Citrus Sinensis ID: 043730

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480
MASTACRNGIVQKGNSKSSSFKSRPHPSPSLGSAIRRSSSASYAGNDGVPGRVRVAVRLRPRNAEETVADADFADCVELQTELKRLKLRKNNWDSDTYEFDEVFTESASQKRVYEVVAKPVVESVLDGYNGTVMAYGQTGTGKTFTLGRLGDEDTSSRGIMVRSMEDILADVSLESDSVSVSYLQLYMETIQDLLDPANDNISIVEDPKTGDVSLPGATLVQIRDQQSFTELLRWGEAHRVAANTKLNTESSRSHAILMIHVKRSVVGREEDLSSEINHASHLIKPSKPLVRKSKLVVVDLAGSERIHKSGSEGHMLEEAKSINLSLSALGKCINALAENSAHVPLRDSKLTRLLRDSFGGTARTSLIVTIGPSPRHRGETASTILFGQRAMKVENMLKIKEEFDYKSLSRRLEIQLDKLIVENERQQKAFDDEVERIHLEAQNRISEVERNFADALEKEKLKCQMEYMESVKKLEERCC
cccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEEccccHHHHHHcccccEEEEEccccEEEEEcccccccccccccccccccccHHHHHHHHHHHHHHHHHccccEEEEEEcccccccccccccccccccccccccHHHHHHHHHHHHccccEEEEEEEEEEcccccccccccccccEEEEccccccEEEccccEEEcccHHHHHHHHHHHHHcccccccccccccccccEEEEEEEEEEEccccccccccccccccccccccccEEEEccEEEEccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHccccccccEEEEEEEEcccccccHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
ccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEEEccccHHHHHccccEEEEEEccccEEEEEccccccccEEEEccEEEcccccHHHHHHHHcHHHHHHHHccccEEEEEEccccccHHHHHcEccccccccEcHHHHHHHHHHHHHHcccccEEEEEEEEEEEHHHHHccccccccEEEEccccccEEEccccEEEEccHHHHHHHHHHcccccEEEEccccccccccEEEEEEEEEEEEEccccccccccccccccccccccEEEEEEEEEEEccccccccccccccccccccccccHHHHHHHHHHHHHHcccccccHHHcHHHHHHHHccccccEEEEEEEEccEHHHHHHHHHHHHHHHcccccEccccccccccccccccccHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHccc
mastacrngivqkgnsksssfksrphpspslgsairrsssasyagndgvpgRVRVAVRlrprnaeetvadadfADCVELQTELKRLKLRknnwdsdtyefdevftesasqkRVYEVVAKPVVESVLDGYNGTvmaygqtgtgktftlgrlgdedtssrgimVRSMEDILADVSLESDSVSVSYLQLYMETIQDLldpandnisivedpktgdvslpgatlvqIRDQQSFTELLRWGEAHRVAANtklntessrsHAILMIHVKRSVVGREEDLSSEinhashlikpskplvrksKLVVVDLAGserihksgseghmlEEAKSINLSLSALGKCINALaensahvplrdskLTRLLRdsfggtartslivtigpsprhrgetastiLFGQRAMKVENMLKIKEEFDYKSLSRRLEIQLDKLIVENERQQKAFDDEVERIHLEAQNRISEVERNFADALEKEKLKCQMEYMESVKKLEERCC
mastacrngivqkgnsksssfksrphpspslgsaIRRSSsasyagndgvpgrVRVAVRLRprnaeetvadadfadcVELQTELkrlklrknnwdsdtYEFDEvftesasqkrvyEVVAKPVVESVLDGYNGTVMaygqtgtgktftlgrlgdedtssrgIMVRSMEDILADVSLESDSVSVSYLQLYMETIQDLLDPANDNISIVEDPKTGDVSLPGATLVQIRDQQSFTELLRWGEAHRVAANtklntessrshailMIHVKRSVVGREEDLSSEINhashlikpskplvrkSKLVVVDLAgserihksgseghmleEAKSINLSLSALGKCINALAEnsahvplrdskLTRLLRdsfggtartslivtigpsprhrgetastilfgqraMKVENMLKIKEEFDYKSLSRRLEIQLDKLIVENERqqkafddevERIHLEaqnriseveRNFADALEKEKLKCQMEYMESVkkleercc
MASTACRNGIVQKGNSKSSSFKSRPHPspslgsairrsssasYAGNDGVPGRVRVAVRLRPRNAEETVADADFADCVELQTELKRLKLRKNNWDSDTYEFDEVFTESASQKRVYEVVAKPVVESVLDGYNGTVMAYGQTGTGKTFTLGRLGDEDTSSRGIMVRSMEDILAdvslesdsvsvsYLQLYMETIQDLLDPANDNISIVEDPKTGDVSLPGATLVQIRDQQSFTELLRWGEAHRVAANTKLNTESSRSHAILMIHVKRSVVGREEDLSSEINHASHLIKPSKPLVRKSKLVVVDLAGSERIHKSGSEGHMLEEAKSINLSLSALGKCINALAENSAHVPLRDSKLTRLLRDSFGGTARTSLIVTIGPSPRHRGETASTILFGQRAMKVENMLKIKEEFDYKSLSRRLEIQLDKLIVENERQQKAFDDEVERIHLEAQNRISEVERNFADALEKEKLKCQMEYMESVKKLEERCC
****************************************************VRVAVRL******ETVADADFADCVELQTELKRLKLRKNNWDSDTYEFDEVFTESASQKRVYEVVAKPVVESVLDGYNGTVMAYGQTGTGKTFTLGRLG*******GIMVRSMEDILADVSLESDSVSVSYLQLYMETIQDLLDPANDNISIVEDPKTGDVSLPGATLVQIRDQQSFTELLRWGEAHRVAANTKL*******HAILMIHVKRSVV**************************SKLVVVDLA********************INLSLSALGKCINALAENSAHVPLRDSKLTRLLRDSFGGTARTSLIVTIG********TASTILFGQRAMKVENMLKIKEEFDYKSLSRRLEIQLDKLIVE*********************************************************
******************************************************VAVRLRPRNAE**********CVELQT************DSDTYEFDEVFTESASQKRVYEVVAKPVVESVLDGYNGTVMAYGQTGTGKTFTLGRLGDEDTSSRGIMVRSMEDILADVSLESDSVSVSYLQLYMETIQDLLDPANDNISIVEDPKTGDVSLPGATLVQIRDQQSFTELLRWGEAHRVAANTKLNTESSRSHAILMIHVKRS********************PSKPLVRKSKLVVVDLAGSERIHKSGSEGHMLEEAKSINLSLSALGKCINALAENSAHVPLRDSKLTRLLRDSFGGTARTSLIVTIGPSPRHRGETASTILFGQRAMKVENMLKIKEEFDYKSLSRRLEIQLD*******************************************************KLEERCC
*******************************************AGNDGVPGRVRVAVRLRPRNAEETVADADFADCVELQTELKRLKLRKNNWDSDTYEFDEVFTESASQKRVYEVVAKPVVESVLDGYNGTVMAYGQTGTGKTFTLGRLGDEDTSSRGIMVRSMEDILADVSLESDSVSVSYLQLYMETIQDLLDPANDNISIVEDPKTGDVSLPGATLVQIRDQQSFTELLRWGEAHRVAANTKLNTESSRSHAILMIHVKRSVVGREEDLSSEINHASHLIKPSKPLVRKSKLVVVDLAGSERIHKSGSEGHMLEEAKSINLSLSALGKCINALAENSAHVPLRDSKLTRLLRDSFGGTARTSLIVTIGPSPRHRGETASTILFGQRAMKVENMLKIKEEFDYKSLSRRLEIQLDKLIVENERQQKAFDDEVERIHLEAQNRISEVERNFADALEKEKLKCQMEYMES*********
**************************************************GRVRVAVRLRPRNAEETVADADFADCVELQTELKRLKLRKNNWDSDTYEFDEVFTESASQKRVYEVVAKPVVESVLDGYNGTVMAYGQTGTGKTFTLGRLGDEDTSSRGIMVRSMEDILADVSLESDSVSVSYLQLYMETIQDLLDPANDNISIVEDPKTGDVSLPGATLVQIRDQQSFTELLRWGEAHRVAANTKLNTESSRSHAILMIHVKRSVVGR******************KPLVRKSKLVVVDLAG*****************KSINLSLSALGKCINALAENSAHVPLRDSKLTRLLRDSFGGTARTSLIVTIGPSPRHRGETASTILFGQRAMKVENMLKIKEEFDYKSLSRRLEIQLDKLIVENERQQKAFDDEVERIHLEAQNRISEVERNFADALEKEKLKCQMEYMESVKKLE*RCC
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MASTACRNGIVQKGNSKSSSFKSRPHPSPSLGSAIRRSSSASYAGNDGVPGRVRVAVRLRPRNAEETVADADFADxxxxxxxxxxxxxxxxxxxxxTYEFDEVFTESASQKRVYEVVAKPVVESVLDGYNGTVMAYGQTGTGKTFTLGRLGDEDTSSRGIMVRSMEDILADVSLESDSVSVSYLQLYMETIQDLLDPANDNISIVEDPKTGDVSLPGATLVQIRDQQSFTELLRWGEAHRVAANTKLNTESSRSHAILMIHVKRSVVGREEDLSSEINHASHLIKPSKPLVRKSKLVVVDLAGSERIHKSGSEGHMLEEAKSINLSLSALGKCINALAENSAHVPLRDSKLTRLLRDSFGGTARTSLIVTIGPSPRHRGETASTILFGQRAMKVENMLKIKEEFDYKSLxxxxxxxxxxxxxxxxxxxxxFDDEVERIxxxxxxxxxxxxxxxxxxxxxEKLKCQMEYMESVKKLEERCC
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query480 2.2.26 [Sep-21-2011]
Q9LPC6 894 Armadillo repeat-containi yes no 0.989 0.531 0.807 0.0
Q9FZ06 919 Armadillo repeat-containi no no 0.991 0.517 0.735 0.0
Q5VQ09 891 Armadillo repeat-containi yes no 0.968 0.521 0.726 0.0
Q9SV36 1051 Armadillo repeat-containi no no 0.906 0.413 0.613 1e-151
Q0DV28 945 Armadillo repeat-containi no no 0.839 0.426 0.659 1e-145
O43093 935 Kinesin heavy chain OS=Sy N/A no 0.675 0.346 0.398 3e-63
Q8T135 990 Kinesin-related protein 5 yes no 0.672 0.326 0.393 2e-62
Q86ZC1 880 Kinesin heavy chain OS=Bo N/A no 0.695 0.379 0.381 3e-62
Q54UC9 1193 Kinesin-related protein 3 no no 0.677 0.272 0.393 5e-62
Q54TL0 1255 Kinesin-related protein 7 no no 0.812 0.310 0.360 6e-62
>sp|Q9LPC6|ARK2_ARATH Armadillo repeat-containing kinesin-like protein 2 OS=Arabidopsis thaliana GN=ARK2 PE=1 SV=2 Back     alignment and function desciption
 Score =  802 bits (2071), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 395/489 (80%), Positives = 439/489 (89%), Gaps = 14/489 (2%)

Query: 1   MASTACRNGIVQ----------KGNSKSSSFKSRPHPSPSLGSAIRRSSSASY-AGNDGV 49
           MA  + RNG V+            N +SSSFKSR    PS   A RRSSSAS  A ++GV
Sbjct: 1   MAMASSRNGAVRGSMRPVSGANSSNLRSSSFKSRI---PSSAPAPRRSSSASIGAADNGV 57

Query: 50  PGRVRVAVRLRPRNAEETVADADFADCVELQTELKRLKLRKNNWDSDTYEFDEVFTESAS 109
           PGRVRVAVRLRPRNA+E+VADADFADCVELQ ELKRLKLRKNNWD++TYEFDEV TE+AS
Sbjct: 58  PGRVRVAVRLRPRNADESVADADFADCVELQPELKRLKLRKNNWDTETYEFDEVLTEAAS 117

Query: 110 QKRVYEVVAKPVVESVLDGYNGTVMAYGQTGTGKTFTLGRLGDEDTSSRGIMVRSMEDIL 169
           QKRVYEVVAKPVVESVL+GYNGTVMAYGQTGTGKTFTLGRLGDEDT++RGIMVRSMEDI+
Sbjct: 118 QKRVYEVVAKPVVESVLEGYNGTVMAYGQTGTGKTFTLGRLGDEDTAARGIMVRSMEDII 177

Query: 170 ADVSLESDSVSVSYLQLYMETIQDLLDPANDNISIVEDPKTGDVSLPGATLVQIRDQQSF 229
              SL++DS+SVSYLQLYMETIQDLLDP NDNI+IVEDP+TGDVSLPGAT V+IR+QQ+F
Sbjct: 178 GGTSLDTDSISVSYLQLYMETIQDLLDPTNDNIAIVEDPRTGDVSLPGATHVEIRNQQNF 237

Query: 230 TELLRWGEAHRVAANTKLNTESSRSHAILMIHVKRSVVGREEDLSSEINHASHLIKPSKP 289
            ELL+ GE HRVAANTKLNTESSRSHAILM+HVKRSVV  E  +S+E+  +SH ++PSKP
Sbjct: 238 LELLQLGETHRVAANTKLNTESSRSHAILMVHVKRSVVENEFPVSNEMESSSHFVRPSKP 297

Query: 290 LVRKSKLVVVDLAGSERIHKSGSEGHMLEEAKSINLSLSALGKCINALAENSAHVPLRDS 349
           LVR+SKLV+VDLAGSER+HKSGSEGHMLEEAKSINLSLSALGKCINA+AENS HVPLRDS
Sbjct: 298 LVRRSKLVLVDLAGSERVHKSGSEGHMLEEAKSINLSLSALGKCINAIAENSPHVPLRDS 357

Query: 350 KLTRLLRDSFGGTARTSLIVTIGPSPRHRGETASTILFGQRAMKVENMLKIKEEFDYKSL 409
           KLTRLLRDSFGGTARTSLIVTIGPSPRHRGET STILFGQRAMKVENMLKIKEEFDYKSL
Sbjct: 358 KLTRLLRDSFGGTARTSLIVTIGPSPRHRGETTSTILFGQRAMKVENMLKIKEEFDYKSL 417

Query: 410 SRRLEIQLDKLIVENERQQKAFDDEVERIHLEAQNRISEVERNFADALEKEKLKCQMEYM 469
           S++LE+QLDK+I ENERQ KAFDD+VERI+ +AQNRISEVE+NFA+ALEKEKLKCQMEYM
Sbjct: 418 SKKLEVQLDKVIAENERQLKAFDDDVERINRQAQNRISEVEKNFAEALEKEKLKCQMEYM 477

Query: 470 ESVKKLEER 478
           ESVKKLEE+
Sbjct: 478 ESVKKLEEK 486
Involved in the control of epidermal-cell morphogenesis in roots and helical growth of roots by promoting microtubule depolymerization and limiting the accumulation of endoplasmic microtubules. Seems to be involved in the control of cell-file rotation (or twisting).
Arabidopsis thaliana (taxid: 3702)
>sp|Q9FZ06|ARK3_ARATH Armadillo repeat-containing kinesin-like protein 3 OS=Arabidopsis thaliana GN=ARK3 PE=1 SV=1 Back     alignment and function description
>sp|Q5VQ09|ARK2_ORYSJ Armadillo repeat-containing kinesin-like protein 2 OS=Oryza sativa subsp. japonica GN=Os06g0137100 PE=2 SV=1 Back     alignment and function description
>sp|Q9SV36|ARK1_ARATH Armadillo repeat-containing kinesin-like protein 1 OS=Arabidopsis thaliana GN=ARK1 PE=1 SV=2 Back     alignment and function description
>sp|Q0DV28|ARK1_ORYSJ Armadillo repeat-containing kinesin-like protein 1 OS=Oryza sativa subsp. japonica GN=Os03g0152900 PE=2 SV=2 Back     alignment and function description
>sp|O43093|KINH_SYNRA Kinesin heavy chain OS=Syncephalastrum racemosum PE=2 SV=1 Back     alignment and function description
>sp|Q8T135|KIF5_DICDI Kinesin-related protein 5 OS=Dictyostelium discoideum GN=kif5 PE=1 SV=1 Back     alignment and function description
>sp|Q86ZC1|KINH_BOTFU Kinesin heavy chain OS=Botryotinia fuckeliana GN=klp1 PE=3 SV=1 Back     alignment and function description
>sp|Q54UC9|KIF3_DICDI Kinesin-related protein 3 OS=Dictyostelium discoideum GN=kif3 PE=1 SV=1 Back     alignment and function description
>sp|Q54TL0|KIF7_DICDI Kinesin-related protein 7 OS=Dictyostelium discoideum GN=kif7 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query480
255541342 896 Kinesin-II 85 kDa subunit, putative [Ric 0.987 0.529 0.833 0.0
359489421 895 PREDICTED: armadillo repeat-containing k 0.993 0.532 0.834 0.0
224130014 905 predicted protein [Populus trichocarpa] 0.966 0.512 0.845 0.0
147867330 960 hypothetical protein VITISV_029907 [Viti 0.993 0.496 0.834 0.0
238478319 915 armadillo repeat-containing kinesin-like 0.989 0.519 0.807 0.0
224067773 907 predicted protein [Populus trichocarpa] 0.966 0.511 0.836 0.0
8570446 885 Contains similarity to a kinesin homolog 0.989 0.536 0.807 0.0
238478317 877 armadillo repeat-containing kinesin-like 0.989 0.541 0.807 0.0
30678214 894 armadillo repeat-containing kinesin-like 0.989 0.531 0.807 0.0
297848308 893 armadillo/beta-catenin repeat family pro 0.985 0.529 0.797 0.0
>gi|255541342|ref|XP_002511735.1| Kinesin-II 85 kDa subunit, putative [Ricinus communis] gi|223548915|gb|EEF50404.1| Kinesin-II 85 kDa subunit, putative [Ricinus communis] Back     alignment and taxonomy information
 Score =  826 bits (2133), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 406/487 (83%), Positives = 445/487 (91%), Gaps = 13/487 (2%)

