Citrus Sinensis ID: 043307

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------25
Protein Sequence
MEASPELQLQTRVNDRELDSHIDTSVNQQWRFLKLKHYKWWLRVILYVVCLLVGQSAATLLGRLYYDKGGNSKWMATFVQSAGFPILLPVLCCFSNGSRSTNKTDPKISTLVCLYVAFGLLLTGDNMMYSYGLLYLPLSTYSLLCATQLAFNAFFSFFLNSQKFTPFIFNSLVLLTISATLLAVNADSENTSGVSKGNYVIGFLCTLGASATYSLYLSLLQLSFEKVIKKETFSVVMDMQIYSSFVAT
Secondary Structure (PSIPRED)
cccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHccHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHccccccccccccccccEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHcc
Secondary Structure Prediction (SSPRO)
ccccccEEEEccccccHccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHcccccEHHHHHcccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHcc
Coil and Loop (DISEMBL)
measpelqlqtrvndreldshidTSVNQQWRFLKLKHYKWWLRVILYVVCLLVGQSAATLLGRLyydkggnskWMATFVQsagfpillpvlccfsngsrstnktdpkisTLVCLYVAFGLLLTGDNMMYSYGLLYLPLSTYSLLCATQLAFNAFFSFflnsqkftpfIFNSLVLLTISATLLAVnadsentsgvskgnYVIGFLCTLGASATYSLYLSLLQLSFEKVIKKETFSVVMDMQIYSSFVAT
Flexible Loop (DISEMBL)
measpelqlqtrvndreldshidTSVNQQWRFLKLKHYKWWLRVILYVVCLLVGQSAATLLGRLYYDKGGNSKWMATFVQSAGFPILLPVLCCFSNGSrstnktdpkisTLVCLYVAFGLLLTGDNMMYSYGLLYLPLSTYSLLCATQLAFNAFFSFFLNSQKFTPFIFNSLVLLTISATLLAVNADsentsgvskgNYVIGFLCTLGASATYSLYLSLLQLSFEKVIKKETFSVVMDMQIYSSFVAT
Low Complexity Region (SEG)
MEASPELQLQTRVNDRELDSHIDTSVNQQWRFLKLKHYKWWLRVILYVVCLLVGQSAATLLGRLYYDKGGNSKWMATFVQSAGFPILLPVLCCFSNGSRSTNKTDPKISTLVCLYVAFGLLLTGDNMMysygllylplstysllCATqlafnaffsfflnsqKFTPFIFNSLVLLTISATLLAVNADSENTSGVSKGNYVIGFLCTlgasatyslylsllqlsFEKVIKKETFSVVMDMQIYSSFVAT
Disordered region (IsUnstruct)
*********************IDTSVNQQWRFLKLKHYKWWLRVILYVVCLLVGQSAATLLGRLYYDKGGNSKWMATFVQSAGFPILLPVLCCFSNG*******DPKISTLVCLYVAFGLLLTGDNMMYSYGLLYLPLSTYSLLCATQLAFNAFFSFFLNSQKFTPFIFNSLVLLTISATLLAVNADSENTSGVSKGNYVIGFLCTLGASATYSLYLSLLQLSFEKVIKKETFSVVMDMQIYSSF***
Disordered Region (DISOPRED)
****************************************WLRVILYVVCLLVGQSAATLLGRLYYDKGGNSKWMATFVQSAGFPILLPVLCCFS************ISTLVCLYVAFGLLLTGDNMMYSYGLLYLPLSTYSLLCATQLAFNAFFSFFLNSQKFTPFIFNSLVLLTISATL******************VIGFLCTLGASATYSLYLSLLQLSFEKVIKKETFSVVMDMQIYSSFVAT
Disordered Region (DISEMBL)
********LQTRVNDRELDSHIDTSVNQQWRFLKLKHYKWWLRVILYVVCLLVGQSAATLLGRLYYDKGGNSKWMATFVQSAGFPILLPVLCCFSNGSRSTNKTDPKISTLVCLYVAFGLLLTGDNMMYSYGLLYLPLSTYSLLCATQLAFNAFFSFFLNSQKFTPFIFNSLVLLTISATLLAVNADSENTSGVSKGNYVIGFLCTLGASATYSLYLSLLQLSFEKVIKKETFSVVMDMQIYSSFVAT
Disordered Region (DISPRO)
**********************************LKHYKWWLRVILYVVCLLVGQSAATLLGRLYYDKGGNSKWMATFVQSAGFPILLPVLCCFSNGSRSTNKTDPKISTLVCLYVAFGLLLTGDNMMYSYGLLYLPLSTYSLLCATQLAFNAFFSFFLNSQKFTPFIFNSLVLLTISATLLAVNADSEN**GVSKGNYVIGFLCTLGASATYSLYLSLLQLSFEKVIKKETFSVVMDMQIYSSFVAT
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooHHHHHHHHHHHHHHHHHHHHiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiHHHHHHHHHHHHHHHHHHHHoo
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHHiiiiiiiHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHooo
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MEASPELQLQTRVNDRELDSHIDTSVNQQWRFLKLKHYKWWLRVILYVVCLLVGQSAATLLGRLYYDKGGNSKWMATFVQSAGFPILLPVLCCFSNGSRSTNKTDPKISTLVCLYVAFGLLLTGDNMMYSYGLLYLPLSTYSLLCATQLAFNAFFSFFLNSQKFTPFIFNSLVLLTISATLLAVNADSENTSGVSKGNYVIGFLCTLGASATYSLYLSLLQLSFEKVIKKETFSVVMDMQIYSSFVAT
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	248	2.2.26 [Sep-21-2011]
O49726	390	Probable purine permease	yes	no	0.995	0.633	0.503	3e-61
O49725	390	Probable purine permease	yes	no	0.987	0.628	0.523	2e-59
Q9LPF6	379	Probable purine permease	no	no	0.875	0.572	0.564	1e-56
O49722	387	Probable purine permease	no	no	0.935	0.599	0.466	1e-54
Q8RY74	377	Probable purine permease	no	no	0.939	0.618	0.483	9e-54
Q8RY83	361	Probable purine permease	no	no	0.891	0.612	0.502	3e-53
Q0WRB9	394	Probable purine permease	no	no	0.850	0.535	0.538	2e-52
Q9FLL4	358	Putative purine permease	no	no	0.935	0.648	0.476	3e-51
Q2V3H2	390	Probable purine permease	no	no	0.963	0.612	0.480	7e-50
Q9FZ96	356	Purine permease 1 OS=Arab	no	no	0.786	0.547	0.410	8e-35

>sp|O49726|PUP9_ARATH Probable purine permease 9 OS=Arabidopsis thaliana GN=PUP9 PE=2 SV=2

 Score =  235 bits (599), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 128/254 (50%), Positives = 169/254 (66%), Gaps = 7/254 (2%)

Query: 1   MEASPELQLQTRVNDRELDSHIDTSVNQQWRFLKLKH---YKWWLRVILYVVCLLVGQSA 57
           M+   E+Q+  +     + +  D   +      KL H   YK WLRV +Y   ++ GQS 
Sbjct: 1   MKGDQEVQVIVQQGKEPIPTDQDERSSVSGSQTKLSHSNTYKRWLRVAIYTFFVISGQSV 60

Query: 58  ATLLGRLYYDKGGNSKWMATFVQSAGFPILLPVLCCFSNGSRSTNKTDPKISTL---VCL 114
           AT+LGRLYY+ GGNSKW+AT VQ  GFPILLP     S  + +T + D K+++L     +
Sbjct: 61  ATILGRLYYENGGNSKWLATVVQLVGFPILLP-YHLLSVKTHTTTQRDGKLTSLRNRALV 119

Query: 115 YVAFGLLLTGDNMMYSYGLLYLPLSTYSLLCATQLAFNAFFSFFLNSQKFTPFIFNSLVL 174
           Y+  GLL+     +YS GLLYLP+ST SL+CA+QLAF AFFS+ LNSQK TP I NSL L
Sbjct: 120 YIVLGLLVGAACYLYSIGLLYLPVSTLSLICASQLAFTAFFSYLLNSQKLTPIILNSLFL 179

Query: 175 LTISATLLAVNADSENTSGVSKGNYVIGFLCTLGASATYSLYLSLLQLSFEKVIKKETFS 234
           LTIS+TLLA N +  ++  V+KG YV GF+CT+GASA + L LSL QL+F KV+KK+TFS
Sbjct: 180 LTISSTLLAFNNEESDSKKVTKGEYVKGFVCTVGASAGFGLLLSLQQLAFRKVLKKQTFS 239

Query: 235 VVMDMQIYSSFVAT 248
            V++M IY S VA+
Sbjct: 240 EVINMIIYMSLVAS 253

Arabidopsis thaliana (taxid: 3702)

>sp|O49725|PUP10_ARATH Probable purine permease 10 OS=Arabidopsis thaliana GN=PUP10 PE=2 SV=2

 Score =  229 bits (583), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 134/256 (52%), Positives = 167/256 (65%), Gaps = 11/256 (4%)

Query: 1   MEASPELQLQTRVNDRELDSHIDTSVNQ----QWRFLKLKHYKWWLRVILYVVCLLVGQS 56
           M A  ELQ+  R   +E +  +    N     Q        YK WLRV LY   ++ GQ+
Sbjct: 1   MTADQELQIIVR-QGKEPNPTVQDERNSVSSSQAEVSHSNTYKRWLRVTLYTFFVISGQT 59

Query: 57  AATLLGRLYYDKGGNSKWMATFVQSAGFPILLPVLC----CFSNGSRSTNKTDPKISTLV 112
            AT+LGR+YYD GGNSKW+AT VQ  GFP+LLP         +   R   +T P+    V
Sbjct: 60  VATILGRVYYDNGGNSKWLATVVQLVGFPVLLPYYILSFKTHATTDRDGKRTSPR--NRV 117

Query: 113 CLYVAFGLLLTGDNMMYSYGLLYLPLSTYSLLCATQLAFNAFFSFFLNSQKFTPFIFNSL 172
            +YV  GLL+  D  +YS GLLYLP+STYSL+CA+QLAFNAFFS+FLNSQK TP I NSL
Sbjct: 118 LVYVVLGLLVGADCYLYSIGLLYLPVSTYSLICASQLAFNAFFSYFLNSQKLTPIILNSL 177

Query: 173 VLLTISATLLAVNADSENTSGVSKGNYVIGFLCTLGASATYSLYLSLLQLSFEKVIKKET 232
            LLTIS+TLLA N +  +++ V+KG YV GF+CT+ ASA Y L LSL QL+F KV+KK+ 
Sbjct: 178 FLLTISSTLLAFNNEETDSTKVTKGEYVKGFICTVAASAGYGLVLSLQQLAFLKVLKKQN 237

Query: 233 FSVVMDMQIYSSFVAT 248
           FS VMDM IY S VA+
Sbjct: 238 FSEVMDMIIYVSLVAS 253

Arabidopsis thaliana (taxid: 3702)

>sp|Q9LPF6|PUP11_ARATH Probable purine permease 11 OS=Arabidopsis thaliana GN=PUP11 PE=1 SV=1

 Score =  219 bits (558), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 123/218 (56%), Positives = 164/218 (75%), Gaps = 1/218 (0%)

Query: 32  FLKLKHYKWWLRVILYVVCLLVGQSAATLLGRLYYDKGGNSKWMATFVQSAGFPILLPVL 91
            LKLK ++WW+ V + +  L+ GQ+A+ LLGR YYD+GGNSKWMAT VQ+A FPIL   L
Sbjct: 34  LLKLKSWQWWVLVSVNIFFLIGGQAASVLLGRFYYDEGGNSKWMATLVQTAAFPILYIPL 93

Query: 92  CCFSNGSRSTNKTDPK-ISTLVCLYVAFGLLLTGDNMMYSYGLLYLPLSTYSLLCATQLA 150
               + +   +      +  +V +YV  G+++ GDNM+YS GLLYL  STYSL+CATQLA
Sbjct: 94  LLLPSSASVESSESSCSLKYIVLIYVLLGVIIAGDNMLYSVGLLYLSASTYSLICATQLA 153

Query: 151 FNAFFSFFLNSQKFTPFIFNSLVLLTISATLLAVNADSENTSGVSKGNYVIGFLCTLGAS 210
           FNA FS+F+N+QKFT  I NS+VLL+ SA L+A+N D++  SGVS+  Y++GF+CTL AS
Sbjct: 154 FNAVFSYFINAQKFTALILNSVVLLSFSAALIALNDDADTPSGVSRSKYIVGFVCTLAAS 213

Query: 211 ATYSLYLSLLQLSFEKVIKKETFSVVMDMQIYSSFVAT 248
           A YSL LSL+Q SFEK++K+ETFSVV++MQIY+S VAT
Sbjct: 214 ALYSLLLSLMQFSFEKILKRETFSVVLEMQIYTSLVAT 251

Arabidopsis thaliana (taxid: 3702)

>sp|O49722|PUP6_ARATH Probable purine permease 6 OS=Arabidopsis thaliana GN=PUP6 PE=3 SV=2

 Score =  213 bits (542), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 120/257 (46%), Positives = 162/257 (63%), Gaps = 25/257 (9%)

Query: 9   LQTRVNDRELDSHIDTSVNQQWRFLKLKH-YKWWLRVILYVVCLLVGQSAATLLGRLYYD 67
           ++     +EL  H++     ++   +  H Y W LRV LYV  LL G++ ATLLGRLYY+
Sbjct: 2   MELESETQELHLHVNGEPEGKFSTEERSHKYSWRLRVSLYVTLLLAGETIATLLGRLYYE 61

Query: 68  KGGNSKWMATFVQSAGFPILLPVLCCFSNGSRSTNKTDPKIS------------TLVCLY 115
           KGG S W+ T VQ  GFP+ LP   C+        K +P  +            TL  +Y
Sbjct: 62  KGGKSTWLETLVQLVGFPLTLP---CYYY-----LKPEPSKTKTITKKTTSSFLTLSLVY 113

Query: 116 VAFGLLLTGDNMMYSYGLLYLPLSTYSLLCATQLAFNAFFSFFLNSQKFTPFIFNSLVLL 175
           +  GLL+ G  ++YS+GLLYLP+ST+SL+ A+QLAFNA FS+FLNSQK TPFI NSLVLL
Sbjct: 114 IGLGLLVAGHCILYSFGLLYLPVSTFSLISASQLAFNAVFSYFLNSQKITPFILNSLVLL 173

Query: 176 TISATLLAVNADSEN----TSGVSKGNYVIGFLCTLGASATYSLYLSLLQLSFEKVIKKE 231
           TIS+TLL +  + E+    +   +K  YVIG++C +G+SA YSL LSL   +FEK++KK 
Sbjct: 174 TISSTLLVIQHEPESPSSTSKSAAKSKYVIGYICAVGSSAGYSLVLSLTDYAFEKILKKY 233

Query: 232 TFSVVMDMQIYSSFVAT 248
           TF  ++DM  Y S VAT
Sbjct: 234 TFKAILDMATYPSMVAT 250

Arabidopsis thaliana (taxid: 3702)

>sp|Q8RY74|PUP21_ARATH Probable purine permease 21 OS=Arabidopsis thaliana GN=PUP21 PE=2 SV=1

 Score =  210 bits (534), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 117/242 (48%), Positives = 159/242 (65%), Gaps = 9/242 (3%)

Query: 14  NDRELDSHI-DTSVNQQWRFLKLKHYKWWLRVILYVVCLLVGQSAATLLGRLYYDKGGNS 72
            D+ L++++ D    + +   + K+ K WLRV +Y + ++  Q  AT+LGRLYY+ GG S
Sbjct: 11  GDQNLEANLLDHEETESFSVPQTKNCKRWLRVSIYAIFVIFCQPLATVLGRLYYENGGKS 70

Query: 73  KWMATFVQSAGFPILLPVLCCFSNGSRSTNKTD------PKISTLVCLYVAFGLLLTGDN 126
            ++ T +Q  GFP+L  +L  F +  R    TD      P  +TL  +Y+  GLL++   
Sbjct: 71  TYVVTLLQLIGFPVL--ILFRFFSRIRQPKSTDTNFSQSPSFTTLASVYLCTGLLVSAYA 128

Query: 127 MMYSYGLLYLPLSTYSLLCATQLAFNAFFSFFLNSQKFTPFIFNSLVLLTISATLLAVNA 186
            + + GLLYLP+ST+SL+ A+QLAF AFFS+FLNSQKFTP I NSL LLT+S+ LL VN 
Sbjct: 129 YLSAVGLLYLPVSTFSLILASQLAFTAFFSYFLNSQKFTPLIVNSLFLLTVSSALLVVNT 188

Query: 187 DSENTSGVSKGNYVIGFLCTLGASATYSLYLSLLQLSFEKVIKKETFSVVMDMQIYSSFV 246
           DSENT+ VS+  YVIGF+CT+GASA   L LSL+QL F KV  K T S V+D+  Y S V
Sbjct: 189 DSENTTNVSRVQYVIGFICTIGASAGIGLVLSLIQLLFRKVFTKHTSSAVLDLANYQSLV 248

Query: 247 AT 248
           AT
Sbjct: 249 AT 250

Arabidopsis thaliana (taxid: 3702)

>sp|Q8RY83|PUP13_ARATH Probable purine permease 13 OS=Arabidopsis thaliana GN=PUP13 PE=2 SV=1

 Score =  208 bits (530), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 113/225 (50%), Positives = 158/225 (70%), Gaps = 4/225 (1%)

Query: 24  TSVNQQWRFLKLKHYKWWLRVILYVVCLLVGQSAATLLGRLYYDKGGNSKWMATFVQSAG 83
           TSV  Q   +KLK   WW+ V + +  L+  Q+ A LLGR YY++GGNSKW++T VQ+ G
Sbjct: 20  TSVPTQ--LMKLKRTHWWILVFISIFFLISAQAIAVLLGRFYYNEGGNSKWISTLVQTCG 77

Query: 84  FPILLPVLCCFSNGSRSTNKTDPKISTLVCLYVAFGLLLTGDNMMYSYGLLYLPLSTYSL 143
           FPIL   LC       S++    K  TLV +Y++ G  +  DN++YS+GLLYL  STYS+
Sbjct: 78  FPILYLPLCFLPASHSSSSSCSFK--TLVWIYLSLGFAIGLDNLLYSFGLLYLSASTYSI 135

Query: 144 LCATQLAFNAFFSFFLNSQKFTPFIFNSLVLLTISATLLAVNADSENTSGVSKGNYVIGF 203
           LC++QLAFN  FS+++NSQK T  I  S++ L++SA L++++ DS + SG SK +Y+IG 
Sbjct: 136 LCSSQLAFNGVFSYYINSQKITCLILFSVLFLSVSAVLVSLDDDSNSPSGDSKWSYLIGC 195

Query: 204 LCTLGASATYSLYLSLLQLSFEKVIKKETFSVVMDMQIYSSFVAT 248
           LCT+ AS  YSL LSL+Q SFE V+K ETFS+V++MQIY+S VA+
Sbjct: 196 LCTVFASLIYSLQLSLMQFSFENVLKSETFSMVLEMQIYTSLVAS 240

Arabidopsis thaliana (taxid: 3702)

>sp|Q0WRB9|PUP8_ARATH Probable purine permease 8 OS=Arabidopsis thaliana GN=PUP8 PE=2 SV=1

 Score =  206 bits (523), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 118/219 (53%), Positives = 154/219 (70%), Gaps = 8/219 (3%)

Query: 36  KHYKWWLRVILYVVCLLVGQSAATLLGRLYYDKGGNSKWMATFVQSAGFPILLPVLCCFS 95
           K+YK WLR+ +YV  +L  Q+ +T+LGR+YY+ GG S WM T VQ  GFP+L   L  F 
Sbjct: 40  KNYKKWLRISIYVFFVLACQALSTILGRVYYENGGKSTWMGTLVQLIGFPVLF--LFRFF 97

Query: 96  NGSRSTNKTDP---KISTLVCL---YVAFGLLLTGDNMMYSYGLLYLPLSTYSLLCATQL 149
           + +++   T+    K S+   L   Y+  GLL++ ++ M S GLLYLP+ST+SL+ A+QL
Sbjct: 98  SQTKNPKPTEADFRKFSSFTILGSVYIVTGLLVSANSYMSSVGLLYLPVSTFSLILASQL 157

Query: 150 AFNAFFSFFLNSQKFTPFIFNSLVLLTISATLLAVNADSENTSGVSKGNYVIGFLCTLGA 209
           AF AFFS+FLNSQKFTPFI NSL LLTIS+ LL VN DSENT+ VS+  YVIG +CT+GA
Sbjct: 158 AFTAFFSYFLNSQKFTPFIVNSLFLLTISSALLVVNTDSENTAKVSRVKYVIGIICTIGA 217

Query: 210 SATYSLYLSLLQLSFEKVIKKETFSVVMDMQIYSSFVAT 248
           SA   L LSL+QL   KV+KK+TFS V D+  Y S VA+
Sbjct: 218 SAGIGLLLSLVQLILRKVLKKQTFSTVTDLVAYQSLVAS 256

Arabidopsis thaliana (taxid: 3702)

>sp|Q9FLL4|PUP12_ARATH Putative purine permease 12 OS=Arabidopsis thaliana GN=PUP12 PE=3 SV=1

 Score =  201 bits (512), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 112/235 (47%), Positives = 160/235 (68%), Gaps = 3/235 (1%)

Query: 15  DRELDSHIDTSVNQQWRFLKLKHYKWWLRVILYVVCLLVGQSAATLLGRLYYDKGGNSKW 74
             E +    TSV  Q   +KL   +WW+ V + +  L+  Q+ + LLGR YY++GGNSKW
Sbjct: 5   KEEDEGRRRTSVPTQ--LMKLNRSQWWILVFISIFFLISAQAISVLLGRFYYNEGGNSKW 62

Query: 75  MATFVQSAGFPIL-LPVLCCFSNGSRSTNKTDPKISTLVCLYVAFGLLLTGDNMMYSYGL 133
           ++T VQ+ GFPIL LP+    ++ S S++ +     TLV +Y++ G  +  DN +YS GL
Sbjct: 63  ISTLVQTGGFPILYLPLSLLPASQSSSSSSSSSSFKTLVWIYLSLGFAIGLDNFLYSVGL 122

Query: 134 LYLPLSTYSLLCATQLAFNAFFSFFLNSQKFTPFIFNSLVLLTISATLLAVNADSENTSG 193
           LYL  STYS+LCA+QLAFN  F +++NSQK T  IF S++ L+ISA L++++ DS + SG
Sbjct: 123 LYLSASTYSILCASQLAFNGVFYYYINSQKITCLIFFSVLFLSISAVLVSLDDDSNSPSG 182

Query: 194 VSKGNYVIGFLCTLGASATYSLYLSLLQLSFEKVIKKETFSVVMDMQIYSSFVAT 248
            SK +Y+IG  C + AS  YSL LSL+Q SFEKV+K ET S+V++MQIY+S VA+
Sbjct: 183 DSKWSYLIGCFCAVFASLIYSLQLSLMQFSFEKVLKSETLSMVLEMQIYTSLVAS 237

Arabidopsis thaliana (taxid: 3702)

>sp|Q2V3H2|PUP7_ARATH Probable purine permease 7 OS=Arabidopsis thaliana GN=PUP7 PE=2 SV=1

 Score =  197 bits (500), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 121/252 (48%), Positives = 165/252 (65%), Gaps = 13/252 (5%)

Query: 3   ASPELQLQTRVNDRELDSHIDTSVNQQWRFLKLKHYKWWLRVILYVVCLLVGQSAATLLG 62
           A+ +  L+  + D E+ +   +S   Q      ++YK WLRV +YV+ +L  Q  AT+LG
Sbjct: 9   ANGDQNLEANLIDHEVVTESSSSAVPQ-----TENYKRWLRVSIYVIFVLFCQPLATILG 63

Query: 63  RLYYDKGGNSKWMATFVQSAGFPILLPVLCCFSNGSRSTNKTD------PKISTLVCLYV 116
           RLYY+ GGNS ++ T +Q  GFP+L  VL  F +  R    TD      P  +TL  +Y+
Sbjct: 64  RLYYENGGNSTYVVTLLQLIGFPVL--VLFRFFSRIRQPKSTDTNFSQSPSFTTLASVYL 121

Query: 117 AFGLLLTGDNMMYSYGLLYLPLSTYSLLCATQLAFNAFFSFFLNSQKFTPFIFNSLVLLT 176
             GLL++    + + GLLYLP+ST+SL+ A+QLAF AFFS+FLNSQKFTP I +SL+LLT
Sbjct: 122 CTGLLVSAYAYLSAVGLLYLPVSTFSLILASQLAFTAFFSYFLNSQKFTPLIVSSLLLLT 181

Query: 177 ISATLLAVNADSENTSGVSKGNYVIGFLCTLGASATYSLYLSLLQLSFEKVIKKETFSVV 236
           +S+ LL VN DSEN++ VS+  YVIGF+CT+GASA   L LSL+Q+ F KV  K T S V
Sbjct: 182 VSSALLVVNTDSENSTNVSRVQYVIGFICTIGASAGIGLLLSLIQMLFRKVFTKHTSSAV 241

Query: 237 MDMQIYSSFVAT 248
            D+ IY S VA+
Sbjct: 242 TDLAIYQSLVAS 253

Arabidopsis thaliana (taxid: 3702)

>sp|Q9FZ96|PUP1_ARATH Purine permease 1 OS=Arabidopsis thaliana GN=PUP1 PE=1 SV=1

 Score =  147 bits (370), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 85/207 (41%), Positives = 125/207 (60%), Gaps = 12/207 (5%)

Query: 54  GQSAATLLGRLYYDKGGNSKWMATFVQSAGFPILL-PVLCCF-------SNGSRSTNKTD 105
           G     LL RLY+  GG   W  +F+ +AGFPI+L P+L  F        N + + NK  
Sbjct: 16  GTCGGPLLTRLYFTNGGKRIWFMSFLSTAGFPIILIPLLVSFLSRRRSNRNPNNAENKRK 75

Query: 106 PKI----STLVCLYVAFGLLLTGDNMMYSYGLLYLPLSTYSLLCATQLAFNAFFSFFLNS 161
            K+    + L    +  GLL   DN +YSYGL YLP+ST SL+  TQLAFNA F+F L  
Sbjct: 76  TKLFLMETPLFIASIVIGLLTGLDNYLYSYGLAYLPVSTSSLIIGTQLAFNALFAFLLVK 135

Query: 162 QKFTPFIFNSLVLLTISATLLAVNADSENTSGVSKGNYVIGFLCTLGASATYSLYLSLLQ 221
           QKFTPF  N++VLLT+   +LA+++D +  +  SK  YV+GFL T+ A+  Y+  L L++
Sbjct: 136 QKFTPFSINAVVLLTVGIGILALHSDGDKPAKESKKEYVVGFLMTVVAALLYAFILPLVE 195

Query: 222 LSFEKVIKKETFSVVMDMQIYSSFVAT 248
           L+++K  ++ TF +V+++Q+     AT
Sbjct: 196 LTYKKARQEITFPLVLEIQMVMCLAAT 222

Proton-coupled purine transporter mediating adenine and trans-zeatin uptake. Also able to transport caffeine and adenosine. May be involved in the uptake of cytokinin, caffeine and nicotine from the xylem sap into shoot tissues.

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	248
224138012	392	predicted protein [Populus trichocarpa]	1.0	0.632	0.671	8e-92
356565414	390	PREDICTED: probable purine permease 11-l	1.0	0.635	0.669	5e-90
413923507	384	hypothetical protein ZEAMMB73_545150 [Ze	0.858	0.554	0.612	1e-73
413923506	482	hypothetical protein ZEAMMB73_545150 [Ze	0.858	0.441	0.617	2e-73
326502496	387	predicted protein [Hordeum vulgare subsp	0.862	0.552	0.614	5e-73
225427292	343	PREDICTED: probable purine permease 9-li	0.782	0.565	0.756	5e-72
359807387	362	uncharacterized protein LOC100819409 [Gl	0.875	0.599	0.617	2e-71
357446895	382	hypothetical protein MTR_2g015470 [Medic	1.0	0.649	0.545	3e-71
242066332	391	hypothetical protein SORBIDRAFT_04g03140	0.858	0.544	0.589	1e-70
357137078	377	PREDICTED: probable purine permease 11-l	0.862	0.567	0.596	5e-70

>gi|224138012|ref|XP_002326496.1| predicted protein [Populus trichocarpa] gi|222833818|gb|EEE72295.1| predicted protein [Populus trichocarpa]

 Score =  342 bits (877), Expect = 8e-92,   Method: Compositional matrix adjust.
 Identities = 176/262 (67%), Positives = 207/262 (79%), Gaps = 14/262 (5%)

Query: 1   MEASPELQLQ-TRVNDRELDSHID-TSVNQQWRFLKLKHYKWWLRVILYVVCLLVGQSAA 58
           ME +  ++LQ T  +D+E +S  D +S+N + +  KL HYKWWLRV  Y++ LL GQSAA
Sbjct: 1   MEDAEGIELQITAADDKEPNSSNDASSINNKMQLPKLIHYKWWLRVTCYILFLLSGQSAA 60

Query: 59  TLLGRLYYDKGGNSKWMATFVQSAGFPILLPVLCCFSNGSRSTNKTDP------------ 106
           TLLG LYYDKGGNSKWMATFVQSAGFPILLP+L  F++   S   T+P            
Sbjct: 61  TLLGGLYYDKGGNSKWMATFVQSAGFPILLPLLFFFTSSINSNTATNPISSSFANKPEGP 120

Query: 107 KISTLVCLYVAFGLLLTGDNMMYSYGLLYLPLSTYSLLCATQLAFNAFFSFFLNSQKFTP 166
           K+STL  LY+ FG LLTGDN+MYSYGLLYLP+STYSLLCATQLAFNA FSFFLNSQK +P
Sbjct: 121 KLSTLTFLYIGFGALLTGDNLMYSYGLLYLPVSTYSLLCATQLAFNALFSFFLNSQKLSP 180

Query: 167 FIFNSLVLLTISATLLAVNADSENTSGVSKGNYVIGFLCTLGASATYSLYLSLLQLSFEK 226
           F+ NSL+LLT SA+LLAVNADSEN++G+ +  YVIGF CTLGASATYSLYLSL+QLSFEK
Sbjct: 181 FVLNSLILLTASASLLAVNADSENSAGIPRRKYVIGFFCTLGASATYSLYLSLVQLSFEK 240

Query: 227 VIKKETFSVVMDMQIYSSFVAT 248
           VI KETFS V++MQIY SFVAT
Sbjct: 241 VINKETFSTVLNMQIYPSFVAT 262

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356565414|ref|XP_003550935.1| PREDICTED: probable purine permease 11-like [Glycine max]

 Score =  336 bits (861), Expect = 5e-90,   Method: Compositional matrix adjust.
 Identities = 174/260 (66%), Positives = 207/260 (79%), Gaps = 12/260 (4%)

Query: 1   MEASPELQLQTRVNDRELDSHIDTSVNQQWRFLKLKHYKWWLRVILYVVCLLVGQSAATL 60
           ME   E QLQ     +  +S  +++V QQ +  + + YKWWLRV LY++ LLVGQSAATL
Sbjct: 1   MEVVQEQQLQNTDGRKLHNSDRNSNVTQQLQHPRFRKYKWWLRVSLYIIFLLVGQSAATL 60

Query: 61  LGRLYYDKGGNSKWMATFVQSAGFPILLPVLCCFS-------NGSRSTN----KTDPKIS 109
           LGRLYYD GGNSKWMATFVQSAGFP+LLP+L  F        N + S N    KT PK S
Sbjct: 61  LGRLYYDNGGNSKWMATFVQSAGFPVLLPLLFYFPRQTHAKFNNNPSNNDYSYKTKPKFS 120

Query: 110 TLVCLYVAFGLLLTGDNMMYSYGLLYLPLSTYSLLCATQLAFNAFFSFFLNSQKFTPFIF 169
           TLV LY+AFGL+LTGDN+MYSYGLLYLPLSTYSLLCATQL FNA FSFFLNSQKFT FI 
Sbjct: 121 TLVFLYLAFGLILTGDNLMYSYGLLYLPLSTYSLLCATQLGFNAVFSFFLNSQKFTAFII 180

Query: 170 NSLVLLTISATLLAVNADS-ENTSGVSKGNYVIGFLCTLGASATYSLYLSLLQLSFEKVI 228
           NS+VLLTISA+LLA+N+DS E+++G+S+  +VIGF CT+GASAT+SLYLSL+QLSF+KVI
Sbjct: 181 NSVVLLTISASLLAINSDSDEDSTGLSREKHVIGFFCTIGASATFSLYLSLVQLSFQKVI 240

Query: 229 KKETFSVVMDMQIYSSFVAT 248
           K+ETFS V+DMQ Y SF+AT
Sbjct: 241 KRETFSAVLDMQFYPSFIAT 260

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|413923507|gb|AFW63439.1| hypothetical protein ZEAMMB73_545150 [Zea mays]

 Score =  281 bits (720), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 133/217 (61%), Positives = 174/217 (80%), Gaps = 4/217 (1%)

Query: 36  KHYKWWLRVILYVVCLLVGQSAATLLGRLYYDKGGNSKWMATFVQSAGFPILLPVLCCFS 95
           KH+ WWL V L +  L+ GQ+A+TLLGR YY++GGNSKWM+TFVQ+AGFP+L   L  F 
Sbjct: 45  KHWHWWLMVTLNIFFLVAGQTASTLLGRFYYNQGGNSKWMSTFVQTAGFPVLFVALYLFR 104

Query: 96  NGSRSTNKT----DPKISTLVCLYVAFGLLLTGDNMMYSYGLLYLPLSTYSLLCATQLAF 151
           + S ST  T    +  ++ +  +YV  GL++  D++MYSYGLLYLP+STYSL+CA+QLAF
Sbjct: 105 SKSPSTQTTTSNPETSVTKITLIYVVLGLIIAADDLMYSYGLLYLPVSTYSLICASQLAF 164

Query: 152 NAFFSFFLNSQKFTPFIFNSLVLLTISATLLAVNADSENTSGVSKGNYVIGFLCTLGASA 211
           NA FS+ LN+QKFTPFIFNS++LLT SA LL V+ DS+ T+G+S+G Y++GF  TLGASA
Sbjct: 165 NAVFSYVLNAQKFTPFIFNSVILLTFSAALLGVDEDSQGTNGLSRGKYILGFALTLGASA 224

Query: 212 TYSLYLSLLQLSFEKVIKKETFSVVMDMQIYSSFVAT 248
           TYSL LSL+Q++FEKVIKKETFSVV++MQIY++ VAT
Sbjct: 225 TYSLILSLMQVAFEKVIKKETFSVVLNMQIYTALVAT 261

Source: Zea mays

Species: Zea mays

Genus: Zea

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|413923506|gb|AFW63438.1| hypothetical protein ZEAMMB73_545150 [Zea mays]

 Score =  281 bits (718), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 134/217 (61%), Positives = 176/217 (81%), Gaps = 4/217 (1%)

Query: 36  KHYKWWLRVILYVVCLLVGQSAATLLGRLYYDKGGNSKWMATFVQSAGFPILLPVLCCFS 95
           KH+ WWL V L +  L+ GQ+A+TLLGR YY++GGNSKWM+TFVQ+AGFP+L   L  F 
Sbjct: 143 KHWHWWLMVTLNIFFLVAGQTASTLLGRFYYNQGGNSKWMSTFVQTAGFPVLFVALYLFR 202

Query: 96  NGSRSTNKT--DPK--ISTLVCLYVAFGLLLTGDNMMYSYGLLYLPLSTYSLLCATQLAF 151
           + S ST  T  +P+  ++ +  +YV  GL++  D++MYSYGLLYLP+STYSL+CA+QLAF
Sbjct: 203 SKSPSTQTTTSNPETSVTKITLIYVVLGLIIAADDLMYSYGLLYLPVSTYSLICASQLAF 262

Query: 152 NAFFSFFLNSQKFTPFIFNSLVLLTISATLLAVNADSENTSGVSKGNYVIGFLCTLGASA 211
           NA FS+ LN+QKFTPFIFNS++LLT SA LL V+ DS+ T+G+S+G Y++GF  TLGASA
Sbjct: 263 NAVFSYVLNAQKFTPFIFNSVILLTFSAALLGVDEDSQGTNGLSRGKYILGFALTLGASA 322

Query: 212 TYSLYLSLLQLSFEKVIKKETFSVVMDMQIYSSFVAT 248
           TYSL LSL+Q++FEKVIKKETFSVV++MQIY++ VAT
Sbjct: 323 TYSLILSLMQVAFEKVIKKETFSVVLNMQIYTALVAT 359

Source: Zea mays

Species: Zea mays

Genus: Zea

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|326502496|dbj|BAJ95311.1| predicted protein [Hordeum vulgare subsp. vulgare]

 Score =  280 bits (715), Expect = 5e-73,   Method: Compositional matrix adjust.
 Identities = 134/218 (61%), Positives = 179/218 (82%), Gaps = 4/218 (1%)

Query: 35  LKHYKWWLRVILYVVCLLVGQSAATLLGRLYYDKGGNSKWMATFVQSAGFPILLPVLCCF 94
           +KH++WWL V+L +  L+ GQ++ATLLGR YY++GGNSKWM+TFVQ+AGFP+L      F
Sbjct: 47  VKHWQWWLMVVLNMFFLIAGQTSATLLGRFYYNEGGNSKWMSTFVQTAGFPVLFVAQFLF 106

Query: 95  SNGSRSTN--KTDPKIS--TLVCLYVAFGLLLTGDNMMYSYGLLYLPLSTYSLLCATQLA 150
              S ST    + P+ S   +  +Y+A GL++  D++MYSYGLLYLP+STYSL+CA+QLA
Sbjct: 107 RPKSPSTQAINSSPEASIIKITLIYIALGLIIAADDLMYSYGLLYLPVSTYSLICASQLA 166

Query: 151 FNAFFSFFLNSQKFTPFIFNSLVLLTISATLLAVNADSENTSGVSKGNYVIGFLCTLGAS 210
           FNA FS+FLN+QKFTP IFNS++LLT SA+LL V+ DS++TS  S+GN+V+GF+ TLGAS
Sbjct: 167 FNAVFSYFLNAQKFTPLIFNSVLLLTFSASLLGVDEDSQSTSDTSQGNHVLGFVLTLGAS 226

Query: 211 ATYSLYLSLLQLSFEKVIKKETFSVVMDMQIYSSFVAT 248
           ATYSL LSL+Q++FEKVIK+ETFSVV++MQIY++FVAT
Sbjct: 227 ATYSLILSLMQVTFEKVIKRETFSVVLNMQIYTAFVAT 264

Source: Hordeum vulgare subsp. vulgare

Species: Hordeum vulgare

Genus: Hordeum

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225427292|ref|XP_002278972.1| PREDICTED: probable purine permease 9-like [Vitis vinifera]

 Score =  276 bits (706), Expect = 5e-72,   Method: Compositional matrix adjust.
 Identities = 152/201 (75%), Positives = 171/201 (85%), Gaps = 7/201 (3%)

Query: 55  QSAATLLGRLYYDKGGNSKWMATFVQSAGFPILLPVLCCFSNGSRSTN-------KTDPK 107
           Q+ ATLLGRLYYDKGGNSKWMATFVQSAGFPILLP+   FS  S+ST           P 
Sbjct: 12  QTRATLLGRLYYDKGGNSKWMATFVQSAGFPILLPLFFFFSPTSKSTPISISPSSAKPPS 71

Query: 108 ISTLVCLYVAFGLLLTGDNMMYSYGLLYLPLSTYSLLCATQLAFNAFFSFFLNSQKFTPF 167
            ST++ LY+ FGLLLTGDN+MYSYGLLYLP+STYSLLCATQLAFNA FSFFLNSQKFT  
Sbjct: 72  FSTILFLYLFFGLLLTGDNLMYSYGLLYLPVSTYSLLCATQLAFNALFSFFLNSQKFTML 131

Query: 168 IFNSLVLLTISATLLAVNADSENTSGVSKGNYVIGFLCTLGASATYSLYLSLLQLSFEKV 227
           I NSLVLLTISA+LLAV++DSE+T+G  KG YVIGFLCTLGASATYSLYLSL+QLSF+KV
Sbjct: 132 ILNSLVLLTISASLLAVHSDSEDTTGTPKGKYVIGFLCTLGASATYSLYLSLVQLSFQKV 191

Query: 228 IKKETFSVVMDMQIYSSFVAT 248
           IK+ETF VV++MQ+Y SFVAT
Sbjct: 192 IKRETFDVVLEMQVYPSFVAT 212

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359807387|ref|NP_001241384.1| uncharacterized protein LOC100819409 [Glycine max] gi|255646272|gb|ACU23620.1| unknown [Glycine max]

 Score =  275 bits (702), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 134/217 (61%), Positives = 165/217 (76%)

Query: 32  FLKLKHYKWWLRVILYVVCLLVGQSAATLLGRLYYDKGGNSKWMATFVQSAGFPILLPVL 91
           F K K ++WW  V L +  L+VGQSAA +LGR YYD+GGNSKWMAT VQ+A FPIL   L
Sbjct: 19  FNKYKRWQWWCLVTLSIAFLIVGQSAAVILGRFYYDQGGNSKWMATLVQTAAFPILFIPL 78

Query: 92  CCFSNGSRSTNKTDPKISTLVCLYVAFGLLLTGDNMMYSYGLLYLPLSTYSLLCATQLAF 151
               +   ++    P I  ++ +Y   G+L+  DNMMYS GLLYL  STYSL+CA+QLAF
Sbjct: 79  FTIPSPPEASTSASPPIKIILLIYFGLGVLIAADNMMYSTGLLYLSASTYSLICASQLAF 138

Query: 152 NAFFSFFLNSQKFTPFIFNSLVLLTISATLLAVNADSENTSGVSKGNYVIGFLCTLGASA 211
           NA FS+F+NSQKFT  I NS V+LT+SA LLAVN D++  SG SKG Y+IGFLCTLGASA
Sbjct: 139 NAVFSYFINSQKFTALIINSTVVLTLSAALLAVNEDTDEPSGFSKGKYIIGFLCTLGASA 198

Query: 212 TYSLYLSLLQLSFEKVIKKETFSVVMDMQIYSSFVAT 248
            YSL LSL+QL+FEKV+KKETFSVV++MQIY+SFVA+
Sbjct: 199 VYSLLLSLMQLTFEKVLKKETFSVVLEMQIYTSFVAS 235

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357446895|ref|XP_003593723.1| hypothetical protein MTR_2g015470 [Medicago truncatula] gi|355482771|gb|AES63974.1| hypothetical protein MTR_2g015470 [Medicago truncatula]

 Score =  273 bits (699), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 138/253 (54%), Positives = 186/253 (73%), Gaps = 5/253 (1%)

Query: 1   MEASPELQLQTRVNDRELDSHIDTSVNQQWRFLKLKHYKWWLRVILYVVCLLVGQSAATL 60
           ME   E  LQ+  N +  +S I+  V QQ +  + K Y+WW RVILY++ LLVGQS++ L
Sbjct: 1   MEMDQEPHLQSSDNIKVPNSDINIIVTQQLQDPRSKDYRWWFRVILYIIFLLVGQSSSLL 60

Query: 61  LGRLYYDKGGNSKWMATFVQSAGFPILLPVLCCFSNGSRSTNKTDPKISTLV-----CLY 115
           L RLYYDKGG SKWM +FVQSAGFP+LLP++  F    +  N      S+++      LY
Sbjct: 61  LERLYYDKGGKSKWMISFVQSAGFPLLLPLIFYFKPHDQFKNMFSNDNSSIIKPNFFALY 120

Query: 116 VAFGLLLTGDNMMYSYGLLYLPLSTYSLLCATQLAFNAFFSFFLNSQKFTPFIFNSLVLL 175
           + FGLL+ G  +MYSYGL+YLPLST+SL+C+T+LAFNA FSFFLNSQ+FT  IFNS+ LL
Sbjct: 121 LGFGLLVEGVYLMYSYGLVYLPLSTFSLICSTELAFNALFSFFLNSQRFTALIFNSVFLL 180

Query: 176 TISATLLAVNADSENTSGVSKGNYVIGFLCTLGASATYSLYLSLLQLSFEKVIKKETFSV 235
           TIS +LLAV++ SE+++ + +  Y++GFL TL A A ++LYL+L+Q SFEK+IK+ETFS 
Sbjct: 181 TISTSLLAVDSISEDSTDLHREKYILGFLFTLCACAAFALYLALVQYSFEKIIKRETFSA 240

Query: 236 VMDMQIYSSFVAT 248
           ++DMQ Y SF+AT
Sbjct: 241 ILDMQFYPSFIAT 253

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|242066332|ref|XP_002454455.1| hypothetical protein SORBIDRAFT_04g031400 [Sorghum bicolor] gi|241934286|gb|EES07431.1| hypothetical protein SORBIDRAFT_04g031400 [Sorghum bicolor]

 Score =  271 bits (694), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 128/217 (58%), Positives = 171/217 (78%), Gaps = 4/217 (1%)

Query: 36  KHYKWWLRVILYVVCLLVGQSAATLLGRLYYDKGGNSKWMATFVQSAGFPILLPVLCCFS 95
           +H+ WWL V L +  L+ GQ+A+TLLGR YY++GGNSKWM+TFVQ+AGFP+L   L  F 
Sbjct: 52  RHWHWWLMVALNIFFLVAGQTASTLLGRFYYNQGGNSKWMSTFVQTAGFPVLFVALYLFR 111

Query: 96  NGSRSTNKT----DPKISTLVCLYVAFGLLLTGDNMMYSYGLLYLPLSTYSLLCATQLAF 151
           + S ST  T    +  ++ +  +Y+  GL++  D++MYSYGLLYLP+STYSL+CA+QLAF
Sbjct: 112 SKSPSTQTTTSNPETSVTKITLIYIVLGLIIAADDLMYSYGLLYLPVSTYSLICASQLAF 171

Query: 152 NAFFSFFLNSQKFTPFIFNSLVLLTISATLLAVNADSENTSGVSKGNYVIGFLCTLGASA 211
           NA FS+ LN+QKFT  I NS++LLT SA LL V+ DS+ T+G+S+G Y++GF  TLGASA
Sbjct: 172 NAVFSYVLNAQKFTALILNSVILLTFSAALLGVDEDSQGTNGLSRGKYILGFTLTLGASA 231

Query: 212 TYSLYLSLLQLSFEKVIKKETFSVVMDMQIYSSFVAT 248
           TYSL LSL+Q++FEKVIKKETFSVV++MQIY++ VAT
Sbjct: 232 TYSLILSLMQVTFEKVIKKETFSVVLNMQIYTALVAT 268

Source: Sorghum bicolor

Species: Sorghum bicolor

Genus: Sorghum

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357137078|ref|XP_003570128.1| PREDICTED: probable purine permease 11-like [Brachypodium distachyon]

 Score =  270 bits (689), Expect = 5e-70,   Method: Compositional matrix adjust.
 Identities = 130/218 (59%), Positives = 175/218 (80%), Gaps = 4/218 (1%)

Query: 35  LKHYKWWLRVILYVVCLLVGQSAATLLGRLYYDKGGNSKWMATFVQSAGFPILLPVLCCF 94
           +K ++WWL V L +  L+ GQ+A+TLLGR YY++GGNSKWM+TFVQ+AGFP+L      F
Sbjct: 37  VKPWQWWLMVTLNMFFLIAGQTASTLLGRFYYNQGGNSKWMSTFVQTAGFPVLFIAQFLF 96

Query: 95  SNGSRSTNKT--DPKIS--TLVCLYVAFGLLLTGDNMMYSYGLLYLPLSTYSLLCATQLA 150
              S ST  T  +P+ S   +  +Y+  GL++  D++MYSYGLLYLP+STYSL+CA+QLA
Sbjct: 97  RPKSPSTQTTTSNPEASGSKITLIYIVLGLIIAADDLMYSYGLLYLPVSTYSLICASQLA 156

Query: 151 FNAFFSFFLNSQKFTPFIFNSLVLLTISATLLAVNADSENTSGVSKGNYVIGFLCTLGAS 210
           FNA FS+ LN+QKFTP IFNS+VLLT SA+LL V+ DS+ T+ +S+G +++GF+ TLGAS
Sbjct: 157 FNAVFSYVLNAQKFTPLIFNSVVLLTFSASLLGVDEDSQGTNDISQGKHILGFVLTLGAS 216

Query: 211 ATYSLYLSLLQLSFEKVIKKETFSVVMDMQIYSSFVAT 248
           ATYSL LSL+Q++FEKVIK+ETFSVV++MQIY++FVAT
Sbjct: 217 ATYSLILSLMQVTFEKVIKRETFSVVLNMQIYTAFVAT 254

Source: Brachypodium distachyon

Species: Brachypodium distachyon

Genus: Brachypodium

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	248
TAIR|locus:2194814	379	PUP11 "AT1G44750" [Arabidopsis	0.870	0.569	0.419	1.9e-44
TAIR|locus:2141907	390	PUP10 "AT4G18210" [Arabidopsis	0.987	0.628	0.386	4.9e-37
TAIR|locus:2141887	387	PUP6 "AT4G18190" [Arabidopsis	0.955	0.612	0.366	3.1e-35
TAIR|locus:2138203	361	ATPUP13 "AT4G08700" [Arabidops	0.887	0.609	0.367	2.8e-34
TAIR|locus:1009023376	394	PUP8 "AT4G18195" [Arabidopsis	0.850	0.535	0.383	1.2e-33
TAIR|locus:2163026	358	PUP12 "AT5G41160" [Arabidopsis	0.899	0.622	0.353	1.5e-33
TAIR|locus:1009023346	390	PUP7 "AT4G18197" [Arabidopsis	0.963	0.612	0.353	6.7e-33
TAIR|locus:1009023365	377	AT4G18205 "AT4G18205" [Arabido	0.935	0.615	0.348	3.7e-32
TAIR|locus:2032148	356	PUP1 "AT1G28230" [Arabidopsis	0.826	0.575	0.290	5.4e-19
TAIR|locus:2057666	358	PUP2 "AT2G33750" [Arabidopsis	0.826	0.572	0.260	6.9e-17

TAIR|locus:2194814 PUP11 "AT1G44750" [Arabidopsis thaliana (taxid:3702)]

 Score = 468 (169.8 bits), Expect = 1.9e-44, P = 1.9e-44
 Identities = 91/217 (41%), Positives = 131/217 (60%)

Query:    33 LKLKHYKWWLRVILYVVCLLVGQSAATLLGRLYYDKGGNSKWMATFVQSAGFPIL-LPVL 91
             LKLK ++WW+ V + +  L+ GQ+A+ LLGR YYD+GGNSKWMAT VQ+A FPIL +P+L
Sbjct:    35 LKLKSWQWWVLVSVNIFFLIGGQAASVLLGRFYYDEGGNSKWMATLVQTAAFPILYIPLL 94

Query:    92 CCFSNGSRSTNKTDPKISTLVCLYVAFGLLLTGDNMMXXXXXXXXXXXXXXXXCATXXXX 151
                S+ S  ++++   +  +V +YV  G+++ GDNM+                CAT    
Sbjct:    95 LLPSSASVESSESSCSLKYIVLIYVLLGVIIAGDNMLYSVGLLYLSASTYSLICATQLAF 154

Query:   152 XXXXXXXXXXXKFTPFIFNSLVLLTISATLLAVNADSENTSGVSKGNYVIGFLCTXXXXX 211
                        KFT  I NS+VLL+ SA L+A+N D++  SGVS+  Y++GF+CT     
Sbjct:   155 NAVFSYFINAQKFTALILNSVVLLSFSAALIALNDDADTPSGVSRSKYIVGFVCTLAASA 214

Query:   212 XXXXXXXXXXXXFEKVIKKETFSVVMDMQIYSSFVAT 248
                         FEK++K+ETFSVV++MQIY+S VAT
Sbjct:   215 LYSLLLSLMQFSFEKILKRETFSVVLEMQIYTSLVAT 251

GO:0005345 "purine nucleobase transmembrane transporter activity" evidence=ISS;TAS

GO:0009507 "chloroplast" evidence=ISM

GO:0015931 "nucleobase-containing compound transport" evidence=ISS;TAS

GO:0006863 "purine nucleobase transport" evidence=RCA;TAS

GO:0016020 "membrane" evidence=TAS

TAIR|locus:2141907 PUP10 "AT4G18210" [Arabidopsis thaliana (taxid:3702)]

 Score = 398 (145.2 bits), Expect = 4.9e-37, P = 4.9e-37
 Identities = 99/256 (38%), Positives = 129/256 (50%)

Query:     1 MEASPELQLQTRVNDRELDSHIDTSVNQ-QWRFLKLKH---YKWWLRVILYVVCLLVGQS 56
             M A  ELQ+  R   +E +  +    N       ++ H   YK WLRV LY   ++ GQ+
Sbjct:     1 MTADQELQIIVR-QGKEPNPTVQDERNSVSSSQAEVSHSNTYKRWLRVTLYTFFVISGQT 59

Query:    57 AATLLGRLYYDKGGNSKWMATFVQSAGFPILLPV-LCCFSNGS---RSTNKTDPKISTLV 112
              AT+LGR+YYD GGNSKW+AT VQ  GFP+LLP  +  F   +   R   +T P+   LV
Sbjct:    60 VATILGRVYYDNGGNSKWLATVVQLVGFPVLLPYYILSFKTHATTDRDGKRTSPRNRVLV 119

Query:   113 CLYVAFGLLLTGDNMMXXXXXXXXXXXXXXXXCATXXXXXXXXXXXXXXXKFTPFIFNSL 172
               YV  GLL+  D  +                CA+               K TP I NSL
Sbjct:   120 --YVVLGLLVGADCYLYSIGLLYLPVSTYSLICASQLAFNAFFSYFLNSQKLTPIILNSL 177

Query:   173 VLLTISATLLAVNADSENTSGVSKGNYVIGFLCTXXXXXXXXXXXXXXXXXFEKVIKKET 232
              LLTIS+TLLA N +  +++ V+KG YV GF+CT                 F KV+KK+ 
Sbjct:   178 FLLTISSTLLAFNNEETDSTKVTKGEYVKGFICTVAASAGYGLVLSLQQLAFLKVLKKQN 237

Query:   233 FSVVMDMQIYSSFVAT 248
             FS VMDM IY S VA+
Sbjct:   238 FSEVMDMIIYVSLVAS 253

GO:0005345 "purine nucleobase transmembrane transporter activity" evidence=ISS;TAS

GO:0005737 "cytoplasm" evidence=ISM

GO:0015931 "nucleobase-containing compound transport" evidence=ISS;TAS

GO:0006863 "purine nucleobase transport" evidence=TAS

GO:0016020 "membrane" evidence=TAS

GO:0009624 "response to nematode" evidence=IEP

TAIR|locus:2141887 PUP6 "AT4G18190" [Arabidopsis thaliana (taxid:3702)]

 Score = 381 (139.2 bits), Expect = 3.1e-35, P = 3.1e-35
 Identities = 93/254 (36%), Positives = 123/254 (48%)

Query:     6 ELQLQTRVNDRELDSHIDTSVNQQWRFLKLKH-YKWWLRVILYVVCLLVGQSAATLLGRL 64
             EL+ +T+    EL  H++     ++   +  H Y W LRV LYV  LL G++ ATLLGRL
Sbjct:     3 ELESETQ----ELHLHVNGEPEGKFSTEERSHKYSWRLRVSLYVTLLLAGETIATLLGRL 58

Query:    65 YYDKGGNSKWMATFVQSAGFPILLPVLCCF------SNGSRSTNKTDPKISTLVCLYVAF 118
             YY+KGG S W+ T VQ  GFP+ LP  C +      S     T KT     TL  +Y+  
Sbjct:    59 YYEKGGKSTWLETLVQLVGFPLTLP--CYYYLKPEPSKTKTITKKTTSSFLTLSLVYIGL 116

Query:   119 GLLLTGDNMMXXXXXXXXXXXXXXXXCATXXXXXXXXXXXXXXXKFTPFIFNSLVLLTIS 178
             GLL+ G  ++                 A+               K TPFI NSLVLLTIS
Sbjct:   117 GLLVAGHCILYSFGLLYLPVSTFSLISASQLAFNAVFSYFLNSQKITPFILNSLVLLTIS 176

Query:   179 ATLLAVNADSENTSGVSKG----NYVIGFLCTXXXXXXXXXXXXXXXXXFEKVIKKETFS 234
             +TLL +  + E+ S  SK      YVIG++C                  FEK++KK TF 
Sbjct:   177 STLLVIQHEPESPSSTSKSAAKSKYVIGYICAVGSSAGYSLVLSLTDYAFEKILKKYTFK 236

Query:   235 VVMDMQIYSSFVAT 248
              ++DM  Y S VAT
Sbjct:   237 AILDMATYPSMVAT 250

GO:0005345 "purine nucleobase transmembrane transporter activity" evidence=ISS;TAS

GO:0015931 "nucleobase-containing compound transport" evidence=ISS;TAS

GO:0006863 "purine nucleobase transport" evidence=TAS

GO:0016020 "membrane" evidence=TAS

TAIR|locus:2138203 ATPUP13 "AT4G08700" [Arabidopsis thaliana (taxid:3702)]

 Score = 372 (136.0 bits), Expect = 2.8e-34, P = 2.8e-34
 Identities = 83/226 (36%), Positives = 123/226 (54%)

Query:    24 TSVNQQWRFLKLKHYKWWLRVILYVVCLLVGQSAATLLGRLYYDKGGNSKWMATFVQSAG 83
             TSV  Q   +KLK   WW+ V + +  L+  Q+ A LLGR YY++GGNSKW++T VQ+ G
Sbjct:    20 TSVPTQ--LMKLKRTHWWILVFISIFFLISAQAIAVLLGRFYYNEGGNSKWISTLVQTCG 77

Query:    84 FPIL-LPVLCCFSNGSRSTNKTDPKISTLVCLYVAFGLLLTGDNMMXXXXXXXXXXXXXX 142
             FPIL LP+  CF   S S++ +     TLV +Y++ G  +  DN++              
Sbjct:    78 FPILYLPL--CFLPASHSSSSSC-SFKTLVWIYLSLGFAIGLDNLLYSFGLLYLSASTYS 134

Query:   143 XXCATXXXXXXXXXXXXXXXKFTPFIFNSLVLLTISATLLAVNADSENTSGVSKGNYVIG 202
               C++               K T  I  S++ L++SA L++++ DS + SG SK +Y+IG
Sbjct:   135 ILCSSQLAFNGVFSYYINSQKITCLILFSVLFLSVSAVLVSLDDDSNSPSGDSKWSYLIG 194

Query:   203 FLCTXXXXXXXXXXXXXXXXXFEKVIKKETFSVVMDMQIYSSFVAT 248
              LCT                 FE V+K ETFS+V++MQIY+S VA+
Sbjct:   195 CLCTVFASLIYSLQLSLMQFSFENVLKSETFSMVLEMQIYTSLVAS 240

GO:0005345 "purine nucleobase transmembrane transporter activity" evidence=ISS;TAS

GO:0015931 "nucleobase-containing compound transport" evidence=ISS;TAS

GO:0006863 "purine nucleobase transport" evidence=TAS

GO:0016020 "membrane" evidence=TAS

TAIR|locus:1009023376 PUP8 "AT4G18195" [Arabidopsis thaliana (taxid:3702)]

 Score = 366 (133.9 bits), Expect = 1.2e-33, P = 1.2e-33
 Identities = 84/219 (38%), Positives = 114/219 (52%)

Query:    36 KHYKWWLRVILYVVCLLVGQSAATLLGRLYYDKGGNSKWMATFVQSAGFPILLPVLCCFS 95
             K+YK WLR+ +YV  +L  Q+ +T+LGR+YY+ GG S WM T VQ  GFP+L   L  F 
Sbjct:    40 KNYKKWLRISIYVFFVLACQALSTILGRVYYENGGKSTWMGTLVQLIGFPVLF--LFRFF 97

Query:    96 NGSRSTNKTDP---KISTLVCL---YVAFGLLLTGDNMMXXXXXXXXXXXXXXXXCATXX 149
             + +++   T+    K S+   L   Y+  GLL++ ++ M                 A+  
Sbjct:    98 SQTKNPKPTEADFRKFSSFTILGSVYIVTGLLVSANSYMSSVGLLYLPVSTFSLILASQL 157

Query:   150 XXXXXXXXXXXXXKFTPFIFNSLVLLTISATLLAVNADSENTSGVSKGNYVIGFLCTXXX 209
                          KFTPFI NSL LLTIS+ LL VN DSENT+ VS+  YVIG +CT   
Sbjct:   158 AFTAFFSYFLNSQKFTPFIVNSLFLLTISSALLVVNTDSENTAKVSRVKYVIGIICTIGA 217

