...+.+.+.+.... ++ +. 
T Consensus       143 ~~~~~~--------~~~-~~~~~G~~~~l~aa~~~A~~~v~~k~~~~~~-~~~~~~---~~~~~~~l~~~~~~-~~-~~-  206 (295)
T PRK11689        143 SLAELI--------NNI-ASNPLSYGLAFIGAFIWAAYCNVTRKYARGK-NGITLF---FILTALALWIKYFL-SP-QP-  206 (295)
T ss_pred             hhhhhh--------hcc-ccChHHHHHHHHHHHHHHHHHHHHhhccCCC-CchhHH---HHHHHHHHHHHHHH-hc-Cc-
Confidence            000000        011 2234699999999999999999999986665 445332   22333333333322 22 11 


Q ss_pred             ceeeccchhHHHHHHHHHHHHHHHHHHHHHHhhcCceeeeeccchhHHHHHHHHHHHhccccchhhhHHHHHHHhhhhhh
Q 043160          243 IWLLHFDAKLLSVLYGGFVSCTAYFIMGWLMKRKGPVFVSSFNPLSMVIIAILGSFFIAEELFLGRIVGAIVIVIGLYMV  322 (333)
Q Consensus       243 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~~~~  322 (333)
                      ... .+...|..+++.++.+.++|.+|++++++.++++++.+.+++|+++.+++++++||++++.+++|+++|+.|+++.
T Consensus       207 ~~~-~~~~~~~~l~~~~~~t~~~~~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~~~lgE~~~~~~~iG~~lI~~gv~~~  285 (295)
T PRK11689        207 AMV-FSLPAIIKLLLAAAAMGFGYAAWNVGILHGNMTLLATASYFTPVLSAALAALLLSTPLSFSFWQGVAMVTAGSLLC  285 (295)
T ss_pred             ccc-CCHHHHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHhHHHH
Confidence            111 2235677777777559999999999999999999999999999999999999999999999999999999999888


Q ss_pred             eecCCC
Q 043160          323 LWGRSK  328 (333)
Q Consensus       323 ~~~~~~  328 (333)
                      ...+++
T Consensus       286 ~~~~~~  291 (295)
T PRK11689        286 WLATRR  291 (295)
T ss_pred             hhhHhH
Confidence            765543

>PRK10532 threonine and homoserine efflux system; Provisional

Probab=100.00  E-value=5.1e-31  Score=234.62  Aligned_cols=281  Identities=11%  Similarity=0.065  Sum_probs=222.2

Q ss_pred             cccccHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHH
Q 043160            4 QYHHAKPYLGVIFMQFCSSIMSIITKIALTQGMSQHVLVAYRMVVATSLIAPFAIVLERKTRPKMTFRIFAKIALLGLFE   83 (333)
Q Consensus         4 ~~~~~~~~l~~~~~~~~~~~~~~~~k~~l~~~~~~~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~   83 (333)
                      |..+.+++.+++++.++|+.++.+.|+++ ++++|..+.++|+.++.++++++..  .++  ++.++++++.....|.+.
T Consensus         7 ~~~~~~~~~~~~la~~~~~~~~~~~K~~~-~~~~~~~~~~~R~~~a~l~l~~~~~--~~~--~~~~~~~~~~~~~~g~~~   81 (293)
T PRK10532          7 KLPVWLPILLLLIAMASIQSGASLAKSLF-PLVGAPGVTALRLALGTLILIAIFK--PWR--LRFAKEQRLPLLFYGVSL   81 (293)
T ss_pred             ccccchHHHHHHHHHHHHHhhHHHHHHHH-HHcCHHHHHHHHHHHHHHHHHHHHh--HHh--ccCCHHHHHHHHHHHHHH
Confidence            34567899999999999999999999996 5699999999999999988886642  222  234567788888888876


Q ss_pred             HHHHHHHHHHHhcccchhhHHHhhchHHHHHHHHHHHHhccccceecccchhhHHHHHHHHHHHHHHHHhcCCcccCCch
Q 043160           84 PVIGQNLYFTGLKCSTATFTVAMCNILPALTFLMAWIFRLEKVKIKSMRSQAKILGTIVTAGGAMCMTLLKGPILEFPWK  163 (333)
Q Consensus        84 ~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~ll~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~  163 (333)
                       ...+.+++++++++|++.++++.++.|+++.+++.    ||..  +      ..++.++++|+.++.. .+.       
T Consensus        82 -~~~~~~~~~al~~~~~~~a~~l~~t~Pi~~~ll~~----~~~~--~------~~~~~i~~~Gv~li~~-~~~-------  140 (293)
T PRK10532         82 -GGMNYLFYLSIQTVPLGIAVALEFTGPLAVALFSS----RRPV--D------FVWVVLAVLGLWFLLP-LGQ-------  140 (293)
T ss_pred             -HHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHhc----CChH--H------HHHHHHHHHHHheeee-cCC-------
Confidence             88889999999999999999999999999998863    4432  2      4567788999988751 110       


Q ss_pred             hhhhhcccCCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCchHHHHHHHHHHHHHHHHHHHhhccCCccc
Q 043160          164 QVRILHNQSETGTHNKEEHITKGALMIAAGCFSWSCFIILEAFLLKSYPAELSLTALMCFVSSVEGTILALAIERGNTGI  243 (333)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (333)
                                   +.. +....|+++++.++++|++|.+..|+..++. ++... .+....+.+...+.....+  ....
T Consensus       141 -------------~~~-~~~~~G~ll~l~aa~~~a~~~v~~r~~~~~~-~~~~~-~~~~~~~~~~l~~~~~~~~--~~~~  202 (293)
T PRK10532        141 -------------DVS-HVDLTGAALALGAGACWAIYILSGQRAGAEH-GPATV-AIGSLIAALIFVPIGALQA--GEAL  202 (293)
T ss_pred             -------------Ccc-cCChHHHHHHHHHHHHHHHHHHHHHHHhccC-CchHH-HHHHHHHHHHHHHHHHHcc--Cccc
Confidence                         011 2234799999999999999999999987665 44544 4555666666666664322  1111


Q ss_pred             eeeccchhHHHHHHHHHH-HHHHHHHHHHHHhhcCceeeeeccchhHHHHHHHHHHHhccccchhhhHHHHHHHhhhhhh
Q 043160          244 WLLHFDAKLLSVLYGGFV-SCTAYFIMGWLMKRKGPVFVSSFNPLSMVIIAILGSFFIAEELFLGRIVGAIVIVIGLYMV  322 (333)
Q Consensus       244 ~~~~~~~~~~~l~~~~~~-~~~~~~~~~~a~~~~~~~~~~~~~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~~~~  322 (333)
                         .+...|..++++|++ +.++|.+|++++++.++++++.+.+++|+++.+++++++||++++.+++|+++|++|++..
T Consensus       203 ---~~~~~~~~~l~lgv~~t~~~~~l~~~~~~~~~a~~as~~~~l~Pv~a~l~~~l~lgE~~~~~~~iG~~lIl~~~~~~  279 (293)
T PRK10532        203 ---WHWSILPLGLAVAILSTALPYSLEMIALTRLPTRTFGTLMSMEPALAAVSGMIFLGETLTLIQWLALGAIIAASMGS  279 (293)
T ss_pred             ---CCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHH
Confidence               122445566789999 9999999999999999999999999999999999999999999999999999999999988


Q ss_pred             eecCCCCCC
Q 043160          323 LWGRSKDQS  331 (333)
Q Consensus       323 ~~~~~~~~~  331 (333)
                      .+..+||.|
T Consensus       280 ~~~~~~~~~  288 (293)
T PRK10532        280 TLTIRREPK  288 (293)
T ss_pred             HhcCCCCCC
Confidence            776655544

>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter

Probab=100.00  E-value=5.1e-31  Score=231.21  Aligned_cols=257  Identities=18%  Similarity=0.220  Sum_probs=217.2

Q ss_pred             HHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccch
Q 043160           21 SSIMSIITKIALTQGMSQHVLVAYRMVVATSLIAPFAIVLERKTRPKMTFRIFAKIALLGLFEPVIGQNLYFTGLKCSTA  100 (333)
Q Consensus        21 ~~~~~~~~k~~l~~~~~~~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~  100 (333)
                      ||.+++..|..++++.++....+.|...+.+++.++...+       .+++++.+....|.++..+++.++++|++++++
T Consensus         1 Wg~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~-------~~~~~~~~~~~~~~~~~~l~~~~~~~a~~~~~~   73 (260)
T TIGR00950         1 WGTTGVVIGQYLEGQVPLYFAVFRRLIFALLLLLPLLRRR-------PPLKRLLRLLLLGALQIGVFYVLYFVAVKRLPV   73 (260)
T ss_pred             CcchHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhc-------cCHhHHHHHHHHHHHHHHHHHHHHHHHHHhcCh
Confidence            8999999999977789999999999999988887754321       235667778888888879999999999999999


Q ss_pred             hhHHHhhchHHHHHHHHHHHHhccccceecccchhhHHHHHHHHHHHHHHHHhcCCcccCCchhhhhhcccCCCCCCCcc
Q 043160          101 TFTVAMCNILPALTFLMAWIFRLEKVKIKSMRSQAKILGTIVTAGGAMCMTLLKGPILEFPWKQVRILHNQSETGTHNKE  180 (333)
Q Consensus       101 ~~~~~l~~~~pi~~~ll~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  180 (333)
                      ++++++.++.|+++.+++.+++|||+++++      ++|++++++|+.++.. ++                      +. 
T Consensus        74 ~~~~ii~~~~P~~~~~~~~l~~~e~~~~~~------~~gi~i~~~Gv~li~~-~~----------------------~~-  123 (260)
T TIGR00950        74 GEAALLLYLAPLYVTLLSDLMGKERPRKLV------LLAAVLGLAGAVLLLS-DG----------------------NL-  123 (260)
T ss_pred             hhhHHHHhhhHHHHHHHHHHHccCCCcHHH------HHHHHHHHHhHHhhcc-CC----------------------cc-
Confidence            999999999999999999999999999997      9999999999999761 10                      12 


Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHHHHhhhCCC-chHHHHHHHHHHHHHHHHHHHhhccCCccceeeccchhHHHHHHHH
Q 043160          181 EHITKGALMIAAGCFSWSCFIILEAFLLKSYPA-ELSLTALMCFVSSVEGTILALAIERGNTGIWLLHFDAKLLSVLYGG  259 (333)
Q Consensus       181 ~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  259 (333)
                      +....|+.+++.++++|+.+.+..|+..++.+. +.....+.+..+.+...+.....++ + ...   +...|..+++.+
T Consensus       124 ~~~~~G~~~~l~a~~~~a~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-~-~~~---~~~~~~~~~~~~  198 (260)
T TIGR00950       124 SINPAGLLLGLGSGISFALGTVLYKRLVKKEGPELLQFTGWVLLLGALLLLPFAWFLGP-N-PQA---LSLQWGALLYLG  198 (260)
T ss_pred             cccHHHHHHHHHHHHHHHHHHHHHhHHhhcCCchHHHHHHHHHHHHHHHHHHHHHhcCC-C-CCc---chHHHHHHHHHH
Confidence            334579999999999999999999998776542 3445557788888888888765432 1 111   335677788889


Q ss_pred             HH-HHHHHHHHHHHHhhcCceeeeeccchhHHHHHHHHHHHhccccchhhhHHHHHHHhhh
Q 043160          260 FV-SCTAYFIMGWLMKRKGPVFVSSFNPLSMVIIAILGSFFIAEELFLGRIVGAIVIVIGL  319 (333)
Q Consensus       260 ~~-~~~~~~~~~~a~~~~~~~~~~~~~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~  319 (333)
                      ++ +.+++.++++++++.++++++.+.+++|+++.+++++++||++++.+++|+++++.|+
T Consensus       199 ~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~ll~~~~~~E~~~~~~~~G~~li~~g~  259 (260)
T TIGR00950       199 LIGTALAYFLWNKGLTLVDPSAASILALAEPLVALLLGLLILGETLSLPQLIGGALIIAAV  259 (260)
T ss_pred             HHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhc
Confidence            88 8999999999999999999999999999999999999999999999999999999986

>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator

Probab=100.00  E-value=1.3e-30  Score=233.41  Aligned_cols=289  Identities=13%  Similarity=0.093  Sum_probs=225.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHHH
Q 043160           11 YLGVIFMQFCSSIMSIITKIALTQGMSQHVLVAYRMVVATSLIAPFAIVLERKTRPKMTFRIFAKIALLGLFEPVIGQNL   90 (333)
Q Consensus        11 ~l~~~~~~~~~~~~~~~~k~~l~~~~~~~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~   90 (333)
                      .++.+...++-....+.+|.++++...|..+++.|+.++.+...+.. ....+++++.+++++++.+..|++. +.++.+
T Consensus         4 ~~~~~~w~~~~~~~~~~NK~~l~~~~~P~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~   81 (302)
T TIGR00817         4 GLLFGLWYFLNVYFNIYNKKLLNVFPYPYFKTLISLAVGSLYCLLSW-SSGLPKRLKISSALLKLLLPVAIVH-TIGHVT   81 (302)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhCChhHHHHHHHHHHHHHHHHHHH-HhCCCCCCCCCHHHHHHHHHHHHHH-HHHHHH
Confidence            34455555666666788999975447799999999999877766542 1122334567789999999999998 899999


Q ss_pred             HHHHhcccchhhHHHhhchHHHHHHHHHHHHhccccceecccchhhHHHHHHHHHHHHHHHHhcCCcccCCchhhhhhcc
Q 043160           91 YFTGLKCSTATFTVAMCNILPALTFLMAWIFRLEKVKIKSMRSQAKILGTIVTAGGAMCMTLLKGPILEFPWKQVRILHN  170 (333)
Q Consensus        91 ~~~al~~~~~~~~~~l~~~~pi~~~ll~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~  170 (333)
                      .++++++++++.++++.++.|+++++++++++|||+++++      +++++++++|+.+..   +               
T Consensus        82 ~~~~l~~~s~s~~~li~~~~Pv~~~ll~~~~~~e~~~~~~------~~~l~l~~~Gv~l~~---~---------------  137 (302)
T TIGR00817        82 SNVSLSKVAVSFTHTIKAMEPFFSVVLSAFFLGQEFPSTL------WLSLLPIVGGVALAS---D---------------  137 (302)
T ss_pred             HHHHHHhccHHHHHHHHhcchHHHHHHHHHHhCCCCcHHH------HHHHHHHHHHHhhhc---C---------------
Confidence            9999999999999999999999999999999999999997      999999999998753   1               


Q ss_pred             cCCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHhh--hCCCchHHHHHHHHHHHHHHHHHHHhhccCCccc--ee-
Q 043160          171 QSETGTHNKEEHITKGALMIAAGCFSWSCFIILEAFLLK--SYPAELSLTALMCFVSSVEGTILALAIERGNTGI--WL-  245 (333)
Q Consensus       171 ~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~-  245 (333)
                            .+. +....|+++++.++++|+++.+..||..+  +. ++.+.+.+++..+.+.+.|.....++.+...  +. 
T Consensus       138 ------~~~-~~~~~G~~~~l~a~~~~a~~~v~~k~~~~~~~~-~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~  209 (302)
T TIGR00817       138 ------TEL-SFNWAGFLSAMISNITFVSRNIFSKKAMTIKSL-DKTNLYAYISIMSLFLLSPPAFITEGPPFLPHGFMQ  209 (302)
T ss_pred             ------Ccc-cccHHHHHHHHHHHHHHHHHHHHHHHhhccCCC-CcccHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHH
Confidence                  112 33457999999999999999999999877  44 5788999999999999999887655311111  00 


Q ss_pred             ----eccchhHHHHHHHHHH-HHHHHHHHHHHHhhcCceeeeeccchhHHHHHHHHHHHhccccchhhhHHHHHHHhhhh
Q 043160          246 ----LHFDAKLLSVLYGGFV-SCTAYFIMGWLMKRKGPVFVSSFNPLSMVIIAILGSFFIAEELFLGRIVGAIVIVIGLY  320 (333)
Q Consensus       246 ----~~~~~~~~~l~~~~~~-~~~~~~~~~~a~~~~~~~~~~~~~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~~  320 (333)
                          ......+......++. ....+.++++++++.++++.++..+++|+++++++++++||++++.+++|++++++|++
T Consensus       210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~sa~t~sv~~~l~pv~~~~~~~~~lge~lt~~~~~G~~lil~Gv~  289 (302)
T TIGR00817       210 AISGVNVTKIYTVSLVAAMGFFHFYQQVAFMLLGRVSPLTHSVGNCMKRVVVIVVSILFFGTKISPQQVFGTGIAIAGVF  289 (302)
T ss_pred             hhcccCchHHHHHHHHHHHHHHHHHHHHHHHHHccCCchHHHHHhhhhhhheeeeehhhcCCCCchhHHHHHHHHHHHHH
Confidence                0000112112222222 22333466689999999999999999999999999999999999999999999999999


Q ss_pred             hheecCCCCCCCC
Q 043160          321 MVLWGRSKDQSPS  333 (333)
Q Consensus       321 ~~~~~~~~~~~~~  333 (333)
                      ++.+.|+++++.|
T Consensus       290 l~~~~k~~~~~~~  302 (302)
T TIGR00817       290 LYSRVKAQKPKPK  302 (302)
T ss_pred             HHHHHhccCcCCC
Confidence            9998877666654

specificities overlap.

>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein

Probab=99.97  E-value=4.7e-28  Score=214.44  Aligned_cols=273  Identities=16%  Similarity=0.205  Sum_probs=199.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHh-hcCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 043160           11 YLGVIFMQFCSSIMSIITKIALTQGMSQHVLVAYRMVVATSLIAPFAIVLE-RKTRPKMTFRIFAKIALLGLFEPVIGQN   89 (333)
Q Consensus        11 ~l~~~~~~~~~~~~~~~~k~~l~~~~~~~~~~~~r~~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~   89 (333)
                      +++.++++++|+..++..|... ++-++  ..+++...+.+.+.++...+. ++.++..+++.+..... +.++...++.
T Consensus         3 ~~~~~~aa~~~a~~~~~~k~~~-~~~~~--~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~   78 (281)
T TIGR03340         3 LTLVVFSALMHAGWNLMAKSHA-DKEPD--FLWWALLAHSVLLTPYGLWYLAQVGWSRLPATFWLLLAI-SAVANMVYFL   78 (281)
T ss_pred             HHHHHHHHHHHHHHHHHHhhcC-CchhH--HHHHHHHHHHHHHHHHHHHhcccCCCCCcchhhHHHHHH-HHHHHHHHHH
Confidence            5788999999999999999763 43333  347777777777877765432 22333334444444444 4444489999


Q ss_pred             HHHHHhcccchhhHHHhhchHHHHHHHHHHHHhccccceecccchhhHHHHHHHHHHHHHHHHhcCCcccCCchhhhhhc
Q 043160           90 LYFTGLKCSTATFTVAMCNILPALTFLMAWIFRLEKVKIKSMRSQAKILGTIVTAGGAMCMTLLKGPILEFPWKQVRILH  169 (333)
Q Consensus        90 ~~~~al~~~~~~~~~~l~~~~pi~~~ll~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~~~~  169 (333)
                      ++++|+++.|++.++++.++.|+++.+++++++|||+++++      ++|+.++++|+.++..   ++            
T Consensus        79 ~~~~a~~~~~~~~~~~l~~~~p~~~~l~~~~~~~e~~~~~~------~~g~~~~~~Gv~ll~~---~~------------  137 (281)
T TIGR03340        79 GLAQAYHHADVGLVYPLARSSPLLVAIWATLTLGETLSPLA------WLGILIITLGLLVLGL---SR------------  137 (281)
T ss_pred             HHHHHHhcCChhhhhhHHhhhHHHHHHHHHHHHcCCCCHHH------HHHHHHHHHHHHHHhc---cc------------
Confidence            99999999999999999999999999999999999999998      9999999999998762   11            


Q ss_pred             ccCCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCchH---HHHHHHHHHHHHHHHHHHhhccCCccceee
Q 043160          170 NQSETGTHNKEEHITKGALMIAAGCFSWSCFIILEAFLLKSYPAELS---LTALMCFVSSVEGTILALAIERGNTGIWLL  246 (333)
Q Consensus       170 ~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (333)
                              .. .....|+.+++.++++|++|.+..|+..++.++...   ...+.....++...+.....++   .... 
T Consensus       138 --------~~-~~~~~g~~~~l~aal~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~-  204 (281)
T TIGR03340       138 --------FA-QHRRKAYAWALAAALGTAIYSLSDKAAALGVPAFYSALGYLGIGFLAMGWPFLLLYLKRHG---RSMF-  204 (281)
T ss_pred             --------cc-ccchhHHHHHHHHHHHHHHhhhhccccccchhcccccHHHHHHHHHHHHHHHHHHHHHHhc---cchh-
Confidence                    11 112357788999999999999998876444332111   2222222221111221111111   1111 


Q ss_pred             ccchhHHHHHHHHHH-HHHHHHHHHHHHhhcCceeeeeccchhHHHHHHHHHHHhccccchhhhHHHHHHHhhhhh
Q 043160          247 HFDAKLLSVLYGGFV-SCTAYFIMGWLMKRKGPVFVSSFNPLSMVIIAILGSFFIAEELFLGRIVGAIVIVIGLYM  321 (333)
Q Consensus       247 ~~~~~~~~l~~~~~~-~~~~~~~~~~a~~~~~~~~~~~~~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~~~  321 (333)
                      .....+..+++.+.+ +.++|.+|++++++.++++++.+.+++|+++.+++++++||++++.+++|++++++|+++
T Consensus       205 ~~~~~~~~~~~~~~~~s~l~~~l~~~al~~~~a~~~~~~~~l~pv~a~l~g~~~lgE~~~~~~~iG~~lil~Gv~l  280 (281)
T TIGR03340       205 PYARQILPSATLGGLMIGGAYALVLWAMTRLPVATVVALRNTSIVFAVVLGIWFLNERWYLTRLMGVCIIVAGLVV  280 (281)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCceEEEeecccHHHHHHHHHHHHhCCCccHHHHHHHHHHHHhHHh
Confidence            122334555666777 999999999999999999999999999999999999999999999999999999999875

This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.

>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional

Probab=99.96  E-value=3.3e-27  Score=214.48  Aligned_cols=285  Identities=14%  Similarity=0.135  Sum_probs=225.1

Q ss_pred             ccHHHHHHHHHHHHHHHHHHHHHHHHhcCCC-HHHHHHHHHHHHHHHHHHHHHHHhhcCCCCC--CHHHHHHHHHHHHHH
Q 043160            7 HAKPYLGVIFMQFCSSIMSIITKIALTQGMS-QHVLVAYRMVVATSLIAPFAIVLERKTRPKM--TFRIFAKIALLGLFE   83 (333)
Q Consensus         7 ~~~~~l~~~~~~~~~~~~~~~~k~~l~~~~~-~~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~--~~~~~~~~~~~g~~~   83 (333)
                      +.+..++.+....+-......+|.++ +.++ |..++.+|++++.++...+... +.++.++.  .+++++.++..|+++
T Consensus        47 ~~~~~~~~~~wy~~s~~~~~~nK~vl-~~~~~P~~l~~~~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~llp~gl~~  124 (350)
T PTZ00343         47 KWKLALLFLTWYALNVLYVVDNKLAL-NMLPLPWTISSLQLFVGWLFALLYWAT-GFRKIPRIKSLKLFLKNFLPQGLCH  124 (350)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHHH-HhCChhHHHHHHHHHHHHHHHHHHHHh-CCCCCCCCCCHHHHHHHHHHHHHHH
Confidence            45667777788888888899999997 5589 9999999999998876554322 22222333  345788999999999


Q ss_pred             HHHHHHHHHHHhcccchhhHHHhhchHHHHHHHHHHHHhccccceecccchhhHHHHHHHHHHHHHHHHhcCCcccCCch
Q 043160           84 PVIGQNLYFTGLKCSTATFTVAMCNILPALTFLMAWIFRLEKVKIKSMRSQAKILGTIVTAGGAMCMTLLKGPILEFPWK  163 (333)
Q Consensus        84 ~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~ll~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~  163 (333)
                       ...+...+.|+++++++.++++..+.|+++++++++++|||+++++      +++++++++|+.+...           
T Consensus       125 -~~~~~~~~~sl~~~svs~~~iika~~Pvft~lls~~~l~ek~s~~~------~l~l~l~v~Gv~l~~~-----------  186 (350)
T PTZ00343        125 -LFVHFGAVISMGLGAVSFTHVVKAAEPVFTALLSILFLKQFLNLYA------YLSLIPIVGGVALASV-----------  186 (350)
T ss_pred             -HHHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHhCCCccHHH------HHHHHHHHHHHHheec-----------
Confidence             5557777899999999999999999999999999999999999997      9999999999999762           


Q ss_pred             hhhhhcccCCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhCC------CchHHHHHHHHHHHHHHHHHHHhhc
Q 043160          164 QVRILHNQSETGTHNKEEHITKGALMIAAGCFSWSCFIILEAFLLKSYP------AELSLTALMCFVSSVEGTILALAIE  237 (333)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~  237 (333)
                                   .+. +....|+++++.++++|+++++..|+..++.+      ++.+...+....+.++++|.....|
T Consensus       187 -------------~~~-~~~~~G~~~~l~s~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lp~~~~~e  252 (350)
T PTZ00343        187 -------------KEL-HFTWLAFWCAMLSNLGSSLRSIFAKKTMKNKSEIGENLTASNIYMLLTLIASLISLPLVLFFE  252 (350)
T ss_pred             -------------ccc-hhHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccCCHHHHHHHHHHHHHHHHHHHHHHHh
Confidence                         122 34567999999999999999999999887642      2444556667888888888886554


Q ss_pred             cCC-cccee----eccchhHHHHHHHHHHHHHHHHHHHH----HHhhcCceeeeeccchhHHHHHHHHHHHhccccchhh
Q 043160          238 RGN-TGIWL----LHFDAKLLSVLYGGFVSCTAYFIMGW----LMKRKGPVFVSSFNPLSMVIIAILGSFFIAEELFLGR  308 (333)
Q Consensus       238 ~~~-~~~~~----~~~~~~~~~l~~~~~~~~~~~~~~~~----a~~~~~~~~~~~~~~~~pv~~~~~~~~~~~e~~~~~~  308 (333)
                      ... ...+.    ......+..+.+..+.+++++++++.    ++++.++...++..+++|+++++++++++||++++.+
T Consensus       253 ~~~~~~~~~~~~~~~~~~~~~~~l~~i~~s~l~~~l~n~~~f~~l~~~s~~t~sv~~~lk~V~~iv~s~l~~ge~lt~~~  332 (350)
T PTZ00343        253 GKKWVPVWTNYTANMTNYTKGIIIFKIFFSGVWYYLYNEVAFYCLGKVNQVTHAVANTLKRVVIIVSSIIIFQTQVTLLG  332 (350)
T ss_pred             hHHHHHHHHHhhhcccccchHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHhhhhHHHhCCCCchHh
Confidence            311 11110    00111223344433338888888885    9999999999999999999999999999999999999


Q ss_pred             hHHHHHHHhhhhhheec
Q 043160          309 IVGAIVIVIGLYMVLWG  325 (333)
Q Consensus       309 ~~G~~li~~g~~~~~~~  325 (333)
                      ++|+++++.|++++..-
T Consensus       333 ~iG~~lii~Gv~lYs~~  349 (350)
T PTZ00343        333 YLGMAVAILGALLYSLF  349 (350)
T ss_pred             HHHHHHHHHHHHHHhhc
Confidence            99999999999998754

>TIGR00688 rarD rarD protein

Probab=99.95  E-value=2.1e-26  Score=201.31  Aligned_cols=248  Identities=12%  Similarity=0.127  Sum_probs=183.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHhhcC-----CCCCCHH-HHHHHHHHHHH
Q 043160            9 KPYLGVIFMQFCSSIMSIITKIALTQGMSQHVLVAYRMVVATSLIAPFAIVLERKT-----RPKMTFR-IFAKIALLGLF   82 (333)
Q Consensus         9 ~~~l~~~~~~~~~~~~~~~~k~~l~~~~~~~~~~~~r~~~~~~~l~~~~~~~~~~~-----~~~~~~~-~~~~~~~~g~~   82 (333)
                      +|.+++++++++||.++++.|..  ++++|.+.+++|++++.+++.++...+++++     .++.+++ .+..+...|.+
T Consensus         2 ~g~~~~i~a~~~wg~~~~~~k~~--~~~~~~~i~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~   79 (256)
T TIGR00688         2 KGIIVSLLASFLFGYMYYYSKLL--KPLPATDILGHRMIWSFPFMLLSVTLFRQWAALIERLKRIQKRPLILSLLLCGLL   79 (256)
T ss_pred             CcHHHHHHHHHHHHHHHHHHHHh--ccCCHHHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHhCcccchHHHHHHHHHHH
Confidence            58899999999999999999985  4599999999999999988877654433211     1111222 24456677777


Q ss_pred             HHHHHHHHHHHHhcccchhhHHHhhchHHHHHHHHHHHHhccccceecccchhhHHHHHHHHHHHHHHHHhcCCcccCCc
Q 043160           83 EPVIGQNLYFTGLKCSTATFTVAMCNILPALTFLMAWIFRLEKVKIKSMRSQAKILGTIVTAGGAMCMTLLKGPILEFPW  162 (333)
Q Consensus        83 ~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~ll~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~  162 (333)
                      . ..++.++++|++++++++++++.++.|+++++++++++|||+++++      +++++++++|+.++...+        
T Consensus        80 ~-~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~~------~l~~~~~~~Gv~li~~~~--------  144 (256)
T TIGR00688        80 I-GFNWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVFLKERISRFQ------FIAVIIATLGVISNIVLK--------  144 (256)
T ss_pred             H-HHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHH------HHHHHHHHHHHHHHHHHc--------
Confidence            5 8999999999999999999999999999999999999999999997      999999999999876210        


Q ss_pred             hhhhhhcccCCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCchHHHHHHHHHHHHHHHHHHHhhccCCcc
Q 043160          163 KQVRILHNQSETGTHNKEEHITKGALMIAAGCFSWSCFIILEAFLLKSYPAELSLTALMCFVSSVEGTILALAIERGNTG  242 (333)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (333)
                                     ++ ..     .+++.++++|+.|.+..|+..++  +........ ........+.....+.  ..
T Consensus       145 ---------------~~-~~-----~~~l~aa~~~a~~~i~~~~~~~~--~~~~~~~~~-~~~~~~~~~~~~~~~~--~~  198 (256)
T TIGR00688       145 ---------------GS-LP-----WEALVLAFSFTAYGLIRKALKNT--DLAGFCLET-LSLMPVAIYYLLQTDF--AT  198 (256)
T ss_pred             ---------------CC-ch-----HHHHHHHHHHHHHHHHHhhcCCC--CcchHHHHH-HHHHHHHHHHHHHhcc--Cc
Confidence                           11 11     35788999999999999886442  222211111 1111122111111111  11


Q ss_pred             ceeeccchhHHHHHHHHHHHHHHHHHHHHHHhhcCceeeeeccchhHHHHHHHHHHH
Q 043160          243 IWLLHFDAKLLSVLYGGFVSCTAYFIMGWLMKRKGPVFVSSFNPLSMVIIAILGSFF  299 (333)
Q Consensus       243 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~pv~~~~~~~~~  299 (333)
                      ....++...|..+.+.|+++.++|.++++++++.++++++++.+++|+++.+++.+.
T Consensus       199 ~~~~~~~~~~~~l~~~g~~t~i~~~l~~~a~~~~~a~~~s~~~yl~Pv~~~~~~~~~  255 (256)
T TIGR00688       199 VQQTNPFPIWLLLVLAGLITGTPLLAFVIAANRLPLNLLGLLQYIGPTIMMLCVSFL  255 (256)
T ss_pred             ccccCchhHHHHHHHHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHh
Confidence            111122246777888887788999999999999999999999999999999999764

This uncharacterized protein is predicted to have many membrane-spanning domains.

>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function

Probab=99.95  E-value=1.7e-25  Score=198.40  Aligned_cols=297  Identities=14%  Similarity=0.152  Sum_probs=229.0

Q ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHHhcCCC-HHHHHHHHHHHHHHHHHHHHHHHhhc-CCCCCCHHHHHHHHHHHHHHHH
Q 043160            8 AKPYLGVIFMQFCSSIMSIITKIALTQGMS-QHVLVAYRMVVATSLIAPFAIVLERK-TRPKMTFRIFAKIALLGLFEPV   85 (333)
Q Consensus         8 ~~~~l~~~~~~~~~~~~~~~~k~~l~~~~~-~~~~~~~r~~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~   85 (333)
                      .+..++.=..+++-+.+...+...-+++.+ |....+..+..-.++..+...+++++ ++.+..++++++.++.+++. .
T Consensus        12 ~~~~~lgQ~lsl~~~~t~~~s~~l~~~~~~~P~~Qs~~~Y~~l~~vy~~~~~~r~~~~~~~~~~~~~~w~y~lla~~D-v   90 (334)
T PF06027_consen   12 WIVLLLGQVLSLCITGTGTFSSLLANKGVNIPTFQSFFNYVLLALVYTPILLYRRGFKKWLKVLKRPWWKYFLLALLD-V   90 (334)
T ss_pred             HHHHHHHHHHHHHHHhHHHHHHHHHhcCccCcHHHHHHHHHHHHHHHhhhhhhccccccchhhcchhHHHHHHHHHHH-H
Confidence            345555555566777777777777445555 77777777777666666665554432 22333456678888899998 9


Q ss_pred             HHHHHHHHHhcccchhhHHHhhchHHHHHHHHHHHHhccccceecccchhhHHHHHHHHHHHHHHHHhcCCcccCCchhh
Q 043160           86 IGQNLYFTGLKCSTATFTVAMCNILPALTFLMAWIFRLEKVKIKSMRSQAKILGTIVTAGGAMCMTLLKGPILEFPWKQV  165 (333)
Q Consensus        86 ~~~~~~~~al~~~~~~~~~~l~~~~pi~~~ll~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~  165 (333)
                      .++++.+.|++||+.+.++++.++..+++.+++++++|||.++.+      ++|+++++.|+.++...+...        
T Consensus        91 ~aN~~~v~a~~yTsvtS~~lL~~~~i~~~~~LS~~fL~~ry~~~~------~~gv~i~i~Gv~lv~~sD~~~--------  156 (334)
T PF06027_consen   91 EANYLVVLAYQYTSVTSVQLLDCTSIPFVMILSFIFLKRRYSWFH------ILGVLICIAGVVLVVVSDVLS--------  156 (334)
T ss_pred             HHHHHHHHHhhcccHhHHHhhhhhhhHHHHHHHHHHHHhhhhHHH------HHHHHHHHhhhhheeeecccc--------
Confidence            999999999999999999999999999999999999999999997      999999999999987543210        


Q ss_pred             hhhcccCCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCchHHHHHHHHHHHHHHHHHHHhhccCCcccee
Q 043160          166 RILHNQSETGTHNKEEHITKGALMIAAGCFSWSCFIILEAFLLKSYPAELSLTALMCFVSSVEGTILALAIERGNTGIWL  245 (333)
Q Consensus       166 ~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  245 (333)
                             .+++.+. ++...|+++++.|+++||++++.+++..|+. +......+.-+++.++..+...+.|..+....+
T Consensus       157 -------~~~~~~~-~~~i~GDll~l~~a~lya~~nV~~E~~v~~~-~~~~~lg~~Glfg~ii~~iq~~ile~~~i~~~~  227 (334)
T PF06027_consen  157 -------GSDSSSG-SNPILGDLLALLGAILYAVSNVLEEKLVKKA-PRVEFLGMLGLFGFIISGIQLAILERSGIESIH  227 (334)
T ss_pred             -------cccCCCC-CccchhHHHHHHHHHHHHHHHHHHHHhcccC-CHHHHHHHHHHHHHHHHHHHHHheehhhhhccC
Confidence                   0011244 5678999999999999999999999999987 456677777888888888888777763444433


Q ss_pred             eccchhHHHHHHHHHHHHHHHHHHHHHHhhcCceeeeeccchhHHHHHHHHHHHhccccchhhhHHHHHHHhhhhhheec
Q 043160          246 LHFDAKLLSVLYGGFVSCTAYFIMGWLMKRKGPVFVSSFNPLSMVIIAILGSFFIAEELFLGRIVGAIVIVIGLYMVLWG  325 (333)
Q Consensus       246 ~~~~~~~~~l~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~~~~~~~  325 (333)
                      .++ .....++.-+++.+.-|.+....++..+|+..++-..+..+++++++++++|+++++..++|.++|+.|.+++...
T Consensus       228 w~~-~~~~~~v~~~~~lf~~y~l~p~~l~~ssAt~~nLsLLTsd~~ali~~i~~f~~~~~~ly~~af~lIiiG~vvy~~~  306 (334)
T PF06027_consen  228 WTS-QVIGLLVGYALCLFLFYSLVPIVLRMSSATFFNLSLLTSDFYALIIDIFFFGYKFSWLYILAFALIIIGFVVYNLA  306 (334)
T ss_pred             CCh-hhHHHHHHHHHHHHHHHHHHHHHHHhCccceeehHHHHhhHHHHHHHHHhcCccccHHHHHHHHHHHHHhheEEcc
Confidence            332 2222222223336667778888999999999999999999999999999999999999999999999999999865


Q ss_pred             CCCC
Q 043160          326 RSKD  329 (333)
Q Consensus       326 ~~~~  329 (333)
                      ++++
T Consensus       307 ~~~~  310 (334)
T PF06027_consen  307 ESPE  310 (334)
T ss_pred             CCcc
Confidence            5443

Some of the sequences in this family are annotated as putative membrane proteins.

>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]

Probab=99.94  E-value=5.1e-24  Score=189.52  Aligned_cols=283  Identities=21%  Similarity=0.307  Sum_probs=216.1

Q ss_pred             cccccHHHHHHHHHHHHHHHHHHHHHHHHhcC-CCHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHH
Q 043160            4 QYHHAKPYLGVIFMQFCSSIMSIITKIALTQG-MSQHVLVAYRMVVATSLIAPFAIVLERKTRPKMTFRIFAKIALLGLF   82 (333)
Q Consensus         4 ~~~~~~~~l~~~~~~~~~~~~~~~~k~~l~~~-~~~~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~   82 (333)
                      +++...+..+.++.++.|+......|... ++ .++....+.|...+.+...+... +++....+ ..+.+++..+.+.+
T Consensus         2 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~   78 (292)
T COG0697           2 KRALLLGLLALLLWGLLWGLSFIALKLAV-ESLDPFLFAAALRFLIAALLLLPLLL-LEPRGLRP-ALRPWLLLLLLALL   78 (292)
T ss_pred             CchHHHHHHHHHHHHHHHHHHHHHHHHHh-cccCChHHHHHHHHHHHHHHHHHHHH-hhcccccc-cccchHHHHHHHHH
Confidence            45566788889999999999999999994 54 67777777799988888443321 11111111 11224556666777


Q ss_pred             HHHHHHHHHHHHhcccchhhHHHhhchHHHHHHHHHH-HHhccccceecccchhhHHHHHHHHHHHHHHHHhcCCcccCC
Q 043160           83 EPVIGQNLYFTGLKCSTATFTVAMCNILPALTFLMAW-IFRLEKVKIKSMRSQAKILGTIVTAGGAMCMTLLKGPILEFP  161 (333)
Q Consensus        83 ~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~ll~~-~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~  161 (333)
                      ....++.+++.++++++++.++++.++.|+++.+++. +++|||+++++      +.++++.+.|+.++..   ++..  
T Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~e~~~~~~------~~~~~~~~~Gv~lv~~---~~~~--  147 (292)
T COG0697          79 GLALPFLLLFLALKYTSASVASLIIGLLPLFTALLAVLLLLGERLSLLQ------ILGILLALAGVLLILL---GGGG--  147 (292)
T ss_pred             HHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHccCCCcHHH------HHHHHHHHHhHHheec---CCCc--
Confidence            7699999999999999999999999999999999997 77799999997      9999999999999872   1100  


Q ss_pred             chhhhhhcccCCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCchHHHH-HHHHHHHHHHHHHHHhhccCC
Q 043160          162 WKQVRILHNQSETGTHNKEEHITKGALMIAAGCFSWSCFIILEAFLLKSYPAELSLTA-LMCFVSSVEGTILALAIERGN  240 (333)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~  240 (333)
                                     ... . ...|+.+++.++++|+++.+..|+.. +. ++..... +..........+..  ...  
T Consensus       148 ---------------~~~-~-~~~g~~~~l~a~~~~a~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~--~~~--  204 (292)
T COG0697         148 ---------------GGI-L-SLLGLLLALAAALLWALYTALVKRLS-RL-GPVTLALLLQLLLALLLLLLFF--LSG--  204 (292)
T ss_pred             ---------------chh-H-HHHHHHHHHHHHHHHHHHHHHHHHhc-CC-ChHHHHHHHHHHHHHHHHHHHH--hcc--
Confidence                           011 1 46899999999999999999999877 33 3344444 33331112222222  111  


Q ss_pred             ccceeeccchhHHHHHHHHHH-HHHHHHHHHHHHhhcCceeeeeccchhHHHHHHHHHHHhccccchhhhHHHHHHHhhh
Q 043160          241 TGIWLLHFDAKLLSVLYGGFV-SCTAYFIMGWLMKRKGPVFVSSFNPLSMVIIAILGSFFIAEELFLGRIVGAIVIVIGL  319 (333)
Q Consensus       241 ~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~a~~~~~~~~~~~~~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~  319 (333)
                      ..  .......+..+.+.|++ +.+++.++++++++.+++..+.+.+++|+++.+++++++||+++..+++|+++++.|+
T Consensus       205 ~~--~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~l~~~e~~~~~~~~G~~li~~g~  282 (292)
T COG0697         205 FG--APILSRAWLLLLYLGVFSTGLAYLLWYYALRLLGASLVALLSLLEPVFAALLGVLLLGEPLSPAQLLGAALVVLGV  282 (292)
T ss_pred             cc--ccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHH
Confidence            11  11223567888888999 7789999999999999999999999999999999999999999999999999999999


Q ss_pred             hhheec
Q 043160          320 YMVLWG  325 (333)
Q Consensus       320 ~~~~~~  325 (333)
                      .+...+
T Consensus       283 ~l~~~~  288 (292)
T COG0697         283 LLASLR  288 (292)
T ss_pred             HHHhcc
Confidence            998877

>COG2962 RarD Predicted permeases [General function prediction only]

Probab=99.94  E-value=1.7e-24  Score=182.78  Aligned_cols=281  Identities=14%  Similarity=0.144  Sum_probs=228.4

Q ss_pred             cccccHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHhhcCC--C-CCCHHHHHHHHHHH
Q 043160            4 QYHHAKPYLGVIFMQFCSSIMSIITKIALTQGMSQHVLVAYRMVVATSLIAPFAIVLERKTR--P-KMTFRIFAKIALLG   80 (333)
Q Consensus         4 ~~~~~~~~l~~~~~~~~~~~~~~~~k~~l~~~~~~~~~~~~r~~~~~~~l~~~~~~~~~~~~--~-~~~~~~~~~~~~~g   80 (333)
                      +++..+|++..+.+.++||..+...|..  ++.++.++...|...+.+++..+....++++.  . ..+++.+....+.+
T Consensus         2 ~~~~~~Gil~~l~Ay~lwG~lp~y~kll--~~~~~~eIlahRviwS~~~~l~ll~~~r~~~~~~~~~~~p~~~~~~~l~a   79 (293)
T COG2962           2 AKDSRKGILLALLAYLLWGLLPLYFKLL--EPLPATEILAHRVIWSFPFMLALLFLLRQWRELKQLLKQPKTLLMLALTA   79 (293)
T ss_pred             CCcccchhHHHHHHHHHHHHHHHHHHHH--ccCCHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhCcHHHHHHHHHH
Confidence            3566799999999999999999999999  67999999999999999999887766544321  1 12345566667777


Q ss_pred             HHHHHHHHHHHHHHhcccchhhHHHhhchHHHHHHHHHHHHhccccceecccchhhHHHHHHHHHHHHHHHHhcCCcccC
Q 043160           81 LFEPVIGQNLYFTGLKCSTATFTVAMCNILPALTFLMAWIFRLEKVKIKSMRSQAKILGTIVTAGGAMCMTLLKGPILEF  160 (333)
Q Consensus        81 ~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~ll~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~  160 (333)
                      .+. ..++..|.+|.++..+-++++-.+..|++.++++.+++|||+|+.|      +++++++.+||...+...|.    
T Consensus        80 ~li-~~nW~lfiWAvn~g~~leaSLGY~InPL~~VllG~lflkErls~~Q------~iAV~lA~~GV~~~~~~~g~----  148 (293)
T COG2962          80 LLI-GLNWWLFIWAVNNGHVLEASLGYFINPLVNVLLGRLFLKERLSRLQ------WIAVGLAAAGVLIQTWLLGS----  148 (293)
T ss_pred             HHH-HHHHHHhheecCCCchhHHHhHHHHHHHHHHHHHHHHHHhhccHHH------HHHHHHHHHHHHHHHHHcCC----
Confidence            776 9999999999999999999999999999999999999999999997      99999999999998864431    


Q ss_pred             CchhhhhhcccCCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCchHHHHHHHHHHHHHHHHHHHhhccCC
Q 043160          161 PWKQVRILHNQSETGTHNKEEHITKGALMIAAGCFSWSCFIILEAFLLKSYPAELSLTALMCFVSSVEGTILALAIERGN  240 (333)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (333)
                                       -+        ..++.-+++|+.|....|+ .+-  |+.+.....+..-........+..++ +
T Consensus       149 -----------------lp--------wval~la~sf~~Ygl~RK~-~~v--~a~~g~~lE~l~l~p~al~yl~~l~~-~  199 (293)
T COG2962         149 -----------------LP--------WVALALALSFGLYGLLRKK-LKV--DALTGLTLETLLLLPVALIYLLFLAD-S  199 (293)
T ss_pred             -----------------Cc--------HHHHHHHHHHHHHHHHHHh-cCC--chHHhHHHHHHHHhHHHHHHHHHHhc-C
Confidence                             11        3455668899999987554 332  44666666666666666666655554 2


Q ss_pred             ccceeeccchhHHHHHHHHHHHHHHHHHHHHHHhhcCceeeeeccchhHHHHHHHHHHHhccccchhhhHHHHHHHhhhh
Q 043160          241 TGIWLLHFDAKLLSVLYGGFVSCTAYFIMGWLMKRKGPVFVSSFNPLSMVIIAILGSFFIAEELFLGRIVGAIVIVIGLY  320 (333)
Q Consensus       241 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~~  320 (333)
                      ...........+..+...|.++.++..++..+.|+.+-+..+.++|++|..-.+++.+++||+++..+++..++|.+|+.
T Consensus       200 ~~~~~~~~~~~~~LLv~aG~vTavpL~lf~~aa~~lpls~~G~lqYi~Ptl~fllav~i~~E~~~~~~~~~F~~IW~aL~  279 (293)
T COG2962         200 GQFLQQNANSLWLLLVLAGLVTAVPLLLFAAAAKRLPLSTLGFLQYIEPTLMFLLAVLIFGEPFDSDQLVTFAFIWLALA  279 (293)
T ss_pred             chhhhcCCchHHHHHHHhhHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHH
Confidence            21112123456777888899999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hheecC
Q 043160          321 MVLWGR  326 (333)
Q Consensus       321 ~~~~~~  326 (333)
                      ++..+.
T Consensus       280 l~~~d~  285 (293)
T COG2962         280 LFSIDG  285 (293)
T ss_pred             HHHHHH
Confidence            887654

>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]

Probab=99.92  E-value=1.2e-22  Score=167.14  Aligned_cols=275  Identities=12%  Similarity=0.072  Sum_probs=223.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 043160           10 PYLGVIFMQFCSSIMSIITKIALTQGMSQHVLVAYRMVVATSLIAPFAIVLERKTRPKMTFRIFAKIALLGLFEPVIGQN   89 (333)
Q Consensus        10 ~~l~~~~~~~~~~~~~~~~k~~l~~~~~~~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~   89 (333)
                      +++.++.++..--....+.|..+ ..+++...+.+|..++.++++.+...  ++  .+..+++++.+...|+.. ...|.
T Consensus        13 p~~~ll~amvsiq~Gas~Ak~LF-P~vG~~g~t~lRl~~aaLIll~l~RP--wr--~r~~~~~~~~~~~yGvsL-g~MNl   86 (292)
T COG5006          13 PILALLVAMVSIQSGASFAKSLF-PLVGAAGVTALRLAIAALILLALFRP--WR--RRLSKPQRLALLAYGVSL-GGMNL   86 (292)
T ss_pred             cHHHHHHHHHHHHhhHHHHHHHc-cccChhhHHHHHHHHHHHHHHHHhhH--HH--hccChhhhHHHHHHHHHH-HHHHH
Confidence            57888888887778888889886 66999999999999999999976522  22  456678899999999998 99999


Q ss_pred             HHHHHhcccchhhHHHhhchHHHHHHHHHHHHhccccceecccchhhHHHHHHHHHHHHHHHHhcCCcccCCchhhhhhc
Q 043160           90 LYFTGLKCSTATFTVAMCNILPALTFLMAWIFRLEKVKIKSMRSQAKILGTIVTAGGAMCMTLLKGPILEFPWKQVRILH  169 (333)
Q Consensus        90 ~~~~al~~~~~~~~~~l~~~~pi~~~ll~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~~~~  169 (333)
                      +||.++++.|.+.+..+.++.|+.+++++.--      .++      .+-+.+++.|+.++.-.+               
T Consensus        87 ~FY~si~riPlGiAVAiEF~GPL~vA~~~sRr------~~d------~vwvaLAvlGi~lL~p~~---------------  139 (292)
T COG5006          87 LFYLSIERIPLGIAVAIEFTGPLAVALLSSRR------LRD------FVWVALAVLGIWLLLPLG---------------  139 (292)
T ss_pred             HHHHHHHhccchhhhhhhhccHHHHHHHhccc------hhh------HHHHHHHHHHHHhheecc---------------
Confidence            99999999999999999999999988776522      244      777788889999876111               


Q ss_pred             ccCCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCchHHHHHHHHHHHHHHHHHHHhhccCCccceeeccc
Q 043160          170 NQSETGTHNKEEHITKGALMIAAGCFSWSCFIILEAFLLKSYPAELSLTALMCFVSSVEGTILALAIERGNTGIWLLHFD  249 (333)
Q Consensus       170 ~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  249 (333)
                            ++.. +-+..|..+++.++.||+.|.+..+|..+.. +.-+....-+..+.+...|+.....+  ..-   .+.
T Consensus       140 ------~~~~-~lDp~Gv~~Al~AG~~Wa~YIv~G~r~g~~~-~g~~g~a~gm~vAaviv~Pig~~~ag--~~l---~~p  206 (292)
T COG5006         140 ------QSVW-SLDPVGVALALGAGACWALYIVLGQRAGRAE-HGTAGVAVGMLVAALIVLPIGAAQAG--PAL---FSP  206 (292)
T ss_pred             ------CCcC-cCCHHHHHHHHHHhHHHHHHHHHcchhcccC-CCchHHHHHHHHHHHHHhhhhhhhcc--hhh---cCh
Confidence                  1123 5567999999999999999999999876544 34667788888999999999974332  211   122


Q ss_pred             hhHHHHHHHHHH-HHHHHHHHHHHHhhcCceeeeeccchhHHHHHHHHHHHhccccchhhhHHHHHHHhhhhhheecCCC
Q 043160          250 AKLLSVLYGGFV-SCTAYFIMGWLMKRKGPVFVSSFNPLSMVIIAILGSFFIAEELFLGRIVGAIVIVIGLYMVLWGRSK  328 (333)
Q Consensus       250 ~~~~~l~~~~~~-~~~~~~~~~~a~~~~~~~~~~~~~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~~~~~~~~~~  328 (333)
                      +....-+..+++ +.+.|.+-..++++.+...-+.+.++||.++.+.+++++||++|+.||.|+++|+.+..-..+..||
T Consensus       207 ~ll~laLgvavlSSalPYsLEmiAL~rlp~~~F~~LlSLePa~aAl~G~i~L~e~ls~~qwlaI~~ViaAsaG~~lt~~~  286 (292)
T COG5006         207 SLLPLALGVAVLSSALPYSLEMIALRRLPARTFGTLLSLEPALAALSGLIFLGETLTLIQWLAIAAVIAASAGSTLTARK  286 (292)
T ss_pred             HHHHHHHHHHHHhcccchHHHHHHHhhCChhHHHHHHHhhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhccccccCC
Confidence            344555567888 9999999999999999999999999999999999999999999999999999999988876665554


Q ss_pred             CC
Q 043160          329 DQ  330 (333)
Q Consensus       329 ~~  330 (333)
                      +.
T Consensus       287 ~~  288 (292)
T COG5006         287 PA  288 (292)
T ss_pred             CC
Confidence            43

>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]

Probab=99.91  E-value=5.7e-26  Score=187.84  Aligned_cols=293  Identities=17%  Similarity=0.146  Sum_probs=222.4

Q ss_pred             cccHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHHHH
Q 043160            6 HHAKPYLGVIFMQFCSSIMSIITKIALTQGMSQHVLVAYRMVVATSLIAPFAIVLERKTRPKMTFRIFAKIALLGLFEPV   85 (333)
Q Consensus         6 ~~~~~~l~~~~~~~~~~~~~~~~k~~l~~~~~~~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~   85 (333)
                      +..+|.++..++.+.-..+.+..|..   +.+|.+....|+++-+++..|..+++....+  -+.....+++++|..+ .
T Consensus        35 ~p~~gl~l~~vs~ff~~~~vv~t~~~---e~~p~e~a~~r~l~~mlit~pcliy~~~~v~--gp~g~R~~LiLRg~mG-~  108 (346)
T KOG4510|consen   35 KPNLGLLLLTVSYFFNSCMVVSTKVL---ENDPMELASFRLLVRMLITYPCLIYYMQPVI--GPEGKRKWLILRGFMG-F  108 (346)
T ss_pred             CCccCceehhhHHHHhhHHHhhhhhh---ccChhHhhhhhhhhehhhhheEEEEEeeeee--cCCCcEEEEEeehhhh-h
Confidence            45677888888866666666666644   3889999999988888887776655444331  1223456788999999 8


Q ss_pred             HHHHHHHHHhcccchhhHHHhhchHHHHHHHHHHHHhccccceecccchhhHHHHHHHHHHHHHHHHhcCCcccCCchhh
Q 043160           86 IGQNLYFTGLKCSTATFTVAMCNILPALTFLMAWIFRLEKVKIKSMRSQAKILGTIVTAGGAMCMTLLKGPILEFPWKQV  165 (333)
Q Consensus        86 ~~~~~~~~al~~~~~~~~~~l~~~~pi~~~ll~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~  165 (333)
                      .+..+.|||++|.+.+.++++.+.+|.+|.+++|+++|||.+..+      .++..+.+.||++++   .|.-.++.+ +
T Consensus       109 tgvmlmyya~~~mslaDA~vItFssPvft~ifaw~~LkE~~t~~e------aL~s~itl~GVVLIv---RPpFlFG~~-t  178 (346)
T KOG4510|consen  109 TGVMLMYYALMYMSLADAVVITFSSPVFTIIFAWAFLKEPFTKFE------ALGSLITLLGVVLIV---RPPFLFGDT-T  178 (346)
T ss_pred             hHHHHHHHHHhhcchhheEEEEecChHHHHHHHHHHHcCCCcHHH------HHHHHHhhheEEEEe---cCCcccCCC-c
Confidence            899999999999999999999999999999999999999999998      999999999999998   565443322 1


Q ss_pred             hhhcccCCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCchHHHHHHHHHHHHHHHHHHHhhccCCcccee
Q 043160          166 RILHNQSETGTHNKEEHITKGALMIAAGCFSWSCFIILEAFLLKSYPAELSLTALMCFVSSVEGTILALAIERGNTGIWL  245 (333)
Q Consensus       166 ~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  245 (333)
                      +.++     + +.. +....|...++.+++.-|...++.|+.-|+.+.-+....+. ..+.+.........     ..+.
T Consensus       179 ~g~~-----~-s~~-~~~~~gt~aai~s~lf~asvyIilR~iGk~~h~~msvsyf~-~i~lV~s~I~~~~i-----g~~~  245 (346)
T KOG4510|consen  179 EGED-----S-SQV-EYDIPGTVAAISSVLFGASVYIILRYIGKNAHAIMSVSYFS-LITLVVSLIGCASI-----GAVQ  245 (346)
T ss_pred             cccc-----c-ccc-cccCCchHHHHHhHhhhhhHHHHHHHhhccccEEEEehHHH-HHHHHHHHHHHhhc-----ccee
Confidence            1111     1 112 34456778888888888888888888778775434333333 33434333333221     1333


Q ss_pred             ecc-chhHHHHHHHHHHHHHHHHHHHHHHhhcCceeeeeccchhHHHHHHHHHHHhccccchhhhHHHHHHHhhhhhhee
Q 043160          246 LHF-DAKLLSVLYGGFVSCTAYFIMGWLMKRKGPVFVSSFNPLSMVIIAILGSFFIAEELFLGRIVGAIVIVIGLYMVLW  324 (333)
Q Consensus       246 ~~~-~~~~~~l~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~~~~~~  324 (333)
                      +|. ..+|+.++.+|+++++++.+...++|+..+..++++.+...+++.+++.++|||.||++.+.|+++++.+.++...
T Consensus       246 lP~cgkdr~l~~~lGvfgfigQIllTm~lQiErAGpvaim~~~dvvfAf~wqv~ff~~~Pt~ws~~Ga~~vvsS~v~~a~  325 (346)
T KOG4510|consen  246 LPHCGKDRWLFVNLGVFGFIGQILLTMGLQIERAGPVAIMTYTDVVFAFFWQVLFFGHWPTIWSWVGAVMVVSSTVWVAL  325 (346)
T ss_pred             cCccccceEEEEEehhhhhHHHHHHHHHhhhhccCCeehhhHHHHHHHHHHHHHHhcCCChHHHhhceeeeehhHHHHHH
Confidence            332 3567777888999999999999999999999999999999999999999999999999999999999999877765


Q ss_pred             cCC
Q 043160          325 GRS  327 (333)
Q Consensus       325 ~~~  327 (333)
                      .|.
T Consensus       326 ~kw  328 (346)
T KOG4510|consen  326 KKW  328 (346)
T ss_pred             HHH
Confidence            543

>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein

Probab=99.89  E-value=5e-21  Score=169.70  Aligned_cols=279  Identities=15%  Similarity=0.151  Sum_probs=204.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 043160           10 PYLGVIFMQFCSSIMSIITKIALTQGMSQHVLVAYRMVVATSLIAPFAIVLERKTRPKMTFRIFAKIALLGLFEPVIGQN   89 (333)
Q Consensus        10 ~~l~~~~~~~~~~~~~~~~k~~l~~~~~~~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~   89 (333)
                      +++++++++++||...+..|.. . +.++.+..  |..++.+++..+....+..  ++..++.+..-++.|... ..++.
T Consensus         2 ~~l~~lia~~~wGs~g~~~k~~-~-g~~~~~~~--~~~~g~l~~~~~~~~~~~~--~~~~~~~~~~g~l~G~~w-~ig~~   74 (290)
T TIGR00776         2 DILIALIPALFWGSFVLINVKI-G-GGPYSQTL--GTTFGALILSIAIAIFVLP--EFWALSIFLVGLLSGAFW-ALGQI   74 (290)
T ss_pred             chHHHHHHHHHHhhhHHHHhcc-C-CCHHHHHH--HHHHHHHHHHHHHHHHhCC--cccccHHHHHHHHHHHHH-Hhhhh
Confidence            5788999999999999999998 4 78887775  6777777666554443321  122244455566666665 99999


Q ss_pred             HHHHHhcccchhhHHHhhc-hHHHHHHHHHHHHhccccceecccchhhHHHHHHHHHHHHHHHHhcCCcccCCchhhhhh
Q 043160           90 LYFTGLKCSTATFTVAMCN-ILPALTFLMAWIFRLEKVKIKSMRSQAKILGTIVTAGGAMCMTLLKGPILEFPWKQVRIL  168 (333)
Q Consensus        90 ~~~~al~~~~~~~~~~l~~-~~pi~~~ll~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~~~  168 (333)
                      +++.+.++++.+.+.++.+ +.+++..+.+.+++||+.++++  ....++|++++++|+.++...++++.          
T Consensus        75 ~~~~ai~~~gva~a~~i~~~~~~v~~~l~~~~~f~e~~t~~~--~~~~~~g~~l~l~G~~l~~~~~~~~~----------  142 (290)
T TIGR00776        75 NQFKSMRYMGVSKTMPISTGFQLVGGTLFGVIVFGEWSTSIQ--TLLGLLALILIIIGVYLTSRSKDKSA----------  142 (290)
T ss_pred             hHHHHHHHHhHHHHhHHHHHHHHHHHHHHHHHHhhhccchHH--HHHHHHHHHHHHHhHheEEecccccc----------
Confidence            9999999999999999987 8999999999999999998762  11127889999999888752111000          


Q ss_pred             cccCCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCchHHHHHHHH---HHHHHHHHHHHhhccCCcccee
Q 043160          169 HNQSETGTHNKEEHITKGALMIAAGCFSWSCFIILEAFLLKSYPAELSLTALMCF---VSSVEGTILALAIERGNTGIWL  245 (333)
Q Consensus       169 ~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~  245 (333)
                            ++.+. .+...|..+++.++++|+.|.+..|+.  ++ +|.+..+.+..   .++....+...   + . .++ 
T Consensus       143 ------~~~~~-~~~~~Gi~~~l~sg~~y~~~~~~~~~~--~~-~~~~~~~~~~~g~~~~~~~~~~~~~---~-~-~~~-  206 (290)
T TIGR00776       143 ------GIKSE-FNFKKGILLLLMSTIGYLVYVVVAKAF--GV-DGLSVLLPQAIGMVIGGIIFNLGHI---L-A-KPL-  206 (290)
T ss_pred             ------ccccc-cchhhHHHHHHHHHHHHHHHHHHHHHc--CC-CcceehhHHHHHHHHHHHHHHHHHh---c-c-cch-
Confidence                  00011 223579999999999999999998875  23 56666444333   33332222221   1 1 111 


Q ss_pred             eccchhHHHHHHHHHHHHHHHHHHHHHHh-hcCceeeeeccchhHHHHHHHHHHHhccccchhhh----HHHHHHHhhhh
Q 043160          246 LHFDAKLLSVLYGGFVSCTAYFIMGWLMK-RKGPVFVSSFNPLSMVIIAILGSFFIAEELFLGRI----VGAIVIVIGLY  320 (333)
Q Consensus       246 ~~~~~~~~~l~~~~~~~~~~~~~~~~a~~-~~~~~~~~~~~~~~pv~~~~~~~~~~~e~~~~~~~----~G~~li~~g~~  320 (333)
                       .....+..++ .|++..+++.+|..+.+ +.+++..+.+.+.+|+.+.+++++++||+.++.++    +|+++++.|+.
T Consensus       207 -~~~~~~~~~~-~Gi~~~ia~~~y~~~~~~~~~~~~~~~ls~~~pvia~~~~v~~l~E~~~~~~~~~~~iG~~lIi~~~~  284 (290)
T TIGR00776       207 -KKYAILLNIL-PGLMWGIGNFFYLFSAQPKVGVATSFSLSQLGVIISTLGGILILGEKKTKREMIAISVGIILIIIAAN  284 (290)
T ss_pred             -HHHHHHHHHH-HHHHHHHHHHHHHHHcccccchhhHHHHHHHHHHHHHHHHHHHhccCCCcceeehhHHHHHHHHHHHH
Confidence             2223344444 78889999999999999 99999999999999999999999999999999999    99999999988


Q ss_pred             hheec
Q 043160          321 MVLWG  325 (333)
Q Consensus       321 ~~~~~  325 (333)
                      +....
T Consensus       285 l~~~~  289 (290)
T TIGR00776       285 ILGIG  289 (290)
T ss_pred             HHhcc
Confidence            87543

These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.

>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []

Probab=99.86  E-value=2e-19  Score=160.82  Aligned_cols=269  Identities=13%  Similarity=0.140  Sum_probs=212.1

Q ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhhHHHhhchHHHHHHH
Q 043160           37 SQHVLVAYRMVVATSLIAPFAIVLERKTRPKMTFRIFAKIALLGLFEPVIGQNLYFTGLKCSTATFTVAMCNILPALTFL  116 (333)
Q Consensus        37 ~~~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~l  116 (333)
                      .|..+++.++....+...+.....+   .++.++..++.....+.+. .++..+.+.|+++.|.+...++.+..|+.+++
T Consensus        31 ~~~~lt~~q~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~-~~~~~~~~~al~~i~~p~~~~~ks~~~i~vmi  106 (303)
T PF08449_consen   31 FPLFLTFVQFAFNALFSFILLSLFK---FPKSRKIPLKKYAILSFLF-FLASVLSNAALKYISYPTQIVFKSSKPIPVMI  106 (303)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHhcc---ccCCCcChHHHHHHHHHHH-HHHHHHHHHHHHhCChHHHHHHhhhHHHHHHH
Confidence            3888889999888877776554333   1233445566778888888 88999999999999999999999999999999


Q ss_pred             HHHHHhccccceecccchhhHHHHHHHHHHHHHHHHhcCCcccCCchhhhhhcccCCCCCCCcchhhHHHHHHHHHHHHH
Q 043160          117 MAWIFRLEKVKIKSMRSQAKILGTIVTAGGAMCMTLLKGPILEFPWKQVRILHNQSETGTHNKEEHITKGALMIAAGCFS  196 (333)
Q Consensus       117 l~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~  196 (333)
                      ++.+++|+|.++++      +.++++..+|+.+....+..+.              ++++... .....|+.+.+.+.++
T Consensus       107 ~~~l~~~k~y~~~~------~~~v~li~~Gv~~~~~~~~~~~--------------~~~~~~~-~~~~~G~~ll~~sl~~  165 (303)
T PF08449_consen  107 LGVLILGKRYSRRQ------YLSVLLITIGVAIFTLSDSSSS--------------SSSNSSS-FSSALGIILLLLSLLL  165 (303)
T ss_pred             HHHHhcCccccHHH------HHHHHHHHhhHheeeecccccc--------------ccccccc-ccchhHHHHHHHHHHH
Confidence            99999999999997      9999999999999875432211              1111122 2233599999999999


Q ss_pred             HHHHHHHHHHHhhhCC-CchHHHHHHHHHHHHHHHHHHHhhc-cCCccce--eeccchhHHHHHHHHHHHHHHHHHHHHH
Q 043160          197 WSCFIILEAFLLKSYP-AELSLTALMCFVSSVEGTILALAIE-RGNTGIW--LLHFDAKLLSVLYGGFVSCTAYFIMGWL  272 (333)
Q Consensus       197 ~a~~~v~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~--~~~~~~~~~~l~~~~~~~~~~~~~~~~a  272 (333)
                      .|...+.+++..++++ ++....++....+.+...+.....+ +......  ....+..+..++...+.+.++..+.++.
T Consensus       166 ~a~~~~~qe~~~~~~~~~~~~~mfy~n~~~~~~~~~~~~~l~~~~~~~~~~f~~~~p~~~~~l~~~s~~~~~g~~~i~~~  245 (303)
T PF08449_consen  166 DAFTGVYQEKLFKKYGKSPWELMFYTNLFSLPFLLILLFLLPTGEFRSAIRFISAHPSVLLYLLLFSLTGALGQFFIFYL  245 (303)
T ss_pred             HHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhHhhHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999998876 4678889999998888777776521 1011111  1122234555556566688888999999


Q ss_pred             HhhcCceeeeeccchhHHHHHHHHHHHhccccchhhhHHHHHHHhhhhhheecCCCCC
Q 043160          273 MKRKGPVFVSSFNPLSMVIIAILGSFFIAEELFLGRIVGAIVIVIGLYMVLWGRSKDQ  330 (333)
Q Consensus       273 ~~~~~~~~~~~~~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~~~~~~~~~~~~  330 (333)
                      .++.++...++...++.+++++++++++|+++++.+++|.++++.|..+....++|++
T Consensus       246 ~~~~~al~~t~v~t~Rk~~sillS~~~f~~~~~~~~~~G~~lv~~g~~~~~~~~~k~~  303 (303)
T PF08449_consen  246 IKKFSALTTTIVTTLRKFLSILLSVIIFGHPLSPLQWIGIVLVFAGIFLYSYAKKKKN  303 (303)
T ss_pred             HHhcCchhhhhHHHHHHHHHHHHHHHhcCCcCChHHHHHHHHhHHHHHHHHHhhccCC
Confidence            9999999999999999999999999999999999999999999999999998876653

; GO: 0055085 transmembrane transport

>KOG2765 consensus Predicted membrane protein [Function unknown]

Probab=99.85  E-value=2.9e-20  Score=161.36  Aligned_cols=232  Identities=11%  Similarity=0.137  Sum_probs=191.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcccchhhHHHhhchHHHHHHHHHHHHhccccceecccchhhHHHHHHHHHHHHHHHH
Q 043160           73 FAKIALLGLFEPVIGQNLYFTGLKCSTATFTVAMCNILPALTFLMAWIFRLEKVKIKSMRSQAKILGTIVTAGGAMCMTL  152 (333)
Q Consensus        73 ~~~~~~~g~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~ll~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~  152 (333)
                      .+..+....+. .++++.+..|+++++++...++.+++.+||..++.++.+||+|..+      ++++.+++.|+++++.
T Consensus       159 ak~sl~fc~lW-F~anl~~naALa~TsVAS~TilSStSs~FtL~la~if~~e~ft~sK------llav~~si~GViiVt~  231 (416)
T KOG2765|consen  159 AKLSLFFCPLW-FLANLTSNAALAFTSVASTTILSSTSSFFTLFLAAIFPVERFTLSK------LLAVFVSIAGVIIVTM  231 (416)
T ss_pred             HHHHHHHHHHH-HHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHcCcchhhHHH------HHHHHHhhccEEEEEe
Confidence            34455666666 8899999999999999999999999999999999999999999996      9999999999999985


Q ss_pred             hcCCcccCCchhhhhhcccCCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCchH---HHHHHHHHHHHHH
Q 043160          153 LKGPILEFPWKQVRILHNQSETGTHNKEEHITKGALMIAAGCFSWSCFIILEAFLLKSYPAELS---LTALMCFVSSVEG  229 (333)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~---~~~~~~~~~~~~~  229 (333)
                      ++...                +++... ++...|+++++++|+.||+|.++.|+...++++.+.   ...+.-++..+.+
T Consensus       232 ~~s~~----------------~~~~~a-~~~llG~llaL~sA~~YavY~vllk~~~~~eg~rvdi~lffGfvGLfnllll  294 (416)
T KOG2765|consen  232 GDSKQ----------------NSDLPA-SRPLLGNLLALLSALLYAVYTVLLKRKIGDEGERVDIQLFFGFVGLFNLLLL  294 (416)
T ss_pred             ccccc----------------cccCCc-cchhHHHHHHHHHHHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHHH
Confidence            43211                112345 667899999999999999999999988777642222   2223344455667


Q ss_pred             HHHHHhhccCCccceeeccchhHHHHHHHHHH-HHHHHHHHHHHHhhcCceeeeeccchhHHHHHHHHHHHhccccchhh
Q 043160          230 TILALAIERGNTGIWLLHFDAKLLSVLYGGFV-SCTAYFIMGWLMKRKGPVFVSSFNPLSMVIIAILGSFFIAEELFLGR  308 (333)
Q Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~a~~~~~~~~~~~~~~~~pv~~~~~~~~~~~e~~~~~~  308 (333)
                      .|..++........++.|+..+...+++.+++ ++++-++|.+|.-..++..+++-..++.+.+++.+.++-|.++++.+
T Consensus       295 wP~l~iL~~~~~e~F~lP~~~q~~~vv~~~ligtvvSDylW~~a~~lTs~Lv~TlgmSltIPLA~~aD~l~k~~~~S~~~  374 (416)
T KOG2765|consen  295 WPPLIILDFFGEERFELPSSTQFSLVVFNNLIGTVVSDYLWAKAVLLTSPLVVTLGMSLTIPLAMFADVLIKGKHPSALY  374 (416)
T ss_pred             hHHHHHHHHhccCcccCCCCceeEeeeHhhHHHHHHHHHHHHHHHHhccchhheeeeeEeeeHHHHHHHHHcCCCCCHHH
Confidence            76666665444556677777778888888988 99999999999999999999999999999999999999999999999


Q ss_pred             hHHHHHHHhhhhhheecCCC
Q 043160          309 IVGAIVIVIGLYMVLWGRSK  328 (333)
Q Consensus       309 ~~G~~li~~g~~~~~~~~~~  328 (333)
                      ++|...|++|-+.++...+.
T Consensus       375 iiGsi~Ifv~Fv~vn~~~~~  394 (416)
T KOG2765|consen  375 IIGSIPIFVGFVIVNISSEN  394 (416)
T ss_pred             HHHHHHHHHHHhheeccccc
Confidence            99999999998888865543

>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]

Probab=99.78  E-value=4.5e-19  Score=155.48  Aligned_cols=287  Identities=12%  Similarity=0.097  Sum_probs=227.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHh--cCCCHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHHHH
Q 043160           14 VIFMQFCSSIMSIITKIALT--QGMSQHVLVAYRMVVATSLIAPFAIVLERKTRPKMTFRIFAKIALLGLFEPVIGQNLY   91 (333)
Q Consensus        14 ~~~~~~~~~~~~~~~k~~l~--~~~~~~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~   91 (333)
                      .....++-.......|+.++  +.--|..++..+...+.+........+..+..+..++..+..++..|+.. .++..+-
T Consensus        22 ~~~w~~~~v~~~~~nK~il~~~~f~~p~~lt~~~~~~~~l~~~v~~~l~~~~~~~~~~~~~~~~llpl~~~~-~~~~v~~  100 (316)
T KOG1441|consen   22 FAIWYVLSVGVIILNKYILSKYGFPFPITLTMLHLFCGALALLVIKVLKLVPPSKISSKLPLRTLLPLGLVF-CISHVLG  100 (316)
T ss_pred             HHHHhhhheeeEEeeHhhhccCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCCccccccchHHHHHHHHHH-HHHHHhc
Confidence            33344444445667888876  44457888888777777777665544444443333556788899999999 9999999


Q ss_pred             HHHhcccchhhHHHhhchHHHHHHHHHHHHhccccceecccchhhHHHHHHHHHHHHHHHHhcCCcccCCchhhhhhccc
Q 043160           92 FTGLKCSTATFTVAMCNILPALTFLMAWIFRLEKVKIKSMRSQAKILGTIVTAGGAMCMTLLKGPILEFPWKQVRILHNQ  171 (333)
Q Consensus        92 ~~al~~~~~~~~~~l~~~~pi~~~ll~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~  171 (333)
                      +.++.+.+++.++.+..+.|++++++++++.+|+.+...      +..++....|+.+.+.                   
T Consensus       101 n~Sl~~v~VsF~q~iKa~~P~~tvl~~~~~~~~~~s~~~------~lsL~piv~GV~ias~-------------------  155 (316)
T KOG1441|consen  101 NVSLSYVPVSFYQTIKALMPPFTVLLSVLLLGKTYSSMT------YLSLLPIVFGVAIASV-------------------  155 (316)
T ss_pred             chhhhccchhHHHHHHhhcchhHHHHHHHHhCCCCcceE------EEEEEEeeeeEEEeee-------------------
Confidence            999999999999999999999999999999999999998      8999999999999763                   


Q ss_pred             CCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHhhh--CC-CchHHHHHHHHHHHHHHH-HHHHhhccCCccc--ee
Q 043160          172 SETGTHNKEEHITKGALMIAAGCFSWSCFIILEAFLLKS--YP-AELSLTALMCFVSSVEGT-ILALAIERGNTGI--WL  245 (333)
Q Consensus       172 ~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~--~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~--~~  245 (333)
                           .+. +.+..|.+.++.+.+..+..+++.++..++  ++ ++++...++.-.+.+.++ |.....++ +...  ..
T Consensus       156 -----~e~-~fn~~G~i~a~~s~~~~al~~I~~~~ll~~~~~~~~~~~ll~y~ap~s~~~Ll~P~~~~~~~-~~~~~~~~  228 (316)
T KOG1441|consen  156 -----TEL-SFNLFGFISAMISNLAFALRNILSKKLLTSKGESLNSMNLLYYTAPISLIFLLIPFLDYVEG-NKFVGFLT  228 (316)
T ss_pred             -----ccc-cccHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCchHHHHHhhhHHHHHHhcchHhhhcc-cceeeeec
Confidence                 133 567799999999999999999999999853  32 678899999989988888 87766554 2220  00


Q ss_pred             eccchhHHHHHHHHHHHHHHHHHHHHHHhhcCceeeeeccchhHHHHHHHHHHHhccccchhhhHHHHHHHhhhhhheec
Q 043160          246 LHFDAKLLSVLYGGFVSCTAYFIMGWLMKRKGPVFVSSFNPLSMVIIAILGSFFIAEELFLGRIVGAIVIVIGLYMVLWG  325 (333)
Q Consensus       246 ~~~~~~~~~l~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~~~~~~~  325 (333)
                      .++........+..++...-+...+..+.+.+|...++.+...-++.++.++++|+|+.|+.+..|+++.++|++++.+.
T Consensus       229 ~~~~~~~~~~~~~sv~~f~~Nls~f~~ig~tSalT~~V~g~~K~~~vi~~s~~iF~~pvt~~n~~G~~iai~Gv~~Y~~~  308 (316)
T KOG1441|consen  229 APWFVTFLILLLNSVLAFLLNLSAFLVIGRTSALTYSVAGHMKRIVVIVVSWLIFGNPVTFLNALGYAIAILGVFLYSRA  308 (316)
T ss_pred             cccchhhHHHHHHHHHHHHHHHHHHHHHcccCchhhhhhccceEEEEEEeEeeeecCCCchhhHHHHHHHHHHHHHHHHH
Confidence            01112233333444446667777888999999999999999999999999999999999999999999999999999998


Q ss_pred             CCCCCCCC
Q 043160          326 RSKDQSPS  333 (333)
Q Consensus       326 ~~~~~~~~  333 (333)
                      |+++++++
T Consensus       309 k~~~~~~~  316 (316)
T KOG1441|consen  309 KLKEKKGK  316 (316)
T ss_pred             hhhhhccC
Confidence            88777654

>COG2510 Predicted membrane protein [Function unknown]

Probab=99.74  E-value=1.1e-17  Score=123.67  Aligned_cols=135  Identities=19%  Similarity=0.281  Sum_probs=122.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHhhcCCC-CCCHHHHHHHHHHHHHHHHHH
Q 043160            9 KPYLGVIFMQFCSSIMSIITKIALTQGMSQHVLVAYRMVVATSLIAPFAIVLERKTRP-KMTFRIFAKIALLGLFEPVIG   87 (333)
Q Consensus         9 ~~~l~~~~~~~~~~~~~~~~k~~l~~~~~~~~~~~~r~~~~~~~l~~~~~~~~~~~~~-~~~~~~~~~~~~~g~~~~~~~   87 (333)
                      ...++++++++.+|...++.|..+ +++||...++.|..+...++..++...++.+.+ ..+.+.|..+.+.|+.+ +++
T Consensus         3 ~~~~~ALLsA~fa~L~~iF~KIGl-~~vdp~~At~IRtiVi~~~l~~v~~~~g~~~~~~~~~~k~~lflilSGla~-gls   80 (140)
T COG2510           3 AAIIYALLSALFAGLTPIFAKIGL-EGVDPDFATTIRTIVILIFLLIVLLVTGNWQAGGEIGPKSWLFLILSGLAG-GLS   80 (140)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHhc-cccCccHHHHHHHHHHHHHHHHHHHhcCceecccccCcceehhhhHHHHHH-HHH
Confidence            568899999999999999999995 889999999999999999999888776665433 34667788888888777 999


Q ss_pred             HHHHHHHhcccchhhHHHhhchHHHHHHHHHHHHhccccceecccchhhHHHHHHHHHHHHHHH
Q 043160           88 QNLYFTGLKCSTATFTVAMCNILPALTFLMAWIFRLEKVKIKSMRSQAKILGTIVTAGGAMCMT  151 (333)
Q Consensus        88 ~~~~~~al~~~~~~~~~~l~~~~pi~~~ll~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~  151 (333)
                      +.+||+|++..+++.+.++-.++|+++++++++++|||+|..+      ++|+.++.+|++++.
T Consensus        81 wl~Yf~ALk~G~as~VvPldk~svvl~~lls~lfL~E~ls~~~------~iG~~LI~~Gailvs  138 (140)
T COG2510          81 WLLYFRALKKGKASRVVPLDKTSVVLAVLLSILFLGERLSLPT------WIGIVLIVIGAILVS  138 (140)
T ss_pred             HHHHHHHHhcCCcceEEEcccccHHHHHHHHHHHhcCCCCHHH------HHHHHHHHhCeeeEe
Confidence            9999999999999999999999999999999999999999998      999999999998764

>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles

Probab=99.67  E-value=4.6e-15  Score=127.55  Aligned_cols=230  Identities=13%  Similarity=0.114  Sum_probs=167.7

Q ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhhHHHhhchHHHHHHHHHHHHhccccceecccchhhHHHHHHHHHHHH
Q 043160           69 TFRIFAKIALLGLFEPVIGQNLYFTGLKCSTATFTVAMCNILPALTFLMAWIFRLEKVKIKSMRSQAKILGTIVTAGGAM  148 (333)
Q Consensus        69 ~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~ll~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~  148 (333)
                      ++++..+..+.+++. ...+.+.++++++.+++..+++.++..++|++++++++|+|++++|      |.++.+.++|+.
T Consensus        13 ~~~~~~~~~vPA~lY-~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~q------W~aL~lL~~Gv~   85 (244)
T PF04142_consen   13 SPKDTLKLAVPALLY-AIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSRRQ------WLALFLLVAGVV   85 (244)
T ss_pred             hHHHHHHHHHHHHHH-HHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccchhh------HHHHHHHHHHHh
Confidence            356778888888887 9999999999999999999999999999999999999999999997      999999999999


Q ss_pred             HHHHhcCCcccCCchhhhhhcccCCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCchHHHHH-HHHHHHH
Q 043160          149 CMTLLKGPILEFPWKQVRILHNQSETGTHNKEEHITKGALMIAAGCFSWSCFIILEAFLLKSYPAELSLTAL-MCFVSSV  227 (333)
Q Consensus       149 li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~-~~~~~~~  227 (333)
                      ++.....+...       .++..+...+... .+...|.++.+.++++.++..++.+|.+|+.+.+...... ....+.+
T Consensus        86 lv~~~~~~~~~-------~~~~~~~~~~~~~-~~~~~G~~~vl~~~~~S~~agVy~E~~lK~~~~s~~~~N~qL~~~gi~  157 (244)
T PF04142_consen   86 LVQLSSSQSSD-------NSSSSSVHHDASN-QNPLLGLLAVLAAAFLSGFAGVYFEKLLKRSNVSLWIQNMQLYLFGIL  157 (244)
T ss_pred             eeecCCccccc-------ccccccccccccc-chhHhHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHH
Confidence            97643221100       0000000011234 5678999999999999999999999999997644433333 3444444


Q ss_pred             HHHHHHHhhccCCccceeeccchhHHHHHHHHHH-HHHHHHHHHHHHhhcCceeeeeccchhHHHHHHHHHHHhccccch
Q 043160          228 EGTILALAIERGNTGIWLLHFDAKLLSVLYGGFV-SCTAYFIMGWLMKRKGPVFVSSFNPLSMVIIAILGSFFIAEELFL  306 (333)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~a~~~~~~~~~~~~~~~~pv~~~~~~~~~~~e~~~~  306 (333)
                      +..+.....++.+..+...  ...+-...+.-++ ..++=.+....+|+.+...=+.....+.+++.+.++.+||.+++.
T Consensus       158 ~~~~~~~~~~~~~~~~~g~--f~G~~~~~~~~i~~~a~gGllva~v~KyadnI~K~fa~a~siv~t~~~s~~lf~~~~s~  235 (244)
T PF04142_consen  158 FNLLALLLSDGSAISESGF--FHGYSWWVWIVIFLQAIGGLLVAFVLKYADNIVKGFATAVSIVLTAVLSVLLFGFPPSL  235 (244)
T ss_pred             HHHHHHhcccccccccCCc--hhhcchHHHHHHHHHHHhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhCCCCch
Confidence            4444433322211111111  1222223333444 666667778889999999999999999999999999999999999


Q ss_pred             hhhHHHHHH
Q 043160          307 GRIVGAIVI  315 (333)
Q Consensus       307 ~~~~G~~li  315 (333)
                      ...+|+.++
T Consensus       236 ~f~lg~~~V  244 (244)
T PF04142_consen  236 SFLLGAALV  244 (244)
T ss_pred             HHhhheecC
Confidence            999998753

P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane

>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]

Probab=99.66  E-value=2.5e-13  Score=118.67  Aligned_cols=299  Identities=12%  Similarity=0.155  Sum_probs=213.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHHHHHHHHHHhhc----CCCC------CCHHHHHH
Q 043160            9 KPYLGVIFMQFCSSIMSIITKIALTQG---MSQHVLVAYRMVVATSLIAPFAIVLERK----TRPK------MTFRIFAK   75 (333)
Q Consensus         9 ~~~l~~~~~~~~~~~~~~~~k~~l~~~---~~~~~~~~~r~~~~~~~l~~~~~~~~~~----~~~~------~~~~~~~~   75 (333)
                      .-.+.++...+.++......|+.-.++   +.|....+.-..+-.++....++...|+    ..+.      ..+++...
T Consensus        15 ~k~~~l~~~t~~~~~l~l~l~ys~~~~~~~f~~tt~v~~~Ei~Kl~~c~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~lk   94 (345)
T KOG2234|consen   15 MKYLSLIVLTAQNTALTLLLRYSRTREKPMFLPTTAVFLTEVIKLVFCLFLLLFEERKYAKKSLKSLSKEILAAPRETLK   94 (345)
T ss_pred             HHHHHHHHHHHHHhhHHHHHHHHhcCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhhHHhhhhhhhcCHHHHhChHHHHH
Confidence            456677778888999999999985344   6677777777777766666665544321    1111      23445666


Q ss_pred             HHHHHHHHHHHHHHHHHHHhcccchhhHHHhhchHHHHHHHHHHHHhccccceecccchhhHHHHHHHHHHHHHHHHhcC
Q 043160           76 IALLGLFEPVIGQNLYFTGLKCSTATFTVAMCNILPALTFLMAWIFRLEKVKIKSMRSQAKILGTIVTAGGAMCMTLLKG  155 (333)
Q Consensus        76 ~~~~g~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~ll~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~~  155 (333)
                      ..+-+++. .+.+.++|.++.+.+++..++..++..+.|++++.+++++|++++|      |.++++.++|+.++.....
T Consensus        95 ~~vPa~iY-alqNnl~yval~~ldaatyqVt~qlKI~tTA~f~vl~L~rkLs~~Q------w~Al~lL~~Gv~~vQ~~~~  167 (345)
T KOG2234|consen   95 VSVPALIY-ALQNNLQYVALSNLDAATYQVTYQLKILTTAIFSVLILRRKLSRLQ------WMALVLLFAGVALVQLPSL  167 (345)
T ss_pred             HHHHHHHH-HHhhhHHHHHHhcCCchhhhhhhhHHHHHHHHHHHHHHhhhhhHHH------HHHHHHHHHHHHHHhccCC
Confidence            77777887 8888899999999999999999999999999999999999999997      9999999999999863211


Q ss_pred             CcccCCchhhhhhcccCCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCchHHHHHHHHHHHHHHHHHHHh
Q 043160          156 PILEFPWKQVRILHNQSETGTHNKEEHITKGALMIAAGCFSWSCFIILEAFLLKSYPAELSLTALMCFVSSVEGTILALA  235 (333)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (333)
                      +.       ++      +.+.... ++...|....+.++...++..++.+|.+|+.+.+......++.+-++.+......
T Consensus       168 ~~-------~~------a~~~~~~-~n~~~G~~avl~~c~~SgfAgvYfEkiLK~s~~s~wi~NiqL~~~g~~f~~l~~~  233 (345)
T KOG2234|consen  168 SP-------TG------AKSESSA-QNPFLGLVAVLVACFLSGFAGVYFEKILKGSNVSLWIRNIQLYFFGILFNLLTIL  233 (345)
T ss_pred             CC-------CC------ccCCCcc-cchhhhHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHh
Confidence            10       00      0112344 6778999999999999999999999999887655545555444444444444433


Q ss_pred             hccCCccceeeccchhHHHHHHHHHH-HHHHHHHHHHHHhhcCceeeeeccchhHHHHHHHHHHHhccccchhhhHHHHH
Q 043160          236 IERGNTGIWLLHFDAKLLSVLYGGFV-SCTAYFIMGWLMKRKGPVFVSSFNPLSMVIIAILGSFFIAEELFLGRIVGAIV  314 (333)
Q Consensus       236 ~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~a~~~~~~~~~~~~~~~~pv~~~~~~~~~~~e~~~~~~~~G~~l  314 (333)
                      ..+.+...+ ......|-.....-++ ...+=.+...-+|+.+-..-.....+..+++.+.++.++|-+||....+|..+
T Consensus       234 ~~d~~~i~~-~gff~G~s~~vw~vVl~~a~gGLlvs~v~KyADnIlK~f~~s~aiilt~v~S~~Lf~~~~t~~F~lG~~l  312 (345)
T KOG2234|consen  234 LQDGEAINE-YGFFYGYSSIVWLVVLLNAVGGLLVSLVMKYADNILKGFSTSVAIILTTVASIALFDFQLTLYFLLGALL  312 (345)
T ss_pred             hcccccccc-CCccccccHHHHHHHHHHhccchhHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHccCCchHHHHHHHHH
Confidence            332121111 1111223333333334 55555555666677777666667778999999999999999999999999999


Q ss_pred             HHhhhhhheecCCCC
Q 043160          315 IVIGLYMVLWGRSKD  329 (333)
Q Consensus       315 i~~g~~~~~~~~~~~  329 (333)
                      ++.++.++...++++
T Consensus       313 Vi~Si~lY~~~P~~~  327 (345)
T KOG2234|consen  313 VILSIFLYSLYPARD  327 (345)
T ss_pred             HHHHHHHhhcCCccc
Confidence            999999999666543

>COG2510 Predicted membrane protein [Function unknown]

Probab=99.65  E-value=6.2e-15  Score=109.14  Aligned_cols=136  Identities=17%  Similarity=0.136  Sum_probs=117.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhhCCCchHHHHHHHHHHHHHHHHHHHhhccCCccceeeccchhHHHHHHHHHHHHHH
Q 043160          186 GALMIAAGCFSWSCFIILEAFLLKSYPAELSLTALMCFVSSVEGTILALAIERGNTGIWLLHFDAKLLSVLYGGFVSCTA  265 (333)
Q Consensus       186 G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  265 (333)
                      ...+++++++++++..++.|-.+++. ||...+..+.....+.+........+  .......+...|..++..|+.++.+
T Consensus         4 ~~~~ALLsA~fa~L~~iF~KIGl~~v-dp~~At~IRtiVi~~~l~~v~~~~g~--~~~~~~~~~k~~lflilSGla~gls   80 (140)
T COG2510           4 AIIYALLSALFAGLTPIFAKIGLEGV-DPDFATTIRTIVILIFLLIVLLVTGN--WQAGGEIGPKSWLFLILSGLAGGLS   80 (140)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhcccc-CccHHHHHHHHHHHHHHHHHHHhcCc--eecccccCcceehhhhHHHHHHHHH
Confidence            35789999999999999999988887 67888889988888888777765432  3332233557899999989779999


Q ss_pred             HHHHHHHHhhcCceeeeeccchhHHHHHHHHHHHhccccchhhhHHHHHHHhhhhhhee
Q 043160          266 YFIMGWLMKRKGPVFVSSFNPLSMVIIAILGSFFIAEELFLGRIVGAIVIVIGLYMVLW  324 (333)
Q Consensus       266 ~~~~~~a~~~~~~~~~~~~~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~~~~~~  324 (333)
                      ..+|++|++..+++.+.++..++|+++.+++++++||++|..+++|+.+|++|+++...
T Consensus        81 wl~Yf~ALk~G~as~VvPldk~svvl~~lls~lfL~E~ls~~~~iG~~LI~~Gailvs~  139 (140)
T COG2510          81 WLLYFRALKKGKASRVVPLDKTSVVLAVLLSILFLGERLSLPTWIGIVLIVIGAILVSL  139 (140)
T ss_pred             HHHHHHHHhcCCcceEEEcccccHHHHHHHHHHHhcCCCCHHHHHHHHHHHhCeeeEec
Confidence            99999999999999999999999999999999999999999999999999999887654

>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]

Probab=99.63  E-value=3.8e-13  Score=115.87  Aligned_cols=290  Identities=13%  Similarity=0.089  Sum_probs=220.5

Q ss_pred             cccHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHH--HHHHHHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHH
Q 043160            6 HHAKPYLGVIFMQFCSSIMSIITKIALTQGMSQHVLVA--YRMVVATSLIAPFAIVLERKTRPKMTFRIFAKIALLGLFE   83 (333)
Q Consensus         6 ~~~~~~l~~~~~~~~~~~~~~~~k~~l~~~~~~~~~~~--~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~   83 (333)
                      +..++....+.-.+.-..+.+..|..+.+.--|..+..  ++.+.+.+.+...-..+. -+.++++++..+.++...++.
T Consensus         9 ~~~~~l~sa~~Y~~sS~lm~vvNK~vls~y~f~~~l~l~~~Q~l~s~~~v~~lk~~~l-v~~~~l~~~~~kk~~P~~~lf   87 (314)
T KOG1444|consen    9 KQSSPLLSALFYCLSSILMTVVNKIVLSSYNFPMGLLLMLLQSLASVLVVLVLKRLGL-VNFRPLDLRTAKKWFPVSLLF   87 (314)
T ss_pred             hhhhhhHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHhce-eecCCcChHHHHHHccHHHHH
Confidence            34455666666667777788899999755333444443  777766666654432222 224667888899999999998


Q ss_pred             HHHHHHHHHHHhcccchhhHHHhhchHHHHHHHHHHHHhccccceecccchhhHHHHHHHHHHHHHHHHhcCCcccCCch
Q 043160           84 PVIGQNLYFTGLKCSTATFTVAMCNILPALTFLMAWIFRLEKVKIKSMRSQAKILGTIVTAGGAMCMTLLKGPILEFPWK  163 (333)
Q Consensus        84 ~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~ll~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~  163 (333)
                       .+....--.++++.++....++.+..|+++++....++|.|++.+.      +.++...++|......           
T Consensus        88 -~~~i~t~~~slk~lnVpm~tv~kn~tii~~ai~E~lf~~~~~~~~v------~~Sv~~m~~~s~~~~~-----------  149 (314)
T KOG1444|consen   88 -VGMLFTGSKSLKYLNVPMFTVFKNLTIILTAIGEVLFFGKRPSNKV------WASVFAMIIGSVAAAF-----------  149 (314)
T ss_pred             -HHHHHHccccccccCchHHHHHhhchHHHHHHhHHhhcCcCchhhH------HHHHHHHHHHHHhhcc-----------
Confidence             8888888999999999999999999999999999999998888886      8888888888877652           


Q ss_pred             hhhhhcccCCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhCC-CchHHHHHHHHHHHHHHHHHHHhhccCCcc
Q 043160          164 QVRILHNQSETGTHNKEEHITKGALMIAAGCFSWSCFIILEAFLLKSYP-AELSLTALMCFVSSVEGTILALAIERGNTG  242 (333)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (333)
                                   .+. .....|..+++...+.-+.+.+..|+..+..+ +.....++..+.+.........+.++.+..
T Consensus       150 -------------~d~-sf~~~gY~w~~~n~~~~a~~~v~~kk~vd~~~l~~~~lv~yNnl~~L~~l~~~~~~~ge~~~l  215 (314)
T KOG1444|consen  150 -------------TDL-SFNLRGYSWALANCLTTAAFVVYVKKSVDSANLNKFGLVFYNNLLSLPPLLILSFITGELDAL  215 (314)
T ss_pred             -------------ccc-eecchhHHHHHHHHHHHHHHHHHHHHhhccccccceeEEeehhHHHHHHHHHHHHHhcchHHH
Confidence                         122 33445899999999999999999998776654 346678888888888777777665532200


Q ss_pred             cee---eccchhHHHHHHHHHHHHHHHHHHHHHHhhcCceeeeeccchhHHHHHHHHHHHhccccchhhhHHHHHHHhhh
Q 043160          243 IWL---LHFDAKLLSVLYGGFVSCTAYFIMGWLMKRKGPVFVSSFNPLSMVIIAILGSFFIAEELFLGRIVGAIVIVIGL  319 (333)
Q Consensus       243 ~~~---~~~~~~~~~l~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~  319 (333)
                      ..+   ......+..+...+++++.-.++-.++.+..+++..++.+..+...+.+...++.|++.++...+|..+-++|.
T Consensus       216 ~~~~~~~~~~~~~~~~~lScv~gf~isy~s~~ct~~~SAtT~tivG~~n~l~t~l~~ll~~d~~~~~~n~~gll~~~~gg  295 (314)
T KOG1444|consen  216 SLNFDNWSDSSVLVVMLLSCVMGFGISYTSFLCTRVNSATTTTIVGAKNKLLTYLGGLLFGDKPFTFLNVIGLLVGFFGG  295 (314)
T ss_pred             HhhcccccchhHHHHHHHHHHHHHHHHHHHHHHHhhccccceeehhhhhhHHHHHHHHhcCCceechhhhHHHHHHhhhh
Confidence            111   12224456666666668888889999999999999999998888888888888889999999999999999998


Q ss_pred             hhheecCCC
Q 043160          320 YMVLWGRSK  328 (333)
Q Consensus       320 ~~~~~~~~~  328 (333)
                      +++...+.+
T Consensus       296 v~Y~~~~~~  304 (314)
T KOG1444|consen  296 VLYSYATFR  304 (314)
T ss_pred             hHHhhhhhh
Confidence            888866533

>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown

Probab=99.60  E-value=7e-15  Score=113.85  Aligned_cols=125  Identities=23%  Similarity=0.426  Sum_probs=111.6

Q ss_pred             HHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Q 043160           19 FCSSIMSIITKIALTQGMSQHVLVAYRMVVATSLIAPFAIVLERKTRPKMTFRIFAKIALLGLFEPVIGQNLYFTGLKCS   98 (333)
Q Consensus        19 ~~~~~~~~~~k~~l~~~~~~~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~   98 (333)
                      ++||...++.|... ++.||....++|+..+.+ +.++....+++..+..+++++......+.++...++.+++++++++
T Consensus         1 ~~~a~~~~~~k~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~   78 (126)
T PF00892_consen    1 FSWAIYSVFSKKLL-KKISPLSITFWRFLIAGI-LLILLLILGRKPFKNLSPRQWLWLLFLGLLGTALAYLLYFYALKYI   78 (126)
T ss_pred             ceeeeHHHHHHHHh-ccCCHHHHHHHHHHHHHH-HHHHHHhhccccccCCChhhhhhhhHhhccceehHHHHHHHHHHhc
Confidence            46999999999994 669999999999999998 6666666665544666778888889999987799999999999999


Q ss_pred             chhhHHHhhchHHHHHHHHHHHHhccccceecccchhhHHHHHHHHHHHHHHH
Q 043160           99 TATFTVAMCNILPALTFLMAWIFRLEKVKIKSMRSQAKILGTIVTAGGAMCMT  151 (333)
Q Consensus        99 ~~~~~~~l~~~~pi~~~ll~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~  151 (333)
                      +++.++++.++.|+++.+++++++||++++++      ++|+++++.|+.++.
T Consensus        79 ~~~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~------~~g~~l~~~g~~l~~  125 (126)
T PF00892_consen   79 SASIVSILQYLSPVFAAILGWLFLGERPSWRQ------IIGIILIIIGVVLIS  125 (126)
T ss_pred             chhHHHHHHHHHHHHHHHHHHHHcCCCCCHHH------HHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999997      999999999999875

Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane

>KOG2766 consensus Predicted membrane protein [Function unknown]

Probab=99.55  E-value=2.1e-15  Score=124.65  Aligned_cols=271  Identities=13%  Similarity=0.180  Sum_probs=199.4

Q ss_pred             HHHHHHHHHHHhcCC-CHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccch
Q 043160           22 SIMSIITKIALTQGM-SQHVLVAYRMVVATSLIAPFAIVLERKTRPKMTFRIFAKIALLGLFEPVIGQNLYFTGLKCSTA  100 (333)
Q Consensus        22 ~~~~~~~k~~l~~~~-~~~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~  100 (333)
                      ..+...+.....+++ .|...++..+..-+++-.++..++.+     .-...|+..++.+... +=++++...|.||++.
T Consensus        31 t~~a~tss~la~k~iN~Pt~QtFl~Y~LLalVY~~~~~fR~~-----~~~~~~~hYilla~~D-VEaNy~vV~AyQyTsm  104 (336)
T KOG2766|consen   31 TSTAFTSSELARKGINAPTSQTFLNYVLLALVYGPIMLFRRK-----YIKAKWRHYILLAFVD-VEANYFVVKAYQYTSM  104 (336)
T ss_pred             HcchhhhHHHHhccCCCccHHHHHHHHHHHHHHhhHHHhhhH-----HHHHHHHHhhheeEEe-ecccEEEeeehhhcch
Confidence            333334444324444 47778888888888888887765442     1234466688888888 8889999999999999


Q ss_pred             hhHHHhhchHHHHHHHHHHHHhccccceecccchhhHHHHHHHHHHHHHHHHhcCCcccCCchhhhhhcccCCCCCCCcc
Q 043160          101 TFTVAMCNILPALTFLMAWIFRLEKVKIKSMRSQAKILGTIVTAGGAMCMTLLKGPILEFPWKQVRILHNQSETGTHNKE  180 (333)
Q Consensus       101 ~~~~~l~~~~pi~~~ll~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  180 (333)
                      ..+.++-.-....+.+++|+++|.|-++.+      +.|+++|+.|++++++.+-.       .         +++.+. 
T Consensus       105 tSi~lLDcwaip~v~~lsw~fLktrYrlmk------i~gV~iCi~GvvmvV~sDV~-------a---------gd~agg-  161 (336)
T KOG2766|consen  105 TSIMLLDCWAIPCVLVLSWFFLKTRYRLMK------ISGVVICIVGVVMVVFSDVH-------A---------GDRAGG-  161 (336)
T ss_pred             HHHHHHHHhhhHHHHHHHHHHHHHHHhhhe------eeeEEeEecceEEEEEeeec-------c---------ccccCC-
Confidence            999999988888899999999887776665      99999999999998843310       0         112344 


Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCchHHHHHHHHHHHHHHHHHHHhhccCCccceeeccchhHHHHHHHHH
Q 043160          181 EHITKGALMIAAGCFSWSCFIILEAFLLKSYPAELSLTALMCFVSSVEGTILALAIERGNTGIWLLHFDAKLLSVLYGGF  260 (333)
Q Consensus       181 ~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  260 (333)
                      .+..+|+.+.+.++-+||+.++....+.|+. |........-+++++...+-. +.+......  +.++......+--++
T Consensus       162 snp~~GD~lvi~GATlYaVSNv~EEflvkn~-d~~elm~~lgLfGaIIsaIQ~-i~~~~~~~t--l~w~~~i~~yl~f~L  237 (336)
T KOG2766|consen  162 SNPVKGDFLVIAGATLYAVSNVSEEFLVKNA-DRVELMGFLGLFGAIISAIQF-IFERHHVST--LHWDSAIFLYLRFAL  237 (336)
T ss_pred             CCCccCcEEEEecceeeeeccccHHHHHhcC-cHHHHHHHHHHHHHHHHHHHH-hhhccceee--EeehHHHHHHHHHHH
Confidence            5677999999999999999999999988887 557777777788888777774 444312222  333222222222122


Q ss_pred             HHHHHHHHHHHHHhhcCceeeeeccchhHHHHHHHHHHHhccccchhhhHHHHHHHhhhhhheecCC
Q 043160          261 VSCTAYFIMGWLMKRKGPVFVSSFNPLSMVIIAILGSFFIAEELFLGRIVGAIVIVIGLYMVLWGRS  327 (333)
Q Consensus       261 ~~~~~~~~~~~a~~~~~~~~~~~~~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~~~~~~~~~  327 (333)
                      +.+.-|.+.-.-+|..+++..++-..+.-.++.+.  ..||-+.+|...+..+.+..|.+++..+++
T Consensus       238 ~MFllYsl~pil~k~~~aT~~nlslLTsDmwsl~i--~~FgYhv~wLY~laF~~i~~GliiYs~re~  302 (336)
T KOG2766|consen  238 TMFLLYSLAPILIKTNSATMFNLSLLTSDMWSLLI--RTFGYHVDWLYFLAFATIATGLIIYSTREK  302 (336)
T ss_pred             HHHHHHHhhHHheecCCceEEEhhHhHHHHHHHHH--HHHhcchhhhhHHHHHHHHHhhEEeecccc
Confidence            25566666667788889998888888899999988  678999999999999999999888865443

>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=99.53  E-value=5.4e-13  Score=109.22  Aligned_cols=258  Identities=9%  Similarity=0.040  Sum_probs=190.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhhHHHhhchHHHHHHHHH
Q 043160           39 HVLVAYRMVVATSLIAPFAIVLERKTRPKMTFRIFAKIALLGLFEPVIGQNLYFTGLKCSTATFTVAMCNILPALTFLMA  118 (333)
Q Consensus        39 ~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~ll~  118 (333)
                      ..+++.++..-.++.=.+..++++.   +.++..-+.....+... .+++...+.|++++|-....+-.++.|+-+.+++
T Consensus        54 laLVf~qC~~N~vfAkvl~~ir~~~---~~D~t~~~~YaAcs~sY-LlAMVssN~Alq~vpYPTqVlgKScKPIPVMilG  129 (337)
T KOG1580|consen   54 LALVFFQCTANTVFAKVLFLIRKKT---EIDNTPTKMYAACSASY-LLAMVSSNQALQYVPYPTQVLGKSCKPIPVMILG  129 (337)
T ss_pred             HHHHHHHHHHHHHHHHhheeecccc---cccCCcchHHHHHHHHH-HHHHHhccchhcccCCcHHHhcccCCCcceeeee
Confidence            4445666665555543333222221   11122223344444444 8888999999999999999999999999999999


Q ss_pred             HHHhccccceecccchhhHHHHHHHHHHHHHHHHhcCCcccCCchhhhhhcccCCCCCCCcchhhHHHHHHHHHHHHHHH
Q 043160          119 WIFRLEKVKIKSMRSQAKILGTIVTAGGAMCMTLLKGPILEFPWKQVRILHNQSETGTHNKEEHITKGALMIAAGCFSWS  198 (333)
Q Consensus       119 ~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a  198 (333)
                      .++.+.+-++++      ...+.+++.|+.+..+..+...                 ..+. +....|.++.+++-..-+
T Consensus       130 Vl~~~KsY~w~k------Y~cVL~IV~GValFmYK~~Kv~-----------------g~e~-~t~g~GElLL~lSL~mDG  185 (337)
T KOG1580|consen  130 VLFAHKSYHWRK------YCCVLMIVVGVALFMYKENKVG-----------------GAED-KTFGFGELLLILSLAMDG  185 (337)
T ss_pred             hhhhcccccHHH------HHHHHHHHHHHHHhhccccccC-----------------CCcc-cccchHHHHHHHHHHhcc
Confidence            999877777775      9999999999999875433221                 1234 667899999999999999


Q ss_pred             HHHHHHHHHhhhCC-CchHHHHHHHHHHHHHHHHHHHhhcc-CCccceeeccchhHHHHHHHHHHHHHHHHHHHHHHhhc
Q 043160          199 CFIILEAFLLKSYP-AELSLTALMCFVSSVEGTILALAIER-GNTGIWLLHFDAKLLSVLYGGFVSCTAYFIMGWLMKRK  276 (333)
Q Consensus       199 ~~~v~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~a~~~~  276 (333)
                      +....+.+..+++. ..-....++++.+.+.+..-..+... +++.-+....+..|+-+...++.+++++.+.+.-....
T Consensus       186 lTg~~Qdrira~yq~~g~~MM~~~NlwStL~Lg~g~lfTGElweF~yF~~RhP~~~~~l~l~ai~s~LGQ~fIF~tv~~F  265 (337)
T KOG1580|consen  186 LTGSIQDRIRASYQRTGTSMMFYTNLWSTLYLGAGLLFTGELWEFFYFVQRHPYVFWDLTLLAIASCLGQWFIFKTVEEF  265 (337)
T ss_pred             cchhHHHHHHHhhccCchhhHHHHHHHHHHHhhhhheehhhHHHHHHHHHhccHHHHHHHHHHHHHHhhhHHHHHHHHHh
Confidence            99999988877764 23455667777776655544433221 02222222334567778888999999999999999999


Q ss_pred             CceeeeeccchhHHHHHHHHHHHhccccchhhhHHHHHHHhhhhhhee
Q 043160          277 GPVFVSSFNPLSMVIIAILGSFFIAEELFLGRIVGAIVIVIGLYMVLW  324 (333)
Q Consensus       277 ~~~~~~~~~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~~~~~~  324 (333)
                      +|..-+++..++-.++++.+++++++.++..||+|..+++.|...-..
T Consensus       266 gPLtCSivTTTRKfFTil~SVllf~npls~rQwlgtvlVF~aL~~D~~  313 (337)
T KOG1580|consen  266 GPLTCSIVTTTRKFFTILISVLLFNNPLSGRQWLGTVLVFSALTADVV  313 (337)
T ss_pred             CCeeEEEEeehHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHHhhhHhh
Confidence            999999999999999999999999999999999999999999776553

>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=99.51  E-value=4.8e-13  Score=113.83  Aligned_cols=262  Identities=11%  Similarity=0.090  Sum_probs=206.0

Q ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhhHHHhhchHHHHHHH
Q 043160           37 SQHVLVAYRMVVATSLIAPFAIVLERKTRPKMTFRIFAKIALLGLFEPVIGQNLYFTGLKCSTATFTVAMCNILPALTFL  116 (333)
Q Consensus        37 ~~~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~l  116 (333)
                      ++....+.+-+.+.+.-.....+.+++   ...++.++.....+..+ ..+..+-+.|++|++-....+-.++--+-+.+
T Consensus        50 ~~~fL~~~q~l~~~~~s~~~l~~~k~~---~~~~apl~~y~~is~tn-~~s~~~~yeaLKyvSyPtq~LaKscKmIPVml  125 (327)
T KOG1581|consen   50 HSLFLVFCQRLVALLVSYAMLKWWKKE---LSGVAPLYKYSLISFTN-TLSSWCGYEALKYVSYPTQTLAKSCKMIPVML  125 (327)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHhccccc---CCCCCchhHHhHHHHHh-hcchHHHHHHHHhccchHHHHHHHhhhhHHHH
Confidence            577778888888877775544333332   23345567778888888 88899999999999999999999999999999


Q ss_pred             HHHHHhccccceecccchhhHHHHHHHHHHHHHHHHhcCCcccCCchhhhhhcccCCCCCCCcchhhHHHHHHHHHHHHH
Q 043160          117 MAWIFRLEKVKIKSMRSQAKILGTIVTAGGAMCMTLLKGPILEFPWKQVRILHNQSETGTHNKEEHITKGALMIAAGCFS  196 (333)
Q Consensus       117 l~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~  196 (333)
                      ++.++.|.|.+..+      .+...++-.|+.+..+.+..+               ..++.+. ++...|..+....-.+
T Consensus       126 mg~Lvy~~ky~~~e------Yl~~~LIs~GvsiF~l~~~s~---------------s~~~~g~-~ns~~G~~Ll~~~L~f  183 (327)
T KOG1581|consen  126 MGTLVYGRKYSSFE------YLVAFLISLGVSIFSLFPNSD---------------SSSKSGR-ENSPIGILLLFGYLLF  183 (327)
T ss_pred             HHHHHhcCccCcHH------HHHHHHHHhheeeEEEecCCC---------------CccccCC-CCchHhHHHHHHHHHH
Confidence            99999999999887      898888889998876543211               1122455 6788999999999999


Q ss_pred             HHHHHHHHHHHhhhCC-CchHHHHHHHHHHHHHHHHHHHhhccCCccce--eeccchhHHHHHHHHHHHHHHHHHHHHHH
Q 043160          197 WSCFIILEAFLLKSYP-AELSLTALMCFVSSVEGTILALAIERGNTGIW--LLHFDAKLLSVLYGGFVSCTAYFIMGWLM  273 (333)
Q Consensus       197 ~a~~~v~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~~~~~~~~~~~~~~~a~  273 (333)
                      -++-+..++++.+++. ++....++.++...+......+..+. .....  -...++.+.-+.....++.+++.+.++-+
T Consensus       184 DgfTn~tQd~lf~~~k~s~~~mM~~vNLf~~i~~~~~li~qg~-~~~av~F~~~hp~~~~Di~l~s~~gavGQ~FI~~TI  262 (327)
T KOG1581|consen  184 DGFTNATQDSLFKKYKVSSLHMMFGVNLFSAILNGTYLILQGH-LLPAVSFIKEHPDVAFDILLYSTCGAVGQLFIFYTI  262 (327)
T ss_pred             HhhHHhHHHHHhccCCccHhHHHHHHHHHHHHHHHHhhhcCCC-CchHHHHHHcChhHHHHHHHHHHhhhhhhheehhhH
Confidence            9999999999988765 46778888888887776666432221 11111  11223456667777888999999999999


Q ss_pred             hhcCceeeeeccchhHHHHHHHHHHHhccccchhhhHHHHHHHhhhhhheec
Q 043160          274 KRKGPVFVSSFNPLSMVIIAILGSFFIAEELFLGRIVGAIVIVIGLYMVLWG  325 (333)
Q Consensus       274 ~~~~~~~~~~~~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~~~~~~~  325 (333)
                      ++.++.+.+.++.++-++++.++.+.+|+++++.|+.|..+++.|+.+-...
T Consensus       263 ~~FGslt~t~I~ttRk~~si~lS~i~f~h~~s~~q~~g~~iVFg~i~l~~~~  314 (327)
T KOG1581|consen  263 ERFGSLTFTTIMTTRKMVSIMLSCIVFGHPLSSEQWLGVLIVFGGIFLEILL  314 (327)
T ss_pred             hhcccHHHHHHHHHHHHHHHHHHHHHhCCccchhhccCeeeehHHHHHHHHH
Confidence            9999999999999999999999999999999999999999999998886643

>KOG1443 consensus Predicted integral membrane protein [Function unknown]

Probab=99.51  E-value=2.5e-12  Score=109.47  Aligned_cols=254  Identities=15%  Similarity=0.118  Sum_probs=191.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhcCC---CCCCHHH-HHHHHHHHHHHHHHHHHHHHHHhcccchhhHHHhhchHHHH
Q 043160           38 QHVLVAYRMVVATSLIAPFAIVLERKTR---PKMTFRI-FAKIALLGLFEPVIGQNLYFTGLKCSTATFTVAMCNILPAL  113 (333)
Q Consensus        38 ~~~~~~~r~~~~~~~l~~~~~~~~~~~~---~~~~~~~-~~~~~~~g~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~  113 (333)
                      |...+.++.++-.++....-...+++..   -..+|++ .++....++.. +....+.++++++++.+..+...+..++|
T Consensus        45 PLf~ts~h~~v~flfa~~~~~l~~~~~~r~r~~~sw~~~Lr~~aPtalat-a~DIGLSN~sl~yVtlSlYTM~KSSsi~F  123 (349)
T KOG1443|consen   45 PLFVTSLHLAVKFLFAALSRRLYQCSVPRARVVLSWRDYLRRLAPTALAT-ALDIGLSNWSLEYVTLSLYTMTKSSSILF  123 (349)
T ss_pred             chHHHHHHHHHHHHHHHHHHHHHhccCCccccCCcHHHHHHHhhhhhhhh-hcccccccceeeeeeeeeeeeccccHHHH
Confidence            7777787877776666554444343322   2456655 55677788887 99999999999999999999999999999


Q ss_pred             HHHHHHHHhccccceecccchhhHHHHHHHHHHHHHHHHhcCCcccCCchhhhhhcccCCCCCCCcchhhHHHHHHHHHH
Q 043160          114 TFLMAWIFRLEKVKIKSMRSQAKILGTIVTAGGAMCMTLLKGPILEFPWKQVRILHNQSETGTHNKEEHITKGALMIAAG  193 (333)
Q Consensus       114 ~~ll~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a  193 (333)
                      +.+++.++.-||.++.-      ...+.++.+|+.+.++.                        +. +....|..+...+
T Consensus       124 IllFs~if~lEk~~w~L------~l~v~lI~~Glflft~K------------------------sT-qf~i~Gf~lv~~a  172 (349)
T KOG1443|consen  124 ILLFSLIFKLEKFRWAL------VLIVLLIAVGLFLFTYK------------------------ST-QFNIEGFFLVLAA  172 (349)
T ss_pred             HHHHHHHHHhHHHHHHH------HHHHHHHhhheeEEEec------------------------cc-ceeehhHHHHHHH
Confidence            99999999999999885      77777777888887631                        23 4556888888888


Q ss_pred             HHHHHHHHHHHHHHhhhCC----CchHHHHHHHHHHHHHHHHHHHhhccCCccceee-----ccchhHHHHHHHHHHHHH
Q 043160          194 CFSWSCFIILEAFLLKSYP----AELSLTALMCFVSSVEGTILALAIERGNTGIWLL-----HFDAKLLSVLYGGFVSCT  264 (333)
Q Consensus       194 ~~~~a~~~v~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~l~~~~~~~~~  264 (333)
                      +++.++-....+..+++.+    +|.+..+...-...+.++|..+.+|+.....++.     .....+..+...+..+..
T Consensus       173 S~~sGlRW~~tQ~ll~~~~~~~~~P~~ti~~l~p~M~~~Ll~~~l~fEG~~~~~~s~~f~~~d~~~~~rv~g~i~l~g~l  252 (349)
T KOG1443|consen  173 SLLSGLRWAFTQMLLRNQPSAKRNPIDTIFHLQPWMSIGLLPLSLLFEGLHLITSSSIFRFQDTGLILRVIGLISLGGLL  252 (349)
T ss_pred             HHhhhhhHHHHHHHHhcCccccCCCeeeHHHhhhHHHHHHHHHHHHHcccccchhhhHHHhcCccHHHHHHHHHHHHHHH
Confidence            8888887777777776654    5777777777788888899998888733322211     111234444443333333


Q ss_pred             HH---HHHHHHHhhcCceeeeeccchhHHHHHHHHHHHhccccchhhhHHHHHHHhhhhhhe
Q 043160          265 AY---FIMGWLMKRKGPVFVSSFNPLSMVIIAILGSFFIAEELFLGRIVGAIVIVIGLYMVL  323 (333)
Q Consensus       265 ~~---~~~~~a~~~~~~~~~~~~~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~~~~~  323 (333)
                      ++   ...+.-..+.+....++.+-..-+.+.+++.++.+|+++...+.|..+...|+.+..
T Consensus       253 aF~l~~sEflLl~~Ts~ltlSIaGI~Kel~tl~la~ii~~d~ls~lN~~Gl~i~~agi~~~~  314 (349)
T KOG1443|consen  253 AFLLEFSEFLLLSRTSSLTLSIAGIVKEVCTLLLAIIILKDQLSLLNWLGLAICLAGILLHR  314 (349)
T ss_pred             HHHHHHHHHheeeeccceeeeHHHHHHHHHHHHHHHHHhhcchhhhHHHHHHHHHHHHHHhc
Confidence            33   344556778899999999999999999999999999999999999999999999883

>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown

Probab=99.43  E-value=4.1e-13  Score=103.84  Aligned_cols=124  Identities=29%  Similarity=0.459  Sum_probs=105.4

Q ss_pred             HHHHHHHHHHHHHhhhCCCchHHHHHHHHHHHHHHHHHHHhhccCCccceeeccchhHHHHHHHHHH-HHHHHHHHHHHH
Q 043160          195 FSWSCFIILEAFLLKSYPAELSLTALMCFVSSVEGTILALAIERGNTGIWLLHFDAKLLSVLYGGFV-SCTAYFIMGWLM  273 (333)
Q Consensus       195 ~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~a~  273 (333)
                      ++||.+.+..|+..++. |+.....+++..+.+ ..+.....+. ..  ....+...+....+.+++ +.+++.++++++
T Consensus         1 ~~~a~~~~~~k~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~   75 (126)
T PF00892_consen    1 FSWAIYSVFSKKLLKKI-SPLSITFWRFLIAGI-LLILLLILGR-KP--FKNLSPRQWLWLLFLGLLGTALAYLLYFYAL   75 (126)
T ss_pred             ceeeeHHHHHHHHhccC-CHHHHHHHHHHHHHH-HHHHHHhhcc-cc--ccCCChhhhhhhhHhhccceehHHHHHHHHH
Confidence            46899999999999886 678999999999988 6666655544 22  222334567777788888 899999999999


Q ss_pred             hhcCceeeeeccchhHHHHHHHHHHHhccccchhhhHHHHHHHhhhhhhe
Q 043160          274 KRKGPVFVSSFNPLSMVIIAILGSFFIAEELFLGRIVGAIVIVIGLYMVL  323 (333)
Q Consensus       274 ~~~~~~~~~~~~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~~~~~  323 (333)
                      ++.+++.++++.+++|+++.++++++++|++++.+++|+++++.|+++..
T Consensus        76 ~~~~~~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~g~~l~~~g~~l~~  125 (126)
T PF00892_consen   76 KYISASIVSILQYLSPVFAAILGWLFLGERPSWRQIIGIILIIIGVVLIS  125 (126)
T ss_pred             HhcchhHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999988753

Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane

>KOG3912 consensus Predicted integral membrane protein [General function prediction only]

Probab=99.40  E-value=9.1e-12  Score=104.69  Aligned_cols=279  Identities=16%  Similarity=0.178  Sum_probs=198.7

Q ss_pred             HHHHHHHHHHHHhc----C----CCHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCC-------------CHHHHHHHHHH
Q 043160           21 SSIMSIITKIALTQ----G----MSQHVLVAYRMVVATSLIAPFAIVLERKTRPKM-------------TFRIFAKIALL   79 (333)
Q Consensus        21 ~~~~~~~~k~~l~~----~----~~~~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~-------------~~~~~~~~~~~   79 (333)
                      =+.+.+..|++ ++    +    -+|+..+...++.-+.+++.+.+++.|...+..             +.+ ....+.-
T Consensus        15 Gs~Ntl~aKwa-dsi~~eg~pgfqhpvlqal~mFlGEflCl~vf~lir~~sn~~g~~s~~~~ilsq~~~pf~-p~lfl~P   92 (372)
T KOG3912|consen   15 GSFNTLVAKWA-DSIQAEGSPGFQHPVLQALLMFLGEFLCLAVFKLIRLRSNGQGVSSDLDSILSQDSSPFN-PVLFLPP   92 (372)
T ss_pred             ccHHHHHHHHH-HhhhhhCCCccccHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccccccccccCCCC-cceecCh
Confidence            35677888887 32    2    247888887787788888888877766432211             111 1223445


Q ss_pred             HHHHHHHHHHHHHHHhcccchhhHHHhhchHHHHHHHHHHHHhccccceecccchhhHHHHHHHHHHHHHHHHhcCCccc
Q 043160           80 GLFEPVIGQNLYFTGLKCSTATFTVAMCNILPALTFLMAWIFRLEKVKIKSMRSQAKILGTIVTAGGAMCMTLLKGPILE  159 (333)
Q Consensus        80 g~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~ll~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~~~~~~  159 (333)
                      .++. ..+..+.|.|+.+++++.-+.+.....+|+.+++.-+++++++.++      |+|+....+|++++-..+-.   
T Consensus        93 al~D-i~gsslm~vgL~lTsASsfQMlRGaviIFvglfst~~Ln~ti~~~q------Wl~i~fv~lGlviVg~~d~~---  162 (372)
T KOG3912|consen   93 ALCD-IAGSSLMYVGLNLTSASSFQMLRGAVIIFVGLFSTMFLNRTITGRQ------WLGILFVSLGLVIVGSLDVH---  162 (372)
T ss_pred             HHHH-HhhhHHHHHHHHHhhHHHHHHhhcchhhhhHHHHHHHHhcccchhh------HHHHHHHHhhhheeeeeecc---
Confidence            6666 7889999999999999999999999999999999999999999997      99999999999998632200   


Q ss_pred             CCchhhhhhcccCCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhCC-CchHHHHHHHHHHHHHHHHHHHhhcc
Q 043160          160 FPWKQVRILHNQSETGTHNKEEHITKGALMIAAGCFSWSCFIILEAFLLKSYP-AELSLTALMCFVSSVEGTILALAIER  238 (333)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (333)
                                 .+..+-.+. ++...|+++.+.+-+.-|+..+...|.+++.+ +|.....|.-.++.+.+...++...-
T Consensus       163 -----------~~~~p~~d~-s~iitGdllIiiaqiivaiQ~v~Eek~l~~~nV~pl~avg~eGlfG~v~~slL~i~m~y  230 (372)
T KOG3912|consen  163 -----------LVTDPYTDY-SSIITGDLLIIIAQIIVAIQMVCEEKQLKKSNVAPLQAVGWEGLFGLVILSLLAIPMYY  230 (372)
T ss_pred             -----------cccCCcccc-ccchhhhHHHHHHHHHHHHHHHHHHhhhhhccCCHHHHhhhhhhHHHHHHHHHHHHHhh
Confidence                       001111234 56789999999999999999999999888875 68888889888886655554443211


Q ss_pred             C-Cccceeecc---------------chhHHHHHHHHHH-HHHHHHHHHH-HHhhcCceeeeeccchhHHHHHHHHHHHh
Q 043160          239 G-NTGIWLLHF---------------DAKLLSVLYGGFV-SCTAYFIMGW-LMKRKGPVFVSSFNPLSMVIIAILGSFFI  300 (333)
Q Consensus       239 ~-~~~~~~~~~---------------~~~~~~l~~~~~~-~~~~~~~~~~-a~~~~~~~~~~~~~~~~pv~~~~~~~~~~  300 (333)
                      . ....++..+               ......+...|.. +..-|-+-.. -.|+.+++.-.++..++..+.-+++....
T Consensus       231 i~~~~sfS~~~~g~~eD~~~~~~~~~e~p~l~val~~~~vSiAffNfaGlsitk~~SattRmllD~lRt~~IWv~si~m~  310 (372)
T KOG3912|consen  231 IPSGDSFSCNPRGVLEDWGDAFAALQESPSLAVALIGFTVSIAFFNFAGLSITKELSATTRMLLDSLRTYVIWVFSIAMG  310 (372)
T ss_pred             eecCCcCcCCCCcchhhHHHHHHHhcCCchhHHHHhhhhhheeeeeehhhHHHHHhhHHHHHHHHhhhhhhhhHhHHHHH
Confidence            0 010111111               1112223333333 3222222222 24668888889999999999999999999


Q ss_pred             ccccchhhhHHHHHHHhhhhhhe
Q 043160          301 AEELFLGRIVGAIVIVIGLYMVL  323 (333)
Q Consensus       301 ~e~~~~~~~~G~~li~~g~~~~~  323 (333)
                      .|.+...|+.|.++.+.|+++++
T Consensus       311 ~E~f~llqilGFliLi~Gi~lY~  333 (372)
T KOG3912|consen  311 WEYFHLLQILGFLILIMGIILYN  333 (372)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999998876

>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter

Probab=99.38  E-value=1.7e-11  Score=107.44  Aligned_cols=133  Identities=14%  Similarity=0.211  Sum_probs=113.2

Q ss_pred             cccHHHHHHHHHHHHHHHHHHHHHHHHhcCCCH--HHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHH
Q 043160            6 HHAKPYLGVIFMQFCSSIMSIITKIALTQGMSQ--HVLVAYRMVVATSLIAPFAIVLERKTRPKMTFRIFAKIALLGLFE   83 (333)
Q Consensus         6 ~~~~~~l~~~~~~~~~~~~~~~~k~~l~~~~~~--~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~   83 (333)
                      ...+|..++++++++|+...+..|.. .++.++  .....+++.++.+++.++....+++  +..+.+++......++++
T Consensus       125 ~~~~G~~~~l~a~~~~a~~~~~~k~~-~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~--~~~~~~~~~~~~~~~~~~  201 (260)
T TIGR00950       125 INPAGLLLGLGSGISFALGTVLYKRL-VKKEGPELLQFTGWVLLLGALLLLPFAWFLGPN--PQALSLQWGALLYLGLIG  201 (260)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHHhHH-hhcCCchHHHHHHHHHHHHHHHHHHHHHhcCCC--CCcchHHHHHHHHHHHHH
Confidence            34679999999999999999999999 455664  4555578999998888876654333  233566777788889888


Q ss_pred             HHHHHHHHHHHhcccchhhHHHhhchHHHHHHHHHHHHhccccceecccchhhHHHHHHHHHHH
Q 043160           84 PVIGQNLYFTGLKCSTATFTVAMCNILPALTFLMAWIFRLEKVKIKSMRSQAKILGTIVTAGGA  147 (333)
Q Consensus        84 ~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~ll~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv  147 (333)
                      ...++.++++++++.+++.++.+.++.|+++.+++++++||+++..+      +.|..+.+.|+
T Consensus       202 ~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~ll~~~~~~E~~~~~~------~~G~~li~~g~  259 (260)
T TIGR00950       202 TALAYFLWNKGLTLVDPSAASILALAEPLVALLLGLLILGETLSLPQ------LIGGALIIAAV  259 (260)
T ss_pred             HHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhCCCCCHHH------HHHHHHHHHhc
Confidence            89999999999999999999999999999999999999999999997      99999999886

>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long

Probab=99.35  E-value=3.8e-10  Score=96.87  Aligned_cols=251  Identities=16%  Similarity=0.163  Sum_probs=171.9

Q ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCC--HHHHHHHHHHHHHHHHHHHHHHHHHhcccchhhHHHhh-chHHHH
Q 043160           37 SQHVLVAYRMVVATSLIAPFAIVLERKTRPKMT--FRIFAKIALLGLFEPVIGQNLYFTGLKCSTATFTVAMC-NILPAL  113 (333)
Q Consensus        37 ~~~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~--~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~~~~l~-~~~pi~  113 (333)
                      +|......-.+ +++++........+   |..+  .+.+...++.|++. ..++...+.++++.+++.+.++. ..+-+.
T Consensus        11 ~~~~Q~lG~t~-Gali~alv~~~~~~---p~~~~~~~~~~~~~lsG~~W-~iGq~~qf~s~~~~GVS~tmPiStg~QLvg   85 (269)
T PF06800_consen   11 KPANQILGTTI-GALIFALVVFLFRQ---PAFSMSGTSFIVAFLSGAFW-AIGQIGQFKSFKKIGVSKTMPISTGLQLVG   85 (269)
T ss_pred             cHHHHHHHHHH-HHHHHHHHHHHHhC---CCcchHHHHHHHHHHHHHHH-HHHHHHHHHHHHHhcceeeeccchhHHHHH
Confidence            45555544333 33333333333333   3444  37788888889998 99999999999999999999995 688888


Q ss_pred             HHHHHHHHhccccceecccchhhHHHHHHHHHHHHHHHHhcCCcccCCchhhhhhcccCCCCCCCcchhhHHHHHHHHHH
Q 043160          114 TFLMAWIFRLEKVKIKSMRSQAKILGTIVTAGGAMCMTLLKGPILEFPWKQVRILHNQSETGTHNKEEHITKGALMIAAG  193 (333)
Q Consensus       114 ~~ll~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a  193 (333)
                      +.+++.++++|--+..+.  ..-.+++++.++|+.+.+..++++..                .++. ++...|....+.+
T Consensus        86 ~sl~gv~~fgEW~~~~~~--~~G~~Al~liiiGv~lts~~~~~~~~----------------~~~~-~~~~kgi~~Ll~s  146 (269)
T PF06800_consen   86 TSLIGVLFFGEWTTTTQK--IIGFLALVLIIIGVILTSYQDKKSDK----------------SSSK-SNMKKGILALLIS  146 (269)
T ss_pred             HHHHHHhhcCCCCCcchH--HHHHHHHHHHHHHHHHhccccccccc----------------cccc-cchhhHHHHHHHH
Confidence            999999999998876650  11134778888899887754332110                0124 5667899999999


Q ss_pred             HHHHHHHHHHHHHHhhhCCCchHHHHHHHHHHHHHHHHHHHhhccCCccceeeccchhHHHHHHHHHHHHHHHHHHHHHH
Q 043160          194 CFSWSCFIILEAFLLKSYPAELSLTALMCFVSSVEGTILALAIERGNTGIWLLHFDAKLLSVLYGGFVSCTAYFIMGWLM  273 (333)
Q Consensus       194 ~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~a~  273 (333)
                      .+.|..|.+..|..  +. ++.....=+.+-..+....+....++ ...     ....|.. +..|++-.++..++..+.
T Consensus       147 tigy~~Y~~~~~~~--~~-~~~~~~lPqaiGm~i~a~i~~~~~~~-~~~-----~k~~~~n-il~G~~w~ignl~~~is~  216 (269)
T PF06800_consen  147 TIGYWIYSVIPKAF--HV-SGWSAFLPQAIGMLIGAFIFNLFSKK-PFF-----EKKSWKN-ILTGLIWGIGNLFYLISA  216 (269)
T ss_pred             HHHHHHHHHHHHhc--CC-ChhHhHHHHHHHHHHHHHHHhhcccc-ccc-----ccchHHh-hHHHHHHHHHHHHHHHhH
Confidence            99999999986652  22 34444443332222222222221111 111     1122333 456888888899999999


Q ss_pred             hhcCceeeeeccchhHHHHHHHHHHHhccccchhh----hHHHHHHHhhhhh
Q 043160          274 KRKGPVFVSSFNPLSMVIIAILGSFFIAEELFLGR----IVGAIVIVIGLYM  321 (333)
Q Consensus       274 ~~~~~~~~~~~~~~~pv~~~~~~~~~~~e~~~~~~----~~G~~li~~g~~~  321 (333)
                      ++.+.+..=.+..+..+++.+.+.+++||+=+..+    .+|.++++.|.++
T Consensus       217 ~~~G~a~af~lSQ~~vvIStlgGI~il~E~Kt~ke~~~~~~G~~Liv~G~il  268 (269)
T PF06800_consen  217 QKNGVATAFTLSQLGVVISTLGGIFILKEKKTKKEMIYTLIGLILIVIGAIL  268 (269)
T ss_pred             HhccchhhhhHHhHHHHHHHhhhheEEEecCchhhHHHHHHHHHHHHHhhhc
Confidence            99999999999999999999999999999977664    4788888888654

Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane

>PRK13499 rhamnose-proton symporter; Provisional

Probab=99.35  E-value=2.9e-09  Score=95.10  Aligned_cols=304  Identities=12%  Similarity=0.055  Sum_probs=188.6

Q ss_pred             ccccccHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHH--HHhh---cCCCCCCHHHHHHHH
Q 043160            3 LQYHHAKPYLGVIFMQFCSSIMSIITKIALTQGMSQHVLVAYRMVVATSLIAPFAI--VLER---KTRPKMTFRIFAKIA   77 (333)
Q Consensus         3 ~~~~~~~~~l~~~~~~~~~~~~~~~~k~~l~~~~~~~~~~~~r~~~~~~~l~~~~~--~~~~---~~~~~~~~~~~~~~~   77 (333)
                      |+++...|++..+++.++||...+-.|..  +..+-..+-..-.+++.+ +.|+..  ...+   ......+.+.+...+
T Consensus         1 m~~~~~~G~~~~~i~~~~~GS~~~p~K~~--k~w~wE~~W~v~gi~~wl-~~~~~~g~~~~~~f~~~~~~~~~~~~~~~~   77 (345)
T PRK13499          1 MSNAIILGIIWHLIGGASSGSFYAPFKKV--KKWSWETMWSVGGIFSWL-ILPWLIAALLLPDFWAYYSSFSGSTLLPVF   77 (345)
T ss_pred             CCchhHHHHHHHHHHHHHhhccccccccc--CCCchhHHHHHHHHHHHH-HHHHHHHHHHhhhHHHHHHhcCHHHHHHHH
Confidence            45567889999999999999999999985  434422221111111111 111111  1111   112234567788888


Q ss_pred             HHHHHHHHHHHHHHHHHhcccchhhHHHh-hchHHHHHHHHHHHHhcccc---ceecccchhhHHHHHHHHHHHHHHHHh
Q 043160           78 LLGLFEPVIGQNLYFTGLKCSTATFTVAM-CNILPALTFLMAWIFRLEKV---KIKSMRSQAKILGTIVTAGGAMCMTLL  153 (333)
Q Consensus        78 ~~g~~~~~~~~~~~~~al~~~~~~~~~~l-~~~~pi~~~ll~~~~~~e~~---~~~~~~~~~~~~g~~l~~~Gv~li~~~  153 (333)
                      +.|++. ..++..++.++++...+.+.++ ..++-+...++..++++|=-   +..+  ...-.+|++++++|+.+....
T Consensus        78 l~G~~W-~iG~i~~~~s~~~iGvS~~~pIs~Gl~lv~gtL~~~i~~gew~~~~~t~~--g~~~~~gv~liliGi~l~s~A  154 (345)
T PRK13499         78 LFGALW-GIGGITYGLTMRYLGMSLGIGIAIGITLIVGTLMPPIINGNFDVLLATNG--GRMTLLGVLVALIGVAIVGRA  154 (345)
T ss_pred             HHHHHH-HhhhhhHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHccccccccccch--HHHHHHHHHHHHHHHHHHHHh
Confidence            899998 9999999999999999999988 56999999999999988643   2221  223478999999999998753


Q ss_pred             cCCcccCCchhhhhhcccCCCCCCCcchhhHHHHHHHHHHHHHHHHHH-------HHHHHHhhhCCCchHHHHHHHH---
Q 043160          154 KGPILEFPWKQVRILHNQSETGTHNKEEHITKGALMIAAGCFSWSCFI-------ILEAFLLKSYPAELSLTALMCF---  223 (333)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~-------v~~~~~~~~~~~~~~~~~~~~~---  223 (333)
                      ....+        .  ++++ ++.+. .+..+|...++.+.+.+++|+       ...+...+...++.....-+..   
T Consensus       155 g~~k~--------~--~~~~-~~~~~-~~~~KGi~ialisgi~~~~f~~~~~~~~~~~~~a~~~g~~~~~~~lp~~~~~~  222 (345)
T PRK13499        155 GQLKE--------R--KMGI-KKAEE-FNLKKGLILAVMSGIFSACFSFAMDAGKPMHEAAAALGVDPLYAALPSYVVIM  222 (345)
T ss_pred             hhhcc--------c--cccc-ccccc-cchHhHHHHHHHHHHHHHHHHHHHhhccchhhhhhhcCCCchHHHHHHHHHHH
Confidence            21110        0  0000 00233 577899999999999999998       4433321111133322222222   


Q ss_pred             HHHHHHHHH-HHh---hccCCc---cceeecc---chhHHHHHHHHHHHHHHHHHHHHHHhhcCceeeee---c-cchhH
Q 043160          224 VSSVEGTIL-ALA---IERGNT---GIWLLHF---DAKLLSVLYGGFVSCTAYFIMGWLMKRKGPVFVSS---F-NPLSM  289 (333)
Q Consensus       224 ~~~~~~~~~-~~~---~~~~~~---~~~~~~~---~~~~~~l~~~~~~~~~~~~~~~~a~~~~~~~~~~~---~-~~~~p  289 (333)
                      .+.+..... ...   ..+ +.   .+...+.   ..+...-+..|+.-.+++.++..+.++.+......   + +....
T Consensus       223 ~G~~~~n~~~~~~~~~k~~-~~~~~~~~~~~~~~~~~n~l~~~l~G~~W~~~~~~y~~~~~~~g~~~~~~sw~l~m~~~V  301 (345)
T PRK13499        223 GGGAITNLGFCFIRLAKNK-DLSLKADFSLAKPLLITNVLLSALAGVMWYLQFFFYAMGHSKLGAQYDFVSWMLHMSFYV  301 (345)
T ss_pred             HHHHHHHHHHHHHHHhhCC-CcccchhccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccchHHHHHhccHHH
Confidence            333333221 111   111 11   1111110   12223334556667788888888888876654433   3 37788


Q ss_pred             HHHHHHHHHHhccccc------hhhhHHHHHHHhhhhhheecC
Q 043160          290 VIIAILGSFFIAEELF------LGRIVGAIVIVIGLYMVLWGR  326 (333)
Q Consensus       290 v~~~~~~~~~~~e~~~------~~~~~G~~li~~g~~~~~~~~  326 (333)
                      +++.+.+. ++||.=+      ..-++|+++++.|..+....+
T Consensus       302 iistlwGi-~lkE~K~a~~k~~~~l~~G~vliI~g~~lig~~~  343 (345)
T PRK13499        302 LCGNLWGL-VLKEWKGASRRPVRVLSLGCVVIILAANIVGLGN  343 (345)
T ss_pred             HHHHHhhh-hhhhccCCCccchhHHHHHHHHHHHHHHHHhhcc
Confidence            99999998 5999866      566899999999988876554

>PF13536 EmrE: Multidrug resistance efflux transporter

Probab=99.31  E-value=1e-11  Score=94.34  Aligned_cols=104  Identities=17%  Similarity=0.326  Sum_probs=86.5

Q ss_pred             HHHHHHHHHHHHHHHHHHhhcC--CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhhHHHhhchHHHHHHHHHHH
Q 043160           43 AYRMVVATSLIAPFAIVLERKT--RPKMTFRIFAKIALLGLFEPVIGQNLYFTGLKCSTATFTVAMCNILPALTFLMAWI  120 (333)
Q Consensus        43 ~~r~~~~~~~l~~~~~~~~~~~--~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~ll~~~  120 (333)
                      .+|+.++.+++..+...+++.+  .+..+++.+.+....|.++...++.++++|+++.+ +.++++.++.|+++.+++++
T Consensus         2 a~r~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~-~~v~~i~~~~pi~~~ll~~~   80 (113)
T PF13536_consen    2 AFRYLFSVLFLLIILLIRGRLRDLFRALRRKPWLWLILAGLLGFGVAYLLFFYALSYAP-ALVAAIFSLSPIFTALLSWL   80 (113)
T ss_pred             HHHHHHHHHHHHHHHHHHccHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHHH
Confidence            5789999999888877644321  12333455667777788885699999999999999 58889999999999999999


Q ss_pred             HhccccceecccchhhHHHHHHHHHHHHHHHHh
Q 043160          121 FRLEKVKIKSMRSQAKILGTIVTAGGAMCMTLL  153 (333)
Q Consensus       121 ~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~  153 (333)
                      ++|||+++++      +.+++++++|++++...
T Consensus        81 ~~~er~~~~~------~~a~~l~~~Gv~li~~~  107 (113)
T PF13536_consen   81 FFKERLSPRR------WLAILLILIGVILIAWS  107 (113)
T ss_pred             HhcCCCCHHH------HHHHHHHHHHHHHHhhh
Confidence            9999999997      99999999999999853

>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]

Probab=99.31  E-value=9.5e-12  Score=99.36  Aligned_cols=221  Identities=17%  Similarity=0.165  Sum_probs=167.5

Q ss_pred             HHHHHHHHHHHHHHHHHHhcccchhhHHHhhchHHHHHHHHHHHHhccccceecccchhhHHHHHHHHHHHHHHHHhcCC
Q 043160           77 ALLGLFEPVIGQNLYFTGLKCSTATFTVAMCNILPALTFLMAWIFRLEKVKIKSMRSQAKILGTIVTAGGAMCMTLLKGP  156 (333)
Q Consensus        77 ~~~g~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~ll~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~~~  156 (333)
                      ...+++. ...++.|..|++..+++.++.+..+...|+.+++++.+|||++..+      +++.++++.|++++.+.++ 
T Consensus        57 aPF~i~W-t~aNY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~~~~~k------IlaailAI~GiVmiay~DN-  128 (290)
T KOG4314|consen   57 APFSIFW-TGANYLYLLALKKISASDASAIFACNAAFVFILAIIVLGDRFMGFK------ILAAILAIGGIVMIAYADN-  128 (290)
T ss_pred             cceEEEE-ecCCcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHHhccchhhhh------HHHHHHHhCcEEEEEeccc-
Confidence            3444555 7789999999999999999999999999999999999999999887      9999999999999874332 


Q ss_pred             cccCCchhhhhhcccCCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCchHHHHHHHH--HH--HHHHHHH
Q 043160          157 ILEFPWKQVRILHNQSETGTHNKEEHITKGALMIAAGCFSWSCFIILEAFLLKSYPAELSLTALMCF--VS--SVEGTIL  232 (333)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~--~~--~~~~~~~  232 (333)
                                           .. ...+.|..+++.+++..|+|-+.-|+.....+-.....+..++  +.  ....-+.
T Consensus       129 ---------------------~~-a~e~iGi~~AV~SA~~aAlYKV~FK~~iGnAn~Gdaa~FmS~LGF~NL~~~~~~~l  186 (290)
T KOG4314|consen  129 ---------------------EH-ADEIIGIACAVGSAFMAALYKVLFKMFIGNANFGDAAHFMSCLGFFNLCFISFPAL  186 (290)
T ss_pred             ---------------------hh-hhhhhhHHHHHHHHHHHHHHHHHHHHHhccCcchhHHHHHHHHHHHHHHHHhhhHH
Confidence                                 33 5678999999999999999999999887665311111221111  11  1111122


Q ss_pred             HHhhccCCccceeeccchhHHHHHHHHHHHHHHHHHHHHHHhhcCceeeeeccchhHHHHHHHHHHHhccccchhhhHHH
Q 043160          233 ALAIERGNTGIWLLHFDAKLLSVLYGGFVSCTAYFIMGWLMKRKGPVFVSSFNPLSMVIIAILGSFFIAEELFLGRIVGA  312 (333)
Q Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~pv~~~~~~~~~~~e~~~~~~~~G~  312 (333)
                      .+.+.  ....++......|..+...+.++..-.++.+.+.....|...++-.....+-....+.++-+-..+...++|.
T Consensus       187 IL~~T--~VE~~qsFA~~PWG~l~G~A~L~lAFN~~iN~GiaL~~PilISiG~l~~iP~NaaiDiL~q~l~~ntl~La~T  264 (290)
T KOG4314|consen  187 ILAFT--GVEHLQSFAAAPWGCLCGAAGLSLAFNFLINFGIALLNPILISIGMLCGIPGNAAIDILFQELEFNTLFLAAT  264 (290)
T ss_pred             HHHHh--chHHHHHHhhCCchhhhhHHHHHHHHhhheeehhhhhchhhheehheecCcchhHHHHHHHHHHHHHHHHHHH
Confidence            22222  2333332223457777776666777778888999999999999999999999999999877778999999999


Q ss_pred             HHHHhhhhhheecCCCC
Q 043160          313 IVIVIGLYMVLWGRSKD  329 (333)
Q Consensus       313 ~li~~g~~~~~~~~~~~  329 (333)
                      ++|+.|-+++..++.+.
T Consensus       265 ~iI~i~FiLiiiP~d~~  281 (290)
T KOG4314|consen  265 CIICIGFILIIIPEDKD  281 (290)
T ss_pred             HHHHHhHHheecccchh
Confidence            99999999888776554

>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]

Probab=99.27  E-value=3.1e-11  Score=98.27  Aligned_cols=274  Identities=14%  Similarity=0.131  Sum_probs=197.1

Q ss_pred             HHHHHHHHHhc-CCC-HHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccchh
Q 043160           24 MSIITKIALTQ-GMS-QHVLVAYRMVVATSLIAPFAIVLERKTRPKMTFRIFAKIALLGLFEPVIGQNLYFTGLKCSTAT  101 (333)
Q Consensus        24 ~~~~~k~~l~~-~~~-~~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~  101 (333)
                      +.+..|+.++. +++ -+.+.+++.+...+-+..+-..+..+.    +.++.+.++..+.+. ....+.--.+++|++..
T Consensus        21 mTltNKyVls~~gfnMnflll~vQSlvcvv~l~iLk~l~~~~f----R~t~aK~WfpiSfLL-v~MIyt~SKsLqyL~vp   95 (309)
T COG5070          21 MTLTNKYVLSNLGFNMNFLLLAVQSLVCVVGLLILKFLRLVEF----RLTKAKKWFPISFLL-VVMIYTSSKSLQYLAVP   95 (309)
T ss_pred             HHHhhHheecCCCCchhhHHHHHHHHHHHHHHHHHHHHhHhhe----ehhhhhhhcCHHHHH-HHHHHhcccceeeeeee
Confidence            45556766422 333 244456666665555554433333222    234444455566665 55666677899999999


Q ss_pred             hHHHhhchHHHHHHHHHHHHhccccceecccchhhHHHHHHHHHHHHHHHHhcCCcccCCchhhhhhcccCCCCCCCcch
Q 043160          102 FTVAMCNILPALTFLMAWIFRLEKVKIKSMRSQAKILGTIVTAGGAMCMTLLKGPILEFPWKQVRILHNQSETGTHNKEE  181 (333)
Q Consensus       102 ~~~~l~~~~pi~~~ll~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  181 (333)
                      ..+++.++..+.++.....++|.|++..+      ..+-++.+...+.....+         +....        ... .
T Consensus        96 iYTiFKNltII~iAygEvl~Fgg~vtsl~------l~SFilMvlSS~va~w~D---------~q~~~--------~~~-~  151 (309)
T COG5070          96 IYTIFKNLTIILIAYGEVLFFGGRVTSLE------LLSFILMVLSSVVATWGD---------QQASA--------FKA-Q  151 (309)
T ss_pred             HHHHhccceeehhHhhHHHHhcCccchhh------HHHHHHHHHHHHHhccch---------hhHHH--------HHh-c
Confidence            99999999999999999999999999998      888888777666654211         11100        112 2


Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHhhhCC-CchHHHHHHHHHHHHHHHHHHHhhccCCccceeec-cchhHHHHHHHH
Q 043160          182 HITKGALMIAAGCFSWSCFIILEAFLLKSYP-AELSLTALMCFVSSVEGTILALAIERGNTGIWLLH-FDAKLLSVLYGG  259 (333)
Q Consensus       182 ~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~  259 (333)
                      ..+.|.+++...++..+.+....|+..+-.+ .+....+|....+...+..+..+.|++++...... +......+.+.|
T Consensus       152 ~lN~GY~Wm~~NclssaafVL~mrkri~ltNf~d~dtmfYnNllslPiL~~~s~~~edws~~n~annl~~d~l~am~ISg  231 (309)
T COG5070         152 ILNPGYLWMFTNCLSSAAFVLIMRKRIKLTNFKDFDTMFYNNLLSLPILLSFSFLFEDWSPGNLANNLSVDSLMAMFISG  231 (309)
T ss_pred             ccCCceEEEehhhHhHHHHHHHHHHhhcccccchhhHHHHhhhHHHHHHHHHHHHhccCCcchhhcCCChHHHHHHHHHH
Confidence            4457899999999999999888887666543 35778899999999999999988886554432211 113345666778


Q ss_pred             HHHHHHHHHHHHHHhhcCceeeeeccchhHHHHHHHHHHHhccccchhhhHHHHHHHhhhhhheecC
Q 043160          260 FVSCTAYFIMGWLMKRKGPVFVSSFNPLSMVIIAILGSFFIAEELFLGRIVGAIVIVIGLYMVLWGR  326 (333)
Q Consensus       260 ~~~~~~~~~~~~a~~~~~~~~~~~~~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~~~~~~~~  326 (333)
                      ++++...++-.|+++..+.+..++++.++..-..+.|.+++||+.+..++..+.+-..+...+...+
T Consensus       232 l~svgiSy~saWcvrVtSSTtySMvGALNKlp~alaGlvffdap~nf~si~sillGflsg~iYavak  298 (309)
T COG5070         232 LCSVGISYCSAWCVRVTSSTTYSMVGALNKLPIALAGLVFFDAPVNFLSIFSILLGFLSGAIYAVAK  298 (309)
T ss_pred             HHHhhhhhccceeEeehhhhHHHHHHHhhhChHHHhhhhhcCCchhHHHHHHHHHHHHHHHHHHHHH
Confidence            8877778888999999999999999999999999999999999999999999888877655555433

>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function

Probab=99.24  E-value=1e-09  Score=97.33  Aligned_cols=283  Identities=13%  Similarity=0.168  Sum_probs=160.5

Q ss_pred             ccccccHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCHHH-HHHHHHHHH
Q 043160            3 LQYHHAKPYLGVIFMQFCSSIMSIITKIALTQGMSQHVLVAYRMVVATSLIAPFAIVLERKTRPKMTFRI-FAKIALLGL   81 (333)
Q Consensus         3 ~~~~~~~~~l~~~~~~~~~~~~~~~~k~~l~~~~~~~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~g~   81 (333)
                      |+.....|.+..+.++++-+....+-|....+ .+.   .-                 .|+  .+.+++. ..+..+.|.
T Consensus         1 ~~~~~~iGv~lav~ss~~~~~g~~lqk~~~~r-~~~---~~-----------------~~~--~~~~~~~l~~~~W~~G~   57 (300)
T PF05653_consen    1 MNTDFYIGVLLAVVSSIFIAVGFNLQKKSHLR-LPR---GS-----------------LRA--GSGGRSYLRRPLWWIGL   57 (300)
T ss_pred             CCchhHHHHHHHHHHHHHHHHHHHHHHHHHHH-hhc---cc-----------------ccc--cchhhHHHhhHHHHHHH
Confidence            56667789999999999999999988887321 110   00                 000  0001111 122344555


Q ss_pred             HHHHHHHHHHHHHhcccchhhHHHhhchHHHHHHHHHHHHhccccceecccchhhHHHHHHHHHHHHHHHHhcCCcccCC
Q 043160           82 FEPVIGQNLYFTGLKCSTATFTVAMCNILPALTFLMAWIFRLEKVKIKSMRSQAKILGTIVTAGGAMCMTLLKGPILEFP  161 (333)
Q Consensus        82 ~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~ll~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~  161 (333)
                      +...++..+.+.|+.+.|++..+++....-++.++++..++|||+++++      +.|+.+++.|..++... +|+....
T Consensus        58 ~~~~~g~~~~~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~~~~~------~~G~~l~i~G~~liv~~-~~~~~~~  130 (300)
T PF05653_consen   58 LLMVLGEILNFVALGFAPASLVAPLGALSLVFNAVLARFFLGEKLTRRD------IVGCALIILGSVLIVIF-APKEEPI  130 (300)
T ss_pred             HHHhcchHHHHHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcccchHhH------HhhHHHHHhhheeeEEe-CCCCCCc
Confidence            5557788889999999999999999999999999999999999999998      99999999999887643 2322111


Q ss_pred             chhhhhhcccCCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCchHHHHHHHHHHHH-------HHHHHHH
Q 043160          162 WKQVRILHNQSETGTHNKEEHITKGALMIAAGCFSWSCFIILEAFLLKSYPAELSLTALMCFVSSV-------EGTILAL  234 (333)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~  234 (333)
                      .+..+....      -.+ ... ...... .......+.....+|..++  +...........++.       ....+..
T Consensus       131 ~t~~~l~~~------~~~-~~f-l~y~~~-~~~~~~~L~~~~~~r~g~~--~i~vyi~i~sl~Gs~tvl~~K~i~~~i~~  199 (300)
T PF05653_consen  131 HTLDELIAL------LSQ-PGF-LVYFIL-VLVLILILIFFIKPRYGRR--NILVYISICSLIGSFTVLSAKAISILIKL  199 (300)
T ss_pred             CCHHHHHHH------hcC-cce-ehhHHH-HHHHHHHHHHhhcchhccc--ceEEEEEEeccccchhhhHHHHHHHHHHH
Confidence            111111000      000 011 111111 1112222222222221111  111000000011111       0111111


Q ss_pred             hhccCCccceeeccchhHHHHHHHHHHHHHHHHHHHHHHhhcCceeeeeccchh-HHHHHHHHHHHhccc--cch----h
Q 043160          235 AIERGNTGIWLLHFDAKLLSVLYGGFVSCTAYFIMGWLMKRKGPVFVSSFNPLS-MVIIAILGSFFIAEE--LFL----G  307 (333)
Q Consensus       235 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~-pv~~~~~~~~~~~e~--~~~----~  307 (333)
                      ..++  ..++  .....|..++.+..+........++|+++.+++.+.++.+.. ...+++-|.++++|.  .+.    .
T Consensus       200 ~~~g--~~~f--~~~~~y~l~~~~v~~~~~Q~~~LN~aL~~fd~~~V~P~~~v~~t~~~i~~g~i~f~e~~~~~~~~~~~  275 (300)
T PF05653_consen  200 TFSG--DNQF--TYPLTYLLLLVLVVTAVLQLYYLNKALKRFDTSLVVPVYYVFFTLSSIIGGAIFFQEFSRMTAWQIIG  275 (300)
T ss_pred             HhcC--chhh--hhhHHHHHHHHHHHHHHHHHHHHHHHHHhccceEEEeehhHHHHHHHHHHHHHHhcccccccHHHHHH
Confidence            1111  1222  222334444333333666677788999999999998888774 455566677788876  444    3


Q ss_pred             hhHHHHHHHhhhhhheecCCCCC
Q 043160          308 RIVGAIVIVIGLYMVLWGRSKDQ  330 (333)
Q Consensus       308 ~~~G~~li~~g~~~~~~~~~~~~  330 (333)
                      ...|+.+++.|+++....|+++.
T Consensus       276 ~~~G~~~ii~GV~lL~~~~~~~~  298 (300)
T PF05653_consen  276 FLCGFLIIIIGVFLLSSSKDKEI  298 (300)
T ss_pred             HHHHHHHHHHhhheeeccCchhc
Confidence            45778889999999987776554

>PRK10532 threonine and homoserine efflux system; Provisional

Probab=99.24  E-value=5.7e-10  Score=99.46  Aligned_cols=135  Identities=13%  Similarity=0.102  Sum_probs=111.8

Q ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHH
Q 043160            8 AKPYLGVIFMQFCSSIMSIITKIALTQGMSQHVLVAYRMVVATSLIAPFAIVLERKTRPKMTFRIFAKIALLGLFEPVIG   87 (333)
Q Consensus         8 ~~~~l~~~~~~~~~~~~~~~~k~~l~~~~~~~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~   87 (333)
                      ..|.++.+.++++|+...+..|.. .++.++..... ...++.+.+.++......  ....++..+...+..|++++.++
T Consensus       147 ~~G~ll~l~aa~~~a~~~v~~r~~-~~~~~~~~~~~-~~~~~~~~l~~~~~~~~~--~~~~~~~~~~~~l~lgv~~t~~~  222 (293)
T PRK10532        147 LTGAALALGAGACWAIYILSGQRA-GAEHGPATVAI-GSLIAALIFVPIGALQAG--EALWHWSILPLGLAVAILSTALP  222 (293)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHH-hccCCchHHHH-HHHHHHHHHHHHHHHccC--cccCCHHHHHHHHHHHHHHHHHH
Confidence            458999999999999999999998 56677777654 455666666666544322  12234555666678999988999


Q ss_pred             HHHHHHHhcccchhhHHHhhchHHHHHHHHHHHHhccccceecccchhhHHHHHHHHHHHHHHHH
Q 043160           88 QNLYFTGLKCSTATFTVAMCNILPALTFLMAWIFRLEKVKIKSMRSQAKILGTIVTAGGAMCMTL  152 (333)
Q Consensus        88 ~~~~~~al~~~~~~~~~~l~~~~pi~~~ll~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~  152 (333)
                      +.++++++++.+++.++++.+++|+++.+++++++||+++..+      ++|.+++++|++....
T Consensus       223 ~~l~~~~~~~~~a~~as~~~~l~Pv~a~l~~~l~lgE~~~~~~------~iG~~lIl~~~~~~~~  281 (293)
T PRK10532        223 YSLEMIALTRLPTRTFGTLMSMEPALAAVSGMIFLGETLTLIQ------WLALGAIIAASMGSTL  281 (293)
T ss_pred             HHHHHHHHHhcChhHHHHHHHhHHHHHHHHHHHHhCCCCcHHH------HHHHHHHHHHHHHHHh
Confidence            9999999999999999999999999999999999999999998      9999999999999864

>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional

Probab=99.22  E-value=5.4e-10  Score=99.58  Aligned_cols=137  Identities=13%  Similarity=0.091  Sum_probs=114.7

Q ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHH
Q 043160            8 AKPYLGVIFMQFCSSIMSIITKIALTQGMSQHVLVAYRMVVATSLIAPFAIVLERKTRPKMTFRIFAKIALLGLFEPVIG   87 (333)
Q Consensus         8 ~~~~l~~~~~~~~~~~~~~~~k~~l~~~~~~~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~   87 (333)
                      ..|.++.++++++|+......|.. .+. ++.....+++.++.+.+.++............+.+.+..+...++++...+
T Consensus       149 ~~G~l~~l~a~~~~a~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~i~~s~~~  226 (292)
T PRK11272        149 PWGAILILIASASWAFGSVWSSRL-PLP-VGMMAGAAEMLAAGVVLLIASLLSGERLTALPTLSGFLALGYLAVFGSIIA  226 (292)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHhc-CCC-cchHHHHHHHHHHHHHHHHHHHHcCCcccccCCHHHHHHHHHHHHHHHHHH
Confidence            469999999999999999999987 443 345566788888888887766543322111234577888899999988999


Q ss_pred             HHHHHHHhcccchhhHHHhhchHHHHHHHHHHHHhccccceecccchhhHHHHHHHHHHHHHHHH
Q 043160           88 QNLYFTGLKCSTATFTVAMCNILPALTFLMAWIFRLEKVKIKSMRSQAKILGTIVTAGGAMCMTL  152 (333)
Q Consensus        88 ~~~~~~al~~~~~~~~~~l~~~~pi~~~ll~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~  152 (333)
                      +.++++++++.+++.++++..+.|+++++++++++||+++..+      ++|.++.+.|+.+...
T Consensus       227 ~~l~~~~~~~~~~~~~s~~~~l~Pi~a~i~~~~~l~E~~t~~~------iiG~~lIi~gv~~~~~  285 (292)
T PRK11272        227 ISAYMYLLRNVRPALATSYAYVNPVVAVLLGTGLGGETLSPIE------WLALGVIVFAVVLVTL  285 (292)
T ss_pred             HHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHH------HHHHHHHHHHHHHHHH
Confidence            9999999999999999999999999999999999999999998      9999999999999763

>PLN00411 nodulin MtN21 family protein; Provisional

Probab=99.20  E-value=1.2e-09  Score=99.37  Aligned_cols=137  Identities=9%  Similarity=0.097  Sum_probs=104.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhcCCCH-HHHHHHHHHHHHHHHHHHHHHHhhcCC----CCCCHHHHHHHHHHHHHH
Q 043160            9 KPYLGVIFMQFCSSIMSIITKIALTQGMSQ-HVLVAYRMVVATSLIAPFAIVLERKTR----PKMTFRIFAKIALLGLFE   83 (333)
Q Consensus         9 ~~~l~~~~~~~~~~~~~~~~k~~l~~~~~~-~~~~~~r~~~~~~~l~~~~~~~~~~~~----~~~~~~~~~~~~~~g~~~   83 (333)
                      .|.++++.++++|+...+..|... +..++ ...+++...++.+.+.+.....++...    ...+.. ...++..++. 
T Consensus       189 lG~~l~l~aa~~wa~~~il~~~~~-~~~~~~~~~t~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~-~~~i~y~~i~-  265 (358)
T PLN00411        189 IGGALLTIQGIFVSVSFILQAHIM-SEYPAAFTVSFLYTVCVSIVTSMIGLVVEKNNPSVWIIHFDIT-LITIVTMAII-  265 (358)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHH-HHcCcHhHHHHHHHHHHHHHHHHHHHHHccCCcccceeccchH-HHHHHHHHHH-
Confidence            478899999999999999999884 44544 455666666666666555544333211    111222 2234445555 


Q ss_pred             HHHHHHHHHHHhcccchhhHHHhhchHHHHHHHHHHHHhccccceecccchhhHHHHHHHHHHHHHHHHhc
Q 043160           84 PVIGQNLYFTGLKCSTATFTVAMCNILPALTFLMAWIFRLEKVKIKSMRSQAKILGTIVTAGGAMCMTLLK  154 (333)
Q Consensus        84 ~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~ll~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~  154 (333)
                      ..+++.++++++++.+++.++++.++.|++++++++++++|+++..+      ++|.++++.|+.++...+
T Consensus       266 t~lay~lw~~~v~~~ga~~as~~~~L~PV~a~llg~l~LgE~lt~~~------~iG~~LIl~Gv~l~~~~~  330 (358)
T PLN00411        266 TSVYYVIHSWTVRHKGPLYLAIFKPLSILIAVVMGAIFLNDSLYLGC------LIGGILITLGFYAVMWGK  330 (358)
T ss_pred             HHHHHHHHHHHHhccCchHHHHHHhHHHHHHHHHHHHHhCCCCcHHH------HHHHHHHHHHHHHHHhhh
Confidence            47789999999999999999999999999999999999999999998      999999999999987543

>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins

Probab=99.20  E-value=2.4e-10  Score=91.71  Aligned_cols=139  Identities=17%  Similarity=0.207  Sum_probs=115.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhhC------CCchHHHHHHHHHHHHHHHHHHHhhccCCccceee-------c-cchh
Q 043160          186 GALMIAAGCFSWSCFIILEAFLLKSY------PAELSLTALMCFVSSVEGTILALAIERGNTGIWLL-------H-FDAK  251 (333)
Q Consensus       186 G~~~~l~a~~~~a~~~v~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~-~~~~  251 (333)
                      |.++++.+.++.+++.++.|+..++.      .++.....+....+.+.+.|.....|+........       . ....
T Consensus         1 G~~~~l~s~~~~al~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~   80 (153)
T PF03151_consen    1 GFILALASSLFSALRNVLIKKLLKKVSSNSKKLNPLNLLYYNSPISFIILLPLAFLLEGPQLSSFFSEIFGEELSSDPNF   80 (153)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHhhhhhhcchHHH
Confidence            67899999999999999999988872      36889999999999999999988877522111110       0 2244


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhcCceeeeeccchhHHHHHHHHHHHhccccchhhhHHHHHHHhhhhhhee
Q 043160          252 LLSVLYGGFVSCTAYFIMGWLMKRKGPVFVSSFNPLSMVIIAILGSFFIAEELFLGRIVGAIVIVIGLYMVLW  324 (333)
Q Consensus       252 ~~~l~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~~~~~~  324 (333)
                      +..++..|++........+..+++.+|...++.+.++.+...+.+++++||++|+.++.|.++.+.|.+++.+
T Consensus        81 ~~~~~~~~~~~~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~~~~G~~l~~~G~~~Ysy  153 (153)
T PF03151_consen   81 IFLLILSGLLAFLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPLQIIGIVLALVGVLLYSY  153 (153)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHHHHHHHHHHHHHHheeeC
Confidence            5556666666888899999999999999999999999999999999999999999999999999999988764

O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.

>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]

Probab=99.18  E-value=1.9e-11  Score=102.47  Aligned_cols=271  Identities=13%  Similarity=0.075  Sum_probs=194.8

Q ss_pred             HHHHHHHhcC----CCHHHHHHHHHHHHHHHHHHHHHHHhhc----CCC--CCCHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 043160           26 IITKIALTQG----MSQHVLVAYRMVVATSLIAPFAIVLERK----TRP--KMTFRIFAKIALLGLFEPVIGQNLYFTGL   95 (333)
Q Consensus        26 ~~~k~~l~~~----~~~~~~~~~r~~~~~~~l~~~~~~~~~~----~~~--~~~~~~~~~~~~~g~~~~~~~~~~~~~al   95 (333)
                      ...|+.++..    =.|...+++++++...+...+.....+-    ..|  +++.+..+.+...++.- .+...+-++++
T Consensus        45 f~nk~llss~~~~Ld~plf~t~~qcLvt~~~c~~ls~ls~k~~~~ftfp~~~ldl~t~r~vlplsvVf-i~mI~fnnlcL  123 (347)
T KOG1442|consen   45 FLNKHLLSSLVVILDAPLFITWYQCLVTTSICLVLSSLSVKYPGLFTFPSLQLDLATARQVLPLSVVF-ILMISFNNLCL  123 (347)
T ss_pred             hhHHHHhhchhhhcCcHHHHHHHHHHHHHHHHHHHHHHHhhccceeccCcccccHHHHHhhcchhhee-eeehhccceeh
Confidence            3456665331    2478888899988877766555433322    122  24455566667777766 66677778899


Q ss_pred             cccchhhHHHhhchHHHHHHHHHHHHhccccceecccchhhHHHHHHHHHHHHHHHHhcCCcccCCchhhhhhcccCCCC
Q 043160           96 KCSTATFTVAMCNILPALTFLMAWIFRLEKVKIKSMRSQAKILGTIVTAGGAMCMTLLKGPILEFPWKQVRILHNQSETG  175 (333)
Q Consensus        96 ~~~~~~~~~~l~~~~pi~~~ll~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~  175 (333)
                      +|++++...+-.++..+|++++++.++|+|-+...      ..+..+++.|-.+     |-+         .|.      
T Consensus       124 ~yVgVaFYyvgRsLttvFtVlLtyvllkqkTs~~~------~~~C~lIi~GF~l-----Gvd---------qE~------  177 (347)
T KOG1442|consen  124 KYVGVAFYYVGRSLTTVFTVLLTYVLLKQKTSFFA------LGCCLLIILGFGL-----GVD---------QEG------  177 (347)
T ss_pred             hhcceEEEEeccchhhhHHHHhHHhhccccccccc------ceeehhheehhee-----ccc---------ccc------
Confidence            99999999999999999999999999999998875      5555554444433     111         100      


Q ss_pred             CCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhCCC-chHHHHHHHHHHHHHHHHHHHhhccCCcccee---eccchh
Q 043160          176 THNKEEHITKGALMIAAGCFSWSCFIILEAFLLKSYPA-ELSLTALMCFVSSVEGTILALAIERGNTGIWL---LHFDAK  251 (333)
Q Consensus       176 ~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~  251 (333)
                       ... .-.+.|.++++.++++-|+..+..||......+ -...++++...+.+.++|...+..+ -...+.   .+....
T Consensus       178 -~~~-~ls~~GvifGVlaSl~vAlnaiytkk~l~~v~~~iw~lt~ynnv~a~lLflpll~lnge-~~~v~~~~~l~a~~F  254 (347)
T KOG1442|consen  178 -STG-TLSWIGVIFGVLASLAVALNAIYTKKVLPPVGDCIWRLTAYNNVNALLLFLPLLILNGE-FQAVVGFPHLPAIKF  254 (347)
T ss_pred             -ccC-ccchhhhHHHHHHHHHHHHHHHhhheecccccCeehhhHHHHHHHHHHHHHHHHHHcch-HHHHcCcccchHHHH
Confidence             123 456799999999999999999999987666554 4678889999999999999876442 111121   223345


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhcCceeeeeccchhHHHHHHHHHHHhccccchhhhHHHHHHHhhhhhheecC
Q 043160          252 LLSVLYGGFVSCTAYFIMGWLMKRKGPVFVSSFNPLSMVIIAILGSFFIAEELFLGRIVGAIVIVIGLYMVLWGR  326 (333)
Q Consensus       252 ~~~l~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~~~~~~~~  326 (333)
                      |..+...|++++.-.+.-.+=+|-.+|....+-..-.-..-.+++..+++|.-+...|-|-.+++.|...+++-|
T Consensus       255 w~~mtLsglfgF~mgyvTg~QIK~TSplThnISgTAka~aQTvlAv~~y~E~ks~lwwtsn~~vLvgs~~YT~vk  329 (347)
T KOG1442|consen  255 WILMTLSGLFGFAMGYVTGWQIKVTSPLTHNISGTAKAAAQTVLAVAYYSETKSGLWWTSNIVVLVGSLAYTLVK  329 (347)
T ss_pred             HHHHHHHHHHHHHhhheeeEEEEecccceeeecHhHHHHHHHHHHHHHHHHHhhhheeeeeEEEEehhHHHHHHH
Confidence            666666666644444444455677899899988888999999999999999999999999999999988887544

>KOG1583 consensus UDP-N-acetylglucosamine transporter [Carbohydrate transport and metabolism]

Probab=99.17  E-value=6.1e-10  Score=93.70  Aligned_cols=268  Identities=10%  Similarity=0.076  Sum_probs=175.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccc-chhhHHHhhchHHHHHHHH
Q 043160           39 HVLVAYRMVVATSLIAPFAIVLERKTRPKMTFRIFAKIALLGLFEPVIGQNLYFTGLKCS-TATFTVAMCNILPALTFLM  117 (333)
Q Consensus        39 ~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~-~~~~~~~l~~~~pi~~~ll  117 (333)
                      ...++.++++.+.--+++.--.. ..+++.+.+++.....   .. ...+.+-++++++- +...=.++.+-.++.+.++
T Consensus        34 NLITFaqFlFia~eGlif~skf~-~~k~kiplk~Y~i~V~---mF-F~vnv~NN~al~f~I~~PlHiIfRsgsll~nM~~  108 (330)
T KOG1583|consen   34 NLITFAQFLFIATEGLIFTSKFF-TVKPKIPLKDYAITVA---MF-FIVNVTNNYALKFNIPMPLHIIFRSGSLLANMIL  108 (330)
T ss_pred             eehHHHHHHHHHHhceeeecccc-ccCCCCchhhhheehh---ee-eeeeeeccceeeecccceEEEEEecCcHHHHHHH
Confidence            45556666555554444321111 1235666665543332   22 44567777888763 4444456678899999999


Q ss_pred             HHHHhccccceecccchhhHHHHHHHHHHHHHHHHhcCCcccCCchhhhhhcccCCCCCCCcchhhHHHHHHHHHHHHHH
Q 043160          118 AWIFRLEKVKIKSMRSQAKILGTIVTAGGAMCMTLLKGPILEFPWKQVRILHNQSETGTHNKEEHITKGALMIAAGCFSW  197 (333)
Q Consensus       118 ~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~  197 (333)
                      ++++.|.|-+.+|      ..++.+.-+|+++.++...++...     ..+.-+.++..++. ..+..|+.+...+.+..
T Consensus       109 g~il~~k~Ys~~Q------y~Sv~~iTiGiiIcTl~s~~d~~~-----~~~~l~~~~~~~~~-~~w~iGi~lL~~al~~s  176 (330)
T KOG1583|consen  109 GWILLGKRYSLRQ------YSSVLMITIGIIICTLFSSKDGRS-----KLSGLDSGSAQSDF-FWWLIGIALLVFALLLS  176 (330)
T ss_pred             HHHhccceeehhh------hhhHHhhhhhheeEEeecCcchhh-----hhcccccCcccccc-hHHHHHHHHHHHHHHHH
Confidence            9999998888886      999999999999998766543221     01111111222344 66789999999999999


Q ss_pred             HHHHHHHHHHhhhCC-CchHHHHHHHHHHHHHHHHHHHhhc-------cCC---ccceeeccchhHHHHHHHHHHHHHHH
Q 043160          198 SCFIILEAFLLKSYP-AELSLTALMCFVSSVEGTILALAIE-------RGN---TGIWLLHFDAKLLSVLYGGFVSCTAY  266 (333)
Q Consensus       198 a~~~v~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~---~~~~~~~~~~~~~~l~~~~~~~~~~~  266 (333)
                      |.-.+.++..-++++ ++.+..++........++...--..       ..+   .+.....-+..|..+....+....+.
T Consensus       177 a~mgiyqE~~Y~kyGKh~~EalFytH~LsLP~Flf~~~div~~~~~~~~se~~~~p~~g~~vP~~~~yLl~n~L~Qy~Ci  256 (330)
T KOG1583|consen  177 AYMGIYQETTYQKYGKHWKEALFYTHFLSLPLFLFMGDDIVSHWRLAFKSESYLIPLLGFKVPSMWVYLLFNVLTQYFCI  256 (330)
T ss_pred             HHHHHHHHHHHHHhcCChHHHHHHHHHhccchHHHhcchHHHHHHHHhcCcceeccccCccccHHHHHHHHHHHHHHHHH
Confidence            999999988888876 5677888888777665544321100       000   00010111234544443222233333


Q ss_pred             HHHHHHHhhcCceeeeeccchhHHHHHHHHHHHhccccchhhhHHHHHHHhhhhhhe
Q 043160          267 FIMGWLMKRKGPVFVSSFNPLSMVIIAILGSFFIAEELFLGRIVGAIVIVIGLYMVL  323 (333)
Q Consensus       267 ~~~~~a~~~~~~~~~~~~~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~~~~~  323 (333)
                      --.+.-..+.++..+++...++-.++.+++.+.|+..+++.-|+|.+++..|..++.
T Consensus       257 kgVy~L~te~~sLTVTlvltlRKFvSLl~SiiyF~Npft~~h~lGa~lVF~Gt~~fa  313 (330)
T KOG1583|consen  257 KGVYILTTETSSLTVTLVLTLRKFVSLLFSIIYFENPFTPWHWLGAALVFFGTLLFA  313 (330)
T ss_pred             HhhhhhhceecceEEEEeeeHHHHHHHhheeeEecCCCCHHHHHHHHHHHHHHHHHH
Confidence            334444566778899999999999999999999999999999999999999977765

>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein

Probab=99.15  E-value=7.5e-10  Score=98.14  Aligned_cols=134  Identities=12%  Similarity=0.078  Sum_probs=102.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhhCCCchHHHHHHHHHHHHHHHHHHHhhccCCccceeeccchhHHHHHHHHHHHHHHH
Q 043160          187 ALMIAAGCFSWSCFIILEAFLLKSYPAELSLTALMCFVSSVEGTILALAIERGNTGIWLLHFDAKLLSVLYGGFVSCTAY  266 (333)
Q Consensus       187 ~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~  266 (333)
                      ..+.+.++++|+...+..|+..++. ++  ...+......+...|......  ....++.+....+..+...++.....+
T Consensus         3 ~~~~~~aa~~~a~~~~~~k~~~~~~-~~--~~~~~~~~~~~~l~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~   77 (281)
T TIGR03340         3 LTLVVFSALMHAGWNLMAKSHADKE-PD--FLWWALLAHSVLLTPYGLWYL--AQVGWSRLPATFWLLLAISAVANMVYF   77 (281)
T ss_pred             HHHHHHHHHHHHHHHHHHhhcCCch-hH--HHHHHHHHHHHHHHHHHHHhc--ccCCCCCcchhhHHHHHHHHHHHHHHH
Confidence            4678999999999999999877764 23  345555666667777665321  112232223233444444444488999


Q ss_pred             HHHHHHHhhcCceeeeeccchhHHHHHHHHHHHhccccchhhhHHHHHHHhhhhhheec
Q 043160          267 FIMGWLMKRKGPVFVSSFNPLSMVIIAILGSFFIAEELFLGRIVGAIVIVIGLYMVLWG  325 (333)
Q Consensus       267 ~~~~~a~~~~~~~~~~~~~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~~~~~~~  325 (333)
                      .++++++++.+++.++++.+++|+++.+++++++||+++..+++|.+++++|+++...+
T Consensus        78 ~~~~~a~~~~~~~~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~g~~~~~~Gv~ll~~~  136 (281)
T TIGR03340        78 LGLAQAYHHADVGLVYPLARSSPLLVAIWATLTLGETLSPLAWLGILIITLGLLVLGLS  136 (281)
T ss_pred             HHHHHHHhcCChhhhhhHHhhhHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhcc
Confidence            99999999999999999999999999999999999999999999999999999887654

This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.

>PRK11689 aromatic amino acid exporter; Provisional

Probab=99.12  E-value=2.5e-09  Score=95.47  Aligned_cols=133  Identities=12%  Similarity=0.099  Sum_probs=104.3

Q ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHH
Q 043160            8 AKPYLGVIFMQFCSSIMSIITKIALTQGMSQHVLVAYRMVVATSLIAPFAIVLERKTRPKMTFRIFAKIALLGLFEPVIG   87 (333)
Q Consensus         8 ~~~~l~~~~~~~~~~~~~~~~k~~l~~~~~~~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~   87 (333)
                      ..|.++++.++++|+...+..|.. .++.++.....   ......+.+...... ......+.+.+......++. ..++
T Consensus       155 ~~G~~~~l~aa~~~A~~~v~~k~~-~~~~~~~~~~~---~~~~~~l~~~~~~~~-~~~~~~~~~~~~~l~~~~~~-t~~~  228 (295)
T PRK11689        155 PLSYGLAFIGAFIWAAYCNVTRKY-ARGKNGITLFF---ILTALALWIKYFLSP-QPAMVFSLPAIIKLLLAAAA-MGFG  228 (295)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHhhc-cCCCCchhHHH---HHHHHHHHHHHHHhc-CccccCCHHHHHHHHHHHHH-HHHH
Confidence            458899999999999999999998 56677765432   233333333222222 11123456667777777754 5899


Q ss_pred             HHHHHHHhcccchhhHHHhhchHHHHHHHHHHHHhccccceecccchhhHHHHHHHHHHHHHHHH
Q 043160           88 QNLYFTGLKCSTATFTVAMCNILPALTFLMAWIFRLEKVKIKSMRSQAKILGTIVTAGGAMCMTL  152 (333)
Q Consensus        88 ~~~~~~al~~~~~~~~~~l~~~~pi~~~ll~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~  152 (333)
                      +.++++++++.+++.++.+.++.|++..+++++++||+++..+      ++|.++++.|+.+...
T Consensus       229 ~~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~~~lgE~~~~~~------~iG~~lI~~gv~~~~~  287 (295)
T PRK11689        229 YAAWNVGILHGNMTLLATASYFTPVLSAALAALLLSTPLSFSF------WQGVAMVTAGSLLCWL  287 (295)
T ss_pred             HHHHHHHHHccCHHHHHHHHHhHHHHHHHHHHHHhCCCCcHHH------HHHHHHHHHhHHHHhh
Confidence            9999999999999999999999999999999999999999998      9999999999988763

>PRK15430 putative chloramphenical resistance permease RarD; Provisional

Probab=99.08  E-value=1.4e-09  Score=97.17  Aligned_cols=139  Identities=14%  Similarity=0.177  Sum_probs=109.2

Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCchHHHHHHHHHHHHHHHHHHHhhccCCcccee--eccchhHHHHHHH
Q 043160          181 EHITKGALMIAAGCFSWSCFIILEAFLLKSYPAELSLTALMCFVSSVEGTILALAIERGNTGIWL--LHFDAKLLSVLYG  258 (333)
Q Consensus       181 ~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~~  258 (333)
                      ++...|.++.+.++++|+...+..|.. .+. +|....++++.++.+.+.+......  +.....  ..+...+... ..
T Consensus         4 ~~~~~g~~~~l~a~~~wg~~~~~~k~~-~~~-~~~~~~~~R~~~a~~~l~~~~~~~~--~~~~~~~~~~~~~~~~~~-~~   78 (296)
T PRK15430          4 KQTRQGVLLALAAYFIWGIAPAYFKLI-YYV-PADEILTHRVIWSFFFMVVLMSICR--QWSYLKTLIQTPQKIFML-AV   78 (296)
T ss_pred             hhhhhHHHHHHHHHHHHHHHHHHHHHh-cCC-CHHHHHHHHHHHHHHHHHHHHHHHc--cHHHHHHHHcCHHHHHHH-HH
Confidence            455689999999999999999999764 444 5789999999999887776654322  111110  0011222222 34


Q ss_pred             HHH-HHHHHHHHHHHHhhcCceeeeeccchhHHHHHHHHHHHhccccchhhhHHHHHHHhhhhhhee
Q 043160          259 GFV-SCTAYFIMGWLMKRKGPVFVSSFNPLSMVIIAILGSFFIAEELFLGRIVGAIVIVIGLYMVLW  324 (333)
Q Consensus       259 ~~~-~~~~~~~~~~a~~~~~~~~~~~~~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~~~~~~  324 (333)
                      +.+ .+..+.++++++++.+++.++.+.++.|++..++++++++|+++..+++|+++.++|+.+...
T Consensus        79 ~~~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E~~~~~~~~g~~l~~~Gv~li~~  145 (296)
T PRK15430         79 SAVLIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGERFRRMQWLAVILAICGVLVQLW  145 (296)
T ss_pred             HHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHH
Confidence            555 888899999999999999999999999999999999999999999999999999999887653

>TIGR00803 nst UDP-galactose transporter

Probab=99.04  E-value=8.9e-10  Score=94.15  Aligned_cols=215  Identities=14%  Similarity=0.086  Sum_probs=132.8

Q ss_pred             chhhHHHhhchHHHHHHHHHHHHhccccceecccchhhHHHHHHHHHHHHHHHHhcCCcccCC--chhhhhhc-ccCCCC
Q 043160           99 TATFTVAMCNILPALTFLMAWIFRLEKVKIKSMRSQAKILGTIVTAGGAMCMTLLKGPILEFP--WKQVRILH-NQSETG  175 (333)
Q Consensus        99 ~~~~~~~l~~~~pi~~~ll~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~--~~~~~~~~-~~~~~~  175 (333)
                      +........+..++++++.++...+||.+..+      +++.++...|++...+.+.+.....  ..+....+ .++...
T Consensus         3 svPa~~~~~s~~l~~v~l~~~~~~~~~~~~~~------i~~~~l~~~g~l~~~ls~~q~~al~~l~~~~~~~~~~~~~~~   76 (222)
T TIGR00803         3 SVPIHIIFKQNNLVLIALGNLLAAGKQVTQLK------ILSTALMTLGSLVASLGDDQWFSLKLLKLGVAIVQMVQSSAK   76 (222)
T ss_pred             cccchHHHHhcchHHHHHhcccccceeeehHH------HHHHHHHHHHHHHhHhhHHHHHHHHHHHHhHeeeecCCCCcc
Confidence            34455667888999999999999999988664      9999999999987554332110000  00000000 000001


Q ss_pred             CCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCchHHHHHHHHHHHHHHHHHHHhhccCCc-cceeeccchhHHH
Q 043160          176 THNKEEHITKGALMIAAGCFSWSCFIILEAFLLKSYPAELSLTALMCFVSSVEGTILALAIERGNT-GIWLLHFDAKLLS  254 (333)
Q Consensus       176 ~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~  254 (333)
                      .... ++...|....+.+.++-++..+.+++..|+.+............-.+..........+.+. ......  ..+..
T Consensus        77 ~~~~-g~~~~g~~~~l~a~~~~~~~~~y~e~~~k~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~  153 (222)
T TIGR00803        77 TLMF-GNPVVGLSAVLSALLSSGFAGVYFEKILKDGDTMFWSRNLQLPLFGLFSTFSVLLWSDGTLISNFGFF--IGYPT  153 (222)
T ss_pred             cccc-ccHHHHHHHHHHHHHHHhhhHHHHHHcccCCCCchHHHHHHHHHHHHHHHHHHHhhcccchhhccCcc--cCCch
Confidence            1223 4556788888888888888889988876654322222222221111111111111111011 111100  11111


Q ss_pred             -HHHHHHHHHHHHHHHHHHHhhcCceeeeeccchhHHHHHHHHHHHhccccchhhhHHHHHHHhhhhhh
Q 043160          255 -VLYGGFVSCTAYFIMGWLMKRKGPVFVSSFNPLSMVIIAILGSFFIAEELFLGRIVGAIVIVIGLYMV  322 (333)
Q Consensus       255 -l~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~~~~  322 (333)
                       .....+....+..+..+.+|+.++...+....++++++.+++++++||+++..++.|+.+++.|++++
T Consensus       154 ~~~~~~~~~a~~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~~~~~g~~lV~~~~~lY  222 (222)
T TIGR00803       154 AVWIVGLLNVGGGLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISSTFYLGAILVFLATFLY  222 (222)
T ss_pred             HHHHHHHHHHhcCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHeeeEeC
Confidence             22223337777888999999999999999999999999999999999999999999999999997753

NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.

>TIGR00688 rarD rarD protein

Probab=99.04  E-value=2.5e-09  Score=93.45  Aligned_cols=138  Identities=14%  Similarity=0.173  Sum_probs=108.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhhCCCchHHHHHHHHHHHHHHHHHHHhhccCCc--cceeeccch-hHHHHHHHHHH
Q 043160          185 KGALMIAAGCFSWSCFIILEAFLLKSYPAELSLTALMCFVSSVEGTILALAIERGNT--GIWLLHFDA-KLLSVLYGGFV  261 (333)
Q Consensus       185 ~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~-~~~~l~~~~~~  261 (333)
                      .|..+.+.++++|+...+..|. ..+. +|.+..++++..+.+.+.+......+...  ...+..... .+..+...|++
T Consensus         2 ~g~~~~i~a~~~wg~~~~~~k~-~~~~-~~~~i~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~   79 (256)
T TIGR00688         2 KGIIVSLLASFLFGYMYYYSKL-LKPL-PATDILGHRMIWSFPFMLLSVTLFRQWAALIERLKRIQKRPLILSLLLCGLL   79 (256)
T ss_pred             CcHHHHHHHHHHHHHHHHHHHH-hccC-CHHHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHhCcccchHHHHHHHHHHH
Confidence            4788999999999999999997 4444 68999999999998777666543321010  111111112 23445566666


Q ss_pred             HHHHHHHHHHHHhhcCceeeeeccchhHHHHHHHHHHHhccccchhhhHHHHHHHhhhhhhee
Q 043160          262 SCTAYFIMGWLMKRKGPVFVSSFNPLSMVIIAILGSFFIAEELFLGRIVGAIVIVIGLYMVLW  324 (333)
Q Consensus       262 ~~~~~~~~~~a~~~~~~~~~~~~~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~~~~~~  324 (333)
                      ....+.++++++++.+++.++.+.++.|+++.++++++++|+++..+++|.++.++|+.+...
T Consensus        80 ~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~~~l~~~~~~~Gv~li~~  142 (256)
T TIGR00688        80 IGFNWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVFLKERISRFQFIAVIIATLGVISNIV  142 (256)
T ss_pred             HHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHH
Confidence            888999999999999999999999999999999999999999999999999999999887643

This uncharacterized protein is predicted to have many membrane-spanning domains.

>PRK11453 O-acetylserine/cysteine export protein; Provisional

Probab=99.02  E-value=1.7e-08  Score=90.23  Aligned_cols=137  Identities=12%  Similarity=0.160  Sum_probs=106.5

Q ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHHhcCCC---HHHHHHHHHHHHHHHHHHHHHHHhhcC-----CCCCCHHHHHHHHHH
Q 043160            8 AKPYLGVIFMQFCSSIMSIITKIALTQGMS---QHVLVAYRMVVATSLIAPFAIVLERKT-----RPKMTFRIFAKIALL   79 (333)
Q Consensus         8 ~~~~l~~~~~~~~~~~~~~~~k~~l~~~~~---~~~~~~~r~~~~~~~l~~~~~~~~~~~-----~~~~~~~~~~~~~~~   79 (333)
                      ..|.++++.++++|+...+..|... +..+   ......+-...+.+.+.......+...     ....+.+.+..++..
T Consensus       142 ~~G~~l~l~aal~~a~~~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  220 (299)
T PRK11453        142 MLGFMLTLAAAFSWACGNIFNKKIM-SHSTRPAVMSLVVWSALIPIIPFFVASLILDGSATMIHSLVTIDMTTILSLMYL  220 (299)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHh-cccCccchhHHHHHHHHHHHHHHHHHHHHhcCchhhhhhhccCCHHHHHHHHHH
Confidence            3699999999999999999999973 3332   223334444444333332222222211     123456778889999


Q ss_pred             HHHHHHHHHHHHHHHhcccchhhHHHhhchHHHHHHHHHHHHhccccceecccchhhHHHHHHHHHHHHHHH
Q 043160           80 GLFEPVIGQNLYFTGLKCSTATFTVAMCNILPALTFLMAWIFRLEKVKIKSMRSQAKILGTIVTAGGAMCMT  151 (333)
Q Consensus        80 g~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~ll~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~  151 (333)
                      +++.++.++.++++++++.++++++.+..+.|++..+++++++||+++..+      ++|.+++++|+.+..
T Consensus       221 ~i~~t~~~~~l~~~~l~~~~a~~~s~~~~l~Pv~a~~~~~l~lgE~~~~~~------~iG~~lI~~gv~l~~  286 (299)
T PRK11453        221 AFVATIVGYGIWGTLLGRYETWRVAPLSLLVPVVGLASAALLLDERLTGLQ------FLGAVLIMAGLYINV  286 (299)
T ss_pred             HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhCCCccHHH------HHHHHHHHHHHHHHh
Confidence            999999999999999999999999999999999999999999999999998      999999999998865

>KOG1582 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=98.96  E-value=2.3e-08  Score=84.14  Aligned_cols=225  Identities=10%  Similarity=0.115  Sum_probs=169.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcccchhhHHHhhchHHHHHHHHHHHHhccccceecccchhhHHHHHHHHHHHHHHHH
Q 043160           73 FAKIALLGLFEPVIGQNLYFTGLKCSTATFTVAMCNILPALTFLMAWIFRLEKVKIKSMRSQAKILGTIVTAGGAMCMTL  152 (333)
Q Consensus        73 ~~~~~~~g~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~ll~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~  152 (333)
                      |+-...++.+. ...+.+...++.|++-..-.++..+.-+=+.+.+.++-|.|-+..+      .++..+...|.++.++
T Consensus       106 ~rtY~~la~~t-~gtmGLsn~SlgYLNYPtQviFKccKliPVmiggifIqGkRY~v~d------~~aA~lm~lGli~FTL  178 (367)
T KOG1582|consen  106 WRTYVILAFLT-VGTMGLSNGSLGYLNYPTQVIFKCCKLIPVMIGGIFIQGKRYGVHD------YIAAMLMSLGLIWFTL  178 (367)
T ss_pred             hhHhhhhHhhh-hhccccCcCccccccCcHHHHHHhhhhhhhhheeeeeccccccHHH------HHHHHHHHHHHHhhhh
Confidence            34445555555 6677788888888888888888888888888899999888877776      9999999999999986


Q ss_pred             hcCCcccCCchhhhhhcccCCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhCC-CchHHHHHHHHHHHHHHHH
Q 043160          153 LKGPILEFPWKQVRILHNQSETGTHNKEEHITKGALMIAAGCFSWSCFIILEAFLLKSYP-AELSLTALMCFVSSVEGTI  231 (333)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~  231 (333)
                      .+..                    ..+ .....|..+.-.+-++-|+-.-.+.+..+.++ +.....++...++.+.+..
T Consensus       179 ADs~--------------------~sP-NF~~~Gv~mIsgALl~DA~iGNvQEk~m~~~~~ss~EmvfySy~iG~vflf~  237 (367)
T KOG1582|consen  179 ADSQ--------------------TSP-NFNLIGVMMISGALLADAVIGNVQEKAMKMNPASSSEMVFYSYGIGFVFLFA  237 (367)
T ss_pred             cccc--------------------cCC-CcceeeHHHHHHHHHHHHHhhHHHHHHHhhCCCCcceEEEeeecccHHHHHH
Confidence            5431                    123 44568888888888888887777888888776 3456677777888777666


Q ss_pred             HHHhhccCCccceeeccc---hhHHHHHHHHHHHHHHHHHHHHHHhhcCceeeeeccchhHHHHHHHHHHHhccccchhh
Q 043160          232 LALAIERGNTGIWLLHFD---AKLLSVLYGGFVSCTAYFIMGWLMKRKGPVFVSSFNPLSMVIIAILGSFFIAEELFLGR  308 (333)
Q Consensus       232 ~~~~~~~~~~~~~~~~~~---~~~~~l~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~pv~~~~~~~~~~~e~~~~~~  308 (333)
                      ......+ -.+.|..-..   ..+....+.+..+.++......-++..++.....+...+--+++++++++|..++|...
T Consensus       238 ~mvlTge-~f~a~~fcaehp~~tyGy~~~~s~~gylG~~~VLalI~~fGA~~aatvTTaRKavTi~lSfllFsKPfT~qy  316 (367)
T KOG1582|consen  238 PMVLTGE-LFSAWTFCAEHPVRTYGYAFLFSLAGYLGIVFVLALIKLFGALIAATVTTARKAVTILLSFLLFSKPFTEQY  316 (367)
T ss_pred             HHHhccc-chhhhHHHHhCcHhHHHHHHHHHHHhHhhHHHHHHHHHHhchhHHHHHHHhHhHHHHHHHHHHHcCchHHHH
Confidence            6654433 3444432111   23344444444466777777777888999999999999999999999999999999999


Q ss_pred             hHHHHHHHhhhhhheecC
Q 043160          309 IVGAIVIVIGLYMVLWGR  326 (333)
Q Consensus       309 ~~G~~li~~g~~~~~~~~  326 (333)
                      .-|..+++.|+++....+
T Consensus       317 ~~~gllv~lgI~Ln~ysk  334 (367)
T KOG1582|consen  317 VWSGLLVVLGIYLNMYSK  334 (367)
T ss_pred             hhhhHHHHHHHHhhcccC
Confidence            999999999999988776

>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator

Probab=98.91  E-value=1.5e-08  Score=90.83  Aligned_cols=138  Identities=14%  Similarity=0.119  Sum_probs=106.8

Q ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHHhc--CCCHHHHHHHHHHHHHHHHHHHHHHHhhcCCCC---------CCHHHHHH-
Q 043160            8 AKPYLGVIFMQFCSSIMSIITKIALTQ--GMSQHVLVAYRMVVATSLIAPFAIVLERKTRPK---------MTFRIFAK-   75 (333)
Q Consensus         8 ~~~~l~~~~~~~~~~~~~~~~k~~l~~--~~~~~~~~~~r~~~~~~~l~~~~~~~~~~~~~~---------~~~~~~~~-   75 (333)
                      ..|.+++++++++|+...+..|... +  +.+|.....+.+..+.+.+.|+....+......         ........ 
T Consensus       144 ~~G~~~~l~a~~~~a~~~v~~k~~~-~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (302)
T TIGR00817       144 WAGFLSAMISNITFVSRNIFSKKAM-TIKSLDKTNLYAYISIMSLFLLSPPAFITEGPPFLPHGFMQAISGVNVTKIYTV  222 (302)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhh-ccCCCCcccHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHhhcccCchHHHHH
Confidence            4599999999999999999999984 5  689999999999999999998876543211000         00011111 


Q ss_pred             HHHHHHHHHHHHHHHHHHHhcccchhhHHHhhchHHHHHHHHHHHHhccccceecccchhhHHHHHHHHHHHHHHHH
Q 043160           76 IALLGLFEPVIGQNLYFTGLKCSTATFTVAMCNILPALTFLMAWIFRLEKVKIKSMRSQAKILGTIVTAGGAMCMTL  152 (333)
Q Consensus        76 ~~~~g~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~ll~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~  152 (333)
                      ....+.......+.++++++++++++.+++.....|+++.+++++++||+++..+      ++|.++++.|+.+...
T Consensus       223 ~~~~~~~~~~~~~~~~~~~l~~~sa~t~sv~~~l~pv~~~~~~~~~lge~lt~~~------~~G~~lil~Gv~l~~~  293 (302)
T TIGR00817       223 SLVAAMGFFHFYQQVAFMLLGRVSPLTHSVGNCMKRVVVIVVSILFFGTKISPQQ------VFGTGIAIAGVFLYSR  293 (302)
T ss_pred             HHHHHHHHHHHHHHHHHHHHccCCchHHHHHhhhhhhheeeeehhhcCCCCchhH------HHHHHHHHHHHHHHHH
Confidence            2233332323444677789999999999999999999999999999999999998      9999999999999763

specificities overlap.

>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional

Probab=98.89  E-value=3.7e-08  Score=75.95  Aligned_cols=123  Identities=15%  Similarity=0.153  Sum_probs=93.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhhCCCchHHHHHHHHHHHHHHHHHHHhhccCCccceeeccchhHHHHHHHHHH-HH
Q 043160          185 KGALMIAAGCFSWSCFIILEAFLLKSYPAELSLTALMCFVSSVEGTILALAIERGNTGIWLLHFDAKLLSVLYGGFV-SC  263 (333)
Q Consensus       185 ~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~  263 (333)
                      .|.++.+.+.++-+...++-|+..++.++ ...... .    . ..... .  .           . ....+++|++ ..
T Consensus         2 ~~~~~i~~sv~l~~~gQl~~K~g~~~~g~-~~~~~~-~----~-~~~~~-~--~-----------~-p~~~i~lgl~~~~   59 (129)
T PRK02971          2 MGYLWGLASVLLASVAQLSLKWGMSRLPL-LSHAWD-F----I-AALLA-F--G-----------L-ALRAVLLGLAGYA   59 (129)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHHHhhCCC-ccchhH-H----H-HHHHH-H--h-----------c-cHHHHHHHHHHHH
Confidence            36788889999999999999998887653 211111 0    0 00000 0  0           0 1124567888 99


Q ss_pred             HHHHHHHHHHhhcCceeeeeccchhHHHHHHHHHH--HhccccchhhhHHHHHHHhhhhhheecCCCC
Q 043160          264 TAYFIMGWLMKRKGPVFVSSFNPLSMVIIAILGSF--FIAEELFLGRIVGAIVIVIGLYMVLWGRSKD  329 (333)
Q Consensus       264 ~~~~~~~~a~~~~~~~~~~~~~~~~pv~~~~~~~~--~~~e~~~~~~~~G~~li~~g~~~~~~~~~~~  329 (333)
                      +++.+|.+++++.+++.+.++....++...+.++.  ++||++|+.+++|+++|++|+++..++++|+
T Consensus        60 la~~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls~~~~iGi~lIi~GV~lv~~~~~~~  127 (129)
T PRK02971         60 LSMLCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFSLKKTLGVACIMLGVWLINLPTTKA  127 (129)
T ss_pred             HHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhccCCCCC
Confidence            99999999999999999999999998888888875  8999999999999999999999998766553

>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins

Probab=98.88  E-value=1e-07  Score=76.41  Aligned_cols=133  Identities=17%  Similarity=0.252  Sum_probs=114.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhc------CCCHHHHHHHHHHHHHHHHHHHHHHHhhcCCC----CC-------CHHH
Q 043160           10 PYLGVIFMQFCSSIMSIITKIALTQ------GMSQHVLVAYRMVVATSLIAPFAIVLERKTRP----KM-------TFRI   72 (333)
Q Consensus        10 ~~l~~~~~~~~~~~~~~~~k~~l~~------~~~~~~~~~~r~~~~~~~l~~~~~~~~~~~~~----~~-------~~~~   72 (333)
                      |+++++.+.++.+...+..|..+++      +.++.....+....+.+++.+.....+.....    ..       ..+.
T Consensus         1 G~~~~l~s~~~~al~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~   80 (153)
T PF03151_consen    1 GFILALASSLFSALRNVLIKKLLKKVSSNSKKLNPLNLLYYNSPISFIILLPLAFLLEGPQLSSFFSEIFGEELSSDPNF   80 (153)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHhhhhhhcchHHH
Confidence            5788999999999999999998755      78999999999999999999988876654411    00       2244


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcccchhhHHHhhchHHHHHHHHHHHHhccccceecccchhhHHHHHHHHHHHHH
Q 043160           73 FAKIALLGLFEPVIGQNLYFTGLKCSTATFTVAMCNILPALTFLMAWIFRLEKVKIKSMRSQAKILGTIVTAGGAMC  149 (333)
Q Consensus        73 ~~~~~~~g~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~ll~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l  149 (333)
                      +..+...|++. ...+...+..++++++...++......+.+.++++++++|+++..+      +.|+++++.|+.+
T Consensus        81 ~~~~~~~~~~~-~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~~------~~G~~l~~~G~~~  150 (153)
T PF03151_consen   81 IFLLILSGLLA-FLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPLQ------IIGIVLALVGVLL  150 (153)
T ss_pred             HHHHHHHHHHH-HHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHHH------HHHHHHHHHHHhe
Confidence            56666677777 8899999999999999999999999999999999999999999997      9999999999875

O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.

>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional

Probab=98.76  E-value=2.7e-07  Score=69.38  Aligned_cols=68  Identities=18%  Similarity=0.100  Sum_probs=62.4

Q ss_pred             HHHHHHHHHHHHHHHHHhcccchhhHHHhhchHHHHHHHHHHHHhccccceecccchhhHHHHHHHHHHHHHHH
Q 043160           78 LLGLFEPVIGQNLYFTGLKCSTATFTVAMCNILPALTFLMAWIFRLEKVKIKSMRSQAKILGTIVTAGGAMCMT  151 (333)
Q Consensus        78 ~~g~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~ll~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~  151 (333)
                      ..+.++...+..++.+++++.|.+.+.++.++.++++.+++++++|||+|.++      ++|+.++++|++++.
T Consensus        41 ~~~~~~~~l~~~~~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~ls~~~------~~Gi~lii~Gv~~i~  108 (111)
T PRK15051         41 GLALACLGLAMVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSPRH------WCGVAFIIGGIVILG  108 (111)
T ss_pred             HHHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCCCCHHH------HHHHHHHHHHHHHHh
Confidence            34446668899999999999999999999999999999999999999999997      999999999999875

>PF13536 EmrE: Multidrug resistance efflux transporter

Probab=98.76  E-value=3.1e-08  Score=75.14  Aligned_cols=108  Identities=19%  Similarity=0.304  Sum_probs=80.1

Q ss_pred             HHHHHHHHHHHHHHHhhccCCccceeeccchhHHHHHHHHHH-HHHHHHHHHHHHhhcCceeeeeccchhHHHHHHHHHH
Q 043160          220 LMCFVSSVEGTILALAIERGNTGIWLLHFDAKLLSVLYGGFV-SCTAYFIMGWLMKRKGPVFVSSFNPLSMVIIAILGSF  298 (333)
Q Consensus       220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~a~~~~~~~~~~~~~~~~pv~~~~~~~~  298 (333)
                      ++...+.+..........+ ....++......+......|++ ...++.++.++.++.++ .++++..++|+++.+++++
T Consensus         3 ~r~~~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~~-~v~~i~~~~pi~~~ll~~~   80 (113)
T PF13536_consen    3 FRYLFSVLFLLIILLIRGR-LRDLFRALRRKPWLWLILAGLLGFGVAYLLFFYALSYAPA-LVAAIFSLSPIFTALLSWL   80 (113)
T ss_pred             HHHHHHHHHHHHHHHHHcc-HHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHhCcH-HHHHHHHHHHHHHHHHHHH
Confidence            4445555555555544222 1111221222445556666777 56999999999999995 8889999999999999999


Q ss_pred             HhccccchhhhHHHHHHHhhhhhheecCCCC
Q 043160          299 FIAEELFLGRIVGAIVIVIGLYMVLWGRSKD  329 (333)
Q Consensus       299 ~~~e~~~~~~~~G~~li~~g~~~~~~~~~~~  329 (333)
                      +++|+++..+++|.+++++|++++.+.+.+.
T Consensus        81 ~~~er~~~~~~~a~~l~~~Gv~li~~~~~~~  111 (113)
T PF13536_consen   81 FFKERLSPRRWLAILLILIGVILIAWSDLTG  111 (113)
T ss_pred             HhcCCCCHHHHHHHHHHHHHHHHHhhhhccc
Confidence            9999999999999999999999998876543

>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein

Probab=98.75  E-value=2.3e-07  Score=82.52  Aligned_cols=130  Identities=13%  Similarity=0.122  Sum_probs=102.5

Q ss_pred             ccHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHH---HHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHH
Q 043160            7 HAKPYLGVIFMQFCSSIMSIITKIALTQGMSQHVLVAYRMV---VATSLIAPFAIVLERKTRPKMTFRIFAKIALLGLFE   83 (333)
Q Consensus         7 ~~~~~l~~~~~~~~~~~~~~~~k~~l~~~~~~~~~~~~r~~---~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~   83 (333)
                      ..+|+++.+++++.++......|..   +.+|...++....   ++..++.+..  +  +.++. +.+..+..++.|++.
T Consensus       150 ~~~Gi~~~l~sg~~y~~~~~~~~~~---~~~~~~~~~~~~~g~~~~~~~~~~~~--~--~~~~~-~~~~~~~~~~~Gi~~  221 (290)
T TIGR00776       150 FKKGILLLLMSTIGYLVYVVVAKAF---GVDGLSVLLPQAIGMVIGGIIFNLGH--I--LAKPL-KKYAILLNILPGLMW  221 (290)
T ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHc---CCCcceehhHHHHHHHHHHHHHHHHH--h--cccch-HHHHHHHHHHHHHHH
Confidence            3689999999999999999999976   2788877555444   2333333222  1  11222 233444566688886


Q ss_pred             HHHHHHHHHHHhc-ccchhhHHHhhchHHHHHHHHHHHHhccccceecccchhhH----HHHHHHHHHHHHHH
Q 043160           84 PVIGQNLYFTGLK-CSTATFTVAMCNILPALTFLMAWIFRLEKVKIKSMRSQAKI----LGTIVTAGGAMCMT  151 (333)
Q Consensus        84 ~~~~~~~~~~al~-~~~~~~~~~l~~~~pi~~~ll~~~~~~e~~~~~~~~~~~~~----~g~~l~~~Gv~li~  151 (333)
                       ..++.+|+.+.+ +.+++.++++.+..|+...+.+++++||+.++++      +    +|.++.+.|+.++.
T Consensus       222 -~ia~~~y~~~~~~~~~~~~~~~ls~~~pvia~~~~v~~l~E~~~~~~------~~~~~iG~~lIi~~~~l~~  287 (290)
T TIGR00776       222 -GIGNFFYLFSAQPKVGVATSFSLSQLGVIISTLGGILILGEKKTKRE------MIAISVGIILIIIAANILG  287 (290)
T ss_pred             -HHHHHHHHHHcccccchhhHHHHHHHHHHHHHHHHHHHhccCCCcce------eehhHHHHHHHHHHHHHHh
Confidence             999999999999 9999999999999999999999999999999998      8    99999999998875

These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.

>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional

Probab=98.75  E-value=5.1e-07  Score=82.44  Aligned_cols=138  Identities=15%  Similarity=0.148  Sum_probs=100.3

Q ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHHhc------CCCHHHHHHHHHHHHHHHHHHHHHHHhhcCCC--------CCCHHHH
Q 043160            8 AKPYLGVIFMQFCSSIMSIITKIALTQ------GMSQHVLVAYRMVVATSLIAPFAIVLERKTRP--------KMTFRIF   73 (333)
Q Consensus         8 ~~~~l~~~~~~~~~~~~~~~~k~~l~~------~~~~~~~~~~r~~~~~~~l~~~~~~~~~~~~~--------~~~~~~~   73 (333)
                      ..|.+++++++++|+...+..|..+.+      +.++.....+-..++.++++|+....+.....        ..+...+
T Consensus       193 ~~G~~~~l~s~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lp~~~~~e~~~~~~~~~~~~~~~~~~~~  272 (350)
T PTZ00343        193 WLAFWCAMLSNLGSSLRSIFAKKTMKNKSEIGENLTASNIYMLLTLIASLISLPLVLFFEGKKWVPVWTNYTANMTNYTK  272 (350)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhcccccccccCCHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhhhcccccch
Confidence            469999999999999999999998532      25677666666788888888887644321100        0001011


Q ss_pred             HHH---HHHHHHHHHHHHHHHHHHhcccchhhHHHhhchHHHHHHHHHHHHhccccceecccchhhHHHHHHHHHHHHHH
Q 043160           74 AKI---ALLGLFEPVIGQNLYFTGLKCSTATFTVAMCNILPALTFLMAWIFRLEKVKIKSMRSQAKILGTIVTAGGAMCM  150 (333)
Q Consensus        74 ~~~---~~~g~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~ll~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li  150 (333)
                      ...   ...+.+...+.+.+.+++++++++...++...+.|+++.++++++++|+++..+      ++|.++++.|+.+.
T Consensus       273 ~~~l~~i~~s~l~~~l~n~~~f~~l~~~s~~t~sv~~~lk~V~~iv~s~l~~ge~lt~~~------~iG~~lii~Gv~lY  346 (350)
T PTZ00343        273 GIIIFKIFFSGVWYYLYNEVAFYCLGKVNQVTHAVANTLKRVVIIVSSIIIFQTQVTLLG------YLGMAVAILGALLY  346 (350)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHhhhhHHHhCCCCchHh------HHHHHHHHHHHHHH
Confidence            111   122222223334444579999999999999999999999999999999999998      99999999999885


Q ss_pred             H
Q 043160          151 T  151 (333)
Q Consensus       151 ~  151 (333)
                      .
T Consensus       347 s  347 (350)
T PTZ00343        347 S  347 (350)
T ss_pred             h
Confidence            4

>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]

Probab=98.71  E-value=3.2e-09  Score=88.04  Aligned_cols=278  Identities=15%  Similarity=0.167  Sum_probs=189.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHH
Q 043160            9 KPYLGVIFMQFCSSIMSIITKIALTQGMSQHVLVAYRMVVATSLIAPFAIVLERKTRPKMTFRIFAKIALLGLFEPVIGQ   88 (333)
Q Consensus         9 ~~~l~~~~~~~~~~~~~~~~k~~l~~~~~~~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~   88 (333)
                      ..++.+++-++.||..+......   +-+|.+.+.. ..++++++....++..   .|..+.+.+...++.|.+. ..++
T Consensus         2 ~~~liaL~P~l~WGsip~v~~k~---GG~p~qQ~lG-tT~GALifaiiv~~~~---~p~~T~~~~iv~~isG~~W-s~GQ   73 (288)
T COG4975           2 MDLLIALLPALGWGSIPLVANKF---GGKPYQQTLG-TTLGALIFAIIVFLFV---SPELTLTIFIVGFISGAFW-SFGQ   73 (288)
T ss_pred             hhHHHHHHHHHHhcccceeeeec---CCChhHhhhh-ccHHHHHHHHHHheee---cCccchhhHHHHHHhhhHh-hhhh
Confidence            45788899999999998877644   3456666554 4444444444443332   2667778788888888888 9999


Q ss_pred             HHHHHHhcccchhhHHHhh-chHHHHHHHHHHHHhccccceecccchhhHHHHHHHHHHHHHHHHhcCCcccCCchhhhh
Q 043160           89 NLYFTGLKCSTATFTVAMC-NILPALTFLMAWIFRLEKVKIKSMRSQAKILGTIVTAGGAMCMTLLKGPILEFPWKQVRI  167 (333)
Q Consensus        89 ~~~~~al~~~~~~~~~~l~-~~~pi~~~ll~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~~  167 (333)
                      ...+.|+++.+++.+.++. .++-+-+.+++.+.++|=-+..+.  ..-.+++++.++|+.+-..+++++         .
T Consensus        74 ~~Qfka~~~iGVSkamPiStG~QLVg~sL~gV~~f~EW~t~~~~--IlG~iAliliviG~~lTs~~~~~n---------k  142 (288)
T COG4975          74 ANQFKAIQLIGVSKAMPISTGMQLVGTSLFGVFVFHEWTTPTQI--ILGFIALILIVIGIYLTSKQDRNN---------K  142 (288)
T ss_pred             hhhhhheeeeeeeccccccchhhHhhceeeeEEEEeccCcchhH--HHHHHHHHHHHHhheEeeeecccc---------c
Confidence            9999999999999999985 588899999999999997776540  011335556666776655332211         0


Q ss_pred             hcccCCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCchHHHHHHHHHHHHHHHHHHHhhccCCccceeec
Q 043160          168 LHNQSETGTHNKEEHITKGALMIAAGCFSWSCFIILEAFLLKSYPAELSLTALMCFVSSVEGTILALAIERGNTGIWLLH  247 (333)
Q Consensus       168 ~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  247 (333)
                             ..++. ++...|....+.+.+.|-.|.+..+...-   |..+... -...+.+......-...  .    +..
T Consensus       143 -------~~~~~-~n~kkgi~~L~iSt~GYv~yvvl~~~f~v---~g~saiL-PqAiGMv~~ali~~~~~--~----~~~  204 (288)
T COG4975         143 -------EEENP-SNLKKGIVILLISTLGYVGYVVLFQLFDV---DGLSAIL-PQAIGMVIGALILGFFK--M----EKR  204 (288)
T ss_pred             -------cccCh-HhhhhheeeeeeeccceeeeEeeeccccc---cchhhhh-HHHHHHHHHHHHHhhcc--c----ccc
Confidence                   01244 66779999999999999999888665431   1121111 12223232222221111  1    112


Q ss_pred             cchhHHHHHHHHHHHHHHHHHHHHHHhhcCceeeeeccchhHHHHHHHHHHHhccccchhhh----HHHHHHHhhhhhhe
Q 043160          248 FDAKLLSVLYGGFVSCTAYFIMGWLMKRKGPVFVSSFNPLSMVIIAILGSFFIAEELFLGRI----VGAIVIVIGLYMVL  323 (333)
Q Consensus       248 ~~~~~~~l~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~pv~~~~~~~~~~~e~~~~~~~----~G~~li~~g~~~~~  323 (333)
                      .+...+.-...|+.-.++...+..+.++.+....=.+..+..+++.+-+.++++|+=|..++    +|.++++.|..+..
T Consensus       205 ~~K~t~~nii~G~~Wa~GNl~ml~a~~~~GvAt~FSlSQlgViisTiGGIl~L~ekKtkkEm~~v~iGiilivvgai~lg  284 (288)
T COG4975         205 FNKYTWLNIIPGLIWAIGNLFMLLAAQKVGVATSFSLSQLGVIISTIGGILFLGEKKTKKEMVYVIIGIILIVVGAILLG  284 (288)
T ss_pred             hHHHHHHHHhhHHHHHhhHHHHHHhhhhhceeeeeeHhhheeeeeecceEEEEeccCchhhhhhhhhhHHHHHHHhhhhh
Confidence            23334444566888888899999999999988888888889999999999999999888765    67888888766554

>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]

Probab=98.71  E-value=7.7e-07  Score=78.86  Aligned_cols=133  Identities=15%  Similarity=0.215  Sum_probs=105.9

Q ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHH-HHHHHHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHH
Q 043160            8 AKPYLGVIFMQFCSSIMSIITKIALTQGMSQHVLVA-YRMVVATSLIAPFAIVLERKTRPKMTFRIFAKIALLGLFEPVI   86 (333)
Q Consensus         8 ~~~~l~~~~~~~~~~~~~~~~k~~l~~~~~~~~~~~-~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   86 (333)
                      ..|..+.+.++++|+...+..|...  ..++..... +..........+.  ...... ...+.+.+......|+++...
T Consensus       153 ~~g~~~~l~a~~~~a~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~-~~~~~~~~~~~~~~g~~~~~i  227 (292)
T COG0697         153 LLGLLLALAAALLWALYTALVKRLS--RLGPVTLALLLQLLLALLLLLLF--FLSGFG-APILSRAWLLLLYLGVFSTGL  227 (292)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhc--CCChHHHHHHHHHHHHHHHHHHH--Hhcccc-ccCCHHHHHHHHHHHHHHHHH
Confidence            4799999999999999999999883  566666665 3333222222221  111111 334567788899999999778


Q ss_pred             HHHHHHHHhcccchhhHHHhhchHHHHHHHHHHHHhccccceecccchhhHHHHHHHHHHHHHHH
Q 043160           87 GQNLYFTGLKCSTATFTVAMCNILPALTFLMAWIFRLEKVKIKSMRSQAKILGTIVTAGGAMCMT  151 (333)
Q Consensus        87 ~~~~~~~al~~~~~~~~~~l~~~~pi~~~ll~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~  151 (333)
                      ++.++++++++.+++.++.+..+.|++..++++++++|+++..+      ++|.++.+.|+.+..
T Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~l~~~e~~~~~~------~~G~~li~~g~~l~~  286 (292)
T COG0697         228 AYLLWYYALRLLGASLVALLSLLEPVFAALLGVLLLGEPLSPAQ------LLGAALVVLGVLLAS  286 (292)
T ss_pred             HHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhCCCCcHHH------HHHHHHHHHHHHHHh
Confidence            99999999999999999999999999999999999999999998      999999999999876

>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional

Probab=98.62  E-value=9.6e-07  Score=68.10  Aligned_cols=118  Identities=17%  Similarity=0.174  Sum_probs=90.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHH
Q 043160            9 KPYLGVIFMQFCSSIMSIITKIALTQGMSQHVLVAYRMVVATSLIAPFAIVLERKTRPKMTFRIFAKIALLGLFEPVIGQ   88 (333)
Q Consensus         9 ~~~l~~~~~~~~~~~~~~~~k~~l~~~~~~~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~   88 (333)
                      +++++++++.++-+...++-|... ++.+....... . ..  .+.  .   .         ......+..|+...++++
T Consensus         2 ~~~~~i~~sv~l~~~gQl~~K~g~-~~~g~~~~~~~-~-~~--~~~--~---~---------~~p~~~i~lgl~~~~la~   62 (129)
T PRK02971          2 MGYLWGLASVLLASVAQLSLKWGM-SRLPLLSHAWD-F-IA--ALL--A---F---------GLALRAVLLGLAGYALSM   62 (129)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHHH-hhCCCccchhH-H-HH--HHH--H---H---------hccHHHHHHHHHHHHHHH
Confidence            478899999999999999999995 44443322111 1 00  000  0   0         001225777888889999


Q ss_pred             HHHHHHhcccchhhHHHhhchHHHHHHHHHHH--HhccccceecccchhhHHHHHHHHHHHHHHH
Q 043160           89 NLYFTGLKCSTATFTVAMCNILPALTFLMAWI--FRLEKVKIKSMRSQAKILGTIVTAGGAMCMT  151 (333)
Q Consensus        89 ~~~~~al~~~~~~~~~~l~~~~pi~~~ll~~~--~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~  151 (333)
                      .++.+++++.|++.+.++.+..+.++.+.++.  ++||++|..+      ++|++++++|+.++.
T Consensus        63 ~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls~~~------~iGi~lIi~GV~lv~  121 (129)
T PRK02971         63 LCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFSLKK------TLGVACIMLGVWLIN  121 (129)
T ss_pred             HHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHH------HHHHHHHHHHHHHhc
Confidence            99999999999999999999999888888885  7999999997      999999999999976

>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function

Probab=98.53  E-value=1.9e-06  Score=77.18  Aligned_cols=144  Identities=12%  Similarity=0.029  Sum_probs=114.0

Q ss_pred             ccccHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCH--HHHHHHHHHHHH
Q 043160            5 YHHAKPYLGVIFMQFCSSIMSIITKIALTQGMSQHVLVAYRMVVATSLIAPFAIVLERKTRPKMTF--RIFAKIALLGLF   82 (333)
Q Consensus         5 ~~~~~~~l~~~~~~~~~~~~~~~~k~~l~~~~~~~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~--~~~~~~~~~g~~   82 (333)
                      .++.+|-++++.+++++|..+++-+.. .++.++.++...-.++++++..+.....+++...+.+|  +.... .+...+
T Consensus       164 ~~~i~GDll~l~~a~lya~~nV~~E~~-v~~~~~~~~lg~~Glfg~ii~~iq~~ile~~~i~~~~w~~~~~~~-~v~~~~  241 (334)
T PF06027_consen  164 SNPILGDLLALLGAILYAVSNVLEEKL-VKKAPRVEFLGMLGLFGFIISGIQLAILERSGIESIHWTSQVIGL-LVGYAL  241 (334)
T ss_pred             CccchhHHHHHHHHHHHHHHHHHHHHh-cccCCHHHHHHHHHHHHHHHHHHHHHheehhhhhccCCChhhHHH-HHHHHH
Confidence            357899999999999999999999998 57789999988888888888888877777765444333  33332 333333


Q ss_pred             HHHHHHHHHHHHhcccchhhHHHhhchHHHHHHHHHHHHhccccceecccchhhHHHHHHHHHHHHHHHHhcCC
Q 043160           83 EPVIGQNLYFTGLKCSTATFTVAMCNILPALTFLMAWIFRLEKVKIKSMRSQAKILGTIVTAGGAMCMTLLKGP  156 (333)
Q Consensus        83 ~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~ll~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~~~  156 (333)
                      .....+.+.-..+++++++...+=.-+..++..++.++++|+++++..      ++|.+++++|.++....+.+
T Consensus       242 ~lf~~y~l~p~~l~~ssAt~~nLsLLTsd~~ali~~i~~f~~~~~~ly------~~af~lIiiG~vvy~~~~~~  309 (334)
T PF06027_consen  242 CLFLFYSLVPIVLRMSSATFFNLSLLTSDFYALIIDIFFFGYKFSWLY------ILAFALIIIGFVVYNLAESP  309 (334)
T ss_pred             HHHHHHHHHHHHHHhCccceeehHHHHhhHHHHHHHHHhcCccccHHH------HHHHHHHHHHhheEEccCCc
Confidence            336666677788899999887777788999999999999999999987      99999999999997654433

Some of the sequences in this family are annotated as putative membrane proteins.

>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]

Probab=98.49  E-value=2.8e-06  Score=71.15  Aligned_cols=137  Identities=15%  Similarity=0.130  Sum_probs=115.9

Q ss_pred             ccHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHH
Q 043160            7 HAKPYLGVIFMQFCSSIMSIITKIALTQGMSQHVLVAYRMVVATSLIAPFAIVLERKTRPKMTFRIFAKIALLGLFEPVI   86 (333)
Q Consensus         7 ~~~~~l~~~~~~~~~~~~~~~~k~~l~~~~~~~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   86 (333)
                      ...|..+.+.+..+|+.+.+..|.. .+..+...-+.+-+.+++++.+|+-.......  -..+.-...-+..++++.++
T Consensus       146 Dp~Gv~~Al~AG~~Wa~YIv~G~r~-g~~~~g~~g~a~gm~vAaviv~Pig~~~ag~~--l~~p~ll~laLgvavlSSal  222 (292)
T COG5006         146 DPVGVALALGAGACWALYIVLGQRA-GRAEHGTAGVAVGMLVAALIVLPIGAAQAGPA--LFSPSLLPLALGVAVLSSAL  222 (292)
T ss_pred             CHHHHHHHHHHhHHHHHHHHHcchh-cccCCCchHHHHHHHHHHHHHhhhhhhhcchh--hcChHHHHHHHHHHHHhccc
Confidence            4578999999999999999999999 55566666677789999999999876433322  23455566778888999999


Q ss_pred             HHHHHHHHhcccchhhHHHhhchHHHHHHHHHHHHhccccceecccchhhHHHHHHHHHHHHHHHH
Q 043160           87 GQNLYFTGLKCSTATFTVAMCNILPALTFLMAWIFRLEKVKIKSMRSQAKILGTIVTAGGAMCMTL  152 (333)
Q Consensus        87 ~~~~~~~al~~~~~~~~~~l~~~~pi~~~ll~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~  152 (333)
                      .+.+=..++++.|...-+++.++.|.+.++.++++++|++|..|      |+++...+.+..-.++
T Consensus       223 PYsLEmiAL~rlp~~~F~~LlSLePa~aAl~G~i~L~e~ls~~q------wlaI~~ViaAsaG~~l  282 (292)
T COG5006         223 PYSLEMIALRRLPARTFGTLLSLEPALAALSGLIFLGETLTLIQ------WLAIAAVIAASAGSTL  282 (292)
T ss_pred             chHHHHHHHhhCChhHHHHHHHhhHHHHHHHHHHHhcCCCCHHH------HHHHHHHHHHHhcccc
Confidence            99999999999999999999999999999999999999999997      9999998888775554

>KOG2922 consensus Uncharacterized conserved protein [Function unknown]

Probab=98.46  E-value=4.2e-07  Score=78.77  Aligned_cols=280  Identities=12%  Similarity=0.132  Sum_probs=167.9

Q ss_pred             ccccccHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHH
Q 043160            3 LQYHHAKPYLGVIFMQFCSSIMSIITKIALTQGMSQHVLVAYRMVVATSLIAPFAIVLERKTRPKMTFRIFAKIALLGLF   82 (333)
Q Consensus         3 ~~~~~~~~~l~~~~~~~~~~~~~~~~k~~l~~~~~~~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~   82 (333)
                      |+.....|..+.+.+.+..|....+-|+.+.+           ....        -.+..+. +....+  -+....|.+
T Consensus        15 ~~~d~~~G~~LaissS~~Ig~sfilkKkgl~r-----------~~~~--------~~ra~~g-g~~yl~--~~~Ww~G~l   72 (335)
T KOG2922|consen   15 MSSDNIIGLVLAISSSIFIGSSFILKKKGLKR-----------AGAS--------GLRAGEG-GYGYLK--EPLWWAGML   72 (335)
T ss_pred             hccCceeeeeehhhccEEEeeehhhhHHHHHH-----------Hhhh--------cccccCC-Ccchhh--hHHHHHHHH
Confidence            55666788888888888888888888888422           1100        0011111 111112  245567888


Q ss_pred             HHHHHHHHHHHHhcccchhhHHHhhchHHHHHHHHHHHHhccccceecccchhhHHHHHHHHHHHHHHHHhcCCcccCCc
Q 043160           83 EPVIGQNLYFTGLKCSTATFTVAMCNILPALTFLMAWIFRLEKVKIKSMRSQAKILGTIVTAGGAMCMTLLKGPILEFPW  162 (333)
Q Consensus        83 ~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~ll~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~  162 (333)
                      .+.++...-|.|+.+.|++..+++..++-+..++++..+++||++...      .+|+.++++|..+++.- .|.+....
T Consensus        73 tm~vGei~NFaAYaFAPasLVtPLGAlsvi~saila~~~L~Ekl~~~g------~lGc~l~v~Gst~iV~h-aP~e~~i~  145 (335)
T KOG2922|consen   73 TMIVGEIANFAAYAFAPASLVTPLGALSVIISAILASFFLKEKLNLLG------ILGCVLCVVGSTTIVIH-APKEQEIE  145 (335)
T ss_pred             HHHHHhHhhHHHHhhchHhhhccchhHHHHHHHHHHHHHHHHHHHHhh------hhheeEEecccEEEEEe-cCcccccc
Confidence            889999999999999999999999999999999999999999999998      99999999999888632 23221111


Q ss_pred             hhhhhhcccCCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCchHHHHHHHHHHHHHH--------HHHH-
Q 043160          163 KQVRILHNQSETGTHNKEEHITKGALMIAAGCFSWSCFIILEAFLLKSYPAELSLTALMCFVSSVEG--------TILA-  233 (333)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~-  233 (333)
                      +.-+..+.      ..+ .....- ...+...++.=.+  ..|   +++. +.....|..+.+.+..        +..+ 
T Consensus       146 t~~el~~~------~~~-~~Fliy-~~~iil~~~il~~--~~~---p~~g-~tnilvyi~i~s~iGS~tV~svKalg~ai  211 (335)
T KOG2922|consen  146 SVEEVWEL------ATE-PGFLVY-VIIIILIVLILIF--FYA---PRYG-QTNILVYIGICSLIGSLTVMSVKALGIAI  211 (335)
T ss_pred             cHHHHHHH------hcC-ccHHHH-HHHHHHHHHHHhe--eec---cccc-ccceeehhhHhhhhcceeeeeHHHHHHHH
Confidence            11111000      001 111111 1111111111111  111   1111 1112223333333211        1111 


Q ss_pred             -HhhccCCccceeeccchhHHHHHHHHHHHHHHHHHHHHHHhhcCceeeeeccch-hHHHHHHHHHHHhcccc--ch---
Q 043160          234 -LAIERGNTGIWLLHFDAKLLSVLYGGFVSCTAYFIMGWLMKRKGPVFVSSFNPL-SMVIIAILGSFFIAEEL--FL---  306 (333)
Q Consensus       234 -~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~-~pv~~~~~~~~~~~e~~--~~---  306 (333)
                       ....+  ..+.  .....|..++.+..+...-..-.++|++..+++.++++.++ -..++++-+.++|+|--  +.   
T Consensus       212 klt~~g--~~ql--~~~~ty~~~l~~~~~~~~Q~~yLNkAL~~fntslV~PiyyV~fTtl~I~as~I~Fkew~~~~~~~i  287 (335)
T KOG2922|consen  212 KLTFSG--NNQL--FYPLTWIFLLVVATCVSTQMNYLNKALDLFNTSIVSPIYYVMFTTLVILASAILFKEWSGQDALDI  287 (335)
T ss_pred             HHHhcC--Cccc--ccHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhcchhHHHHHHHHHHHHHHHHHHHhcCCcHHHH
Confidence             11121  1222  22245666666555566667778899999999988888776 46667777888888863  22   


Q ss_pred             -hhhHHHHHHHhhhhhheecCCCC
Q 043160          307 -GRIVGAIVIVIGLYMVLWGRSKD  329 (333)
Q Consensus       307 -~~~~G~~li~~g~~~~~~~~~~~  329 (333)
                       ....|+..++.|+++....|+++
T Consensus       288 ~~~~~Gf~ti~~G~flL~~~kd~~  311 (335)
T KOG2922|consen  288 AGELCGFVTIFLGIFLLHRTKDME  311 (335)
T ss_pred             HHHHHhHHHhhheeeEeeeecccc
Confidence             45678899999999987766544

>COG2962 RarD Predicted permeases [General function prediction only]

Probab=98.43  E-value=1.4e-06  Score=74.65  Aligned_cols=140  Identities=14%  Similarity=0.175  Sum_probs=110.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhhhCCCchHHHHHHHHHHHHHHHHHHHhhccCCcccee-eccchhHHHHHHHHHHH
Q 043160          184 TKGALMIAAGCFSWSCFIILEAFLLKSYPAELSLTALMCFVSSVEGTILALAIERGNTGIWL-LHFDAKLLSVLYGGFVS  262 (333)
Q Consensus       184 ~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~~~~~  262 (333)
                      ..|.++++.+-+.|+....+.|- .++. ++.....++.+.+............+ ...-.. ...+..+......++..
T Consensus         6 ~~Gil~~l~Ay~lwG~lp~y~kl-l~~~-~~~eIlahRviwS~~~~l~ll~~~r~-~~~~~~~~~~p~~~~~~~l~a~li   82 (293)
T COG2962           6 RKGILLALLAYLLWGLLPLYFKL-LEPL-PATEILAHRVIWSFPFMLALLFLLRQ-WRELKQLLKQPKTLLMLALTALLI   82 (293)
T ss_pred             cchhHHHHHHHHHHHHHHHHHHH-HccC-CHHHHHHHHHHHHHHHHHHHHHHHhh-hHHHHHHHhCcHHHHHHHHHHHHH
Confidence            47999999999999998887765 5555 45778888888887766666555443 111111 12234566666667778


Q ss_pred             HHHHHHHHHHHhhcCceeeeeccchhHHHHHHHHHHHhccccchhhhHHHHHHHhhhhhheecC
Q 043160          263 CTAYFIMGWLMKRKGPVFVSSFNPLSMVIIAILGSFFIAEELFLGRIVGAIVIVIGLYMVLWGR  326 (333)
Q Consensus       263 ~~~~~~~~~a~~~~~~~~~~~~~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~~~~~~~~  326 (333)
                      ..-...+.+|.++....++|.-.+++|.+.+++|.++++|+++..|++..++..+|+....+..
T Consensus        83 ~~nW~lfiWAvn~g~~leaSLGY~InPL~~VllG~lflkErls~~Q~iAV~lA~~GV~~~~~~~  146 (293)
T COG2962          83 GLNWWLFIWAVNNGHVLEASLGYFINPLVNVLLGRLFLKERLSRLQWIAVGLAAAGVLIQTWLL  146 (293)
T ss_pred             HHHHHHhheecCCCchhHHHhHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHc
Confidence            8889999999999999999999999999999999999999999999999999999988776544

>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional

Probab=98.43  E-value=1.2e-06  Score=65.89  Aligned_cols=66  Identities=11%  Similarity=0.067  Sum_probs=61.1

Q ss_pred             HHH-HHHHHHHHHHHHhhcCceeeeeccchhHHHHHHHHHHHhccccchhhhHHHHHHHhhhhhhee
Q 043160          259 GFV-SCTAYFIMGWLMKRKGPVFVSSFNPLSMVIIAILGSFFIAEELFLGRIVGAIVIVIGLYMVLW  324 (333)
Q Consensus       259 ~~~-~~~~~~~~~~a~~~~~~~~~~~~~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~~~~~~  324 (333)
                      +++ ...++.++..++++.+.+++-.+.++.++.+.+.+++++||++++.+++|.+++++|++++..
T Consensus        43 ~~~~~~l~~~~~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~ls~~~~~Gi~lii~Gv~~i~~  109 (111)
T PRK15051         43 ALACLGLAMVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSPRHWCGVAFIIGGIVILGS  109 (111)
T ss_pred             HHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhc
Confidence            334 788999999999999999999999999999999999999999999999999999999987653

>PF06379 RhaT: L-rhamnose-proton symport protein (RhaT); InterPro: IPR004673 These proteins are members of the L-Rhamnose Symporter (RhaT) family

Probab=98.19  E-value=0.0015  Score=57.94  Aligned_cols=305  Identities=13%  Similarity=0.089  Sum_probs=188.2

Q ss_pred             ccccccHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHH-HhhcC----CCCCCHHHHHHHH
Q 043160            3 LQYHHAKPYLGVIFMQFCSSIMSIITKIALTQGMSQHVLVAYRMVVATSLIAPFAIV-LERKT----RPKMTFRIFAKIA   77 (333)
Q Consensus         3 ~~~~~~~~~l~~~~~~~~~~~~~~~~k~~l~~~~~~~~~~~~r~~~~~~~l~~~~~~-~~~~~----~~~~~~~~~~~~~   77 (333)
                      |+.+-..|+++..+.+++-|...+-.|..  ++.+-...-....+++.++ .|.... ..-+.    ....+.+......
T Consensus         1 m~~~ii~Gii~h~iGg~~~~sfy~P~kkv--k~WsWEs~Wlv~gi~swli-~P~~~a~l~ip~~~~i~~~~~~~~l~~~~   77 (344)
T PF06379_consen    1 MNSAIILGIIFHAIGGFASGSFYVPFKKV--KGWSWESYWLVQGIFSWLI-VPWLWALLAIPDFFSIYSATPASTLFWTF   77 (344)
T ss_pred             CCchHHHHHHHHHHHHHHhhhhccchhhc--CCccHHHHHHHHHHHHHHH-HHHHHHHHhCCcHHHHHHhCChhHHHHHH
Confidence            55567789999999999999999999988  5566555544444444433 333322 11111    2234556788888


Q ss_pred             HHHHHHHHHHHHHHHHHhcccchhhHHHh-hchHHHHHHHHHHHHhccccc-eecccchhhHHHHHHHHHHHHHHHHhcC
Q 043160           78 LLGLFEPVIGQNLYFTGLKCSTATFTVAM-CNILPALTFLMAWIFRLEKVK-IKSMRSQAKILGTIVTAGGAMCMTLLKG  155 (333)
Q Consensus        78 ~~g~~~~~~~~~~~~~al~~~~~~~~~~l-~~~~pi~~~ll~~~~~~e~~~-~~~~~~~~~~~g~~l~~~Gv~li~~~~~  155 (333)
                      +.|++. ..+...|-.+++|+..+...-+ ..+...+-.++-.++.++--. ..++-.+.-++|++++++|+.++...+.
T Consensus        78 l~G~lW-GIGgltfGl~mryLGvSLG~sI~lGl~~~~GTlippi~~g~~~~l~~~~~g~~vL~Gv~v~LiGIai~g~AG~  156 (344)
T PF06379_consen   78 LFGVLW-GIGGLTFGLAMRYLGVSLGQSIALGLCAVFGTLIPPIFQGTFDELLATPSGQIVLLGVAVCLIGIAICGKAGS  156 (344)
T ss_pred             HHHHHH-hcchhhHhHHHHHHhHHHHHHHHHHHHHHHhhchHHHHcCcccccccCCCchhhhhHHHHHHHHHHHHhHHHH
Confidence            999998 9999999999999999987744 567777777777776543200 1122244569999999999999875432


Q ss_pred             CcccCCchhhhhhcccCCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHH------hhhCC-CchH----HHHHHHHH
Q 043160          156 PILEFPWKQVRILHNQSETGTHNKEEHITKGALMIAAGCFSWSCFIILEAFL------LKSYP-AELS----LTALMCFV  224 (333)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~------~~~~~-~~~~----~~~~~~~~  224 (333)
                      .++          .+.  +.+... .+..+|.+.++.+++..|+.+.-....      ..... +|..    .....+.-
T Consensus       157 ~Ke----------~~~--~~~~~e-fn~~kGl~iAv~sGv~Sa~fn~g~~ag~pi~~~a~a~G~~~l~~~l~~~vvv~~G  223 (344)
T PF06379_consen  157 MKE----------KEL--GEEAKE-FNFKKGLIIAVLSGVMSACFNFGLDAGKPIHEAAVAAGVNPLYANLPVYVVVLWG  223 (344)
T ss_pred             hhh----------hhh--ccchhh-hhhhhhHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHcCCCcHHHhCchhhhhhhh
Confidence            111          100  111234 677899999999999999887654321      01111 1211    11222333


Q ss_pred             HHHHHHHHHHhhcc--CCcc---cee---eccchhHHHHHHHHHHHHHHHHHHHHHHhhcCce----eeeeccchhHHHH
Q 043160          225 SSVEGTILALAIER--GNTG---IWL---LHFDAKLLSVLYGGFVSCTAYFIMGWLMKRKGPV----FVSSFNPLSMVII  292 (333)
Q Consensus       225 ~~~~~~~~~~~~~~--~~~~---~~~---~~~~~~~~~l~~~~~~~~~~~~~~~~a~~~~~~~----~~~~~~~~~pv~~  292 (333)
                      +.+.-....+....  .+..   +..   .+...+...-+..|++-...+++|..+-.+.++.    --.+.+.+..+++
T Consensus       224 Gf~tN~~yc~~~l~~~k~~s~~~d~~~~~~~~~~N~~~~aLaG~lWy~qfffYg~G~s~lg~~~~~~sW~i~ma~~vl~s  303 (344)
T PF06379_consen  224 GFITNLIYCLILLAKNKNWSWKGDYSVAKPPLLKNYLFCALAGVLWYSQFFFYGMGESKLGASGPFSSWAIHMALIVLFS  303 (344)
T ss_pred             HHHHHHHHHHHHHhhcCCCccccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccHHHHHHHHHHHHHH
Confidence            34444444433211  0111   111   1112345555556666777788888888777743    3456677788888


Q ss_pred             HHHHHHHhccc------cchhhhHHHHHHHhhhhhheec
Q 043160          293 AILGSFFIAEE------LFLGRIVGAIVIVIGLYMVLWG  325 (333)
Q Consensus       293 ~~~~~~~~~e~------~~~~~~~G~~li~~g~~~~~~~  325 (333)
                      -+.+. .++|-      .-..-+.|+++++.++.++-.+
T Consensus       304 nvwGl-~lkEWKg~s~kt~~vl~~G~~vlI~s~~ivG~G  341 (344)
T PF06379_consen  304 NVWGL-ILKEWKGASKKTIRVLVLGIAVLILSVVIVGYG  341 (344)
T ss_pred             HHHHH-HHHHhccCCcccHHHHHHHHHHHHHHHHHHhcc
Confidence            88886 57773      2234578888888887776544

This family includes two characterised members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.; GO: 0015153 rhamnose transmembrane transporter activity, 0008645 hexose transport, 0016021 integral to membrane

>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long

Probab=98.11  E-value=6.2e-05  Score=65.05  Aligned_cols=134  Identities=18%  Similarity=0.126  Sum_probs=95.5

Q ss_pred             ccccHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHHH
Q 043160            5 YHHAKPYLGVIFMQFCSSIMSIITKIALTQGMSQHVLVAYRMVVATSLIAPFAIVLERKTRPKMTFRIFAKIALLGLFEP   84 (333)
Q Consensus         5 ~~~~~~~l~~~~~~~~~~~~~~~~k~~l~~~~~~~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~   84 (333)
                      .+..++++..+++++.+..+....|..   +.+|....+=. .++.++...+.....++   +...+..++-.+.|++. 
T Consensus       134 ~~~~kgi~~Ll~stigy~~Y~~~~~~~---~~~~~~~~lPq-aiGm~i~a~i~~~~~~~---~~~~k~~~~nil~G~~w-  205 (269)
T PF06800_consen  134 SNMKKGILALLISTIGYWIYSVIPKAF---HVSGWSAFLPQ-AIGMLIGAFIFNLFSKK---PFFEKKSWKNILTGLIW-  205 (269)
T ss_pred             cchhhHHHHHHHHHHHHHHHHHHHHhc---CCChhHhHHHH-HHHHHHHHHHHhhcccc---cccccchHHhhHHHHHH-
Confidence            356789999999999999999998875   36776665543 34433333332222221   22223345567888888 


Q ss_pred             HHHHHHHHHHhcccchhhHHHhhchHHHHHHHHHHHHhccccceecccchhhHHHHHHHHHHHH
Q 043160           85 VIGQNLYFTGLKCSTATFTVAMCNILPALTFLMAWIFRLEKVKIKSMRSQAKILGTIVTAGGAM  148 (333)
Q Consensus        85 ~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~ll~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~  148 (333)
                      ..++.+++.+.+....+.+..+.++.+++..+-+.+++||+=++||  -..-++|+++.++|.+
T Consensus       206 ~ignl~~~is~~~~G~a~af~lSQ~~vvIStlgGI~il~E~Kt~ke--~~~~~~G~~Liv~G~i  267 (269)
T PF06800_consen  206 GIGNLFYLISAQKNGVATAFTLSQLGVVISTLGGIFILKEKKTKKE--MIYTLIGLILIVIGAI  267 (269)
T ss_pred             HHHHHHHHHhHHhccchhhhhHHhHHHHHHHhhhheEEEecCchhh--HHHHHHHHHHHHHhhh
Confidence            9999999999999999999999999999999999999999988776  1122345555555544

Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane

>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]

Probab=98.10  E-value=1.4e-06  Score=73.52  Aligned_cols=135  Identities=13%  Similarity=0.208  Sum_probs=101.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhhhCCCchHHHHHHHHHHHHHHHHHHHhhccCCccceeeccchhHHHHHHHHHHHH
Q 043160          184 TKGALMIAAGCFSWSCFIILEAFLLKSYPAELSLTALMCFVSSVEGTILALAIERGNTGIWLLHFDAKLLSVLYGGFVSC  263 (333)
Q Consensus       184 ~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  263 (333)
                      ..|..+..++ ..+...++..++.++.  +|+......+..-.+...|..+...+ .    ...+...-..++.=|+.+.
T Consensus        37 ~~gl~l~~vs-~ff~~~~vv~t~~~e~--~p~e~a~~r~l~~mlit~pcliy~~~-~----v~gp~g~R~~LiLRg~mG~  108 (346)
T KOG4510|consen   37 NLGLLLLTVS-YFFNSCMVVSTKVLEN--DPMELASFRLLVRMLITYPCLIYYMQ-P----VIGPEGKRKWLILRGFMGF  108 (346)
T ss_pred             ccCceehhhH-HHHhhHHHhhhhhhcc--ChhHhhhhhhhhehhhhheEEEEEee-e----eecCCCcEEEEEeehhhhh
Confidence            4777777777 7777777777776665  45666666666666666666554332 1    1111111222344566688


Q ss_pred             HHHHHHHHHHhhcCceeeeeccchhHHHHHHHHHHHhccccchhhhHHHHHHHhhhhhheecC
Q 043160          264 TAYFIMGWLMKRKGPVFVSSFNPLSMVIIAILGSFFIAEELFLGRIVGAIVIVIGLYMVLWGR  326 (333)
Q Consensus       264 ~~~~~~~~a~~~~~~~~~~~~~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~~~~~~~~  326 (333)
                      .+....++++++.+-+.++++....|+++.+++|++++|+.|....+|..+.+.|++++.+.+
T Consensus       109 tgvmlmyya~~~mslaDA~vItFssPvft~ifaw~~LkE~~t~~eaL~s~itl~GVVLIvRPp  171 (346)
T KOG4510|consen  109 TGVMLMYYALMYMSLADAVVITFSSPVFTIIFAWAFLKEPFTKFEALGSLITLLGVVLIVRPP  171 (346)
T ss_pred             hHHHHHHHHHhhcchhheEEEEecChHHHHHHHHHHHcCCCcHHHHHHHHHhhheEEEEecCC
Confidence            888999999999999999999999999999999999999999999999999999999998654

>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function

Probab=98.02  E-value=2.8e-05  Score=69.12  Aligned_cols=118  Identities=19%  Similarity=0.225  Sum_probs=89.5

Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHHHHhhhCCC-chHHHHHHHHHHHHHHHHHHHhhccCCccceeeccchhHHHHHHHH
Q 043160          181 EHITKGALMIAAGCFSWSCFIILEAFLLKSYPA-ELSLTALMCFVSSVEGTILALAIERGNTGIWLLHFDAKLLSVLYGG  259 (333)
Q Consensus       181 ~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  259 (333)
                      .+...|..+++.++++.+....++|+..++.+. +..                    +  +....+...+..|    +.|
T Consensus         3 ~~~~iGv~lav~ss~~~~~g~~lqk~~~~r~~~~~~~--------------------~--~~~~~~~l~~~~W----~~G   56 (300)
T PF05653_consen    3 TDFYIGVLLAVVSSIFIAVGFNLQKKSHLRLPRGSLR--------------------A--GSGGRSYLRRPLW----WIG   56 (300)
T ss_pred             chhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccc--------------------c--cchhhHHHhhHHH----HHH
Confidence            567799999999999999999999998777642 010                    0  0000000011112    233


Q ss_pred             HH-HHHHHHHHHHHHhhcCceeeeeccchhHHHHHHHHHHHhccccchhhhHHHHHHHhhhhhhee
Q 043160          260 FV-SCTAYFIMGWLMKRKGPVFVSSFNPLSMVIIAILGSFFIAEELFLGRIVGAIVIVIGLYMVLW  324 (333)
Q Consensus       260 ~~-~~~~~~~~~~a~~~~~~~~~~~~~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~~~~~~  324 (333)
                      ++ ..++..+.+.|+...+++.++++..+..++..+++..+++|+++...+.|+++++.|..+...
T Consensus        57 ~~~~~~g~~~~~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~~~~~~~G~~l~i~G~~liv~  122 (300)
T PF05653_consen   57 LLLMVLGEILNFVALGFAPASLVAPLGALSLVFNAVLARFFLGEKLTRRDIVGCALIILGSVLIVI  122 (300)
T ss_pred             HHHHhcchHHHHHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcccchHhHHhhHHHHHhhheeeEE
Confidence            44 566677888999999999999999999999999999999999999999999999999776553

>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []

Probab=98.01  E-value=0.00011  Score=65.82  Aligned_cols=126  Identities=15%  Similarity=0.111  Sum_probs=97.0

Q ss_pred             HHHHHHHHHHHhhhCC-C--chHHHHHHHHHHHHHHHHHHHhhccCCccceeeccchhHHHHHHHHHHHHHHHHHHHHHH
Q 043160          197 WSCFIILEAFLLKSYP-A--ELSLTALMCFVSSVEGTILALAIERGNTGIWLLHFDAKLLSVLYGGFVSCTAYFIMGWLM  273 (333)
Q Consensus       197 ~a~~~v~~~~~~~~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~a~  273 (333)
                      +..+.+.+++..++.. .  +...++.++....+...+.......  ..    +....+......+++..++..+.+.++
T Consensus        12 ~~~~g~~qE~i~~~~~~~~~~~~lt~~q~~~~~~~~~~~~~~~~~--~~----~~~~~~~~~~~~~~~~~~~~~~~~~al   85 (303)
T PF08449_consen   12 CCSYGILQEKIMTTPYGSPFPLFLTFVQFAFNALFSFILLSLFKF--PK----SRKIPLKKYAILSFLFFLASVLSNAAL   85 (303)
T ss_pred             HHHHHHHHHHHHcCCCCCcccHHHHHHHHHHHHHHHHHHHHhccc--cC----CCcChHHHHHHHHHHHHHHHHHHHHHH
Confidence            3345567777766543 3  6678888888887777666654321  11    112334445566777888899999999


Q ss_pred             hhcCceeeeeccchhHHHHHHHHHHHhccccchhhhHHHHHHHhhhhhheecCCC
Q 043160          274 KRKGPVFVSSFNPLSMVIIAILGSFFIAEELFLGRIVGAIVIVIGLYMVLWGRSK  328 (333)
Q Consensus       274 ~~~~~~~~~~~~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~~~~~~~~~~  328 (333)
                      ++.+.....+.....|+..+++++++++++.+..++.+.+++.+|+++....+.+
T Consensus        86 ~~i~~p~~~~~ks~~~i~vmi~~~l~~~k~y~~~~~~~v~li~~Gv~~~~~~~~~  140 (303)
T PF08449_consen   86 KYISYPTQIVFKSSKPIPVMILGVLILGKRYSRRQYLSVLLITIGVAIFTLSDSS  140 (303)
T ss_pred             HhCChHHHHHHhhhHHHHHHHHHHHhcCccccHHHHHHHHHHHhhHheeeecccc
Confidence            9999999999999999999999999999999999999999999999998876543

; GO: 0055085 transmembrane transport

>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function

Probab=97.98  E-value=1.2e-05  Score=59.83  Aligned_cols=110  Identities=14%  Similarity=0.239  Sum_probs=77.1

Q ss_pred             HHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Q 043160           15 IFMQFCSSIMSIITKIALTQGMSQHVLVAYRMVVATSLIAPFAIVLERKTRPKMTFRIFAKIALLGLFEPVIGQNLYFTG   94 (333)
Q Consensus        15 ~~~~~~~~~~~~~~k~~l~~~~~~~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a   94 (333)
                      ++.+++||.++++.|.. .++.++..-.. |..-....++             .+++    +.+.=+++ -.+...|++.
T Consensus         2 l~Vg~~WG~Tnpfik~g-~~~~~~~~~~~-~~~~~~~~Ll-------------~n~~----y~ipf~lN-q~GSv~f~~~   61 (113)
T PF10639_consen    2 LLVGILWGCTNPFIKRG-SSGLEKVKASL-QLLQEIKFLL-------------LNPK----YIIPFLLN-QSGSVLFFLL   61 (113)
T ss_pred             eeehHHhcCchHHHHHH-HhhcCCccchH-HHHHHHHHHH-------------HhHH----HHHHHHHH-HHHHHHHHHH
Confidence            35678999999999999 56555444331 3211111100             1122    22222333 6678899999


Q ss_pred             hcccchhhHHHh-hchHHHHHHHHHHHHhccccceecccchhhHHHHHHHHHHHHHH
Q 043160           95 LKCSTATFTVAM-CNILPALTFLMAWIFRLEKVKIKSMRSQAKILGTIVTAGGAMCM  150 (333)
Q Consensus        95 l~~~~~~~~~~l-~~~~pi~~~ll~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li  150 (333)
                      +.+.|.+.+.++ +++.=++|++.++++.+|..+++.      ++|+.+.++|+.++
T Consensus        62 L~~~dlSlavPi~Nsl~fvfT~l~g~~lge~~~~~~~------~~G~~Li~~Gv~Lc  112 (113)
T PF10639_consen   62 LGSADLSLAVPIANSLAFVFTALTGWLLGEEVISRRT------WLGMALILAGVALC  112 (113)
T ss_pred             HhcCCceeeehHHhHHHHHHHHHHHHHhcCcccchhH------HHHHHHHHcCeeee
Confidence            999999999999 588999999999888777777776      99999999998753

Many members are annotated as potential transmembrane proteins.

>PRK10452 multidrug efflux system protein MdtJ; Provisional

Probab=97.93  E-value=0.0001  Score=55.83  Aligned_cols=67  Identities=18%  Similarity=0.385  Sum_probs=58.0

Q ss_pred             HHHHHHHHHHHHhhcCceeeeec-cchhHHHHHHHHHHHhccccchhhhHHHHHHHhhhhhheecCCC
Q 043160          262 SCTAYFIMGWLMKRKGPVFVSSF-NPLSMVIIAILGSFFIAEELFLGRIVGAIVIVIGLYMVLWGRSK  328 (333)
Q Consensus       262 ~~~~~~~~~~a~~~~~~~~~~~~-~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~~~~~~~~~~  328 (333)
                      ...+++++..++++.+.+.+=.+ .-+..+.+.+.+++++||++++.+++|+++|++|++......++
T Consensus        40 ~~~sf~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~~~~~gi~lIi~GVi~l~l~~~~  107 (120)
T PRK10452         40 ISLSYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLMKIAGLTTLVAGIVLIKSGTRK  107 (120)
T ss_pred             HHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhcCCCC
Confidence            88899999999999988665444 56788889999999999999999999999999999998765543

>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins

Probab=97.92  E-value=0.00017  Score=56.49  Aligned_cols=131  Identities=15%  Similarity=0.119  Sum_probs=99.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhhCCCchHHHHHHHHHHHHHHHHHHHhhccCCccceeeccchhHHHHHHHHHHHHHHH
Q 043160          187 ALMIAAGCFSWSCFIILEAFLLKSYPAELSLTALMCFVSSVEGTILALAIERGNTGIWLLHFDAKLLSVLYGGFVSCTAY  266 (333)
Q Consensus       187 ~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~  266 (333)
                      .++++.++.+-++....+.++.++..+|....++.+..+.+.........++ .  +........|+... -|+++...-
T Consensus         3 ~lla~~aG~~i~~q~~~N~~L~~~~gs~~~as~i~~~~G~i~~~i~~~~~~~-~--~~~~~~~~p~w~~l-GG~lG~~~V   78 (138)
T PF04657_consen    3 ILLALLAGALIALQAAFNGQLGKALGSPLVASFISFGVGFILLLIILLITGR-P--SLASLSSVPWWAYL-GGLLGVFFV   78 (138)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHHHHhcc-c--ccchhccCChHHhc-cHHHHHHHH
Confidence            5778889999999999999999988778999999999999988888876654 2  22222223344443 577788888


Q ss_pred             HHHHHHHhhcCceeeeeccc-hhHHHHHHHHHH----HhccccchhhhHHHHHHHhhhhh
Q 043160          267 FIMGWLMKRKGPVFVSSFNP-LSMVIIAILGSF----FIAEELFLGRIVGAIVIVIGLYM  321 (333)
Q Consensus       267 ~~~~~a~~~~~~~~~~~~~~-~~pv~~~~~~~~----~~~e~~~~~~~~G~~li~~g~~~  321 (333)
                      .+.....++.+++....+.. -+.+.+.+++.+    .-++++++.+.+|.+++++|+++
T Consensus        79 ~~~~~~vp~lG~~~~~~l~~~GQl~~sl~iD~fG~fg~~~~~~~~~r~lG~~l~i~Gv~L  138 (138)
T PF04657_consen   79 LSNIILVPRLGAALTTILIVAGQLIASLLIDHFGLFGAPKRPFSLRRILGLALMIAGVIL  138 (138)
T ss_pred             HHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHccccCCCCCCCCHHHHHHHHHHHHHHhC
Confidence            88899999999876665544 467777777875    23566999999999999999864

>PRK09541 emrE multidrug efflux protein; Reviewed

Probab=97.85  E-value=0.00016  Score=53.97  Aligned_cols=66  Identities=17%  Similarity=0.345  Sum_probs=56.9

Q ss_pred             HHHHHHHHHHHHhhcCceeeeec-cchhHHHHHHHHHHHhccccchhhhHHHHHHHhhhhhheecCC
Q 043160          262 SCTAYFIMGWLMKRKGPVFVSSF-NPLSMVIIAILGSFFIAEELFLGRIVGAIVIVIGLYMVLWGRS  327 (333)
Q Consensus       262 ~~~~~~~~~~a~~~~~~~~~~~~-~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~~~~~~~~~  327 (333)
                      ..+++.++..++++.+.+.+=.. .-+..+.+.+.++++|||++++.+++|+++|++|++..+..++
T Consensus        40 ~~~sf~~l~~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~~~~~~~gi~lIi~GVi~l~l~~~  106 (110)
T PRK09541         40 YCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLVINLLSR  106 (110)
T ss_pred             HHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcCCC
Confidence            78889999999999888655333 5578888999999999999999999999999999999876553

>PRK10650 multidrug efflux system protein MdtI; Provisional

Probab=97.84  E-value=0.00042  Score=51.58  Aligned_cols=64  Identities=16%  Similarity=0.201  Sum_probs=57.2

Q ss_pred             HHHHHHHHHHHHHHhcccchhhHHHh-hchHHHHHHHHHHHHhccccceecccchhhHHHHHHHHHHHHHH
Q 043160           81 LFEPVIGQNLYFTGLKCSTATFTVAM-CNILPALTFLMAWIFRLEKVKIKSMRSQAKILGTIVTAGGAMCM  150 (333)
Q Consensus        81 ~~~~~~~~~~~~~al~~~~~~~~~~l-~~~~pi~~~ll~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li  150 (333)
                      ......++++...++++.|.+.+..+ .....+.+.+.+++++||++|..+      ++++.+.+.|++.+
T Consensus        42 ~~~~~~sf~~Ls~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~~~~------~~gi~lIi~GVi~l  106 (109)
T PRK10650         42 LAAVLAAFSALSQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNRKG------WIGLVLLLAGMVMI  106 (109)
T ss_pred             HHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHH------HHHHHHHHHHHHHh
Confidence            34448889999999999999999876 568999999999999999999997      99999999999885

>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins

Probab=97.75  E-value=0.00074  Score=52.84  Aligned_cols=130  Identities=12%  Similarity=0.054  Sum_probs=96.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcCCC-HHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 043160           11 YLGVIFMQFCSSIMSIITKIALTQGMS-QHVLVAYRMVVATSLIAPFAIVLERKTRPKMTFRIFAKIALLGLFEPVIGQN   89 (333)
Q Consensus        11 ~l~~~~~~~~~~~~~~~~k~~l~~~~~-~~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~   89 (333)
                      .++.+++..+-+....++-.. .+..+ |...++..+..+.+.+..+....+++..+..+ +..++....|+++ +....
T Consensus         3 ~lla~~aG~~i~~q~~~N~~L-~~~~gs~~~as~i~~~~G~i~~~i~~~~~~~~~~~~~~-~~p~w~~lGG~lG-~~~V~   79 (138)
T PF04657_consen    3 ILLALLAGALIALQAAFNGQL-GKALGSPLVASFISFGVGFILLLIILLITGRPSLASLS-SVPWWAYLGGLLG-VFFVL   79 (138)
T ss_pred             HHHHHHHHHHHHHHHHHHHHH-HHHhCccHHHHHHHHHHHHHHHHHHHHHhcccccchhc-cCChHHhccHHHH-HHHHH
Confidence            456777777788888777777 56565 99999999999999998887776654333222 2344556688888 99999


Q ss_pred             HHHHHhcccchhhHHHhhc-hHHHHHHHHHHH----HhccccceecccchhhHHHHHHHHHHHHH
Q 043160           90 LYFTGLKCSTATFTVAMCN-ILPALTFLMAWI----FRLEKVKIKSMRSQAKILGTIVTAGGAMC  149 (333)
Q Consensus        90 ~~~~al~~~~~~~~~~l~~-~~pi~~~ll~~~----~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l  149 (333)
                      +..+..++.+++.+..+.- -+-+...++-.+    .-+++++.++      ++|+++.++|+.+
T Consensus        80 ~~~~~vp~lG~~~~~~l~~~GQl~~sl~iD~fG~fg~~~~~~~~~r------~lG~~l~i~Gv~L  138 (138)
T PF04657_consen   80 SNIILVPRLGAALTTILIVAGQLIASLLIDHFGLFGAPKRPFSLRR------ILGLALMIAGVIL  138 (138)
T ss_pred             HHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHccccCCCCCCCCHHH------HHHHHHHHHHHhC
Confidence            9999999999999887754 455555666664    2556666665      9999999999863

>PRK10452 multidrug efflux system protein MdtJ; Provisional

Probab=97.73  E-value=0.00018  Score=54.55  Aligned_cols=68  Identities=15%  Similarity=0.076  Sum_probs=60.5

Q ss_pred             HHHHHHHHHHHHHHHHhcccchhhHHHhh-chHHHHHHHHHHHHhccccceecccchhhHHHHHHHHHHHHHHHH
Q 043160           79 LGLFEPVIGQNLYFTGLKCSTATFTVAMC-NILPALTFLMAWIFRLEKVKIKSMRSQAKILGTIVTAGGAMCMTL  152 (333)
Q Consensus        79 ~g~~~~~~~~~~~~~al~~~~~~~~~~l~-~~~pi~~~ll~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~  152 (333)
                      ..+...+.+.+++..++++.|.+.+..+. ...-+.+.+++.+++||++|..+      ++|+.+.++|++.+-.
T Consensus        35 ~~i~~~~~sf~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~~~------~~gi~lIi~GVi~l~l  103 (120)
T PRK10452         35 LMLVMISLSYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLMK------IAGLTTLVAGIVLIKS  103 (120)
T ss_pred             HHHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHH------HHHHHHHHHHHHHhhc
Confidence            34555588999999999999999999885 69999999999999999999997      9999999999988753

>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]

Probab=97.71  E-value=0.0002  Score=52.46  Aligned_cols=67  Identities=18%  Similarity=0.137  Sum_probs=59.0

Q ss_pred             HHHHHHHHHHHHHHHHhcccchhhHHHh-hchHHHHHHHHHHHHhccccceecccchhhHHHHHHHHHHHHHHH
Q 043160           79 LGLFEPVIGQNLYFTGLKCSTATFTVAM-CNILPALTFLMAWIFRLEKVKIKSMRSQAKILGTIVTAGGAMCMT  151 (333)
Q Consensus        79 ~g~~~~~~~~~~~~~al~~~~~~~~~~l-~~~~pi~~~ll~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~  151 (333)
                      ....+...++.++-.++++.|.+.+..+ .....+.+++.+++++||+++..+      ++++.+.++|++.+-
T Consensus        35 l~~v~~~~sf~~Ls~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~~~~------~~gl~LiiaGvi~Lk  102 (106)
T COG2076          35 LTIVGYGLSFYLLSLALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLSLIK------LLGLALILAGVIGLK  102 (106)
T ss_pred             HHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCCHHH------HHHHHHHHHHHHHhh
Confidence            3344458889999999999999998866 679999999999999999999997      999999999999864

>PRK09541 emrE multidrug efflux protein; Reviewed

Probab=97.71  E-value=0.00023  Score=53.19  Aligned_cols=66  Identities=15%  Similarity=0.260  Sum_probs=59.3

Q ss_pred             HHHHHHHHHHHHHHHhcccchhhHHHh-hchHHHHHHHHHHHHhccccceecccchhhHHHHHHHHHHHHHHH
Q 043160           80 GLFEPVIGQNLYFTGLKCSTATFTVAM-CNILPALTFLMAWIFRLEKVKIKSMRSQAKILGTIVTAGGAMCMT  151 (333)
Q Consensus        80 g~~~~~~~~~~~~~al~~~~~~~~~~l-~~~~pi~~~ll~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~  151 (333)
                      .+.....+..++..++++.|.+.+..+ .....+.+.+++++++||++|..+      ++|+.+.++|++++-
T Consensus        36 ~~~~~~~sf~~l~~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~~~~~------~~gi~lIi~GVi~l~  102 (110)
T PRK09541         36 TIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPA------IIGMMLICAGVLVIN  102 (110)
T ss_pred             HHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHH------HHHHHHHHHHHHHHh
Confidence            455558889999999999999999987 568999999999999999999997      999999999999985

>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]

Probab=97.59  E-value=0.00024  Score=63.11  Aligned_cols=137  Identities=12%  Similarity=0.187  Sum_probs=112.7

Q ss_pred             ccHHHHHHHHHHHHHHHHHHHHHHHH---hcCCCHHHHHHHHHHHHHHHHH-HHHHHHhhcCC---C--CCCHHHHHHHH
Q 043160            7 HAKPYLGVIFMQFCSSIMSIITKIAL---TQGMSQHVLVAYRMVVATSLIA-PFAIVLERKTR---P--KMTFRIFAKIA   77 (333)
Q Consensus         7 ~~~~~l~~~~~~~~~~~~~~~~k~~l---~~~~~~~~~~~~r~~~~~~~l~-~~~~~~~~~~~---~--~~~~~~~~~~~   77 (333)
                      ...|+..++.+.+..+...++.|..+   .+++++.....+.--++...++ |+....+....   .  ..+.. .....
T Consensus       161 n~~G~i~a~~s~~~~al~~I~~~~ll~~~~~~~~~~~ll~y~ap~s~~~Ll~P~~~~~~~~~~~~~~~~~~~~~-~~~~~  239 (316)
T KOG1441|consen  161 NLFGFISAMISNLAFALRNILSKKLLTSKGESLNSMNLLYYTAPISLIFLLIPFLDYVEGNKFVGFLTAPWFVT-FLILL  239 (316)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCchHHHHHhhhHHHHHHhcchHhhhcccceeeeeccccchh-hHHHH
Confidence            45799999999999999999999997   3468999999888888888888 88776555443   1  22333 33334


Q ss_pred             HHHHHHHHHHHHHHHHHhcccchhhHHHhhchHHHHHHHHHHHHhccccceecccchhhHHHHHHHHHHHHHHH
Q 043160           78 LLGLFEPVIGQNLYFTGLKCSTATFTVAMCNILPALTFLMAWIFRLEKVKIKSMRSQAKILGTIVTAGGAMCMT  151 (333)
Q Consensus        78 ~~g~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~ll~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~  151 (333)
                      +.+++. ...|...|..+.++++-.-++....--+++...++++++|++|..+      ..|..++++|+.+-.
T Consensus       240 ~~sv~~-f~~Nls~f~~ig~tSalT~~V~g~~K~~~vi~~s~~iF~~pvt~~n------~~G~~iai~Gv~~Y~  306 (316)
T KOG1441|consen  240 LNSVLA-FLLNLSAFLVIGRTSALTYSVAGHMKRIVVIVVSWLIFGNPVTFLN------ALGYAIAILGVFLYS  306 (316)
T ss_pred             HHHHHH-HHHHHHHHHHHcccCchhhhhhccceEEEEEEeEeeeecCCCchhh------HHHHHHHHHHHHHHH
Confidence            444666 7788899999999999999999999999999999999999999998      999999999999954

>PRK11431 multidrug efflux system protein; Provisional

Probab=97.58  E-value=0.00041  Score=51.34  Aligned_cols=65  Identities=11%  Similarity=0.082  Sum_probs=58.2

Q ss_pred             HHHHHHHHHHHHHHhcccchhhHHHh-hchHHHHHHHHHHHHhccccceecccchhhHHHHHHHHHHHHHHH
Q 043160           81 LFEPVIGQNLYFTGLKCSTATFTVAM-CNILPALTFLMAWIFRLEKVKIKSMRSQAKILGTIVTAGGAMCMT  151 (333)
Q Consensus        81 ~~~~~~~~~~~~~al~~~~~~~~~~l-~~~~pi~~~ll~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~  151 (333)
                      +.+...++++...++++.|.+.+..+ .....+.+.+.+.+++||++|..+      ++++.+.++|++.+-
T Consensus        36 i~~~~~sf~~Ls~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~~~~------~~gi~lIi~GVv~l~  101 (105)
T PRK11431         36 VTAMIVSMALLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESASPAR------LLSLALIVAGIIGLK  101 (105)
T ss_pred             HHHHHHHHHHHHHHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCCHHH------HHHHHHHHHHHHhhh
Confidence            44458889999999999999998876 558999999999999999999997      999999999999864

>PRK10650 multidrug efflux system protein MdtI; Provisional

Probab=97.58  E-value=0.0007  Score=50.38  Aligned_cols=64  Identities=11%  Similarity=0.178  Sum_probs=55.0

Q ss_pred             HHHHHHHHHHHHHHhhcCcee-eeeccchhHHHHHHHHHHHhccccchhhhHHHHHHHhhhhhhe
Q 043160          260 FVSCTAYFIMGWLMKRKGPVF-VSSFNPLSMVIIAILGSFFIAEELFLGRIVGAIVIVIGLYMVL  323 (333)
Q Consensus       260 ~~~~~~~~~~~~a~~~~~~~~-~~~~~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~~~~~  323 (333)
                      +...+++++...++|+.|.+. .++..-+..+.+.+.+++++||++++.+++|+++|+.|++..+
T Consensus        43 ~~~~~sf~~Ls~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~~~~~~gi~lIi~GVi~lk  107 (109)
T PRK10650         43 AAVLAAFSALSQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNRKGWIGLVLLLAGMVMIK  107 (109)
T ss_pred             HHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhc
Confidence            337888999999999988844 4566667888899999999999999999999999999998764

>COG3238 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=97.54  E-value=0.00094  Score=52.28  Aligned_cols=140  Identities=15%  Similarity=0.084  Sum_probs=98.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhhCCCchHHHHHHHHHHHHHHHHHHHhhccCCccceeeccchhHHHHHHHHHHHHH
Q 043160          185 KGALMIAAGCFSWSCFIILEAFLLKSYPAELSLTALMCFVSSVEGTILALAIERGNTGIWLLHFDAKLLSVLYGGFVSCT  264 (333)
Q Consensus       185 ~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  264 (333)
                      ...+.+++++.+-.+......++.+..++|....+..+..+.+.+..+.++.++  ..++.......|+... -|+++.+
T Consensus         5 l~ll~~i~aG~~l~~Q~~iN~qL~~~~~spl~As~isf~vGt~~L~~l~l~~~~--~~~~a~~~~~pwW~~~-GG~lGa~   81 (150)
T COG3238           5 LYLLFAILAGALLPLQAAINGRLARYLGSPLLASLISFLVGTVLLLILLLIKQG--HPGLAAVASAPWWAWI-GGLLGAI   81 (150)
T ss_pred             HHHHHHHHHhhhhhhHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHhcC--CCchhhccCCchHHHH-ccchhhh
Confidence            566788889999999999999988888889999999999999988888877443  3333222223344443 3555555


Q ss_pred             HHHHHHHHHhhcCce-eeeeccchhHHHHHHHHHHHhc----cccchhhhHHHHHHHhhhhhheecCC
Q 043160          265 AYFIMGWLMKRKGPV-FVSSFNPLSMVIIAILGSFFIA----EELFLGRIVGAIVIVIGLYMVLWGRS  327 (333)
Q Consensus       265 ~~~~~~~a~~~~~~~-~~~~~~~~~pv~~~~~~~~~~~----e~~~~~~~~G~~li~~g~~~~~~~~~  327 (333)
                      --+.......+.+++ .....-.-+.+.+.+.+.+=+.    .+++..++.|++++++|+++..++++
T Consensus        82 ~vt~s~~l~p~lGa~~t~~l~i~gQli~glliD~fG~~g~~~~~~~~~r~lgi~L~l~gil~~~~~~~  149 (150)
T COG3238          82 FVTSSILLAPRLGAATTIALVIAGQLIMGLLIDHFGWFGVPKRPLNLPRILGILLVLAGILLARRFGA  149 (150)
T ss_pred             hhhhhHHhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCcCCCCHHHHHHHHHHHHHHHHhccccc
Confidence            445555566666653 4444555677778887776443    45999999999999999766665543

>PRK11431 multidrug efflux system protein; Provisional

Probab=97.54  E-value=0.0003  Score=52.03  Aligned_cols=65  Identities=18%  Similarity=0.246  Sum_probs=56.3

Q ss_pred             HHHHHHHHHHHHHhhcCcee-eeeccchhHHHHHHHHHHHhccccchhhhHHHHHHHhhhhhheec
Q 043160          261 VSCTAYFIMGWLMKRKGPVF-VSSFNPLSMVIIAILGSFFIAEELFLGRIVGAIVIVIGLYMVLWG  325 (333)
Q Consensus       261 ~~~~~~~~~~~a~~~~~~~~-~~~~~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~~~~~~~  325 (333)
                      +...++++...++|+.|.+. .++..-+..+.+.+.+++++||++++.+++|++++++|++..+..
T Consensus        38 ~~~~sf~~Ls~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~~~~~~gi~lIi~GVv~l~l~  103 (105)
T PRK11431         38 AMIVSMALLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESASPARLLSLALIVAGIIGLKLS  103 (105)
T ss_pred             HHHHHHHHHHHHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhhhcc
Confidence            37888999999999988744 466666888999999999999999999999999999999987644

>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]

Probab=97.51  E-value=0.00023  Score=52.14  Aligned_cols=67  Identities=16%  Similarity=0.284  Sum_probs=57.8

Q ss_pred             HHHHHHHHHHHHHHhhcCce-eeeeccchhHHHHHHHHHHHhccccchhhhHHHHHHHhhhhhheecC
Q 043160          260 FVSCTAYFIMGWLMKRKGPV-FVSSFNPLSMVIIAILGSFFIAEELFLGRIVGAIVIVIGLYMVLWGR  326 (333)
Q Consensus       260 ~~~~~~~~~~~~a~~~~~~~-~~~~~~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~~~~~~~~  326 (333)
                      ++...++.+...++|+.+.+ ..++..-+..+.+.+.++++|||+.++.+++|..++++|++..+...
T Consensus        38 v~~~~sf~~Ls~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~~~~~~gl~LiiaGvi~Lk~~s  105 (106)
T COG2076          38 VGYGLSFYLLSLALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLSLIKLLGLALILAGVIGLKLGS  105 (106)
T ss_pred             HHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHHHHHhhhcC
Confidence            33778899999999998874 45677778889999999999999999999999999999999877654

>KOG2765 consensus Predicted membrane protein [Function unknown]

Probab=97.24  E-value=0.0026  Score=56.79  Aligned_cols=142  Identities=11%  Similarity=0.136  Sum_probs=114.0

Q ss_pred             cccHHHHHHHHHHHHHHHHHHHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHHHHHhh---cCCCCCCHHHHHHHHHH
Q 043160            6 HHAKPYLGVIFMQFCSSIMSIITKIALTQ---GMSQHVLVAYRMVVATSLIAPFAIVLER---KTRPKMTFRIFAKIALL   79 (333)
Q Consensus         6 ~~~~~~l~~~~~~~~~~~~~~~~k~~l~~---~~~~~~~~~~r~~~~~~~l~~~~~~~~~---~~~~~~~~~~~~~~~~~   79 (333)
                      |...|-++.+++++++|...++.|.-..+   .++-..+..+-.++..++++|..+....   ++.+-++..+...++..
T Consensus       244 ~~llG~llaL~sA~~YavY~vllk~~~~~eg~rvdi~lffGfvGLfnllllwP~l~iL~~~~~e~F~lP~~~q~~~vv~~  323 (416)
T KOG2765|consen  244 RPLLGNLLALLSALLYAVYTVLLKRKIGDEGERVDIQLFFGFVGLFNLLLLWPPLIILDFFGEERFELPSSTQFSLVVFN  323 (416)
T ss_pred             chhHHHHHHHHHHHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHHHhHHHHHHHHhccCcccCCCCceeEeeeHh
Confidence            56789999999999999999999987432   3666666677788888888877665433   22233344556678888


Q ss_pred             HHHHHHHHHHHHHHHhcccchhhHHHhhchHHHHHHHHHHHHhccccceecccchhhHHHHHHHHHHHHHHHHh
Q 043160           80 GLFEPVIGQNLYFTGLKCSTATFTVAMCNILPALTFLMAWIFRLEKVKIKSMRSQAKILGTIVTAGGAMCMTLL  153 (333)
Q Consensus        80 g~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~ll~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~  153 (333)
                      +.++.+++.+++..|.-.+++-.+++-..++.....+.-.++.+.+++...      ++|.+.+++|-+++...
T Consensus       324 ~ligtvvSDylW~~a~~lTs~Lv~TlgmSltIPLA~~aD~l~k~~~~S~~~------iiGsi~Ifv~Fv~vn~~  391 (416)
T KOG2765|consen  324 NLIGTVVSDYLWAKAVLLTSPLVVTLGMSLTIPLAMFADVLIKGKHPSALY------IIGSIPIFVGFVIVNIS  391 (416)
T ss_pred             hHHHHHHHHHHHHHHHHhccchhheeeeeEeeeHHHHHHHHHcCCCCCHHH------HHHHHHHHHHHhheecc
Confidence            999999999999999999999999998887777788888888788888886      99999999999988743

>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function

Probab=97.19  E-value=0.0044  Score=53.43  Aligned_cols=185  Identities=9%  Similarity=0.041  Sum_probs=115.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 043160           10 PYLGVIFMQFCSSIMSIITKIALTQGMSQHVLVAYRMVVATSLIAPFAIVLERKTRPKMTFRIFAKIALLGLFEPVIGQN   89 (333)
Q Consensus        10 ~~l~~~~~~~~~~~~~~~~k~~l~~~~~~~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~   89 (333)
                      |+++.+++.+++|.+++-.|.. +. -|++.+-++.+....+.-+.+...+..   |    +..++.++.|.+. +.++.
T Consensus         1 G~~a~~va~~~fGs~~vPvK~~-~~-gDg~~fQw~~~~~i~~~g~~v~~~~~~---p----~f~p~amlgG~lW-~~gN~   70 (254)
T PF07857_consen    1 GYIACIVAVLFFGSNFVPVKKF-DT-GDGFFFQWVMCSGIFLVGLVVNLILGF---P----PFYPWAMLGGALW-ATGNI   70 (254)
T ss_pred             CchhHHHHHHHhcccceeeEec-cC-CCcHHHHHHHHHHHHHHHHHHHHhcCC---C----cceeHHHhhhhhh-hcCce
Confidence            5678899999999999999988 44 578877777666555555544433221   2    2345567777887 99999


Q ss_pred             HHHHHhcccchhhHHHhhchHHHHHH-HHHHH-HhccccceecccchhhHHHHHHHHHHHHHHHHhcCCcccCC--ch--
Q 043160           90 LYFTGLKCSTATFTVAMCNILPALTF-LMAWI-FRLEKVKIKSMRSQAKILGTIVTAGGAMCMTLLKGPILEFP--WK--  163 (333)
Q Consensus        90 ~~~~al~~~~~~~~~~l~~~~pi~~~-ll~~~-~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~--~~--  163 (333)
                      +-.-.++....+....+.++.-+.+- ..+++ +++++...- ..+....+|++++++|..+..+-+.++.+..  .+  
T Consensus        71 ~~vpii~~iGLglg~liW~s~n~l~Gw~~grfGlFg~~~~~~-~~~~Ln~~G~~l~~~~~~~f~fik~~~~~~~~~~~~~  149 (254)
T PF07857_consen   71 LVVPIIKTIGLGLGMLIWGSVNCLTGWASGRFGLFGLDPQVP-SSPWLNYIGVALVLVSGIIFSFIKSEEKEPKKSSEET  149 (254)
T ss_pred             eehhHhhhhhhHHHHHHHHHHHHHHHHHHhhceecccccccc-chhHHHHHHHHHHHHHHHheeeecCCCCCcccccccc
Confidence            99999999999999999776555443 33333 344433322 2345568899999999888755432221100  00  


Q ss_pred             --hhh-hhcccCC----CCC------CCcchhhHHHHHHHHHHHHHHHHHHHHHHH
Q 043160          164 --QVR-ILHNQSE----TGT------HNKEEHITKGALMIAAGCFSWSCFIILEAF  206 (333)
Q Consensus       164 --~~~-~~~~~~~----~~~------~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~  206 (333)
                        ..+ .++.+++    .++      +.. ++...|..+++.+++.|+...+=...
T Consensus       150 ~~~~~~~~~~~~~~~~~~~~S~vd~l~~~-~~RivG~~LAv~aGvlyGs~fvPv~Y  204 (254)
T PF07857_consen  150 PLSIEDVIEIEDDSENSEDSSWVDELSPR-KKRIVGIILAVFAGVLYGSNFVPVIY  204 (254)
T ss_pred             ccccccccccccccccccccccccccccc-cchhHhHHHHHHHHHHHhcccchHHH
Confidence              000 0000000    000      112 25778999999999999987654444

The region concerned is approximately 280 residues long.

>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles

Probab=97.19  E-value=0.0011  Score=57.35  Aligned_cols=79  Identities=10%  Similarity=0.151  Sum_probs=71.1

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHhhcCceeeeeccchhHHHHHHHHHHHhccccchhhhHHHHHHHhhhhhheecCCC
Q 043160          250 AKLLSVLYGGFVSCTAYFIMGWLMKRKGPVFVSSFNPLSMVIIAILGSFFIAEELFLGRIVGAIVIVIGLYMVLWGRSK  328 (333)
Q Consensus       250 ~~~~~l~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~~~~~~~~~~  328 (333)
                      ........-+++..+...+.+.++++.+|+...++...+.+++.++++++++++++..||.+..+.++|+.+.......
T Consensus        15 ~~~~~~~vPA~lY~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~qW~aL~lL~~Gv~lv~~~~~~   93 (244)
T PF04142_consen   15 KDTLKLAVPALLYAIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSRRQWLALFLLVAGVVLVQLSSSQ   93 (244)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHheeecCCcc
Confidence            3455666778888899999999999999999999999999999999999999999999999999999999998865543

P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane

>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins

Probab=97.14  E-value=0.0031  Score=45.76  Aligned_cols=57  Identities=14%  Similarity=0.039  Sum_probs=35.4

Q ss_pred             HHHHHHHHHHHHHHHhcccchhhHHHh-hchHHHHHHHHHHHHhccccceecccchhhHHHHHH
Q 043160           80 GLFEPVIGQNLYFTGLKCSTATFTVAM-CNILPALTFLMAWIFRLEKVKIKSMRSQAKILGTIV  142 (333)
Q Consensus        80 g~~~~~~~~~~~~~al~~~~~~~~~~l-~~~~pi~~~ll~~~~~~e~~~~~~~~~~~~~~g~~l  142 (333)
                      .+.....+..++..++++.|.+.+..+ ..+..+.+.+.+.+++||++|..+      +.|+.+
T Consensus        35 ~~~~~~~s~~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s~~~------~~gi~l   92 (93)
T PF00893_consen   35 AVVGYGLSFYFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLSLSK------WLGIGL   92 (93)
T ss_dssp             HHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH--------------HHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHH------Hhheee
Confidence            344558889999999999999999876 469999999999999999999997      988876

They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.

>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins

Probab=97.13  E-value=0.0024  Score=46.35  Aligned_cols=55  Identities=20%  Similarity=0.389  Sum_probs=34.4

Q ss_pred             HHHHHHHHHHHHHhhcCceee-eeccchhHHHHHHHHHHHhccccchhhhHHHHHH
Q 043160          261 VSCTAYFIMGWLMKRKGPVFV-SSFNPLSMVIIAILGSFFIAEELFLGRIVGAIVI  315 (333)
Q Consensus       261 ~~~~~~~~~~~a~~~~~~~~~-~~~~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li  315 (333)
                      +.+.++.++.+++|+.+.+.+ .+..-+..+...+.+.+++||++|+.+++|+.+|
T Consensus        38 ~~~~s~~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s~~~~~gi~lI   93 (93)
T PF00893_consen   38 GYGLSFYFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLSLSKWLGIGLI   93 (93)
T ss_dssp             HHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH--------HHHHHHH
T ss_pred             HHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHhheeeC
Confidence            378888999999999998777 4556688999999999999999999999999876

They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.

>PRK13499 rhamnose-proton symporter; Provisional

Probab=97.06  E-value=0.036  Score=50.09  Aligned_cols=145  Identities=14%  Similarity=0.083  Sum_probs=91.8

Q ss_pred             cccHHHHHHHHHHHHHHHHH-------HHHHHHHhcCCCHHHHHHHHHH---HHHHHHH-HHHHHH--hhcCC-----CC
Q 043160            6 HHAKPYLGVIFMQFCSSIMS-------IITKIALTQGMSQHVLVAYRMV---VATSLIA-PFAIVL--ERKTR-----PK   67 (333)
Q Consensus         6 ~~~~~~l~~~~~~~~~~~~~-------~~~k~~l~~~~~~~~~~~~r~~---~~~~~l~-~~~~~~--~~~~~-----~~   67 (333)
                      +..||++.++++.+..+..+       +..+.+...+.++.....-.+.   ++..+.- .++.++  +++..     ++
T Consensus       171 ~~~KGi~ialisgi~~~~f~~~~~~~~~~~~~a~~~g~~~~~~~lp~~~~~~~G~~~~n~~~~~~~~~k~~~~~~~~~~~  250 (345)
T PRK13499        171 NLKKGLILAVMSGIFSACFSFAMDAGKPMHEAAAALGVDPLYAALPSYVVIMGGGAITNLGFCFIRLAKNKDLSLKADFS  250 (345)
T ss_pred             chHhHHHHHHHHHHHHHHHHHHHhhccchhhhhhhcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCcccchhcc
Confidence            45799999999999999998       6666543346666655544443   3333332 222222  11111     11


Q ss_pred             CCHHHHHHH----HHHHHHHHHHHHHHHHHHhcccchhhHHH---hh-chHHHHHHHHHHHHhccccceecccchhhHHH
Q 043160           68 MTFRIFAKI----ALLGLFEPVIGQNLYFTGLKCSTATFTVA---MC-NILPALTFLMAWIFRLEKVKIKSMRSQAKILG  139 (333)
Q Consensus        68 ~~~~~~~~~----~~~g~~~~~~~~~~~~~al~~~~~~~~~~---l~-~~~pi~~~ll~~~~~~e~~~~~~~~~~~~~~g  139 (333)
                      .+++.+.+-    .+.|++. ..++.++..+-+..+.+.+..   +. ++..++..+-+. ++||+=+..++..+.-++|
T Consensus       251 ~~~~~~~~n~l~~~l~G~~W-~~~~~~y~~~~~~~g~~~~~~sw~l~m~~~ViistlwGi-~lkE~K~a~~k~~~~l~~G  328 (345)
T PRK13499        251 LAKPLLITNVLLSALAGVMW-YLQFFFYAMGHSKLGAQYDFVSWMLHMSFYVLCGNLWGL-VLKEWKGASRRPVRVLSLG  328 (345)
T ss_pred             ccchhHHHHHHHHHHHHHHH-HHHHHHHHHHHHHcCCccchHHHHHhccHHHHHHHHhhh-hhhhccCCCccchhHHHHH
Confidence            121222333    6666676 888888888888876665555   65 555566677777 5899988545556666889


Q ss_pred             HHHHHHHHHHHHH
Q 043160          140 TIVTAGGAMCMTL  152 (333)
Q Consensus       140 ~~l~~~Gv~li~~  152 (333)
                      +++.+.|..++.+
T Consensus       329 ~vliI~g~~lig~  341 (345)
T PRK13499        329 CVVIILAANIVGL  341 (345)
T ss_pred             HHHHHHHHHHHhh
Confidence            9999999988763

>COG3238 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=96.93  E-value=0.026  Score=44.31  Aligned_cols=137  Identities=14%  Similarity=0.007  Sum_probs=88.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhcCC-CHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHH
Q 043160            9 KPYLGVIFMQFCSSIMSIITKIALTQGM-SQHVLVAYRMVVATSLIAPFAIVLERKTRPKMTFRIFAKIALLGLFEPVIG   87 (333)
Q Consensus         9 ~~~l~~~~~~~~~~~~~~~~k~~l~~~~-~~~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~   87 (333)
                      ...+..+.+..+-.....++-.. .+.. +|....+..+..+...+..+.+...++......++..+|....|+++ +..
T Consensus         5 l~ll~~i~aG~~l~~Q~~iN~qL-~~~~~spl~As~isf~vGt~~L~~l~l~~~~~~~~a~~~~~pwW~~~GG~lG-a~~   82 (150)
T COG3238           5 LYLLFAILAGALLPLQAAINGRL-ARYLGSPLLASLISFLVGTVLLLILLLIKQGHPGLAAVASAPWWAWIGGLLG-AIF   82 (150)
T ss_pred             HHHHHHHHHhhhhhhHHHHHHHH-HHHcCChHHHHHHHHHHHHHHHHHHHHHhcCCCchhhccCCchHHHHccchh-hhh
Confidence            45666677777777766666666 3444 48888899999988888888777444333332344466677778777 777


Q ss_pred             HHHHHHHhcccchhhHHHhh-chHHHHHHHHHHHH-hccccceecccchhhHHHHHHHHHHHHHH
Q 043160           88 QNLYFTGLKCSTATFTVAMC-NILPALTFLMAWIF-RLEKVKIKSMRSQAKILGTIVTAGGAMCM  150 (333)
Q Consensus        88 ~~~~~~al~~~~~~~~~~l~-~~~pi~~~ll~~~~-~~e~~~~~~~~~~~~~~g~~l~~~Gv~li  150 (333)
                      -+.......+..++....+. .-+-+...++-.+= ++++   +++....|++|+++.++|+.++
T Consensus        83 vt~s~~l~p~lGa~~t~~l~i~gQli~glliD~fG~~g~~---~~~~~~~r~lgi~L~l~gil~~  144 (150)
T COG3238          83 VTSSILLAPRLGAATTIALVIAGQLIMGLLIDHFGWFGVP---KRPLNLPRILGILLVLAGILLA  144 (150)
T ss_pred             hhhhHHhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCC---cCCCCHHHHHHHHHHHHHHHHh
Confidence            77777788888777666553 33444444443322 2222   2233455699999999995554

>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]

Probab=96.89  E-value=0.0012  Score=55.49  Aligned_cols=134  Identities=13%  Similarity=0.074  Sum_probs=92.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhhCCCchHHHHHHHHHHHHHHHHHHHhhccCCccceeeccchhHHHHHHHHHHHHHH
Q 043160          186 GALMIAAGCFSWSCFIILEAFLLKSYPAELSLTALMCFVSSVEGTILALAIERGNTGIWLLHFDAKLLSVLYGGFVSCTA  265 (333)
Q Consensus       186 G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  265 (333)
                      ..+.+++-++.|+.......|.   -++|...+--+.+-+.++.....++ .. +..     ....+..-...|++-.++
T Consensus         3 ~~liaL~P~l~WGsip~v~~k~---GG~p~qQ~lGtT~GALifaiiv~~~-~~-p~~-----T~~~~iv~~isG~~Ws~G   72 (288)
T COG4975           3 DLLIALLPALGWGSIPLVANKF---GGKPYQQTLGTTLGALIFAIIVFLF-VS-PEL-----TLTIFIVGFISGAFWSFG   72 (288)
T ss_pred             hHHHHHHHHHHhcccceeeeec---CCChhHhhhhccHHHHHHHHHHhee-ec-Ccc-----chhhHHHHHHhhhHhhhh
Confidence            4678888899999876664332   2245544444444444444444433 22 111     223455555567777788


Q ss_pred             HHHHHHHHhhcCceeeeeccch-hHHHHHHHHHHHhccccchhhh----HHHHHHHhhhhhheecCCCC
Q 043160          266 YFIMGWLMKRKGPVFVSSFNPL-SMVIIAILGSFFIAEELFLGRI----VGAIVIVIGLYMVLWGRSKD  329 (333)
Q Consensus       266 ~~~~~~a~~~~~~~~~~~~~~~-~pv~~~~~~~~~~~e~~~~~~~----~G~~li~~g~~~~~~~~~~~  329 (333)
                      +..++++.+..+.+++.++..- +.+-+.+++++.|||..+..+.    +..++++.|+++..++++.+
T Consensus        73 Q~~Qfka~~~iGVSkamPiStG~QLVg~sL~gV~~f~EW~t~~~~IlG~iAliliviG~~lTs~~~~~n  141 (288)
T COG4975          73 QANQFKAIQLIGVSKAMPISTGMQLVGTSLFGVFVFHEWTTPTQIILGFIALILIVIGIYLTSKQDRNN  141 (288)
T ss_pred             hhhhhhheeeeeeeccccccchhhHhhceeeeEEEEeccCcchhHHHHHHHHHHHHHhheEeeeecccc
Confidence            9999999999999999998764 6777889999999999888765    45778889999999887643

>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function

Probab=96.44  E-value=0.011  Score=44.12  Aligned_cols=108  Identities=13%  Similarity=0.090  Sum_probs=77.3

Q ss_pred             HHHHHHHHHHHHHHHHhhhCCCchHHHHHHHHHHHHHHHHHHHhhccCCccceeeccchhHHHHHHHHHH-HHHHHHHHH
Q 043160          192 AGCFSWSCFIILEAFLLKSYPAELSLTALMCFVSSVEGTILALAIERGNTGIWLLHFDAKLLSVLYGGFV-SCTAYFIMG  270 (333)
Q Consensus       192 ~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~  270 (333)
                      +.+++|++.+-+.|+..+..+++....  +.......     +.              ..|-+.  ..+. ...+...|+
T Consensus         3 ~Vg~~WG~Tnpfik~g~~~~~~~~~~~--~~~~~~~~-----Ll--------------~n~~y~--ipf~lNq~GSv~f~   59 (113)
T PF10639_consen    3 LVGILWGCTNPFIKRGSSGLEKVKASL--QLLQEIKF-----LL--------------LNPKYI--IPFLLNQSGSVLFF   59 (113)
T ss_pred             eehHHhcCchHHHHHHHhhcCCccchH--HHHHHHHH-----HH--------------HhHHHH--HHHHHHHHHHHHHH
Confidence            457889999999999888775433220  11111111     00              112222  2444 778888999


Q ss_pred             HHHhhcCceeeeec-cchhHHHHHHHHHHHhccccchhhhHHHHHHHhhhhhh
Q 043160          271 WLMKRKGPVFVSSF-NPLSMVIIAILGSFFIAEELFLGRIVGAIVIVIGLYMV  322 (333)
Q Consensus       271 ~a~~~~~~~~~~~~-~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~~~~  322 (333)
                      +.+.+.+.+.+.++ +.+.-+++.+.++++.+|..++..++|+.++++|+.+.
T Consensus        60 ~~L~~~dlSlavPi~Nsl~fvfT~l~g~~lge~~~~~~~~~G~~Li~~Gv~Lc  112 (113)
T PF10639_consen   60 LLLGSADLSLAVPIANSLAFVFTALTGWLLGEEVISRRTWLGMALILAGVALC  112 (113)
T ss_pred             HHHhcCCceeeehHHhHHHHHHHHHHHHHhcCcccchhHHHHHHHHHcCeeee
Confidence            99999999999999 59999999999987777778889999999999998653

Many members are annotated as potential transmembrane proteins.

>TIGR00803 nst UDP-galactose transporter

Probab=96.30  E-value=0.017  Score=49.20  Aligned_cols=62  Identities=18%  Similarity=0.082  Sum_probs=55.2

Q ss_pred             HHHHHHHHHHHHHHHhcccchhhHHHhhchHHHHHHHHHHHHhccccceecccchhhHHHHHHHHHHHH
Q 043160           80 GLFEPVIGQNLYFTGLKCSTATFTVAMCNILPALTFLMAWIFRLEKVKIKSMRSQAKILGTIVTAGGAM  148 (333)
Q Consensus        80 g~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~ll~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~  148 (333)
                      .+.+ +....+..+.+++.+....+....+.++++.+++.++++|+++..+      ++|+.+.+.|+.
T Consensus       159 ~~~~-a~~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~~~------~~g~~lV~~~~~  220 (222)
T TIGR00803       159 GLLN-VGGGLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISSTF------YLGAILVFLATF  220 (222)
T ss_pred             HHHH-HhcCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHH------HHHHHHHHeeeE
Confidence            3444 7778889999999999999999999999999999999999999997      999999888764

NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.

>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=96.13  E-value=0.088  Score=45.99  Aligned_cols=141  Identities=13%  Similarity=0.111  Sum_probs=110.9

Q ss_pred             ccccHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCHHHHHHHHHHHHHHHHHHHHHHHhhcCCC-----CCCHHHHHHHHH
Q 043160            5 YHHAKPYLGVIFMQFCSSIMSIITKIALTQ-GMSQHVLVAYRMVVATSLIAPFAIVLERKTRP-----KMTFRIFAKIAL   78 (333)
Q Consensus         5 ~~~~~~~l~~~~~~~~~~~~~~~~k~~l~~-~~~~~~~~~~r~~~~~~~l~~~~~~~~~~~~~-----~~~~~~~~~~~~   78 (333)
                      .+...|+.++....+.-|..+..-+..+.+ .+++..+.++-.++..+.-........ ..++     +..++.++-+++
T Consensus       168 ~ns~~G~~Ll~~~L~fDgfTn~tQd~lf~~~k~s~~~mM~~vNLf~~i~~~~~li~qg-~~~~av~F~~~hp~~~~Di~l  246 (327)
T KOG1581|consen  168 ENSPIGILLLFGYLLFDGFTNATQDSLFKKYKVSSLHMMFGVNLFSAILNGTYLILQG-HLLPAVSFIKEHPDVAFDILL  246 (327)
T ss_pred             CCchHhHHHHHHHHHHHhhHHhHHHHHhccCCccHhHHHHHHHHHHHHHHHHhhhcCC-CCchHHHHHHcChhHHHHHHH
Confidence            456789999999999888888887777633 588888888888887777665533222 1111     223456777899


Q ss_pred             HHHHHHHHHHHHHHHHhcccchhhHHHhhchHHHHHHHHHHHHhccccceecccchhhHHHHHHHHHHHHHHHHh
Q 043160           79 LGLFEPVIGQNLYFTGLKCSTATFTVAMCNILPALTFLMAWIFRLEKVKIKSMRSQAKILGTIVTAGGAMCMTLL  153 (333)
Q Consensus        79 ~g~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~ll~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~  153 (333)
                      .+.++ +.++.+.++-++.-++-.-+.+..+-=++..+++.+.++.+++..+      |+|+.+.+.|+.+=.+.
T Consensus       247 ~s~~g-avGQ~FI~~TI~~FGslt~t~I~ttRk~~si~lS~i~f~h~~s~~q------~~g~~iVFg~i~l~~~~  314 (327)
T KOG1581|consen  247 YSTCG-AVGQLFIFYTIERFGSLTFTTIMTTRKMVSIMLSCIVFGHPLSSEQ------WLGVLIVFGGIFLEILL  314 (327)
T ss_pred             HHHhh-hhhhheehhhHhhcccHHHHHHHHHHHHHHHHHHHHHhCCccchhh------ccCeeeehHHHHHHHHH
Confidence            99999 8889999988988888888888888999999999999999999997      99999999998886543

>KOG2922 consensus Uncharacterized conserved protein [Function unknown]

Probab=96.02  E-value=0.0049  Score=54.04  Aligned_cols=119  Identities=21%  Similarity=0.213  Sum_probs=92.6

Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCchHHHHHHHHHHHHHHHHHHHhhccCCccceeeccchhHHHHHHHHH
Q 043160          181 EHITKGALMIAAGCFSWSCFIILEAFLLKSYPAELSLTALMCFVSSVEGTILALAIERGNTGIWLLHFDAKLLSVLYGGF  260 (333)
Q Consensus       181 ~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  260 (333)
                      ++...|..+++.+.+.-+...++.||..++...                  ...-..+ +...+  .. +   ...+.|+
T Consensus        17 ~d~~~G~~LaissS~~Ig~sfilkKkgl~r~~~------------------~~~ra~~-gg~~y--l~-~---~~Ww~G~   71 (335)
T KOG2922|consen   17 SDNIIGLVLAISSSIFIGSSFILKKKGLKRAGA------------------SGLRAGE-GGYGY--LK-E---PLWWAGM   71 (335)
T ss_pred             cCceeeeeehhhccEEEeeehhhhHHHHHHHhh------------------hcccccC-CCcch--hh-h---HHHHHHH
Confidence            456689999999999999999998888777531                  0001111 11111  11 1   2335677


Q ss_pred             H-HHHHHHHHHHHHhhcCceeeeeccchhHHHHHHHHHHHhccccchhhhHHHHHHHhhhhhhee
Q 043160          261 V-SCTAYFIMGWLMKRKGPVFVSSFNPLSMVIIAILGSFFIAEELFLGRIVGAIVIVIGLYMVLW  324 (333)
Q Consensus       261 ~-~~~~~~~~~~a~~~~~~~~~~~~~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~~~~~~  324 (333)
                      + ..++-...+.+....+++.++++..++.+.+.+++..+++|++++...+|+++.++|-..+..
T Consensus        72 ltm~vGei~NFaAYaFAPasLVtPLGAlsvi~saila~~~L~Ekl~~~g~lGc~l~v~Gst~iV~  136 (335)
T KOG2922|consen   72 LTMIVGEIANFAAYAFAPASLVTPLGALSVIISAILASFFLKEKLNLLGILGCVLCVVGSTTIVI  136 (335)
T ss_pred             HHHHHHhHhhHHHHhhchHhhhccchhHHHHHHHHHHHHHHHHHHHHhhhhheeEEecccEEEEE
Confidence            7 889999999999999999999999999999999999999999999999999999999665554

>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]

Probab=95.98  E-value=0.48  Score=42.47  Aligned_cols=142  Identities=12%  Similarity=0.030  Sum_probs=94.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhhCC---CchHHHHHHHHHHHHHHHHHHHhhccC--C--cc---ceeeccchhHHH
Q 043160          185 KGALMIAAGCFSWSCFIILEAFLLKSYP---AELSLTALMCFVSSVEGTILALAIERG--N--TG---IWLLHFDAKLLS  254 (333)
Q Consensus       185 ~G~~~~l~a~~~~a~~~v~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~--~--~~---~~~~~~~~~~~~  254 (333)
                      .-.+..+...+-++......|...++.+   .|-+..+..-+.-.+.+....+.-++.  +  ..   ......+.+..-
T Consensus        15 ~k~~~l~~~t~~~~~l~l~l~ys~~~~~~~f~~tt~v~~~Ei~Kl~~c~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~lk   94 (345)
T KOG2234|consen   15 MKYLSLIVLTAQNTALTLLLRYSRTREKPMFLPTTAVFLTEVIKLVFCLFLLLFEERKYAKKSLKSLSKEILAAPRETLK   94 (345)
T ss_pred             HHHHHHHHHHHHHhhHHHHHHHHhcCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhhHHhhhhhhhcCHHHHhChHHHHH
Confidence            4444555555556666655666544432   234445555555555555555433210  0  00   111111223344


Q ss_pred             HHHHHHHHHHHHHHHHHHHhhcCceeeeeccchhHHHHHHHHHHHhccccchhhhHHHHHHHhhhhhheecC
Q 043160          255 VLYGGFVSCTAYFIMGWLMKRKGPVFVSSFNPLSMVIIAILGSFFIAEELFLGRIVGAIVIVIGLYMVLWGR  326 (333)
Q Consensus       255 l~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~~~~~~~~  326 (333)
                      +..-+++..+-..+++.++.+.+|+...+...+....+.++..+++++++++.||...++...|+...+.+.
T Consensus        95 ~~vPa~iYalqNnl~yval~~ldaatyqVt~qlKI~tTA~f~vl~L~rkLs~~Qw~Al~lL~~Gv~~vQ~~~  166 (345)
T KOG2234|consen   95 VSVPALIYALQNNLQYVALSNLDAATYQVTYQLKILTTAIFSVLILRRKLSRLQWMALVLLFAGVALVQLPS  166 (345)
T ss_pred             HHHHHHHHHHhhhHHHHHHhcCCchhhhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhccC
Confidence            445555666667799999999999999999999999999999999999999999999999999999998443

>KOG4831 consensus Unnamed protein [Function unknown]

Probab=95.82  E-value=0.023  Score=41.11  Aligned_cols=113  Identities=14%  Similarity=0.191  Sum_probs=73.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcCCCHH------HHHHHHHHHHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHHH
Q 043160           11 YLGVIFMQFCSSIMSIITKIALTQGMSQH------VLVAYRMVVATSLIAPFAIVLERKTRPKMTFRIFAKIALLGLFEP   84 (333)
Q Consensus        11 ~l~~~~~~~~~~~~~~~~k~~l~~~~~~~------~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~   84 (333)
                      ..-++...++||.++++.|.. +.+.+..      ...++|-....                -.+|+++.+ +++.    
T Consensus         5 ~~~lvaVgllWG~Tnplirrg-s~g~~~v~~~~~k~~~~lqe~~tl----------------~l~w~Y~iP-FllN----   62 (125)
T KOG4831|consen    5 MDKLVAVGLLWGATNPLIRRG-SLGWDKVKSSSRKIMIALQEMKTL----------------FLNWEYLIP-FLLN----   62 (125)
T ss_pred             HHHHHHHHHHHccccHHHHHH-HhhHhhccCchHHHHHHHHHHHHH----------------HHhHHHHHH-HHHH----
Confidence            345677889999999999988 4443322      22222221111                112333333 2233    


Q ss_pred             HHHHHHHHHHhcccchhhHHHhh-chHHHHHHHHHHHHhccccceecccchhhHHHHHHHHHHHHHHH
Q 043160           85 VIGQNLYFTGLKCSTATFTVAMC-NILPALTFLMAWIFRLEKVKIKSMRSQAKILGTIVTAGGAMCMT  151 (333)
Q Consensus        85 ~~~~~~~~~al~~~~~~~~~~l~-~~~pi~~~ll~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~  151 (333)
                      -.+..+||.-+++.|.+.+..+. ++.-.|+.+.+..+ ||+...+.     .++|..+.++|+.+..
T Consensus        63 qcgSaly~~tLa~a~islavpv~nsltfafta~~G~~L-GE~~~g~~-----a~lGt~liv~Gi~Lci  124 (125)
T KOG4831|consen   63 QCGSALYYLTLASAPISLAVPVTNSLTFAFTAIFGKAL-GEETQGGL-----ALLGTSLIVFGIWLCI  124 (125)
T ss_pred             HhhHHHHHHHHhcCCceeeeeecchhHHHHHHHHHHHh-ccccccce-----eehhhhHHhhhhhhee
Confidence            34477888899999999999884 57888888888877 55554433     3999999999988753

>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=95.21  E-value=0.15  Score=42.93  Aligned_cols=137  Identities=12%  Similarity=0.066  Sum_probs=94.8

Q ss_pred             ccHHHHHHHHHHHHHHHHHHHHHHHH-hcCCCHHHHHHHHHHHHHHHHHHHHHHHh-hcCC----CCCCHHHHHHHHHHH
Q 043160            7 HAKPYLGVIFMQFCSSIMSIITKIAL-TQGMSQHVLVAYRMVVATSLIAPFAIVLE-RKTR----PKMTFRIFAKIALLG   80 (333)
Q Consensus         7 ~~~~~l~~~~~~~~~~~~~~~~k~~l-~~~~~~~~~~~~r~~~~~~~l~~~~~~~~-~~~~----~~~~~~~~~~~~~~g   80 (333)
                      ...|-++.+++...-|++...-...- +.+-+...+.++-.+-+.+.+-.-.++.. -+..    .+. ...++.+.+.+
T Consensus       170 ~g~GElLL~lSL~mDGlTg~~Qdrira~yq~~g~~MM~~~NlwStL~Lg~g~lfTGElweF~yF~~Rh-P~~~~~l~l~a  248 (337)
T KOG1580|consen  170 FGFGELLLILSLAMDGLTGSIQDRIRASYQRTGTSMMFYTNLWSTLYLGAGLLFTGELWEFFYFVQRH-PYVFWDLTLLA  248 (337)
T ss_pred             cchHHHHHHHHHHhcccchhHHHHHHHhhccCchhhHHHHHHHHHHHhhhhheehhhHHHHHHHHHhc-cHHHHHHHHHH
Confidence            34677888888888887777655441 11223333334444444444322211111 0000    011 24467788888


Q ss_pred             HHHHHHHHHHHHHHhcccchhhHHHhhchHHHHHHHHHHHHhccccceecccchhhHHHHHHHHHHHHHHH
Q 043160           81 LFEPVIGQNLYFTGLKCSTATFTVAMCNILPALTFLMAWIFRLEKVKIKSMRSQAKILGTIVTAGGAMCMT  151 (333)
Q Consensus        81 ~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~ll~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~  151 (333)
                      +++ ++++++.+.-..+-++-..+++..+--.|+.+.+.++++.+++.+|      |+|.++.+.|...=.
T Consensus       249 i~s-~LGQ~fIF~tv~~FgPLtCSivTTTRKfFTil~SVllf~npls~rQ------wlgtvlVF~aL~~D~  312 (337)
T KOG1580|consen  249 IAS-CLGQWFIFKTVEEFGPLTCSIVTTTRKFFTILISVLLFNNPLSGRQ------WLGTVLVFSALTADV  312 (337)
T ss_pred             HHH-HhhhHHHHHHHHHhCCeeEEEEeehHHHHHHHHHHHHhcCcCcHHH------HHHHHHHHHHhhhHh
Confidence            888 9999999999999999999999999999999999999999999997      999999998877643

>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]

Probab=94.91  E-value=0.33  Score=42.83  Aligned_cols=137  Identities=12%  Similarity=0.117  Sum_probs=105.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHHHHhhcC-----CC-CCCHHHHHHHHHHHH
Q 043160            9 KPYLGVIFMQFCSSIMSIITKIALT-QGMSQHVLVAYRMVVATSLIAPFAIVLERKT-----RP-KMTFRIFAKIALLGL   81 (333)
Q Consensus         9 ~~~l~~~~~~~~~~~~~~~~k~~l~-~~~~~~~~~~~r~~~~~~~l~~~~~~~~~~~-----~~-~~~~~~~~~~~~~g~   81 (333)
                      .|+.++....+.-+...+..|+..+ .+.+-..+.++..+.+.+.+.......+...     .+ ......+....+.++
T Consensus       157 ~gY~w~~~n~~~~a~~~v~~kk~vd~~~l~~~~lv~yNnl~~L~~l~~~~~~~ge~~~l~~~~~~~~~~~~~~~~~lScv  236 (314)
T KOG1444|consen  157 RGYSWALANCLTTAAFVVYVKKSVDSANLNKFGLVFYNNLLSLPPLLILSFITGELDALSLNFDNWSDSSVLVVMLLSCV  236 (314)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHhhccccccceeEEeehhHHHHHHHHHHHHHhcchHHHHhhcccccchhHHHHHHHHHH
Confidence            4788888888888888888888753 3577788899999999888887765433211     11 112344666777788


Q ss_pred             HHHHHHHHHHHHHhcccchhhHHHhhchHHHHHHHHHHHHhccccceecccchhhHHHHHHHHHHHHHHHH
Q 043160           82 FEPVIGQNLYFTGLKCSTATFTVAMCNILPALTFLMAWIFRLEKVKIKSMRSQAKILGTIVTAGGAMCMTL  152 (333)
Q Consensus        82 ~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~ll~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~  152 (333)
                      ++ ..-+++.+++.+..++...++.....-..+.+...++.+++.++..      .+|+.++++|-++-.+
T Consensus       237 ~g-f~isy~s~~ct~~~SAtT~tivG~~n~l~t~l~~ll~~d~~~~~~n------~~gll~~~~ggv~Y~~  300 (314)
T KOG1444|consen  237 MG-FGISYTSFLCTRVNSATTTTIVGAKNKLLTYLGGLLFGDKPFTFLN------VIGLLVGFFGGVLYSY  300 (314)
T ss_pred             HH-HHHHHHHHHHHhhccccceeehhhhhhHHHHHHHHhcCCceechhh------hHHHHHHhhhhhHHhh
Confidence            87 7778888899999999988888877777788888888999999997      9999999999988654

>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]

Probab=94.79  E-value=0.015  Score=47.31  Aligned_cols=67  Identities=15%  Similarity=0.247  Sum_probs=60.6

Q ss_pred             HHHHHHHHHHHhhcCceeeeeccchhHHHHHHHHHHHhccccchhhhHHHHHHHhhhhhheecCCCC
Q 043160          263 CTAYFIMGWLMKRKGPVFVSSFNPLSMVIIAILGSFFIAEELFLGRIVGAIVIVIGLYMVLWGRSKD  329 (333)
Q Consensus       263 ~~~~~~~~~a~~~~~~~~~~~~~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~~~~~~~~~~~  329 (333)
                      ..+.+.|..++++.+++.++.+...+-.+..+++++++|+++...+++..++.+.|++++.+...+.
T Consensus        64 t~aNY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~~~~~kIlaailAI~GiVmiay~DN~~  130 (290)
T KOG4314|consen   64 TGANYLYLLALKKISASDASAIFACNAAFVFILAIIVLGDRFMGFKILAAILAIGGIVMIAYADNEH  130 (290)
T ss_pred             ecCCcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHHhccchhhhhHHHHHHHhCcEEEEEeccchh
Confidence            4567889999999999999999999999999999999999999999999999999999988655443

>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]

Probab=94.19  E-value=0.4  Score=40.07  Aligned_cols=136  Identities=12%  Similarity=0.120  Sum_probs=99.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHH-hcCCCHHHHHHHHHHHHHHHHHHHHHHHhhcCCC----CCCHHHHHHHHHHHHHHH
Q 043160           10 PYLGVIFMQFCSSIMSIITKIAL-TQGMSQHVLVAYRMVVATSLIAPFAIVLERKTRP----KMTFRIFAKIALLGLFEP   84 (333)
Q Consensus        10 ~~l~~~~~~~~~~~~~~~~k~~l-~~~~~~~~~~~~r~~~~~~~l~~~~~~~~~~~~~----~~~~~~~~~~~~~g~~~~   84 (333)
                      |++++....+.-+..-...|.-. -.+..-++..++..+.+.++++.+....+.+...    ..+.....+.++.|++. 
T Consensus       156 GY~Wm~~NclssaafVL~mrkri~ltNf~d~dtmfYnNllslPiL~~~s~~~edws~~n~annl~~d~l~am~ISgl~s-  234 (309)
T COG5070         156 GYLWMFTNCLSSAAFVLIMRKRIKLTNFKDFDTMFYNNLLSLPILLSFSFLFEDWSPGNLANNLSVDSLMAMFISGLCS-  234 (309)
T ss_pred             ceEEEehhhHhHHHHHHHHHHhhcccccchhhHHHHhhhHHHHHHHHHHHHhccCCcchhhcCCChHHHHHHHHHHHHH-
Confidence            34444444444344344444331 1345677888999999999999888776654322    23444566778888887 


Q ss_pred             HHHHHHHHHHhcccchhhHHHhhchHHHHHHHHHHHHhccccceecccchhhHHHHHHHHHHHHHHHH
Q 043160           85 VIGQNLYFTGLKCSTATFTVAMCNILPALTFLMAWIFRLEKVKIKSMRSQAKILGTIVTAGGAMCMTL  152 (333)
Q Consensus        85 ~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~ll~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~  152 (333)
                      +.-.++--|.++-++.+..+....+.-.-.++.+.++++|+.|...      +.++.+.+....+-..
T Consensus       235 vgiSy~saWcvrVtSSTtySMvGALNKlp~alaGlvffdap~nf~s------i~sillGflsg~iYav  296 (309)
T COG5070         235 VGISYCSAWCVRVTSSTTYSMVGALNKLPIALAGLVFFDAPVNFLS------IFSILLGFLSGAIYAV  296 (309)
T ss_pred             hhhhhccceeEeehhhhHHHHHHHhhhChHHHhhhhhcCCchhHHH------HHHHHHHHHHHHHHHH
Confidence            7778888999999999999999999988999999999999999887      9999998776666543

>KOG1443 consensus Predicted integral membrane protein [Function unknown]

Probab=93.50  E-value=0.49  Score=41.55  Aligned_cols=126  Identities=13%  Similarity=0.172  Sum_probs=88.2

Q ss_pred             HHHHHhhhCCCchHHHHHHHHHHHHHHHHHHHhhccCCcc-ceeeccchhHHHHHHHHHHHHHHHHHHHHHHhhcCceee
Q 043160          203 LEAFLLKSYPAELSLTALMCFVSSVEGTILALAIERGNTG-IWLLHFDAKLLSVLYGGFVSCTAYFIMGWLMKRKGPVFV  281 (333)
Q Consensus       203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~~~~~~~~~~~~~a~~~~~~~~~  281 (333)
                      +.++..+..+=|+-.+.++..+-...........+...+. .-...+....-.++-.|+++..-..+-++++++.+.+..
T Consensus        34 ~~~~~~~~f~fPLf~ts~h~~v~flfa~~~~~l~~~~~~r~r~~~sw~~~Lr~~aPtalata~DIGLSN~sl~yVtlSlY  113 (349)
T KOG1443|consen   34 YFKWLTKNFHFPLFVTSLHLAVKFLFAALSRRLYQCSVPRARVVLSWRDYLRRLAPTALATALDIGLSNWSLEYVTLSLY  113 (349)
T ss_pred             HhhhhhcCcCCchHHHHHHHHHHHHHHHHHHHHHhccCCccccCCcHHHHHHHhhhhhhhhhcccccccceeeeeeeeee
Confidence            3444444455577677776666555444444443331111 111222223333445566688888889999999999999


Q ss_pred             eeccchhHHHHHHHHHHHhccccchhhhHHHHHHHhhhhhheecCCC
Q 043160          282 SSFNPLSMVIIAILGSFFIAEELFLGRIVGAIVIVIGLYMVLWGRSK  328 (333)
Q Consensus       282 ~~~~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~~~~~~~~~~  328 (333)
                      ++..+..+++..+++.++-=|++.|.-..=..+|-+|+++..+.+.+
T Consensus       114 TM~KSSsi~FIllFs~if~lEk~~w~L~l~v~lI~~Glflft~KsTq  160 (349)
T KOG1443|consen  114 TMTKSSSILFILLFSLIFKLEKFRWALVLIVLLIAVGLFLFTYKSTQ  160 (349)
T ss_pred             eeccccHHHHHHHHHHHHHhHHHHHHHHHHHHHHhhheeEEEecccc
Confidence            99999999999999999999999999988888899999988876643

>PF06379 RhaT: L-rhamnose-proton symport protein (RhaT); InterPro: IPR004673 These proteins are members of the L-Rhamnose Symporter (RhaT) family

Probab=90.70  E-value=1.2  Score=39.99  Aligned_cols=142  Identities=16%  Similarity=0.058  Sum_probs=84.7

Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCchHHHHHHHHHHHHHHHHHHHhhcc-CCccc-eeeccchhHHHHHHH
Q 043160          181 EHITKGALMIAAGCFSWSCFIILEAFLLKSYPAELSLTALMCFVSSVEGTILALAIER-GNTGI-WLLHFDAKLLSVLYG  258 (333)
Q Consensus       181 ~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~l~~~  258 (333)
                      .+...|.++..+++++.+.+.+=.|| .|+. + .+.......+-+-+..|.....-. ++..+ ....+...+......
T Consensus         3 ~~ii~Gii~h~iGg~~~~sfy~P~kk-vk~W-s-WEs~Wlv~gi~swli~P~~~a~l~ip~~~~i~~~~~~~~l~~~~l~   79 (344)
T PF06379_consen    3 SAIILGIIFHAIGGFASGSFYVPFKK-VKGW-S-WESYWLVQGIFSWLIVPWLWALLAIPDFFSIYSATPASTLFWTFLF   79 (344)
T ss_pred             chHHHHHHHHHHHHHHhhhhccchhh-cCCc-c-HHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHhCChhHHHHHHHH
Confidence            46679999999999999999888777 5555 2 333333222222333343322211 02111 112222445555566


Q ss_pred             HHHHHHHHHHHHHHHhhcCceee-eeccchhHHHHHHHHHHHhcc-------ccchhhhHHHHHHHhhhhhheec
Q 043160          259 GFVSCTAYFIMGWLMKRKGPVFV-SSFNPLSMVIIAILGSFFIAE-------ELFLGRIVGAIVIVIGLYMVLWG  325 (333)
Q Consensus       259 ~~~~~~~~~~~~~a~~~~~~~~~-~~~~~~~pv~~~~~~~~~~~e-------~~~~~~~~G~~li~~g~~~~~~~  325 (333)
                      |++-.++-..|..++++++.+.. ++..-+..+++.++--++.|+       +-....++|.++.++|+.+..+.
T Consensus        80 G~lWGIGgltfGl~mryLGvSLG~sI~lGl~~~~GTlippi~~g~~~~l~~~~~g~~vL~Gv~v~LiGIai~g~A  154 (344)
T PF06379_consen   80 GVLWGIGGLTFGLAMRYLGVSLGQSIALGLCAVFGTLIPPIFQGTFDELLATPSGQIVLLGVAVCLIGIAICGKA  154 (344)
T ss_pred             HHHHhcchhhHhHHHHHHhHHHHHHHHHHHHHHHhhchHHHHcCcccccccCCCchhhhhHHHHHHHHHHHHhHH
Confidence            88888888999999999887543 223333445555554444332       22346789999999999888753

This family includes two characterised members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.; GO: 0015153 rhamnose transmembrane transporter activity, 0008645 hexose transport, 0016021 integral to membrane

>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function

Probab=89.97  E-value=0.43  Score=41.27  Aligned_cols=130  Identities=11%  Similarity=0.108  Sum_probs=77.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhhCCCchHHHHHHHHHHHHHHHHHHHhhccCCccceeeccchhHHHHHHHHHHHHHH
Q 043160          186 GALMIAAGCFSWSCFIILEAFLLKSYPAELSLTALMCFVSSVEGTILALAIERGNTGIWLLHFDAKLLSVLYGGFVSCTA  265 (333)
Q Consensus       186 G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  265 (333)
                      |.+.+++|+++++-..+=.||.-.  .|++...++++....+.........+.   ..+       +..-...|.+-+.+
T Consensus         1 G~~a~~va~~~fGs~~vPvK~~~~--gDg~~fQw~~~~~i~~~g~~v~~~~~~---p~f-------~p~amlgG~lW~~g   68 (254)
T PF07857_consen    1 GYIACIVAVLFFGSNFVPVKKFDT--GDGFFFQWVMCSGIFLVGLVVNLILGF---PPF-------YPWAMLGGALWATG   68 (254)
T ss_pred             CchhHHHHHHHhcccceeeEeccC--CCcHHHHHHHHHHHHHHHHHHHHhcCC---Ccc-------eeHHHhhhhhhhcC
Confidence            456788889999888877665432  266777777666665555555543221   121       11122234445555


Q ss_pred             HHHHHHHHhhcCceeeee-ccchhHHHHHHHHHH-Hhccc-----cchhhhHHHHHHHhhhhhheecCC
Q 043160          266 YFIMGWLMKRKGPVFVSS-FNPLSMVIIAILGSF-FIAEE-----LFLGRIVGAIVIVIGLYMVLWGRS  327 (333)
Q Consensus       266 ~~~~~~a~~~~~~~~~~~-~~~~~pv~~~~~~~~-~~~e~-----~~~~~~~G~~li~~g~~~~~~~~~  327 (333)
                      ..+-.-.++..+-...-. -...+.+.+-..+.+ +||++     -.++.++|++++++|..+...-|.
T Consensus        69 N~~~vpii~~iGLglg~liW~s~n~l~Gw~~grfGlFg~~~~~~~~~~Ln~~G~~l~~~~~~~f~fik~  137 (254)
T PF07857_consen   69 NILVVPIIKTIGLGLGMLIWGSVNCLTGWASGRFGLFGLDPQVPSSPWLNYIGVALVLVSGIIFSFIKS  137 (254)
T ss_pred             ceeehhHhhhhhhHHHHHHHHHHHHHHHHHHhhceeccccccccchhHHHHHHHHHHHHHHHheeeecC
Confidence            666666666665543332 234466666666654 55553     345788999999999887765443

The region concerned is approximately 280 residues long.

>PRK02237 hypothetical protein; Provisional

Probab=87.08  E-value=3  Score=30.64  Aligned_cols=46  Identities=7%  Similarity=0.084  Sum_probs=39.2

Q ss_pred             eeccchhHHHHHHHHHHHhccccchhhhHHHHHHHhhhhhheecCC
Q 043160          282 SSFNPLSMVIIAILGSFFIAEELFLGRIVGAIVIVIGLYMVLWGRS  327 (333)
Q Consensus       282 ~~~~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~~~~~~~~~  327 (333)
                      +...-+-.+.+.++.+.+-|++|+...++|.++.++|+.++.+.+|
T Consensus        63 AAYGGvyI~~Sl~W~w~vdg~~Pd~~D~iGa~v~L~G~~iI~~~pR  108 (109)
T PRK02237         63 AAYGGVYVAGSLLWLWVVDGVRPDRWDWIGAAICLVGMAVIMYAPR  108 (109)
T ss_pred             HHhhhHHHHHHHHHHHHhcCcCCChhHHHhHHHHHHhHHHheecCC
Confidence            4455667788889999999999999999999999999988876654

>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]

Probab=86.95  E-value=1.1  Score=38.85  Aligned_cols=142  Identities=20%  Similarity=0.150  Sum_probs=96.7

Q ss_pred             ccHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCHHHHHHHHHHHHHHHHHHHHHHHhh----cCCCCC-CHHHHHHHHHHH
Q 043160            7 HAKPYLGVIFMQFCSSIMSIITKIALTQ-GMSQHVLVAYRMVVATSLIAPFAIVLER----KTRPKM-TFRIFAKIALLG   80 (333)
Q Consensus         7 ~~~~~l~~~~~~~~~~~~~~~~k~~l~~-~~~~~~~~~~r~~~~~~~l~~~~~~~~~----~~~~~~-~~~~~~~~~~~g   80 (333)
                      ...|.++...+.+.-+.+.+.+|..+.. +=.-..++++..+.+.++++|.....+.    ...+.. .++.|....+.|
T Consensus       183 s~~GvifGVlaSl~vAlnaiytkk~l~~v~~~iw~lt~ynnv~a~lLflpll~lnge~~~v~~~~~l~a~~Fw~~mtLsg  262 (347)
T KOG1442|consen  183 SWIGVIFGVLASLAVALNAIYTKKVLPPVGDCIWRLTAYNNVNALLLFLPLLILNGEFQAVVGFPHLPAIKFWILMTLSG  262 (347)
T ss_pred             chhhhHHHHHHHHHHHHHHHhhheecccccCeehhhHHHHHHHHHHHHHHHHHHcchHHHHcCcccchHHHHHHHHHHHH
Confidence            3578999999999999999999977532 2234667888999999999998775332    223343 345566666667


Q ss_pred             HHHHHHHHHHHHHHhcccchhhHHHhhchHHHHHHHHHHHHhccccceecccchhhHHHHHHHHHHHHHHHHhcC
Q 043160           81 LFEPVIGQNLYFTGLKCSTATFTVAMCNILPALTFLMAWIFRLEKVKIKSMRSQAKILGTIVTAGGAMCMTLLKG  155 (333)
Q Consensus        81 ~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~ll~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~~  155 (333)
                      +++ ..-++.-.+=++-++|-.--+=...-...=.+++..+++|..+...      |-+-++..+|...-+..++
T Consensus       263 lfg-F~mgyvTg~QIK~TSplThnISgTAka~aQTvlAv~~y~E~ks~lw------wtsn~~vLvgs~~YT~vk~  330 (347)
T KOG1442|consen  263 LFG-FAMGYVTGWQIKVTSPLTHNISGTAKAAAQTVLAVAYYSETKSGLW------WTSNIVVLVGSLAYTLVKE  330 (347)
T ss_pred             HHH-HHhhheeeEEEEecccceeeecHhHHHHHHHHHHHHHHHHHhhhhe------eeeeEEEEehhHHHHHHHH
Confidence            776 3333333444555555443333333445556788899999998886      8899999999988776543

>KOG2766 consensus Predicted membrane protein [Function unknown]

Probab=84.84  E-value=0.11  Score=44.21  Aligned_cols=136  Identities=15%  Similarity=0.138  Sum_probs=96.6

Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHHHHhhh-CCCchHHHHHHHHHHHHHHHHHHHhhccCCccceeeccchhHHHHHHHH
Q 043160          181 EHITKGALMIAAGCFSWSCFIILEAFLLKS-YPAELSLTALMCFVSSVEGTILALAIERGNTGIWLLHFDAKLLSVLYGG  259 (333)
Q Consensus       181 ~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  259 (333)
                      .+..+|..++-.-+.|-......+..+.++ .+.|...++.....-+++..++..+-.    ...    ...|..-+.++
T Consensus        14 kk~li~~~LGQiLSL~~t~~a~tss~la~k~iN~Pt~QtFl~Y~LLalVY~~~~~fR~----~~~----~~~~~hYilla   85 (336)
T KOG2766|consen   14 KKTLIGLGLGQILSLLITSTAFTSSELARKGINAPTSQTFLNYVLLALVYGPIMLFRR----KYI----KAKWRHYILLA   85 (336)
T ss_pred             hhhhheeeHHHHHHHHHHcchhhhHHHHhccCCCccHHHHHHHHHHHHHHhhHHHhhh----HHH----HHHHHHhhhee
Confidence            344444444433333333333344444444 445788888888777777777775421    111    12344455567


Q ss_pred             HHHHHHHHHHHHHHhhcCceeeeeccchhHHHHHHHHHHHhccccchhhhHHHHHHHhhhhhhee
Q 043160          260 FVSCTAYFIMGWLMKRKGPVFVSSFNPLSMVIIAILGSFFIAEELFLGRIVGAIVIVIGLYMVLW  324 (333)
Q Consensus       260 ~~~~~~~~~~~~a~~~~~~~~~~~~~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~~~~~~  324 (333)
                      ++..=+.++..+|.|+.+-+.++.+..-..+...+++|++++.+--+.++.|.++-+.|++++..
T Consensus        86 ~~DVEaNy~vV~AyQyTsmtSi~lLDcwaip~v~~lsw~fLktrYrlmki~gV~iCi~GvvmvV~  150 (336)
T KOG2766|consen   86 FVDVEANYFVVKAYQYTSMTSIMLLDCWAIPCVLVLSWFFLKTRYRLMKISGVVICIVGVVMVVF  150 (336)
T ss_pred             EEeecccEEEeeehhhcchHHHHHHHHhhhHHHHHHHHHHHHHHHhhheeeeEEeEecceEEEEE
Confidence            77778888889999999999999999999999999999999999999999999999999887764

>KOG3912 consensus Predicted integral membrane protein [General function prediction only]

Probab=84.07  E-value=1.3  Score=38.58  Aligned_cols=67  Identities=9%  Similarity=0.176  Sum_probs=59.9

Q ss_pred             HHHHHHHHHHHHHHHHhhcCceeeeeccchhHHHHHHHHHHHhccccchhhhHHHHHHHhhhhhhee
Q 043160          258 GGFVSCTAYFIMGWLMKRKGPVFVSSFNPLSMVIIAILGSFFIAEELFLGRIVGAIVIVIGLYMVLW  324 (333)
Q Consensus       258 ~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~~~~~~  324 (333)
                      -+++-..+..+.+.++...+++.-.++.-...++.-+++.-+++.+++..||.|+..+.+|++.+-.
T Consensus        92 Pal~Di~gsslm~vgL~lTsASsfQMlRGaviIFvglfst~~Ln~ti~~~qWl~i~fv~lGlviVg~  158 (372)
T KOG3912|consen   92 PALCDIAGSSLMYVGLNLTSASSFQMLRGAVIIFVGLFSTMFLNRTITGRQWLGILFVSLGLVIVGS  158 (372)
T ss_pred             hHHHHHhhhHHHHHHHHHhhHHHHHHhhcchhhhhHHHHHHHHhcccchhhHHHHHHHHhhhheeee
Confidence            4666677788888999999999999999999999999999999999999999999999999877654

>KOG1582 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=83.55  E-value=11  Score=32.92  Aligned_cols=139  Identities=11%  Similarity=0.105  Sum_probs=92.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHH-hcCCCHHHHHHHHHHHHHHHHHHHHHHHhhcC-----CCCCCHHHHHHHHHHHHH
Q 043160            9 KPYLGVIFMQFCSSIMSIITKIAL-TQGMSQHVLVAYRMVVATSLIAPFAIVLERKT-----RPKMTFRIFAKIALLGLF   82 (333)
Q Consensus         9 ~~~l~~~~~~~~~~~~~~~~k~~l-~~~~~~~~~~~~r~~~~~~~l~~~~~~~~~~~-----~~~~~~~~~~~~~~~g~~   82 (333)
                      .|...+-.+.++-+...-+-..++ ...-+..+++++...++.++++........-.     -.+.+++.....++.+..
T Consensus       190 ~Gv~mIsgALl~DA~iGNvQEk~m~~~~~ss~EmvfySy~iG~vflf~~mvlTge~f~a~~fcaehp~~tyGy~~~~s~~  269 (367)
T KOG1582|consen  190 IGVMMISGALLADAVIGNVQEKAMKMNPASSSEMVFYSYGIGFVFLFAPMVLTGELFSAWTFCAEHPVRTYGYAFLFSLA  269 (367)
T ss_pred             eeHHHHHHHHHHHHHhhHHHHHHHhhCCCCcceEEEeeecccHHHHHHHHHhcccchhhhHHHHhCcHhHHHHHHHHHHH
Confidence            344444444444443333332222 12345567777777777777665544322111     124567777888888887


Q ss_pred             HHHHHHHHHHHHhcccchhhHHHhhchHHHHHHHHHHHHhccccceecccchhhHHHHHHHHHHHHHHHHhc
Q 043160           83 EPVIGQNLYFTGLKCSTATFTVAMCNILPALTFLMAWIFRLEKVKIKSMRSQAKILGTIVTAGGAMCMTLLK  154 (333)
Q Consensus        83 ~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~ll~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~  154 (333)
                      + .++......-++.-++..++.+...--..|.+++++++..++|...      .-+..+.+.|+.+=.+.+
T Consensus       270 g-ylG~~~VLalI~~fGA~~aatvTTaRKavTi~lSfllFsKPfT~qy------~~~gllv~lgI~Ln~ysk  334 (367)
T KOG1582|consen  270 G-YLGIVFVLALIKLFGALIAATVTTARKAVTILLSFLLFSKPFTEQY------VWSGLLVVLGIYLNMYSK  334 (367)
T ss_pred             h-HhhHHHHHHHHHHhchhHHHHHHHhHhHHHHHHHHHHHcCchHHHH------hhhhHHHHHHHHhhcccC
Confidence            7 6676666666666788888888888889999999999999999887      788888889998866443

>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function

Probab=83.55  E-value=2  Score=31.47  Aligned_cols=43  Identities=14%  Similarity=0.192  Sum_probs=36.7

Q ss_pred             cchhHHHHHHHHHHHhccccchhhhHHHHHHHhhhhhheecCC
Q 043160          285 NPLSMVIIAILGSFFIAEELFLGRIVGAIVIVIGLYMVLWGRS  327 (333)
Q Consensus       285 ~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~~~~~~~~~  327 (333)
                      .-+-.+.+.+.++.+-|++|+...++|.++.++|+.++.+.+|
T Consensus        64 GGvfI~~Sl~W~w~vdg~~Pd~~D~iGa~i~L~G~~iI~~~PR  106 (107)
T PF02694_consen   64 GGVFIVASLLWGWLVDGVRPDRWDWIGAAICLVGVAIILFAPR  106 (107)
T ss_pred             hhhHHHHHHHHHhhhcCcCCChHHHHhHHHHHHhHHheEecCC
Confidence            3345567888999999999999999999999999998887765

; GO: 0016020 membrane

>PF04342 DUF486: Protein of unknown function, DUF486; InterPro: IPR007437 This family contains several proteins of uncharacterised function

Probab=82.90  E-value=1.4  Score=32.15  Aligned_cols=32  Identities=19%  Similarity=0.403  Sum_probs=27.4

Q ss_pred             HHHHHHHHhccccchhhhHHHHHHHhhhhhhe
Q 043160          292 IAILGSFFIAEELFLGRIVGAIVIVIGLYMVL  323 (333)
Q Consensus       292 ~~~~~~~~~~e~~~~~~~~G~~li~~g~~~~~  323 (333)
                      -..++.++++|++++..+.|.++++++++.+.
T Consensus        76 F~~Fsv~~l~E~l~~n~l~af~~i~~av~fiF  107 (108)
T PF04342_consen   76 FAPFSVFYLGEPLKWNYLWAFLCILGAVYFIF  107 (108)
T ss_pred             eHHHHHHHhCCCccHHHHHHHHHHHHhhheee
Confidence            34567889999999999999999999987654

>KOG4831 consensus Unnamed protein [Function unknown]

Probab=82.47  E-value=5.4  Score=29.17  Aligned_cols=62  Identities=15%  Similarity=0.187  Sum_probs=47.7

Q ss_pred             HHHHHHHHHHHHhhcCceeeeecc-chhHHHHHHHHHHHhccccchhhhHHHHHHHhhhhhhe
Q 043160          262 SCTAYFIMGWLMKRKGPVFVSSFN-PLSMVIIAILGSFFIAEELFLGRIVGAIVIVIGLYMVL  323 (333)
Q Consensus       262 ~~~~~~~~~~a~~~~~~~~~~~~~-~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~~~~~  323 (333)
                      ...+..+|+.-+++.+-+...++. ++.-.++.+.+...-.|......+.|..++++|+.+..
T Consensus        62 NqcgSaly~~tLa~a~islavpv~nsltfafta~~G~~LGE~~~g~~a~lGt~liv~Gi~Lci  124 (125)
T KOG4831|consen   62 NQCGSALYYLTLASAPISLAVPVTNSLTFAFTAIFGKALGEETQGGLALLGTSLIVFGIWLCI  124 (125)
T ss_pred             HHhhHHHHHHHHhcCCceeeeeecchhHHHHHHHHHHHhccccccceeehhhhHHhhhhhhee
Confidence            455566788888888888777665 45778888889865555577888999999999988753

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	333
2i68_A	137	Protein EMRE; transmembrane protein, small-multidr	98.89
3b5d_A	110	Multidrug transporter EMRE; helical membrane prote	98.84
2i68_A	137	Protein EMRE; transmembrane protein, small-multidr	98.83
3b5d_A	110	Multidrug transporter EMRE; helical membrane prote	98.71

>2i68_A Protein EMRE; transmembrane protein, small-multidrug resistance, transporter, homodimer, dual topology, transport protein; NMR {Escherichia coli}

Probab=98.89  E-value=1.1e-09  Score=84.18  Aligned_cols=69  Identities=17%  Similarity=0.382  Sum_probs=52.8

Q ss_pred             HHHH-HHHHHHHHHHHHhhcCceeeeec-cchhHHHHHHHHHHHhccccchhhhHHHHHHHhhhhhheecC
Q 043160          258 GGFV-SCTAYFIMGWLMKRKGPVFVSSF-NPLSMVIIAILGSFFIAEELFLGRIVGAIVIVIGLYMVLWGR  326 (333)
Q Consensus       258 ~~~~-~~~~~~~~~~a~~~~~~~~~~~~-~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~~~~~~~~  326 (333)
                      ++++ .+++++++.+++++.+++.+.++ ..+.|+++.+++++++||++++.+++|+++|++|+++....+
T Consensus        35 l~i~~~~ls~~l~~~alk~i~~s~ay~iw~~l~pv~~~l~g~l~lgE~ls~~~~~Gi~LIi~GV~ll~~~~  105 (137)
T 2i68_A           35 GTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLLS  105 (137)
T ss_dssp             HHHHHHHHHHHHHHHHHC-----CHHHHHHHHHHHHHHHHHHHHHC------CHHHHHHHHHHHHHHHHC-
T ss_pred             HHHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcCC
Confidence            4556 99999999999999999999998 899999999999999999999999999999999999987644

>3b5d_A Multidrug transporter EMRE; helical membrane protein, multidrug resistance transporter, SMR, antiport, inner membrane, transmembrane; HET: P4P; 3.80A {Escherichia coli K12} PDB: 3b61_A 3b62_A*

Probab=98.84  E-value=5.4e-08  Score=72.13  Aligned_cols=100  Identities=17%  Similarity=0.255  Sum_probs=81.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 043160           10 PYLGVIFMQFCSSIMSIITKIALTQGMSQHVLVAYRMVVATSLIAPFAIVLERKTRPKMTFRIFAKIALLGLFEPVIGQN   89 (333)
Q Consensus        10 ~~l~~~~~~~~~~~~~~~~k~~l~~~~~~~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~   89 (333)
                      .+++.+++.++-.......|.. + +..                                 + .++. +.+.+....++.
T Consensus         3 ~~l~l~~a~~~e~~~~~~lK~s-~-~~~---------------------------------~-~~~~-~~~~~~~~~~~~   45 (110)
T 3b5d_A            3 PYIYLGGAILAEVIGTTLMKFS-E-GFT---------------------------------R-LWPS-VGTIICYCASFW   45 (110)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhc-c-Ccc---------------------------------h-HHHH-HHHHHHHHHHHH
Confidence            4677777777777777777765 2 111                                 1 1222 455666688999


Q ss_pred             HHHHHhcccchhhHHHh-hchHHHHHHHHHHHHhccccceecccchhhHHHHHHHHHHHHHHHH
Q 043160           90 LYFTGLKCSTATFTVAM-CNILPALTFLMAWIFRLEKVKIKSMRSQAKILGTIVTAGGAMCMTL  152 (333)
Q Consensus        90 ~~~~al~~~~~~~~~~l-~~~~pi~~~ll~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~  152 (333)
                      ++.+++++.|.+.+.++ ..+.|+++.+++++++||++|..+      ++|+.+++.|++++..
T Consensus        46 ~~~~al~~~p~s~ay~i~~g~~~v~~~l~~~~~~~E~~s~~~------~~Gi~lIi~Gv~~l~~  103 (110)
T 3b5d_A           46 LLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPA------IIGMMLICAGVLIINL  103 (110)
T ss_pred             HHHHHHHhCChhhHHHHHhhHHHHHHHHHHHHHhCCCCCHHH------HHHHHHHHHHHHHHhc
Confidence            99999999999999998 799999999999999999999997      9999999999999863

>2i68_A Protein EMRE; transmembrane protein, small-multidrug resistance, transporter, homodimer, dual topology, transport protein; NMR {Escherichia coli}

Probab=98.83  E-value=1.3e-08  Score=78.20  Aligned_cols=70  Identities=17%  Similarity=0.266  Sum_probs=53.6

Q ss_pred             HHHHHHHHHHHHHHHHHhcccchhhHHHh-hchHHHHHHHHHHHHhccccceecccchhhHHHHHHHHHHHHHHHHh
Q 043160           78 LLGLFEPVIGQNLYFTGLKCSTATFTVAM-CNILPALTFLMAWIFRLEKVKIKSMRSQAKILGTIVTAGGAMCMTLL  153 (333)
Q Consensus        78 ~~g~~~~~~~~~~~~~al~~~~~~~~~~l-~~~~pi~~~ll~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~  153 (333)
                      +.+++..+++++++.+++++.|++.+..+ .++.|+++++++++++||+++..+      ++|++++++|++++...
T Consensus        34 ~l~i~~~~ls~~l~~~alk~i~~s~ay~iw~~l~pv~~~l~g~l~lgE~ls~~~------~~Gi~LIi~GV~ll~~~  104 (137)
T 2i68_A           34 VGTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPA------IIGMMLICAGVLIINLL  104 (137)
T ss_dssp             CHHHHHHHHHHHHHHHHHC-----CHHHHHHHHHHHHHHHHHHHHHC------C------HHHHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHhCCCCCHHH------HHHHHHHHHHHHHHhcC
Confidence            46666679999999999999999999998 899999999999999999999998      99999999999998753

>3b5d_A Multidrug transporter EMRE; helical membrane protein, multidrug resistance transporter, SMR, antiport, inner membrane, transmembrane; HET: P4P; 3.80A {Escherichia coli K12} PDB: 3b61_A 3b62_A*

Probab=98.71  E-value=2.4e-08  Score=74.11  Aligned_cols=70  Identities=17%  Similarity=0.375  Sum_probs=64.3

Q ss_pred             HHHH-HHHHHHHHHHHHhhcCceeeeec-cchhHHHHHHHHHHHhccccchhhhHHHHHHHhhhhhheecCC
Q 043160          258 GGFV-SCTAYFIMGWLMKRKGPVFVSSF-NPLSMVIIAILGSFFIAEELFLGRIVGAIVIVIGLYMVLWGRS  327 (333)
Q Consensus       258 ~~~~-~~~~~~~~~~a~~~~~~~~~~~~-~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~~~~~~~~~  327 (333)
                      .+++ ...++.++.+++|+.+.+.+.++ ..+.|+++.+.+++++||++++.+++|.++|++|++.....++
T Consensus        35 ~~~~~~~~~~~~~~~al~~~p~s~ay~i~~g~~~v~~~l~~~~~~~E~~s~~~~~Gi~lIi~Gv~~l~~~~~  106 (110)
T 3b5d_A           35 GTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLLSR  106 (110)
T ss_pred             HHHHHHHHHHHHHHHHHHhCChhhHHHHHhhHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcCCC
Confidence            4555 88999999999999999999888 8999999999999999999999999999999999999877653

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00