Citrus Sinensis ID: 043847

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-----
Protein Sequence
MAAKLVISLTLLSLFSLSYPLPDNSVSDAVEILSNSGYLSMALTLEFGSKFLTPPSPSLTIFSPSDSAFASFGQPSLALLQLHFSPLSFPSTFMKTLPYHAKIPTMSPNHTLIVTSLPSDDQVSLNGVKINQPEIYDDGSLRIFGIETFLDPDYSVSESQDGADPDLTLGQSVECLESVRGSEMNFDDAVRYLTTEGYNVMASFLQLQLVGFKDQTVVLTVFAPPDEAFQGYFGNFSEYSSIFLRHVVPCKISYQDLIDFDQGTVLPTFLEGFKINVTKSLKDLYLNNVRVNDPSLYLNDWMFIHGVEKIVPEYVPQSSQIGSSM
Secondary Structure (PSIPRED)
cHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHccHHHHHHHHHHcccccccccccEEEEccccHHHHccccccHHHHHHHHccccccHHHHccccccccccccccccEEEEEEccccccEEEcEEEEEcccccccccEEEEcccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHccHHHHHHHHHHHHHccccccccEEEEccccHHHHcccccHHHHHHHHHHcccccEEEcccccccccccccccccccEEEEEEEcccEEEEccEEEEccccEEcccEEEEEEcccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHcccHHHHHHHHHccHHcccccccEEEEcccHHHHHccccccHHHHHEEEccccccHHHHHHcccccEccccccccEEEEEEcccccEEEEccEEEEccccccccEEEEEEEcccccccccccccccccccccccccccccccccccccccHHHHHHHHHHccHHHHHHHHHHHHHHHHcccccEEEEcccHHHHHHHccccHHHHHHHHHHEccccccHHHHHccccccEccccccccEEEEEEcccEEEEccEEEEcccEEEccEEEEEccccccccccccHHcccccc
Coil and Loop (DISEMBL)
MAAKLVISLTLLSLFslsyplpdnsvsDAVEILSNSGYLSMALTLEfgskfltppspsltifspsdsafasfgqpsLALLQlhfsplsfpstfmktlpyhakiptmspnhtlivtslpsddqvslngvkinqpeiyddgslrifgietfldpdysvsesqdgadpdltlgqsVECLEsvrgsemnfDDAVRYLTTEGYNVMASFLQLQlvgfkdqtvvltvfappdeafqgyfgnfsEYSSIFLRHvvpckisyqdlidfdqgtvlptflegFKINVTKSLKDLylnnvrvndpslylndwMFIHGVekivpeyvpqssqigssm
Flexible Loop (DISEMBL)
MAAKLVISLTLLSLFSLSYPLPDNSVSDAVEILSNSGYLSMALTLEFGSKFLTPPSPSLTIFSPSDSAFASFGQPSLALLQLHFSPLSFPSTFMKTLPYHAKIPTMSPNHTLIVTSLPSDDQVSLNGVkinqpeiyddgSLRIFGIETFLDPDYSVSESQDGADPDLTLGQSVECLEsvrgsemnfDDAVRYLTTEGYNVMASFLQLQLVGFKDQTVVLTVFAPPDEAFQGYFGNFSEYSSIFLRHVVPCKISYQDLIDFDQGTVLPTFLEGFKINVTKSLKDLYLNNVRVNDPSLYLNDWMFIHGVEKIVPeyvpqssqigssm
Low Complexity Region (SEG)
MAAKlvisltllslfslsyplPDNSVSDAVEILSNSGYLSMALTLEFGSKFLTPPSPSLTIFSPSDSAFASFGQPSLALLQLHFSPLSFPSTFMKTLPYHAKIPTMSPNHTLIVTSLPSDDQVSLNGVKINQPEIYDDGSLRIFGIETFLDPDYSVSESQDGADPDLTLGQSVECLESVRGSEMNFDDAVRYLTTEGYNVMASFLQLQLVGFKDQTVVLTVFAPPDEAFQGYFGNFSEYSSIFLRHVVPCKISYQDLIDFDQGTVLPTFLEGFKINVTKSLKDLYLNNVRVNDPSLYLNDWMFIHGVEKIVPEYVPQSSQIGSSM
Disordered region (IsUnstruct)
****LVISLTLLSLFSLSYPLPDNSVSDAVEILSNSGYLSMALTLEFGSKFLTP****LTIF*****AFASFGQPSLALLQLHFSPLSFPSTFMKTLPYHAKIPTMSPNHTLIVTSLPSDDQVSLNGVKINQPEIYDDGSLRIFGIETFLDPDY*****************SVECLESVRGSEMNFDDAVRYLTTEGYNVMASFLQLQLVGFKDQTVVLTVFAPPDEAFQGYFGNFSEYSSIFLRHVVPCKISYQDLIDFDQGTVLPTFLEGFKINVTKSLKDLYLNNVRVNDPSLYLNDWMFIHGVEKIVPEYV**********
Disordered Region (DISOPRED)
***KLVISLTLLSLFSLSYPLPDNSVSDAVEILSNSGYLSMALTLEFGSKFLTPPSPSLTIFSPSDSAFASFGQPSLALLQLHFSPLSFPSTFMKTLPYHAKIPTMSPNHTLIVTSLPSDDQVSLNGVKINQPEIYDDGSLRIFGIETFLDPDYS************T***********RGSEMNFDDAVRYLTTEGYNVMASFLQLQLVGFKDQTVVLTVFAPPDEAFQGYFGNFSEYSSIFLRHVVPCKISYQDLIDFDQGTVLPTFLEGFKINVTKSLKDLYLNNVRVNDPSLYLNDWMFIHGVEKIV**************
Disordered Region (DISEMBL)
MAAKLVISLTLLSLFSLSYPLPDNSVSDAVEILSNSGYLSMALTLEFGSKFLTPPSPSLTIFSPSDSAFASFGQPSLALLQLHFSPLSFPSTFMKTLPYHAKIPTMSPNHTLIVTSLPSDDQVSLNGVKINQPEIYDDGSLRIFGIETFLDPDYSVSESQDGADPDLTLGQSVECLESVRGSEMNFDDAVRYLTTEGYNVMASFLQLQLVGFKDQTVVLTVFAPPDEAFQGYFGNFSEYSSIFLRHVVPCKISYQDLIDFDQGTVLPTFLEGFKINVTKSLKDLYLNNVRVNDPSLYLNDWMFIHGVEKIVPEYVP*********
Disordered Region (DISPRO)
MAAKLVISLTLLSLFSLSYPLPDNSVSDAVEILSNSGYLSMALTLEFGSKFLTPPSPSLTIFSPSDSAFASFGQPSLALLQLHFSPLSFPSTFMKTLPYHAKIPTMSPNHTLIVTSLPSDDQVSLNGVKINQPEIYDDGSLRIFGIETFLDPDYSVS**********************RGSEMNFDDAVRYLTTEGYNVMASFLQLQLVGFKDQTVVLTVFAPPDEAFQGYFGNFSEYSSIFLRHVVPCKISYQDLIDFDQGTVLPTFLEGFKINVTKSLKDLYLNNVRVNDPSLYLNDWMFIHGVEKIVPEYVP*********
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
SSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MAAKLVISLTLLSLFSLSYPLPDNSVSDAVEILSNSGYLSMALTLEFGSKFLTPPSPSLTIFSPSDSAFASFGQPSLALLQLHFSPLSFPSTFMKTLPYHAKIPTMSPNHTLIVTSLPSDDQVSLNGVKINQPEIYDDGSLRIFGIETFLDPDYSVSESQDGADPDLTLGQSVECLESVRGSEMNFDDAVRYLTTEGYNVMASFLQLQLVGFKDQTVVLTVFAPPDEAFQGYFGNFSEYSSIFLRHVVPCKISYQDLIDFDQGTVLPTFLEGFKINVTKSLKDLYLNNVRVNDPSLYLNDWMFIHGVEKIVPEYVPQSSQIGSSM
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	325	2.2.26 [Sep-21-2011]
Q9FGW0	424	Putative fasciclin-like a	yes	no	0.938	0.719	0.343	3e-38
Q9FL53	353	Fasciclin-like arabinogal	no	no	0.356	0.328	0.289	5e-06
Q5Q0H2	248	Fasciclin-like arabinogal	no	no	0.286	0.375	0.292	0.0001

