Citrus Sinensis ID: 043708


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250----
MRLMRMPSIQKFLIVVTVVVFVGLCLVGVWMLMSSSVVPDSTNGDGDDVPVEKSENRVEDNQEEKYMSEGDGEMSESKNMVNQNQEENIVKESFDENTESEEESKAVSENDDGRKREDEESKNQDNDTESRGKDQASTEIFPSGDQSKILKETNAQNGAWSTQPIESQNETISQQSSIFKDQYGHRWKIWRYCPEEACTSIAPLPEGYKRSIKWPKSRDRIWYYNFPHTKLSEVKGGETQFENGALHYIDFILK
ccccccccccccHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccHHcccccccccccccccccccccccccccccccccccHHHHcccccccccccccccHHcccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHc
cccccccccccHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHccccHHccHHHHHHHcccccccccccccccccccccccccccccEEEHcccccHHHEEEccccccccccHHHHHHHHcc
mrlmrmpsiQKFLIVVTVVVFVGLCLVGVWMLMsssvvpdstngdgddvpveksenrvednqeekymsegdgemsesKNMVNQNQEENIVKesfdenteseeeskavsenddgrkredeesknqdndtesrgkdqasteifpsgdqskILKEtnaqngawstqpiesqnetisQQSSIFkdqyghrwkiwrycpeeactsiaplpegykrsikwpksrdriwyynfphtklsevkggetqfengALHYIDFILK
mrlmrmpsiQKFLIVVTVVVFVGLCLVGVWMLMSSsvvpdstngdgddvpveksenrvednqeekymsegdgemseSKNMVNQNQEENIVKEsfdenteseeeskavsenddgrkredeesknqdndtesrgkdqasteifpsgdqskILKETNAQNGAWSTQPIESQNETISQQSSIFKDQYGHRWKIWRYCPEEActsiaplpegykrsikwpksrdRIWYYNFPhtklsevkggetqfengalhyiDFILK
MRLMRMPSIQKFLIvvtvvvfvglclvgvWMLMSSSVVPDSTNGDGDDVPVEKSENRVEDNQEEKYMSEGDGEMSESKNMVNQNQEENIVKesfdenteseeesKAVSENDDGRKREDEESKNQDNDTESRGKDQASTEIFPSGDQSKILKETNAQNGAWSTQPIESQNETISQQSSIFKDQYGHRWKIWRYCPEEACTSIAPLPEGYKRSIKWPKSRDRIWYYNFPHTKLSEVKGGETQFENGALHYIDFILK
********IQKFLIVVTVVVFVGLCLVGVWMLMS***********************************************************************************************************************************************IFKDQYGHRWKIWRYCPEEACTSIAPLPEGYKRSIKWPKSRDRIWYYNFPHTKLSEVKGGETQFENGALHYIDFIL*
***********FLIVVTVVVFVGLCLVGVWML*******************************************************************************************************************************WSTQPIESQ******************WKIWRYCPEEACTSIAPLPEGYKRSIKWPKSRDRIWYYNFPHTKLSEVKGGETQFENGALHYIDFIL*
MRLMRMPSIQKFLIVVTVVVFVGLCLVGVWMLMSSSVV*******************************************NQNQEENIVKE********************************************STEIFPSGDQSKILKETNAQNGAWSTQPIESQNETISQQSSIFKDQYGHRWKIWRYCPEEACTSIAPLPEGYKRSIKWPKSRDRIWYYNFPHTKLSEVKGGETQFENGALHYIDFILK
*****MPSIQKFLIVVTVVVFVGLCLVGVWMLMS*****************************************************************************************************************************WSTQPIESQNETISQQSSIFKDQYGHRWKIWRYCPEEACTSIAPLPEGYKRSIKWPKSRDRIWYYNFPHTKLSEVKGGETQFENGALHYIDFILK
iiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MRLMRMPSIQKFLIVVTVVVFVGLCLVGVWMLMSSSVVPDSTNGDGDDVPVEKSENRVEDNQEEKYMSEGDGEMSESKNMVNQNQEENIVKESFDENTESEEESKAVSENDDGRKREDEESKNQDNDTESRGKDQASTEIFPSGDQSKILKETNAQNGAWSTQPIESQNETISQQSSIFKDQYGHRWKIWRYCPEEACTSIAPLPEGYKRSIKWPKSRDRIWYYNFPHTKLSEVKGGETQFENGALHYIDFILK
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query254 2.2.26 [Sep-21-2011]
Q0WT31 770 Probable methyltransferas yes no 0.948 0.312 0.369 2e-43
Q6NPR7 770 Probable methyltransferas no no 0.921 0.303 0.346 7e-38
Q8L7V3 829 Probable methyltransferas no no 0.956 0.293 0.289 6e-33
Q9SD39 895 Probable methyltransferas no no 0.767 0.217 0.333 6e-22
Q9LYN3 610 Probable methyltransferas no no 0.251 0.104 0.45 2e-13
Q9SIZ3 589 Probable methyltransferas no no 0.244 0.105 0.448 6e-13
Q94KE1 655 Probable methyltransferas no no 0.244 0.094 0.423 4e-12
O22285 694 Probable methyltransferas no no 0.236 0.086 0.410 2e-10
Q9FG39 682 Probable methyltransferas no no 0.228 0.085 0.412 1e-09
Q93YV7 608 Probable methyltransferas no no 0.228 0.095 0.420 2e-08
>sp|Q0WT31|PMTP_ARATH Probable methyltransferase PMT25 OS=Arabidopsis thaliana GN=At2g34300 PE=1 SV=2 Back     alignment and function desciption
 Score =  175 bits (444), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 124/336 (36%), Positives = 170/336 (50%), Gaps = 95/336 (28%)