Query:   210 XXXXXXXXXXXXXXFEKVIKKETFSVVMDMQIYSSFVAT 248
                             KV+KK+TFS V D+  Y S VA+
Sbjct:   218 SAGIGLLLSLVQLILRKVLKKQTFSTVTDLVAYQSLVAS 256

GO:0005345 "purine nucleobase transmembrane transporter activity" evidence=TAS

GO:0006863 "purine nucleobase transport" evidence=TAS

GO:0015931 "nucleobase-containing compound transport" evidence=TAS

GO:0016020 "membrane" evidence=TAS

TAIR|locus:2163026 PUP12 "AT5G41160" [Arabidopsis thaliana (taxid:3702)]

 Score = 365 (133.5 bits), Expect = 1.5e-33, P = 1.5e-33
 Identities = 80/226 (35%), Positives = 121/226 (53%)

Query:    24 TSVNQQWRFLKLKHYKWWLRVILYVVCLLVGQSAATLLGRLYYDKGGNSKWMATFVQSAG 83
             TSV  Q   +KL   +WW+ V + +  L+  Q+ + LLGR YY++GGNSKW++T VQ+ G
Sbjct:    14 TSVPTQ--LMKLNRSQWWILVFISIFFLISAQAISVLLGRFYYNEGGNSKWISTLVQTGG 71

Query:    84 FPIL-LPVLCCFSNGSRSTNKTDPKISTLVCLYVAFGLLLTGDNMMXXXXXXXXXXXXXX 142
             FPIL LP+    ++ S S++ +     TLV +Y++ G  +  DN +              
Sbjct:    72 FPILYLPLSLLPASQSSSSSSSSSSFKTLVWIYLSLGFAIGLDNFLYSVGLLYLSASTYS 131

Query:   143 XXCATXXXXXXXXXXXXXXXKFTPFIFNSLVLLTISATLLAVNADSENTSGVSKGNYVIG 202
               CA+               K T  IF S++ L+ISA L++++ DS + SG SK +Y+IG
Sbjct:   132 ILCASQLAFNGVFYYYINSQKITCLIFFSVLFLSISAVLVSLDDDSNSPSGDSKWSYLIG 191

Query:   203 FLCTXXXXXXXXXXXXXXXXXFEKVIKKETFSVVMDMQIYSSFVAT 248
               C                  FEKV+K ET S+V++MQIY+S VA+
Sbjct:   192 CFCAVFASLIYSLQLSLMQFSFEKVLKSETLSMVLEMQIYTSLVAS 237

GO:0005345 "purine nucleobase transmembrane transporter activity" evidence=ISS;TAS

GO:0005739 "mitochondrion" evidence=ISM

GO:0015931 "nucleobase-containing compound transport" evidence=ISS;TAS

GO:0006863 "purine nucleobase transport" evidence=TAS

GO:0016020 "membrane" evidence=TAS

TAIR|locus:1009023346 PUP7 "AT4G18197" [Arabidopsis thaliana (taxid:3702)]

 Score = 359 (131.4 bits), Expect = 6.7e-33, P = 6.7e-33
 Identities = 89/252 (35%), Positives = 125/252 (49%)

Query:     3 ASPELQLQTRVNDRELDSHIDTSVNQQWRFLKLKHYKWWLRVILYVVCLLVGQSAATLLG 62
             A+ +  L+  + D E+ +   +S   Q      ++YK WLRV +YV+ +L  Q  AT+LG
Sbjct:     9 ANGDQNLEANLIDHEVVTESSSSAVPQ-----TENYKRWLRVSIYVIFVLFCQPLATILG 63

Query:    63 RLYYDKGGNSKWMATFVQSAGFPILLPVLCCFSNGSRSTNKTD------PKISTLVCLYV 116
             RLYY+ GGNS ++ T +Q  GFP+L  VL  F +  R    TD      P  +TL  +Y+
Sbjct:    64 RLYYENGGNSTYVVTLLQLIGFPVL--VLFRFFSRIRQPKSTDTNFSQSPSFTTLASVYL 121

Query:   117 AFGLLLTGDNMMXXXXXXXXXXXXXXXXCATXXXXXXXXXXXXXXXKFTPFIFNSLVLLT 176
               GLL++    +                 A+               KFTP I +SL+LLT
Sbjct:   122 CTGLLVSAYAYLSAVGLLYLPVSTFSLILASQLAFTAFFSYFLNSQKFTPLIVSSLLLLT 181

Query:   177 ISATLLAVNADSENTSGVSKGNYVIGFLCTXXXXXXXXXXXXXXXXXFEKVIKKETFSVV 236
             +S+ LL VN DSEN++ VS+  YVIGF+CT                 F KV  K T S V
Sbjct:   182 VSSALLVVNTDSENSTNVSRVQYVIGFICTIGASAGIGLLLSLIQMLFRKVFTKHTSSAV 241

Query:   237 MDMQIYSSFVAT 248
              D+ IY S VA+
Sbjct:   242 TDLAIYQSLVAS 253

GO:0005345 "purine nucleobase transmembrane transporter activity" evidence=TAS

GO:0006863 "purine nucleobase transport" evidence=TAS

GO:0015931 "nucleobase-containing compound transport" evidence=TAS

GO:0016020 "membrane" evidence=TAS

TAIR|locus:1009023365 AT4G18205 "AT4G18205" [Arabidopsis thaliana (taxid:3702)]

 Score = 352 (129.0 bits), Expect = 3.7e-32, P = 3.7e-32
 Identities = 84/241 (34%), Positives = 119/241 (49%)

Query:    15 DRELDSHI-DTSVNQQWRFLKLKHYKWWLRVILYVVCLLVGQSAATLLGRLYYDKGGNSK 73
             D+ L++++ D    + +   + K+ K WLRV +Y + ++  Q  AT+LGRLYY+ GG S 
Sbjct:    12 DQNLEANLLDHEETESFSVPQTKNCKRWLRVSIYAIFVIFCQPLATVLGRLYYENGGKST 71

Query:    74 WMATFVQSAGFPILLPVLCCFSNGSRSTNKTD------PKISTLVCLYVAFGLLLTGDNM 127
             ++ T +Q  GFP+L  +L  F +  R    TD      P  +TL  +Y+  GLL++    
Sbjct:    72 YVVTLLQLIGFPVL--ILFRFFSRIRQPKSTDTNFSQSPSFTTLASVYLCTGLLVSAYAY 129

Query:   128 MXXXXXXXXXXXXXXXXCATXXXXXXXXXXXXXXXKFTPFIFNSLVLLTISATLLAVNAD 187
             +                 A+               KFTP I NSL LLT+S+ LL VN D
Sbjct:   130 LSAVGLLYLPVSTFSLILASQLAFTAFFSYFLNSQKFTPLIVNSLFLLTVSSALLVVNTD 189

Query:   188 SENTSGVSKGNYVIGFLCTXXXXXXXXXXXXXXXXXFEKVIKKETFSVVMDMQIYSSFVA 247
             SENT+ VS+  YVIGF+CT                 F KV  K T S V+D+  Y S VA
Sbjct:   190 SENTTNVSRVQYVIGFICTIGASAGIGLVLSLIQLLFRKVFTKHTSSAVLDLANYQSLVA 249

Query:   248 T 248
             T
Sbjct:   250 T 250

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2032148 PUP1 "AT1G28230" [Arabidopsis thaliana (taxid:3702)]

 Score = 229 (85.7 bits), Expect = 5.4e-19, P = 5.4e-19
 Identities = 63/217 (29%), Positives = 99/217 (45%)

Query:    44 VILYVVCLLVGQSAATLLGRLYYDKGGNSKWMATFVQSAGFPILL-PVLCCFSNGSRST- 101
             +I+  + L +G     LL RLY+  GG   W  +F+ +AGFPI+L P+L  F +  RS  
Sbjct:     6 IIINCIILTIGTCGGPLLTRLYFTNGGKRIWFMSFLSTAGFPIILIPLLVSFLSRRRSNR 65

Query:   102 ------NKTDPKISTLVC-LYVAFGL--LLTG-DNMMXXXXXXXXXXXXXXXXCATXXXX 151
                   NK   K+  +   L++A  +  LLTG DN +                  T    
Sbjct:    66 NPNNAENKRKTKLFLMETPLFIASIVIGLLTGLDNYLYSYGLAYLPVSTSSLIIGTQLAF 125

Query:   152 XXXXXXXXXXXKFTPFIFNSLVLLTISATLLAVNADSENTSGVSKGNYVIGFLCTXXXXX 211
                        KFTPF  N++VLLT+   +LA+++D +  +  SK  YV+GFL T     
Sbjct:   126 NALFAFLLVKQKFTPFSINAVVLLTVGIGILALHSDGDKPAKESKKEYVVGFLMTVVAAL 185

Query:   212 XXXXXXXXXXXXFEKVIKKETFSVVMDMQIYSSFVAT 248
                         ++K  ++ TF +V+++Q+     AT
Sbjct:   186 LYAFILPLVELTYKKARQEITFPLVLEIQMVMCLAAT 222

GO:0005345 "purine nucleobase transmembrane transporter activity" evidence=ISS;IDA

GO:0009507 "chloroplast" evidence=ISM

GO:0015931 "nucleobase-containing compound transport" evidence=ISS;IDA

GO:0016020 "membrane" evidence=IEA

GO:0005887 "integral to plasma membrane" evidence=ISS

GO:0006863 "purine nucleobase transport" evidence=RCA;IDA

GO:0010184 "cytokinin transport" evidence=IDA

GO:0015211 "purine nucleoside transmembrane transporter activity" evidence=IDA

TAIR|locus:2057666 PUP2 "AT2G33750" [Arabidopsis thaliana (taxid:3702)]

 Score = 211 (79.3 bits), Expect = 6.9e-17, P = 6.9e-17
 Identities = 55/211 (26%), Positives = 92/211 (43%)

Query:    44 VILYVVCLLVGQSAATLLGRLYYDKGGNSKWMATFVQSAGFPILL-PVLCCFSNGSR--S 100
             VI+  + L +G     L+ RLY+  GG   W  +F+Q+ G P++  P+L  F    R   
Sbjct:     8 VIINCIFLAIGNCGGPLMMRLYFQNGGERIWFPSFLQTVGCPLIFFPLLLSFLRRRRCLE 67

Query:   101 TNKTDPKISTLVCLYVA---FGLLLTGDNMMXXXXXXXXXXXXXXXXCATXXXXXXXXXX 157
               +T P       L++A    GLL+  DN +                 +           
Sbjct:    68 EQETTPFFLMKPPLFIAAIVVGLLVGFDNYLYSYGLAYIPVSTASLIISAQLGFTALFAF 127

Query:   158 XXXXXKFTPFIFNSLVLLTISATLLAVNADSENTSGVSKGNYVIGFLCTXXXXXXXXXXX 217
                  KFTPF  N++VLLT  A +LA+N+DS+  +  +   YV+GF+ T           
Sbjct:   128 FMVKQKFTPFTINAIVLLTGGAVVLALNSDSDKLANETHKEYVVGFIMTLGAALLYGFIL 187

Query:   218 XXXXXXFEKVIKKETFSVVMDMQIYSSFVAT 248
                   ++K  ++ T+++ ++ Q+   F AT
Sbjct:   188 PLVELSYKKSGQRITYTLALEFQMVLCFAAT 218

GO:0005345 "purine nucleobase transmembrane transporter activity" evidence=ISS;TAS

GO:0015931 "nucleobase-containing compound transport" evidence=ISS;TAS

GO:0016020 "membrane" evidence=IEA;TAS

GO:0006863 "purine nucleobase transport" evidence=TAS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
O49725	PUP10_ARATH	No assigned EC number	0.5234	0.9879	0.6282	yes	no
O49726	PUP9_ARATH	No assigned EC number	0.5039	0.9959	0.6333	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: eugene3.00290140 hypothetical protein (392 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	248
pfam03151	149	pfam03151, TPT, Triose-phosphate Transporter famil	2e-05
pfam04142	238	pfam04142, Nuc_sug_transp, Nucleotide-sugar transp	0.002

>gnl|CDD|217390 pfam03151, TPT, Triose-phosphate Transporter family

 Score = 42.9 bits (102), Expect = 2e-05
 Identities = 19/47 (40%), Positives = 26/47 (55%), Gaps = 2/47 (4%)

Query: 202 GFLCTLGASATYSLYLSLLQLSFEKVIKKETFSVVMDMQIYSSFVAT 248
           GF+  L ASA ++L L L Q   +K  KK T   V+++  Y S VA 
Sbjct: 1   GFILALAASALFALRLILSQKLLKK--KKGTKLNVLELLYYLSPVAF 45

This family includes transporters with a specificity for triose phosphate. Length = 149

>gnl|CDD|217924 pfam04142, Nuc_sug_transp, Nucleotide-sugar transporter

 Score = 38.0 bits (89), Expect = 0.002
 Identities = 30/130 (23%), Positives = 57/130 (43%), Gaps = 13/130 (10%)

Query: 120 LLLTGDNMMYSYGLLYLPLSTYSLLCATQLAFNAFFSFFLNSQKFTPFIFNSLVLLTISA 179
            + T  N +    L  L  +TY +    ++   A FS  +  +K + + + SL+LL +  
Sbjct: 25  FIYTLQNNLLYVALSNLDAATYQVTYQLKILTTALFSVLMLGRKLSWYQWASLLLLFLGV 84

Query: 180 TLL-AVNADSE-NTSGVSKGNYVIGFLCTLGA---SATYSLYLSLLQLSFEKVIKKETFS 234
            ++      SE N+   ++ N  +G    L A   S    +Y       FEK++K    S
Sbjct: 85  AIVQLDQKSSETNSKRGAEQNPGLGLSAVLAACFTSGFAGVY-------FEKILKGSNTS 137

Query: 235 V-VMDMQIYS 243
           + + ++Q+Y 
Sbjct: 138 IWIRNIQLYF 147

This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles. Human SLC35A1 transports CMP-sialic acid, SLC35A2 transports UDP-galactose and SLC35A3 transports UDP-GlcNAc. Length = 238

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	248
PF04142	244	Nuc_sug_transp: Nucleotide-sugar transporter; Inte	99.69
KOG2234	345	consensus Predicted UDP-galactose transporter [Car	99.68
KOG2765	416	consensus Predicted membrane protein [Function unk	99.51
PF06027	334	DUF914: Eukaryotic protein of unknown function (DU	99.5
PF08449	303	UAA: UAA transporter family; InterPro: IPR013657 T	99.23
TIGR00817	302	tpt Tpt phosphate/phosphoenolpyruvate translocator	99.12
PTZ00343	350	triose or hexose phosphate/phosphate translocator;	99.1
TIGR00950	260	2A78 Carboxylate/Amino Acid/Amine Transporter.	99.06
PLN00411	358	nodulin MtN21 family protein; Provisional	98.99
TIGR00688	256	rarD rarD protein. This uncharacterized protein is	98.9
PRK11272	292	putative DMT superfamily transporter inner membran	98.85
COG0697	292	RhaT Permeases of the drug/metabolite transporter	98.68
PRK15430	296	putative chloramphenical resistance permease RarD;	98.68
PRK11453	299	O-acetylserine/cysteine export protein; Provisiona	98.68
TIGR03340	281	phn_DUF6 phosphonate utilization associated putati	98.61
PF13536	113	EmrE: Multidrug resistance efflux transporter	98.58
PF00892	126	EamA: EamA-like transporter family; InterPro: IPR0	98.55
TIGR00776	290	RhaT RhaT L-rhamnose-proton symporter family prote	98.54
PRK11689	295	aromatic amino acid exporter; Provisional	98.53
PRK10532	293	threonine and homoserine efflux system; Provisiona	98.21
KOG1443	349	consensus Predicted integral membrane protein [Fun	98.03
PLN00411	358	nodulin MtN21 family protein; Provisional	97.89
PRK15051	111	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	97.85
PRK10532	293	threonine and homoserine efflux system; Provisiona	97.8
TIGR00950	260	2A78 Carboxylate/Amino Acid/Amine Transporter.	97.8
TIGR00776	290	RhaT RhaT L-rhamnose-proton symporter family prote	97.78
KOG4510	346	consensus Permease of the drug/metabolite transpor	97.73
PF03151	153	TPT: Triose-phosphate Transporter family; InterPro	97.69
KOG3912	372	consensus Predicted integral membrane protein [Gen	97.69
TIGR00803	222	nst UDP-galactose transporter. NSTs generally appe	97.66
PRK11689	295	aromatic amino acid exporter; Provisional	97.55
KOG1441	316	consensus Glucose-6-phosphate/phosphate and phosph	97.52
PRK11272	292	putative DMT superfamily transporter inner membran	97.36
KOG4314	290	consensus Predicted carbohydrate/phosphate translo	97.32
PRK15430	296	putative chloramphenical resistance permease RarD;	97.32
COG2962	293	RarD Predicted permeases [General function predict	97.31
TIGR03340	281	phn_DUF6 phosphonate utilization associated putati	97.28
PF06800	269	Sugar_transport: Sugar transport protein; InterPro	97.27
TIGR00817	302	tpt Tpt phosphate/phosphoenolpyruvate translocator	97.14
PRK10452	120	multidrug efflux system protein MdtJ; Provisional	97.02
PRK13499	345	rhamnose-proton symporter; Provisional	97.0
PRK11453	299	O-acetylserine/cysteine export protein; Provisiona	96.88
COG2510	140	Predicted membrane protein [Function unknown]	96.83
PF05653	300	Mg_trans_NIPA: Magnesium transporter NIPA; InterPr	96.72
PRK02971	129	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	96.23
COG0697	292	RhaT Permeases of the drug/metabolite transporter	96.18
PRK10650	109	multidrug efflux system protein MdtI; Provisional	96.07
PRK11431	105	multidrug efflux system protein; Provisional	95.98
PRK09541	110	emrE multidrug efflux protein; Reviewed	95.96
COG2076	106	EmrE Membrane transporters of cations and cationic	95.88
PTZ00343	350	triose or hexose phosphate/phosphate translocator;	95.45
TIGR00803	222	nst UDP-galactose transporter. NSTs generally appe	95.15
PRK13499	345	rhamnose-proton symporter; Provisional	95.06
COG5006	292	rhtA Threonine/homoserine efflux transporter [Amin	95.01
KOG1444	314	consensus Nucleotide-sugar transporter VRG4/SQV-7	94.98
KOG1582	367	consensus UDP-galactose transporter related protei	94.84
KOG1583	330	consensus UDP-N-acetylglucosamine transporter [Car	94.81
PF00893	93	Multi_Drug_Res: Small Multidrug Resistance protein	93.85
PF06379	344	RhaT: L-rhamnose-proton symport protein (RhaT); In	93.73
PF06027	334	DUF914: Eukaryotic protein of unknown function (DU	93.27
COG5006	292	rhtA Threonine/homoserine efflux transporter [Amin	91.55
KOG2922	335	consensus Uncharacterized conserved protein [Funct	91.46
PF08449	303	UAA: UAA transporter family; InterPro: IPR013657 T	90.99
COG2962	293	RarD Predicted permeases [General function predict	90.52
PF04657	138	DUF606: Protein of unknown function, DUF606; Inter	87.47
PF10639	113	UPF0546: Uncharacterised protein family UPF0546; I	87.43
PF06800	269	Sugar_transport: Sugar transport protein; InterPro	86.85
TIGR00688	256	rarD rarD protein. This uncharacterized protein is	85.77
KOG1581	327	consensus UDP-galactose transporter related protei	85.38
KOG2766	336	consensus Predicted membrane protein [Function unk	82.62

>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles

Probab=99.69  E-value=3.6e-16  Score=140.32  Aligned_cols=132  Identities=25%  Similarity=0.371  Sum_probs=114.1

Q ss_pred             hHHHHHHHHHHHHHHHHhHHHHHhhhcccchhhHHHHHhhhhHHHHHHHHHHhccccchHHHHHHHHHHHHHHHHhccCC
Q 043307          108 ISTLVCLYVAFGLLLTGDNMMYSYGLLYLPLSTYSLLCATQLAFNAFFSFFLNSQKFTPFIFNSLVLLTISATLLAVNAD  187 (248)
Q Consensus       108 ~~~l~~~~~~lGvl~a~~n~lYa~gl~yLp~ST~sLi~sTqL~FTAiFs~li~~~kfT~~~insvvLlt~g~~Ll~l~~~  187 (248)
                      .+|-...+++=+++|+.+|.++.+++.|+|++||+++.++++++||+|++++.|+|+++.+|.|++++++|.++.+.++.
T Consensus        13 ~~~~~~~~~vPA~lY~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~qW~aL~lL~~Gv~lv~~~~~   92 (244)
T PF04142_consen   13 SPKDTLKLAVPALLYAIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSRRQWLALFLLVAGVVLVQLSSS   92 (244)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHheeecCCc
Confidence            35667788899999999999999999999999999999999999999999999999999999999999999999887664


Q ss_pred             CCC--CC--C----CCCcccchhHHHHHHHHHHHHHHHHHHHHHHHHhhcccceeeehh-hhhhh
Q 043307          188 SEN--TS--G----VSKGNYVIGFLCTLGASATYSLYLSLLQLSFEKVIKKETFSVVMD-MQIYS  243 (248)
Q Consensus       188 s~~--~~--~----~~~~~y~lGf~~tL~Asalygl~l~L~ql~f~Kv~k~~t~~~vle-mQi~~  243 (248)
                      .++  ++  +    .++..+.+|+++++.++.++|+    ...++||++|++..+.+++ +|++.
T Consensus        93 ~~~~~~~~~~~~~~~~~~~~~~G~~~vl~~~~~S~~----agVy~E~~lK~~~~s~~~~N~qL~~  153 (244)
T PF04142_consen   93 QSSDNSSSSSVHHDASNQNPLLGLLAVLAAAFLSGF----AGVYFEKLLKRSNVSLWIQNMQLYL  153 (244)
T ss_pred             cccccccccccccccccchhHhHHHHHHHHHHHHHH----HHHHHHHHhcccchhHHHHHHHHHH
Confidence            431  11  1    1345688999999999999999    6666799999988788886 88775

P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane

>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]

Probab=99.68  E-value=4e-16  Score=146.40  Aligned_cols=128  Identities=23%  Similarity=0.273  Sum_probs=113.6

Q ss_pred             HHHHHHHHHHHHHhHHHHHhhhcccchhhHHHHHhhhhHHHHHHHHHHhccccchHHHHHHHHHHHHHHHHhccCCCCCC
Q 043307          112 VCLYVAFGLLLTGDNMMYSYGLLYLPLSTYSLLCATQLAFNAFFSFFLNSQKFTPFIFNSLVLLTISATLLAVNADSENT  191 (248)
Q Consensus       112 ~~~~~~lGvl~a~~n~lYa~gl~yLp~ST~sLi~sTqL~FTAiFs~li~~~kfT~~~insvvLlt~g~~Ll~l~~~s~~~  191 (248)
                      .....+=.++|+.||.++-+++.|+|++||++.++.++.+||+|+.+++++|+++.||.|++++++|+++++++..+..+
T Consensus        92 ~lk~~vPa~iYalqNnl~yval~~ldaatyqVt~qlKI~tTA~f~vl~L~rkLs~~Qw~Al~lL~~Gv~~vQ~~~~~~~~  171 (345)
T KOG2234|consen   92 TLKVSVPALIYALQNNLQYVALSNLDAATYQVTYQLKILTTAIFSVLILRRKLSRLQWMALVLLFAGVALVQLPSLSPTG  171 (345)
T ss_pred             HHHHHHHHHHHHHhhhHHHHHHhcCCchhhhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhccCCCCCC
Confidence            33444556799999999999999999999999999999999999999999999999999999999999999966544332


Q ss_pred             --CCCCCcccchhHHHHHHHHHHHHHHHHHHHHHHHHhhcccceeeehh-hhhhh
Q 043307          192 --SGVSKGNYVIGFLCTLGASATYSLYLSLLQLSFEKVIKKETFSVVMD-MQIYS  243 (248)
Q Consensus       192 --~~~~~~~y~lGf~~tL~Asalygl~l~L~ql~f~Kv~k~~t~~~vle-mQi~~  243 (248)
                        ++.+..+.+.|+...+++|.++|+    .+.+|||++|+..-+++++ +|++.
T Consensus       172 a~~~~~~~n~~~G~~avl~~c~~Sgf----AgvYfEkiLK~s~~s~wi~NiqL~~  222 (345)
T KOG2234|consen  172 AKSESSAQNPFLGLVAVLVACFLSGF----AGVYFEKILKGSNVSLWIRNIQLYF  222 (345)
T ss_pred             ccCCCcccchhhhHHHHHHHHHHHHH----HHHHHHHHHhcCCchHHHHHHHHHH
Confidence              356788999999999999999999    8899999999999899987 88875

>KOG2765 consensus Predicted membrane protein [Function unknown]

Probab=99.51  E-value=1.5e-13  Score=130.38  Aligned_cols=131  Identities=19%  Similarity=0.301  Sum_probs=116.3

Q ss_pred             HHHHHHHHHHHHHHHhHHHHHhhhcccchhhHHHHHhhhhHHHHHHHHHHhccccchHHHHHHHHHHHHHHHHhccCCCC
Q 043307          110 TLVCLYVAFGLLLTGDNMMYSYGLLYLPLSTYSLLCATQLAFNAFFSFFLNSQKFTPFIFNSLVLLTISATLLAVNADSE  189 (248)
Q Consensus       110 ~l~~~~~~lGvl~a~~n~lYa~gl~yLp~ST~sLi~sTqL~FTAiFs~li~~~kfT~~~insvvLlt~g~~Ll~l~~~s~  189 (248)
                      +.+...+.++++|.+.|+.|+.+++|..|+..+++.+|.-.||.+++.+...+|||..++.+|.+...|.+++..+++..
T Consensus       157 ~~ak~sl~fc~lWF~anl~~naALa~TsVAS~TilSStSs~FtL~la~if~~e~ft~sKllav~~si~GViiVt~~~s~~  236 (416)
T KOG2765|consen  157 QTAKLSLFFCPLWFLANLTSNAALAFTSVASTTILSSTSSFFTLFLAAIFPVERFTLSKLLAVFVSIAGVIIVTMGDSKQ  236 (416)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHcCcchhhHHHHHHHHHhhccEEEEEeccccc
Confidence            78889999999999999999999999999999999999999999999999999999999999999999999977776544


Q ss_pred             CCCCCCCcccchhHHHHHHHHHHHHHHHHHHHHHHHHhhcccceeeehhhhhhhhhhc
Q 043307          190 NTSGVSKGNYVIGFLCTLGASATYSLYLSLLQLSFEKVIKKETFSVVMDMQIYSSFVA  247 (248)
Q Consensus       190 ~~~~~~~~~y~lGf~~tL~Asalygl~l~L~ql~f~Kv~k~~t~~~vlemQi~~slvA  247 (248)
                       .++...++..+|.++++.+|++||+|+.+.    +|-..++.  --++||++.++|.
T Consensus       237 -~~~~~a~~~llG~llaL~sA~~YavY~vll----k~~~~~eg--~rvdi~lffGfvG  287 (416)
T KOG2765|consen  237 -NSDLPASRPLLGNLLALLSALLYAVYTVLL----KRKIGDEG--ERVDIQLFFGFVG  287 (416)
T ss_pred             -cccCCccchhHHHHHHHHHHHHHHHHHHHH----Hhhccccc--ccccHHHHHHHHH
Confidence             344556678999999999999999999998    77666661  2788999988874

>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function

Probab=99.50  E-value=1e-12  Score=123.36  Aligned_cols=168  Identities=17%  Similarity=0.219  Sum_probs=125.2

Q ss_pred             CCCchhHHHHHhhhCchhhhhhhhhcccCCCCCCCCCCchHHHHHHHHHHHHHHHHhHHHHHhhhcccchhhHHHHHhhh
Q 043307           69 GGNSKWMATFVQSAGFPILLPVLCCFSNGSRSTNKTDPKISTLVCLYVAFGLLLTGDNMMYSYGLLYLPLSTYSLLCATQ  148 (248)
Q Consensus        69 gG~s~W~~t~vqtagfPlll~~~~~~~~~~~~~~~~~p~~~~l~~~~~~lGvl~a~~n~lYa~gl~yLp~ST~sLi~sTq  148 (248)
                      |=+-+.++++..=..-.+..-|..+.+. .++  ......++--..|+.+|++....|++...|+.|.++++.+++.++-
T Consensus        39 ~~~~P~~Qs~~~Y~~l~~vy~~~~~~r~-~~~--~~~~~~~~~~w~y~lla~~Dv~aN~~~v~a~~yTsvtS~~lL~~~~  115 (334)
T PF06027_consen   39 GVNIPTFQSFFNYVLLALVYTPILLYRR-GFK--KWLKVLKRPWWKYFLLALLDVEANYLVVLAYQYTSVTSVQLLDCTS  115 (334)
T ss_pred             CccCcHHHHHHHHHHHHHHHhhhhhhcc-ccc--cchhhcchhHHHHHHHHHHHHHHHHHHHHHhhcccHhHHHhhhhhh
Confidence            6667888887765443333333333211 111  1111122334578889999999999999999999999999999999


Q ss_pred             hHHHHHHHHHHhccccchHHHHHHHHHHHHHHHHhccCCCCCCCCCCCcccchhHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 043307          149 LAFNAFFSFFLNSQKFTPFIFNSLVLLTISATLLAVNADSENTSGVSKGNYVIGFLCTLGASATYSLYLSLLQLSFEKVI  228 (248)
Q Consensus       149 L~FTAiFs~li~~~kfT~~~insvvLlt~g~~Ll~l~~~s~~~~~~~~~~y~lGf~~tL~Asalygl~l~L~ql~f~Kv~  228 (248)
                      ..|+.++|++++|+|+++.++.++++.+.|.+++...|....+++.+..+.++|.++++.||++||++-.+.    ||.+
T Consensus       116 i~~~~~LS~~fL~~ry~~~~~~gv~i~i~Gv~lv~~sD~~~~~~~~~~~~~i~GDll~l~~a~lya~~nV~~----E~~v  191 (334)
T PF06027_consen  116 IPFVMILSFIFLKRRYSWFHILGVLICIAGVVLVVVSDVLSGSDSSSGSNPILGDLLALLGAILYAVSNVLE----EKLV  191 (334)
T ss_pred             hHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhheeeecccccccCCCCCccchhHHHHHHHHHHHHHHHHHH----HHhc
Confidence            999999999999999999999999999999999877664433333455678999999999999999988877    6666


Q ss_pred             cccceeeehhhhhhhhhh
Q 043307          229 KKETFSVVMDMQIYSSFV  246 (248)
Q Consensus       229 k~~t~~~vlemQi~~slv  246 (248)
                      |+.+   ..|+.-..+++
T Consensus       192 ~~~~---~~~~lg~~Glf  206 (334)
T PF06027_consen  192 KKAP---RVEFLGMLGLF  206 (334)
T ss_pred             ccCC---HHHHHHHHHHH
Confidence            6655   34554444444

Some of the sequences in this family are annotated as putative membrane proteins.

>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []

Probab=99.23  E-value=4.8e-10  Score=102.19  Aligned_cols=177  Identities=15%  Similarity=0.197  Sum_probs=132.9

Q ss_pred             HHHHHHHHHhcCCC-chhHHHHHhhhCchhhhhhhhhcccCCCCCCCCCCchHHHHHHHHHHHHHHHHhHHHHHhhhccc
Q 043307           58 ATLLGRLYYDKGGN-SKWMATFVQSAGFPILLPVLCCFSNGSRSTNKTDPKISTLVCLYVAFGLLLTGDNMMYSYGLLYL  136 (248)
Q Consensus        58 ~~LL~r~Yy~~gG~-s~W~~t~vqtagfPlll~~~~~~~~~~~~~~~~~p~~~~l~~~~~~lGvl~a~~n~lYa~gl~yL  136 (248)
                      +.+..++.-.+.++ ..|+.+++|-+.-.+.-.+......+++  .+..|     ..-|+..+++....+.+-..++.|+
T Consensus        16 g~~qE~i~~~~~~~~~~~~lt~~q~~~~~~~~~~~~~~~~~~~--~~~~~-----~~~~~~~~~~~~~~~~~~~~al~~i   88 (303)
T PF08449_consen   16 GILQEKIMTTPYGSPFPLFLTFVQFAFNALFSFILLSLFKFPK--SRKIP-----LKKYAILSFLFFLASVLSNAALKYI   88 (303)
T ss_pred             HHHHHHHHcCCCCCcccHHHHHHHHHHHHHHHHHHHHhccccC--CCcCh-----HHHHHHHHHHHHHHHHHHHHHHHhC
Confidence            45566666666666 6999999999888876655544322111  12222     2245666788888999999999999


Q ss_pred             chhhHHHHHhhhhHHHHHHHHHHhccccchHHHHHHHHHHHHHHHHhccCCCCCCCC-CCCcccchhHHHHHHHHHHHHH
Q 043307          137 PLSTYSLLCATQLAFNAFFSFFLNSQKFTPFIFNSLVLLTISATLLAVNADSENTSG-VSKGNYVIGFLCTLGASATYSL  215 (248)
Q Consensus       137 p~ST~sLi~sTqL~FTAiFs~li~~~kfT~~~insvvLlt~g~~Ll~l~~~s~~~~~-~~~~~y~lGf~~tL~Asalygl  215 (248)
                      |++|+.++-++++++++++++++.|+|.++.++.+++++++|.++.+++++.+++.. ..+.....|.++.+.+-++.|+
T Consensus        89 ~~p~~~~~ks~~~i~vmi~~~l~~~k~y~~~~~~~v~li~~Gv~~~~~~~~~~~~~~~~~~~~~~~G~~ll~~sl~~~a~  168 (303)
T PF08449_consen   89 SYPTQIVFKSSKPIPVMILGVLILGKRYSRRQYLSVLLITIGVAIFTLSDSSSSSSSNSSSFSSALGIILLLLSLLLDAF  168 (303)
T ss_pred             ChHHHHHHhhhHHHHHHHHHHHhcCccccHHHHHHHHHHHhhHheeeecccccccccccccccchhHHHHHHHHHHHHHH
Confidence            999999999999999999999999999999999999999999999988876655433 2223334599999999999999


Q ss_pred             HHHHHHHHHHHhhcccceeeehhhhhhhhhh
Q 043307          216 YLSLLQLSFEKVIKKETFSVVMDMQIYSSFV  246 (248)
Q Consensus       216 ~l~L~ql~f~Kv~k~~t~~~vlemQi~~slv  246 (248)
                      ....-|..++|.-+..     .|+-.+..+.
T Consensus       169 ~~~~qe~~~~~~~~~~-----~~~mfy~n~~  194 (303)
T PF08449_consen  169 TGVYQEKLFKKYGKSP-----WELMFYTNLF  194 (303)
T ss_pred             HHHHHHHHHHHhCCcH-----HHHHHHHHHH
Confidence            8888876666543322     5555555443

; GO: 0055085 transmembrane transport

>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator

Probab=99.12  E-value=6.1e-09  Score=94.19  Aligned_cols=152  Identities=16%  Similarity=0.121  Sum_probs=108.5

Q ss_pred             HHHHHHHHHhcCCCchhHHHHHhhhC-chhhhhhhhhcccCCCCCCCCCCchHHHHHHHHHHHHHHHHhHHHHHhhhccc
Q 043307           58 ATLLGRLYYDKGGNSKWMATFVQSAG-FPILLPVLCCFSNGSRSTNKTDPKISTLVCLYVAFGLLLTGDNMMYSYGLLYL  136 (248)
Q Consensus        58 ~~LL~r~Yy~~gG~s~W~~t~vqtag-fPlll~~~~~~~~~~~~~~~~~p~~~~l~~~~~~lGvl~a~~n~lYa~gl~yL  136 (248)
                      -.++.+.=. ++..-++..++.|-.. +.++.+. .....++++     +..++-....+.+|++.+.+..+.++|++|+
T Consensus        17 ~~~~NK~~l-~~~~~P~~~~~~~~~~~~~~~~~~-~~~~~~~~~-----~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~   89 (302)
T TIGR00817        17 FNIYNKKLL-NVFPYPYFKTLISLAVGSLYCLLS-WSSGLPKRL-----KISSALLKLLLPVAIVHTIGHVTSNVSLSKV   89 (302)
T ss_pred             HHHHHHHHH-hhCChhHHHHHHHHHHHHHHHHHH-HHhCCCCCC-----CCCHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            334444333 3457789999988653 3332222 111111111     1223444556667777788888999999999


Q ss_pred             chhhHHHHHhhhhHHHHHHHHHHhccccchHHHHHHHHHHHHHHHHhccCCCCCCCCCCCcccchhHHHHHHHHHHHHHH
Q 043307          137 PLSTYSLLCATQLAFNAFFSFFLNSQKFTPFIFNSLVLLTISATLLAVNADSENTSGVSKGNYVIGFLCTLGASATYSLY  216 (248)
Q Consensus       137 p~ST~sLi~sTqL~FTAiFs~li~~~kfT~~~insvvLlt~g~~Ll~l~~~s~~~~~~~~~~y~lGf~~tL~Asalygl~  216 (248)
                      ++|.++++.+++.+|++++++++.|||+++.++.++++.++|+++.+ +.+.        +....|+++.++|++.++++
T Consensus        90 s~s~~~li~~~~Pv~~~ll~~~~~~e~~~~~~~~~l~l~~~Gv~l~~-~~~~--------~~~~~G~~~~l~a~~~~a~~  160 (302)
T TIGR00817        90 AVSFTHTIKAMEPFFSVVLSAFFLGQEFPSTLWLSLLPIVGGVALAS-DTEL--------SFNWAGFLSAMISNITFVSR  160 (302)
T ss_pred             cHHHHHHHHhcchHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHhhhc-CCcc--------cccHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999998743 1111        12357999999999999998


Q ss_pred             HHHHHHHHHHhhc
Q 043307          217 LSLLQLSFEKVIK  229 (248)
Q Consensus       217 l~L~ql~f~Kv~k  229 (248)
                      ....    ||..+
T Consensus       161 ~v~~----k~~~~  169 (302)
T TIGR00817       161 NIFS----KKAMT  169 (302)
T ss_pred             HHHH----HHhhc
Confidence            7766    66655

specificities overlap.

>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional

Probab=99.10  E-value=1.1e-08  Score=95.85  Aligned_cols=168  Identities=13%  Similarity=0.091  Sum_probs=113.9

Q ss_pred             HHHHHHHHHHhccchHHHHHHHHHhcCCCchhHHHHHhhh-CchhhhhhhhhcccCCCCCCCCCCchHHHHHHHHHHHHH
Q 043307           43 RVILYVVCLLVGQSAATLLGRLYYDKGGNSKWMATFVQSA-GFPILLPVLCCFSNGSRSTNKTDPKISTLVCLYVAFGLL  121 (248)
Q Consensus        43 lv~~~~~~l~~G~~~~~LL~r~Yy~~gG~s~W~~t~vqta-gfPlll~~~~~~~~~~~~~~~~~p~~~~l~~~~~~lGvl  121 (248)
                      .+.+.++.-...+....+..+.=.+. -.-+|..++.|-. ++-+..+.+..-+.++++   . +..++-....+.+|++
T Consensus        49 ~~~~~~~~wy~~s~~~~~~nK~vl~~-~~~P~~l~~~~~~~~~l~~~~~~~~~~~~~~~---~-~~~~~~~~~llp~gl~  123 (350)
T PTZ00343         49 KLALLFLTWYALNVLYVVDNKLALNM-LPLPWTISSLQLFVGWLFALLYWATGFRKIPR---I-KSLKLFLKNFLPQGLC  123 (350)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHh-CChhHHHHHHHHHHHHHHHHHHHHhCCCCCCC---C-CCHHHHHHHHHHHHHH
Confidence            33344455555556666666655544 3448999999965 444443333222221111   1 1112222333344444


Q ss_pred             HHHhHHHHHhhhcccchhhHHHHHhhhhHHHHHHHHHHhccccchHHHHHHHHHHHHHHHHhccCCCCCCCCCCCcccch
Q 043307          122 LTGDNMMYSYGLLYLPLSTYSLLCATQLAFNAFFSFFLNSQKFTPFIFNSLVLLTISATLLAVNADSENTSGVSKGNYVI  201 (248)
Q Consensus       122 ~a~~n~lYa~gl~yLp~ST~sLi~sTqL~FTAiFs~li~~~kfT~~~insvvLlt~g~~Ll~l~~~s~~~~~~~~~~y~l  201 (248)
                      ....+.....|+++.++|.++++-++.++||+++++++.+||+++.++.++++.++|..+...++.         +....
T Consensus       124 ~~~~~~~~~~sl~~~svs~~~iika~~Pvft~lls~~~l~ek~s~~~~l~l~l~v~Gv~l~~~~~~---------~~~~~  194 (350)
T PTZ00343        124 HLFVHFGAVISMGLGAVSFTHVVKAAEPVFTALLSILFLKQFLNLYAYLSLIPIVGGVALASVKEL---------HFTWL  194 (350)
T ss_pred             HHHHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHheecccc---------hhHHH
Confidence            444445455899999999999999999999999999999999999999999999999999653211         12468


Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHH
Q 043307          202 GFLCTLGASATYSLYLSLLQLSF  224 (248)
Q Consensus       202 Gf~~tL~Asalygl~l~L~ql~f  224 (248)
                      |+++++.|++.++++..+.+...
T Consensus       195 G~~~~l~s~~~~a~~~i~~k~~~  217 (350)
T PTZ00343        195 AFWCAMLSNLGSSLRSIFAKKTM  217 (350)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHh
Confidence            99999999999999998884433

>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter

Probab=99.06  E-value=8.5e-09  Score=90.02  Aligned_cols=148  Identities=20%  Similarity=0.228  Sum_probs=105.0

Q ss_pred             HHHHHHHhcCCCchhHHHHHhhhCchhhhhhhhhcccCCCCCCCCCCchHHHHHHHHHHHHHHHHhHHHHHhhhcccchh
Q 043307           60 LLGRLYYDKGGNSKWMATFVQSAGFPILLPVLCCFSNGSRSTNKTDPKISTLVCLYVAFGLLLTGDNMMYSYGLLYLPLS  139 (248)
Q Consensus        60 LL~r~Yy~~gG~s~W~~t~vqtagfPlll~~~~~~~~~~~~~~~~~p~~~~l~~~~~~lGvl~a~~n~lYa~gl~yLp~S  139 (248)
                      ...|.-.++ +-..|..++.....-++++.|.+..+    +     + .++.....+..++..+..+.+|.+|++|+|++
T Consensus         6 ~~~k~~~~~-~~~~~~~~~~r~~~~~l~l~~~~~~~----~-----~-~~~~~~~~~~~~~~~~l~~~~~~~a~~~~~~~   74 (260)
T TIGR00950         6 VVIGQYLEG-QVPLYFAVFRRLIFALLLLLPLLRRR----P-----P-LKRLLRLLLLGALQIGVFYVLYFVAVKRLPVG   74 (260)
T ss_pred             HHHHHHHhc-CCCHHHHHHHHHHHHHHHHHHHHHhc----c-----C-HhHHHHHHHHHHHHHHHHHHHHHHHHHhcChh
Confidence            344554444 34455555555543344444443321    1     1 11222333444455678889999999999999


Q ss_pred             hHHHHHhhhhHHHHHHHHHHhccccchHHHHHHHHHHHHHHHHhccCCCCCCCCCCCcccchhHHHHHHHHHHHHHHHHH
Q 043307          140 TYSLLCATQLAFNAFFSFFLNSQKFTPFIFNSLVLLTISATLLAVNADSENTSGVSKGNYVIGFLCTLGASATYSLYLSL  219 (248)
Q Consensus       140 T~sLi~sTqL~FTAiFs~li~~~kfT~~~insvvLlt~g~~Ll~l~~~s~~~~~~~~~~y~lGf~~tL~Asalygl~l~L  219 (248)
                      +.+++.+++.+|+++++.++.|||.++.++.++++..+|..++..+++        .+.+..|+++.+.|++.++.+...
T Consensus        75 ~~~ii~~~~P~~~~~~~~l~~~e~~~~~~~~gi~i~~~Gv~li~~~~~--------~~~~~~G~~~~l~a~~~~a~~~~~  146 (260)
T TIGR00950        75 EAALLLYLAPLYVTLLSDLMGKERPRKLVLLAAVLGLAGAVLLLSDGN--------LSINPAGLLLGLGSGISFALGTVL  146 (260)
T ss_pred             hhHHHHhhhHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHhhccCCc--------ccccHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999999999999999999999999999999999763321        123468999999999999998777


Q ss_pred             HHHHHHHhhcc
Q 043307          220 LQLSFEKVIKK  230 (248)
Q Consensus       220 ~ql~f~Kv~k~  230 (248)
                      .    +|..++
T Consensus       147 ~----k~~~~~  153 (260)
T TIGR00950       147 Y----KRLVKK  153 (260)
T ss_pred             H----hHHhhc
Confidence            7    665544

>PLN00411 nodulin MtN21 family protein; Provisional

Probab=98.99  E-value=4.1e-08  Score=92.86  Aligned_cols=164  Identities=16%  Similarity=0.089  Sum_probs=108.5

Q ss_pred             hccchHHHHHHHHHhcCCCchhHHHHHhhhCchhhhhhhhhcccCCCCCCCCCCchHHHHHHHHHHHHHHHHhHHHHHhh
Q 043307           53 VGQSAATLLGRLYYDKGGNSKWMATFVQSAGFPILLPVLCCFSNGSRSTNKTDPKISTLVCLYVAFGLLLTGDNMMYSYG  132 (248)
Q Consensus        53 ~G~~~~~LL~r~Yy~~gG~s~W~~t~vqtagfPlll~~~~~~~~~~~~~~~~~p~~~~l~~~~~~lGvl~a~~n~lYa~g  132 (248)
                      ++..+=..+.|.-++.|=+..-+..+=-..+..+++|..+..+ ++++  .+ +..+|.....+.+|++-...+.++.+|
T Consensus        23 ~~~~~~~~~~k~a~~~G~~~~~~~~~R~~iA~l~Ll~~~~~~~-~~~~--~~-~~~~~~~~~l~l~g~~g~~~~~~~~~g   98 (358)
T PLN00411         23 TSVVGISTLFKVATSKGLNIYPFLGYSYLLASLLLLPSLFFTN-RSRS--LP-PLSVSILSKIGLLGFLGSMYVITGYIG   98 (358)
T ss_pred             HHHHHHHHHHHHHHHCCCCccHHHHHHHHHHHHHHHHHHHHHH-Hhcc--cC-cchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            3444556788888866666554444433444444444333321 1111  11 111222233333444444455678899


Q ss_pred             hcccchhhHHHHHhhhhHHHHHHHHHH------hccccchHHHHHHHHHHHHHHHHhccCCCC---------------C-
Q 043307          133 LLYLPLSTYSLLCATQLAFNAFFSFFL------NSQKFTPFIFNSLVLLTISATLLAVNADSE---------------N-  190 (248)
Q Consensus       133 l~yLp~ST~sLi~sTqL~FTAiFs~li------~~~kfT~~~insvvLlt~g~~Ll~l~~~s~---------------~-  190 (248)
                      ++|+|++..+++.+++.+|++++++++      .+||.++.++.++++..+|+.++..+.+..               . 
T Consensus        99 l~~tsa~~asll~~~~P~~~~lla~~~~~e~~~~~er~~~~~~~G~~l~~~Gv~ll~~~~g~~~~~~~~~~~~~~~~~~~  178 (358)
T PLN00411         99 IEYSNPTLASAISNITPALTFILAIIFRMEKVSFKERSSVAKVMGTILSLIGALVVIFYHGPRVFVASSPPYLNFRQLSP  178 (358)
T ss_pred             HhhccHHHHHHHHHhhHHHHHHHHHHHHhchhhhcccccHHHHHHHHHHHHHHHHHHHccCccccccccccccccccccc
Confidence            999999999999999999999999999      699999999999999999999876533211               0 


Q ss_pred             CCCCCCcccchhHHHHHHHHHHHHHHHHHH
Q 043307          191 TSGVSKGNYVIGFLCTLGASATYSLYLSLL  220 (248)
Q Consensus       191 ~~~~~~~~y~lGf~~tL~Asalygl~l~L~  220 (248)
                      +.........+|..+.++|++.++++..+.
T Consensus       179 ~~~~~~~~~~lG~~l~l~aa~~wa~~~il~  208 (358)
T PLN00411        179 PLSSSNSDWLIGGALLTIQGIFVSVSFILQ  208 (358)
T ss_pred             ccCCCcccHHHHHHHHHHHHHHHHHHHHHH
Confidence            011122334669999999999999988777

>TIGR00688 rarD rarD protein

Probab=98.90  E-value=5.8e-08  Score=85.73  Aligned_cols=149  Identities=12%  Similarity=0.056  Sum_probs=102.6

Q ss_pred             chHHHHHHHHHhcCCCchhHHHHHhhh-CchhhhhhhhhcccCCC-CCCCCCCchHHHHHHHHHHHHHHHHhHHHHHhhh
Q 043307           56 SAATLLGRLYYDKGGNSKWMATFVQSA-GFPILLPVLCCFSNGSR-STNKTDPKISTLVCLYVAFGLLLTGDNMMYSYGL  133 (248)
Q Consensus        56 ~~~~LL~r~Yy~~gG~s~W~~t~vqta-gfPlll~~~~~~~~~~~-~~~~~~p~~~~l~~~~~~lGvl~a~~n~lYa~gl  133 (248)
                      ....+..|..  .+ -+++...+.... |.+++++.......+++ +++-+.+..++........|++.+..+.+|.+|+
T Consensus        15 g~~~~~~k~~--~~-~~~~~i~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~a~   91 (256)
T TIGR00688        15 GYMYYYSKLL--KP-LPATDILGHRMIWSFPFMLLSVTLFRQWAALIERLKRIQKRPLILSLLLCGLLIGFNWWLFIWAV   91 (256)
T ss_pred             HHHHHHHHHh--cc-CCHHHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHhCcccchHHHHHHHHHHHHHHHHHHHHHHH
Confidence            3455667752  22 555655555553 56655443333221110 0000111122344455666778899999999999


Q ss_pred             cccchhhHHHHHhhhhHHHHHHHHHHhccccchHHHHHHHHHHHHHHHHhccCCCCCCCCCCCcccchhHHHHHHHHHHH
Q 043307          134 LYLPLSTYSLLCATQLAFNAFFSFFLNSQKFTPFIFNSLVLLTISATLLAVNADSENTSGVSKGNYVIGFLCTLGASATY  213 (248)
Q Consensus       134 ~yLp~ST~sLi~sTqL~FTAiFs~li~~~kfT~~~insvvLlt~g~~Ll~l~~~s~~~~~~~~~~y~lGf~~tL~Asaly  213 (248)
                      +|.|+++.+++.++..+|+++++.++.|||+++.++.++++..+|.+++..+ +++        ..    ++.++|++.|
T Consensus        92 ~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~~~l~~~~~~~Gv~li~~~-~~~--------~~----~~~l~aa~~~  158 (256)
T TIGR00688        92 NNGSSLEVSLGYLINPLVMVALGRVFLKERISRFQFIAVIIATLGVISNIVL-KGS--------LP----WEALVLAFSF  158 (256)
T ss_pred             HcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHH-cCC--------ch----HHHHHHHHHH
Confidence            9999999999999999999999999999999999999999999999986532 111        11    3578889999


Q ss_pred             HHHHHHH
Q 043307          214 SLYLSLL  220 (248)
Q Consensus       214 gl~l~L~  220 (248)
                      +++....
T Consensus       159 a~~~i~~  165 (256)
T TIGR00688       159 TAYGLIR  165 (256)
T ss_pred             HHHHHHH
Confidence            9887766

This uncharacterized protein is predicted to have many membrane-spanning domains.

>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional

Probab=98.85  E-value=4.3e-07  Score=82.17  Aligned_cols=163  Identities=17%  Similarity=0.097  Sum_probs=109.6

Q ss_pred             hhHHHHHHHHHHHHhccchHHHHHHHHHhcCCCchhHHHHHhhh-CchhhhhhhhhcccCCCCCCCCCCchHHHHHHHHH
Q 043307           39 KWWLRVILYVVCLLVGQSAATLLGRLYYDKGGNSKWMATFVQSA-GFPILLPVLCCFSNGSRSTNKTDPKISTLVCLYVA  117 (248)
Q Consensus        39 ~~w~lv~~~~~~l~~G~~~~~LL~r~Yy~~gG~s~W~~t~vqta-gfPlll~~~~~~~~~~~~~~~~~p~~~~l~~~~~~  117 (248)
                      |.-+-+++..+++.+=-..+.+..|.=.+  +-+++..+..... +..+++ |++..+.  ++  .  + .+|.....+.
T Consensus         4 ~~~~~~~~~~~~~~~iWg~~~~~~K~~~~--~~~p~~~~~~R~~~a~l~ll-~~~~~~~--~~--~--~-~~~~~~~~~~   73 (292)
T PRK11272          4 RQLLPLFGALFALYIIWGSTYLVIRIGVE--SWPPLMMAGVRFLIAGILLL-AFLLLRG--HP--L--P-TLRQWLNAAL   73 (292)
T ss_pred             HHHHHHHHHHHHHHHHHhhHHHHHHHHhc--cCCHHHHHHHHHHHHHHHHH-HHHHHhC--CC--C--C-cHHHHHHHHH
Confidence            33344444455544444567777885444  4566666666655 444444 3433321  11  0  1 1222333445


Q ss_pred             HHHHH-HHhHHHHHhhh-cccchhhHHHHHhhhhHHHHHHHHHHhccccchHHHHHHHHHHHHHHHHhccCCCCCCCCCC
Q 043307          118 FGLLL-TGDNMMYSYGL-LYLPLSTYSLLCATQLAFNAFFSFFLNSQKFTPFIFNSLVLLTISATLLAVNADSENTSGVS  195 (248)
Q Consensus       118 lGvl~-a~~n~lYa~gl-~yLp~ST~sLi~sTqL~FTAiFs~li~~~kfT~~~insvvLlt~g~~Ll~l~~~s~~~~~~~  195 (248)
                      .|++. ...+.++.++. .+.|++..+++.+++.+|+++++.+ +|||+++.++.++++..+|..++..+++.       
T Consensus        74 ~g~~~~~~~~~~~~~~~~~~~~a~~a~~l~~~~Pl~~~lla~~-~~e~~~~~~~~~~~la~~Gv~ll~~~~~~-------  145 (292)
T PRK11272         74 IGLLLLAVGNGMVTVAEHQNVPSGIAAVVVATVPLFTLCFSRL-FGIRTRKLEWLGIAIGLAGIVLLNSGGNL-------  145 (292)
T ss_pred             HHHHHHHHHHHHHHHHHHccCcHHHHHHHHHHHHHHHHHHHHH-hcccCchhHHHHHHHHHHhHHHHhcCccc-------
Confidence            56553 45667777888 9999999999999999999999986 69999999999999999998886433211       


Q ss_pred             CcccchhHHHHHHHHHHHHHHHHHH
Q 043307          196 KGNYVIGFLCTLGASATYSLYLSLL  220 (248)
Q Consensus       196 ~~~y~lGf~~tL~Asalygl~l~L~  220 (248)
                       +....|.++.+.|+..|+++....
T Consensus       146 -~~~~~G~l~~l~a~~~~a~~~~~~  169 (292)
T PRK11272        146 -SGNPWGAILILIASASWAFGSVWS  169 (292)
T ss_pred             -ccchHHHHHHHHHHHHHHHHHHHH
Confidence             123579999999999999987665

>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]

Probab=98.68  E-value=2.4e-06  Score=74.10  Aligned_cols=102  Identities=20%  Similarity=0.265  Sum_probs=85.7

Q ss_pred             HHHHHHHHHHHHhHHHHHhhhcccchhhHHHHHhhhhHHHHHHHH-HHhccccchHHHHHHHHHHHHHHHHhccCCCCCC
Q 043307          113 CLYVAFGLLLTGDNMMYSYGLLYLPLSTYSLLCATQLAFNAFFSF-FLNSQKFTPFIFNSLVLLTISATLLAVNADSENT  191 (248)
Q Consensus       113 ~~~~~lGvl~a~~n~lYa~gl~yLp~ST~sLi~sTqL~FTAiFs~-li~~~kfT~~~insvvLlt~g~~Ll~l~~~s~~~  191 (248)
                      ...+..++..+..+.+|..+..|+|+++.+.+.++...|+++++. ++.+||+++.++.++++..+|..++..++..+..
T Consensus        71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Gv~lv~~~~~~~~~  150 (292)
T COG0697          71 LLLLLALLGLALPFLLLFLALKYTSASVASLIIGLLPLFTALLAVLLLLGERLSLLQILGILLALAGVLLILLGGGGGGI  150 (292)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHheecCCCcchh
Confidence            344555677788889999999999999999999999999999996 7779999999999999999999997654433221


Q ss_pred             CCCCCcccchhHHHHHHHHHHHHHHHHHH
Q 043307          192 SGVSKGNYVIGFLCTLGASATYSLYLSLL  220 (248)
Q Consensus       192 ~~~~~~~y~lGf~~tL~Asalygl~l~L~  220 (248)
                      .      +..|.++.+.+++.++++....
T Consensus       151 ~------~~~g~~~~l~a~~~~a~~~~~~  173 (292)
T COG0697         151 L------SLLGLLLALAAALLWALYTALV  173 (292)
T ss_pred             H------HHHHHHHHHHHHHHHHHHHHHH
Confidence            1      6899999999999999876666

>PRK15430 putative chloramphenical resistance permease RarD; Provisional

Probab=98.68  E-value=5.9e-07  Score=81.56  Aligned_cols=93  Identities=11%  Similarity=0.161  Sum_probs=78.5

Q ss_pred             HHHHHHHHHHhHHHHHhhhcccchhhHHHHHhhhhHHHHHHHHHHhccccchHHHHHHHHHHHHHHHHhccCCCCCCCCC
Q 043307          115 YVAFGLLLTGDNMMYSYGLLYLPLSTYSLLCATQLAFNAFFSFFLNSQKFTPFIFNSLVLLTISATLLAVNADSENTSGV  194 (248)
Q Consensus       115 ~~~lGvl~a~~n~lYa~gl~yLp~ST~sLi~sTqL~FTAiFs~li~~~kfT~~~insvvLlt~g~~Ll~l~~~s~~~~~~  194 (248)
                      .+..++..+.++.+|.+|++|+|++..+++.++..+|++++++++.|||+++.++.++++..+|.+++.-+ +++.    
T Consensus        76 ~~~~~~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E~~~~~~~~g~~l~~~Gv~li~~~-~~~~----  150 (296)
T PRK15430         76 LAVSAVLIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGERFRRMQWLAVILAICGVLVQLWT-FGSL----  150 (296)
T ss_pred             HHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHH-cCCc----
Confidence            33556778889999999999999999999999999999999999999999999999999999999986422 1110    


Q ss_pred             CCcccchhHHHHHHHHHHHHHHHHHH
Q 043307          195 SKGNYVIGFLCTLGASATYSLYLSLL  220 (248)
Q Consensus       195 ~~~~y~lGf~~tL~Asalygl~l~L~  220 (248)
                              .+..++|++.|+++..+.
T Consensus       151 --------~~~~l~aa~~~a~~~i~~  168 (296)
T PRK15430        151 --------PIIALGLAFSFAFYGLVR  168 (296)
T ss_pred             --------cHHHHHHHHHHHHHHHHH
Confidence                    145778899999988665

>PRK11453 O-acetylserine/cysteine export protein; Provisional

Probab=98.68  E-value=1.7e-06  Score=78.61  Aligned_cols=98  Identities=15%  Similarity=0.235  Sum_probs=78.4

Q ss_pred             HhHHHHHhhhcc-cchhhHHHHHhhhhHHHHHHHHHHhccccchHHHHHHHHHHHHHHHHhccCCCCCCCCCCCcccchh
Q 043307          124 GDNMMYSYGLLY-LPLSTYSLLCATQLAFNAFFSFFLNSQKFTPFIFNSLVLLTISATLLAVNADSENTSGVSKGNYVIG  202 (248)
Q Consensus       124 ~~n~lYa~gl~y-Lp~ST~sLi~sTqL~FTAiFs~li~~~kfT~~~insvvLlt~g~~Ll~l~~~s~~~~~~~~~~y~lG  202 (248)
                      .+..+|..++.| +|++..+++.+++.++++++++++.|||+++.++.++++.++|..++..++..+      ......|
T Consensus        71 ~~~~~~~~~~~~~~~a~~a~~l~~~~pi~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~ll~~~~~~~------~~~~~~G  144 (299)
T PRK11453         71 GQFAFLFCAINFGMPAGLASLVLQAQAFFTIVLGAFTFGERLQGKQLAGIALAIFGVLVLIEDSLNG------QHVAMLG  144 (299)
T ss_pred             HHHHHHHHHHHhcCCHHHHHHHHHhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHhHHHhccccCCC------cchhHHH
Confidence            344455578877 799999999999999999999999999999999999999999998875332111      1113579


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhhccc
Q 043307          203 FLCTLGASATYSLYLSLLQLSFEKVIKKE  231 (248)
Q Consensus       203 f~~tL~Asalygl~l~L~ql~f~Kv~k~~  231 (248)
                      .++++.|++.++++.-+.    +|..++.
T Consensus       145 ~~l~l~aal~~a~~~v~~----~~~~~~~  169 (299)
T PRK11453        145 FMLTLAAAFSWACGNIFN----KKIMSHS  169 (299)
T ss_pred             HHHHHHHHHHHHHHHHHH----HHHhccc
Confidence            999999999999988887    6655443

>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein

Probab=98.61  E-value=2.5e-06  Score=76.70  Aligned_cols=99  Identities=9%  Similarity=0.077  Sum_probs=81.8

Q ss_pred             HHHHHHHHHHHhHHHHHhhhcccchhhHHHHHhhhhHHHHHHHHHHhccccchHHHHHHHHHHHHHHHHhccCCCCCCCC
Q 043307          114 LYVAFGLLLTGDNMMYSYGLLYLPLSTYSLLCATQLAFNAFFSFFLNSQKFTPFIFNSLVLLTISATLLAVNADSENTSG  193 (248)
Q Consensus       114 ~~~~lGvl~a~~n~lYa~gl~yLp~ST~sLi~sTqL~FTAiFs~li~~~kfT~~~insvvLlt~g~~Ll~l~~~s~~~~~  193 (248)
                      ..+..|+..+....++..|+++.|++..+.+.+++.+++++++.++.|||+++.++.++++..+|..++..+++. +   
T Consensus        65 ~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~g~~~~~~Gv~ll~~~~~~-~---  140 (281)
T TIGR03340        65 LLAISAVANMVYFLGLAQAYHHADVGLVYPLARSSPLLVAIWATLTLGETLSPLAWLGILIITLGLLVLGLSRFA-Q---  140 (281)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhcCChhhhhhHHhhhHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhccccc-c---
Confidence            344456667788888889999999999999999999999999999999999999999999999999987643211 1   


Q ss_pred             CCCcccchhHHHHHHHHHHHHHHHHHH
Q 043307          194 VSKGNYVIGFLCTLGASATYSLYLSLL  220 (248)
Q Consensus       194 ~~~~~y~lGf~~tL~Asalygl~l~L~  220 (248)
                          ....|+.+.+.+++.|+++..+.
T Consensus       141 ----~~~~g~~~~l~aal~~a~~~i~~  163 (281)
T TIGR03340       141 ----HRRKAYAWALAAALGTAIYSLSD  163 (281)
T ss_pred             ----cchhHHHHHHHHHHHHHHhhhhc
Confidence                12357778899999999977654

This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.

>PF13536 EmrE: Multidrug resistance efflux transporter

Probab=98.58  E-value=1.9e-07  Score=73.70  Aligned_cols=74  Identities=20%  Similarity=0.373  Sum_probs=65.6

Q ss_pred             HHHHHHHHH-HhHHHHHhhhcccchhhHHHHHhhhhHHHHHHHHHHhccccchHHHHHHHHHHHHHHHHhccCCCC
Q 043307          115 YVAFGLLLT-GDNMMYSYGLLYLPLSTYSLLCATQLAFNAFFSFFLNSQKFTPFIFNSLVLLTISATLLAVNADSE  189 (248)
Q Consensus       115 ~~~lGvl~a-~~n~lYa~gl~yLp~ST~sLi~sTqL~FTAiFs~li~~~kfT~~~insvvLlt~g~~Ll~l~~~s~  189 (248)
                      .+..|++.. .++.+|.+|++|.| +..+.+.++..+|+++++.++.|||+++..+.++++.++|.++++.++.++
T Consensus        37 ~~~~g~~~~~~~~~~~~~a~~~~~-~~v~~i~~~~pi~~~ll~~~~~~er~~~~~~~a~~l~~~Gv~li~~~~~~~  111 (113)
T PF13536_consen   37 LILAGLLGFGVAYLLFFYALSYAP-ALVAAIFSLSPIFTALLSWLFFKERLSPRRWLAILLILIGVILIAWSDLTG  111 (113)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhhhhccc
Confidence            444466665 88999999999999 588899999999999999999999999999999999999999998877543

>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown

Probab=98.55  E-value=9e-07  Score=67.75  Aligned_cols=118  Identities=16%  Similarity=0.168  Sum_probs=86.8

Q ss_pred             HHHHHHHHHhcCCCchhHHHHHhhhCchhhhhhhhhcccCCCCCCCCCCchHHHHHHHHHHHHH-HHHhHHHHHhhhccc
Q 043307           58 ATLLGRLYYDKGGNSKWMATFVQSAGFPILLPVLCCFSNGSRSTNKTDPKISTLVCLYVAFGLL-LTGDNMMYSYGLLYL  136 (248)
Q Consensus        58 ~~LL~r~Yy~~gG~s~W~~t~vqtagfPlll~~~~~~~~~~~~~~~~~p~~~~l~~~~~~lGvl-~a~~n~lYa~gl~yL  136 (248)
                      ...+.|.-.++ -+..++..+-...+.+ +++...+...++ .   . ...++.....+..|++ .+..+.+|.+|++++
T Consensus         6 ~~~~~k~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-~---~-~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~   78 (126)
T PF00892_consen    6 YSVFSKKLLKK-ISPLSITFWRFLIAGI-LLILLLILGRKP-F---K-NLSPRQWLWLLFLGLLGTALAYLLYFYALKYI   78 (126)
T ss_pred             HHHHHHHHhcc-CCHHHHHHHHHHHHHH-HHHHHHhhcccc-c---c-CCChhhhhhhhHhhccceehHHHHHHHHHHhc
Confidence            34455555555 5566777777777777 554444433221 1   1 1122333344555656 688999999999999


Q ss_pred             chhhHHHHHhhhhHHHHHHHHHHhccccchHHHHHHHHHHHHHHHH
Q 043307          137 PLSTYSLLCATQLAFNAFFSFFLNSQKFTPFIFNSLVLLTISATLL  182 (248)
Q Consensus       137 p~ST~sLi~sTqL~FTAiFs~li~~~kfT~~~insvvLlt~g~~Ll  182 (248)
                      |++..+.+..+++++++++++++.+||+++.++.++++..+|.+++
T Consensus        79 ~~~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~g~~l~~~g~~l~  124 (126)
T PF00892_consen   79 SASIVSILQYLSPVFAAILGWLFLGERPSWRQIIGIILIIIGVVLI  124 (126)
T ss_pred             chhHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999999999999999999999999998875

Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane

>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein

Probab=98.54  E-value=7.4e-07  Score=81.37  Aligned_cols=112  Identities=17%  Similarity=0.190  Sum_probs=95.9

Q ss_pred             HHHHHHHHHHHHHHHHhHHHHHhhhcccchhhHHHHHh-hhhHHHHHHHHHHhccccchHH----HHHHHHHHHHHHHHh
Q 043307          109 STLVCLYVAFGLLLTGDNMMYSYGLLYLPLSTYSLLCA-TQLAFNAFFSFFLNSQKFTPFI----FNSLVLLTISATLLA  183 (248)
Q Consensus       109 ~~l~~~~~~lGvl~a~~n~lYa~gl~yLp~ST~sLi~s-TqL~FTAiFs~li~~~kfT~~~----insvvLlt~g~~Ll~  183 (248)
                      +++....+..|++++..|+.|-.+.+|+.+|+...+.+ .|.++..+++.++.|||.|+.+    +.++++..+|..+++
T Consensus        56 ~~~~~~g~l~G~~w~ig~~~~~~ai~~~gva~a~~i~~~~~~v~~~l~~~~~f~e~~t~~~~~~~~~g~~l~l~G~~l~~  135 (290)
T TIGR00776        56 LSIFLVGLLSGAFWALGQINQFKSMRYMGVSKTMPISTGFQLVGGTLFGVIVFGEWSTSIQTLLGLLALILIIIGVYLTS  135 (290)
T ss_pred             cHHHHHHHHHHHHHHhhhhhHHHHHHHHhHHHHhHHHHHHHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHhHheEE
Confidence            57888899999999999999999999999999999999 9999999999999999999999    999999999999876


Q ss_pred             ccCCCCCCCCCCCcccchhHHHHHHHHHHHHHHHHHHH
Q 043307          184 VNADSENTSGVSKGNYVIGFLCTLGASATYSLYLSLLQ  221 (248)
Q Consensus       184 l~~~s~~~~~~~~~~y~lGf~~tL~Asalygl~l~L~q  221 (248)
                      .+++++..+ .++.++..|.++.+.+++.|+++....+
T Consensus       136 ~~~~~~~~~-~~~~~~~~Gi~~~l~sg~~y~~~~~~~~  172 (290)
T TIGR00776       136 RSKDKSAGI-KSEFNFKKGILLLLMSTIGYLVYVVVAK  172 (290)
T ss_pred             ecccccccc-ccccchhhHHHHHHHHHHHHHHHHHHHH
Confidence            654332211 1112345699999999999999998884

These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.

>PRK11689 aromatic amino acid exporter; Provisional

Probab=98.53  E-value=2.6e-06  Score=77.36  Aligned_cols=109  Identities=11%  Similarity=0.146  Sum_probs=81.4

Q ss_pred             HHHHHHhHHHHHhhh----cccchhhHHHHHhhhhHHHHHHHHHHhccccchHHHHHHHHHHHHHHHHhccCCCCCCCC-
Q 043307          119 GLLLTGDNMMYSYGL----LYLPLSTYSLLCATQLAFNAFFSFFLNSQKFTPFIFNSLVLLTISATLLAVNADSENTSG-  193 (248)
Q Consensus       119 Gvl~a~~n~lYa~gl----~yLp~ST~sLi~sTqL~FTAiFs~li~~~kfT~~~insvvLlt~g~~Ll~l~~~s~~~~~-  193 (248)
                      |+..+..+.++..|.    ++.|++..+++.+++.+|+++++.++.|||+++.++.++++..+|.+++..++.+....+ 
T Consensus        68 ~l~~~~~~~~~~~a~~~~~~~~~a~~a~~l~~~~Pi~~~ll~~~~~~e~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~  147 (295)
T PRK11689         68 GLLFVSYEICLALSLGYANTRRQAIEVGMVNYLWPSLTILFAVLFNGQKANWLLIPGLLLALAGVAWVLGGDNGLSLAEL  147 (295)
T ss_pred             hHHHHHHHHHHHHHHHHhhccccchHHHHHHHHhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhHhheecCCccchhhhh
Confidence            334555555554554    467888999999999999999999999999999999999999999998764432111100 


Q ss_pred             -CCCcccchhHHHHHHHHHHHHHHHHHHHHHHHHhhccc
Q 043307          194 -VSKGNYVIGFLCTLGASATYSLYLSLLQLSFEKVIKKE  231 (248)
Q Consensus       194 -~~~~~y~lGf~~tL~Asalygl~l~L~ql~f~Kv~k~~  231 (248)
                       .+......|.++.+.|++.|+++..+.    ||..++.
T Consensus       148 ~~~~~~~~~G~~~~l~aa~~~A~~~v~~----k~~~~~~  182 (295)
T PRK11689        148 INNIASNPLSYGLAFIGAFIWAAYCNVT----RKYARGK  182 (295)
T ss_pred             hhccccChHHHHHHHHHHHHHHHHHHHH----hhccCCC
Confidence             011234579999999999999998888    7665443

>PRK10532 threonine and homoserine efflux system; Provisional

Probab=98.21  E-value=9.9e-05  Score=66.97  Aligned_cols=101  Identities=22%  Similarity=0.288  Sum_probs=73.4

Q ss_pred             HHHHHHHHHhHHHHHhhhcccchhhHHHHHhhhhHHHHHHHHHHhccccchHHHHHHHHHHHHHHHHhccCCCCCCCCCC
Q 043307          116 VAFGLLLTGDNMMYSYGLLYLPLSTYSLLCATQLAFNAFFSFFLNSQKFTPFIFNSLVLLTISATLLAVNADSENTSGVS  195 (248)
Q Consensus       116 ~~lGvl~a~~n~lYa~gl~yLp~ST~sLi~sTqL~FTAiFs~li~~~kfT~~~insvvLlt~g~~Ll~l~~~s~~~~~~~  195 (248)
                      +..|++.+..+.++.+|++|+|++..+.+..|+++|+++++    +||..+.++  +.+..+|..++..+ +.+.     
T Consensus        75 ~~~g~~~~~~~~~~~~al~~~~~~~a~~l~~t~Pi~~~ll~----~~~~~~~~~--~~i~~~Gv~li~~~-~~~~-----  142 (293)
T PRK10532         75 LFYGVSLGGMNYLFYLSIQTVPLGIAVALEFTGPLAVALFS----SRRPVDFVW--VVLAVLGLWFLLPL-GQDV-----  142 (293)
T ss_pred             HHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHh----cCChHHHHH--HHHHHHHHheeeec-CCCc-----
Confidence            34566678888889899999999999999999999999887    356555554  44556776664322 1111     


Q ss_pred             CcccchhHHHHHHHHHHHHHHHHHHHHHHHHhhcccc
Q 043307          196 KGNYVIGFLCTLGASATYSLYLSLLQLSFEKVIKKET  232 (248)
Q Consensus       196 ~~~y~lGf~~tL~Asalygl~l~L~ql~f~Kv~k~~t  232 (248)
                      .+....|.++.++|++.|+++.-+.    +|..++.+
T Consensus       143 ~~~~~~G~ll~l~aa~~~a~~~v~~----r~~~~~~~  175 (293)
T PRK10532        143 SHVDLTGAALALGAGACWAIYILSG----QRAGAEHG  175 (293)
T ss_pred             ccCChHHHHHHHHHHHHHHHHHHHH----HHHhccCC
Confidence            1123579999999999999988888    66655443

>KOG1443 consensus Predicted integral membrane protein [Function unknown]

Probab=98.03  E-value=4.2e-05  Score=71.93  Aligned_cols=119  Identities=20%  Similarity=0.318  Sum_probs=98.5

Q ss_pred             HHHHHHHhHHHHHhhhcccchhhHHHHHhhhhHHHHHHHHHHhccccchHHHHHHHHHHHHHHHHhccCCCCCCCCCCCc
Q 043307          118 FGLLLTGDNMMYSYGLLYLPLSTYSLLCATQLAFNAFFSFFLNSQKFTPFIFNSLVLLTISATLLAVNADSENTSGVSKG  197 (248)
Q Consensus       118 lGvl~a~~n~lYa~gl~yLp~ST~sLi~sTqL~FTAiFs~li~~~kfT~~~insvvLlt~g~~Ll~l~~~s~~~~~~~~~  197 (248)
                      .|+-.+.|=-+-++++.|.|+|-|+.+=++.++|-.+|+.+.--||+.+.-...+.+.-+|..+....++.         
T Consensus        90 talata~DIGLSN~sl~yVtlSlYTM~KSSsi~FIllFs~if~lEk~~w~L~l~v~lI~~Glflft~KsTq---------  160 (349)
T KOG1443|consen   90 TALATALDIGLSNWSLEYVTLSLYTMTKSSSILFILLFSLIFKLEKFRWALVLIVLLIAVGLFLFTYKSTQ---------  160 (349)
T ss_pred             hhhhhhcccccccceeeeeeeeeeeeccccHHHHHHHHHHHHHhHHHHHHHHHHHHHHhhheeEEEecccc---------
Confidence            35566677778889999999999999999999999999999999999888777777777777765544322         


Q ss_pred             ccchhHHHHHHHHHHHHHHHHHHHHHHHHh--hcccceeeehhhhhhhhh
Q 043307          198 NYVIGFLCTLGASATYSLYLSLLQLSFEKV--IKKETFSVVMDMQIYSSF  245 (248)
Q Consensus       198 ~y~lGf~~tL~Asalygl~l~L~ql~f~Kv--~k~~t~~~vlemQi~~sl  245 (248)
                      -.+.||.+.++||++.|+=-+..|...+|.  -++..+.+.-.+|-.|++
T Consensus       161 f~i~Gf~lv~~aS~~sGlRW~~tQ~ll~~~~~~~~~P~~ti~~l~p~M~~  210 (349)
T KOG1443|consen  161 FNIEGFFLVLAASLLSGLRWAFTQMLLRNQPSAKRNPIDTIFHLQPWMSI  210 (349)
T ss_pred             eeehhHHHHHHHHHhhhhhHHHHHHHHhcCccccCCCeeeHHHhhhHHHH
Confidence            468899999999999999999999998874  367777777778877653

>PLN00411 nodulin MtN21 family protein; Provisional

Probab=97.89  E-value=0.00046  Score=65.52  Aligned_cols=77  Identities=6%  Similarity=0.005  Sum_probs=65.0

Q ss_pred             HHHHHHHHHHHHHhHHHHHhhhcccchhhHHHHHhhhhHHHHHHHHHHhccccchHHHHHHHHHHHHHHHHhccCCCCC
Q 043307          112 VCLYVAFGLLLTGDNMMYSYGLLYLPLSTYSLLCATQLAFNAFFSFFLNSQKFTPFIFNSLVLLTISATLLAVNADSEN  190 (248)
Q Consensus       112 ~~~~~~lGvl~a~~n~lYa~gl~yLp~ST~sLi~sTqL~FTAiFs~li~~~kfT~~~insvvLlt~g~~Ll~l~~~s~~  190 (248)
                      ..+|.++  ..+..-.++++++++++++..++....+++|++++++++.+|++++.++.+.++...|..+...+...|.
T Consensus       258 ~i~y~~i--~t~lay~lw~~~v~~~ga~~as~~~~L~PV~a~llg~l~LgE~lt~~~~iG~~LIl~Gv~l~~~~~~~~~  334 (358)
T PLN00411        258 TIVTMAI--ITSVYYVIHSWTVRHKGPLYLAIFKPLSILIAVVMGAIFLNDSLYLGCLIGGILITLGFYAVMWGKANEE  334 (358)
T ss_pred             HHHHHHH--HHHHHHHHHHHHHhccCchHHHHHHhHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHhhhhhhh
Confidence            3445433  3456667888999999999999999999999999999999999999999999999999998776554443

>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional

Probab=97.85  E-value=0.0002  Score=57.39  Aligned_cols=65  Identities=9%  Similarity=0.106  Sum_probs=61.1

Q ss_pred             HHHHHhHHHHHhhhcccchhhHHHHHhhhhHHHHHHHHHHhccccchHHHHHHHHHHHHHHHHhc
Q 043307          120 LLLTGDNMMYSYGLLYLPLSTYSLLCATQLAFNAFFSFFLNSQKFTPFIFNSLVLLTISATLLAV  184 (248)
Q Consensus       120 vl~a~~n~lYa~gl~yLp~ST~sLi~sTqL~FTAiFs~li~~~kfT~~~insvvLlt~g~~Ll~l  184 (248)
                      +.++...++++.+++.+|.|...-+-++..+++++.++++.+||+|+.++.++++..+|.++++.
T Consensus        45 ~~~~l~~~~~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~ls~~~~~Gi~lii~Gv~~i~~  109 (111)
T PRK15051         45 ACLGLAMVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSPRHWCGVAFIIGGIVILGS  109 (111)
T ss_pred             HHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhc
Confidence            56788889999999999999999999999999999999999999999999999999999998764

>PRK10532 threonine and homoserine efflux system; Provisional

Probab=97.80  E-value=0.0012  Score=60.01  Aligned_cols=70  Identities=16%  Similarity=0.142  Sum_probs=61.2

Q ss_pred             HHHHH-HHHhHHHHHhhhcccchhhHHHHHhhhhHHHHHHHHHHhccccchHHHHHHHHHHHHHHHHhccC
Q 043307          117 AFGLL-LTGDNMMYSYGLLYLPLSTYSLLCATQLAFNAFFSFFLNSQKFTPFIFNSLVLLTISATLLAVNA  186 (248)
Q Consensus       117 ~lGvl-~a~~n~lYa~gl~yLp~ST~sLi~sTqL~FTAiFs~li~~~kfT~~~insvvLlt~g~~Ll~l~~  186 (248)
                      .+|+. ......+|.+++++.|+++.+++...|++|++++++++.+|++++.++.+.++...|..+.....
T Consensus       213 ~lgv~~t~~~~~l~~~~~~~~~a~~as~~~~l~Pv~a~l~~~l~lgE~~~~~~~iG~~lIl~~~~~~~~~~  283 (293)
T PRK10532        213 AVAILSTALPYSLEMIALTRLPTRTFGTLMSMEPALAAVSGMIFLGETLTLIQWLALGAIIAASMGSTLTI  283 (293)
T ss_pred             HHHHHHHHHHHHHHHHHHHhcChhHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHhcC
Confidence            44555 44566699999999999999999999999999999999999999999999999999988865443

>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter

Probab=97.80  E-value=0.00088  Score=58.46  Aligned_cols=116  Identities=16%  Similarity=0.188  Sum_probs=75.9

Q ss_pred             hHHHHHHHHHhcCCCch-hHHHHHhhhCchhhhhhhhhcccCCCCCCCCCCchHHHHHHHHHHHHH-HHHhHHHHHhhhc
Q 043307           57 AATLLGRLYYDKGGNSK-WMATFVQSAGFPILLPVLCCFSNGSRSTNKTDPKISTLVCLYVAFGLL-LTGDNMMYSYGLL  134 (248)
Q Consensus        57 ~~~LL~r~Yy~~gG~s~-W~~t~vqtagfPlll~~~~~~~~~~~~~~~~~p~~~~l~~~~~~lGvl-~a~~n~lYa~gl~  134 (248)
                      ....+.|....+-+... .+..+.-..|.++++|..+... +  .   ..+ .++....-+.+|++ ......+|.++.+
T Consensus       142 ~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~--~---~~~-~~~~~~~~~~~~~~~~~~~~~~~~~a~~  214 (260)
T TIGR00950       142 LGTVLYKRLVKKEGPELLQFTGWVLLLGALLLLPFAWFLG-P--N---PQA-LSLQWGALLYLGLIGTALAYFLWNKGLT  214 (260)
T ss_pred             HHHHHHhHHhhcCCchHHHHHHHHHHHHHHHHHHHHHhcC-C--C---CCc-chHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            44455555554333322 3333444555555554444321 1  1   111 11222222333443 4567788999999


Q ss_pred             ccchhhHHHHHhhhhHHHHHHHHHHhccccchHHHHHHHHHHHHH
Q 043307          135 YLPLSTYSLLCATQLAFNAFFSFFLNSQKFTPFIFNSLVLLTISA  179 (248)
Q Consensus       135 yLp~ST~sLi~sTqL~FTAiFs~li~~~kfT~~~insvvLlt~g~  179 (248)
                      ++|+++.+.+..+++++++++++++.+||+++.++.+.++...|.
T Consensus       215 ~~~~~~~s~~~~~~pv~~~ll~~~~~~E~~~~~~~~G~~li~~g~  259 (260)
T TIGR00950       215 LVDPSAASILALAEPLVALLLGLLILGETLSLPQLIGGALIIAAV  259 (260)
T ss_pred             cCCchHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhc
Confidence            999999999999999999999999999999999999999988774

>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein

Probab=97.78  E-value=0.00029  Score=64.40  Aligned_cols=121  Identities=16%  Similarity=0.165  Sum_probs=90.0

Q ss_pred             ccchHHHHHHHHHhcCCCchhHHHHHhhhCchhhhhhhhhcccCCCCCCCCCCchHHHHHHHHHHHHHHHHhHHHHHhhh
Q 043307           54 GQSAATLLGRLYYDKGGNSKWMATFVQSAGFPILLPVLCCFSNGSRSTNKTDPKISTLVCLYVAFGLLLTGDNMMYSYGL  133 (248)
Q Consensus        54 G~~~~~LL~r~Yy~~gG~s~W~~t~vqtagfPlll~~~~~~~~~~~~~~~~~p~~~~l~~~~~~lGvl~a~~n~lYa~gl  133 (248)
                      +.+...+..|..    +-++|-.++.|..|..+--..++..+ ++.     +|..++.....+..|++++..+.+|..|.
T Consensus       163 ~y~~~~~~~~~~----~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~-----~~~~~~~~~~~~~~Gi~~~ia~~~y~~~~  232 (290)
T TIGR00776       163 GYLVYVVVAKAF----GVDGLSVLLPQAIGMVIGGIIFNLGH-ILA-----KPLKKYAILLNILPGLMWGIGNFFYLFSA  232 (290)
T ss_pred             HHHHHHHHHHHc----CCCcceehhHHHHHHHHHHHHHHHHH-hcc-----cchHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence            334445555532    25567677777775554333332222 111     23344455556669999999999999999


Q ss_pred             c-ccchhhHHHHHhhhhHHHHHHHHHHhccccchHHH----HHHHHHHHHHHHHhc
Q 043307          134 L-YLPLSTYSLLCATQLAFNAFFSFFLNSQKFTPFIF----NSLVLLTISATLLAV  184 (248)
Q Consensus       134 ~-yLp~ST~sLi~sTqL~FTAiFs~li~~~kfT~~~i----nsvvLlt~g~~Ll~l  184 (248)
                      . ++++++.+.+.+...+.+.++++++.+|++++.++    .+.++...|+.+.++
T Consensus       233 ~~~~~~~~~~~ls~~~pvia~~~~v~~l~E~~~~~~~~~~~iG~~lIi~~~~l~~~  288 (290)
T TIGR00776       233 QPKVGVATSFSLSQLGVIISTLGGILILGEKKTKREMIAISVGIILIIIAANILGI  288 (290)
T ss_pred             ccccchhhHHHHHHHHHHHHHHHHHHHhccCCCcceeehhHHHHHHHHHHHHHHhc
Confidence            9 99999999999999999999999999999999999    999999999988765

These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.

>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]

Probab=97.73  E-value=1.8e-05  Score=73.61  Aligned_cols=141  Identities=16%  Similarity=0.148  Sum_probs=84.9

Q ss_pred             hhhhhhcccchhHHHHHHHHHHHHhccchHHHHHHHHHhcCCCchhHHHHHhhhCchhhhhhhh-hcccCCCCCCCCCCc
Q 043307           29 QWRFLKLKHYKWWLRVILYVVCLLVGQSAATLLGRLYYDKGGNSKWMATFVQSAGFPILLPVLC-CFSNGSRSTNKTDPK  107 (248)
Q Consensus        29 ~~~~~~~~~~~~w~lv~~~~~~l~~G~~~~~LL~r~Yy~~gG~s~W~~t~vqtagfPlll~~~~-~~~~~~~~~~~~~p~  107 (248)
                      +.+-.+.|+...-++..+++++.+.--.+...+.+-=-+..-.|    -++|      ++|.+. ..+.+..- -.+.+ 
T Consensus        28 ~qri~~d~p~~gl~l~~vs~ff~~~~vv~t~~~e~~p~e~a~~r----~l~~------mlit~pcliy~~~~v-~gp~g-   95 (346)
T KOG4510|consen   28 LQRISKDKPNLGLLLLTVSYFFNSCMVVSTKVLENDPMELASFR----LLVR------MLITYPCLIYYMQPV-IGPEG-   95 (346)
T ss_pred             hhHhhcCCCccCceehhhHHHHhhHHHhhhhhhccChhHhhhhh----hhhe------hhhhheEEEEEeeee-ecCCC-
Confidence            34455558888888998987777666555555443333333333    0111      111111 11111100 00111 


Q ss_pred             hHHHHHHHHHHHHHHHHhHHHHHhhhcccchhhHHHHHhhhhHHHHHHHHHHhccccchHHHHHHHHHHHHHHHHhc
Q 043307          108 ISTLVCLYVAFGLLLTGDNMMYSYGLLYLPLSTYSLLCATQLAFNAFFSFFLNSQKFTPFIFNSLVLLTISATLLAV  184 (248)
Q Consensus       108 ~~~l~~~~~~lGvl~a~~n~lYa~gl~yLp~ST~sLi~sTqL~FTAiFs~li~~~kfT~~~insvvLlt~g~~Ll~l  184 (248)
                      .++.+++=-+.|.  .+--.+| |++.|+|.+-.++|.-+...||++|++.++|||+|++-....++...|++|+.-
T Consensus        96 ~R~~LiLRg~mG~--tgvmlmy-ya~~~mslaDA~vItFssPvft~ifaw~~LkE~~t~~eaL~s~itl~GVVLIvR  169 (346)
T KOG4510|consen   96 KRKWLILRGFMGF--TGVMLMY-YALMYMSLADAVVITFSSPVFTIIFAWAFLKEPFTKFEALGSLITLLGVVLIVR  169 (346)
T ss_pred             cEEEEEeehhhhh--hHHHHHH-HHHhhcchhheEEEEecChHHHHHHHHHHHcCCCcHHHHHHHHHhhheEEEEec
Confidence            1111111111121  1112456 899999999999999999999999999999999999999999999999888753

>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins

Probab=97.69  E-value=0.0012  Score=53.24  Aligned_cols=125  Identities=19%  Similarity=0.160  Sum_probs=96.6

Q ss_pred             hHHHHHHHHHhc------CCCchhHHHHHhhhCchhhhhhhhhcccCCCCC----CCC--CCchHHHHHHHHHHHHHHHH
Q 043307           57 AATLLGRLYYDK------GGNSKWMATFVQSAGFPILLPVLCCFSNGSRST----NKT--DPKISTLVCLYVAFGLLLTG  124 (248)
Q Consensus        57 ~~~LL~r~Yy~~------gG~s~W~~t~vqtagfPlll~~~~~~~~~~~~~----~~~--~p~~~~l~~~~~~lGvl~a~  124 (248)
                      .-..+.+.++.+      +.+..=+..+.+..++++++|+.++....+...    ...  ....++....-+..|++...
T Consensus        14 l~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   93 (153)
T PF03151_consen   14 LRNVLIKKLLKKVSSNSKKLNPLNLLYYNSPISFIILLPLAFLLEGPQLSSFFSEIFGEELSSDPNFIFLLILSGLLAFL   93 (153)
T ss_pred             HHHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHhhhhhhcchHHHHHHHHHHHHHHHH
Confidence            334455555555      333445778888999999999888764332111    011  01144677777778999999


Q ss_pred             hHHHHHhhhcccchhhHHHHHhhhhHHHHHHHHHHhccccchHHHHHHHHHHHHHHH
Q 043307          125 DNMMYSYGLLYLPLSTYSLLCATQLAFNAFFSFFLNSQKFTPFIFNSLVLLTISATL  181 (248)
Q Consensus       125 ~n~lYa~gl~yLp~ST~sLi~sTqL~FTAiFs~li~~~kfT~~~insvvLlt~g~~L  181 (248)
                      .|+....-+.+..+-|++++...|-+++.+++.++.++++|..++.++++.++|..+
T Consensus        94 ~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~~~~G~~l~~~G~~~  150 (153)
T PF03151_consen   94 YNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPLQIIGIVLALVGVLL  150 (153)
T ss_pred             HHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHHHHHHHHHHHHHHhe
Confidence            999999999999999999999999999999999999999999999999999999765

O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.

>KOG3912 consensus Predicted integral membrane protein [General function prediction only]

Probab=97.69  E-value=0.00073  Score=63.42  Aligned_cols=104  Identities=18%  Similarity=0.258  Sum_probs=80.8

Q ss_pred             HHhHHHHHhhhcccchhhHHHHHhhhhHHHHHHHHHHhccccchHHHHHHHHHHHHHHHHhccCCCCCC-CCCCCcccch
Q 043307          123 TGDNMMYSYGLLYLPLSTYSLLCATQLAFNAFFSFFLNSQKFTPFIFNSLVLLTISATLLAVNADSENT-SGVSKGNYVI  201 (248)
Q Consensus       123 a~~n~lYa~gl~yLp~ST~sLi~sTqL~FTAiFs~li~~~kfT~~~insvvLlt~g~~Ll~l~~~s~~~-~~~~~~~y~l  201 (248)
                      +...+|| .|+.+..+|.|+.+--.-++|+++||.-+++++++..+|.++.....|.+.++..|-.... +-...+.-+.
T Consensus        98 ~gsslm~-vgL~lTsASsfQMlRGaviIFvglfst~~Ln~ti~~~qWl~i~fv~lGlviVg~~d~~~~~~p~~d~s~iit  176 (372)
T KOG3912|consen   98 AGSSLMY-VGLNLTSASSFQMLRGAVIIFVGLFSTMFLNRTITGRQWLGILFVSLGLVIVGSLDVHLVTDPYTDYSSIIT  176 (372)
T ss_pred             hhhHHHH-HHHHHhhHHHHHHhhcchhhhhHHHHHHHHhcccchhhHHHHHHHHhhhheeeeeecccccCCccccccchh
Confidence            4456777 9999999999999999999999999999999999999999999999999887765321111 1122345678


Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHhhccc
Q 043307          202 GFLCTLGASATYSLYLSLLQLSFEKVIKKE  231 (248)
Q Consensus       202 Gf~~tL~Asalygl~l~L~ql~f~Kv~k~~  231 (248)
                      |..+.+.|-...+.-...=    ||.+++.
T Consensus       177 GdllIiiaqiivaiQ~v~E----ek~l~~~  202 (372)
T KOG3912|consen  177 GDLLIIIAQIIVAIQMVCE----EKQLKKS  202 (372)
T ss_pred             hhHHHHHHHHHHHHHHHHH----Hhhhhhc
Confidence            9999999999888744444    4455443

>TIGR00803 nst UDP-galactose transporter

Probab=97.66  E-value=0.00016  Score=62.90  Aligned_cols=107  Identities=18%  Similarity=0.167  Sum_probs=85.4

Q ss_pred             HHHHHHhHHHHHhhhcccchhhHHHHHhhhhHHHHHHHHHHhccccchHHHHHHHHHHHHHHHHhccCCCCCCCCCCCcc
Q 043307          119 GLLLTGDNMMYSYGLLYLPLSTYSLLCATQLAFNAFFSFFLNSQKFTPFIFNSLVLLTISATLLAVNADSENTSGVSKGN  198 (248)
Q Consensus       119 Gvl~a~~n~lYa~gl~yLp~ST~sLi~sTqL~FTAiFs~li~~~kfT~~~insvvLlt~g~~Ll~l~~~s~~~~~~~~~~  198 (248)
                      ..+++.+|.+.-+++.+.+..++... +.|.+.++++...+.+++++..+|-++.++..|......+++.++  ....+.
T Consensus         6 a~~~~~s~~l~~v~l~~~~~~~~~~~-~~~i~~~~l~~~g~l~~~ls~~q~~al~~l~~~~~~~~~~~~~~~--~~~~g~   82 (222)
T TIGR00803         6 IHIIFKQNNLVLIALGNLLAAGKQVT-QLKILSTALMTLGSLVASLGDDQWFSLKLLKLGVAIVQMVQSSAK--TLMFGN   82 (222)
T ss_pred             chHHHHhcchHHHHHhcccccceeee-hHHHHHHHHHHHHHHHhHhhHHHHHHHHHHHHhHeeeecCCCCcc--cccccc
Confidence            35678888888899999999999999 999999999999999999999999999999998887654443321  223346


Q ss_pred             cchhHHHHHHHHHHHHHHHHHHHHHHHHhhcccc
Q 043307          199 YVIGFLCTLGASATYSLYLSLLQLSFEKVIKKET  232 (248)
Q Consensus       199 y~lGf~~tL~Asalygl~l~L~ql~f~Kv~k~~t  232 (248)
                      .+.|..+.++|+...|+    .-.+.||..|+.+
T Consensus        83 ~~~g~~~~l~a~~~~~~----~~~y~e~~~k~~~  112 (222)
T TIGR00803        83 PVVGLSAVLSALLSSGF----AGVYFEKILKDGD  112 (222)
T ss_pred             HHHHHHHHHHHHHHHhh----hHHHHHHcccCCC
Confidence            77888888888888888    5555577766543

NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.

>PRK11689 aromatic amino acid exporter; Provisional

Probab=97.55  E-value=0.0018  Score=58.77  Aligned_cols=68  Identities=10%  Similarity=0.068  Sum_probs=61.6

Q ss_pred             HHHHHHHHhHHHHHhhhcccchhhHHHHHhhhhHHHHHHHHHHhccccchHHHHHHHHHHHHHHHHhc
Q 043307          117 AFGLLLTGDNMMYSYGLLYLPLSTYSLLCATQLAFNAFFSFFLNSQKFTPFIFNSLVLLTISATLLAV  184 (248)
Q Consensus       117 ~lGvl~a~~n~lYa~gl~yLp~ST~sLi~sTqL~FTAiFs~li~~~kfT~~~insvvLlt~g~~Ll~l  184 (248)
                      ..|+..+...++|.++++++|++..+.+...++++++++++++.+|++|+.++.+.++..+|..+.-.
T Consensus       220 ~~~~~t~~~~~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~~~lgE~~~~~~~iG~~lI~~gv~~~~~  287 (295)
T PRK11689        220 LAAAAMGFGYAAWNVGILHGNMTLLATASYFTPVLSAALAALLLSTPLSFSFWQGVAMVTAGSLLCWL  287 (295)
T ss_pred             HHHHHHHHHHHHHHHHHHccCHHHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHhHHHHhh
Confidence            34456777889999999999999999999999999999999999999999999999999999877543

>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]

Probab=97.52  E-value=0.00023  Score=67.00  Aligned_cols=166  Identities=17%  Similarity=0.214  Sum_probs=112.7

Q ss_pred             hHHHHHHHHHHHHhccchHHHHHHHHHhc--CCCchhHHHHHhhhCchhh-hhhhhhcccCCCCCCCCCCchHHHHHHHH
Q 043307           40 WWLRVILYVVCLLVGQSAATLLGRLYYDK--GGNSKWMATFVQSAGFPIL-LPVLCCFSNGSRSTNKTDPKISTLVCLYV  116 (248)
Q Consensus        40 ~w~lv~~~~~~l~~G~~~~~LL~r~Yy~~--gG~s~W~~t~vqtagfPll-l~~~~~~~~~~~~~~~~~p~~~~l~~~~~  116 (248)
                      ++....+++.+=.+. ..+..+.+-|=-+  |++=+|.-|.++.+-=-+. +....+ ..+++...+++....+++    
T Consensus        14 ~~~~~~~~~~~w~~~-~v~~~~~nK~il~~~~f~~p~~lt~~~~~~~~l~~~v~~~l-~~~~~~~~~~~~~~~~ll----   87 (316)
T KOG1441|consen   14 KILRIGIAFAIWYVL-SVGVIILNKYILSKYGFPFPITLTMLHLFCGALALLVIKVL-KLVPPSKISSKLPLRTLL----   87 (316)
T ss_pred             hhHHHHHHHHHHhhh-heeeEEeeHhhhccCCCCCccHHHHHHHHHHHHHHHHHHHh-cCCCCCccccccchHHHH----
Confidence            344555555554444 4555555555555  8888999888854432222 222222 122121111111233443    


Q ss_pred             HHHHHHHHhHHHHHhhhcccchhhHHHHHhhhhHHHHHHHHHHhccccchHHHHHHHHHHHHHHHHhccCCCCCCCCCCC
Q 043307          117 AFGLLLTGDNMMYSYGLLYLPLSTYSLLCATQLAFNAFFSFFLNSQKFTPFIFNSLVLLTISATLLAVNADSENTSGVSK  196 (248)
Q Consensus       117 ~lGvl~a~~n~lYa~gl~yLp~ST~sLi~sTqL~FTAiFs~li~~~kfT~~~insvvLlt~g~~Ll~l~~~s~~~~~~~~  196 (248)
                      -+|+..+....+=+.++.|.|||.+..+=++...||.++++++.++++++....+++....|.++-...+         .
T Consensus        88 pl~~~~~~~~v~~n~Sl~~v~VsF~q~iKa~~P~~tvl~~~~~~~~~~s~~~~lsL~piv~GV~ias~~e---------~  158 (316)
T KOG1441|consen   88 PLGLVFCISHVLGNVSLSYVPVSFYQTIKALMPPFTVLLSVLLLGKTYSSMTYLSLLPIVFGVAIASVTE---------L  158 (316)
T ss_pred             HHHHHHHHHHHhcchhhhccchhHHHHHHhhcchhHHHHHHHHhCCCCcceEEEEEEEeeeeEEEeeecc---------c
Confidence            3456666677777789999999999999999999999999999999999999999998888877733321         2


Q ss_pred             cccchhHHHHHHHHHHHHHHHHHH
Q 043307          197 GNYVIGFLCTLGASATYSLYLSLL  220 (248)
Q Consensus       197 ~~y~lGf~~tL~Asalygl~l~L~  220 (248)
                      +-.+.|+++++++-+.+++-..+.
T Consensus       159 ~fn~~G~i~a~~s~~~~al~~I~~  182 (316)
T KOG1441|consen  159 SFNLFGFISAMISNLAFALRNILS  182 (316)
T ss_pred             cccHHHHHHHHHHHHHHHHHHHHH
Confidence            346899999999999999977777

>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional

Probab=97.36  E-value=0.0053  Score=55.61  Aligned_cols=64  Identities=11%  Similarity=0.111  Sum_probs=59.1

Q ss_pred             HHHhHHHHHhhhcccchhhHHHHHhhhhHHHHHHHHHHhccccchHHHHHHHHHHHHHHHHhcc
Q 043307          122 LTGDNMMYSYGLLYLPLSTYSLLCATQLAFNAFFSFFLNSQKFTPFIFNSLVLLTISATLLAVN  185 (248)
Q Consensus       122 ~a~~n~lYa~gl~yLp~ST~sLi~sTqL~FTAiFs~li~~~kfT~~~insvvLlt~g~~Ll~l~  185 (248)
                      ......+|.++.+++|+++.+++...++++++++++++.+|++|+.++.+.++...|..++...
T Consensus       223 s~~~~~l~~~~~~~~~~~~~s~~~~l~Pi~a~i~~~~~l~E~~t~~~iiG~~lIi~gv~~~~~~  286 (292)
T PRK11272        223 SIIAISAYMYLLRNVRPALATSYAYVNPVVAVLLGTGLGGETLSPIEWLALGVIVFAVVLVTLG  286 (292)
T ss_pred             HHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHH
Confidence            4566789999999999999999999999999999999999999999999999999999887543

>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]

Probab=97.32  E-value=0.00029  Score=63.38  Aligned_cols=104  Identities=22%  Similarity=0.395  Sum_probs=88.6

Q ss_pred             HHHHHHHhHHHHHhhhcccchhhHHHHHhhhhHHHHHHHHHHhccccchHHHHHHHHHHHHHHHHhccCCCCCCCCCCCc
Q 043307          118 FGLLLTGDNMMYSYGLLYLPLSTYSLLCATQLAFNAFFSFFLNSQKFTPFIFNSLVLLTISATLLAVNADSENTSGVSKG  197 (248)
Q Consensus       118 lGvl~a~~n~lYa~gl~yLp~ST~sLi~sTqL~FTAiFs~li~~~kfT~~~insvvLlt~g~~Ll~l~~~s~~~~~~~~~  197 (248)
                      .-++|...||+|-.+++.+.+|..+-|.+-.-+|.-+++.++++.||.-+.+.|+++..-|.++.+--|..       .+
T Consensus        59 F~i~Wt~aNY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~~~~~kIlaailAI~GiVmiay~DN~-------~a  131 (290)
T KOG4314|consen   59 FSIFWTGANYLYLLALKKISASDASAIFACNAAFVFILAIIVLGDRFMGFKILAAILAIGGIVMIAYADNE-------HA  131 (290)
T ss_pred             eEEEEecCCcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHHhccchhhhhHHHHHHHhCcEEEEEeccch-------hh
Confidence            34788899999999999999999999999999999999999999999999999999999988887633322       34


Q ss_pred             ccchhHHHHHHHHHHHHHHHHHHHHHHHHhhcccc
Q 043307          198 NYVIGFLCTLGASATYSLYLSLLQLSFEKVIKKET  232 (248)
Q Consensus       198 ~y~lGf~~tL~Asalygl~l~L~ql~f~Kv~k~~t  232 (248)
                      ..++|..|+++.+...++|=    +.|+.++...+
T Consensus       132 ~e~iGi~~AV~SA~~aAlYK----V~FK~~iGnAn  162 (290)
T KOG4314|consen  132 DEIIGIACAVGSAFMAALYK----VLFKMFIGNAN  162 (290)
T ss_pred             hhhhhHHHHHHHHHHHHHHH----HHHHHHhccCc
Confidence            46999999999999988854    45588776654

>PRK15430 putative chloramphenical resistance permease RarD; Provisional

Probab=97.32  E-value=0.006  Score=55.47  Aligned_cols=71  Identities=13%  Similarity=0.142  Sum_probs=62.6

Q ss_pred             HHHHHHHHHHHHhHHHHHhhhcccchhhHHHHHhhhhHHHHHHHHHHhccccchHHHHHHHHHHHHHHHHh
Q 043307          113 CLYVAFGLLLTGDNMMYSYGLLYLPLSTYSLLCATQLAFNAFFSFFLNSQKFTPFIFNSLVLLTISATLLA  183 (248)
Q Consensus       113 ~~~~~lGvl~a~~n~lYa~gl~yLp~ST~sLi~sTqL~FTAiFs~li~~~kfT~~~insvvLlt~g~~Ll~  183 (248)
                      ...+..|+..+.-.++|.++++++|+++.+++...+++++.++++++.+|++|+.++.+.++..++..+..
T Consensus       214 ~~~~~~g~~t~i~~~~~~~a~~~~~a~~~s~~~~l~Pv~a~~~g~l~l~E~~~~~~~~G~~lI~~~~~v~~  284 (296)
T PRK15430        214 LLLIAAGIVTTVPLLCFTAAATRLRLSTLGFFQYIGPTLMFLLAVTFYGEKPGADKMVTFAFIWVALAIFV  284 (296)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHH
Confidence            34444566677888999999999999999999999999999999999999999999999999988877654

>COG2962 RarD Predicted permeases [General function prediction only]

Probab=97.31  E-value=0.0027  Score=59.25  Aligned_cols=115  Identities=11%  Similarity=0.099  Sum_probs=90.7

Q ss_pred             hHHHHHHHHHHHHHHHHhHHHHHhhhcccchhhHHHHHhhhhHHHHHHHHHHhccccchHHHHHHHHHHHHHHHHhccCC
Q 043307          108 ISTLVCLYVAFGLLLTGDNMMYSYGLLYLPLSTYSLLCATQLAFNAFFSFFLNSQKFTPFIFNSLVLLTISATLLAVNAD  187 (248)
Q Consensus       108 ~~~l~~~~~~lGvl~a~~n~lYa~gl~yLp~ST~sLi~sTqL~FTAiFs~li~~~kfT~~~insvvLlt~g~~Ll~l~~~  187 (248)
                      .||.+...+.-+++++.|=.+|-++..+=-+--.|+=+.-...++.+.+.+..|||+++.|+.||++.++|+.....+.+
T Consensus        68 ~p~~~~~~~l~a~li~~nW~lfiWAvn~g~~leaSLGY~InPL~~VllG~lflkErls~~Q~iAV~lA~~GV~~~~~~~g  147 (293)
T COG2962          68 QPKTLLMLALTALLIGLNWWLFIWAVNNGHVLEASLGYFINPLVNVLLGRLFLKERLSRLQWIAVGLAAAGVLIQTWLLG  147 (293)
T ss_pred             CcHHHHHHHHHHHHHHHHHHHhheecCCCchhHHHhHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHcC
Confidence            35888888999999999999999999986666668888999999999999999999999999999999999998777655


Q ss_pred             CCCCCCCCCcccchhHHHHHHHHHHHHHHHHHHHHHHHHhhccc-ceeeehhhh
Q 043307          188 SENTSGVSKGNYVIGFLCTLGASATYSLYLSLLQLSFEKVIKKE-TFSVVMDMQ  240 (248)
Q Consensus       188 s~~~~~~~~~~y~lGf~~tL~Asalygl~l~L~ql~f~Kv~k~~-t~~~vlemQ  240 (248)
                      +=         .    +.+++=|+.||+|..+     ||.+|-+ -..+.+|+-
T Consensus       148 ~l---------p----wval~la~sf~~Ygl~-----RK~~~v~a~~g~~lE~l  183 (293)
T COG2962         148 SL---------P----WVALALALSFGLYGLL-----RKKLKVDALTGLTLETL  183 (293)
T ss_pred             CC---------c----HHHHHHHHHHHHHHHH-----HHhcCCchHHhHHHHHH
Confidence            41         2    3445556667776544     6666533 445566643

>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein

Probab=97.28  E-value=0.00074  Score=60.74  Aligned_cols=70  Identities=14%  Similarity=0.263  Sum_probs=61.6

Q ss_pred             HHHHHHHHHHHHhHHHHHhhhcccchhhHHHHHhhhhHHHHHHHHHHhccccchHHHHHHHHHHHHHHHH
Q 043307          113 CLYVAFGLLLTGDNMMYSYGLLYLPLSTYSLLCATQLAFNAFFSFFLNSQKFTPFIFNSLVLLTISATLL  182 (248)
Q Consensus       113 ~~~~~lGvl~a~~n~lYa~gl~yLp~ST~sLi~sTqL~FTAiFs~li~~~kfT~~~insvvLlt~g~~Ll  182 (248)
                      ..-...++..+....+|.++++++|+++.+...+.+++++.++++++.+|+.|+.++.+.++..+|..++
T Consensus       212 ~~~~~~~~~s~l~~~l~~~al~~~~a~~~~~~~~l~pv~a~l~g~~~lgE~~~~~~~iG~~lil~Gv~l~  281 (281)
T TIGR03340       212 PSATLGGLMIGGAYALVLWAMTRLPVATVVALRNTSIVFAVVLGIWFLNERWYLTRLMGVCIIVAGLVVL  281 (281)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhhCCceEEEeecccHHHHHHHHHHHHhCCCccHHHHHHHHHHHHhHHhC
Confidence            3334445667778889999999999999999999999999999999999999999999999999998763

This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.

>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long

Probab=97.27  E-value=0.0028  Score=58.63  Aligned_cols=113  Identities=19%  Similarity=0.158  Sum_probs=90.8

Q ss_pred             HHHHHHHHHHHHHHHHhHHHHHhhhcccchhhHH-HHHhhhhHHHHHHHHHHhccccchHH----HHHHHHHHHHHHHHh
Q 043307          109 STLVCLYVAFGLLLTGDNMMYSYGLLYLPLSTYS-LLCATQLAFNAFFSFFLNSQKFTPFI----FNSLVLLTISATLLA  183 (248)
Q Consensus       109 ~~l~~~~~~lGvl~a~~n~lYa~gl~yLp~ST~s-Li~sTqL~FTAiFs~li~~~kfT~~~----insvvLlt~g~~Ll~  183 (248)
                      ++.+..++.-|+.|+..+.....+.+++-+|..- +-...||+.|+++++++.+|--+...    +.|++++.+|+++.+
T Consensus        42 ~~~~~~~~lsG~~W~iGq~~qf~s~~~~GVS~tmPiStg~QLvg~sl~gv~~fgEW~~~~~~~~G~~Al~liiiGv~lts  121 (269)
T PF06800_consen   42 GTSFIVAFLSGAFWAIGQIGQFKSFKKIGVSKTMPISTGLQLVGTSLIGVLFFGEWTTTTQKIIGFLALVLIIIGVILTS  121 (269)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhcceeeeccchhHHHHHHHHHHHhhcCCCCCcchHHHHHHHHHHHHHHHHHhc
Confidence            4888999999999999999999999988776433 33489999999999999999777554    459999999999977


Q ss_pred             ccCCCCCCCCCCCcccchhHHHHHHHHHHHHHHHHHHHH
Q 043307          184 VNADSENTSGVSKGNYVIGFLCTLGASATYSLYLSLLQL  222 (248)
Q Consensus       184 l~~~s~~~~~~~~~~y~lGf~~tL~Asalygl~l~L~ql  222 (248)
                      .++++++.+ +++++..-|....+.+++.|.+|....+.
T Consensus       122 ~~~~~~~~~-~~~~~~~kgi~~Ll~stigy~~Y~~~~~~  159 (269)
T PF06800_consen  122 YQDKKSDKS-SSKSNMKKGILALLISTIGYWIYSVIPKA  159 (269)
T ss_pred             ccccccccc-ccccchhhHHHHHHHHHHHHHHHHHHHHh
Confidence            766554422 23455667899999999999999888754

Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane

>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator

Probab=97.14  E-value=0.0051  Score=55.66  Aligned_cols=64  Identities=11%  Similarity=-0.073  Sum_probs=57.9

Q ss_pred             HHHHhHHHHHhhhcccchhhHHHHHhhhhHHHHHHHHHHhccccchHHHHHHHHHHHHHHHHhc
Q 043307          121 LLTGDNMMYSYGLLYLPLSTYSLLCATQLAFNAFFSFFLNSQKFTPFIFNSLVLLTISATLLAV  184 (248)
Q Consensus       121 l~a~~n~lYa~gl~yLp~ST~sLi~sTqL~FTAiFs~li~~~kfT~~~insvvLlt~g~~Ll~l  184 (248)
                      .+..-|.++.+++++++++|.+++...+.++++++++++.+|++|..++.+.++..+|..+...
T Consensus       230 ~~~~~~~~~~~~l~~~sa~t~sv~~~l~pv~~~~~~~~~lge~lt~~~~~G~~lil~Gv~l~~~  293 (302)
T TIGR00817       230 FFHFYQQVAFMLLGRVSPLTHSVGNCMKRVVVIVVSILFFGTKISPQQVFGTGIAIAGVFLYSR  293 (302)
T ss_pred             HHHHHHHHHHHHHccCCchHHHHHhhhhhhheeeeehhhcCCCCchhHHHHHHHHHHHHHHHHH
Confidence            3445567888899999999999999999999999999999999999999999999999988654

specificities overlap.

>PRK10452 multidrug efflux system protein MdtJ; Provisional

Probab=97.02  E-value=0.0079  Score=49.33  Aligned_cols=69  Identities=16%  Similarity=0.294  Sum_probs=59.8

Q ss_pred             HHHHHHhHHHHHhhhcccchhh-HHHHHhhhhHHHHHHHHHHhccccchHHHHHHHHHHHHHHHHhccCC
Q 043307          119 GLLLTGDNMMYSYGLLYLPLST-YSLLCATQLAFNAFFSFFLNSQKFTPFIFNSLVLLTISATLLAVNAD  187 (248)
Q Consensus       119 Gvl~a~~n~lYa~gl~yLp~ST-~sLi~sTqL~FTAiFs~li~~~kfT~~~insvvLlt~g~~Ll~l~~~  187 (248)
                      -+.++..=++.+.+++++|.|+ |++....-.+.+++.+.++.+|++|..++..+++..+|.+++-+.+.
T Consensus        37 i~~~~~sf~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~~~~~gi~lIi~GVi~l~l~~~  106 (120)
T PRK10452         37 LVMISLSYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLMKIAGLTTLVAGIVLIKSGTR  106 (120)
T ss_pred             HHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhcCCC
Confidence            3556666688899999999997 56667889999999999999999999999999999999998876553

>PRK13499 rhamnose-proton symporter; Provisional

Probab=97.00  E-value=0.0099  Score=56.72  Aligned_cols=109  Identities=11%  Similarity=0.157  Sum_probs=87.4

Q ss_pred             HHHHHHHHHHHHHHHHhHHHHHhhhcccchhh-HHHHHhhhhHHHHHHHHHHhcc-------ccchHHHHHHHHHHHHHH
Q 043307          109 STLVCLYVAFGLLLTGDNMMYSYGLLYLPLST-YSLLCATQLAFNAFFSFFLNSQ-------KFTPFIFNSLVLLTISAT  180 (248)
Q Consensus       109 ~~l~~~~~~lGvl~a~~n~lYa~gl~yLp~ST-~sLi~sTqL~FTAiFs~li~~~-------kfT~~~insvvLlt~g~~  180 (248)
                      ++.+...+..|++++..|..+..+.+|+-+|. ..+-..+|++++.++..++..+       +-....+.+++++++|.+
T Consensus        70 ~~~~~~~~l~G~~W~iG~i~~~~s~~~iGvS~~~pIs~Gl~lv~gtL~~~i~~gew~~~~~t~~g~~~~~gv~liliGi~  149 (345)
T PRK13499         70 GSTLLPVFLFGALWGIGGITYGLTMRYLGMSLGIGIAIGITLIVGTLMPPIINGNFDVLLATNGGRMTLLGVLVALIGVA  149 (345)
T ss_pred             HHHHHHHHHHHHHHHhhhhhHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHccccccccccchHHHHHHHHHHHHHHHH
Confidence            47778889999999999999999999999985 4566789999999999888542       222457889999999999


Q ss_pred             HHhc----cCCCCCCCCCCCcccchhHHHHHHHHHHHHHHH
Q 043307          181 LLAV----NADSENTSGVSKGNYVIGFLCTLGASATYSLYL  217 (248)
Q Consensus       181 Ll~l----~~~s~~~~~~~~~~y~lGf~~tL~Asalygl~l  217 (248)
                      +.+.    .+..++.+++++++..-|.+.++.+.+.|+.+.
T Consensus       150 l~s~Ag~~k~~~~~~~~~~~~~~~KGi~ialisgi~~~~f~  190 (345)
T PRK13499        150 IVGRAGQLKERKMGIKKAEEFNLKKGLILAVMSGIFSACFS  190 (345)
T ss_pred             HHHHhhhhcccccccccccccchHhHHHHHHHHHHHHHHHH
Confidence            9887    544332221345677889999999999999988

>PRK11453 O-acetylserine/cysteine export protein; Provisional

Probab=96.88  E-value=0.044  Score=49.80  Aligned_cols=65  Identities=11%  Similarity=-0.043  Sum_probs=58.4

Q ss_pred             HHHhHHHHHhhhcccchhhHHHHHhhhhHHHHHHHHHHhccccchHHHHHHHHHHHHHHHHhccC
Q 043307          122 LTGDNMMYSYGLLYLPLSTYSLLCATQLAFNAFFSFFLNSQKFTPFIFNSLVLLTISATLLAVNA  186 (248)
Q Consensus       122 ~a~~n~lYa~gl~yLp~ST~sLi~sTqL~FTAiFs~li~~~kfT~~~insvvLlt~g~~Ll~l~~  186 (248)
                      .+..-++|..+++++++++.+.+...++++++++++++.+|++|..++.+.++..+|+.+...+.
T Consensus       225 t~~~~~l~~~~l~~~~a~~~s~~~~l~Pv~a~~~~~l~lgE~~~~~~~iG~~lI~~gv~l~~~~~  289 (299)
T PRK11453        225 TIVGYGIWGTLLGRYETWRVAPLSLLVPVVGLASAALLLDERLTGLQFLGAVLIMAGLYINVFGL  289 (299)
T ss_pred             HHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHHhcch
Confidence            44566788899999999999999999999999999999999999999999999999988755544

>COG2510 Predicted membrane protein [Function unknown]

Probab=96.83  E-value=0.0026  Score=53.44  Aligned_cols=111  Identities=15%  Similarity=0.143  Sum_probs=79.5

Q ss_pred             CchhHHHHHhhhCchhhhhhhhhcccCCCCCCCCCCchHHHHHHHHHHHHHHHHhHHHHHhhhcccchhhHHHHHhhhhH
Q 043307           71 NSKWMATFVQSAGFPILLPVLCCFSNGSRSTNKTDPKISTLVCLYVAFGLLLTGDNMMYSYGLLYLPLSTYSLLCATQLA  150 (248)
Q Consensus        71 ~s~W~~t~vqtagfPlll~~~~~~~~~~~~~~~~~p~~~~l~~~~~~lGvl~a~~n~lYa~gl~yLp~ST~sLi~sTqL~  150 (248)
                      -.+=++|.+.+----+.+..+++...+.....+..   +|-..--+.-|+..++.-++|..+++.=++|--.=+-.+..+
T Consensus        29 vdp~~At~IRtiVi~~~l~~v~~~~g~~~~~~~~~---~k~~lflilSGla~glswl~Yf~ALk~G~as~VvPldk~svv  105 (140)
T COG2510          29 VDPDFATTIRTIVILIFLLIVLLVTGNWQAGGEIG---PKSWLFLILSGLAGGLSWLLYFRALKKGKASRVVPLDKTSVV  105 (140)
T ss_pred             cCccHHHHHHHHHHHHHHHHHHHhcCceecccccC---cceehhhhHHHHHHHHHHHHHHHHHhcCCcceEEEcccccHH
Confidence            34556666666433333333333322222111112   233333445578888899999999999999988889999999


Q ss_pred             HHHHHHHHHhccccchHHHHHHHHHHHHHHHHhc
Q 043307          151 FNAFFSFFLNSQKFTPFIFNSLVLLTISATLLAV  184 (248)
Q Consensus       151 FTAiFs~li~~~kfT~~~insvvLlt~g~~Ll~l  184 (248)
                      |+++|+.+..+||.|..+|..++|.++|++++++
T Consensus       106 l~~lls~lfL~E~ls~~~~iG~~LI~~Gailvs~  139 (140)
T COG2510         106 LAVLLSILFLGERLSLPTWIGIVLIVIGAILVSL  139 (140)
T ss_pred             HHHHHHHHHhcCCCCHHHHHHHHHHHhCeeeEec
Confidence            9999999999999999999999999999998754

>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function

Probab=96.72  E-value=0.004  Score=57.92  Aligned_cols=71  Identities=25%  Similarity=0.313  Sum_probs=63.5

Q ss_pred             HHHHHhHHHHHhhhcccchhhHHHHHhhhhHHHHHHHHHHhccccchHHHHHHHHHHHHHHHHhccCCCCC
Q 043307          120 LLLTGDNMMYSYGLLYLPLSTYSLLCATQLAFNAFFSFFLNSQKFTPFIFNSLVLLTISATLLAVNADSEN  190 (248)
Q Consensus       120 vl~a~~n~lYa~gl~yLp~ST~sLi~sTqL~FTAiFs~li~~~kfT~~~insvvLlt~g~~Ll~l~~~s~~  190 (248)
                      ++++.++.+-..++.+.|++.-+=+.+.++++|++++.++++||+++.-+.++++..+|.+++......++
T Consensus        58 ~~~~~g~~~~~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~~~~~~~G~~l~i~G~~liv~~~~~~~  128 (300)
T PF05653_consen   58 LLMVLGEILNFVALGFAPASLVAPLGALSLVFNAVLARFFLGEKLTRRDIVGCALIILGSVLIVIFAPKEE  128 (300)
T ss_pred             HHHhcchHHHHHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcccchHhHHhhHHHHHhhheeeEEeCCCCC
Confidence            45677778888999999999999999999999999999999999999999999999999998877654443

>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional

Probab=96.23  E-value=0.059  Score=44.42  Aligned_cols=67  Identities=15%  Similarity=0.122  Sum_probs=55.6

Q ss_pred             HHHHHhHHHHHhhhcccchhhHHHHHhhhhHHHHHHHHH--HhccccchHHHHHHHHHHHHHHHHhccC
Q 043307          120 LLLTGDNMMYSYGLLYLPLSTYSLLCATQLAFNAFFSFF--LNSQKFTPFIFNSLVLLTISATLLAVNA  186 (248)
Q Consensus       120 vl~a~~n~lYa~gl~yLp~ST~sLi~sTqL~FTAiFs~l--i~~~kfT~~~insvvLlt~g~~Ll~l~~  186 (248)
                      +.++..-+++.++++.+|+|...=+.+.-.+++++.++.  +.+|++|+.++.++++..+|..+++.++
T Consensus        56 ~~~~la~~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls~~~~iGi~lIi~GV~lv~~~~  124 (129)
T PRK02971         56 AGYALSMLCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFSLKKTLGVACIMLGVWLINLPT  124 (129)
T ss_pred             HHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhccCC
Confidence            445666678888999999999887766666778888885  7999999999999999999999976543

>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]

Probab=96.18  E-value=0.23  Score=43.00  Aligned_cols=75  Identities=20%  Similarity=0.300  Sum_probs=62.5

Q ss_pred             HHHHHHHHHHHHH-HhHHHHHhhhcccchhhHHHHHhhhhHHHHHHHHHHhccccchHHHHHHHHHHHHHHHHhcc
Q 043307          111 LVCLYVAFGLLLT-GDNMMYSYGLLYLPLSTYSLLCATQLAFNAFFSFFLNSQKFTPFIFNSLVLLTISATLLAVN  185 (248)
Q Consensus       111 l~~~~~~lGvl~a-~~n~lYa~gl~yLp~ST~sLi~sTqL~FTAiFs~li~~~kfT~~~insvvLlt~g~~Ll~l~  185 (248)
                      -......+|++.. ....++.+++...|++..+.+..++.+++.++++++.+|++++.++.+.++...|..+...+
T Consensus       213 ~~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~l~~~e~~~~~~~~G~~li~~g~~l~~~~  288 (292)
T COG0697         213 AWLLLLYLGVFSTGLAYLLWYYALRLLGASLVALLSLLEPVFAALLGVLLLGEPLSPAQLLGAALVVLGVLLASLR  288 (292)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHhcc
Confidence            3334444455544 47778889999999999999999999999999999999999999999998888888886544

>PRK10650 multidrug efflux system protein MdtI; Provisional

Probab=96.07  E-value=0.055  Score=43.70  Aligned_cols=63  Identities=19%  Similarity=0.153  Sum_probs=56.2

Q ss_pred             HHHHHhHHHHHhhhcccchhh-HHHHHhhhhHHHHHHHHHHhccccchHHHHHHHHHHHHHHHH
Q 043307          120 LLLTGDNMMYSYGLLYLPLST-YSLLCATQLAFNAFFSFFLNSQKFTPFIFNSLVLLTISATLL  182 (248)
Q Consensus       120 vl~a~~n~lYa~gl~yLp~ST-~sLi~sTqL~FTAiFs~li~~~kfT~~~insvvLlt~g~~Ll  182 (248)
                      +.++..-++.+.+++++|+++ |++-...-.+.+++.+.++.+|++|+.++.++.+..+|.+++
T Consensus        43 ~~~~~sf~~Ls~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~~~~~~gi~lIi~GVi~l  106 (109)
T PRK10650         43 AAVLAAFSALSQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNRKGWIGLVLLLAGMVMI  106 (109)
T ss_pred             HHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHh
Confidence            455566688889999999986 788888999999999999999999999999999999999886

>PRK11431 multidrug efflux system protein; Provisional

Probab=95.98  E-value=0.071  Score=42.70  Aligned_cols=65  Identities=17%  Similarity=0.200  Sum_probs=56.3

Q ss_pred             HHHHHhHHHHHhhhcccchhh-HHHHHhhhhHHHHHHHHHHhccccchHHHHHHHHHHHHHHHHhc
Q 043307          120 LLLTGDNMMYSYGLLYLPLST-YSLLCATQLAFNAFFSFFLNSQKFTPFIFNSLVLLTISATLLAV  184 (248)
Q Consensus       120 vl~a~~n~lYa~gl~yLp~ST-~sLi~sTqL~FTAiFs~li~~~kfT~~~insvvLlt~g~~Ll~l  184 (248)
                      +.++..=++.+.+++++|.++ |++-...-.+.+++.++++.+||+|+.++.++.+..+|.+.+-+
T Consensus        37 ~~~~~sf~~Ls~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~~~~~~gi~lIi~GVv~l~l  102 (105)
T PRK11431         37 TAMIVSMALLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESASPARLLSLALIVAGIIGLKL  102 (105)
T ss_pred             HHHHHHHHHHHHHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhhhc
Confidence            344555577889999999986 77888899999999999999999999999999999999988744

>PRK09541 emrE multidrug efflux protein; Reviewed

Probab=95.96  E-value=0.089  Score=42.39  Aligned_cols=65  Identities=11%  Similarity=0.243  Sum_probs=54.9

Q ss_pred             HHHhHHHHHhhhcccchhh-HHHHHhhhhHHHHHHHHHHhccccchHHHHHHHHHHHHHHHHhccC
Q 043307          122 LTGDNMMYSYGLLYLPLST-YSLLCATQLAFNAFFSFFLNSQKFTPFIFNSLVLLTISATLLAVNA  186 (248)
Q Consensus       122 ~a~~n~lYa~gl~yLp~ST-~sLi~sTqL~FTAiFs~li~~~kfT~~~insvvLlt~g~~Ll~l~~  186 (248)
                      ++..=++.+.+++++|.|+ |++-...-.+.+++.+.++.+|++|..++.++++..+|.+++.+.+
T Consensus        40 ~~~sf~~l~~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~~~~~~~gi~lIi~GVi~l~l~~  105 (110)
T PRK09541         40 YCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLVINLLS  105 (110)
T ss_pred             HHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcCC
Confidence            3344466788999999987 5666778899999999999999999999999999999999986543

>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]

Probab=95.88  E-value=0.084  Score=42.69  Aligned_cols=61  Identities=16%  Similarity=0.246  Sum_probs=54.8

Q ss_pred             hHHHHHhhhcccchhh-HHHHHhhhhHHHHHHHHHHhccccchHHHHHHHHHHHHHHHHhcc
Q 043307          125 DNMMYSYGLLYLPLST-YSLLCATQLAFNAFFSFFLNSQKFTPFIFNSLVLLTISATLLAVN  185 (248)
Q Consensus       125 ~n~lYa~gl~yLp~ST-~sLi~sTqL~FTAiFs~li~~~kfT~~~insvvLlt~g~~Ll~l~  185 (248)
                      .=.+.+.+++++|+++ |++-...-.+-|++.++++.+|++++.++.++.|+.+|.+.+-+.
T Consensus        43 sf~~Ls~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~~~~~~gl~LiiaGvi~Lk~~  104 (106)
T COG2076          43 SFYLLSLALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLSLIKLLGLALILAGVIGLKLG  104 (106)
T ss_pred             HHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHHHHHhhhc
Confidence            3377889999999997 788889999999999999999999999999999999999887544

>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional

Probab=95.45  E-value=0.099  Score=49.14  Aligned_cols=66  Identities=14%  Similarity=0.036  Sum_probs=57.2

Q ss_pred             HHHHHHHhHHHHHhhhcccchhhHHHHHhhhhHHHHHHHHHHhccccchHHHHHHHHHHHHHHHHh
Q 043307          118 FGLLLTGDNMMYSYGLLYLPLSTYSLLCATQLAFNAFFSFFLNSQKFTPFIFNSLVLLTISATLLA  183 (248)
Q Consensus       118 lGvl~a~~n~lYa~gl~yLp~ST~sLi~sTqL~FTAiFs~li~~~kfT~~~insvvLlt~g~~Ll~  183 (248)
                      -|+.+...|..-.+++.++++.|+++.+..|.+++.++++++.++++|+.++.+.++..+|..+..
T Consensus       282 s~l~~~l~n~~~f~~l~~~s~~t~sv~~~lk~V~~iv~s~l~~ge~lt~~~~iG~~lii~Gv~lYs  347 (350)
T PTZ00343        282 SGVWYYLYNEVAFYCLGKVNQVTHAVANTLKRVVIIVSSIIIFQTQVTLLGYLGMAVAILGALLYS  347 (350)
T ss_pred             HHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHhhhhHHHhCCCCchHhHHHHHHHHHHHHHHh
Confidence            345555555554479999999999999999999999999999999999999999999999988754

>TIGR00803 nst UDP-galactose transporter

Probab=95.15  E-value=0.044  Score=47.61  Aligned_cols=125  Identities=13%  Similarity=0.097  Sum_probs=83.0

Q ss_pred             HhccchHHHHHHHHHhcCCCchhHHHHHhhhCchhhhhhhhhcc--cCCCCCCCCCCc---hHHHHHHHHHHHHHHHHhH
Q 043307           52 LVGQSAATLLGRLYYDKGGNSKWMATFVQSAGFPILLPVLCCFS--NGSRSTNKTDPK---ISTLVCLYVAFGLLLTGDN  126 (248)
Q Consensus        52 ~~G~~~~~LL~r~Yy~~gG~s~W~~t~vqtagfPlll~~~~~~~--~~~~~~~~~~p~---~~~l~~~~~~lGvl~a~~n  126 (248)
                      +.+.+...=+...|.+++-+++=..-|.|...-|+..++..+.-  ..........+.   ++..   ...+++..+.+.
T Consensus        90 ~l~a~~~~~~~~~y~e~~~k~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~a~~~  166 (222)
T TIGR00803        90 VLSALLSSGFAGVYFEKILKDGDTMFWSRNLQLPLFGLFSTFSVLLWSDGTLISNFGFFIGYPTA---VWIVGLLNVGGG  166 (222)
T ss_pred             HHHHHHHHhhhHHHHHHcccCCCCchHHHHHHHHHHHHHHHHHHHhhcccchhhccCcccCCchH---HHHHHHHHHhcC
Confidence            33344445567788888744432446667777777666642211  111110011111   1222   223345566777


Q ss_pred             HHHHhhhcccchhhHHHHHhhhhHHHHHHHHHHhccccchHHHHHHHHHHHHH
Q 043307          127 MMYSYGLLYLPLSTYSLLCATQLAFNAFFSFFLNSQKFTPFIFNSLVLLTISA  179 (248)
Q Consensus       127 ~lYa~gl~yLp~ST~sLi~sTqL~FTAiFs~li~~~kfT~~~insvvLlt~g~  179 (248)
                      .+.++-++|.+..+.+.+.++..+++++.++++.++++|+.++.++.+...|.
T Consensus       167 ~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~~~~~g~~lV~~~~  219 (222)
T TIGR00803       167 LCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISSTFYLGAILVFLAT  219 (222)
T ss_pred             ceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHeee
Confidence            78889999999999999999999999999999999999999999998877664

NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.

>PRK13499 rhamnose-proton symporter; Provisional

Probab=95.06  E-value=0.43  Score=45.69  Aligned_cols=117  Identities=13%  Similarity=0.098  Sum_probs=77.6

Q ss_pred             CCCchhHHHHHhhhCch----hhhhhhhhcccCC-CC-----CC-CCCCchHHHHHHHHHHHHHHHHhHHHHHhhhcccc
Q 043307           69 GGNSKWMATFVQSAGFP----ILLPVLCCFSNGS-RS-----TN-KTDPKISTLVCLYVAFGLLLTGDNMMYSYGLLYLP  137 (248)
Q Consensus        69 gG~s~W~~t~vqtagfP----lll~~~~~~~~~~-~~-----~~-~~~p~~~~l~~~~~~lGvl~a~~n~lYa~gl~yLp  137 (248)
                      .|.+.|-..+.|..|-=    +.-+.++....++ ++     +. .++|...|-.+.++.-|++++.+|+.|..|-..++
T Consensus       206 ~g~~~~~~~lp~~~~~~~G~~~~n~~~~~~~~~k~~~~~~~~~~~~~~~~~~~n~l~~~l~G~~W~~~~~~y~~~~~~~g  285 (345)
T PRK13499        206 LGVDPLYAALPSYVVIMGGGAITNLGFCFIRLAKNKDLSLKADFSLAKPLLITNVLLSALAGVMWYLQFFFYAMGHSKLG  285 (345)
T ss_pred             cCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCcccchhccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence            56777878888876322    2223333322111 11     11 12233456777889999999999999999999986


Q ss_pred             hhhHHH---HH-hhhhHHHHHHHHHHhccccc------hHHHHHHHHHHHHHHHHhccC
Q 043307          138 LSTYSL---LC-ATQLAFNAFFSFFLNSQKFT------PFIFNSLVLLTISATLLAVNA  186 (248)
Q Consensus       138 ~ST~sL---i~-sTqL~FTAiFs~li~~~kfT------~~~insvvLlt~g~~Ll~l~~  186 (248)
                      +++...   +. |+-.++..+=.. +.||+=+      +..+..++++.+|+++++++.
T Consensus       286 ~~~~~~sw~l~m~~~ViistlwGi-~lkE~K~a~~k~~~~l~~G~vliI~g~~lig~~~  343 (345)
T PRK13499        286 AQYDFVSWMLHMSFYVLCGNLWGL-VLKEWKGASRRPVRVLSLGCVVIILAANIVGLGN  343 (345)
T ss_pred             CccchHHHHHhccHHHHHHHHhhh-hhhhccCCCccchhHHHHHHHHHHHHHHHHhhcc
Confidence            664433   33 666666666666 4777666      788888899999998888764

>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]

Probab=95.01  E-value=0.18  Score=47.01  Aligned_cols=73  Identities=15%  Similarity=0.200  Sum_probs=64.3

Q ss_pred             hHHHHHHHHHHHHHHHHhHH-HHHhhhcccchhhHHHHHhhhhHHHHHHHHHHhccccchHHHHHHHHHHHHHH
Q 043307          108 ISTLVCLYVAFGLLLTGDNM-MYSYGLLYLPLSTYSLLCATQLAFNAFFSFFLNSQKFTPFIFNSLVLLTISAT  180 (248)
Q Consensus       108 ~~~l~~~~~~lGvl~a~~n~-lYa~gl~yLp~ST~sLi~sTqL~FTAiFs~li~~~kfT~~~insvvLlt~g~~  180 (248)
                      .|.++.+....|++..+--| +=..++..+|.++|+++.+.+.++.|+-..++..|.+|+.||.++++...+++
T Consensus       205 ~p~ll~laLgvavlSSalPYsLEmiAL~rlp~~~F~~LlSLePa~aAl~G~i~L~e~ls~~qwlaI~~ViaAsa  278 (292)
T COG5006         205 SPSLLPLALGVAVLSSALPYSLEMIALRRLPARTFGTLLSLEPALAALSGLIFLGETLTLIQWLAIAAVIAASA  278 (292)
T ss_pred             ChHHHHHHHHHHHHhcccchHHHHHHHhhCChhHHHHHHHhhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHh
Confidence            57888899999998776554 33468999999999999999999999999999999999999999998887766

>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]

Probab=94.98  E-value=0.32  Score=46.09  Aligned_cols=100  Identities=17%  Similarity=0.246  Sum_probs=78.6

Q ss_pred             HHHHHHhHHHHHhhhcccchhhHHHHHhhhhHHHHHHHHHHhccccchHHHHHHHHHHHHHHHHhccCCCCCCCCCCCcc
Q 043307          119 GLLLTGDNMMYSYGLLYLPLSTYSLLCATQLAFNAFFSFFLNSQKFTPFIFNSLVLLTISATLLAVNADSENTSGVSKGN  198 (248)
Q Consensus       119 Gvl~a~~n~lYa~gl~yLp~ST~sLi~sTqL~FTAiFs~li~~~kfT~~~insvvLlt~g~~Ll~l~~~s~~~~~~~~~~  198 (248)
                      -+++.++=+-=..+++|+|+.+|.++=-.-.+++|+-=..+.+.|++...+.|+++..+|+...+..|.+.+        
T Consensus        84 ~~lf~~~i~t~~~slk~lnVpm~tv~kn~tii~~ai~E~lf~~~~~~~~v~~Sv~~m~~~s~~~~~~d~sf~--------  155 (314)
T KOG1444|consen   84 SLLFVGMLFTGSKSLKYLNVPMFTVFKNLTIILTAIGEVLFFGKRPSNKVWASVFAMIIGSVAAAFTDLSFN--------  155 (314)
T ss_pred             HHHHHHHHHHccccccccCchHHHHHhhchHHHHHHhHHhhcCcCchhhHHHHHHHHHHHHHhhccccceec--------
Confidence            344444444455789999999999999999999999999999999999999999999999988766665432        


Q ss_pred             cchhHHHHHHHHHHHHHHHHHHHHHHHHhhccc
Q 043307          199 YVIGFLCTLGASATYSLYLSLLQLSFEKVIKKE  231 (248)
Q Consensus       199 y~lGf~~tL~Asalygl~l~L~ql~f~Kv~k~~  231 (248)
                       ..|..+.+...+.-..+...+    ||.++..
T Consensus       156 -~~gY~w~~~n~~~~a~~~v~~----kk~vd~~  183 (314)
T KOG1444|consen  156 -LRGYSWALANCLTTAAFVVYV----KKSVDSA  183 (314)
T ss_pred             -chhHHHHHHHHHHHHHHHHHH----HHhhccc
Confidence             237888888877777655555    7766543

>KOG1582 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=94.84  E-value=0.4  Score=45.34  Aligned_cols=176  Identities=14%  Similarity=0.187  Sum_probs=126.0

Q ss_pred             ccchhHHHHHHHHHHHHhccchHHHHHHHHHhcCCCc--hhHHHHHhhhCchhhhhhh-hhcccCCCCCCCCCCchHHHH
Q 043307           36 KHYKWWLRVILYVVCLLVGQSAATLLGRLYYDKGGNS--KWMATFVQSAGFPILLPVL-CCFSNGSRSTNKTDPKISTLV  112 (248)
Q Consensus        36 ~~~~~w~lv~~~~~~l~~G~~~~~LL~r~Yy~~gG~s--~W~~t~vqtagfPlll~~~-~~~~~~~~~~~~~~p~~~~l~  112 (248)
                      .+..+|.-..+|+.-++.+-..---+..+-|+.-|=|  -|.-|++|-.=....-... ..+..++|    --|+.    
T Consensus        36 s~kpkw~QFlic~~g~Ff~Yl~yGy~qElif~~~gfkp~GWylTlvQf~~Ysg~glie~~~~~~k~r----~iP~r----  107 (367)
T KOG1582|consen   36 SDKPKWTQFLICSAGVFFLYLVYGYLQELIFNVEGFKPFGWYLTLVQFLVYSGFGLIELQLIQTKRR----VIPWR----  107 (367)
T ss_pred             ccCchhhhHHHHHhHHHHHHHHHHHHHHHHhccccCcccchHHHHHHHHHHHhhhheEEEeecccce----ecchh----
Confidence            3455688888888877777777777777777776666  7999999953221111111 11111111    22332    


Q ss_pred             HHHHHHHHHHHHhHHHHHhhhcccchhhHHHHHhhhhHHHHHHHHHHhccccchHHHHHHHHHHHHHHHHhccCCCCCCC
Q 043307          113 CLYVAFGLLLTGDNMMYSYGLLYLPLSTYSLLCATQLAFNAFFSFFLNSQKFTPFIFNSLVLLTISATLLAVNADSENTS  192 (248)
Q Consensus       113 ~~~~~lGvl~a~~n~lYa~gl~yLp~ST~sLi~sTqL~FTAiFs~li~~~kfT~~~insvvLlt~g~~Ll~l~~~s~~~~  192 (248)
                       .|..+..+....--|-.-++.||..-|--+.-.++++=..+-+.||-++|-...-..|-.++.+|.++..+-|+...| 
T Consensus       108 -tY~~la~~t~gtmGLsn~SlgYLNYPtQviFKccKliPVmiggifIqGkRY~v~d~~aA~lm~lGli~FTLADs~~sP-  185 (367)
T KOG1582|consen  108 -TYVILAFLTVGTMGLSNGSLGYLNYPTQVIFKCCKLIPVMIGGIFIQGKRYGVHDYIAAMLMSLGLIWFTLADSQTSP-  185 (367)
T ss_pred             -HhhhhHhhhhhccccCcCccccccCcHHHHHHhhhhhhhhheeeeeccccccHHHHHHHHHHHHHHHhhhhcccccCC-
Confidence             466666665555566667888888888888889999999999999999999999999999999999998887765443 


Q ss_pred             CCCCcccchhHHHHHHHHHHHHHHHHHHHHHHH
Q 043307          193 GVSKGNYVIGFLCTLGASATYSLYLSLLQLSFE  225 (248)
Q Consensus       193 ~~~~~~y~lGf~~tL~Asalygl~l~L~ql~f~  225 (248)
                          +-..+|..+.-+|=..=+++.-+-|-.|+
T Consensus       186 ----NF~~~Gv~mIsgALl~DA~iGNvQEk~m~  214 (367)
T KOG1582|consen  186 ----NFNLIGVMMISGALLADAVIGNVQEKAMK  214 (367)
T ss_pred             ----CcceeeHHHHHHHHHHHHHhhHHHHHHHh
Confidence                34678999998888888887777755554

>KOG1583 consensus UDP-N-acetylglucosamine transporter [Carbohydrate transport and metabolism]

Probab=94.81  E-value=0.09  Score=49.47  Aligned_cols=118  Identities=15%  Similarity=0.175  Sum_probs=85.6

Q ss_pred             HHHHHHHHHHHhHHHHHhhhc-ccchhhHHHHHhhhhHHHHHHHHHHhccccchHHHHHHHHHHHHHHHHhccCCCCCCC
Q 043307          114 LYVAFGLLLTGDNMMYSYGLL-YLPLSTYSLLCATQLAFNAFFSFFLNSQKFTPFIFNSLVLLTISATLLAVNADSENTS  192 (248)
Q Consensus       114 ~~~~lGvl~a~~n~lYa~gl~-yLp~ST~sLi~sTqL~FTAiFs~li~~~kfT~~~insvvLlt~g~~Ll~l~~~s~~~~  192 (248)
                      -|+..=++...-|..=++++. +.|.-..-+.=+..+.-|.+.+.+++++|-+..|+.||+++|+|.++-.+.++.|-.+
T Consensus        66 ~Y~i~V~mFF~vnv~NN~al~f~I~~PlHiIfRsgsll~nM~~g~il~~k~Ys~~Qy~Sv~~iTiGiiIcTl~s~~d~~~  145 (330)
T KOG1583|consen   66 DYAITVAMFFIVNVTNNYALKFNIPMPLHIIFRSGSLLANMILGWILLGKRYSLRQYSSVLMITIGIIICTLFSSKDGRS  145 (330)
T ss_pred             hhheehheeeeeeeeccceeeecccceEEEEEecCcHHHHHHHHHHhccceeehhhhhhHHhhhhhheeEEeecCcchhh
Confidence            344444555566666666665 4555555566677788899999999999999999999999999999987766554321


Q ss_pred             -------C---CCCcccchhHHHHHHHHHHHHHHHHHHHHHHHHhhccc
Q 043307          193 -------G---VSKGNYVIGFLCTLGASATYSLYLSLLQLSFEKVIKKE  231 (248)
Q Consensus       193 -------~---~~~~~y~lGf~~tL~Asalygl~l~L~ql~f~Kv~k~~  231 (248)
                             +   .+-....+|+.+-..|..+.+....--|..|||.-|..
T Consensus       146 ~~~~l~~~~~~~~~~~w~iGi~lL~~al~~sa~mgiyqE~~Y~kyGKh~  194 (330)
T KOG1583|consen  146 KLSGLDSGSAQSDFFWWLIGIALLVFALLLSAYMGIYQETTYQKYGKHW  194 (330)
T ss_pred             hhcccccCcccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCh
Confidence                   1   11223456887777788888877777888999988754

>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins

Probab=93.85  E-value=0.26  Score=38.05  Aligned_cols=55  Identities=15%  Similarity=0.107  Sum_probs=33.5

Q ss_pred             HHHHhHHHHHhhhcccchhhH-HHHHhhhhHHHHHHHHHHhccccchHHHHHHHHH
Q 043307          121 LLTGDNMMYSYGLLYLPLSTY-SLLCATQLAFNAFFSFFLNSQKFTPFIFNSLVLL  175 (248)
Q Consensus       121 l~a~~n~lYa~gl~yLp~ST~-sLi~sTqL~FTAiFs~li~~~kfT~~~insvvLl  175 (248)
                      .++..-++++.+++++|.|+. .+....-.+.+++.+.++.+|++|+.++.++.+.
T Consensus        38 ~~~~s~~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s~~~~~gi~lI   93 (93)
T PF00893_consen   38 GYGLSFYFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLSLSKWLGIGLI   93 (93)
T ss_dssp             HHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH--------HHHHHHH
T ss_pred             HHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHhheeeC
Confidence            566666899999999999985 6667788999999999999999999999998763

They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.

>PF06379 RhaT: L-rhamnose-proton symport protein (RhaT); InterPro: IPR004673 These proteins are members of the L-Rhamnose Symporter (RhaT) family

Probab=93.73  E-value=1.1  Score=43.12  Aligned_cols=164  Identities=15%  Similarity=0.217  Sum_probs=102.8

Q ss_pred             HHHHHHHHHhccchHHHHHHHH--HhcCCCchhHHHHHhhhCchhhhhhhhhcccCCCC--C-CCCCCchHHHHHHHHHH
Q 043307           44 VILYVVCLLVGQSAATLLGRLY--YDKGGNSKWMATFVQSAGFPILLPVLCCFSNGSRS--T-NKTDPKISTLVCLYVAF  118 (248)
Q Consensus        44 v~~~~~~l~~G~~~~~LL~r~Y--y~~gG~s~W~~t~vqtagfPlll~~~~~~~~~~~~--~-~~~~p~~~~l~~~~~~l  118 (248)
                      +++-+++-.+|..++   +-+|  |+|=-+=+|=+.|+--+=|.-++.|+......-+.  + -...|  ...+...+..
T Consensus         5 ii~Gii~h~iGg~~~---~sfy~P~kkvk~WsWEs~Wlv~gi~swli~P~~~a~l~ip~~~~i~~~~~--~~~l~~~~l~   79 (344)
T PF06379_consen    5 IILGIIFHAIGGFAS---GSFYVPFKKVKGWSWESYWLVQGIFSWLIVPWLWALLAIPDFFSIYSATP--ASTLFWTFLF   79 (344)
T ss_pred             HHHHHHHHHHHHHHh---hhhccchhhcCCccHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHhCC--hhHHHHHHHH
Confidence            344455555553322   2233  33433447888888777788888887665432222  0 01112  1345556778


Q ss_pred             HHHHHHhHHHHHhhhcccchhhHHHHHhhhhHHHHHHHHHH---hc--------cccchHHHHHHHHHHHHHHHHhc---
Q 043307          119 GLLLTGDNMMYSYGLLYLPLSTYSLLCATQLAFNAFFSFFL---NS--------QKFTPFIFNSLVLLTISATLLAV---  184 (248)
Q Consensus       119 Gvl~a~~n~lYa~gl~yLp~ST~sLi~sTqL~FTAiFs~li---~~--------~kfT~~~insvvLlt~g~~Ll~l---  184 (248)
                      |++++..++.|..+..||-+|.   -.+--+..+++|.-++   ..        ++-...++..+++..+|.++.+.   
T Consensus        80 G~lWGIGgltfGl~mryLGvSL---G~sI~lGl~~~~GTlippi~~g~~~~l~~~~~g~~vL~Gv~v~LiGIai~g~AG~  156 (344)
T PF06379_consen   80 GVLWGIGGLTFGLAMRYLGVSL---GQSIALGLCAVFGTLIPPIFQGTFDELLATPSGQIVLLGVAVCLIGIAICGKAGS  156 (344)
T ss_pred             HHHHhcchhhHhHHHHHHhHHH---HHHHHHHHHHHHhhchHHHHcCcccccccCCCchhhhhHHHHHHHHHHHHhHHHH
Confidence            9999999999999999999864   3344455555555444   12        23345788999999999998863   


Q ss_pred             cCCCCCCCCCCCcccchhHHHHHHHHHHHHH
Q 043307          185 NADSENTSGVSKGNYVIGFLCTLGASATYSL  215 (248)
Q Consensus       185 ~~~s~~~~~~~~~~y~lGf~~tL~Asalygl  215 (248)
                      -.+.|..++.++.+...|.+.++.+.++++.
T Consensus       157 ~Ke~~~~~~~~efn~~kGl~iAv~sGv~Sa~  187 (344)
T PF06379_consen  157 MKEKELGEEAKEFNFKKGLIIAVLSGVMSAC  187 (344)
T ss_pred             hhhhhhccchhhhhhhhhHHHHHHHHHHHHH
Confidence            2233333445566788899999888766665

This family includes two characterised members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.; GO: 0015153 rhamnose transmembrane transporter activity, 0008645 hexose transport, 0016021 integral to membrane

>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function

Probab=93.27  E-value=0.64  Score=44.24  Aligned_cols=144  Identities=15%  Similarity=0.080  Sum_probs=96.5

Q ss_pred             cchhHHHHHHHHHHHHhccchHHHHHHHHHhcCCCchhHHHHHhhhCchhhhhhhhhcccCCCCCCCCCCchHHHHHHHH
Q 043307           37 HYKWWLRVILYVVCLLVGQSAATLLGRLYYDKGGNSKWMATFVQSAGFPILLPVLCCFSNGSRSTNKTDPKISTLVCLYV  116 (248)
Q Consensus        37 ~~~~w~lv~~~~~~l~~G~~~~~LL~r~Yy~~gG~s~W~~t~vqtagfPlll~~~~~~~~~~~~~~~~~p~~~~l~~~~~  116 (248)
                      +....+++++..++-.+    +..+... +.++-++.=+..++..-|+.+..|...+..++.-+   .-++..+.....+
T Consensus       166 ~i~GDll~l~~a~lya~----~nV~~E~-~v~~~~~~~~lg~~Glfg~ii~~iq~~ile~~~i~---~~~w~~~~~~~~v  237 (334)
T PF06027_consen  166 PILGDLLALLGAILYAV----SNVLEEK-LVKKAPRVEFLGMLGLFGFIISGIQLAILERSGIE---SIHWTSQVIGLLV  237 (334)
T ss_pred             cchhHHHHHHHHHHHHH----HHHHHHH-hcccCCHHHHHHHHHHHHHHHHHHHHHheehhhhh---ccCCChhhHHHHH
Confidence            34445555554444333    3344553 34455555566889999999988877765432211   1122234444444


Q ss_pred             HHHHHHHHhHHHHHhhhcccchhhHHHHHhhhhHHHHHHHHHHhccccchHHHHHHHHHHHHHHHHhccCCC
Q 043307          117 AFGLLLTGDNMMYSYGLLYLPLSTYSLLCATQLAFNAFFSFFLNSQKFTPFIFNSLVLLTISATLLAVNADS  188 (248)
Q Consensus       117 ~lGvl~a~~n~lYa~gl~yLp~ST~sLi~sTqL~FTAiFs~li~~~kfT~~~insvvLlt~g~~Ll~l~~~s  188 (248)
                      ..++.......+-...+..-++..+++=..|--.++.++..++.++|+++..+.|.++..+|.++..+.+..
T Consensus       238 ~~~~~lf~~y~l~p~~l~~ssAt~~nLsLLTsd~~ali~~i~~f~~~~~~ly~~af~lIiiG~vvy~~~~~~  309 (334)
T PF06027_consen  238 GYALCLFLFYSLVPIVLRMSSATFFNLSLLTSDFYALIIDIFFFGYKFSWLYILAFALIIIGFVVYNLAESP  309 (334)
T ss_pred             HHHHHHHHHHHHHHHHHHhCccceeehHHHHhhHHHHHHHHHhcCccccHHHHHHHHHHHHHhheEEccCCc
Confidence            444444455555567778888888888888888999999999999999999999999999999998776543

Some of the sequences in this family are annotated as putative membrane proteins.

>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]

Probab=91.55  E-value=1.9  Score=40.39  Aligned_cols=158  Identities=23%  Similarity=0.295  Sum_probs=90.9

Q ss_pred             HHHHHHHHHHHhccchHHHHHHHHHhcCCCchhHHHHHhhhCchhhhhhhhhcccCCCCCCCCCCchHHHHHHHHHHHHH
Q 043307           42 LRVILYVVCLLVGQSAATLLGRLYYDKGGNSKWMATFVQSAGFPILLPVLCCFSNGSRSTNKTDPKISTLVCLYVAFGLL  121 (248)
Q Consensus        42 ~lv~~~~~~l~~G~~~~~LL~r~Yy~~gG~s~W~~t~vqtagfPlll~~~~~~~~~~~~~~~~~p~~~~l~~~~~~lGvl  121 (248)
                      +.+.++++.+=.|.+.+..|    |.+-|  .|--|++..+-=-+++.++ +.|++ +|  -..+.. +   .-+..|+-
T Consensus        15 ~~ll~amvsiq~Gas~Ak~L----FP~vG--~~g~t~lRl~~aaLIll~l-~RPwr-~r--~~~~~~-~---~~~~yGvs   80 (292)
T COG5006          15 LALLVAMVSIQSGASFAKSL----FPLVG--AAGVTALRLAIAALILLAL-FRPWR-RR--LSKPQR-L---ALLAYGVS   80 (292)
T ss_pred             HHHHHHHHHHHhhHHHHHHH----ccccC--hhhHHHHHHHHHHHHHHHH-hhHHH-hc--cChhhh-H---HHHHHHHH
Confidence            45556666666666555444    44444  3445555554333333322 33333 32  111212 2   22334666


Q ss_pred             HHHhHHHHHhhhcccchhhHHHHHhhhhHHHHHHHHHHhccccchHHHHHHHHHHHHHHHHhccCCCCCCCCCCCcccch
Q 043307          122 LTGDNMMYSYGLLYLPLSTYSLLCATQLAFNAFFSFFLNSQKFTPFIFNSLVLLTISATLLAVNADSENTSGVSKGNYVI  201 (248)
Q Consensus       122 ~a~~n~lYa~gl~yLp~ST~sLi~sTqL~FTAiFs~li~~~kfT~~~insvvLlt~g~~Ll~l~~~s~~~~~~~~~~y~l  201 (248)
                      .+..|++|=.++..+|-++.-=|--+-..-   ++ .+-.+|..-+.|.++.++-+...+- .+.+.       +.-...
T Consensus        81 Lg~MNl~FY~si~riPlGiAVAiEF~GPL~---vA-~~~sRr~~d~vwvaLAvlGi~lL~p-~~~~~-------~~lDp~  148 (292)
T COG5006          81 LGGMNLLFYLSIERIPLGIAVAIEFTGPLA---VA-LLSSRRLRDFVWVALAVLGIWLLLP-LGQSV-------WSLDPV  148 (292)
T ss_pred             HHHHHHHHHHHHHhccchhhhhhhhccHHH---HH-HHhccchhhHHHHHHHHHHHHhhee-ccCCc-------CcCCHH
Confidence            777788887999999999876444443333   33 2346777778887777654443321 11111       112368


Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 043307          202 GFLCTLGASATYSLYLSLLQLSFEKVIK  229 (248)
Q Consensus       202 Gf~~tL~Asalygl~l~L~ql~f~Kv~k  229 (248)
                      |..++++|.++..+|+.+.    +|+-+
T Consensus       149 Gv~~Al~AG~~Wa~YIv~G----~r~g~  172 (292)
T COG5006         149 GVALALGAGACWALYIVLG----QRAGR  172 (292)
T ss_pred             HHHHHHHHhHHHHHHHHHc----chhcc
Confidence            9999999999999999999    66653

>KOG2922 consensus Uncharacterized conserved protein [Function unknown]

Probab=91.46  E-value=0.062  Score=51.09  Aligned_cols=72  Identities=18%  Similarity=0.219  Sum_probs=64.3

Q ss_pred             HHHHHhHHHHHhhhcccchhhHHHHHhhhhHHHHHHHHHHhccccchHHHHHHHHHHHHHHHHhccCCCCCC
Q 043307          120 LLLTGDNMMYSYGLLYLPLSTYSLLCATQLAFNAFFSFFLNSQKFTPFIFNSLVLLTISATLLAVNADSENT  191 (248)
Q Consensus       120 vl~a~~n~lYa~gl~yLp~ST~sLi~sTqL~FTAiFs~li~~~kfT~~~insvvLlt~g~~Ll~l~~~s~~~  191 (248)
                      +.+++.+..=..++.+=|++.-+=+.+.+.+++|+++.++++||++..-..+-++..+|.+++..|...+++
T Consensus        72 ltm~vGei~NFaAYaFAPasLVtPLGAlsvi~saila~~~L~Ekl~~~g~lGc~l~v~Gst~iV~haP~e~~  143 (335)
T KOG2922|consen   72 LTMIVGEIANFAAYAFAPASLVTPLGALSVIISAILASFFLKEKLNLLGILGCVLCVVGSTTIVIHAPKEQE  143 (335)
T ss_pred             HHHHHHhHhhHHHHhhchHhhhccchhHHHHHHHHHHHHHHHHHHHHhhhhheeEEecccEEEEEecCcccc
Confidence            566777777778899999999999999999999999999999999999999999999999999998866543

>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []

Probab=90.99  E-value=3.5  Score=37.60  Aligned_cols=59  Identities=12%  Similarity=0.248  Sum_probs=50.6

Q ss_pred             hHHHHHhhhcccchhhHHHHHhhhhHHHHHHHHHHhccccchHHHHHHHHHHHHHHHHhc
Q 043307          125 DNMMYSYGLLYLPLSTYSLLCATQLAFNAFFSFFLNSQKFTPFIFNSLVLLTISATLLAV  184 (248)
Q Consensus       125 ~n~lYa~gl~yLp~ST~sLi~sTqL~FTAiFs~li~~~kfT~~~insvvLlt~g~~Ll~l  184 (248)
                      ++..+ +-...-.+-+.+++..+--+++.++|.++.++++|+.+|.++++...|..+-..
T Consensus       239 ~~~i~-~~~~~~~al~~t~v~t~Rk~~sillS~~~f~~~~~~~~~~G~~lv~~g~~~~~~  297 (303)
T PF08449_consen  239 QFFIF-YLIKKFSALTTTIVTTLRKFLSILLSVIIFGHPLSPLQWIGIVLVFAGIFLYSY  297 (303)
T ss_pred             HHHHH-HHHHhcCchhhhhHHHHHHHHHHHHHHHhcCCcCChHHHHHHHHhHHHHHHHHH
Confidence            44444 346778888999999999999999999999999999999999999999887543

; GO: 0055085 transmembrane transport

>COG2962 RarD Predicted permeases [General function prediction only]

Probab=90.52  E-value=1.9  Score=40.57  Aligned_cols=128  Identities=17%  Similarity=0.246  Sum_probs=97.0

Q ss_pred             hHHHHHHHHHhcCCCc-hhHHHH----------HhhhCchhhhhhhhhcc------cCCCC-C-----------------
Q 043307           57 AATLLGRLYYDKGGNS-KWMATF----------VQSAGFPILLPVLCCFS------NGSRS-T-----------------  101 (248)
Q Consensus        57 ~~~LL~r~Yy~~gG~s-~W~~t~----------vqtagfPlll~~~~~~~------~~~~~-~-----------------  101 (248)
                      ...+++|+++...=++ +|++=.          ++..++|..-+-+++++      +|+-+ +                 
T Consensus       111 ~~VllG~lflkErls~~Q~iAV~lA~~GV~~~~~~~g~lpwval~la~sf~~Ygl~RK~~~v~a~~g~~lE~l~l~p~al  190 (293)
T COG2962         111 VNVLLGRLFLKERLSRLQWIAVGLAAAGVLIQTWLLGSLPWVALALALSFGLYGLLRKKLKVDALTGLTLETLLLLPVAL  190 (293)
T ss_pred             HHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHhcCCchHHhHHHHHHHHhHHHH
Confidence            3578899999877776 676543          45667787655555443      12111 0                 


Q ss_pred             -----CCCCC-----chHHHHHHHHHHHHHHHHhHHHHHhhhcccchhhHHHHHhhhhHHHHHHHHHHhccccchHHHHH
Q 043307          102 -----NKTDP-----KISTLVCLYVAFGLLLTGDNMMYSYGLLYLPLSTYSLLCATQLAFNAFFSFFLNSQKFTPFIFNS  171 (248)
Q Consensus       102 -----~~~~p-----~~~~l~~~~~~lGvl~a~~n~lYa~gl~yLp~ST~sLi~sTqL~FTAiFs~li~~~kfT~~~ins  171 (248)
                           -..++     ...+...+.+..|+..+.-=.+|..|.+.+|.||..++.+-...---+.+.++.+|+|+.-+..+
T Consensus       191 ~yl~~l~~~~~~~~~~~~~~~~LLv~aG~vTavpL~lf~~aa~~lpls~~G~lqYi~Ptl~fllav~i~~E~~~~~~~~~  270 (293)
T COG2962         191 IYLLFLADSGQFLQQNANSLWLLLVLAGLVTAVPLLLFAAAAKRLPLSTLGFLQYIEPTLMFLLAVLIFGEPFDSDQLVT  270 (293)
T ss_pred             HHHHHHhcCchhhhcCCchHHHHHHHhhHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHH
Confidence                 01112     13466677888899999999999999999999999999999999999999999999999999888


Q ss_pred             HHHHHHHHHHHhc
Q 043307          172 LVLLTISATLLAV  184 (248)
Q Consensus       172 vvLlt~g~~Ll~l  184 (248)
                      -+++-.|.++.+.
T Consensus       271 F~~IW~aL~l~~~  283 (293)
T COG2962         271 FAFIWLALALFSI  283 (293)
T ss_pred             HHHHHHHHHHHHH
Confidence            8888888877654

>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins

Probab=87.47  E-value=6.4  Score=32.61  Aligned_cols=104  Identities=20%  Similarity=0.187  Sum_probs=70.3

Q ss_pred             chhHHHH-HhhhCchhhhhhhhhcccCCCCCCCCCCchHHHHHHHHHHHHHHHHhHHHHHhhhcccchhhH-HHHHhhhh
Q 043307           72 SKWMATF-VQSAGFPILLPVLCCFSNGSRSTNKTDPKISTLVCLYVAFGLLLTGDNMMYSYGLLYLPLSTY-SLLCATQL  149 (248)
Q Consensus        72 s~W~~t~-vqtagfPlll~~~~~~~~~~~~~~~~~p~~~~l~~~~~~lGvl~a~~n~lYa~gl~yLp~ST~-sLi~sTqL  149 (248)
                      |+|.+++ ....|+-++++.+++.+.+  + .+.-+..|+.....-.+|+++-   +...+....+.+++. .++...|+
T Consensus        29 s~~~as~i~~~~G~i~~~i~~~~~~~~--~-~~~~~~~p~w~~lGG~lG~~~V---~~~~~~vp~lG~~~~~~l~~~GQl  102 (138)
T PF04657_consen   29 SPLVASFISFGVGFILLLIILLITGRP--S-LASLSSVPWWAYLGGLLGVFFV---LSNIILVPRLGAALTTILIVAGQL  102 (138)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHHhccc--c-cchhccCChHHhccHHHHHHHH---HHHHHHhhhhhHHHHHHHHHHHHH
Confidence            4555554 5688998888877776433  1 1111223444445545555444   444456677877765 45678899


Q ss_pred             HHHHHHHHH----HhccccchHHHHHHHHHHHHHHH
Q 043307          150 AFNAFFSFF----LNSQKFTPFIFNSLVLLTISATL  181 (248)
Q Consensus       150 ~FTAiFs~l----i~~~kfT~~~insvvLlt~g~~L  181 (248)
                      ....++=.+    ..|+|+++..+.++.++.+|..+
T Consensus       103 ~~sl~iD~fG~fg~~~~~~~~~r~lG~~l~i~Gv~L  138 (138)
T PF04657_consen  103 IASLLIDHFGLFGAPKRPFSLRRILGLALMIAGVIL  138 (138)
T ss_pred             HHHHHHHHccccCCCCCCCCHHHHHHHHHHHHHHhC
Confidence            999988776    78999999999999999998764

>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function

Probab=87.43  E-value=1  Score=36.76  Aligned_cols=62  Identities=16%  Similarity=0.208  Sum_probs=54.3

Q ss_pred             HHHHHhHHHHHhhhcccchhhHHHH-HhhhhHHHHHHHHHHhccccchHHHHHHHHHHHHHHH
Q 043307          120 LLLTGDNMMYSYGLLYLPLSTYSLL-CATQLAFNAFFSFFLNSQKFTPFIFNSLVLLTISATL  181 (248)
Q Consensus       120 vl~a~~n~lYa~gl~yLp~ST~sLi-~sTqL~FTAiFs~li~~~kfT~~~insvvLlt~g~~L  181 (248)
                      ++....+.+|.+.+..-|.|...=+ ++...+||++.++++-+|..++..+..+.|...|.++
T Consensus        49 ~lNq~GSv~f~~~L~~~dlSlavPi~Nsl~fvfT~l~g~~lge~~~~~~~~~G~~Li~~Gv~L  111 (113)
T PF10639_consen   49 LLNQSGSVLFFLLLGSADLSLAVPIANSLAFVFTALTGWLLGEEVISRRTWLGMALILAGVAL  111 (113)
T ss_pred             HHHHHHHHHHHHHHhcCCceeeehHHhHHHHHHHHHHHHHhcCcccchhHHHHHHHHHcCeee
Confidence            5566778889899999999987777 5999999999999999999899999999999888765

Many members are annotated as potential transmembrane proteins.

>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long

Probab=86.85  E-value=6.8  Score=36.44  Aligned_cols=104  Identities=22%  Similarity=0.217  Sum_probs=71.2

Q ss_pred             CCchhHHHHHhhhCchhhhhhhhhcccCCCCCCCCCCchHHHHHHHHHHHHHHHHhHHHHHhhhcccchhhHHHHHhhhh
Q 043307           70 GNSKWMATFVQSAGFPILLPVLCCFSNGSRSTNKTDPKISTLVCLYVAFGLLLTGDNMMYSYGLLYLPLSTYSLLCATQL  149 (248)
Q Consensus        70 G~s~W~~t~vqtagfPlll~~~~~~~~~~~~~~~~~p~~~~l~~~~~~lGvl~a~~n~lYa~gl~yLp~ST~sLi~sTqL  149 (248)
                      +-+.|-.-+-|.-|-=+--..+.+.. + +      +...|-..--+.-|++|+..|+.|-.+...+-+++.=-+.|+..
T Consensus       161 ~~~~~~~~lPqaiGm~i~a~i~~~~~-~-~------~~~~k~~~~nil~G~~w~ignl~~~is~~~~G~a~af~lSQ~~v  232 (269)
T PF06800_consen  161 HVSGWSAFLPQAIGMLIGAFIFNLFS-K-K------PFFEKKSWKNILTGLIWGIGNLFYLISAQKNGVATAFTLSQLGV  232 (269)
T ss_pred             CCChhHhHHHHHHHHHHHHHHHhhcc-c-c------cccccchHHhhHHHHHHHHHHHHHHHhHHhccchhhhhHHhHHH
Confidence            34556666777777644333332221 1 1      11223334556779999999999999999999999999999999


Q ss_pred             HHHHHHHHHHhccccchHH----HHHHHHHHHHHHH
Q 043307          150 AFNAFFSFFLNSQKFTPFI----FNSLVLLTISATL  181 (248)
Q Consensus       150 ~FTAiFs~li~~~kfT~~~----insvvLlt~g~~L  181 (248)
                      +-..+-+-++.|||=|+..    +.+++|..+|+++
T Consensus       233 vIStlgGI~il~E~Kt~ke~~~~~~G~~Liv~G~il  268 (269)
T PF06800_consen  233 VISTLGGIFILKEKKTKKEMIYTLIGLILIVIGAIL  268 (269)
T ss_pred             HHHHhhhheEEEecCchhhHHHHHHHHHHHHHhhhc
Confidence            9999999999998877653    4445555555443

Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane

>TIGR00688 rarD rarD protein

Probab=85.77  E-value=2.7  Score=36.98  Aligned_cols=44  Identities=23%  Similarity=0.216  Sum_probs=39.1

Q ss_pred             HHHHHHHHHhHHHHHhhhcccchhhHHHHHhhhhHHHHHHHHHH
Q 043307          116 VAFGLLLTGDNMMYSYGLLYLPLSTYSLLCATQLAFNAFFSFFL  159 (248)
Q Consensus       116 ~~lGvl~a~~n~lYa~gl~yLp~ST~sLi~sTqL~FTAiFs~li  159 (248)
                      +.+|+..+....+|.+|++++|+++.+++.+.+++++++++.++
T Consensus       212 ~~~g~~t~i~~~l~~~a~~~~~a~~~s~~~yl~Pv~~~~~~~~~  255 (256)
T TIGR00688       212 VLAGLITGTPLLAFVIAANRLPLNLLGLLQYIGPTIMMLCVSFL  255 (256)
T ss_pred             HHHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHh
Confidence            35556677888999999999999999999999999999999875

This uncharacterized protein is predicted to have many membrane-spanning domains.

>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=85.38  E-value=9.2  Score=36.54  Aligned_cols=106  Identities=15%  Similarity=0.202  Sum_probs=83.6

Q ss_pred             HHHHHHHHHHHHhHHHHHhhhcccchhhHHHHHhhhhHHHHHHHHHHhccccchHHHHHHHHHHHHHHHHhccCCCCCCC
Q 043307          113 CLYVAFGLLLTGDNMMYSYGLLYLPLSTYSLLCATQLAFNAFFSFFLNSQKFTPFIFNSLVLLTISATLLAVNADSENTS  192 (248)
Q Consensus       113 ~~~~~lGvl~a~~n~lYa~gl~yLp~ST~sLi~sTqL~FTAiFs~li~~~kfT~~~insvvLlt~g~~Ll~l~~~s~~~~  192 (248)
                      .-|..+++.-.....+---+++|++.=|..|-=+.|++=+.+-..++-|+|.+...-....|.+.|+.+..+.+++|.+.
T Consensus        84 ~~y~~is~tn~~s~~~~yeaLKyvSyPtq~LaKscKmIPVmlmg~Lvy~~ky~~~eYl~~~LIs~GvsiF~l~~~s~s~~  163 (327)
T KOG1581|consen   84 YKYSLISFTNTLSSWCGYEALKYVSYPTQTLAKSCKMIPVMLMGTLVYGRKYSSFEYLVAFLISLGVSIFSLFPNSDSSS  163 (327)
T ss_pred             hHHhHHHHHhhcchHHHHHHHHhccchHHHHHHHhhhhHHHHHHHHHhcCccCcHHHHHHHHHHhheeeEEEecCCCCcc
Confidence            35666666666666777689999999999999999999999999999999999999999999999999988877666433


Q ss_pred             CCCCcccchhHHHHHHHHHHHHHHHH
Q 043307          193 GVSKGNYVIGFLCTLGASATYSLYLS  218 (248)
Q Consensus       193 ~~~~~~y~lGf~~tL~Asalygl~l~  218 (248)
                      +.-+.+-.+|+.+-.+-=+.=|+...
T Consensus       164 ~~g~~ns~~G~~Ll~~~L~fDgfTn~  189 (327)
T KOG1581|consen  164 KSGRENSPIGILLLFGYLLFDGFTNA  189 (327)
T ss_pred             ccCCCCchHhHHHHHHHHHHHhhHHh
Confidence            33334567898876655555555333

>KOG2766 consensus Predicted membrane protein [Function unknown]

Probab=82.62  E-value=0.056  Score=50.53  Aligned_cols=146  Identities=14%  Similarity=0.228  Sum_probs=100.1

Q ss_pred             CCchhHHHHHhhhCchhhhhhhhhcccCCCCCCCCCCchHHHHHHHHHHHHHHHHhHHHHHhhhcccchhhHHHHHhhhh
Q 043307           70 GNSKWMATFVQSAGFPILLPVLCCFSNGSRSTNKTDPKISTLVCLYVAFGLLLTGDNMMYSYGLLYLPLSTYSLLCATQL  149 (248)
Q Consensus        70 G~s~W~~t~vqtagfPlll~~~~~~~~~~~~~~~~~p~~~~l~~~~~~lGvl~a~~n~lYa~gl~yLp~ST~sLi~sTqL  149 (248)
                      =|-+=.+|++.=+---+..-|+..+++         +..+-...-|+.+|+.=.-.|++-.-+++|..-..-+|+-.--.
T Consensus        45 iN~Pt~QtFl~Y~LLalVY~~~~~fR~---------~~~~~~~~hYilla~~DVEaNy~vV~AyQyTsmtSi~lLDcwai  115 (336)
T KOG2766|consen   45 INAPTSQTFLNYVLLALVYGPIMLFRR---------KYIKAKWRHYILLAFVDVEANYFVVKAYQYTSMTSIMLLDCWAI  115 (336)
T ss_pred             CCCccHHHHHHHHHHHHHHhhHHHhhh---------HHHHHHHHHhhheeEEeecccEEEeeehhhcchHHHHHHHHhhh
Confidence            455667777766554444444444321         22222222388888877788988888999999988888888888


Q ss_pred             HHHHHHHHHHhccccchHHHHHHHHHHHHHHHHhccC--CCCCCCCCCCcccchhHHHHHHHH-----------------
Q 043307          150 AFNAFFSFFLNSQKFTPFIFNSLVLLTISATLLAVNA--DSENTSGVSKGNYVIGFLCTLGAS-----------------  210 (248)
Q Consensus       150 ~FTAiFs~li~~~kfT~~~insvvLlt~g~~Ll~l~~--~s~~~~~~~~~~y~lGf~~tL~As-----------------  210 (248)
                      .-..++++++++-|--..++.+|+.+.+|.+++...|  .+|+..   +.+...|..+.+++|                 
T Consensus       116 p~v~~lsw~fLktrYrlmki~gV~iCi~GvvmvV~sDV~agd~ag---gsnp~~GD~lvi~GATlYaVSNv~EEflvkn~  192 (336)
T KOG2766|consen  116 PCVLVLSWFFLKTRYRLMKISGVVICIVGVVMVVFSDVHAGDRAG---GSNPVKGDFLVIAGATLYAVSNVSEEFLVKNA  192 (336)
T ss_pred             HHHHHHHHHHHHHHHhhheeeeEEeEecceEEEEEeeeccccccC---CCCCccCcEEEEecceeeeeccccHHHHHhcC
Confidence            8899999999999999999999999999999876544  233321   223445555444444                 


Q ss_pred             ---------HHHHHHHHHHHHHHHHh
Q 043307          211 ---------ATYSLYLSLLQLSFEKV  227 (248)
Q Consensus       211 ---------alygl~l~L~ql~f~Kv  227 (248)
                               -+||-+.+.+|..|++.
T Consensus       193 d~~elm~~lgLfGaIIsaIQ~i~~~~  218 (336)
T KOG2766|consen  193 DRVELMGFLGLFGAIISAIQFIFERH  218 (336)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHhhhcc
Confidence                     35666777777777753

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	248
3b5d_A	110	Multidrug transporter EMRE; helical membrane prote	97.82
2i68_A	137	Protein EMRE; transmembrane protein, small-multidr	97.77

>3b5d_A Multidrug transporter EMRE; helical membrane protein, multidrug resistance transporter, SMR, antiport, inner membrane, transmembrane; HET: P4P; 3.80A {Escherichia coli K12} PDB: 3b61_A 3b62_A*

Probab=97.82  E-value=0.00012  Score=57.05  Aligned_cols=68  Identities=9%  Similarity=0.156  Sum_probs=61.1

Q ss_pred             HHHHHHhHHHHHhhhcccchhhHHHH-HhhhhHHHHHHHHHHhccccchHHHHHHHHHHHHHHHHhccC
Q 043307          119 GLLLTGDNMMYSYGLLYLPLSTYSLL-CATQLAFNAFFSFFLNSQKFTPFIFNSLVLLTISATLLAVNA  186 (248)
Q Consensus       119 Gvl~a~~n~lYa~gl~yLp~ST~sLi-~sTqL~FTAiFs~li~~~kfT~~~insvvLlt~g~~Ll~l~~  186 (248)
                      .+.++..-++++++++++|.|+..-+ ..+..+++++.+.++.+|++|+.++.++++..+|..++.+.+
T Consensus        37 ~~~~~~~~~~~~~al~~~p~s~ay~i~~g~~~v~~~l~~~~~~~E~~s~~~~~Gi~lIi~Gv~~l~~~~  105 (110)
T 3b5d_A           37 IICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLLS  105 (110)
T ss_pred             HHHHHHHHHHHHHHHHhCChhhHHHHHhhHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcCC
Confidence            34566777899999999999998777 899999999999999999999999999999999999987654

>2i68_A Protein EMRE; transmembrane protein, small-multidrug resistance, transporter, homodimer, dual topology, transport protein; NMR {Escherichia coli}

Probab=97.77  E-value=4.1e-05  Score=62.54  Aligned_cols=67  Identities=9%  Similarity=0.180  Sum_probs=49.1

Q ss_pred             HHHHHhHHHHHhhhcccchhhHHHH-HhhhhHHHHHHHHHHhccccchHHHHHHHHHHHHHHHHhccC
Q 043307          120 LLLTGDNMMYSYGLLYLPLSTYSLL-CATQLAFNAFFSFFLNSQKFTPFIFNSLVLLTISATLLAVNA  186 (248)
Q Consensus       120 vl~a~~n~lYa~gl~yLp~ST~sLi-~sTqL~FTAiFs~li~~~kfT~~~insvvLlt~g~~Ll~l~~  186 (248)
                      +.++..-++++++++++|+|+..-+ .....++++++++++.+|++|+.++.++++..+|..++...+
T Consensus        38 ~~~~ls~~l~~~alk~i~~s~ay~iw~~l~pv~~~l~g~l~lgE~ls~~~~~Gi~LIi~GV~ll~~~~  105 (137)
T 2i68_A           38 ICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLLS  105 (137)
T ss_dssp             HHHHHHHHHHHHHHC-----CHHHHHHHHHHHHHHHHHHHHHC------CHHHHHHHHHHHHHHHHC-
T ss_pred             HHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcCC
Confidence            4566677899999999999977776 899999999999999999999999999999999999988754

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00