Citrus Sinensis ID: 043708
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 254 | ||||||
| 255558498 | 802 | ATP binding protein, putative [Ricinus c | 0.944 | 0.299 | 0.395 | 1e-52 | |
| 118485999 | 817 | unknown [Populus trichocarpa] | 0.929 | 0.288 | 0.378 | 1e-47 | |
| 15226271 | 770 | putative methyltransferase PMT25 [Arabid | 0.948 | 0.312 | 0.369 | 1e-41 | |
| 110743762 | 770 | hypothetical protein [Arabidopsis thalia | 0.948 | 0.312 | 0.369 | 2e-41 | |
| 297826893 | 773 | hypothetical protein ARALYDRAFT_482372 [ | 0.948 | 0.311 | 0.359 | 2e-40 | |
| 356516372 | 806 | PREDICTED: probable methyltransferase PM | 0.921 | 0.290 | 0.344 | 2e-37 | |
| 356508961 | 810 | PREDICTED: probable methyltransferase PM | 0.929 | 0.291 | 0.331 | 7e-37 | |
| 12323540 | 768 | unknown protein; 55790-52851 [Arabidopsi | 0.921 | 0.304 | 0.346 | 4e-36 | |
| 30690755 | 770 | putative methyltransferase PMT24 [Arabid | 0.921 | 0.303 | 0.346 | 4e-36 | |
| 110742309 | 770 | hypothetical protein [Arabidopsis thalia | 0.921 | 0.303 | 0.346 | 7e-36 |
| >gi|255558498|ref|XP_002520274.1| ATP binding protein, putative [Ricinus communis] gi|223540493|gb|EEF42060.1| ATP binding protein, putative [Ricinus communis] | Back alignment and taxonomy information |
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Score = 212 bits (539), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 146/369 (39%), Positives = 183/369 (49%), Gaps = 129/369 (34%)
Query: 12 FLIVVTVVVFVGLCLVGVWMLMSSSVVP-------------------------------- 39
+ + VVVFV LCLVGVWMLMSS+V P
Sbjct: 17 YFSTIAVVVFVALCLVGVWMLMSSTVAPVQNSNSPSQETVNEVKQTGSENTSKQFEDSSG 76
Query: 40 ----DSTNGDGDDVPVEKSENR----------------VEDNQEEKYMSEGDGEMSESKN 79
D+T DG + +SEN+ VEDN+EEK +E E +ES
Sbjct: 77 DLPEDATKEDGTAI-YSQSENQSGQDDQNMNIIEKETAVEDNKEEKAETENQDEKTESLE 135
Query: 80 MVNQNQEENIVKESFD-----------ENTESEEES-KAVSENDDGRKREDE-------- 119
+ E + ++ D E TESEE S + SE D+G K D+
Sbjct: 136 EPKKEAENDGDGKTGDGEAEGGETNKSEQTESEEASGENKSEFDEGGKDSDKGENTDENG 195
Query: 120 ---------ESKNQDNDTESRGKDQASTEIFPSGDQSKILKETNAQNGAWSTQPIESQNE 170
E + +N+ ES+ KDQAS E+FP+G QS++L ET+AQNGAWSTQ +ESQNE
Sbjct: 196 QEEKDGKQGEQSSNENNMESQEKDQASVEVFPAGSQSELLNETDAQNGAWSTQAVESQNE 255
Query: 171 TISQQSSIFKDQYGHRWKI---------------W----------------RYCPEEACT 199
SQQSSI KDQY H WK+ W R+CPEEA T
Sbjct: 256 KKSQQSSISKDQYAHGWKLCNVTAGPDYIPCLDNWQAIRKLPSTKHYEHRERHCPEEAPT 315
Query: 200 SIAPLPEGYKRSIKWPKSRDRIWYYNFPHTKLSEVK----------------GGETQFEN 243
+ P+PEGY+RSIKWPKSR++IWYYN PHTKL+EVK GG TQF++
Sbjct: 316 CLVPVPEGYRRSIKWPKSREKIWYYNVPHTKLAEVKGHQNWVKVTGEYLTFPGGGTQFKH 375
Query: 244 GALHYIDFI 252
GALHYIDFI
Sbjct: 376 GALHYIDFI 384
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Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|118485999|gb|ABK94843.1| unknown [Populus trichocarpa] | Back alignment and taxonomy information |
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| >gi|15226271|ref|NP_180977.1| putative methyltransferase PMT25 [Arabidopsis thaliana] gi|79324263|ref|NP_001031477.1| putative methyltransferase PMT25 [Arabidopsis thaliana] gi|292630954|sp|Q0WT31.2|PMTP_ARATH RecName: Full=Probable methyltransferase PMT25 gi|3337361|gb|AAC27406.1| unknown protein [Arabidopsis thaliana] gi|330253856|gb|AEC08950.1| putative methyltransferase PMT25 [Arabidopsis thaliana] gi|330253857|gb|AEC08951.1| putative methyltransferase PMT25 [Arabidopsis thaliana] | Back alignment and taxonomy information |
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| >gi|110743762|dbj|BAE99717.1| hypothetical protein [Arabidopsis thaliana] gi|222424409|dbj|BAH20160.1| AT2G34300 [Arabidopsis thaliana] | Back alignment and taxonomy information |
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| >gi|297826893|ref|XP_002881329.1| hypothetical protein ARALYDRAFT_482372 [Arabidopsis lyrata subsp. lyrata] gi|297327168|gb|EFH57588.1| hypothetical protein ARALYDRAFT_482372 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
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| >gi|356516372|ref|XP_003526869.1| PREDICTED: probable methyltransferase PMT26-like [Glycine max] | Back alignment and taxonomy information |
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| >gi|356508961|ref|XP_003523221.1| PREDICTED: probable methyltransferase PMT26-like [Glycine max] | Back alignment and taxonomy information |
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| >gi|12323540|gb|AAG51752.1|AC068667_31 unknown protein; 55790-52851 [Arabidopsis thaliana] | Back alignment and taxonomy information |
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| >gi|30690755|ref|NP_174240.2| putative methyltransferase PMT24 [Arabidopsis thaliana] gi|79318852|ref|NP_001031109.1| putative methyltransferase PMT24 [Arabidopsis thaliana] gi|75223284|sp|Q6NPR7.1|PMTO_ARATH RecName: Full=Probable methyltransferase PMT24 gi|38564284|gb|AAR23721.1| At1g29470 [Arabidopsis thaliana] gi|332192972|gb|AEE31093.1| putative methyltransferase PMT24 [Arabidopsis thaliana] gi|332192973|gb|AEE31094.1| putative methyltransferase PMT24 [Arabidopsis thaliana] | Back alignment and taxonomy information |
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| >gi|110742309|dbj|BAE99079.1| hypothetical protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
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Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 254 | ||||||
| TAIR|locus:2040864 | 770 | AT2G34300 [Arabidopsis thalian | 0.791 | 0.261 | 0.340 | 2e-21 | |
| TAIR|locus:2013628 | 770 | AT1G29470 [Arabidopsis thalian | 0.787 | 0.259 | 0.334 | 2.6e-21 | |
| TAIR|locus:2080823 | 895 | AT3G51070 [Arabidopsis thalian | 0.803 | 0.227 | 0.324 | 9e-21 | |
| TAIR|locus:2160806 | 829 | AT5G64030 [Arabidopsis thalian | 0.795 | 0.243 | 0.296 | 5.7e-17 | |
| TAIR|locus:2063078 | 589 | AT2G40280 [Arabidopsis thalian | 0.251 | 0.108 | 0.45 | 1.3e-11 | |
| TAIR|locus:2195955 | 655 | AT1G77260 [Arabidopsis thalian | 0.188 | 0.073 | 0.520 | 1.2e-10 | |
| TAIR|locus:2063947 | 694 | AT2G39750 [Arabidopsis thalian | 0.480 | 0.175 | 0.315 | 3.2e-09 | |
| TAIR|locus:2153704 | 682 | AT5G06050 [Arabidopsis thalian | 0.472 | 0.175 | 0.347 | 1.2e-08 | |
| TAIR|locus:2129660 | 608 | AT4G14360 [Arabidopsis thalian | 0.228 | 0.095 | 0.420 | 8.4e-07 | |
| TAIR|locus:2090935 | 611 | AT3G23300 [Arabidopsis thalian | 0.228 | 0.094 | 0.420 | 2e-06 |
| TAIR|locus:2040864 AT2G34300 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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Score = 261 (96.9 bits), Expect = 2.0e-21, P = 2.0e-21
Identities = 82/241 (34%), Positives = 116/241 (48%)
Query: 40 DSTNGDGDDVPVEKSENRVEDNQEEKYMSEGDGEMSESKNMVNQNQEENIVKXXXXXXXX 99
D NGDGD EK +N E SE D + K + ++ EEN +
Sbjct: 124 DDNNGDGDG---EKEKNVKEVG------SESDETTQKEKTQLEESTEENKSEDGNGNEEK 174
Query: 100 XXXXXKAVSENDDGRKREDEESKNQDNDT-ESRGKDQA-STEIFPSGDQSKILKETNAQN 157
E+ + +E + +Q T ES D A ST++ S ++ K + + +++
Sbjct: 175 AEENASETEESTEKSSKEVFPAGDQAEITKESSTGDGAWSTQLVESQNEKKAQQSSISKD 234
Query: 158 GA---WSTQPIESQNETI---SQQSSIFK----DQYGHRWKIWRYCPEEACTSIAPLPEG 207
+ W T + + + I +I K Y HR R+CPEE+ + LP+G
Sbjct: 235 QSSYGWKTCNVTAGPDYIPCLDNWQAIKKLHTTMHYEHRE---RHCPEESPHCLVSLPDG 291
Query: 208 YKRSIKWPKSRDRIWYYNFPHTKLSEVKG----------------GETQFENGALHYIDF 251
YKRSIKWPKSR++IWY N PHTKL+E+KG G TQF+NGALHYIDF
Sbjct: 292 YKRSIKWPKSREKIWYNNVPHTKLAEIKGHQNWVKMSGEHLTFPGGGTQFKNGALHYIDF 351
Query: 252 I 252
I
Sbjct: 352 I 352
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| TAIR|locus:2013628 AT1G29470 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2080823 AT3G51070 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2160806 AT5G64030 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2063078 AT2G40280 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2195955 AT1G77260 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2063947 AT2G39750 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2153704 AT5G06050 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2129660 AT4G14360 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2090935 AT3G23300 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 254 | |||
| pfam03141 | 506 | pfam03141, Methyltransf_29, Putative S-adenosyl-L- | 2e-21 |
| >gnl|CDD|217386 pfam03141, Methyltransf_29, Putative S-adenosyl-L-methionine-dependent methyltransferase | Back alignment and domain information |
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Score = 92.4 bits (230), Expect = 2e-21
Identities = 43/109 (39%), Positives = 55/109 (50%), Gaps = 23/109 (21%)
Query: 164 PIESQNETISQQSSIFKDQYGHRWKIWRYCP--EEACTSIAPLPEGYKRSIKWPKSRDRI 221
P + I S ++ HR R+CP EE + P P+GYK I WPKSRD++
Sbjct: 4 PCLDNDRAIKFLLSR--ERMEHRE---RHCPPSEEKLRCLVPPPDGYKTPIPWPKSRDKV 58
Query: 222 WYYNFPHTKLSEVK----------------GGETQFENGALHYIDFILK 254
WY N PHTKL+E K GG TQF +GA YIDF+ +
Sbjct: 59 WYANVPHTKLAEEKGGQNWVKVEGDKFRFPGGGTQFPHGADAYIDFLAQ 107
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This family is a putative S-adenosyl-L-methionine (SAM)-dependent methyltransferase. Length = 506 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 254 | |||
| PF03141 | 506 | Methyltransf_29: Putative S-adenosyl-L-methionine- | 99.95 |
| >PF03141 Methyltransf_29: Putative S-adenosyl-L-methionine-dependent methyltransferase; InterPro: IPR004159 Members of this family of hypothetical plant proteins are putative methyltransferases | Back alignment and domain information |
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Probab=99.95 E-value=1.3e-29 Score=242.33 Aligned_cols=71 Identities=52% Similarity=0.866 Sum_probs=65.7
Q ss_pred ccceeEeccCCC--CCCcccccCCCCCCCCCCCCCccccccccCCCCcccccccc----------------CCCcCcCcH
Q 043708 184 GHRWKIWRYCPE--EACTSIAPLPEGYKRSIKWPKSRDRIWYYNFPHTKLSEVKG----------------GETQFENGA 245 (254)
Q Consensus 184 ~y~WkLcRHCPe--e~~~CLVPpP~GYK~PIrWPkSRDkIWy~NVPHTkLae~KG----------------GGTqF~~GA 245 (254)
...=.++||||. ++++||||+|+|||+||+||+|||+|||+||||++|+++|+ |||||++||
T Consensus 19 ~~~~~rERhCP~~~~~~~CLVp~P~gYk~P~~WP~SRd~iW~~Nvph~~L~~~K~~qnWv~~~gd~~~FPgggt~F~~Ga 98 (506)
T PF03141_consen 19 ERMEHRERHCPPPEERLRCLVPPPKGYKTPIPWPKSRDYIWYANVPHTKLAEEKADQNWVRVEGDKFRFPGGGTMFPHGA 98 (506)
T ss_pred ccccEeeccCcCCCCCCccccCCCccCCCCCCCCcccceeeecccCchHHhhhcccccceeecCCEEEeCCCCccccCCH
Confidence 344568999995 89999999999999999999999999999999999999994 999999999
Q ss_pred HHHHHHhhC
Q 043708 246 LHYIDFILK 254 (254)
Q Consensus 246 ~~YID~IaE 254 (254)
++|||+|++
T Consensus 99 ~~Yid~i~~ 107 (506)
T PF03141_consen 99 DHYIDQIAE 107 (506)
T ss_pred HHHHHHHHH
Confidence 999999974
|
; GO: 0008168 methyltransferase activity |
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
No hit with e-value below 0.005
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
No hit with probability above 80.00
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
No hit with probability above 80.00