Citrus Sinensis ID: 043547


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320------
MAAGAGCAVDTRRALECRNGEAAAHLKFVSIFIIFFTSVIGVSLPVVLARYLQGKPSYDKATLIIKCFAAGVILSTSLVHVLPDAFDALSDCQVASKHPWRDFPFAGLVTLIGALLALLVDITASAHVEHGHGHGHNNNDNKESKNYVLVGTQEEIEGIKKGNYELGKLETGHGERTNRETDQEELIKLKQKLVSQVLEIGIIFHSVIIGVTMGMSQNQCTIRPLVAALAFHQIFEGMGLGGCIAQAGFNFGTVAYMCFMFSVTTPMGIVLGMIVFSVTGYDDSNPNALIMEGLLGGLSSGILIYMGLVDLIAVDFFHNKLMSSRS
ccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHcHHHHHHHccccccccccccccccHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHcHHHHccccccEEcccccHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccc
cccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccHEHHHHHHHHHHHHHHHHHHHcHHHHHHHcccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHcEEEEEEEEEEEcccccccccHHHHHHHHHHHHHHHcccccHHHHHcccccccHEEEEEEEHcccHHHHHEEEEEEcccccccccccEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHccccc
maagagcavdTRRALECRNGEAAAHLKFVSIFIIFFTSVIGVSLPVVLARylqgkpsydkATLIIKCFAAGVILSTSLVHVLPDAfdalsdcqvaskhpwrdfpfAGLVTLIGALLALLVDITASahvehghghghnnndnkesknyVLVGTQEEIEGIKkgnyelgkletghgertnreTDQEELIKLKQKLVSQVLEIGIIFHSVIIGVTmgmsqnqctIRPLVAALAFHQIFEGMGLGGCIAQAGFNFGTVAYMCFMFSVTTPMGIVLGMIVFSVtgyddsnpnaLIMEGLLGGLSSGILIYMGLVDLIAVDFFHNKLMSSRS
maagagcavdtrrALECRNGEAAAHLKFVSIFIIFFTSVIGVSLPVVLARYLQGKPSYDKATLIIKCFAAGVILSTSLVHVLPDAFDALSDCQVASKHPWRDFPFAGLVTLIGALLALLVDITASAHVEHGhghghnnndnkesKNYVLVGTQEEiegikkgnyelgkletghgertnretDQEELIKLKQKLVSQVLEIGIIFHSVIIGVTMGMSQNQCTIRPLVAALAFHQIFEGMGLGGCIAQAGFNFGTVAYMCFMFSVTTPMGIVLGMIVFSVTGYDDSNPNALIMEGLLGGLSSGILIYMGLVDLIAVDFFHNKLMSSRS
MAAGAGCAVDTRRALECRNGEAAAHLKfvsifiifftsvigvsLPVVLARYLQGKPSYDKATLIIKCFAAGVILSTSLVHVLPDAFDALSDCQVASKHPWRDFPFaglvtligallallvDITASAHVEhghghghnnnDNKESKNYVLVGTQEEIEGIKKGNYELGKLETGHGERTNRETDQEELIKLKQKLVSQVLEIGIIFHSVIIGVTMGMSQNQCTIRPLVAALAFHQIFEGMGLGGCIAQAGFNFGTVAYMCFMFSVTTPMGIVLGMIVFSVTGYDDSNPNAlimegllgglssgiliymglVDLIAVDFFHNKLMSSRS
******CAVDTRRALECRNGEAAAHLKFVSIFIIFFTSVIGVSLPVVLARYLQGKPSYDKATLIIKCFAAGVILSTSLVHVLPDAFDALSDCQVASKHPWRDFPFAGLVTLIGALLALLVDITASAHVE*****************YVLVGTQEEIEGI**************************LIKLKQKLVSQVLEIGIIFHSVIIGVTMGMSQNQCTIRPLVAALAFHQIFEGMGLGGCIAQAGFNFGTVAYMCFMFSVTTPMGIVLGMIVFSVTGYDDSNPNALIMEGLLGGLSSGILIYMGLVDLIAVDFFHNK******
**********************AAHLKFVSIFIIFFTSVIGVSLPVVLARYLQGKPSYDKATLIIKCFAAGVILSTSLVHVLPDAFDALSDCQVASKHPWRDFPFAGLVTLIGALLALLVDITASAHVEH**************************************************************LVSQVLEIGIIFHSVIIGVTMGMSQNQCTIRPLVAALAFHQIFEGMGLGGCIAQAGFNFGTVAYMCFMFSVTTPMGIVLGMIVFSVTGYDDSNPNALIMEGLLGGLSSGILIYMGLVDLIAVDFF*********
*********DTRRALECRNGEAAAHLKFVSIFIIFFTSVIGVSLPVVLARYLQGKPSYDKATLIIKCFAAGVILSTSLVHVLPDAFDALSDCQVASKHPWRDFPFAGLVTLIGALLALLVDITASAHVEHGHGHGHNNNDNKESKNYVLVGTQEEIEGIKKGNYELGKLETG***********EELIKLKQKLVSQVLEIGIIFHSVIIGVTMGMSQNQCTIRPLVAALAFHQIFEGMGLGGCIAQAGFNFGTVAYMCFMFSVTTPMGIVLGMIVFSVTGYDDSNPNALIMEGLLGGLSSGILIYMGLVDLIAVDFFHNKLMSSRS
***************ECRNGEAAAHLKFVSIFIIFFTSVIGVSLPVVLARYLQGKPSYDKATLIIKCFAAGVILSTSLVHVLPDAFDALSDCQVASKHPWRDFPFAGLVTLIGALLALLVDITASAHVEHGH****************************************************ELIKLKQKLVSQVLEIGIIFHSVIIGVTMGMSQNQCTIRPLVAALAFHQIFEGMGLGGCIAQAGFNFGTVAYMCFMFSVTTPMGIVLGMIVFSVTGYDDSNPNALIMEGLLGGLSSGILIYMGLVDLIAVDFFHNK******
ooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiii
ooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiii
ooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiii
oooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiii
oooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiii
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MAAGAGCAVDTRRALECRNGEAAAHLKFVSIFIIFFTSVIGVSLPVVLARYLQGKPSYDKATLIIKCFAAGVILSTSLVHVLPDAFDALSDCQVASKHPWRDFPFAGLVTLIGALLALLVDITASAHVEHGHGHGHNNNDNKESKNYVLVGTQEEIEGIKKGNYELGKLETGHGERTNRETDQEELIKLKQKLVSQVLEIGIIFHSVIIGVTMGMSQNQCTIRPLVAALAFHQIFEGMGLGGCIAQAGFNFGTVAYMCFMFSVTTPMGIVLGMIVFSVTGYDDSNPNALIMEGLLGGLSSGILIYMGLVDLIAVDFFHNKLMSSRS
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query326 2.2.26 [Sep-21-2011]
O64738341 Zinc transporter 6, chlor yes no 0.941 0.900 0.643 1e-116
Q6L8F9395 Zinc transporter 6 OS=Ory yes no 0.938 0.774 0.541 2e-94
Q8W246365 Zinc transporter 7 OS=Ara no no 0.883 0.789 0.418 3e-59
Q6L8G0353 Zinc transporter 5 OS=Ory no no 0.914 0.844 0.398 1e-56
Q6L8G1370 Fe(2+) transport protein no no 0.880 0.775 0.415 2e-56
Q8W245364 Probable zinc transporter no no 0.901 0.807 0.392 9e-55
Q8S3W4347 Probable zinc transporter no no 0.889 0.835 0.389 3e-53
Q75HB1374 Fe(2+) transport protein no no 0.895 0.780 0.412 3e-52
Q38856347 Fe(2+) transport protein no no 0.880 0.827 0.394 8e-52
O81850350 Fe(2+) transport protein no no 0.883 0.822 0.401 2e-51
>sp|O64738|ZIP6_ARATH Zinc transporter 6, chloroplastic OS=Arabidopsis thaliana GN=ZIP6 PE=3 SV=1 Back     alignment and function desciption
 Score =  419 bits (1077), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 208/323 (64%), Positives = 251/323 (77%), Gaps = 16/323 (4%)

Query: 5   AGCAVDTR---RALECRNGEAAAHLKFVSIFIIFFTSVIGVSLPVVLARYLQGKPSYDKA 61
           A C   T    RA  CR+GE A+HLK V++F IF TSV GV  PV+LA+Y  GKP YDKA
Sbjct: 2   ASCVTGTEAAIRAAACRDGEEASHLKIVAVFAIFLTSVFGVWGPVLLAKYFHGKPLYDKA 61

Query: 62  TLIIKCFAAGVILSTSLVHVLPDAFDALSDCQVASKHPWRDFPFAGLVTLIGALLALLVD 121
            L+IKCFAAGVILSTSLVHVLP+AF++L+DCQV+S+HPW+DFPFAGLVT+IGA+ ALLVD
Sbjct: 62  ILVIKCFAAGVILSTSLVHVLPEAFESLADCQVSSRHPWKDFPFAGLVTMIGAITALLVD 121

Query: 122 ITASAHVEHGHGHGHNNNDNKESKNYVLVGTQEEIEGIKKGNYELGKLETGHGERTNRET 181
           +TAS H+ H                Y+ VG          G  E+ + + G  +   +E 
Sbjct: 122 LTASEHMGH-----GGGGGGDGGMEYMPVGK-------AVGGLEMKEGKCG-ADLEIQEN 168

Query: 182 DQEELIKLKQKLVSQVLEIGIIFHSVIIGVTMGMSQNQCTIRPLVAALAFHQIFEGMGLG 241
            +EE++K+KQ+LVSQVLEIGIIFHSVIIGVTMGMSQN+CTIRPL+AAL+FHQIFEG+GLG
Sbjct: 169 SEEEIVKMKQRLVSQVLEIGIIFHSVIIGVTMGMSQNKCTIRPLIAALSFHQIFEGLGLG 228

Query: 242 GCIAQAGFNFGTVAYMCFMFSVTTPMGIVLGMIVFSVTGYDDSNPNALIMEGLLGGLSSG 301
           GCIAQAGF  GTV YMC MF+VTTP+GIVLGM++F+ TGYDD NPNALIMEGLLG  SSG
Sbjct: 229 GCIAQAGFKAGTVVYMCLMFAVTTPLGIVLGMVIFAATGYDDQNPNALIMEGLLGSFSSG 288

Query: 302 ILIYMGLVDLIAVDFFHNKLMSS 324
           ILIYM LVDLIA+DFFHNK++++
Sbjct: 289 ILIYMALVDLIALDFFHNKMLTT 311




May play a role in the transport of zinc in the plastids.
Arabidopsis thaliana (taxid: 3702)
>sp|Q6L8F9|ZIP6_ORYSJ Zinc transporter 6 OS=Oryza sativa subsp. japonica GN=ZIP6 PE=2 SV=1 Back     alignment and function description
>sp|Q8W246|ZIP7_ARATH Zinc transporter 7 OS=Arabidopsis thaliana GN=ZIP7 PE=2 SV=1 Back     alignment and function description
>sp|Q6L8G0|ZIP5_ORYSJ Zinc transporter 5 OS=Oryza sativa subsp. japonica GN=ZIP5 PE=2 SV=1 Back     alignment and function description
>sp|Q6L8G1|IRT2_ORYSJ Fe(2+) transport protein 2 OS=Oryza sativa subsp. japonica GN=IRT2 PE=2 SV=1 Back     alignment and function description
>sp|Q8W245|ZIP10_ARATH Probable zinc transporter 10 OS=Arabidopsis thaliana GN=ZIP10 PE=3 SV=2 Back     alignment and function description
>sp|Q8S3W4|ZIP8_ARATH Probable zinc transporter 8 OS=Arabidopsis thaliana GN=ZIP8 PE=2 SV=1 Back     alignment and function description
>sp|Q75HB1|IRT1_ORYSJ Fe(2+) transport protein 1 OS=Oryza sativa subsp. japonica GN=IRT1 PE=2 SV=1 Back     alignment and function description
>sp|Q38856|IRT1_ARATH Fe(2+) transport protein 1 OS=Arabidopsis thaliana GN=IRT1 PE=1 SV=2 Back     alignment and function description
>sp|O81850|IRT2_ARATH Fe(2+) transport protein 2 OS=Arabidopsis thaliana GN=IRT2 PE=1 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query326
255546892330 zinc/iron transporter, putative [Ricinus 0.926 0.915 0.764 1e-135
224103919335 ZIP transporter [Populus trichocarpa] gi 0.944 0.919 0.738 1e-133
225434524335 PREDICTED: zinc transporter 6, chloropla 0.944 0.919 0.740 1e-132
353731076328 ZIP5 [Solanum lycopersicum] gi|311088597 0.923 0.917 0.720 1e-126
357490947318 Zinc transporter [Medicago truncatula] g 0.880 0.902 0.695 1e-122
356566040328 PREDICTED: zinc transporter 6, chloropla 0.920 0.914 0.705 1e-121
224059803337 ZIP transporter [Populus trichocarpa] gi 0.950 0.919 0.713 1e-121
449518603334 PREDICTED: zinc transporter 6, chloropla 0.944 0.922 0.677 1e-118
449450830334 PREDICTED: zinc transporter 6, chloropla 0.944 0.922 0.670 1e-117
356541778394 PREDICTED: zinc transporter 6, chloropla 0.920 0.761 0.700 1e-117
>gi|255546892|ref|XP_002514504.1| zinc/iron transporter, putative [Ricinus communis] gi|223546403|gb|EEF47904.1| zinc/iron transporter, putative [Ricinus communis] Back     alignment and taxonomy information
 Score =  487 bits (1253), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 247/323 (76%), Positives = 269/323 (83%), Gaps = 21/323 (6%)

Query: 3   AGAGCAVDTRRALECRNGEAAAHLKFVSIFIIFFTSVIGVSLPVVLARYLQGKPSYDKAT 62
           A A C +DT RA  CR+ EAA HL            VIG+S PV+LARY QGKP YDKA 
Sbjct: 2   AAAACVIDTARAASCRDTEAATHLX---------XXVIGISFPVLLARYFQGKPLYDKAV 52

Query: 63  LIIKCFAAGVILSTSLVHVLPDAFDALSDCQVASKHPWRDFPFAGLVTLIGALLALLVDI 122
           L+IKCFAAGVILSTSLVHVLPDA++ALSDCQVASKHPW+DFPFAGLVTL+GALLAL VDI
Sbjct: 53  LLIKCFAAGVILSTSLVHVLPDAYEALSDCQVASKHPWKDFPFAGLVTLVGALLALFVDI 112

Query: 123 TASAHVEHGHGHGHNNNDNKES-KNYVLVGTQEEIEGIKKGNYELGKLETGHGERTNRET 181
           TASAHVEHGHG      ++KE+   Y  VGTQEEI G  K + EL K+E G  +   RE 
Sbjct: 113 TASAHVEHGHG------ESKEAILEYTPVGTQEEIVG--KKSVELSKIELGDHKGRERE- 163

Query: 182 DQEELIKLKQKLVSQVLEIGIIFHSVIIGVTMGMSQNQCTIRPLVAALAFHQIFEGMGLG 241
             E L+KLKQKL+SQVLEIGIIFHSVIIGVTMGMSQNQCTIRPLVAALAFHQIFEGMGLG
Sbjct: 164 --EYLVKLKQKLISQVLEIGIIFHSVIIGVTMGMSQNQCTIRPLVAALAFHQIFEGMGLG 221

Query: 242 GCIAQAGFNFGTVAYMCFMFSVTTPMGIVLGMIVFSVTGYDDSNPNALIMEGLLGGLSSG 301
           GCIAQAGF+ GTVAYMCFMFSVTTPMGI+LGMI+FS+TGYDDSNPNALIMEGLLG LSSG
Sbjct: 222 GCIAQAGFSMGTVAYMCFMFSVTTPMGILLGMIIFSLTGYDDSNPNALIMEGLLGSLSSG 281

Query: 302 ILIYMGLVDLIAVDFFHNKLMSS 324
           ILIYMGLVDLIAVDFFHNKLM+S
Sbjct: 282 ILIYMGLVDLIAVDFFHNKLMTS 304




Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224103919|ref|XP_002313244.1| ZIP transporter [Populus trichocarpa] gi|222849652|gb|EEE87199.1| ZIP transporter [Populus trichocarpa] Back     alignment and taxonomy information
>gi|225434524|ref|XP_002276231.1| PREDICTED: zinc transporter 6, chloroplastic [Vitis vinifera] gi|297745865|emb|CBI15921.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|353731076|ref|NP_001238802.1| ZIP5 [Solanum lycopersicum] gi|311088597|gb|ADP68586.1| ZIP5 [Solanum lycopersicum] Back     alignment and taxonomy information
>gi|357490947|ref|XP_003615761.1| Zinc transporter [Medicago truncatula] gi|355517096|gb|AES98719.1| Zinc transporter [Medicago truncatula] Back     alignment and taxonomy information
>gi|356566040|ref|XP_003551243.1| PREDICTED: zinc transporter 6, chloroplastic-like [Glycine max] Back     alignment and taxonomy information
>gi|224059803|ref|XP_002299993.1| ZIP transporter [Populus trichocarpa] gi|222847251|gb|EEE84798.1| ZIP transporter [Populus trichocarpa] Back     alignment and taxonomy information
>gi|449518603|ref|XP_004166326.1| PREDICTED: zinc transporter 6, chloroplastic-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|449450830|ref|XP_004143165.1| PREDICTED: zinc transporter 6, chloroplastic-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|356541778|ref|XP_003539350.1| PREDICTED: zinc transporter 6, chloroplastic-like [Glycine max] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query326
TAIR|locus:2045634341 ZIP6 [Arabidopsis thaliana (ta 0.941 0.900 0.523 1.3e-82
UNIPROTKB|A3BI11390 ZIP8 "Zinc transporter 8" [Ory 0.429 0.358 0.451 6.6e-41
TAIR|locus:2827434365 ZIP7 "zinc transporter 7 precu 0.907 0.810 0.337 6.8e-40
UNIPROTKB|Q6L8G1370 IRT2 "Fe(2+) transport protein 0.920 0.810 0.340 9.9e-39
TAIR|locus:2133965347 IRT1 "iron-regulated transport 0.463 0.435 0.405 4.5e-38
UNIPROTKB|Q75HB1374 IRT1 "Fe(2+) transport protein 0.763 0.665 0.375 3.9e-37
TAIR|locus:2207140360 ZIP5 "zinc transporter 5 precu 0.794 0.719 0.365 1e-36
UNIPROTKB|Q6L8G0353 ZIP5 "Zinc transporter 5" [Ory 0.877 0.810 0.337 1.3e-36
UNIPROTKB|Q7XLD4364 ZIP3 "Zinc transporter 3" [Ory 0.957 0.857 0.328 7.2e-36
TAIR|locus:2062576339 ZIP3 "zinc transporter 3 precu 0.457 0.439 0.417 9.2e-36
TAIR|locus:2045634 ZIP6 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 828 (296.5 bits), Expect = 1.3e-82, P = 1.3e-82
 Identities = 169/323 (52%), Positives = 210/323 (65%)

Query:     5 AGCAVDTR---RALECRNGEAAAHLKXXXXXXXXXXXXXXXXLPVVLARYLQGKPSYDKA 61
             A C   T    RA  CR+GE A+HLK                 PV+LA+Y  GKP YDKA
Sbjct:     2 ASCVTGTEAAIRAAACRDGEEASHLKIVAVFAIFLTSVFGVWGPVLLAKYFHGKPLYDKA 61

Query:    62 TLIIKCFAAGVILSTSLVHVLPDAFDALSDCQVASKHPWRDFPFXXXXXXXXXXXXXXXD 121
              L+IKCFAAGVILSTSLVHVLP+AF++L+DCQV+S+HPW+DFPF               D
Sbjct:    62 ILVIKCFAAGVILSTSLVHVLPEAFESLADCQVSSRHPWKDFPFAGLVTMIGAITALLVD 121

Query:   122 ITASAHVEXXXXXXXXXXDNKESKNYVLVGTQEEIEGIKKGNYELGKLETGHGERTNRET 181
             +TAS H+           D      Y+ VG  + + G++    + G       +   +E 
Sbjct:   122 LTASEHM---GHGGGGGGDG--GMEYMPVG--KAVGGLEMKEGKCG------ADLEIQEN 168

Query:   182 DQEELIKLKQKLVSQVLEIGIIFHSVIIGVTMGMSQNQCTIRPLVAALAFHQIFEGMGLG 241
              +EE++K+KQ+LVSQVLEIGIIFHSVIIGVTMGMSQN+CTIRPL+AAL+FHQIFEG+GLG
Sbjct:   169 SEEEIVKMKQRLVSQVLEIGIIFHSVIIGVTMGMSQNKCTIRPLIAALSFHQIFEGLGLG 228

Query:   242 GCIAQAGFNFGTVAYMCFMFSVTTPMGIVLGMIVFSVTGYDDSNPNAXXXXXXXXXXXXX 301
             GCIAQAGF  GTV YMC MF+VTTP+GIVLGM++F+ TGYDD NPNA             
Sbjct:   229 GCIAQAGFKAGTVVYMCLMFAVTTPLGIVLGMVIFAATGYDDQNPNALIMEGLLGSFSSG 288

Query:   302 XXXXXXXVDLIAVDFFHNKLMSS 324
                    VDLIA+DFFHNK++++
Sbjct:   289 ILIYMALVDLIALDFFHNKMLTT 311




GO:0005385 "zinc ion transmembrane transporter activity" evidence=IEA
GO:0005886 "plasma membrane" evidence=ISM
GO:0006812 "cation transport" evidence=ISS
GO:0008324 "cation transmembrane transporter activity" evidence=ISS
GO:0016020 "membrane" evidence=IEA
GO:0016021 "integral to membrane" evidence=IEA
GO:0030001 "metal ion transport" evidence=IEA
GO:0046873 "metal ion transmembrane transporter activity" evidence=IEA;ISS
GO:0055085 "transmembrane transport" evidence=IEA
GO:0071577 "zinc ion transmembrane transport" evidence=IEA
GO:0009624 "response to nematode" evidence=IEP
UNIPROTKB|A3BI11 ZIP8 "Zinc transporter 8" [Oryza sativa Japonica Group (taxid:39947)] Back     alignment and assigned GO terms
TAIR|locus:2827434 ZIP7 "zinc transporter 7 precursor" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|Q6L8G1 IRT2 "Fe(2+) transport protein 2" [Oryza sativa Japonica Group (taxid:39947)] Back     alignment and assigned GO terms
TAIR|locus:2133965 IRT1 "iron-regulated transporter 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|Q75HB1 IRT1 "Fe(2+) transport protein 1" [Oryza sativa Japonica Group (taxid:39947)] Back     alignment and assigned GO terms
TAIR|locus:2207140 ZIP5 "zinc transporter 5 precursor" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|Q6L8G0 ZIP5 "Zinc transporter 5" [Oryza sativa Japonica Group (taxid:39947)] Back     alignment and assigned GO terms
UNIPROTKB|Q7XLD4 ZIP3 "Zinc transporter 3" [Oryza sativa Japonica Group (taxid:39947)] Back     alignment and assigned GO terms
TAIR|locus:2062576 ZIP3 "zinc transporter 3 precursor" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q6L8F9ZIP6_ORYSJNo assigned EC number0.54100.93860.7746yesno
O64738ZIP6_ARATHNo assigned EC number0.64390.94170.9002yesno

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Your Input:
fgenesh4_pg.C_LG_IX000872
ZIP transporter (335 aa)
(Populus trichocarpa)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query326
TIGR00820324 TIGR00820, zip, ZIP zinc/iron transport family 1e-124
PLN02159337 PLN02159, PLN02159, Fe(2+) transport protein 2e-69
pfam02535314 pfam02535, Zip, ZIP Zinc transporter 3e-67
>gnl|CDD|233141 TIGR00820, zip, ZIP zinc/iron transport family Back     alignment and domain information
 Score =  359 bits (922), Expect = e-124
 Identities = 141/315 (44%), Positives = 191/315 (60%), Gaps = 17/315 (5%)

Query: 10  DTRRALECRNGEAAAHLKFVSIFIIFFTSVIGVSLPVVLARYLQGKPSYDKATLIIKCFA 69
                  C N E A  LK V+IF I   SVIGV  P+ + + +           + K FA
Sbjct: 2   SHEDDNSCNNKEGALKLKIVAIFSILLASVIGVMFPL-IGKNVPSLRPEGNFFFVAKAFA 60

Query: 70  AGVILSTSLVHVLPDAFDALSDCQVASKHPWRDFPFAGLVTLIGALLALLVDITASAHVE 129
           AGVIL+T  +HVLP+AF+ LS   + S  PW  FPFAG + +I A+L LLVD+ A+++ E
Sbjct: 61  AGVILATGFMHVLPEAFEMLSSPCLEST-PWGKFPFAGFIAMISAILTLLVDLFATSYYE 119

Query: 130 HGHGHGHNNNDNKESKNYVLVGTQEEIEGIKKGNYELGKLETGHGERTNRETDQEELIKL 189
             HG G + +        + VG  EE              E          T+ E +  L
Sbjct: 120 RKHGKGDHGSK------EIKVGDGEE----GTAGGTKHGHEYYEDHV---HTNSEVVQLL 166

Query: 190 KQKLVSQVLEIGIIFHSVIIGVTMGMSQNQCTIRPLVAALAFHQIFEGMGLGGCIAQAGF 249
           +Q++V+QVLE+GII HSV+IG+++G SQ+  TI+PL+AAL+FHQ FEG+GLGGCI+QA F
Sbjct: 167 RQRVVAQVLELGIIVHSVVIGLSLGASQSPDTIKPLIAALSFHQFFEGLGLGGCISQAEF 226

Query: 250 NFGTVAYMCFMFSVTTPMGIVLGMIVFSVTGYDDSNPNALIMEGLLGGLSSGILIYMGLV 309
              +V  MC  F+VTTP+GI +GM + S   YDDS+P ALI+EG+L   S+GILIYM LV
Sbjct: 227 KCKSVTIMCTFFAVTTPLGIAIGMGISS--SYDDSSPTALIVEGVLNAASAGILIYMALV 284

Query: 310 DLIAVDFFHNKLMSS 324
           DL+A DF H K+ S+
Sbjct: 285 DLLAADFMHPKMQSN 299


The Zinc (Zn2+)-Iron (Fe2+) Permease (ZIP) Family (TC 2.A.5)Members of the ZIP family consist of proteins with eight putative transmembrane spanners. They are derived from animals, plants and yeast. Theycomprise a diverse family, with several paralogues in any one organism (e.g., at least five in Caenorabditis elegans, at least five in Arabidopsis thaliana and two inSaccharomyces cervisiae. The two S. cerevisiae proteins, Zrt1 and Zrt2, both probably transport Zn2+ with high specificity, but Zrt1 transports Zn2+ with ten-fold higher affinitythan Zrt2. Some members of the ZIP family have been shown to transport Zn2+ while others transport Fe2+, and at least one transports a range of metal ions. The energy source fortransport has not been characterized, but these systems probably function as secondary carriers [Transport and binding proteins, Cations and iron carrying compounds]. Length = 324

>gnl|CDD|177818 PLN02159, PLN02159, Fe(2+) transport protein Back     alignment and domain information
>gnl|CDD|217089 pfam02535, Zip, ZIP Zinc transporter Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 326
KOG1558327 consensus Fe2+/Zn2+ regulated transporter [Inorgan 100.0
TIGR00820324 zip ZIP zinc/iron transport family. transport has 100.0
PLN02159337 Fe(2+) transport protein 100.0
PF02535317 Zip: ZIP Zinc transporter; InterPro: IPR003689 The 100.0
PRK04201265 zinc transporter ZupT; Provisional 100.0
COG0428266 Predicted divalent heavy-metal cations transporter 99.93
KOG2694361 consensus Putative zinc transporter [Inorganic ion 99.88
KOG2693453 consensus Putative zinc transporter [Inorganic ion 99.86
KOG3907303 consensus ZIP-like zinc transporter proteins [Intr 99.75
KOG2474406 consensus Zinc transporter and related ZIP domain- 98.79
PRK04201 265 zinc transporter ZupT; Provisional 97.56
PF02535317 Zip: ZIP Zinc transporter; InterPro: IPR003689 The 95.84
COG0428266 Predicted divalent heavy-metal cations transporter 93.94
PRK11469188 hypothetical protein; Provisional 91.43
TIGR00820324 zip ZIP zinc/iron transport family. transport has 90.74
KOG1558327 consensus Fe2+/Zn2+ regulated transporter [Inorgan 89.5
PLN02159337 Fe(2+) transport protein 88.32
TIGR02840 206 spore_YtaF putative sporulation protein YtaF. This 86.62
COG5336116 Uncharacterized protein conserved in bacteria [Fun 85.4
PF0265967 DUF204: Domain of unknown function DUF; InterPro: 84.55
>KOG1558 consensus Fe2+/Zn2+ regulated transporter [Inorganic ion transport and metabolism] Back     alignment and domain information
Probab=100.00  E-value=1.2e-56  Score=416.81  Aligned_cols=289  Identities=40%  Similarity=0.738  Sum_probs=235.8

Q ss_pred             cccccccccchhHHHHHHHHHHHHHHHhHhhHHHHhhhcCCCCcchhHHHHhhhhchhhhhhhcccccHhhHhhhhh-hh
Q 043547           15 LECRNGEAAAHLKFVSIFIIFFTSVIGVSLPVVLARYLQGKPSYDKATLIIKCFAAGVILSTSLVHVLPDAFDALSD-CQ   93 (326)
Q Consensus        15 ~~c~~~~~~~~~ki~~~~~i~~~sl~g~~lP~~~~~~~~~~~~~~~~l~~~~~fa~GvlL~~aflhLLPea~e~~~~-~~   93 (326)
                      .+|.|++....+|+++++++|++|++|+++| ++.+|.+..+..++.+.+..||++||+|+|+|+|||||++|.+++ |+
T Consensus         7 ~~~~~~~~~~~lKi~ai~vil~~s~i~~~~P-l~~~~~~~~~~~~~~~~~~kcFa~GViLaT~FlH~Lpd~~E~l~~~~~   85 (327)
T KOG1558|consen    7 ASCADKMGALLLKIVAIFVILLLSLIGGLLP-LFVRRTSALQPESRFLSLVKCFAGGVILATGFLHLLPDAFEALESLCL   85 (327)
T ss_pred             ccccchhhhhhHHHHHHHHHHHHHHHHhcch-HhhccccccCCccchHHHHHHHhccHHHHHHHHHhChhHHHHhhcccc
Confidence            7899999999999999999999999999999 566666555677889999999999999999999999999999988 65


Q ss_pred             hcCCCCCCCChhHHHHHHHHHHHHHHHHHHHhhhhccCCCCCCCCCCCCccccccccCCcccccccccCcccc--CCCc-
Q 043547           94 VASKHPWRDFPFAGLVTLIGALLALLVDITASAHVEHGHGHGHNNNDNKESKNYVLVGTQEEIEGIKKGNYEL--GKLE-  170 (326)
Q Consensus        94 ~~~~~~~~~~p~~~~~~~~Gf~l~~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~-  170 (326)
                        ..+.|.+|||+++++++||++++++|.+.+.+.+++|.+..+. +         +...++  ++.......  ++.. 
T Consensus        86 --~~~~~~~fp~~~~i~~~gf~l~l~id~~~~~~~~h~~~~~~~~-~---------~~~~~~--~~~~~~~~~~~~~~~~  151 (327)
T KOG1558|consen   86 --ADNPWGKFPFAEFIAMLGFFLTLLIDEITTSYVGHGHSHKKRN-E---------VAVSEE--GEDLRAVGNGEHGAIH  151 (327)
T ss_pred             --cCCCCcCCChHHHHHHHHHHHHHHHHHHHHHHhcCCCcccccc-c---------cCCcCc--CcccccccccCCcccc
Confidence              2578899999999999999999999999999886554431110 0         000000  000000000  0000 


Q ss_pred             CCCCCCCCCCC---chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCccchhHHHHHHHHHHHHHHHHHHHHHhhc
Q 043547          171 TGHGERTNRET---DQEELIKLKQKLVSQVLEIGIIFHSVIIGVTMGMSQNQCTIRPLVAALAFHQIFEGMGLGGCIAQA  247 (326)
Q Consensus       171 ~~~~h~~~~~~---~~~~~~~~~~~~~~~~l~~al~iHS~~eGlalG~~~~~~~~~~l~iAI~~Hk~~e~~alg~~l~~~  247 (326)
                      +++.|.|.++.   ..++.+  .++++++++++|+++||++||+++|++.+.+.++.++.|+.+||.+|+|++|.++.++
T Consensus       152 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~iL~lgi~~HSvfeGlalGv~~~~~ti~~L~~al~fHk~fegf~lG~~l~~a  229 (327)
T KOG1558|consen  152 VGHSHGHSEPSTPGVVDDGQ--ASRLRSLILELGLSFHSVFEGLALGVQDSVSTIWTLFLALSFHKLFEGFGLGGCLLQA  229 (327)
T ss_pred             CCCCCCCCCCCCccccchhh--hhhHHHHHHHHHHHHHHHHHhhhccccCCHHHHHHHHHHHHHHHHHHHhcccHHHhhc
Confidence            12222222211   111111  2567899999999999999999999999999999999999999999999999999999


Q ss_pred             CCchhHHHHHHHHHHhHHHHHHHHHHHHHhcccCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCcccc
Q 043547          248 GFNFGTVAYMCFMFSVTTPMGIVLGMIVFSVTGYDDSNPNALIMEGLLGGLSSGILIYMGLVDLIAVDFFHNKLMS  323 (326)
Q Consensus       248 ~~s~~~~~~~~~~fsl~tPlG~~iG~~i~~~~~~~~~s~~~~~~~~il~alaaGtflYV~~~ElLp~e~~~~~~~~  323 (326)
                      +++++.++.++++||++||+|+++|+++.+.  | ++++++++++++++|+|+|||+||+++|+||+|+.++|+|+
T Consensus       230 ~~~~~~~~~~~~~fslttPiGi~iG~~i~~~--~-~~s~~~~i~~gvL~alAaGtliY~~lvElla~ef~~~~~~~  302 (327)
T KOG1558|consen  230 GFTFKSAVLMALFFSLTTPIGIALGIGISSS--Y-ENSPGALITSGVLEALAAGTLIYVALVELLAAEFANPKMQS  302 (327)
T ss_pred             ccchHHHHHHHHHHHHHhHHHHHHHHHhccc--c-cCCchhHHHHHHHHHHhhhHhHHHHHHHHhHHHhcCchhhh
Confidence            9999999999999999999999999999987  7 78999999999999999999999999999999999999876



>TIGR00820 zip ZIP zinc/iron transport family Back     alignment and domain information
>PLN02159 Fe(2+) transport protein Back     alignment and domain information
>PF02535 Zip: ZIP Zinc transporter; InterPro: IPR003689 These ZIP zinc transporter proteins define a family of metal ion transporters that are found in plants, protozoa, fungi, invertebrates, and vertebrates, making it now possible to address questions of metal ion accumulation and homeostasis in diverse organisms [] Back     alignment and domain information
>PRK04201 zinc transporter ZupT; Provisional Back     alignment and domain information
>COG0428 Predicted divalent heavy-metal cations transporter [Inorganic ion transport and metabolism] Back     alignment and domain information
>KOG2694 consensus Putative zinc transporter [Inorganic ion transport and metabolism] Back     alignment and domain information
>KOG2693 consensus Putative zinc transporter [Inorganic ion transport and metabolism] Back     alignment and domain information
>KOG3907 consensus ZIP-like zinc transporter proteins [Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information
>KOG2474 consensus Zinc transporter and related ZIP domain-containing proteins [Inorganic ion transport and metabolism] Back     alignment and domain information
>PRK04201 zinc transporter ZupT; Provisional Back     alignment and domain information
>PF02535 Zip: ZIP Zinc transporter; InterPro: IPR003689 These ZIP zinc transporter proteins define a family of metal ion transporters that are found in plants, protozoa, fungi, invertebrates, and vertebrates, making it now possible to address questions of metal ion accumulation and homeostasis in diverse organisms [] Back     alignment and domain information
>COG0428 Predicted divalent heavy-metal cations transporter [Inorganic ion transport and metabolism] Back     alignment and domain information
>PRK11469 hypothetical protein; Provisional Back     alignment and domain information
>TIGR00820 zip ZIP zinc/iron transport family Back     alignment and domain information
>KOG1558 consensus Fe2+/Zn2+ regulated transporter [Inorganic ion transport and metabolism] Back     alignment and domain information
>PLN02159 Fe(2+) transport protein Back     alignment and domain information
>TIGR02840 spore_YtaF putative sporulation protein YtaF Back     alignment and domain information
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown] Back     alignment and domain information
>PF02659 DUF204: Domain of unknown function DUF; InterPro: IPR003810 Uncharacterised domain in proteins of unknown function Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

No hit with e-value below 0.005

Structure Templates Detected by HHsearch ?

No hit with probability above 80.00


Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

No hit with probability above 80.00