Citrus Sinensis ID: 043555

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360---
Protein Sequence
MGRLCCSTDGNLNEEKFSEPASPCHRLVYAAAASLTCAVVMASLVPIKYFSLNATSPTIIAVAIKYSLDLNTVMPHKQDRLTKLSSAVFMCTVMGNTMPSLGAIETKELLMNIIALGILVSTMIVNICFQLGTGIIFVFWKEHAFIMLIMLVLLVIYFSALTVPINNQYLLLKHNKNLLKKFCSISDDSRSESQSSLKLDISRFVLHVEGENELVDIIMKSNQDATDKWMQMGQKKQPEHLLQLLKQSNSQGFKGVLASNSIYKVSQTILLIHQSRNNQTTERLFAVIAVMTSDIICACLTNLPHVMCLNCLSSTLDQREDCMRNTVYLFGKSETILKILDQRGIPKITQSKTLSKYDEDIQN
Secondary Structure (PSIPRED)
ccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHcccccEEEccccccEEEEEEEEcccccccccccHHHHHccccHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHHHHEEEccEEEEEEEHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHcHHHHHHHcccccccccccHHHHHHHHHHHHHHcccHHHHHHHHHHHcHHHHHHHHHHcccccHHHHHHHHHcccccccccHHcccccHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHccccccEEEcccccHHHHHHHHHHHHHHHHccHHHHHHHHHHccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cccEccccccccccHHccccccHHHHHHHHHHHHHHHHHHHHHHccccEEEEcccHHHHHHHHHEcccccccccccHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccEEEEEcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEHHHHHHHHHccccccccccccccccHHHHHHHHHHHcccHHHHHHHHHHcHHHHHHHHHHcccccHHHHHHHHHcccccccccccccccHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccEHHEHcHHHcc
Coil and Loop (DISEMBL)
mgrlccstdgnlneekfsepaspchRLVYAAAASLTCAVVMASLVPIkyfslnatsPTIIAVAIKYSLdlntvmphkqdRLTKLSSAVFMCTVmgntmpslgaIETKELLMNIIALGILVSTMIVNICFQLGTGIIFVFWKEHAFIMLIMLVLLVIYFSALTVPINNQYLLLKHNKNLLKKFcsisddsrsesqsslklDISRFVLHVEGENELVDIIMKSNQDATDKWMQMGQKKQPEHLLQLLKQSnsqgfkgvlasnsiyKVSQTILLIHQSRNNQTTERLFAVIAVMTSDIICAcltnlphvmclnCLSSTLDQREDCMRNTVYLFGKSETILKILDqrgipkitqsktlskydediqn
Flexible Loop (DISEMBL)
mgrlccstdgnlneekfsepasPCHRLVYAAAASLTCAVVMASLVPIKYFSLNATSPTIIAVAIKYSLDLNTVMPHKQDRLTKLSSAVFMCTVMGNTMPSLGAIETKELLMNIIALGILVSTMIVNICFQLGTGIIFVFWKEHAFIMLIMLVLLVIYFSALTVPINNQYLLLKHNKNLLKKFCSISDDsrsesqsslkldiSRFVLHVEGENELVDIIMKSNQDATDKWMQMGQKKQPEHLLQLLKQSNSQGFKGVLASNSIYKVSQTILLIHQSRNNQTTERLFAVIAVMTSDIICACLTNLPHVMCLNCLSSTLDQREDCMRNTVYLFGKSetilkildqrgipkitqsktlskydediqn
Low Complexity Region (SEG)
MGRLCCSTDGNLNEEKFSEPASPCHRLVYAAAASLTCAVVMASLVPIKYFSLNATSPTIIAVAIKYSLDLNTVMPHKQDRLTKLSSAVFMCTVMGNTMPSLGAIETKELLMNIIALGILVSTMIVNICFQLGTGIIFVFWKEHAFimlimlvllviYFSALTVPInnqylllkhnknllkkFCsisddsrsesqssLKLDISRFVLHVEGENELVDIIMKSNQDATDKWMQMGQKKQPEHLLQLLKQSNSQGFKGVLASNSIYKVSQTILLIHQSRNNQTTERLFAVIAVMTSDIICACLTNLPHVMCLNCLSSTLDQREDCMRNTVYLFGKSETILKILDQRGIPKITQSKTLSKYDEDIQN
Disordered region (IsUnstruct)
**********************PCHRLVYAAAASLTCAVVMASLVPIKYFSLNATSPTIIAVAIKYSLDLNTVMPHKQDRLTKLSSAVFMCTVMGNTMPSLGAIETKELLMNIIALGILVSTMIVNICFQLGTGIIFVFWKEHAFIMLIMLVLLVIYFSALTVPINNQYLLLKHNKNLLKKFCSI*************LDISRFVLHVEGENELVDIIMK*******************************GFKGVLASNSIYKVSQTILLIHQSRNNQTTERLFAVIAVMTSDIICACLTNLPHVMCLNCLSSTLDQREDCMRNTVYLFGKSETILKILDQRGIP*****************
Disordered Region (DISOPRED)
*********GNLNEEKFSEPASPCHRLVYAAAASLTCAVVMASLVPIKYFSLNATSPTIIAVAIKYSLDLNTVMPHKQDRLTKLSSAVFMCTVMGNTMPSLGAIETKELLMNIIALGILVSTMIVNICFQLGTGIIFVFWKEHAFIMLIMLVLLVIYFSALTVPINNQYLLLKHNKNL*************************FVL**********IIMKSNQDATDKWMQMGQKKQPEHLLQLLKQSNSQGFKGVLASNSIYKVSQTILLIHQSRNNQTTERLFAVIAVMTSDIICACLTNLPHVMCLNCLSSTLDQREDCMRNTVYLFGKSETILKILDQRGIPKITQSKTLSKY******
Disordered Region (DISEMBL)
MGRLCCSTDGNLNEEKFSEPASPCHRLVYAAAASLTCAVVMASLVPIKYFSLNATSPTIIAVAIKYSLDLNTVMPHKQDRLTKLSSAVFMCTVMGNTMPSLGAIETKELLMNIIALGILVSTMIVNICFQLGTGIIFVFWKEHAFIMLIMLVLLVIYFSALTVPINNQYLLLKHNKNLLKKFCSI***********LKLDISRFVLHVEGENELVDIIMKSNQDATDKWMQMGQKKQPEHLLQLLKQSNSQGFKGVLASNSIYKVSQTILLIHQSRNNQTTERLFAVIAVMTSDIICACLTNLPHVMCLNCLSSTLDQREDCMRNTVYLFGKSETILKILDQRGIPKITQSKTLSKYDEDIQN
Disordered Region (DISPRO)
**********NLNEEKFSEPASPCHRLVYAAAASLTCAVVMASLVPIKYFSLNATSPTIIAVAIKYSLDLNTVMPHKQDRLTKLSSAVFMCTVMGNTMPSLGAIETKELLMNIIALGILVSTMIVNICFQLGTGIIFVFWKEHAFIMLIMLVLLVIYFSALTVPINNQYLLLKHNKNLLKKFC***********SSLKLDISRFVLHVEGENELVDIIMKSNQDATDKWMQMGQKKQPEHLLQLLKQSNSQGFKGVLASNSIYKVSQTILLIHQSRNNQTTERLFAVIAVMTSDIICACLTNLPHVMCLNCLSSTLDQREDCMRNTVYLFGKSETILKILDQRGIPKITQSKTLSKYDEDIQ*
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiHHHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MGRLCCSTDGNLNEEKFSEPASPCHRLVYAAAASLTCAVVMASLVPIKYFSLNATSPTIIAVAIKYSLDLNTVMPHKQDRLTKLSSAVFMCTVMGNTMPSLGAIETKELLMNIIALGILVSTMIVNICFQLGTGIIFVFWKEHAFIMLIMLVLLVIYFSALTVPINNQYLLLKHNKNLLKKFCSISDDSRSESQSSLKLDISRFVLHVEGENELVDIIMKSNQDATDKWMQMGQKKQPEHLLQLLKQSNSQGFKGVLASNSIYKVSQTILLIHQSRNNQTTERLFAVIAVMTSDIICACLTNLPHVMCLNCLSSTLDQREDCMRNTVYLFGKSETILKILDQRGIPKITQSKTLSKYDEDIQN
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	363
255576086	747	conserved hypothetical protein [Ricinus	0.561	0.273	0.532	2e-52
224125204	724	predicted protein [Populus trichocarpa]	0.561	0.281	0.513	2e-51
225427009	754	PREDICTED: uncharacterized protein LOC10	0.465	0.224	0.557	3e-48
297741184	695	unnamed protein product [Vitis vinifera]	0.465	0.243	0.557	3e-48
147767483	754	hypothetical protein VITISV_043224 [Viti	0.465	0.224	0.551	2e-47
240255969	741	uncharacterized protein [Arabidopsis tha	0.542	0.265	0.486	5e-44
2245084	605	hypothetical protein [Arabidopsis thalia	0.542	0.325	0.486	5e-44
334186635	647	uncharacterized protein [Arabidopsis tha	0.542	0.304	0.486	5e-44
297804460	414	hypothetical protein ARALYDRAFT_493150 [	0.537	0.471	0.485	7e-44
147767481	287	hypothetical protein VITISV_043222 [Viti	0.465	0.588	0.530	3e-43

>gi|255576086|ref|XP_002528938.1| conserved hypothetical protein [Ricinus communis] gi|223531640|gb|EEF33467.1| conserved hypothetical protein [Ricinus communis]

 Score =  212 bits (539), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 116/218 (53%), Positives = 148/218 (67%), Gaps = 14/218 (6%)

Query: 1   MGRLCCSTDGNLNEEKFSEPASPCHRLVYAAAASLTCAVVMASLV-----------PIKY 49
           M +L C+ DGNLNE KFSEP       VY A ASL CA+ MA+ V           P K+
Sbjct: 1   MVKLGCTVDGNLNEAKFSEPLPWIG--VYIAVASLACAIAMAADVIHGCRYLKFWFPSKF 58

Query: 50  FSLNATSPTIIAVAIKYSLDLNTVMPHKQDRLTKLSSAVFMCTVMGNTMPSLGAIETKEL 109
             +NATS TIIAVAIK S+DLNT MP + D+LTKLSS V +CT+MGN+MPSLGA+E +E+
Sbjct: 59  ACINATSLTIIAVAIKLSVDLNTPMPRRVDQLTKLSSGVLICTLMGNSMPSLGAMENREI 118

Query: 110 LMNIIALGILVSTMIVNICFQLGTGIIFVFWKEHAFIMLIMLVLLVIY-FSALTVPINNQ 168
            MNI+ALGILV T+IVNIC QLGTG+I+++WKEHA  M  MLVLLVI  FSALTVP   +
Sbjct: 119 CMNIMALGILVITVIVNICIQLGTGVIYLYWKEHALTMFFMLVLLVILSFSALTVPTTKK 178

Query: 169 YLLLKHNKNLLKKFCSISDDSRSESQSSLKLDISRFVL 206
           YL  K+ K         S ++ S  ++ L+ D+ ++ +
Sbjct: 179 YLEFKYKKKFDMAVEESSIETSSPVENKLRQDLMKYWM 216

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224125204|ref|XP_002329919.1| predicted protein [Populus trichocarpa] gi|222871156|gb|EEF08287.1| predicted protein [Populus trichocarpa]

 Score =  209 bits (531), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 112/218 (51%), Positives = 140/218 (64%), Gaps = 14/218 (6%)

Query: 1   MGRLCCSTDGNLNEEKFSEPASPCHRLVYAAAASLTCAVVMAS-----------LVPIKY 49
           MG+L C  DG LNE KFS P       +Y A ASL CA+ MA+             P K+
Sbjct: 1   MGKLGCGIDGGLNEAKFSAPIPWIG--LYIAVASLACAIAMAADFIRGFRQQKFWFPSKF 58

Query: 50  FSLNATSPTIIAVAIKYSLDLNTVMPHKQDRLTKLSSAVFMCTVMGNTMPSLGAIETKEL 109
           FS+NATS TIIAVA+K S+DLNT MP + D+L KLSS   +CTVMGN+MPSLG ++  +L
Sbjct: 59  FSINATSLTIIAVAVKLSVDLNTAMPRRVDQLAKLSSGALLCTVMGNSMPSLGTMDNNDL 118

Query: 110 LMNIIALGILVSTMIVNICFQLGTGIIFVFWKEHAFIMLIMLVLLVIY-FSALTVPINNQ 168
             NIIALGILV T+IVN   QLGTG+I++ WKEHA IM +MLVLLVI  FSALTVP+  +
Sbjct: 119 YTNIIALGILVVTVIVNTGIQLGTGVIYLHWKEHALIMFLMLVLLVILSFSALTVPVTKK 178

Query: 169 YLLLKHNKNLLKKFCSISDDSRSESQSSLKLDISRFVL 206
           Y   K+NK         S+++       LK DI +F +
Sbjct: 179 YFQYKYNKKYGMALKEDSNETSKREDRELKEDIMKFWM 216

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225427009|ref|XP_002266701.1| PREDICTED: uncharacterized protein LOC100262529 [Vitis vinifera]

 Score =  198 bits (504), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 102/183 (55%), Positives = 129/183 (70%), Gaps = 14/183 (7%)

Query: 6   CSTDGNLNEEKFSEPASPCHRLVYAAAASLTCAVVMAS-----------LVPIKYFSLNA 54
           C+ DG++N+  F+EP       +Y AAASL C++ M +             P K+FSLNA
Sbjct: 6   CNIDGSVNDSNFNEPMPWIG--IYVAAASLVCSLAMGADAFLALRHKKFWFPCKFFSLNA 63

Query: 55  TSPTIIAVAIKYSLDLNTVMPHKQDRLTKLSSAVFMCTVMGNTMPSLGAIETKELLMNII 114
           TS TIIAVA K S+DLNT MP  QD+L+KLSS V MCTVMGN MPS+G +E KE+  N+I
Sbjct: 64  TSLTIIAVATKLSVDLNTSMPRCQDQLSKLSSTVMMCTVMGNFMPSIGTMENKEVFSNVI 123

Query: 115 ALGILVSTMIVNICFQLGTGIIFVFWKEHAFIMLIMLVLLVIY-FSALTVPINNQYLLLK 173
           ALGILV T++VN+C Q+GTG+I+V+WKEHA +M IMLVLL+I  FSALTVP    Y  LK
Sbjct: 124 ALGILVITLMVNVCIQMGTGVIYVYWKEHAVVMFIMLVLLLILSFSALTVPTTKHYFELK 183

Query: 174 HNK 176
           + K
Sbjct: 184 YRK 186

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297741184|emb|CBI31915.3| unnamed protein product [Vitis vinifera]

 Score =  198 bits (504), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 102/183 (55%), Positives = 129/183 (70%), Gaps = 14/183 (7%)

Query: 6   CSTDGNLNEEKFSEPASPCHRLVYAAAASLTCAVVMAS-----------LVPIKYFSLNA 54
           C+ DG++N+  F+EP       +Y AAASL C++ M +             P K+FSLNA
Sbjct: 6   CNIDGSVNDSNFNEPMPWIG--IYVAAASLVCSLAMGADAFLALRHKKFWFPCKFFSLNA 63

Query: 55  TSPTIIAVAIKYSLDLNTVMPHKQDRLTKLSSAVFMCTVMGNTMPSLGAIETKELLMNII 114
           TS TIIAVA K S+DLNT MP  QD+L+KLSS V MCTVMGN MPS+G +E KE+  N+I
Sbjct: 64  TSLTIIAVATKLSVDLNTSMPRCQDQLSKLSSTVMMCTVMGNFMPSIGTMENKEVFSNVI 123

Query: 115 ALGILVSTMIVNICFQLGTGIIFVFWKEHAFIMLIMLVLLVIY-FSALTVPINNQYLLLK 173
           ALGILV T++VN+C Q+GTG+I+V+WKEHA +M IMLVLL+I  FSALTVP    Y  LK
Sbjct: 124 ALGILVITLMVNVCIQMGTGVIYVYWKEHAVVMFIMLVLLLILSFSALTVPTTKHYFELK 183

Query: 174 HNK 176
           + K
Sbjct: 184 YRK 186

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147767483|emb|CAN71257.1| hypothetical protein VITISV_043224 [Vitis vinifera]

 Score =  196 bits (497), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 101/183 (55%), Positives = 128/183 (69%), Gaps = 14/183 (7%)

Query: 6   CSTDGNLNEEKFSEPASPCHRLVYAAAASLTCAVVMAS-----------LVPIKYFSLNA 54
           C+ DG++N+  F+ P       +Y AAASL C++ M +             P K+FSLNA
Sbjct: 6   CNIDGSVNDSNFNXPMPWIG--IYXAAASLVCSLAMGADAFXALRXKKFWFPCKFFSLNA 63

Query: 55  TSPTIIAVAIKYSLDLNTVMPHKQDRLTKLSSAVFMCTVMGNTMPSLGAIETKELLMNII 114
           TS TIIAVA K S+DLNT MP  QD+L+KLSS V MCTVMGN MPS+G +E KE+  N+I
Sbjct: 64  TSLTIIAVATKLSVDLNTSMPRCQDQLSKLSSTVXMCTVMGNFMPSIGTMENKEVFSNVI 123

Query: 115 ALGILVSTMIVNICFQLGTGIIFVFWKEHAFIMLIMLVLLVIY-FSALTVPINNQYLLLK 173
           ALGILV T++VN+C Q+GTG+I+V+WKEHA +M IMLVLL+I  FSALTVP    Y  LK
Sbjct: 124 ALGILVITLMVNVCIQMGTGVIYVYWKEHAVVMFIMLVLLLILSFSALTVPTTKHYFELK 183

Query: 174 HNK 176
           + K
Sbjct: 184 YRK 186

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|240255969|ref|NP_567526.4| uncharacterized protein [Arabidopsis thaliana] gi|16323155|gb|AAL15312.1| AT4g17250/dl4660w [Arabidopsis thaliana] gi|23506021|gb|AAN28870.1| At4g17250/dl4660w [Arabidopsis thaliana] gi|332658469|gb|AEE83869.1| uncharacterized protein [Arabidopsis thaliana]

 Score =  184 bits (468), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 105/216 (48%), Positives = 144/216 (66%), Gaps = 19/216 (8%)

Query: 6   CSTDGNLNEEKFSEPASPCHRLVYAAAASLTCAVVMAS-----------LVPIKYFSLNA 54
           C + GNL++ +FS+P       VY AAASL C V M S             P K+FSLNA
Sbjct: 3   CDSHGNLSDTEFSKPLPSIG--VYVAAASLICGVAMFSDLLHGFRHRKFWFPCKFFSLNA 60

Query: 55  TSPTIIAVAIKYSLDLNTVMPHKQDRLTKLSSAVFMCTVMGNTMPSLGAIETKELLMNII 114
           T+ T I+V +K SLDLNT MP +QD+L KLSS+VF+CTVM N+MPSLG + T++LLMN+ 
Sbjct: 61  TTLTFISVCVKLSLDLNTSMPSRQDQLAKLSSSVFVCTVMANSMPSLGYMVTQDLLMNLT 120

Query: 115 ALGILVSTMIVNICFQLGTGIIFVFWKEHAFIMLIMLVLLVIY-FSALTVPINNQYLLLK 173
           ALGILV T +VNIC QLGTG I+VF +EHA ++++ML++ +I  FSA+TVP   ++L LK
Sbjct: 121 ALGILVITDVVNICIQLGTGAIYVFPQEHALVIILMLLMFMILSFSAITVPATKRFLELK 180

Query: 174 HNKNL---LKKFCSISDDSRSESQSSLKLDISRFVL 206
           + K     LK+  S ++  R   +  LK D+ +F +
Sbjct: 181 YKKRYEFALKQCPSYTERRRGVPK--LKEDLMKFWM 214

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|2245084|emb|CAB10506.1| hypothetical protein [Arabidopsis thaliana] gi|7268477|emb|CAB78728.1| hypothetical protein [Arabidopsis thaliana]

 Score =  184 bits (467), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 105/216 (48%), Positives = 144/216 (66%), Gaps = 19/216 (8%)

Query: 6   CSTDGNLNEEKFSEPASPCHRLVYAAAASLTCAVVMAS-----------LVPIKYFSLNA 54
           C + GNL++ +FS+P       VY AAASL C V M S             P K+FSLNA
Sbjct: 3   CDSHGNLSDTEFSKPLPSIG--VYVAAASLICGVAMFSDLLHGFRHRKFWFPCKFFSLNA 60

Query: 55  TSPTIIAVAIKYSLDLNTVMPHKQDRLTKLSSAVFMCTVMGNTMPSLGAIETKELLMNII 114
           T+ T I+V +K SLDLNT MP +QD+L KLSS+VF+CTVM N+MPSLG + T++LLMN+ 
Sbjct: 61  TTLTFISVCVKLSLDLNTSMPSRQDQLAKLSSSVFVCTVMANSMPSLGYMVTQDLLMNLT 120

Query: 115 ALGILVSTMIVNICFQLGTGIIFVFWKEHAFIMLIMLVLLVIY-FSALTVPINNQYLLLK 173
           ALGILV T +VNIC QLGTG I+VF +EHA ++++ML++ +I  FSA+TVP   ++L LK
Sbjct: 121 ALGILVITDVVNICIQLGTGAIYVFPQEHALVIILMLLMFMILSFSAITVPATKRFLELK 180

Query: 174 HNKNL---LKKFCSISDDSRSESQSSLKLDISRFVL 206
           + K     LK+  S ++  R   +  LK D+ +F +
Sbjct: 181 YKKRYEFALKQCPSYTERRRGVPK--LKEDLMKFWM 214

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|334186635|ref|NP_001190749.1| uncharacterized protein [Arabidopsis thaliana] gi|332658470|gb|AEE83870.1| uncharacterized protein [Arabidopsis thaliana]

 Score =  184 bits (467), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 105/216 (48%), Positives = 144/216 (66%), Gaps = 19/216 (8%)

Query: 6   CSTDGNLNEEKFSEPASPCHRLVYAAAASLTCAVVMAS-----------LVPIKYFSLNA 54
           C + GNL++ +FS+P       VY AAASL C V M S             P K+FSLNA
Sbjct: 3   CDSHGNLSDTEFSKPLPSIG--VYVAAASLICGVAMFSDLLHGFRHRKFWFPCKFFSLNA 60

Query: 55  TSPTIIAVAIKYSLDLNTVMPHKQDRLTKLSSAVFMCTVMGNTMPSLGAIETKELLMNII 114
           T+ T I+V +K SLDLNT MP +QD+L KLSS+VF+CTVM N+MPSLG + T++LLMN+ 
Sbjct: 61  TTLTFISVCVKLSLDLNTSMPSRQDQLAKLSSSVFVCTVMANSMPSLGYMVTQDLLMNLT 120

Query: 115 ALGILVSTMIVNICFQLGTGIIFVFWKEHAFIMLIMLVLLVIY-FSALTVPINNQYLLLK 173
           ALGILV T +VNIC QLGTG I+VF +EHA ++++ML++ +I  FSA+TVP   ++L LK
Sbjct: 121 ALGILVITDVVNICIQLGTGAIYVFPQEHALVIILMLLMFMILSFSAITVPATKRFLELK 180

Query: 174 HNKNL---LKKFCSISDDSRSESQSSLKLDISRFVL 206
           + K     LK+  S ++  R   +  LK D+ +F +
Sbjct: 181 YKKRYEFALKQCPSYTERRRGVPK--LKEDLMKFWM 214

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297804460|ref|XP_002870114.1| hypothetical protein ARALYDRAFT_493150 [Arabidopsis lyrata subsp. lyrata] gi|297315950|gb|EFH46373.1| hypothetical protein ARALYDRAFT_493150 [Arabidopsis lyrata subsp. lyrata]

 Score =  184 bits (466), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 104/214 (48%), Positives = 144/214 (67%), Gaps = 19/214 (8%)

Query: 6   CSTDGNLNEEKFSEPASPCHRLVYAAAASLTCAVVMAS-----------LVPIKYFSLNA 54
           C + GNL++ +FS+P       VY AAAS+ C V M S             P K+FSLNA
Sbjct: 3   CDSHGNLSDTEFSKPLPSIG--VYVAAASVICGVAMFSDLLHGLRHRKFWFPCKFFSLNA 60

Query: 55  TSPTIIAVAIKYSLDLNTVMPHKQDRLTKLSSAVFMCTVMGNTMPSLGAIETKELLMNII 114
           T+ T I+V +K SLDLNT MP +QD+L KLSS+VF+CTVM N+MPSLG + T++LLMN++
Sbjct: 61  TTLTFISVCVKLSLDLNTPMPSRQDQLAKLSSSVFVCTVMANSMPSLGFMVTQDLLMNLV 120

Query: 115 ALGILVSTMIVNICFQLGTGIIFVFWKEHAFIMLIMLVLLVIY-FSALTVPINNQYLLLK 173
           ALGILV T +VNIC QLGTG I+VF +EHA ++++ML++ +I  FSA+TVP   ++L LK
Sbjct: 121 ALGILVITDVVNICIQLGTGAIYVFTQEHALVIVLMLLMFMILSFSAITVPATKRFLELK 180

Query: 174 HNKNL---LKKFCSISDDSRSESQSSLKLDISRF 204
           + K     LK+  S ++  R   +  LK D+ +F
Sbjct: 181 YKKRYEFALKQCPSYTERRRGVPK--LKEDLMKF 212

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147767481|emb|CAN71255.1| hypothetical protein VITISV_043222 [Vitis vinifera]

 Score =  182 bits (461), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 97/183 (53%), Positives = 122/183 (66%), Gaps = 14/183 (7%)

Query: 6   CSTDGNLNEEKFSEPASPCHRLVYAAAASLTCAVVMAS-----------LVPIKYFSLNA 54
           CS  G++N+  F+EP       +Y AAASL C++ M +             P K FSLN 
Sbjct: 38  CSIHGSVNDSNFNEPMPWIG--IYVAAASLVCSLAMGADAFLAFRHTKFWFPCKVFSLNV 95

Query: 55  TSPTIIAVAIKYSLDLNTVMPHKQDRLTKLSSAVFMCTVMGNTMPSLGAIETKELLMNII 114
           TS TIIAVA   S+DLNT MP  QD+L+KLSS V MCTVMGN MPS+G  E KE+  N+I
Sbjct: 96  TSLTIIAVATNLSVDLNTSMPRCQDQLSKLSSTVLMCTVMGNFMPSIGTTENKEVFSNVI 155

Query: 115 ALGILVSTMIVNICFQLGTGIIFVFWKEHAFIMLIMLVLLVIY-FSALTVPINNQYLLLK 173
           AL IL+ T++VN+C ++GTG+I+VFWKEHA +M IMLVLL+I  FSALTVP    Y   K
Sbjct: 156 ALDILMITLMVNVCIKMGTGVIYVFWKEHAVLMFIMLVLLLILSFSALTVPTTKHYFEFK 215

Query: 174 HNK 176
           + K
Sbjct: 216 YCK 218

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	363
TAIR|locus:2130754	741	AT4G17250 "AT4G17250" [Arabido	0.432	0.211	0.532	3.6e-54
TAIR|locus:2169018	748	ASG7 "AT5G47580" [Arabidopsis	0.446	0.216	0.522	4.6e-54

TAIR|locus:2130754 AT4G17250 "AT4G17250" [Arabidopsis thaliana (taxid:3702)]

 Score = 395 (144.1 bits), Expect = 3.6e-54, Sum P(2) = 3.6e-54
 Identities = 91/171 (53%), Positives = 114/171 (66%)

Query:     6 CSTDGNLNEEKFSEPASPCHRLVYAAAASLTCAVVMAS-LV----------PIKYFSLNA 54
             C + GNL++ +FS+P       VY AAASL C V M S L+          P K+FSLNA
Sbjct:     3 CDSHGNLSDTEFSKPLPSIG--VYVAAASLICGVAMFSDLLHGFRHRKFWFPCKFFSLNA 60

Query:    55 TSPTIIAVAIKYSLDLNTVMPHKQDRLTKLSSAVFMCTVMGNTMPSLGAIETKELLMNII 114
             T+ T I+V +K SLDLNT MP +QD+L KLSS+VF+CTVM N+MPSLG + T++LLMN+ 
Sbjct:    61 TTLTFISVCVKLSLDLNTSMPSRQDQLAKLSSSVFVCTVMANSMPSLGYMVTQDLLMNLT 120

Query:   115 ALGILVSTMIVNICFQLGTGIIFVFWKEHAFXXXXXXXXXXXY-FSALTVP 164
             ALGILV T +VNIC QLGTG I+VF +EHA              FSA+TVP
Sbjct:   121 ALGILVITDVVNICIQLGTGAIYVFPQEHALVIILMLLMFMILSFSAITVP 171

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0010286 "heat acclimation" evidence=IEP

GO:0006914 "autophagy" evidence=RCA

TAIR|locus:2169018 ASG7 "AT5G47580" [Arabidopsis thaliana (taxid:3702)]

 Score = 402 (146.6 bits), Expect = 4.6e-54, Sum P(2) = 4.6e-54
 Identities = 92/176 (52%), Positives = 114/176 (64%)

Query:     1 MGRLCCSTDGNLNEEKFSEPASPCHRLVYAAAASLTCAVVMAS-LV----------PIKY 49
             MG L C   G+LN+ +FS+P       +Y A ASL C + MA+ L+          P K+
Sbjct:     1 MGILGCDAHGDLNDAEFSKPLPSIG--IYVAVASLICGLAMAADLIHGFRHRKFWFPCKF 58

Query:    50 FSLNATSPTIIAVAIKYSLDLNTVMPHKQDRLTKLSSAVFMCTVMGNTMPSLGAIETKEL 109
             FSLNATS T IAV IK S+DLNT MP +QD+L KLSS VF+CTVMGN+MPSLG ++  +L
Sbjct:    59 FSLNATSLTFIAVGIKLSVDLNTSMPSRQDQLAKLSSTVFVCTVMGNSMPSLGIMDNNDL 118

Query:   110 LMNIIALGILVSTMIVNICFQLGTGIIFVFWKEHAFXXXXXXXXXXXY-FSALTVP 164
             LMN++ALGILV T +VNIC QLGTG I+VF +EH               FSA TVP
Sbjct:   119 LMNLMALGILVITDVVNICIQLGTGAIYVFSEEHFLVVLLMLLMLMILCFSATTVP 174

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0005739 "mitochondrion" evidence=IDA

GO:0006487 "protein N-linked glycosylation" evidence=RCA

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Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

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Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: GSVIVG00009611001 SubName- Full=Chromosome chr2 scaffold_241, whole genome shotgun sequence; (365 aa) (Vitis vinifera)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

No hit with probability above 80.00

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	363
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-06
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-04

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 48.7 bits (115), Expect = 2e-06
 Identities = 51/380 (13%), Positives = 115/380 (30%), Gaps = 139/380 (36%)

Query: 75  PHKQDR--LTKLSSAVFMCTVMGNTMPSLGAIETKELLMNIIALGILVSTMIVNICFQLG 132
           P+ + R  L +L  A  +  + G  +   G    K             + + +++C    
Sbjct: 136 PYLKLRQALLELRPAKNV-LIDG--VLGSG----K-------------TWVALDVCLSYK 175

Query: 133 TGIIF---VFW------KEHAFIMLIMLVLLVI----------YFSALTVPINN------ 167
                   +FW           ++ ++  LL            + S + + I++      
Sbjct: 176 VQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELR 235

Query: 168 ------QY----LLLKH--NKNLLKKF---C---------SISDDSRSESQSSLKLDISR 203
                  Y    L+L +  N      F   C          ++D   + + + + LD   
Sbjct: 236 RLLKSKPYENCLLVLLNVQNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHS 295

Query: 204 FVLHVEGENELVDIIMKSNQDATDKWMQMGQKKQPE-----HLLQL------LKQSNS-- 250
             L     +E+  +++K        ++    +  P      +  +L      ++   +  
Sbjct: 296 MTLT---PDEVKSLLLK--------YLDCRPQDLPREVLTTNPRRLSIIAESIRDGLATW 344

Query: 251 QGFKGVLASNSIYKVSQTILLIHQSRNNQTTE---RLFAVIAVMTSDIICACLTNLP-HV 306
             +K V    +  K++  I     S N        ++F  ++V           ++P  +
Sbjct: 345 DNWKHV----NCDKLTTII---ESSLNVLEPAEYRKMFDRLSVFPPS------AHIPTIL 391

Query: 307 MCL---------------NCLSSTLDQREDCMRNTVYLFG---------KSETIL--KIL 340
           + L                    +L +++    +T+ +           ++E  L   I+
Sbjct: 392 LSLIWFDVIKSDVMVVVNKLHKYSLVEKQPK-ESTISIPSIYLELKVKLENEYALHRSIV 450

Query: 341 DQRGIPKITQSKTLSKYDED 360
           D   IPK   S  L     D
Sbjct: 451 DHYNIPKTFDSDDLIPPYLD 470

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 42.5 bits (99), Expect = 2e-04
 Identities = 45/322 (13%), Positives = 96/322 (29%), Gaps = 95/322 (29%)

Query: 73  VMPHKQDRLTKLSSAVFMCTVMGNTMPSLGAIETKELLMNIIALG--ILVSTMIVNICFQ 130
           ++   +D         F C    +      +I +KE + +II     +  +  +      
Sbjct: 21  ILSVFEDAFVD----NFDCK---DVQDMPKSILSKEEIDHIIMSKDAVSGTLRLFWTLLS 73

Query: 131 LGTGIIFVFWKE-----HAFIM-----------LIMLVLLVIYFSALTVPINNQYLLLKH 174
               ++  F +E     + F+M           ++      +Y        N+  +  K+
Sbjct: 74  KQEEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMT----RMYIEQRDRLYNDNQVFAKY 129

Query: 175 NKNLLKKFCSISDDSRSESQSSL-KLDISRFVLHVEGENELVDIIM----KS-------- 221
           N + L+ +  +        + +L +L  ++ VL ++G        +    K+        
Sbjct: 130 NVSRLQPYLKL--------RQALLELRPAKNVL-IDG--------VLGSGKTWVALDVCL 172

Query: 222 NQDATDK------WMQMGQKKQPEHLLQLLK-----------QSNSQGFKGVLASNSIYK 264
           +     K      W+ +     PE +L++L+             +       L  +SI  
Sbjct: 173 SYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQA 232

Query: 265 VSQTILLIHQSRN---------NQTTERLFAV---IAVMTSD--IICACLTNLPHVMCLN 310
             + +L      N         N      F +   I + T    +           + L+
Sbjct: 233 ELRRLLKSKPYENCLLVLLNVQNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHISLD 292

Query: 311 CLSSTLDQREDCMRNTVYLFGK 332
             S TL   E        L  K
Sbjct: 293 HHSMTLTPDE-----VKSLLLK 309

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00