Query: 12  FLIVVTVVVFVGLCLVGVWMLMSSSVVP-DSTNGDGDDVPVEKSENRV---EDNQEEKYM 67
           + + +T+V+ + LCLVG WM MSS   P DS      D   + S+N +   E +++ K  
Sbjct: 17  YGLTITIVLLLSLCLVGTWMFMSSWSAPADSAGYSSTDTAKDVSKNDLRKEEGDRDPKNF 76

Query: 68  SEGDGEMSESKNMVNQ-------NQEENIVKESFDENTESEEESKAVSEND---DGRKRE 117
           S+   E +E+    NQ       + E N V ES  E TE+ EE K   +N+   DG K +
Sbjct: 77  SDEKNEENEAATENNQVKTDSENSAEGNQVNESSGEKTEAGEERKESDDNNGDGDGEKEK 136

Query: 118 D-----------------------EESKNQD-NDTESRGKDQA----------STEIFPS 143
           +                       EE+K++D N  E + ++ A          S E+FP+
Sbjct: 137 NVKEVGSESDETTQKEKTQLEESTEENKSEDGNGNEEKAEENASETEESTEKSSKEVFPA 196

Query: 144 GDQSKILKETNAQNGAWSTQPIESQNETISQQSSIFKDQYGHRWKI-------------- 189
           GDQ++I KE++  +GAWSTQ +ESQNE  +QQSSI KDQ  + WK               
Sbjct: 197 GDQAEITKESSTGDGAWSTQLVESQNEKKAQQSSISKDQSSYGWKTCNVTAGPDYIPCLD 256

Query: 190 -W----------------RYCPEEACTSIAPLPEGYKRSIKWPKSRDRIWYYNFPHTKLS 232
            W                R+CPEE+   +  LP+GYKRSIKWPKSR++IWY N PHTKL+
Sbjct: 257 NWQAIKKLHTTMHYEHRERHCPEESPHCLVSLPDGYKRSIKWPKSREKIWYNNVPHTKLA 316

Query: 233 EVK----------------GGETQFENGALHYIDFI 252
           E+K                GG TQF+NGALHYIDFI
Sbjct: 317 EIKGHQNWVKMSGEHLTFPGGGTQFKNGALHYIDFI 352





Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 1EC: .EC: 1EC: .EC: -
>sp|Q6NPR7|PMTO_ARATH Probable methyltransferase PMT24 OS=Arabidopsis thaliana GN=At1g29470 PE=1 SV=1 Back     alignment and function description
>sp|Q8L7V3|PMTQ_ARATH Probable methyltransferase PMT26 OS=Arabidopsis thaliana GN=At5g64030 PE=1 SV=1 Back     alignment and function description
>sp|Q9SD39|PMTR_ARATH Probable methyltransferase PMT27 OS=Arabidopsis thaliana GN=At3g51070 PE=3 SV=1 Back     alignment and function description
>sp|Q9LYN3|PMTM_ARATH Probable methyltransferase PMT22 OS=Arabidopsis thaliana GN=At3g56080 PE=3 SV=1 Back     alignment and function description
>sp|Q9SIZ3|PMTN_ARATH Probable methyltransferase PMT23 OS=Arabidopsis thaliana GN=At2g40280 PE=1 SV=2 Back     alignment and function description
>sp|Q94KE1|PMTA_ARATH Probable methyltransferase PMT10 OS=Arabidopsis thaliana GN=At1g77260 PE=2 SV=1 Back     alignment and function description
>sp|O22285|PMTB_ARATH Probable methyltransferase PMT11 OS=Arabidopsis thaliana GN=At2g39750 PE=2 SV=1 Back     alignment and function description
>sp|Q9FG39|PMTC_ARATH Probable methyltransferase PMT12 OS=Arabidopsis thaliana GN=At5g06050 PE=2 SV=1 Back     alignment and function description
>sp|Q93YV7|PMT3_ARATH Probable methyltransferase PMT3 OS=Arabidopsis thaliana GN=At4g14360 PE=1 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query254
255558498 802 ATP binding protein, putative [Ricinus c 0.944 0.299 0.395 1e-52
118485999 817 unknown [Populus trichocarpa] 0.929 0.288 0.378 1e-47
15226271 770 putative methyltransferase PMT25 [Arabid 0.948 0.312 0.369 1e-41
110743762 770 hypothetical protein [Arabidopsis thalia 0.948 0.312 0.369 2e-41
297826893 773 hypothetical protein ARALYDRAFT_482372 [ 0.948 0.311 0.359 2e-40
356516372 806 PREDICTED: probable methyltransferase PM 0.921 0.290 0.344 2e-37
356508961 810 PREDICTED: probable methyltransferase PM 0.929 0.291 0.331 7e-37
12323540 768 unknown protein; 55790-52851 [Arabidopsi 0.921 0.304 0.346 4e-36
30690755 770 putative methyltransferase PMT24 [Arabid 0.921 0.303 0.346 4e-36
110742309 770 hypothetical protein [Arabidopsis thalia 0.921 0.303 0.346 7e-36
>gi|255558498|ref|XP_002520274.1| ATP binding protein, putative [Ricinus communis] gi|223540493|gb|EEF42060.1| ATP binding protein, putative [Ricinus communis] Back     alignment and taxonomy information
 Score =  212 bits (539), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 146/369 (39%), Positives = 183/369 (49%), Gaps = 129/369 (34%)

Query: 12  FLIVVTVVVFVGLCLVGVWMLMSSSVVP-------------------------------- 39
           +   + VVVFV LCLVGVWMLMSS+V P                                
Sbjct: 17  YFSTIAVVVFVALCLVGVWMLMSSTVAPVQNSNSPSQETVNEVKQTGSENTSKQFEDSSG 76

Query: 40  ----DSTNGDGDDVPVEKSENR----------------VEDNQEEKYMSEGDGEMSESKN 79
               D+T  DG  +   +SEN+                VEDN+EEK  +E   E +ES  
Sbjct: 77  DLPEDATKEDGTAI-YSQSENQSGQDDQNMNIIEKETAVEDNKEEKAETENQDEKTESLE 135

Query: 80  MVNQNQEENIVKESFD-----------ENTESEEES-KAVSENDDGRKREDE-------- 119
              +  E +   ++ D           E TESEE S +  SE D+G K  D+        
Sbjct: 136 EPKKEAENDGDGKTGDGEAEGGETNKSEQTESEEASGENKSEFDEGGKDSDKGENTDENG 195

Query: 120 ---------ESKNQDNDTESRGKDQASTEIFPSGDQSKILKETNAQNGAWSTQPIESQNE 170
                    E  + +N+ ES+ KDQAS E+FP+G QS++L ET+AQNGAWSTQ +ESQNE
Sbjct: 196 QEEKDGKQGEQSSNENNMESQEKDQASVEVFPAGSQSELLNETDAQNGAWSTQAVESQNE 255

Query: 171 TISQQSSIFKDQYGHRWKI---------------W----------------RYCPEEACT 199
             SQQSSI KDQY H WK+               W                R+CPEEA T
Sbjct: 256 KKSQQSSISKDQYAHGWKLCNVTAGPDYIPCLDNWQAIRKLPSTKHYEHRERHCPEEAPT 315

Query: 200 SIAPLPEGYKRSIKWPKSRDRIWYYNFPHTKLSEVK----------------GGETQFEN 243
            + P+PEGY+RSIKWPKSR++IWYYN PHTKL+EVK                GG TQF++
Sbjct: 316 CLVPVPEGYRRSIKWPKSREKIWYYNVPHTKLAEVKGHQNWVKVTGEYLTFPGGGTQFKH 375

Query: 244 GALHYIDFI 252
           GALHYIDFI
Sbjct: 376 GALHYIDFI 384




Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|118485999|gb|ABK94843.1| unknown [Populus trichocarpa] Back     alignment and taxonomy information
>gi|15226271|ref|NP_180977.1| putative methyltransferase PMT25 [Arabidopsis thaliana] gi|79324263|ref|NP_001031477.1| putative methyltransferase PMT25 [Arabidopsis thaliana] gi|292630954|sp|Q0WT31.2|PMTP_ARATH RecName: Full=Probable methyltransferase PMT25 gi|3337361|gb|AAC27406.1| unknown protein [Arabidopsis thaliana] gi|330253856|gb|AEC08950.1| putative methyltransferase PMT25 [Arabidopsis thaliana] gi|330253857|gb|AEC08951.1| putative methyltransferase PMT25 [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|110743762|dbj|BAE99717.1| hypothetical protein [Arabidopsis thaliana] gi|222424409|dbj|BAH20160.1| AT2G34300 [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|297826893|ref|XP_002881329.1| hypothetical protein ARALYDRAFT_482372 [Arabidopsis lyrata subsp. lyrata] gi|297327168|gb|EFH57588.1| hypothetical protein ARALYDRAFT_482372 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|356516372|ref|XP_003526869.1| PREDICTED: probable methyltransferase PMT26-like [Glycine max] Back     alignment and taxonomy information
>gi|356508961|ref|XP_003523221.1| PREDICTED: probable methyltransferase PMT26-like [Glycine max] Back     alignment and taxonomy information
>gi|12323540|gb|AAG51752.1|AC068667_31 unknown protein; 55790-52851 [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|30690755|ref|NP_174240.2| putative methyltransferase PMT24 [Arabidopsis thaliana] gi|79318852|ref|NP_001031109.1| putative methyltransferase PMT24 [Arabidopsis thaliana] gi|75223284|sp|Q6NPR7.1|PMTO_ARATH RecName: Full=Probable methyltransferase PMT24 gi|38564284|gb|AAR23721.1| At1g29470 [Arabidopsis thaliana] gi|332192972|gb|AEE31093.1| putative methyltransferase PMT24 [Arabidopsis thaliana] gi|332192973|gb|AEE31094.1| putative methyltransferase PMT24 [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|110742309|dbj|BAE99079.1| hypothetical protein [Arabidopsis thaliana] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query254
TAIR|locus:2040864 770 AT2G34300 [Arabidopsis thalian 0.791 0.261 0.340 2e-21
TAIR|locus:2013628 770 AT1G29470 [Arabidopsis thalian 0.787 0.259 0.334 2.6e-21
TAIR|locus:2080823 895 AT3G51070 [Arabidopsis thalian 0.803 0.227 0.324 9e-21
TAIR|locus:2160806 829 AT5G64030 [Arabidopsis thalian 0.795 0.243 0.296 5.7e-17
TAIR|locus:2063078 589 AT2G40280 [Arabidopsis thalian 0.251 0.108 0.45 1.3e-11
TAIR|locus:2195955 655 AT1G77260 [Arabidopsis thalian 0.188 0.073 0.520 1.2e-10
TAIR|locus:2063947 694 AT2G39750 [Arabidopsis thalian 0.480 0.175 0.315 3.2e-09
TAIR|locus:2153704 682 AT5G06050 [Arabidopsis thalian 0.472 0.175 0.347 1.2e-08
TAIR|locus:2129660 608 AT4G14360 [Arabidopsis thalian 0.228 0.095 0.420 8.4e-07
TAIR|locus:2090935 611 AT3G23300 [Arabidopsis thalian 0.228 0.094 0.420 2e-06
TAIR|locus:2040864 AT2G34300 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 261 (96.9 bits), Expect = 2.0e-21, P = 2.0e-21
 Identities = 82/241 (34%), Positives = 116/241 (48%)

Query:    40 DSTNGDGDDVPVEKSENRVEDNQEEKYMSEGDGEMSESKNMVNQNQEENIVKXXXXXXXX 99
             D  NGDGD    EK +N  E        SE D    + K  + ++ EEN  +        
Sbjct:   124 DDNNGDGDG---EKEKNVKEVG------SESDETTQKEKTQLEESTEENKSEDGNGNEEK 174

Query:   100 XXXXXKAVSENDDGRKREDEESKNQDNDT-ESRGKDQA-STEIFPSGDQSKILKETNAQN 157
                      E+ +   +E   + +Q   T ES   D A ST++  S ++ K  + + +++
Sbjct:   175 AEENASETEESTEKSSKEVFPAGDQAEITKESSTGDGAWSTQLVESQNEKKAQQSSISKD 234

Query:   158 GA---WSTQPIESQNETI---SQQSSIFK----DQYGHRWKIWRYCPEEACTSIAPLPEG 207
              +   W T  + +  + I       +I K      Y HR    R+CPEE+   +  LP+G
Sbjct:   235 QSSYGWKTCNVTAGPDYIPCLDNWQAIKKLHTTMHYEHRE---RHCPEESPHCLVSLPDG 291

Query:   208 YKRSIKWPKSRDRIWYYNFPHTKLSEVKG----------------GETQFENGALHYIDF 251
             YKRSIKWPKSR++IWY N PHTKL+E+KG                G TQF+NGALHYIDF
Sbjct:   292 YKRSIKWPKSREKIWYNNVPHTKLAEIKGHQNWVKMSGEHLTFPGGGTQFKNGALHYIDF 351

Query:   252 I 252
             I
Sbjct:   352 I 352


GO:0005794 "Golgi apparatus" evidence=ISM;IDA
GO:0008168 "methyltransferase activity" evidence=IEA
GO:0009506 "plasmodesma" evidence=IDA
GO:0005768 "endosome" evidence=IDA
GO:0005802 "trans-Golgi network" evidence=IDA
TAIR|locus:2013628 AT1G29470 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2080823 AT3G51070 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2160806 AT5G64030 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2063078 AT2G40280 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2195955 AT1G77260 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2063947 AT2G39750 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2153704 AT5G06050 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2129660 AT4G14360 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2090935 AT3G23300 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Fail to connect to STRING server


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query254
pfam03141 506 pfam03141, Methyltransf_29, Putative S-adenosyl-L- 2e-21
>gnl|CDD|217386 pfam03141, Methyltransf_29, Putative S-adenosyl-L-methionine-dependent methyltransferase Back     alignment and domain information
 Score = 92.4 bits (230), Expect = 2e-21
 Identities = 43/109 (39%), Positives = 55/109 (50%), Gaps = 23/109 (21%)

Query: 164 PIESQNETISQQSSIFKDQYGHRWKIWRYCP--EEACTSIAPLPEGYKRSIKWPKSRDRI 221
           P    +  I    S   ++  HR    R+CP  EE    + P P+GYK  I WPKSRD++
Sbjct: 4   PCLDNDRAIKFLLSR--ERMEHRE---RHCPPSEEKLRCLVPPPDGYKTPIPWPKSRDKV 58

Query: 222 WYYNFPHTKLSEVK----------------GGETQFENGALHYIDFILK 254
           WY N PHTKL+E K                GG TQF +GA  YIDF+ +
Sbjct: 59  WYANVPHTKLAEEKGGQNWVKVEGDKFRFPGGGTQFPHGADAYIDFLAQ 107


This family is a putative S-adenosyl-L-methionine (SAM)-dependent methyltransferase. Length = 506

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 254
PF03141 506 Methyltransf_29: Putative S-adenosyl-L-methionine- 99.95
>PF03141 Methyltransf_29: Putative S-adenosyl-L-methionine-dependent methyltransferase; InterPro: IPR004159 Members of this family of hypothetical plant proteins are putative methyltransferases Back     alignment and domain information
Probab=99.95  E-value=1.3e-29  Score=242.33  Aligned_cols=71  Identities=52%  Similarity=0.866  Sum_probs=65.7

Q ss_pred             ccceeEeccCCC--CCCcccccCCCCCCCCCCCCCccccccccCCCCcccccccc----------------CCCcCcCcH
Q 043708          184 GHRWKIWRYCPE--EACTSIAPLPEGYKRSIKWPKSRDRIWYYNFPHTKLSEVKG----------------GETQFENGA  245 (254)
Q Consensus       184 ~y~WkLcRHCPe--e~~~CLVPpP~GYK~PIrWPkSRDkIWy~NVPHTkLae~KG----------------GGTqF~~GA  245 (254)
                      ...=.++||||.  ++++||||+|+|||+||+||+|||+|||+||||++|+++|+                |||||++||
T Consensus        19 ~~~~~rERhCP~~~~~~~CLVp~P~gYk~P~~WP~SRd~iW~~Nvph~~L~~~K~~qnWv~~~gd~~~FPgggt~F~~Ga   98 (506)
T PF03141_consen   19 ERMEHRERHCPPPEERLRCLVPPPKGYKTPIPWPKSRDYIWYANVPHTKLAEEKADQNWVRVEGDKFRFPGGGTMFPHGA   98 (506)
T ss_pred             ccccEeeccCcCCCCCCccccCCCccCCCCCCCCcccceeeecccCchHHhhhcccccceeecCCEEEeCCCCccccCCH
Confidence            344568999995  89999999999999999999999999999999999999994                999999999


Q ss_pred             HHHHHHhhC
Q 043708          246 LHYIDFILK  254 (254)
Q Consensus       246 ~~YID~IaE  254 (254)
                      ++|||+|++
T Consensus        99 ~~Yid~i~~  107 (506)
T PF03141_consen   99 DHYIDQIAE  107 (506)
T ss_pred             HHHHHHHHH
Confidence            999999974



; GO: 0008168 methyltransferase activity


Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

No hit with e-value below 0.005

Structure Templates Detected by HHsearch ?

No hit with probability above 80.00


Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

No hit with probability above 80.00