Query: 1   MASTACRNGIVQKG------NSKSSSFKSRPHPSPSLGSAIRRSSSASY---AGNDGVPG 51
           MAS+A RNG  +        N KSSSFKSR     S GS IRRS+ AS+   AG+DGVPG
Sbjct: 1   MASSAYRNGTAKGAPKPLSSNLKSSSFKSRH----SQGSVIRRSTPASFSPNAGDDGVPG 56

Query: 52  RVRVAVRLRPRNAEETVADADFADCVELQTELKRLKLRKNNWDSDTYEFDEVFTESASQK 111
           RVRVAVRLRPRNAEE +ADADFADCVELQ ELKRLKLRKNNWD+DTYEFDEV TE ASQK
Sbjct: 57  RVRVAVRLRPRNAEELMADADFADCVELQPELKRLKLRKNNWDADTYEFDEVLTEFASQK 116

Query: 112 RVYEVVAKPVVESVLDGYNGTVMAYGQTGTGKTFTLGRLGDEDTSSRGIMVRSMEDILAD 171
           RVYEVVAKPVVESVLDGYNGTVMAYGQTGTGKTFT+G LG  DTS+RGIMVR+MEDILAD
Sbjct: 117 RVYEVVAKPVVESVLDGYNGTVMAYGQTGTGKTFTVGHLGGNDTSARGIMVRAMEDILAD 176

Query: 172 VSLESDSVSVSYLQLYMETIQDLLDPANDNISIVEDPKTGDVSLPGATLVQIRDQQSFTE 231
           VSL++DSVS+SYLQLYMETIQDLLDP NDNI+I+EDPKTGDVSLPGATLV+IRDQQ+F E
Sbjct: 177 VSLDTDSVSLSYLQLYMETIQDLLDPVNDNITILEDPKTGDVSLPGATLVEIRDQQNFVE 236

Query: 232 LLRWGEAHRVAANTKLNTESSRSHAILMIHVKRSVVGREEDLSSEINHASHLIKPSKPLV 291
           LLR GEAHRVAANTKLNTESSRSHAILM+HVKRSV GRE+ L + I+ +SHL+KP +PLV
Sbjct: 237 LLRLGEAHRVAANTKLNTESSRSHAILMVHVKRSVAGREDALLNGIDDSSHLVKPVRPLV 296

Query: 292 RKSKLVVVDLAGSERIHKSGSEGHMLEEAKSINLSLSALGKCINALAENSAHVPLRDSKL 351
           RKSKLV+VDLAGSER+HKSGSEGHMLEEAKSINLSLSALGKCINALAENSAHVP+RDSKL
Sbjct: 297 RKSKLVLVDLAGSERVHKSGSEGHMLEEAKSINLSLSALGKCINALAENSAHVPVRDSKL 356

Query: 352 TRLLRDSFGGTARTSLIVTIGPSPRHRGETASTILFGQRAMKVENMLKIKEEFDYKSLSR 411
           TRLL+DSFGGTARTSLIVTIGPSPRHRGET STILFGQRAMKVENMLKIKEEFDYKSLSR
Sbjct: 357 TRLLKDSFGGTARTSLIVTIGPSPRHRGETTSTILFGQRAMKVENMLKIKEEFDYKSLSR 416

Query: 412 RLEIQLDKLIVENERQQKAFDDEVERIHLEAQNRISEVERNFADALEKEKLKCQMEYMES 471
           +LEIQ+DKLI ENERQQKAFDDE+E+I+ EA+NRI+EVER+FA+ALEKE+LKCQMEYMES
Sbjct: 417 KLEIQVDKLIAENERQQKAFDDEIEKINQEAENRIAEVERSFAEALEKERLKCQMEYMES 476

Query: 472 VKKLEER 478
           VKKLEE+
Sbjct: 477 VKKLEEK 483

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|359489421|ref|XP_002273752.2| PREDICTED: armadillo repeat-containing kinesin-like protein 2-like [Vitis vinifera] gi|296089163|emb|CBI38866.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|224130014|ref|XP_002320731.1| predicted protein [Populus trichocarpa] gi|222861504|gb|EEE99046.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|147867330|emb|CAN81188.1| hypothetical protein VITISV_029907 [Vitis vinifera] Back     alignment and taxonomy information
>gi|238478319|ref|NP_001154301.1| armadillo repeat-containing kinesin-like protein 2 [Arabidopsis thaliana] gi|332189238|gb|AEE27359.1| armadillo repeat-containing kinesin-like protein 2 [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|224067773|ref|XP_002302540.1| predicted protein [Populus trichocarpa] gi|222844266|gb|EEE81813.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|8570446|gb|AAF76473.1|AC020622_7 Contains similarity to a kinesin homolog from Arabidopsis thaliana gb|T06733 and contains a Kinesin motor PF|00225 domain and multiple Armadillo/beta-catenin-like PF|00514 repeats [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|238478317|ref|NP_001154300.1| armadillo repeat-containing kinesin-like protein 2 [Arabidopsis thaliana] gi|332189237|gb|AEE27358.1| armadillo repeat-containing kinesin-like protein 2 [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|30678214|ref|NP_171697.3| armadillo repeat-containing kinesin-like protein 2 [Arabidopsis thaliana] gi|193806751|sp|Q9LPC6.2|ARK2_ARATH RecName: Full=Armadillo repeat-containing kinesin-like protein 2 gi|162958325|dbj|BAF95586.1| armadillo repeat kinesin2 [Arabidopsis thaliana] gi|332189236|gb|AEE27357.1| armadillo repeat-containing kinesin-like protein 2 [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|297848308|ref|XP_002892035.1| armadillo/beta-catenin repeat family protein [Arabidopsis lyrata subsp. lyrata] gi|297337877|gb|EFH68294.1| armadillo/beta-catenin repeat family protein [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query480
TAIR|locus:2025497 915 ARK2 "armadillo repeat kinesin 0.991 0.520 0.778 1e-194
UNIPROTKB|O15066 747 KIF3B "Kinesin-like protein KI 0.743 0.477 0.371 5.4e-57
UNIPROTKB|F1N020 743 KIF3B "Uncharacterized protein 0.743 0.480 0.371 8.8e-57
UNIPROTKB|E2QUS2 747 KIF3B "Uncharacterized protein 0.743 0.477 0.371 8.8e-57
UNIPROTKB|F1S519 757 KIF3B "Uncharacterized protein 0.741 0.470 0.360 1.1e-56
MGI|MGI:107688 747 Kif3b "kinesin family member 3 0.741 0.476 0.362 3.8e-56
ASPGD|ASPL0000033533 966 kinA [Emericella nidulans (tax 0.710 0.353 0.378 7.3e-56
WB|WBGene00002230 646 klp-20 [Caenorhabditis elegans 0.470 0.349 0.365 1.6e-55
UNIPROTKB|F1NIP3 707 KIF3A "Uncharacterized protein 0.787 0.534 0.344 4.2e-55
UNIPROTKB|P46872 699 KRP85 "Kinesin-II 85 kDa subun 0.766 0.526 0.349 6.9e-55
TAIR|locus:2025497 ARK2 "armadillo repeat kinesin 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1886 (669.0 bits), Expect = 1.0e-194, P = 1.0e-194
 Identities = 380/488 (77%), Positives = 419/488 (85%)

Query:     1 MASTACRNGIVQ----------KGNSKSSSFKSRPHPXXXXXXXXXXXXXXXYAGNDGVP 50
             MA  + RNG V+            N +SSSFKSR  P                A N GVP
Sbjct:     1 MAMASSRNGAVRGSMRPVSGANSSNLRSSSFKSRI-PSSAPAPRRSSSASIGAADN-GVP 58

Query:    51 GRVRVAVRLRPRNAEETVADADFADCVELQTELKRLKLRKNNWDSDTYEFDEVFTESASQ 110
             GRVRVAVRLRPRNA+E+VADADFADCVELQ ELKRLKLRKNNWD++TYEFDEV TE+ASQ
Sbjct:    59 GRVRVAVRLRPRNADESVADADFADCVELQPELKRLKLRKNNWDTETYEFDEVLTEAASQ 118

Query:   111 KRVYEVVAKPVVESVLDGYNGTVMAYGQTGTGKTFTLGRLGDEDTSSRGIMVRSMEDILA 170
             KRVYEVVAKPVVESVL+GYNGTVMAYGQTGTGKTFTLGRLGDEDT++RGIMVRSMEDI+ 
Sbjct:   119 KRVYEVVAKPVVESVLEGYNGTVMAYGQTGTGKTFTLGRLGDEDTAARGIMVRSMEDIIG 178

Query:   171 XXXXXXXXXXXXYLQLYMETIQDLLDPANDNISIVEDPKTGDVSLPGATLVQIRDQQSFT 230
                         YLQLYMETIQDLLDP NDNI+IVEDP+TGDVSLPGAT V+IR+QQ+F 
Sbjct:   179 GTSLDTDSISVSYLQLYMETIQDLLDPTNDNIAIVEDPRTGDVSLPGATHVEIRNQQNFL 238

Query:   231 ELLRWGEAHRVAANTKLNTESSRSHAILMIHVKRSVVGREEDLSSEINHASHLIKPSKPL 290
             ELL+ GE HRVAANTKLNTESSRSHAILM+HVKRSVV  E  +S+E+  +SH ++PSKPL
Sbjct:   239 ELLQLGETHRVAANTKLNTESSRSHAILMVHVKRSVVENEFPVSNEMESSSHFVRPSKPL 298

Query:   291 VRKSKLVVVDLAGSERIHKSGSEGHMLEEAKSINLSLSALGKCINALAENSAHVPLRDSK 350
             VR+SKLV+VDLAGSER+HKSGSEGHMLEEAKSINLSLSALGKCINA+AENS HVPLRDSK
Sbjct:   299 VRRSKLVLVDLAGSERVHKSGSEGHMLEEAKSINLSLSALGKCINAIAENSPHVPLRDSK 358

Query:   351 LTRLLRDSFGGTARTSLIVTIGPSPRHRGETASTILFGQRAMKVENMLKIKEEFDYKSLS 410
             LTRLLRDSFGGTARTSLIVTIGPSPRHRGET STILFGQRAMKVENMLKIKEEFDYKSLS
Sbjct:   359 LTRLLRDSFGGTARTSLIVTIGPSPRHRGETTSTILFGQRAMKVENMLKIKEEFDYKSLS 418

Query:   411 RRLEIQLDKLIVENERQQKAFDDEVERIHLEAQNRISEVERNFADALEKEKLKCQMEYME 470
             ++LE+QLDK+I ENERQ KAFDD+VERI+ +AQNRISEVE+NFA+ALEKEKLKCQMEYME
Sbjct:   419 KKLEVQLDKVIAENERQLKAFDDDVERINRQAQNRISEVEKNFAEALEKEKLKCQMEYME 478

Query:   471 SVKKLEER 478
             SVKKLEE+
Sbjct:   479 SVKKLEEK 486
GO:0003777 "microtubule motor activity" evidence=IEA;ISS
GO:0005524 "ATP binding" evidence=IEA
GO:0007018 "microtubule-based movement" evidence=IEA
GO:0048364 "root development" evidence=IMP
UNIPROTKB|O15066 KIF3B "Kinesin-like protein KIF3B" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|F1N020 KIF3B "Uncharacterized protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|E2QUS2 KIF3B "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|F1S519 KIF3B "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
MGI|MGI:107688 Kif3b "kinesin family member 3B" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
ASPGD|ASPL0000033533 kinA [Emericella nidulans (taxid:162425)] Back     alignment and assigned GO terms
WB|WBGene00002230 klp-20 [Caenorhabditis elegans (taxid:6239)] Back     alignment and assigned GO terms
UNIPROTKB|F1NIP3 KIF3A "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
UNIPROTKB|P46872 KRP85 "Kinesin-II 85 kDa subunit" [Strongylocentrotus purpuratus (taxid:7668)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q5VQ09ARK2_ORYSJNo assigned EC number0.72650.96870.5218yesno
Q9LPC6ARK2_ARATHNo assigned EC number0.80770.98950.5313yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query480
pfam00225326 pfam00225, Kinesin, Kinesin motor domain 1e-123
smart00129335 smart00129, KISc, Kinesin motor, catalytic domain 1e-115
cd00106328 cd00106, KISc, Kinesin motor domain 1e-107
cd01369325 cd01369, KISc_KHC_KIF5, Kinesin motor domain, kine 1e-106
cd01366329 cd01366, KISc_C_terminal, Kinesin motor domain, KI 3e-89
cd01372341 cd01372, KISc_KIF4, Kinesin motor domain, KIF4-lik 7e-86
cd01364352 cd01364, KISc_BimC_Eg5, Kinesin motor domain, BimC 9e-86
cd01370338 cd01370, KISc_KIP3_like, Kinesin motor domain, KIP 2e-84
cd01374321 cd01374, KISc_CENP_E, Kinesin motor domain, CENP-E 5e-83
cd01371333 cd01371, KISc_KIF3, Kinesin motor domain, kinesins 5e-81
cd01375334 cd01375, KISc_KIF9_like, Kinesin motor domain, KIF 2e-79
cd01376319 cd01376, KISc_KID_like, Kinesin motor domain, KIF2 3e-74
cd01373337 cd01373, KISc_KLP2_like, Kinesin motor domain, KLP 8e-72
cd01365356 cd01365, KISc_KIF1A_KIF1B, Kinesin motor domain, K 3e-71
COG5059 568 COG5059, KIP1, Kinesin-like protein [Cytoskeleton] 3e-68
cd01367322 cd01367, KISc_KIF2_like, Kinesin motor domain, KIF 5e-65
cd01368345 cd01368, KISc_KIF23_like, Kinesin motor domain, KI 2e-61
PLN03188 1320 PLN03188, PLN03188, kinesin-12 family protein; Pro 2e-54
cd01363186 cd01363, Motor_domain, Myosin and Kinesin motor do 3e-39
>gnl|CDD|215803 pfam00225, Kinesin, Kinesin motor domain Back     alignment and domain information 
 Score =  361 bits (928), Expect = e-123
 Identities = 149/347 (42%), Positives = 199/347 (57%), Gaps = 31/347 (8%)

Query: 58  RLRPRNAEETVADADFADCVELQT-ELKRLKLRKNNWDSDTYEFDEVFTESASQKRVYEV 116
           R+RP N  E    +     V+    E K   +  N     T+ FD VF   A+Q+ VYE 
Sbjct: 1   RVRPLNEREKSRGSSDIVNVDETDSEDKESVVITNKGREKTFTFDRVFDPEATQEFVYEE 60

Query: 117 VAKPVVESVLDGYNGTVMAYGQTGTGKTFTLGRLGDEDTSSRGIMVRSMEDILADVSLES 176
            AKP+VESVL+GYN T+ AYGQTG+GKT+T+   GD      GI+ R++ED+   +    
Sbjct: 61  TAKPLVESVLEGYNVTIFAYGQTGSGKTYTM--EGDPPEEEPGIIPRALEDLFERIEERK 118

Query: 177 D-----SVSVSYLQLYMETIQDLLDPANDN--ISIVEDPKTGDVSLPGATLVQIRDQQSF 229
           +     SV VSYL++Y E I DLL P++    + I EDPK G V + G T V++   +  
Sbjct: 119 ERKWSFSVRVSYLEIYNEKIYDLLSPSSKKKKLRIREDPKKG-VYVKGLTEVEVTSAEEV 177

Query: 230 TELLRWGEAHRVAANTKLNTESSRSHAILMIHVKRSVVGREEDLSSEINHASHLIKPSKP 289
            ELL  G  +R  A+T +N ESSRSHAI  I V++                    + +  
Sbjct: 178 LELLELGNKNRTVASTNMNEESSRSHAIFTITVEQR------------------NRDTDG 219

Query: 290 LVRKSKLVVVDLAGSERIHKSG-SEGHMLEEAKSINLSLSALGKCINALAEN-SAHVPLR 347
            V+  KL +VDLAGSER  K+G + G  L+EA +IN SLSALG  INALAEN S+H+P R
Sbjct: 220 SVKTGKLNLVDLAGSERASKTGAAGGRRLKEAANINKSLSALGNVINALAENQSSHIPYR 279

Query: 348 DSKLTRLLRDSFGGTARTSLIVTIGPSPRHRGETASTILFGQRAMKV 394
           DSKLTRLL+DS GG ++T +I  I PS  +  ET ST+ F  RA  +
Sbjct: 280 DSKLTRLLQDSLGGNSKTLMIANISPSDSNYEETLSTLRFASRAKNI 326

Length = 326
>gnl|CDD|214526 smart00129, KISc, Kinesin motor, catalytic domain Back     alignment and domain information
>gnl|CDD|238054 cd00106, KISc, Kinesin motor domain Back     alignment and domain information
>gnl|CDD|238665 cd01369, KISc_KHC_KIF5, Kinesin motor domain, kinesin heavy chain (KHC) or KIF5-like subgroup Back     alignment and domain information
>gnl|CDD|238662 cd01366, KISc_C_terminal, Kinesin motor domain, KIFC2/KIFC3/ncd-like carboxy-terminal kinesins Back     alignment and domain information
>gnl|CDD|238668 cd01372, KISc_KIF4, Kinesin motor domain, KIF4-like subfamily Back     alignment and domain information
>gnl|CDD|238660 cd01364, KISc_BimC_Eg5, Kinesin motor domain, BimC/Eg5 spindle pole proteins, participate in spindle assembly and chromosome segregation during cell division Back     alignment and domain information
>gnl|CDD|238666 cd01370, KISc_KIP3_like, Kinesin motor domain, KIP3-like subgroup Back     alignment and domain information
>gnl|CDD|238670 cd01374, KISc_CENP_E, Kinesin motor domain, CENP-E/KIP2-like subgroup, involved in chromosome movement and/or spindle elongation during mitosis Back     alignment and domain information
>gnl|CDD|238667 cd01371, KISc_KIF3, Kinesin motor domain, kinesins II or KIF3_like proteins Back     alignment and domain information
>gnl|CDD|238671 cd01375, KISc_KIF9_like, Kinesin motor domain, KIF9-like subgroup; might play a role in cell shape remodeling Back     alignment and domain information
>gnl|CDD|238672 cd01376, KISc_KID_like, Kinesin motor domain, KIF22/Kid-like subgroup Back     alignment and domain information
>gnl|CDD|238669 cd01373, KISc_KLP2_like, Kinesin motor domain, KLP2-like subgroup Back     alignment and domain information
>gnl|CDD|238661 cd01365, KISc_KIF1A_KIF1B, Kinesin motor domain, KIF1_like proteins Back     alignment and domain information
>gnl|CDD|227392 COG5059, KIP1, Kinesin-like protein [Cytoskeleton] Back     alignment and domain information
>gnl|CDD|238663 cd01367, KISc_KIF2_like, Kinesin motor domain, KIF2-like group Back     alignment and domain information
>gnl|CDD|238664 cd01368, KISc_KIF23_like, Kinesin motor domain, KIF23-like subgroup Back     alignment and domain information
>gnl|CDD|215621 PLN03188, PLN03188, kinesin-12 family protein; Provisional Back     alignment and domain information
>gnl|CDD|238659 cd01363, Motor_domain, Myosin and Kinesin motor domain Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 480
KOG0243 1041 consensus Kinesin-like protein [Cytoskeleton] 100.0
KOG0245 1221 consensus Kinesin-like protein [Cytoskeleton] 100.0
KOG4280 574 consensus Kinesin-like protein [Cytoskeleton] 100.0
KOG0240 607 consensus Kinesin (SMY1 subfamily) [Cytoskeleton] 100.0
PLN03188 1320 kinesin-12 family protein; Provisional 100.0
KOG0242 675 consensus Kinesin-like protein [Cytoskeleton] 100.0
cd01373337 KISc_KLP2_like Kinesin motor domain, KLP2-like sub 100.0
cd01370338 KISc_KIP3_like Kinesin motor domain, KIP3-like sub 100.0
KOG0241 1714 consensus Kinesin-like protein [Cytoskeleton] 100.0
cd01368345 KISc_KIF23_like Kinesin motor domain, KIF23-like s 100.0
cd01365356 KISc_KIF1A_KIF1B Kinesin motor domain, KIF1_like p 100.0
cd01364352 KISc_BimC_Eg5 Kinesin motor domain, BimC/Eg5 spind 100.0
cd01371333 KISc_KIF3 Kinesin motor domain, kinesins II or KIF 100.0
cd01367322 KISc_KIF2_like Kinesin motor domain, KIF2-like gro 100.0
cd01376319 KISc_KID_like Kinesin motor domain, KIF22/Kid-like 100.0
cd01369325 KISc_KHC_KIF5 Kinesin motor domain, kinesin heavy 100.0
cd01372341 KISc_KIF4 Kinesin motor domain, KIF4-like subfamil 100.0
cd01374321 KISc_CENP_E Kinesin motor domain, CENP-E/KIP2-like 100.0
cd01375334 KISc_KIF9_like Kinesin motor domain, KIF9-like sub 100.0
cd01366329 KISc_C_terminal Kinesin motor domain, KIFC2/KIFC3/ 100.0
KOG0239670 consensus Kinesin (KAR3 subfamily) [Cytoskeleton] 100.0
smart00129335 KISc Kinesin motor, catalytic domain. ATPase. Micr 100.0
PF00225335 Kinesin: Kinesin motor domain; InterPro: IPR001752 100.0
cd00106328 KISc Kinesin motor domain. This catalytic (head) d 100.0
KOG0246676 consensus Kinesin-like protein [Cytoskeleton] 100.0
KOG0247 809 consensus Kinesin-like protein [Cytoskeleton] 100.0
KOG0244 913 consensus Kinesin-like protein [Cytoskeleton] 100.0
COG5059 568 KIP1 Kinesin-like protein [Cytoskeleton] 100.0
cd01363186 Motor_domain Myosin and Kinesin motor domain. Thes 100.0
COG5059568 KIP1 Kinesin-like protein [Cytoskeleton] 98.0
COG0556 663 UvrB Helicase subunit of the DNA excision repair c 95.09
COG2804500 PulE Type II secretory pathway, ATPase PulE/Tfp pi 94.37
PF00308219 Bac_DnaA: Bacterial dnaA protein; InterPro: IPR013 94.22
COG2805353 PilT Tfp pilus assembly protein, pilus retraction 94.17
PRK06893229 DNA replication initiation factor; Validated 93.88
PRK06620214 hypothetical protein; Validated 92.05
PRK12377248 putative replication protein; Provisional 91.82
PRK09087226 hypothetical protein; Validated 91.33
PRK14086617 dnaA chromosomal replication initiation protein; P 91.08
PRK06526254 transposase; Provisional 90.84
PRK08084235 DNA replication initiation factor; Provisional 90.77
PRK05642234 DNA replication initiation factor; Validated 90.74
PRK08116268 hypothetical protein; Validated 90.65
PRK07952244 DNA replication protein DnaC; Validated 90.42
PRK14088440 dnaA chromosomal replication initiation protein; P 90.05
TIGR00362405 DnaA chromosomal replication initiator protein Dna 89.7
PRK06835329 DNA replication protein DnaC; Validated 89.44
PF05673249 DUF815: Protein of unknown function (DUF815); Inte 89.41
TIGR02928365 orc1/cdc6 family replication initiation protein. M 89.39
PRK00149450 dnaA chromosomal replication initiation protein; R 89.16
PF04851184 ResIII: Type III restriction enzyme, res subunit; 88.83
PRK00411394 cdc6 cell division control protein 6; Reviewed 88.47
TIGR03420226 DnaA_homol_Hda DnaA regulatory inactivator Hda. Me 88.4
COG1474366 CDC6 Cdc6-related protein, AAA superfamily ATPase 88.2
cd00009151 AAA The AAA+ (ATPases Associated with a wide varie 87.55
PRK08903227 DnaA regulatory inactivator Hda; Validated 87.41
PRK08939306 primosomal protein DnaI; Reviewed 87.41
PRK08181269 transposase; Validated 87.28
PRK08727233 hypothetical protein; Validated 87.15
KOG0239 670 consensus Kinesin (KAR3 subfamily) [Cytoskeleton] 87.06
PRK14087450 dnaA chromosomal replication initiation protein; P 86.94
PF1324576 AAA_19: Part of AAA domain 86.32
COG0593408 DnaA ATPase involved in DNA replication initiation 85.81
COG1484254 DnaC DNA replication protein [DNA replication, rec 85.64
KOG2543438 consensus Origin recognition complex, subunit 5 [R 85.28
cd00046144 DEXDc DEAD-like helicases superfamily. A diverse f 84.78
TIGR02538564 type_IV_pilB type IV-A pilus assembly ATPase PilB. 84.2
PRK10436462 hypothetical protein; Provisional 84.13
COG5008375 PilU Tfp pilus assembly protein, ATPase PilU [Cell 83.79
TIGR02533486 type_II_gspE general secretory pathway protein E. 83.77
KOG0926 1172 consensus DEAH-box RNA helicase [RNA processing an 83.57
PF01935229 DUF87: Domain of unknown function DUF87; InterPro: 83.47
smart00053240 DYNc Dynamin, GTPase. Large GTPases that mediate v 83.14
PTZ001121164 origin recognition complex 1 protein; Provisional 83.09
cd01131198 PilT Pilus retraction ATPase PilT. PilT is a nucle 82.72
PF13401131 AAA_22: AAA domain; PDB: 2QBY_B 1FNN_B 1W5T_A 1W5S 82.66
TIGR02525372 plasmid_TraJ plasmid transfer ATPase TraJ. Members 82.63
TIGR01420343 pilT_fam pilus retraction protein PilT. This model 82.59
PRK06921266 hypothetical protein; Provisional 82.31
PF00270169 DEAD: DEAD/DEAH box helicase; InterPro: IPR011545 82.14
TIGR02524358 dot_icm_DotB Dot/Icm secretion system ATPase DotB. 81.96
PF00437270 T2SE: Type II/IV secretion system protein; InterPr 81.8
smart00382148 AAA ATPases associated with a variety of cellular 81.74
PF13604196 AAA_30: AAA domain; PDB: 1W36_G 3K70_G 3UPU_B 3GPL 81.03
PF12846304 AAA_10: AAA-like domain 80.93
cd01129264 PulE-GspE PulE/GspE The type II secretory pathway 80.82
PF05970364 PIF1: PIF1-like helicase; InterPro: IPR010285 This 80.63
>KOG0243 consensus Kinesin-like protein [Cytoskeleton] Back     alignment and domain information 
Probab=100.00  E-value=9.9e-95  Score=785.41  Aligned_cols=396  Identities=34%  Similarity=0.510  Sum_probs=335.1

Q ss_pred             ecCCCCCCCCCCCCCCCCCCCCcccC--CCCCCCCCCCCCCCCEEEEEEcCCCCccccccCCCCCceEEecccceEEEec
Q 043730           12 QKGNSKSSSFKSRPHPSPSLGSAIRR--SSSASYAGNDGVPGRVRVAVRLRPRNAEETVADADFADCVELQTELKRLKLR   89 (480)
Q Consensus        12 ~~~~~~s~~~~~~~~~~~~~~~~~~~--~s~~~~~~~~~~~~~v~V~vRvRP~~~~e~~~~~~~~~~v~~~~~~~~~~~~   89 (480)
                      .|++..+.+++..|..+|..+...+.  .|+.+.....+...+|+|+|||||++.+|....+  ..+|..+...+.+.++
T Consensus         8 ~r~~~~~~~~~~~p~~~~~~~~~~~~~s~s~~~~k~~~e~~~NIqVivRcRp~n~~E~~~~s--~~VVs~~~~~kEV~v~   85 (1041)
T KOG0243|consen    8 SRSSIVQESPCRTPRETQRSNRDSSGPSNSNTSSKDHKEKEVNIQVIVRCRPRNDRERKSKS--SVVVSCDGIRKEVAVR   85 (1041)
T ss_pred             CcccccccccCCCCCcCCCCccCCCCCCCCCcccCCCCCCCCceEEEEEeCCCCchhhhcCC--CeEEecCCCcceEEEe
Confidence            34444455555555444433332222  1333334455555799999999999999976554  4466666544445544


Q ss_pred             CC---CCCCCceeecccCCCCCChHHHHhhhhhhhHHHhccCCceeEEecCCCCCCccccccc----CCCCCCCCcchhH
Q 043730           90 KN---NWDSDTYEFDEVFTESASQKRVYEVVAKPVVESVLDGYNGTVMAYGQTGTGKTFTLGR----LGDEDTSSRGIMV  162 (480)
Q Consensus        90 ~~---~~~~~~f~FD~Vf~~~~~Q~~vf~~~~~plv~~~l~G~n~ti~aYGqtgSGKTyTm~g----~~~~~~~~~Gii~  162 (480)
                      ..   ..-.++|+||+||+|.++|.+||+.++.|+|+.|+.|||||||||||||+||||||.|    .+.+.+.+.||||
T Consensus        86 ~~~~sk~~~k~ftFDkVFGpes~Q~d~Y~~~v~p~i~eVl~GyNCTIFAYGQTGTGKTyTMeG~~~~~~g~l~~~aGIIP  165 (1041)
T KOG0243|consen   86 QTIASKQIDKTFTFDKVFGPESQQEDLYDQAVSPIIKEVLEGYNCTIFAYGQTGTGKTYTMEGGERKKNGELPSEAGIIP  165 (1041)
T ss_pred             cccccccccceeecceeeCcchhHHHHHHHHHHHHHHHHhccCCceEEEecCCCCCceeeeecCcccccCCCCccCCcch
Confidence            43   2246789999999999999999999999999999999999999999999999999977    2345667889999


Q ss_pred             HHHHHHHhhcCCC--CccEEEEEEeEeechhcccCCCCCC---cceeeecC----CCCceecCCCeEEEecCHHHHHHHH
Q 043730          163 RSMEDILADVSLE--SDSVSVSYLQLYMETIQDLLDPAND---NISIVEDP----KTGDVSLPGATLVQIRDQQSFTELL  233 (480)
Q Consensus       163 r~~~~lf~~~~~~--~~~V~vS~~EIynE~v~DLL~~~~~---~l~i~e~~----~~g~~~v~gl~~~~v~s~~e~~~ll  233 (480)
                      |++.+||..+...  .++|+|||+|+|||.|+|||++...   .+.+.+++    ..|+|+|.|+.++.|.++.|++.+|
T Consensus       166 Ral~~IFd~Le~~~~EYsvKVSfLELYNEEl~DLLa~~~~~~~~~~~k~~~~~~~~kggV~vkGlEEi~V~~A~ei~klL  245 (1041)
T KOG0243|consen  166 RALRQIFDTLEAQGAEYSVKVSFLELYNEELTDLLASEDTSDKKLRIKDDSTIVDGKGGVIVKGLEEIIVTNADEIYKLL  245 (1041)
T ss_pred             HHHHHHHHHHHhcCCeEEEEEEehhhhhHHHHHhcCCccccccccccccCCcccCCcCcEEEecceeeeecchhHHHHHH
Confidence            9999999998765  4799999999999999999987643   35555555    6778999999999999999999999


Q ss_pred             HHHhhcccccccCCCCCCCCceeEEEEEEEEeeccCcccccccccccccccCCCCCceeeeeEEEEeCCCCcccccCCCc
Q 043730          234 RWGEAHRVAANTKLNTESSRSHAILMIHVKRSVVGREEDLSSEINHASHLIKPSKPLVRKSKLVVVDLAGSERIHKSGSE  313 (480)
Q Consensus       234 ~~g~~~R~~~~t~~n~~SSRSH~i~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~L~lVDLAGSEr~~~~~~~  313 (480)
                      .+|.+.|.+|+|.||..|||||+||+|+|.......                .+...++.|||+||||||||.+.++|+.
T Consensus       246 ekGs~kRrtAaTl~N~~SSRSHsIFsItvhike~t~----------------~geelvK~GKLNLVDLAGSENI~RSGA~  309 (1041)
T KOG0243|consen  246 EKGSKKRRTAATLMNDQSSRSHSIFSITVHIKENTP----------------EGEELVKIGKLNLVDLAGSENISRSGAR  309 (1041)
T ss_pred             HhhhhHhHHHHHHhhhhccccceEEEEEEEEecCCC----------------cchhhHhhcccceeeccccccccccccc
Confidence            999999999999999999999999999997654322                1335678999999999999999999999


Q ss_pred             cchHHHHHHHhhhHHHHHHHHHHHhhCCCCCCCCCCcccccccccCCCCceeeEEEeeCCCCCChHHhHHHHHHHHHhcc
Q 043730          314 GHMLEEAKSINLSLSALGKCINALAENSAHVPLRDSKLTRLLRDSFGGTARTSLIVTIGPSPRHRGETASTILFGQRAMK  393 (480)
Q Consensus       314 g~~~~E~~~IN~SL~~L~~vI~aL~~~~~~iPyRdSkLT~LL~dsLgGns~t~~I~~isp~~~~~~eTl~TL~fa~ra~~  393 (480)
                      +.|.+|+..||+||++||+||+||.++..|||||+|||||||||||||.+||+|||||||+..+++||++||.||.|||+
T Consensus       310 ~~RArEAG~INqSLLTLGRVInALVe~s~HIPYRESKLTRLLQDSLGGkTKT~iIATiSPa~~~lEETlSTLEYA~RAKn  389 (1041)
T KOG0243|consen  310 NGRAREAGEINQSLLTLGRVINALVEHSGHIPYRESKLTRLLQDSLGGKTKTCIIATISPAKHNLEETLSTLEYAHRAKN  389 (1041)
T ss_pred             cchhHHhhhhhHHHHHHHHHHHHHHccCCCCCchHHHHHHHHHHHhCCCceeEEEEEeCCCcccHHHHHHHHHHHHHhhh
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccccccccccCCHHHHHHHHHHHHHHHHHHHH
Q 043730          394 VENMLKIKEEFDYKSLSRRLEIQLDKLIVENE  425 (480)
Q Consensus       394 I~n~~~~~~~~~~~~~~~~l~~~~~~l~~e~~  425 (480)
                      |+|+|.+|.....+.+++.|-.|+++|+.++.
T Consensus       390 IkNKPevNQkl~K~~llKd~~~EIerLK~dl~  421 (1041)
T KOG0243|consen  390 IKNKPEVNQKLMKKTLLKDLYEEIERLKRDLA  421 (1041)
T ss_pred             ccCCCccchHHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999887753

>KOG0245 consensus Kinesin-like protein [Cytoskeleton] Back     alignment and domain information
>KOG4280 consensus Kinesin-like protein [Cytoskeleton] Back     alignment and domain information
>KOG0240 consensus Kinesin (SMY1 subfamily) [Cytoskeleton] Back     alignment and domain information
>PLN03188 kinesin-12 family protein; Provisional Back     alignment and domain information
>KOG0242 consensus Kinesin-like protein [Cytoskeleton] Back     alignment and domain information
>cd01373 KISc_KLP2_like Kinesin motor domain, KLP2-like subgroup Back     alignment and domain information
>cd01370 KISc_KIP3_like Kinesin motor domain, KIP3-like subgroup Back     alignment and domain information
>KOG0241 consensus Kinesin-like protein [Cytoskeleton] Back     alignment and domain information
>cd01368 KISc_KIF23_like Kinesin motor domain, KIF23-like subgroup Back     alignment and domain information
>cd01365 KISc_KIF1A_KIF1B Kinesin motor domain, KIF1_like proteins Back     alignment and domain information
>cd01364 KISc_BimC_Eg5 Kinesin motor domain, BimC/Eg5 spindle pole proteins, participate in spindle assembly and chromosome segregation during cell division Back     alignment and domain information
>cd01371 KISc_KIF3 Kinesin motor domain, kinesins II or KIF3_like proteins Back     alignment and domain information
>cd01367 KISc_KIF2_like Kinesin motor domain, KIF2-like group Back     alignment and domain information
>cd01376 KISc_KID_like Kinesin motor domain, KIF22/Kid-like subgroup Back     alignment and domain information
>cd01369 KISc_KHC_KIF5 Kinesin motor domain, kinesin heavy chain (KHC) or KIF5-like subgroup Back     alignment and domain information
>cd01372 KISc_KIF4 Kinesin motor domain, KIF4-like subfamily Back     alignment and domain information
>cd01374 KISc_CENP_E Kinesin motor domain, CENP-E/KIP2-like subgroup, involved in chromosome movement and/or spindle elongation during mitosis Back     alignment and domain information
>cd01375 KISc_KIF9_like Kinesin motor domain, KIF9-like subgroup; might play a role in cell shape remodeling Back     alignment and domain information
>cd01366 KISc_C_terminal Kinesin motor domain, KIFC2/KIFC3/ncd-like carboxy-terminal kinesins Back     alignment and domain information
>KOG0239 consensus Kinesin (KAR3 subfamily) [Cytoskeleton] Back     alignment and domain information
>smart00129 KISc Kinesin motor, catalytic domain Back     alignment and domain information
>PF00225 Kinesin: Kinesin motor domain; InterPro: IPR001752 Kinesin [, , ] is a microtubule-associated force-producing protein that may play a role in organelle transport Back     alignment and domain information
>cd00106 KISc Kinesin motor domain Back     alignment and domain information
>KOG0246 consensus Kinesin-like protein [Cytoskeleton] Back     alignment and domain information
>KOG0247 consensus Kinesin-like protein [Cytoskeleton] Back     alignment and domain information
>KOG0244 consensus Kinesin-like protein [Cytoskeleton] Back     alignment and domain information
>COG5059 KIP1 Kinesin-like protein [Cytoskeleton] Back     alignment and domain information
>cd01363 Motor_domain Myosin and Kinesin motor domain Back     alignment and domain information
>COG5059 KIP1 Kinesin-like protein [Cytoskeleton] Back     alignment and domain information
>COG0556 UvrB Helicase subunit of the DNA excision repair complex [DNA replication, recombination, and repair] Back     alignment and domain information
>COG2804 PulE Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB [Cell motility and secretion / Intracellular trafficking and secretion] Back     alignment and domain information
>PF00308 Bac_DnaA: Bacterial dnaA protein; InterPro: IPR013317 This entry represents the central domain of bacterial DnaA proteins [, , ] that play an important role in initiating and regulating chromosomal replication Back     alignment and domain information
>COG2805 PilT Tfp pilus assembly protein, pilus retraction ATPase PilT [Cell motility and secretion / Intracellular trafficking and secretion] Back     alignment and domain information
>PRK06893 DNA replication initiation factor; Validated Back     alignment and domain information
>PRK06620 hypothetical protein; Validated Back     alignment and domain information
>PRK12377 putative replication protein; Provisional Back     alignment and domain information
>PRK09087 hypothetical protein; Validated Back     alignment and domain information
>PRK14086 dnaA chromosomal replication initiation protein; Provisional Back     alignment and domain information
>PRK06526 transposase; Provisional Back     alignment and domain information
>PRK08084 DNA replication initiation factor; Provisional Back     alignment and domain information
>PRK05642 DNA replication initiation factor; Validated Back     alignment and domain information
>PRK08116 hypothetical protein; Validated Back     alignment and domain information
>PRK07952 DNA replication protein DnaC; Validated Back     alignment and domain information
>PRK14088 dnaA chromosomal replication initiation protein; Provisional Back     alignment and domain information
>TIGR00362 DnaA chromosomal replication initiator protein DnaA Back     alignment and domain information
>PRK06835 DNA replication protein DnaC; Validated Back     alignment and domain information
>PF05673 DUF815: Protein of unknown function (DUF815); InterPro: IPR008533 This domain consists of several bacterial proteins of unknown function Back     alignment and domain information
>TIGR02928 orc1/cdc6 family replication initiation protein Back     alignment and domain information
>PRK00149 dnaA chromosomal replication initiation protein; Reviewed Back     alignment and domain information
>PF04851 ResIII: Type III restriction enzyme, res subunit; InterPro: IPR006935 This entry represents a domain found in the N terminus of several proteins, including helicases, the R subunit (HsdR) of type I restriction endonucleases (3 Back     alignment and domain information
>PRK00411 cdc6 cell division control protein 6; Reviewed Back     alignment and domain information
>TIGR03420 DnaA_homol_Hda DnaA regulatory inactivator Hda Back     alignment and domain information
>COG1474 CDC6 Cdc6-related protein, AAA superfamily ATPase [DNA replication, recombination, and repair / Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>cd00009 AAA The AAA+ (ATPases Associated with a wide variety of cellular Activities) superfamily represents an ancient group of ATPases belonging to the ASCE (for additional strand, catalytic E) division of the P-loop NTPase fold Back     alignment and domain information
>PRK08903 DnaA regulatory inactivator Hda; Validated Back     alignment and domain information
>PRK08939 primosomal protein DnaI; Reviewed Back     alignment and domain information
>PRK08181 transposase; Validated Back     alignment and domain information
>PRK08727 hypothetical protein; Validated Back     alignment and domain information
>KOG0239 consensus Kinesin (KAR3 subfamily) [Cytoskeleton] Back     alignment and domain information
>PRK14087 dnaA chromosomal replication initiation protein; Provisional Back     alignment and domain information
>PF13245 AAA_19: Part of AAA domain Back     alignment and domain information
>COG0593 DnaA ATPase involved in DNA replication initiation [DNA replication, recombination, and repair] Back     alignment and domain information
>COG1484 DnaC DNA replication protein [DNA replication, recombination, and repair] Back     alignment and domain information
>KOG2543 consensus Origin recognition complex, subunit 5 [Replication, recombination and repair] Back     alignment and domain information
>cd00046 DEXDc DEAD-like helicases superfamily Back     alignment and domain information
>TIGR02538 type_IV_pilB type IV-A pilus assembly ATPase PilB Back     alignment and domain information
>PRK10436 hypothetical protein; Provisional Back     alignment and domain information
>COG5008 PilU Tfp pilus assembly protein, ATPase PilU [Cell motility and secretion / Intracellular trafficking and secretion] Back     alignment and domain information
>TIGR02533 type_II_gspE general secretory pathway protein E Back     alignment and domain information
>KOG0926 consensus DEAH-box RNA helicase [RNA processing and modification; Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>PF01935 DUF87: Domain of unknown function DUF87; InterPro: IPR002789 The function of this domain is unknown Back     alignment and domain information
>smart00053 DYNc Dynamin, GTPase Back     alignment and domain information
>PTZ00112 origin recognition complex 1 protein; Provisional Back     alignment and domain information
>cd01131 PilT Pilus retraction ATPase PilT Back     alignment and domain information
>PF13401 AAA_22: AAA domain; PDB: 2QBY_B 1FNN_B 1W5T_A 1W5S_B Back     alignment and domain information
>TIGR02525 plasmid_TraJ plasmid transfer ATPase TraJ Back     alignment and domain information
>TIGR01420 pilT_fam pilus retraction protein PilT Back     alignment and domain information
>PRK06921 hypothetical protein; Provisional Back     alignment and domain information
>PF00270 DEAD: DEAD/DEAH box helicase; InterPro: IPR011545 Members of this family include the DEAD and DEAH box helicases Back     alignment and domain information
>TIGR02524 dot_icm_DotB Dot/Icm secretion system ATPase DotB Back     alignment and domain information
>PF00437 T2SE: Type II/IV secretion system protein; InterPro: IPR001482 A number of bacterial proteins, some of which are involved in a general secretion pathway (GSP) for the export of proteins (also called the type II pathway) belong to this group [, ] Back     alignment and domain information
>smart00382 AAA ATPases associated with a variety of cellular activities Back     alignment and domain information
>PF13604 AAA_30: AAA domain; PDB: 1W36_G 3K70_G 3UPU_B 3GPL_A 3E1S_A 3GP8_A Back     alignment and domain information
>PF12846 AAA_10: AAA-like domain Back     alignment and domain information
>cd01129 PulE-GspE PulE/GspE The type II secretory pathway is the main terminal branch of the general secretory pathway (GSP) Back     alignment and domain information
>PF05970 PIF1: PIF1-like helicase; InterPro: IPR010285 This entry represents PIF1 helicase and related proteins Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query480
2y5w_A365 Crystal Structure Of Drosophila Melanogaster Kinesi 1e-60
1goj_A355 Structure Of A Fast Kinesin: Implications For Atpas 1e-59
1mkj_A349 Human Kinesin Motor Domain With Docked Neck Linker 2e-58
4atx_C340 Rigor Kinesin Motor Domain With An Ordered Neck-Lin 3e-58
1bg2_A325 Human Ubiquitous Kinesin Motor Domain Length = 325 2e-57
3b6u_A372 Crystal Structure Of The Motor Domain Of Human Kine 5e-55
2vvg_A350 Crystal Structure Of The G.Intestinalis Kinesin 2 G 2e-49
3bfn_A388 Crystal Structure Of The Motor Domain Of Human Kine 7e-49
3hqd_A369 Human Kinesin Eg5 Motor Domain In Complex With Ampp 1e-48
4a1z_A368 Eg5-1 Length = 368 1e-48
1ii6_A368 Crystal Structure Of The Mitotic Kinesin Eg5 In Com 1e-48
1q0b_A367 Crystal Structure Of The Motor Protein Ksp In Compl 1e-48
4a28_A368 Eg5-2 Length = 368 1e-48
4ap0_A370 The Mitotic Kinesin Eg5 In Complex With Mg-Adp And 1e-48
4aqv_C373 Model Of Human Kinesin-5 Motor Domain (3hqd) And Ma 1e-48
1x88_A359 Human Eg5 Motor Domain Bound To Mg-Adp And Monastro 2e-48
3zcw_A348 Eg5 - New Allosteric Binding Site Length = 348 3e-48
4a14_A344 Human Kif7, A Kinesin Involved In Hedgehog Signalli 4e-47
2xt3_A344 Human Kif7, A Kinesin Involved In Hedgehog Signalli 3e-46
2wbe_C373 Kinesin-5-Tubulin Complex With Amppnp Length = 373 3e-46
3b6v_A395 Crystal Structure Of The Motor Domain Of Human Kine 3e-46
3lre_A355 Crystal Structure Analysis Of Human Kinesin-8 Motor 8e-46
1sdm_A369 Crystal Structure Of Kinesin-Like Calmodulin Bindin 5e-44
3h4s_A386 Structure Of The Complex Of A Mitotic Kinesin With 2e-43
3nwn_A359 Crystal Structure Of The Human Kif9 Motor Domain In 1e-42
2h58_A330 Crystal Structure Of The Kifc3 Motor Domain In Comp 5e-42
1ia0_K394 Kif1a Head-Microtubule Complex Structure In Atp-For 1e-40
3gbj_A354 Crystal Structure Of The Motor Domain Of Kinesin Ki 2e-40
1i6i_A366 Crystal Structure Of The Kif1a Motor Domain Complex 4e-40
1i5s_A367 Crystal Structure Of The Kif1a Motor Domain Complex 4e-40
1vfv_A366 Crystal Structure Of The Kif1a Motor Domain Complex 4e-40
1t5c_A349 Crystal Structure Of The Motor Domain Of Human Kine 6e-37
3t0q_A349 Motor Domain Structure Of The Kar3-Like Kinesin Fro 4e-35
2owm_A443 Motor Domain Of Neurospora Crassa Kinesin-3 (Nckin3 2e-34
4h1g_A715 Structure Of Candida Albicans Kar3 Motor Domain Fus 5e-34
4etp_A403 C-Terminal Motor And Motor Homology Domain Of Kar3v 5e-34
2gry_A420 Crystal Structure Of The Human Kif2 Motor Domain In 5e-33
2heh_A387 Crystal Structure Of The Kif2c Motor Domain (Casp T 9e-33
1v8j_A410 The Crystal Structure Of The Minimal Functional Dom 1e-32
1f9t_A358 Crystal Structures Of Kinesin Mutants Reveal A Sign 1e-32
3kar_A346 The Motor Domain Of Kinesin-Like Protein Kar3, A Sa 1e-32
4gkr_A371 Structure Of The C-Terminal Motor Domain Of Kar3 Fr 4e-32
1f9w_A347 Crystal Structures Of Mutants Reveal A Signalling P 6e-32
1f9u_A347 Crystal Structures Of Mutants Reveal A Signalling P 7e-32
3edl_D331 Kinesin13-Microtubule Ring Complex Length = 331 7e-32
1f9v_A347 Crystal Structures Of Mutants Reveal A Signalling P 9e-32
2ncd_A420 Ncd (Non-Claret Disjunctional) Dimer From D. Melano 2e-31
1cz7_A406 The Crystal Structure Of A Minus-End Directed Micro 2e-31
2rep_A376 Crystal Structure Of The Motor Domain Of Human Kine 4e-31
3l1c_A383 Kinesin-14 Protein Ncd, T436s Mutant Length = 383 6e-31
3pxn_A344 Crystal Structure Of The Drosophila Kinesin Family 6e-31
3u06_A412 Crystal Structure Of The Kinesin-14 Ncdg347d Length 9e-31
1n6m_A409 Rotation Of The StalkNECK AND ONE HEAD IN A NEW CRY 1e-30
3dc4_A344 Crystal Structure Of The Drosophila Kinesin Family 2e-30
2kin_A238 Kinesin (Monomeric) From Rattus Norvegicus Length = 9e-26
1ry6_A360 Crystal Structure Of Internal Kinesin Motor Domain 1e-23
2kin_B100 Kinesin (Monomeric) From Rattus Norvegicus Length = 5e-18
3kin_B117 Kinesin (Dimeric) From Rattus Norvegicus Length = 1 3e-17
>pdb|2Y5W|A Chain A, Crystal Structure Of Drosophila Melanogaster Kinesin-1 Motor Domain Dimer Length = 365 Back     alignment and structure 
Iteration: 1

 Score =  230 bits (586), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 142/382 (37%), Positives = 216/382 (56%), Gaps = 51/382 (13%)
Query: 53  VRVAVRLRPRNAEETVADADFA---------DCVELQTELKRLKLRKNNWDSDTYEFDEV 103
           ++V  R RP N  E  A + F          +C+ +  ++              Y FD+V
Sbjct: 13  IKVVCRFRPLNDSEEKAGSKFVVKFPNNVEENCISIAGKV--------------YLFDKV 58
Query: 104 FTESASQKRVYEVVAKPVVESVLDGYNGTVMAYGQTGTGKTFTL-GRLGDEDTSSRGIMV 162
           F  +ASQ++VY   AK +V  VL GYNGT+ AYGQT +GKT T+ G +GD  +  +GI+ 
Sbjct: 59  FKPNASQEKVYNEAAKSIVTDVLAGYNGTIFAYGQTSSGKTHTMEGVIGD--SVKQGIIP 116
Query: 163 RSMEDIL----AXXXXXXXXXXXXYLQLYMETIQDLLDPANDNISIVEDPKTGDVSLPGA 218
           R + DI     A            Y ++YM+ I+DLLD +  N+S+ ED K     + GA
Sbjct: 117 RIVNDIFNHIYAMEVNLEFHIKVSYYEIYMDKIRDLLDVSKVNLSVHED-KNRVPYVKGA 175
Query: 219 TLVQIRDQQSFTELLRWGEAHRVAANTKLNTESSRSHAILMIHVKRSVVGREEDLSSEIN 278
           T   +   +   E++  G+++R  A T +N  SSRSH++ +I+VK+  +  ++ LS    
Sbjct: 176 TERFVSSPEDVFEVIEEGKSNRHIAVTNMNEHSSRSHSVFLINVKQENLENQKKLSG--- 232
Query: 279 HASHLIKPSKPLVRKSKLVVVDLAGSERIHKSGSEGHMLEEAKSINLSLSALGKCINALA 338
                           KL +VDLAGSE++ K+G+EG +L+EAK+IN SLSALG  I+ALA
Sbjct: 233 ----------------KLYLVDLAGSEKVSKTGAEGTVLDEAKNINKSLSALGNVISALA 276
Query: 339 E-NSAHVPLRDSKLTRLLRDSFGGTARTSLIVTIGPSPRHRGETASTILFGQRAMKVENM 397
           + N  H+P RDSKLTR+L++S GG ART++++   P+  +  ET ST+ FG+RA  V+N+
Sbjct: 277 DGNKTHIPYRDSKLTRILQESLGGNARTTIVICCSPASFNESETKSTLDFGRRAKTVKNV 336
Query: 398 LKIKEEFDYKSLSRRLEIQLDK 419
           + + EE   +   RR E + +K
Sbjct: 337 VCVNEELTAEEWKRRYEKEKEK 358
>pdb|1GOJ|A Chain A, Structure Of A Fast Kinesin: Implications For Atpase Mechanism And Interactions With Microtubules Length = 355 Back     alignment and structure
>pdb|1MKJ|A Chain A, Human Kinesin Motor Domain With Docked Neck Linker Length = 349 Back     alignment and structure
>pdb|4ATX|C Chain C, Rigor Kinesin Motor Domain With An Ordered Neck-Linker, Docked On Tubulin Dimer, Modelled Into The 8a Cryo-Em Map Of Doublecortin-Microtubules Decorated With Kinesin Length = 340 Back     alignment and structure
>pdb|1BG2|A Chain A, Human Ubiquitous Kinesin Motor Domain Length = 325 Back     alignment and structure
>pdb|3B6U|A Chain A, Crystal Structure Of The Motor Domain Of Human Kinesin Family Member 3b In Complex With Adp Length = 372 Back     alignment and structure
>pdb|2VVG|A Chain A, Crystal Structure Of The G.Intestinalis Kinesin 2 Gikin2a Motor Domain Length = 350 Back     alignment and structure
>pdb|3BFN|A Chain A, Crystal Structure Of The Motor Domain Of Human Kinesin Family Member 22 Length = 388 Back     alignment and structure
>pdb|3HQD|A Chain A, Human Kinesin Eg5 Motor Domain In Complex With Amppnp And Mg2+ Length = 369 Back     alignment and structure
>pdb|4A1Z|A Chain A, Eg5-1 Length = 368 Back     alignment and structure
>pdb|1II6|A Chain A, Crystal Structure Of The Mitotic Kinesin Eg5 In Complex With Mg-Adp. Length = 368 Back     alignment and structure
>pdb|1Q0B|A Chain A, Crystal Structure Of The Motor Protein Ksp In Complex With Adp And Monastrol Length = 367 Back     alignment and structure
>pdb|4A28|A Chain A, Eg5-2 Length = 368 Back     alignment and structure
>pdb|4AP0|A Chain A, The Mitotic Kinesin Eg5 In Complex With Mg-Adp And Ispinesib Length = 370 Back     alignment and structure
>pdb|4AQV|C Chain C, Model Of Human Kinesin-5 Motor Domain (3hqd) And Mammalian Tubulin Heterodimer (1jff) Docked Into The 9.7-angstrom Cryo-em Map Of Microtubule-bound Kinesin-5 Motor Domain In The Ampppnp State. Length = 373 Back     alignment and structure
>pdb|1X88|A Chain A, Human Eg5 Motor Domain Bound To Mg-Adp And Monastrol Length = 359 Back     alignment and structure
>pdb|3ZCW|A Chain A, Eg5 - New Allosteric Binding Site Length = 348 Back     alignment and structure
>pdb|4A14|A Chain A, Human Kif7, A Kinesin Involved In Hedgehog Signalling Length = 344 Back     alignment and structure
>pdb|2XT3|A Chain A, Human Kif7, A Kinesin Involved In Hedgehog Signalling Length = 344 Back     alignment and structure
>pdb|2WBE|C Chain C, Kinesin-5-Tubulin Complex With Amppnp Length = 373 Back     alignment and structure
>pdb|3B6V|A Chain A, Crystal Structure Of The Motor Domain Of Human Kinesin Family Member 3c In Complex With Adp Length = 395 Back     alignment and structure
>pdb|3LRE|A Chain A, Crystal Structure Analysis Of Human Kinesin-8 Motor Domain Length = 355 Back     alignment and structure
>pdb|1SDM|A Chain A, Crystal Structure Of Kinesin-Like Calmodulin Binding Protein Length = 369 Back     alignment and structure
>pdb|3H4S|A Chain A, Structure Of The Complex Of A Mitotic Kinesin With Its Calcium Binding Regulator Length = 386 Back     alignment and structure
>pdb|3NWN|A Chain A, Crystal Structure Of The Human Kif9 Motor Domain In Complex With Adp Length = 359 Back     alignment and structure
>pdb|2H58|A Chain A, Crystal Structure Of The Kifc3 Motor Domain In Complex With Adp Length = 330 Back     alignment and structure
>pdb|1IA0|K Chain K, Kif1a Head-Microtubule Complex Structure In Atp-Form Length = 394 Back     alignment and structure
>pdb|3GBJ|A Chain A, Crystal Structure Of The Motor Domain Of Kinesin Kif13b Bound With Adp Length = 354 Back     alignment and structure
>pdb|1I6I|A Chain A, Crystal Structure Of The Kif1a Motor Domain Complexed With Mg-Amppcp Length = 366 Back     alignment and structure
>pdb|1I5S|A Chain A, Crystal Structure Of The Kif1a Motor Domain Complexed With Mg-Adp Length = 367 Back     alignment and structure
>pdb|1VFV|A Chain A, Crystal Structure Of The Kif1a Motor Domain Complexed With Mg-Amppnp Length = 366 Back     alignment and structure
>pdb|1T5C|A Chain A, Crystal Structure Of The Motor Domain Of Human Kinetochore Protein Cenp-E Length = 349 Back     alignment and structure
>pdb|3T0Q|A Chain A, Motor Domain Structure Of The Kar3-Like Kinesin From Ashbya Gossypii Length = 349 Back     alignment and structure
>pdb|2OWM|A Chain A, Motor Domain Of Neurospora Crassa Kinesin-3 (Nckin3) Length = 443 Back     alignment and structure
>pdb|4H1G|A Chain A, Structure Of Candida Albicans Kar3 Motor Domain Fused To Maltose- Binding Protein Length = 715 Back     alignment and structure
>pdb|4ETP|A Chain A, C-Terminal Motor And Motor Homology Domain Of Kar3vik1 Fused To A Synthetic Heterodimeric Coiled Coil Length = 403 Back     alignment and structure
>pdb|2GRY|A Chain A, Crystal Structure Of The Human Kif2 Motor Domain In Complex With Adp Length = 420 Back     alignment and structure
>pdb|2HEH|A Chain A, Crystal Structure Of The Kif2c Motor Domain (Casp Target) Length = 387 Back     alignment and structure
>pdb|1V8J|A Chain A, The Crystal Structure Of The Minimal Functional Domain Of The Microtubule Destabilizer Kif2c Complexed With Mg-adp Length = 410 Back     alignment and structure
>pdb|1F9T|A Chain A, Crystal Structures Of Kinesin Mutants Reveal A Signalling Pathway For Activation Of The Motor Atpase Length = 358 Back     alignment and structure
>pdb|3KAR|A Chain A, The Motor Domain Of Kinesin-Like Protein Kar3, A Saccharomyces Cerevisiae Kinesin-Related Protein Length = 346 Back     alignment and structure
>pdb|4GKR|A Chain A, Structure Of The C-Terminal Motor Domain Of Kar3 From Candida Glabrata Length = 371 Back     alignment and structure
>pdb|1F9W|A Chain A, Crystal Structures Of Mutants Reveal A Signalling Pathway For Activation Of The Kinesin Motor Atpase Length = 347 Back     alignment and structure
>pdb|1F9U|A Chain A, Crystal Structures Of Mutants Reveal A Signalling Pathway For Activation Of The Kinesin Motor Atpase Length = 347 Back     alignment and structure
>pdb|3EDL|D Chain D, Kinesin13-Microtubule Ring Complex Length = 331 Back     alignment and structure
>pdb|1F9V|A Chain A, Crystal Structures Of Mutants Reveal A Signalling Pathway For Activation Of The Kinesin Motor Atpase Length = 347 Back     alignment and structure
>pdb|2NCD|A Chain A, Ncd (Non-Claret Disjunctional) Dimer From D. Melanogaster Length = 420 Back     alignment and structure
>pdb|1CZ7|A Chain A, The Crystal Structure Of A Minus-End Directed Microtubule Motor Protein Ncd Reveals Variable Dimer Conformations Length = 406 Back     alignment and structure
>pdb|2REP|A Chain A, Crystal Structure Of The Motor Domain Of Human Kinesin Family Member C1 Length = 376 Back     alignment and structure
>pdb|3L1C|A Chain A, Kinesin-14 Protein Ncd, T436s Mutant Length = 383 Back     alignment and structure
>pdb|3PXN|A Chain A, Crystal Structure Of The Drosophila Kinesin Family Member Kin10NOD IN Complex With Divalent Manganese And Adp Length = 344 Back     alignment and structure
>pdb|3U06|A Chain A, Crystal Structure Of The Kinesin-14 Ncdg347d Length = 412 Back     alignment and structure
>pdb|1N6M|A Chain A, Rotation Of The StalkNECK AND ONE HEAD IN A NEW CRYSTAL Structure Of The Kinesin Motor Protein, Ncd Length = 409 Back     alignment and structure
>pdb|3DC4|A Chain A, Crystal Structure Of The Drosophila Kinesin Family Member Nod In Complex With Adp Length = 344 Back     alignment and structure
>pdb|2KIN|A Chain A, Kinesin (Monomeric) From Rattus Norvegicus Length = 238 Back     alignment and structure
>pdb|1RY6|A Chain A, Crystal Structure Of Internal Kinesin Motor Domain Length = 360 Back     alignment and structure
>pdb|2KIN|B Chain B, Kinesin (Monomeric) From Rattus Norvegicus Length = 100 Back     alignment and structure
>pdb|3KIN|B Chain B, Kinesin (Dimeric) From Rattus Norvegicus Length = 117 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query480
3bfn_A388 Kinesin-like protein KIF22; limited proteolysis, s 1e-125
2y65_A365 Kinesin, kinesin heavy chain; motor protein; HET: 1e-124
1bg2_A325 Kinesin; motor protein, ATPase, microtubule associ 1e-122
1goj_A355 Kinesin, kinesin heavy chain; motor protein, ATPas 1e-119
3cob_A369 Kinesin heavy chain-like protein; motor, switch II 1e-118
2nr8_A358 Kinesin-like protein KIF9; motor domain, ADP, stru 1e-118
1x88_A359 Kinesin-like protein KIF11; switch II, motor domai 1e-117
4a14_A344 Kinesin, kinesin-like protein KIF7; motor protein, 1e-117
2h58_A330 Kinesin-like protein KIFC3 variant; motor domain, 1e-116
2wbe_C373 Bipolar kinesin KRP-130; EG5, KLP61F, tubulin, mit 1e-115
2vvg_A350 Kinesin-2; motor protein, nucleotide-binding, micr 1e-115
1f9v_A347 Kinesin-like protein KAR3; kinesin-related protein 1e-115
1t5c_A349 CENP-E protein, centromeric protein E; kinesin mot 1e-114
3b6u_A372 Kinesin-like protein KIF3B; structural genomics co 1e-114
4etp_A403 Kinesin-like protein KAR3; kinesin motor protein, 1e-113
1ry6_A360 Internal kinesin; kinesin motor domain, nucleotide 1e-110
2zfi_A366 Kinesin-like protein KIF1A, kinesin heavy chain is 1e-108
3dc4_A344 Kinesin-like protein NOD; catalytic domain, ATPase 1e-108
2rep_A376 Kinesin-like protein KIFC1; structural genomics co 1e-108
3u06_A412 Protein claret segregational; motor domain, stalk 1e-107
3lre_A355 Kinesin-like protein KIF18A; motor protein, nucleo 1e-107
3t0q_A349 AGR253WP; kinesin, alpha and beta proteins, P-loop 1e-106
3gbj_A354 KIF13B protein; kinesin, motor domain, ADP, struct 1e-106
2owm_A443 Nckin3-434, related to kinesin-like protein KIF1C; 1e-104
2heh_A387 KIF2C protein; kinesin, motor domain, ADP, structu 1e-101
1v8k_A410 Kinesin-like protein KIF2C; microtubule destabiliz 1e-100
2kin_B100 Kinesin; motor protein, cytoskeleton; HET: ADP; 2. 7e-35
3kin_B117 Kinesin heavy chain; motor protein, cytoskeleton; 3e-32
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 9e-12
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 1e-07
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 1e-05
3lvg_D190 LCB, clathrin light chain B; SELF assembly, coated 3e-04
>3bfn_A Kinesin-like protein KIF22; limited proteolysis, structural genomics consortium domain, ADP, SGC, ATP-binding, DNA-binding, microtubule, MO protein; HET: ADP; 2.30A {Homo sapiens} Length = 388 Back     alignment and structure
 Score =  368 bits (947), Expect = e-125
 Identities = 132/399 (33%), Positives = 202/399 (50%), Gaps = 34/399 (8%)

Query: 37  RSSSASYAGNDGVPGRVRVAVRLRPRNAEETVADADFADCVELQTELK-RLKLRKNNWDS 95
            SS        G P RVRVAVRLRP         A    CV         +   +N+ ++
Sbjct: 7   HSSGRENLYFQGPPARVRVAVRLRPFVDGTA--GASDPPCVRGMDSCSLEIANWRNHQET 64

Query: 96  DTYEFDEVFTESASQKRVYEVVAKPVVESVLDGYNGTVMAYGQTGTGKTFTLGRLGDEDT 155
             Y+FD  + E ++Q+ +Y    +P++  +L+G N +V+AYG TG GKT T+  LG  + 
Sbjct: 65  LKYQFDAFYGERSTQQDIYAGSVQPILRHLLEGQNASVLAYGPTGAGKTHTM--LGSPE- 121

Query: 156 SSRGIMVRSMEDILADVSLESD-------SVSVSYLQLYMETIQDLLDPANDNISIVEDP 208
              G++ R++ D+L     E         SV++SYL++Y E + DLLDPA+ ++ I ED 
Sbjct: 122 -QPGVIPRALMDLLQLTREEGAEGRPWALSVTMSYLEIYQEKVLDLLDPASGDLVIREDC 180

Query: 209 KTGDVSLPGATLVQIRDQQSFTELLRWGEAHRVAANTKLNTESSRSHAILMIHVKRSVVG 268
           +   + +PG +   I     F         +R    T+LN  SSRSHA+L++ V +    
Sbjct: 181 RGN-ILIPGLSQKPISSFADFERHFLPASRNRTVGATRLNQRSSRSHAVLLVKVDQ---- 235

Query: 269 REEDLSSEINHASHLIKPSKPLVRKSKLVVVDLAGSERIHKSGSEGHMLEEAKSINLSLS 328
           RE                     R+ KL ++DLAGSE   ++G++G  L+E+ +IN SL 
Sbjct: 236 RERLAPFRQ--------------REGKLYLIDLAGSEDNRRTGNKGLRLKESGAINTSLF 281

Query: 329 ALGKCINALAENSAHVPLRDSKLTRLLRDSFGGTARTSLIVTIGPSPRHRGETASTILFG 388
            LGK ++AL +    VP RDSKLTRLL+DS GG+A + LI  I P  R   +T S + F 
Sbjct: 282 VLGKVVDALNQGLPRVPYRDSKLTRLLQDSLGGSAHSILIANIAPERRFYLDTVSALNFA 341

Query: 389 QRAMKVENMLKIKEEFDYKSLSRRLEIQLDKLIVENERQ 427
            R+ +V N     E     +L   +++   +L+   E +
Sbjct: 342 ARSKEVINRPFTNESLQPHAL-GPVKLSQKELLGPPEAK 379
>2y65_A Kinesin, kinesin heavy chain; motor protein; HET: ADP; 2.20A {Drosophila melanogaster} PDB: 2y5w_A* Length = 365 Back     alignment and structure
>1bg2_A Kinesin; motor protein, ATPase, microtubule associated; HET: ADP; 1.80A {Homo sapiens} SCOP: c.37.1.9 PDB: 2p4n_K* 1mkj_A* 2kin_A* 3kin_A* Length = 325 Back     alignment and structure
>1goj_A Kinesin, kinesin heavy chain; motor protein, ATPase; HET: ADP; 2.3A {Neurospora crassa} SCOP: c.37.1.9 Length = 355 Back     alignment and structure
>3cob_A Kinesin heavy chain-like protein; motor, switch II, loop L11, conformation, nucleotide, ATP-binding, microtubule, motor protein; HET: ADP; 2.20A {Solanum tuberosum} SCOP: c.37.1.9 PDB: 3cnz_A* 1sdm_A* 3h4s_A* Length = 369 Back     alignment and structure
>1x88_A Kinesin-like protein KIF11; switch II, motor domain, NECK linker, cell cycle; HET: ADP NAT; 1.80A {Homo sapiens} SCOP: c.37.1.9 PDB: 3hqd_A* 3ken_A* 2pg2_A* 1yrs_A* 2fme_A* 2g1q_A* 2gm1_A* 1ii6_A* 2uyi_A* 2uym_A* 2wog_A* 2x2r_A* 2x7c_A* 2x7d_A* 2x7e_A* 2xae_A* 3k3b_A* 3k5e_A* 3l9h_A* 1q0b_A* ... Length = 359 Back     alignment and structure
>4a14_A Kinesin, kinesin-like protein KIF7; motor protein, motor domain; HET: ADP; 1.60A {Homo sapiens} PDB: 2xt3_A* Length = 344 Back     alignment and structure
>2h58_A Kinesin-like protein KIFC3 variant; motor domain, ADP, structural genomics, structur Al genomics consortium, SGC; HET: ADP; 1.85A {Homo sapiens} Length = 330 Back     alignment and structure
>2wbe_C Bipolar kinesin KRP-130; EG5, KLP61F, tubulin, mitosis, GTP-binding, motor protein, cell division, cell cycle, microtubule, ATP-binding; HET: GTP ANP GDP TA1; 9.40A {Drosophila melanogaster} Length = 373 Back     alignment and structure
>2vvg_A Kinesin-2; motor protein, nucleotide-binding, microtubule, ATP-binding; HET: ADP; 1.60A {Giardia intestinalis} Length = 350 Back     alignment and structure
>1f9v_A Kinesin-like protein KAR3; kinesin-related protein, motor protein, microtubinding proteinbule, contractIle protein; HET: ADP; 1.30A {Saccharomyces cerevisiae} SCOP: c.37.1.9 PDB: 1f9t_A* 1f9w_A* 1f9u_A* 3kar_A* Length = 347 Back     alignment and structure
>1t5c_A CENP-E protein, centromeric protein E; kinesin motor-domain-ADP complex, stranded beta-sheet core with solvent exposed alpha-helices; HET: ADP PIN; 2.50A {Homo sapiens} Length = 349 Back     alignment and structure
>3b6u_A Kinesin-like protein KIF3B; structural genomics consortium, motor domain, ADP, SGC, ATP-binding, coiled coil, microtubule, motor protein; HET: ADP; 1.80A {Homo sapiens} PDB: 3b6v_A* Length = 372 Back     alignment and structure
>4etp_A Kinesin-like protein KAR3; kinesin motor protein, kinesin motor homology domain, karyog mitosis, microtubules; HET: ADP EBC; 2.30A {Saccharomyces cerevisiae} Length = 403 Back     alignment and structure
>1ry6_A Internal kinesin; kinesin motor domain, nucleotide-free, transport protein; 1.60A {Plasmodium falciparum} SCOP: c.37.1.9 Length = 360 Back     alignment and structure
>2zfi_A Kinesin-like protein KIF1A, kinesin heavy chain isoform 5C; alpha and beta protein, enzyme, ATPase, P-loop, motor protein, ATP-binding, coiled coil; HET: ADP; 1.55A {Mus musculus} SCOP: c.37.1.9 PDB: 1vfw_A* 1vfx_A* 1vfz_A* 1vfv_A* 2zfj_A* 2zfk_A* 2zfl_A* 2zfm_A* 1i5s_A* 1i6i_A* 2hxf_C* 1ia0_K* 2hxh_C* Length = 366 Back     alignment and structure
>3dc4_A Kinesin-like protein NOD; catalytic domain, ATPase, microtubule, ADP, nucleotide-binding protein, ATP-binding, coiled coil, motor protein; HET: ADP; 1.90A {Drosophila melanogaster} PDB: 3dcb_A* 3dco_N* 3pxn_A* Length = 344 Back     alignment and structure
>2rep_A Kinesin-like protein KIFC1; structural genomics consortium, motor domain, ADP, binding, cell cycle, cell division, endosome, microtubule; HET: ADP; 2.60A {Homo sapiens} Length = 376 Back     alignment and structure
>3u06_A Protein claret segregational; motor domain, stalk rotation, power stroke, kinesin-14, MICR binding, NCD, transport, molecular motor; HET: ADP GOL; 2.35A {Drosophila melanogaster} PDB: 2ncd_A* 1n6m_A* 1cz7_A* 3l1c_A* Length = 412 Back     alignment and structure
>3lre_A Kinesin-like protein KIF18A; motor protein, nucleotide binding, microtubule binding, ATP- cell projection, cytoskeleton, glycoprotein, microtubule; HET: ADP; 2.20A {Homo sapiens} Length = 355 Back     alignment and structure
>3t0q_A AGR253WP; kinesin, alpha and beta proteins, P-loop containing nucleosi triphosphate hydrolases, microtubule motor protein; HET: ADP; 2.35A {Ashbya gossypii} Length = 349 Back     alignment and structure
>3gbj_A KIF13B protein; kinesin, motor domain, ADP, structural genomics, structural genomics consortium, SGC, ATP-binding, microtubule, motor protein; HET: ADP; 2.10A {Homo sapiens} Length = 354 Back     alignment and structure
>2owm_A Nckin3-434, related to kinesin-like protein KIF1C; motor domain, ADP, NECK linker, motor PR; HET: ADP; 3.25A {Neurospora crassa} Length = 443 Back     alignment and structure
>2heh_A KIF2C protein; kinesin, motor domain, ADP, structural genomics, structural genomics consortium, SGC, structural protein; HET: ADP; 2.15A {Homo sapiens} PDB: 3edl_D* Length = 387 Back     alignment and structure
>1v8k_A Kinesin-like protein KIF2C; microtubule destabilizer, structural P; HET: ANP; 2.25A {Mus musculus} SCOP: c.37.1.9 PDB: 1v8j_A* 2gry_A* Length = 410 Back     alignment and structure
>2kin_B Kinesin; motor protein, cytoskeleton; HET: ADP; 2.00A {Rattus norvegicus} SCOP: c.37.1.9 Length = 100 Back     alignment and structure
>3kin_B Kinesin heavy chain; motor protein, cytoskeleton; HET: ADP; 3.10A {Rattus norvegicus} SCOP: c.37.1.9 Length = 117 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>3lvg_D LCB, clathrin light chain B; SELF assembly, coated PIT, cytoplasmic vesicle, membrane, Ca structural protein; 7.94A {Bos taurus} Length = 190 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query480
2y65_A365 Kinesin, kinesin heavy chain; motor protein; HET: 100.0
3bfn_A388 Kinesin-like protein KIF22; limited proteolysis, s 100.0
1goj_A355 Kinesin, kinesin heavy chain; motor protein, ATPas 100.0
3b6u_A372 Kinesin-like protein KIF3B; structural genomics co 100.0
2vvg_A350 Kinesin-2; motor protein, nucleotide-binding, micr 100.0
3cob_A369 Kinesin heavy chain-like protein; motor, switch II 100.0
1x88_A359 Kinesin-like protein KIF11; switch II, motor domai 100.0
2wbe_C373 Bipolar kinesin KRP-130; EG5, KLP61F, tubulin, mit 100.0
2owm_A443 Nckin3-434, related to kinesin-like protein KIF1C; 100.0
1bg2_A325 Kinesin; motor protein, ATPase, microtubule associ 100.0
2zfi_A366 Kinesin-like protein KIF1A, kinesin heavy chain is 100.0
1t5c_A349 CENP-E protein, centromeric protein E; kinesin mot 100.0
2h58_A330 Kinesin-like protein KIFC3 variant; motor domain, 100.0
3lre_A355 Kinesin-like protein KIF18A; motor protein, nucleo 100.0
4a14_A344 Kinesin, kinesin-like protein KIF7; motor protein, 100.0
2rep_A376 Kinesin-like protein KIFC1; structural genomics co 100.0
3t0q_A349 AGR253WP; kinesin, alpha and beta proteins, P-loop 100.0
1f9v_A347 Kinesin-like protein KAR3; kinesin-related protein 100.0
3nwn_A359 Kinesin-like protein KIF9; motor domain, ADP, stru 100.0
2heh_A387 KIF2C protein; kinesin, motor domain, ADP, structu 100.0
3gbj_A354 KIF13B protein; kinesin, motor domain, ADP, struct 100.0
1ry6_A360 Internal kinesin; kinesin motor domain, nucleotide 100.0
2nr8_A358 Kinesin-like protein KIF9; motor domain, ADP, stru 100.0
1v8k_A410 Kinesin-like protein KIF2C; microtubule destabiliz 100.0
4etp_A403 Kinesin-like protein KAR3; kinesin motor protein, 100.0
3dc4_A344 Kinesin-like protein NOD; catalytic domain, ATPase 100.0
3u06_A412 Protein claret segregational; motor domain, stalk 100.0
4h1g_A715 Maltose binding protein-cakar3 motor domain fusio; 100.0
2kin_B100 Kinesin; motor protein, cytoskeleton; HET: ADP; 2. 99.97
3kin_B117 Kinesin heavy chain; motor protein, cytoskeleton; 99.97
2o0a_A298 S.cerevisiae chromosome XVI reading frame ORF YPL2 99.93
3ec2_A180 DNA replication protein DNAC; helicase loader, rep 95.15
2w58_A202 DNAI, primosome component (helicase loader); ATP-b 94.0
2qgz_A308 Helicase loader, putative primosome component; str 93.31
2r62_A268 Cell division protease FTSH homolog; ATPase domain 89.31
3t15_A293 Ribulose bisphosphate carboxylase/oxygenase activ 88.67
1jbk_A195 CLPB protein; beta barrel, chaperone; 1.80A {Esche 88.52
2bjv_A265 PSP operon transcriptional activator; AAA, transcr 88.51
2p65_A187 Hypothetical protein PF08_0063; CLPB, malaria, str 86.67
3b9p_A297 CG5977-PA, isoform A; AAA ATPase, ATP-binding, nuc 86.61
3h4m_A285 Proteasome-activating nucleotidase; ATPase, PAN, A 86.57
1l8q_A324 Chromosomal replication initiator protein DNAA; AA 86.52
3te6_A318 Regulatory protein SIR3; heterochromatin, gene sil 86.14
2kjq_A149 DNAA-related protein; solution structure, NESG, st 86.03
3cf0_A301 Transitional endoplasmic reticulum ATPase; AAA, P9 85.96
1ixz_A254 ATP-dependent metalloprotease FTSH; AAA domain fol 85.77
1g8p_A350 Magnesium-chelatase 38 kDa subunit; parallel beta 85.24
4b4t_K428 26S protease regulatory subunit 6B homolog; hydrol 85.12
2v1u_A387 Cell division control protein 6 homolog; DNA repli 84.67
3d8b_A357 Fidgetin-like protein 1; AAA+, ATPase, ADP, SGC, s 83.46
1d2n_A272 N-ethylmaleimide-sensitive fusion protein; hexamer 82.78
1lv7_A257 FTSH; alpha/beta domain, four helix bundle, hydrol 82.39
3bos_A242 Putative DNA replication factor; P-loop containing 82.32
4b4t_L437 26S protease subunit RPT4; hydrolase, AAA-atpases, 82.19
2qz4_A262 Paraplegin; AAA+, SPG7, protease, ADP, structural 82.15
1xwi_A322 SKD1 protein; VPS4B, AAA ATPase, protein transport 81.83
1iy2_A278 ATP-dependent metalloprotease FTSH; AAA domain fol 81.78
4b4t_M434 26S protease regulatory subunit 6A; hydrolase, AAA 81.45
1qde_A224 EIF4A, translation initiation factor 4A; DEAD box 81.45
4b4t_J405 26S protease regulatory subunit 8 homolog; hydrola 81.19
3eie_A322 Vacuolar protein sorting-associated protein 4; AAA 80.85
2z4s_A440 Chromosomal replication initiator protein DNAA; AA 80.77
1vec_A206 ATP-dependent RNA helicase P54; DEAD-box protein, 80.66
2x8a_A274 Nuclear valosin-containing protein-like; nuclear p 80.57
2gxq_A207 Heat resistant RNA dependent ATPase; RNA helicase, 80.48
3vem_A115 Helicase protein MOM1; coiled-coil, hendecad, tran 80.48
>2y65_A Kinesin, kinesin heavy chain; motor protein; HET: ADP; 2.20A {Drosophila melanogaster} PDB: 2y5w_A* Back     alignment and structure
Probab=100.00  E-value=8.9e-94  Score=731.13  Aligned_cols=345  Identities=39%  Similarity=0.608  Sum_probs=286.4

Q ss_pred             CCCCCEEEEEEcCCCCccccccCCCCCceEEeccc--ceEEEecCCCCCCCceeecccCCCCCChHHHHhhhhhhhHHHh
Q 043730           48 GVPGRVRVAVRLRPRNAEETVADADFADCVELQTE--LKRLKLRKNNWDSDTYEFDEVFTESASQKRVYEVVAKPVVESV  125 (480)
Q Consensus        48 ~~~~~v~V~vRvRP~~~~e~~~~~~~~~~v~~~~~--~~~~~~~~~~~~~~~f~FD~Vf~~~~~Q~~vf~~~~~plv~~~  125 (480)
                      +..++|+|+||+||+++.|...+.  ..++.+...  ...+..     ..+.|.||+||+++++|++||+.++.|+|+++
T Consensus         8 ~~~~~i~V~vRvRP~~~~E~~~~~--~~~v~~~~~~~~~~i~~-----~~~~f~FD~Vf~~~~~Q~~Vy~~~~~plv~~~   80 (365)
T 2y65_A            8 PAEDSIKVVCRFRPLNDSEEKAGS--KFVVKFPNNVEENCISI-----AGKVYLFDKVFKPNASQEKVYNEAAKSIVTDV   80 (365)
T ss_dssp             CCEEECEEEEEECCCCHHHHHTTC--CBCEECCSSSTTCEEEE-----TTEEEECSEEECTTCCHHHHHHHHTHHHHHHH
T ss_pred             CCCCCeEEEEEcCcCChhHhccCC--ceEEEeCCCCCCcEEEE-----CCEEEeCceEecCCCCHHHHHHHhhhhHHHHH
Confidence            345799999999999999875543  234544432  233332     24689999999999999999999999999999


Q ss_pred             ccCCceeEEecCCCCCCcccccccCCCCCCCCcchhHHHHHHHHhhcCCC----CccEEEEEEeEeechhcccCCCCCCc
Q 043730          126 LDGYNGTVMAYGQTGTGKTFTLGRLGDEDTSSRGIMVRSMEDILADVSLE----SDSVSVSYLQLYMETIQDLLDPANDN  201 (480)
Q Consensus       126 l~G~n~ti~aYGqtgSGKTyTm~g~~~~~~~~~Gii~r~~~~lf~~~~~~----~~~V~vS~~EIynE~v~DLL~~~~~~  201 (480)
                      |+|||+||||||||||||||||.|.. +++..+|||||++++||..+...    .+.|++||+|||||+|+|||++.+..
T Consensus        81 l~G~n~tifAYGqTGSGKTyTm~G~~-~~~~~~Giipr~~~~lF~~i~~~~~~~~~~v~vS~~EIYnE~i~DLL~~~~~~  159 (365)
T 2y65_A           81 LAGYNGTIFAYGQTSSGKTHTMEGVI-GDSVKQGIIPRIVNDIFNHIYAMEVNLEFHIKVSYYEIYMDKIRDLLDVSKVN  159 (365)
T ss_dssp             HTTCCEEEEEECSTTSSHHHHHTBST-TCTTTBCHHHHHHHHHHHHHHHCCSCEEEEEEEEEEEEETTEEEETTCTTCCS
T ss_pred             hCCCceEEEeecCCCCCCceEEecCC-CCcccCChHHHHHHHHHHHHHhccCCceEEEEEEEEEEECCeeeecccCCcCC
Confidence            99999999999999999999998743 34567899999999999988542    35899999999999999999998889


Q ss_pred             ceeeecCCCCceecCCCeEEEecCHHHHHHHHHHHhhcccccccCCCCCCCCceeEEEEEEEEeeccCcccccccccccc
Q 043730          202 ISIVEDPKTGDVSLPGATLVQIRDQQSFTELLRWGEAHRVAANTKLNTESSRSHAILMIHVKRSVVGREEDLSSEINHAS  281 (480)
Q Consensus       202 l~i~e~~~~g~~~v~gl~~~~v~s~~e~~~ll~~g~~~R~~~~t~~n~~SSRSH~i~~i~v~~~~~~~~~~~~~~~~~~~  281 (480)
                      +.+++++..| ++|.|++++.|.+++|++.+|..|.++|++++|.+|..|||||+||+|+|.+.....            
T Consensus       160 l~i~e~~~~~-~~v~gl~~~~V~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~if~i~v~~~~~~~------------  226 (365)
T 2y65_A          160 LSVHEDKNRV-PYVKGATERFVSSPEDVFEVIEEGKSNRHIAVTNMNEHSSRSHSVFLINVKQENLEN------------  226 (365)
T ss_dssp             BCEEECSSSC-EEETTCCCEEECSHHHHHHHHHHHHHHHTTTCSCHHHHHHTSEEEEEEEEEEEETTT------------
T ss_pred             ceEEECCCCC-EEecCCEEEecCCHHHHHHHHHHHHhhcccccccCCCCCCCceEEEEEEEEEEecCC------------
Confidence            9999998654 999999999999999999999999999999999999999999999999998865432            


Q ss_pred             cccCCCCCceeeeeEEEEeCCCCcccccCCCccchHHHHHHHhhhHHHHHHHHHHHhhC-CCCCCCCCCcccccccccCC
Q 043730          282 HLIKPSKPLVRKSKLVVVDLAGSERIHKSGSEGHMLEEAKSINLSLSALGKCINALAEN-SAHVPLRDSKLTRLLRDSFG  360 (480)
Q Consensus       282 ~~~~~~~~~~~~s~L~lVDLAGSEr~~~~~~~g~~~~E~~~IN~SL~~L~~vI~aL~~~-~~~iPyRdSkLT~LL~dsLg  360 (480)
                             .....|+|+|||||||||..++++.|.+++|+.+||+||++||+||.+|+++ ..||||||||||+||||+||
T Consensus       227 -------~~~~~skL~lVDLAGSEr~~~t~~~g~rl~E~~~INkSL~aLg~vI~aL~~~~~~hvPyRdSkLT~lLqdsLg  299 (365)
T 2y65_A          227 -------QKKLSGKLYLVDLAGSEKVSKTGAEGTVLDEAKNINKSLSALGNVISALADGNKTHIPYRDSKLTRILQESLG  299 (365)
T ss_dssp             -------CCEEEEEEEEEECCCCCC----------------CCHHHHHHHHHHHHHHHCCCSCCCGGGCHHHHHTGGGTT
T ss_pred             -------CCEeEEEEEEEECCCCCcchhcCCcchhHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccCHHHHHHHhhcC
Confidence                   2346799999999999999999999999999999999999999999999987 57999999999999999999


Q ss_pred             CCceeeEEEeeCCCCCChHHhHHHHHHHHHhccccccccccccCCHHHHHHHHHHHHHHH
Q 043730          361 GTARTSLIVTIGPSPRHRGETASTILFGQRAMKVENMLKIKEEFDYKSLSRRLEIQLDKL  420 (480)
Q Consensus       361 Gns~t~~I~~isp~~~~~~eTl~TL~fa~ra~~I~n~~~~~~~~~~~~~~~~l~~~~~~l  420 (480)
                      |||+|+||+||||+..+++||++||+||+||++|+|.|.+|++.+.+.+.++|+++++++
T Consensus       300 Gnskt~mI~~isP~~~~~~ETl~TL~fA~rak~I~n~~~~n~~~~~~~~~~~~~~e~~~~  359 (365)
T 2y65_A          300 GNARTTIVICCSPASFNESETKSTLDFGRRAKTVKNVVCVNEELTAEEWKRRYEKEKEKN  359 (365)
T ss_dssp             SSSEEEEEEEECCBGGGHHHHHHHHHHHHHHTTCEEECCCEEECCSHHHHHC--------
T ss_pred             CCccEEEEEEecCccCCHHHHHHHHHHHHHHhcccCcceeCCCCCHHHHHHHHHHHHHHH
Confidence            999999999999999999999999999999999999999999998888877777665554
>3bfn_A Kinesin-like protein KIF22; limited proteolysis, structural genomics consortium domain, ADP, SGC, ATP-binding, DNA-binding, microtubule, MO protein; HET: ADP; 2.30A {Homo sapiens} Back     alignment and structure
>1goj_A Kinesin, kinesin heavy chain; motor protein, ATPase; HET: ADP; 2.3A {Neurospora crassa} SCOP: c.37.1.9 Back     alignment and structure
>3b6u_A Kinesin-like protein KIF3B; structural genomics consortium, motor domain, ADP, SGC, ATP-binding, coiled coil, microtubule, motor protein; HET: ADP; 1.80A {Homo sapiens} PDB: 3b6v_A* Back     alignment and structure
>2vvg_A Kinesin-2; motor protein, nucleotide-binding, microtubule, ATP-binding; HET: ADP; 1.60A {Giardia intestinalis} Back     alignment and structure
>3cob_A Kinesin heavy chain-like protein; motor, switch II, loop L11, conformation, nucleotide, ATP-binding, microtubule, motor protein; HET: ADP; 2.20A {Solanum tuberosum} SCOP: c.37.1.9 PDB: 3cnz_A* 1sdm_A* 3h4s_A* Back     alignment and structure
>1x88_A Kinesin-like protein KIF11; switch II, motor domain, NECK linker, cell cycle; HET: ADP NAT; 1.80A {Homo sapiens} SCOP: c.37.1.9 PDB: 3hqd_A* 3ken_A* 2pg2_A* 1yrs_A* 2fme_A* 2g1q_A* 2gm1_A* 1ii6_A* 2uyi_A* 2uym_A* 2wog_A* 2x2r_A* 2x7c_A* 2x7d_A* 2x7e_A* 2xae_A* 3k3b_A* 3k5e_A* 3l9h_A* 1q0b_A* ... Back     alignment and structure
>2wbe_C Bipolar kinesin KRP-130; EG5, KLP61F, tubulin, mitosis, GTP-binding, motor protein, cell division, cell cycle, microtubule, ATP-binding; HET: GTP ANP GDP TA1; 9.40A {Drosophila melanogaster} Back     alignment and structure
>2owm_A Nckin3-434, related to kinesin-like protein KIF1C; motor domain, ADP, NECK linker, motor PR; HET: ADP; 3.25A {Neurospora crassa} Back     alignment and structure
>1bg2_A Kinesin; motor protein, ATPase, microtubule associated; HET: ADP; 1.80A {Homo sapiens} SCOP: c.37.1.9 PDB: 2p4n_K* 1mkj_A* 2kin_A* 3kin_A* Back     alignment and structure
>2zfi_A Kinesin-like protein KIF1A, kinesin heavy chain isoform 5C; alpha and beta protein, enzyme, ATPase, P-loop, motor protein, ATP-binding, coiled coil; HET: ADP; 1.55A {Mus musculus} SCOP: c.37.1.9 PDB: 1vfw_A* 1vfx_A* 1vfz_A* 1vfv_A* 2zfj_A* 2zfk_A* 2zfl_A* 2zfm_A* 1i5s_A* 1i6i_A* 2hxf_C* 1ia0_K* 2hxh_C* Back     alignment and structure
>1t5c_A CENP-E protein, centromeric protein E; kinesin motor-domain-ADP complex, stranded beta-sheet core with solvent exposed alpha-helices; HET: ADP PIN; 2.50A {Homo sapiens} Back     alignment and structure
>2h58_A Kinesin-like protein KIFC3 variant; motor domain, ADP, structural genomics, structur Al genomics consortium, SGC; HET: ADP; 1.85A {Homo sapiens} Back     alignment and structure
>3lre_A Kinesin-like protein KIF18A; motor protein, nucleotide binding, microtubule binding, ATP- cell projection, cytoskeleton, glycoprotein, microtubule; HET: ADP; 2.20A {Homo sapiens} SCOP: c.37.1.0 Back     alignment and structure
>4a14_A Kinesin, kinesin-like protein KIF7; motor protein, motor domain; HET: ADP; 1.60A {Homo sapiens} SCOP: c.37.1.0 PDB: 2xt3_A* Back     alignment and structure
>2rep_A Kinesin-like protein KIFC1; structural genomics consortium, motor domain, ADP, binding, cell cycle, cell division, endosome, microtubule; HET: ADP; 2.60A {Homo sapiens} Back     alignment and structure
>3t0q_A AGR253WP; kinesin, alpha and beta proteins, P-loop containing nucleosi triphosphate hydrolases, microtubule motor protein; HET: ADP; 2.35A {Ashbya gossypii} Back     alignment and structure
>1f9v_A Kinesin-like protein KAR3; kinesin-related protein, motor protein, microtubinding proteinbule, contractIle protein; HET: ADP; 1.30A {Saccharomyces cerevisiae} SCOP: c.37.1.9 PDB: 1f9t_A* 1f9w_A* 1f9u_A* 3kar_A* Back     alignment and structure
>3nwn_A Kinesin-like protein KIF9; motor domain, ADP, structural genomics, structural consortium, SGC, contractIle protein; HET: ADP; 2.00A {Homo sapiens} Back     alignment and structure
>2heh_A KIF2C protein; kinesin, motor domain, ADP, structural genomics, structural genomics consortium, SGC, structural protein; HET: ADP; 2.15A {Homo sapiens} PDB: 3edl_D* Back     alignment and structure
>3gbj_A KIF13B protein; kinesin, motor domain, ADP, structural genomics, structural genomics consortium, SGC, ATP-binding, microtubule, motor protein; HET: ADP; 2.10A {Homo sapiens} SCOP: c.37.1.9 Back     alignment and structure
>1ry6_A Internal kinesin; kinesin motor domain, nucleotide-free, transport protein; 1.60A {Plasmodium falciparum} SCOP: c.37.1.9 Back     alignment and structure
>1v8k_A Kinesin-like protein KIF2C; microtubule destabilizer, structural P; HET: ANP; 2.25A {Mus musculus} SCOP: c.37.1.9 PDB: 1v8j_A* 2gry_A* Back     alignment and structure
>4etp_A Kinesin-like protein KAR3; kinesin motor protein, kinesin motor homology domain, karyog mitosis, microtubules; HET: ADP EBC; 2.30A {Saccharomyces cerevisiae} Back     alignment and structure
>3dc4_A Kinesin-like protein NOD; catalytic domain, ATPase, microtubule, ADP, nucleotide-binding protein, ATP-binding, coiled coil, motor protein; HET: ADP; 1.90A {Drosophila melanogaster} PDB: 3dcb_A* 3dco_N* 3pxn_A* Back     alignment and structure
>3u06_A Protein claret segregational; motor domain, stalk rotation, power stroke, kinesin-14, MICR binding, NCD, transport, molecular motor; HET: ADP GOL; 2.35A {Drosophila melanogaster} PDB: 2ncd_A* 1n6m_A* 1cz7_A* 3l1c_A* Back     alignment and structure
>4h1g_A Maltose binding protein-cakar3 motor domain fusio; kinesin motor domain, motor protein, chimera; HET: MTT ADP EDO; 2.15A {Escherichia coli} Back     alignment and structure
>2kin_B Kinesin; motor protein, cytoskeleton; HET: ADP; 2.00A {Rattus norvegicus} SCOP: c.37.1.9 Back     alignment and structure
>3kin_B Kinesin heavy chain; motor protein, cytoskeleton; HET: ADP; 3.10A {Rattus norvegicus} SCOP: c.37.1.9 Back     alignment and structure
>2o0a_A S.cerevisiae chromosome XVI reading frame ORF YPL253C; VIK1, motor homology domain, kinesin, motor domain, microtubule-binding; 1.60A {Saccharomyces cerevisiae} Back     alignment and structure
>3ec2_A DNA replication protein DNAC; helicase loader, replication initiation factor, ATP-binding, nucleotide-binding; HET: DNA ADP; 2.70A {Aquifex aeolicus} PDB: 3ecc_A* Back     alignment and structure
>2w58_A DNAI, primosome component (helicase loader); ATP-binding, nucleotide-binding, hydrolase; HET: ADP; 2.50A {Geobacillus kaustophilus HTA426} Back     alignment and structure
>2qgz_A Helicase loader, putative primosome component; structural genomics, PSI-2, protein structure initiative; 2.40A {Streptococcus pyogenes serotype M3} Back     alignment and structure
>2r62_A Cell division protease FTSH homolog; ATPase domain, ATP-binding, cell CELL division, hydrolase, membrane, metal-binding; 3.30A {Helicobacter pylori} PDB: 2r65_A* Back     alignment and structure
>3t15_A Ribulose bisphosphate carboxylase/oxygenase activ chloroplastic; photosynthesis, rubisco activase, AAA+ protein; 2.95A {Nicotiana tabacum} PDB: 3zw6_A Back     alignment and structure
>1jbk_A CLPB protein; beta barrel, chaperone; 1.80A {Escherichia coli} SCOP: c.37.1.20 Back     alignment and structure
>2bjv_A PSP operon transcriptional activator; AAA, transcription activation, gene regulation, sigma54 activator, enhancer binding protein, PSPF; 1.7A {Escherichia coli} PDB: 2bjw_A 2c96_A* 2c98_A* 2c99_A* 2c9c_A* 2vii_A* Back     alignment and structure
>2p65_A Hypothetical protein PF08_0063; CLPB, malaria, structural genomics, structural genomics consortium, SGC, unknown function; 1.70A {Plasmodium falciparum} Back     alignment and structure
>3b9p_A CG5977-PA, isoform A; AAA ATPase, ATP-binding, nucleotide-binding, hydrolase; 2.70A {Drosophila melanogaster} Back     alignment and structure
>3h4m_A Proteasome-activating nucleotidase; ATPase, PAN, ATP-binding, nucleotide-binding, HY; HET: ADP; 3.11A {Methanocaldococcus jannaschii} Back     alignment and structure
>1l8q_A Chromosomal replication initiator protein DNAA; AAA+, helix-turn-helix, nucleotide-binding, DNA binding, REP initiation, DNA binding protein; HET: ADP; 2.70A {Aquifex aeolicus} SCOP: a.4.12.2 c.37.1.20 PDB: 3r8f_A* 2hcb_A* Back     alignment and structure
>3te6_A Regulatory protein SIR3; heterochromatin, gene silencing, SIR complex, HMR, HML, TELO AAA+ domain, structural, nucleus, gene RE; 2.80A {Saccharomyces cerevisiae} Back     alignment and structure
>2kjq_A DNAA-related protein; solution structure, NESG, structural genomics, PSI-2, protei structure initiative; NMR {Neisseria meningitidis serogroup B} Back     alignment and structure
>3cf0_A Transitional endoplasmic reticulum ATPase; AAA, P97/VCP, ERAD, CDC48, ATP-binding, lipid-binding, nucle binding, nucleus, phosphoprotein, transport; HET: ADP; 3.00A {Mus musculus} Back     alignment and structure
>1ixz_A ATP-dependent metalloprotease FTSH; AAA domain fold, hydrolase; 2.20A {Thermus thermophilus} SCOP: c.37.1.20 PDB: 1iy0_A* 1iy1_A* Back     alignment and structure
>1g8p_A Magnesium-chelatase 38 kDa subunit; parallel beta sheet, P-loop, rossman fold, AAA+, photosynthesis, metal transport; 2.10A {Rhodobacter capsulatus} SCOP: c.37.1.20 PDB: 2x31_G Back     alignment and structure
>4b4t_K 26S protease regulatory subunit 6B homolog; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae} Back     alignment and structure
>2v1u_A Cell division control protein 6 homolog; DNA replication, nucleotide-binding, replication, archaea; HET: ADP; 3.10A {Aeropyrum pernix} Back     alignment and structure
>3d8b_A Fidgetin-like protein 1; AAA+, ATPase, ADP, SGC, structural genomics consortium, ATP- hydrolase, magnesium, metal-binding, nucleotide-binding; HET: ADP; 2.00A {Homo sapiens} Back     alignment and structure
>1d2n_A N-ethylmaleimide-sensitive fusion protein; hexamerization domain, ATPase, transport; HET: ANP; 1.75A {Cricetulus griseus} SCOP: c.37.1.20 PDB: 1nsf_A* Back     alignment and structure
>1lv7_A FTSH; alpha/beta domain, four helix bundle, hydrolase; 1.50A {Escherichia coli} SCOP: c.37.1.20 Back     alignment and structure
>3bos_A Putative DNA replication factor; P-loop containing nucleoside triphosphate hydrolases, struct genomics; HET: MSE CDP; 1.75A {Shewanella amazonensis} PDB: 3sc3_A Back     alignment and structure
>4b4t_L 26S protease subunit RPT4; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae} Back     alignment and structure
>2qz4_A Paraplegin; AAA+, SPG7, protease, ADP, structural genomics, structural G consortium, SGC, ATP-binding, nucleotide-binding, hydrolase; HET: ADP; 2.22A {Homo sapiens} Back     alignment and structure
>1xwi_A SKD1 protein; VPS4B, AAA ATPase, protein transport; 2.80A {Homo sapiens} Back     alignment and structure
>1iy2_A ATP-dependent metalloprotease FTSH; AAA domain fold, hydrolase; 3.20A {Thermus thermophilus} SCOP: c.37.1.20 Back     alignment and structure
>4b4t_M 26S protease regulatory subunit 6A; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae} Back     alignment and structure
>1qde_A EIF4A, translation initiation factor 4A; DEAD box protein family, gene regulation; 2.00A {Saccharomyces cerevisiae} SCOP: c.37.1.19 PDB: 1qva_A Back     alignment and structure
>4b4t_J 26S protease regulatory subunit 8 homolog; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae} Back     alignment and structure
>3eie_A Vacuolar protein sorting-associated protein 4; AAA ATPase, ATP-binding cassette, ATP-binding, endosome, MEM nucleotide-binding; 2.70A {Saccharomyces cerevisiae} PDB: 3eih_A* 2rko_A 3mhv_C Back     alignment and structure
>2z4s_A Chromosomal replication initiator protein DNAA; AAA+ ATPase, domain III (ATPase domain), ATP-binding, cytoplasm, DNA replication; HET: ADP; 3.00A {Thermotoga maritima} PDB: 2z4r_A* Back     alignment and structure
>1vec_A ATP-dependent RNA helicase P54; DEAD-box protein, RNA binding protein; HET: TLA; 2.01A {Homo sapiens} SCOP: c.37.1.19 Back     alignment and structure
>2x8a_A Nuclear valosin-containing protein-like; nuclear protein; 2.60A {Homo sapiens} Back     alignment and structure
>2gxq_A Heat resistant RNA dependent ATPase; RNA helicase, atomic resolution, AMP complex, ribosome biogenesis, thermophilic, hydrolase; HET: AMP; 1.20A {Thermus thermophilus HB27} PDB: 2gxs_A* 2gxu_A 3mwj_A 3mwk_A* 3mwl_A* 3nbf_A* 3nej_A Back     alignment and structure
>3vem_A Helicase protein MOM1; coiled-coil, hendecad, transcriptional gene silencing, siRNA nucleus, chromatin, transcription; 3.20A {Arabidopsis thaliana} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 480
d1bg2a_323 c.37.1.9 (A:) Kinesin {Human (Homo sapiens) [TaxId 3e-75
d1goja_354 c.37.1.9 (A:) Kinesin {Neurospora crassa [TaxId: 5 4e-74
d1x88a1345 c.37.1.9 (A:18-362) Kinesin {Human (Homo sapiens), 7e-72
d1ry6a_330 c.37.1.9 (A:) Kinesin {Malaria parasite (Plasmodiu 2e-68
d1v8ka_362 c.37.1.9 (A:) Kinesin {Mouse (Mus musculus), kif2c 9e-67
d2zfia1349 c.37.1.9 (A:4-352) Kinesin {Mouse (Mus musculus), 2e-66
d1f9va_342 c.37.1.9 (A:) Kinesin motor Ncd (non-claret disjun 9e-65
d1sdma_364 c.37.1.9 (A:) Kinesin heavy chain-like protein {Po 3e-64
d2ncda_368 c.37.1.9 (A:) Kinesin motor Ncd (non-claret disjun 1e-58
>d1bg2a_ c.37.1.9 (A:) Kinesin {Human (Homo sapiens) [TaxId: 9606]} Length = 323 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Motor proteins
domain: Kinesin
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  237 bits (605), Expect = 3e-75
 Identities = 132/346 (38%), Positives = 192/346 (55%), Gaps = 33/346 (9%)

Query: 53  VRVAVRLRPRNAEETVADADFADCVELQTELKRLKLRKNNWDSDTYEFDEVFTESASQKR 112
           ++V  R RP N  E   +       + Q E   +   K       Y FD VF  S SQ++
Sbjct: 7   IKVMCRFRPLNESEV--NRGDKYIAKFQGEDTVVIASK------PYAFDRVFQSSTSQEQ 58

Query: 113 VYEVVAKPVVESVLDGYNGTVMAYGQTGTGKTFTLGRLGDEDTSSRGIMVRSMEDILADV 172
           VY   AK +V+ VL+GYNGT+ AYGQT +GKT T+      D    GI+ R ++DI   +
Sbjct: 59  VYNDCAKKIVKDVLEGYNGTIFAYGQTSSGKTHTM-EGKLHDPEGMGIIPRIVQDIFNYI 117

Query: 173 SLESD----SVSVSYLQLYMETIQDLLDPANDNISIVEDPKTGDVSLPGATLVQIRDQQS 228
               +     + VSY ++Y++ I+DLLD +  N+S+ ED       + G T   +     
Sbjct: 118 YSMDENLEFHIKVSYFEIYLDKIRDLLDVSKTNLSVHEDKNR-VPYVKGCTERFVCSPDE 176

Query: 229 FTELLRWGEAHRVAANTKLNTESSRSHAILMIHVKRSVVGREEDLSSEINHASHLIKPSK 288
             + +  G+++R  A T +N  SSRSH+I +I+VK+     E+                 
Sbjct: 177 VMDTIDEGKSNRHVAVTNMNEHSSRSHSIFLINVKQENTQTEQ----------------- 219

Query: 289 PLVRKSKLVVVDLAGSERIHKSGSEGHMLEEAKSINLSLSALGKCINALAENSAHVPLRD 348
                 KL +VDLAGSE++ K+G+EG +L+EAK+IN SLSALG  I+ALAE S +VP RD
Sbjct: 220 --KLSGKLYLVDLAGSEKVSKTGAEGAVLDEAKNINKSLSALGNVISALAEGSTYVPYRD 277

Query: 349 SKLTRLLRDSFGGTARTSLIVTIGPSPRHRGETASTILFGQRAMKV 394
           SK+TR+L+DS GG  RT++++   PS  +  ET ST+LFGQRA  +
Sbjct: 278 SKMTRILQDSLGGNCRTTIVICCSPSSYNESETKSTLLFGQRAKTI 323
>d1goja_ c.37.1.9 (A:) Kinesin {Neurospora crassa [TaxId: 5141]} Length = 354 Back     information, alignment and structure
>d1x88a1 c.37.1.9 (A:18-362) Kinesin {Human (Homo sapiens), mitotic kinesin eg5 [TaxId: 9606]} Length = 345 Back     information, alignment and structure
>d1ry6a_ c.37.1.9 (A:) Kinesin {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} Length = 330 Back     information, alignment and structure
>d1v8ka_ c.37.1.9 (A:) Kinesin {Mouse (Mus musculus), kif2c [TaxId: 10090]} Length = 362 Back     information, alignment and structure
>d2zfia1 c.37.1.9 (A:4-352) Kinesin {Mouse (Mus musculus), kif1a [TaxId: 10090]} Length = 349 Back     information, alignment and structure
>d1f9va_ c.37.1.9 (A:) Kinesin motor Ncd (non-claret disjunctional) {Baker's yeast (Saccharomyces cerevisiae), Kar [TaxId: 4932]} Length = 342 Back     information, alignment and structure
>d1sdma_ c.37.1.9 (A:) Kinesin heavy chain-like protein {Potato (Solanum tuberosum) [TaxId: 4113]} Length = 364 Back     information, alignment and structure
>d2ncda_ c.37.1.9 (A:) Kinesin motor Ncd (non-claret disjunctional) {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 368 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query480
d1sdma_364 Kinesin heavy chain-like protein {Potato (Solanum 100.0
d1goja_354 Kinesin {Neurospora crassa [TaxId: 5141]} 100.0
d1v8ka_362 Kinesin {Mouse (Mus musculus), kif2c [TaxId: 10090 100.0
d1x88a1345 Kinesin {Human (Homo sapiens), mitotic kinesin eg5 100.0
d2zfia1349 Kinesin {Mouse (Mus musculus), kif1a [TaxId: 10090 100.0
d1bg2a_323 Kinesin {Human (Homo sapiens) [TaxId: 9606]} 100.0
d1f9va_342 Kinesin motor Ncd (non-claret disjunctional) {Bake 100.0
d1ry6a_330 Kinesin {Malaria parasite (Plasmodium falciparum) 100.0
d2ncda_368 Kinesin motor Ncd (non-claret disjunctional) {Frui 100.0
d1l8qa2213 Chromosomal replication initiation factor DnaA {Aq 94.52
d1r7ra3265 Membrane fusion ATPase VCP/p97 {Mouse (Mus musculu 93.15
d1w5sa2287 CDC6-like protein APE0152, N-terminal domain {Aero 93.02
d1lv7a_256 AAA domain of cell division protein FtsH {Escheric 89.88
d1gvnb_273 Plasmid maintenance system epsilon/zeta, toxin zet 89.46
d1p9ra_401 Extracellular secretion NTPase EpsE {Vibrio choler 87.96
d1e32a2258 Membrane fusion ATPase VCP/p97 {Mouse (Mus musculu 86.63
d1fnna2276 CDC6, N-domain {Archaeon Pyrobaculum aerophilum [T 86.09
d1sxjd2237 Replication factor C2 {Baker's yeast (Saccharomyce 85.04
d1ixza_247 AAA domain of cell division protein FtsH {Thermus 85.01
d1d2na_246 Hexamerization domain of N-ethylmalemide-sensitive 84.1
d1okkd2207 GTPase domain of the signal recognition particle r 82.88
d1iqpa2231 Replication factor C {Archaeon Pyrococcus furiosus 82.44
d1sxjc2227 Replication factor C3 {Baker's yeast (Saccharomyce 80.56
d1gkub1237 Helicase-like "domain" of reverse gyrase {Archaeon 80.55
d1qdea_212 Initiation factor 4a {Baker's yeast (Saccharomyces 80.38
d1gm5a3264 RecG helicase domain {Thermotoga maritima [TaxId: 80.14
>d1sdma_ c.37.1.9 (A:) Kinesin heavy chain-like protein {Potato (Solanum tuberosum) [TaxId: 4113]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Motor proteins
domain: Kinesin heavy chain-like protein
species: Potato (Solanum tuberosum) [TaxId: 4113]

Probab=100.00  E-value=4.1e-84  Score=662.09  Aligned_cols=342  Identities=34%  Similarity=0.506  Sum_probs=285.7

Q ss_pred             CEEEEEEcCCCCccccccCCCCCceEEecccceEEEecCCCCCCCceeecccCCCCCChHHHHhhhhhhhHHHhccCCce
Q 043730           52 RVRVAVRLRPRNAEETVADADFADCVELQTELKRLKLRKNNWDSDTYEFDEVFTESASQKRVYEVVAKPVVESVLDGYNG  131 (480)
Q Consensus        52 ~v~V~vRvRP~~~~e~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~f~FD~Vf~~~~~Q~~vf~~~~~plv~~~l~G~n~  131 (480)
                      +|+|+|||||+.+.|...+.  ..++.......... .......+.|.||+||+++++|++||+.+ .|+|+++|+|||+
T Consensus         1 rIkV~vRvRP~~~~E~~~~~--~~~v~~~~~~~~~~-~~~~~~~~~f~FD~vf~~~~~q~~vy~~v-~~lv~~~l~G~n~   76 (364)
T d1sdma_           1 KIRVYCRLRPLCEKEIIAKE--RNAIRSVDEFTVEH-LWKDDKAKQHMYDRVFDGNATQDDVFEDT-KYLVQSAVDGYNV   76 (364)
T ss_dssp             CCEEEEEECCCCHHHHHTTC--CBCEEECSTTEEEE-ECSSSSEEEEECSEEECTTCCHHHHHHTT-THHHHHHHTTCEE
T ss_pred             CeEEEEEcCCCChhhcccCC--CCeEEeCCCCeEEe-cCCCCCceEEECCeecCCCCCHHHHHHHH-HHHHHHHhcCCce
Confidence            68999999999998865543  34555444333322 22333568999999999999999999975 8999999999999


Q ss_pred             eEEecCCCCCCcccccccCCCCCCCCcchhHHHHHHHHhhcCCC----CccEEEEEEeEeechhcccCCCCCC---ccee
Q 043730          132 TVMAYGQTGTGKTFTLGRLGDEDTSSRGIMVRSMEDILADVSLE----SDSVSVSYLQLYMETIQDLLDPAND---NISI  204 (480)
Q Consensus       132 ti~aYGqtgSGKTyTm~g~~~~~~~~~Gii~r~~~~lf~~~~~~----~~~V~vS~~EIynE~v~DLL~~~~~---~l~i  204 (480)
                      ||||||||||||||||+|.    ..++||+||++.+||..+...    .+.|++||+|||||+|+|||.|...   .+.+
T Consensus        77 ~i~aYGqTGSGKTyTm~G~----~~~~Giipr~~~~lf~~i~~~~~~~~~~v~~S~~EIyne~i~DLL~~~~~~~~~l~~  152 (364)
T d1sdma_          77 CIFAYGQTGSGKTFTIYGA----DSNPGLTPRAMSELFRIMKKDSNKFSFSLKAYMVELYQDTLVDLLLPKQAKRLKLDI  152 (364)
T ss_dssp             EEEEECSTTSSHHHHHTBC----SSSBCHHHHHHHHHHHHHHHGGGTEEEEEEEEEEEESSSCEEETTSCTTSCCCCCEE
T ss_pred             eeeccccCCCCcccccccC----ccccchhHHHHHHHHhhhhhccccccceEEEEEEEEeccccccccCcccccccccce
Confidence            9999999999999999763    346899999999999987653    3479999999999999999987543   5678


Q ss_pred             eecCCCCceecCCCeEEEecCHHHHHHHHHHHhhcccccccCCCCCCCCceeEEEEEEEEeeccCccccccccccccccc
Q 043730          205 VEDPKTGDVSLPGATLVQIRDQQSFTELLRWGEAHRVAANTKLNTESSRSHAILMIHVKRSVVGREEDLSSEINHASHLI  284 (480)
Q Consensus       205 ~e~~~~g~~~v~gl~~~~v~s~~e~~~ll~~g~~~R~~~~t~~n~~SSRSH~i~~i~v~~~~~~~~~~~~~~~~~~~~~~  284 (480)
                      ++++..| ++|.|++++.|.+++|++.+|..|.++|++++|.+|..|||||+||+|++.+...+.               
T Consensus       153 ~~~~~~~-~~v~~l~~~~v~s~~~~~~~l~~g~~~R~~~~t~~n~~ssRsH~i~~i~v~~~~~~~---------------  216 (364)
T d1sdma_         153 KKDSKGM-VSVENVTVVSISTYEELKTIIQRGSEQRHTTGTLMNEQSSRSHLIVSVIIESTNLQT---------------  216 (364)
T ss_dssp             EECTTSC-EEEETCCCEEECSHHHHHHHHHHHHHHHCCCSSCTTCHHHHSEEEEEEEEEEEETTT---------------
T ss_pred             eecccCc-cccccceeeeeCCHHHHHHHhhccceeeccccccccccccccceEEEEEEEEeccCc---------------
Confidence            8887654 999999999999999999999999999999999999999999999999998865533               


Q ss_pred             CCCCCceeeeeEEEEeCCCCcccccCCCccchHHHHHHHhhhHHHHHHHHHHHhhCCCCCCCCCCcccccccccCCCCce
Q 043730          285 KPSKPLVRKSKLVVVDLAGSERIHKSGSEGHMLEEAKSINLSLSALGKCINALAENSAHVPLRDSKLTRLLRDSFGGTAR  364 (480)
Q Consensus       285 ~~~~~~~~~s~L~lVDLAGSEr~~~~~~~g~~~~E~~~IN~SL~~L~~vI~aL~~~~~~iPyRdSkLT~LL~dsLgGns~  364 (480)
                          .....++|+|||||||||..++++.|.+++|+.+||+||++|++||.+|+++..|||||+||||+||+|+|||||+
T Consensus       217 ----~~~~~~kl~~vDLAGsEr~~~~~~~g~~~~E~~~iN~SL~~L~~vi~aL~~~~~~ipyR~SkLT~lL~d~Lggns~  292 (364)
T d1sdma_         217 ----QAIARGKLSFVDLAGSERVKKSGSAGNQLKEAQSINKSLSALGDVISALSSGNQHIPYRNHKLTMLMSDSLGGNAK  292 (364)
T ss_dssp             ----CCEEEEEEEEEECCCCSCCCC---------CCCTTCHHHHHHHHHHHHHHHTCSCCCGGGCHHHHHTTTTTTSSSE
T ss_pred             ----ceeeeEEEEeechhhccccccccccCceeeeccccccchhhHHHHHHHHHcCCCcCCchhhhhhHHHHhhcCCCce
Confidence                2457899999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             eeEEEeeCCCCCChHHhHHHHHHHHHhccccccccccccCCHHHHHHHHHHHHHHHHHHH
Q 043730          365 TSLIVTIGPSPRHRGETASTILFGQRAMKVENMLKIKEEFDYKSLSRRLEIQLDKLIVEN  424 (480)
Q Consensus       365 t~~I~~isp~~~~~~eTl~TL~fa~ra~~I~n~~~~~~~~~~~~~~~~l~~~~~~l~~e~  424 (480)
                      |+||+||||+..+++||++||+||++|++|+|.|.+|....   .+.+|+.++..|+.++
T Consensus       293 t~~I~~isp~~~~~~eTl~TL~fa~~ak~i~n~p~~n~~~~---~~~~l~~~i~~l~~~~  349 (364)
T d1sdma_         293 TLMFVNISPAESNLDETHNSLTYASRVRSIVNDPSKNVSSK---EVARLKKLVSYWKEQA  349 (364)
T ss_dssp             EEEEEEECCBGGGHHHHHHHHHHHHHHTTCCCCCCCCEECH---HHHHHHTTTTCC----
T ss_pred             EEEEEEeCCCcchHHHHHHHHHHHHHHhhcccCCcccCCHH---HHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999987542   2344555555554443
>d1goja_ c.37.1.9 (A:) Kinesin {Neurospora crassa [TaxId: 5141]} Back     information, alignment and structure
>d1v8ka_ c.37.1.9 (A:) Kinesin {Mouse (Mus musculus), kif2c [TaxId: 10090]} Back     information, alignment and structure
>d1x88a1 c.37.1.9 (A:18-362) Kinesin {Human (Homo sapiens), mitotic kinesin eg5 [TaxId: 9606]} Back     information, alignment and structure
>d2zfia1 c.37.1.9 (A:4-352) Kinesin {Mouse (Mus musculus), kif1a [TaxId: 10090]} Back     information, alignment and structure
>d1bg2a_ c.37.1.9 (A:) Kinesin {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1f9va_ c.37.1.9 (A:) Kinesin motor Ncd (non-claret disjunctional) {Baker's yeast (Saccharomyces cerevisiae), Kar [TaxId: 4932]} Back     information, alignment and structure
>d1ry6a_ c.37.1.9 (A:) Kinesin {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} Back     information, alignment and structure
>d2ncda_ c.37.1.9 (A:) Kinesin motor Ncd (non-claret disjunctional) {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Back     information, alignment and structure
>d1l8qa2 c.37.1.20 (A:77-289) Chromosomal replication initiation factor DnaA {Aquifex aeolicus [TaxId: 63363]} Back     information, alignment and structure
>d1r7ra3 c.37.1.20 (A:471-735) Membrane fusion ATPase VCP/p97 {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1w5sa2 c.37.1.20 (A:7-293) CDC6-like protein APE0152, N-terminal domain {Aeropyrum pernix [TaxId: 56636]} Back     information, alignment and structure
>d1lv7a_ c.37.1.20 (A:) AAA domain of cell division protein FtsH {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1gvnb_ c.37.1.21 (B:) Plasmid maintenance system epsilon/zeta, toxin zeta subunit {Streptococcus pyogenes [TaxId: 1314]} Back     information, alignment and structure
>d1p9ra_ c.37.1.11 (A:) Extracellular secretion NTPase EpsE {Vibrio cholerae [TaxId: 666]} Back     information, alignment and structure
>d1e32a2 c.37.1.20 (A:201-458) Membrane fusion ATPase VCP/p97 {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1fnna2 c.37.1.20 (A:1-276) CDC6, N-domain {Archaeon Pyrobaculum aerophilum [TaxId: 13773]} Back     information, alignment and structure
>d1sxjd2 c.37.1.20 (D:26-262) Replication factor C2 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1ixza_ c.37.1.20 (A:) AAA domain of cell division protein FtsH {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1d2na_ c.37.1.20 (A:) Hexamerization domain of N-ethylmalemide-sensitive fusion (NSF) protein {Chinese hamster (Cricetulus griseus) [TaxId: 10029]} Back     information, alignment and structure
>d1okkd2 c.37.1.10 (D:97-303) GTPase domain of the signal recognition particle receptor FtsY {Thermus aquaticus [TaxId: 271]} Back     information, alignment and structure
>d1iqpa2 c.37.1.20 (A:2-232) Replication factor C {Archaeon Pyrococcus furiosus [TaxId: 2261]} Back     information, alignment and structure
>d1sxjc2 c.37.1.20 (C:12-238) Replication factor C3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1gkub1 c.37.1.16 (B:1-250) Helicase-like "domain" of reverse gyrase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Back     information, alignment and structure
>d1qdea_ c.37.1.19 (A:) Initiation factor 4a {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1gm5a3 c.37.1.19 (A:286-549) RecG helicase domain {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure