Citrus Sinensis ID: 043369

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520------
MERKNSVCLLIAICCFSNLALGSQDLEGKWKLLKRSIGVSAMHMALLPNDRIIAFDRSHFGPSNITLPQGKCIKGVELETSDCYAHAVEFDPITRKVRPLTIQTDTWCSSGALLANGVLVQTGGYRLGERVVRYLKPCSDCDWEEDHQNGLISPRWYASNQILPNGKIIVVGGRFQFTYEFIPRTSDSDRKILYQLPFLKETMHSPKIPNNLYPFLHLSTDGNLFIFANDRAILLDYVNNRVMKNYPVMPGGISRNYPSTGSSVLLPVNLSSINVHINNNNKPVVHSQVLICGGTLPDSNENAAEAQIFLPAAKSCGRLTITAQNPKWEMEEMPLNRVMGDMILLPTGDVLIINGAAKGTAGWGAAREPVLNPVIYCPKINRFRILSPSLIPRLYHSTAHLLSDGRVLVGGSNPNVNYNFSALFPTELSLQAFYPPYFNLMSNRSRPSISTVKPGAFLKLKYTENFLLGFKLRSGDLGEIFVTMVAPSFTTHSFAMNQRLLVLELHGALFLVNDGVPSKAVWVQMK
ccccccHHHHHHHHHHccccccccccccEEEEccccccccEEEEEEccccEEEEEEEccccccccccccccccccccccccccccccEEEEcccccEEEccccccccccccEEcccccEEEEccccccccEEEEEcccccccccccccccccccccccEEEEEccccEEEEcccccccccccccccccccccccccccccccccccccccccccEEEEcccccEEEEEcccEEEEEccccEEEEEcccccccccccccccccEEEEcccccccccccccccccccccEEEEEccccccccccHHcccccccccccccEEEEEccccccEEcccccccccccEEEcccccEEEEccccccccccccccccccccEEEEcccccEEEcccccccccEEEEEEEcccccEEEEccccccccccccccccccEEEEEcccccccccccccccEEEccccccEEEEEEEEEEEEEEEEcccccEEEEEEEccccccccccccccEEEcccEEEEEEEccccccccEEEEEc
cccHHHHHHHHHHHHHHccccccccccccEEEEcccccccHEEEEEccccEEEEEEccccccccccccccccccccccccccccEEEEEEccccccEEEcccccccEcccccEccccEEEEEccccccccEEEEEcccccccEEEcccccccccccccccEEcccccEEEEEcccccccEEcccccccccccccccccHccccccccccccccEEEEEcccccEEEEEccccEEEEcccccEEEEcccccccccccccccccEEEccccccccccccccccccccccEEEEEccccccccccHHccccccccccccccEEcccccccEEEcccccccccccEEEcccccEEEEEccccccccccccccEccccEEEEccccEEEEcccccccccccEEEEEcccccEEEEEcccccccccccccccEEEEEEEccccccccccccccEEEEEccccccEEccccEEEEEEEccccccccEEEEEEccccEEcccccccEEEEccccEEEEEEcccccccEEEEEEc
MERKNSVCLLIAICCfsnlalgsqdLEGKWKLLKRSIGVSAMHmallpndriiafdrshfgpsnitlpqgkcikgveletsdcyahavefdpitrkvrpltiqtdtwcssgallangvlvqtggyrlgervvrylkpcsdcdweedhqnglisprwyasnqilpngkiivvggrfqftyefiprtsdsdrkilyqlpflketmhspkipnnlypflhlstdgnlfifANDRAILLDYvnnrvmknypvmpggisrnypstgssvllpvnlssinvhinnnnkpvvHSQVlicggtlpdsnenaAEAQIFLpaakscgrltitaqnpkwemeemplnrvmgdmillptgdVLIINGaakgtagwgaarepvlnpviycpkinrfrilspsliprlyHSTAhllsdgrvlvggsnpnvnynfsalfptelslqafyppyfnlmsnrsrpsistvkpgafLKLKYTENFLLGfklrsgdlgEIFVTmvapsftthsfAMNQRLLVLELHGALflvndgvpsKAVWVQMK
MERKNSVCLLIAICCFSNLALGSQDLEGKWKLLKRSIGVSAMHMALLPNDRIIAFDRSHFGPSNITLPQGKCIKGVELETSDCYAHAVefdpitrkvRPLTIQTDTWCSSGALLANGVLVQTGGYRLGERVVRYLKPCSDCDWEEDHQNGLISPRWYASNQILPNGKIIVVGGRFQFTYEfiprtsdsdrKILYQLPFLKETMHSPKIPNNLYPFLHLSTDGNLFIFANDRAILLDYVNNRVMKNYPVMPGGISRNYPSTGSSVLLPVNLSSINVHINNNNKPVVHSQVLICGGTLPDSNENAAEAQIFlpaakscgrlTITAQNPKWEMEEMPLNRVMGDMILLPTGDVLIINGAAKGTAGWGAAREPVLNPVIYCPKINRFRILSPSLIPRLYHSTAHLLSDGRVLVGGSNPNVNYNFSALFPTELSLQAFYPPYFNLMSNRSRPSISTVKPGAFLKLKYTENFLLGFKLRSGDLGEIFVTMVAPSFTTHSFAMNQRLLVLELHGALFLVNDGVPSKAVWVQMK
MERKNSVCLLIAICCFSNLALGSQDLEGKWKLLKRSIGVSAMHMALLPNDRIIAFDRSHFGPSNITLPQGKCIKGVELETSDCYAHAVEFDPITRKVRPLTIQTDTWCSSGALLANGVLVQTGGYRLGERVVRYLKPCSDCDWEEDHQNGLISPRWYASNQILPNGKIIVVGGRFQFTYEFIPRTSDSDRKILYQLPFLKETMHSPKIPNNLYPFLHLSTDGNLFIFANDRAILLDYVNNRVMKNYPVMPGGISRNYPSTGSSVLLPVNLSSINVHINNNNKPVVHSQVLICGGTLPDSNENAAEAQIFLPAAKSCGRLTITAQNPKWEMEEMPLNRVMGDMILLPTGDVLIINgaakgtagwgaaREPVLNPVIYCPKINRFRILSPSLIPRLYHSTAHLLSDGRVLVGGSNPNVNYNFSALFPTELSLQAFYPPYFNLMSNRSRPSISTVKPGAFLKLKYTENFLLGFKLRSGDLGEIFVTMVAPSFTTHSFAMNQRLLVLELHGALFLVNDGVPSKAVWVQMK
******VCLLIAICCFSNLALGSQDLEGKWKLLKRSIGVSAMHMALLPNDRIIAFDRSHFGPSNITLPQGKCIKGVELETSDCYAHAVEFDPITRKVRPLTIQTDTWCSSGALLANGVLVQTGGYRLGERVVRYLKPCSDCDWEEDHQNGLISPRWYASNQILPNGKIIVVGGRFQFTYEFIPRTSDSDRKILYQLPFLKETMHSPKIPNNLYPFLHLSTDGNLFIFANDRAILLDYVNNRVMKNYPVMPGGISRNYPSTGSSVLLPVNLSSINVHINNNNKPVVHSQVLICGGTLPDSNENAAEAQIFLPAAKSCGRLTITAQNPKWEMEEMPLNRVMGDMILLPTGDVLIINGAAKGTAGWGAAREPVLNPVIYCPKINRFRILSPSLIPRLYHSTAHLLSDGRVLVGGSNPNVNYNFSALFPTELSLQAFYPPYFNLMSNRSRPSISTVKPGAFLKLKYTENFLLGFKLRSGDLGEIFVTMVAPSFTTHSFAMNQRLLVLELHGALFLVNDGVPSKAVWV***
****NSVCLLIAICCFSNLALGSQDLEGKWKLLKRSIGVSAMHMALLPNDRIIAFDRSHFGPSNITLPQGKCIKGVELETSDCYAHAVEFDPITRKVRPLTIQTDTWCSSGALLANGVLVQTGGYRLGERVVRYLKPCSDCDWEEDHQNGLISPRWYASNQILPNGKIIVVGGRFQFTYEFIPRTSDSDRKILYQLPFLKETMHSPKIPNNLYPFLHLSTDGNLFIFANDRAILLDYVNNRVMKNYPVMPGGISRNYPSTGSSVLLPVNLSSINVHINNNNKPVVHSQVLICGGTLPDSNENAAEAQIFLPAAKSCGRLTITAQNPKWEMEEMPLNRVMGDMILLPTGDVLIINGAAKGTAGWGAAREPVLNPVIYCPKINRFRILSPSLIPRLYHSTAHLLSDGRVLVGGSNPNVNYNFSALFPTELSLQAFYPPYFNLMSNRSRPSISTVKPGAFLKLKYTENFLLGFKLRSGDLGEIFVTMVAPSFTTHSFAMNQRLLVLELHGALFLVNDGVPSKAVWVQMK
MERKNSVCLLIAICCFSNLALGSQDLEGKWKLLKRSIGVSAMHMALLPNDRIIAFDRSHFGPSNITLPQGKCIKGVELETSDCYAHAVEFDPITRKVRPLTIQTDTWCSSGALLANGVLVQTGGYRLGERVVRYLKPCSDCDWEEDHQNGLISPRWYASNQILPNGKIIVVGGRFQFTYEFIPRTSDSDRKILYQLPFLKETMHSPKIPNNLYPFLHLSTDGNLFIFANDRAILLDYVNNRVMKNYPVMPGGISRNYPSTGSSVLLPVNLSSINVHINNNNKPVVHSQVLICGGTLPDSNENAAEAQIFLPAAKSCGRLTITAQNPKWEMEEMPLNRVMGDMILLPTGDVLIINGAAKGTAGWGAAREPVLNPVIYCPKINRFRILSPSLIPRLYHSTAHLLSDGRVLVGGSNPNVNYNFSALFPTELSLQAFYPPYFNLMSNRSRPSISTVKPGAFLKLKYTENFLLGFKLRSGDLGEIFVTMVAPSFTTHSFAMNQRLLVLELHGALFLVNDGVPSKAVWVQMK
**RKNSVCLLIAICCFSNLALGSQDLEGKWKLLKRSIGVSAMHMALLPNDRIIAFDRSHFGPSNITLPQGKCIKGVELETSDCYAHAVEFDPITRKVRPLTIQTDTWCSSGALLANGVLVQTGGYRLGERVVRYLKPCSDCDWEEDHQNGLISPRWYASNQILPNGKIIVVGGRFQFTYEFIPRTSDSDRKILYQLPFLKETMHSPKIPNNLYPFLHLSTDGNLFIFANDRAILLDYVNNRVMKNYPVMPGGISRNYPSTGSSVLLPVNLSSINVHINNNNKPVVHSQVLICGGTLPDSNENAAEAQIFLPAAKSCGRLTITAQNPKWEMEEMPLNRVMGDMILLPTGDVLIINGAAKGTAGWGAAREPVLNPVIYCPKINRFRILSPSLIPRLYHSTAHLLSDGRVLVGGSNPNVNYNFSALFPTELSLQAFYPPYFNLMSNRSRPSISTVKPGAFLKLKYTENFLLGFKLRSGDLGEIFVTMVAPSFTTHSFAMNQRLLVLELHGALFLVNDGVPSKAVWVQMK
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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SSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MERKNSVCLLIAICCFSNLALGSQDLEGKWKLLKRSIGVSAMHMALLPNDRIIAFDRSHFGPSNITLPQGKCIKGVELETSDCYAHAVEFDPITRKVRPLTIQTDTWCSSGALLANGVLVQTGGYRLGERVVRYLKPCSDCDWEEDHQNGLISPRWYASNQILPNGKIIVVGGRFQFTYEFIPRTSDSDRKILYQLPFLKETMHSPKIPNNLYPFLHLSTDGNLFIFANDRAILLDYVNNRVMKNYPVMPGGISRNYPSTGSSVLLPVNLSSINVHINNNNKPVVHSQVLICGGTLPDSNENAAEAQIFLPAAKSCGRLTITAQNPKWEMEEMPLNRVMGDMILLPTGDVLIINGAAKGTAGWGAAREPVLNPVIYCPKINRFRILSPSLIPRLYHSTAHLLSDGRVLVGGSNPNVNYNFSALFPTELSLQAFYPPYFNLMSNRSRPSISTVKPGAFLKLKYTENFLLGFKLRSGDLGEIFVTMVAPSFTTHSFAMNQRLLVLELHGALFLVNDGVPSKAVWVQMK
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query526 2.2.26 [Sep-21-2011]
I1S2N3680 Galactose oxidase OS=Gibb no no 0.764 0.591 0.229 8e-07
P0CS93680 Galactose oxidase OS=Gibb no no 0.764 0.591 0.229 8e-07
>sp|I1S2N3|GAOA_GIBZE Galactose oxidase OS=Gibberella zeae (strain PH-1 / ATCC MYA-4620 / FGSC 9075 / NRRL 31084) GN=GAOA PE=3 SV=1 Back     alignment and function desciption
 Score = 55.8 bits (133), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 105/457 (22%), Positives = 172/457 (37%), Gaps = 55/457 (12%)

Query: 89  EFDPITRKVRPLTI---QTDTWCSSGALLANGVLVQTGGYRLGERVVRYLKPCSDCDW-- 143
            +DP T  V   T+   + D +C   ++  NG +V TGG    +     L   S   W  
Sbjct: 247 SWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGG---NDAKKTSLYDSSSDSWIP 303

Query: 144 EEDHQNGLISPRWYASNQILPNGKIIVVGGRFQF-TYEFIPRTSDSDRKILYQLPFLKET 202
             D Q      R Y S+  + +G++  +GG +    +E          K    LP  K  
Sbjct: 304 GPDMQ----VARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTSLPNAKVN 359

Query: 203 MHSPKIPNNLYPFLHLSTDGNLFIFANDRAILLDYVNNRVMKNYPVMPGGISRNYPSTGS 262
                    LY      +D + ++F   +  +     +  M  Y     G  ++     S
Sbjct: 360 PMLTADKQGLY-----RSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQS 414

Query: 263 SVLLPVNLSSINVHINNNNKPVVHSQVLICGGTLPDSNENAAEAQIFLPAAKSCGRLTIT 322
           +  +  +    N  + +     V  ++L  GG+ PD  ++ A     +      G    T
Sbjct: 415 NRGVAPDAMCGNAVMYD----AVKGKILTFGGS-PDYQDSDATTNAHIITLGEPG----T 465

Query: 323 AQNPKWEMEEMPLNRVMGDMILLPTGDVLIINGAAKGTAGWGAAREPVLNPVIYCPKINR 382
           + N  +    +   R     ++LP G   I  G  +G         PV  P IY P+ + 
Sbjct: 466 SPNTVFASNGLYFARTFHTSVVLPDGSTFITGGQRRGIPF--EDSTPVFTPEIYVPEQDT 523

Query: 383 FRILSPSLIPRLYHSTAHLLSDGRVLVGGSN--PNVNYNFSALFPTELSLQAFYPPY-FN 439
           F   +P+ I R+YHS + LL DGRV  GG     +   N           Q F P Y +N
Sbjct: 524 FYKQNPNSIVRVYHSISLLLPDGRVFNGGGGLCGDCTTN-------HFDAQIFTPNYLYN 576

Query: 440 LMSN-RSRPSIS-----TVKPGAFLKLKYTENFLLGFKLRSG--------DLGEIFVTMV 485
              N  +RP I+     +VK G  + +    +      +R G        D   I +T+ 
Sbjct: 577 SNGNLATRPKITRTSTQSVKVGGRITISTDSSITKASLIRYGTATHTVNTDQRRIPLTLT 636

Query: 486 APSFTTHSFAM-NQRLLVLELHGALFLVND-GVPSKA 520
                ++SF + +   + L  +  LF++N  GVPS A
Sbjct: 637 NNGGNSYSFQVPSDSGVALPGYWMLFVMNSAGVPSVA 673
Catalyzes the sterospecific oxidation of primary alcohols to the corresponding aldehydes. The biologically relevant substrate of the enzyme is not known as the enzyme exhibits broad substrate specificity from small alcohols through sugars to oligo- and polysaccharides (By similarity).
Gibberella zeae (strain PH-1 / ATCC MYA-4620 / FGSC 9075 / NRRL 31084) (taxid: 229533)
EC: 1EC: .EC: 1EC: .EC: 3EC: .EC: 9
>sp|P0CS93|GAOA_GIBZA Galactose oxidase OS=Gibberella zeae GN=GAOA PE=1 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query526
224057992546 predicted protein [Populus trichocarpa] 0.969 0.934 0.642 0.0
255555755546 Galactose oxidase precursor, putative [R 0.933 0.899 0.635 0.0
225426582544 PREDICTED: uncharacterized protein LOC10 0.958 0.926 0.588 1e-179
147857128549 hypothetical protein VITISV_026965 [Viti 0.958 0.918 0.583 1e-177
357966935545 galactose oxidase [Ziziphus jujuba] 0.937 0.904 0.506 1e-143
255538846547 Galactose oxidase precursor, putative [R 0.914 0.879 0.491 1e-139
225458077553 PREDICTED: galactose oxidase-like [Vitis 0.916 0.871 0.491 1e-139
255558230567 conserved hypothetical protein [Ricinus 0.931 0.864 0.495 1e-135
356501926560 PREDICTED: uncharacterized protein LOC10 0.952 0.894 0.483 1e-135
225424897 874 PREDICTED: uncharacterized protein LOC10 0.923 0.556 0.498 1e-134
>gi|224057992|ref|XP_002299426.1| predicted protein [Populus trichocarpa] gi|222846684|gb|EEE84231.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
 Score =  702 bits (1813), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 361/562 (64%), Positives = 427/562 (75%), Gaps = 52/562 (9%)

Query: 1   MERKNSVCLLIAICCFSNLALGSQDLEGKWKLLKRSIGVSAMHMALLPNDRIIAFDRSHF 60
           M  K+ VCL++       LALGSQ   GKWKLLKRSIG+SAMHM LLPND+IIAFD +  
Sbjct: 1   MTTKSLVCLILVTSSLFTLALGSQTHRGKWKLLKRSIGISAMHMQLLPNDKIIAFDWNS- 59

Query: 61  GPSNITLPQGKCIKGVELETSDCYAHAVEFDPITRKVRPLTIQTDTWCSSGALLANGVLV 120
           GPSNI+LP GKC+   E  T++CY+H+VEFDP +R +RPLTI TDTWCSSGALL NG+L+
Sbjct: 60  GPSNISLPGGKCVVASE-TTTNCYSHSVEFDPSSRSIRPLTITTDTWCSSGALLQNGILI 118

Query: 121 QTGGYRLGERVVRYLKPCSDCDWEEDHQNGLISPRWYASNQILPNGKIIVVGGRFQFTYE 180
           Q+GG+RLG+RVVR L PC++CDW E  +NGLI+ RWYASNQILPNGKIIVVGG  QF YE
Sbjct: 119 QSGGFRLGDRVVRSLTPCANCDWVEK-KNGLITSRWYASNQILPNGKIIVVGGLNQFNYE 177

Query: 181 FIPRTSDSDRKILYQLPFLKETMHSPKIPNNLYPFLHLSTDGNLFIFANDRAILLDYVNN 240
           FIP+TS SD + LYQLPFL+ET +SP IPNNLYPFLHL+  G LFIFANDRAILLD+VNN
Sbjct: 178 FIPKTSTSD-QTLYQLPFLEETRYSPLIPNNLYPFLHLTPGGKLFIFANDRAILLDHVNN 236

Query: 241 RVMKNYPVMPGGISRNYPSTGSSVLLPVNLSSINVHINNNNKPVVHSQVLICGGTLPDSN 300
           +V+KNYPVMPGG+SRNYPSTGSSVLLP+ LSS     N N+ P   + V ICGGT+PDSN
Sbjct: 237 KVVKNYPVMPGGVSRNYPSTGSSVLLPLILSS-----NFNSHP--EAAVFICGGTVPDSN 289

Query: 301 ENAAEAQIFLPAAKSCGRLTITAQNPKWEMEEMPLNRVMGDMILLPTGDVLIINGAAKGT 360
           +    A +F+ A+KSCGRL ITA NP WEMEEMPLNR+MGDMILLPTGDVLIINGAAKG+
Sbjct: 290 QKV-NAGVFITASKSCGRLVITANNPSWEMEEMPLNRLMGDMILLPTGDVLIINGAAKGS 348

Query: 361 AGWGAAREPVLNPVIYCP------KINRFRILSPSLIPRLYHSTAHLLSDGRVLVGGSNP 414
           AGW A REPVLNPV+Y P      K +RF I+SPS IPRLYHSTAHLLSDGRVLVGGSNP
Sbjct: 349 AGWYAGREPVLNPVLYRPNAPITAKTSRFEIMSPSKIPRLYHSTAHLLSDGRVLVGGSNP 408

Query: 415 NVNYNFSALFPTELSLQAFYPPYFNLMSNRSRPSISTVKPGAFLKLKYTENFLLGFKLRS 474
           N NYNF+AL+PTELS++ FYPPYF+   N SRP IS + PG    L+Y + F + F +  
Sbjct: 409 NSNYNFTALYPTELSVEVFYPPYFS--PNVSRPLISKINPGT--NLEYKQKFTMHFHIHQ 464

Query: 475 --GDLGEIFVTMVAPSFTTHSFAMNQRLLVLEL--------------------------- 505
              +LG+I+VTMVAPSFT+HS++MNQRLLVL L                           
Sbjct: 465 WHEELGKIYVTMVAPSFTSHSYSMNQRLLVLALDSEAQKVDFSNYVVDVHAPATATLAPP 524

Query: 506 -HGALFLVNDGVPSKAVWVQMK 526
            +  LF+V++GVPSK  WV +K
Sbjct: 525 GYYQLFVVHEGVPSKGTWVHIK 546

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|255555755|ref|XP_002518913.1| Galactose oxidase precursor, putative [Ricinus communis] gi|223541900|gb|EEF43446.1| Galactose oxidase precursor, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|225426582|ref|XP_002272723.1| PREDICTED: uncharacterized protein LOC100259927 [Vitis vinifera] gi|297742440|emb|CBI34589.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|147857128|emb|CAN83495.1| hypothetical protein VITISV_026965 [Vitis vinifera] Back     alignment and taxonomy information
>gi|357966935|gb|AET97563.1| galactose oxidase [Ziziphus jujuba] Back     alignment and taxonomy information
>gi|255538846|ref|XP_002510488.1| Galactose oxidase precursor, putative [Ricinus communis] gi|223551189|gb|EEF52675.1| Galactose oxidase precursor, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|225458077|ref|XP_002280559.1| PREDICTED: galactose oxidase-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|255558230|ref|XP_002520142.1| conserved hypothetical protein [Ricinus communis] gi|223540634|gb|EEF42197.1| conserved hypothetical protein [Ricinus communis] Back     alignment and taxonomy information
>gi|356501926|ref|XP_003519774.1| PREDICTED: uncharacterized protein LOC100813021 [Glycine max] Back     alignment and taxonomy information
>gi|225424897|ref|XP_002269734.1| PREDICTED: uncharacterized protein LOC100253553 [Vitis vinifera] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query526
TAIR|locus:2035408548 AT1G19900 "AT1G19900" [Arabido 0.884 0.848 0.504 1.5e-123
TAIR|locus:2005664547 AT1G75620 "AT1G75620" [Arabido 0.866 0.833 0.497 8.4e-121
TAIR|locus:2076696547 AT3G57620 "AT3G57620" [Arabido 0.918 0.882 0.430 9.5e-103
TAIR|locus:2180791594 AT5G19580 "AT5G19580" [Arabido 0.876 0.776 0.423 1.5e-102
TAIR|locus:2019564615 GLOX1 "AT1G67290" [Arabidopsis 0.910 0.778 0.415 1.1e-99
TAIR|locus:2084480545 AT3G53950 "AT3G53950" [Arabido 0.878 0.847 0.418 1.3e-92
TAIR|locus:2035408 AT1G19900 "AT1G19900" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1179 (420.1 bits), Expect = 1.5e-123, Sum P(2) = 1.5e-123
 Identities = 247/490 (50%), Positives = 321/490 (65%)

Query:    23 SQDLEGKWKLLKRSIGVSAMHMALLPNDRIIAFDRSHFGPSNITLPQGKCIKGVELETS- 81
             S    G WK +  ++G+SAMHM LL NDR++ +DR++FGPSNI+LP G C    +   S 
Sbjct:    26 SSAARGLWKYIAPNVGISAMHMQLLHNDRVVMYDRTNFGPSNISLPNGNCRDNPQDAVSK 85

Query:    82 -DCYAHAVEFDPITRKVRPLTIQTDTWCSSGALLANGVLVQTGGYRLGERVVRYLKPCSD 140
              DC AH++E+D  T  +RPLT+Q++TWCSSG++  +GVLVQTGG R GE   R   PC++
Sbjct:    86 IDCTAHSIEYDVATNTIRPLTVQSNTWCSSGSVRPDGVLVQTGGDRDGELKTRTFSPCNN 145

Query:   141 --CDWEEDHQNGLISPRWYASNQILPNGKIIVVGGRFQFTYEFIPRTSDSDRKILYQLPF 198
               CDW E + NGL   RWYASN ILP+GK IV+GG+ QF YEF P+T++ +   +  LPF
Sbjct:   146 NQCDWVEMN-NGLKKRRWYASNHILPDGKQIVMGGQGQFNYEFFPKTTNPN---VVALPF 201

Query:   199 LKETMHSPKIPNNLYPFLHLSTDGNLFIFANDRAILLDYVNNRVMKNYPVMPGGISRNYP 258
             L ET H     NNLYPF+ ++TDGNLF+FAN+RAILLDYV N V+K +P +PGG  RNYP
Sbjct:   202 LAET-HDQGQENNLYPFVFMNTDGNLFMFANNRAILLDYVKNTVVKTFPAIPGGDPRNYP 260

Query:   259 STGSSVLLPVNLSSINVHINNNNKPVVHSQVLICGGTLPDSNENAAEAQIFLPAAKSCGR 318
             STGS+VLLP+     N+  +N     V ++VL+CGG  P  + N A  + F+ A  +C R
Sbjct:   261 STGSAVLLPLK----NLEADN-----VETEVLVCGGA-PKGSYNLARKKTFVKALDTCAR 310

Query:   319 LTITAQNPKWEMEEMPLNRVMGDMILLPTGDVLIINXXXXXXXXXXXXREPVLNPVIYCP 378
             + I    P+W +E+MP  RVMGDMI LP GDVL+IN            R PVL P +Y P
Sbjct:   311 IKINDAKPEWAVEKMPHARVMGDMIPLPNGDVLLINGGSFGTAAWELGRTPVLAPDLYHP 370

Query:   379 KI---NRFRILSPSLIPRLYHSTAHLLSDGRVLVGGSNPNVNYNFSA-LFPTELSLQAFY 434
             +    +RF  L P+ IPR+YHS A LL DGRVLVGGSNP+  YN++  LFPTELSL+AF 
Sbjct:   371 ENPVGSRFESLRPTTIPRMYHSAAILLRDGRVLVGGSNPHAFYNYTGVLFPTELSLEAFS 430

Query:   435 PPYFNLMSNRSRPSISTVKPGAFLKLKYTENFLLGFKLRSGDLGEIFVTMVAPSFTTHSF 494
             P Y     +  RP I + +P + +K  Y  N  L F +         VTMV P+FTTHSF
Sbjct:   431 PVYLQREFSNLRPKIISPEPQSMIK--YGTNLKLKFSVTGEVTTPAKVTMVFPTFTTHSF 488

Query:   495 AMNQRLLVLE 504
             AMNQR+LVL+
Sbjct:   489 AMNQRVLVLD 498
GO:0003674 "molecular_function" evidence=ND
GO:0005576 "extracellular region" evidence=ISM
GO:0008150 "biological_process" evidence=ND
TAIR|locus:2005664 AT1G75620 "AT1G75620" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2076696 AT3G57620 "AT3G57620" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2180791 AT5G19580 "AT5G19580" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2019564 GLOX1 "AT1G67290" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2084480 AT3G53950 "AT3G53950" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query526
pfam07250243 pfam07250, Glyoxal_oxid_N, Glyoxal oxidase N-termi 1e-107
cd02851103 cd02851, E_set_GO_C, C-terminal Early set domain a 4e-15
pfam0911897 pfam09118, DUF1929, Domain of unknown function (DU 4e-13
>gnl|CDD|219349 pfam07250, Glyoxal_oxid_N, Glyoxal oxidase N-terminus Back     alignment and domain information 
 Score =  320 bits (821), Expect = e-107
 Identities = 135/258 (52%), Positives = 170/258 (65%), Gaps = 20/258 (7%)

Query: 42  MHMALLPNDRIIAFDRSHFGPSNITLPQGKCIK--GVELETSDCYAHAVEFDPITRKVRP 99
           MHM LL N+++I FDR++FGPSNI+LP G+C    G      DC AH+V +D  T  +RP
Sbjct: 1   MHMQLLHNNKVIMFDRTNFGPSNISLPPGRCRPDPGDAPLKIDCSAHSVLYDVATNTIRP 60

Query: 100 LTIQTDTWCSSGALLANGVLVQTGGYRLGERVVRYLKPCSD---CDWEEDHQNGLISPRW 156
           LT+QTDTWCSSGALL++G LVQTGG   GER VRY  PC     CDW E     L + RW
Sbjct: 61  LTVQTDTWCSSGALLSDGTLVQTGGDGDGERKVRYFSPCDSNDTCDWIEF-PATLAARRW 119

Query: 157 YASNQILPNGKIIVVGGRFQFTYEFIPRTSDSDRKILYQLPFLKETMHSPKIPNNLYPFL 216
           YA+NQILP+G  I++GGR  F YEF P+   + R     L FL+ET       NNLYPF+
Sbjct: 120 YATNQILPDGSFIIIGGRRAFNYEFFPKKGQNPR--ASALRFLRET--EDSQENNLYPFV 175

Query: 217 HLSTDGNLFIFANDRAILLDYVNNRVMKNYPVMPGGISRNYPSTGSSVLLPVNLSSINVH 276
            L  DGNLFIFAN+R+IL DY  N V+K +P +PGG  RNYPS+GSSVLLP         
Sbjct: 176 FLLPDGNLFIFANNRSILFDYRKNTVVKEFPQIPGG-PRNYPSSGSSVLLP--------- 225

Query: 277 INNNNKPVVHSQVLICGG 294
           +++ N   + ++VL+CGG
Sbjct: 226 LDDRNPDNLTAEVLVCGG 243

This family represents the N-terminus (approximately 300 residues) of a number of plant and fungal glyoxal oxidase enzymes. Glyoxal oxidase catalyzes the oxidation of aldehydes to carboxylic acids, coupled with reduction of dioxygen to hydrogen peroxide. It is an essential component of the extracellular lignin degradation pathways of the wood-rot fungus Phanerochaete chrysosporium. Length = 243
>gnl|CDD|199882 cd02851, E_set_GO_C, C-terminal Early set domain associated with the catalytic domain of galactose oxidase Back     alignment and domain information
>gnl|CDD|220118 pfam09118, DUF1929, Domain of unknown function (DUF1929) Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 526
PF07250243 Glyoxal_oxid_N: Glyoxal oxidase N-terminus; InterP 100.0
KOG4441571 consensus Proteins containing BTB/POZ and Kelch do 100.0
KOG4441571 consensus Proteins containing BTB/POZ and Kelch do 100.0
PHA02713557 hypothetical protein; Provisional 100.0
PHA02713557 hypothetical protein; Provisional 100.0
TIGR03547346 muta_rot_YjhT mutatrotase, YjhT family. Members of 99.97
PRK14131376 N-acetylneuraminic acid mutarotase; Provisional 99.96
PHA02790480 Kelch-like protein; Provisional 99.96
PLN02153341 epithiospecifier protein 99.95
PRK14131376 N-acetylneuraminic acid mutarotase; Provisional 99.95
TIGR03548323 mutarot_permut cyclically-permuted mutatrotase fam 99.94
PHA03098534 kelch-like protein; Provisional 99.94
TIGR03547346 muta_rot_YjhT mutatrotase, YjhT family. Members of 99.94
PHA02790480 Kelch-like protein; Provisional 99.94
PLN02193470 nitrile-specifier protein 99.94
PLN02153341 epithiospecifier protein 99.94
TIGR03548323 mutarot_permut cyclically-permuted mutatrotase fam 99.93
PHA03098534 kelch-like protein; Provisional 99.93
PLN02193470 nitrile-specifier protein 99.92
cd02851101 Galactose_oxidase_C_term Galactose oxidase C-termi 99.91
PF0911898 DUF1929: Domain of unknown function (DUF1929); Int 99.91
KOG4693392 consensus Uncharacterized conserved protein, conta 99.73
KOG4693392 consensus Uncharacterized conserved protein, conta 99.7
KOG0379482 consensus Kelch repeat-containing proteins [Genera 99.44
KOG0379482 consensus Kelch repeat-containing proteins [Genera 99.43
KOG4152 830 consensus Host cell transcription factor HCFC1 [Ce 99.33
KOG1230521 consensus Protein containing repeated kelch motifs 99.24
PF07250243 Glyoxal_oxid_N: Glyoxal oxidase N-terminus; InterP 99.0
COG3055381 Uncharacterized protein conserved in bacteria [Fun 98.97
COG3055381 Uncharacterized protein conserved in bacteria [Fun 98.96
KOG1230521 consensus Protein containing repeated kelch motifs 98.96
PF1396450 Kelch_6: Kelch motif 98.93
KOG4152 830 consensus Host cell transcription factor HCFC1 [Ce 98.9
PF0134447 Kelch_1: Kelch motif; InterPro: IPR006652 Kelch is 98.57
smart0061247 Kelch Kelch domain. 98.56
PF1396450 Kelch_6: Kelch motif 98.28
PF1341849 Kelch_4: Galactose oxidase, central domain; PDB: 2 98.22
PF0764649 Kelch_2: Kelch motif; InterPro: IPR011498 Kelch is 98.13
PF1341549 Kelch_3: Galactose oxidase, central domain 98.11
smart0061247 Kelch Kelch domain. 98.08
PF1341549 Kelch_3: Galactose oxidase, central domain 97.51
PF0134447 Kelch_1: Kelch motif; InterPro: IPR006652 Kelch is 97.5
PLN02772 398 guanylate kinase 97.45
PRK11138394 outer membrane biogenesis protein BamB; Provisiona 97.45
PF0764649 Kelch_2: Kelch motif; InterPro: IPR011498 Kelch is 97.12
PRK13684334 Ycf48-like protein; Provisional 97.06
PF1341849 Kelch_4: Galactose oxidase, central domain; PDB: 2 96.93
COG4257353 Vgb Streptogramin lyase [Defense mechanisms] 96.84
PRK11138394 outer membrane biogenesis protein BamB; Provisiona 96.81
PLN02772398 guanylate kinase 96.3
TIGR03866300 PQQ_ABC_repeats PQQ-dependent catabolism-associate 95.37
PF1385442 Kelch_5: Kelch motif 95.36
cd00200289 WD40 WD40 domain, found in a number of eukaryotic 94.85
KOG0310487 consensus Conserved WD40 repeat-containing protein 94.53
TIGR03866300 PQQ_ABC_repeats PQQ-dependent catabolism-associate 94.11
PF14870302 PSII_BNR: Photosynthesis system II assembly factor 94.07
TIGR01640230 F_box_assoc_1 F-box protein interaction domain. Th 94.02
PF10282345 Lactonase: Lactonase, 7-bladed beta-propeller; Int 93.99
TIGR03300377 assembly_YfgL outer membrane assembly lipoprotein 93.69
TIGR03300377 assembly_YfgL outer membrane assembly lipoprotein 93.53
KOG2437 723 consensus Muskelin [Signal transduction mechanisms 93.36
KOG0286343 consensus G-protein beta subunit [General function 92.91
PF1385442 Kelch_5: Kelch motif 92.84
PRK13684334 Ycf48-like protein; Provisional 92.48
PRK11028330 6-phosphogluconolactonase; Provisional 91.68
PF07893342 DUF1668: Protein of unknown function (DUF1668); In 91.57
COG4257353 Vgb Streptogramin lyase [Defense mechanisms] 91.0
KOG0310487 consensus Conserved WD40 repeat-containing protein 89.74
PF13360238 PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A 89.48
TIGR01640230 F_box_assoc_1 F-box protein interaction domain. Th 88.85
KOG2437723 consensus Muskelin [Signal transduction mechanisms 88.25
KOG0315311 consensus G-protein beta subunit-like protein (con 87.35
PLN00181793 protein SPA1-RELATED; Provisional 87.11
PRK11028330 6-phosphogluconolactonase; Provisional 87.05
PF08450246 SGL: SMP-30/Gluconolaconase/LRE-like region; Inter 85.98
PF07893342 DUF1668: Protein of unknown function (DUF1668); In 85.56
PF08450246 SGL: SMP-30/Gluconolaconase/LRE-like region; Inter 85.35
KOG0315311 consensus G-protein beta subunit-like protein (con 85.09
PF13360238 PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A 84.61
>PF07250 Glyoxal_oxid_N: Glyoxal oxidase N-terminus; InterPro: IPR009880 This entry represents the N terminus (approximately 300 residues) of a number of plant and fungal glyoxal oxidase enzymes Back     alignment and domain information 
Probab=100.00  E-value=3.3e-47  Score=368.18  Aligned_cols=236  Identities=51%  Similarity=0.960  Sum_probs=210.3

Q ss_pred             eEEEEecCCeEEEEecccCCCCCccCCCCccccCcc--ccCCCCcceEEEEeCCCCcEEeCccCCccccccceEcCCCcE
Q 043369           42 MHMALLPNDRIIAFDRSHFGPSNITLPQGKCIKGVE--LETSDCYAHAVEFDPITRKVRPLTIQTDTWCSSGALLANGVL  119 (526)
Q Consensus        42 ~~~a~l~~gkv~~~gg~~~~~~~~~~~~g~~~~~~~--~~~~~~~~~~~~yDp~t~~w~~~~~~~~~fc~~~~~l~~G~l  119 (526)
                      ||++|++++||+++++.+.|+|++.+++|.||....  ..++||++++.+|||.|++++++...++.||+++++|+||++
T Consensus         1 mh~~~~~~~~v~~~d~t~~g~s~~~~~~~~c~~~~~~~~~~~d~~a~s~~yD~~tn~~rpl~v~td~FCSgg~~L~dG~l   80 (243)
T PF07250_consen    1 MHMALLHNNKVIMFDRTNFGPSNISLPDGRCRDNPEDNALKFDGPAHSVEYDPNTNTFRPLTVQTDTFCSGGAFLPDGRL   80 (243)
T ss_pred             CeEeEccCCEEEEEeCCCcccccccCCCCccccCccccccccCceEEEEEEecCCCcEEeccCCCCCcccCcCCCCCCCE
Confidence            799999999999999999999999999999998765  568899999999999999999999999999999999999999


Q ss_pred             EEEcCCCCCccEEEEEcCCC---CCCcccccCCCCCcccccceeEEecCCcEEEEcCccCCeEEEEcCCCCCCCcceeec
Q 043369          120 VQTGGYRLGERVVRYLKPCS---DCDWEEDHQNGLISPRWYASNQILPNGKIIVVGGRFQFTYEFIPRTSDSDRKILYQL  196 (526)
Q Consensus       120 ~v~GG~~~g~~~v~~ydp~~---t~~W~~~~~~~m~~~R~y~s~~~L~dG~v~viGG~~~~~~E~yP~~~~~~~~~w~~~  196 (526)
                      +++||+.+|.+.++.|+|+.   +++|.+. +..|..+|||+++++|+||+|+|+||+.++++|+||+...  ......+
T Consensus        81 l~tGG~~~G~~~ir~~~p~~~~~~~~w~e~-~~~m~~~RWYpT~~~L~DG~vlIvGG~~~~t~E~~P~~~~--~~~~~~~  157 (243)
T PF07250_consen   81 LQTGGDNDGNKAIRIFTPCTSDGTCDWTES-PNDMQSGRWYPTATTLPDGRVLIVGGSNNPTYEFWPPKGP--GPGPVTL  157 (243)
T ss_pred             EEeCCCCccccceEEEecCCCCCCCCceEC-cccccCCCccccceECCCCCEEEEeCcCCCcccccCCccC--CCCceee
Confidence            99999988999999999993   3899998 4579999999999999999999999999999999976421  0133445


Q ss_pred             CCccccCCCCCCCCCCcceEEEecCCcEEEEEccceEEEeccCCeEEEeccCCCCCCCCccCCCCceeeccc--cccccc
Q 043369          197 PFLKETMHSPKIPNNLYPFLHLSTDGNLFIFANDRAILLDYVNNRVMKNYPVMPGGISRNYPSTGSSVLLPV--NLSSIN  274 (526)
Q Consensus       197 p~l~~~~~~~~~~~~~yp~~~~~~dG~Iy~~Gg~~~~~yDp~t~~w~~~~p~~p~~~~r~y~~~g~~v~lp~--~~~~~~  274 (526)
                      +++..+.+.  .+.++||++++++||+||+++++.+++||++++++.+.+|.+|.+ .|.||.+|++|||||  .+    
T Consensus       158 ~~l~~~~~~--~~~nlYP~~~llPdG~lFi~an~~s~i~d~~~n~v~~~lP~lPg~-~R~YP~sgssvmLPl~~~~----  230 (243)
T PF07250_consen  158 PFLSQTSDT--LPNNLYPFVHLLPDGNLFIFANRGSIIYDYKTNTVVRTLPDLPGG-PRNYPASGSSVMLPLTDTP----  230 (243)
T ss_pred             ecchhhhcc--CccccCceEEEcCCCCEEEEEcCCcEEEeCCCCeEEeeCCCCCCC-ceecCCCcceEEecCccCC----
Confidence            566544332  568999999999999999999999999999999987789999998 899999999999999  43    


Q ss_pred             ccccCCCCCccCcEEEEEcC
Q 043369          275 VHINNNNKPVVHSQVLICGG  294 (526)
Q Consensus       275 ~~~~~~~~~~~~gkI~v~GG  294 (526)
                             .+++..+|+||||
T Consensus       231 -------~~~~~~evlvCGG  243 (243)
T PF07250_consen  231 -------PNNYTAEVLVCGG  243 (243)
T ss_pred             -------CCCCCeEEEEeCC
Confidence                   5668999999998

Glyoxal oxidase catalyses the oxidation of aldehydes to carboxylic acids, coupled with reduction of dioxygen to hydrogen peroxide. It is an essential component of the extracellular lignin degradation pathways of the wood-rot fungus Phanerochaete chrysosporium [].
>KOG4441 consensus Proteins containing BTB/POZ and Kelch domains, involved in regulatory/signal transduction processes [Signal transduction mechanisms; General function prediction only] Back     alignment and domain information
>KOG4441 consensus Proteins containing BTB/POZ and Kelch domains, involved in regulatory/signal transduction processes [Signal transduction mechanisms; General function prediction only] Back     alignment and domain information
>PHA02713 hypothetical protein; Provisional Back     alignment and domain information
>PHA02713 hypothetical protein; Provisional Back     alignment and domain information
>TIGR03547 muta_rot_YjhT mutatrotase, YjhT family Back     alignment and domain information
>PRK14131 N-acetylneuraminic acid mutarotase; Provisional Back     alignment and domain information
>PHA02790 Kelch-like protein; Provisional Back     alignment and domain information
>PLN02153 epithiospecifier protein Back     alignment and domain information
>PRK14131 N-acetylneuraminic acid mutarotase; Provisional Back     alignment and domain information
>TIGR03548 mutarot_permut cyclically-permuted mutatrotase family protein Back     alignment and domain information
>PHA03098 kelch-like protein; Provisional Back     alignment and domain information
>TIGR03547 muta_rot_YjhT mutatrotase, YjhT family Back     alignment and domain information
>PHA02790 Kelch-like protein; Provisional Back     alignment and domain information
>PLN02193 nitrile-specifier protein Back     alignment and domain information
>PLN02153 epithiospecifier protein Back     alignment and domain information
>TIGR03548 mutarot_permut cyclically-permuted mutatrotase family protein Back     alignment and domain information
>PHA03098 kelch-like protein; Provisional Back     alignment and domain information
>PLN02193 nitrile-specifier protein Back     alignment and domain information
>cd02851 Galactose_oxidase_C_term Galactose oxidase C-terminus domain Back     alignment and domain information
>PF09118 DUF1929: Domain of unknown function (DUF1929); InterPro: IPR015202 This domain adopts a secondary structure consisting of a bundle of seven, mostly antiparallel, beta-strands surrounding a hydrophobic core Back     alignment and domain information
>KOG4693 consensus Uncharacterized conserved protein, contains kelch repeat [General function prediction only] Back     alignment and domain information
>KOG4693 consensus Uncharacterized conserved protein, contains kelch repeat [General function prediction only] Back     alignment and domain information
>KOG0379 consensus Kelch repeat-containing proteins [General function prediction only] Back     alignment and domain information
>KOG0379 consensus Kelch repeat-containing proteins [General function prediction only] Back     alignment and domain information
>KOG4152 consensus Host cell transcription factor HCFC1 [Cell cycle control, cell division, chromosome partitioning; Transcription] Back     alignment and domain information
>KOG1230 consensus Protein containing repeated kelch motifs [General function prediction only] Back     alignment and domain information
>PF07250 Glyoxal_oxid_N: Glyoxal oxidase N-terminus; InterPro: IPR009880 This entry represents the N terminus (approximately 300 residues) of a number of plant and fungal glyoxal oxidase enzymes Back     alignment and domain information
>COG3055 Uncharacterized protein conserved in bacteria [Function unknown] Back     alignment and domain information
>COG3055 Uncharacterized protein conserved in bacteria [Function unknown] Back     alignment and domain information
>KOG1230 consensus Protein containing repeated kelch motifs [General function prediction only] Back     alignment and domain information
>PF13964 Kelch_6: Kelch motif Back     alignment and domain information
>KOG4152 consensus Host cell transcription factor HCFC1 [Cell cycle control, cell division, chromosome partitioning; Transcription] Back     alignment and domain information
>PF01344 Kelch_1: Kelch motif; InterPro: IPR006652 Kelch is a 50-residue motif, named after the Drosophila mutant in which it was first identified [] Back     alignment and domain information
>smart00612 Kelch Kelch domain Back     alignment and domain information
>PF13964 Kelch_6: Kelch motif Back     alignment and domain information
>PF13418 Kelch_4: Galactose oxidase, central domain; PDB: 2UVK_B Back     alignment and domain information
>PF07646 Kelch_2: Kelch motif; InterPro: IPR011498 Kelch is a 50-residue motif, named after the Drosophila mutant in which it was first identified [] Back     alignment and domain information
>PF13415 Kelch_3: Galactose oxidase, central domain Back     alignment and domain information
>smart00612 Kelch Kelch domain Back     alignment and domain information
>PF13415 Kelch_3: Galactose oxidase, central domain Back     alignment and domain information
>PF01344 Kelch_1: Kelch motif; InterPro: IPR006652 Kelch is a 50-residue motif, named after the Drosophila mutant in which it was first identified [] Back     alignment and domain information
>PLN02772 guanylate kinase Back     alignment and domain information
>PRK11138 outer membrane biogenesis protein BamB; Provisional Back     alignment and domain information
>PF07646 Kelch_2: Kelch motif; InterPro: IPR011498 Kelch is a 50-residue motif, named after the Drosophila mutant in which it was first identified [] Back     alignment and domain information
>PRK13684 Ycf48-like protein; Provisional Back     alignment and domain information
>PF13418 Kelch_4: Galactose oxidase, central domain; PDB: 2UVK_B Back     alignment and domain information
>COG4257 Vgb Streptogramin lyase [Defense mechanisms] Back     alignment and domain information
>PRK11138 outer membrane biogenesis protein BamB; Provisional Back     alignment and domain information
>PLN02772 guanylate kinase Back     alignment and domain information
>TIGR03866 PQQ_ABC_repeats PQQ-dependent catabolism-associated beta-propeller protein Back     alignment and domain information
>PF13854 Kelch_5: Kelch motif Back     alignment and domain information
>cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto Back     alignment and domain information
>KOG0310 consensus Conserved WD40 repeat-containing protein [Function unknown] Back     alignment and domain information
>TIGR03866 PQQ_ABC_repeats PQQ-dependent catabolism-associated beta-propeller protein Back     alignment and domain information
>PF14870 PSII_BNR: Photosynthesis system II assembly factor YCF48; PDB: 2XBG_A Back     alignment and domain information
>TIGR01640 F_box_assoc_1 F-box protein interaction domain Back     alignment and domain information
>PF10282 Lactonase: Lactonase, 7-bladed beta-propeller; InterPro: IPR019405 6-phosphogluconolactonases (6PGL) 3 Back     alignment and domain information
>TIGR03300 assembly_YfgL outer membrane assembly lipoprotein YfgL Back     alignment and domain information
>TIGR03300 assembly_YfgL outer membrane assembly lipoprotein YfgL Back     alignment and domain information
>KOG2437 consensus Muskelin [Signal transduction mechanisms] Back     alignment and domain information
>KOG0286 consensus G-protein beta subunit [General function prediction only] Back     alignment and domain information
>PF13854 Kelch_5: Kelch motif Back     alignment and domain information
>PRK13684 Ycf48-like protein; Provisional Back     alignment and domain information
>PRK11028 6-phosphogluconolactonase; Provisional Back     alignment and domain information
>PF07893 DUF1668: Protein of unknown function (DUF1668); InterPro: IPR012871 The hypothetical proteins found in this family are expressed by Oryza sativa (Rice) and are of unknown function Back     alignment and domain information
>COG4257 Vgb Streptogramin lyase [Defense mechanisms] Back     alignment and domain information
>KOG0310 consensus Conserved WD40 repeat-containing protein [Function unknown] Back     alignment and domain information
>PF13360 PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A 3Q54_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A Back     alignment and domain information
>TIGR01640 F_box_assoc_1 F-box protein interaction domain Back     alignment and domain information
>KOG2437 consensus Muskelin [Signal transduction mechanisms] Back     alignment and domain information
>KOG0315 consensus G-protein beta subunit-like protein (contains WD40 repeats) [General function prediction only] Back     alignment and domain information
>PLN00181 protein SPA1-RELATED; Provisional Back     alignment and domain information
>PRK11028 6-phosphogluconolactonase; Provisional Back     alignment and domain information
>PF08450 SGL: SMP-30/Gluconolaconase/LRE-like region; InterPro: IPR013658 This family describes a region that is found in proteins expressed by a variety of eukaryotic and prokaryotic species Back     alignment and domain information
>PF07893 DUF1668: Protein of unknown function (DUF1668); InterPro: IPR012871 The hypothetical proteins found in this family are expressed by Oryza sativa (Rice) and are of unknown function Back     alignment and domain information
>PF08450 SGL: SMP-30/Gluconolaconase/LRE-like region; InterPro: IPR013658 This family describes a region that is found in proteins expressed by a variety of eukaryotic and prokaryotic species Back     alignment and domain information
>KOG0315 consensus G-protein beta subunit-like protein (contains WD40 repeats) [General function prediction only] Back     alignment and domain information
>PF13360 PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A 3Q54_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query526
2eic_A639 Crystal Structure Of Galactose Oxidase Mutant W290f 8e-07
1t2x_A639 Glactose Oxidase C383s Mutant Identified By Directe 9e-07
2wq8_A661 Glycan Labelling Using Engineered Variants Of Galac 1e-06
2eie_A639 Crystal Structure Of Galactose Oxidase Complexed Wi 3e-06
2eib_A639 Crystal Structure Of Galactose Oxidase, W290h Mutan 6e-06
2eid_A639 Galactose Oxidase W290g Mutant Length = 639 9e-06
1k3i_A656 Crystal Structure Of The Precursor Of Galactose Oxi 2e-05
>pdb|2EIC|A Chain A, Crystal Structure Of Galactose Oxidase Mutant W290f Length = 639 Back     alignment and structure 
Iteration: 1

 Score = 52.0 bits (123), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 104/457 (22%), Positives = 169/457 (36%), Gaps = 55/457 (12%)
Query: 89  EFDPITRKVRPLTI---QTDTWCSSGALLANGVLVQTGGYRLGERVVRYLKPCSDCDW-- 143
            +DP T  V   T+   + D +C   ++  NG +V TGG    +     L   S   W  
Sbjct: 206 SWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGG---NDAKKTSLYDSSSDSWIP 262
Query: 144 EEDHQNGLISPRWYASNQILPNGKIIVVGGRFQF-TYEFIPRTSDSDRKILYQLPFLKET 202
             D Q      R Y S+  + +G++  +GG F    +E          K    LP  K  
Sbjct: 263 GPDMQ----VARGYQSSATMSDGRVFTIGGSFSGGVFEKNGEVYSPSSKTWTSLPNAKVN 318
Query: 203 MHSPKIPNNLYPFLHLSTDGNLFIFANDRAILLDYVNNRVMKNYPVMPGGISRNYPSTGS 262
                    LY      +D + ++F   +  +     +  M  Y     G  ++     S
Sbjct: 319 PMLTADKQGLY-----RSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQS 373
Query: 263 SVLLPVNLSSINVHINNNNKPVVHSQVLICGGTLPDSNENAAEAQIFLPAAKSCGRLTIT 322
           +  +  +    N  + +     V  ++L  GG+ PD  ++ A     +      G    T
Sbjct: 374 NRGVAPDAMCGNAVMYD----AVKGKILTFGGS-PDYQDSDATTNAHIITLGEPG----T 424
Query: 323 AQNPKWEMEEMPLNRVMGDMILLPTGDVLIINXXXXXXXXXXXXREPVLNPVIYCPKINR 382
           + N  +    +   R     ++LP G   I                PV  P IY P+ + 
Sbjct: 425 SPNTVFASNGLYFARTFHTSVVLPDGSTFITGGQRRGIPFEDST--PVFTPEIYVPEQDT 482
Query: 383 FRILSPSLIPRLYHSTAHLLSDGRVLVGGSN--PNVNYNFSALFPTELSLQAFYPPY-FN 439
           F   +P+ I R+YHS + LL DGRV  GG     +   N           Q F P Y +N
Sbjct: 483 FYKQNPNSIVRVYHSISLLLPDGRVFNGGGGLCGDCTTN-------HFDAQIFTPNYLYN 535
Query: 440 LMSN-RSRPSIS-----TVKPGAFLKLKYTENFLLGFKLRSG--------DLGEIFVTMV 485
              N  +RP I+     +VK G  + +    +      +R G        D   I +T+ 
Sbjct: 536 SNGNLATRPKITRTSTQSVKVGGRITISTDSSISKASLIRYGTATHTVNTDQRRIPLTLT 595
Query: 486 APSFTTHSFAM-NQRLLVLELHGALFLVND-GVPSKA 520
                ++SF + +   + L  +  LF++N  GVPS A
Sbjct: 596 NNGGNSYSFQVPSDSGVALPGYWMLFVMNSAGVPSVA 632
>pdb|1T2X|A Chain A, Glactose Oxidase C383s Mutant Identified By Directed Evolution Length = 639 Back     alignment and structure
>pdb|2WQ8|A Chain A, Glycan Labelling Using Engineered Variants Of Galactose Oxidase Obtained By Directed Evolution Length = 661 Back     alignment and structure
>pdb|2EIE|A Chain A, Crystal Structure Of Galactose Oxidase Complexed With Azide Length = 639 Back     alignment and structure
>pdb|2EIB|A Chain A, Crystal Structure Of Galactose Oxidase, W290h Mutant Length = 639 Back     alignment and structure
>pdb|2EID|A Chain A, Galactose Oxidase W290g Mutant Length = 639 Back     alignment and structure
>pdb|1K3I|A Chain A, Crystal Structure Of The Precursor Of Galactose Oxidase Length = 656 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query526
1k3i_A656 Galactose oxidase precursor; blade beta propeller, 2e-77
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 5e-04
2zwa_A695 Leucine carboxyl methyltransferase 2; HET: SAH CIT 9e-04
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A Length = 656 Back     alignment and structure
 Score =  255 bits (652), Expect = 2e-77
 Identities = 93/473 (19%), Positives = 159/473 (33%), Gaps = 68/473 (14%)

Query: 83  CYAHAVEFDPITRKVRPLTIQTDTWCSSGALLANGVLVQTGGYRLGERVVRYLKPCSDCD 142
             +       I         + D +C   ++  NG +V TGG     +        S   
Sbjct: 220 LTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGN--DAKKTSLYDSSS-DS 276

Query: 143 WEEDHQNGLISPRWYASNQILPNGKIIVVGGR-----FQFTYEFIPRTSDSDRKILYQLP 197
           W       +   R Y S+  + +G++  +GG      F+   E    +S +       LP
Sbjct: 277 WIPG--PDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWT----SLP 330

Query: 198 FLKETMHSPKIPNNLYPFLHLSTDGNLFIFANDRAILLDYVNNRVMKNYPVMPGGISRNY 257
             K           LY      +D + ++F   +  +     +  M  Y     G  ++ 
Sbjct: 331 NAKVNPMLTADKQGLYR-----SDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSA 385

Query: 258 PSTGSSVLLPVNLSSINVHINNNNKPVVHSQVLICGGTLPDSNENAAEAQIFLPAAKSCG 317
               S+  +  +     +  N      V  ++L  GG+ PD  ++ A     +      G
Sbjct: 386 GKRQSNRGVAPDA----MCGNAVMYDAVKGKILTFGGS-PDYQDSDATTNAHIITLGEPG 440

Query: 318 RLTITAQNPKWEMEEMPLNRVMGDMILLPTGDVLIINGAAKGTAGWGAAREPVLNPVIYC 377
               T+ N  +    +   R     ++LP G   I  G  +G         PV  P IY 
Sbjct: 441 ----TSPNTVFASNGLYFARTFHTSVVLPDGSTFITGGQRRGIPFED--STPVFTPEIYV 494

Query: 378 PKINRFRILSPSLIPRLYHSTAHLLSDGRVLVGGSNPNVNYNFSALFPTELSLQAFYPPY 437
           P+ + F   +P+ I R+YHS + LL DGRV  GG     +             Q F P Y
Sbjct: 495 PEQDTFYKQNPNSIVRVYHSISLLLPDGRVFNGGGGLCGDC-----TTNHFDAQIFTPNY 549

Query: 438 FN--LMSNRSRPSISTVKPGAFLKLKYTENFLLGFKLRSGDLGEIFVTMVAPSFTTHSFA 495
                 +  +RP I+     +   +K      +       D      +++     TH+  
Sbjct: 550 LYNSNGNLATRPKITRTSTQS---VKVGGRITIST-----DSSISKASLIRYGTATHTVN 601

Query: 496 MNQRLLVLELHGA----------------------LFLVND-GVPSKAVWVQM 525
            +QR + L L                         LF++N  GVPS A  +++
Sbjct: 602 TDQRRIPLTLTNNGGNSYSFQVPSDSGVALPGYWMLFVMNSAGVPSVASTIRV 654
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A* Length = 695 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query526
1k3i_A656 Galactose oxidase precursor; blade beta propeller, 100.0
2xn4_A302 Kelch-like protein 2; structural protein, cytoskel 100.0
1zgk_A308 Kelch-like ECH-associated protein 1; beta-propelle 100.0
3ii7_A306 Kelch-like protein 7; protein-binding, kelch-repea 100.0
2vpj_A301 Kelch-like protein 12; adaptor protein, WNT signal 100.0
1zgk_A308 Kelch-like ECH-associated protein 1; beta-propelle 100.0
2xn4_A302 Kelch-like protein 2; structural protein, cytoskel 100.0
2woz_A318 Kelch repeat and BTB domain-containing protein 10; 100.0
4asc_A315 Kelch repeat and BTB domain-containing protein 5; 100.0
3ii7_A306 Kelch-like protein 7; protein-binding, kelch-repea 100.0
2vpj_A301 Kelch-like protein 12; adaptor protein, WNT signal 99.97
2uvk_A357 YJHT; unknown function, hypothetical protein, sial 99.97
4asc_A315 Kelch repeat and BTB domain-containing protein 5; 99.96
2woz_A318 Kelch repeat and BTB domain-containing protein 10; 99.96
1k3i_A656 Galactose oxidase precursor; blade beta propeller, 99.96
2uvk_A357 YJHT; unknown function, hypothetical protein, sial 99.96
2zwa_A695 Leucine carboxyl methyltransferase 2; HET: SAH CIT 99.93
2zwa_A695 Leucine carboxyl methyltransferase 2; HET: SAH CIT 99.91
3vgz_A353 Uncharacterized protein YNCE; beta-propeller, prot 98.23
4ery_A312 WD repeat-containing protein 5; WD40, WIN motif, b 97.9
3dsm_A328 Uncharacterized protein bacuni_02894; seven_blated 97.84
3no2_A276 Uncharacterized protein; six-bladed beta-propeller 97.74
3no2_A276 Uncharacterized protein; six-bladed beta-propeller 97.69
1k8k_C372 P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta- 97.68
1got_B340 GT-beta; complex (GTP-binding/transducer), G prote 97.66
1gxr_A337 ESG1, transducin-like enhancer protein 1; transcri 97.64
3ow8_A321 WD repeat-containing protein 61; structural genomi 97.63
2z2n_A299 Virginiamycin B lyase; seven-bladed beta-propeller 97.45
2pbi_B354 Guanine nucleotide-binding protein subunit beta 5; 97.45
2qc5_A300 Streptogramin B lactonase; beta propeller, lyase; 97.44
3zwl_B369 Eukaryotic translation initiation factor 3 subuni; 97.44
1gxr_A337 ESG1, transducin-like enhancer protein 1; transcri 97.42
1l0q_A391 Surface layer protein; SLP, S-layer, 7-bladed beta 97.42
3vl1_A420 26S proteasome regulatory subunit RPN14; beta-prop 97.4
3bws_A433 Protein LP49; two-domain, immunoglobulin-like, 7-b 97.38
4aez_A401 CDC20, WD repeat-containing protein SLP1; cell cyc 97.37
3vl1_A420 26S proteasome regulatory subunit RPN14; beta-prop 97.37
1vyh_C410 Platelet-activating factor acetylhydrolase IB alph 97.32
2ynn_A304 Coatomer subunit beta'; protein transport, peptide 97.31
3u4y_A331 Uncharacterized protein; structural genomics, PSI- 97.28
3hfq_A347 Uncharacterized protein LP_2219; Q88V64_lacpl, NES 97.27
3q7m_A376 Lipoprotein YFGL, BAMB; beta-propeller, BAM comple 97.27
3ei3_B383 DNA damage-binding protein 2; UV-damage, DDB, nucl 97.23
1rwi_B270 Serine/threonine-protein kinase PKND; beta propell 97.22
1erj_A393 Transcriptional repressor TUP1; beta-propeller, tr 97.16
3iz6_a380 40S ribosomal protein RACK1 (RACK1); eukaryotic ri 97.13
4e54_B435 DNA damage-binding protein 2; beta barrel, double 97.12
3dsm_A328 Uncharacterized protein bacuni_02894; seven_blated 97.12
3fm0_A345 Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD r 97.07
3ow8_A321 WD repeat-containing protein 61; structural genomi 97.05
3scy_A361 Hypothetical bacterial 6-phosphogluconolactonase; 97.01
1rwi_B270 Serine/threonine-protein kinase PKND; beta propell 97.0
2aq5_A402 Coronin-1A; WD40 repeat, 7-bladed beta-propeller, 96.96
2ymu_A577 WD-40 repeat protein; unknown function, two domain 96.95
4ery_A312 WD repeat-containing protein 5; WD40, WIN motif, b 96.94
2ovr_B445 FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 96.93
1r5m_A425 SIR4-interacting protein SIF2; transcription corep 96.91
3jrp_A379 Fusion protein of protein transport protein SEC13 96.88
1l0q_A391 Surface layer protein; SLP, S-layer, 7-bladed beta 96.87
3hfq_A347 Uncharacterized protein LP_2219; Q88V64_lacpl, NES 96.83
3sfz_A 1249 APAF-1, apoptotic peptidase activating factor 1; a 96.77
3dwl_C377 Actin-related protein 2/3 complex subunit 1; prope 96.74
3iz6_a380 40S ribosomal protein RACK1 (RACK1); eukaryotic ri 96.74
1got_B340 GT-beta; complex (GTP-binding/transducer), G prote 96.72
2pm7_B297 Protein transport protein SEC13, protein transport 96.71
2ynn_A304 Coatomer subunit beta'; protein transport, peptide 96.7
2hes_X330 YDR267CP; beta-propeller, WD40 repeat, biosyntheti 96.7
2pbi_B354 Guanine nucleotide-binding protein subunit beta 5; 96.69
3jrp_A379 Fusion protein of protein transport protein SEC13 96.69
1ri6_A343 Putative isomerase YBHE; 7-bladed propeller, enzym 96.69
3sfz_A1249 APAF-1, apoptotic peptidase activating factor 1; a 96.69
3mkq_A 814 Coatomer beta'-subunit; beta-propeller, alpha-sole 96.65
1nr0_A611 Actin interacting protein 1; beta propeller, WD40 96.64
2pm9_A416 Protein WEB1, protein transport protein SEC31; bet 96.64
1q7f_A286 NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL 96.62
2ymu_A577 WD-40 repeat protein; unknown function, two domain 96.58
3odt_A313 Protein DOA1; ubiquitin, nuclear protein; HET: MSE 96.56
1p22_A435 F-BOX/WD-repeat protein 1A; ubiquitination, degrad 96.56
4gga_A420 P55CDC, cell division cycle protein 20 homolog; ce 96.55
2z2n_A299 Virginiamycin B lyase; seven-bladed beta-propeller 96.53
3u4y_A331 Uncharacterized protein; structural genomics, PSI- 96.51
3i2n_A357 WD repeat-containing protein 92; WD40 repeats, str 96.47
1q7f_A286 NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL 96.46
1pgu_A 615 Actin interacting protein 1; WD repeat, seven-blad 96.43
3v7d_B464 Cell division control protein 4; WD 40 domain, pho 96.37
3dwl_C377 Actin-related protein 2/3 complex subunit 1; prope 96.35
3bws_A433 Protein LP49; two-domain, immunoglobulin-like, 7-b 96.35
1r5m_A425 SIR4-interacting protein SIF2; transcription corep 96.34
1ri6_A343 Putative isomerase YBHE; 7-bladed propeller, enzym 96.34
3scy_A361 Hypothetical bacterial 6-phosphogluconolactonase; 96.33
3vgz_A353 Uncharacterized protein YNCE; beta-propeller, prot 96.3
3jro_A 753 Fusion protein of protein transport protein SEC13 96.24
2ovr_B445 FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 96.2
4h5i_A365 Guanine nucleotide-exchange factor SEC12; copii ve 96.17
2ojh_A297 Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 96.14
3dm0_A694 Maltose-binding periplasmic protein fused with RAC 96.11
4aez_A401 CDC20, WD repeat-containing protein SLP1; cell cyc 96.07
1nir_A543 Nitrite reductase; hemoprotein, denitrification, d 96.07
3fm0_A345 Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD r 96.0
3mmy_A368 MRNA export factor; mRNA export, nuclear protein; 96.0
4aow_A340 Guanine nucleotide-binding protein subunit beta-2; 95.98
1erj_A393 Transcriptional repressor TUP1; beta-propeller, tr 95.91
3jro_A 753 Fusion protein of protein transport protein SEC13 95.91
3fvz_A329 Peptidyl-glycine alpha-amidating monooxygenase; be 95.88
3v7d_B464 Cell division control protein 4; WD 40 domain, pho 95.85
3q7m_A376 Lipoprotein YFGL, BAMB; beta-propeller, BAM comple 95.84
2pm9_A416 Protein WEB1, protein transport protein SEC31; bet 95.73
1vyh_C410 Platelet-activating factor acetylhydrolase IB alph 95.73
1nr0_A 611 Actin interacting protein 1; beta propeller, WD40 95.72
4ggc_A318 P55CDC, cell division cycle protein 20 homolog; ce 95.71
3frx_A319 Guanine nucleotide-binding protein subunit beta- l 95.65
2xzm_R343 RACK1; ribosome, translation; 3.93A {Tetrahymena t 95.61
4e54_B435 DNA damage-binding protein 2; beta barrel, double 95.61
1k8k_C372 P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta- 95.6
3bg1_A316 Protein SEC13 homolog; NPC, transport, WD repeat, 95.56
3k26_A366 Polycomb protein EED; WD40, structural genomics, N 95.54
4a11_B408 DNA excision repair protein ERCC-8; DNA binding pr 95.53
1sq9_A397 Antiviral protein SKI8; WD repeat, beta-transducin 95.51
2pm7_B297 Protein transport protein SEC13, protein transport 95.37
3mkq_A 814 Coatomer beta'-subunit; beta-propeller, alpha-sole 95.23
3ei3_B383 DNA damage-binding protein 2; UV-damage, DDB, nucl 95.19
4g56_B357 MGC81050 protein; protein arginine methyltransfera 94.9
2iwa_A266 Glutamine cyclotransferase; pyroglutamate, acyltra 94.84
1sq9_A397 Antiviral protein SKI8; WD repeat, beta-transducin 94.8
1yfq_A342 Cell cycle arrest protein BUB3; WD repeat WD40 rep 94.77
3lrv_A343 PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiqu 94.7
1nir_A543 Nitrite reductase; hemoprotein, denitrification, d 94.68
4g56_B357 MGC81050 protein; protein arginine methyltransfera 94.67
3bg1_A316 Protein SEC13 homolog; NPC, transport, WD repeat, 94.49
3dm0_A694 Maltose-binding periplasmic protein fused with RAC 94.46
3nok_A268 Glutaminyl cyclase; beta-propeller, cyclotransfera 94.44
3nol_A262 Glutamine cyclotransferase; beta-propeller, glutam 94.37
1yfq_A342 Cell cycle arrest protein BUB3; WD repeat WD40 rep 94.3
3frx_A319 Guanine nucleotide-binding protein subunit beta- l 94.17
4gqb_B344 Methylosome protein 50; TIM barrel, beta-propeller 94.15
4d9s_A406 UVB-resistance protein UVR8; UV resistance, UV-B p 94.06
4aow_A340 Guanine nucleotide-binding protein subunit beta-2; 93.93
3odt_A313 Protein DOA1; ubiquitin, nuclear protein; HET: MSE 93.91
3i2n_A357 WD repeat-containing protein 92; WD40 repeats, str 93.91
4gqb_B344 Methylosome protein 50; TIM barrel, beta-propeller 93.87
2ecf_A 741 Dipeptidyl peptidase IV; prolyl oligopeptidase fam 93.74
3fvz_A329 Peptidyl-glycine alpha-amidating monooxygenase; be 93.72
1pgu_A 615 Actin interacting protein 1; WD repeat, seven-blad 93.71
1p22_A435 F-BOX/WD-repeat protein 1A; ubiquitination, degrad 93.71
2dg1_A333 DRP35, lactonase; beta propeller, hydrolase; 1.72A 93.7
2xbg_A327 YCF48-like protein; photosynthesis, photosystem II 93.67
3f3f_A351 Nucleoporin SEH1; structural protein, protein comp 93.57
3mbr_X243 Glutamine cyclotransferase; beta-propeller; 1.44A 93.48
4h5i_A365 Guanine nucleotide-exchange factor SEC12; copii ve 93.4
1pjx_A314 Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotries 93.33
2dg1_A333 DRP35, lactonase; beta propeller, hydrolase; 1.72A 93.24
4gga_A420 P55CDC, cell division cycle protein 20 homolog; ce 93.23
4a11_B408 DNA excision repair protein ERCC-8; DNA binding pr 93.12
1pby_B337 Quinohemoprotein amine dehydrogenase 40 kDa subuni 93.09
3hrp_A409 Uncharacterized protein; NP_812590.1, structural g 92.93
1jmx_B349 Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 92.62
3nol_A262 Glutamine cyclotransferase; beta-propeller, glutam 92.45
3zwl_B369 Eukaryotic translation initiation factor 3 subuni; 91.85
3lrv_A343 PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiqu 91.73
3gre_A437 Serine/threonine-protein kinase VPS15; seven-blade 91.72
3e5z_A296 Putative gluconolactonase; X-RAY NESG Q9RXN3 gluco 91.48
3v9f_A781 Two-component system sensor histidine kinase/RESP 91.48
3k26_A366 Polycomb protein EED; WD40, structural genomics, N 91.46
2hqs_A415 Protein TOLB; TOLB, PAL, TOL, transport protein-li 91.28
2hqs_A415 Protein TOLB; TOLB, PAL, TOL, transport protein-li 91.13
3e5z_A296 Putative gluconolactonase; X-RAY NESG Q9RXN3 gluco 91.06
2bkl_A695 Prolyl endopeptidase; mechanistic study, celiac sp 91.05
2xbg_A327 YCF48-like protein; photosynthesis, photosystem II 90.82
3dw8_B447 Serine/threonine-protein phosphatase 2A 55 kDa RE 90.46
3mmy_A368 MRNA export factor; mRNA export, nuclear protein; 90.07
2qc5_A300 Streptogramin B lactonase; beta propeller, lyase; 90.03
3f3f_A351 Nucleoporin SEH1; structural protein, protein comp 89.91
2vdu_B450 TRNA (guanine-N(7)-)-methyltransferase- associated 89.86
2aq5_A402 Coronin-1A; WD40 repeat, 7-bladed beta-propeller, 89.6
2iwa_A266 Glutamine cyclotransferase; pyroglutamate, acyltra 89.5
3o4h_A 582 Acylamino-acid-releasing enzyme; alpha/beta hydrol 89.33
2ecf_A 741 Dipeptidyl peptidase IV; prolyl oligopeptidase fam 88.57
4a2l_A795 BT_4663, two-component system sensor histidine kin 88.12
3mbr_X243 Glutamine cyclotransferase; beta-propeller; 1.44A 87.67
1pby_B337 Quinohemoprotein amine dehydrogenase 40 kDa subuni 86.87
2vdu_B450 TRNA (guanine-N(7)-)-methyltransferase- associated 85.85
3g4e_A297 Regucalcin; six bladed beta-propeller, gluconolcat 85.3
1qks_A567 Cytochrome CD1 nitrite reductase; enzyme, oxidored 84.65
2hes_X330 YDR267CP; beta-propeller, WD40 repeat, biosyntheti 84.49
2xzm_R343 RACK1; ribosome, translation; 3.93A {Tetrahymena t 84.06
3sjl_D386 Methylamine dehydrogenase heavy chain; MAUG, C-hem 83.43
3nok_A268 Glutaminyl cyclase; beta-propeller, cyclotransfera 82.58
2ojh_A297 Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 82.46
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A Back     alignment and structure
Probab=100.00  E-value=1.3e-67  Score=589.06  Aligned_cols=431  Identities=21%  Similarity=0.312  Sum_probs=331.5

Q ss_pred             CCCCCcEEEcccCCccceeEEEEec-CCeEEEEecccCCCCCccCCCCccccCccccCCCCcceEEEEeCCCCcEEeCcc
Q 043369           24 QDLEGKWKLLKRSIGVSAMHMALLP-NDRIIAFDRSHFGPSNITLPQGKCIKGVELETSDCYAHAVEFDPITRKVRPLTI  102 (526)
Q Consensus        24 ~~~~g~W~~~~~~~~v~~~~~a~l~-~gkv~~~gg~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~yDp~t~~w~~~~~  102 (526)
                      +...++|+.+.+++. .+.|+++++ +||||++||....  .+.   +.         ......+.+|||.+++|++++.
T Consensus       172 dp~~~~W~~~~~~P~-~~~~~av~~~~g~l~v~GG~~~~--~~~---~~---------~~~~~~~~~yd~~t~~w~~~~~  236 (656)
T 1k3i_A          172 QPGLGRWGPTIDLPI-VPAAAAIEPTSGRVLMWSSYRND--AFG---GS---------PGGITLTSSWDPSTGIVSDRTV  236 (656)
T ss_dssp             CTTSCEEEEEEECSS-CCSEEEEETTTTEEEEEEECCCT--TTC---SC---------CCSEEEEEEECTTTCCBCCCEE
T ss_pred             CCCCCeeeeeccCCC-CceeEEEEecCCEEEEEeccccc--ccc---cC---------CCCeEEEEEEeCCCCcEEeCcc
Confidence            445799999877654 667888888 9999999997531  110   00         0012468899999999998875


Q ss_pred             C---CccccccceEcCCCcEEEEcCCCCCccEEEEEcCCCCCCcccccCCCCCcccccceeEEecCCcEEEEcCccC---
Q 043369          103 Q---TDTWCSSGALLANGVLVQTGGYRLGERVVRYLKPCSDCDWEEDHQNGLISPRWYASNQILPNGKIIVVGGRFQ---  176 (526)
Q Consensus       103 ~---~~~fc~~~~~l~~G~l~v~GG~~~g~~~v~~ydp~~t~~W~~~~~~~m~~~R~y~s~~~L~dG~v~viGG~~~---  176 (526)
                      +   +..||++.+++.||+||++||...  ..+++|||+ +++|++.  .+|+.+||++++++++||+|||+||...   
T Consensus       237 ~~~~~~~~~~~~~~~~~g~lyv~GG~~~--~~v~~yd~~-t~~W~~~--~~~~~~R~~~s~~~~~dg~iyv~GG~~~~~~  311 (656)
T 1k3i_A          237 TVTKHDMFCPGISMDGNGQIVVTGGNDA--KKTSLYDSS-SDSWIPG--PDMQVARGYQSSATMSDGRVFTIGGSWSGGV  311 (656)
T ss_dssp             EECSCCCSSCEEEECTTSCEEEECSSST--TCEEEEEGG-GTEEEEC--CCCSSCCSSCEEEECTTSCEEEECCCCCSSS
T ss_pred             cCCCCCCccccccCCCCCCEEEeCCCCC--CceEEecCc-CCceeEC--CCCCccccccceEEecCCeEEEEeCcccCCc
Confidence            4   567898888899999999999753  379999999 9999999  6899999999999998999999999532   


Q ss_pred             --CeEEEE-cCCCCCCCcceeecCCccccCCCCCCCCCCcceEEEecCCcEEEEEcc-----------ceEEEeccCCeE
Q 043369          177 --FTYEFI-PRTSDSDRKILYQLPFLKETMHSPKIPNNLYPFLHLSTDGNLFIFAND-----------RAILLDYVNNRV  242 (526)
Q Consensus       177 --~~~E~y-P~~~~~~~~~w~~~p~l~~~~~~~~~~~~~yp~~~~~~dG~Iy~~Gg~-----------~~~~yDp~t~~w  242 (526)
                        .++|+| |.++     +|..++..... .   ...... ......+++||++||.           ..++||+.+++|
T Consensus       312 ~~~~~e~yd~~t~-----~W~~~~~~~~~-p---~~~~~~-~~~~~~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w  381 (656)
T 1k3i_A          312 FEKNGEVYSPSSK-----TWTSLPNAKVN-P---MLTADK-QGLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGD  381 (656)
T ss_dssp             CCCCEEEEETTTT-----EEEEETTSCSG-G---GCCCCT-TGGGTTTCSCCEEECGGGCEEECCSSSEEEEEECSTTCE
T ss_pred             ccccceEeCCCCC-----cceeCCCcccc-c---cccccc-cceeecCCceEEEECCCCcEEEecCccceeeeecCCcce
Confidence              468999 8887     78765311000 0   000001 1233468899999863           358999999999


Q ss_pred             EEeccCCCCCC-CCccCCCCceeecccccccccccccCCCCCccCcEEEEEcCCCCCCCchhhhhhccccccc---ceEE
Q 043369          243 MKNYPVMPGGI-SRNYPSTGSSVLLPVNLSSINVHINNNNKPVVHSQVLICGGTLPDSNENAAEAQIFLPAAK---SCGR  318 (526)
Q Consensus       243 ~~~~p~~p~~~-~r~y~~~g~~v~lp~~~~~~~~~~~~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~~~~a~~---s~~~  318 (526)
                      +......+... ....+..+++++++.                .+++||++||...  +..       ..+++   .+++
T Consensus       382 ~~~~~~~~~~~~~~~~~~~~~av~~~~----------------~~~~i~v~GG~~~--~~~-------~~~~~~~~~v~~  436 (656)
T 1k3i_A          382 VKSAGKRQSNRGVAPDAMCGNAVMYDA----------------VKGKILTFGGSPD--YQD-------SDATTNAHIITL  436 (656)
T ss_dssp             EEEEEECEETTEECCCCBTCEEEEEET----------------TTTEEEEECCBSS--SSS-------SBCCCCEEEEEC
T ss_pred             eecCCccccccccCCCCCCCceEeccC----------------CCCeEEEEeCCCC--CCC-------CCcCCcceEEEc
Confidence            74322111100 000123577777652                4899999999742  110       13455   4556


Q ss_pred             EEeecCCCCcee-c--ccCccccccceEEeCCCcEEEEcCcCCCCCCccCCCCCccccEEEeCCCCcEeecCCCCccccc
Q 043369          319 LTITAQNPKWEM-E--EMPLNRVMGDMILLPTGDVLIINGAAKGTAGWGAAREPVLNPVIYCPKINRFRILSPSLIPRLY  395 (526)
Q Consensus       319 ~d~~~~~~~W~~-~--~M~~~R~~~~~vvLpdG~V~vvGG~~~g~~g~~~~~~~~~~~e~YDP~t~~Wt~~a~~~~~R~y  395 (526)
                      ||+.  .++|+. .  +|+.+|.+++++++|||+|||+||.+.+. +|+ +.+++.++|+|||++++|+.+++|+++|.|
T Consensus       437 yd~~--~~~W~~~~~~~mp~~R~~~~~~~l~~g~i~v~GG~~~~~-~~~-~~~~~~~v~~ydp~t~~W~~~~~~~~~R~~  512 (656)
T 1k3i_A          437 GEPG--TSPNTVFASNGLYFARTFHTSVVLPDGSTFITGGQRRGI-PFE-DSTPVFTPEIYVPEQDTFYKQNPNSIVRVY  512 (656)
T ss_dssp             CSTT--SCCEEEECTTCCSSCCBSCEEEECTTSCEEEECCBSBCC-TTC-CCSBCCCCEEEEGGGTEEEECCCCSSCCCT
T ss_pred             CCCC--CCCeeEEccCCCCCCcccCCeEECCCCCEEEECCcccCc-CcC-CCCcccceEEEcCCCCceeecCCCCCcccc
Confidence            6664  578986 3  89999999999999999999999986432 222 345678899999999999999999999999


Q ss_pred             cccceecCCCEEEEecCCCCCCCCcCCCCCCceeeEEEcCcccCC--CCCCCCCeeeecCCCCccceecCCeEEEEEEec
Q 043369          396 HSTAHLLSDGRVLVGGSNPNVNYNFSALFPTELSLQAFYPPYFNL--MSNRSRPSISTVKPGAFLKLKYTENFLLGFKLR  473 (526)
Q Consensus       396 hs~a~LlpdG~V~v~GG~~~~~~~~~~~~p~~~~vE~y~Ppyl~~--~~~~~RP~i~~~~p~~~~~~~~g~~~~v~~~~~  473 (526)
                      |+++++++||+|||+||+.++.+     .++++++|+|+||||++  ++.+.||+|++.+|   +++.||++|+|+++. 
T Consensus       513 hs~a~ll~dg~v~v~GG~~~~~~-----~~~~~~~e~~~Ppyl~~~~~~~~~rP~i~~~~~---~~~~~g~~~~~~~~~-  583 (656)
T 1k3i_A          513 HSISLLLPDGRVFNGGGGLCGDC-----TTNHFDAQIFTPNYLYNSNGNLATRPKITRTST---QSVKVGGRITISTDS-  583 (656)
T ss_dssp             TEEEEECTTSCEEEEECCCCTTC-----SCCCCEEEEEECGGGBCTTSSBCCCCCEEEESC---SEEETTCEEEEEESS-
T ss_pred             ccHhhcCCCcEEEecCCCCCCCC-----CCCeeEEEEEeChhhccCCCCcCCCCcccccCC---ceecCCCEEEEEEec-
Confidence            99999999999999999988754     24588999999999986  35578999999448   899999999999863 


Q ss_pred             cCCcceEEEEEeecCcccccCCCCcceeecCce----------------------EEEEEEc-CCcccccEEEEcC
Q 043369          474 SGDLGEIFVTMVAPSFTTHSFAMNQRLLVLELH----------------------GALFLVN-DGVPSKAVWVQMK  526 (526)
Q Consensus       474 ~~~~~~~~v~l~~~~~~THs~n~~QR~v~L~~~----------------------ymlf~~~-~gvPS~~~~v~i~  526 (526)
                          .+.+|+|+|++|+||++||+||+|+|+++                      |||||++ +||||+|+||+|+
T Consensus       584 ----~~~~~~l~~~~~~th~~~~~qr~~~l~~~~~~~~~~~~~~p~~~~~~ppg~y~lf~~~~~g~ps~~~~v~~~  655 (656)
T 1k3i_A          584 ----SISKASLIRYGTATHTVNTDQRRIPLTLTNNGGNSYSFQVPSDSGVALPGYWMLFVMNSAGVPSVASTIRVT  655 (656)
T ss_dssp             ----CCSEEEEEECCEEETTBCSSCCEEECCEEEEETTEEEEECCSCTTTSCSEEEEEEEECTTSCBCCCEEEEEE
T ss_pred             ----cceEEEEEecCccccCcCCCCcEEecceEecCCCEEEEECCCCCCcCCCcCeEEEEECCCCcccccEEEEEe
Confidence                35789999999999999999999999987                      9999996 9999999999984
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens} Back     alignment and structure
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A Back     alignment and structure
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens} Back     alignment and structure
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens} Back     alignment and structure
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A Back     alignment and structure
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens} Back     alignment and structure
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus} Back     alignment and structure
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens} Back     alignment and structure
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens} Back     alignment and structure
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens} Back     alignment and structure
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli} Back     alignment and structure
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens} Back     alignment and structure
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus} Back     alignment and structure
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A Back     alignment and structure
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli} Back     alignment and structure
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A* Back     alignment and structure
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A* Back     alignment and structure
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A* Back     alignment and structure
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ... Back     alignment and structure
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis} Back     alignment and structure
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae} Back     alignment and structure
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae} Back     alignment and structure
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C Back     alignment and structure
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B* Back     alignment and structure
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A Back     alignment and structure
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens} Back     alignment and structure
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A* Back     alignment and structure
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus} Back     alignment and structure
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii} Back     alignment and structure
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae} Back     alignment and structure
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A Back     alignment and structure
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3 Back     alignment and structure
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A Back     alignment and structure
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans} Back     alignment and structure
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe} Back     alignment and structure
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A Back     alignment and structure
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1 Back     alignment and structure
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A Back     alignment and structure
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans} Back     alignment and structure
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum} Back     alignment and structure
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A Back     alignment and structure
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B* Back     alignment and structure
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A Back     alignment and structure
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 Back     alignment and structure
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum} Back     alignment and structure
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B* Back     alignment and structure
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis} Back     alignment and structure
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens} Back     alignment and structure
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens} Back     alignment and structure
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A Back     alignment and structure
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A Back     alignment and structure
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A Back     alignment and structure
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme} Back     alignment and structure
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ... Back     alignment and structure
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B* Back     alignment and structure
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae} Back     alignment and structure
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae} Back     alignment and structure
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3 Back     alignment and structure
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum} Back     alignment and structure
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A* Back     alignment and structure
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe} Back     alignment and structure
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum} Back     alignment and structure
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B* Back     alignment and structure
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A Back     alignment and structure
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A Back     alignment and structure
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae} Back     alignment and structure
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus} Back     alignment and structure
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae} Back     alignment and structure
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1 Back     alignment and structure
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A* Back     alignment and structure
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A Back     alignment and structure
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A Back     alignment and structure
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae} Back     alignment and structure
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1 Back     alignment and structure
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme} Back     alignment and structure
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae} Back     alignment and structure
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 Back     alignment and structure
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A Back     alignment and structure
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A* Back     alignment and structure
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans} Back     alignment and structure
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens} Back     alignment and structure
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1 Back     alignment and structure
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A Back     alignment and structure
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B* Back     alignment and structure
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe} Back     alignment and structure
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans} Back     alignment and structure
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae} Back     alignment and structure
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1 Back     alignment and structure
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A Back     alignment and structure
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A* Back     alignment and structure
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae} Back     alignment and structure
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B* Back     alignment and structure
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A Back     alignment and structure
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str} Back     alignment and structure
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli} Back     alignment and structure
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe} Back     alignment and structure
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A* Back     alignment and structure
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens} Back     alignment and structure
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens} Back     alignment and structure
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a Back     alignment and structure
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 Back     alignment and structure
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae} Back     alignment and structure
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A* Back     alignment and structure
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B* Back     alignment and structure
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A Back     alignment and structure
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae} Back     alignment and structure
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1 Back     alignment and structure
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A Back     alignment and structure
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens} Back     alignment and structure
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R* Back     alignment and structure
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R Back     alignment and structure
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B* Back     alignment and structure
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C Back     alignment and structure
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A Back     alignment and structure
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A Back     alignment and structure
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens} Back     alignment and structure
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X Back     alignment and structure
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A Back     alignment and structure
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A Back     alignment and structure
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B* Back     alignment and structure
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis} Back     alignment and structure
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A* Back     alignment and structure
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X Back     alignment and structure
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A Back     alignment and structure
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae} Back     alignment and structure
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A* Back     alignment and structure
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis} Back     alignment and structure
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A Back     alignment and structure
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli} Back     alignment and structure
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus} Back     alignment and structure
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A Back     alignment and structure
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A Back     alignment and structure
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R* Back     alignment and structure
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} Back     alignment and structure
>4d9s_A UVB-resistance protein UVR8; UV resistance, UV-B photoreceptor, tryptophan chromophores, homodimer, COP1, chromatin-binding protein; 1.70A {Arabidopsis thaliana} PDB: 4dnw_A 4dnu_A 4dnv_A Back     alignment and structure
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a Back     alignment and structure
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae} Back     alignment and structure
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens} Back     alignment and structure
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} Back     alignment and structure
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia} Back     alignment and structure
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A* Back     alignment and structure
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A Back     alignment and structure
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 Back     alignment and structure
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A Back     alignment and structure
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus} Back     alignment and structure
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A Back     alignment and structure
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris} Back     alignment and structure
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A Back     alignment and structure
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ... Back     alignment and structure
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A Back     alignment and structure
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A Back     alignment and structure
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens} Back     alignment and structure
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B* Back     alignment and structure
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482} Back     alignment and structure
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B* Back     alignment and structure
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A Back     alignment and structure
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae} Back     alignment and structure
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae} Back     alignment and structure
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae} Back     alignment and structure
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans} Back     alignment and structure
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron} Back     alignment and structure
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A Back     alignment and structure
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A Back     alignment and structure
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A Back     alignment and structure
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans} Back     alignment and structure
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus} Back     alignment and structure
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus} Back     alignment and structure
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens} Back     alignment and structure
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens} Back     alignment and structure
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii} Back     alignment and structure
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A Back     alignment and structure
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae} Back     alignment and structure
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A Back     alignment and structure
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A* Back     alignment and structure
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A Back     alignment and structure
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia} Back     alignment and structure
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A* Back     alignment and structure
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris} Back     alignment and structure
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B* Back     alignment and structure
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae} Back     alignment and structure
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B Back     alignment and structure
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A* Back     alignment and structure
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae} Back     alignment and structure
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R Back     alignment and structure
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ... Back     alignment and structure
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus} Back     alignment and structure
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 526
d1k3ia3387 b.69.1.1 (A:151-537) Galactose oxidase, central do 2e-37
d1k3ia1102 b.1.18.2 (A:538-639) Galactose oxidase, C-terminal 5e-13
>d1k3ia3 b.69.1.1 (A:151-537) Galactose oxidase, central domain {Fungi (Fusarium sp.) [TaxId: 29916]} Length = 387 Back     information, alignment and structure

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Galactose oxidase, central domain
family: Galactose oxidase, central domain
domain: Galactose oxidase, central domain
species: Fungi (Fusarium sp.) [TaxId: 29916]

 Score =  140 bits (352), Expect = 2e-37
 Identities = 74/423 (17%), Positives = 125/423 (29%), Gaps = 60/423 (14%)

Query: 28  GKWKLLKRSIGVSAMHMALLPND-RIIAFDRSHFGPSNITLPQGKCIKGVELETSDCYAH 86
           G+W      + +     A+ P   R++ +                        +      
Sbjct: 9   GRWGPT-IDLPIVPAAAAIEPTSGRVLMW--------------SSYRNDAFGGSPGGITL 53

Query: 87  AVEFDPITRKVRPLTI---QTDTWCSSGALLANGVLVQTGGYRLGERVVRYLKPCSDCDW 143
              +DP T  V   T+   + D +C   ++  NG +V TGG     +        SD   
Sbjct: 54  TSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGN--DAKKTSLYDSSSDSWI 111

Query: 144 EEDHQNGLISPRWYASNQILPNGKIIVVG-GRFQFTYEFIPRTSDSDRKILYQLPFLKET 202
                      R Y S+  + +G++  +G       +E          K    LP  K  
Sbjct: 112 PGPDMQ---VARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTSLPNAKVN 168

Query: 203 M-----HSPKIPNNLYPFLHLSTDGNLFIFANDRAILLDY--VNNRVMKNYPVMPGGISR 255
                       ++ + +L     G++F      A+   Y   +  V             
Sbjct: 169 PMLTADKQGLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVA 228

Query: 256 NYPSTGSSVLLPVNLSSINVHINNNNKPVVHSQVLICGGTLPDSNENAAEAQIFLPAAKS 315
                G++V+       I     + +                       ++     A   
Sbjct: 229 PDAMCGNAVMYDAVKGKILTFGGSPD---------------------YQDSDATTNAHII 267

Query: 316 CGRLTITAQNPKWEMEEMPLNRVMGDMILLPTGDVLIINGAAKGTAGWGAAREPVLNPVI 375
                 T+ N  +    +   R     ++LP G   I  G  +G         PV  P I
Sbjct: 268 TLGEPGTSPNTVFASNGLYFARTFHTSVVLPDGSTFITGGQRRGIPFED--STPVFTPEI 325

Query: 376 YCPKINRFRILSPSLIPRLYHSTAHLLSDGRVLVGGSNPNVNYNFSALFPTELSLQAFYP 435
           Y P+ + F   +P+ I R+YHS + LL DGRV  GG     +             Q F P
Sbjct: 326 YVPEQDTFYKQNPNSIVRVYHSISLLLPDGRVFNGGGGLCGDC-----TTNHFDAQIFTP 380

Query: 436 PYF 438
            Y 
Sbjct: 381 NYL 383
>d1k3ia1 b.1.18.2 (A:538-639) Galactose oxidase, C-terminal domain {Fungi (Fusarium sp.) [TaxId: 29916]} Length = 102 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query526
d1k3ia3387 Galactose oxidase, central domain {Fungi (Fusarium 100.0
d1zgka1288 Kelch-like ECH-associated protein 1, KEAP1 {Human 100.0
d1zgka1288 Kelch-like ECH-associated protein 1, KEAP1 {Human 99.95
d1k3ia3387 Galactose oxidase, central domain {Fungi (Fusarium 99.95
d1k3ia1102 Galactose oxidase, C-terminal domain {Fungi (Fusar 99.92
d1nr0a2299 Actin interacting protein 1 {Nematode (Caenorhabdi 97.92
d1nr0a1311 Actin interacting protein 1 {Nematode (Caenorhabdi 97.4
d1tbga_340 beta1-subunit of the signal-transducing G protein 97.21
d1nr0a1311 Actin interacting protein 1 {Nematode (Caenorhabdi 97.2
d1gxra_337 Groucho/tle1, C-terminal domain {Human (Homo sapie 96.99
d1erja_388 Tup1, C-terminal domain {Baker's yeast (Saccharomy 96.91
d1l0qa2301 Surface layer protein {Archaeon Methanosarcina maz 96.85
d1l0qa2301 Surface layer protein {Archaeon Methanosarcina maz 96.84
d1jmxb_346 Quinohemoprotein amine dehydrogenase B chain {Pseu 96.51
d1nr0a2299 Actin interacting protein 1 {Nematode (Caenorhabdi 96.39
d1gxra_337 Groucho/tle1, C-terminal domain {Human (Homo sapie 96.3
d1k8kc_371 Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taur 96.2
d1vyhc1317 Platelet-activating factor acetylhydrolase IB subu 96.02
d1pbyb_337 Quinohemoprotein amine dehydrogenase B chain {Para 95.0
d1k8kc_371 Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taur 94.83
d1q7fa_279 Brain tumor cg10719-pa {Fruit fly (Drosophila mela 94.72
d1rwia_260 Serine/threonine-protein kinase PknD {Mycobacteriu 94.45
d2p4oa1302 Hypothetical protein All0351 homologue {Nostoc pun 94.4
d1q7fa_279 Brain tumor cg10719-pa {Fruit fly (Drosophila mela 94.36
d1rwia_260 Serine/threonine-protein kinase PknD {Mycobacteriu 94.32
d1ri6a_333 Putative isomerase YbhE {Escherichia coli [TaxId: 93.94
d1erja_388 Tup1, C-terminal domain {Baker's yeast (Saccharomy 93.93
d1k32a3360 Tricorn protease domain 2 {Archaeon Thermoplasma a 93.29
d1pgua1325 Actin interacting protein 1 {Baker's yeast (Saccha 93.22
d1qksa2432 C-terminal (heme d1) domain of cytochrome cd1-nitr 90.89
d2ovrb2342 F-box/WD repeat-containing protein 7, FBXW7 {Human 90.38
d2ovrb2342 F-box/WD repeat-containing protein 7, FBXW7 {Human 88.81
d1vyhc1317 Platelet-activating factor acetylhydrolase IB subu 88.15
d2p4oa1302 Hypothetical protein All0351 homologue {Nostoc pun 87.3
d1tbga_340 beta1-subunit of the signal-transducing G protein 86.76
d1nexb2355 Cdc4 propeller domain {Baker's yeast (Saccharomyce 84.86
d1mdah_368 Methylamine dehydrogenase, H-chain {Paracoccus den 83.32
d2dg1a1319 Lactonase Drp35 {Staphylococcus aureus [TaxId: 128 82.72
d1pbyb_337 Quinohemoprotein amine dehydrogenase B chain {Para 82.72
d1pjxa_314 Diisopropylfluorophosphatase (phosphotriesterase, 82.56
d1yfqa_342 Cell cycle arrest protein BUB3 {Baker's yeast (Sac 82.46
d1k32a3360 Tricorn protease domain 2 {Archaeon Thermoplasma a 81.91
d1nexb2355 Cdc4 propeller domain {Baker's yeast (Saccharomyce 81.74
>d1k3ia3 b.69.1.1 (A:151-537) Galactose oxidase, central domain {Fungi (Fusarium sp.) [TaxId: 29916]} Back     information, alignment and structure
class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Galactose oxidase, central domain
family: Galactose oxidase, central domain
domain: Galactose oxidase, central domain
species: Fungi (Fusarium sp.) [TaxId: 29916]

Probab=100.00  E-value=4e-49  Score=405.76  Aligned_cols=359  Identities=21%  Similarity=0.319  Sum_probs=264.0

Q ss_pred             CCCCcEEEcccCCccceeEEEEec-CCeEEEEecccCCCCCccCCCCccccCccccCCCCcceEEEEeCCCCcEEeCcc-
Q 043369           25 DLEGKWKLLKRSIGVSAMHMALLP-NDRIIAFDRSHFGPSNITLPQGKCIKGVELETSDCYAHAVEFDPITRKVRPLTI-  102 (526)
Q Consensus        25 ~~~g~W~~~~~~~~v~~~~~a~l~-~gkv~~~gg~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~yDp~t~~w~~~~~-  102 (526)
                      +..|+|+.+.+.+ +.+.|+++++ +||||++||...  +.+.  +.          ......+++|||++++|++++. 
T Consensus         6 p~~g~W~~~~~~p-~~~~~~a~~~~~gkv~v~GG~~~--~~~~--~~----------~~~~~~~~~yd~~t~~w~~~~~~   70 (387)
T d1k3ia3           6 PGLGRWGPTIDLP-IVPAAAAIEPTSGRVLMWSSYRN--DAFG--GS----------PGGITLTSSWDPSTGIVSDRTVT   70 (387)
T ss_dssp             TTSCEEEEEEECS-SCCSEEEEETTTTEEEEEEECCC--TTTC--SC----------CCSEEEEEEECTTTCCBCCCEEE
T ss_pred             CCCCccCCcCCCC-ccccEEEEEeeCCEEEEEEeecC--cccC--CC----------CCceeEEEEEECCCCcEeecCCC
Confidence            4569999987654 5566766555 999999999752  1111  00          0123568899999999987653 


Q ss_pred             --CCccccccceEcCCCcEEEEcCCCCCccEEEEEcCCCCCCcccccCCCCCcccccceeEEecCCcEEEEcCccC----
Q 043369          103 --QTDTWCSSGALLANGVLVQTGGYRLGERVVRYLKPCSDCDWEEDHQNGLISPRWYASNQILPNGKIIVVGGRFQ----  176 (526)
Q Consensus       103 --~~~~fc~~~~~l~~G~l~v~GG~~~g~~~v~~ydp~~t~~W~~~~~~~m~~~R~y~s~~~L~dG~v~viGG~~~----  176 (526)
                        .++.||++++++.||+||++||..  .+++++|||. +++|++.  .+|+.+||||+++++.||+||++||...    
T Consensus        71 ~~~~~~~~~~~~~~~~g~i~v~Gg~~--~~~~~~yd~~-~~~w~~~--~~~~~~r~~~~~~~~~dG~v~v~GG~~~~~~~  145 (387)
T d1k3ia3          71 VTKHDMFCPGISMDGNGQIVVTGGND--AKKTSLYDSS-SDSWIPG--PDMQVARGYQSSATMSDGRVFTIGGSWSGGVF  145 (387)
T ss_dssp             ECSCCCSSCEEEECTTSCEEEECSSS--TTCEEEEEGG-GTEEEEC--CCCSSCCSSCEEEECTTSCEEEECCCCCSSSC
T ss_pred             CCCcccceeEEEEecCCcEEEeecCC--CcceeEecCc-cCccccc--ccccccccccceeeecCCceeeeccccccccc
Confidence              467899999999999999999964  4789999999 9999998  6899999999999999999999999753    


Q ss_pred             -CeEEEE-cCCCCCCCcceeecCCccccCC-----CCCCCCCCcceEEEecCCcEEEEEccc--eEEEeccCCeEEEecc
Q 043369          177 -FTYEFI-PRTSDSDRKILYQLPFLKETMH-----SPKIPNNLYPFLHLSTDGNLFIFANDR--AILLDYVNNRVMKNYP  247 (526)
Q Consensus       177 -~~~E~y-P~~~~~~~~~w~~~p~l~~~~~-----~~~~~~~~yp~~~~~~dG~Iy~~Gg~~--~~~yDp~t~~w~~~~p  247 (526)
                       .++|+| |.++     +|..++.+.....     ........|+.++...+|++|++|+..  .+.||+.+..|. ..+
T Consensus       146 ~~~v~~yd~~~~-----~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~g~~~~~~~~~~~~~~~~~-~~~  219 (387)
T d1k3ia3         146 EKNGEVYSPSSK-----TWTSLPNAKVNPMLTADKQGLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVK-SAG  219 (387)
T ss_dssp             CCCEEEEETTTT-----EEEEETTSCSGGGCCCCTTGGGTTTCSCCEEECGGGCEEECCSSSEEEEEECSTTCEEE-EEE
T ss_pred             cceeeeecCCCC-----ceeecCCCcccccccccccceeeccceeEEEEeCCCCEEEecCcCCcEEecCcccCcEe-ecc
Confidence             368999 8887     7876543321100     000113456777888899999999864  578899999987 344


Q ss_pred             CCCCCCC-CccCCCCceeecccccccccccccCCCCCccCcEEEEEcCCCCCCCchhhhhhcccccccceEEEEeecCC-
Q 043369          248 VMPGGIS-RNYPSTGSSVLLPVNLSSINVHINNNNKPVVHSQVLICGGTLPDSNENAAEAQIFLPAAKSCGRLTITAQN-  325 (526)
Q Consensus       248 ~~p~~~~-r~y~~~g~~v~lp~~~~~~~~~~~~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~~~d~~~~~-  325 (526)
                      .++.... ...+..+.+++++.                .++|||++||......         .......+.++..... 
T Consensus       220 ~~~~~~~~~~~~~~~~~~~~~~----------------~~g~v~v~GG~~~~~~---------~~~~~~~~~~~~~~~~~  274 (387)
T d1k3ia3         220 KRQSNRGVAPDAMCGNAVMYDA----------------VKGKILTFGGSPDYQD---------SDATTNAHIITLGEPGT  274 (387)
T ss_dssp             ECEETTEECCCCBTCEEEEEET----------------TTTEEEEECCBSSSSS---------SBCCCCEEEEECCSTTS
T ss_pred             ccccCcccCcccccccEEEeec----------------cCCceEEEEeccCCCC---------Ccccceeeccccccccc
Confidence            3333200 00111355555432                4899999999753211         1223334445443322 


Q ss_pred             --CCceec-ccCccccccceEEeCCCcEEEEcCcCCCCCCccCCCCCccccEEEeCCCCcEeecCCCCccccccccceec
Q 043369          326 --PKWEME-EMPLNRVMGDMILLPTGDVLIINGAAKGTAGWGAAREPVLNPVIYCPKINRFRILSPSLIPRLYHSTAHLL  402 (526)
Q Consensus       326 --~~W~~~-~M~~~R~~~~~vvLpdG~V~vvGG~~~g~~g~~~~~~~~~~~e~YDP~t~~Wt~~a~~~~~R~yhs~a~Ll  402 (526)
                        ..|+.. +|+.+|.++++++++||+|||+||...+...  ....++.++|+|||++++|+.+++|+++|.|||+++|+
T Consensus       275 ~~~~~~~~~~~p~~r~~~~~~~~~dg~i~v~GG~~~~~~~--~~~~~~~~ve~Ydp~~~~W~~~~~~~~~R~~Hs~a~l~  352 (387)
T d1k3ia3         275 SPNTVFASNGLYFARTFHTSVVLPDGSTFITGGQRRGIPF--EDSTPVFTPEIYVPEQDTFYKQNPNSIVRVYHSISLLL  352 (387)
T ss_dssp             CCEEEECTTCCSSCCBSCEEEECTTSCEEEECCBSBCCTT--CCCSBCCCCEEEEGGGTEEEECCCCSSCCCTTEEEEEC
T ss_pred             CCCceeeccccccccccceeeeccCCeEEEECCcccCccC--CCCcEeceEEEEECCCCeEEECCCCCCcccceEEEEEC
Confidence              345554 9999999999999999999999998744321  23456778999999999999999999999999999999


Q ss_pred             CCCEEEEecCCCCCCCCcCCCCCCceeeEEEcCcccCCC
Q 043369          403 SDGRVLVGGSNPNVNYNFSALFPTELSLQAFYPPYFNLM  441 (526)
Q Consensus       403 pdG~V~v~GG~~~~~~~~~~~~p~~~~vE~y~Ppyl~~~  441 (526)
                      +||||||+||+.+++.     ..++.++|+|+|||||++
T Consensus       353 ~dG~v~v~GG~~~~~~-----~~~~~~~e~y~Ppyl~~~  386 (387)
T d1k3ia3         353 PDGRVFNGGGGLCGDC-----TTNHFDAQIFTPNYLYNS  386 (387)
T ss_dssp             TTSCEEEEECCCCTTC-----SCCCCEEEEEECGGGBCT
T ss_pred             CCCEEEEEeCCCcCCC-----CcccceEEEEcchhccCC
Confidence            9999999999876643     335789999999999864
>d1zgka1 b.68.11.1 (A:322-609) Kelch-like ECH-associated protein 1, KEAP1 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1zgka1 b.68.11.1 (A:322-609) Kelch-like ECH-associated protein 1, KEAP1 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1k3ia3 b.69.1.1 (A:151-537) Galactose oxidase, central domain {Fungi (Fusarium sp.) [TaxId: 29916]} Back     information, alignment and structure
>d1k3ia1 b.1.18.2 (A:538-639) Galactose oxidase, C-terminal domain {Fungi (Fusarium sp.) [TaxId: 29916]} Back     information, alignment and structure
>d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Back     information, alignment and structure
>d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Back     information, alignment and structure
>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Back     information, alignment and structure
>d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon Methanosarcina mazei [TaxId: 2209]} Back     information, alignment and structure
>d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon Methanosarcina mazei [TaxId: 2209]} Back     information, alignment and structure
>d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]} Back     information, alignment and structure
>d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Back     information, alignment and structure
>d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]} Back     information, alignment and structure
>d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d1q7fa_ b.68.9.1 (A:) Brain tumor cg10719-pa {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Back     information, alignment and structure
>d1rwia_ b.68.9.1 (A:) Serine/threonine-protein kinase PknD {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d2p4oa1 b.68.6.3 (A:4-305) Hypothetical protein All0351 homologue {Nostoc punctiforme [TaxId: 272131]} Back     information, alignment and structure
>d1q7fa_ b.68.9.1 (A:) Brain tumor cg10719-pa {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Back     information, alignment and structure
>d1rwia_ b.68.9.1 (A:) Serine/threonine-protein kinase PknD {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d1ri6a_ b.69.11.1 (A:) Putative isomerase YbhE {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Back     information, alignment and structure
>d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1qksa2 b.70.2.1 (A:136-567) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Paracoccus denitrificans [TaxId: 266]} Back     information, alignment and structure
>d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d2p4oa1 b.68.6.3 (A:4-305) Hypothetical protein All0351 homologue {Nostoc punctiforme [TaxId: 272131]} Back     information, alignment and structure
>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1mdah_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]} Back     information, alignment and structure
>d2dg1a1 b.68.6.1 (A:6-324) Lactonase Drp35 {Staphylococcus aureus [TaxId: 1280]} Back     information, alignment and structure
>d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]} Back     information, alignment and structure
>d1pjxa_ b.68.6.1 (A:) Diisopropylfluorophosphatase (phosphotriesterase, DFP) {Squid (Loligo vulgaris) [TaxId: 6622]} Back     information, alignment and structure
>d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Back     information, alignment and structure
>d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure