Citrus Sinensis ID: 043189

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180--
Protein Sequence
DKYRSILNEEAKSTQWRHGGPPIFDKVNKLFEEGRTKEWPKGSIEETVQNAVKSWEMELSHKTSLNDFKTINPEKFKLIVNGRKDLSGEETLQLGSYNALLKNSLPKEFQYYRADEETFKSSHDAFRSAFPRGFAWEVISVFSGPPVVAYKFRHWGYFEGPFQGHAPTGEMVEFYGIGIMKV
Secondary Structure (PSIPRED)
cccccccccccccccEEcccccccHHcHHHHHHccccccccccHHHHHHHHHHHHHHHHcccccccccEEEccccEEEEEcccccccHHHHHHHccHHHHHcccccccccccccccHHHHHHHHHHHHHcccccEEEEEEEEccccEEEEEEEcccccccccccccccccEEEEEEEEEEEc
Secondary Structure Prediction (SSPRO)
cccHHHHHcccccEEEEccccccHHHHHHHHHcccccccccccHHHHHHHHHHHHEEEEEccccHHHcEEEccccEEEEEcccccccHHHHHHccccHHEEccccccccccccccHccHHHHHHHHHHHccccccEEEEEEcccccEEEEEEEEccccccccccccccccEEEEEEEEEEEc
Coil and Loop (DISEMBL)
DKYRSILNEEakstqwrhggppifDKVNKLFeegrtkewpkgsiEETVQNAVKSWEMELShktslndfktinpekFKLIVNgrkdlsgeetlqLGSYNAllknslpkefqyyradeetfksshDAFRSAFPRGFAWEVISVfsgppvvaykfrhwgyfegpfqghaptgemvEFYGIGIMKV
Flexible Loop (DISEMBL)
dkyrsilneeakstqwrhggppiFDKVNKLFEEgrtkewpkgsieETVQNAVKSWEMELShktslndfktinpEKFKLIVNGRKDLSGEETLQLGSYNALLKNSLPKEFQYYRADEETFKSSHDAFRSAFPRGFAWEVISVFSGPPVVAYKFRHWGYFEGPFQGHAPTGEMVEFYGIGIMKV
Low Complexity Region (SEG)
DKYRSILNEEAKSTQWRHGGPPIFDKVNKLFEEGRTKEWPKGSIEETVQNAVKSWEMELSHKTSLNDFKTINPEKFKLIVNGRKDLSGEETLQLGSYNALLKNSLPKEFQYYRADEETFKSSHDAFRSAFPRGFAWEVISVFSGPPVVAYKFRHWGYFEGPFQGHAPTGEMVEFYGIGIMKV
Disordered region (IsUnstruct)
**********************IFDKVNKLF********************VKSWEMEL***TSLNDFKTINPEKFKLIVNGRKDLSGEETLQLGSYNALLKNSLPKEFQYYRADEETFKSSHDAFRSAFPRGFAWEVISVFSGPPVVAYKFRHWGYFEGPFQGHAPTGEMVEFYGIGI***
Disordered Region (DISOPRED)
*KYRSILNEEAKSTQWRHGGPPIFDKVNKLFE**********SIEETVQNAVKSWEMELSHKTSLNDFKTINPEKFKLIVNGRKDLSGEETLQLGSYNALLKNSLPKEF**************DAFRSAFPRGFAWEVISVFSGPPVVAYKFRHWGYFEGPFQGHAPTGEMVEFYGIGIMKV
Disordered Region (DISEMBL)
DKYRSILNEEAKSTQWRHGGPPIFDKVNKLFEEGRTKEWPKGSIEETVQNAVKSWEMELSHKTSLNDFKTINPEKFKLIVNGRKDLSGEETLQLGSYNALLKNSLPKEFQYYRADEETFKSSHDAFRSAFPRGFAWEVISVFSGPPVVAYKFRHWGYFEGPFQGHAPTGEMVEFYGIGIMKV
Disordered Region (DISPRO)
DKYRSILNEEAKSTQWRHGGPPIFDKVNKLFEEGRTKEWPKGSIEETVQNAVKSWEMELSHKTSLNDFKTINPEKFKLIVNGRKDLSGEETLQLGSYNALLKNSLPKEFQYYRADEETFKSSHDAFRSAFPRGFAWEVISVFSGPPVVAYKFRHWGYFEGPFQGHAPTGEMVEFYGIGIMKV
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
DKYRSILNEEAKSTQWRHGGPPIFDKVNKLFEEGRTKEWPKGSIEETVQNAVKSWEMELSHKTSLNDFKTINPEKFKLIVNGRKDLSGEETLQLGSYNALLKNSLPKEFQYYRADEETFKSSHDAFRSAFPRGFAWEVISVFSGPPVVAYKFRHWGYFEGPFQGHAPTGEMVEFYGIGIMKV
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	182	2.2.26 [Sep-21-2011]
P16273	235	Pathogen-related protein	N/A	no	1.0	0.774	0.513	6e-50

>sp|P16273|PRPX_HORVU Pathogen-related protein OS=Hordeum vulgare PE=2 SV=2

 Score =  196 bits (498), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 95/185 (51%), Positives = 125/185 (67%), Gaps = 3/185 (1%)

Query: 1   DKYRSILNEEA-KSTQWRHGGPPIFDKVNKLFEEGRTKEWPKGSIEETVQNAVKSWEMEL 59
           DKYRS L+ +  K T WRHG PP +D VNKLFEE RTKEW +GS+EE VQ  +K+WEME+
Sbjct: 9   DKYRSFLHGDGEKKTVWRHGAPPNYDLVNKLFEEERTKEWAEGSVEEKVQRLLKTWEMEM 68

Query: 60  SHKTSLNDFKTINPEKFKLIVNGRKDLSGEETLQLGSYNALLKNSLPKEFQYYRADEETF 119
            HK    D K++N + +    NG K L+ EE + +G YNA L  +LP E + Y  + E+ 
Sbjct: 69  VHKVRPEDQKSVNLKNYSASTNGLKPLTREEVMAMGGYNAFLATTLPPEHRIYDPEAESV 128

Query: 120 KSSHDAFRSAFPRGFAWEVISVFSGP--PVVAYKFRHWGYFEGPFQGHAPTGEMVEFYGI 177
           +S+   F +AFPRGFA EV+ V+S P  P +A+KFRHWGY EGPF+GH P G  VEF+G+
Sbjct: 129 ESATSTFLTAFPRGFAIEVLDVYSSPSAPRIAFKFRHWGYMEGPFKGHPPHGGRVEFFGV 188

Query: 178 GIMKV 182
            +  V
Sbjct: 189 CVFHV 193

Hordeum vulgare (taxid: 4513)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	182
225461699	236	PREDICTED: pathogen-related protein [Vit	1.0	0.771	0.808	3e-85
224117016	267	predicted protein [Populus trichocarpa]	1.0	0.681	0.736	5e-84
388491968	242	unknown [Lotus japonicus]	1.0	0.752	0.763	7e-83
357516319	237	Pathogen-related protein [Medicago trunc	1.0	0.767	0.769	1e-82
224117018	196	predicted protein [Populus trichocarpa]	0.989	0.918	0.802	2e-82
255575139	195	conserved hypothetical protein [Ricinus	1.0	0.933	0.769	2e-82
224117014	247	predicted protein [Populus trichocarpa]	1.0	0.736	0.759	2e-81
356549649	235	PREDICTED: pathogen-related protein-like	1.0	0.774	0.747	3e-79
18412106	238	pathogenesis-related protein [Arabidopsi	0.994	0.760	0.747	4e-78
297842653	276	predicted protein [Arabidopsis lyrata su	1.0	0.659	0.681	1e-77

>gi|225461699|ref|XP_002285489.1| PREDICTED: pathogen-related protein [Vitis vinifera] gi|147782706|emb|CAN63863.1| hypothetical protein VITISV_026996 [Vitis vinifera]

 Score =  319 bits (817), Expect = 3e-85,   Method: Compositional matrix adjust.
 Identities = 148/183 (80%), Positives = 171/183 (93%), Gaps = 1/183 (0%)

Query: 1   DKYRSILNEEA-KSTQWRHGGPPIFDKVNKLFEEGRTKEWPKGSIEETVQNAVKSWEMEL 59
           DKYRS+L +E  K+T WRHGGPP +D VN+LFEEGRTKEWPKGS+EETVQNAVKSWEMEL
Sbjct: 14  DKYRSLLQDEVEKNTHWRHGGPPTYDSVNQLFEEGRTKEWPKGSLEETVQNAVKSWEMEL 73

Query: 60  SHKTSLNDFKTINPEKFKLIVNGRKDLSGEETLQLGSYNALLKNSLPKEFQYYRADEETF 119
           SHKT L DF+TINPEKFKLIVNGR+ LSGEETL+LGSYNALLK+SLP+E +YY+A+EE+F
Sbjct: 74  SHKTRLRDFRTINPEKFKLIVNGREGLSGEETLKLGSYNALLKSSLPEELKYYKAEEESF 133

Query: 120 KSSHDAFRSAFPRGFAWEVISVFSGPPVVAYKFRHWGYFEGPFQGHAPTGEMVEFYGIGI 179
           +SSHDAFRSAFPRGFAWEVISV+SGPP +AYKFRHWG+FEGPF+GHAPTGEM +FYG+GI
Sbjct: 134 ESSHDAFRSAFPRGFAWEVISVYSGPPEIAYKFRHWGFFEGPFKGHAPTGEMAQFYGLGI 193

Query: 180 MKV 182
           +KV
Sbjct: 194 LKV 196

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224117016|ref|XP_002317453.1| predicted protein [Populus trichocarpa] gi|222860518|gb|EEE98065.1| predicted protein [Populus trichocarpa]

 Score =  315 bits (807), Expect = 5e-84,   Method: Compositional matrix adjust.
 Identities = 148/201 (73%), Positives = 175/201 (87%), Gaps = 19/201 (9%)

Query: 1   DKYRSILNEEAK-STQWRHGGPPIFDKVNKLFEEGRTK------------------EWPK 41
           D YRSIL++EA+ +TQWRHGGPP++D VN+LFEEGRTK                  EWPK
Sbjct: 14  DIYRSILHDEAENTTQWRHGGPPVYDSVNQLFEEGRTKVLDPFSSSPLCLYMSKLCEWPK 73

Query: 42  GSIEETVQNAVKSWEMELSHKTSLNDFKTINPEKFKLIVNGRKDLSGEETLQLGSYNALL 101
           GS+EE VQNA+KSWEMELSHKT L DFKTINP+KFKLIVNGR+ LSGEETL+LGSYNALL
Sbjct: 74  GSLEEVVQNAIKSWEMELSHKTRLQDFKTINPDKFKLIVNGREGLSGEETLRLGSYNALL 133

Query: 102 KNSLPKEFQYYRADEETFKSSHDAFRSAFPRGFAWEVISVFSGPPVVAYKFRHWGYFEGP 161
           KNSLPKEFQYY+ADEETF+SSHDAFRSAFPRGFAWEV++V+SGPPV+++KFRHWG+FEGP
Sbjct: 134 KNSLPKEFQYYKADEETFESSHDAFRSAFPRGFAWEVLNVYSGPPVISFKFRHWGFFEGP 193

Query: 162 FQGHAPTGEMVEFYGIGIMKV 182
           F+GHAPTGE VEF+G+G++K+
Sbjct: 194 FKGHAPTGEKVEFHGLGVLKI 214

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388491968|gb|AFK34050.1| unknown [Lotus japonicus]

 Score =  311 bits (797), Expect = 7e-83,   Method: Compositional matrix adjust.
 Identities = 139/182 (76%), Positives = 167/182 (91%)

Query: 1   DKYRSILNEEAKSTQWRHGGPPIFDKVNKLFEEGRTKEWPKGSIEETVQNAVKSWEMELS 60
           DKYRS ++EE+ +T WRHGGPP +D VN LFE+GRTKEWPKGS+EETVQNA+KSWEME+S
Sbjct: 14  DKYRSFIHEESDTTHWRHGGPPTYDVVNHLFEQGRTKEWPKGSLEETVQNAIKSWEMEVS 73

Query: 61  HKTSLNDFKTINPEKFKLIVNGRKDLSGEETLQLGSYNALLKNSLPKEFQYYRADEETFK 120
           HKT L DF+TINPEKFKL VNGR+ LS EETL +GSYNALLK+SLP+EF+YY+++EETF+
Sbjct: 74  HKTRLQDFRTINPEKFKLFVNGREGLSAEETLSIGSYNALLKSSLPEEFKYYKSEEETFE 133

Query: 121 SSHDAFRSAFPRGFAWEVISVFSGPPVVAYKFRHWGYFEGPFQGHAPTGEMVEFYGIGIM 180
           SSH+AFRSAFPRGFAWEVI V++GPP +AYKFRHWG+FEGPF+GHAPTG+MVEFYG+G +
Sbjct: 134 SSHEAFRSAFPRGFAWEVIKVYTGPPEIAYKFRHWGFFEGPFKGHAPTGKMVEFYGLGTL 193

Query: 181 KV 182
           KV
Sbjct: 194 KV 195

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357516319|ref|XP_003628448.1| Pathogen-related protein [Medicago truncatula] gi|355522470|gb|AET02924.1| Pathogen-related protein [Medicago truncatula]

 Score =  310 bits (794), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 140/182 (76%), Positives = 166/182 (91%)

Query: 1   DKYRSILNEEAKSTQWRHGGPPIFDKVNKLFEEGRTKEWPKGSIEETVQNAVKSWEMELS 60
           DKYRS L++EA +TQWRHGGPPI+D VNKLFE+GRTK WP+GS+EETVQNA+KSWEMELS
Sbjct: 13  DKYRSFLDDEAHTTQWRHGGPPIYDVVNKLFEQGRTKVWPEGSLEETVQNAIKSWEMELS 72

Query: 61  HKTSLNDFKTINPEKFKLIVNGRKDLSGEETLQLGSYNALLKNSLPKEFQYYRADEETFK 120
           HKT + DFKTINPEKFKL VNG + L+ EETL+LGSYNAL+KNSLP+E++YY+A+EETF+
Sbjct: 73  HKTRVQDFKTINPEKFKLFVNGTEGLTAEETLRLGSYNALMKNSLPEEYKYYKAEEETFE 132

Query: 121 SSHDAFRSAFPRGFAWEVISVFSGPPVVAYKFRHWGYFEGPFQGHAPTGEMVEFYGIGIM 180
           SSH+AFRSAFPRGFAWEVI V+ GPP +AYKFRHWG+FEGP++GHAPTG MVEFYG G +
Sbjct: 133 SSHEAFRSAFPRGFAWEVIKVYGGPPEIAYKFRHWGFFEGPYKGHAPTGNMVEFYGFGTL 192

Query: 181 KV 182
           KV
Sbjct: 193 KV 194

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224117018|ref|XP_002331809.1| predicted protein [Populus trichocarpa] gi|222874505|gb|EEF11636.1| predicted protein [Populus trichocarpa]

 Score =  310 bits (794), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 146/182 (80%), Positives = 170/182 (93%), Gaps = 2/182 (1%)

Query: 1   DKYRSILNEEAK-STQWRHGGPPIFDKVNKLFEEGRTKEWPKGSIEETVQNAVKSWEMEL 59
           DKYRS L++EA+ +TQWRHGGPPI+D VN+LFEEGRTKEWPKGS+EE VQNAVKSWEMEL
Sbjct: 12  DKYRSFLHDEAENTTQWRHGGPPIYDSVNQLFEEGRTKEWPKGSLEEVVQNAVKSWEMEL 71

Query: 60  SHKTSLNDFKTINPEKFKLIVNGRKDLSGEETLQLGSYNALLKNSLPKEFQYYRADEETF 119
           SHKT L DFKTINP+KFKLIVNG + LSGEETL++GSYNALLK+SLPKEFQYY+ADEETF
Sbjct: 72  SHKTRLQDFKTINPDKFKLIVNG-EGLSGEETLRIGSYNALLKSSLPKEFQYYKADEETF 130

Query: 120 KSSHDAFRSAFPRGFAWEVISVFSGPPVVAYKFRHWGYFEGPFQGHAPTGEMVEFYGIGI 179
           +SSHDAFRSA PRGFAWEV+SV+SGPPV+++KFRHWG+FEGPF+GHAPT E VEFYG G+
Sbjct: 131 ESSHDAFRSALPRGFAWEVLSVYSGPPVISFKFRHWGFFEGPFKGHAPTEEKVEFYGFGV 190

Query: 180 MK 181
           ++
Sbjct: 191 LR 192

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255575139|ref|XP_002528474.1| conserved hypothetical protein [Ricinus communis] gi|223532083|gb|EEF33891.1| conserved hypothetical protein [Ricinus communis]

 Score =  310 bits (793), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 140/182 (76%), Positives = 167/182 (91%)

Query: 1   DKYRSILNEEAKSTQWRHGGPPIFDKVNKLFEEGRTKEWPKGSIEETVQNAVKSWEMELS 60
           DKYRS L +EA++TQWR GGPP +D VN+LFEEGR++EWPKGS+EE VQNA+KSWEMELS
Sbjct: 14  DKYRSFLYDEAETTQWRDGGPPNYDSVNQLFEEGRSEEWPKGSLEEIVQNAIKSWEMELS 73

Query: 61  HKTSLNDFKTINPEKFKLIVNGRKDLSGEETLQLGSYNALLKNSLPKEFQYYRADEETFK 120
           HKT L DFKTINP+KFKLIVNGRK LS EETL++GSYNALLK+S+PKE QYY+ADEE+F+
Sbjct: 74  HKTCLQDFKTINPDKFKLIVNGRKGLSAEETLRIGSYNALLKSSMPKELQYYKADEESFE 133

Query: 121 SSHDAFRSAFPRGFAWEVISVFSGPPVVAYKFRHWGYFEGPFQGHAPTGEMVEFYGIGIM 180
           SSH+AFR A PRGFAWEVISV+SGPPV+ +KFRHWG+FEGPF+GHAPTGE V+FYG+G++
Sbjct: 134 SSHEAFRLALPRGFAWEVISVYSGPPVITFKFRHWGFFEGPFKGHAPTGEKVQFYGLGVL 193

Query: 181 KV 182
           KV
Sbjct: 194 KV 195

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224117014|ref|XP_002331808.1| predicted protein [Populus trichocarpa] gi|222874504|gb|EEF11635.1| predicted protein [Populus trichocarpa]

 Score =  306 bits (784), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 139/183 (75%), Positives = 166/183 (90%), Gaps = 1/183 (0%)

Query: 1   DKYRSILNEEAK-STQWRHGGPPIFDKVNKLFEEGRTKEWPKGSIEETVQNAVKSWEMEL 59
           DKYRS L+E+ + +TQWRHGGPP FD VN+LFEEGRTKEWPKGS+EE VQNA+K+W+ME+
Sbjct: 14  DKYRSFLHEDTENTTQWRHGGPPNFDTVNQLFEEGRTKEWPKGSLEEVVQNAIKTWDMEI 73

Query: 60  SHKTSLNDFKTINPEKFKLIVNGRKDLSGEETLQLGSYNALLKNSLPKEFQYYRADEETF 119
            HKT + D KTINP+ FKLIVNGR+ L+ EETL++GSYNALLK+SLPKEFQYY+ADEETF
Sbjct: 74  EHKTRVQDIKTINPDTFKLIVNGREGLAAEETLRIGSYNALLKSSLPKEFQYYKADEETF 133

Query: 120 KSSHDAFRSAFPRGFAWEVISVFSGPPVVAYKFRHWGYFEGPFQGHAPTGEMVEFYGIGI 179
           +SSHDAFRSA PRGFAWEV+SV+SGPPV+++KFRHWG+FEGPF+GHAPT E VEFYG GI
Sbjct: 134 ESSHDAFRSALPRGFAWEVLSVYSGPPVISFKFRHWGFFEGPFKGHAPTEEKVEFYGFGI 193

Query: 180 MKV 182
           +KV
Sbjct: 194 LKV 196

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356549649|ref|XP_003543204.1| PREDICTED: pathogen-related protein-like [Glycine max]

 Score =  299 bits (765), Expect = 3e-79,   Method: Compositional matrix adjust.
 Identities = 136/182 (74%), Positives = 163/182 (89%)

Query: 1   DKYRSILNEEAKSTQWRHGGPPIFDKVNKLFEEGRTKEWPKGSIEETVQNAVKSWEMELS 60
           DKYRS L++E  + QWRHGGPP +D VNKLFEEGRTKEW +GS+EE VQNA+KSWEMELS
Sbjct: 4   DKYRSFLHDEPDNVQWRHGGPPTYDAVNKLFEEGRTKEWTEGSLEEIVQNAIKSWEMELS 63

Query: 61  HKTSLNDFKTINPEKFKLIVNGRKDLSGEETLQLGSYNALLKNSLPKEFQYYRADEETFK 120
           HKT L DFKTINPEKFKL VNGR+ LSGE+TL LGSYNALL++SLP++ + Y+ADEETF+
Sbjct: 64  HKTRLQDFKTINPEKFKLFVNGREGLSGEDTLSLGSYNALLQSSLPEDLKPYKADEETFE 123

Query: 121 SSHDAFRSAFPRGFAWEVISVFSGPPVVAYKFRHWGYFEGPFQGHAPTGEMVEFYGIGIM 180
           SSH+AF+SAFPRGFAWEVI V+SGPP +A+KFRHWG+FEGPF+GHAPTG+M +FYG+G +
Sbjct: 124 SSHEAFKSAFPRGFAWEVIKVYSGPPEIAFKFRHWGFFEGPFKGHAPTGKMAQFYGLGTV 183

Query: 181 KV 182
           KV
Sbjct: 184 KV 185

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|18412106|ref|NP_565189.1| pathogenesis-related protein [Arabidopsis thaliana] gi|21595167|gb|AAM66077.1| pathogenesis-related protein-like protein [Arabidopsis thaliana] gi|332198029|gb|AEE36150.1| pathogenesis-related protein [Arabidopsis thaliana]

 Score =  295 bits (756), Expect = 4e-78,   Method: Compositional matrix adjust.
 Identities = 136/182 (74%), Positives = 162/182 (89%), Gaps = 1/182 (0%)

Query: 1   DKYRSILNEEAKSTQWRHGGPPIFDKVNKLFEEGRTKEWPKGSIEETVQNAVKSWEMELS 60
           DKYRS+L E+A   QWR+  PP F+ VN+LFEEG+TK WP+GS+EETVQNA+KSWEME S
Sbjct: 8   DKYRSVL-EDAGQVQWRYDNPPDFNSVNQLFEEGQTKVWPEGSLEETVQNAIKSWEMEFS 66

Query: 61  HKTSLNDFKTINPEKFKLIVNGRKDLSGEETLQLGSYNALLKNSLPKEFQYYRADEETFK 120
           HK  L DFKTINPEKFKL VNGR+ LS EETL+LGSYNALLKNSLP+EFQYY+ +EE+F+
Sbjct: 67  HKIRLQDFKTINPEKFKLFVNGREGLSAEETLRLGSYNALLKNSLPEEFQYYKPEEESFE 126

Query: 121 SSHDAFRSAFPRGFAWEVISVFSGPPVVAYKFRHWGYFEGPFQGHAPTGEMVEFYGIGIM 180
           SSHDAFRSA PRGFAWE++SV+SGPPV+A+KFRHWGYFEG F+GHAPTGEMV+F G+G++
Sbjct: 127 SSHDAFRSALPRGFAWEILSVYSGPPVIAFKFRHWGYFEGTFKGHAPTGEMVQFLGLGVL 186

Query: 181 KV 182
           KV
Sbjct: 187 KV 188

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297842653|ref|XP_002889208.1| predicted protein [Arabidopsis lyrata subsp. lyrata] gi|297335049|gb|EFH65467.1| predicted protein [Arabidopsis lyrata subsp. lyrata]

 Score =  293 bits (751), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 141/207 (68%), Positives = 167/207 (80%), Gaps = 25/207 (12%)

Query: 1   DKYRSILNEEAK-STQWRHGGPPIFDKVNKLFEE------------------------GR 35
           DKYRSILN+E + + +WR+GGPPIFD VNKLFEE                        G+
Sbjct: 20  DKYRSILNDEKRGNIRWRYGGPPIFDTVNKLFEEERTQVQWRYGLPPDFNSVNQLFEEGQ 79

Query: 36  TKEWPKGSIEETVQNAVKSWEMELSHKTSLNDFKTINPEKFKLIVNGRKDLSGEETLQLG 95
           TK WP+GS+EETVQNA+KSWEME SHK  L DFKTINPEKFKL VNGR+ LS EETL+LG
Sbjct: 80  TKVWPQGSLEETVQNAIKSWEMEFSHKIRLQDFKTINPEKFKLFVNGREGLSAEETLRLG 139

Query: 96  SYNALLKNSLPKEFQYYRADEETFKSSHDAFRSAFPRGFAWEVISVFSGPPVVAYKFRHW 155
           SYNALLKNSLP+EFQYY+ +EE+F+SSHDAFRSA PRGFAWE++SV+SGPPV+A+KFRHW
Sbjct: 140 SYNALLKNSLPEEFQYYKPEEESFESSHDAFRSALPRGFAWEILSVYSGPPVIAFKFRHW 199

Query: 156 GYFEGPFQGHAPTGEMVEFYGIGIMKV 182
           GYFEG F+GHAPTGEMV+F G+G++KV
Sbjct: 200 GYFEGTFKGHAPTGEMVQFMGLGVLKV 226

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	182
TAIR|locus:2037503	238	AT1G78780 "AT1G78780" [Arabido	0.994	0.760	0.747	1.5e-76
ASPGD|ASPL0000016045	249	AN3877 [Emericella nidulans (t	0.879	0.642	0.410	9.8e-32

TAIR|locus:2037503 AT1G78780 "AT1G78780" [Arabidopsis thaliana (taxid:3702)]

 Score = 771 (276.5 bits), Expect = 1.5e-76, P = 1.5e-76
 Identities = 136/182 (74%), Positives = 162/182 (89%)

Query:     1 DKYRSILNEEAKSTQWRHGGPPIFDKVNKLFEEGRTKEWPKGSIEETVQNAVKSWEMELS 60
             DKYRS+L E+A   QWR+  PP F+ VN+LFEEG+TK WP+GS+EETVQNA+KSWEME S
Sbjct:     8 DKYRSVL-EDAGQVQWRYDNPPDFNSVNQLFEEGQTKVWPEGSLEETVQNAIKSWEMEFS 66

Query:    61 HKTSLNDFKTINPEKFKLIVNGRKDLSGEETLQLGSYNALLKNSLPKEFQYYRADEETFK 120
             HK  L DFKTINPEKFKL VNGR+ LS EETL+LGSYNALLKNSLP+EFQYY+ +EE+F+
Sbjct:    67 HKIRLQDFKTINPEKFKLFVNGREGLSAEETLRLGSYNALLKNSLPEEFQYYKPEEESFE 126

Query:   121 SSHDAFRSAFPRGFAWEVISVFSGPPVVAYKFRHWGYFEGPFQGHAPTGEMVEFYGIGIM 180
             SSHDAFRSA PRGFAWE++SV+SGPPV+A+KFRHWGYFEG F+GHAPTGEMV+F G+G++
Sbjct:   127 SSHDAFRSALPRGFAWEILSVYSGPPVIAFKFRHWGYFEGTFKGHAPTGEMVQFLGLGVL 186

Query:   181 KV 182
             KV
Sbjct:   187 KV 188

GO:0003674 "molecular_function" evidence=ND

GO:0005737 "cytoplasm" evidence=ISM

GO:0008150 "biological_process" evidence=ND

ASPGD|ASPL0000016045 AN3877 [Emericella nidulans (taxid:162425)]

 Score = 348 (127.6 bits), Expect = 9.8e-32, P = 9.8e-32
 Identities = 69/168 (41%), Positives = 103/168 (61%)

Query:     5 SILNEEAKSTQWRHGGPPIFDKVNKLFEEGRTKEWPKGSIEETVQNAVKSWEMELSHKTS 64
             ++LN+ A S  WR+G  P + K  + +E+ +T   P  S+   VQN VK+WE+E S KTS
Sbjct:    15 AVLNDTAAS--WRYGRIPDYTKTREFYEKTKTTSHPATSLASLVQNLVKNWEIEASFKTS 72

Query:    65 LNDFKTINPEKFKLIVNGRKDLSGEETLQLGSYNALLKNSLPKEFQYYRADEETFKSSHD 124
             L+D++TINPE +   +NG     GE  L++G+YNAL+  +     +YY  ++  F+ SH 
Sbjct:    73 LDDWRTINPETYTFSLNGGPAQPGEHMLRVGTYNALINAN-----EYYDPEQNDFEGSHK 127

Query:   125 AFRSAFPRGFAWEVISVFSGPPVVAYKFRHWGYFEGPFQGHAPTGEMV 172
             +F+   P  FAWEV  V+ GPPVV  ++RHWG  +G + G    GE+V
Sbjct:   128 SFKRMMPT-FAWEVKEVYCGPPVVVARWRHWGLMKGDYVGKNGRGEVV 174


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.316   0.135   0.415    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      182       182   0.00098  109 3  11 22  0.47    32
                                                     31  0.40    35


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  2
  No. of states in DFA:  588 (63 KB)
  Total size of DFA:  175 KB (2101 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  19.48u 0.20s 19.68t   Elapsed:  00:00:01
  Total cpu time:  19.48u 0.20s 19.68t   Elapsed:  00:00:01
  Start:  Mon May 20 19:06:54 2013   End:  Mon May 20 19:06:55 2013

GO:0008150 "biological_process" evidence=ND

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	182
PF07366	126	SnoaL: SnoaL-like polyketide cyclase; InterPro: IP	99.72
TIGR02096	129	conserved hypothetical protein, steroid delta-isom	99.11
COG5485	131	Predicted ester cyclase [General function predicti	99.09
PF12680	102	SnoaL_2: SnoaL-like domain; PDB: 3F40_A 3RGA_A 3G8	98.35
cd00781	122	ketosteroid_isomerase ketosteroid isomerase: Many	96.54
PF10184	113	DUF2358: Uncharacterized conserved protein (DUF235	93.71

>PF07366 SnoaL: SnoaL-like polyketide cyclase; InterPro: IPR009959 This domain is found in SnoaL [] a polyketide cyclase involved in nogalamycin biosynthesis

Probab=99.72  E-value=1.5e-17  Score=124.48  Aligned_cols=95  Identities=27%  Similarity=0.413  Sum_probs=76.8

Q ss_pred             EECCCccCchhhhhhcCccccccc-cCCCCccccCCCChHHHHHHHHHHHHhCCCCceeEEEEeeeCCCEEEEEEEEEee
Q 043189           79 IVNGRKDLSGEETLQLGSYNALLK-NSLPKEFQYYRADEETFKSSHDAFRSAFPRGFAWEVISVFSGPPVVAYKFRHWGY  157 (182)
Q Consensus        79 s~Ngg~~~~~~~~~~~G~Yn~~l~-~~lp~~~~~Y~~~~e~f~~s~~~f~~AFPdGf~wEVleV~s~pp~VafrwrhwGt  157 (182)
                      .+|.+..-.+++++.    ..+.. ++.++.    ..+.+++++..+.+++|||| +.++|.++++++++|+.+|+..||
T Consensus        10 ~~n~~d~~~~~~~~~----~d~~~~~~~~~~----~~G~~~~~~~~~~~~~afPD-~~~~i~~~~~~gd~v~~~~~~~Gt   80 (126)
T PF07366_consen   10 VWNRGDLDALDELVA----PDVVFHDPGPGP----PVGREGFKEFLKELRAAFPD-LRFEIEDVVAEGDRVAVRWTFTGT   80 (126)
T ss_dssp             HHHTT-GCHHHGTEE----EEEEEEGCTTTE----EEHHHHHHHHHHHHHHHSTT-TEEEEEEEEEETTEEEEEEEEEEE
T ss_pred             HHhCCCHHHHHHhcC----CCEEEEecCCCC----CCCHHHHHHHHHHHHHHCCC-CEEEEEEEEEECCEEEEEEEEEEe
Confidence            346666666666666    33332 221111    34678999999999999999 999999999999999999999999


Q ss_pred             eeccccccCCCCCEEEEEeEEEEEC
Q 043189          158 FEGPFQGHAPTGEMVEFYGIGIMKV  182 (182)
Q Consensus       158 ~~G~F~G~~pTGk~Vei~Gi~i~rV  182 (182)
                      |+|+|+|+|||||+|++.|++++||
T Consensus        81 h~g~~~g~~ptgk~v~~~~~~~~~~  105 (126)
T PF07366_consen   81 HTGEFMGIPPTGKPVEFRGMSIFRF  105 (126)
T ss_dssp             ESSEBTTBE-TTEEEEEEEEEEEEE
T ss_pred             ecCCcCCcCCCCCEEEEEEEEEEEE
Confidence            9999999999999999999999985

This domain was formerly known as DUF1486. It adopts a distorted alpha-beta barrel fold []. Structural data together with site-directed mutagenesis experiments have shown that SnoaL has a different mechanism to that of the classical aldolase for catalysing intramolecular aldol condensation [].; PDB: 2GEY_C 3F9S_A 2GEX_A 3EHC_B 2F99_D 2F98_D 1SJW_A 3K0Z_B.

>TIGR02096 conserved hypothetical protein, steroid delta-isomerase-related

Probab=99.11  E-value=6.2e-10  Score=82.56  Aligned_cols=67  Identities=18%  Similarity=0.341  Sum_probs=63.4

Q ss_pred             ChHHHHHHHHHHHHhCCCCceeEEEEeeeCCC-EEEEEEEEEeeeeccccccCCCCCEEEEEeEEEEEC
Q 043189          115 DEETFKSSHDAFRSAFPRGFAWEVISVFSGPP-VVAYKFRHWGYFEGPFQGHAPTGEMVEFYGIGIMKV  182 (182)
Q Consensus       115 ~~e~f~~s~~~f~~AFPdGf~wEVleV~s~pp-~VafrwrhwGt~~G~F~G~~pTGk~Vei~Gi~i~rV  182 (182)
                      +.++++..+..|.+++|+ +.+++.+++.+++ .|+..|+..|++.|+|.|+||||+++++.|+++++|
T Consensus        40 G~~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~~v~~~~~~~g~~~g~~~g~~~~g~~~~~~~~~~~~~  107 (129)
T TIGR02096        40 GKAQLARFLAPYRTAFPD-LLVDVVVCRNDEGVRVAAEWTVHGTYRTAFLGLPASGKTYSIRGVTFFVF  107 (129)
T ss_pred             cHHHHHHHHHHHHHhCch-hhceeEEEEecCCcEEEEEEEEeeeeccccCCCCCCCCEEEeeeeEEEEE
Confidence            588999999999999999 9999999998777 999999999999999999999999999999999885

This family of proteins about 135 amino acids in length largely restricted to the Proteobacteria. This family and a delta5-3-ketosteroid isomerase from Pseudomonas testosteroni appear homologous, especially toward their respective N-termini. Members, therefore, probably are enzymes.

>COG5485 Predicted ester cyclase [General function prediction only]

Probab=99.09  E-value=1.9e-10  Score=91.32  Aligned_cols=66  Identities=18%  Similarity=0.181  Sum_probs=58.5

Q ss_pred             ChHHHHHHHHHHHHhCCCCceeEEEEeeeCCCEEEEEEEEEeeeeccccccCCCCCEEEEEeEEEEE
Q 043189          115 DEETFKSSHDAFRSAFPRGFAWEVISVFSGPPVVAYKFRHWGYFEGPFQGHAPTGEMVEFYGIGIMK  181 (182)
Q Consensus       115 ~~e~f~~s~~~f~~AFPdGf~wEVleV~s~pp~VafrwrhwGt~~G~F~G~~pTGk~Vei~Gi~i~r  181 (182)
                      +-.+|......-..|||| +.++++.++|+||+||.|...-+|++|.|+|+||+||+|.+.=..+..
T Consensus        43 glsgyr~ml~~df~aiPd-l~f~ie~lvae~~~vaarl~Fdctp~G~i~Gip~nGkrV~Fse~vfy~  108 (131)
T COG5485          43 GLSGYREMLVRDFSAIPD-LSFEIERLVAEGDRVAARLTFDCTPSGEIMGIPPNGKRVRFSENVFYE  108 (131)
T ss_pred             chHHHHHHHHhhHhhCCC-cceEEEEEeecCCceEEEEEEccCcCceEeccCCCCcEEEeehhhhhh
Confidence            345677777777899999 999999999999999999999999999999999999999887666543

>PF12680 SnoaL_2: SnoaL-like domain; PDB: 3F40_A 3RGA_A 3G8Z_A 3DMC_A 3FH1_A 1TUH_A 3F14_A 3ER7_A 1Z1S_A 3F7X_A

Probab=98.35  E-value=3.7e-06  Score=57.96  Aligned_cols=62  Identities=21%  Similarity=0.458  Sum_probs=58.1

Q ss_pred             CCChHHHHHHHHHHHHhCCCCceeEEEEeeeCCCEEEEEEEEEeeeeccccccCCCCCEEEEEeEEEEEC
Q 043189          113 RADEETFKSSHDAFRSAFPRGFAWEVISVFSGPPVVAYKFRHWGYFEGPFQGHAPTGEMVEFYGIGIMKV  182 (182)
Q Consensus       113 ~~~~e~f~~s~~~f~~AFPdGf~wEVleV~s~pp~VafrwrhwGt~~G~F~G~~pTGk~Vei~Gi~i~rV  182 (182)
                      -.+++++.+....+...+|+ +.+++.+++++++.|++.|+..++       .+|||+.+.+.|+++++|
T Consensus        33 ~~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~gd~v~~~~~~~~~-------~~~~g~~~~~~~~~~~~~   94 (102)
T PF12680_consen   33 LRGREAIREFFEEFFESFPD-IRFEIHDIFADGDRVVVEWTVTGT-------TPPTGQPISFRGCSVFRF   94 (102)
T ss_dssp             EESHHHHHHHHHHHHHHEEE-EEEEEEEEEEETTEEEEEEEEEEE-------ETTTSCEEEEEEEEEEEE
T ss_pred             ccCHHHHHHHHHHHHhcCCc-eEEEEEEEEEcCCEEEEEEEEEEE-------EcCCCCEEEEEEEEEEEE
Confidence            45788999999999999999 999999999999999999999998       899999999999999885

...

>cd00781 ketosteroid_isomerase ketosteroid isomerase: Many biological reactions proceed by enzymatic cleavage of a C-H bond adjacent to carbonyl or a carboxyl group, leading to an enol or a enolate intermediate that is subsequently re-protonated at the same or an adjacent carbon

Probab=96.54  E-value=0.013  Score=43.01  Aligned_cols=60  Identities=15%  Similarity=0.042  Sum_probs=48.5

Q ss_pred             CCChHHHHHHHHHHHHhCCCCceeEEEEeeeCCCEEEEEEEEEeeeeccccccCCCCCEEEEEeEEEEEC
Q 043189          113 RADEETFKSSHDAFRSAFPRGFAWEVISVFSGPPVVAYKFRHWGYFEGPFQGHAPTGEMVEFYGIGIMKV  182 (182)
Q Consensus       113 ~~~~e~f~~s~~~f~~AFPdGf~wEVleV~s~pp~VafrwrhwGt~~G~F~G~~pTGk~Vei~Gi~i~rV  182 (182)
                      -.|++.+......+..++++ +.+.+..+.+.++.+++.|+..         ++++|+.+.+.|+++++|
T Consensus        43 ~~G~~~i~~~~~~~~~~~~~-~~~~~~~~~~~g~~~~~~~~~~---------~~~~g~~~~~~~~~v~~~  102 (122)
T cd00781          43 RSGRAAIAAFYAQSLGGAKR-LELTGPVRASHGGEAAFAFRVE---------FEWEGQPCVVRVIDVMRF  102 (122)
T ss_pred             ccCHHHHHHHHHHHhccCce-EEecCceeeecCCEEEEEEEEE---------EEeCCceEEEEEEEEEEE
Confidence            35778888888887777777 7777778888899999999865         335799999999999885

Ketosteroid isomerases are important members of this class of enzymes which are the most proficient of all enzymes known and have served as a paradigm for enzymatic enolizations since its discovery in 1954. This CD includes members of this class that calalyze the isomerization of various beta,gamma-unsaturated isomers at nearly a diffusion-controlled rate. These enzymes are widely distributed in bacteria.

>PF10184 DUF2358: Uncharacterized conserved protein (DUF2358); InterPro: IPR018790 This entry represents a family of conserved proteins

Probab=93.71  E-value=0.92  Score=34.44  Aligned_cols=61  Identities=16%  Similarity=0.206  Sum_probs=48.5

Q ss_pred             ChHHHHHH---HHHHHH-hCCCCceeEEEEeeeCCC-EEEEEEEEEeeeeccccccCCCCCEEEEEeEEEEEC
Q 043189          115 DEETFKSS---HDAFRS-AFPRGFAWEVISVFSGPP-VVAYKFRHWGYFEGPFQGHAPTGEMVEFYGIGIMKV  182 (182)
Q Consensus       115 ~~e~f~~s---~~~f~~-AFPdGf~wEVleV~s~pp-~VafrwrhwGt~~G~F~G~~pTGk~Vei~Gi~i~rV  182 (182)
                      |.+.++..   .+.+.. .|++ ...+|+++...++ .|..|||..|.-.-+      -..++.+.|.++++|
T Consensus        39 g~~~Y~~~~~~l~~l~~~~~~~-~~~~v~~i~~~~~~~I~~rW~~~g~~~l~------w~p~~~~~G~S~~~l  104 (113)
T PF10184_consen   39 GLDRYKRNLWALRFLGRLFFSD-PSLEVLSIEQDGEDTIRARWRLRGVPRLP------WRPRISFDGTSTYTL  104 (113)
T ss_pred             cHHHHHHHHHHHHHHHhhccCC-cEEEEEEEEECCCCEEEEEEEEEEEeCCC------cCCcEEEEEEEEEEE
Confidence            57788888   555666 5667 8999999999998 999999998875544      456778999998764

The function is unknown.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	182
3kkg_A	146	Putative snoal-like polyketide cyclase; structural	6e-10
3f9s_A	146	Putative polyketide cyclase; structural genomics,	6e-09
2gex_A	152	SNOL; alpha+beta barrel, oxidoreductase; 2.50A {St	2e-08
2f99_A	153	Aklanonic acid methyl ester cyclase, AKNH; anthrac	2e-08
2gey_A	158	ACLR protein; alpha+beta barrel, oxidoreductase; H	6e-08
3ehc_A	128	Snoal-like polyketide cyclase; structural genomics	2e-06
1sjw_A	144	Nogalonic acid methyl ester cyclase; anthracycline	3e-05
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	6e-04

>3kkg_A Putative snoal-like polyketide cyclase; structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2, lyase; HET: MSE PGE; 1.40A {Jannaschia SP} Length = 146

 Score = 54.1 bits (130), Expect = 6e-10
 Identities = 16/66 (24%), Positives = 27/66 (40%), Gaps = 1/66 (1%)

Query: 117 ETFKSSHDAFRSAFPRGFAWEVISVFSGPPVVAYKFRHWGYFEGPFQGHAPTGEMVEFYG 176
           E   + +      FP      V +V      V  + R  G  +GPF G  P+G+MV+   
Sbjct: 55  EQAIAFNAVLFEGFP-RLEVVVENVTVEGDNVVVQARLTGAQDGPFLGVPPSGQMVDVPD 113

Query: 177 IGIMKV 182
           + +  +
Sbjct: 114 VTLFTL 119

>3f9s_A Putative polyketide cyclase; structural genomics, joint center for structural genomics, J protein structure initiative; 1.76A {Acidithiobacillus ferrooxidans atcc 23} Length = 146

 Score = 51.4 bits (123), Expect = 6e-09
 Identities = 11/66 (16%), Positives = 24/66 (36%), Gaps = 1/66 (1%)

Query: 117 ETFKSSHDAFRSAFPRGFAWEVISVFSGPPVVAYKFRHWGYFEGPFQGHAPTGEMVEFYG 176
             +K      R+AFP    +++  +F+    V   +      +    G   TG+ ++  G
Sbjct: 54  AGYKERVKTLRAAFP-DQCFDIQGLFADGDAVVMTWLWTATHKEDIPGFPSTGKQIKMSG 112

Query: 177 IGIMKV 182
             +   
Sbjct: 113 ATVYYF 118

>2gex_A SNOL; alpha+beta barrel, oxidoreductase; 2.50A {Streptomyces nogalater} SCOP: d.17.4.9 Length = 152

 Score = 50.2 bits (120), Expect = 2e-08
 Identities = 15/66 (22%), Positives = 25/66 (37%), Gaps = 1/66 (1%)

Query: 117 ETFKSSHDAFRSAFPRGFAWEVISVFSGPPVVAYKFRHWGYFEGPFQGHAPTGEMVEFYG 176
           E      ++   AFP     +V S+      V  +       +G F G APTG  V +  
Sbjct: 46  EEVVRRMNSAVEAFP-DLRLDVRSIVGEGDRVMLRITCSATHQGVFMGIAPTGRKVRWTY 104

Query: 177 IGIMKV 182
           +  ++ 
Sbjct: 105 LEELRF 110

>2f99_A Aklanonic acid methyl ester cyclase, AKNH; anthracycline,polyketide cyclase,stereoselectivity, aklavino biosynthetic protein; HET: AKV; 1.90A {Streptomyces galilaeus} SCOP: d.17.4.9 PDB: 2f98_A* Length = 153

 Score = 50.3 bits (120), Expect = 2e-08
 Identities = 13/66 (19%), Positives = 22/66 (33%)

Query: 117 ETFKSSHDAFRSAFPRGFAWEVISVFSGPPVVAYKFRHWGYFEGPFQGHAPTGEMVEFYG 176
           E F  +    +  F      E + +      V  +   +G   G   G APTG +     
Sbjct: 55  ELFAINVAWVKKTFSEEARLEEVGIEERADWVRARLVLYGRHVGEMVGMAPTGRLFSGEQ 114

Query: 177 IGIMKV 182
           I ++  
Sbjct: 115 IHLLHF 120

>2gey_A ACLR protein; alpha+beta barrel, oxidoreductase; HET: PG4; 1.80A {Streptomyces galilaeus} SCOP: d.17.4.9 Length = 158

 Score = 48.7 bits (116), Expect = 6e-08
 Identities = 15/66 (22%), Positives = 26/66 (39%), Gaps = 1/66 (1%)

Query: 117 ETFKSSHDAFRSAFPRGFAWEVISVFSGPPVVAYKFRHWGYFEGPFQGHAPTGEMVEFYG 176
                  +    AFP     EV S+ +    VA +       +G F G  PTG+ V ++ 
Sbjct: 45  ADMVKLMEGGLKAFP-DLQLEVKSIMAEEDRVALRITVTATHQGEFMGVQPTGQRVSWHL 103

Query: 177 IGIMKV 182
           +  ++ 
Sbjct: 104 VEELRF 109

>3ehc_A Snoal-like polyketide cyclase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 2.12A {Agrobacterium tumefaciens str} Length = 128

 Score = 44.1 bits (104), Expect = 2e-06
 Identities = 8/66 (12%), Positives = 17/66 (25%), Gaps = 1/66 (1%)

Query: 117 ETFKSSHDAFRSAFPRGFAWEVISVFSGPPVVAYKFRHWGYFEGPFQGHAPTGEMVEFYG 176
             ++       +  P    +E   + S    +A +       +  F      G  V+F  
Sbjct: 42  SGYRDMLVKDFADIP-DLRFEAEILVSDATRLAARLFFDCTPKSIFMDLPVNGRRVQFCE 100

Query: 177 IGIMKV 182
                 
Sbjct: 101 HVFYDF 106

>1sjw_A Nogalonic acid methyl ester cyclase; anthracyclines, nogalamycin, snoal, aldol condensation, LYAS structural genomics; HET: NGV; 1.35A {Streptomyces nogalater} SCOP: d.17.4.9 Length = 144

 Score = 41.5 bits (97), Expect = 3e-05
 Identities = 12/66 (18%), Positives = 21/66 (31%)

Query: 117 ETFKSSHDAFRSAFPRGFAWEVISVFSGPPVVAYKFRHWGYFEGPFQGHAPTGEMVEFYG 176
           + F       R+ F      E + +    P V      +G   G   G  PT        
Sbjct: 46  KAFAQLVGWVRATFSEEARLEEVRIEERGPWVKAYLVLYGRHVGRLVGMPPTDRRFSGEQ 105

Query: 177 IGIMKV 182
           + +M++
Sbjct: 106 VHLMRI 111

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 38.7 bits (89), Expect = 6e-04
 Identities = 28/190 (14%), Positives = 58/190 (30%), Gaps = 42/190 (22%)

Query: 7   LNEEAKSTQWRHGGPPIFDKVNKLFEEG--RTKEWPKGSIE---ETVQNAVKSWEMELSH 61
           L  E  +       P     + +   +G      W   + +     +++++   E    +
Sbjct: 318 LPREVLT-----TNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPAE-Y 371

Query: 62  KTSLNDFKTINPE--KFKLIVNGR--KDLSGEETLQLGSYNALLKNSL----PKEFQYY- 112
           +   +   ++ P       I+      D+   + + +   N L K SL    PKE     
Sbjct: 372 RKMFDRL-SVFPPSAHIPTILLSLIWFDVIKSDVMVV--VNKLHKYSLVEKQPKESTISI 428

Query: 113 -------RADEETFKSSHDAFRSAF--PRGFAWEVISVFSGPPVVAYKFRHWGYFEGPFQ 163
                  +   E   + H +    +  P+ F  +       P +  Y + H G+      
Sbjct: 429 PSIYLELKVKLENEYALHRSIVDHYNIPKTFDSDD---LIPPYLDQYFYSHIGH------ 479

Query: 164 GHAPTGEMVE 173
            H    E  E
Sbjct: 480 -HLKNIEHPE 488

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	182
3kkg_A	146	Putative snoal-like polyketide cyclase; structural	99.59
3f9s_A	146	Putative polyketide cyclase; structural genomics,	99.56
3ehc_A	128	Snoal-like polyketide cyclase; structural genomics	99.53
2f99_A	153	Aklanonic acid methyl ester cyclase, AKNH; anthrac	99.48
1sjw_A	144	Nogalonic acid methyl ester cyclase; anthracycline	99.43
2gex_A	152	SNOL; alpha+beta barrel, oxidoreductase; 2.50A {St	99.41
2gey_A	158	ACLR protein; alpha+beta barrel, oxidoreductase; H	99.38
3f8h_A	150	Putative polyketide cyclase; structural genomics,	99.03
3i0y_A	140	Putative polyketide cyclase; cystatin-like fold, s	98.97
3f7x_A	151	Putative polyketide cyclase; structural genomics,	98.88
3k0z_A	159	Putative polyketide cyclase; structural genomics,	98.77
4h3u_A	158	Hypothetical protein; structural genomics, PSI-bio	98.65
3hk4_A	136	MLR7391 protein; NTF2-like protein, structural gen	98.62
3g0k_A	148	Putative membrane protein; snoal-like polyketide c	98.43
3er7_A	131	Uncharacterized NTF2-like protein; YP_001812677.1,	98.39
3ebt_A	132	Uncharacterized NTF2-like protein; structural geno	98.35
3fh1_A	129	Uncharacterized NTF2-like protein; structural geno	98.25
3grd_A	134	Uncharacterized NTF2-superfamily protein; NP_97724	98.25
3ec9_A	140	Uncharacterized NTF2-like protein; structural geno	98.23
3fgy_A	135	Uncharacterized NTF2-like protein; structural geno	98.21
3g8z_A	148	Protein of unknown function with cystatin-like FO;	98.15
3ff2_A	117	Uncharacterized cystatin fold protein (YP_497570.	98.13
3dm8_A	143	Uncharacterized protein RPA4348; siras, putative i	97.97
3rga_A	283	Epoxide hydrolase; NTF2-like, epoxide-opening cycl	97.79
3f14_A	112	Uncharacterized NTF2-like protein; YP_680363.1, NT	97.79
1nww_A	149	Limonene-1,2-epoxide hydrolase; HET: MES; 1.20A {R	97.74
2k54_A	123	Protein ATU0742; protein of unknown function, stru	97.69
1s5a_A	150	Hypothetical protein YESE; structural genomics, PS	97.66
1oh0_A	131	Steroid delta-isomerase; ketosteroid isomerase, KS	97.54
2a15_A	139	Hypothetical protein RV0760C; beta-alpha-barrel, s	97.35
1ohp_A	125	Steroid delta-isomerase; inhibitor; HET: ESR; 1.53	97.28
1tuh_A	156	BAL32A, hypothetical protein EGC068; unknown funct	97.22
3jum_A	185	Phenazine biosynthesis protein A/B; chirality, dru	97.21
3ff0_A	163	Phenazine biosynthesis protein PHZB 2; cystatin-li	97.09
1z1s_A	163	Hypothetical protein PA3332; beta barrel, conserve	96.98
3g16_A	156	Uncharacterized protein with cystatin-like fold; Y	96.96
3h3h_A	122	Uncharacterized snoal-like protein; structural gen	96.76
3dxo_A	121	Uncharacterized snoal-like protein; putative isome	96.73
3dmc_A	134	NTF2-like protein; structural genomics, joint cent	96.62
3rga_A	283	Epoxide hydrolase; NTF2-like, epoxide-opening cycl	96.61
2bng_A	149	MB2760; epoxide hydrolase, limonene, hydrolase, st	96.55
1tp6_A	128	Hypothetical protein PA1314; structural genomics,	94.48
3lyg_A	120	NTF2-like protein of unknown function; structural	93.99
3hx8_A	129	MLR2180 protein, putative ketosteroid isomerase; s	93.3
3d9r_A	135	Ketosteroid isomerase-like protein; YP_049581.1, s	92.08
3en8_A	128	Uncharacterized NTF-2 like protein; YP_553245.1, N	91.27
3mso_A	143	Steroid delta-isomerase; structural genomics, join	88.55
3f8x_A	148	Putative delta-5-3-ketosteroid isomerase; structur	80.06

>3kkg_A Putative snoal-like polyketide cyclase; structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2, lyase; HET: MSE PGE; 1.40A {Jannaschia SP}

Probab=99.59  E-value=1.4e-15  Score=114.34  Aligned_cols=69  Identities=25%  Similarity=0.339  Sum_probs=66.3

Q ss_pred             CCChHHHHHHHHHHHHhCCCCceeEEEEeeeCCCEEEEEEEEEeeeeccccccCCCCCEEEEEeEEEEEC
Q 043189          113 RADEETFKSSHDAFRSAFPRGFAWEVISVFSGPPVVAYKFRHWGYFEGPFQGHAPTGEMVEFYGIGIMKV  182 (182)
Q Consensus       113 ~~~~e~f~~s~~~f~~AFPdGf~wEVleV~s~pp~VafrwrhwGt~~G~F~G~~pTGk~Vei~Gi~i~rV  182 (182)
                      ..|++++.+....++.+||+ +.++|++++++++.|+++|+..|||.|+|+|++|||+++++.|++++||
T Consensus        51 ~~G~~~~~~~~~~~~~~~pd-~~~~i~~~~~~gd~v~~~~~~~gt~~g~~~g~~~tG~~~~~~~~~~~~~  119 (146)
T 3kkg_A           51 VEGIEQAIAFNAVLFEGFPR-LEVVVENVTVEGDNVVVQARLTGAQDGPFLGVPPSGQMVDVPDVTLFTL  119 (146)
T ss_dssp             EESHHHHHHHHHHHHHHSTT-CEEEEEEEEEETTEEEEEEEEEEECCSCBTTBCCCCCEEEEEEEEEEEE
T ss_pred             CCCHHHHHHHHHHHHHhCCC-ceeEEEEEEEeCCEEEEEEEEEEEecCccCCcCCCCCEEEEEEEEEEEE
Confidence            35889999999999999999 9999999999999999999999999999999999999999999999986

>3f9s_A Putative polyketide cyclase; structural genomics, joint center for structural genomics, J protein structure initiative; 1.76A {Acidithiobacillus ferrooxidans atcc 23}

Probab=99.56  E-value=2.6e-15  Score=112.55  Aligned_cols=69  Identities=17%  Similarity=0.349  Sum_probs=66.2

Q ss_pred             CCChHHHHHHHHHHHHhCCCCceeEEEEeeeCCCEEEEEEEEEeeeeccccccCCCCCEEEEEeEEEEEC
Q 043189          113 RADEETFKSSHDAFRSAFPRGFAWEVISVFSGPPVVAYKFRHWGYFEGPFQGHAPTGEMVEFYGIGIMKV  182 (182)
Q Consensus       113 ~~~~e~f~~s~~~f~~AFPdGf~wEVleV~s~pp~VafrwrhwGt~~G~F~G~~pTGk~Vei~Gi~i~rV  182 (182)
                      ..+++++.+....++++||+ +.+++.+++++++.|+++|+..|||+|+|.|++|||+++++.|++++||
T Consensus        50 ~~G~~~~~~~~~~~~~~~pd-~~~~i~~~~~~gd~v~~~~~~~gt~~g~~~g~~~tG~~~~~~~~~~~~~  118 (146)
T 3f9s_A           50 ELDVAGYKERVKTLRAAFPD-QCFDIQGLFADGDAVVMTWLWTATHKEDIPGFPSTGKQIKMSGATVYYF  118 (146)
T ss_dssp             EECHHHHHHHHHHHHHHSTT-CEEEEEEEEEETTEEEEEEEEEEECCSCBTTBCCCCCEEEEEEEEEEEE
T ss_pred             cCCHHHHHHHHHHHHhhCCC-cEEEEEEEEEeCCEEEEEEEEEEEecCCCCCcCCCCCEEEEEEEEEEEE
Confidence            35889999999999999999 9999999999999999999999999999999999999999999999985

>3ehc_A Snoal-like polyketide cyclase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 2.12A {Agrobacterium tumefaciens str}

Probab=99.53  E-value=1.4e-14  Score=106.63  Aligned_cols=68  Identities=12%  Similarity=0.045  Sum_probs=65.5

Q ss_pred             CChHHHHHHHHHHHHhCCCCceeEEEEeeeCCCEEEEEEEEEeeeeccccccCCCCCEEEEEeEEEEEC
Q 043189          114 ADEETFKSSHDAFRSAFPRGFAWEVISVFSGPPVVAYKFRHWGYFEGPFQGHAPTGEMVEFYGIGIMKV  182 (182)
Q Consensus       114 ~~~e~f~~s~~~f~~AFPdGf~wEVleV~s~pp~VafrwrhwGt~~G~F~G~~pTGk~Vei~Gi~i~rV  182 (182)
                      .+++++.+.+..++++||+ +.++|.+++++++.|+.+|+..|||+|+|.|++|||+++++.|++++||
T Consensus        39 ~G~~~~~~~~~~~~~~~pd-~~~~i~~~~~~gd~v~~~~~~~gt~~g~~~g~~~tG~~~~~~~~~~~~~  106 (128)
T 3ehc_A           39 FGLSGYRDMLVKDFADIPD-LRFEAEILVSDATRLAARLFFDCTPKSIFMDLPVNGRRVQFCEHVFYDF  106 (128)
T ss_dssp             CHHHHHHHHHHHHHHHCTT-CCCCEEEEEECSSEEEEEEEEEECCSSEETTEECTTCCEEEEEEEEEEE
T ss_pred             CCHHHHHHHHHHHHhhCCC-ceEEEEEEEEECCEEEEEEEEEEEEcCcccCCCCCCCEEEEEEEEEEEE
Confidence            4788999999999999999 9999999999999999999999999999999999999999999999986

>2f99_A Aklanonic acid methyl ester cyclase, AKNH; anthracycline,polyketide cyclase,stereoselectivity, aklavino biosynthetic protein; HET: AKV; 1.90A {Streptomyces galilaeus} SCOP: d.17.4.9 PDB: 2f98_A*

Probab=99.48  E-value=2.5e-14  Score=109.19  Aligned_cols=68  Identities=19%  Similarity=0.256  Sum_probs=65.8

Q ss_pred             CChHHHHHHHHHHHHhCC-CCceeEEEEeeeCCCEEEEEEEEEeeeeccccccCCCCCEEEEEeEEEEEC
Q 043189          114 ADEETFKSSHDAFRSAFP-RGFAWEVISVFSGPPVVAYKFRHWGYFEGPFQGHAPTGEMVEFYGIGIMKV  182 (182)
Q Consensus       114 ~~~e~f~~s~~~f~~AFP-dGf~wEVleV~s~pp~VafrwrhwGt~~G~F~G~~pTGk~Vei~Gi~i~rV  182 (182)
                      .|++++.+....+..+|| + +.+++++++++++.|+++|+..|||.|+|+|++|||+++++.|++++||
T Consensus        52 ~G~~~~~~~~~~~~~~~p~d-~~~~i~~~~~~gd~v~~~~~~~gt~~g~~~g~~~tG~~~~~~~~~~~~v  120 (153)
T 2f99_A           52 RGPELFAINVAWVKKTFSEE-ARLEEVGIEERADWVRARLVLYGRHVGEMVGMAPTGRLFSGEQIHLLHF  120 (153)
T ss_dssp             CHHHHHHHHHHHHHHHHCTT-CEEEEEEEEEETTEEEEEEEEEEECCSCBTTBCCCCCEEEEEEEEEEEE
T ss_pred             CCHHHHHHHHHHHHHHCCCC-cEEEEEEEEEeCCEEEEEEEEEEEecCCCCCcCCCCCEEEEEEEEEEEE
Confidence            588999999999999999 8 9999999999999999999999999999999999999999999999985

>1sjw_A Nogalonic acid methyl ester cyclase; anthracyclines, nogalamycin, snoal, aldol condensation, LYAS structural genomics; HET: NGV; 1.35A {Streptomyces nogalater} SCOP: d.17.4.9

Probab=99.43  E-value=5.3e-13  Score=98.93  Aligned_cols=68  Identities=18%  Similarity=0.240  Sum_probs=65.7

Q ss_pred             CChHHHHHHHHHHHHhCC-CCceeEEEEeeeCCCEEEEEEEEEeeeeccccccCCCCCEEEEEeEEEEEC
Q 043189          114 ADEETFKSSHDAFRSAFP-RGFAWEVISVFSGPPVVAYKFRHWGYFEGPFQGHAPTGEMVEFYGIGIMKV  182 (182)
Q Consensus       114 ~~~e~f~~s~~~f~~AFP-dGf~wEVleV~s~pp~VafrwrhwGt~~G~F~G~~pTGk~Vei~Gi~i~rV  182 (182)
                      .|++++.+....+.++|| + +.+++++++++++.|+.+|+..|+|+|+|+|++|||+++++.|++++||
T Consensus        43 ~G~~~~~~~~~~~~~~~~~~-~~~~i~~~~~~gd~v~~~~~~~gt~~g~~~G~~~tG~~~~~~~~~~~~~  111 (144)
T 1sjw_A           43 TGPKAFAQLVGWVRATFSEE-ARLEEVRIEERGPWVKAYLVLYGRHVGRLVGMPPTDRRFSGEQVHLMRI  111 (144)
T ss_dssp             SHHHHHHHHHHHHHHHHCTT-CEEEEEEEEEETTEEEEEEEEEEECCSCBTTBCCCCCEEEEEEEEEEEE
T ss_pred             CCHHHHHHHHHHHHHhCCCC-cEEEEEEEEEeCCEEEEEEEEEEEecCCCCCcCCCCCEEEEEEEEEEEE
Confidence            588999999999999999 8 9999999999999999999999999999999999999999999999985

>2gex_A SNOL; alpha+beta barrel, oxidoreductase; 2.50A {Streptomyces nogalater} SCOP: d.17.4.9

Probab=99.41  E-value=1.2e-12  Score=99.07  Aligned_cols=68  Identities=22%  Similarity=0.312  Sum_probs=65.7

Q ss_pred             CChHHHHHHHHHHHHhCCCCceeEEEEeeeCCCEEEEEEEEEeeeeccccccCCCCCEEEEEeEEEEEC
Q 043189          114 ADEETFKSSHDAFRSAFPRGFAWEVISVFSGPPVVAYKFRHWGYFEGPFQGHAPTGEMVEFYGIGIMKV  182 (182)
Q Consensus       114 ~~~e~f~~s~~~f~~AFPdGf~wEVleV~s~pp~VafrwrhwGt~~G~F~G~~pTGk~Vei~Gi~i~rV  182 (182)
                      .|++++.+....+..+||+ +.+++.+++++++.|+++|+..||++|+|+|+||||+++++.|++++||
T Consensus        43 ~G~~~~~~~~~~~~~~~~~-~~~~i~~~~~~gd~v~~~~~~~gt~~g~~~G~~~tG~~~~~~~~~~~~~  110 (152)
T 2gex_A           43 VSAEEVVRRMNSAVEAFPD-LRLDVRSIVGEGDRVMLRITCSATHQGVFMGIAPTGRKVRWTYLEELRF  110 (152)
T ss_dssp             ECHHHHHHHHHHHHHHCTT-CEEEEEEEEEETTEEEEEEEEEEECCSCBTTBCCCCCEEEEEEEEEEEE
T ss_pred             CCHHHHHHHHHHHHHhCCC-cEEEEEEEEEeCCEEEEEEEEEEEecCCcCCcCCCCCEEEEEEEEEEEE
Confidence            4889999999999999999 9999999999999999999999999999999999999999999999985

>2gey_A ACLR protein; alpha+beta barrel, oxidoreductase; HET: PG4; 1.80A {Streptomyces galilaeus} SCOP: d.17.4.9

Probab=99.38  E-value=2.9e-12  Score=97.93  Aligned_cols=68  Identities=22%  Similarity=0.310  Sum_probs=65.5

Q ss_pred             CChHHHHHHHHHHHHhCCCCceeEEEEeeeCCCEEEEEEEEEeeeeccccccCCCCCEEEEEeEEEEEC
Q 043189          114 ADEETFKSSHDAFRSAFPRGFAWEVISVFSGPPVVAYKFRHWGYFEGPFQGHAPTGEMVEFYGIGIMKV  182 (182)
Q Consensus       114 ~~~e~f~~s~~~f~~AFPdGf~wEVleV~s~pp~VafrwrhwGt~~G~F~G~~pTGk~Vei~Gi~i~rV  182 (182)
                      .|++++.+....+..+||+ +.+++.+++++++.|+++|+..|++.|+|.|++|||+++++.|++++||
T Consensus        42 ~G~~~~~~~~~~~~~~~~~-~~~~i~~~~~~gd~v~~~~~~~gt~~g~~~G~~~tG~~~~~~~~~~~~~  109 (158)
T 2gey_A           42 VSSADMVKLMEGGLKAFPD-LQLEVKSIMAEEDRVALRITVTATHQGEFMGVQPTGQRVSWHLVEELRF  109 (158)
T ss_dssp             ECHHHHHHHHHHHHHHSTT-CEEEEEEEEEETTEEEEEEEEEEECCSCBTTBCCCCCEEEEEEEEEEEE
T ss_pred             CCHHHHHHHHHHHHHhCCC-cEEEEEEEEEeCCEEEEEEEEEEEecCCCCCcCCCCCEEEEEEEEEEEE
Confidence            4789999999999999999 9999999999999999999999999999999999999999999999985

>3f8h_A Putative polyketide cyclase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, unknown function; HET: MSE; 2.00A {Silicibacter SP}

Probab=99.03  E-value=8.9e-10  Score=84.46  Aligned_cols=68  Identities=7%  Similarity=0.091  Sum_probs=58.9

Q ss_pred             CChHHHHHHHHHHHHhCCCCceeEEEEee-eCCCEEEEEEEEEeeeeccccccC-CCCCEEEEEeEEEEEC
Q 043189          114 ADEETFKSSHDAFRSAFPRGFAWEVISVF-SGPPVVAYKFRHWGYFEGPFQGHA-PTGEMVEFYGIGIMKV  182 (182)
Q Consensus       114 ~~~e~f~~s~~~f~~AFPdGf~wEVleV~-s~pp~VafrwrhwGt~~G~F~G~~-pTGk~Vei~Gi~i~rV  182 (182)
                      .|++.+.+....+.++||+ ...++.-+. ++|++|+++|+..|+|.|+|.|+| |||++|++.|+.++||
T Consensus        58 ~G~e~i~~~~~~~~~~~~~-~~~~~~~~~~~~gd~v~~~~~~~gt~~g~~~G~p~~tG~~v~~~~~~~~~~  127 (150)
T 3f8h_A           58 VGKEKFAAFCAHMSHCYKE-ELTDMVIFATPDATRAAAEYTVNGTYLATDEGLPEARQQSYKLPAGSFFDL  127 (150)
T ss_dssp             ESHHHHHHHHHHHHHHEEE-EEEEEEEEECTTSSEEEEEEEEEEEECSCCTTSCCCSSEEEEEEEEEEEEE
T ss_pred             eCHHHHHHHHHHHHHhCCc-cccceEEEEecCCCEEEEEEEEEEEEecCCCCCcCCCCCEEEEeeeEEEEE
Confidence            4788999999999999998 433433333 689999999999999999999999 9999999999999986

>3i0y_A Putative polyketide cyclase; cystatin-like fold, structural genomics, joint center for ST genomics, JCSG, protein structure initiative; HET: MSE UNL; 1.50A {Xanthomonas campestris PV}

Probab=98.97  E-value=2.1e-09  Score=78.84  Aligned_cols=66  Identities=15%  Similarity=0.201  Sum_probs=55.0

Q ss_pred             ChHHHHHHHHHHHHhCCCCceeEEEEee--eCCCEEEEEEEEEeeeeccccccC-CCCCEEEEEeEEEEEC
Q 043189          115 DEETFKSSHDAFRSAFPRGFAWEVISVF--SGPPVVAYKFRHWGYFEGPFQGHA-PTGEMVEFYGIGIMKV  182 (182)
Q Consensus       115 ~~e~f~~s~~~f~~AFPdGf~wEVleV~--s~pp~VafrwrhwGt~~G~F~G~~-pTGk~Vei~Gi~i~rV  182 (182)
                      |++.+......+..+||.  .++.+.+.  ++|++|+.+|+..|||.|+|.|+| |||+++++.|+.++||
T Consensus        49 G~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~gd~v~~~~~~~gt~~g~~~g~p~~tG~~~~~~~~~~~~~  117 (140)
T 3i0y_A           49 GRAAFASFLQRMNDSYRE--QLRDIVVTANDEGTRVGAEYVVHGVYHTTDEGLPDANGQTYVLPGGAFFDV  117 (140)
T ss_dssp             SHHHHHHHHHHHHHHEEE--EEEEEEEEECTTSSEEEEEEEEEEEECSCCTTSSCCSCEEEEEEEEEEEEE
T ss_pred             cHHHHHHHHHHHhhhcch--hhhheeeeecccCCEEEEEEEEEEEeecccCCCcCCCCCEEEEEeeEEEEE
Confidence            667888888888888763  34333332  789999999999999999999998 9999999999999985

>3f7x_A Putative polyketide cyclase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL; 1.24A {Pseudomonas putida KT2440}

Probab=98.88  E-value=6.9e-09  Score=79.38  Aligned_cols=104  Identities=11%  Similarity=0.156  Sum_probs=75.2

Q ss_pred             CHHHHHHHhHheeeeeccccCCcccceeeccceeEEEECCCccCchhhhhhcCccccccccCCCCccccCCCChHHHHHH
Q 043189           43 SIEETVQNAVKSWEMELSHKTSLNDFKTINPEKFKLIVNGRKDLSGEETLQLGSYNALLKNSLPKEFQYYRADEETFKSS  122 (182)
Q Consensus        43 SLe~~VqnlvktwemE~shK~~~~dw~si~~~~f~~s~Ngg~~~~~~~~~~~G~Yn~~l~~~lp~~~~~Y~~~~e~f~~s  122 (182)
                      ...++|+.+...|     -+-|++.+.++-.+.+.+..+.|.                           --.|++.+.+.
T Consensus        21 ~~~~lv~~~~~a~-----~~~D~~~l~~l~a~D~v~~~p~g~---------------------------~~~G~e~i~~~   68 (151)
T 3f7x_A           21 TATELVNAYYAAF-----NAGDMPAFLALLSEDVIHDINQGE---------------------------RQMGKARFAAF   68 (151)
T ss_dssp             CHHHHHHHHHHHH-----HHTCHHHHHHTEEEEEEEECTTSC---------------------------EEESHHHHHHH
T ss_pred             HHHHHHHHHHHHH-----HcCCHHHHHHhcCCCEEEECCCCC---------------------------CcCCHHHHHHH
Confidence            3456777776544     345666666655555554332221                           02367788888


Q ss_pred             HHHHHHhCCCCceeEEEEee----eCCCEEEEEEEEEeeeeccccccC-CCCCEEEEEeEEEEEC
Q 043189          123 HDAFRSAFPRGFAWEVISVF----SGPPVVAYKFRHWGYFEGPFQGHA-PTGEMVEFYGIGIMKV  182 (182)
Q Consensus       123 ~~~f~~AFPdGf~wEVleV~----s~pp~VafrwrhwGt~~G~F~G~~-pTGk~Vei~Gi~i~rV  182 (182)
                      ...+.++|+    .++.+++    ++|++|+.+|+..|+|.|+|.|+| |||+++++.++.++||
T Consensus        69 ~~~~~~~~~----~~~~~~~~~~~~~gd~v~~~~~~~gt~~g~~~G~p~~tG~~~~~~~~~~~~~  129 (151)
T 3f7x_A           69 MEKMNRCYR----ERLADIVVMQNADGSRAAAEFTVHGQYLADDEGLPTANGQTYVLPAGAFFYI  129 (151)
T ss_dssp             HHHHHHHEE----EEEEEEEEEECTTSSEEEEEEEEEEEECSCCTTSCCCSSCEEEEEEEEEEEE
T ss_pred             HHHHHHhhc----cceeEEEEEEecCCCEEEEEEEEEEEEeccCCCCcCCCCCEEEEEEEEEEEE
Confidence            887777774    3444444    999999999999999999999999 9999999999999985

>3k0z_A Putative polyketide cyclase; structural genomics, joint CENT structural genomics, JCSG, protein structure initiative, PS lipoprotein; HET: NHE; 1.91A {Bacillus cereus}

Probab=98.77  E-value=2.2e-08  Score=77.22  Aligned_cols=60  Identities=20%  Similarity=0.359  Sum_probs=56.6

Q ss_pred             CCChHHHHHHHHHHHHhCCCCceeEEEEeeeCCCEEEEEEEEEeeeeccccccCCCCCEEEEEeEEEEEC
Q 043189          113 RADEETFKSSHDAFRSAFPRGFAWEVISVFSGPPVVAYKFRHWGYFEGPFQGHAPTGEMVEFYGIGIMKV  182 (182)
Q Consensus       113 ~~~~e~f~~s~~~f~~AFPdGf~wEVleV~s~pp~VafrwrhwGt~~G~F~G~~pTGk~Vei~Gi~i~rV  182 (182)
                      ..|++++.+....++++||+ +.+++.+++++|+.|+++|+..|+|.         |+++++.|++++||
T Consensus        73 ~~G~e~~~~~~~~~~~~~pd-~~~~i~~~~~~gd~v~~~~~~~gt~~---------G~~v~~~~~~i~r~  132 (159)
T 3k0z_A           73 PQGTEGLKFAAQNFRKIVPN-IHCEIEDLLVVGDKVTARLSFTGTHN---------DKKIDFFAIDILHV  132 (159)
T ss_dssp             CSSHHHHHHHHHHHHTTCCS-EEEEEEEEEEETTEEEEEEEEEEEET---------TEEEEEEEEEEEEE
T ss_pred             CCCHHHHHHHHHHHHHhCCC-cEEEEEEEEEECCEEEEEEEEEEEEC---------CeEEEEEEEEEEEE
Confidence            35889999999999999999 99999999999999999999999987         99999999999985

>4h3u_A Hypothetical protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 1.15A {Catenulispora acidiphila}

Probab=98.65  E-value=7.3e-08  Score=73.33  Aligned_cols=61  Identities=5%  Similarity=-0.013  Sum_probs=57.0

Q ss_pred             CChHHHHHHHHHHHHhCCCCceeEEEEeeeCCCEEEEEEEEEeeeeccccccCCCCCEEEEEeEEEEEC
Q 043189          114 ADEETFKSSHDAFRSAFPRGFAWEVISVFSGPPVVAYKFRHWGYFEGPFQGHAPTGEMVEFYGIGIMKV  182 (182)
Q Consensus       114 ~~~e~f~~s~~~f~~AFPdGf~wEVleV~s~pp~VafrwrhwGt~~G~F~G~~pTGk~Vei~Gi~i~rV  182 (182)
                      .|++.++..+..+.++||+ +.++|.+++++|++|+++|+..|++.       +||++|++.|+++++|
T Consensus        66 ~Greai~~~~~~~~~~~~d-~~~~v~~~~~~gd~v~~~~~~~gt~~-------~tG~~~~~~~~~v~~~  126 (158)
T 4h3u_A           66 TGREQISGWKARTDAMIEN-VHVTITKAYRAGDHVTIEAVYGGHIK-------GAPTPFAVPMATLLRT  126 (158)
T ss_dssp             ESHHHHHHHHHHHHHHEEE-EEEEEEEEEEETTEEEEEEEEEEEET-------TSSSCEEEEEEEEEEE
T ss_pred             ecchhhhhhhhhhhccCCc-cceeEeEEeecCceEEEEEEEEEEec-------CccCcceeeeEEEEEE
Confidence            4889999999999999999 99999999999999999999999975       4999999999999985

>3hk4_A MLR7391 protein; NTF2-like protein, structural genomics, joint center for STR genomics, JCSG, protein structure initiative, PSI-2, lyase; HET: MSE; 1.96A {Mesorhizobium loti}

Probab=98.62  E-value=1e-07  Score=73.22  Aligned_cols=62  Identities=16%  Similarity=0.194  Sum_probs=57.0

Q ss_pred             CCChHHHHHHHHHHHHhCCCCceeEEEEeeeCCCEEEEEEEEEeeeeccccccCCCCCEEEEEeEEEEEC
Q 043189          113 RADEETFKSSHDAFRSAFPRGFAWEVISVFSGPPVVAYKFRHWGYFEGPFQGHAPTGEMVEFYGIGIMKV  182 (182)
Q Consensus       113 ~~~~e~f~~s~~~f~~AFPdGf~wEVleV~s~pp~VafrwrhwGt~~G~F~G~~pTGk~Vei~Gi~i~rV  182 (182)
                      -.|++.+++....|+.+||. ..++|.++++.+++|+++|+..|||.       |||++|++.|++|+||
T Consensus        63 ~~G~eai~~~~~~~~~~~~~-~~~~i~~~~v~gd~v~v~~~~~gth~-------~tG~~i~~~~i~v~rv  124 (136)
T 3hk4_A           63 SHGKEALRQKSQWWQENHEV-HGGSVEGPYVNGDQFALRFKFDVTPK-------ATGERVTMDEVGLYTV  124 (136)
T ss_dssp             EESHHHHHHHHHHHHHTEEE-EEEEEEEEEEETTEEEEEEEEEEEET-------TTCCCEEEEEEEEEEE
T ss_pred             cCCHHHHHHHHHHHHhcCCe-eeeeecceEEcCCEEEEEEEEEEEEC-------CCCcEEEEEEEEEEEE
Confidence            35889999999999999996 78899999999999999999999994       7999999999999986

>3g0k_A Putative membrane protein; snoal-like polyketide cyclase, structural genomics, joint CE structural genomics, JCSG; HET: MSE; 1.30A {Novosphingobium aromaticivorans}

Probab=98.43  E-value=1.4e-07  Score=72.57  Aligned_cols=58  Identities=17%  Similarity=0.121  Sum_probs=50.7

Q ss_pred             CCChHHHHHHHHHHHHhCCCCceeEEEEeeeCCCEEEEEEEEEeeeeccccccCCCCCEEEEEeEEEEEC
Q 043189          113 RADEETFKSSHDAFRSAFPRGFAWEVISVFSGPPVVAYKFRHWGYFEGPFQGHAPTGEMVEFYGIGIMKV  182 (182)
Q Consensus       113 ~~~~e~f~~s~~~f~~AFPdGf~wEVleV~s~pp~VafrwrhwGt~~G~F~G~~pTGk~Vei~Gi~i~rV  182 (182)
                      ..|+++|......++++||+ +.++|.+++++||.|+++|+..+         .|+|+  .+.+++|+||
T Consensus        65 ~~G~e~~~~~~~~~~~~~pd-~~~~i~~iiaeGD~V~~~~~~~~---------~~~g~--~~~~~difr~  122 (148)
T 3g0k_A           65 EPSVEALKGFLDRVRAESPD-ARQTIHRSFVDGDHVITHTHVER---------WPGDA--GLAVVDIFRV  122 (148)
T ss_dssp             CSSHHHHHHHHHHHHHHCCS-CEEEEEEEEEETTEEEEEEEEEC---------STTCC--CEEEEEEEEE
T ss_pred             CCCHHHHHHHHHHHHHhCCC-ceEEEEEEEEECCEEEEEEEEEE---------CCCCc--cEEEEEEEEE
Confidence            36899999999999999999 99999999999999999999763         26675  5688999885

>3er7_A Uncharacterized NTF2-like protein; YP_001812677.1, NTF2-like protein of unknown function, struc genomics; HET: MSE; 1.50A {Exiguobacterium sibiricum 255-15} SCOP: d.17.4.24

Probab=98.39  E-value=4.5e-07  Score=69.69  Aligned_cols=60  Identities=10%  Similarity=0.061  Sum_probs=53.3

Q ss_pred             CChHHHHHHHHHHHHhCCCCceeEEE--EeeeCCCEEEEEEEEEeeeeccccccCCCCCEEEEEeEEEEEC
Q 043189          114 ADEETFKSSHDAFRSAFPRGFAWEVI--SVFSGPPVVAYKFRHWGYFEGPFQGHAPTGEMVEFYGIGIMKV  182 (182)
Q Consensus       114 ~~~e~f~~s~~~f~~AFPdGf~wEVl--eV~s~pp~VafrwrhwGt~~G~F~G~~pTGk~Vei~Gi~i~rV  182 (182)
                      .|++.+++++..|+.|||+ ..+.+.  .+.++++.|+++|+..|+        +++|++|++.|++|++|
T Consensus        46 ~G~~ai~~F~~~~~~a~~~-~~~~~~~~v~~~~gd~~~~~w~~~g~--------~~~G~~~~~~g~dv~~f  107 (131)
T 3er7_A           46 HGIDAWKQFVRMVFTANQD-IKHMYAGWVPSETGDTMETRWAVCGK--------SADGSVFTQDGTDIARL  107 (131)
T ss_dssp             ESHHHHHHHHHHHHHHEEE-EEEEECCCEECSSTTCEEEEEEEEEE--------ETTSCEEEEEEEEEEEE
T ss_pred             CChHHHHHHHHHHHhhCcC-ceEEEEEEEEecCCCEEEEEEEEEEE--------ECCCCEEEEeeeEEEEE
Confidence            6999999999999999999 775544  446788999999999999        89999999999999986

>3ebt_A Uncharacterized NTF2-like protein; structural genomics, joint center for structural genomics, J protein structure initiative; 1.30A {Burkholderia pseudomallei K96243} SCOP: d.17.4.9

Probab=98.35  E-value=6.1e-07  Score=64.95  Aligned_cols=60  Identities=3%  Similarity=-0.067  Sum_probs=54.2

Q ss_pred             CChHHHHHHHHHHHHhCCCCceeEEEEeeeCCCEEEEEEEEEeeeeccccccCCCCCEEEEEeEEEEEC
Q 043189          114 ADEETFKSSHDAFRSAFPRGFAWEVISVFSGPPVVAYKFRHWGYFEGPFQGHAPTGEMVEFYGIGIMKV  182 (182)
Q Consensus       114 ~~~e~f~~s~~~f~~AFPdGf~wEVleV~s~pp~VafrwrhwGt~~G~F~G~~pTGk~Vei~Gi~i~rV  182 (182)
                      .|++.+......+..+||+ +.+++.+++++++.|++.|++.        |.+|||+++++.++.++||
T Consensus        50 ~G~~~~~~~~~~~~~~~~~-~~~~~~~~~~~gd~v~v~~~~~--------~~~~~G~~~~~~~~~v~~~  109 (132)
T 3ebt_A           50 HGHDEVIAFIRHVPTHIAE-MRLAPDEFIESGERIVVLGTRR--------VTAVNGRSATLKFVHVWRF  109 (132)
T ss_dssp             EHHHHHHHHHHHGGGTEEE-EEEEEEEEEEETTEEEEEEEEE--------EEETTSCEEEEEEEEEEEE
T ss_pred             cCHHHHHHHHHHHHhhCCc-eEEEEeEEEEeCCEEEEEEEEE--------EEeCCCCEEeeeEEEEEEE
Confidence            4788999999999999998 9999999999999999998865        4589999999999999985

>3fh1_A Uncharacterized NTF2-like protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 1.60A {Mesorhizobium loti}

Probab=98.25  E-value=5.7e-07  Score=66.05  Aligned_cols=55  Identities=16%  Similarity=0.305  Sum_probs=50.2

Q ss_pred             CChHHHHHHHHHHHHhCCCCceeEEEEeeeCCCEEEEEEEEEeeeeccccccCCCCCEEEEEeEEEEEC
Q 043189          114 ADEETFKSSHDAFRSAFPRGFAWEVISVFSGPPVVAYKFRHWGYFEGPFQGHAPTGEMVEFYGIGIMKV  182 (182)
Q Consensus       114 ~~~e~f~~s~~~f~~AFPdGf~wEVleV~s~pp~VafrwrhwGt~~G~F~G~~pTGk~Vei~Gi~i~rV  182 (182)
                      .|++.+...+.. ..+||+ +.+++.+++++++.|+++|+..|            |+++++.|++++||
T Consensus        61 ~G~~~i~~~~~~-~~~~~~-~~~~i~~~~~~gd~v~~~~~~~~------------G~~~~~~~~~~~~~  115 (129)
T 3fh1_A           61 AGRQACVQLWSA-IATQPG-TRFDLEETFVAGDRATIRWRYWM------------ADGNSVRGVNLMRV  115 (129)
T ss_dssp             ESHHHHHHHHHH-HHHCTT-CEEEEEEEEEETTEEEEEEEEEC------------TTSCEEEEEEEEEE
T ss_pred             cCHHHHHHHHHH-HhcCCC-ceEEEeEEEEcCCEEEEEEEEEC------------CCeeEEeceEEEEE
Confidence            588999999988 899999 99999999999999999998755            88999999999985

>3grd_A Uncharacterized NTF2-superfamily protein; NP_977240.1, NTF2-superfamily protein with unknown function, structural genomics; HET: MSE; 1.25A {Bacillus cereus atcc 10987} SCOP: d.17.4.0

Probab=98.25  E-value=4e-06  Score=61.06  Aligned_cols=61  Identities=16%  Similarity=0.138  Sum_probs=54.8

Q ss_pred             CChHHHH-HHHHHHHHhCCCCceeEEEEe--eeCCCEEEEEEEEEeeeeccccccCCCCCEEEEEeEEEEEC
Q 043189          114 ADEETFK-SSHDAFRSAFPRGFAWEVISV--FSGPPVVAYKFRHWGYFEGPFQGHAPTGEMVEFYGIGIMKV  182 (182)
Q Consensus       114 ~~~e~f~-~s~~~f~~AFPdGf~wEVleV--~s~pp~VafrwrhwGt~~G~F~G~~pTGk~Vei~Gi~i~rV  182 (182)
                      .|++.+. ..+..+.++||+ +.+++.++  +++|++|+..|+..|++       +|||+++++.++.|+||
T Consensus        48 ~G~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~gd~v~v~~~~~~~~-------~~tG~~~~~~~~~v~~~  111 (134)
T 3grd_A           48 IGVEAIMENVFSRLGSEWND-YKASVNMYHEVSGKDVIIAEGMYSGVY-------KDTGKSFEAEFVHVWQL  111 (134)
T ss_dssp             ESHHHHHHHTHHHHHHHEEE-EEEEEEEEEEBTTSSEEEEEEEEEEEE-------TTTCCEEEEEEEEEEEE
T ss_pred             eCHHHHHHHHHHHHHhhccc-cccchhheeeecCCCEEEEEEEEeeEE-------CCCCCEeeeeEEEEEEE
Confidence            4788887 478899999998 99999988  99999999999988885       69999999999999985

>3ec9_A Uncharacterized NTF2-like protein; structural genomics, joint center for STR genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.60A {Burkholderia thailandensis E264} SCOP: d.17.4.10

Probab=98.23  E-value=4.7e-06  Score=61.24  Aligned_cols=61  Identities=11%  Similarity=0.142  Sum_probs=55.1

Q ss_pred             CChHHHH-HHHHHHHHhCCCCceeEEEEeeeCCCEEEEEEEEEeeeeccccccCCCCCEEEEEeEEEEEC
Q 043189          114 ADEETFK-SSHDAFRSAFPRGFAWEVISVFSGPPVVAYKFRHWGYFEGPFQGHAPTGEMVEFYGIGIMKV  182 (182)
Q Consensus       114 ~~~e~f~-~s~~~f~~AFPdGf~wEVleV~s~pp~VafrwrhwGt~~G~F~G~~pTGk~Vei~Gi~i~rV  182 (182)
                      .|++.+. ..+..+..+||+ +.+++.+++++++.|++.|+..|++       +|||+.+++.++.++||
T Consensus        56 ~G~~~i~~~~~~~~~~~~~~-~~~~~~~~~~~gd~v~v~~~~~~~~-------~~tG~~~~~~~~~v~~v  117 (140)
T 3ec9_A           56 RSADEIVRNVFRRLGEEWDG-YTFKLDALHDAGDTVIGVGRYSGTY-------RRTGKSFECRVAHVWRV  117 (140)
T ss_dssp             CSHHHHHHHTHHHHHHHEEE-EEEEEEEEEEETTEEEEEEEEEEEE-------TTTCCEEEEEEEEEEEE
T ss_pred             cCHHHHHHHHHHHHHhhCCc-ceeEEEEEEEcCCEEEEEEEEEEEE-------cCCCCEEEeEEEEEEEE
Confidence            4788894 678899999998 9999999999999999999999886       58999999999999885

>3fgy_A Uncharacterized NTF2-like protein; structural genomics, joint center for STR genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.59A {Burkholderia xenovorans LB400} SCOP: d.17.4.0

Probab=98.21  E-value=2.2e-06  Score=62.36  Aligned_cols=61  Identities=10%  Similarity=-0.165  Sum_probs=55.9

Q ss_pred             CChHHHHHHHHHHHHhCCCCceeEEEEeeeCCCEEEEEEEEEeeeeccccccCCCCCEEEEEeEEEEEC
Q 043189          114 ADEETFKSSHDAFRSAFPRGFAWEVISVFSGPPVVAYKFRHWGYFEGPFQGHAPTGEMVEFYGIGIMKV  182 (182)
Q Consensus       114 ~~~e~f~~s~~~f~~AFPdGf~wEVleV~s~pp~VafrwrhwGt~~G~F~G~~pTGk~Vei~Gi~i~rV  182 (182)
                      .|++.+...+..+..+||+ +.+++.+++++++.|++.|+..|++       +|||+++++.++.++||
T Consensus        49 ~G~~~i~~~~~~~~~~~~~-~~~~~~~~~~~gd~v~v~~~~~~~~-------~~~G~~~~~~~~~~~~~  109 (135)
T 3fgy_A           49 RGHAALAALLQKASEMVEI-SYPEPPEFVAQGERVLVVGFATGRV-------KSTNRTFEDDWVFAITV  109 (135)
T ss_dssp             EHHHHHHHHHHHHHHHEEE-ECSSCCEEEEETTEEEEEEEEEEEE-------TTTCCEEEEEEEEEEEE
T ss_pred             eCHHHHHHHHHHHHHhhCc-ceeeeEEEEEcCCEEEEEEEEeEEE-------cCCCCEecccEEEEEEE
Confidence            4778999999999999998 8999999999999999999998885       79999999999999885

>3g8z_A Protein of unknown function with cystatin-like FO; NP_639274.1, snoal-like polyketide cyclase; HET: MSE; 1.90A {Xanthomonas campestris PV}

Probab=98.15  E-value=1.1e-05  Score=60.97  Aligned_cols=60  Identities=12%  Similarity=0.117  Sum_probs=53.6

Q ss_pred             CChHHHHHHHHHHHHhCCCCceeEE-EEeeeCCCEEEEEEEEEeeeeccccccCCCCCEEEEEeEEEEEC
Q 043189          114 ADEETFKSSHDAFRSAFPRGFAWEV-ISVFSGPPVVAYKFRHWGYFEGPFQGHAPTGEMVEFYGIGIMKV  182 (182)
Q Consensus       114 ~~~e~f~~s~~~f~~AFPdGf~wEV-leV~s~pp~VafrwrhwGt~~G~F~G~~pTGk~Vei~Gi~i~rV  182 (182)
                      .|++.+.+....+..+||+.|.++. .+++++|+.|+++|+..|+         ++|+.+++.|+.++||
T Consensus        64 ~G~~~v~~~~~~~~~~~~~~~~~~~i~~~~~~gd~v~v~~~~~~~---------~~G~~~~~~~~~v~~~  124 (148)
T 3g8z_A           64 RGMAVVGPMLGKMMEVSNGTFAISRADDYMASGDWVAITLEFSGQ---------ANGVTLKQAGVDLLRI  124 (148)
T ss_dssp             ESHHHHHHHHHHHHHHTTTCCEEEEEEEEEEETTEEEEEEEEEEE---------ETTEEEEEEEEEEEEE
T ss_pred             cCHHHHHHHHHHHHHhcCCceEEEecceEEecCCEEEEEEEEEEE---------eCCcEEEeeEEEEEEE
Confidence            4789999999999999995588885 8999999999999998886         6999999999999985

>3ff2_A Uncharacterized cystatin fold protein (YP_497570. NTF2 superfamily; structural genomics; 1.90A {Novosphingobium aromaticivorans dsm 12ORGANISM_TAXID}

Probab=98.13  E-value=6.7e-06  Score=59.12  Aligned_cols=61  Identities=15%  Similarity=0.057  Sum_probs=51.6

Q ss_pred             CCChHHHHHHHHHHHHhCCCCceeEEEEeeeCCCEEEEEEEEEeeeeccccccCC-CCCE--EEEEeEEEEEC
Q 043189          113 RADEETFKSSHDAFRSAFPRGFAWEVISVFSGPPVVAYKFRHWGYFEGPFQGHAP-TGEM--VEFYGIGIMKV  182 (182)
Q Consensus       113 ~~~~e~f~~s~~~f~~AFPdGf~wEVleV~s~pp~VafrwrhwGt~~G~F~G~~p-TGk~--Vei~Gi~i~rV  182 (182)
                      ..|+++|.+.+..+..+||+ +.++++.++++||.|+++++..|+        |+ +|+.  +.+.+++|+||
T Consensus        42 ~~G~~~~~~~~~~~~~~~p~-~~~~i~~~~~~Gd~V~~~~~~~~~--------~~~~G~~~~~~~~~~~ifr~  105 (117)
T 3ff2_A           42 REGKEGTRSGLAAAFARWPQ-NHAEIKDAQQVGTYVLMREHVTRG--------PATDGSPLVEPFDVVAVYSF  105 (117)
T ss_dssp             ECHHHHHHHHHHHHHHHCTT-CEEEEEEEEEETTEEEEEEEEECC--------SCSSSCCCCCCEEEEEEEEE
T ss_pred             ccCHHHHHHHHHHHHhhCCC-ceEEEEEEEEECCEEEEEEEEEec--------CCCCCCcccccEEEEEEEEE
Confidence            45789999999999999999 999999999999999999987775        33 3542  67888888875

>3dm8_A Uncharacterized protein RPA4348; siras, putative isomerase, structural genomics, PSI-2, prote structure initiative; HET: CE9; 1.80A {Rhodopseudomonas palustris} SCOP: d.17.4.20

Probab=97.97  E-value=3.7e-05  Score=57.60  Aligned_cols=108  Identities=12%  Similarity=0.049  Sum_probs=77.8

Q ss_pred             CCHHHHHHHhHheeeeeccccCCcccceeeccceeEEEECCCccCchhhhhhcCccccccccCCCCccccCCCChHHHHH
Q 043189           42 GSIEETVQNAVKSWEMELSHKTSLNDFKTINPEKFKLIVNGRKDLSGEETLQLGSYNALLKNSLPKEFQYYRADEETFKS  121 (182)
Q Consensus        42 gSLe~~VqnlvktwemE~shK~~~~dw~si~~~~f~~s~Ngg~~~~~~~~~~~G~Yn~~l~~~lp~~~~~Y~~~~e~f~~  121 (182)
                      -|++++|+.+..     +.-+-|++.+.++-.+.+.+...|...     +         +  |..+.    -.|++.+.+
T Consensus         4 ~~~~~~v~~~~~-----a~~~gD~~~l~~l~a~Dv~~~~~g~~~-----~---------~--p~~g~----~~G~~av~~   58 (143)
T 3dm8_A            4 HSLWRFSRALHR-----ALNDRQTEELATIIDDNIDWAIYGPID-----M---------F--PFFGA----RQGKAAVLE   58 (143)
T ss_dssp             CHHHHHHHHHHH-----HHHHCCCHHHHHHEEEEEEEEEESCTT-----T---------C--TTCEE----EESHHHHHH
T ss_pred             chHHHHHHHHHH-----HHHCCCHHHHHHhcCCCeEEEecCCCC-----c---------C--CCCcc----ccCHHHHHH
Confidence            366777777764     334566666666666666655533210     0         0  00011    247889999


Q ss_pred             HHHHHHHhCCCCceeEEEEeeeCCCEEEEEEEEEeeeeccccccCCCCCEEEEEeEEEEEC
Q 043189          122 SHDAFRSAFPRGFAWEVISVFSGPPVVAYKFRHWGYFEGPFQGHAPTGEMVEFYGIGIMKV  182 (182)
Q Consensus       122 s~~~f~~AFPdGf~wEVleV~s~pp~VafrwrhwGt~~G~F~G~~pTGk~Vei~Gi~i~rV  182 (182)
                      ....+..+||+ +.+++.++++++++|+..++..|+       .++||+++++.++.+++|
T Consensus        59 ~~~~~~~~~~~-~~~~~~~~~~~gd~v~v~~~~~~~-------~~~tG~~~~~~~~~~~~v  111 (143)
T 3dm8_A           59 VCRQIADSVRI-YRYHRESVMLGIDSAASMVRYSLT-------AAGTNRPISVRMALFTQF  111 (143)
T ss_dssp             HHHHHHHHEEE-EEEEEEEEEECSSEEEEEEEEEEE-------ETTTCCEEEEEEEEEEEE
T ss_pred             HHHHHHHhcCc-ceEEEEEEEEcCCeEEEEEEEEEE-------EeCCCCEEEEEEEEEEEE
Confidence            99999999998 999999999999999988776654       589999999999999875

>3rga_A Epoxide hydrolase; NTF2-like, epoxide-opening cyclic ether formation, isomerase; HET: LSB ILD; 1.59A {Streptomyces lasaliensis}

Probab=97.79  E-value=7e-05  Score=63.35  Aligned_cols=66  Identities=9%  Similarity=0.008  Sum_probs=55.7

Q ss_pred             CChHHHHHHHHHHHHhCCCCceeEEEEee--eCCCEEEEEEEEEee--eeccc------cccC----CCCCEEEEEeEEE
Q 043189          114 ADEETFKSSHDAFRSAFPRGFAWEVISVF--SGPPVVAYKFRHWGY--FEGPF------QGHA----PTGEMVEFYGIGI  179 (182)
Q Consensus       114 ~~~e~f~~s~~~f~~AFPdGf~wEVleV~--s~pp~VafrwrhwGt--~~G~F------~G~~----pTGk~Vei~Gi~i  179 (182)
                      .|++.+...+..+..+  + -...+.+++  ++|+.++++|+..|+  |+|+|      +|+|    |+|++|++.|+++
T Consensus       179 ~G~~ai~~~~~~~~~~--~-~~~~~~~~~~~~~g~~aa~~~~~~~~y~~~g~~~~~~g~~~~~~p~~~~G~~~~~~g~~~  255 (283)
T 3rga_A          179 TGLEALRAHATMAVGS--N-VRETAGLTVAGQDGRHAAVTVSATMDYLPSGPLLARHHLMTLPAPADPHRALIGIEYVMV  255 (283)
T ss_dssp             ESHHHHHHHHHHHHHT--T-CEEEEEEEEECTTSSEEEEEEEEEEESTTHHHHHHHTTSCCSCCCSCTTTCEEEEEEEEE
T ss_pred             cCHHHHHHHHHHhhcc--C-cEEEEeeEEecCCCCEEEEEEEEEEEeecccccccccccccccCCcCCCCceEEEEEEEE
Confidence            5788888888877776  3 566667766  679999999999999  88888      7888    9999999999999


Q ss_pred             EEC
Q 043189          180 MKV  182 (182)
Q Consensus       180 ~rV  182 (182)
                      +||
T Consensus       256 ~~~  258 (283)
T 3rga_A          256 IGV  258 (283)
T ss_dssp             EEE
T ss_pred             EEE
Confidence            985

>3f14_A Uncharacterized NTF2-like protein; YP_680363.1, NTF2-like protein of unknown function, structur genomics; HET: MSE TRS PGE; 1.45A {Cytophaga hutchinsonii atcc 33406}

Probab=97.79  E-value=0.00015  Score=52.24  Aligned_cols=60  Identities=5%  Similarity=-0.070  Sum_probs=53.1

Q ss_pred             CChHHHHHHHHHHHHhCCCCceeEEEEeeeCCCEEEEEEEEEeeeeccccccCCCCCEEEEEeEEEEEC
Q 043189          114 ADEETFKSSHDAFRSAFPRGFAWEVISVFSGPPVVAYKFRHWGYFEGPFQGHAPTGEMVEFYGIGIMKV  182 (182)
Q Consensus       114 ~~~e~f~~s~~~f~~AFPdGf~wEVleV~s~pp~VafrwrhwGt~~G~F~G~~pTGk~Vei~Gi~i~rV  182 (182)
                      .|++.|.+....+.+.+|+ ..+++..++++|+.|+..++..|        ..++|+.+++..+.|+||
T Consensus        40 ~G~~~~~~~~~~~~~~~~~-~~~~i~~~i~~Gd~Vvv~~~~~~--------~~~~g~~~~~~~~~vf~~   99 (112)
T 3f14_A           40 KGKADVIDFCNKMLPEMKG-AVLTNDNVIQNENQIVIEGKCRY--------FDAEGKEAFVSYCDIYRF   99 (112)
T ss_dssp             ESHHHHHHHHHHHHHHHHT-SEEEEEEEEECSSEEEEEEEEEE--------ECTTSCEEEEEEEEEEEE
T ss_pred             ecHHHHHHHHHHHHhhcCC-cEEEEEEEEEeCCEEEEEEEEEE--------EeCCCCEEEEEEEEEEEE
Confidence            3678999999999999997 99999999999999999987654        468999999999999885

>1nww_A Limonene-1,2-epoxide hydrolase; HET: MES; 1.20A {Rhodococcus erythropolis} SCOP: d.17.4.8 PDB: 1nu3_A*

Probab=97.74  E-value=0.00019  Score=52.98  Aligned_cols=60  Identities=13%  Similarity=0.130  Sum_probs=53.2

Q ss_pred             CChHHHHHHHHHHHHhCCCCc-eeEEEEeeeCCCEEEEEEEEEeeeeccccccCCCCCEEEEEeEEEEEC
Q 043189          114 ADEETFKSSHDAFRSAFPRGF-AWEVISVFSGPPVVAYKFRHWGYFEGPFQGHAPTGEMVEFYGIGIMKV  182 (182)
Q Consensus       114 ~~~e~f~~s~~~f~~AFPdGf-~wEVleV~s~pp~VafrwrhwGt~~G~F~G~~pTGk~Vei~Gi~i~rV  182 (182)
                      .|++.+.+....+..+||  + .+++.+++++|+.|+..|+..|++       +|+|+.+++.++.+++|
T Consensus        62 ~G~~~i~~~~~~~~~~~~--~~~~~~~~~~~~gd~v~~~~~~~~~~-------~~~G~~~~~~~~~~~~~  122 (149)
T 1nww_A           62 YGRDAVEQTLAGLFTVMS--IDAVETFHIGSSNGLVYTERVDVLRA-------LPTGKSYNLSILGVFQL  122 (149)
T ss_dssp             ESHHHHHHHHHHHHHHEE--EEEEEEEEEEEETTEEEEEEEEEEEE-------TTTCCEEEEEEEEEEEE
T ss_pred             cCHHHHHHHHHHHHhhCC--cceEEEEEEEecCCEEEEEEEEEEEE-------cCCCCEEEEeeEEEEEE
Confidence            378899999999999998  7 899999999999999988877764       68999999999999875

>2k54_A Protein ATU0742; protein of unknown function, structural genomics, PSI-2, Pro structure initiative; NMR {Agrobacterium tumefaciens str} SCOP: d.17.4.29

Probab=97.69  E-value=0.00012  Score=52.71  Aligned_cols=58  Identities=17%  Similarity=0.053  Sum_probs=48.7

Q ss_pred             CChHHHHHHHHHHHHhCCCCceeEEEEeeeCCCEEEEEEEEEeeeeccccccCCCCCEEEEEeEEEEEC
Q 043189          114 ADEETFKSSHDAFRSAFPRGFAWEVISVFSGPPVVAYKFRHWGYFEGPFQGHAPTGEMVEFYGIGIMKV  182 (182)
Q Consensus       114 ~~~e~f~~s~~~f~~AFPdGf~wEVleV~s~pp~VafrwrhwGt~~G~F~G~~pTGk~Vei~Gi~i~rV  182 (182)
                      .|++.+.+....+..+ |+ +.+++++++++|++|+.+|+.+|+        +|+|+. ++.++.|+||
T Consensus        44 ~G~~ai~~~~~~~~~~-~~-~~~~~~~~~~~gd~v~~~~~~~g~--------~~~~~~-~~~~~~vf~v  101 (123)
T 2k54_A           44 GNAAEIRVRHIERFKE-PD-LYGELLTRVIVGNVVIDHETVTRN--------FPEGKG-EVDVACIYEV  101 (123)
T ss_dssp             ESHHHHHHHHHHHTTC-TT-CEEEEEEEEEETTEEEEEEEEECC--------BTTBCC-EEEEEEEEEE
T ss_pred             CCHHHHHHHHHHHcCC-CC-cEEEEEEEEEECCEEEEEEEEEeE--------CCCCce-EEEEEEEEEE
Confidence            4788999999887777 98 999999999999999999998765        355554 8888888875

>1s5a_A Hypothetical protein YESE; structural genomics, PSI, protein STRU initiative, midwest center for structural genomics, MCSG, U function; 1.70A {Bacillus subtilis} SCOP: d.17.4.10

Probab=97.66  E-value=5.3e-05  Score=55.54  Aligned_cols=61  Identities=10%  Similarity=0.048  Sum_probs=53.4

Q ss_pred             CChHHHHHHHHHHHHhCCCCcee--EEEEeeeCCCEEEEEEEEEeeeeccccccCCCCCEEEEEeEEEEEC
Q 043189          114 ADEETFKSSHDAFRSAFPRGFAW--EVISVFSGPPVVAYKFRHWGYFEGPFQGHAPTGEMVEFYGIGIMKV  182 (182)
Q Consensus       114 ~~~e~f~~s~~~f~~AFPdGf~w--EVleV~s~pp~VafrwrhwGt~~G~F~G~~pTGk~Vei~Gi~i~rV  182 (182)
                      .|++.+...+..+..+||+ +.+  +++.++++|+.|++.|+..|+       ++|+|+++++.++.+++|
T Consensus        55 ~G~~~i~~~~~~~~~~~~~-~~~~~~~~~~~~~gd~v~~~~~~~~~-------~~~~G~~~~~~~~~~~~~  117 (150)
T 1s5a_A           55 EGKAAIYDYIKDYPKQIHL-SSFTAPTVYRSADSNTVIAEFQCDGH-------VIETGLPYRQSYISVIET  117 (150)
T ss_dssp             ESHHHHHHHHTTHHHHEEE-EEECCCEEEEBSSSSEEEEEEEEEEE-------ETTTCCBCCCEEEEEEEE
T ss_pred             cCHHHHHHHHHHhhhcCCc-ccceeEEEEEecCCCEEEEEEEEEEE-------EcCCCCEEEEEEEEEEEE
Confidence            4788899999989999998 777  777888999999999999887       578999999999998875

>1oh0_A Steroid delta-isomerase; ketosteroid isomerase, KSI, equilenin, PI, LBHB; HET: EQU; 1.1A {Pseudomonas putida} SCOP: d.17.4.3 PDB: 1e3v_A* 1opy_A 1dmq_A 1dmm_A 1ea2_A 3cpo_A 1e3r_A* 1ogx_A 2inx_A 2pzv_A 1c7h_A 1dmn_A 1k41_A 1oho_A* 3fzw_A* 1cqs_A* 1w00_A 1e97_A 1w6y_A* 3ipt_A* ...

Probab=97.54  E-value=0.00013  Score=52.13  Aligned_cols=59  Identities=15%  Similarity=-0.071  Sum_probs=51.9

Q ss_pred             CChHHHHHHHHHHHHhCCCCceeEEEEeeeCCCEE-EEEEEEEeeeeccccccCCCCCEEEEEeEEEEEC
Q 043189          114 ADEETFKSSHDAFRSAFPRGFAWEVISVFSGPPVV-AYKFRHWGYFEGPFQGHAPTGEMVEFYGIGIMKV  182 (182)
Q Consensus       114 ~~~e~f~~s~~~f~~AFPdGf~wEVleV~s~pp~V-afrwrhwGt~~G~F~G~~pTGk~Vei~Gi~i~rV  182 (182)
                      .|++.+.+....+..+||+ +.+++.+++..|+.+ ++.|+..|+         ++|+++.+.|+.+++|
T Consensus        48 ~G~~~i~~~~~~~~~~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~---------~~G~~~~~~~~~~~~~  107 (131)
T 1oh0_A           48 HGREQIAAFYRQGLGGGKV-RACLTGPVRASHNGCGAMPFRVEMV---------WNGQPCALDVIDVMRF  107 (131)
T ss_dssp             EHHHHHHHHHHHHHSSSCC-EEEESSCCEECSSSEEEEEEEEEEE---------SSSSEEEEEEEEEEEE
T ss_pred             ccHHHHHHHHHHHhhccce-eEeecceEEECCCeEEEEEEEEEEE---------eCCcEEEEEEEEEEEE
Confidence            4678899999999999998 999999999999999 999987663         4899999999999875

>2a15_A Hypothetical protein RV0760C; beta-alpha-barrel, structural genomics, PSI, protein structure initiative; 1.68A {Mycobacterium tuberculosis} SCOP: d.17.4.3 PDB: 2z76_A* 2z77_A* 2z7a_A

Probab=97.35  E-value=0.0012  Score=48.03  Aligned_cols=59  Identities=20%  Similarity=0.142  Sum_probs=49.5

Q ss_pred             CChHHHHHHHHHHHHhCCCCceeEEEE--eeeCCCEEEEEEEEEeeeeccccccCCCCCEEEEEeEEEEEC
Q 043189          114 ADEETFKSSHDAFRSAFPRGFAWEVIS--VFSGPPVVAYKFRHWGYFEGPFQGHAPTGEMVEFYGIGIMKV  182 (182)
Q Consensus       114 ~~~e~f~~s~~~f~~AFPdGf~wEVle--V~s~pp~VafrwrhwGt~~G~F~G~~pTGk~Vei~Gi~i~rV  182 (182)
                      .|++.+......+..+| + +.+++.+  +...|+.|++.|+..+++        |+|+++.+.|+.++||
T Consensus        55 ~G~~ai~~~~~~~~~~~-~-~~~~~~~~~i~~~g~~~~~~~~~~~~~--------~~G~~~~~~~~~~~~~  115 (139)
T 2a15_A           55 KGKEAVGAFFDTHIAAN-R-LTVTCEETFPSSSPDEIAHILVLHSEF--------DGGFTSEVRGVFTYRV  115 (139)
T ss_dssp             ESHHHHHHHHHHHTTTT-T-CEEEEEEEEECSSTTEEEEEEEEEEEE--------TTTEEEEEEEEEEEEE
T ss_pred             ecHHHHHHHHHHhcccc-e-eEEeccCceEeecCCEEEEEEEEEEEe--------CCCCEEEEEEEEEEEE
Confidence            57889999999888888 6 8998874  338999999999977653        7999999999999875

>1ohp_A Steroid delta-isomerase; inhibitor; HET: ESR; 1.53A {Pseudomonas testosteroni} SCOP: d.17.4.3 PDB: 1qjg_A* 8cho_A* 1ohs_A* 1ocv_A 1isk_A 3nuv_A* 1ogz_A* 3nhx_A* 3m8c_A* 3nxj_A* 3myt_A* 3mki_A 3mhe_A 1buq_A* 3nbr_A* 3t8u_A 3ov4_A* 3nm2_A

Probab=97.28  E-value=0.00043  Score=48.07  Aligned_cols=57  Identities=11%  Similarity=-0.026  Sum_probs=47.5

Q ss_pred             CChHHHHHHHHHHHHhCCCCceeEEE-EeeeCCCEEEEEEEEEeeeeccccccCCCCCEEEEEeEEEEEC
Q 043189          114 ADEETFKSSHDAFRSAFPRGFAWEVI-SVFSGPPVVAYKFRHWGYFEGPFQGHAPTGEMVEFYGIGIMKV  182 (182)
Q Consensus       114 ~~~e~f~~s~~~f~~AFPdGf~wEVl-eV~s~pp~VafrwrhwGt~~G~F~G~~pTGk~Vei~Gi~i~rV  182 (182)
                      .|++.+......+..+||+   +++. +++.+|+.|++.|+..|++         +|+.+.+.++.+++|
T Consensus        46 ~G~~~i~~~~~~~~~~~~~---~~~~~~~~~~g~~~~~~~~~~~~~---------~g~~~~~~~~~~~~~  103 (125)
T 1ohp_A           46 SGTAAIREFYANSLKLPLA---VELTQEVRAVANEAAFAFIVSFEY---------QGRKTVVAPIDHFRF  103 (125)
T ss_dssp             ESHHHHHHHHHHHTSSCCE---EEECSCCEEETTEEEEEEEEEEEE---------TTEEEEECCEEEEEE
T ss_pred             cCHHHHHHHHHHhcccCce---EEEeeeEEEeCCEEEEEEEEEEEe---------cCceEEEEEEEEEEE
Confidence            4778888888888888884   6688 9999999999999988865         678888888888774

>1tuh_A BAL32A, hypothetical protein EGC068; unknown function; 1.85A {Uncultured bacterium} SCOP: d.17.4.11

Probab=97.22  E-value=0.0022  Score=47.97  Aligned_cols=101  Identities=12%  Similarity=0.145  Sum_probs=69.3

Q ss_pred             HHHHHHHhHheeeeeccccCCcccceeeccceeEEEECCCccCchhhhhhcCccccccccCCCCccccCCCChHHHHHHH
Q 043189           44 IEETVQNAVKSWEMELSHKTSLNDFKTINPEKFKLIVNGRKDLSGEETLQLGSYNALLKNSLPKEFQYYRADEETFKSSH  123 (182)
Q Consensus        44 Le~~VqnlvktwemE~shK~~~~dw~si~~~~f~~s~Ngg~~~~~~~~~~~G~Yn~~l~~~lp~~~~~Y~~~~e~f~~s~  123 (182)
                      ..++|+.++..|     -.-|++.+.++-.+.+.+..-++.+..                   +.    -.|++.+.+.+
T Consensus        31 ~~~~v~~~~~a~-----~~gD~~~l~~l~a~D~~~~~~~~~~~~-------------------g~----~~G~~~i~~~~   82 (156)
T 1tuh_A           31 NAETVRRGYAAF-----NSGDMKTLTELFDENASWHTPGRSRIA-------------------GD----HKGREAIFAQF   82 (156)
T ss_dssp             HHHHHHHHHHHH-----HHTCHHHHHHHEEEEEEEEECSSSTTC-------------------EE----EESHHHHHHHH
T ss_pred             HHHHHHHHHHHH-----hCCCHHHHHHhcCCCEEEEccCCCCcc-------------------ce----EcCHHHHHHHH
Confidence            345666666544     344666665555555555444332210                   00    23778888888


Q ss_pred             HHHHHhCCC-CceeEEEEeeeCCC-EEEEEEEEEeeeeccccccCCCCCEEEEEeEEEEEC
Q 043189          124 DAFRSAFPR-GFAWEVISVFSGPP-VVAYKFRHWGYFEGPFQGHAPTGEMVEFYGIGIMKV  182 (182)
Q Consensus       124 ~~f~~AFPd-Gf~wEVleV~s~pp-~VafrwrhwGt~~G~F~G~~pTGk~Vei~Gi~i~rV  182 (182)
                      ..+ .++|+ ++.+++.+++++++ .|+..|+. |++.        +|+.+++.++.+++|
T Consensus        83 ~~~-~~~~~~~~~~~i~~~~~~gd~~v~~~~~~-~~~~--------~G~~~~~~~~~~~~~  133 (156)
T 1tuh_A           83 GRY-GGETGGTFKAVLLHVLKSDDGRVIGIHRN-TAER--------GGKRLDVGCCIVFEF  133 (156)
T ss_dssp             HHH-HHTTTTCCEEEEEEEEECTTSCEEEEEEE-EEEE--------TTEEEEEEEEEEEEE
T ss_pred             HHH-HhhcCCceEEEEEEEEEcCCCEEEEEEEE-EEec--------CCcEEeeeeEEEEEE
Confidence            886 56663 39999999999999 99999998 7763        599999999999875

>3jum_A Phenazine biosynthesis protein A/B; chirality, drug design, medicinal CH inhibitor, biosynthetic protein; HET: AOD; 1.45A {Burkholderia SP} PDB: 3b4o_A* 3b4p_A* 3dzl_A* 3ex9_A 3cnm_A* 3jun_A* 3juo_A* 3jup_A* 3juq_A*

Probab=97.21  E-value=0.0019  Score=52.67  Aligned_cols=62  Identities=16%  Similarity=0.142  Sum_probs=55.3

Q ss_pred             CCChHHHHHHHHHHHHhCCCCceeEEEEee--eCCCEEEEEEEEEeeeeccccccCCCCCE---EEEEeEEEEEC
Q 043189          113 RADEETFKSSHDAFRSAFPRGFAWEVISVF--SGPPVVAYKFRHWGYFEGPFQGHAPTGEM---VEFYGIGIMKV  182 (182)
Q Consensus       113 ~~~~e~f~~s~~~f~~AFPdGf~wEVleV~--s~pp~VafrwrhwGt~~G~F~G~~pTGk~---Vei~Gi~i~rV  182 (182)
                      -.|++.+...+..+..+||+ +.|..+.++  ++|+.|++.++..|+       +.+||+.   ++...+.|++|
T Consensus        84 ~~GReai~~~~~~~~~~~~d-~~~~~~~v~~taDpd~VvvE~~~~Gt-------v~~TGkp~~~Y~~~yi~V~rV  150 (185)
T 3jum_A           84 IRGREKLGEHAVWSLQCFPD-WVWTDIQIFETQDPNWFWVECRGEGA-------IVFPGYPRGQYRNHFLHSFRF  150 (185)
T ss_dssp             EESHHHHHHHHHHHHHHSTT-CEEEEEEEECCSSTTEEEEEEEEEEE-------ECCTTSCCEEEEEEEEEEEEE
T ss_pred             ccCHHHHHHHHHHHHhhCCC-CeeeEEEEEEecCCCEEEEEEEEEEE-------EcCCCCccceEEEeEEEEEEE
Confidence            45899999999999999999 999988884  589999999998877       8899998   99999999885

>3ff0_A Phenazine biosynthesis protein PHZB 2; cystatin-like fold, antibiotic biosynthesis, virulence, STRU genomics; 1.90A {Pseudomonas aeruginosa}

Probab=97.09  E-value=0.0036  Score=50.23  Aligned_cols=62  Identities=16%  Similarity=0.144  Sum_probs=55.0

Q ss_pred             CCChHHHHHHHHHHHHhCCCCceeEEEEee--eCCCEEEEEEEEEeeeeccccccCCCCCE---EEEEeEEEEEC
Q 043189          113 RADEETFKSSHDAFRSAFPRGFAWEVISVF--SGPPVVAYKFRHWGYFEGPFQGHAPTGEM---VEFYGIGIMKV  182 (182)
Q Consensus       113 ~~~~e~f~~s~~~f~~AFPdGf~wEVleV~--s~pp~VafrwrhwGt~~G~F~G~~pTGk~---Vei~Gi~i~rV  182 (182)
                      -.|++.+.+....+..+||+ +.|..+.++  ++|++|++.|+..|+       +.+||+.   .+...+.+++|
T Consensus        62 ~~Gre~l~~~~~~~~~~~~~-~~~~~~~i~~t~Dpd~vvvE~~~~g~-------i~~tG~~~~~y~~~yi~v~~v  128 (163)
T 3ff0_A           62 IRGKDKLAEHAVWSLKCFPD-WEWYNIKVFETDDPNHFWVECDGHGK-------ILFPGYPEGYYENHFLHSFEL  128 (163)
T ss_dssp             EESHHHHHHHHHHHHHHSTT-CEEEEEEEEEBSSTTEEEEEEEEEEE-------ECCTTSCCEEEEEEEEEEEEE
T ss_pred             eecHHHHHHHHHHHHhhCCC-ceeeeEEEEEcCCCCEEEEEEEEEEE-------EcCCCcccccEEEeEEEEEEE
Confidence            45899999999999999999 999987776  678899999999888       5889999   99999999875

>1z1s_A Hypothetical protein PA3332; beta barrel, conserved hypothetical protein, structural genomics, PSI, protein structure initiative; HET: PGE; 1.49A {Pseudomonas aeruginosa PAO1} SCOP: d.17.4.10

Probab=96.98  E-value=0.00055  Score=52.18  Aligned_cols=60  Identities=13%  Similarity=0.118  Sum_probs=48.6

Q ss_pred             CChHHHHHHHHHHHHhCCCCceeEE--EEeeeCCCEEEEEEEEEeeeeccccccCCCCCEEEEEeEEEEEC
Q 043189          114 ADEETFKSSHDAFRSAFPRGFAWEV--ISVFSGPPVVAYKFRHWGYFEGPFQGHAPTGEMVEFYGIGIMKV  182 (182)
Q Consensus       114 ~~~e~f~~s~~~f~~AFPdGf~wEV--leV~s~pp~VafrwrhwGt~~G~F~G~~pTGk~Vei~Gi~i~rV  182 (182)
                      .|++.+.+....+..+||+ . ++.  ..+.++++.|+..|+..|++       ++||+.+++.|+.++||
T Consensus        68 ~G~~ai~~~~~~~~~~~~~-~-~~~~~~~~~~~g~~vv~~~~~~g~~-------~~tG~~~~~~~~~v~~v  129 (163)
T 1z1s_A           68 EGRETIWAHMRLFPEHLTV-R-FTDVQFYETADPDLAIGEFHGDGVA-------TVSGGKLAQDYISVLRT  129 (163)
T ss_dssp             ESHHHHHHTTTTGGGTEEE-E-ECCCEEECCSSTTEEEEEEEEEEEE-------TTTCCEEEEEEEEEEEE
T ss_pred             CCHHHHHHHHHHHHHhCcc-c-eeeeEEEEEeCCCEEEEEEEEEEEE-------eCCCCEEccceEEEEEe
Confidence            4778888888888888887 5 321  23448999999999999884       78999999999999885

>3g16_A Uncharacterized protein with cystatin-like fold; YP_001022489.1, protein of unknown function with cystatin-LI structural genomics; HET: MSE; 1.45A {Methylibium petroleiphilum PM1}

Probab=96.96  E-value=0.0024  Score=50.63  Aligned_cols=55  Identities=7%  Similarity=0.123  Sum_probs=46.7

Q ss_pred             CChHHHHHHHHHHHHhCCCCceeEEEEeeeC--CCEEEEEEEEEeeeeccccccCCCCCEEEEEeEEEEE
Q 043189          114 ADEETFKSSHDAFRSAFPRGFAWEVISVFSG--PPVVAYKFRHWGYFEGPFQGHAPTGEMVEFYGIGIMK  181 (182)
Q Consensus       114 ~~~e~f~~s~~~f~~AFPdGf~wEVleV~s~--pp~VafrwrhwGt~~G~F~G~~pTGk~Vei~Gi~i~r  181 (182)
                      .|++.+...+..+..+| + ..|++..++..  +++++..|+++||..|           +++.|+.+++
T Consensus        53 ~Greai~~~f~~~~~~~-d-~~~~~e~i~v~~dG~~av~Ewt~~~T~~g-----------~~~~~~~~f~  109 (156)
T 3g16_A           53 RGAAQIAHRWRTAVETL-G-SYWTIDALVIDAETAEAAIEWTHFKTNQD-----------KVLRGAECVE  109 (156)
T ss_dssp             ESHHHHHHHHHHHHHHH-C-EEEEEEEEEEETTTTEEEEEEEEEEGGGT-----------EEEEEEEEEE
T ss_pred             cCHHHHHHHHHHHHhhc-C-ceEEEEEEEEecCCCEEEEEEEEEEeCCC-----------eeEecceEEE
Confidence            48999999999999998 5 89999999998  9999999999999776           5566666643

>3h3h_A Uncharacterized snoal-like protein; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE UNL MES; 1.60A {Burkholderia thailandensis E264}

Probab=96.76  E-value=0.0035  Score=45.13  Aligned_cols=39  Identities=21%  Similarity=0.317  Sum_probs=36.1

Q ss_pred             CChHHHHHHHHHHHHhCCCCceeEEEEeeeCCCEEEEEEE
Q 043189          114 ADEETFKSSHDAFRSAFPRGFAWEVISVFSGPPVVAYKFR  153 (182)
Q Consensus       114 ~~~e~f~~s~~~f~~AFPdGf~wEVleV~s~pp~Vafrwr  153 (182)
                      .|++.+......+..+||+ +.+++++++++++.+++.|+
T Consensus        56 ~G~~ai~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~   94 (122)
T 3h3h_A           56 RGKEQVGAYWREALRMIPD-LHFEWIATLAGVDSVAIHYR   94 (122)
T ss_dssp             EHHHHHHHHHHHHHHHCTT-CCCEEEEEEECSSEEEEEEE
T ss_pred             EcHHHHHHHHHHHHHHCCC-cEEEEEEEEecCcEEEEEEE
Confidence            4788999999999999999 99999999999999999887

>3dxo_A Uncharacterized snoal-like protein; putative isomerase of the snoal-like family; HET: MSE PGE; 2.70A {Agrobacterium tumefaciens str} SCOP: d.17.4.19

Probab=96.73  E-value=0.0082  Score=43.80  Aligned_cols=58  Identities=14%  Similarity=0.246  Sum_probs=49.6

Q ss_pred             CCChHHHHHHHHHHHHhCCCCceeEEE-EeeeCCCEEEEEEEEEeeeeccccccCCCCCEEEEEeEEEEEC
Q 043189          113 RADEETFKSSHDAFRSAFPRGFAWEVI-SVFSGPPVVAYKFRHWGYFEGPFQGHAPTGEMVEFYGIGIMKV  182 (182)
Q Consensus       113 ~~~~e~f~~s~~~f~~AFPdGf~wEVl-eV~s~pp~VafrwrhwGt~~G~F~G~~pTGk~Vei~Gi~i~rV  182 (182)
                      -.|++.+...+..+..+||+ +.+++. ++...++.+.|+|+..          +++| .+.+.|++++++
T Consensus        45 ~~G~~ai~~~~~~~~~~~~~-~~f~~~~~~~~~~~~~~~~w~~~----------~~~g-~~~~~G~d~l~~  103 (121)
T 3dxo_A           45 GEGQQGIAAMIEAARQKFPG-YRFVLAGTPDGHGNFTRFSWRLI----------SPDG-DDVAGGTDVVSL  103 (121)
T ss_dssp             EEHHHHHHHHHHHHHHHSTT-CEEEEEEEEEEETTEEEEEEEEE----------CTTS-CEEEEEEEEEEE
T ss_pred             cCCHHHHHHHHHHHHHHCCC-cEEEEccCcceeCCEEEEEEEEe----------CCCC-CceeeEEEEEEE
Confidence            46889999999999999998 999998 8899999999999853          4556 467999999874

>3dmc_A NTF2-like protein; structural genomics, joint center for STR genomics, JCSG, protein structure initiative, PSI-2, unknow function; 1.65A {Anabaena variabilis atcc 29413} SCOP: d.17.4.10

Probab=96.62  E-value=0.018  Score=42.92  Aligned_cols=59  Identities=22%  Similarity=0.227  Sum_probs=49.2

Q ss_pred             ChHHHHHHHHHHHHhCCCCceeE-EEEeeeCCCEEEEEEEEEeeeeccccccCCCCCEEEEEeEEEEEC
Q 043189          115 DEETFKSSHDAFRSAFPRGFAWE-VISVFSGPPVVAYKFRHWGYFEGPFQGHAPTGEMVEFYGIGIMKV  182 (182)
Q Consensus       115 ~~e~f~~s~~~f~~AFPdGf~wE-VleV~s~pp~VafrwrhwGt~~G~F~G~~pTGk~Vei~Gi~i~rV  182 (182)
                      |++.+.+.+..+...|+.++..+ |..+.++|++|++.|+..|+..         |+.++...+.+++|
T Consensus        56 G~~~v~~~~~~~~~~~~~~~~~~~v~~~~~~G~~vvve~~~~g~~~---------g~~y~~~~~~~f~v  115 (134)
T 3dmc_A           56 GKERAKEFFTYVSESFHTGIQISSLDRVTSNETTVVFEFRDEGLFL---------GKPYKNRVAVSFDV  115 (134)
T ss_dssp             SHHHHHHHHHHHHHTCTTCEEEEEEEEEEECSSEEEEEEEEEEEET---------TEEEEEEEEEEEEE
T ss_pred             hHHHHHHHHHHHHHhhcCCceeEEEEEEEecCCEEEEEEEEEEEEc---------CcEeeccEEEEEEE
Confidence            78899999999999999779999 9999999999999999888873         36676666666553

>3rga_A Epoxide hydrolase; NTF2-like, epoxide-opening cyclic ether formation, isomerase; HET: LSB ILD; 1.59A {Streptomyces lasaliensis}

Probab=96.61  E-value=0.003  Score=53.32  Aligned_cols=62  Identities=10%  Similarity=-0.073  Sum_probs=52.3

Q ss_pred             CCChHHHHHHHHHHHHhCCCCceeEEEEee--eCCCEEEEEEEEEeeeeccccccCCCCCEEEEEeEEEEEC
Q 043189          113 RADEETFKSSHDAFRSAFPRGFAWEVISVF--SGPPVVAYKFRHWGYFEGPFQGHAPTGEMVEFYGIGIMKV  182 (182)
Q Consensus       113 ~~~~e~f~~s~~~f~~AFPdGf~wEVleV~--s~pp~VafrwrhwGt~~G~F~G~~pTGk~Vei~Gi~i~rV  182 (182)
                      -.|++.+...+..+...|..   .++.+++  ++|+.|+++|+..+++.     -.|+|++|++.|++++||
T Consensus        46 ~~Gr~ai~~~~~~~~~~~~~---~~~~~~~~~~~G~~v~~~~~~~~~~~-----g~~~g~~v~~~gi~v~r~  109 (283)
T 3rga_A           46 VVGRAALAARLAPALRGAVH---EEPGRPYAAHDGTSVVLPATVTVGAP-----GAPPQRRGRTRVMGVIEV  109 (283)
T ss_dssp             EESHHHHHHHHHHHHHTTCE---EEECCCBCCSSSSEEEEEEEEEECST-----TCCGGGCEEEEEEEEEEE
T ss_pred             cCcHHHHHHHHHHHHhhcCc---eEEEEEEeeeeCCEEEEEEEEEEEeC-----CCCccceEEEEEEEEEEE
Confidence            36889999988888888865   5688887  89999999999888743     378999999999999985

>2bng_A MB2760; epoxide hydrolase, limonene, hydrolase, structural proteomics in europe, spine, structural genomics; 2.5A {Mycobacterium tuberculosis} SCOP: d.17.4.8

Probab=96.55  E-value=0.0068  Score=44.89  Aligned_cols=58  Identities=10%  Similarity=0.062  Sum_probs=46.4

Q ss_pred             CChHHHHHHHHHHHHhCCCCceeEEEEeeeCCCEEEEEEEEEeeeeccccccCCCCCEEEEEeEEEEEC
Q 043189          114 ADEETFKSSHDAFRSAFPRGFAWEVISVFSGPPVVAYKFRHWGYFEGPFQGHAPTGEMVEFYGIGIMKV  182 (182)
Q Consensus       114 ~~~e~f~~s~~~f~~AFPdGf~wEVleV~s~pp~VafrwrhwGt~~G~F~G~~pTGk~Vei~Gi~i~rV  182 (182)
                      .|++.+......+..+| + +.+++.+++++|+.|+..++..+++         +|+++.+.++.+++|
T Consensus        55 ~G~~~i~~~~~~~~~~~-~-~~~~i~~~~~~g~~vv~~~~~~~~~---------~G~~~~~~~~~~~~v  112 (149)
T 2bng_A           55 RGGRRTATLLRRMQGRV-G-FEVKIHRIGADGAAVLTERTDALII---------GPLRVQFWVCGVFEV  112 (149)
T ss_dssp             ECHHHHHHHHHTTTTTC-E-EEEEEEEEEEETTEEEEEEEEEEEE---------TTEEEEEEEEEEEEE
T ss_pred             cCHHHHHHHHHHHHhhc-C-cEEEEEEEEEeCCEEEEEEEEEEEE---------CCeEEEEEEEEEEEE
Confidence            36778888887777777 5 8999999999999998877644443         488899999998875

>1tp6_A Hypothetical protein PA1314; structural genomics, alpha-beta sandwich, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa PAO1} SCOP: d.17.4.12

Probab=94.48  E-value=0.063  Score=39.90  Aligned_cols=47  Identities=11%  Similarity=0.017  Sum_probs=41.7

Q ss_pred             CChHHHHHHHHHHHHhCCCCceeEEEEeee---CCCEEEEEEEEEeeeecc
Q 043189          114 ADEETFKSSHDAFRSAFPRGFAWEVISVFS---GPPVVAYKFRHWGYFEGP  161 (182)
Q Consensus       114 ~~~e~f~~s~~~f~~AFPdGf~wEVleV~s---~pp~VafrwrhwGt~~G~  161 (182)
                      -+.+........++.+||+ |..+|.++..   +++.++.+|+-|+++.|.
T Consensus        50 ~g~~~~~~~~~~~~g~~pg-l~i~i~~l~~~~~~~d~~vv~y~~~~~~~~~   99 (128)
T 1tp6_A           50 LDKTALGELFRSKGGTRPG-LRIEIDGESLLASGVDGATLAYREIQSDAAG   99 (128)
T ss_dssp             EEHHHHHHHHHHHTTCSTT-CEEEEEEEEEEEEETTEEEEEEEEEEEETTE
T ss_pred             CCHHHHHHHHHHhhCCCCC-eEEEEEEEEEEeecCCEEEEEEEEEeccCCc
Confidence            3567788888889999996 9999999999   999999999999998776

>3lyg_A NTF2-like protein of unknown function; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE GOL; 1.61A {Colwellia psychrerythraea}

Probab=93.99  E-value=0.065  Score=41.48  Aligned_cols=43  Identities=16%  Similarity=0.252  Sum_probs=39.0

Q ss_pred             cccCCCChHHHHHHHHHHHHhCCCCceeEEEEeeeCCCEEEEE
Q 043189          109 FQYYRADEETFKSSHDAFRSAFPRGFAWEVISVFSGPPVVAYK  151 (182)
Q Consensus       109 ~~~Y~~~~e~f~~s~~~f~~AFPdGf~wEVleV~s~pp~Vafr  151 (182)
                      +.-+-.|+++|.+.+..+-.++|+||..+++-++++++.|+--
T Consensus        38 sa~vl~GR~~~r~a~~~L~~~lP~g~~It~lR~i~ggn~VVSe   80 (120)
T 3lyg_A           38 QADVLKGRQAFRSALDNLGEILPPGFEITGLRQLEGENEIVSI   80 (120)
T ss_dssp             TTCEEESHHHHHHHHTTHHHHSCTTCEEEEEEEEECSSEEEEE
T ss_pred             ccceeecHHHHHHHHHHHHhhCCCCceeeeEEEecCCCEEEEE
Confidence            3457889999999999999999999999999999999999853

>3hx8_A MLR2180 protein, putative ketosteroid isomerase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative; HET: MSE UNL PG4; 1.45A {Mesorhizobium loti}

Probab=93.30  E-value=0.81  Score=31.66  Aligned_cols=101  Identities=6%  Similarity=-0.032  Sum_probs=62.6

Q ss_pred             CHHHHHHHhHheeeeeccccCCcccceeeccceeEEEECCCccCchhhhhhcCccccccccCCCCccccCCCChHHHHHH
Q 043189           43 SIEETVQNAVKSWEMELSHKTSLNDFKTINPEKFKLIVNGRKDLSGEETLQLGSYNALLKNSLPKEFQYYRADEETFKSS  122 (182)
Q Consensus        43 SLe~~VqnlvktwemE~shK~~~~dw~si~~~~f~~s~Ngg~~~~~~~~~~~G~Yn~~l~~~lp~~~~~Y~~~~e~f~~s  122 (182)
                      +|++-|+.|+..|. ++.-.-|++.+.++=.+.-.+.-.++..                           -.|++.+.+.
T Consensus         3 ~~~~~I~~~~~~~~-~a~~~~D~~~~~~l~a~Da~~~~~~~~~---------------------------~~G~~~i~~~   54 (129)
T 3hx8_A            3 SAKEAIEAANADFV-KAYNSKDAAGVASKYMDDAAAFPPDMAR---------------------------VDGRQNIQKL   54 (129)
T ss_dssp             CHHHHHHHHHHHHH-HHHHTTCHHHHHTTEEEEEEEECTTSCC---------------------------EESHHHHHHH
T ss_pred             hHHHHHHHHHHHHH-HHHHcCCHHHHHHhhCCCeEEeCCCCCc---------------------------ccCHHHHHHH
Confidence            57777777777775 3544555555544433333221111110                           2356666666


Q ss_pred             HHHHHH-hCCCCceeEEEEeeeCCCEEEEEEEEEeeeeccccccCCCCCEEEEEeEE
Q 043189          123 HDAFRS-AFPRGFAWEVISVFSGPPVVAYKFRHWGYFEGPFQGHAPTGEMVEFYGIG  178 (182)
Q Consensus       123 ~~~f~~-AFPdGf~wEVleV~s~pp~VafrwrhwGt~~G~F~G~~pTGk~Vei~Gi~  178 (182)
                      +..+.. .+++ +.+++++|...|+.++..++..++..      .++|+.+.+.|..
T Consensus        55 ~~~~~~~~~~~-~~~~~~~v~~~gd~A~~~~~~~~~~~------~~~G~~~~~~g~~  104 (129)
T 3hx8_A           55 WQGAMDMGISE-LKLTTLDVQESGDFAFESGSFSLKAP------GKDSKLVDAAGKY  104 (129)
T ss_dssp             HHHHHHTTCEE-EEEEEEEEEEETTEEEEEEEEEEEEE------CTTSCEEEEEEEE
T ss_pred             HHHHHhCCCce-EEEEEEEEEcCCCEEEEEEEEEEEee------CCCCCeeeeeEEE
Confidence            665444 3466 88899999999999999887776642      5789988766653

>3d9r_A Ketosteroid isomerase-like protein; YP_049581.1, structural joint center for structural genomics, JCSG, protein structu initiative; HET: MSE; 2.40A {Pectobacterium atrosepticum} SCOP: d.17.4.27

Probab=92.08  E-value=1.2  Score=31.18  Aligned_cols=57  Identities=11%  Similarity=-0.005  Sum_probs=41.5

Q ss_pred             ChHHHHHHHHHHHHhCCCCceeEEEEeee-CCCEEEEEEEEEeeeeccccccCCCCCEEEEEe
Q 043189          115 DEETFKSSHDAFRSAFPRGFAWEVISVFS-GPPVVAYKFRHWGYFEGPFQGHAPTGEMVEFYG  176 (182)
Q Consensus       115 ~~e~f~~s~~~f~~AFPdGf~wEVleV~s-~pp~VafrwrhwGt~~G~F~G~~pTGk~Vei~G  176 (182)
                      |++.+.+++..+...++..+.++++++.. +|+.++.+++..++++++     .+|..+...+
T Consensus        52 G~~ai~~~~~~~~~~~~~~~~~~~~~i~~~~gd~a~~~~~~~~~~~~~-----~~g~~~~~~~  109 (135)
T 3d9r_A           52 GKDELAEVYLSVFETVGFDMAYEIKEVVQTSADWAFVRSATEGTETNK-----ATGVVTPAAY  109 (135)
T ss_dssp             SHHHHHHHHHHHHHHEEEEEEEEEEEEEEEETTEEEEEEEEEEEEEET-----TTCCEEEEEE
T ss_pred             CHHHHHHHHHHHHhhcCCceeEEEEEEEEecCCEEEEEEEEEEEEecC-----CCCCceeecc
Confidence            67888888887776665237889999877 889999999888887643     2455555433

>3en8_A Uncharacterized NTF-2 like protein; YP_553245.1, NTF-2 like protein of unknown function, structu genomics; HET: MSE PG4; 1.85A {Burkholderia xenovorans LB400} SCOP: d.17.4.20

Probab=91.27  E-value=0.97  Score=33.00  Aligned_cols=51  Identities=20%  Similarity=0.240  Sum_probs=37.6

Q ss_pred             ChHHHHHHHHHHHHhCCCCce-eEEEEeeeCCCEEEEEEEEEeeeeccccccCCCCCEEEEEeEEEEEC
Q 043189          115 DEETFKSSHDAFRSAFPRGFA-WEVISVFSGPPVVAYKFRHWGYFEGPFQGHAPTGEMVEFYGIGIMKV  182 (182)
Q Consensus       115 ~~e~f~~s~~~f~~AFPdGf~-wEVleV~s~pp~VafrwrhwGt~~G~F~G~~pTGk~Vei~Gi~i~rV  182 (182)
                      |++.|..    |...||+... ++|+.+.++|+.|++.++...           +|  +.+.++.|++|
T Consensus        47 Gr~~~~~----~~~~~~~~~~~~~i~~~~a~G~~vv~~~~~~~-----------~g--~~~~~~~v~~v   98 (128)
T 3en8_A           47 GRMNLQA----LRSHHPGKPAGFEVRRIQGEGNLWITEYSISY-----------NG--RPAYTVSIMEF   98 (128)
T ss_dssp             SHHHHHH----HHHHTTCSCSEEEEEEEEEETTEEEEEEEEEE-----------TT--EEEEEEEEEEE
T ss_pred             CHHHHHH----HHHHCCCCCcceEEEEEEECCCEEEEEEEEec-----------CC--EEEEEEEEEEE
Confidence            5666554    5678998434 899999999999999998642           23  46777777764

>3mso_A Steroid delta-isomerase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 2.57A {Pseudomonas aeruginosa}

Probab=88.55  E-value=1.8  Score=32.30  Aligned_cols=53  Identities=17%  Similarity=0.283  Sum_probs=38.1

Q ss_pred             CChHHHHHHHHHHHHhCCCCceeEEEEeee--CCCEEEEEEEEEeeeeccccccCCCCCEEEEEeEEEEEC
Q 043189          114 ADEETFKSSHDAFRSAFPRGFAWEVISVFS--GPPVVAYKFRHWGYFEGPFQGHAPTGEMVEFYGIGIMKV  182 (182)
Q Consensus       114 ~~~e~f~~s~~~f~~AFPdGf~wEVleV~s--~pp~VafrwrhwGt~~G~F~G~~pTGk~Vei~Gi~i~rV  182 (182)
                      .|++.+...+..+.+.||+ |  ++..++.  ++..++..|+..  . |        |+  ++.|+++++|
T Consensus        50 ~G~~~v~~~~~~~~~~~~~-f--~~~~~~~~~dg~~~~~~f~~~--~-~--------g~--~v~Gv~v~~~  104 (143)
T 3mso_A           50 AGAPVVSMILNTVLTVFED-F--AYHRQLASADGRSVVLEFSAR--V-G--------ER--ELKGIDMIRF  104 (143)
T ss_dssp             ESHHHHHHHHHHHHHHCEE-E--EEEEEEEETTSSEEEEEEEEE--E-T--------TE--EEEEEEEEEE
T ss_pred             cCHHHHHHHHHHHHhhCCc-e--EEEEEEEccCCCEEEEEEEEE--E-C--------CE--EEEEEEEEEE
Confidence            5889999999999999996 5  5555554  788888888743  2 1        33  6677776654

>3f8x_A Putative delta-5-3-ketosteroid isomerase; structural genomics, joint center for structural genomics; HET: MSE; 1.55A {Pectobacterium atrosepticum SCRI1043}

Probab=80.06  E-value=7.6  Score=29.50  Aligned_cols=84  Identities=13%  Similarity=0.126  Sum_probs=53.2

Q ss_pred             CCHHHHHHHhHheeeeeccccCCcccceeeccceeEEEECCCccCchhhhhhcCccccccccCCCCccccCCCChHHHHH
Q 043189           42 GSIEETVQNAVKSWEMELSHKTSLNDFKTINPEKFKLIVNGRKDLSGEETLQLGSYNALLKNSLPKEFQYYRADEETFKS  121 (182)
Q Consensus        42 gSLe~~VqnlvktwemE~shK~~~~dw~si~~~~f~~s~Ngg~~~~~~~~~~~G~Yn~~l~~~lp~~~~~Y~~~~e~f~~  121 (182)
                      ++|.+.++.+++.|- ++.-+-|++.+..+-.+...+.-                       |... .+  -.|++.+..
T Consensus        16 ~~~~~~~~~~l~~f~-~a~~~gD~~aL~~LlA~Dvv~~~-----------------------P~~~-~~--~~G~~av~~   68 (148)
T 3f8x_A           16 TSPNAAVQSGLQEWH-RIIAEADWERLPDLLAEDVVFSN-----------------------PSTF-DP--YHGKGPLMV   68 (148)
T ss_dssp             -CCCHHHHHHHHHHH-HHHHHTCGGGSGGGEEEEEEEEC-----------------------SSCS-SC--EESHHHHHH
T ss_pred             cchhHHHHHHHHHHH-HHHHcCCHHHHHHHhCCCEEEEC-----------------------CCCC-CC--cCCHHHHHH
Confidence            357777777777773 35555666666555444444332                       2111 01  248899999


Q ss_pred             HHHHHHHhCCCCceeEEEEeeeCCCEEEEEEEEE
Q 043189          122 SHDAFRSAFPRGFAWEVISVFSGPPVVAYKFRHW  155 (182)
Q Consensus       122 s~~~f~~AFPdGf~wEVleV~s~pp~Vafrwrhw  155 (182)
                      .+....+.||+ |  ++...+..++..++.|+.+
T Consensus        69 ~~~~~~~~~~~-f--~~~~~~~~g~~~~l~f~~~   99 (148)
T 3f8x_A           69 ILPAVFSVLEN-F--QYARHFSSKSGYVLEFNAN   99 (148)
T ss_dssp             HHHHHHHHCEE-E--EEEEEEECSSEEEEEEEEE
T ss_pred             HHHHHHhhCCC-E--EEEEEEEeCCeEEEEEEEE
Confidence            99998899998 6  4556666777778888854

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	182
d2f99a1	140	d.17.4.9 (A:2-141) Aklanonic acid methyl ester cyc	2e-05

>d2f99a1 d.17.4.9 (A:2-141) Aklanonic acid methyl ester cyclase, AknH {Streptomyces galilaeus [TaxId: 33899]} Length = 140

class: Alpha and beta proteins (a+b)
fold: Cystatin-like
superfamily: NTF2-like
family: SnoaL-like polyketide cyclase
domain: Aklanonic acid methyl ester cyclase, AknH
species: Streptomyces galilaeus [TaxId: 33899]

 Score = 40.2 bits (93), Expect = 2e-05
 Identities = 13/66 (19%), Positives = 22/66 (33%)

Query: 117 ETFKSSHDAFRSAFPRGFAWEVISVFSGPPVVAYKFRHWGYFEGPFQGHAPTGEMVEFYG 176
           E F  +    +  F      E + +      V  +   +G   G   G APTG +     
Sbjct: 45  ELFAINVAWVKKTFSEEARLEEVGIEERADWVRARLVLYGRHVGEMVGMAPTGRLFSGEQ 104

Query: 177 IGIMKV 182
           I ++  
Sbjct: 105 IHLLHF 110

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	182
d2f99a1	140	Aklanonic acid methyl ester cyclase, AknH {Strepto	99.52
d2geya1	144	Putative hydroxylase AclR {Streptomyces galilaeus	99.45
d2gexa1	138	Nogalamycin biosynthesis protein SnoL {Streptomyce	99.28
d1sjwa_	142	Nogalonic acid methyl ester cyclase SnoaL {Strepto	99.27
d3ec9a1	130	Uncharacterized protein BTHI0051 {Burkholderia tha	97.86
d3dm8a1	135	Uncharacterized protein Rpa4348 {Rhodopseudomonas	97.83
d3dmca1	133	Uncharacterized protein Ava2261 {Anabaena variabil	97.67
d3ebta1	131	Uncharacterized protein BPSS0132 {Burkholderia pse	97.54
d1nwwa_	145	Limonene-1,2-epoxide hydrolase {Rhodococcus erythr	97.53
d1z1sa1	129	Uncharacterized protein PA3332 {Pseudomonas aerugi	96.76
d3dxoa1	117	Uncharacterized protein Atu0744 {Agrobacterium tum	96.75
d1s5aa_	139	Hypothetical protein YesE {Bacillus subtilis [TaxI	96.54
d2k54a1	123	Uncharacterized protein Atu0742 {Agrobacterium tum	96.06
d1tuha_	131	Hypothetical protein egc068 from a soil-derived mo	95.9
d2bnga1	132	Uncharacterized protein Mb2760 {Mycobacterium tube	95.87
d2a15a1	132	Hypothetical protein Rv0760c {Mycobacterium tuberc	95.82
d1ohpa1	125	Delta-5-3-ketosteroid isomerase, steroid delta-iso	93.72
d1oh0a_	125	Delta-5-3-ketosteroid isomerase, steroid delta-iso	90.56
d3en8a1	127	Uncharacterized protein BxeB2092 {Burkholderia xen	85.27

>d2f99a1 d.17.4.9 (A:2-141) Aklanonic acid methyl ester cyclase, AknH {Streptomyces galilaeus [TaxId: 33899]}

class: Alpha and beta proteins (a+b)
fold: Cystatin-like
superfamily: NTF2-like
family: SnoaL-like polyketide cyclase
domain: Aklanonic acid methyl ester cyclase, AknH
species: Streptomyces galilaeus [TaxId: 33899]

Probab=99.52  E-value=2.9e-14  Score=106.26  Aligned_cols=69  Identities=19%  Similarity=0.248  Sum_probs=65.9

Q ss_pred             CChHHHHHHHHHHHHhCCCCceeEEEEeeeCCCEEEEEEEEEeeeeccccccCCCCCEEEEEeEEEEEC
Q 043189          114 ADEETFKSSHDAFRSAFPRGFAWEVISVFSGPPVVAYKFRHWGYFEGPFQGHAPTGEMVEFYGIGIMKV  182 (182)
Q Consensus       114 ~~~e~f~~s~~~f~~AFPdGf~wEVleV~s~pp~VafrwrhwGt~~G~F~G~~pTGk~Vei~Gi~i~rV  182 (182)
                      .|++++++....|+.+||+.+.+++..+..+++.|+++|+.+|||+|+|+|++|||++|++.|++++||
T Consensus        42 ~G~e~~~~~~~~~~~~fpd~~~~~~~~~~~~gd~V~~~~~~~gt~~g~~~g~~~tG~~v~~~~~~~~~~  110 (140)
T d2f99a1          42 RGPELFAINVAWVKKTFSEEARLEEVGIEERADWVRARLVLYGRHVGEMVGMAPTGRLFSGEQIHLLHF  110 (140)
T ss_dssp             CHHHHHHHHHHHHHHHHCTTCEEEEEEEEEETTEEEEEEEEEEECCSCBTTBCCCCCEEEEEEEEEEEE
T ss_pred             cCHHHHHHHHHHHhhcCCcceEEEEEEEecCCCEEEEEEEEEecccccccccCCCCCeEEEEEEEeeEE
Confidence            478999999999999999889999999999999999999999999999999999999999999999985

>d2geya1 d.17.4.9 (A:2-145) Putative hydroxylase AclR {Streptomyces galilaeus [TaxId: 33899]}

class: Alpha and beta proteins (a+b)
fold: Cystatin-like
superfamily: NTF2-like
family: SnoaL-like polyketide cyclase
domain: Putative hydroxylase AclR
species: Streptomyces galilaeus [TaxId: 33899]

Probab=99.45  E-value=2.1e-13  Score=101.45  Aligned_cols=67  Identities=22%  Similarity=0.314  Sum_probs=64.8

Q ss_pred             ChHHHHHHHHHHHHhCCCCceeEEEEeeeCCCEEEEEEEEEeeeeccccccCCCCCEEEEEeEEEEEC
Q 043189          115 DEETFKSSHDAFRSAFPRGFAWEVISVFSGPPVVAYKFRHWGYFEGPFQGHAPTGEMVEFYGIGIMKV  182 (182)
Q Consensus       115 ~~e~f~~s~~~f~~AFPdGf~wEVleV~s~pp~VafrwrhwGt~~G~F~G~~pTGk~Vei~Gi~i~rV  182 (182)
                      +.+++......++++||| +.+++++++++++.|+.+|+..|||+|++.|+||||++|++.|+++++|
T Consensus        42 G~~~~~~~~~~~~~~~pd-~~~~~~~~~~~g~~v~~~~~~~gt~~g~~~~~~~tGk~v~~~~~~~~~~  108 (144)
T d2geya1          42 SSADMVKLMEGGLKAFPD-LQLEVKSIMAEEDRVALRITVTATHQGEFMGVQPTGQRVSWHLVEELRF  108 (144)
T ss_dssp             CHHHHHHHHHHHHHHSTT-CEEEEEEEEEETTEEEEEEEEEEECCSCBTTBCCCCCEEEEEEEEEEEE
T ss_pred             CHHHHHHHHHHHHHhccc-ccceeeeEEeccccceeEeeeeeecccccccccCCCCceeEEEEEEEEE
Confidence            778999999999999999 9999999999999999999999999999999999999999999999875

>d2gexa1 d.17.4.9 (A:2-139) Nogalamycin biosynthesis protein SnoL {Streptomyces nogalater [TaxId: 38314]}

class: Alpha and beta proteins (a+b)
fold: Cystatin-like
superfamily: NTF2-like
family: SnoaL-like polyketide cyclase
domain: Nogalamycin biosynthesis protein SnoL
species: Streptomyces nogalater [TaxId: 38314]

Probab=99.28  E-value=1.2e-11  Score=90.63  Aligned_cols=67  Identities=22%  Similarity=0.316  Sum_probs=64.4

Q ss_pred             ChHHHHHHHHHHHHhCCCCceeEEEEeeeCCCEEEEEEEEEeeeeccccccCCCCCEEEEEeEEEEEC
Q 043189          115 DEETFKSSHDAFRSAFPRGFAWEVISVFSGPPVVAYKFRHWGYFEGPFQGHAPTGEMVEFYGIGIMKV  182 (182)
Q Consensus       115 ~~e~f~~s~~~f~~AFPdGf~wEVleV~s~pp~VafrwrhwGt~~G~F~G~~pTGk~Vei~Gi~i~rV  182 (182)
                      +.+.+......++.+||+ +.+++.+++++++.|+..|+..|++.|+++|+||||++|++.|+++++|
T Consensus        43 G~~~~~~~~~~~~~~~~d-~~~~~~~~~~~gd~v~~~~~~~~~~~g~~~~~~~tG~~v~~~~~~~~~~  109 (138)
T d2gexa1          43 SAEEVVRRMNSAVEAFPD-LRLDVRSIVGEGDRVMLRITCSATHQGVFMGIAPTGRKVRWTYLEELRF  109 (138)
T ss_dssp             CHHHHHHHHHHHHHHCTT-CEEEEEEEEEETTEEEEEEEEEEECCSCBTTBCCCCCEEEEEEEEEEEE
T ss_pred             CHHHHHHHHHHHHHhccC-ceeeeeeeeeccccceeeecccccccccccccCCcccEEEEEEEEEEEE
Confidence            778888899999999999 9999999999999999999999999999999999999999999999985

>d1sjwa_ d.17.4.9 (A:) Nogalonic acid methyl ester cyclase SnoaL {Streptomyces nogalater [TaxId: 38314]}

class: Alpha and beta proteins (a+b)
fold: Cystatin-like
superfamily: NTF2-like
family: SnoaL-like polyketide cyclase
domain: Nogalonic acid methyl ester cyclase SnoaL
species: Streptomyces nogalater [TaxId: 38314]

Probab=99.27  E-value=9.1e-12  Score=90.94  Aligned_cols=70  Identities=17%  Similarity=0.233  Sum_probs=65.3

Q ss_pred             CCChHHHHHHHHHHHHhCCCCceeEEEEeeeCCCEEEEEEEEEeeeeccccccCCCCCEEEEEeEEEEEC
Q 043189          113 RADEETFKSSHDAFRSAFPRGFAWEVISVFSGPPVVAYKFRHWGYFEGPFQGHAPTGEMVEFYGIGIMKV  182 (182)
Q Consensus       113 ~~~~e~f~~s~~~f~~AFPdGf~wEVleV~s~pp~VafrwrhwGt~~G~F~G~~pTGk~Vei~Gi~i~rV  182 (182)
                      .-+++.++.....++.+||+.+..+++.+.++++.|+++|+..|||.|+|+|+||||+++++.+++++||
T Consensus        41 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gd~v~~~~~~~gt~~g~~~~~~~tGk~~~~~~~~~~~~  110 (142)
T d1sjwa_          41 HTGPKAFAQLVGWVRATFSEEARLEEVRIEERGPWVKAYLVLYGRHVGRLVGMPPTDRRFSGEQVHLMRI  110 (142)
T ss_dssp             CSHHHHHHHHHHHHHHHHCTTCEEEEEEEEEETTEEEEEEEEEEECCSCBTTBCCCCCEEEEEEEEEEEE
T ss_pred             cchhHHHHHHHHHHHhhhcccccceEEEEEecCCEEEEEEEEEEcCcccceecCCCcceEEEEEEEEEEE
Confidence            3457899999999999999977899999999999999999999999999999999999999999999985

>d3ec9a1 d.17.4.10 (A:10-139) Uncharacterized protein BTHI0051 {Burkholderia thailandensis [TaxId: 57975]}

class: Alpha and beta proteins (a+b)
fold: Cystatin-like
superfamily: NTF2-like
family: PhzA/PhzB-like
domain: Uncharacterized protein BTHI0051
species: Burkholderia thailandensis [TaxId: 57975]

Probab=97.86  E-value=3.5e-05  Score=53.78  Aligned_cols=105  Identities=11%  Similarity=0.117  Sum_probs=83.7

Q ss_pred             CHHHHHHHhHheeeeeccccCCcccceeeccceeEEEECCCccCchhhhhhcCccccccccCCCCccccCCCChHHHHHH
Q 043189           43 SIEETVQNAVKSWEMELSHKTSLNDFKTINPEKFKLIVNGRKDLSGEETLQLGSYNALLKNSLPKEFQYYRADEETFKSS  122 (182)
Q Consensus        43 SLe~~VqnlvktwemE~shK~~~~dw~si~~~~f~~s~Ngg~~~~~~~~~~~G~Yn~~l~~~lp~~~~~Y~~~~e~f~~s  122 (182)
                      +-.++|+.+.+.|     -.-|++.+.++-.+-+.+..+|+.+..+.       +               .-.++.++..
T Consensus         3 t~~~iv~~~~~A~-----~~~D~d~~~~~~a~D~~~~~~~~~~~~~~-------~---------------~~~~~~~~~~   55 (130)
T d3ec9a1           3 TPYQIVADHYAAS-----DRHDPAAMMADIAPAIEWTEMAGFPCAGT-------Y---------------RSADEIVRNV   55 (130)
T ss_dssp             CHHHHHHHHHHHH-----HTTCHHHHHTTEEEEEEEEECTTSTTCEE-------E---------------CSHHHHHHHT
T ss_pred             CHHHHHHHHHHHH-----HCcCHHHHHHhcCcccEEEecCCceeccc-------E---------------EcchhHHhHH
Confidence            3457777777654     46788889999899999988887655421       1               1133456777


Q ss_pred             HHHHHHhCCCCceeEEEEeeeCCCEEEEEEEEEeeeeccccccCCCCCEEEEEeEEEEEC
Q 043189          123 HDAFRSAFPRGFAWEVISVFSGPPVVAYKFRHWGYFEGPFQGHAPTGEMVEFYGIGIMKV  182 (182)
Q Consensus       123 ~~~f~~AFPdGf~wEVleV~s~pp~VafrwrhwGt~~G~F~G~~pTGk~Vei~Gi~i~rV  182 (182)
                      ...+...|++ +.+++..++..++.++..|+..|++       .+||+.+++.++.+++|
T Consensus        56 ~~~~~~~~~~-~~~~~~~~~~~~d~~~~~~~~~~~~-------~~tG~~~~~~~~~~~~~  107 (130)
T d3ec9a1          56 FRRLGEEWDG-YTFKLDALHDAGDTVIGVGRYSGTY-------RRTGKSFECRVAHVWRV  107 (130)
T ss_dssp             HHHHHHHEEE-EEEEEEEEEEETTEEEEEEEEEEEE-------TTTCCEEEEEEEEEEEE
T ss_pred             hhhhhccccc-ceeeeEEEEecCCeeEEEEEEEEEE-------eCCCCEEEEEEEEEEEE
Confidence            8888999998 9999999999999999999998886       48999999999999875

>d3dm8a1 d.17.4.20 (A:1-135) Uncharacterized protein Rpa4348 {Rhodopseudomonas palustris [TaxId: 1076]}

class: Alpha and beta proteins (a+b)
fold: Cystatin-like
superfamily: NTF2-like
family: Rpa4348-like
domain: Uncharacterized protein Rpa4348
species: Rhodopseudomonas palustris [TaxId: 1076]

Probab=97.83  E-value=4.5e-05  Score=54.36  Aligned_cols=107  Identities=12%  Similarity=0.049  Sum_probs=82.4

Q ss_pred             CHHHHHHHhHheeeeeccccCCcccceeeccceeEEEECCCccCchhhhhhcCccccccccCCCCccccCCCChHHHHHH
Q 043189           43 SIEETVQNAVKSWEMELSHKTSLNDFKTINPEKFKLIVNGRKDLSGEETLQLGSYNALLKNSLPKEFQYYRADEETFKSS  122 (182)
Q Consensus        43 SLe~~VqnlvktwemE~shK~~~~dw~si~~~~f~~s~Ngg~~~~~~~~~~~G~Yn~~l~~~lp~~~~~Y~~~~e~f~~s  122 (182)
                      +|..+|+.+-+     |..--+++.+.++-.+.+.+.++|.+..                .|+.+.    ..+++++.+.
T Consensus         5 ~~~~~~~~~y~-----A~~~~d~d~~~~l~~~D~~~~~~g~~~~----------------~P~~G~----~~G~~~~~~~   59 (135)
T d3dm8a1           5 SLWRFSRALHR-----ALNDRQTEELATIIDDNIDWAIYGPIDM----------------FPFFGA----RQGKAAVLEV   59 (135)
T ss_dssp             HHHHHHHHHHH-----HHHHCCCHHHHHHEEEEEEEEEESCTTT----------------CTTCEE----EESHHHHHHH
T ss_pred             hHHHHHHHHHH-----HHhcCCHHHHHHhcCcceEEEccccccc----------------cccccc----cccchhhhhh
Confidence            35555555544     3344677778888888888887765310                022222    3478899999


Q ss_pred             HHHHHHhCCCCceeEEEEeeeCCCEEEEEEEEEeeeeccccccCCCCCEEEEEeEEEEEC
Q 043189          123 HDAFRSAFPRGFAWEVISVFSGPPVVAYKFRHWGYFEGPFQGHAPTGEMVEFYGIGIMKV  182 (182)
Q Consensus       123 ~~~f~~AFPdGf~wEVleV~s~pp~VafrwrhwGt~~G~F~G~~pTGk~Vei~Gi~i~rV  182 (182)
                      ...+...+++ +.+++..++++++.|+..|+..++       +.+||+.+++.++.+++|
T Consensus        60 ~~~~~~~~~~-~~~~~~~~~~~~d~v~v~~~~~~~-------~~~tG~~~~~~~~~~~~~  111 (135)
T d3dm8a1          60 CRQIADSVRI-YRYHRESVMLGIDSAASMVRYSLT-------AAGTNRPISVRMALFTQF  111 (135)
T ss_dssp             HHHHHHHEEE-EEEEEEEEEECSSEEEEEEEEEEE-------ETTTCCEEEEEEEEEEEE
T ss_pred             hhhccccccc-eeeeeeeEEecCceEEEEEEEeEE-------eeccceEEEEEEEEEEEE
Confidence            9999999999 999999999999999999999998       568999999999999875

>d3dmca1 d.17.4.10 (A:1-133) Uncharacterized protein Ava2261 {Anabaena variabilis [TaxId: 1172]}

class: Alpha and beta proteins (a+b)
fold: Cystatin-like
superfamily: NTF2-like
family: PhzA/PhzB-like
domain: Uncharacterized protein Ava2261
species: Anabaena variabilis [TaxId: 1172]

Probab=97.67  E-value=0.00012  Score=52.67  Aligned_cols=104  Identities=15%  Similarity=0.111  Sum_probs=81.6

Q ss_pred             HHHHHHhHheeeeeccccCCcccceeeccceeEEEECCCccCchhhhhhcCccccccccCCCCccccCCCChHHHHHHHH
Q 043189           45 EETVQNAVKSWEMELSHKTSLNDFKTINPEKFKLIVNGRKDLSGEETLQLGSYNALLKNSLPKEFQYYRADEETFKSSHD  124 (182)
Q Consensus        45 e~~VqnlvktwemE~shK~~~~dw~si~~~~f~~s~Ngg~~~~~~~~~~~G~Yn~~l~~~lp~~~~~Y~~~~e~f~~s~~  124 (182)
                      .++++.+|+.| ++|.-.-|.+.+.+.-.+-+.+...|++.               .     +.    ..+++.+.+...
T Consensus        10 ~~~a~~~~e~f-~~a~~~gD~d~~~~l~~~D~~~~~p~~~~---------------~-----g~----~~G~~~v~~~~~   64 (133)
T d3dmca1          10 LKVAHQGFEFF-TQGLATGEWQKFLDMLTEDFTFWFPMGEF---------------H-----GL----NVGKERAKEFFT   64 (133)
T ss_dssp             HHHHHHHHHHH-HHHHHHSCCHHHHTTEEEEEEEEESSGGG---------------B-----EE----EESHHHHHHHHH
T ss_pred             HHHHHHHHHHH-HHHHHcCCHHHHHHHhccceEEEecCCCc---------------c-----cc----hhhHHHHHHHhh
Confidence            45667777766 55556678888888888888888776531               1     11    126788999999


Q ss_pred             HHHHhCCCC-ceeEEEEeeeCCCEEEEEEEEEeeeeccccccCCCCCEEEEEeEEEEEC
Q 043189          125 AFRSAFPRG-FAWEVISVFSGPPVVAYKFRHWGYFEGPFQGHAPTGEMVEFYGIGIMKV  182 (182)
Q Consensus       125 ~f~~AFPdG-f~wEVleV~s~pp~VafrwrhwGt~~G~F~G~~pTGk~Vei~Gi~i~rV  182 (182)
                      .+..+||++ +..++..++++|+.|++.|+..|+.         ||+.++...+.|++|
T Consensus        65 ~~~~~~~~~~~~~~~~~~~~~g~~vvve~~~~~~~---------~G~~~~~~~~~vf~v  114 (133)
T d3dmca1          65 YVSESFHTGIQISSLDRVTSNETTVVFEFRDEGLF---------LGKPYKNRVAVSFDV  114 (133)
T ss_dssp             HHHHTCTTCEEEEEEEEEEECSSEEEEEEEEEEEE---------TTEEEEEEEEEEEEE
T ss_pred             hcccccccccceeeEEEEecCCCEEEEEEEEEEee---------cceEEeccEEEEEEE
Confidence            999999986 6889999999999999999977753         899999999888875

>d3ebta1 d.17.4.9 (A:1-131) Uncharacterized protein BPSS0132 {Burkholderia pseudomallei [TaxId: 28450]}

class: Alpha and beta proteins (a+b)
fold: Cystatin-like
superfamily: NTF2-like
family: SnoaL-like polyketide cyclase
domain: Uncharacterized protein BPSS0132
species: Burkholderia pseudomallei [TaxId: 28450]

Probab=97.54  E-value=0.00011  Score=51.38  Aligned_cols=104  Identities=5%  Similarity=-0.012  Sum_probs=79.3

Q ss_pred             HHHHHHhHheeeeeccccCCcccceeeccceeEEEECCCccCchhhhhhcCccccccccCCCCccccCCCChHHHHHHHH
Q 043189           45 EETVQNAVKSWEMELSHKTSLNDFKTINPEKFKLIVNGRKDLSGEETLQLGSYNALLKNSLPKEFQYYRADEETFKSSHD  124 (182)
Q Consensus        45 e~~VqnlvktwemE~shK~~~~dw~si~~~~f~~s~Ngg~~~~~~~~~~~G~Yn~~l~~~lp~~~~~Y~~~~e~f~~s~~  124 (182)
                      .++|+++.+.|+     +-|++.+.++-.+.+.+..++|...     .           ++.+.    ..+++.+...+.
T Consensus         5 ~~~v~~~~~a~~-----~~D~~~~~~~~a~D~~~~~~~~~~~-----~-----------~~~g~----~~G~~~~~~~~~   59 (131)
T d3ebta1           5 MQTVRESYEAFH-----RRDLPGVLAALAPDVRWTHPDGMSP-----Y-----------GLGGT----KHGHDEVIAFIR   59 (131)
T ss_dssp             HHHHHHHHHHHH-----TTCHHHHHTTEEEEEEEEECGGGGG-----G-----------TCCEE----EEHHHHHHHHHH
T ss_pred             HHHHHHHHHHHH-----cCCHHHHHHHhCcceEEEEcCCCcc-----c-----------Ccccc----ccchHHHHHhhh
Confidence            467888877664     4667777777777777777665311     0           00011    236788999999


Q ss_pred             HHHHhCCCCceeEEEEeeeCCCEEEEEEEEEeeeeccccccCCCCCEEEEEeEEEEEC
Q 043189          125 AFRSAFPRGFAWEVISVFSGPPVVAYKFRHWGYFEGPFQGHAPTGEMVEFYGIGIMKV  182 (182)
Q Consensus       125 ~f~~AFPdGf~wEVleV~s~pp~VafrwrhwGt~~G~F~G~~pTGk~Vei~Gi~i~rV  182 (182)
                      .+...+++ +.+++++++++++.|+..|+..|+.        +||+.+++.++.+++|
T Consensus        60 ~~~~~~~~-~~~~~~~~~~~g~~v~~~~~~~~~~--------~~G~~~~~~~~~~~~~  108 (131)
T d3ebta1          60 HVPTHIAE-MRLAPDEFIESGERIVVLGTRRVTA--------VNGRSATLKFVHVWRF  108 (131)
T ss_dssp             HGGGTEEE-EEEEEEEEEEETTEEEEEEEEEEEE--------TTSCEEEEEEEEEEEE
T ss_pred             hhccccCc-ceeeEEEEEeccceEEEEEEEEEEe--------cCCCeeEEEEEEEEEE
Confidence            89899998 9999999999999999999988874        7999999999998875

>d1nwwa_ d.17.4.8 (A:) Limonene-1,2-epoxide hydrolase {Rhodococcus erythropolis [TaxId: 1833]}

class: Alpha and beta proteins (a+b)
fold: Cystatin-like
superfamily: NTF2-like
family: Limonene-1,2-epoxide hydrolase-like
domain: Limonene-1,2-epoxide hydrolase
species: Rhodococcus erythropolis [TaxId: 1833]

Probab=97.53  E-value=0.00019  Score=51.91  Aligned_cols=61  Identities=13%  Similarity=0.097  Sum_probs=54.7

Q ss_pred             CChHHHHHHHHHHHHhCCCCceeEEEEeeeCCCEEEEEEEEEeeeeccccccCCCCCEEEEEeEEEEEC
Q 043189          114 ADEETFKSSHDAFRSAFPRGFAWEVISVFSGPPVVAYKFRHWGYFEGPFQGHAPTGEMVEFYGIGIMKV  182 (182)
Q Consensus       114 ~~~e~f~~s~~~f~~AFPdGf~wEVleV~s~pp~VafrwrhwGt~~G~F~G~~pTGk~Vei~Gi~i~rV  182 (182)
                      .+++.+.+.+..+..++++ +.|++..++++++.|+..|..++       +..++|+.+++.++.+++|
T Consensus        58 ~G~e~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~v~~~~~~~~-------~~~~~G~~~~~~~~~~~~~  118 (145)
T d1nwwa_          58 YGRDAVEQTLAGLFTVMSI-DAVETFHIGSSNGLVYTERVDVL-------RALPTGKSYNLSILGVFQL  118 (145)
T ss_dssp             ESHHHHHHHHHHHHHHEEE-EEEEEEEEEEETTEEEEEEEEEE-------EETTTCCEEEEEEEEEEEE
T ss_pred             cCHHHHHHHHHhhhhhccc-ccceEEEEEecCceEEEEEeeec-------ccccCCceeEEEEEEEEEE
Confidence            4789999999999999998 99999999999999999887544       4779999999999999875

>d1z1sa1 d.17.4.10 (A:1-129) Uncharacterized protein PA3332 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a+b)
fold: Cystatin-like
superfamily: NTF2-like
family: PhzA/PhzB-like
domain: Uncharacterized protein PA3332
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=96.76  E-value=0.00063  Score=46.88  Aligned_cols=104  Identities=12%  Similarity=0.040  Sum_probs=68.1

Q ss_pred             HHHHHHhHheeeeeccccCCcccceeeccceeEEEECCCccCchhhhhhcCccccccccCCCCccccCCCChHHHHHHHH
Q 043189           45 EETVQNAVKSWEMELSHKTSLNDFKTINPEKFKLIVNGRKDLSGEETLQLGSYNALLKNSLPKEFQYYRADEETFKSSHD  124 (182)
Q Consensus        45 e~~VqnlvktwemE~shK~~~~dw~si~~~~f~~s~Ngg~~~~~~~~~~~G~Yn~~l~~~lp~~~~~Y~~~~e~f~~s~~  124 (182)
                      .++|++++|.|+     .-|.+.|.+.-.+...+...++++.                  .|+    .-.|++.+.+...
T Consensus         4 ~eiv~~~~~~~~-----~gD~~~~~~l~a~D~v~~~p~~~~~------------------~~~----~~~G~~~i~~~~~   56 (129)
T d1z1sa1           4 KEILVHSLRLLE-----NGDARGWCDLFHPEGVLEFPYAPPG------------------WKT----RFEGRETIWAHMR   56 (129)
T ss_dssp             HHHHHHHHHHHH-----TTCHHHHHHTEEEEEEEECSSCCTT------------------SCC----EEESHHHHHHTTT
T ss_pred             HHHHHHHHHHHH-----cCCHHHHHHHhcCceEEEEecCCcc------------------cce----EEeCHHHHHHHHH
Confidence            466777766443     4556666666555555544333210                  011    1246677777777


Q ss_pred             HHHHhCCCCceeEEEEeeeCCCEEEEEEEEEeeeeccccccCCCCCEEEEEeEEEEEC
Q 043189          125 AFRSAFPRGFAWEVISVFSGPPVVAYKFRHWGYFEGPFQGHAPTGEMVEFYGIGIMKV  182 (182)
Q Consensus       125 ~f~~AFPdGf~wEVleV~s~pp~VafrwrhwGt~~G~F~G~~pTGk~Vei~Gi~i~rV  182 (182)
                      .+.+++|..+........++++.|++.|+..++       +++||+.+++.++.+++|
T Consensus        57 ~~~~~~~~~~~~~~~~~~~d~~~v~~~~~~~~~-------~~~~G~~~~~~~~~~~~~  107 (129)
T d1z1sa1          57 LFPEHLTVRFTDVQFYETADPDLAIGEFHGDGV-------ATVSGGKLAQDYISVLRT  107 (129)
T ss_dssp             TGGGTEEEEECCCEEECCSSTTEEEEEEEEEEE-------ETTTCCEEEEEEEEEEEE
T ss_pred             hhhhccccccceeEEEEEecCCEEEEEEEEEeE-------EecCCeEEEEEEEEEEEE
Confidence            777888763333344456788999999998888       568999999999999885

>d3dxoa1 d.17.4.19 (A:1-117) Uncharacterized protein Atu0744 {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a+b)
fold: Cystatin-like
superfamily: NTF2-like
family: Atu0744-like
domain: Uncharacterized protein Atu0744
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=96.75  E-value=0.0038  Score=43.40  Aligned_cols=57  Identities=11%  Similarity=0.166  Sum_probs=48.1

Q ss_pred             CChHHHHHHHHHHHHhCCCCceeEEE-EeeeCCCEEEEEEEEEeeeeccccccCCCCCEEEEEeEEEEEC
Q 043189          114 ADEETFKSSHDAFRSAFPRGFAWEVI-SVFSGPPVVAYKFRHWGYFEGPFQGHAPTGEMVEFYGIGIMKV  182 (182)
Q Consensus       114 ~~~e~f~~s~~~f~~AFPdGf~wEVl-eV~s~pp~VafrwrhwGt~~G~F~G~~pTGk~Vei~Gi~i~rV  182 (182)
                      .|++.+......+..+||+ +.+++. .+-+.++.+.++|+..           ++|+.+.+.|+++.+|
T Consensus        45 ~G~~ai~~~~~~~~~~~~~-~~~~~~~~v~~~~~~~~~~w~~~-----------~~~~~~~~~G~d~~~~  102 (117)
T d3dxoa1          45 EGQQGIAAMIEAARQKFPG-YRFVLAGTPDGHGNFTRFSWRLI-----------SPDGDDVAGGTDVVSL  102 (117)
T ss_dssp             EHHHHHHHHHHHHHHHSTT-CEEEEEEEEEEETTEEEEEEEEE-----------CTTSCEEEEEEEEEEE
T ss_pred             ccHHHHHHHHHHHHHhCCC-cEEEEEEEEecCCCEEEEEEEEe-----------cCCCCeEEEEEEEEEE
Confidence            5899999999999999998 999976 5557799999999854           3466788999999875

>d1s5aa_ d.17.4.10 (A:) Hypothetical protein YesE {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a+b)
fold: Cystatin-like
superfamily: NTF2-like
family: PhzA/PhzB-like
domain: Hypothetical protein YesE
species: Bacillus subtilis [TaxId: 1423]

Probab=96.54  E-value=0.00097  Score=46.84  Aligned_cols=60  Identities=12%  Similarity=0.068  Sum_probs=50.1

Q ss_pred             ChHHHHHHHHHHHHhCCCCceeEEEEe--eeCCCEEEEEEEEEeeeeccccccCCCCCEEEEEeEEEEEC
Q 043189          115 DEETFKSSHDAFRSAFPRGFAWEVISV--FSGPPVVAYKFRHWGYFEGPFQGHAPTGEMVEFYGIGIMKV  182 (182)
Q Consensus       115 ~~e~f~~s~~~f~~AFPdGf~wEVleV--~s~pp~VafrwrhwGt~~G~F~G~~pTGk~Vei~Gi~i~rV  182 (182)
                      |++.+.+....+...||+ ..+++..+  .++++.|++.|+..|+       ++|||+.+++.++.+++|
T Consensus        51 G~~~i~~~~~~~~~~~~~-~~~~~~~~~~~~d~~~v~~~~~~~~~-------~~~tG~~~~~~~~~~~~~  112 (139)
T d1s5aa_          51 GKAAIYDYIKDYPKQIHL-SSFTAPTVYRSADSNTVIAEFQCDGH-------VIETGLPYRQSYISVIET  112 (139)
T ss_dssp             SHHHHHHHHTTHHHHEEE-EEECCCEEEEBSSSSEEEEEEEEEEE-------ETTTCCBCCCEEEEEEEE
T ss_pred             chHHHHHhhhhchhhccc-ceeeEEEeeeeecCccceeEEEeecc-------cccccccceeeEEEEEEE
Confidence            678888888889999998 77776555  4778899999987777       479999999999998875

>d2k54a1 d.17.4.29 (A:1-123) Uncharacterized protein Atu0742 {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a+b)
fold: Cystatin-like
superfamily: NTF2-like
family: Atu0742-like
domain: Uncharacterized protein Atu0742
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=96.06  E-value=0.0074  Score=42.16  Aligned_cols=97  Identities=14%  Similarity=0.042  Sum_probs=64.9

Q ss_pred             HHHHHHHhHheeeeeccccCCcccceeeccceeEEEECCCccCchhhhhhcCccccccccCCCCccccCCCChHHHHHHH
Q 043189           44 IEETVQNAVKSWEMELSHKTSLNDFKTINPEKFKLIVNGRKDLSGEETLQLGSYNALLKNSLPKEFQYYRADEETFKSSH  123 (182)
Q Consensus        44 Le~~VqnlvktwemE~shK~~~~dw~si~~~~f~~s~Ngg~~~~~~~~~~~G~Yn~~l~~~lp~~~~~Y~~~~e~f~~s~  123 (182)
                      +|.+||+.+.     |.-+-|++.+.+.-.+.+.+.-.++.                          ....+++.++...
T Consensus         5 ~~~~V~~~~~-----A~~~~D~e~~~~~~aeD~~~~~~~~~--------------------------~~~~g~~~i~~~~   53 (123)
T d2k54a1           5 IELPVQKQLE-----AYNARDIDAFMAWWADDCQYYAFPAT--------------------------LLAGNAAEIRVRH   53 (123)
T ss_dssp             HHHHHHHHHH-----HHHHTCHHHHHHTEEEEEEEEETTTE--------------------------EEEESHHHHHHHH
T ss_pred             HHHHHHHHHH-----HHhCCCHHHHHHhcCCCeEEEcCCCc--------------------------ceechHHHHHHHH
Confidence            5677777754     44456666666666665555321111                          0122556666666


Q ss_pred             HHHHHhCCCCceeEEEEeeeCCCEEEEEEEEEeeeeccccccCCCCCEEEEEeEEEEEC
Q 043189          124 DAFRSAFPRGFAWEVISVFSGPPVVAYKFRHWGYFEGPFQGHAPTGEMVEFYGIGIMKV  182 (182)
Q Consensus       124 ~~f~~AFPdGf~wEVleV~s~pp~VafrwrhwGt~~G~F~G~~pTGk~Vei~Gi~i~rV  182 (182)
                      ... .+.|+ +.|++..+++.++.|+..|+..|++.         |+.+++.++++++|
T Consensus        54 ~~~-~~~~~-~~~~~~~~~~~gd~vv~~~~~~~~~~---------g~~~~~~~~~vf~~  101 (123)
T d2k54a1          54 IER-FKEPD-LYGELLTRVIVGNVVIDHETVTRNFP---------EGKGEVDVACIYEV  101 (123)
T ss_dssp             HHH-TTCTT-CEEEEEEEEEETTEEEEEEEEECCBT---------TBCCEEEEEEEEEE
T ss_pred             Hhh-hcccc-ceeeeEEEEecCCEEEEEEEEEEEcC---------CCeEEEEEEEEEEE
Confidence            543 35687 99999999999999999999888754         55677888887764

>d1tuha_ d.17.4.11 (A:) Hypothetical protein egc068 from a soil-derived mobile gene cassette {uncultured organism [TaxId: 155900]}

class: Alpha and beta proteins (a+b)
fold: Cystatin-like
superfamily: NTF2-like
family: Hypothetical protein egc068 from a soil-derived mobile gene cassette
domain: Hypothetical protein egc068 from a soil-derived mobile gene cassette
species: uncultured organism [TaxId: 155900]

Probab=95.90  E-value=0.028  Score=38.31  Aligned_cols=61  Identities=7%  Similarity=-0.004  Sum_probs=50.2

Q ss_pred             CChHHHHHHHHHHHHhCCCCceeEEEEeeeCCCEEEEEEEEEeeeeccccccCCCCCEEEEEeEEEEEC
Q 043189          114 ADEETFKSSHDAFRSAFPRGFAWEVISVFSGPPVVAYKFRHWGYFEGPFQGHAPTGEMVEFYGIGIMKV  182 (182)
Q Consensus       114 ~~~e~f~~s~~~f~~AFPdGf~wEVleV~s~pp~VafrwrhwGt~~G~F~G~~pTGk~Vei~Gi~i~rV  182 (182)
                      .+++.+......+...+++.+..++..+++.++.+++.++..++.        ++|+.++..++.+++|
T Consensus        48 ~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~--------~~G~~~~~~~~~v~~~  108 (131)
T d1tuha_          48 KGREAIFAQFGRYGGETGGTFKAVLLHVLKSDDGRVIGIHRNTAE--------RGGKRLDVGCCIVFEF  108 (131)
T ss_dssp             ESHHHHHHHHHHHHHTTTTCCEEEEEEEEECTTSCEEEEEEEEEE--------ETTEEEEEEEEEEEEE
T ss_pred             ccHHHHHHHHHhhhhhcCCCceEEEEEEEecCCEEEEEEEEEEee--------cccccceeeEEEEEEE
Confidence            366777777777777888779999999999999988887766554        5899999999999875

>d2bnga1 d.17.4.8 (A:13-144) Uncharacterized protein Mb2760 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a+b)
fold: Cystatin-like
superfamily: NTF2-like
family: Limonene-1,2-epoxide hydrolase-like
domain: Uncharacterized protein Mb2760
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=95.87  E-value=0.012  Score=41.32  Aligned_cols=57  Identities=11%  Similarity=0.056  Sum_probs=46.6

Q ss_pred             ChHHHHHHHHHHHHhCCCCceeEEEEeeeCCCEEEEEEEEEeeeeccccccCCCCCEEEEEeEEEEEC
Q 043189          115 DEETFKSSHDAFRSAFPRGFAWEVISVFSGPPVVAYKFRHWGYFEGPFQGHAPTGEMVEFYGIGIMKV  182 (182)
Q Consensus       115 ~~e~f~~s~~~f~~AFPdGf~wEVleV~s~pp~VafrwrhwGt~~G~F~G~~pTGk~Vei~Gi~i~rV  182 (182)
                      +++.+......+... ++ +.+++..+.++++.|+..|+-.+++         +|+++.+.+.++++|
T Consensus        44 G~~~~~~~~~~~~~~-~~-~~~~~~~~~~~gd~v~~~~~~~~~~---------~g~~~~~~~~~~~~v  100 (132)
T d2bnga1          44 GGRRTATLLRRMQGR-VG-FEVKIHRIGADGAAVLTERTDALII---------GPLRVQFWVCGVFEV  100 (132)
T ss_dssp             CHHHHHHHHHTTTTT-CE-EEEEEEEEEEETTEEEEEEEEEEEE---------TTEEEEEEEEEEEEE
T ss_pred             hHHHHHHHHHhcccc-cC-cceEEEEeeccCCceEEEEEEEEEE---------CCcEEEEEEEEEEEE
Confidence            667777777655444 45 8999999999999999999877775         689999999999875

>d2a15a1 d.17.4.3 (A:5-136) Hypothetical protein Rv0760c {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a+b)
fold: Cystatin-like
superfamily: NTF2-like
family: Ketosteroid isomerase-like
domain: Hypothetical protein Rv0760c
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=95.82  E-value=0.027  Score=38.34  Aligned_cols=61  Identities=18%  Similarity=0.059  Sum_probs=47.4

Q ss_pred             CChHHHHHHHHHHHHhCCCCceeEEEEeeeCCCEEEEEEEEEeeeeccccccCCCCCEEEEEeEEEEEC
Q 043189          114 ADEETFKSSHDAFRSAFPRGFAWEVISVFSGPPVVAYKFRHWGYFEGPFQGHAPTGEMVEFYGIGIMKV  182 (182)
Q Consensus       114 ~~~e~f~~s~~~f~~AFPdGf~wEVleV~s~pp~VafrwrhwGt~~G~F~G~~pTGk~Vei~Gi~i~rV  182 (182)
                      .+++.+...+..+...++..+......+.++++.|+..|+..+        ..++|+++++.++.+++|
T Consensus        51 ~G~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--------~~~~G~~~~~~~v~~~~~  111 (132)
T d2a15a1          51 KGKEAVGAFFDTHIAANRLTVTCEETFPSSSPDEIAHILVLHS--------EFDGGFTSEVRGVFTYRV  111 (132)
T ss_dssp             ESHHHHHHHHHHHTTTTTCEEEEEEEEECSSTTEEEEEEEEEE--------EETTTEEEEEEEEEEEEE
T ss_pred             ehHHHHHHhhhhhhccccceEEEEEEEEecCCcEEEEEEEEee--------ccccceeEEEEEEEEEEE
Confidence            4677777777777777776456566667778999999998544        358999999999999885

>d1ohpa1 d.17.4.3 (A:1-125) Delta-5-3-ketosteroid isomerase, steroid delta-isomerase, KSI {Comamonas testosteroni, also known as Pseudomonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a+b)
fold: Cystatin-like
superfamily: NTF2-like
family: Ketosteroid isomerase-like
domain: Delta-5-3-ketosteroid isomerase, steroid delta-isomerase, KSI
species: Comamonas testosteroni, also known as Pseudomonas testosteroni [TaxId: 285]

Probab=93.72  E-value=0.031  Score=37.54  Aligned_cols=59  Identities=10%  Similarity=-0.072  Sum_probs=46.9

Q ss_pred             CCChHHHHHHHHHHHHhCCCCceeEEEEeeeCCCEEEEEEEEEeeeeccccccCCCCCEEEEEeEEEEEC
Q 043189          113 RADEETFKSSHDAFRSAFPRGFAWEVISVFSGPPVVAYKFRHWGYFEGPFQGHAPTGEMVEFYGIGIMKV  182 (182)
Q Consensus       113 ~~~~e~f~~s~~~f~~AFPdGf~wEVleV~s~pp~VafrwrhwGt~~G~F~G~~pTGk~Vei~Gi~i~rV  182 (182)
                      ..|++.+......+...+|+ +.+. ..+...++.+++.|+..++         .+|+.+++.|+.+++|
T Consensus        45 ~~G~~~i~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~---------~~g~~~~~~~~~~~~~  103 (125)
T d1ohpa1          45 RSGTAAIREFYANSLKLPLA-VELT-QEVRAVANEAAFAFIVSFE---------YQGRKTVVAPIDHFRF  103 (125)
T ss_dssp             EESHHHHHHHHHHHTSSCCE-EEEC-SCCEEETTEEEEEEEEEEE---------ETTEEEEECCEEEEEE
T ss_pred             cccHHHHHHHHHHHhhcCCc-eEEE-EEEEEecceEEEEEEEEEe---------cCCceEEEEEEEEEEE
Confidence            45788999999999999998 6664 5567778899999987765         4678888888888774

>d1oh0a_ d.17.4.3 (A:) Delta-5-3-ketosteroid isomerase, steroid delta-isomerase, KSI {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a+b)
fold: Cystatin-like
superfamily: NTF2-like
family: Ketosteroid isomerase-like
domain: Delta-5-3-ketosteroid isomerase, steroid delta-isomerase, KSI
species: Pseudomonas putida [TaxId: 303]

Probab=90.56  E-value=0.26  Score=33.12  Aligned_cols=59  Identities=15%  Similarity=-0.065  Sum_probs=42.5

Q ss_pred             CChHHHHHHHHHHHHhCCCCceeEEEEeeeCCC-EEEEEEEEEeeeeccccccCCCCCEEEEEeEEEEEC
Q 043189          114 ADEETFKSSHDAFRSAFPRGFAWEVISVFSGPP-VVAYKFRHWGYFEGPFQGHAPTGEMVEFYGIGIMKV  182 (182)
Q Consensus       114 ~~~e~f~~s~~~f~~AFPdGf~wEVleV~s~pp-~VafrwrhwGt~~G~F~G~~pTGk~Vei~Gi~i~rV  182 (182)
                      .|++.+...+..+...++. ..+.+..+...++ .+++.|+..+         ..+|+.+++.|+.+++|
T Consensus        46 ~G~~~i~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~---------~~~g~~~~~~~~~~~~~  105 (125)
T d1oh0a_          46 HGREQIAAFYRQGLGGGKV-RACLTGPVRASHNGCGAMPFRVEM---------VWNGQPCALDVIDVMRF  105 (125)
T ss_dssp             EHHHHHHHHHHHHHSSSCC-EEEESSCCEECSSSEEEEEEEEEE---------ESSSSEEEEEEEEEEEE
T ss_pred             ccHHHHHHHHHHHHHhccc-ceEEEEEEEEcCCCEEEEEEEEEe---------ccccceEEEEEEEEEEE
Confidence            3678888888888889988 7777755555555 4444545433         34799999999999875

>d3en8a1 d.17.4.20 (A:1-127) Uncharacterized protein BxeB2092 {Burkholderia xenovorans [TaxId: 36873]}

class: Alpha and beta proteins (a+b)
fold: Cystatin-like
superfamily: NTF2-like
family: Rpa4348-like
domain: Uncharacterized protein BxeB2092
species: Burkholderia xenovorans [TaxId: 36873]

Probab=85.27  E-value=1.4  Score=30.21  Aligned_cols=31  Identities=16%  Similarity=0.114  Sum_probs=23.7

Q ss_pred             HHHhCCCC-ceeEEEEeeeCCCEEEEEEEEEe
Q 043189          126 FRSAFPRG-FAWEVISVFSGPPVVAYKFRHWG  156 (182)
Q Consensus       126 f~~AFPdG-f~wEVleV~s~pp~VafrwrhwG  156 (182)
                      |...+|.. ..+++..++++|+.|++.|+.++
T Consensus        53 ~~~~~~~~~~~~~~~~~~~~g~~vv~~~~~t~   84 (127)
T d3en8a1          53 LRSHHPGKPAGFEVRRIQGEGNLWITEYSISY   84 (127)
T ss_dssp             HHHHTTCSCSEEEEEEEEEETTEEEEEEEEEE
T ss_pred             HHHHHhccCccceeEEEecCCCEEEEEEEECC
Confidence            34455642 66789999999999999998643