Citrus Sinensis ID: 043520


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------16
MNVILVFVTALSVQISLTKADDKPTYIYHNCPSKNFTPNSAYQSNLNLLLSTLRSNATRGSSDKFSKGFYNTTTGHEPNKVYGLFLCRGDFGAETCQNCVSVATSDTAQLCPFGKENTIGYEECLLRYSNISFFSVLDTSVRLSQWNVENSPSRSFDQF
ccHHHHHHHHHHHHHHHcccccccccccccccccccccccHHHHHHHHHHHHHHHHccccccccccccEEEcccccccccEEEEEEccccccHHHHHHHHHHHHHHHHHHcccccEEEEEcccEEEEEcccccccccccccEEEEcccccccccccccc
ccHHHHHHHHHHHHHHHHHHccccccccccccccccccccHHHHHHHHHHHHcHHcccccccccccccEEEccccccccEEEEEEEEcccccHHHHHHHHHHHHHHHHHHccccccEEEEEccEEEEEccccHHccccccccEEEEccccccccccccc
MNVILVFVTALSVQIsltkaddkptyiyhncpsknftpnsaYQSNLNLLLSTLrsnatrgssdkfskgfyntttghepnkvyglflcrgdfgaetcqncvsvatsdtaqlcpfgkentigyeecllrysnisffSVLDTSVrlsqwnvenspsrsfdqf
MNVILVFVTALSVQIsltkaddkptyIYHNCPSKNFTPNSAYQSNLNLLLSTLRSNATRGSSDKFSKGFYNTTTGHEPNKVYGLFLCRGDFGAETCQNCVSVATsdtaqlcpfgKENTIGYEECLLRYSNISFFSVLDTSVRlsqwnvenspsrsfdqf
MNVILVFVTALSVQISLTKADDKPTYIYHNCPSKNFTPNSAYQsnlnlllstlrsnATRGSSDKFSKGFYNTTTGHEPNKVYGLFLCRGDFGAETCQNCVSVATSDTAQLCPFGKENTIGYEECLLRYSNISFFSVLDTSVRLSQWNVENSPSRSFDQF
**VILVFVTALSVQISLTKADDKPTYIYHNCPSKNFTPNSAYQSNLNLLLST***************GFYNTTTGHEPNKVYGLFLCRGDFGAETCQNCVSVATSDTAQLCPFGKENTIGYEECLLRYSNISFFSVLDTSVRLSQWN************
MNVILVFVTALSVQISLTKADDKPTYIYHNCPSKNFTPNSAYQSNLNLLLSTLRSNATRGSSDKFSKGFYNTTTGHEPNKVYGLFLCRGDFGAETCQNCVSVATSDTAQLCPFGKENTIGYEECLLRYSNISFFSVLDTSVRLSQWN**********QF
MNVILVFVTALSVQISLTKADDKPTYIYHNCPSKNFTPNSAYQSNLNLLLSTLRSNATRGSSDKFSKGFYNTTTGHEPNKVYGLFLCRGDFGAETCQNCVSVATSDTAQLCPFGKENTIGYEECLLRYSNISFFSVLDTSVRLSQWNV***********
MNVILVFVTALSVQISLTKADDKPTYIYHNCPSKNFTPNSAYQSNLNLLLSTLRSNATRGSSDKFSKGFYNTTTGHEPNKVYGLFLCRGDFGAETCQNCVSVATSDTAQLCPFGKENTIGYEECLLRYSNISFFSVLDTSVRLSQWNVEN*********
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiii
SSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MNVILVFVTALSVQISLTKADDKPTYIYHNCPSKNFTPNSAYQSNLNLLLSTLRSNATRGSSDKFSKGFYNTTTGHEPNKVYGLFLCRGDFGAETCQNCVSVATSDTAQLCPFGKENTIGYEECLLRYSNISFFSVLDTSVRLSQWNVENSPSRSFDQF
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query159 2.2.26 [Sep-21-2011]
Q8GYA4 669 Cysteine-rich receptor-li yes no 0.811 0.192 0.459 1e-24
O65482 830 Putative cysteine-rich re no no 0.874 0.167 0.431 7e-23
Q9SYB1 341 Cysteine-rich repeat secr no no 0.685 0.319 0.457 6e-22
O65468 676 Cysteine-rich receptor-li no no 0.823 0.193 0.402 8e-21
Q5Q0E2 324 Cysteine-rich repeat secr no no 0.773 0.379 0.366 1e-20
Q9M0X5 675 Cysteine-rich receptor-li no no 0.654 0.154 0.456 3e-20
O65479 666 Putative cysteine-rich re no no 0.874 0.208 0.372 1e-19
Q9C5S8 659 Cysteine-rich receptor-li no no 0.817 0.197 0.389 1e-19
Q8GWJ7 645 Cysteine-rich receptor-li no no 0.880 0.217 0.386 7e-19
Q9LZU4 676 Cysteine-rich receptor-li no no 0.811 0.190 0.366 4e-18
>sp|Q8GYA4|CRK10_ARATH Cysteine-rich receptor-like protein kinase 10 OS=Arabidopsis thaliana GN=CRK10 PE=1 SV=3 Back     alignment and function desciption
 Score =  111 bits (278), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 62/135 (45%), Positives = 80/135 (59%), Gaps = 6/135 (4%)

Query: 24  PTYIYHNCP-SKNFTPNSAYQSNLNLLLSTLRSNATRGSSDKFSKGFYNTTTGHEPNKVY 82
           PTY+YH C  + N+T NS Y +NL  LL++L S   R +S  +S GF N T G  P++V 
Sbjct: 37  PTYVYHTCQNTANYTSNSTYNNNLKTLLASLSS---RNAS--YSTGFQNATVGQAPDRVT 91

Query: 83  GLFLCRGDFGAETCQNCVSVATSDTAQLCPFGKENTIGYEECLLRYSNISFFSVLDTSVR 142
           GLF CRGD   E C+ CVS A +DT   CP  KE T+ Y+EC+LRYSN +  S L T+  
Sbjct: 92  GLFNCRGDVSTEVCRRCVSFAVNDTLTRCPNQKEATLYYDECVLRYSNQNILSTLITTGG 151

Query: 143 LSQWNVENSPSRSFD 157
           +   N  N  S   D
Sbjct: 152 VILVNTRNVTSNQLD 166





Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 7EC: .EC: 1EC: 1EC: .EC: -
>sp|O65482|CRK23_ARATH Putative cysteine-rich receptor-like protein kinase 23 OS=Arabidopsis thaliana GN=CRK23 PE=2 SV=1 Back     alignment and function description
>sp|Q9SYB1|CRR1_ARATH Cysteine-rich repeat secretory protein 1 OS=Arabidopsis thaliana GN=CRRSP1 PE=2 SV=3 Back     alignment and function description
>sp|O65468|CRK8_ARATH Cysteine-rich receptor-like protein kinase 8 OS=Arabidopsis thaliana GN=CRK8 PE=2 SV=2 Back     alignment and function description
>sp|Q5Q0E2|CRR9_ARATH Cysteine-rich repeat secretory protein 9 OS=Arabidopsis thaliana GN=CRRSP9 PE=2 SV=1 Back     alignment and function description
>sp|Q9M0X5|CRK25_ARATH Cysteine-rich receptor-like protein kinase 25 OS=Arabidopsis thaliana GN=CRK25 PE=2 SV=1 Back     alignment and function description
>sp|O65479|CRK20_ARATH Putative cysteine-rich receptor-like protein kinase 20 OS=Arabidopsis thaliana GN=CRK20 PE=2 SV=2 Back     alignment and function description
>sp|Q9C5S8|CRK5_ARATH Cysteine-rich receptor-like protein kinase 5 OS=Arabidopsis thaliana GN=CRK5 PE=1 SV=1 Back     alignment and function description
>sp|Q8GWJ7|CRK19_ARATH Cysteine-rich receptor-like protein kinase 19 OS=Arabidopsis thaliana GN=CRK19 PE=2 SV=2 Back     alignment and function description
>sp|Q9LZU4|CRK4_ARATH Cysteine-rich receptor-like protein kinase 4 OS=Arabidopsis thaliana GN=CRK4 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query159
359474717 663 PREDICTED: cysteine-rich receptor-like p 0.779 0.187 0.503 6e-28
224100081 468 predicted protein [Populus trichocarpa] 0.817 0.277 0.477 3e-27
255555021 686 ATP binding protein, putative [Ricinus c 0.905 0.209 0.434 2e-25
255555031 674 ATP binding protein, putative [Ricinus c 0.767 0.181 0.426 2e-24
359496581 666 PREDICTED: cysteine-rich receptor-like p 0.924 0.220 0.418 1e-23
296088180 699 unnamed protein product [Vitis vinifera] 0.924 0.210 0.412 1e-23
30686087 669 cysteine-rich receptor-like protein kina 0.811 0.192 0.459 8e-23
13506745 658 receptor-like protein kinase 4 [Arabidop 0.811 0.196 0.459 8e-23
3021270 633 serine/threonine kinase-like protein [Ar 0.811 0.203 0.459 9e-23
24417476 658 unknown [Arabidopsis thaliana] 0.811 0.196 0.459 1e-22
>gi|359474717|ref|XP_002267916.2| PREDICTED: cysteine-rich receptor-like protein kinase 25-like isoform 1 [Vitis vinifera] Back     alignment and taxonomy information
 Score =  129 bits (323), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 67/133 (50%), Positives = 87/133 (65%), Gaps = 9/133 (6%)

Query: 21  DDKPTYIYHNCP-SKNFTPNSAYQSNLNLLLSTLRSNATRGSSDKFSKGFYNTTTGHEPN 79
           +  P Y+YH CP +  F PNS+Y++NLN  LS+L SNATR +      GFYN T G  P 
Sbjct: 19  ESAPGYLYHICPNTTTFNPNSSYETNLNFALSSLSSNATRDT------GFYNVTAGRTPP 72

Query: 80  KV-YGLFLCRGDFGAETCQNCVSVATSDTA-QLCPFGKENTIGYEECLLRYSNISFFSVL 137
            V YGLFLCRGD  ++ CQ+CV+ A ++T  Q C   K+  I Y+EC+LRYSN SFFS +
Sbjct: 73  DVAYGLFLCRGDVTSQVCQDCVATAVNETVRQRCRGFKQAIIWYDECMLRYSNESFFSQV 132

Query: 138 DTSVRLSQWNVEN 150
             S R+S WN +N
Sbjct: 133 SESPRVSMWNTQN 145




Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224100081|ref|XP_002334411.1| predicted protein [Populus trichocarpa] gi|222872074|gb|EEF09205.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|255555021|ref|XP_002518548.1| ATP binding protein, putative [Ricinus communis] gi|223542393|gb|EEF43935.1| ATP binding protein, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|255555031|ref|XP_002518553.1| ATP binding protein, putative [Ricinus communis] gi|223542398|gb|EEF43940.1| ATP binding protein, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|359496581|ref|XP_002270035.2| PREDICTED: cysteine-rich receptor-like protein kinase 10-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|296088180|emb|CBI35672.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|30686087|ref|NP_567679.2| cysteine-rich receptor-like protein kinase 10 [Arabidopsis thaliana] gi|334302916|sp|Q8GYA4.3|CRK10_ARATH RecName: Full=Cysteine-rich receptor-like protein kinase 10; Short=Cysteine-rich RLK10; AltName: Full=Receptor-like protein kinase 4; Flags: Precursor gi|26450601|dbj|BAC42412.1| putative receptor-like protein kinase 4 RLK4 [Arabidopsis thaliana] gi|29029020|gb|AAO64889.1| At4g23180 [Arabidopsis thaliana] gi|332659319|gb|AEE84719.1| cysteine-rich receptor-like protein kinase 10 [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|13506745|gb|AAK28315.1|AF224705_1 receptor-like protein kinase 4 [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|3021270|emb|CAA18465.1| serine/threonine kinase-like protein [Arabidopsis thaliana] gi|7269165|emb|CAB79273.1| serine/threonine kinase-like protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|24417476|gb|AAN60348.1| unknown [Arabidopsis thaliana] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query159
TAIR|locus:2121676 669 CRK10 "cysteine-rich RLK (RECE 0.918 0.218 0.388 4.4e-22
TAIR|locus:2121626 830 CRK23 "cysteine-rich RLK (RECE 0.861 0.165 0.381 9.4e-20
TAIR|locus:2121686 645 CRK19 "cysteine-rich RLK (RECE 0.968 0.238 0.337 9.7e-20
TAIR|locus:2121651 676 CRK8 "cysteine-rich RLK (RECEP 0.955 0.224 0.337 2.2e-19
TAIR|locus:2121666 265 EP1 "AT4G23170" [Arabidopsis t 0.955 0.573 0.347 5.1e-19
TAIR|locus:2195778 341 AT1G61750 "AT1G61750" [Arabido 0.685 0.319 0.406 8.5e-19
TAIR|locus:2031341 324 AT1G63550 [Arabidopsis thalian 0.805 0.395 0.359 3.6e-18
TAIR|locus:2077147 676 CRK4 "cysteine-rich RLK (RECEP 0.811 0.190 0.338 4.4e-18
TAIR|locus:2031311 284 AT1G63570 "AT1G63570" [Arabido 0.811 0.454 0.306 1.8e-16
TAIR|locus:2095662252 AT3G22060 "AT3G22060" [Arabido 0.880 0.555 0.286 2.3e-16
TAIR|locus:2121676 CRK10 "cysteine-rich RLK (RECEPTOR-like protein kinase) 10" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 266 (98.7 bits), Expect = 4.4e-22, P = 4.4e-22
 Identities = 59/152 (38%), Positives = 78/152 (51%)

Query:     7 FVTALSVQISLTKADDKPTYIYHNCPSK-NFTPNSAYQXXXXXXXXXXXXXATRGSSDKF 65
             F+   S   S   +   PTY+YH C +  N+T NS Y              ++R +S  +
Sbjct:    20 FLFLFSFLTSFRVSAQDPTYVYHTCQNTANYTSNSTYNNNLKTLLASL---SSRNAS--Y 74

Query:    66 SKGFYNTTTGHEPNKVYGLFLCRGDFGAETCQNCVSVATSDTAQLCPFGKENTIGYEECL 125
             S GF N T G  P++V GLF CRGD   E C+ CVS A +DT   CP  KE T+ Y+EC+
Sbjct:    75 STGFQNATVGQAPDRVTGLFNCRGDVSTEVCRRCVSFAVNDTLTRCPNQKEATLYYDECV 134

Query:   126 LRYSNISFFSVLDTSVRLSQWNVENSPSRSFD 157
             LRYSN +  S L T+  +   N  N  S   D
Sbjct:   135 LRYSNQNILSTLITTGGVILVNTRNVTSNQLD 166




GO:0004672 "protein kinase activity" evidence=IEA
GO:0004674 "protein serine/threonine kinase activity" evidence=IEA
GO:0004713 "protein tyrosine kinase activity" evidence=IEA
GO:0005524 "ATP binding" evidence=IEA
GO:0006468 "protein phosphorylation" evidence=IEA
GO:0016301 "kinase activity" evidence=ISS
GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA
GO:0005886 "plasma membrane" evidence=IDA
GO:0006995 "cellular response to nitrogen starvation" evidence=RCA
TAIR|locus:2121626 CRK23 "cysteine-rich RLK (RECEPTOR-like protein kinase) 23" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2121686 CRK19 "cysteine-rich RLK (RECEPTOR-like protein kinase) 19" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2121651 CRK8 "cysteine-rich RLK (RECEPTOR-like protein kinase) 8" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2121666 EP1 "AT4G23170" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2195778 AT1G61750 "AT1G61750" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2031341 AT1G63550 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2077147 CRK4 "cysteine-rich RLK (RECEPTOR-like protein kinase) 4" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2031311 AT1G63570 "AT1G63570" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2095662 AT3G22060 "AT3G22060" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Your Input:
GSVIVG00001153001
SubName- Full=Chromosome chr2 scaffold_113, whole genome shotgun sequence; (663 aa)
(Vitis vinifera)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query159
pfam01657106 pfam01657, Stress-antifung, Salt stress response/a 5e-28
>gnl|CDD|216632 pfam01657, Stress-antifung, Salt stress response/antifungal Back     alignment and domain information
 Score = 99.8 bits (249), Expect = 5e-28
 Identities = 46/110 (41%), Positives = 61/110 (55%), Gaps = 8/110 (7%)

Query: 28  YHNCPSKN----FTPNSAYQSNLNLLLSTLRSNATRGSSDKFSKGFYNTTTGHEPNKVYG 83
           +H C S       T NS ++SNLN LLS+L SNA    +    KGF   T+G  P+ VYG
Sbjct: 1   FHLCSSNTSGNYTTANSTFESNLNALLSSLSSNA----ASSSGKGFAAGTSGAAPDTVYG 56

Query: 84  LFLCRGDFGAETCQNCVSVATSDTAQLCPFGKENTIGYEECLLRYSNISF 133
           L  CRGD  A  C++C++ A S+  + CP  K   I Y+ C LRY +  F
Sbjct: 57  LAQCRGDLSASDCRSCLATAVSELRRCCPNKKGGRIWYDSCFLRYESYPF 106


This domain is often found in association with the kinase domains pfam00069 or pfam07714. In many proteins it is duplicated. It contains six conserved cysteines which are involved in disulphide bridges. It has a role in salt stress response and has antifungal activity. Length = 106

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 159
PF01657106 Stress-antifung: Salt stress response/antifungal; 99.95
>PF01657 Stress-antifung: Salt stress response/antifungal; InterPro: IPR002902 This domain is found in plants and has no known function Back     alignment and domain information
Probab=99.95  E-value=8.2e-29  Score=176.11  Aligned_cols=102  Identities=42%  Similarity=0.841  Sum_probs=77.8

Q ss_pred             ccCCC-C--CCc-CCCcHHHHHHHHHHHHHHHHhccCCCCccccCeeeeecCCCCCeeEEeccccCCCCccchHHHHHHH
Q 043520           28 YHNCP-S--KNF-TPNSAYQSNLNLLLSTLRSNATRGSSDKFSKGFYNTTTGHEPNKVYGLFLCRGDFGAETCQNCVSVA  103 (159)
Q Consensus        28 ~~~C~-~--~~~-~~~s~f~~~l~~ll~~L~~~a~~~~~~~~~~~f~~~~~g~~~~~vYglaqC~~Dls~~~C~~Cl~~a  103 (159)
                      |+.|+ +  +++ +++++|+.+++.+|..|+..++...+    .+|++++.|.+++++|||+||++|+++++|+.||+.+
T Consensus         1 ~~~Cs~~~~~~~~~~~~~f~~~l~~ll~~l~~~a~~~~~----~~f~~~~~~~~~~~vYgl~qC~~Dls~~dC~~Cl~~a   76 (106)
T PF01657_consen    1 WHFCSSNTNNNYTTDNSTFEQNLNSLLSSLVSNAASSSS----KGFATGSAGSGPDTVYGLAQCRGDLSPSDCRACLADA   76 (106)
T ss_dssp             ---E---SSB----TT-THHHHHHHHHHHHHHHGGGTT-----TEEEEEE--ST---EEEEEEE-TTS-HHHHHHHHHHH
T ss_pred             CCcCCCCCCCCcCCCCchHHHHHHHHHHHHHHHHhhccc----cCcEEeecCCCCCeEEEEEEcCCCCChhhhHHHHHHH
Confidence            78899 3  566 57888999999999999999875421    5899998888889999999999999999999999999


Q ss_pred             HHHhhhhCCCCceEEEEcCceEEEEcCccc
Q 043520          104 TSDTAQLCPFGKENTIGYEECLLRYSNISF  133 (159)
Q Consensus       104 ~~~~~~~C~~~~ga~i~~~~C~lRYs~~~F  133 (159)
                      +..++++|++++||+||+++|+||||+++|
T Consensus        77 ~~~~~~~C~~~~g~~v~~~~C~lRY~~~~F  106 (106)
T PF01657_consen   77 VANISSCCPGSRGGRVWYDSCFLRYENYPF  106 (106)
T ss_dssp             HCCHHHHTTSBSSEEEEESSEEEEEESS--
T ss_pred             HHHHHHhCCCCceEEEECCCEEEEEECCCC
Confidence            999999999999999999999999999998



The structure of this domain is known and it is thought to be involved in antifungal responses in plants []. Two copies of this domain are also found together in cysteine-rich protein kinases and cysteine-rich repeat secretory proteins. The domain contains four conserved cysteines.; PDB: 3A2E_D.


Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query159
2e79_A108 Ginkbilobin-2; DUF26 fold, C-X8-C-X2-C motif, lect 1e-28

Structure Templates Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query159
3a2e_A108 Ginkbilobin-2; domain 26 unknown function (DUF26), 99.97
2e79_A108 Ginkbilobin-2; DUF26 fold, C-X8-C-X2-C motif, lect 99.97
>3a2e_A Ginkbilobin-2; domain 26 unknown function (DUF26), C-X8-C-X2-C motif, antifungal protein, embryo-abundant protein (EAP), plant protein; 2.38A {Ginkgo biloba} Back     alignment and structure
Probab=99.97  E-value=7.3e-32  Score=191.91  Aligned_cols=106  Identities=19%  Similarity=0.485  Sum_probs=97.1

Q ss_pred             CCcccccCCCCCCcCCCcHHHHHHHHHHHHHHHHhccCCCCccccCeeeeecC-CCCCeeEEeccccCCCCccchHHHHH
Q 043520           23 KPTYIYHNCPSKNFTPNSAYQSNLNLLLSTLRSNATRGSSDKFSKGFYNTTTG-HEPNKVYGLFLCRGDFGAETCQNCVS  101 (159)
Q Consensus        23 ~p~~~~~~C~~~~~~~~s~f~~~l~~ll~~L~~~a~~~~~~~~~~~f~~~~~g-~~~~~vYglaqC~~Dls~~~C~~Cl~  101 (159)
                      ++.++++.|+.++++++++|++||+.||..|+.+++.++     .+|++...| .++++||||+||+||+++++|+.||+
T Consensus         2 ~t~~v~~~Cn~~~~t~~s~f~~nl~~ll~~L~~~a~~s~-----~~~~t~~~~~~~~~~vygl~qC~~Dls~~~C~~Cl~   76 (108)
T 3a2e_A            2 NTAFVSSACNTQKIPSGSPFNRNLRAMLADLRQNTAFSG-----YDYKTSRAGSGGAPTAYGRATCKQSISQSDCTACLS   76 (108)
T ss_dssp             CCCEEEEEECSSBCCTTCTHHHHHHHHHHHHHHHGGGTT-----SEEEEEECCSTTCCCEEEEEEECTTSCHHHHHHHHH
T ss_pred             CcceeeeecCCCccCCCChHHHHHHHHHHHHHhhCcccc-----CCceEeeccCCCCceEEEEEEEcCCCCHHHHHHHHH
Confidence            567899999889999999999999999999999987654     567777665 45689999999999999999999999


Q ss_pred             HHHHHhhhhCCCCceEEEEcCceEEEEcCccc
Q 043520          102 VATSDTAQLCPFGKENTIGYEECLLRYSNISF  133 (159)
Q Consensus       102 ~a~~~~~~~C~~~~ga~i~~~~C~lRYs~~~F  133 (159)
                      .|+.+++++||+++||+||+++|+||||+++|
T Consensus        77 ~a~~~~~~~C~~~~g~~i~~~~C~lRY~~~~F  108 (108)
T 3a2e_A           77 NLVNRIFSICNNAIGARVQLVDCFIQYEQRSF  108 (108)
T ss_dssp             HHHTTHHHHTTSBSSEEEEETTEEEEEESSCC
T ss_pred             HHHHHHHHHCCCCceEEEECCCEEEEEeCCcC
Confidence            99999999999999999999999999999998




Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

No hit with probability above 80.00