Citrus Sinensis ID: 043420

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700--
MGDRPTGKFSATSFHTSMLHQVLGRSASDHLLHSYHRSFNGFVAKLTHDEAQRLKGMQGVMSVFPNGKKQLHTTRSWDFMGFSEHVKRATTESDIIVGMLDTGIWPESQSFSDENFGPPPKKWKGSCQTSSNFTCNNKIIGAKFYRSDKKFSPFDFKSPRDSEGHGTHTSSTAAGGLVSKASLFGIGFGTAIGGVPSARIAVYKICWFDGCADADILAAFDDAIADGVDIISISVGSFSAVNYFEDTIAIGSFHAMKKGILTSNSAGNSGPDAASLANVAPWTLSVAASTVDRKFVTRVKLGNGEVYEGISINTIDYKGKMFPLIYGGDAPNRTGGYQGSNSRFCSLGSLDEKLVQGKIVLCDELNDGFGAATARAVGSVMQGNDDRDVAYSFPLPNSYLDLYDGSKIASYLNSTSIPTATILKSTAEKNEFAPVVASFSSRGPNPITNDILKPDLTAPGVDILASWTQASSPSEGDPRISPFNIISGTSMSCPHATAAAAYVKSFYPSWSPAAIKSALMTTATPMSVEANSDAEFAYGSGHLNPSMAVNPGLVYDAGELDYVKFLCGQGYSDKNLSLVTGDNRSCSNSTNATVWDLNYPSFALSTKPGNNTTQVFHRTVTNVGSAVSTYRAVVYTRPGLMIKVQPSVLYFKSLYQKQSFVVTVTANVGKSVNMISASLVWDDGVHHVRSPVVAFVAPPTND
ccccccccccHHHHHHHHHHHHHcccccccEEEEEccEEEEEEEEccHHHHHHHHccccEEEEEEcccccccccccccccccccccccccccccEEEEccccccccccccccccccccccccccEEcccccccccccEEEEEEEEcccccccccccccccccccccccccccccccccccccccccccEEEEEccccccEEEEEEEccccccHHHHHHHHHHHHcccccEEEEEEcccccccccccHHHHHHHHHHHcccEEEEccccccccccccccccccEEEEEccccccEEEEEEEEccccEEEEEEEEcccccccccEEEEccccccccccccccccccccccccccccccccEEEEccccccHHHHccccEEEEEEccccccccccccccEEEEcHHcHHHHHHHHHcccccEEEEEccEEccccccccEEEcccccccccccccccccccccccEEEEEccccccccccccccccEEEEcccccccHHHHHHHHHHHHHcccccHHHHHHHHHHcccccccccccccccccccccccccccccccccccccHHHHHHHHHccccccccccccccccccccccccccccccccccEEEEcccccccEEEEEEEEEEccccccEEEEEEEccccEEEEEEEcEEEEEEcccEEEEEEEEEEEEcccccEEEEEEEEEcccEEEEcEEEEEEcccccc
ccccccccccHHHHHHHHHHHHHccccccHEEEEEcccEcEEEEEccHHHHHHHHccccEEEEcccccEEEcccccHHHcccccccccccccccEEEEEEccccccccccccccccccccccccEEEccccccccccEEEEEEEEccccccccccccccccccccccccHccccccccccccEEEcccccccccccccEEEEEEEEccccccHHHHHHHHHHHHHccccEEEEEEcccccccccccHHHHHHHHHHHccEEEEEEcccccccccEEEccccEEEEEEccccccccccEEEEccccEEEEEEEcccccccccEEEEEcccccccccccccccHHHcccccccHHHcccEEEEEEcccccHHHHHcccEEEEEEcccccccccccccccEEEcHHHHHHHHHHHHcccccEEEEEcccEEccccccEEEEEcccccccccHHHccccccccccHEEEEcccccccccccccEcEEEEEccHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHccEccccccccccccccccccccHHHcccccEEEEccHHHHHHHHHHccccHHHHHHHcccccccccccccccccccccEEEEEEcccccEEEEEEEEEEEccccccEEEEEEEccccEEEEEEccEEEEEEcccEEEEEEEEEEEccccccEEEEEEEEEcccEEEEccEEEEEcccccc
mgdrptgkfsatsfHTSMLHQVLgrsasdhlLHSYHRSFNGFVAKLTHDEAQRLKGMQGvmsvfpngkkqlhttrswdfmgfsehvkratteSDIIVGMLdtgiwpesqsfsdenfgpppkkwkgscqtssnftcnnkiigakfyrsdkkfspfdfksprdseghgthtsstaagglvskaslfgigfgtaiggvPSARIAVYKIcwfdgcadADILAAFDDAIADGVDIISISVGsfsavnyfedtIAIGSFHAMKKGiltsnsagnsgpdaaslanvapwTLSVAASTVDRKFVTRvklgngevyegisintidykgkmfpliyggdapnrtggyqgsnsrfcslgsldeklVQGKIVLCDELNDGFGAATARAVGsvmqgnddrdvaysfplpnsyldlydgskiasylnstsiptatilkstaeknefapvvasfssrgpnpitndilkpdltapgvdilaswtqasspsegdprispfniisgtsmscphATAAAAYVKsfypswspaaIKSALMttatpmsveansdaefaygsghlnpsmavnpglvydageLDYVKFLCgqgysdknlslvtgdnrscsnstnatvwdlnypsfalstkpgnnttQVFHRTVTNVGSAVSTYRAVvytrpglmikvqpsVLYFKSLYQKQSFVVTVTANVGKSVNMISASLvwddgvhhvrspvvafvapptnd
mgdrptgkfsatsfHTSMLHQVLGRSASDHLLHSYHRSFNGFVAKLTHDEAQRLKGMQGVMSVFPNGKKQLHTTRSWDFMGFSEHVKRATTESDIIVGMLDTGIWPESQSFSDENFGPPPKKWKGSCQTSSNFTCNNKIIGAKFYRSDKKFSPFDFKSPRDSEGHGTHTSSTAAGGLVSKASLFGIGFGTAIGGVPSARIAVYKICWFDGCADADILAAFDDAIADGVDIISISVGSFSAVNYFEDTIAIGSFHAMKKGILTSNSAGNSGPDAASLANVAPWTLSvaastvdrkfvtrvklgngevyegisintidykGKMFPLIYGGDAPNRTGGYQGSNSRFCSLGSLDEKLVQGKIVLCDELNDGFGAATARAVGSVMQGNDDRDVAYSFPLPNSYLDLYDGSKIASYLNSTSIPTATILKSTAEKNEFAPVvasfssrgpnpITNDILKPDLTAPGVDILASWtqasspsegdpRISPFNIISGTSMSCPHATAAAAYVKSFYPSWSPAAIKSALMTTATPMSVEANSDAEFAYGSGHLNPSMAVNPGLVYDAGELDYVKFLCGQGYSDKNLSLVTGDNRSCSNSTNATVWDLNYPSFALSTKPGNNTTQVFHRTvtnvgsavsTYRAVVYTRPGLMIKVQPSVLYFKSLYQKQSFVVTVTANVGKSVNMISASLVWDDGVHHVRSPVVafvapptnd
MGDRPTGKFSATSFHTSMLHQVLGRSASDHLLHSYHRSFNGFVAKLTHDEAQRLKGMQGVMSVFPNGKKQLHTTRSWDFMGFSEHVKRATTESDIIVGMLDTGIWPESQSFSDENFGPPPKKWKGSCQTSSNFTCNNKIIGAKFYRSDKKFSPFDFKSPRDSEGHGTHTSSTAAGGLVSKASLFGIGFGTAIGGVPSARIAVYKICWFDGCadadilaafddaiadGVDIISISVGSFSAVNYFEDTIAIGSFHAMKKGILTSNSAGNSGPDAASLANVAPWTLSVAASTVDRKFVTRVKLGNGEVYEGISINTIDYKGKMFPLIYGGDAPNRTGGYQGSNSRFCSLGSLDEKLVQGKIVLCDELNDGFGAATARAVGSVMQGNDDRDVAYSFPLPNSYLDLYDGSKIASYLNSTSIPTATILKSTAEKNEFAPVVASFSSRGPNPITNDILKPDLTAPGVDILASWTQASSPSEGDPRISPFNIISGTSMSCPHATAAAAYVKSFYPSWSPAAIKSALMTTATPMSVEANSDAEFAYGSGHLNPSMAVNPGLVYDAGELDYVKFLCGQGYSDKNLSLVTGDNRSCSNSTNATVWDLNYPSFALSTKPGNNTTQVFHRTVTNVGSAVSTYRAVVYTRPGLMIKVQPSVLYFKSLYQKQSFVVTVTANVGKSVNMISASLVWDDGVHHVRSPVVAFVAPPTND
*****************MLHQVLGRSASDHLLHSYHRSFNGFVAKLTHDEAQRLKGMQGVMSVFPNGKKQLHTTRSWDFMGFSEHVKRATTESDIIVGMLDTGIWP************************SNFTCNNKIIGAKFYRS****************************GLVSKASLFGIGFGTAIGGVPSARIAVYKICWFDGCADADILAAFDDAIADGVDIISISVGSFSAVNYFEDTIAIGSFHAMKKGILT************SLANVAPWTLSVAASTVDRKFVTRVKLGNGEVYEGISINTIDYKGKMFPLIYGGDAPNRTGGYQGSNSRFCSLGSLDEKLVQGKIVLCDELNDGFGAATARAVGSVMQGNDDRDVAYSFPLPNSYLDLYDGSKIASYLNSTSIPTATILKST*****FAPVV************NDILKPDLTAPGVDILASW***************FNIISGTSMSCPHATAAAAYVKSFYPSWSPAAIKSALMTTA***********EFAYGSGHLNPSMAVNPGLVYDAGELDYVKFLCGQGYSDKNLSLVTGDNRSCSNSTNATVWDLNYPSFALSTKPGNNTTQVFHRTVTNVGSAVSTYRAVVYTRPGLMIKVQPSVLYFKSLYQKQSFVVTVTANVGKSVNMISASLVWDDGVHHVRSPVVAFV******
*************FH****************LHSYHRSFNGFVAKLTHDEAQRLKGMQGVMSVFPNGKKQLHTTRSWDFMGFSE**********IIVGMLDTGIWPESQSFSDENFGPPPKKWKGSCQTSSNFTCNNKIIGAKFYRSDKKFSPFDFKSPRDSEGHGTHTSSTAAGGLVSKASLFGIGFGTAIGGVPSARIAVYKICWFDGCADADILAAFDDAIADGVDIISISVGSFSAVNYFEDTIAIGSFHAMKKGILTSNSAGNSGPDAASLANVAPWTLSVAASTVDRKFVTRVKLGNGEVYEGISINTIDYKGKMFPLIYGGDAPNRTGGYQGSNSRFCSLGSLDEKLVQGKIVLCDELNDGFGAATARAVGSVMQGNDDRDVAYSFPLPNSYLDLYDGSKIASYLNSTSIPTATILKSTAEKNEFAPVVASFSSRGPNPITNDILKPDLTAPGVDILASWTQASSP*EGDPRISPFNIISGTSMSCPHATAAAAYVKSFYPSWSPAAIKSALMTTATPMSVEANSDAEFAYGSGHLNPSMAVNPGLVYDAGELDYVKFLCGQGYSDKNLSLVTGDNRSCS**TNATVWDLNYPSFALSTKPGNNTTQVFHRTVTNVGSAVSTYRAVVYTRPGLMIKVQPSVLYFKSLYQKQSFVVTVTANVGKSVNMISASLVWDDGVHHVRSPVVAFVAPP***
********FSATSFHTSMLHQVLGRSASDHLLHSYHRSFNGFVAKLTHDEAQRLKGMQGVMSVFPNGKKQLHTTRSWDFMGFSEHVKRATTESDIIVGMLDTGIWPESQSFSDENFGPPPKKWKGSCQTSSNFTCNNKIIGAKFYRSDKKFSPFDFKS*************TAAGGLVSKASLFGIGFGTAIGGVPSARIAVYKICWFDGCADADILAAFDDAIADGVDIISISVGSFSAVNYFEDTIAIGSFHAMKKGILTSNSAGNSGPDAASLANVAPWTLSVAASTVDRKFVTRVKLGNGEVYEGISINTIDYKGKMFPLIYGGDAPNRTGGYQGSNSRFCSLGSLDEKLVQGKIVLCDELNDGFGAATARAVGSVMQGNDDRDVAYSFPLPNSYLDLYDGSKIASYLNSTSIPTATILKSTAEKNEFAPVVASFSSRGPNPITNDILKPDLTAPGVDILASWT********DPRISPFNIISGTSMSCPHATAAAAYVKSFYPSWSPAAIKSALMTTATPMSVEANSDAEFAYGSGHLNPSMAVNPGLVYDAGELDYVKFLCGQGYSDKNLSLVTGDNRSCSNSTNATVWDLNYPSFALSTKPGNNTTQVFHRTVTNVGSAVSTYRAVVYTRPGLMIKVQPSVLYFKSLYQKQSFVVTVTANVGKSVNMISASLVWDDGVHHVRSPVVAFVAPPTND
*******KFSATSFHTSMLHQVLGRSASDHLLHSYHRSFNGFVAKLTHDEAQRLKGMQGVMSVFPNGKKQLHTTRSWDFMGFSEHVKRATTESDIIVGMLDTGIWPESQSFSDENFGPPPKKWKGSCQTSSNFTCNNKIIGAKFYRSDK****************GTHTSSTAAGGLVSKASLFGIGFGTAIGGVPSARIAVYKICWFDGCADADILAAFDDAIADGVDIISISVGSFSAVNYFEDTIAIGSFHAMKKGILTSNSAGNSGPDAASLANVAPWTLSVAASTVDRKFVTRVKLGNGEVYEGISINTIDYKGKMFPLIYGGDAPNRTGGYQGSNSRFCSLGSLDEKLVQGKIVLCDELNDGFGAATARAVGSVMQGNDDRDVAYSFPLPNSYLDLYDGSKIASYLNSTSIPTATILKSTAEKNEFAPVVASFSSRGPNPITNDILKPDLTAPGVDILASWTQASSPSEGDPRISPFNIISGTSMSCPHATAAAAYVKSFYPSWSPAAIKSALMTTATPMSVEANSDAEFAYGSGHLNPSMAVNPGLVYDAGELDYVKFLCGQGYSDKNLSLVTGDNRSCSNSTNATVWDLNYPSFALSTKPGNNTTQVFHRTVTNVGSAVSTYRAVVYTRPGLMIKVQPSVLYFKSLYQKQSFVVTVTANVGKSVNMISASLVWDDGVHHVRSPVVAFVAP****
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MGDRPTGKFSATSFHTSMLHQVLGRSASDHLLHSYHRSFNGFVAKLTHDEAQRLKGMQGVMSVFPNGKKQLHTTRSWDFMGFSEHVKRATTESDIIVGMLDTGIWPESQSFSDENFGPPPKKWKGSCQTSSNFTCNNKIIGAKFYRSDKKFSPFDFKSPRDSEGHGTHTSSTAAGGLVSKASLFGIGFGTAIGGVPSARIAVYKICWFDGCADADILAAFDDAIADGVDIISISVGSFSAVNYFEDTIAIGSFHAMKKGILTSNSAGNSGPDAASLANVAPWTLSVAASTVDRKFVTRVKLGNGEVYEGISINTIDYKGKMFPLIYGGDAPNRTGGYQGSNSRFCSLGSLDEKLVQGKIVLCDELNDGFGAATARAVGSVMQGNDDRDVAYSFPLPNSYLDLYDGSKIASYLNSTSIPTATILKSTAEKNEFAPVVASFSSRGPNPITNDILKPDLTAPGVDILASWTQASSPSEGDPRISPFNIISGTSMSCPHATAAAAYVKSFYPSWSPAAIKSALMTTATPMSVEANSDAEFAYGSGHLNPSMAVNPGLVYDAGELDYVKFLCGQGYSDKNLSLVTGDNRSCSNSTNATVWDLNYPSFALSTKPGNNTTQVFHRTVTNVGSAVSTYRAVVYTRPGLMIKVQPSVLYFKSLYQKQSFVVTVTANVGKSVNMISASLVWDDGVHHVRSPVVAFVAPPTND
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query702 2.2.26 [Sep-21-2011]
Q39547731 Cucumisin OS=Cucumis melo N/A no 0.972 0.934 0.565 0.0
Q9LLL8749 Xylem serine proteinase 1 no no 0.990 0.927 0.467 1e-166
O65351757 Subtilisin-like protease no no 0.933 0.865 0.447 1e-153
O64495775 Subtilisin-like protease no no 0.964 0.873 0.395 1e-130
P29141806 Minor extracellular prote yes no 0.692 0.602 0.250 8e-25
P0DD35 1169 C5a peptidase OS=Streptoc yes no 0.468 0.281 0.255 1e-10
P0DD34 1169 C5a peptidase OS=Streptoc N/A no 0.468 0.281 0.255 1e-10
Q5X9R0 1184 C5a peptidase OS=Streptoc N/A no 0.468 0.277 0.258 2e-10
Q8NZ80 1150 C5a peptidase OS=Streptoc N/A no 0.470 0.286 0.256 4e-10
P58099 1181 C5a peptidase OS=Streptoc N/A no 0.468 0.278 0.258 5e-10
>sp|Q39547|CUCM1_CUCME Cucumisin OS=Cucumis melo PE=1 SV=1 Back     alignment and function desciption
 Score =  767 bits (1980), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 394/697 (56%), Positives = 498/697 (71%), Gaps = 14/697 (2%)

Query: 1   MGDRPTGKFSATSFHTSMLHQVLGRS-ASDHLLHSYHRSFNGFVAKLTHDEAQRLKGMQG 59
           MG +     SA   H +ML QV+G + A + +LH+Y RSFNGF  KLT +EA+++  M+G
Sbjct: 38  MGRKLEDPDSAHLHHRAMLEQVVGSTFAPESVLHTYKRSFNGFAVKLTEEEAEKIASMEG 97

Query: 60  VMSVFPNGKKQLHTTRSWDFMGFSEHV-KRATTESDIIVGMLDTGIWPESQSFSDENFGP 118
           V+SVF N   +LHTTRSWDF+GF   V +R+  ES+I+VG+LDTGIWPES SF DE F P
Sbjct: 98  VVSVFLNEMNELHTTRSWDFLGFPLTVPRRSQVESNIVVGVLDTGIWPESPSFDDEGFSP 157

Query: 119 PPKKWKGSCQTSSNFTCNNKIIGAKFYRSDKKFSPFDFKSPRDSEGHGTHTSSTAAGGLV 178
           PP KWKG+C+TS+NF CN KIIGA+ Y   +  SP D   PRD+ GHGTHT+STAAGGLV
Sbjct: 158 PPPKWKGTCETSNNFRCNRKIIGARSYHIGRPISPGDVNGPRDTNGHGTHTASTAAGGLV 217

Query: 179 SKASLFGIGFGTAIGGVPSARIAVYKICWFDGCADADILAAFDDAIADGVDIISISVGSF 238
           S+A+L+G+G GTA GGVP ARIA YK+CW DGC+D DILAA+DDAIADGVDIIS+SVG  
Sbjct: 218 SQANLYGLGLGTARGGVPLARIAAYKVCWNDGCSDTDILAAYDDAIADGVDIISLSVGGA 277

Query: 239 SAVNYFEDTIAIGSFHAMKKGILTSNSAGNSGPDAASLANVAPWTLSVAASTVDRKFVTR 298
           +  +YF D IAIGSFHA+++GILTSNSAGN GP+  + A+++PW LSVAAST+DRKFVT+
Sbjct: 278 NPRHYFVDAIAIGSFHAVERGILTSNSAGNGGPNFFTTASLSPWLLSVAASTMDRKFVTQ 337

Query: 299 VKLGNGEVYEGISINTIDYKGKMFPLIYGGDAPNRTGGYQGSNSRFCSLGSLDEKLVQGK 358
           V++GNG+ ++G+SINT D   + +PL+ G D PN   G+  S SRFC+  S++  L++GK
Sbjct: 338 VQIGNGQSFQGVSINTFD--NQYYPLVSGRDIPNT--GFDKSTSRFCTDKSVNPNLLKGK 393

Query: 359 IVLCDELNDG---FGAATARAVGSVMQGNDDRDVAYSFPLPNSYLDLYDGSKIASYLNST 415
           IV+C E + G   F  +   A G +M  N  RD A S+PLP+S LD  D      Y+ S 
Sbjct: 394 IVVC-EASFGPHEFFKSLDGAAGVLMTSN-TRDYADSYPLPSSVLDPNDLLATLRYIYSI 451

Query: 416 SIPTATILKSTAEKNEFAPVVASFSSRGPNPITNDILKPDLTAPGVDILASWTQASSPSE 475
             P ATI KST   N  APVV SFSSRGPN  T D++KPD++ PGV+ILA+W    +P  
Sbjct: 452 RSPGATIFKSTTILNASAPVVVSFSSRGPNRATKDVIKPDISGPGVEILAAWPSV-APVG 510

Query: 476 GDPRISPFNIISGTSMSCPHATAAAAYVKSFYPSWSPAAIKSALMTTATPMSVEANSDAE 535
           G  R + FNIISGTSMSCPH T  A YVK++ P+WSPAAIKSALMTTA+PM+   N  AE
Sbjct: 511 GIRRNTLFNIISGTSMSCPHITGIATYVKTYNPTWSPAAIKSALMTTASPMNARFNPQAE 570

Query: 536 FAYGSGHLNPSMAVNPGLVYDAGELDYVKFLCGQGYSDKNLSLVTGDNRSCSNSTNATVW 595
           FAYGSGH+NP  AV PGLVYDA E DYVKFLCGQGY+ + +  +TGD  +C++     VW
Sbjct: 571 FAYGSGHVNPLKAVRPGLVYDANESDYVKFLCGQGYNTQAVRRITGDYSACTSGNTGRVW 630

Query: 596 DLNYPSFALSTKPGNNTTQVFHRTVTNVGSAVSTYRAVVYTRPGLMIKVQPSVLYFKSLY 655
           DLNYPSF LS  P     Q F+RT+T+V    STYRA++    GL I V P+VL F  L 
Sbjct: 631 DLNYPSFGLSVSPSQTFNQYFNRTLTSVAPQASTYRAMISAPQGLTISVNPNVLSFNGLG 690

Query: 656 QKQSFVVTVTANVGKSVNMISASLVWDDGVHHVRSPV 692
            ++SF +TV  ++   V  +SASLVW DGVH+VRSP+
Sbjct: 691 DRKSFTLTVRGSIKGFV--VSASLVWSDGVHYVRSPI 725

Cucumis melo (taxid: 3656)
EC: 3EC: .EC: 4EC: .EC: 2EC: 1EC: .EC: 2EC: 5
>sp|Q9LLL8|XSP1_ARATH Xylem serine proteinase 1 OS=Arabidopsis thaliana GN=XSP1 PE=2 SV=1 Back     alignment and function description
>sp|O65351|SUBL_ARATH Subtilisin-like protease OS=Arabidopsis thaliana GN=ARA12 PE=1 SV=1 Back     alignment and function description
>sp|O64495|SDD1_ARATH Subtilisin-like protease SDD1 OS=Arabidopsis thaliana GN=SDD1 PE=2 SV=1 Back     alignment and function description
>sp|P29141|SUBV_BACSU Minor extracellular protease vpr OS=Bacillus subtilis (strain 168) GN=vpr PE=1 SV=1 Back     alignment and function description
>sp|P0DD35|C5AP_STRPQ C5a peptidase OS=Streptococcus pyogenes serotype M3 (strain SSI-1) GN=scpA PE=3 SV=1 Back     alignment and function description
>sp|P0DD34|C5AP_STRP3 C5a peptidase OS=Streptococcus pyogenes serotype M3 (strain ATCC BAA-595 / MGAS315) GN=scpA PE=3 SV=1 Back     alignment and function description
>sp|Q5X9R0|C5AP_STRP6 C5a peptidase OS=Streptococcus pyogenes serotype M6 (strain ATCC BAA-946 / MGAS10394) GN=scpA PE=3 SV=1 Back     alignment and function description
>sp|Q8NZ80|C5AP_STRP8 C5a peptidase OS=Streptococcus pyogenes serotype M18 (strain MGAS8232) GN=scpA PE=3 SV=1 Back     alignment and function description
>sp|P58099|C5AP_STRP1 C5a peptidase OS=Streptococcus pyogenes serotype M1 GN=scpA PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query702
296086155697 unnamed protein product [Vitis vinifera] 0.988 0.995 0.692 0.0
359486600732 PREDICTED: cucumisin [Vitis vinifera] 0.988 0.948 0.692 0.0
224112661697 predicted protein [Populus trichocarpa] 0.984 0.991 0.676 0.0
224112657701 predicted protein [Populus trichocarpa] 0.982 0.984 0.675 0.0
359486594724 PREDICTED: cucumisin-like [Vitis vinifer 0.988 0.958 0.670 0.0
255566528705 Cucumisin precursor, putative [Ricinus c 0.991 0.987 0.659 0.0
225449348742 PREDICTED: cucumisin-like [Vitis vinifer 0.987 0.933 0.665 0.0
296086162 999 unnamed protein product [Vitis vinifera] 0.982 0.690 0.665 0.0
359486591762 PREDICTED: cucumisin-like [Vitis vinifer 0.988 0.910 0.655 0.0
359486596743 PREDICTED: cucumisin-like [Vitis vinifer 0.982 0.928 0.653 0.0
>gi|296086155|emb|CBI31596.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
 Score =  997 bits (2578), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 484/699 (69%), Positives = 566/699 (80%), Gaps = 5/699 (0%)

Query: 1   MGDRPTGKFSATSFHTSMLHQVLGRSASDHLLHSYHRSFNGFVAKLTHDEAQRLKGMQGV 60
           MGD P G  SA++ HT+ML QV G  AS++LLHSY RSFNGFVAKLT +E ++L G++GV
Sbjct: 1   MGDLPKGDISASTLHTNMLQQVFGSRASEYLLHSYQRSFNGFVAKLTMEEKKKLSGIEGV 60

Query: 61  MSVFPNGKKQLHTTRSWDFMGFSEHVKRATTESDIIVGMLDTGIWPESQSFSDENFGPPP 120
           +SVFPNGKKQLHTTRSWDFMGF + VKR TTESDII+GMLDTGIWPES SFSDE FGP P
Sbjct: 61  VSVFPNGKKQLHTTRSWDFMGFPQKVKRTTTESDIIIGMLDTGIWPESASFSDEGFGPQP 120

Query: 121 KKWKGSCQTSSNFTCNNKIIGAKFYRSDKKFSPFDFKSPRDSEGHGTHTSSTAAGGLVSK 180
            KWKG+CQTSSNFTCNNKIIGA++YR+D K  P D KSPRDS GHGTHT+STAAG +V  
Sbjct: 121 SKWKGTCQTSSNFTCNNKIIGARYYRTDGKLGPTDIKSPRDSLGHGTHTASTAAGRMVRG 180

Query: 181 ASLFGIGFGTAIGGVPSARIAVYKICWFDGCADADILAAFDDAIADGVDIISISVGSFSA 240
           ASL G+G G A GGVPSARIAVYKICW DGC DADILAAFDDAIADGVDIIS+SVG +  
Sbjct: 181 ASLLGLGSGAARGGVPSARIAVYKICWHDGCPDADILAAFDDAIADGVDIISLSVGGYDP 240

Query: 241 VNYFEDTIAIGSFHAMKKGILTSNSAGNSGPDAASLANVAPWTLSVAASTVDRKFVTRVK 300
            +YFED+IAIG+FH+MK GILTSNSAGN+GPD A++ N +PW+LSVAAST+DRKFVT+VK
Sbjct: 241 YDYFEDSIAIGAFHSMKNGILTSNSAGNTGPDPATITNFSPWSLSVAASTIDRKFVTKVK 300

Query: 301 LGNGEVYEGISINTIDYKGKMFPLIYGGDAPNRTGGYQGSNSRFCSLGSLDEKLVQGKIV 360
           LGN +VYEG+S+NT +    M+P+IYGGDAPN TGGY  S SR+C   SLD+ LV GKIV
Sbjct: 301 LGNNKVYEGVSVNTFEMD-DMYPIIYGGDAPNTTGGYDSSYSRYCYEDSLDKSLVDGKIV 359

Query: 361 LCDELNDGFGAATARAVGSVMQGNDDRDVAYSFPLPNSYLDLYDGSKIASYLNSTSIPTA 420
           LCD L  G  A  A AVG+VMQ     D AY + LP SYLD  DG K+  YLNSTS P A
Sbjct: 360 LCDWLTSGKAAIAAGAVGTVMQDGGYSDSAYIYALPASYLDPRDGGKVHHYLNSTSKPMA 419

Query: 421 TILKSTAEKNEFAPVVASFSSRGPNPITNDILKPDLTAPGVDILASWTQASSPS--EGDP 478
            I KS   K+E AP V SFSSRGPNPIT+DILKPDLTAPGVDILA+WT+ASS +  EGD 
Sbjct: 420 IIQKSVEVKDELAPFVVSFSSRGPNPITSDILKPDLTAPGVDILAAWTEASSVTGKEGDT 479

Query: 479 RISPFNIISGTSMSCPHATAAAAYVKSFYPSWSPAAIKSALMTTATPMSVEANSDAEFAY 538
           R+ P++IISGTSMSCPHA+AAAAY+KSF+P+WSPAAIKSALMTTA  MSV+ N+D EFAY
Sbjct: 480 RVVPYSIISGTSMSCPHASAAAAYIKSFHPTWSPAAIKSALMTTAARMSVKTNTDMEFAY 539

Query: 539 GSGHLNPSMAVNPGLVYDAGELDYVKFLCGQGYSDKNLSLVTGDNRSCSNSTNATVWDLN 598
           G+GH++P  AV+PGL+YDAGE +YV FLCGQGYS K+L L+TGD  +CS + N TVWDLN
Sbjct: 540 GAGHIDPVKAVHPGLIYDAGEANYVNFLCGQGYSTKHLRLITGDKSTCSATMNGTVWDLN 599

Query: 599 YPSFALSTKPGNNTTQVFHRTVTNVGSAVSTYRAVVYTRPGLMIKVQPSVLYFKSLYQKQ 658
           YPSF +STK G   T++F RTVTNVGSAVSTY+A++    GL +KV+PSVL FKSL QK+
Sbjct: 600 YPSFTISTKSGVTVTRIFTRTVTNVGSAVSTYKAILAVPSGLSVKVEPSVLSFKSLGQKK 659

Query: 659 SFVVTVTANVGKSVNMISASLVWDDGVHHVRSPVVAFVA 697
           +F +TV   V K V  IS SLVWDDG+H VRSP+VAFV+
Sbjct: 660 TFTMTVGTAVDKGV--ISGSLVWDDGIHQVRSPIVAFVS 696

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|359486600|ref|XP_002281887.2| PREDICTED: cucumisin [Vitis vinifera] Back     alignment and taxonomy information
>gi|224112661|ref|XP_002316254.1| predicted protein [Populus trichocarpa] gi|222865294|gb|EEF02425.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|224112657|ref|XP_002316252.1| predicted protein [Populus trichocarpa] gi|222865292|gb|EEF02423.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|359486594|ref|XP_002281790.2| PREDICTED: cucumisin-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|255566528|ref|XP_002524249.1| Cucumisin precursor, putative [Ricinus communis] gi|223536526|gb|EEF38173.1| Cucumisin precursor, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|225449348|ref|XP_002277563.1| PREDICTED: cucumisin-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|296086162|emb|CBI31603.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|359486591|ref|XP_002277242.2| PREDICTED: cucumisin-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|359486596|ref|XP_002277283.2| PREDICTED: cucumisin-like [Vitis vinifera] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query702
TAIR|locus:2168524693 AT5G59190 "AT5G59190" [Arabido 0.972 0.985 0.490 8.6e-175
TAIR|locus:2102807736 AT3G46850 "AT3G46850" [Arabido 0.975 0.930 0.488 4.4e-171
TAIR|locus:2153296741 AT5G59100 "AT5G59100" [Arabido 0.975 0.924 0.477 9.1e-171
TAIR|locus:2102792738 AT3G46840 "AT3G46840" [Arabido 0.977 0.929 0.490 4e-170
TAIR|locus:2153291736 SBT4.12 "AT5G59090" [Arabidops 0.954 0.910 0.487 5e-170
TAIR|locus:2168434732 SBT4.13 "AT5G59120" [Arabidops 0.960 0.920 0.485 4.5e-169
TAIR|locus:2154528713 AT5G58840 "AT5G58840" [Arabido 0.457 0.450 0.522 8.5e-162
TAIR|locus:2154513701 AT5G58830 "AT5G58830" [Arabido 0.519 0.520 0.465 2e-160
TAIR|locus:2154503703 AT5G58820 "AT5G58820" [Arabido 0.452 0.452 0.527 2.6e-160
TAIR|locus:2168444732 AT5G59130 "AT5G59130" [Arabido 0.957 0.918 0.477 1.1e-158
TAIR|locus:2168524 AT5G59190 "AT5G59190" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1698 (602.8 bits), Expect = 8.6e-175, P = 8.6e-175
 Identities = 348/709 (49%), Positives = 463/709 (65%)

Query:     1 MGDRPTGKFSATSFHTSMLHQVLGRSASDHLL-HSYHRSFNGFVAKLTHDEAQRLKGMQG 59
             MG  P  K+S  S H S+L +++G  A+ HLL  SY RSFNGF A L+  E+Q+L+ M+ 
Sbjct:     1 MGTLPEIKYSPPSHHLSILQKLVGTIAASHLLVRSYKRSFNGFAANLSQAESQKLQNMKE 60

Query:    60 VMSVFPNGKKQLHTTRSWDFMGFSEHVKRATT-ESDIIVGMLDTGIWPESQSFSDENFGP 118
             V+SVFP+   +L TTRSWDF+GF E  +R +  ESD+IVG++D+GIWPES+SF DE FGP
Sbjct:    61 VVSVFPSKSHELTTTRSWDFVGFGEKARRESVKESDVIVGVIDSGIWPESESFDDEGFGP 120

Query:   119 PPKKWKGSCQTSSNFTCNNKIIGAKFYRSDKKFSPFDFKSPRDSEGHGTHTSSTAAGGLV 178
             PPKKWKGSC+    F CNNK+IGA+FY    KF+     S RD EGHGTHT+STAAG  V
Sbjct:   121 PPKKWKGSCKGGLKFACNNKLIGARFYN---KFAD----SARDEEGHGTHTASTAAGNAV 173

Query:   179 SKASLFGIGFGTAIGGVPSARIAVYKICWFDGCXXXXXXXXXXXXXXXGVDIISISVGSF 238
               AS +G+  GTA GGVPSARIA YK+C F+ C               GVD+ISIS+ + 
Sbjct:   174 QAASFYGLAQGTARGGVPSARIAAYKVC-FNRCNDVDILAAFDDAIADGVDVISISISAD 232

Query:   239 SAVNYFEDTIAIGSFHAMKKGILTSNSAGNSGPDAASLANVAPWTLSVAASTVDRKFVTR 298
                N    ++AIGSFHAM +GI+T+ SAGN+GPD  S+ANV+PW ++VAAS  DR+F+ R
Sbjct:   233 YVSNLLNASVAIGSFHAMMRGIITAGSAGNNGPDQGSVANVSPWMITVAASGTDRQFIDR 292

Query:   299 VKLGNGEVYEGISINTIDYKGKMFPLIYGGDAPNRTGGYQGSNSRFCSLGSLDEKLVQGK 358
             V LGNG+   GIS+NT +  G  FP++YG +        Q     +CS G +D +LV+GK
Sbjct:   293 VVLGNGKALTGISVNTFNLNGTKFPIVYGQNVSRNCSQAQAG---YCSSGCVDSELVKGK 349

Query:   359 IVLCDELNDGFGAATARAVGSVMQGNDDRDVAYSFPLPNSYLDLYDGSKIASYLNSTSIP 418
             IVLCD+      A  A A+G ++Q     D A+  P P S L   D   I SY+ S   P
Sbjct:   350 IVLCDDFLGYREAYLAGAIGVIVQNTLLPDSAFVVPFPASSLGFEDYKSIKSYIESAEPP 409

Query:   419 TATILKSTAEKNEFAPVVASFSSRGPNPITNDILKPDLTAPGVDILASWTQASSPSE--- 475
              A IL++    +  AP V SFSSRGP+ +  ++LKPD++APG++ILA+++  +SPS    
Sbjct:   410 QAEILRTEEIVDREAPYVPSFSSRGPSFVIQNLLKPDVSAPGLEILAAFSPVASPSSFLN 469

Query:   476 -GDPRISPFNIISGTSMSCPHATAAAAYVKSFYPSWSPAAIKSALMTTATPMSVEANSDA 534
               D R   ++++SGTSM+CPH    AAYVKSF+P WSP+AIKSA+MTTATPM+++ N + 
Sbjct:   470 PEDKRSVRYSVMSGTSMACPHVAGVAAYVKSFHPDWSPSAIKSAIMTTATPMNLKKNPEQ 529

Query:   535 EFAYGSGHLNPSMAVNPGLVYDAGELDYVKFLCGQGYSDKNLSLVTGDNRSCSNSTNATV 594
             EFAYGSG +NP+ A +PGLVY+    DY+K LC +G+    L+  +G N +CS  T   V
Sbjct:   530 EFAYGSGQINPTKASDPGLVYEVETEDYLKMLCAEGFDSTTLTTTSGQNVTCSERTE--V 587

Query:   595 WDLNYPS---FALSTKPGNNTTQVFHRTVTNVGSAVSTYRA-VVYTRPGLMIKVQPSVLY 650
              DLNYP+   F  S  P N T   F RTVTNVG   STY+A VV  +P L I ++P +L 
Sbjct:   588 KDLNYPTMTTFVSSLDPFNVT---FKRTVTNVGFPNSTYKASVVPLQPELQISIEPEILR 644

Query:   651 FKSLYQKQSFVVTVTANVGKSVNMISASLVWDDGVHHVRSPVVAFVAPP 699
             F  L +K+SFVVT++    K  + +S+S+VW DG H VRSP+VA+   P
Sbjct:   645 FGFLEEKKSFVVTISGKELKDGSFVSSSVVWSDGSHSVRSPIVAYSIQP 693
GO:0004252 "serine-type endopeptidase activity" evidence=IEA;IBA
GO:0005576 "extracellular region" evidence=ISM
GO:0005618 "cell wall" evidence=IBA
GO:0006508 "proteolysis" evidence=IEA;ISS
GO:0008152 "metabolic process" evidence=IBA
GO:0042802 "identical protein binding" evidence=IEA
GO:0043086 "negative regulation of catalytic activity" evidence=IEA
GO:0046686 "response to cadmium ion" evidence=IEP
TAIR|locus:2102807 AT3G46850 "AT3G46850" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2153296 AT5G59100 "AT5G59100" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2102792 AT3G46840 "AT3G46840" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2153291 SBT4.12 "AT5G59090" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2168434 SBT4.13 "AT5G59120" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2154528 AT5G58840 "AT5G58840" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2154513 AT5G58830 "AT5G58830" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2154503 AT5G58820 "AT5G58820" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2168444 AT5G59130 "AT5G59130" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q39547CUCM1_CUCME3, ., 4, ., 2, 1, ., 2, 50.56520.97290.9343N/Ano

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.4.210.963

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query702
cd04852307 cd04852, Peptidases_S8_3, Peptidase S8 family doma 1e-102
cd04852307 cd04852, Peptidases_S8_3, Peptidase S8 family doma 5e-31
cd07474295 cd07474, Peptidases_S8_subtilisin_Vpr-like, Peptid 1e-21
cd07474295 cd07474, Peptidases_S8_subtilisin_Vpr-like, Peptid 2e-21
cd02120126 cd02120, PA_subtilisin_like, PA_subtilisin_like: P 6e-18
pfam00082277 pfam00082, Peptidase_S8, Subtilase family 1e-15
cd00306241 cd00306, Peptidases_S8_S53, Peptidase domain in th 1e-15
cd07487264 cd07487, Peptidases_S8_1, Peptidase S8 family doma 3e-15
cd07478455 cd07478, Peptidases_S8_CspA-like, Peptidase S8 fam 9e-13
cd04842293 cd04842, Peptidases_S8_Kp43_protease, Peptidase S8 9e-13
pfam0592276 pfam05922, Inhibitor_I9, Peptidase inhibitor I9 9e-13
cd07477229 cd07477, Peptidases_S8_Subtilisin_subset, Peptidas 1e-12
cd07475346 cd07475, Peptidases_S8_C5a_Peptidase, Peptidase S8 1e-12
cd07489312 cd07489, Peptidases_S8_5, Peptidase S8 family doma 4e-12
cd07477229 cd07477, Peptidases_S8_Subtilisin_subset, Peptidas 1e-11
cd04077255 cd04077, Peptidases_S8_PCSK9_ProteinaseK_like, Pep 2e-11
cd07473259 cd07473, Peptidases_S8_Subtilisin_like, Peptidase 2e-11
cd00306241 cd00306, Peptidases_S8_S53, Peptidase domain in th 4e-11
cd07475346 cd07475, Peptidases_S8_C5a_Peptidase, Peptidase S8 8e-11
cd05562275 cd05562, Peptidases_S53_like, Peptidase domain in 1e-10
cd07490254 cd07490, Peptidases_S8_6, Peptidase S8 family doma 2e-10
cd07490254 cd07490, Peptidases_S8_6, Peptidase S8 family doma 1e-09
cd07487264 cd07487, Peptidases_S8_1, Peptidase S8 family doma 2e-09
cd07481264 cd07481, Peptidases_S8_BacillopeptidaseF-like, Pep 2e-09
cd07489312 cd07489, Peptidases_S8_5, Peptidase S8 family doma 7e-09
cd07473259 cd07473, Peptidases_S8_Subtilisin_like, Peptidase 4e-08
cd04848267 cd04848, Peptidases_S8_Autotransporter_serine_prot 6e-08
cd07482294 cd07482, Peptidases_S8_Lantibiotic_specific_protea 7e-08
pfam00082277 pfam00082, Peptidase_S8, Subtilase family 1e-07
cd07496285 cd07496, Peptidases_S8_13, Peptidase S8 family dom 4e-07
cd07485273 cd07485, Peptidases_S8_Fervidolysin_like, Peptidas 1e-06
cd07484260 cd07484, Peptidases_S8_Thermitase_like, Peptidase 1e-06
TIGR03921350 TIGR03921, T7SS_mycosin, type VII secretion-associ 5e-06
cd07481264 cd07481, Peptidases_S8_BacillopeptidaseF-like, Pep 8e-06
cd07497311 cd07497, Peptidases_S8_14, Peptidase S8 family dom 8e-06
cd07493261 cd07493, Peptidases_S8_9, Peptidase S8 family doma 1e-05
cd04848267 cd04848, Peptidases_S8_Autotransporter_serine_prot 3e-05
COG1404508 COG1404, AprE, Subtilisin-like serine proteases [P 3e-05
cd04077255 cd04077, Peptidases_S8_PCSK9_ProteinaseK_like, Pep 4e-05
cd07483291 cd07483, Peptidases_S8_Subtilisin_Novo-like, Pepti 4e-05
cd04857412 cd04857, Peptidases_S8_Tripeptidyl_Aminopeptidase_ 8e-05
cd04842293 cd04842, Peptidases_S8_Kp43_protease, Peptidase S8 1e-04
cd07498242 cd07498, Peptidases_S8_15, Peptidase S8 family dom 1e-04
cd07484260 cd07484, Peptidases_S8_Thermitase_like, Peptidase 2e-04
cd07480297 cd07480, Peptidases_S8_12, Peptidase S8 family dom 2e-04
cd07480297 cd07480, Peptidases_S8_12, Peptidase S8 family dom 7e-04
cd07478455 cd07478, Peptidases_S8_CspA-like, Peptidase S8 fam 0.002
cd05562275 cd05562, Peptidases_S53_like, Peptidase domain in 0.003
cd05561239 cd05561, Peptidases_S8_4, Peptidase S8 family doma 0.003
cd07476267 cd07476, Peptidases_S8_thiazoline_oxidase_subtilis 0.003
cd04847291 cd04847, Peptidases_S8_Subtilisin_like_2, Peptidas 0.004
>gnl|CDD|173795 cd04852, Peptidases_S8_3, Peptidase S8 family domain, uncharacterized subfamily 3 Back     alignment and domain information 
 Score =  314 bits (807), Expect = e-102
 Identities = 122/237 (51%), Positives = 154/237 (64%), Gaps = 15/237 (6%)

Query: 69  KQLHTTRSWDFMGFSE-----HVKRATTESDIIVGMLDTGIWPESQSFSDENFGPPPKKW 123
            QLHTTRS DF+G         +  A     II+G+LDTGIWPE  SF+D   GP P  W
Sbjct: 1   YQLHTTRSPDFLGLPGAWGGSLLGAANAGEGIIIGVLDTGIWPEHPSFADVGGGPYPHTW 60

Query: 124 KGSCQTSSNFT---CNNKIIGAKFY-----RSDKKFSPFDFKSPRDSEGHGTHTSSTAAG 175
            G C T  +F    CNNK+IGA+++           S  +++SPRD +GHGTHT+STAAG
Sbjct: 61  PGDCVTGEDFNPFSCNNKLIGARYFSDGYDAYGGFNSDGEYRSPRDYDGHGTHTASTAAG 120

Query: 176 GLVSKASLFGIGFGTAIGGVPSARIAVYKICWFD-GCADADILAAFDDAIADGVDIISIS 234
            +V  AS+ G  FGTA G  P ARIAVYK+CW D GC  +DILAA D AIADGVD+IS S
Sbjct: 121 NVVVNASVGGFAFGTASGVAPRARIAVYKVCWPDGGCFGSDILAAIDQAIADGVDVISYS 180

Query: 235 VGSFSAVNYFEDTIAIGSFHAMKKGILTSNSAGNSGPDAASLANVAPWTLSVAASTV 291
           +G   + + +ED IAI   HA++ GI  + SAGNSGP A+++ NVAPW  +VAAST+
Sbjct: 181 IGG-GSPDPYEDPIAIAFLHAVEAGIFVAASAGNSGPGASTVPNVAPWVTTVAASTL 236

This family is a member of the Peptidases S8 or Subtilases serine endo- and exo-peptidase clan. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of subtilases may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values. Length = 307
>gnl|CDD|173795 cd04852, Peptidases_S8_3, Peptidase S8 family domain, uncharacterized subfamily 3 Back     alignment and domain information
>gnl|CDD|173800 cd07474, Peptidases_S8_subtilisin_Vpr-like, Peptidase S8 family domain in Vpr-like proteins Back     alignment and domain information
>gnl|CDD|173800 cd07474, Peptidases_S8_subtilisin_Vpr-like, Peptidase S8 family domain in Vpr-like proteins Back     alignment and domain information
>gnl|CDD|239035 cd02120, PA_subtilisin_like, PA_subtilisin_like: Protease-associated domain containing subtilisin-like proteases Back     alignment and domain information
>gnl|CDD|215701 pfam00082, Peptidase_S8, Subtilase family Back     alignment and domain information
>gnl|CDD|173787 cd00306, Peptidases_S8_S53, Peptidase domain in the S8 and S53 families Back     alignment and domain information
>gnl|CDD|173812 cd07487, Peptidases_S8_1, Peptidase S8 family domain, uncharacterized subfamily 1 Back     alignment and domain information
>gnl|CDD|173804 cd07478, Peptidases_S8_CspA-like, Peptidase S8 family domain in CspA-like proteins Back     alignment and domain information
>gnl|CDD|173791 cd04842, Peptidases_S8_Kp43_protease, Peptidase S8 family domain in Kp43 proteases Back     alignment and domain information
>gnl|CDD|203351 pfam05922, Inhibitor_I9, Peptidase inhibitor I9 Back     alignment and domain information
>gnl|CDD|173803 cd07477, Peptidases_S8_Subtilisin_subset, Peptidase S8 family domain in Subtilisin proteins Back     alignment and domain information
>gnl|CDD|173801 cd07475, Peptidases_S8_C5a_Peptidase, Peptidase S8 family domain in Streptococcal C5a peptidases Back     alignment and domain information
>gnl|CDD|173814 cd07489, Peptidases_S8_5, Peptidase S8 family domain, uncharacterized subfamily 5 Back     alignment and domain information
>gnl|CDD|173803 cd07477, Peptidases_S8_Subtilisin_subset, Peptidase S8 family domain in Subtilisin proteins Back     alignment and domain information
>gnl|CDD|173790 cd04077, Peptidases_S8_PCSK9_ProteinaseK_like, Peptidase S8 family domain in ProteinaseK-like proteins Back     alignment and domain information
>gnl|CDD|173799 cd07473, Peptidases_S8_Subtilisin_like, Peptidase S8 family domain in Subtilisin-like proteins Back     alignment and domain information
>gnl|CDD|173787 cd00306, Peptidases_S8_S53, Peptidase domain in the S8 and S53 families Back     alignment and domain information
>gnl|CDD|173801 cd07475, Peptidases_S8_C5a_Peptidase, Peptidase S8 family domain in Streptococcal C5a peptidases Back     alignment and domain information
>gnl|CDD|173798 cd05562, Peptidases_S53_like, Peptidase domain in the S53 family Back     alignment and domain information
>gnl|CDD|173815 cd07490, Peptidases_S8_6, Peptidase S8 family domain, uncharacterized subfamily 6 Back     alignment and domain information
>gnl|CDD|173815 cd07490, Peptidases_S8_6, Peptidase S8 family domain, uncharacterized subfamily 6 Back     alignment and domain information
>gnl|CDD|173812 cd07487, Peptidases_S8_1, Peptidase S8 family domain, uncharacterized subfamily 1 Back     alignment and domain information
>gnl|CDD|173807 cd07481, Peptidases_S8_BacillopeptidaseF-like, Peptidase S8 family domain in BacillopeptidaseF-like proteins Back     alignment and domain information
>gnl|CDD|173814 cd07489, Peptidases_S8_5, Peptidase S8 family domain, uncharacterized subfamily 5 Back     alignment and domain information
>gnl|CDD|173799 cd07473, Peptidases_S8_Subtilisin_like, Peptidase S8 family domain in Subtilisin-like proteins Back     alignment and domain information
>gnl|CDD|173794 cd04848, Peptidases_S8_Autotransporter_serine_protease_like, Peptidase S8 family domain in Autotransporter serine proteases Back     alignment and domain information
>gnl|CDD|173808 cd07482, Peptidases_S8_Lantibiotic_specific_protease, Peptidase S8 family domain in Lantiobiotic (lanthionine-containing antibiotics) specific proteases Back     alignment and domain information
>gnl|CDD|215701 pfam00082, Peptidase_S8, Subtilase family Back     alignment and domain information
>gnl|CDD|173820 cd07496, Peptidases_S8_13, Peptidase S8 family domain, uncharacterized subfamily 13 Back     alignment and domain information
>gnl|CDD|173811 cd07485, Peptidases_S8_Fervidolysin_like, Peptidase S8 family domain in Fervidolysin Back     alignment and domain information
>gnl|CDD|173810 cd07484, Peptidases_S8_Thermitase_like, Peptidase S8 family domain in Thermitase-like proteins Back     alignment and domain information
>gnl|CDD|234398 TIGR03921, T7SS_mycosin, type VII secretion-associated serine protease mycosin Back     alignment and domain information
>gnl|CDD|173807 cd07481, Peptidases_S8_BacillopeptidaseF-like, Peptidase S8 family domain in BacillopeptidaseF-like proteins Back     alignment and domain information
>gnl|CDD|173821 cd07497, Peptidases_S8_14, Peptidase S8 family domain, uncharacterized subfamily 14 Back     alignment and domain information
>gnl|CDD|173818 cd07493, Peptidases_S8_9, Peptidase S8 family domain, uncharacterized subfamily 9 Back     alignment and domain information
>gnl|CDD|173794 cd04848, Peptidases_S8_Autotransporter_serine_protease_like, Peptidase S8 family domain in Autotransporter serine proteases Back     alignment and domain information
>gnl|CDD|224322 COG1404, AprE, Subtilisin-like serine proteases [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>gnl|CDD|173790 cd04077, Peptidases_S8_PCSK9_ProteinaseK_like, Peptidase S8 family domain in ProteinaseK-like proteins Back     alignment and domain information
>gnl|CDD|173809 cd07483, Peptidases_S8_Subtilisin_Novo-like, Peptidase S8 family domain in Subtilisin_Novo-like proteins Back     alignment and domain information
>gnl|CDD|173796 cd04857, Peptidases_S8_Tripeptidyl_Aminopeptidase_II, Peptidase S8 family domain in Tripeptidyl aminopeptidases_II Back     alignment and domain information
>gnl|CDD|173791 cd04842, Peptidases_S8_Kp43_protease, Peptidase S8 family domain in Kp43 proteases Back     alignment and domain information
>gnl|CDD|173822 cd07498, Peptidases_S8_15, Peptidase S8 family domain, uncharacterized subfamily 15 Back     alignment and domain information
>gnl|CDD|173810 cd07484, Peptidases_S8_Thermitase_like, Peptidase S8 family domain in Thermitase-like proteins Back     alignment and domain information
>gnl|CDD|173806 cd07480, Peptidases_S8_12, Peptidase S8 family domain, uncharacterized subfamily 12 Back     alignment and domain information
>gnl|CDD|173806 cd07480, Peptidases_S8_12, Peptidase S8 family domain, uncharacterized subfamily 12 Back     alignment and domain information
>gnl|CDD|173804 cd07478, Peptidases_S8_CspA-like, Peptidase S8 family domain in CspA-like proteins Back     alignment and domain information
>gnl|CDD|173798 cd05562, Peptidases_S53_like, Peptidase domain in the S53 family Back     alignment and domain information
>gnl|CDD|173797 cd05561, Peptidases_S8_4, Peptidase S8 family domain, uncharacterized subfamily 4 Back     alignment and domain information
>gnl|CDD|173802 cd07476, Peptidases_S8_thiazoline_oxidase_subtilisin-like_protease, Peptidase S8 family domain in Thiazoline oxidase/subtilisin-like proteases Back     alignment and domain information
>gnl|CDD|173793 cd04847, Peptidases_S8_Subtilisin_like_2, Peptidase S8 family domain in Subtilisin-like proteins Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 702
cd04852307 Peptidases_S8_3 Peptidase S8 family domain, unchar 100.0
cd07478455 Peptidases_S8_CspA-like Peptidase S8 family domain 100.0
PTZ00262639 subtilisin-like protease; Provisional 100.0
cd07479255 Peptidases_S8_SKI-1_like Peptidase S8 family domai 100.0
cd05562275 Peptidases_S53_like Peptidase domain in the S53 fa 100.0
cd07475346 Peptidases_S8_C5a_Peptidase Peptidase S8 family do 100.0
cd07497311 Peptidases_S8_14 Peptidase S8 family domain, uncha 100.0
cd07489312 Peptidases_S8_5 Peptidase S8 family domain, unchar 100.0
cd07476267 Peptidases_S8_thiazoline_oxidase_subtilisin-like_p 100.0
cd07474295 Peptidases_S8_subtilisin_Vpr-like Peptidase S8 fam 100.0
cd05561239 Peptidases_S8_4 Peptidase S8 family domain, unchar 100.0
cd07483291 Peptidases_S8_Subtilisin_Novo-like Peptidase S8 fa 100.0
cd07493261 Peptidases_S8_9 Peptidase S8 family domain, unchar 100.0
cd04857412 Peptidases_S8_Tripeptidyl_Aminopeptidase_II Peptid 100.0
cd07481264 Peptidases_S8_BacillopeptidaseF-like Peptidase S8 100.0
cd07487264 Peptidases_S8_1 Peptidase S8 family domain, unchar 100.0
cd07485273 Peptidases_S8_Fervidolysin_like Peptidase S8 famil 100.0
cd07484260 Peptidases_S8_Thermitase_like Peptidase S8 family 100.0
cd07494298 Peptidases_S8_10 Peptidase S8 family domain, uncha 100.0
cd04847291 Peptidases_S8_Subtilisin_like_2 Peptidase S8 famil 100.0
cd07490254 Peptidases_S8_6 Peptidase S8 family domain, unchar 100.0
cd04077255 Peptidases_S8_PCSK9_ProteinaseK_like Peptidase S8 100.0
cd07496285 Peptidases_S8_13 Peptidase S8 family domain, uncha 100.0
cd04842293 Peptidases_S8_Kp43_protease Peptidase S8 family do 100.0
cd07498242 Peptidases_S8_15 Peptidase S8 family domain, uncha 100.0
cd07480297 Peptidases_S8_12 Peptidase S8 family domain, uncha 100.0
cd04843277 Peptidases_S8_11 Peptidase S8 family domain, uncha 100.0
cd07473259 Peptidases_S8_Subtilisin_like Peptidase S8 family 100.0
cd07477229 Peptidases_S8_Subtilisin_subset Peptidase S8 famil 100.0
PF00082282 Peptidase_S8: Subtilase family This is family S8 i 100.0
cd07491247 Peptidases_S8_7 Peptidase S8 family domain, unchar 100.0
cd07482294 Peptidases_S8_Lantibiotic_specific_protease Peptid 100.0
cd04059297 Peptidases_S8_Protein_convertases_Kexins_Furin-lik 100.0
cd07492222 Peptidases_S8_8 Peptidase S8 family domain, unchar 100.0
KOG1153501 consensus Subtilisin-related protease/Vacuolar pro 100.0
cd04848267 Peptidases_S8_Autotransporter_serine_protease_like 100.0
KOG4266 1033 consensus Subtilisin kexin isozyme-1/site 1 protea 100.0
cd07488247 Peptidases_S8_2 Peptidase S8 family domain, unchar 100.0
KOG1114 1304 consensus Tripeptidyl peptidase II [Posttranslatio 100.0
cd00306241 Peptidases_S8_S53 Peptidase domain in the S8 and S 99.98
COG1404508 AprE Subtilisin-like serine proteases [Posttransla 99.92
KOG3526629 consensus Subtilisin-like proprotein convertase [P 99.81
cd04056361 Peptidases_S53 Peptidase domain in the S53 family. 99.72
cd02120126 PA_subtilisin_like PA_subtilisin_like: Protease-as 99.07
cd02133143 PA_C5a_like PA_C5a_like: Protease-associated domai 98.95
COG4934 1174 Predicted protease [Posttranslational modification 98.47
PF06280112 DUF1034: Fn3-like domain (DUF1034); InterPro: IPR0 98.31
KOG3525431 consensus Subtilisin-like proprotein convertase [P 98.31
cd04816122 PA_SaNapH_like PA_SaNapH_like: Protease-associated 98.3
PF0592282 Inhibitor_I9: Peptidase inhibitor I9; InterPro: IP 98.26
cd02130122 PA_ScAPY_like PA_ScAPY_like: Protease-associated d 98.19
cd04818118 PA_subtilisin_1 PA_subtilisin_1: Protease-associat 98.16
cd02122138 PA_GRAIL_like PA _GRAIL_like: Protease-associated 98.12
PF02225101 PA: PA domain; InterPro: IPR003137 The PA (Proteas 98.1
cd02124129 PA_PoS1_like PA_PoS1_like: Protease-associated (PA 98.08
cd00538126 PA PA: Protease-associated (PA) domain. The PA dom 98.05
cd02127118 PA_hPAP21_like PA_hPAP21_like: Protease-associated 98.04
cd02129120 PA_hSPPL_like PA_hSPPL_like: Protease-associated d 97.99
cd02126126 PA_EDEM3_like PA_EDEM3_like: protease associated d 97.94
cd02132139 PA_GO-like PA_GO-like: Protease-associated domain 97.8
cd04813117 PA_1 PA_1: Protease-associated (PA) domain subgrou 97.79
cd02125127 PA_VSR PA_VSR: Protease-associated (PA) domain-con 97.76
cd04817139 PA_VapT_like PA_VapT_like: Protease-associated dom 97.65
cd02123153 PA_C_RZF_like PA_C-RZF_ like: Protease-associated 97.52
cd04819127 PA_2 PA_2: Protease-associated (PA) domain subgrou 97.49
PF14874102 PapD-like: Flagellar-associated PapD-like 96.19
cd04815134 PA_M28_2 PA_M28_2: Protease-associated (PA) domain 96.06
PF1063378 NPCBM_assoc: NPCBM-associated, NEW3 domain of alph 94.84
cd04822151 PA_M28_1_3 PA_M28_1_3: Protease-associated (PA) do 94.65
cd04820137 PA_M28_1_1 PA_M28_1_1: Protease-associated (PA) do 94.64
cd02128183 PA_TfR PA_TfR: Protease-associated domain containi 94.29
cd04814142 PA_M28_1 PA_M28_1: Protease-associated (PA) domain 94.05
PF11614118 FixG_C: IG-like fold at C-terminal of FixG, putati 92.93
KOG2442541 consensus Uncharacterized conserved protein, conta 90.27
KOG1114 1304 consensus Tripeptidyl peptidase II [Posttranslatio 88.77
PF06030121 DUF916: Bacterial protein of unknown function (DUF 88.52
cd02131153 PA_hNAALADL2_like PA_hNAALADL2_like: Protease-asso 88.08
COG1470513 Predicted membrane protein [Function unknown] 87.16
cd02121220 PA_GCPII_like PA_GCPII_like: Protease-associated d 86.58
PF00345122 PapD_N: Pili and flagellar-assembly chaperone, Pap 82.66
KOG4628348 consensus Predicted E3 ubiquitin ligase [Posttrans 80.06
>cd04852 Peptidases_S8_3 Peptidase S8 family domain, uncharacterized subfamily 3 Back     alignment and domain information 
Probab=100.00  E-value=2.6e-52  Score=443.08  Aligned_cols=293  Identities=57%  Similarity=0.930  Sum_probs=251.4

Q ss_pred             eccccCCCccccCchhhccc-----CCCCCCcEEEEeccCCCCCCCCCCCCCCCCCCCCccccccCCCCc---ccCceeE
Q 043420           69 KQLHTTRSWDFMGFSEHVKR-----ATTESDIIVGMLDTGIWPESQSFSDENFGPPPKKWKGSCQTSSNF---TCNNKII  140 (702)
Q Consensus        69 ~~~~~~~s~~~~g~~~~w~~-----~~~G~gV~VgVIDtGid~~Hp~f~d~~~~~~~~~w~g~~~~~~~~---~~n~kii  140 (702)
                      ++++++++++|+|++.+|+.     +++|+||+|||||||||++||+|.+.+..+.+..|.+.|+.+..+   .|++|++
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~gv~VaViDtGid~~hp~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~   80 (307)
T cd04852           1 YQLHTTRSPDFLGLPGAWGGSLLGAANAGEGIIIGVLDTGIWPEHPSFADVGGGPYPHTWPGDCVTGEDFNPFSCNNKLI   80 (307)
T ss_pred             CCccccCCHHHcCCCCCCCcccccccCCCCccEEEEEeCCCCCCCcCcccCCCCCCCCCCCCcccCCCCcCccCcCCeEE
Confidence            47899999999999987775     999999999999999999999999988889999999999988777   4999999


Q ss_pred             eeeecccCCC-----CCCCCCCCCCCCCCChhHHHHHhccCCCCCCcccccccceeeecccCCeEEEEEEecCC-CCCHH
Q 043420          141 GAKFYRSDKK-----FSPFDFKSPRDSEGHGTHTSSTAAGGLVSKASLFGIGFGTAIGGVPSARIAVYKICWFD-GCADA  214 (702)
Q Consensus       141 g~~~~~~~~~-----~~~~~~~~~~D~~gHGThVAgiaaG~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~-g~~~~  214 (702)
                      +.++|..+..     .......++.|..||||||||||||+...+....|...+.+.||||+|+|+.+|+++.. .+..+
T Consensus        81 g~~~~~~~~~~~~~~~~~~~~~~~~d~~gHGT~VAgiiag~~~~~~~~~~~~~~~~~GvAP~a~l~~~kv~~~~~~~~~~  160 (307)
T cd04852          81 GARYFSDGYDAYGGFNSDGEYRSPRDYDGHGTHTASTAAGNVVVNASVGGFAFGTASGVAPRARIAVYKVCWPDGGCFGS  160 (307)
T ss_pred             EEEEcccchhhccCcccccCCCCCccCCCCchhhhhhhcCCCcccccccccccccEEEECCCCeEEEEEEecCCCCccHH
Confidence            9999983221     11223566788999999999999999877666666667778999999999999999984 48899


Q ss_pred             HHHHHHHHHHHCCCCEEEEeecCCCCCCCccCHHHHHHHHHHhCCCEEEEccCCCCCCCCCcCCCCCceEEeeeeccCcc
Q 043420          215 DILAAFDDAIADGVDIISISVGSFSAVNYFEDTIAIGSFHAMKKGILTSNSAGNSGPDAASLANVAPWTLSVAASTVDRK  294 (702)
Q Consensus       215 ~i~~ai~~A~~~gvdVIn~SlG~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~~~~~~~a~~vitVgA~~~~~~  294 (702)
                      ++++||++|+++|++|||||||.... ....+.+..++..+.++|++||+||||+|+.....++..||+++|||++    
T Consensus       161 ~~~~ai~~a~~~g~~Vin~S~G~~~~-~~~~~~~~~~~~~a~~~gilvV~aAGN~g~~~~~~~~~~~~vi~Vga~~----  235 (307)
T cd04852         161 DILAAIDQAIADGVDVISYSIGGGSP-DPYEDPIAIAFLHAVEAGIFVAASAGNSGPGASTVPNVAPWVTTVAAST----  235 (307)
T ss_pred             HHHHHHHHHHHcCCCEEEeCCCCCCC-CcccCHHHHHHHHHHhCCCEEEEECCCCCCCCCcccCCCCCeEEEEecc----
Confidence            99999999999999999999999832 4556788888889999999999999999988878888899999998731    


Q ss_pred             eeeEEEeCCCeEEeeEeecccCCCCceeeEEEcCCCCCCCCCCCCCCCCccCCCCCCccCcCCeEEEEeecchhhhhhhc
Q 043420          295 FVTRVKLGNGEVYEGISINTIDYKGKMFPLIYGGDAPNRTGGYQGSNSRFCSLGSLDEKLVQGKIVLCDELNDGFGAATA  374 (702)
Q Consensus       295 ~~~~~~~~~g~~~~g~~~~~~~~~~~~~~lv~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~~~~~~~~~~a  374 (702)
                                                                                                      
T Consensus       236 --------------------------------------------------------------------------------  235 (307)
T cd04852         236 --------------------------------------------------------------------------------  235 (307)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CceEEEEeeCCCCCCCcccCcceEEecchhHHHHHHHHhcCCCcEEEEeccccccccCCCcccccCCCCCCCCCCCCCCC
Q 043420          375 RAVGSVMQGNDDRDVAYSFPLPNSYLDLYDGSKIASYLNSTSIPTATILKSTAEKNEFAPVVASFSSRGPNPITNDILKP  454 (702)
Q Consensus       375 Ga~g~i~~~~~~~~~~~~~~~p~~~i~~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~a~fSS~Gp~~~~~~~lKP  454 (702)
                                                                                                   +||
T Consensus       236 -----------------------------------------------------------------------------~~~  238 (307)
T cd04852         236 -----------------------------------------------------------------------------LKP  238 (307)
T ss_pred             -----------------------------------------------------------------------------Ccc
Confidence                                                                                         477


Q ss_pred             cEEeCCCcEEeeccCCCCCCCCCCCCCCceEeccccchhHHHHHHHHHHHHhCCCCCHHHHHHHHHhcCc
Q 043420          455 DLTAPGVDILASWTQASSPSEGDPRISPFNIISGTSMSCPHATAAAAYVKSFYPSWSPAAIKSALMTTAT  524 (702)
Q Consensus       455 DI~APG~~I~sa~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~P~lsp~~ik~~L~~TA~  524 (702)
                      ||+|||++|++++....... .......|..++|||||||+|||++|||+|++|+|+|.+||++|++||+
T Consensus       239 di~apG~~i~~~~~~~~~~~-~~~~~~~~~~~sGTS~AaP~vaG~aALl~~~~p~~t~~~v~~~L~~tA~  307 (307)
T cd04852         239 DIAAPGVDILAAWTPEGADP-GDARGEDFAFISGTSMASPHVAGVAALLKSAHPDWSPAAIKSALMTTAY  307 (307)
T ss_pred             ceeeccCceeecccCccccc-cCCCCCcEEEeCcHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHhcC
Confidence            99999999999986431111 2233457999999999999999999999999999999999999999984

This family is a member of the Peptidases S8 or Subtilases serine endo- and exo-peptidase clan. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of subtilases may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values.
>cd07478 Peptidases_S8_CspA-like Peptidase S8 family domain in CspA-like proteins Back     alignment and domain information
>PTZ00262 subtilisin-like protease; Provisional Back     alignment and domain information
>cd07479 Peptidases_S8_SKI-1_like Peptidase S8 family domain in SKI-1-like proteins Back     alignment and domain information
>cd05562 Peptidases_S53_like Peptidase domain in the S53 family Back     alignment and domain information
>cd07475 Peptidases_S8_C5a_Peptidase Peptidase S8 family domain in Streptococcal C5a peptidases Back     alignment and domain information
>cd07497 Peptidases_S8_14 Peptidase S8 family domain, uncharacterized subfamily 14 Back     alignment and domain information
>cd07489 Peptidases_S8_5 Peptidase S8 family domain, uncharacterized subfamily 5 Back     alignment and domain information
>cd07476 Peptidases_S8_thiazoline_oxidase_subtilisin-like_protease Peptidase S8 family domain in Thiazoline oxidase/subtilisin-like proteases Back     alignment and domain information
>cd07474 Peptidases_S8_subtilisin_Vpr-like Peptidase S8 family domain in Vpr-like proteins Back     alignment and domain information
>cd05561 Peptidases_S8_4 Peptidase S8 family domain, uncharacterized subfamily 4 Back     alignment and domain information
>cd07483 Peptidases_S8_Subtilisin_Novo-like Peptidase S8 family domain in Subtilisin_Novo-like proteins Back     alignment and domain information
>cd07493 Peptidases_S8_9 Peptidase S8 family domain, uncharacterized subfamily 9 Back     alignment and domain information
>cd04857 Peptidases_S8_Tripeptidyl_Aminopeptidase_II Peptidase S8 family domain in Tripeptidyl aminopeptidases_II Back     alignment and domain information
>cd07481 Peptidases_S8_BacillopeptidaseF-like Peptidase S8 family domain in BacillopeptidaseF-like proteins Back     alignment and domain information
>cd07487 Peptidases_S8_1 Peptidase S8 family domain, uncharacterized subfamily 1 Back     alignment and domain information
>cd07485 Peptidases_S8_Fervidolysin_like Peptidase S8 family domain in Fervidolysin Back     alignment and domain information
>cd07484 Peptidases_S8_Thermitase_like Peptidase S8 family domain in Thermitase-like proteins Back     alignment and domain information
>cd07494 Peptidases_S8_10 Peptidase S8 family domain, uncharacterized subfamily 10 Back     alignment and domain information
>cd04847 Peptidases_S8_Subtilisin_like_2 Peptidase S8 family domain in Subtilisin-like proteins Back     alignment and domain information
>cd07490 Peptidases_S8_6 Peptidase S8 family domain, uncharacterized subfamily 6 Back     alignment and domain information
>cd04077 Peptidases_S8_PCSK9_ProteinaseK_like Peptidase S8 family domain in ProteinaseK-like proteins Back     alignment and domain information
>cd07496 Peptidases_S8_13 Peptidase S8 family domain, uncharacterized subfamily 13 Back     alignment and domain information
>cd04842 Peptidases_S8_Kp43_protease Peptidase S8 family domain in Kp43 proteases Back     alignment and domain information
>cd07498 Peptidases_S8_15 Peptidase S8 family domain, uncharacterized subfamily 15 Back     alignment and domain information
>cd07480 Peptidases_S8_12 Peptidase S8 family domain, uncharacterized subfamily 12 Back     alignment and domain information
>cd04843 Peptidases_S8_11 Peptidase S8 family domain, uncharacterized subfamily 11 Back     alignment and domain information
>cd07473 Peptidases_S8_Subtilisin_like Peptidase S8 family domain in Subtilisin-like proteins Back     alignment and domain information
>cd07477 Peptidases_S8_Subtilisin_subset Peptidase S8 family domain in Subtilisin proteins Back     alignment and domain information
>PF00082 Peptidase_S8: Subtilase family This is family S8 in the peptidase classification Back     alignment and domain information
>cd07491 Peptidases_S8_7 Peptidase S8 family domain, uncharacterized subfamily 7 Back     alignment and domain information
>cd07482 Peptidases_S8_Lantibiotic_specific_protease Peptidase S8 family domain in Lantiobiotic (lanthionine-containing antibiotics) specific proteases Back     alignment and domain information
>cd04059 Peptidases_S8_Protein_convertases_Kexins_Furin-like Peptidase S8 family domain in Protein convertases Back     alignment and domain information
>cd07492 Peptidases_S8_8 Peptidase S8 family domain, uncharacterized subfamily 8 Back     alignment and domain information
>KOG1153 consensus Subtilisin-related protease/Vacuolar protease B [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>cd04848 Peptidases_S8_Autotransporter_serine_protease_like Peptidase S8 family domain in Autotransporter serine proteases Back     alignment and domain information
>KOG4266 consensus Subtilisin kexin isozyme-1/site 1 protease, subtilase superfamily [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>cd07488 Peptidases_S8_2 Peptidase S8 family domain, uncharacterized subfamily 2 Back     alignment and domain information
>KOG1114 consensus Tripeptidyl peptidase II [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>cd00306 Peptidases_S8_S53 Peptidase domain in the S8 and S53 families Back     alignment and domain information
>COG1404 AprE Subtilisin-like serine proteases [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>KOG3526 consensus Subtilisin-like proprotein convertase [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>cd04056 Peptidases_S53 Peptidase domain in the S53 family Back     alignment and domain information
>cd02120 PA_subtilisin_like PA_subtilisin_like: Protease-associated domain containing subtilisin-like proteases Back     alignment and domain information
>cd02133 PA_C5a_like PA_C5a_like: Protease-associated domain containing proteins like Streptococcus pyogenes C5a peptidase Back     alignment and domain information
>COG4934 Predicted protease [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PF06280 DUF1034: Fn3-like domain (DUF1034); InterPro: IPR010435 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families Back     alignment and domain information
>KOG3525 consensus Subtilisin-like proprotein convertase [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>cd04816 PA_SaNapH_like PA_SaNapH_like: Protease-associated domain containing proteins like Streptomyces anulatus N-acetylpuromycin N-acetylhydrolase (SaNapH) Back     alignment and domain information
>PF05922 Inhibitor_I9: Peptidase inhibitor I9; InterPro: IPR010259 Peptide proteinase inhibitors can be found as single domain proteins or as single or multiple domains within proteins; these are referred to as either simple or compound inhibitors, respectively Back     alignment and domain information
>cd02130 PA_ScAPY_like PA_ScAPY_like: Protease-associated domain containing proteins like Saccharomyces cerevisiae aminopeptidase Y (ScAPY) Back     alignment and domain information
>cd04818 PA_subtilisin_1 PA_subtilisin_1: Protease-associated domain containing subtilisin-like proteases, subgroup 1 Back     alignment and domain information
>cd02122 PA_GRAIL_like PA _GRAIL_like: Protease-associated (PA) domain GRAIL-like Back     alignment and domain information
>PF02225 PA: PA domain; InterPro: IPR003137 The PA (Protease associated) domain is found as an insert domain in diverse proteases, which include the MEROPS peptidase families A22B, M28, and S8A [] Back     alignment and domain information
>cd02124 PA_PoS1_like PA_PoS1_like: Protease-associated (PA) domain PoS1-like Back     alignment and domain information
>cd00538 PA PA: Protease-associated (PA) domain Back     alignment and domain information
>cd02127 PA_hPAP21_like PA_hPAP21_like: Protease-associated domain containing proteins like the human secreted glycoprotein hPAP21 (human protease-associated domain-containing protein, 21kDa) Back     alignment and domain information
>cd02129 PA_hSPPL_like PA_hSPPL_like: Protease-associated domain containing human signal peptide peptidase-like (hSPPL)-like Back     alignment and domain information
>cd02126 PA_EDEM3_like PA_EDEM3_like: protease associated domain (PA) domain-containing EDEM3-like proteins Back     alignment and domain information
>cd02132 PA_GO-like PA_GO-like: Protease-associated domain containing proteins like Arabidopsis thaliana growth-on protein GRO10 Back     alignment and domain information
>cd04813 PA_1 PA_1: Protease-associated (PA) domain subgroup 1 Back     alignment and domain information
>cd02125 PA_VSR PA_VSR: Protease-associated (PA) domain-containing plant vacuolar sorting receptor (VSR) Back     alignment and domain information
>cd04817 PA_VapT_like PA_VapT_like: Protease-associated domain containing proteins like VapT from Vibrio metschnikovii strain RH530 Back     alignment and domain information
>cd02123 PA_C_RZF_like PA_C-RZF_ like: Protease-associated (PA) domain C_RZF-like Back     alignment and domain information
>cd04819 PA_2 PA_2: Protease-associated (PA) domain subgroup 2 Back     alignment and domain information
>PF14874 PapD-like: Flagellar-associated PapD-like Back     alignment and domain information
>cd04815 PA_M28_2 PA_M28_2: Protease-associated (PA) domain, peptidase family M28, subfamily-2 Back     alignment and domain information
>PF10633 NPCBM_assoc: NPCBM-associated, NEW3 domain of alpha-galactosidase; InterPro: IPR018905 This domain has been named NEW3, but its function is not known Back     alignment and domain information
>cd04822 PA_M28_1_3 PA_M28_1_3: Protease-associated (PA) domain, peptidase family M28, subfamily-1, subgroup 3 Back     alignment and domain information
>cd04820 PA_M28_1_1 PA_M28_1_1: Protease-associated (PA) domain, peptidase family M28, subfamily-1, subgroup 1 Back     alignment and domain information
>cd02128 PA_TfR PA_TfR: Protease-associated domain containing proteins like transferrin receptor (TfR) Back     alignment and domain information
>cd04814 PA_M28_1 PA_M28_1: Protease-associated (PA) domain, peptidase family M28, subfamily-1 Back     alignment and domain information
>PF11614 FixG_C: IG-like fold at C-terminal of FixG, putative oxidoreductase; PDB: 2R39_A Back     alignment and domain information
>KOG2442 consensus Uncharacterized conserved protein, contains PA domain [General function prediction only] Back     alignment and domain information
>KOG1114 consensus Tripeptidyl peptidase II [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PF06030 DUF916: Bacterial protein of unknown function (DUF916); InterPro: IPR010317 This family consists of putative cell surface proteins, from Firmicutes, of unknown function Back     alignment and domain information
>cd02131 PA_hNAALADL2_like PA_hNAALADL2_like: Protease-associated domain containing proteins like human N-acetylated alpha-linked acidic dipeptidase-like 2 protein (hNAALADL2) Back     alignment and domain information
>COG1470 Predicted membrane protein [Function unknown] Back     alignment and domain information
>cd02121 PA_GCPII_like PA_GCPII_like: Protease-associated domain containing protein, glutamate carboxypeptidase II (GCPII)-like Back     alignment and domain information
>PF00345 PapD_N: Pili and flagellar-assembly chaperone, PapD N-terminal domain; InterPro: IPR016147 Most Gram-negative bacteria possess a supramolecular structure - the pili - on their surface, which mediates attachment to specific receptors Back     alignment and domain information
>KOG4628 consensus Predicted E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query702
3vta_A621 Crystal Structure Of Cucumisin, A Subtilisin-Like E 0.0
3i6s_A649 Crystal Structure Of The Plant Subtilisin-Like Prot 5e-92
3afg_A539 Crystal Structure Of Pron-Tk-Sp From Thermococcus K 9e-13
3eif_A 936 1.9 Angstrom Crystal Structure Of The Active Form O 2e-09
3f49_S266 Anion-Triggered Engineered Subtilisin Subt_bacam Le 9e-06
1c9j_A269 Bacillus Lentus Subtilisin K27rN87SV104YN123ST274A 1e-05
1st3_A269 The Crystal Structure Of The Bacillus Lentus Alkali 2e-05
1ah2_A269 Serine Protease Pb92 From Bacillus Alcalophilus, Nm 2e-05
1ndu_A269 Bacillus Lentus Subtilisin Variant S101gV104N Lengt 2e-05
1ndq_A269 Bacillus Lentus Subtilisin Length = 269 2e-05
2sni_E275 Structural Comparison Of Two Serine Proteinase-Prot 2e-05
2sbt_A275 A Comparison Of The Three-Dimensional Structures Of 2e-05
3cnq_S266 Prosubtilisin Substrate Complex Of Subtilisin Subt_ 2e-05
1ak9_A275 Subtilisin Mutant 8321 Length = 275 2e-05
3lpc_A340 Crystal Structure Of A Subtilisin-Like Protease Len 2e-05
3lpa_A340 Crystal Structure Of A Subtilisin-Like Protease Len 3e-05
1lw6_E281 Crystal Structure Of The Complex Of Subtilisin Bpn' 3e-05
3lpd_A339 Crystal Structure Of A Subtilisin-Like Protease Len 3e-05
2sic_E275 Refined Crystal Structure Of The Complex Of Subtili 3e-05
1s02_A275 Effects Of Engineered Salt Bridges On The Stability 3e-05
1c9n_A269 Bacillus Lentus Substilisin Variant (Ser 87) K27rV1 3e-05
1sub_A275 Calcium-Independent Subtilisin By Design Length = 2 3e-05
1dui_A266 Subtilisin Bpn' From Bacillus Amyloliquefaciens, Cr 4e-05
1a2q_A275 Subtilisin Bpn' Mutant 7186 Length = 275 4e-05
1iav_A269 Structure On Native (Asn 87) Subtilisin From Bacill 4e-05
1suc_A275 Calcium-Independent Subtilisin By Design Length = 2 4e-05
1sbi_A275 Subtilisin Bpn' 8397 (E.C. 3.4.21.14) Mutant (M50f, 5e-05
1q5p_A269 S156e/s166d Variant Of Bacillus Lentus Subtilisin L 5e-05
1sue_A266 Subtilisin Bpn' From Bacillus Amyloliquefaciens, Mu 5e-05
1c9m_A269 Bacillus Lentus Subtilsin (Ser 87) N76dS103AV104I L 5e-05
1wsd_A269 Alkaline M-Protease Form I Crystal Strcuture Length 5e-05
1s01_A275 Large Increases In General Stability For Subtilisin 5e-05
1aqn_A275 Subtilisin Mutant 8324 Length = 275 6e-05
1sua_A266 Subtilisin Bpn' Length = 266 6e-05
1spb_S266 Subtilisin Bpn' Prosegment (77 Residues) Complexed 6e-05
1ubn_A275 Selenosubtilisin Bpn Length = 275 7e-05
1v5i_A275 Crystal Structure Of Serine Protease Inhibitor Poia 8e-05
1mee_A275 The Complex Between The Subtilisin From A Mesophili 8e-05
1yjb_A275 Subtilisin Bpn' 8397+1 (E.C. 3.4.21.14) (Mutant Wit 9e-05
1bh6_A274 Subtilisin Dy In Complex With The Synthetic Inhibit 1e-04
1gnv_A266 Calcium Independent Subtilisin Bpn' Mutant Length = 1e-04
1gns_A263 Subtilisin Bpn' Length = 263 2e-04
1st2_A275 The Three-Dimensional Structure Of Bacillus Amyloli 2e-04
4dww_A275 Crystal Structure Of Nattokinase From Bacillus Subt 4e-04
1scj_A275 Crystal Structure Of Subtilisin-Propeptide Complex 4e-04
2b6n_A278 The 1.8 A Crystal Structure Of A Proteinase K Like 5e-04
1xf1_A 926 Structure Of C5a Peptidase- A Key Virulence Factor 9e-04
>pdb|3VTA|A Chain A, Crystal Structure Of Cucumisin, A Subtilisin-Like Endoprotease From Cucumis Melo L Length = 621 Back     alignment and structure 
Iteration: 1

 Score =  669 bits (1725), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 348/624 (55%), Positives = 436/624 (69%), Gaps = 13/624 (2%)
Query: 73  TTRSWDFMGFSEHV-KRATTESDIIVGMLDTGIWPESQSFSDENFGPPPKKWKGSCQTSS 131
           TTRSWDF+GF   V +R+  ES+I+VG+LDTGIWPES SF DE F PPP KWKG+C+TS+
Sbjct: 1   TTRSWDFLGFPLTVPRRSQVESNIVVGVLDTGIWPESPSFDDEGFSPPPPKWKGTCETSN 60
Query: 132 NFTCNNKIIGAKFYRSDKKFSPFDFKSPRDSEGHGTHTSSTAAGGLVSKASLFGIGFGTA 191
           NF CN KIIGA+ Y   +  SP D   PRD+ GHGTHT+STAAGGLVS+A+L+G+G GTA
Sbjct: 61  NFRCNRKIIGARSYHIGRPISPGDVNGPRDTNGHGTHTASTAAGGLVSQANLYGLGLGTA 120
Query: 192 IGGVPSARIAVYKICWFDGCXXXXXXXXXXXXXXXGVDIISISVGSFSAVNYFEDTIAIG 251
            GGVP ARIA YK+CW DGC               GVDIIS+SVG  +  +YF D IAIG
Sbjct: 121 RGGVPLARIAAYKVCWNDGCSDTDILAAYDDAIADGVDIISLSVGGANPRHYFVDAIAIG 180
Query: 252 SFHAMKKGILTSNSAGNSGPDAASLANVAPWTLSVAASTVDRKFVTRVKLGNGEVYEGIS 311
           SFHA+++GILTSNSAGN GP+  + A+++PW LSVAAST+DRKFVT+V++GNG+ ++G+S
Sbjct: 181 SFHAVERGILTSNSAGNGGPNFFTTASLSPWLLSVAASTMDRKFVTQVQIGNGQSFQGVS 240
Query: 312 INTIDYKGKMFPLIYGGDAPNRTGGYQGSNSRFCSLGSLDEKLVQGKIVLCDELNDG--- 368
           INT D   + +PL+ G D PN   G+  S SRFC+  S++  L++GKIV+C E + G   
Sbjct: 241 INTFD--NQYYPLVSGRDIPNT--GFDKSTSRFCTDKSVNPNLLKGKIVVC-EASFGPHE 295
Query: 369 FGAATARAVGSVMQGNDDRDVAYSFPLPNSYLDLYDGSKIASYLNSTSIPTATILKSTAE 428
           F  +   A G +M  N  RD A S+PLP+S LD  D      Y+ S   P ATI KST  
Sbjct: 296 FFKSLDGAAGVLMTSN-TRDYADSYPLPSSVLDPNDLLATLRYIYSIRSPGATIFKSTTI 354
Query: 429 KNEFAPVVASFSSRGPNPITNDILKPDLTAPGVDILASWTQASSPSEGDPRISPFNIISG 488
            N  APVV SFSSRGPN  T D++KPD++ PGV+ILA+W    +P  G  R + FNIISG
Sbjct: 355 LNASAPVVVSFSSRGPNRATKDVIKPDISGPGVEILAAWPSV-APVGGIRRNTLFNIISG 413
Query: 489 TSMSCPHATAAAAYVKSFYPSWSPAAIKSALMTTATPMSVEANSDAEFAYGSGHLNPSMA 548
           TSMSCPH T  A YVK++ P+WSPAAIKSALMTTA+PM+   N  AEFAYGSGH+NP  A
Sbjct: 414 TSMSCPHITGIATYVKTYNPTWSPAAIKSALMTTASPMNARFNPQAEFAYGSGHVNPLKA 473
Query: 549 VNPGLVYDAGELDYVKFLCGQGYSDKNLSLVTGDNRSCSNSTNATVWDLNYPSFALSTKP 608
           V PGLVYDA E DYVKFLCGQGY+ + +  +TGD  +C++     VWDLNYPSF LS  P
Sbjct: 474 VRPGLVYDANESDYVKFLCGQGYNTQAVRRITGDYSACTSGNTGRVWDLNYPSFGLSVSP 533
Query: 609 GNNTTQVFHRTVTNVGSAVSTYRAVVYTRPGLMIKVQPSVLYFKSLYQKQSFVVTVTANV 668
                Q F+RT+T+V    STYRA++    GL I V P+VL F  L  ++SF +TV  ++
Sbjct: 534 SQTFNQYFNRTLTSVAPQASTYRAMISAPQGLTISVNPNVLSFNGLGDRKSFTLTVRGSI 593
Query: 669 GKSVNMISASLVWDDGVHHVRSPV 692
              V  +SASLVW DGVH+VRSP+
Sbjct: 594 KGFV--VSASLVWSDGVHYVRSPI 615
>pdb|3I6S|A Chain A, Crystal Structure Of The Plant Subtilisin-Like Protease Sbt3 Length = 649 Back     alignment and structure
>pdb|3AFG|A Chain A, Crystal Structure Of Pron-Tk-Sp From Thermococcus Kodakaraensis Length = 539 Back     alignment and structure
>pdb|3EIF|A Chain A, 1.9 Angstrom Crystal Structure Of The Active Form Of The C5a Peptidase From Streptococcus Pyogenes (Scpa) Length = 936 Back     alignment and structure
>pdb|3F49|S Chain S, Anion-Triggered Engineered Subtilisin Subt_bacam Length = 266 Back     alignment and structure
>pdb|1C9J|A Chain A, Bacillus Lentus Subtilisin K27rN87SV104YN123ST274A Variant Length = 269 Back     alignment and structure
>pdb|1ST3|A Chain A, The Crystal Structure Of The Bacillus Lentus Alkaline Protease, Subtilisin Bl, At 1.4 Angstroms Resolution Length = 269 Back     alignment and structure
>pdb|1AH2|A Chain A, Serine Protease Pb92 From Bacillus Alcalophilus, Nmr, 18 Structures Length = 269 Back     alignment and structure
>pdb|1NDU|A Chain A, Bacillus Lentus Subtilisin Variant S101gV104N Length = 269 Back     alignment and structure
>pdb|1NDQ|A Chain A, Bacillus Lentus Subtilisin Length = 269 Back     alignment and structure
>pdb|2SNI|E Chain E, Structural Comparison Of Two Serine Proteinase-Protein Inhibitor Complexes. Eglin-C-Subtilisin Carlsberg And Ci-2- Subtilisin Novo Length = 275 Back     alignment and structure
>pdb|2SBT|A Chain A, A Comparison Of The Three-Dimensional Structures Of Subtilisin Bpn And Subtilisin Novo Length = 275 Back     alignment and structure
>pdb|3CNQ|S Chain S, Prosubtilisin Substrate Complex Of Subtilisin Subt_bacam Length = 266 Back     alignment and structure
>pdb|1AK9|A Chain A, Subtilisin Mutant 8321 Length = 275 Back     alignment and structure
>pdb|3LPC|A Chain A, Crystal Structure Of A Subtilisin-Like Protease Length = 340 Back     alignment and structure
>pdb|3LPA|A Chain A, Crystal Structure Of A Subtilisin-Like Protease Length = 340 Back     alignment and structure
>pdb|1LW6|E Chain E, Crystal Structure Of The Complex Of Subtilisin Bpn' With Chymotrypsin Inhibitor 2 At 1.5 Angstrom Resolution Length = 281 Back     alignment and structure
>pdb|3LPD|A Chain A, Crystal Structure Of A Subtilisin-Like Protease Length = 339 Back     alignment and structure
>pdb|2SIC|E Chain E, Refined Crystal Structure Of The Complex Of Subtilisin Bpn' And Streptomyces Subtilisin Inhibitor At 1.8 Angstroms Resolution Length = 275 Back     alignment and structure
>pdb|1S02|A Chain A, Effects Of Engineered Salt Bridges On The Stability Of Subtilisin Bpn' Length = 275 Back     alignment and structure
>pdb|1C9N|A Chain A, Bacillus Lentus Substilisin Variant (Ser 87) K27rV104YN123ST274A Length = 269 Back     alignment and structure
>pdb|1SUB|A Chain A, Calcium-Independent Subtilisin By Design Length = 275 Back     alignment and structure
>pdb|1DUI|A Chain A, Subtilisin Bpn' From Bacillus Amyloliquefaciens, Crystal Growth Mutant Length = 266 Back     alignment and structure
>pdb|1A2Q|A Chain A, Subtilisin Bpn' Mutant 7186 Length = 275 Back     alignment and structure
>pdb|1IAV|A Chain A, Structure On Native (Asn 87) Subtilisin From Bacillus Lentus Length = 269 Back     alignment and structure
>pdb|1SUC|A Chain A, Calcium-Independent Subtilisin By Design Length = 275 Back     alignment and structure
>pdb|1SBI|A Chain A, Subtilisin Bpn' 8397 (E.C. 3.4.21.14) Mutant (M50f, N76d, G169a, Q206c, N218s) Length = 275 Back     alignment and structure
>pdb|1Q5P|A Chain A, S156e/s166d Variant Of Bacillus Lentus Subtilisin Length = 269 Back     alignment and structure
>pdb|1SUE|A Chain A, Subtilisin Bpn' From Bacillus Amyloliquefaciens, Mutant Length = 266 Back     alignment and structure
>pdb|1C9M|A Chain A, Bacillus Lentus Subtilsin (Ser 87) N76dS103AV104I Length = 269 Back     alignment and structure
>pdb|1WSD|A Chain A, Alkaline M-Protease Form I Crystal Strcuture Length = 269 Back     alignment and structure
>pdb|1S01|A Chain A, Large Increases In General Stability For Subtilisin Bpn(Prime) Through Incremental Changes In The Free Energy Of Unfolding Length = 275 Back     alignment and structure
>pdb|1AQN|A Chain A, Subtilisin Mutant 8324 Length = 275 Back     alignment and structure
>pdb|1SUA|A Chain A, Subtilisin Bpn' Length = 266 Back     alignment and structure
>pdb|1SPB|S Chain S, Subtilisin Bpn' Prosegment (77 Residues) Complexed With A Mutant Subtilisin Bpn' (266 Residues). Crystal Ph 4.6. Crystallization Temperature 20 C Diffraction Temperature- 160 C Length = 266 Back     alignment and structure
>pdb|1UBN|A Chain A, Selenosubtilisin Bpn Length = 275 Back     alignment and structure
>pdb|1V5I|A Chain A, Crystal Structure Of Serine Protease Inhibitor Poia1 In Complex With Subtilisin Bpn' Length = 275 Back     alignment and structure
>pdb|1MEE|A Chain A, The Complex Between The Subtilisin From A Mesophilic Bacterium And The Leech Inhibitor Eglin-C Length = 275 Back     alignment and structure
>pdb|1YJB|A Chain A, Subtilisin Bpn' 8397+1 (E.C. 3.4.21.14) (Mutant With Met 50 Replaced By Phe, Asn 76 Replaced By Asp, Gly 169 Replaced By Ala, Gln 206 Replaced By Cys, Asn 218 Replaced By Ser And Lys 256 Replaced By Tyr) (M50f, N76d, G169a, Q206c, N218s, And K256y) In 35% Dimethylformamide Length = 275 Back     alignment and structure
>pdb|1BH6|A Chain A, Subtilisin Dy In Complex With The Synthetic Inhibitor N- Benzyloxycarbonyl-Ala-Pro-Phe-Chloromethyl Ketone Length = 274 Back     alignment and structure
>pdb|1GNV|A Chain A, Calcium Independent Subtilisin Bpn' Mutant Length = 266 Back     alignment and structure
>pdb|1GNS|A Chain A, Subtilisin Bpn' Length = 263 Back     alignment and structure
>pdb|1ST2|A Chain A, The Three-Dimensional Structure Of Bacillus Amyloliquefaciens Subtilisin At 1.8 Angstroms And An Analysis Of The Structural Consequences Of Peroxide Inactivation Length = 275 Back     alignment and structure
>pdb|4DWW|A Chain A, Crystal Structure Of Nattokinase From Bacillus Subtilis Natto Length = 275 Back     alignment and structure
>pdb|1SCJ|A Chain A, Crystal Structure Of Subtilisin-Propeptide Complex Length = 275 Back     alignment and structure
>pdb|2B6N|A Chain A, The 1.8 A Crystal Structure Of A Proteinase K Like Enzyme From A Psychrotroph Serratia Species Length = 278 Back     alignment and structure
>pdb|1XF1|A Chain A, Structure Of C5a Peptidase- A Key Virulence Factor From Streptococcus Length = 926 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query702
3vta_A621 Cucumisin; subtilisin-like fold, serine protease, 0.0
3i6s_A649 Subtilisin-like protease; PA-domain, FN3-domain, h 0.0
1xf1_A 926 C5A peptidase, SCP; hydrolase; HET: CIT; 1.90A {St 1e-136
3afg_A539 Subtilisin-like serine protease; propeptide, therm 3e-25
3afg_A539 Subtilisin-like serine protease; propeptide, therm 1e-14
1y9z_A441 Alkaline serine protease; subtilisin-like alpha/be 1e-24
1y9z_A441 Alkaline serine protease; subtilisin-like alpha/be 9e-05
3lxu_X 1354 Tripeptidyl-peptidase 2; spindle complex, aminopep 8e-23
3lxu_X 1354 Tripeptidyl-peptidase 2; spindle complex, aminopep 5e-15
1r0r_E274 Subtilisin carlsberg; high resolution, serine prot 2e-21
1r0r_E274 Subtilisin carlsberg; high resolution, serine prot 4e-14
2ixt_A310 36KDA protease; serine protease, sphericase, subti 2e-21
2ixt_A310 36KDA protease; serine protease, sphericase, subti 2e-11
1gci_A269 Subtilisin; hydrolase, serine protease; 0.78A {Bac 3e-21
1gci_A269 Subtilisin; hydrolase, serine protease; 0.78A {Bac 6e-14
1to2_E281 Subtilisin BPN'; serine protease, hydrolase; HET: 4e-21
1to2_E281 Subtilisin BPN'; serine protease, hydrolase; HET: 2e-14
2iy9_A347 SUBA; toxin, shiga, plasmid; 1.8A {Escherichia col 5e-19
2iy9_A347 SUBA; toxin, shiga, plasmid; 1.8A {Escherichia col 7e-11
4aks_A360 PATG, thiazoline oxidase/subtilisin-like protease; 4e-18
4aks_A360 PATG, thiazoline oxidase/subtilisin-like protease; 3e-16
1wmd_A434 Protease; alpha-beta hydrolase fold, jelly-roll be 7e-18
1wmd_A434 Protease; alpha-beta hydrolase fold, jelly-roll be 4e-14
1r6v_A671 Subtilisin-like serine protease; sandwich domain, 7e-18
1r6v_A671 Subtilisin-like serine protease; sandwich domain, 3e-11
3t41_A471 Epidermin leader peptide processing serine protea; 1e-17
3t41_A471 Epidermin leader peptide processing serine protea; 6e-14
2x8j_A327 Intracellular subtilisin protease; hydrolase, seri 1e-17
2x8j_A327 Intracellular subtilisin protease; hydrolase, seri 6e-12
3lpc_A340 APRB2; protease, subtilase, virulence factor, hydr 2e-16
3lpc_A340 APRB2; protease, subtilase, virulence factor, hydr 3e-11
1thm_A279 Thermitase; hydrolase(serine protease); 1.37A {The 5e-16
1thm_A279 Thermitase; hydrolase(serine protease); 1.37A {The 2e-13
2z30_A320 TK-subtilisin; thermococcus kodakaraensis, hydrola 1e-15
2z30_A320 TK-subtilisin; thermococcus kodakaraensis, hydrola 8e-11
1dbi_A280 AK.1 serine protease; hydrolase; 1.80A {Bacillus S 1e-15
1dbi_A280 AK.1 serine protease; hydrolase; 1.80A {Bacillus S 3e-13
2z2z_A395 TK-subtilisin precursor; thermococcus kodakaraensi 2e-15
2z2z_A395 TK-subtilisin precursor; thermococcus kodakaraensi 2e-14
2b6n_A278 Proteinase K; S binding, substrate specificity, pr 7e-15
2b6n_A278 Proteinase K; S binding, substrate specificity, pr 2e-06
1sh7_A284 Extracellular subtilisin-like serine proteinase; c 2e-14
1sh7_A284 Extracellular subtilisin-like serine proteinase; c 3e-06
4dzt_A276 Aqualysin-1, aqualysin-I; serine protease, calcium 4e-14
4dzt_A276 Aqualysin-1, aqualysin-I; serine protease, calcium 4e-06
2qtw_B546 Proprotein convertase subtilisin/kexin type 9; cor 1e-13
2qtw_B546 Proprotein convertase subtilisin/kexin type 9; cor 8e-06
2p4e_P692 Proprotein convertase subtilisin/kexin type 9; pro 9e-13
2p4e_P692 Proprotein convertase subtilisin/kexin type 9; pro 8e-11
3f7m_A279 Alkaline serine protease VER112; verticillium psal 4e-12
3f7m_A279 Alkaline serine protease VER112; verticillium psal 2e-05
2pwa_A279 Proteinase K; structure, alanine boronic acid, hyd 1e-11
2pwa_A279 Proteinase K; structure, alanine boronic acid, hyd 2e-05
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 3e-07
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-04
2oxa_A600 Extracellular serine protease; kexin, hydrolase; 1 7e-04
2id4_A503 Kexin; KEX2, kexin, furin, proprotein, prohormone, 8e-04
1p8j_A471 Furin precursor; prohormone convertase, SPC1, PACE 8e-04
>3vta_A Cucumisin; subtilisin-like fold, serine protease, hydrolase; HET: DFP NAG FUC BMA MAN; 2.75A {Cucumis melo} Length = 621 Back     alignment and structure
 Score =  706 bits (1824), Expect = 0.0
 Identities = 352/623 (56%), Positives = 445/623 (71%), Gaps = 9/623 (1%)

Query: 73  TTRSWDFMGFSEHV-KRATTESDIIVGMLDTGIWPESQSFSDENFGPPPKKWKGSCQTSS 131
           TTRSWDF+GF   V +R+  ES+I+VG+LDTGIWPES SF DE F PPP KWKG+C+TS+
Sbjct: 1   TTRSWDFLGFPLTVPRRSQVESNIVVGVLDTGIWPESPSFDDEGFSPPPPKWKGTCETSN 60

Query: 132 NFTCNNKIIGAKFYRSDKKFSPFDFKSPRDSEGHGTHTSSTAAGGLVSKASLFGIGFGTA 191
           NF CN KIIGA+ Y   +  SP D   PRD+ GHGTHT+STAAGGLVS+A+L+G+G GTA
Sbjct: 61  NFRCNRKIIGARSYHIGRPISPGDVNGPRDTNGHGTHTASTAAGGLVSQANLYGLGLGTA 120

Query: 192 IGGVPSARIAVYKICWFDGCADADILAAFDDAIADGVDIISISVGSFSAVNYFEDTIAIG 251
            GGVP ARIA YK+CW DGC+D DILAA+DDAIADGVDIIS+SVG  +  +YF D IAIG
Sbjct: 121 RGGVPLARIAAYKVCWNDGCSDTDILAAYDDAIADGVDIISLSVGGANPRHYFVDAIAIG 180

Query: 252 SFHAMKKGILTSNSAGNSGPDAASLANVAPWTLSVAASTVDRKFVTRVKLGNGEVYEGIS 311
           SFHA+++GILTSNSAGN GP+  + A+++PW LSVAAST+DRKFVT+V++GNG+ ++G+S
Sbjct: 181 SFHAVERGILTSNSAGNGGPNFFTTASLSPWLLSVAASTMDRKFVTQVQIGNGQSFQGVS 240

Query: 312 INTIDYKGKMFPLIYGGDAPNRTGGYQGSNSRFCSLGSLDEKLVQGKIVLCD-ELNDGFG 370
           INT  +  + +PL+ G D PN   G+  S SRFC+  S++  L++GKIV+C+        
Sbjct: 241 INT--FDNQYYPLVSGRDIPN--TGFDKSTSRFCTDKSVNPNLLKGKIVVCEASFGPHEF 296

Query: 371 AATARAVGSVMQGNDDRDVAYSFPLPNSYLDLYDGSKIASYLNSTSIPTATILKSTAEKN 430
             +      V+  ++ RD A S+PLP+S LD  D      Y+ S   P ATI KST   N
Sbjct: 297 FKSLDGAAGVLMTSNTRDYADSYPLPSSVLDPNDLLATLRYIYSIRSPGATIFKSTTILN 356

Query: 431 EFAPVVASFSSRGPNPITNDILKPDLTAPGVDILASWTQASSPSEGDPRISPFNIISGTS 490
             APVV SFSSRGPN  T D++KPD++ PGV+ILA+W   +    G  R + FNIISGTS
Sbjct: 357 ASAPVVVSFSSRGPNRATKDVIKPDISGPGVEILAAWPSVAPVG-GIRRNTLFNIISGTS 415

Query: 491 MSCPHATAAAAYVKSFYPSWSPAAIKSALMTTATPMSVEANSDAEFAYGSGHLNPSMAVN 550
           MSCPH T  A YVK++ P+WSPAAIKSALMTTA+PM+   N  AEFAYGSGH+NP  AV 
Sbjct: 416 MSCPHITGIATYVKTYNPTWSPAAIKSALMTTASPMNARFNPQAEFAYGSGHVNPLKAVR 475

Query: 551 PGLVYDAGELDYVKFLCGQGYSDKNLSLVTGDNRSCSNSTNATVWDLNYPSFALSTKPGN 610
           PGLVYDA E DYVKFLCGQGY+ + +  +TGD  +C++     VWDLNYPSF LS  P  
Sbjct: 476 PGLVYDANESDYVKFLCGQGYNTQAVRRITGDYSACTSGNTGRVWDLNYPSFGLSVSPSQ 535

Query: 611 NTTQVFHRTVTNVGSAVSTYRAVVYTRPGLMIKVQPSVLYFKSLYQKQSFVVTVTANVGK 670
              Q F+RT+T+V    STYRA++    GL I V P+VL F  L  ++SF +TV  ++  
Sbjct: 536 TFNQYFNRTLTSVAPQASTYRAMISAPQGLTISVNPNVLSFNGLGDRKSFTLTVRGSIKG 595

Query: 671 SVNMISASLVWDDGVHHVRSPVV 693
            V  +SASLVW DGVH+VRSP+ 
Sbjct: 596 FV--VSASLVWSDGVHYVRSPIT 616
>3i6s_A Subtilisin-like protease; PA-domain, FN3-domain, hydrolase; HET: NAG FUC; 2.50A {Solanum lycopersicum} PDB: 3i74_A* Length = 649 Back     alignment and structure
>1xf1_A C5A peptidase, SCP; hydrolase; HET: CIT; 1.90A {Streptococcus pyogenes} PDB: 3eif_A* Length = 926 Back     alignment and structure
>3afg_A Subtilisin-like serine protease; propeptide, thermococcus kodakaraensis, hydrolas protease; 2.00A {Thermococcus kodakarensis} Length = 539 Back     alignment and structure
>3afg_A Subtilisin-like serine protease; propeptide, thermococcus kodakaraensis, hydrolas protease; 2.00A {Thermococcus kodakarensis} Length = 539 Back     alignment and structure
>1y9z_A Alkaline serine protease; subtilisin-like alpha/beta domain, insert beta barrel domain hydrolase; HET: PMS; 1.40A {Pseudoalteromonas SP} PDB: 1v6c_A* 1wvm_A* Length = 441 Back     alignment and structure
>1y9z_A Alkaline serine protease; subtilisin-like alpha/beta domain, insert beta barrel domain hydrolase; HET: PMS; 1.40A {Pseudoalteromonas SP} PDB: 1v6c_A* 1wvm_A* Length = 441 Back     alignment and structure
>3lxu_X Tripeptidyl-peptidase 2; spindle complex, aminopeptidase, hydrolase, phosphoprotein, protease; 3.14A {Drosophila melanogaster} Length = 1354 Back     alignment and structure
>3lxu_X Tripeptidyl-peptidase 2; spindle complex, aminopeptidase, hydrolase, phosphoprotein, protease; 3.14A {Drosophila melanogaster} Length = 1354 Back     alignment and structure
>1r0r_E Subtilisin carlsberg; high resolution, serine protease, protein inhibitor, hydrolase; 1.10A {Bacillus licheniformis} SCOP: c.41.1.1 PDB: 1af4_A* 1be8_A* 1bfk_A 1bfu_A 1be6_A 1oyv_A 1cse_E 1sbc_A 1sca_A 1scb_A 1scd_A 2sec_E 2wuv_A 2wuw_E 1yu6_A 1scn_E* 1c3l_A 1avt_A* 1av7_A* 1sel_A ... Length = 274 Back     alignment and structure
>1r0r_E Subtilisin carlsberg; high resolution, serine protease, protein inhibitor, hydrolase; 1.10A {Bacillus licheniformis} SCOP: c.41.1.1 PDB: 1af4_A* 1be8_A* 1bfk_A 1bfu_A 1be6_A 1oyv_A 1cse_E 1sbc_A 1sca_A 1scb_A 1scd_A 2sec_E 2wuv_A 2wuw_E 1yu6_A 1scn_E* 1c3l_A 1avt_A* 1av7_A* 1sel_A ... Length = 274 Back     alignment and structure
>2ixt_A 36KDA protease; serine protease, sphericase, subtilisin like protease, hydrolase; 0.8A {Bacillus sphaericus} SCOP: c.41.1.1 PDB: 3d43_A 1ea7_A* 2gko_A* Length = 310 Back     alignment and structure
>2ixt_A 36KDA protease; serine protease, sphericase, subtilisin like protease, hydrolase; 0.8A {Bacillus sphaericus} SCOP: c.41.1.1 PDB: 3d43_A 1ea7_A* 2gko_A* Length = 310 Back     alignment and structure
>1gci_A Subtilisin; hydrolase, serine protease; 0.78A {Bacillus lentus} SCOP: c.41.1.1 PDB: 1jea_A 1ndq_A 1svn_A 1tk2_A* 3bx1_A 1ah2_A 1iav_A* 1c9m_A* 1wsd_A 1mpt_A 1ndu_A 1c9j_A 1q5p_A* 1st3_A 1c9n_A* Length = 269 Back     alignment and structure
>1gci_A Subtilisin; hydrolase, serine protease; 0.78A {Bacillus lentus} SCOP: c.41.1.1 PDB: 1jea_A 1ndq_A 1svn_A 1tk2_A* 3bx1_A 1ah2_A 1iav_A* 1c9m_A* 1wsd_A 1mpt_A 1ndu_A 1c9j_A 1q5p_A* 1st3_A 1c9n_A* Length = 269 Back     alignment and structure
>1to2_E Subtilisin BPN'; serine protease, hydrolase; HET: CIT 15P; 1.30A {Bacillus amyloliquefaciens} SCOP: c.41.1.1 PDB: 1tm1_E* 1tm3_E* 1tm4_E* 1lw6_E* 1tm7_E* 1tmg_E* 1to1_E* 1tm5_E* 1y1k_E* 1y33_E* 1y34_E* 1y3b_E* 1y3c_E* 1y3d_E* 1y3f_E* 1y48_E* 1y4a_E* 1y4d_E 1sup_A* 1sib_E ... Length = 281 Back     alignment and structure
>1to2_E Subtilisin BPN'; serine protease, hydrolase; HET: CIT 15P; 1.30A {Bacillus amyloliquefaciens} SCOP: c.41.1.1 PDB: 1tm1_E* 1tm3_E* 1tm4_E* 1lw6_E* 1tm7_E* 1tmg_E* 1to1_E* 1tm5_E* 1y1k_E* 1y33_E* 1y34_E* 1y3b_E* 1y3c_E* 1y3d_E* 1y3f_E* 1y48_E* 1y4a_E* 1y4d_E 1sup_A* 1sib_E ... Length = 281 Back     alignment and structure
>2iy9_A SUBA; toxin, shiga, plasmid; 1.8A {Escherichia coli} Length = 347 Back     alignment and structure
>2iy9_A SUBA; toxin, shiga, plasmid; 1.8A {Escherichia coli} Length = 347 Back     alignment and structure
>4aks_A PATG, thiazoline oxidase/subtilisin-like protease; hydrolase, patellamide; 2.19A {Prochloron didemni} PDB: 4akt_A Length = 360 Back     alignment and structure
>4aks_A PATG, thiazoline oxidase/subtilisin-like protease; hydrolase, patellamide; 2.19A {Prochloron didemni} PDB: 4akt_A Length = 360 Back     alignment and structure
>1wmd_A Protease; alpha-beta hydrolase fold, jelly-roll beta-barrel, hydrolase; 1.30A {Bacillus SP} SCOP: b.18.1.20 c.41.1.1 PDB: 1wme_A 1wmf_A Length = 434 Back     alignment and structure
>1wmd_A Protease; alpha-beta hydrolase fold, jelly-roll beta-barrel, hydrolase; 1.30A {Bacillus SP} SCOP: b.18.1.20 c.41.1.1 PDB: 1wme_A 1wmf_A Length = 434 Back     alignment and structure
>1r6v_A Subtilisin-like serine protease; sandwich domain, propeptide, hydrolase; 1.70A {Fervidobacterium pennivorans} SCOP: c.41.1.1 Length = 671 Back     alignment and structure
>1r6v_A Subtilisin-like serine protease; sandwich domain, propeptide, hydrolase; 1.70A {Fervidobacterium pennivorans} SCOP: c.41.1.1 Length = 671 Back     alignment and structure
>3t41_A Epidermin leader peptide processing serine protea; structural genomics, center for structural genomics of infec diseases, csgid; 1.95A {Staphylococcus aureus} PDB: 3qfh_A Length = 471 Back     alignment and structure
>3t41_A Epidermin leader peptide processing serine protea; structural genomics, center for structural genomics of infec diseases, csgid; 1.95A {Staphylococcus aureus} PDB: 3qfh_A Length = 471 Back     alignment and structure
>2x8j_A Intracellular subtilisin protease; hydrolase, serine protease, intracellular proteinase regulat; HET: CSX 1PE; 1.56A {Bacillus clausii} PDB: 2wv7_A 2wwt_A 2xrm_A* Length = 327 Back     alignment and structure
>2x8j_A Intracellular subtilisin protease; hydrolase, serine protease, intracellular proteinase regulat; HET: CSX 1PE; 1.56A {Bacillus clausii} PDB: 2wv7_A 2wwt_A 2xrm_A* Length = 327 Back     alignment and structure
>3lpc_A APRB2; protease, subtilase, virulence factor, hydrolase; 1.70A {Dichelobacter nodosus} PDB: 3lpa_A 3lpd_A 3ti9_A 3ti7_A Length = 340 Back     alignment and structure
>3lpc_A APRB2; protease, subtilase, virulence factor, hydrolase; 1.70A {Dichelobacter nodosus} PDB: 3lpa_A 3lpd_A 3ti9_A 3ti7_A Length = 340 Back     alignment and structure
>1thm_A Thermitase; hydrolase(serine protease); 1.37A {Thermoactinomyces vulgaris} SCOP: c.41.1.1 PDB: 2tec_E 1tec_E 3tec_E Length = 279 Back     alignment and structure
>1thm_A Thermitase; hydrolase(serine protease); 1.37A {Thermoactinomyces vulgaris} SCOP: c.41.1.1 PDB: 2tec_E 1tec_E 3tec_E Length = 279 Back     alignment and structure
>2z30_A TK-subtilisin; thermococcus kodakaraensis, hydrolase; 1.65A {Thermococcus kodakarensis} PDB: 3a3o_A 3a3n_A 2zrq_A 2z57_A 2z56_A 2z58_A 3a3p_A 2z2x_A* 2z2y_A Length = 320 Back     alignment and structure
>2z30_A TK-subtilisin; thermococcus kodakaraensis, hydrolase; 1.65A {Thermococcus kodakarensis} PDB: 3a3o_A 3a3n_A 2zrq_A 2z57_A 2z56_A 2z58_A 3a3p_A 2z2x_A* 2z2y_A Length = 320 Back     alignment and structure
>1dbi_A AK.1 serine protease; hydrolase; 1.80A {Bacillus SP} SCOP: c.41.1.1 Length = 280 Back     alignment and structure
>1dbi_A AK.1 serine protease; hydrolase; 1.80A {Bacillus SP} SCOP: c.41.1.1 Length = 280 Back     alignment and structure
>2z2z_A TK-subtilisin precursor; thermococcus kodakaraensis, hydrolase; 1.87A {Thermococcus kodakarensis} PDB: 2e1p_A 2zwp_A 2zwo_A Length = 395 Back     alignment and structure
>2z2z_A TK-subtilisin precursor; thermococcus kodakaraensis, hydrolase; 1.87A {Thermococcus kodakarensis} PDB: 2e1p_A 2zwp_A 2zwo_A Length = 395 Back     alignment and structure
>2b6n_A Proteinase K; S binding, substrate specificity, proteinase K, subtilase, psychrotrophic, psychrophilic, hydrolase; 1.80A {Serratia SP} Length = 278 Back     alignment and structure
>2b6n_A Proteinase K; S binding, substrate specificity, proteinase K, subtilase, psychrotrophic, psychrophilic, hydrolase; 1.80A {Serratia SP} Length = 278 Back     alignment and structure
>1sh7_A Extracellular subtilisin-like serine proteinase; cold adaptation, psychrotrophic, subtilisin-like proteinase, depentent, hydrolase; HET: PMS; 1.84A {Vibrio SP} PDB: 1s2n_A* Length = 284 Back     alignment and structure
>1sh7_A Extracellular subtilisin-like serine proteinase; cold adaptation, psychrotrophic, subtilisin-like proteinase, depentent, hydrolase; HET: PMS; 1.84A {Vibrio SP} PDB: 1s2n_A* Length = 284 Back     alignment and structure
>4dzt_A Aqualysin-1, aqualysin-I; serine protease, calcium binding, inhibitor, hydrolase-hydro inhibitor complex; HET: PMS; 1.95A {Thermus aquaticus} Length = 276 Back     alignment and structure
>4dzt_A Aqualysin-1, aqualysin-I; serine protease, calcium binding, inhibitor, hydrolase-hydro inhibitor complex; HET: PMS; 1.95A {Thermus aquaticus} Length = 276 Back     alignment and structure
>2qtw_B Proprotein convertase subtilisin/kexin type 9; coronary heart disease, hypercholest low density lipoprotein receptor, autocatalytic cleavage; HET: NAG; 1.90A {Homo sapiens} PDB: 3m0c_B 3bps_A 3gcw_A 3gcx_A 3p5b_A 3p5c_A 2pmw_B 3h42_B 2w2n_A 2w2m_A 2w2p_A 2w2q_A 2xtj_A 2w2o_A Length = 546 Back     alignment and structure
>2qtw_B Proprotein convertase subtilisin/kexin type 9; coronary heart disease, hypercholest low density lipoprotein receptor, autocatalytic cleavage; HET: NAG; 1.90A {Homo sapiens} PDB: 3m0c_B 3bps_A 3gcw_A 3gcx_A 3p5b_A 3p5c_A 2pmw_B 3h42_B 2w2n_A 2w2m_A 2w2p_A 2w2q_A 2xtj_A 2w2o_A Length = 546 Back     alignment and structure
>2p4e_P Proprotein convertase subtilisin/kexin type 9; protease, LDL receptor, LDL, endocytosis, hydrol; 1.98A {Homo sapiens} Length = 692 Back     alignment and structure
>2p4e_P Proprotein convertase subtilisin/kexin type 9; protease, LDL receptor, LDL, endocytosis, hydrol; 1.98A {Homo sapiens} Length = 692 Back     alignment and structure
>3f7m_A Alkaline serine protease VER112; verticillium psalliotae, cuticle- degrading protease, nematodes, hydrolase, secreted, zymogen; 1.60A {Lecanicillium psalliotae} PDB: 3f7o_A Length = 279 Back     alignment and structure
>3f7m_A Alkaline serine protease VER112; verticillium psalliotae, cuticle- degrading protease, nematodes, hydrolase, secreted, zymogen; 1.60A {Lecanicillium psalliotae} PDB: 3f7o_A Length = 279 Back     alignment and structure
>2pwa_A Proteinase K; structure, alanine boronic acid, hydrolase; 0.83A {Engyodontium album} SCOP: c.41.1.1 PDB: 1p7v_A 1p7w_A 2dqk_A 2duj_A 2g4v_A 2hd4_A 2hpz_A 2id8_A 2pq2_A 1ic6_A 2pwb_A* 2pyz_A* 2v8b_A 3aj8_A 3aj9_A 3dyb_A* 3gt3_A* 3gt4_A* 3l1k_A 3osz_A ... Length = 279 Back     alignment and structure
>2pwa_A Proteinase K; structure, alanine boronic acid, hydrolase; 0.83A {Engyodontium album} SCOP: c.41.1.1 PDB: 1p7v_A 1p7w_A 2dqk_A 2duj_A 2g4v_A 2hd4_A 2hpz_A 2id8_A 2pq2_A 1ic6_A 2pwb_A* 2pyz_A* 2v8b_A 3aj8_A 3aj9_A 3dyb_A* 3gt3_A* 3gt4_A* 3l1k_A 3osz_A ... Length = 279 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>2id4_A Kexin; KEX2, kexin, furin, proprotein, prohormone, convertase, SUBT like protease, serine protease; HET: NDG; 1.90A {Saccharomyces cerevisiae} SCOP: b.18.1.20 c.41.1.1 PDB: 1r64_A* 1ot5_A* Length = 503 Back     alignment and structure
>1p8j_A Furin precursor; prohormone convertase, SPC1, PACE, P-domain; HET: DKA AR7 NAG FUL BMA MAN GAL FUC; 2.60A {Mus musculus} SCOP: b.18.1.20 c.41.1.1 Length = 471 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query702
3i6s_A649 Subtilisin-like protease; PA-domain, FN3-domain, h 100.0
3vta_A621 Cucumisin; subtilisin-like fold, serine protease, 100.0
1xf1_A 926 C5A peptidase, SCP; hydrolase; HET: CIT; 1.90A {St 100.0
3afg_A539 Subtilisin-like serine protease; propeptide, therm 100.0
2z2z_A395 TK-subtilisin precursor; thermococcus kodakaraensi 100.0
3t41_A471 Epidermin leader peptide processing serine protea; 100.0
1y9z_A441 Alkaline serine protease; subtilisin-like alpha/be 100.0
1r6v_A671 Subtilisin-like serine protease; sandwich domain, 100.0
1r0r_E274 Subtilisin carlsberg; high resolution, serine prot 100.0
4h6x_A357 Thiazoline oxidase/subtilisin-like protease; hydro 100.0
1dbi_A280 AK.1 serine protease; hydrolase; 1.80A {Bacillus S 100.0
1gci_A269 Subtilisin; hydrolase, serine protease; 0.78A {Bac 100.0
1to2_E281 Subtilisin BPN'; serine protease, hydrolase; HET: 100.0
2p4e_P692 Proprotein convertase subtilisin/kexin type 9; pro 100.0
1thm_A279 Thermitase; hydrolase(serine protease); 1.37A {The 100.0
2x8j_A327 Intracellular subtilisin protease; hydrolase, seri 100.0
4h6w_A306 N-terminal cyanobactin protease; hydrolase; 2.45A 100.0
3zxy_A282 Subtilisin-like protein; hydrolase; 1.58A {Prochlo 100.0
2ixt_A310 36KDA protease; serine protease, sphericase, subti 100.0
2z30_A320 TK-subtilisin; thermococcus kodakaraensis, hydrola 100.0
2iy9_A347 SUBA; toxin, shiga, plasmid; 1.8A {Escherichia col 100.0
3lpc_A340 APRB2; protease, subtilase, virulence factor, hydr 100.0
1wmd_A434 Protease; alpha-beta hydrolase fold, jelly-roll be 100.0
3lxu_X 1354 Tripeptidyl-peptidase 2; spindle complex, aminopep 100.0
1sh7_A284 Extracellular subtilisin-like serine proteinase; c 100.0
2b6n_A278 Proteinase K; S binding, substrate specificity, pr 100.0
4dzt_A276 Aqualysin-1, aqualysin-I; serine protease, calcium 100.0
2oxa_A600 Extracellular serine protease; kexin, hydrolase; 1 100.0
2pwa_A279 Proteinase K; structure, alanine boronic acid, hyd 100.0
1p8j_A471 Furin precursor; prohormone convertase, SPC1, PACE 100.0
2id4_A503 Kexin; KEX2, kexin, furin, proprotein, prohormone, 100.0
3f7m_A279 Alkaline serine protease VER112; verticillium psal 100.0
2qtw_B546 Proprotein convertase subtilisin/kexin type 9; cor 100.0
3hjr_A600 Extracellular serine protease; kexin, hydrolase; 1 100.0
1t1e_A552 Kumamolisin; proenzyme, prosubtilase, activation m 99.9
1ga6_A372 Serine-carboxyl proteinase; serine-carboxyl protei 99.84
3edy_A544 Tripeptidyl-peptidase 1; protease, TPP1, sedolisin 98.94
2w2n_P114 Proprotein convertase subtilisin/kexin type 9; hyd 98.41
3cnq_P80 Subtilisin BPN'; uncleaved, proenzyme, substrate c 98.12
2qtw_A124 Proprotein convertase subtilisin/kexin type 9 Pro; 97.92
3icu_A194 E3 ubiquitin-protein ligase RNF128; E3 ligase, ene 97.81
1v5i_B76 POIA1, IA-1=serine proteinase inhibitor; protease- 97.29
2z30_B65 TK-subtilisin; thermococcus kodakaraensis, hydrola 96.43
2ys4_A122 Hydrocephalus-inducing protein homolog; hydin, PAP 94.52
3iib_A444 Peptidase M28; YP_926796.1, structural genomics, J 92.85
2ek8_A421 Aminopeptidase; metalloproteinase, hydrolase; 1.80 92.84
3qbt_B140 Inositol polyphosphate 5-phosphatase OCRL-1; prote 92.59
3lxu_X 1354 Tripeptidyl-peptidase 2; spindle complex, aminopep 92.47
2r39_A118 FIXG-related protein; structural GE PSI-2, protein 87.63
2e6j_A112 Hydin protein; PAPD, structural genomics, NPPSFA, 86.81
3kas_A 640 Transferrin receptor protein 1; transferrin recept 84.7
3fed_A 707 Glutamate carboxypeptidase III; metallopeptidase, 84.04
>3i6s_A Subtilisin-like protease; PA-domain, FN3-domain, hydrolase; HET: NAG FUC; 2.50A {Solanum lycopersicum} PDB: 3i74_A* Back     alignment and structure
Probab=100.00  E-value=6.8e-123  Score=1063.91  Aligned_cols=607  Identities=39%  Similarity=0.620  Sum_probs=543.3

Q ss_pred             cCCCccccCchh---hcccCCCCCCcEEEEeccCCCCCCCCCCCCCCCCCCCCccccccCCCCc---ccCceeEeeeecc
Q 043420           73 TTRSWDFMGFSE---HVKRATTESDIIVGMLDTGIWPESQSFSDENFGPPPKKWKGSCQTSSNF---TCNNKIIGAKFYR  146 (702)
Q Consensus        73 ~~~s~~~~g~~~---~w~~~~~G~gV~VgVIDtGid~~Hp~f~d~~~~~~~~~w~g~~~~~~~~---~~n~kiig~~~~~  146 (702)
                      |+++|+|+|++.   +|..+++|+||+|||||||||++||+|.+.+++|+|.+|+|.|+.+.+|   .||+|++++++|.
T Consensus         1 Tt~s~~flgl~~~~~~w~~~~~G~gViVaViDTGId~~Hp~f~d~g~~p~p~~wkg~c~~g~~f~~~~cN~kiig~~~f~   80 (649)
T 3i6s_A            1 TTHTSDFLKLNPSSGLWPASGLGQDVIVAVLDSGIWPESASFQDDGMPEIPKRWKGICKPGTQFNASMCNRKLIGANYFN   80 (649)
T ss_dssp             CCSHHHHTTCCSSSSHHHHHGGGTTCEEEEEESCBCTTSGGGCCTTCCCCCTTCCCCBCCBTTBCTTSCCSSEEEEEECC
T ss_pred             CCCChHHcCCCCchhhHhccCCCCCCEEEEEccCCCCCChhhccCCCCCCccccccccccCccccccccccceeeeEecc
Confidence            578999999975   9999999999999999999999999999999999999999999999888   6999999999997


Q ss_pred             cCCC----C-CCCCCCCCCCCCCChhHHHHHhccCCCCCCcccccccceeeecccCCeEEEEEEecCCCCCHHHHHHHHH
Q 043420          147 SDKK----F-SPFDFKSPRDSEGHGTHTSSTAAGGLVSKASLFGIGFGTAIGGVPSARIAVYKICWFDGCADADILAAFD  221 (702)
Q Consensus       147 ~~~~----~-~~~~~~~~~D~~gHGThVAgiaaG~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g~~~~~i~~ai~  221 (702)
                       ++.    . ...+..+++|..||||||||||||+.+++.+++|++.|.+.||||+|+|++||+|+..++..+++++||+
T Consensus        81 -~~~~~~~~~~~~~~~~~~D~~GHGThVAgiiag~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g~~~~~i~~Ai~  159 (649)
T 3i6s_A           81 -KGILANDPTVNITMNSARDTDGHGTHCASITAGNFAKGVSHFGYAPGTARGVAPRARLAVYKFSFNEGTFTSDLIAAMD  159 (649)
T ss_dssp             -HHHHHHCTTCCCTTCSSBCSSSHHHHHHHHHHCCCEEEEEETTEEEEEECCSSTTCEEEEEECEETTEECHHHHHHHHH
T ss_pred             -CcccccccccccCCCCCCCCCCcHHHHHHHHhCCCCcCccccccccCceeEECCCCEEEEEeccCCCCCCHHHHHHHHH
Confidence             321    1 1223567889999999999999999999999999999999999999999999999998899999999999


Q ss_pred             HHHHCCCCEEEEeecCCCCCCCccCHHHHHHHHHHhCCCEEEEccCCCCCCCCCcCCCCCceEEeeeeccCcceeeEEEe
Q 043420          222 DAIADGVDIISISVGSFSAVNYFEDTIAIGSFHAMKKGILTSNSAGNSGPDAASLANVAPWTLSVAASTVDRKFVTRVKL  301 (702)
Q Consensus       222 ~A~~~gvdVIn~SlG~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~~~~~~~a~~vitVgA~~~~~~~~~~~~~  301 (702)
                      ||+++|+||||||||.. ...+..+++.+++++|+++|++||+||||+|+...++++.+||+|+|||++.||.|..++.+
T Consensus       160 ~A~~~gvdVIn~SlG~~-~~~~~~~~i~~a~~~A~~~Gi~vV~AAGN~G~~~~t~~~~ap~vitVgAst~dr~f~~~~~l  238 (649)
T 3i6s_A          160 QAVADGVDMISISYGYR-FIPLYEDAISIASFGAMMKGVLVSASAGNRGPGIGSLNNGSPWILCVASGHTDRTFAGTLTL  238 (649)
T ss_dssp             HHHHTTCSEEEECCCCC-SCCGGGCHHHHHHHHHHHTTCEEEEECCSCTTSTTCCSCCCTTSEEEEEEECSCEEEEEEEE
T ss_pred             HHHHcCCCEEEeCCccC-CcccchhHHHHHHHHHHhCCcEEEEeCCCCCCCCCccCCCCCceEEEeeeecccceeeEEEe
Confidence            99999999999999987 46677899999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCeEEeeEeecccCCCCceeeEEEcCCCCCCCCCCCCCCCCccCCCCCCccCc--CCeEEEEee-----cchhhhhhhc
Q 043420          302 GNGEVYEGISINTIDYKGKMFPLIYGGDAPNRTGGYQGSNSRFCSLGSLDEKLV--QGKIVLCDE-----LNDGFGAATA  374 (702)
Q Consensus       302 ~~g~~~~g~~~~~~~~~~~~~~lv~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~--~gkivl~~~-----~~~~~~~~~a  374 (702)
                      ++++.+.|.+++........+|+++..            ....|.+..++..++  +|||++|+|     .+|..+++.+
T Consensus       239 gng~~~~g~sl~~~~~~~~~~plv~~~------------~~~~C~~~~l~~~~vdl~GkIvlc~~g~~~~~~k~~~~~~~  306 (649)
T 3i6s_A          239 GNGLKIRGWSLFPARAFVRDSPVIYNK------------TLSDCSSEELLSQVENPENTIVICDDNGDFSDQMRIITRAR  306 (649)
T ss_dssp             TTSCEEEEECCCSSCBCEEEEEEECCT------------TTTTCCCHHHHTTSSSGGGCEEEECCCSCHHHHHHHHHHHT
T ss_pred             CCCcEEeeeecccCcccCcceeeEecc------------cccccccccccccccccCCcEEEEeCCCccHHHHHHHHHhc
Confidence            999999999998877667889999865            346899988888877  999999997     5688999999


Q ss_pred             CceEEEEeeCCCCCCCcccCcceEEecchhHHHHHHHHhcCCCcEEEE-eccccccccCCCcccccCCCCCCCCCCCCCC
Q 043420          375 RAVGSVMQGNDDRDVAYSFPLPNSYLDLYDGSKIASYLNSTSIPTATI-LKSTAEKNEFAPVVASFSSRGPNPITNDILK  453 (702)
Q Consensus       375 Ga~g~i~~~~~~~~~~~~~~~p~~~i~~~~~~~l~~~~~~~~~~~~~i-~~~~~~~~~~~~~~a~fSS~Gp~~~~~~~lK  453 (702)
                      |+.|+|++|+......+.+.+|.++|+..+++.|+.|++++.+++++| +..+..+..+.+.++.||||||+...+++||
T Consensus       307 Ga~g~i~~n~~~~~~~~~~~~P~~~v~~~~g~~i~~yi~s~~~~~a~i~~~~t~~~~~~~~~va~FSSrGP~~~~~~ilK  386 (649)
T 3i6s_A          307 LKAAIFISEDPGVFRSATFPNPGVVVNKKEGKQVINYVKNSVTPTATITFQETYLDTKPAPVVAASSARGPSRSYLGISK  386 (649)
T ss_dssp             CSEEEEECCCGGGGGCCCCCSCEEEECHHHHHHHHHHHHTCSSCEEEEEEEEEECCCSSCCEECTTSCCSSCTTCTTSCS
T ss_pred             CceEEEEecCccccccccCcCCEEEEcHHHHHHHHHHHhcCCCceEEEeecceeeccCCCCcccccCCCCCCCCCCCccC
Confidence            999999999884444577899999999999999999999999999999 7778888888999999999999987789999


Q ss_pred             CcEEeCCCcEEeeccCCCCCCC--CCC-CCCCceEeccccchhHHHHHHHHHHHHhCCCCCHHHHHHHHHhcCcCCCCCC
Q 043420          454 PDLTAPGVDILASWTQASSPSE--GDP-RISPFNIISGTSMSCPHATAAAAYVKSFYPSWSPAAIKSALMTTATPMSVEA  530 (702)
Q Consensus       454 PDI~APG~~I~sa~~~~~~~~~--~~~-~~~~y~~~sGTSmAaP~VAG~aALl~q~~P~lsp~~ik~~L~~TA~~~~~~~  530 (702)
                      |||+|||++|+++|+....+..  .+. +...|..+||||||||||||+||||||+||+|+|++||++||+||+++...+
T Consensus       387 PDI~APG~~Ilsa~~~~~~~~~~~~d~~~~~~y~~~SGTSMAaPhVAGvaALlks~~P~~Spa~IksaLmtTA~~~~~~g  466 (649)
T 3i6s_A          387 PDILAPGVLILAAYPPNVFATSIGTNILLSTDYILESGTSMAAPHAAGIAAMLKAAHPEWSPSAIRSAMMTTADPLDNTR  466 (649)
T ss_dssp             CCEEEECSSEEEECCTTSCCEEETTTEEECCSEEEECSHHHHHHHHHHHHHHHHHHSTTCCHHHHHHHHHHTCBCBCTTS
T ss_pred             CeEEeCCCCeEeecCCCCCccccccccccccceecccccccccHHHHHHHHHHHHhCCCCCHHHHHHHHhcccccccCCC
Confidence            9999999999999987543222  111 3368999999999999999999999999999999999999999999876543


Q ss_pred             C--------CC-CCccCCCCCcCccCcCCCceeeeCCchhhHhhhhcCCCCCCcceeecCCCcc--ccCCCCCCccCCCC
Q 043420          531 N--------SD-AEFAYGSGHLNPSMAVNPGLVYDAGELDYVKFLCGQGYSDKNLSLVTGDNRS--CSNSTNATVWDLNY  599 (702)
Q Consensus       531 ~--------~~-~~~~~G~G~in~~~Al~~glv~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~--c~~~~~~~~~~ln~  599 (702)
                      .        .. .++.||+|+||+.+|++||||||.+.+||++|||++||+.++|+.|+++++.  |+.    ...+|||
T Consensus       467 ~~i~~~~~~~~a~~~~~GaG~vn~~~A~~pGLvyd~~~~dy~~flc~~~y~~~~i~~~~~~~~~~~C~~----~~~~lNy  542 (649)
T 3i6s_A          467 KPIKDSDNNKAATPLDMGAGHVDPNRALDPGLVYDATPQDYVNLLCSLNFTEEQFKTIARSSASHNCSN----PSADLNY  542 (649)
T ss_dssp             SBCEETTTSSBCCHHHHTTCBCCHHHHTCCSEECCCCHHHHHHHHHTTCCCHHHHHHHHTTTSCC-CCC----CCCCCCC
T ss_pred             CcccccccCCcCCcCCCCeeeeCHHHhcCccccccCCchhHHHhhhcCCCCcccceeeecCCCcCCCCC----chhhcCC
Confidence            2        12 5789999999999999999999999999999999999999999999998888  975    3679999


Q ss_pred             CeEEEec-CCCCCcc--EEEEEEEEecCCCCeeEEEEEEcCCCeEEEEEcCeEEEeeCCeEEEEEEEEEEeeCCCCCeEE
Q 043420          600 PSFALST-KPGNNTT--QVFHRTVTNVGSAVSTYRAVVYTRPGLMIKVQPSVLYFKSLYQKQSFVVTVTANVGKSVNMIS  676 (702)
Q Consensus       600 ps~~~~~-~~~~~~~--~t~~rtvtnvg~~~~ty~~~~~~~~g~~v~v~p~~l~~~~~g~~~~~~vt~~~~~~~~~~~~~  676 (702)
                      |||++.+ +......  +||+|||||||+..+||+++++.|+|++|+|+|++|+|++.+|+++|+|||+......+.|.|
T Consensus       543 Ps~~~~~~~~~~~~~~~~~~~Rtvtnvg~~~~~y~~~v~~p~g~~v~v~P~~l~f~~~~~~~~f~v~~~~~~~~~~~~~f  622 (649)
T 3i6s_A          543 PSFIALYSIEGNFTLLEQKFKRTVTNVGKGAATYKAKLKAPKNSTISVSPQILVFKNKNEKQSYTLTIRYIGDEGQSRNV  622 (649)
T ss_dssp             SSEEEEECCSSCCCCEEEEEEEEEEECC--CEEEEEEEECCTTEEEEEESSEEEECC-CCEEEEEEEEEECCC---CCCE
T ss_pred             CcEEeecccCCCCccceEEEEEEEEEeCCCCcEEEEEEecCCCCEEEEECCEEEEecCCCEEEEEEEEEecccCCCceEE
Confidence            9999987 4411112  899999999999999999999999999999999999999899999999999986555567899


Q ss_pred             EEEEEEC--CCceEEeEEEEEec
Q 043420          677 ASLVWDD--GVHHVRSPVVAFVA  697 (702)
Q Consensus       677 G~~~~~~--~~~~v~~P~~~~~~  697 (702)
                      |+|+|+|  ++|.||+||+|++.
T Consensus       623 g~l~w~~~~~~h~vrsPi~v~~~  645 (649)
T 3i6s_A          623 GSITWVEQNGNHSVRSPIVTSPI  645 (649)
T ss_dssp             EEEEEEETTSCCEEEEEEEEEEC
T ss_pred             EEEEEEcCCCCeEEEEeEEEEEc
Confidence            9999998  99999999999986
>3vta_A Cucumisin; subtilisin-like fold, serine protease, hydrolase; HET: DFP NAG FUC BMA MAN; 2.75A {Cucumis melo} Back     alignment and structure
>1xf1_A C5A peptidase, SCP; hydrolase; HET: CIT; 1.90A {Streptococcus pyogenes} PDB: 3eif_A* Back     alignment and structure
>3afg_A Subtilisin-like serine protease; propeptide, thermococcus kodakaraensis, hydrolas protease; 2.00A {Thermococcus kodakarensis} Back     alignment and structure
>2z2z_A TK-subtilisin precursor; thermococcus kodakaraensis, hydrolase; 1.87A {Thermococcus kodakarensis} PDB: 2e1p_A 2zwp_A 2zwo_A Back     alignment and structure
>3t41_A Epidermin leader peptide processing serine protea; structural genomics, center for structural genomics of infec diseases, csgid; 1.95A {Staphylococcus aureus} PDB: 3qfh_A Back     alignment and structure
>1y9z_A Alkaline serine protease; subtilisin-like alpha/beta domain, insert beta barrel domain hydrolase; HET: PMS; 1.40A {Pseudoalteromonas SP} PDB: 1v6c_A* 1wvm_A* Back     alignment and structure
>1r6v_A Subtilisin-like serine protease; sandwich domain, propeptide, hydrolase; 1.70A {Fervidobacterium pennivorans} SCOP: c.41.1.1 Back     alignment and structure
>1r0r_E Subtilisin carlsberg; high resolution, serine protease, protein inhibitor, hydrolase; 1.10A {Bacillus licheniformis} SCOP: c.41.1.1 PDB: 1af4_A* 1be8_A* 1bfk_A 1bfu_A 1be6_A 1oyv_A 1cse_E 1sbc_A 1sca_A 1scb_A 1scd_A 2sec_E 2wuv_A 2wuw_E 1yu6_A 1scn_E* 1c3l_A 1avt_A* 1av7_A* 1sel_A ... Back     alignment and structure
>4h6x_A Thiazoline oxidase/subtilisin-like protease; hydrolase; 2.00A {Prochloron didemni} PDB: 4aks_A 4akt_A Back     alignment and structure
>1dbi_A AK.1 serine protease; hydrolase; 1.80A {Bacillus SP} SCOP: c.41.1.1 Back     alignment and structure
>1gci_A Subtilisin; hydrolase, serine protease; 0.78A {Bacillus lentus} SCOP: c.41.1.1 PDB: 1jea_A 1ndq_A 1svn_A 1tk2_A* 3bx1_A 1ah2_A 1iav_A* 1c9m_A* 1wsd_A 1mpt_A 1ndu_A 1c9j_A 1q5p_A* 1st3_A 1c9n_A* Back     alignment and structure
>1to2_E Subtilisin BPN'; serine protease, hydrolase; HET: CIT 15P; 1.30A {Bacillus amyloliquefaciens} SCOP: c.41.1.1 PDB: 1tm1_E* 1tm3_E* 1tm4_E* 1lw6_E* 1tm7_E* 1tmg_E* 1to1_E* 1tm5_E* 1y1k_E* 1y33_E* 1y34_E* 1y3b_E* 1y3c_E* 1y3d_E* 1y3f_E* 1y48_E* 1y4a_E* 1y4d_E 1sup_A* 1sib_E ... Back     alignment and structure
>2p4e_P Proprotein convertase subtilisin/kexin type 9; protease, LDL receptor, LDL, endocytosis, hydrol; 1.98A {Homo sapiens} Back     alignment and structure
>1thm_A Thermitase; hydrolase(serine protease); 1.37A {Thermoactinomyces vulgaris} SCOP: c.41.1.1 PDB: 2tec_E 1tec_E 3tec_E Back     alignment and structure
>2x8j_A Intracellular subtilisin protease; hydrolase, serine protease, intracellular proteinase regulat; HET: CSX 1PE; 1.56A {Bacillus clausii} PDB: 2wv7_A 2wwt_A 2xrm_A* Back     alignment and structure
>4h6w_A N-terminal cyanobactin protease; hydrolase; 2.45A {Planktothrix agardhii nies-596} Back     alignment and structure
>3zxy_A Subtilisin-like protein; hydrolase; 1.58A {Prochloron didemni} PDB: 3zxx_A Back     alignment and structure
>2ixt_A 36KDA protease; serine protease, sphericase, subtilisin like protease, hydrolase; 0.8A {Bacillus sphaericus} SCOP: c.41.1.1 PDB: 3d43_A 1ea7_A* 2gko_A* Back     alignment and structure
>2z30_A TK-subtilisin; thermococcus kodakaraensis, hydrolase; 1.65A {Thermococcus kodakarensis} PDB: 3a3o_A 3a3n_A 2zrq_A 2z57_A 2z56_A 2z58_A 3a3p_A 2z2x_A* 2z2y_A Back     alignment and structure
>2iy9_A SUBA; toxin, shiga, plasmid; 1.8A {Escherichia coli} Back     alignment and structure
>3lpc_A APRB2; protease, subtilase, virulence factor, hydrolase; 1.70A {Dichelobacter nodosus} PDB: 3lpa_A 3lpd_A 3ti9_A 3ti7_A Back     alignment and structure
>1wmd_A Protease; alpha-beta hydrolase fold, jelly-roll beta-barrel, hydrolase; 1.30A {Bacillus SP} SCOP: b.18.1.20 c.41.1.1 PDB: 1wme_A 1wmf_A Back     alignment and structure
>3lxu_X Tripeptidyl-peptidase 2; spindle complex, aminopeptidase, hydrolase, phosphoprotein, protease; 3.14A {Drosophila melanogaster} Back     alignment and structure
>1sh7_A Extracellular subtilisin-like serine proteinase; cold adaptation, psychrotrophic, subtilisin-like proteinase, depentent, hydrolase; HET: PMS; 1.84A {Vibrio SP} PDB: 1s2n_A* Back     alignment and structure
>2b6n_A Proteinase K; S binding, substrate specificity, proteinase K, subtilase, psychrotrophic, psychrophilic, hydrolase; 1.80A {Serratia SP} Back     alignment and structure
>4dzt_A Aqualysin-1, aqualysin-I; serine protease, calcium binding, inhibitor, hydrolase-hydro inhibitor complex; HET: PMS; 1.95A {Thermus aquaticus} Back     alignment and structure
>2pwa_A Proteinase K; structure, alanine boronic acid, hydrolase; 0.83A {Engyodontium album} SCOP: c.41.1.1 PDB: 1p7v_A 1p7w_A 2dqk_A 2duj_A 2g4v_A 2hd4_A 2hpz_A 2id8_A 2pq2_A 1ic6_A 2pwb_A* 2pyz_A* 2v8b_A 3aj8_A 3aj9_A 3dyb_A* 3gt3_A* 3gt4_A* 3l1k_A 3osz_A ... Back     alignment and structure
>1p8j_A Furin precursor; prohormone convertase, SPC1, PACE, P-domain; HET: DKA AR7 NAG FUL BMA MAN GAL FUC; 2.60A {Mus musculus} SCOP: b.18.1.20 c.41.1.1 Back     alignment and structure
>2id4_A Kexin; KEX2, kexin, furin, proprotein, prohormone, convertase, SUBT like protease, serine protease; HET: NDG; 1.90A {Saccharomyces cerevisiae} SCOP: b.18.1.20 c.41.1.1 PDB: 1r64_A* 1ot5_A* Back     alignment and structure
>3f7m_A Alkaline serine protease VER112; verticillium psalliotae, cuticle- degrading protease, nematodes, hydrolase, secreted, zymogen; 1.60A {Lecanicillium psalliotae} SCOP: c.41.1.1 PDB: 3f7o_A Back     alignment and structure
>2qtw_B Proprotein convertase subtilisin/kexin type 9; coronary heart disease, hypercholest low density lipoprotein receptor, autocatalytic cleavage; HET: NAG; 1.90A {Homo sapiens} PDB: 3m0c_B 3bps_A 3gcw_A 3gcx_A 3p5b_A 3p5c_A 2pmw_B 3h42_B 2w2n_A 2w2m_A 2w2p_A 2w2q_A 2xtj_A 2w2o_A Back     alignment and structure
>3hjr_A Extracellular serine protease; kexin, hydrolase; 1.65A {Aeromonas sobria} Back     alignment and structure
>1t1e_A Kumamolisin; proenzyme, prosubtilase, activation mechanism, sedolisin, serine-carboxyl proteinase, hydrolase; 1.18A {Bacillus SP} SCOP: c.41.1.2 d.58.3.2 PDB: 1t1g_A 1t1i_A 1gt9_1 1gtg_1 1gtj_1* 1gtl_1* 1sio_A* 1sn7_A 1zvj_A 1siu_A 1zvk_A Back     alignment and structure
>1ga6_A Serine-carboxyl proteinase; serine-carboxyl proteinase, hydrolase-hydrolase inhibitor CO; 1.00A {Pseudomonas SP} SCOP: c.41.1.2 PDB: 1ga4_A* 1ga1_A 1kdv_A* 1kdy_A* 1kdz_A* 1ke1_A* 1ke2_A* 1nlu_A* Back     alignment and structure
>3edy_A Tripeptidyl-peptidase 1; protease, TPP1, sedolisin, batten disease, lincl, zymogen, P exopeptidase, endopeptidase, S53 family, CLN2; HET: NAG; 1.85A {Homo sapiens} PDB: 3ee6_A* Back     alignment and structure
>2w2n_P Proprotein convertase subtilisin/kexin type 9; hydrolase-receptor complex, PCSK9, proprotein converta low-density lipoprotein receptor, EGF; 2.30A {Homo sapiens} PDB: 2w2m_P 2w2o_P 2w2p_P 2w2q_P 2xtj_P Back     alignment and structure
>3cnq_P Subtilisin BPN'; uncleaved, proenzyme, substrate complex, hydrolase, metal- binding, protease, secreted, serine protease, sporulation; 1.71A {Bacillus amyloliquefaciens} PDB: 3bgo_P 3co0_P 1spb_P 1scj_B Back     alignment and structure
>2qtw_A Proprotein convertase subtilisin/kexin type 9 Pro; coronary heart disease, hypercholest low density lipoprotein receptor, autocatalytic cleavage; HET: NAG; 1.90A {Homo sapiens} PDB: 3m0c_A 2pmw_A 3h42_A 3bps_P 3gcw_P 3gcx_P 3p5b_P 3p5c_P Back     alignment and structure
>3icu_A E3 ubiquitin-protein ligase RNF128; E3 ligase, energy, PA domain, transmembrane,protein turnover conjugation pathway; HET: NAG; 2.10A {Homo sapiens} Back     alignment and structure
>1v5i_B POIA1, IA-1=serine proteinase inhibitor; protease-inhibitor complex, subtilisin, hydrolase-Pro binding complex; 1.50A {Pleurotus ostreatus} SCOP: d.58.3.2 PDB: 1itp_A Back     alignment and structure
>2z30_B TK-subtilisin; thermococcus kodakaraensis, hydrolase; 1.65A {Thermococcus kodakarensis} PDB: 2z2y_B 3a3p_B 2z56_B 2z58_B 2z57_B 3a3n_B 3a3o_B Back     alignment and structure
>2ys4_A Hydrocephalus-inducing protein homolog; hydin, PAPD-like, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Back     alignment and structure
>3iib_A Peptidase M28; YP_926796.1, structural genomics, J center for structural genomics, JCSG, protein structure INI PSI-2; HET: PGE; 1.70A {Shewanella amazonensis SB2B} Back     alignment and structure
>2ek8_A Aminopeptidase; metalloproteinase, hydrolase; 1.80A {Aneurinibacillus SP} PDB: 2ek9_A* Back     alignment and structure
>3qbt_B Inositol polyphosphate 5-phosphatase OCRL-1; protein transport, vesicular trafficking, GTPase, LOWE syndr immunoglobulin fold, RAB8A, endocytosis; HET: GNP; 2.00A {Homo sapiens} Back     alignment and structure
>3lxu_X Tripeptidyl-peptidase 2; spindle complex, aminopeptidase, hydrolase, phosphoprotein, protease; 3.14A {Drosophila melanogaster} Back     alignment and structure
>2r39_A FIXG-related protein; structural GE PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, iron, iron-sulfur; 2.02A {Vibrio parahaemolyticus} Back     alignment and structure
>2e6j_A Hydin protein; PAPD, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Back     alignment and structure
>3kas_A Transferrin receptor protein 1; transferrin receptor 1, arenavirus, cell MEMB disulfide bond, endocytosis, HOST-virus inter receptor, secreted, transmembrane; HET: NAG FUC BMA MAN; 2.40A {Homo sapiens} PDB: 1de4_C* 3s9l_A* 3s9m_A* 3s9n_A* 1cx8_A* 1suv_A 2nsu_A Back     alignment and structure
>3fed_A Glutamate carboxypeptidase III; metallopeptidase, bimetallic active site, N-glycosylation, C cation, chloride anion, zinc IONS, dipept glycoprotein; HET: NAG BIX; 1.29A {Homo sapiens} PDB: 3fec_A* 3fee_A* 3ff3_A* 2c6c_A* 2c6g_A* 2c6p_A* 2cij_A* 2jbj_A* 2jbk_A* 3rbu_A* 3bi1_A* 2oot_A* 2pvv_A* 2pvw_A* 2xei_A* 2or4_A* 3bi0_A* 3bhx_A* 3d7d_A* 3d7f_A* ... Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 702
d1v6ca_435 c.41.1.1 (A:) Alkaline serine protease Apa1 {Pseud 3e-35
d1r6va_671 c.41.1.1 (A:) Fervidolysin {Fervidobacterium penni 1e-14
d1r6va_671 c.41.1.1 (A:) Fervidolysin {Fervidobacterium penni 4e-04
d1r0re_274 c.41.1.1 (E:) Subtilisin {Bacillus subtilis, carls 4e-12
d1gcia_269 c.41.1.1 (A:) Subtilisin {Bacillus lentus [TaxId: 1e-11
d2ixta1309 c.41.1.1 (A:1-309) Sphericase {Bacillus sphaericus 2e-11
d1to2e_281 c.41.1.1 (E:) Subtilisin {Bacillus amyloliquefacie 6e-11
d1to2e_281 c.41.1.1 (E:) Subtilisin {Bacillus amyloliquefacie 3e-05
d1wmda2318 c.41.1.1 (A:1-318) Alkaline serine protease kp-43, 2e-10
d1p8ja2334 c.41.1.1 (A:109-442) Furin, N-terminal domain {Mou 2e-08
d2id4a2339 c.41.1.1 (A:122-460) Kexin, N-terminal domain {Bak 8e-08
d2pwaa1279 c.41.1.1 (A:1-279) Proteinase K {Fungus (Tritirach 2e-06
d1dbia_280 c.41.1.1 (A:) Thermostable serine protease {Bacill 5e-06
d1dbia_280 c.41.1.1 (A:) Thermostable serine protease {Bacill 9e-05
d1thma_279 c.41.1.1 (A:) Thermitase {Thermoactinomyces vulgar 6e-05
>d1v6ca_ c.41.1.1 (A:) Alkaline serine protease Apa1 {Pseudoalteromonas sp. AS-11 [TaxId: 247492]} Length = 435 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: Subtilisin-like
superfamily: Subtilisin-like
family: Subtilases
domain: Alkaline serine protease Apa1
species: Pseudoalteromonas sp. AS-11 [TaxId: 247492]

 Score =  136 bits (343), Expect = 3e-35
 Identities = 68/488 (13%), Positives = 140/488 (28%), Gaps = 82/488 (16%)

Query: 90  TTESDIIVGMLDTGIWPESQSFSDENFGPPPKKWKGSCQTSSNFTCNNKIIGAKFYRSDK 149
           +   +  + ++D+G        +                        N + G     +  
Sbjct: 19  SQAGNRTICIIDSGYDRSHNDLNA-----------------------NNVTGTNNSGTG- 54

Query: 150 KFSPFDFKSPRDSEGHGTHTSSTAAGGLVSKASLFGIGFGTAIGGVPSARIAVYKICWFD 209
                ++  P ++  HGTH + T A              G   G +P+    ++ +  F+
Sbjct: 55  -----NWYQPGNNNAHGTHVAGTIAAI--------ANNEGVV-GVMPNQNANIHIVKVFN 100

Query: 210 GCADADILAAFDDAIADGVDIISISVGSFSAVNYFEDTIAIGSFHAMKKGILTSNSAGNS 269
                   +             +  V      +    T           G+L   +AGN+
Sbjct: 101 EAGWGYSSSLVAAIDTCVNSGGANVVTMSLGGSGSTTTERNALNTHYNNGVLLIAAAGNA 160

Query: 270 GPDAASLANVAPWTLSVAASTVDRKFVTRVKLGNGEVYEGISINTIDYKGKMFPLIYGGD 329
           G  + S        +SVAA   +       +  +        +        +   +  G+
Sbjct: 161 GDSSYSYPASYDSVMSVAAVDSNLDHAAFSQYTD-------QVEISGPGEAILSTVTVGE 213

Query: 330 APNRTGGYQGSNSRFCSLGSLDEKLVQGKIVLCDELNDGFGAATARAVGSVMQGNDDRDV 389
                        R   +    +      +V  + L     +     + +   G      
Sbjct: 214 ------------GRLADITIGGQSYFSNGVVPHNRLTPSGTSYAPAPINASATGALAECT 261

Query: 390 AYSFPLPNSYLDLYDGSKIASYLNSTSIPTATILKSTAEKNEFA-PVVASFSSRGPNPIT 448
                      ++ +   +   + +       I  + A K   A  ++   +S  P    
Sbjct: 262 VNGTSFSCG--NMANKICLVERVGNQGSSYPEINSTKACKTAGAKGIIVYSNSALPGLQN 319

Query: 449 NDIL--KPDLTAPGVDILASWTQASSPSEG------DPRISPFNIISGTSMSCPHATAAA 500
             ++    D+T P V +  +   A     G      +     +   +GTSM+ PH +  A
Sbjct: 320 PFLVDANSDITVPSVSVDRATGLALKAKLGQSTTVSNQGNQDYEYYNGTSMATPHVSGVA 379

Query: 501 AYVKSFYPSWSPAAIKSALMTTATPMSVEANSDAEFAYGSGHLNPSMAVNPGLVYDAGEL 560
             V S++P  S + +++AL  TA  +SV      +   G G +N   A            
Sbjct: 380 TLVWSYHPECSASQVRAALNATADDLSVAGR---DNQTGYGMINAVAA-----------K 425

Query: 561 DYVKFLCG 568
            Y+   C 
Sbjct: 426 AYLDESCT 433
>d1r6va_ c.41.1.1 (A:) Fervidolysin {Fervidobacterium pennivorans [TaxId: 93466]} Length = 671 Back     information, alignment and structure
>d1r6va_ c.41.1.1 (A:) Fervidolysin {Fervidobacterium pennivorans [TaxId: 93466]} Length = 671 Back     information, alignment and structure
>d1r0re_ c.41.1.1 (E:) Subtilisin {Bacillus subtilis, carlsberg [TaxId: 1423]} Length = 274 Back     information, alignment and structure
>d1gcia_ c.41.1.1 (A:) Subtilisin {Bacillus lentus [TaxId: 1467]} Length = 269 Back     information, alignment and structure
>d2ixta1 c.41.1.1 (A:1-309) Sphericase {Bacillus sphaericus [TaxId: 1421]} Length = 309 Back     information, alignment and structure
>d1to2e_ c.41.1.1 (E:) Subtilisin {Bacillus amyloliquefaciens, Novo/BPN' [TaxId: 1390]} Length = 281 Back     information, alignment and structure
>d1to2e_ c.41.1.1 (E:) Subtilisin {Bacillus amyloliquefaciens, Novo/BPN' [TaxId: 1390]} Length = 281 Back     information, alignment and structure
>d1wmda2 c.41.1.1 (A:1-318) Alkaline serine protease kp-43, N-terminal domain {Bacillus sp. KSM-KP43 [TaxId: 109322]} Length = 318 Back     information, alignment and structure
>d1p8ja2 c.41.1.1 (A:109-442) Furin, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} Length = 334 Back     information, alignment and structure
>d2id4a2 c.41.1.1 (A:122-460) Kexin, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 339 Back     information, alignment and structure
>d2pwaa1 c.41.1.1 (A:1-279) Proteinase K {Fungus (Tritirachium album), strain limber [TaxId: 37998]} Length = 279 Back     information, alignment and structure
>d1dbia_ c.41.1.1 (A:) Thermostable serine protease {Bacillus sp., AK.1 [TaxId: 1409]} Length = 280 Back     information, alignment and structure
>d1dbia_ c.41.1.1 (A:) Thermostable serine protease {Bacillus sp., AK.1 [TaxId: 1409]} Length = 280 Back     information, alignment and structure
>d1thma_ c.41.1.1 (A:) Thermitase {Thermoactinomyces vulgaris [TaxId: 2026]} Length = 279 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query702
d1r6va_671 Fervidolysin {Fervidobacterium pennivorans [TaxId: 100.0
d1dbia_280 Thermostable serine protease {Bacillus sp., AK.1 [ 100.0
d1r0re_274 Subtilisin {Bacillus subtilis, carlsberg [TaxId: 1 100.0
d1v6ca_435 Alkaline serine protease Apa1 {Pseudoalteromonas s 100.0
d1to2e_281 Subtilisin {Bacillus amyloliquefaciens, Novo/BPN' 100.0
d1thma_279 Thermitase {Thermoactinomyces vulgaris [TaxId: 202 100.0
d1gcia_269 Subtilisin {Bacillus lentus [TaxId: 1467]} 100.0
d2ixta1309 Sphericase {Bacillus sphaericus [TaxId: 1421]} 100.0
d1wmda2318 Alkaline serine protease kp-43, N-terminal domain 100.0
d2pwaa1279 Proteinase K {Fungus (Tritirachium album), strain 100.0
d1p8ja2334 Furin, N-terminal domain {Mouse (Mus musculus) [Ta 100.0
d2id4a2339 Kexin, N-terminal domain {Baker's yeast (Saccharom 100.0
d1t1ga_357 Serine-carboxyl proteinase, SCP {Bacillus novosp. 99.96
d1ga6a_369 Serine-carboxyl proteinase, SCP {Pseudomonas sp., 99.94
d1scjb_71 Subtilisin prosegment {Bacillus subtilis [TaxId: 1 97.67
d1v5ib172 Proteinase A inhibitor 1, POIA1 {Oyster mushroom ( 96.94
d1w8oa1103 Sialidase, "linker" domain {Micromonospora viridif 96.28
d1de4c2193 Transferrin receptor ectodomain, apical domain {Hu 92.82
d3bi1a2233 Glutamate carboxypeptidase II {Human (Homo sapiens 85.9
>d1r6va_ c.41.1.1 (A:) Fervidolysin {Fervidobacterium pennivorans [TaxId: 93466]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: Subtilisin-like
superfamily: Subtilisin-like
family: Subtilases
domain: Fervidolysin
species: Fervidobacterium pennivorans [TaxId: 93466]

Probab=100.00  E-value=3.8e-51  Score=472.14  Aligned_cols=336  Identities=24%  Similarity=0.288  Sum_probs=252.3

Q ss_pred             CcEEEEecceeeEEEEEeCHHH----HHHH--hcCCCeEEEEeCceeccccC----------------------------
Q 043420           29 DHLLHSYHRSFNGFVAKLTHDE----AQRL--KGMQGVMSVFPNGKKQLHTT----------------------------   74 (702)
Q Consensus        29 ~~~~~~y~~~~ng~s~~l~~~~----~~~l--~~~p~V~~v~~~~~~~~~~~----------------------------   74 (702)
                      .++++.+ ..++.+.++++...    .+.+  ..+|+|++|+|+...++...                            
T Consensus        53 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~vep~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  131 (671)
T d1r6va_          53 GKVVLEL-PQIKVVSIKLNGMTVKQAYDKIKALALKGIRYVEPSYKRELIKPTVVKPNPDMYKIRKPGLNSTARDYGEEL  131 (671)
T ss_dssp             CEEEEEE-GGGTEEEEECSSCCHHHHHHHHTTSCCSSEEEEECCBCCEECCCEECCCCTTTTCSSSSCCSSSTTCCSSTT
T ss_pred             CEEEEEe-cccceEEEEcCchhHHHHHHHHHHhcCCCceEECcceeEeeccccccCCCccccccccccccccccCcCccc
Confidence            4666777 56677888876432    2222  35799999999865443210                            


Q ss_pred             --CCcc--ccCchhhcccCCCCCCcEEEEeccCCCCCCCCCCCCCCCCCCCCccccccCCCCcccCceeEeeeecccCCC
Q 043420           75 --RSWD--FMGFSEHVKRATTESDIIVGMLDTGIWPESQSFSDENFGPPPKKWKGSCQTSSNFTCNNKIIGAKFYRSDKK  150 (702)
Q Consensus        75 --~s~~--~~g~~~~w~~~~~G~gV~VgVIDtGid~~Hp~f~d~~~~~~~~~w~g~~~~~~~~~~n~kiig~~~~~~~~~  150 (702)
                        ..|.  .++++++|....+|+||+|||||||||++||+|.+.                        ++..+++..+..
T Consensus       132 ~~~~w~l~~i~~~~a~~~~~tG~gV~VaViDtGvd~~Hpdl~~~------------------------~~~~~~~~~~~~  187 (671)
T d1r6va_         132 SNELWGLEAIGVTQQLWEEASGTNIIVAVVDTGVDGTHPDLEGQ------------------------VIAGYRPAFDEE  187 (671)
T ss_dssp             GGGCHHHHHTTCCHHHHHHCSCTTCEEEEEESCCBTTSGGGTTT------------------------BCCEEEGGGTEE
T ss_pred             cccCcChhhcCccHHHHhcCCCCCCEEEEEcCCcCCCChhhcCC------------------------cccCccccccCC
Confidence              0111  144445555567999999999999999999999853                        222222221110


Q ss_pred             CCCCCCCCCCCCCCChhHHHHHhccCCCCCCcccccccceeeecccCCeEEEEEEecC------CC-CCHHHHHHHHHHH
Q 043420          151 FSPFDFKSPRDSEGHGTHTSSTAAGGLVSKASLFGIGFGTAIGGVPSARIAVYKICWF------DG-CADADILAAFDDA  223 (702)
Q Consensus       151 ~~~~~~~~~~D~~gHGThVAgiaaG~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~------~g-~~~~~i~~ai~~A  223 (702)
                      .+  ...++.|..||||||||||||+...    .|     +.||||+|+|+++|+++.      .+ ...+.+++||+||
T Consensus       188 ~~--~~~~~~d~~gHGT~VAGiiaa~~~~----~g-----~~GvAp~a~l~~~rv~~~~~~~~~~g~~~~~~i~~ai~~a  256 (671)
T d1r6va_         188 LP--AGTDSSYGGSAGTHVAGTIAAKKDG----KG-----IVGVAPGAKIMPIVIFDDPALVGGNGYVGDDYVAAGIIWA  256 (671)
T ss_dssp             EC--TTCBCCTTCSHHHHHHHHHHCCCSS----SS-----CCCSCTTSEEEEEESBCCHHHHCTTSBCCHHHHHHHHHHH
T ss_pred             CC--CCCcCcccCCCCccccceeeeeccc----cc-----eeeecCcceEEEEEecccccccCCCCcccHHHHHHHHHHH
Confidence            00  1234557889999999999997521    12     289999999999999864      23 5677899999999


Q ss_pred             HHCCCCEEEEeecCCCCCCCccCHHHHHHHHHHhCCCEEEEccCCCCCCC-CCcCCCCCceEEeeeeccCcceeeEEEeC
Q 043420          224 IADGVDIISISVGSFSAVNYFEDTIAIGSFHAMKKGILTSNSAGNSGPDA-ASLANVAPWTLSVAASTVDRKFVTRVKLG  302 (702)
Q Consensus       224 ~~~gvdVIn~SlG~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~-~~~~~~a~~vitVgA~~~~~~~~~~~~~~  302 (702)
                      +++|++|||||||+..    ....+..++..+.++|+++|+||||++... ...+...|++|+|||++....        
T Consensus       257 ~~~g~~Vin~S~g~~~----~~~~~~~ai~~a~~~gv~vV~aAGN~~~~~~~~~Pa~~~~vi~Vga~~~~~~--------  324 (671)
T d1r6va_         257 TDHGAKVMNHSWGGWG----YSYTMKEAFDYAMEHGVVMVVSAGNNTSDSHHQYPAGYPGVIQVAALDYYGG--------  324 (671)
T ss_dssp             HHTTCSEEEECEEBSC----CCHHHHHHHHHHHHTTCEEEEECCSCSSSCCCCBTTTSTTCEEEEEEEEETT--------
T ss_pred             HhCCCcEEeccccccc----CChHHHHHHHHHHhccCcEEEEEecCCCCccccCCccCCceEEEEEecCCCC--------
Confidence            9999999999999872    345677888899999999999999998754 455677899999999764310        


Q ss_pred             CCeEEeeEeecccCCCCceeeEEEcCCCCCCCCCCCCCCCCccCCCCCCccCcCCeEEEEeecchhhhhhhcCceEEEEe
Q 043420          303 NGEVYEGISINTIDYKGKMFPLIYGGDAPNRTGGYQGSNSRFCSLGSLDEKLVQGKIVLCDELNDGFGAATARAVGSVMQ  382 (702)
Q Consensus       303 ~g~~~~g~~~~~~~~~~~~~~lv~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~~~~~~~~~~aGa~g~i~~  382 (702)
                                                                                                      
T Consensus       325 --------------------------------------------------------------------------------  324 (671)
T d1r6va_         325 --------------------------------------------------------------------------------  324 (671)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             eCCCCCCCcccCcceEEecchhHHHHHHHHhcCCCcEEEEeccccccccCCCcccccCCCCCCCCCCCCCCCcEEeCCCc
Q 043420          383 GNDDRDVAYSFPLPNSYLDLYDGSKIASYLNSTSIPTATILKSTAEKNEFAPVVASFSSRGPNPITNDILKPDLTAPGVD  462 (702)
Q Consensus       383 ~~~~~~~~~~~~~p~~~i~~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~a~fSS~Gp~~~~~~~lKPDI~APG~~  462 (702)
                                                                        ...++.||+|||..        ||+|||++
T Consensus       325 --------------------------------------------------~~~~a~fS~~g~~~--------dv~APG~~  346 (671)
T d1r6va_         325 --------------------------------------------------TFRVAGFSSRSDGV--------SVGAPGVT  346 (671)
T ss_dssp             --------------------------------------------------EEEECSSSCCCTTE--------EEEEECSS
T ss_pred             --------------------------------------------------cceeeeccCCCCCc--------eEEecCCC
Confidence                                                              02468999999986        99999999


Q ss_pred             EEeeccCCCCCCC-------CCCCCCCceEeccccchhHHHHHHHHHHHHhCCCCCHHHHHHHHHhcCcCCCCCCCCCCC
Q 043420          463 ILASWTQASSPSE-------GDPRISPFNIISGTSMSCPHATAAAAYVKSFYPSWSPAAIKSALMTTATPMSVEANSDAE  535 (702)
Q Consensus       463 I~sa~~~~~~~~~-------~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~P~lsp~~ik~~L~~TA~~~~~~~~~~~~  535 (702)
                      |+++++.......       .......|..++|||||||||||++|||+|++|+|+++|||++|++||+++...+   .+
T Consensus       347 i~st~~~~~~~~~~~~~~~~~~~~~~~y~~~sGTS~AaP~VaG~aALl~~~~p~lt~~~v~~~L~~tA~~~~~~g---~~  423 (671)
T d1r6va_         347 ILSTVPGEDSIGYEGHNENVPATNGGTYDYYQGTSMAAPHVTGVVAVLLQKFPNAKPWQIRKLLENTAFDFNGNG---WD  423 (671)
T ss_dssp             EEEECCCTTSTTCCCCCTTCCCSSSCCEEEEESHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHCBCSSSSS---CB
T ss_pred             eEeecCCCCccccccccccccccCCCeeeeecCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHhhCccCCCCC---CC
Confidence            9999875432211       1223467999999999999999999999999999999999999999999887654   46


Q ss_pred             ccCCCCCcCccCcCCCce
Q 043420          536 FAYGSGHLNPSMAVNPGL  553 (702)
Q Consensus       536 ~~~G~G~in~~~Al~~gl  553 (702)
                      ..||||+||+.+||+..+
T Consensus       424 ~~~G~G~vna~~Av~~~~  441 (671)
T d1r6va_         424 HDTGYGLVKLDAALQGPL  441 (671)
T ss_dssp             TTTBTCBCCHHHHHHCCC
T ss_pred             CCcccChhCHHHHhhCcC
Confidence            789999999999997544
>d1dbia_ c.41.1.1 (A:) Thermostable serine protease {Bacillus sp., AK.1 [TaxId: 1409]} Back     information, alignment and structure
>d1r0re_ c.41.1.1 (E:) Subtilisin {Bacillus subtilis, carlsberg [TaxId: 1423]} Back     information, alignment and structure
>d1v6ca_ c.41.1.1 (A:) Alkaline serine protease Apa1 {Pseudoalteromonas sp. AS-11 [TaxId: 247492]} Back     information, alignment and structure
>d1to2e_ c.41.1.1 (E:) Subtilisin {Bacillus amyloliquefaciens, Novo/BPN' [TaxId: 1390]} Back     information, alignment and structure
>d1thma_ c.41.1.1 (A:) Thermitase {Thermoactinomyces vulgaris [TaxId: 2026]} Back     information, alignment and structure
>d1gcia_ c.41.1.1 (A:) Subtilisin {Bacillus lentus [TaxId: 1467]} Back     information, alignment and structure
>d2ixta1 c.41.1.1 (A:1-309) Sphericase {Bacillus sphaericus [TaxId: 1421]} Back     information, alignment and structure
>d1wmda2 c.41.1.1 (A:1-318) Alkaline serine protease kp-43, N-terminal domain {Bacillus sp. KSM-KP43 [TaxId: 109322]} Back     information, alignment and structure
>d2pwaa1 c.41.1.1 (A:1-279) Proteinase K {Fungus (Tritirachium album), strain limber [TaxId: 37998]} Back     information, alignment and structure
>d1p8ja2 c.41.1.1 (A:109-442) Furin, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d2id4a2 c.41.1.1 (A:122-460) Kexin, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1t1ga_ c.41.1.2 (A:) Serine-carboxyl proteinase, SCP {Bacillus novosp. MN-32, kumamolisin [TaxId: 198803]} Back     information, alignment and structure
>d1ga6a_ c.41.1.2 (A:) Serine-carboxyl proteinase, SCP {Pseudomonas sp., sedolisin [TaxId: 306]} Back     information, alignment and structure
>d1scjb_ d.58.3.2 (B:) Subtilisin prosegment {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1v5ib1 d.58.3.2 (B:1-72) Proteinase A inhibitor 1, POIA1 {Oyster mushroom (Pleurotus ostreatus) [TaxId: 5322]} Back     information, alignment and structure
>d1w8oa1 b.1.18.2 (A:403-505) Sialidase, "linker" domain {Micromonospora viridifaciens [TaxId: 1881]} Back     information, alignment and structure
>d1de4c2 c.8.4.1 (C:190-382) Transferrin receptor ectodomain, apical domain {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d3bi1a2 c.8.4.1 (A:118-350) Glutamate carboxypeptidase II {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure