Citrus Sinensis ID: 043282

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------12
Protein Sequence
MINIFLKRCIIGSIFLALHDASDVFMEVAKVFKYFENELGATVIFGLFAISRVILQLIFFSFRVIKCTRDMFIYYMFNTMLLMLFVFQIYWWVLISSMIWRRLKSGKLREDIRSALKES
Secondary Structure (PSIPRED)
cEEEEccccHHHHHHHHHHccHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHEEEEEcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccc
Secondary Structure Prediction (SSPRO)
cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHEEEEccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccc
Coil and Loop (DISEMBL)
MINIFLKRCIIGSIFLALHDASDVFMEVAKVFKYFENELGATVIFGLFAISRVILQLIFFSFRVIKCTRDMFIYYMFNTMLLMLFVFQIYWWVLISSMIWRRLKSGKLREDIRSALKES
Flexible Loop (DISEMBL)
MINIFLKRCIIGSIFLALHDASDVFMEVAKVFKYFENELGATVIFGLFAISRVILQLIFFSFRVIKCTRDMFIYYMFNTMLLMLFVFQIYWWVLISSMIWrrlksgklredirsalkes
Low Complexity Region (SEG)
MINIFLKRCIIGSIFLALHDASDVFMEVAKVFKYFENELGATVIFGLFAISRVILQLIFFSFRVIKCTRDMFIYYMFNTMLLMLFVFQIYWWVLISSMIWRRLKSGKLREDIRSALKES
Disordered region (IsUnstruct)
*INIFLKRCIIGSIFLALHDASDVFMEVAKVFKYFENELGATVIFGLFAISRVILQLIFFSFRVIKCTRDMFIYYMFNTMLLMLFVFQIYWWVLISSMIWRRLK***************
Disordered Region (DISOPRED)
MINIFLKRCIIGSIFLALHDASDVFMEVAKVFKYFENELGATVIFGLFAISRVILQLIFFSFRVIKCTRDMFIYYMFNTMLLMLFVFQIYWWVLISSMIWRRLKSGK************
Disordered Region (DISEMBL)
MINIFLKRCIIGSIFLALHDASDVFMEVAKVFKYFENELGATVIFGLFAISRVILQLIFFSFRVIKCTRDMFIYYMFNTMLLMLFVFQIYWWVLISSMIWRRLKSGKLREDIRSALKES
Disordered Region (DISPRO)
MINIFLKRCIIGSIFLALHDASDVFMEVAKVFKYFENELGATVIFGLFAISRVILQLIFFSFRVIKCTRDMFIYYMFNTMLLMLFVFQIYWWVLISSMIWRRLKSG*************
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
ooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
ooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooHHHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
SSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MINIFLKRCIIGSIFLALHDASDVFMEVAKVFKYFENELGATVIFGLFAISRVILQLIFFSFRVIKCTRDMFIYYMFNTMLLMLFVFQIYWWVLISSMIWRRLKSGKLREDIRSALKES
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	119	2.2.26 [Sep-21-2011]
Q9LJK3	296	LAG1 longevity assurance	yes	no	0.915	0.368	0.560	6e-28
Q84QC0	284	ASC1-like protein 3 OS=Or	yes	no	0.873	0.366	0.516	5e-25
Q9LDF2	310	LAG1 longevity assurance	no	no	0.865	0.332	0.440	6e-19
Q6EUN0	309	ASC1-like protein 1 OS=Or	no	no	0.873	0.336	0.411	5e-18
Q6NQI8	308	LAG1 longevity assurance	no	no	0.873	0.337	0.433	1e-17
Q6YWS8	303	ASC1-like protein 2 OS=Or	no	no	0.882	0.346	0.380	4e-14
Q8W4Y5	303	ASC1-like protein OS=Sola	N/A	no	0.899	0.353	0.36	5e-14
Q9D6J1	393	Ceramide synthase 4 OS=Mu	yes	no	0.907	0.274	0.362	1e-12
Q5E9R6	393	Ceramide synthase 4 OS=Bo	yes	no	0.907	0.274	0.301	2e-10
Q96G23	380	Ceramide synthase 2 OS=Ho	yes	no	0.857	0.268	0.369	5e-10

>sp|Q9LJK3|LAG12_ARATH LAG1 longevity assurance homolog 2 OS=Arabidopsis thaliana GN=LAG2 PE=1 SV=1

 Score =  122 bits (306), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 69/123 (56%), Positives = 85/123 (69%), Gaps = 14/123 (11%)

Query: 11  IGSIFLALHDASDVFMEVAKVFKYFENELGATVIFGLFAISRVILQLIFFSFRVIKCTR- 69
           IG+I LALHDASDVFME AK+FKY E E GA+V F LFA+S ++L+LI+F F +I+ T  
Sbjct: 172 IGAIILALHDASDVFMETAKIFKYSEKEFGASVCFALFAVSWLLLRLIYFPFWIIRATSI 231

Query: 70  ------DM------FIYYMFNTMLLMLFVFQIYWWVLISSMIWRRLKS-GKLREDIRSAL 116
                 DM       +YY FNTMLLML VF IYWW LI +MI R LK+ GK+ EDIRS  
Sbjct: 232 ELLDYLDMTSAEGTLMYYSFNTMLLMLLVFHIYWWYLICAMIVRLLKNRGKVGEDIRSDS 291

Query: 117 KES 119
           ++ 
Sbjct: 292 EDD 294

Mediates resistance to sphinganine-analog mycotoxins (SAMs) by restoring the sphingolipid biosynthesis. Could salvage the transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi apparatus in ceramides-depleted cells after SAM exposure.
Arabidopsis thaliana (taxid: 3702)

>sp|Q84QC0|ASCL3_ORYSJ ASC1-like protein 3 OS=Oryza sativa subsp. japonica GN=Os03g0264000 PE=2 SV=1

 Score =  112 bits (281), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 61/118 (51%), Positives = 81/118 (68%), Gaps = 14/118 (11%)

Query: 11  IGSIFLALHDASDVFMEVAKVFKYFENELGATVIFGLFAISRVILQLIFFSFRVIKCTR- 69
           IG+I LALHDASDVF+E AK+ KY E ELGA++ FGLFA+S ++L+LI+F F +IK +  
Sbjct: 161 IGTIILALHDASDVFLETAKLCKYTEKELGASLFFGLFALSWLLLRLIYFPFWIIKTSSY 220

Query: 70  ------------DMFIYYMFNTMLLMLFVFQIYWWVLISSMIWRRLKS-GKLREDIRS 114
                          +YY+FNTMLL L VF IYWW LI  MI ++L + G++ ED+RS
Sbjct: 221 QSIISLRKLEKFPTTLYYIFNTMLLTLLVFHIYWWKLICLMIMKQLNNKGQVGEDVRS 278

Mediates resistance to sphinganine-analog mycotoxins (SAMs) by restoring the sphingolipid biosynthesis. Could salvage the transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi apparatus in ceramides-depleted cells after SAM exposure.

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q9LDF2|LAG11_ARATH LAG1 longevity assurance homolog 1 OS=Arabidopsis thaliana GN=LAG1 PE=1 SV=1

 Score = 92.8 bits (229), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 52/118 (44%), Positives = 74/118 (62%), Gaps = 15/118 (12%)

Query: 12  GSIFLALHDASDVFMEVAKVFKYFENELGATVIFGLFAISRVILQLIFFSFRVI------ 65
           GS+ LALHDASDVF+E+ K+ KY   E  A++ F LFA+S V+L+LI++ F ++      
Sbjct: 183 GSVILALHDASDVFLEIGKMSKYCGAESLASISFVLFALSWVVLRLIYYPFWILWSTSYQ 242

Query: 66  --------KCTRDMFIYYMFNTMLLMLFVFQIYWWVLISSMIWRRLKS-GKLREDIRS 114
                   K      +YYMFNT+L  L V  I+WWVLI  M+ ++++  GKL ED+RS
Sbjct: 243 IIMTVDKEKHPNGPILYYMFNTLLYFLLVLHIFWWVLIYRMLVKQVQDRGKLSEDVRS 300

Mediates resistance to sphinganine-analog mycotoxins (SAMs) by restoring the sphingolipid biosynthesis. Could salvage the transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi apparatus in ceramides-depleted cells after SAM exposure.

Arabidopsis thaliana (taxid: 3702)

>sp|Q6EUN0|ASCL1_ORYSJ ASC1-like protein 1 OS=Oryza sativa subsp. japonica GN=Os02g0581300 PE=2 SV=1

 Score = 89.4 bits (220), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 49/119 (41%), Positives = 72/119 (60%), Gaps = 15/119 (12%)

Query: 11  IGSIFLALHDASDVFMEVAKVFKYFENELGATVIFGLFAISRVILQLIFFSFRVIKCTR- 69
           +GS+ LA+HDASDVF+EV K+ KY   +L A V F LF +S V+L+L +F F +++ T  
Sbjct: 181 VGSVVLAIHDASDVFLEVGKMAKYSHCDLLANVAFLLFVVSWVLLRLTYFPFWILRSTSY 240

Query: 70  --------------DMFIYYMFNTMLLMLFVFQIYWWVLISSMIWRRLKSGKLREDIRS 114
                             YY+FN++L  L V  IYWWVLI  M+ R++K+  + +D+RS
Sbjct: 241 EVLLTLDKKKHNFDGPIYYYVFNSLLFSLLVLHIYWWVLIYRMLVRQIKTRNVGDDVRS 299

Mediates resistance to sphinganine-analog mycotoxins (SAMs) by restoring the sphingolipid biosynthesis. Could salvage the transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi apparatus in ceramides-depleted cells after SAM exposure.

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q6NQI8|LAG13_ARATH LAG1 longevity assurance homolog 3 OS=Arabidopsis thaliana GN=At1g13580 PE=2 SV=2

 Score = 88.6 bits (218), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 52/120 (43%), Positives = 72/120 (60%), Gaps = 16/120 (13%)

Query: 11  IGSIFLALHDASDVFMEVAKVFKYFENELGATVIFGLFAISRVILQLIFFSFRVIKCT-- 68
           +GS+ LALHDASDVF+EV K+ KY   E  A+  F LF +S +IL+LI++ F ++  T  
Sbjct: 179 VGSVVLALHDASDVFLEVGKMSKYSGAERIASFSFILFVLSWIILRLIYYPFWILWSTSY 238

Query: 69  -------------RDMFIYYMFNTMLLMLFVFQIYWWVLISSMIWRRLKS-GKLREDIRS 114
                             YYMFNT+L  L V  IYWWVL+  M+ ++++  GKL ED+RS
Sbjct: 239 EVVLELDKDKHPIEGPIYYYMFNTLLYCLLVLHIYWWVLMYRMLVKQIQDRGKLSEDVRS 298

Mediates resistance to sphinganine-analog mycotoxins (SAMs) by restoring the sphingolipid biosynthesis. Could salvage the transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi apparatus in ceramides-depleted cells after SAM exposure.

Arabidopsis thaliana (taxid: 3702)

>sp|Q6YWS8|ASCL2_ORYSJ ASC1-like protein 2 OS=Oryza sativa subsp. japonica GN=Os02g0728300 PE=3 SV=2

 Score = 76.6 bits (187), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 46/121 (38%), Positives = 68/121 (56%), Gaps = 16/121 (13%)

Query: 11  IGSIFLALHDASDVFMEVAKVFKYFENELGATVIFGLFAISRVILQLIFFSFRVIKCTRD 70
           +GSI LA+HDASDVF+E+ K+ KY   +L A V F +F  S  +L+LI++ F ++  T  
Sbjct: 174 VGSIVLAIHDASDVFLELGKISKYSGYQLLADVSFLIFVCSWAVLRLIYYPFWILWSTSY 233

Query: 71  MFI---------------YYMFNTMLLMLFVFQIYWWVLISSMIWRR-LKSGKLREDIRS 114
             +               YY+FN +L  L V  IYWWVL+  M+  + L  G + +D+RS
Sbjct: 234 EVVPMLDKKKHKFDGPLHYYVFNCLLFSLLVLNIYWWVLMYRMLVEQILSKGHVGDDVRS 293

Query: 115 A 115
            
Sbjct: 294 G 294

Mediates resistance to sphinganine-analog mycotoxins (SAMs) by restoring the sphingolipid biosynthesis. Could salvage the transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi apparatus in ceramides-depleted cells after SAM exposure.

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q8W4Y5|ASCL_SOLLC ASC1-like protein OS=Solanum lycopersicum PE=2 SV=1

 Score = 76.3 bits (186), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 45/125 (36%), Positives = 72/125 (57%), Gaps = 18/125 (14%)

Query: 11  IGSIFLALHDASDVFMEVAKVFKYFENELGATVIFGLFAISRVILQLIFFSFRVIKCTR- 69
           +GS+ LA+HDASD+F+E+ K+ KY   E  A   F    +S +IL+LI++ F V+  T  
Sbjct: 178 VGSVVLAIHDASDIFLEIGKMSKYSGAE--ALASFRYLCLSWIILRLIYYPFWVLWSTSY 235

Query: 70  --------------DMFIYYMFNTMLLMLFVFQIYWWVLISSMIWRRLKS-GKLREDIRS 114
                             YY+FN++L  L V  IYWWVLI  M+ +++++ G+L +D+RS
Sbjct: 236 EVLQTLDKEKHKVDGPIYYYIFNSLLFCLLVLHIYWWVLIYRMLVKQIQARGQLSDDVRS 295

Query: 115 ALKES 119
             ++ 
Sbjct: 296 DSEDE 300

Mediates resistance to sphinganine-analog mycotoxins (SAMs) by restoring the sphingolipid biosynthesis. Could salvage the transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi apparatus in ceramides-depleted cells after SAM exposure.

Solanum lycopersicum (taxid: 4081)

>sp|Q9D6J1|CERS4_MOUSE Ceramide synthase 4 OS=Mus musculus GN=Cers4 PE=1 SV=1

 Score = 71.6 bits (174), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 42/116 (36%), Positives = 63/116 (54%), Gaps = 8/116 (6%)

Query: 11  IGSIFLALHDASDVFMEVAKVFKYFENELGATVIFGLFAISRVILQLIFFSFRVI----- 65
           IG++ L LHD SD  +E  K+  Y     G   +F +FA+     +LIFF  +VI     
Sbjct: 231 IGAVVLLLHDCSDYLLEGCKILNYAHFRRGCDALFIMFALVFFYTRLIFFPTQVIYTSVY 290

Query: 66  ---KCTRDMFIYYMFNTMLLMLFVFQIYWWVLISSMIWRRLKSGKLREDIRSALKE 118
              K +   F YY F  +L+ML +  +YW+ LI  M++  L  G++ EDIRS ++E
Sbjct: 291 DSIKNSGPFFGYYFFIVLLVMLQILHVYWFCLILRMLYSFLHKGQMTEDIRSDVEE 346

May be either a bona fide (dihydro)ceramide synthase or a modulator of its activity. When overexpressed in cells is involved in the production of sphingolipids containing different fatty acid donors (N-linked stearoyl- (C18) or arachidoyl- (C20) ceramides) in a fumonisin B1-independent manner.

Mus musculus (taxid: 10090)

>sp|Q5E9R6|CERS4_BOVIN Ceramide synthase 4 OS=Bos taurus GN=CERS4 PE=2 SV=1

 Score = 64.7 bits (156), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 35/116 (30%), Positives = 63/116 (54%), Gaps = 8/116 (6%)

Query: 11  IGSIFLALHDASDVFMEVAKVFKYFENELGATVIFGLFAISRVILQLIFFSFRVIKCT-- 68
           IGS+ L LHD++D  +E +K+F Y         +F +F++     +L+ F  R++  T  
Sbjct: 231 IGSLVLLLHDSADYLLEASKLFNYMHWRRMCDTLFIIFSLVFFYTRLVLFPTRILYTTFF 290

Query: 69  ------RDMFIYYMFNTMLLMLFVFQIYWWVLISSMIWRRLKSGKLREDIRSALKE 118
                    F YY  N +L++L +  ++W  LI  MI+  +K G++ +D+RS ++E
Sbjct: 291 ESIGNFSPFFGYYFLNILLVILQLLHVFWSWLILCMIYSFIKKGQMEKDVRSDVEE 346

May be either a bona fide (dihydro)ceramide synthase or a modulator of its activity. When overexpressed in cells is involved in the production of sphingolipids containing different fatty acid donors (N-linked stearoyl- (C18) or arachidoyl- (C20) ceramides) in a fumonisin B1-independent manner.

Bos taurus (taxid: 9913)

>sp|Q96G23|CERS2_HUMAN Ceramide synthase 2 OS=Homo sapiens GN=CERS2 PE=1 SV=1

 Score = 63.2 bits (152), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 41/111 (36%), Positives = 61/111 (54%), Gaps = 9/111 (8%)

Query: 12  GSIFLALHDASDVFMEVAKVFKYFENELGATVIFGLFAISRVILQLIFFSFRVIKCT--- 68
           G++ +ALHD+SD  +E AK+F Y   +     IF +FAI  +I +L+   F ++ CT   
Sbjct: 232 GTLIMALHDSSDYLLESAKMFNYAGWKNTCNNIFIVFAIVFIITRLVILPFWILHCTLVY 291

Query: 69  -----RDMFIYYMFNTMLLMLFVFQIYWWVLISSMIWRRLKSGKLREDIRS 114
                   F YY FN+M+ +L +  I+W  LI  M   +  +GKL ED RS
Sbjct: 292 PLELYPAFFGYYFFNSMMGVLQLLHIFWAYLILRMA-HKFITGKLVEDERS 341

Suppresses the growth of cancer cells. May be involved in sphingolipid synthesis.

Homo sapiens (taxid: 9606)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	119
449438412	289	PREDICTED: LAG1 longevity assurance homo	0.915	0.377	0.609	7e-30
374082402	289	longevity assurance protein 1-like prote	0.915	0.377	0.601	2e-29
356519703	348	PREDICTED: LAG1 longevity assurance homo	0.873	0.298	0.601	2e-28
356502719	346	PREDICTED: LAG1 longevity assurance homo	0.873	0.300	0.601	2e-28
255555457	315	longevity assurance factor, putative [Ri	0.882	0.333	0.588	5e-28
297741277	311	unnamed protein product [Vitis vinifera]	0.873	0.334	0.593	7e-28
224123486	287	predicted protein [Populus trichocarpa]	0.915	0.379	0.552	2e-27
224105549	279	predicted protein [Populus trichocarpa]	0.915	0.390	0.569	4e-27
7658241	297	LAG1 homolog 2 [Arabidopsis thaliana]	0.915	0.367	0.569	1e-26
388493182	168	unknown [Lotus japonicus]	0.873	0.619	0.576	2e-26

>gi|449438412|ref|XP_004136982.1| PREDICTED: LAG1 longevity assurance homolog 2-like [Cucumis sativus] gi|449526952|ref|XP_004170477.1| PREDICTED: LAG1 longevity assurance homolog 2-like [Cucumis sativus]

 Score =  134 bits (337), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 75/123 (60%), Positives = 87/123 (70%), Gaps = 14/123 (11%)

Query: 11  IGSIFLALHDASDVFMEVAKVFKYFENELGATVIFGLFAISRVILQLIFFSFRVIKCT-- 68
           IGS+ LALHDASDVFME AKVFKY E ELGA+V FG FAIS ++L+LIFF F VIK T  
Sbjct: 166 IGSVILALHDASDVFMEAAKVFKYSEKELGASVFFGFFAISWLVLRLIFFPFWVIKATSY 225

Query: 69  -----------RDMFIYYMFNTMLLMLFVFQIYWWVLISSMIWRRLKS-GKLREDIRSAL 116
                          IYY+FNTMLLML VF IYWW+LI SMI R+LK+ GK+ EDIRS  
Sbjct: 226 DLCAYLKLSDVNSRLIYYVFNTMLLMLLVFHIYWWLLICSMISRQLKNRGKVGEDIRSDS 285

Query: 117 KES 119
           ++ 
Sbjct: 286 EDE 288

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|374082402|gb|AEY81371.1| longevity assurance protein 1-like protein [Gossypium hirsutum]

 Score =  132 bits (333), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 74/123 (60%), Positives = 89/123 (72%), Gaps = 14/123 (11%)

Query: 11  IGSIFLALHDASDVFMEVAKVFKYFENELGATVIFGLFAISRVILQLIFFSFRVIKCTR- 69
           IGSI LALHDASDVF+E AKVFKY E+ELGA+V FGLFAIS ++L+LIFF F VIK +  
Sbjct: 166 IGSIILALHDASDVFLEAAKVFKYSESELGASVCFGLFAISWLLLRLIFFPFWVIKTSSY 225

Query: 70  ------------DMFIYYMFNTMLLMLFVFQIYWWVLISSMIWRRLKS-GKLREDIRSAL 116
                        M +YY+FNTMLLML VF +YWW LI SMI R+LK+ GK+ EDIRS  
Sbjct: 226 DVREFLNLSESYPMSLYYVFNTMLLMLLVFHVYWWFLICSMIMRQLKNRGKVGEDIRSDS 285

Query: 117 KES 119
           ++ 
Sbjct: 286 EDD 288

Source: Gossypium hirsutum

Species: Gossypium hirsutum

Genus: Gossypium

Family: Malvaceae

Order: Malvales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356519703|ref|XP_003528509.1| PREDICTED: LAG1 longevity assurance homolog 2-like [Glycine max]

 Score =  129 bits (325), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 71/118 (60%), Positives = 84/118 (71%), Gaps = 14/118 (11%)

Query: 11  IGSIFLALHDASDVFMEVAKVFKYFENELGATVIFGLFAISRVILQLIFFSFRVIKCTR- 69
           +GSI LALHDASDVFME AKVFKY   E GA+V FG FA+S +IL+LIFF F VIK T  
Sbjct: 226 VGSIILALHDASDVFMEAAKVFKYSGREFGASVCFGFFAVSWLILRLIFFPFWVIKATSI 285

Query: 70  ------------DMFIYYMFNTMLLMLFVFQIYWWVLISSMIWRRLKS-GKLREDIRS 114
                        MF+YY+FNTML+ML +F IYWW LI +MI R+LK+ GK+ EDIRS
Sbjct: 286 DLQQVLSLSEGFHMFLYYVFNTMLIMLLIFHIYWWKLICAMILRQLKNRGKVGEDIRS 343

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356502719|ref|XP_003520164.1| PREDICTED: LAG1 longevity assurance homolog 2-like [Glycine max]

 Score =  129 bits (325), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 71/118 (60%), Positives = 84/118 (71%), Gaps = 14/118 (11%)

Query: 11  IGSIFLALHDASDVFMEVAKVFKYFENELGATVIFGLFAISRVILQLIFFSFRVIKCTR- 69
           +GSI LALHDASDVFME AKVFKY   E GA+V FG FA+S +IL+LIFF F VIK T  
Sbjct: 224 VGSIILALHDASDVFMEAAKVFKYSGREFGASVCFGFFAVSWLILRLIFFPFWVIKATSI 283

Query: 70  ------------DMFIYYMFNTMLLMLFVFQIYWWVLISSMIWRRLKS-GKLREDIRS 114
                        MF+YY+FNTML+ML +F IYWW LI +MI R+LK+ GK+ EDIRS
Sbjct: 284 DLQQVLNLSEGFHMFLYYVFNTMLIMLLIFHIYWWKLICAMILRQLKNRGKVGEDIRS 341

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255555457|ref|XP_002518765.1| longevity assurance factor, putative [Ricinus communis] gi|223542146|gb|EEF43690.1| longevity assurance factor, putative [Ricinus communis]

 Score =  128 bits (321), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 70/119 (58%), Positives = 86/119 (72%), Gaps = 14/119 (11%)

Query: 11  IGSIFLALHDASDVFMEVAKVFKYFENELGATVIFGLFAISRVILQLIFFSFRVIKCTRD 70
           IGSI LALHDASDVF+E AKVFKY   ELGA++ FG+FA+S +IL+LIFF F VIK + +
Sbjct: 166 IGSIILALHDASDVFLEAAKVFKYSGKELGASIFFGMFAVSWLILRLIFFPFWVIKASSN 225

Query: 71  MFI-------------YYMFNTMLLMLFVFQIYWWVLISSMIWRRLKS-GKLREDIRSA 115
             +             YY+FNTMLLML VF IYWWVLI SMI R+L++ G++ EDIRS 
Sbjct: 226 DIVDYLDLTLPYPTSLYYVFNTMLLMLLVFHIYWWVLIYSMIMRQLRNRGRVGEDIRSG 284

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297741277|emb|CBI32408.3| unnamed protein product [Vitis vinifera]

 Score =  127 bits (320), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 70/118 (59%), Positives = 83/118 (70%), Gaps = 14/118 (11%)

Query: 11  IGSIFLALHDASDVFMEVAKVFKYFENELGATVIFGLFAISRVILQLIFFSFRVIKCTR- 69
           IGS+ LALHDASDVFME AKVFKY E EL A+V FG FAIS ++L+LIFF F VI  +  
Sbjct: 188 IGSVVLALHDASDVFMEAAKVFKYSEKELAASVCFGFFAISWLVLRLIFFPFWVISASSY 247

Query: 70  ------------DMFIYYMFNTMLLMLFVFQIYWWVLISSMIWRRLKS-GKLREDIRS 114
                        M +YY+FNTMLL L VF IYWW+LI SMI R+LK+ G++ EDIRS
Sbjct: 248 DMQNCMNLSEAYPMLLYYVFNTMLLTLLVFHIYWWILICSMIMRQLKNRGQVGEDIRS 305

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224123486|ref|XP_002330326.1| predicted protein [Populus trichocarpa] gi|222871361|gb|EEF08492.1| predicted protein [Populus trichocarpa]

 Score =  125 bits (315), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 68/123 (55%), Positives = 87/123 (70%), Gaps = 14/123 (11%)

Query: 11  IGSIFLALHDASDVFMEVAKVFKYFENELGATVIFGLFAISRVILQLIFFSFRVIKCTR- 69
           IG+I  A+HDASDVF+E AKVFKY   EL A+++FGLFAIS VIL+L+FF F +IK T  
Sbjct: 164 IGTIICAVHDASDVFLEAAKVFKYSGKELSASILFGLFAISWVILRLVFFPFWIIKATSY 223

Query: 70  ------------DMFIYYMFNTMLLMLFVFQIYWWVLISSMIWRRLKS-GKLREDIRSAL 116
                       D  +YY+FNTMLLML VF IYWW+LI SMI R+L++ G++ EDIRS  
Sbjct: 224 ELVEFLDLSLAYDKLLYYVFNTMLLMLLVFHIYWWILIYSMIMRQLRNRGRVGEDIRSDS 283

Query: 117 KES 119
           ++ 
Sbjct: 284 EDD 286

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224105549|ref|XP_002313852.1| predicted protein [Populus trichocarpa] gi|222850260|gb|EEE87807.1| predicted protein [Populus trichocarpa]

 Score =  125 bits (313), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 70/123 (56%), Positives = 86/123 (69%), Gaps = 14/123 (11%)

Query: 11  IGSIFLALHDASDVFMEVAKVFKYFENELGATVIFGLFAISRVILQLIFFSFRVIKCTR- 69
           IG I LALHDASDVF+E AKVFKY   EL A+V FGLFA+S +IL+LIFF F VI+ T  
Sbjct: 156 IGMIILALHDASDVFLEAAKVFKYSGKELRASVFFGLFAVSWLILRLIFFPFWVIRATSY 215

Query: 70  ------------DMFIYYMFNTMLLMLFVFQIYWWVLISSMIWRRLKS-GKLREDIRSAL 116
                       D  +YY+FNTMLLML VF IYWW+LI SMI R+L++ G++ EDIRS  
Sbjct: 216 ELVKFLDLSLAYDKLVYYVFNTMLLMLLVFHIYWWILIYSMIMRQLRNRGRVGEDIRSDS 275

Query: 117 KES 119
           ++ 
Sbjct: 276 EDD 278

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|7658241|gb|AAF66103.1|AF198180_1 LAG1 homolog 2 [Arabidopsis thaliana]

 Score =  123 bits (309), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 70/123 (56%), Positives = 84/123 (68%), Gaps = 14/123 (11%)

Query: 11  IGSIFLALHDASDVFMEVAKVFKYFENELGATVIFGLFAISRVILQLIFFSFRVIKCTR- 69
           IG+I LALHDASDVFME AK+FKY E E GA+V F LFA+S ++L+LI+F F +I+ T  
Sbjct: 172 IGAIILALHDASDVFMETAKIFKYSEKEFGASVCFALFAVSWLLLRLIYFPFWIIRATSI 231

Query: 70  ------DM------FIYYMFNTMLLMLFVFQIYWWVLISSMIWRRLKS-GKLREDIRSAL 116
                 DM       +YY FNTMLLML VF IYWW LI +MI R LK+ GK+ EDIRS  
Sbjct: 232 ELLDYLDMTSAEGTLMYYSFNTMLLMLLVFHIYWWYLICAMIVRLLKNRGKVGEDIRSDY 291

Query: 117 KES 119
            E 
Sbjct: 292 SED 294

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388493182|gb|AFK34657.1| unknown [Lotus japonicus]

 Score =  122 bits (307), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 68/118 (57%), Positives = 81/118 (68%), Gaps = 14/118 (11%)

Query: 11  IGSIFLALHDASDVFMEVAKVFKYFENELGATVIFGLFAISRVILQLIFFSFRVIKCTR- 69
           IGSI LALHD SDVF+E AKVFKY   E GA+V F  FAIS +IL+LIFF F VIK T  
Sbjct: 46  IGSIILALHDGSDVFLEAAKVFKYSGREFGASVCFAFFAISWLILRLIFFPFWVIKATSI 105

Query: 70  ------------DMFIYYMFNTMLLMLFVFQIYWWVLISSMIWRRLKS-GKLREDIRS 114
                       D  +YYMFNT+L+ML +F IYWW+LI +MI R+LK+ G + EDIRS
Sbjct: 106 DLQKVLNLSQSCDTLLYYMFNTLLIMLLIFHIYWWMLICAMISRQLKNRGTVGEDIRS 163

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	119
TAIR|locus:2094133	296	LOH2 "LAG1 homologue 2" [Arabi	0.873	0.351	0.584	1.3e-27
TAIR|locus:2094528	310	LAG1 "AT3G25540" [Arabidopsis	0.865	0.332	0.449	2.5e-19
TAIR|locus:2010022	308	LAG13 "LAG1 longevity assuranc	0.873	0.337	0.441	1.7e-18
TAIR|locus:2028771	312	AT1G26200 "AT1G26200" [Arabido	0.487	0.185	0.448	1.3e-16
RGD|1309303	393	Cers4 "ceramide synthase 4" [R	0.915	0.277	0.376	1e-13
MGI|MGI:1914510	393	Cers4 "ceramide synthase 4" [M	0.907	0.274	0.362	2.8e-13
UNIPROTKB|D0G774	393	LASS4 "Ceramide synthase 4" [S	0.915	0.277	0.358	7.6e-13
UNIPROTKB|E2RCC6	393	CERS4 "Uncharacterized protein	0.915	0.277	0.341	2.7e-12
FB|FBgn0040918	400	schlank "schlank" [Drosophila	0.899	0.267	0.344	3.6e-12
UNIPROTKB|H0YKC9	343	CERS4 "Ceramide synthase 4" [H	0.915	0.317	0.316	5.2e-12

TAIR|locus:2094133 LOH2 "LAG1 homologue 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 309 (113.8 bits), Expect = 1.3e-27, P = 1.3e-27
 Identities = 69/118 (58%), Positives = 83/118 (70%)

Query:    11 IGSIFLALHDASDVFMEVAKVFKYFENELGATVIFGLFAISRVILQLIFFSFRVIKCTR- 69
             IG+I LALHDASDVFME AK+FKY E E GA+V F LFA+S ++L+LI+F F +I+ T  
Sbjct:   172 IGAIILALHDASDVFMETAKIFKYSEKEFGASVCFALFAVSWLLLRLIYFPFWIIRATSI 231

Query:    70 ------DM------FIYYMFNTMLLMLFVFQIYWWVLISSMIWRRLKS-GKLREDIRS 114
                   DM       +YY FNTMLLML VF IYWW LI +MI R LK+ GK+ EDIRS
Sbjct:   232 ELLDYLDMTSAEGTLMYYSFNTMLLMLLVFHIYWWYLICAMIVRLLKNRGKVGEDIRS 289

GO:0016021 "integral to membrane" evidence=IEA

GO:0005886 "plasma membrane" evidence=IDA

GO:0005783 "endoplasmic reticulum" evidence=IDA

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0002238 "response to molecule of fungal origin" evidence=IMP

GO:0042759 "long-chain fatty acid biosynthetic process" evidence=IMP

GO:0050291 "sphingosine N-acyltransferase activity" evidence=IMP

GO:0016126 "sterol biosynthetic process" evidence=RCA

GO:0046520 "sphingoid biosynthetic process" evidence=RCA

TAIR|locus:2094528 LAG1 "AT3G25540" [Arabidopsis thaliana (taxid:3702)]

 Score = 231 (86.4 bits), Expect = 2.5e-19, P = 2.5e-19
 Identities = 53/118 (44%), Positives = 74/118 (62%)

Query:    12 GSIFLALHDASDVFMEVAKVFKYFENELGATVIFGLFAISRVILQLIFFSFRVIKCTRDM 71
             GS+ LALHDASDVF+E+ K+ KY   E  A++ F LFA+S V+L+LI++ F ++  T   
Sbjct:   183 GSVILALHDASDVFLEIGKMSKYCGAESLASISFVLFALSWVVLRLIYYPFWILWSTSYQ 242

Query:    72 FI--------------YYMFNTMLLMLFVFQIYWWVLISSMIWRRLKS-GKLREDIRS 114
              I              YYMFNT+L  L V  I+WWVLI  M+ ++++  GKL ED+RS
Sbjct:   243 IIMTVDKEKHPNGPILYYMFNTLLYFLLVLHIFWWVLIYRMLVKQVQDRGKLSEDVRS 300

GO:0003674 "molecular_function" evidence=ND

GO:0016021 "integral to membrane" evidence=IEA

GO:0005886 "plasma membrane" evidence=IDA

GO:0005783 "endoplasmic reticulum" evidence=IDA

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0016126 "sterol biosynthetic process" evidence=RCA

GO:0046520 "sphingoid biosynthetic process" evidence=RCA

TAIR|locus:2010022 LAG13 "LAG1 longevity assurance homolog 3" [Arabidopsis thaliana (taxid:3702)]

 Score = 223 (83.6 bits), Expect = 1.7e-18, P = 1.7e-18
 Identities = 53/120 (44%), Positives = 74/120 (61%)

Query:    11 IGSIFLALHDASDVFMEVAKVFKYFENELGATVIFGLFAISRVILQLIFFSFRVIKCT-- 68
             +GS+ LALHDASDVF+EV K+ KY   E  A+  F LF +S +IL+LI++ F ++  T  
Sbjct:   179 VGSVVLALHDASDVFLEVGKMSKYSGAERIASFSFILFVLSWIILRLIYYPFWILWSTSY 238

Query:    69 -------RDM------FIYYMFNTMLLMLFVFQIYWWVLISSMIWRRLKS-GKLREDIRS 114
                    +D         YYMFNT+L  L V  IYWWVL+  M+ ++++  GKL ED+RS
Sbjct:   239 EVVLELDKDKHPIEGPIYYYMFNTLLYCLLVLHIYWWVLMYRMLVKQIQDRGKLSEDVRS 298

GO:0016021 "integral to membrane" evidence=IEA

GO:0005783 "endoplasmic reticulum" evidence=IDA

GO:0042761 "very long-chain fatty acid biosynthetic process" evidence=IGI

GO:0050291 "sphingosine N-acyltransferase activity" evidence=IGI

GO:0016126 "sterol biosynthetic process" evidence=RCA

GO:0046520 "sphingoid biosynthetic process" evidence=RCA

TAIR|locus:2028771 AT1G26200 "AT1G26200" [Arabidopsis thaliana (taxid:3702)]

 Score = 122 (48.0 bits), Expect = 1.3e-16, Sum P(2) = 1.3e-16
 Identities = 26/58 (44%), Positives = 38/58 (65%)

Query:    11 IGSIFLALHDASDVFMEVAKVFKYFENELGATVIFGLFAISRVILQLIFFSFRVIKCT 68
             IGS+ LALH+ SDVF+E+ K+ KY   E   +V F LF +S   L+LI++ F ++  T
Sbjct:   175 IGSVILALHEISDVFLEIGKMCKYSGAETMTSVSFVLFFLSWTTLRLIYYPFWILWST 232

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0016021 "integral to membrane" evidence=IEA

RGD|1309303 Cers4 "ceramide synthase 4" [Rattus norvegicus (taxid:10116)]

 Score = 184 (69.8 bits), Expect = 1.0e-13, P = 1.0e-13
 Identities = 44/117 (37%), Positives = 64/117 (54%)

Query:    11 IGSIFLALHDASDVFMEVAKVFKYFENELGATVIFGLFAISRVILQLIFFSFRVI----- 65
             IGS+ L LHD SD  +E  K+  Y   + G   +F +F++     +L+FF   VI     
Sbjct:   231 IGSVVLLLHDCSDYLLEGCKMLNYAHFQRGCDTLFIIFSLVFFYTRLVFFPTEVIYTAVF 290

Query:    66 ---KCTRDMFIYYMFNTMLLMLFVFQIYWWVLISSMIWRRLKSGKLREDIRSALKES 119
                K +   F YY F  +L ML +  +YW+ LI  MI   L+ G++REDIRS ++ES
Sbjct:   291 DSIKNSGPFFGYYFFIVLLGMLQILHVYWFCLILRMICSFLRKGQMREDIRSDVEES 347

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0005783 "endoplasmic reticulum" evidence=IEA;ISO

GO:0016021 "integral to membrane" evidence=IEA

GO:0030148 "sphingolipid biosynthetic process" evidence=ISO

GO:0043565 "sequence-specific DNA binding" evidence=IEA

GO:0046513 "ceramide biosynthetic process" evidence=IEA;ISO

GO:0050291 "sphingosine N-acyltransferase activity" evidence=IEA;ISO

MGI|MGI:1914510 Cers4 "ceramide synthase 4" [Mus musculus (taxid:10090)]

 Score = 180 (68.4 bits), Expect = 2.8e-13, P = 2.8e-13
 Identities = 42/116 (36%), Positives = 63/116 (54%)

Query:    11 IGSIFLALHDASDVFMEVAKVFKYFENELGATVIFGLFAISRVILQLIFFSFRVI----- 65
             IG++ L LHD SD  +E  K+  Y     G   +F +FA+     +LIFF  +VI     
Sbjct:   231 IGAVVLLLHDCSDYLLEGCKILNYAHFRRGCDALFIMFALVFFYTRLIFFPTQVIYTSVY 290

Query:    66 ---KCTRDMFIYYMFNTMLLMLFVFQIYWWVLISSMIWRRLKSGKLREDIRSALKE 118
                K +   F YY F  +L+ML +  +YW+ LI  M++  L  G++ EDIRS ++E
Sbjct:   291 DSIKNSGPFFGYYFFIVLLVMLQILHVYWFCLILRMLYSFLHKGQMTEDIRSDVEE 346

GO:0003677 "DNA binding" evidence=IEA

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0005783 "endoplasmic reticulum" evidence=IDA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0006629 "lipid metabolic process" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0030148 "sphingolipid biosynthetic process" evidence=IDA

GO:0043565 "sequence-specific DNA binding" evidence=IEA

GO:0046513 "ceramide biosynthetic process" evidence=IDA

GO:0050291 "sphingosine N-acyltransferase activity" evidence=IDA

UNIPROTKB|D0G774 LASS4 "Ceramide synthase 4" [Sus scrofa (taxid:9823)]

 Score = 176 (67.0 bits), Expect = 7.6e-13, P = 7.6e-13
 Identities = 42/117 (35%), Positives = 70/117 (59%)

Query:    11 IGSIFLALHDASDVFMEVAKVFKY--FENELGAT-VIFGL-FAISRVIL---QLIFFSF- 62
             IGS+ L LHD+SD  +E  K+F Y  +     A  +IF L F  +R++L   Q+++ ++ 
Sbjct:   231 IGSLVLLLHDSSDYLLEACKLFNYTHWRRVCDALFIIFSLVFFYTRLVLFPTQILYTTYY 290

Query:    63 RVIKCTRDMFIYYMFNTMLLMLFVFQIYWWVLISSMIWRRLKSGKLREDIRSALKES 119
               I  +   F YY FN +L++L +  ++W  LI  MI+  +K G++ +DIRS ++ES
Sbjct:   291 ESIAQSGPFFGYYFFNALLMLLQLLHVFWSCLILRMIYHFMKKGQMEKDIRSDVEES 347

GO:0005634 "nucleus" evidence=IEA

GO:0050291 "sphingosine N-acyltransferase activity" evidence=IEA

GO:0046513 "ceramide biosynthetic process" evidence=IEA

GO:0005783 "endoplasmic reticulum" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0043565 "sequence-specific DNA binding" evidence=IEA

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA

UNIPROTKB|E2RCC6 CERS4 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 171 (65.3 bits), Expect = 2.7e-12, P = 2.7e-12
 Identities = 40/117 (34%), Positives = 64/117 (54%)

Query:    11 IGSIFLALHDASDVFMEVAKVFKYFENELGATVIFGLFAISRVILQLIFFSFRVIKCTR- 69
             IGS+ L LHDASD  +E  K+F Y         +F +F++     +L+ F  R++  T  
Sbjct:   231 IGSLVLLLHDASDYLLEAGKMFNYTPWRKVCDTLFIVFSLVFFYTRLVLFPTRILYTTYY 290

Query:    70 ------DMFI-YYMFNTMLLMLFVFQIYWWVLISSMIWRRLKSGKLREDIRSALKES 119
                   D F  YY  NT+L+ L +  ++W  LI  MI+  +K G++ +D+RS ++ES
Sbjct:   291 DSIAQWDTFFGYYFCNTLLMALQLLHVFWSCLILRMIYSFVKKGRMEKDVRSDVEES 347

GO:0005634 "nucleus" evidence=IEA

GO:0050291 "sphingosine N-acyltransferase activity" evidence=IEA

GO:0046513 "ceramide biosynthetic process" evidence=IEA

GO:0005783 "endoplasmic reticulum" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0043565 "sequence-specific DNA binding" evidence=IEA

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA

FB|FBgn0040918 schlank "schlank" [Drosophila melanogaster (taxid:7227)]

 Score = 170 (64.9 bits), Expect = 3.6e-12, P = 3.6e-12
 Identities = 40/116 (34%), Positives = 67/116 (57%)

Query:    11 IGSIFLALHDASDVFMEVAKVFKYFENELGATVIFGLFAISRVILQLIFFSFRVI----- 65
             +GS+ L +HD +D+F+E AK+ KY + +     IF +F +  ++ +L F+  R+I     
Sbjct:   234 VGSLVLVVHDCADIFLEAAKLTKYAKYQKLCDAIFAIFTVVWIVTRLGFYP-RIIYSSSV 292

Query:    66 KCTR--DMF-IYYMFNTMLLMLFVFQIYWWVLISSMIWRRLKSGKLREDIRSALKE 118
             +  R   MF  YY+FN++LLML V  + W  +I  ++   L+ G +  DIRS+  E
Sbjct:   293 EAPRILPMFPAYYIFNSLLLMLLVLHVIWTYMILKIVVDSLQKGLMSGDIRSSDSE 348

GO:0005886 "plasma membrane" evidence=ISS

GO:0016021 "integral to membrane" evidence=IEA

GO:0043565 "sequence-specific DNA binding" evidence=IEA

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA

GO:0006641 "triglyceride metabolic process" evidence=IMP

GO:0046889 "positive regulation of lipid biosynthetic process" evidence=IMP

GO:0050995 "negative regulation of lipid catabolic process" evidence=IMP

GO:0032933 "SREBP signaling pathway" evidence=IMP

GO:0046513 "ceramide biosynthetic process" evidence=IMP

UNIPROTKB|H0YKC9 CERS4 "Ceramide synthase 4" [Homo sapiens (taxid:9606)]

 Score = 167 (63.8 bits), Expect = 5.2e-12, P = 5.2e-12
 Identities = 37/117 (31%), Positives = 65/117 (55%)

Query:    11 IGSIFLALHDASDVFMEVAKVFKYFENELGATVIFGLFAISRVILQLIFFSFRVIKCT-- 68
             IGS+ L LHD+SD  +E  K+  Y + +     +F +F+      +L+ F  +++  T  
Sbjct:   180 IGSLVLLLHDSSDYLLEACKMVNYMQYQQVCDALFLIFSFVFFYTRLVLFPTQILYTTYY 239

Query:    69 -----RDMFI-YYMFNTMLLMLFVFQIYWWVLISSMIWRRLKSGKLREDIRSALKES 119
                  R  F  YY FN +L++L +  ++W  LI  M++  +K G++ +DIRS ++ES
Sbjct:   240 ESISNRGPFFGYYFFNGLLMLLQLLHVFWSCLILRMLYSFMKKGQMEKDIRSDVEES 296

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA

GO:0043565 "sequence-specific DNA binding" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0005783 "endoplasmic reticulum" evidence=IEA

GO:0046513 "ceramide biosynthetic process" evidence=IEA

GO:0050291 "sphingosine N-acyltransferase activity" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: GSVIVG00036598001 SubName- Full=Chromosome chr3 scaffold_8, whole genome shotgun sequence; (288 aa) (Vitis vinifera)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	119
smart00724	205	smart00724, TLC, TRAM, LAG1 and CLN8 homology doma	2e-10
pfam03798	198	pfam03798, TRAM_LAG1_CLN8, TLC domain	4e-10

>gnl|CDD|214789 smart00724, TLC, TRAM, LAG1 and CLN8 homology domains

 Score = 55.4 bits (134), Expect = 2e-10
 Identities = 33/112 (29%), Positives = 51/112 (45%), Gaps = 12/112 (10%)

Query: 5   FLKRCIIGSIFLALHDASDVFMEVAKVFKY--FENELGATVIFGLFAISRVILQLIFFSF 62
            L    +G + L LH+ SD F+ + K+  Y   +  L   V F LFA+   + +LI F F
Sbjct: 94  VLNFTRLGLLLLLLHELSDPFLHLRKLLNYAGRKKSLLYDVNFVLFAVVFFVFRLILFPF 153

Query: 63  RVIKCTRDM----------FIYYMFNTMLLMLFVFQIYWWVLISSMIWRRLK 104
            ++  T              +Y +F  +LL L +  IYW+ LI  M  + L 
Sbjct: 154 LILTVTVHYAQAESGLFPPLLYLLFLLLLLCLQLLNIYWFFLILRMARKLLS 205

Protein domain with at least 5 transmembrane alpha-helices. Lag1p and Lac1p are essential for acyl-CoA-dependent ceramide synthesis, TRAM is a subunit of the translocon and the CLN8 gene is mutated in Northern epilepsy syndrome. The family may possess multiple functions such as lipid trafficking, metabolism, or sensing. Trh homologues possess additional homeobox domains. Length = 205

>gnl|CDD|217735 pfam03798, TRAM_LAG1_CLN8, TLC domain

 Score = 54.2 bits (131), Expect = 4e-10
 Identities = 29/101 (28%), Positives = 49/101 (48%), Gaps = 10/101 (9%)

Query: 5   FLKRCIIGSIFLALHDASDVFMEVAKVFKYFENELGATVIFGLFAISRVILQLIFFSFRV 64
           F     +G + L LH+ SD F+ + K   Y   +    V+F LF +S  +++L+   F +
Sbjct: 96  FYNFTRVGLLVLLLHELSDPFLHLRKFLNYLGKKKSCDVLFVLFLVSFFLVRLVLGPFLI 155

Query: 65  IKCTRDMF----------IYYMFNTMLLMLFVFQIYWWVLI 95
           +    D            +YY+F  +LL+L +  IYW+ LI
Sbjct: 156 LLSILDEARLDIPGGPFNLYYIFLALLLVLQLLNIYWFYLI 196

Length = 198

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	119
KOG1607	318	consensus Protein transporter of the TRAM (translo	100.0
COG5058	395	LAG1 Protein transporter of the TRAM (translocatin	99.96
smart00724	205	TLC TRAM, LAG1 and CLN8 homology domains. Protein	99.81
PF03798	198	TRAM_LAG1_CLN8: TLC domain; InterPro: IPR006634 TL	99.63
KOG4561	281	consensus Uncharacterized conserved protein, conta	97.74
KOG1608	374	consensus Protein transporter of the TRAM (translo	90.25

>KOG1607 consensus Protein transporter of the TRAM (translocating chain-associating membrane) superfamily [Intracellular trafficking, secretion, and vesicular transport]

Probab=100.00  E-value=1.9e-38  Score=251.99  Aligned_cols=118  Identities=39%  Similarity=0.700  Sum_probs=113.6

Q ss_pred             eeeeccCcccceeeEEecccchhhHhHHHHhhhhcCchhhHHHHHHHHHHHHHHHHHHhhhhhhhccc----------ch
Q 043282            2 INIFLKRCIIGSIFLALHDASDVFMEVAKVFKYFENELGATVIFGLFAISRVILQLIFFSFRVIKCTR----------DM   71 (119)
Q Consensus         2 ~Sy~~n~~riG~lVl~lHD~sDi~L~~aK~~~y~~~~~~~~~~F~~f~~~w~~~Rl~~~p~~vl~~~~----------~~   71 (119)
                      +||..||+|+|++|+++||+||++||++|++||.+.+.+++.+|++|+.+|+++||+.+|+|+++++.          ++
T Consensus       178 lSy~~~f~R~G~lil~lhD~SD~~Le~~K~~nY~~~~~~~~~~F~~F~~~wi~~RL~~~p~wil~st~~~~~~~~~~~~~  257 (318)
T KOG1607|consen  178 LSYVFNFTRVGTLILALHDASDVFLELGKMLNYLQFEAIADFVFVLFAFSWIYTRLIYYPFWILRSTSREDFSLRQYQPK  257 (318)
T ss_pred             HHHHhhhhcccceeeeeecchHHHHHHHHHHchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHhhccCCC
Confidence            59999999999999999999999999999999999999999999999999999999999999999998          46


Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccCccccCC
Q 043282           72 FIYYMFNTMLLMLFVFQIYWWVLISSMIWRRLKSGKLREDIRSALKES  119 (119)
Q Consensus        72 ~~~~~~~~lL~~L~~LhiyWf~lIlki~~~~~~~g~~~~D~Rsd~e~~  119 (119)
                      |.++++|++|.+||+||+||+++|+||++|++++|+..||+|||+|||
T Consensus       258 ~~~~~~~~lL~~Lqll~i~W~~lI~rm~~r~~~~g~~~eD~Rsd~~s~  305 (318)
T KOG1607|consen  258 PSYYFFNCLLLALQLLHIYWFYLILRMAYRVIKRGMQGEDIRSDSESE  305 (318)
T ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccccccc
Confidence            899999999999999999999999999999998788899999998765

>COG5058 LAG1 Protein transporter of the TRAM (translocating chain-associating membrane) superfamily, longevity assurance factor [Intracellular trafficking and secretion]

Probab=99.96  E-value=3.5e-30  Score=204.71  Aligned_cols=115  Identities=22%  Similarity=0.360  Sum_probs=104.4

Q ss_pred             eeeeccCcccceeeEEecccchhhHhHHHHhhhhcCchhhHHHHHHHHHHHHHHHHHHhhhhhhhccc------------
Q 043282            2 INIFLKRCIIGSIFLALHDASDVFMEVAKVFKYFENELGATVIFGLFAISRVILQLIFFSFRVIKCTR------------   69 (119)
Q Consensus         2 ~Sy~~n~~riG~lVl~lHD~sDi~L~~aK~~~y~~~~~~~~~~F~~f~~~w~~~Rl~~~p~~vl~~~~------------   69 (119)
                      .||..||+|+|..|..+||+||++|+.+|++||++. .+++..|++|+.+|+++|+++.. .++++++            
T Consensus       249 lSY~fhftr~GlAI~itmDvSD~~Ls~sK~lnYl~~-~l~~~iF~iFv~~wIysRHyln~-kIlw~vlt~~r~~g~~~L~  326 (395)
T COG5058         249 LSYVFHFTRMGLAIYITMDVSDFFLSLSKTLNYLNS-VLATFIFGIFVFIWIYSRHYLNL-KILWSVLTAFRTIGNFVLD  326 (395)
T ss_pred             HHHHHHHHhccceEEEEEeccHHHHHHHHHHHHhhc-hhHHHHHHHHHHHHHHHHHHHHH-HHHHHHHhchhhcCceeeE
Confidence            589999999999999999999999999999999999 88999999999999999999855 7887776            


Q ss_pred             -------chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccCccccCC
Q 043282           70 -------DMFIYYMFNTMLLMLFVFQIYWWVLISSMIWRRLKSGKLREDIRSALKES  119 (119)
Q Consensus        70 -------~~~~~~~~~~lL~~L~~LhiyWf~lIlki~~~~~~~g~~~~D~Rsd~e~~  119 (119)
                             ..|.+.++..||.+||.+|+||+.||+||++|++.+|+ .+|.|||||||
T Consensus       327 va~~qykcwisl~i~~iLl~aLQlvniyWl~lIvRvayRv~~~~e-~~D~RSd~e~e  382 (395)
T COG5058         327 VATQQYKCWISLPIVFILLQALQLVNIYWLFLIVRVAYRVIWEGE-LKDERSDDESE  382 (395)
T ss_pred             eechhhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc-ccccccccccC
Confidence                   13567778889999999999999999999999996665 99999998775

>smart00724 TLC TRAM, LAG1 and CLN8 homology domains

Probab=99.81  E-value=5.3e-20  Score=136.25  Aligned_cols=102  Identities=32%  Similarity=0.591  Sum_probs=92.0

Q ss_pred             eeeeccCcccceeeEEecccchhhHhHHHHhhhhcCc--hhhHHHHHHHHHHHHHHHHHHhhhhhhhccc----------
Q 043282            2 INIFLKRCIIGSIFLALHDASDVFMEVAKVFKYFENE--LGATVIFGLFAISRVILQLIFFSFRVIKCTR----------   69 (119)
Q Consensus         2 ~Sy~~n~~riG~lVl~lHD~sDi~L~~aK~~~y~~~~--~~~~~~F~~f~~~w~~~Rl~~~p~~vl~~~~----------   69 (119)
                      .||..|++|.|.+++++||+||+|++.+|+++++|.+  ++.+..+++|+++|+++|++.+|..+..+..          
T Consensus        91 ~~~~~~~~~~~~~~~~l~E~s~~fl~~~~~l~~~~~~~~~~~~~~~~~f~~~f~~~R~~~~p~~~~~~~~~~~~~~~~~~  170 (205)
T smart00724       91 LSYVLNFTRLGLLLLLLHELSDPFLHLRKLLNYAGRKKSLLYDVNFVLFAVVFFVFRLILFPFLILTVTVHYAQAESGLF  170 (205)
T ss_pred             HHHHhhhhHHHHHHHHHHhhhHHHHHHHHHHHHhccccchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhcCCC
Confidence            4788899999999999999999999999999999984  7889999999999999999999987776665          


Q ss_pred             chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 043282           70 DMFIYYMFNTMLLMLFVFQIYWWVLISSMIWRRL  103 (119)
Q Consensus        70 ~~~~~~~~~~lL~~L~~LhiyWf~lIlki~~~~~  103 (119)
                      +++.+..+.+++.+|++||+||+++|+|++.|..
T Consensus       171 ~~~~~~~~~~~~~~l~~ln~~Wf~~i~~~~~~~~  204 (205)
T smart00724      171 PPLLYLLFLLLLLCLQLLNIYWFFLILRMARKLL  204 (205)
T ss_pred             CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            2455778889999999999999999999999875

Protein domain with at least 5 transmembrane alpha-helices. Lag1p and Lac1p are essential for acyl-CoA-dependent ceramide synthesis, TRAM is a subunit of the translocon and the CLN8 gene is mutated in Northern epilepsy syndrome. The family may possess multiple functions such as lipid trafficking, metabolism, or sensing. Trh homologues possess additional homeobox domains.

>PF03798 TRAM_LAG1_CLN8: TLC domain; InterPro: IPR006634 TLC is a protein domain with at least 5 transmembrane alpha-helices

Probab=99.63  E-value=2.7e-16  Score=114.39  Aligned_cols=96  Identities=25%  Similarity=0.515  Sum_probs=84.2

Q ss_pred             eeeeccCcccceeeEEecccchhhHhHHHHhhhh-cC-chhhHHHH--HHHHHHHHHHHHHHhhhhhhhccc--------
Q 043282            2 INIFLKRCIIGSIFLALHDASDVFMEVAKVFKYF-EN-ELGATVIF--GLFAISRVILQLIFFSFRVIKCTR--------   69 (119)
Q Consensus         2 ~Sy~~n~~riG~lVl~lHD~sDi~L~~aK~~~y~-~~-~~~~~~~F--~~f~~~w~~~Rl~~~p~~vl~~~~--------   69 (119)
                      .|+..|..|.|..++++||+|||||+.+|++++. +. ++.....+  ++|+++|+.+|++.+|..+.+...        
T Consensus        89 ~~~~~~~~~~~~~~~ll~E~st~fl~~r~~l~~~~~~~~~~~~~~~~~~~f~~~f~~~Ri~~~~~~~~~~~~~~~~~~~~  168 (198)
T PF03798_consen   89 FSYFYNFGRFGIVVFLLHEISTPFLNLRWFLKYLGGYSKKSSLYRFNGVLFAVTFFVFRIVLFPYLIYWVYWDVWPLPLW  168 (198)
T ss_pred             HhhHHHHhhHHHHHHHHHhcccHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccc
Confidence            4677899999999999999999999999999999 55 56678888  999999999999999977666655        


Q ss_pred             --chhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 043282           70 --DMFIYYMFNTMLLMLFVFQIYWWVLISS   97 (119)
Q Consensus        70 --~~~~~~~~~~lL~~L~~LhiyWf~lIlk   97 (119)
                        +++....+.+++.+|++||+||+++|+|
T Consensus       169 ~~~~~~~~~~~~~~~~l~~Ln~~W~~~i~r  198 (198)
T PF03798_consen  169 KVPWPVPWIFLVLLLVLFVLNIYWFYLILR  198 (198)
T ss_pred             ccchHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence              1466778889999999999999999986

Lag1p and Lac1p are essential for acyl-CoA-dependent ceramide synthesis [], TRAM is a subunit of the translocon and the CLN8 gene is mutated in Northern epilepsy syndrome. Proteins containing this domain may possess multiple functions such as lipid trafficking, metabolism, or sensing. Trh homologues possess additional homeobox domains [].; GO: 0016021 integral to membrane

>KOG4561 consensus Uncharacterized conserved protein, contains TBC domain [Signal transduction mechanisms; General function prediction only]

Probab=97.74  E-value=0.00021  Score=56.75  Aligned_cols=89  Identities=13%  Similarity=0.196  Sum_probs=61.3

Q ss_pred             ecccchhhHhHHHHhhhhcCch-hh-HHHHHHHHHHHHHHHHHHhhhhhhhccc-----------chhHHHHHHHHHHHH
Q 043282           18 LHDASDVFMEVAKVFKYFENEL-GA-TVIFGLFAISRVILQLIFFSFRVIKCTR-----------DMFIYYMFNTMLLML   84 (119)
Q Consensus        18 lHD~sDi~L~~aK~~~y~~~~~-~~-~~~F~~f~~~w~~~Rl~~~p~~vl~~~~-----------~~~~~~~~~~lL~~L   84 (119)
                      +--.|-+|+...+.+--+|.++ .. .+==.+..++|+..|+..+|+. -+..+           |+......++.=.+|
T Consensus       170 ~~ElSTPFvnlrw~L~~~~~k~Sl~~~vNG~lm~~~F~v~RIll~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~L  248 (281)
T KOG4561|consen  170 MAELSTPFVNLRWFLDKAGQKKSLFYKVNGLLLLVVFFVARILLWPYM-GWHYYWRYQGLVLNQVPPFLPLFLLGLNALL  248 (281)
T ss_pred             eeecCCceeeHHHHHHHcCcccchHHHhhhHHHHHHHHHHHHHHHHHH-HHHHHHHHhhhhhhhhchhHhHHHHHHHHHH
Confidence            3455666777776666666654 11 1122367889999999988843 32222           334455556667789


Q ss_pred             HHHHHHHHHHHHHHHHHHHhcCC
Q 043282           85 FVFQIYWWVLISSMIWRRLKSGK  107 (119)
Q Consensus        85 ~~LhiyWf~lIlki~~~~~~~g~  107 (119)
                      .++|+|||..|.|.+.|.+.+++
T Consensus       249 ~v~Nl~Wf~km~~ga~K~~~~~~  271 (281)
T KOG4561|consen  249 LVLNLYWFSKMVRGALKVLKKAK  271 (281)
T ss_pred             HhhHHHHHHHHHHHHHHhcCccc
Confidence            99999999999999999997665

>KOG1608 consensus Protein transporter of the TRAM (translocating chain-associating membrane) superfamily [Intracellular trafficking, secretion, and vesicular transport]

Probab=90.25  E-value=0.27  Score=39.95  Aligned_cols=61  Identities=21%  Similarity=0.355  Sum_probs=53.7

Q ss_pred             eeeeccCcccceeeEEecccchhhHhHHHHhhhhcCchhhHHHHHHHHHHHHHHHHHHhhhhh
Q 043282            2 INIFLKRCIIGSIFLALHDASDVFMEVAKVFKYFENELGATVIFGLFAISRVILQLIFFSFRV   64 (119)
Q Consensus         2 ~Sy~~n~~riG~lVl~lHD~sDi~L~~aK~~~y~~~~~~~~~~F~~f~~~w~~~Rl~~~p~~v   64 (119)
                      ..|..|+.|.|.+.+.+|=++..+-++++.+...+.+  .+-.|.+++.+|+..|+...-.-|
T Consensus       209 gAYllnl~rlgLvLl~LhYftellfHi~rlfyf~dek--~~k~fslwa~vF~l~Rl~tliiaV  269 (374)
T KOG1608|consen  209 GAYLLNLNRLGLVLLTLHYFTELLFHIARLFYFSDEK--YQKLFSLWAAVFVLGRLGTLIIAV  269 (374)
T ss_pred             HHHHHhhHHHHHHHHHHHHHHHHHHHHHHHheecccc--hhHHHHHHHHHHHHHHHHHHHHHH
Confidence            4688999999999999999999999999999988876  467999999999999998755433

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00