>sp|Q9FGW0|FLA20_ARATH Putative fasciclin-like arabinogalactan protein 20 OS=Arabidopsis thaliana GN=FLA20 PE=3 SV=1

 Score =  159 bits (402), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 120/349 (34%), Positives = 183/349 (52%), Gaps = 44/349 (12%)

Query: 1   MAAKLVISLTLLSLFSLSYPLPDNS---VSDAVEILSNSGYLSMALTLEFGSKFLT-PPS 56
           MA+KL+ +  L+  F L   L   S   VS AVE+LS+SGYLSM LTL+  ++ L     
Sbjct: 42  MASKLLTTFFLI-FFVLDIDLVATSMTSVSSAVEVLSDSGYLSMGLTLKLANQDLNLEDW 100

Query: 57  PSLTIFSPSDSAFASFGQPSLALLQLHFSPLSFPSTFMKTLPYHAKIPTMSPNHTLIVTS 116
             LT+F+PSD +F+ FGQPSL  ++   SP   P   ++ LP  AKIPT+  N++L VT+
Sbjct: 101 QELTLFAPSDQSFSKFGQPSLLDMKYQLSPTRLPGETLRNLPNGAKIPTLRSNYSLTVTN 160

Query: 117 LPS-DDQVSLNGVKINQPEIYDDGSLRIFGIETFLDPDYSV------------------- 156
                 + S+N V +    ++DDG + I+G + F      +                   
Sbjct: 161 SSRFGGKTSINNVVVQDSPVFDDGYVVIYGSDEFFTSPTKISDDSSSSSSIPSTTSSTGS 220

Query: 157 -----SESQDGADPDLTLGQSVECLESVRGSEMN----FDDAVRYLTTEGYNVMASFLQL 207
                S +Q    P++    S   L + R   +N    F+ A R L + G+ ++A+FL L
Sbjct: 221 IPIPSSATQTPPSPNIA-SDSTRNLPN-RSKPVNRFNIFESASRLLMSRGFVIIATFLAL 278

Query: 208 QLVGFKDQT----VVLTVFAPPDEAFQGYFGNFSEYSSIFLRHVVPCKISYQDLIDF-DQ 262
           QL   +D T      +TVFAP DEA       FS+Y +IF  HVV   + ++DL  F  +
Sbjct: 279 QL---EDNTSGNDTKITVFAPIDEAIPNPTTKFSDYVTIFRGHVVSQLLLWKDLQKFAKE 335

Query: 263 GTVLPTFLEGFKINVTKSLKDLYLNNVRVNDPSLYLNDWMFIHGVEKIV 311
           G++L T L+G++I ++ S   L LN V +  P LY+NDW+ +HG  +++
Sbjct: 336 GSILQTVLKGYEIEISLSGDILLLNGVPLIYPDLYVNDWIAVHGFNQMI 384

May be a cell surface adhesion protein.
Arabidopsis thaliana (taxid: 3702)

>sp|Q9FL53|FLA21_ARATH Fasciclin-like arabinogalactan protein 21 OS=Arabidopsis thaliana GN=FLA21 PE=2 SV=1

 Score = 52.4 bits (124), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 37/128 (28%), Positives = 59/128 (46%), Gaps = 12/128 (9%)

Query: 188 DAVRYLTTEGYNVMASFLQLQLVGFKDQTVVLTVFAPPDEAFQGYFGNFSEYSSIFLR-- 245
           +A   L    +  +A+ L +    F   +   T+FA  D +F     N S    +FL+  
Sbjct: 51  NASNTLRQSNFKAIATLLHISPEIFLSSSPNTTLFAIEDASF----FNTSSLHPLFLKQL 106

Query: 246 ---HVVPCKISYQDLIDFDQGTVLPTFLEGFKIN---VTKSLKDLYLNNVRVNDPSLYLN 299
              H +P  +S  DL+   QGT LPT L    +    V +  +   +N+VR+  P ++L 
Sbjct: 107 LHYHTLPLMLSMDDLLKKPQGTCLPTLLHHKSVQISTVNQESRTAEVNHVRITHPDMFLG 166

Query: 300 DWMFIHGV 307
           D + IHGV
Sbjct: 167 DSLVIHGV 174

May be a cell surface adhesion protein.

Arabidopsis thaliana (taxid: 3702)

>sp|Q5Q0H2|FLA19_ARATH Fasciclin-like arabinogalactan protein 19 OS=Arabidopsis thaliana GN=FLA19 PE=2 SV=2

 Score = 47.4 bits (111), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 29/99 (29%), Positives = 55/99 (55%), Gaps = 6/99 (6%)

Query: 58  SLTIFSPSDSAFASFGQPS-----LALLQLHFSPLSFPSTFMKTLPYHAKIPTMSPNHTL 112
           SLT+F+P+DS              ++ L+LH  PL    + +++LP  + +PT+ P+H L
Sbjct: 68  SLTLFAPTDSMLFDLDMTHSLPFYVSTLRLHSVPLRLSLSGLRSLPNSSSLPTLLPSHRL 127

Query: 113 IVTSL-PSDDQVSLNGVKINQPEIYDDGSLRIFGIETFL 150
           ++T    S+D + L+GV++  P ++D   + + G+   L
Sbjct: 128 LLTKHSSSNDSIFLDGVQLLIPGLFDGQHIAVHGLADLL 166

May be a cell surface adhesion protein.

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	325
224101815	348	predicted protein [Populus trichocarpa]	0.858	0.801	0.533	2e-75
225424180	339	PREDICTED: putative fasciclin-like arabi	0.956	0.917	0.490	8e-70
255588116	339	hypothetical protein RCOM_0377590 [Ricin	0.944	0.905	0.473	1e-66
224099453	292	predicted protein [Populus trichocarpa]	0.781	0.869	0.477	4e-65
357444555	340	Fasciclin-like arabinogalactan protein [	0.898	0.858	0.454	3e-61
255580477	380	conserved hypothetical protein [Ricinus	0.963	0.823	0.455	2e-58
359472642	294	PREDICTED: LOW QUALITY PROTEIN: putative	0.864	0.955	0.449	9e-58
449517307	328	PREDICTED: putative fasciclin-like arabi	0.855	0.847	0.420	9e-57
224127404	352	fasciclin-like arabinogalactan protein [	0.901	0.832	0.429	6e-54
356574266	305	PREDICTED: putative fasciclin-like arabi	0.793	0.845	0.399	9e-51

>gi|224101815|ref|XP_002312431.1| predicted protein [Populus trichocarpa] gi|222852251|gb|EEE89798.1| predicted protein [Populus trichocarpa]

 Score =  289 bits (739), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 153/287 (53%), Positives = 199/287 (69%), Gaps = 8/287 (2%)

Query: 22  PDNSVSDAVEILSNSGYLSMALTLEFGSKF-LTPPSPSLTIFSPSDSAFASFGQPSLALL 80
           P  S+ DA +ILSNSGY++MAL LEFGS+  L PPS SLTIFSPSD+AF+  GQPSL LL
Sbjct: 23  PIYSILDATQILSNSGYVAMALILEFGSQTDLIPPSQSLTIFSPSDTAFSLSGQPSLDLL 82

Query: 81  QLHFSPLSFPSTFMKTLPYHAKIPTMSPNHTLIVTSLPSDDQVSLNGVKINQPEIYDDGS 140
             HF+P SF    +K+LP   +IPT+  NH+L+++S  +D Q S+NGVKIN   +YDDG 
Sbjct: 83  HFHFTPRSFSLNSLKSLPPGYQIPTLFSNHSLVISS-NADSQTSVNGVKINGSALYDDGF 141

Query: 141 LRIFGIETFLDPDYSVSESQDGADPDLTLGQSVECLESVRGSEMNFDDAVRYLTTEGYNV 200
           L IFG++ FLDPD++VS S +G+      G    C  +    + +F++A   L + GY+V
Sbjct: 142 LVIFGVDNFLDPDFTVSGSINGST-----GGIRGCYVTSGDDDCSFEEASGVLKSRGYSV 196

Query: 201 MASFLQLQLVGFKDQTVVLTVFAPPDEAFQGYFGNFSEYSSIFLRHVVPCKISYQDLIDF 260
           MASFL LQL  FKD T  LT+ AP DE  +G+ G+FS+Y SIFLRHVVPCKIS++DL+  
Sbjct: 197 MASFLDLQLAKFKDHTR-LTILAPVDEVLKGFMGDFSDYRSIFLRHVVPCKISWRDLVSL 255

Query: 261 DQGTVLPTFLEGFKINVTKSLKDLYLNNVRVNDPSLYLNDWMFIHGV 307
           D G VLPT+L GFKINVT S   L  N V+V  P +Y N W+ +HG+
Sbjct: 256 DDGVVLPTYLRGFKINVTVSSTFLMFNGVQVIVPEIYSNSWLTVHGL 302

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225424180|ref|XP_002280452.1| PREDICTED: putative fasciclin-like arabinogalactan protein 20-like [Vitis vinifera]

 Score =  270 bits (689), Expect = 8e-70,   Method: Compositional matrix adjust.
 Identities = 161/328 (49%), Positives = 212/328 (64%), Gaps = 17/328 (5%)

Query: 1   MAAKLVISLTLLSLFSLSYPLPDNSVSDAVEILSNSGYLSMALTLEFGSKFLTPPSPSLT 60
           MA  L+ SL +  LFSLS  LP  ++ DA EILS+SGY+SM+LTLE  S+ L P SPS T
Sbjct: 1   MAYSLLTSLIIFCLFSLSSSLPSQTILDAAEILSDSGYVSMSLTLELVSQTLLPKSPSAT 60

Query: 61  IFSPSDSAFASFGQPSLALLQLHFSPLSFPSTFMKTLPYHAKIPTMSPNHTLIVTSLPSD 120
           +F+ SD+AF   GQP L+LLQ H SPL+     +++LP  AKIPTM  NH+LIVTS  SD
Sbjct: 61  LFAASDAAFIESGQPPLSLLQFHSSPLALSFESLRSLPVGAKIPTMFANHSLIVTSAASD 120

Query: 121 DQVSLNGVKINQPEIYDDGSLRIFGIETFLD---PDYSVSESQDGADPDLTLGQSVECLE 177
            Q+SLN V I    ++DDGSL IFG++ F D   P   ++ S     P    G + + + 
Sbjct: 121 SQISLNNVNITSSPLFDDGSLIIFGVDKFFDLNFPALGLTRS-----PSPNTGCTDDAIA 175

Query: 178 SVRGSEMNFDDAVRYLTTEGYNVMASFLQLQLVGFKDQTVVLTVFAPPDEAFQGYFGNFS 237
           S  G   +FD+A   L + GY VMASFL LQL+GF+D T  +TV AP DE      GNFS
Sbjct: 176 SSGGD--SFDEASGVLRSRGYFVMASFLDLQLLGFRDGTK-MTVLAPADEVMMDRVGNFS 232

Query: 238 EYSS-IFLRHVVPCKISYQDLIDFDQGTVLPTFLEGFKINVTKSLKDLYLNNVRVNDPSL 296
           + SS IFLRHV+PCK+S+ DL++FD G++LPT LEGF IN+T+S   L LN V V  P +
Sbjct: 233 DISSSIFLRHVLPCKVSWSDLVNFDDGSMLPTSLEGFTINITRSGDTLKLNEVSVAFPDM 292

Query: 297 YLNDWMFIHGVEKIV-----PEYVPQSS 319
           Y +DW+ +HG+ +++     PE    SS
Sbjct: 293 YHSDWLVVHGLGEVLTLLVGPEQAADSS 320

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255588116|ref|XP_002534506.1| hypothetical protein RCOM_0377590 [Ricinus communis] gi|223525155|gb|EEF27876.1| hypothetical protein RCOM_0377590 [Ricinus communis]

 Score =  259 bits (662), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 152/321 (47%), Positives = 210/321 (65%), Gaps = 14/321 (4%)

Query: 1   MAAKL-VISLTLLSLF-----SLSYPLPDNSVSDAVEILSNSGYLSMALTLEF-GSKFLT 53
           MA K   + L +LS+F     S++  LP +++  A E+LSNSGYLSM+LTL+   S ++ 
Sbjct: 1   MATKTPTLILMILSVFFFFSISMTTSLPTSTLVRAAEMLSNSGYLSMSLTLQLISSTWII 60

Query: 54  PPSPSLTIFSPSDSAFASFGQPSLALLQLHFSPLSFPSTFMKTLPYHAKIPTMSPNHTLI 113
           P SPSLTIFSPSDSAFA  GQPSL+LLQ H  PLSF    ++ LP+ +KIPT+S N ++ 
Sbjct: 61  PHSPSLTIFSPSDSAFAQSGQPSLSLLQFHLCPLSFHLNSLRALPFGSKIPTLSSNLSIT 120

Query: 114 VTSLPSDDQVSLNGVKI-NQPEIYDDGSLRIFGIETFLDPDYSVSESQDGADPDLTLGQS 172
           + +   +  V LNGVKI   P  YDDGSL + G++ FLDPD+ VS +   +   +    +
Sbjct: 121 IVN-DDNGTVFLNGVKILGCP--YDDGSLVVLGVDKFLDPDFVVSLASPPSPVPVPSA-N 176

Query: 173 VECLESVRGSEMNFDDAVRYLTTEGYNVMASFLQLQLV-GFKD-QTVVLTVFAPPDEAFQ 230
           + C    +     F +A   L + G +VMASFL LQL+ GFK+ Q  +LTVFAP DE  +
Sbjct: 177 LACGSDFKNGVYLFKEATNVLRSNGCSVMASFLDLQLMSGFKEKQRPLLTVFAPLDEVMK 236

Query: 231 GYFGNFSEYSSIFLRHVVPCKISYQDLIDFDQGTVLPTFLEGFKINVTKSLKDLYLNNVR 290
           G+ G+  +YS IFLRHVVPCKI+++DL+DFD G V  TFLEGF I V++S   L LN V 
Sbjct: 237 GFIGDVDQYSLIFLRHVVPCKITWKDLVDFDDGMVFDTFLEGFGITVSRSGDILMLNEVP 296

Query: 291 VNDPSLYLNDWMFIHGVEKIV 311
           V+ P +Y N+W+ +HG+  ++
Sbjct: 297 VSFPDMYRNEWLVVHGLRGML 317

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224099453|ref|XP_002311490.1| predicted protein [Populus trichocarpa] gi|222851310|gb|EEE88857.1| predicted protein [Populus trichocarpa]

 Score =  254 bits (649), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 141/295 (47%), Positives = 186/295 (63%), Gaps = 41/295 (13%)

Query: 21  LPDNSVSDAVEILSNSGYLSMALTLEFGSKFLTPPSPSLTIFSPSDSAFASFGQPSLALL 80
           +P  ++ +A  ILSNSGYLSM+LTL   S  L P +PSLTIFSPSD+AF   GQP L++L
Sbjct: 23  IPTETLREAAVILSNSGYLSMSLTLPLVSNSLIPHTPSLTIFSPSDTAFTQSGQPPLSIL 82

Query: 81  QLHFSPLSFPSTFMKTLPYHAKIPTMSPNHTLIVTSLPSDDQVSLNGVKINQPEIYDDGS 140
           +LHFSPLSFP   +++L   AKIP++ PN++L +TS  + D VSLNGVKI    +YDDGS
Sbjct: 83  RLHFSPLSFPLNSLESLSLGAKIPSLFPNYSLTITS--TGDDVSLNGVKIKDSPVYDDGS 140

Query: 141 LRIFGIETFLDPDYSVSESQDGADPDLTLGQSVECLESVRGSEMNFDDAVRYLTTEGYNV 200
           L I G++ F D  + V                                    L ++GY+V
Sbjct: 141 LVILGVDRFFDTGFGV------------------------------------LNSKGYSV 164

Query: 201 MASFLQLQL-VGFKDQTVVLTVFAPPDEAFQGYFGNFSEYSSIFLRHVVPCKISYQDLID 259
           MASFL LQL VGF D+T  LT+FAP DE  + + G+  EYSS+FL+H VPCKI + DL++
Sbjct: 165 MASFLDLQLMVGFTDKTA-LTIFAPVDEVIKAFLGDLREYSSMFLKHAVPCKIMWGDLVN 223

Query: 260 FDQGTVLPTFLEGFKINVTKSLKDLYLNN-VRVNDPSLYLNDWMFIHGVEKIVPE 313
           FD G VL T+LEGF I V+ S  +L LN+   VN P +Y NDW+ IHG++ I+ E
Sbjct: 224 FDDGVVLETYLEGFGITVSTSGDNLMLNDQASVNFPDMYHNDWLVIHGLQSILKE 278

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357444555|ref|XP_003592555.1| Fasciclin-like arabinogalactan protein [Medicago truncatula] gi|355481603|gb|AES62806.1| Fasciclin-like arabinogalactan protein [Medicago truncatula]

 Score =  241 bits (615), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 134/295 (45%), Positives = 179/295 (60%), Gaps = 3/295 (1%)

Query: 21  LPDNSVSDAVEILSNSGYLSMALTLEFGSKFLTPPSPSLTIFSPSDSAFASFGQPSLALL 80
           LP  ++ DA +IL +SG++SM+LTLE  ++ L   S S T+F+PSDSAF   GQPSL LL
Sbjct: 23  LPRETIFDAADILLDSGFVSMSLTLEIVAESLLEQSHSATVFAPSDSAFKKSGQPSLDLL 82

Query: 81  QLHFSPLSFPSTFMKTLPYHAKIPTMSPNHTLIVTSLPSDDQVSLNGVKINQPEIYDDGS 140
           + HF  L  P   ++ LP  AK+PTM    +L VT+  SD   S+N +KIN   IYDDG 
Sbjct: 83  RFHFVMLPLPQQSLRRLPAGAKLPTMLTGQSLTVTTSFSDRVTSVNNIKINGTPIYDDGV 142

Query: 141 LRIFGIETFLDPDYSVSESQDGADPDLTLGQSVECLESVRGSEMNFDDAVRYLTTEGYNV 200
           L ++GI+ F DP++  +       P+     S   L     S  +F+ AV+ L T GY+V
Sbjct: 143 LLVYGIDRFFDPNFQYTGPS--RKPNSYSNSSCSALNRTVNSSGSFEQAVKTLKTSGYSV 200

Query: 201 MASFLQLQLVGFKDQTVVLTVFAPPDEAFQGYFGNFSEYSSIFLRHVVPCKISYQDLIDF 260
           MASFL +QL G  +Q  + TVFAP DE      G+F +Y S F RHVVPCK  + DL+DF
Sbjct: 201 MASFLGMQLSGNINQNGI-TVFAPTDEMVMNRIGDFEDYPSFFRRHVVPCKFLWNDLVDF 259

Query: 261 DQGTVLPTFLEGFKINVTKSLKDLYLNNVRVNDPSLYLNDWMFIHGVEKIVPEYV 315
             GT LPTFLEGF IN+T+S   L LN V V  P ++ ND + +HGV  ++   V
Sbjct: 260 GDGTQLPTFLEGFSINITRSGGVLILNGVPVFFPDVFFNDRLVVHGVTDVLANAV 314

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255580477|ref|XP_002531064.1| conserved hypothetical protein [Ricinus communis] gi|223529359|gb|EEF31325.1| conserved hypothetical protein [Ricinus communis]

 Score =  232 bits (591), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 155/340 (45%), Positives = 214/340 (62%), Gaps = 27/340 (7%)

Query: 1   MAAKLVISLTLLSLF-------SLSYPLPDNSVSDAVEILSNSGYLSMALTLEFGSK-FL 52
           M+ K ++ LTL S+        + S  LPDN    A+ +LS+SGY SMAL LEFGS+  L
Sbjct: 1   MSTKFLLFLTLFSILFICISTLTASGTLPDN----AITVLSDSGYNSMALILEFGSRSIL 56

Query: 53  TPPSPSLTIFSPSDSAFASFGQPSLALLQLHFSPLSFPSTFMKTLPYHAKIPTMSPNHTL 112
            PPSPSLTIFSPSD+ F+  GQPSL LLQ HFSPLS     +K+LP  +KI T   NH+L
Sbjct: 57  IPPSPSLTIFSPSDTVFSKSGQPSLNLLQFHFSPLSLSLHSLKSLPSGSKISTFWTNHSL 116

Query: 113 IVTSLPSDDQVSLNGVKINQPEIYDDGSLRIFGIETFLDPDYSVSESQDGADPDLTLGQS 172
           IVTS   +D+V +NGVK++   +YDDGSL IFGI+  LDP++ V +S     P L    +
Sbjct: 117 IVTS-DGEDKVEVNGVKVSGFPVYDDGSLVIFGIDKILDPNFQVLDSM--RPPPL---HN 170

Query: 173 VEC--LESVRGSEMN----FDDAVRYLTTEGYNVMASFLQLQLVGFKDQTVVLTVFAPPD 226
           ++C  L++     ++    F +A   L +  Y+VMASFL LQL  FKDQ + LT+FAP D
Sbjct: 171 LDCPALDANGDGHIDRGHSFKEASEVLRSREYSVMASFLDLQLTEFKDQ-MRLTIFAPTD 229

Query: 227 EAFQGYFGNFSEYSSIFLRHVVPCKISYQDLIDFDQ-GTVLPTFLEGFKINVTKSLKDLY 285
           ++ QG  G+ SEY SIFLRH VPC +S  +LI  +  G  L  +L+GF +NVT    ++ 
Sbjct: 230 KSVQGSLGHISEYKSIFLRHFVPCTLSMINLIGIESAGIQLLAYLDGFLVNVTTHGDNVR 289

Query: 286 LNNVRVNDPSLYLNDWMFIHGVE-KIVPEYVPQSSQIGSS 324
           +N V+V  P +Y N W+ +HG++  ++ E + Q +   SS
Sbjct: 290 VNGVQVIAPKIYNNSWLVVHGLDGSLIVEEMHQEAPHSSS 329

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359472642|ref|XP_003631181.1| PREDICTED: LOW QUALITY PROTEIN: putative fasciclin-like arabinogalactan protein 20-like [Vitis vinifera]

 Score =  229 bits (585), Expect = 9e-58,   Method: Compositional matrix adjust.
 Identities = 148/329 (44%), Positives = 191/329 (58%), Gaps = 48/329 (14%)

Query: 1   MAAKLVISLTLLSLFSLSYPLPDNSVSDAVEILSNSGYLSMALTLEFGSKFLTPPSPSLT 60
           MA  L+ SL +  LFSLS  LP  ++ DA EILS+SGY+SM+LTLE  S+ L P SPS T
Sbjct: 1   MAYSLLTSLIIFCLFSLSSSLPSQTILDAAEILSDSGYVSMSLTLELVSQTLLPKSPSAT 60

Query: 61  IFSPSDSAFASFGQPSLALLQLHFSPLSFPSTFMKTLPYHAKIPTMSPNHTLIVTSLPSD 120
           +F+ SD+AF   GQP L+LLQ H SPL+     + + P  AKIPTM  NH+LIVTS  SD
Sbjct: 61  LFAASDAAFIESGQPPLSLLQFHSSPLALSFESLSSPPVGAKIPTMFANHSLIVTSXASD 120

Query: 121 DQVSLNGVKINQPEIYDDGSLRIFGIETFLDPDYSVSESQDGADPDLTLGQS----VECL 176
            Q+SLN V I    ++DDGSL IFG++ F DP++          P L L +S      C 
Sbjct: 121 SQISLNNVNITSSPLFDDGSLIIFGVDKFFDPNF----------PALGLTRSPSPNAGCT 170

Query: 177 ESVRGSEMNFDDAVRYLTTEGYNVMASFLQLQLVGFKDQTVVLTVFAPPDEAFQGYFGNF 236
                     DDA+                    GF+D T V TV AP DE      GNF
Sbjct: 171 ----------DDAIAS-----------------SGFRDGTKV-TVLAPADEVMMDRVGNF 202

Query: 237 SEY-SSIFLRHVVPCKISYQDLIDFDQGTVLPTFLEGFKINVTKSLKDLYLNNVRVNDPS 295
           S   SSIFLRHV+PCK+S+ DL++FD G++LPT LEGF IN+ +S   L LN V V  P 
Sbjct: 203 SNISSSIFLRHVLPCKVSWSDLVNFDDGSMLPTSLEGFTINIIRSGDTLKLNEVSVAFPD 262

Query: 296 LYLNDWMFIHGVEKIV-----PEYVPQSS 319
           +Y +DW+ +HG+ +++     PE    SS
Sbjct: 263 MYYSDWLVVHGLGEVLTLLEGPEQAADSS 291

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449517307|ref|XP_004165687.1| PREDICTED: putative fasciclin-like arabinogalactan protein 20-like [Cucumis sativus]

 Score =  226 bits (577), Expect = 9e-57,   Method: Compositional matrix adjust.
 Identities = 124/295 (42%), Positives = 183/295 (62%), Gaps = 17/295 (5%)

Query: 20  PLPDNSVSDAVEILSNSGYLSMALTLEFGSKFLTPPSPSLTIFSPSDSAFASFGQPSLAL 79
           PL   +V DA EILSN+G++SMALTLE  +  L   S S+TIFSP D++F   GQPSL+L
Sbjct: 21  PLTSETVLDAAEILSNNGFVSMALTLELIADSLLSQSNSITIFSPPDTSFVQSGQPSLSL 80

Query: 80  LQLHFSPLSFPSTFMKTLPYHAKIPTMSPNHTLIVTSLPSDDQVSLNGVKINQPEIYDDG 139
           L+ HF PL   S  +++  +  KIPTM P+ +L VT+  SD  +SLN VK++    YDDG
Sbjct: 81  LRFHFLPLYLSSGSLRSFAFGTKIPTMLPSQSLTVTTPQSDSVISLNRVKVSSSPFYDDG 140

Query: 140 SLRIFGIETFLDPDYSVSESQDGADPDLTLGQSVEC-LESVRGSEMNFDDAVRYLTTEGY 198
            L ++GIE F D  +          P++       C L ++R     F +A+  L + GY
Sbjct: 141 LLVVYGIEKFFDLKFH--------SPNMKF----RCDLLTIRNP---FGEAIETLRSHGY 185

Query: 199 NVMASFLQLQLVGFKD-QTVVLTVFAPPDEAFQGYFGNFSEYSSIFLRHVVPCKISYQDL 257
           + MA FL+ Q++GF + Q+ ++TVFAP D+A +     F++Y S++ R + PC+IS+ DL
Sbjct: 186 SSMALFLESQILGFSNGQSSMMTVFAPSDDALETRVDKFTDYPSLYFRQISPCRISWNDL 245

Query: 258 IDFDQGTVLPTFLEGFKINVTKSLKDLYLNNVRVNDPSLYLNDWMFIHGVEKIVP 312
           +D + GT L T+ EG+ I VTKS   L +N V V  P++YLN+W+ +HG+  + P
Sbjct: 246 VDLEDGTELSTYSEGYTIYVTKSSGMLRINGVAVFYPNMYLNEWLVVHGLLDVFP 300

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224127404|ref|XP_002329269.1| fasciclin-like arabinogalactan protein [Populus trichocarpa] gi|222870723|gb|EEF07854.1| fasciclin-like arabinogalactan protein [Populus trichocarpa]

 Score =  217 bits (553), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 135/314 (42%), Positives = 181/314 (57%), Gaps = 21/314 (6%)

Query: 24  NSVSDAVEILSNSGYLSMALTLEFGSKFLTPPSPSLTIFSPSDSAFASFGQPSLALLQLH 83
           N  S+A+EILS SGYLSMALTLE  SK L   S + TIF+P D AFA  GQ S+  LQ H
Sbjct: 23  NPFSNAMEILSTSGYLSMALTLEITSKRLHLESSAATIFAPLDIAFARLGQLSVLDLQYH 82

Query: 84  FSPLSFPSTFMKTLPYHAKIPTMSPNHTLIVTSLPS--DDQVSLNGVKINQPEIYDDGSL 141
            SP+     ++ +LP+  +IPT+ PNH+LIVT+  S  D ++S+NG+ I +  + D GSL
Sbjct: 83  ISPVRLSGYYLDSLPFGTRIPTLLPNHSLIVTTSLSYFDGKLSINGISIEESALVDFGSL 142

Query: 142 RIFGIETFLDPDYSVSESQDGADPDLT-----LGQSVECLESVRGSEMN------FDDAV 190
            IFG+  F +    +S       P+LT         V  L +   +E        F  A 
Sbjct: 143 IIFGMSEFFNSSLEIS-------PNLTPAPAPSPSPVTSLGNTSQNESTGLDVDFFGQAS 195

Query: 191 RYLTTEGYNVMASFLQLQLVGFKDQTVVLTVFAPPDEAFQGYFGNFSEYSSIFLRHVVPC 250
             L   GY++M +FL  QL G K+QT  LT+FAP D+A   Y  N S+YSSIF +HVVP 
Sbjct: 196 HLLMPRGYSIMGTFLDAQLFGIKNQT-RLTIFAPVDQAMDAYAKNVSDYSSIFRKHVVPG 254

Query: 251 KISYQDLIDFDQGTVLPTFLEGFKINVTKSLKDLYLNNVRVNDPSLYLNDWMFIHGVEKI 310
               QDL  F+ GT LPTF  GF IN+TKS   L LN V V  P +Y +DW+ IHG+ ++
Sbjct: 255 LFPRQDLEGFNDGTSLPTFSGGFMINLTKSGDVLVLNGVPVIFPDMYQSDWLIIHGLNQL 314

Query: 311 VPEYVPQSSQIGSS 324
           +   + +   +G S
Sbjct: 315 LMPPLKEEELVGES 328

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356574266|ref|XP_003555271.1| PREDICTED: putative fasciclin-like arabinogalactan protein 20-like [Glycine max]

 Score =  206 bits (525), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 117/293 (39%), Positives = 163/293 (55%), Gaps = 35/293 (11%)

Query: 21  LPDNSVSDAVEILSNSGYLSMALTLEFGSKFLTPPSPSLTIFSPSDSAFASFGQPSLALL 80
           LP  ++ DA ++LS+SGY+SMALTLE  ++ L   SPS T+F+PSDSAF   GQPSL LL
Sbjct: 23  LPREAIFDASDVLSDSGYVSMALTLEIVAETLLEQSPSATVFAPSDSAFKKSGQPSLDLL 82

Query: 81  QLHFSPLSFPSTFMKTLPYHAKIPTMSPNHTLIVTSLPSDDQVSLNGVKINQPEIYDDGS 140
           + H +PL  P   ++ L   ++I TM P  TL VT+  SD   S N +K+    IYDDG 
Sbjct: 83  RFHLAPLPLPPASLRLLTAGSRIRTMLPGQTLTVTTSSSDGVTSFNNIKLTGSPIYDDGI 142

Query: 141 LRIFGIETFLDPDY--SVSESQDGADPDLTLGQSVECLESVRGSEMNFDDAVRYLTTEGY 198
           L ++GI+TF DP++  ++    D +D       S         +  +FD A++ L T GY
Sbjct: 143 LLVYGIDTFFDPNFQFNIQGPSDKSD------SSCSAKNHTATASDSFDQAIQTLKTGGY 196

Query: 199 NVMASFLQLQLVGFKDQTVVLTVFAPPDEAFQGYFGNFSEYSSIFLRHVVPCKISYQDLI 258
           + M                                G+F EY S F RHVVPC++ + DL+
Sbjct: 197 SDMV---------------------------MNRIGDFGEYPSFFRRHVVPCRLLWNDLV 229

Query: 259 DFDQGTVLPTFLEGFKINVTKSLKDLYLNNVRVNDPSLYLNDWMFIHGVEKIV 311
           DF  G+ LPTFLEGF IN+T+S   L LN VRV  P ++ ND + +HGV  ++
Sbjct: 230 DFGDGSELPTFLEGFAINITRSDGVLILNGVRVFFPDVFFNDRVVVHGVSDVL 282

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	325
TAIR|locus:2167742	424	FLA20 "AT5G40940" [Arabidopsis	0.443	0.339	0.398	7.2e-43
TAIR|locus:2037873	248	AT1G15190 "AT1G15190" [Arabido	0.286	0.375	0.313	4.6e-06
TAIR|locus:2169464	353	FLA21 "AT5G06920" [Arabidopsis	0.356	0.328	0.304	1.9e-05

TAIR|locus:2167742 FLA20 "AT5G40940" [Arabidopsis thaliana (taxid:3702)]

 Score = 259 (96.2 bits), Expect = 7.2e-43, Sum P(2) = 7.2e-43
 Identities = 59/148 (39%), Positives = 86/148 (58%)

Query:    25 SVSDAVEILSNSGYLSMALTLEFGSKFLTPPS-PSLTIFSPSDSAFASFGQPSLALLQLH 83
             SVS AVE+LS+SGYLSM LTL+  ++ L       LT+F+PSD +F+ FGQPSL  ++  
Sbjct:    68 SVSSAVEVLSDSGYLSMGLTLKLANQDLNLEDWQELTLFAPSDQSFSKFGQPSLLDMKYQ 127

Query:    84 FSPLSFPSTFMKTLPYHAKIPTMSPNHTLIVT-SLPSDDQVSLNGVKINQPEIYDDGSLR 142
              SP   P   ++ LP  AKIPT+  N++L VT S     + S+N V +    ++DDG + 
Sbjct:   128 LSPTRLPGETLRNLPNGAKIPTLRSNYSLTVTNSSRFGGKTSINNVVVQDSPVFDDGYVV 187

Query:   143 IFGIETFLDPDYSVSE--SQDGADPDLT 168
             I+G + F      +S+  S   + P  T
Sbjct:   188 IYGSDEFFTSPTKISDDSSSSSSIPSTT 215

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM

TAIR|locus:2037873 AT1G15190 "AT1G15190" [Arabidopsis thaliana (taxid:3702)]

 Score = 129 (50.5 bits), Expect = 4.6e-06, P = 4.6e-06
 Identities = 31/99 (31%), Positives = 56/99 (56%)

Query:    58 SLTIFSPSDSAFASFGQP-SL----ALLQLHFSPLSFPSTFMKTLPYHAKIPTMSPNHTL 112
             SLT+F+P+DS         SL    + L+LH  PL    + +++LP  + +PT+ P+H L
Sbjct:    68 SLTLFAPTDSMLFDLDMTHSLPFYVSTLRLHSVPLRLSLSGLRSLPNSSSLPTLLPSHRL 127

Query:   113 IVTS-LPSDDQVSLNGVKINQPEIYDDGSLRIFGIETFL 150
             ++T    S+D + L+GV++  P ++D   + + G+   L
Sbjct:   128 LLTKHSSSNDSIFLDGVQLLIPGLFDGQHIAVHGLADLL 166

GO:0003674 "molecular_function" evidence=ND

TAIR|locus:2169464 FLA21 "AT5G06920" [Arabidopsis thaliana (taxid:3702)]

 Score = 127 (49.8 bits), Expect = 1.9e-05, P = 1.9e-05
 Identities = 39/128 (30%), Positives = 63/128 (49%)

Query:   188 DAVRYLTTEGYNVMASFLQLQLVGFKDQTVVLTVFAPPDEAFQGYFGNFSEYSSIFLR-- 245
             +A   L    +  +A+ L +    F   +   T+FA  D +F   F N S    +FL+  
Sbjct:    51 NASNTLRQSNFKAIATLLHISPEIFLSSSPNTTLFAIEDASF---F-NTSSLHPLFLKQL 106

Query:   246 ---HVVPCKISYQDLIDFDQGTVLPTFL--EGFKIN-VTKSLKDLYLNNVRVNDPSLYLN 299
                H +P  +S  DL+   QGT LPT L  +  +I+ V +  +   +N+VR+  P ++L 
Sbjct:   107 LHYHTLPLMLSMDDLLKKPQGTCLPTLLHHKSVQISTVNQESRTAEVNHVRITHPDMFLG 166

Query:   300 DWMFIHGV 307
             D + IHGV
Sbjct:   167 DSLVIHGV 174


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.318   0.135   0.392    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      325       308   0.00078  116 3  11 22  0.41    34
                                                     33  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  3
  No. of states in DFA:  591 (63 KB)
  Total size of DFA:  193 KB (2110 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  25.32u 0.14s 25.46t   Elapsed:  00:00:01
  Total cpu time:  25.32u 0.14s 25.46t   Elapsed:  00:00:01
  Start:  Fri May 10 20:06:29 2013   End:  Fri May 10 20:06:30 2013

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM

GO:0006863 "purine nucleobase transport" evidence=RCA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: fgenesh4_pg.C_LG_VIII001144 hypothetical protein (348 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	325
pfam02469	123	pfam02469, Fasciclin, Fasciclin domain	7e-09
smart00554	97	smart00554, FAS1, Four repeated domains in the Fas	1e-06
smart00554	97	smart00554, FAS1, Four repeated domains in the Fas	4e-05

>gnl|CDD|217054 pfam02469, Fasciclin, Fasciclin domain

 Score = 53.0 bits (128), Expect = 7e-09
 Identities = 30/107 (28%), Positives = 47/107 (43%), Gaps = 22/107 (20%)

Query: 219 LTVFAPPDEAFQGY--------FGNFSEYSSIFLRHVVPCKISYQDLIDFDQGTVLPTFL 270
            TVFAP DEAF             +  +  ++   HVVP +++  DL +   G  L T L
Sbjct: 26  FTVFAPTDEAFAKLPAGTLNFLLKDKEQLKNLLKYHVVPGRLTSSDLKN---GGTLAT-L 81

Query: 271 EGFKINVTKSLKDLYLNNVRVNDPSLYLNDWMF----IHGVEK-IVP 312
           +G K+ V  +   + +N  RV        D       IH ++K ++P
Sbjct: 82  QGSKLRVNVTGGTVTVNGARVVQS-----DIEATNGVIHVIDKVLLP 123

This extracellular domain is found repeated four times in grasshopper fasciclin I as well as in proteins from mammals, sea urchins, plants, yeast and bacteria. Length = 123

>gnl|CDD|214719 smart00554, FAS1, Four repeated domains in the Fasciclin I family of proteins, present in many other contexts

 Score = 46.2 bits (110), Expect = 1e-06
 Identities = 30/98 (30%), Positives = 52/98 (53%), Gaps = 12/98 (12%)

Query: 220 TVFAPPDEAFQGY---FGNFSEYS--SIFLRHVVPCKISYQDLIDFDQGTVLPTFLEGFK 274
           TVFAP DEAFQ       +       ++ L HVVP ++S  DL++   G  LPT L G K
Sbjct: 1   TVFAPTDEAFQKLPPDLNSLLADKLKNLLLYHVVPGRLSSADLLN---GGTLPT-LAGSK 56

Query: 275 INVTKS--LKDLYLNNVRVNDPSLYLNDWMFIHGVEKI 310
           + +T+S     + +N  R+ +  +   + + +H ++++
Sbjct: 57  LRITRSGGSGTVTVNGARIVEADIAATNGV-VHVIDRV 93

Length = 97

>gnl|CDD|214719 smart00554, FAS1, Four repeated domains in the Fasciclin I family of proteins, present in many other contexts

 Score = 41.2 bits (97), Expect = 4e-05
 Identities = 23/101 (22%), Positives = 38/101 (37%), Gaps = 13/101 (12%)

Query: 60  TIFSPSDSAFASFGQP--------SLALLQLHFSPLSFPSTFMKTLPYHAKIPTMSPNHT 111
           T+F+P+D AF                 LL  H  P          L     +PT++    
Sbjct: 1   TVFAPTDEAFQKLPPDLNSLLADKLKNLLLYHVVPGRL---SSADLLNGGTLPTLA-GSK 56

Query: 112 LIVTSLPSDDQVSLNGVKINQPEIYDDGSLRIFGIETFLDP 152
           L +T       V++NG +I + +I     + +  I+  L P
Sbjct: 57  LRITRSGGSGTVTVNGARIVEADIAATNGV-VHVIDRVLLP 96

Length = 97

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	325
COG2335	187	Secreted and surface protein containing fasciclin-	99.9
smart00554	99	FAS1 Four repeated domains in the Fasciclin I fami	99.83
KOG1437	682	consensus Fasciclin and related adhesion glycoprot	99.81
PF02469	128	Fasciclin: Fasciclin domain; InterPro: IPR000782 T	99.79
COG2335	187	Secreted and surface protein containing fasciclin-	99.76
smart00554	99	FAS1 Four repeated domains in the Fasciclin I fami	99.71
PF02469	128	Fasciclin: Fasciclin domain; InterPro: IPR000782 T	99.67
KOG1437	682	consensus Fasciclin and related adhesion glycoprot	99.53

>COG2335 Secreted and surface protein containing fasciclin-like repeats [Cell envelope biogenesis, outer membrane]

Probab=99.90  E-value=6.4e-24  Score=184.03  Aligned_cols=127  Identities=24%  Similarity=0.304  Sum_probs=106.0

Q ss_pred             HHHHHHHHhhc-ChHHHHHHHHH-hhccccCCCceeEEEeCCCHHHhccCC----------ChhhHHhhhcccccCCccc
Q 043847          186 FDDAVRYLTTE-GYNVMASFLQL-QLVGFKDQTVVLTVFAPPDEAFQGYFG----------NFSEYSSIFLRHVVPCKIS  253 (325)
Q Consensus       186 ~~~~~~~L~~~-gf~~~~~~L~~-~~~~l~~~~~~~TvFAPtd~AF~~l~~----------~~~~l~~iL~yHvVp~~~~  253 (325)
                      -.++++..... .|+++..+++. .+-+.+..+||||||||+|+||++++.          +...++++|.||||+|++.
T Consensus        47 ~~~iV~~a~~~~~f~tl~~a~~aa~Lv~~L~~~gp~TVFaPtn~AFa~lp~~T~~~Ll~pen~~~L~~iLtYHVv~Gk~~  126 (187)
T COG2335          47 RADIVESAANNPSFTTLVAALKAAGLVDTLNETGPFTVFAPTNEAFAKLPAGTLDALLKPENKPLLTKILTYHVVEGKIT  126 (187)
T ss_pred             hhHHHHHHccCcchHHHHHHHHhhhhHHHhcCCCCeEEecCCHHHHHhCChhHHHHHhCccchhhhheeeEEEEEcCccc
Confidence            35677776444 49999988854 456777778889999999999999863          4567889999999999999


Q ss_pred             hhcccccCCCceeeeccCCcEEEEEEeCCeEEEeeEEEecCccccCCCeEEEEeCCccCCCCCC
Q 043847          254 YQDLIDFDQGTVLPTFLEGFKINVTKSLKDLYLNNVRVNDPSLYLNDWMFIHGVEKIVPEYVPQ  317 (325)
Q Consensus       254 ~~~L~~~~~g~~l~Tl~~g~~l~v~~~~~~v~vng~~V~~~di~~~~ngvIH~Id~VL~P~~~~  317 (325)
                      .+++.+   ...+.|+ +|..++|...+++++||.++|+.+|+ ..+|||||+||+||+||...
T Consensus       127 ~~~l~~---~~~v~t~-~G~~~~i~~~~~~~~Vn~a~v~~~di-~a~NgvIhvID~Vl~Pp~~~  185 (187)
T COG2335         127 AADLKS---SGSVKTV-QGADLKIKVTGGGVYVNDATVTIADI-NASNGVIHVIDKVLIPPMDL  185 (187)
T ss_pred             HHHhhc---cccceee-cCceEEEEEcCCcEEEeeeEEEeccE-eccCcEEEEEeeeccCCCcc
Confidence            999875   2347776 89999999988889999999999995 57899999999999999753

>smart00554 FAS1 Four repeated domains in the Fasciclin I family of proteins, present in many other contexts

Probab=99.83  E-value=1.3e-20  Score=149.16  Aligned_cols=90  Identities=33%  Similarity=0.523  Sum_probs=77.9

Q ss_pred             EEEeCCCHHHhccCCC------hh-hHHhhhcccccCCccchhcccccCCCceeeeccCCcEEEEEEeC--CeEEEeeEE
Q 043847          220 TVFAPPDEAFQGYFGN------FS-EYSSIFLRHVVPCKISYQDLIDFDQGTVLPTFLEGFKINVTKSL--KDLYLNNVR  290 (325)
Q Consensus       220 TvFAPtd~AF~~l~~~------~~-~l~~iL~yHvVp~~~~~~~L~~~~~g~~l~Tl~~g~~l~v~~~~--~~v~vng~~  290 (325)
                      |+|||+|+||+++..+      .+ .++++|+||++|++++.++|.+   +..++|+ .|+.++++..+  +.+++|+++
T Consensus         1 TvfaP~d~Af~~~~~~~~~~l~~~~~l~~ll~~Hiv~~~~~~~~l~~---~~~~~Tl-~g~~l~v~~~~~~~~i~in~~~   76 (99)
T smart00554        1 TVFAPTDEAFQKLPPGTLNSLLADPKLKNLLLYHVVPGRLSSADLLN---GGTLPTL-AGSKLRVTRSGDSGTVTVNGAR   76 (99)
T ss_pred             CEeCcCHHHHHhcCHHHHHHHhCCHHHHHHHHhcEeCceEcHHHhcc---CCccccC-CCCEEEEEEeCCCCeEEEcceE
Confidence            8999999999988532      11 6789999999999999998864   6778997 69999998877  799999999


Q ss_pred             EecCccccCCCeEEEEeCCccCCC
Q 043847          291 VNDPSLYLNDWMFIHGVEKIVPEY  314 (325)
Q Consensus       291 V~~~di~~~~ngvIH~Id~VL~P~  314 (325)
                      |+.+|+. ++||+||+||+||+|+
T Consensus        77 v~~~di~-~~nGvih~Id~vL~P~   99 (99)
T smart00554       77 IVEADIA-ATNGVVHVIDRVLLPP   99 (99)
T ss_pred             EEECCEe-cCCeEEEEECceeCCC
Confidence            9999976 5689999999999996

>KOG1437 consensus Fasciclin and related adhesion glycoproteins [Cell wall/membrane/envelope biogenesis; Extracellular structures]

Probab=99.81  E-value=3.4e-19  Score=181.18  Aligned_cols=249  Identities=16%  Similarity=0.157  Sum_probs=162.5

Q ss_pred             chhcHHHHHHhCCchhHHHHHhhcccc-CCCCCCCeEEEeeCcHHHhcCCC-Cc----HHHhhhcccCCccccccccCCC
Q 043847           25 SVSDAVEILSNSGYLSMALTLEFGSKF-LTPPSPSLTIFSPSDSAFASFGQ-PS----LALLQLHFSPLSFPSTFMKTLP   98 (325)
Q Consensus        25 ~~~ni~~iL~~~g~~s~~~~l~~~~~~-~l~~~~~~TvFAPtd~Af~~~~~-~~----l~lL~yHvv~g~~~~~~L~~~~   98 (325)
                      +..++.++..+....++..++...+.. .+...+.+|+|+|+|+||++... ..    .++|.||+++.+...+++... 
T Consensus       372 ~~~~l~~La~e~~~st~~rlv~elgll~~L~~n~e~t~~lp~n~~fd~~~~~~~r~l~~qIL~~HII~~~~~~~~~y~~-  450 (682)
T KOG1437|consen  372 SLKNLMSLAREDEISTSMRLVAELGLLTALAPNDEATLLLPTNNLFDDLTPLESRRLAEQILYNHIIPEYLTSSSMYNG-  450 (682)
T ss_pred             hHHHHHHHHhcccccHHHHHHHhccceEEEcCCCceEEeeehhhhccCCChhhhHHHHHHHHHHhCcchhhhhhhhhcc-
Confidence            356778878887777777766554433 34444559999999999998532 22    399999999999999998852 


Q ss_pred             CCCeeecccCCceEEEEEcCC-----CCeEEEcc-EEEecCccc-cCCCeEEEEeCCccCCCccccccCCCCCCCCccCC
Q 043847           99 YHAKIPTMSPNHTLIVTSLPS-----DDQVSLNG-VKINQPEIY-DDGSLRIFGIETFLDPDYSVSESQDGADPDLTLGQ  171 (325)
Q Consensus        99 ~g~~l~Tll~g~~l~vt~~~~-----~~~v~vng-~~I~~~di~-~~G~~vvH~Id~vL~P~~~~~~~~~~~~p~~~~~~  171 (325)
                       ++.++|+ .|..+..-.+..     ...+.++| +.|.+.|+. .||  ++|+||+|+.| ..                
T Consensus       451 -~~~v~t~-g~~~l~~fv~r~~~s~~~t~i~~~~~~~Ii~aDi~~~nG--vvH~id~vl~p-~~----------------  509 (682)
T KOG1437|consen  451 -QTTVRTL-GKNKLLYFVYRHSVSANVTDILIGNEACIIEADISVKNG--VVHIIDRVLDP-VS----------------  509 (682)
T ss_pred             -cceeecc-CCeEEEEEEecccccccceeeeccceeeEEecccceecC--ceEEeeEEcCc-cc----------------
Confidence             2366665 555554444321     11345555 467788985 688  99999999998 22                


Q ss_pred             chhhhhcccCCCCcHHHHHHHHhhcC-hHHHHHHHHHh-hc-cccCCCceeEEEeCCCHHHhccCC------ChhhHHhh
Q 043847          172 SVECLESVRGSEMNFDDAVRYLTTEG-YNVMASFLQLQ-LV-GFKDQTVVLTVFAPPDEAFQGYFG------NFSEYSSI  242 (325)
Q Consensus       172 p~~~~a~~~~~~~~~~~~~~~L~~~g-f~~~~~~L~~~-~~-~l~~~~~~~TvFAPtd~AF~~l~~------~~~~l~~i  242 (325)
                                       .++.|++.+ ++.+..+++.. +. .+....+ +|+|+|||+||++...      +...+.++
T Consensus       510 -----------------l~~~l~~d~r~s~~~~~le~~~l~e~l~~~~~-~t~fvPt~ka~~~~~~~~~~~~~~~~l~~~  571 (682)
T KOG1437|consen  510 -----------------LMEDLKTDGRISGTVQGLEGVLLPEELTPEGN-YTLFVPTNKAWQKSTKDEKSLFHKKALQDF  571 (682)
T ss_pred             -----------------HHHHHhhccchhhhHHhhhhcCChhhhccCCc-eEEEeecccccccCCcchhhcchHHHHHHH
Confidence                             112222222 44444444332 22 3333344 9999999999987653      33568899


Q ss_pred             hcccccCCccc--hhcccccCCCceeeeccCCcEEEEEEeCCeEEEeeEEEecCccccCCCeEEEEeCCccCCCCC
Q 043847          243 FLRHVVPCKIS--YQDLIDFDQGTVLPTFLEGFKINVTKSLKDLYLNNVRVNDPSLYLNDWMFIHGVEKIVPEYVP  316 (325)
Q Consensus       243 L~yHvVp~~~~--~~~L~~~~~g~~l~Tl~~g~~l~v~~~~~~v~vng~~V~~~di~~~~ngvIH~Id~VL~P~~~  316 (325)
                      +.||++++...  ..+......+ ..-+. .|..+.+........+|..+++..|++ ..||++|+||.|+.|++.
T Consensus       572 l~yH~v~~~~~ls~~~~~~v~~~-~k~s~-~~~~~~~~~~~~~~~vn~e~~~~~~i~-~~n~~~h~i~~vl~p~~l  644 (682)
T KOG1437|consen  572 LKYHLVPGQSRLSLGSSPYVMIQ-VKLSL-RGDHLFFSLVNPRGDVNKERLVGIDIM-GTNGVVHVIDLVLKPPDL  644 (682)
T ss_pred             HHhccccceeeeecccccceeee-eeEEE-ecccEEeeeeccccceeeeeeecccee-eecceeEEEEEEcccCcc
Confidence            99999999653  1111100000 11121 344555555556777888999999976 568999999999999843

>PF02469 Fasciclin: Fasciclin domain; InterPro: IPR000782 The FAS1 (fasciclin-like) domain is an extracellular module of about 140 amino acid residues

Probab=99.79  E-value=1.4e-19  Score=149.38  Aligned_cols=113  Identities=27%  Similarity=0.387  Sum_probs=83.4

Q ss_pred             hHHHHHHHHH-hhcccc-CCCceeEEEeCCCHHHhccC--------CChhhHHhhhcccccCCccchhcccccCCCceee
Q 043847          198 YNVMASFLQL-QLVGFK-DQTVVLTVFAPPDEAFQGYF--------GNFSEYSSIFLRHVVPCKISYQDLIDFDQGTVLP  267 (325)
Q Consensus       198 f~~~~~~L~~-~~~~l~-~~~~~~TvFAPtd~AF~~l~--------~~~~~l~~iL~yHvVp~~~~~~~L~~~~~g~~l~  267 (325)
                      |+.|..+++. .+...+ +..+.+|+|||+|+||+++.        .+.+.++++|+||++++.++.++++..  ++.++
T Consensus         3 ~s~f~~~l~~~~l~~~l~~~~~~~TvfaP~d~a~~~~~~~~~~~~~~~~~~l~~~l~~hiv~~~~~~~~l~~~--~~~~~   80 (128)
T PF02469_consen    3 LSTFSRLLEQAGLADLLNDSDGNYTVFAPTDDAFQKLSQETNSSLADSKEQLKSLLKYHIVPGSITSSDLRNG--KQTLE   80 (128)
T ss_dssp             THHHHHHHHHTTCHHHHGCSSSSEEEEEE-HHHHHHSHHHHHHHHHTHHHHHHHHHHHTEEES---HCHHHCH--HEEEE
T ss_pred             HHHHHHHHHHcCCHHHHhcCCCCEEEEEECHHHHHhccccccchhhhhhhhHhhhhhhEEEcCceehhhhccc--cccce
Confidence            5555555542 233333 44455999999999998773        134568999999999999988887642  15788


Q ss_pred             eccCCcEEEEEEe--CCeEEEee-EEEecCccccCCCeEEEEeCCccCC
Q 043847          268 TFLEGFKINVTKS--LKDLYLNN-VRVNDPSLYLNDWMFIHGVEKIVPE  313 (325)
Q Consensus       268 Tl~~g~~l~v~~~--~~~v~vng-~~V~~~di~~~~ngvIH~Id~VL~P  313 (325)
                      |...|..+.|+..  ++.++||+ ++|+..|+. ++||+||+||+||.|
T Consensus        81 t~~~g~~~~v~~~~~~~~~~v~~~a~i~~~~~~-~~nG~ih~id~vL~P  128 (128)
T PF02469_consen   81 TLLNGQPLRVSSSPSNGTIYVNGKARIVKSDIE-ASNGVIHIIDDVLIP  128 (128)
T ss_dssp             BSSTTCEEEEEEEGGTTEEEECCEEEESEEEEE-ESSEEEEEESS-TSS
T ss_pred             eccCCCEEEEEEEecCCceEecCceEEEeCCEE-eCCEEEEEECceECc
Confidence            8558999999876  78999999 999999975 578999999999998

It has been suggested that the FAS1 domain represents an ancient cell adhesion domain common to plants and animals []; related FAS1 domains are also found in bacteria []. The crystal structure of FAS1 domains 3 and 4 of fasciclin I from Drosophila melanogaster (Fruit fly) has been determined, revealing a novel domain fold consisting of a seven-stranded beta wedge and at least five alpha helices; two well-ordered N-acetylglucosamine groups attached to a conserved asparagine are located in the interface region between the two FAS1 domains []. Fasciclin I is an insect neural cell adhesion molecule involved in axonal guidance that is attached to the membrane by a GPI-anchored protein. FAS1 domains are present in many secreted and membrane-anchored proteins. These proteins are usually GPI anchored and consist of: (i) a single FAS1 domain, (ii) a tandem array of FAS1 domains, or (iii) FAS1 domain(s) interspersed with other domains. Proteins known to contain a FAS1 domain include: Fasciclin I (4 FAS1 domains). Human TGF-beta induced Ig-H3 (BIgH3) protein (4 FAS1 domains), where the FAS1 domains mediate cell adhesion through an interaction with alpha3/beta1 integrin; mutation in the FAS1 domains result in corneal dystrophy []. Volvox major cell adhesion protein (2 FAS1 domains) []. Arabidopsis fasciclin-like arabinogalactan proteins (2 FAS1 domains) []. Mammalian stabilin protein, a family of fasciclin-like hyaluronan receptor homologues (7 FAS1 domains)[]. Human extracellular matrix protein periostin (4 FAS1 domains). Bacterial immunogenic protein MPT70 (1 FAS1 domain) []. The FAS1 domains of both human periostin (Q15063 from SWISSPROT) and BIgH3 (Q15582 from SWISSPROT) proteins were found to contain vitamin K-dependent gamma-carboxyglutamate residues []. Gamma-carboxyglutamate residues are more commonly associated with GLA domains (IPR000294 from INTERPRO), where they occur through post-translational modification catalysed by the vitamin K-dependent enzyme gamma-glutamylcarboxylase.; PDB: 1O70_A 1W7D_A 1W7E_A 1NYO_A 1X3B_A 2VXP_A.

>COG2335 Secreted and surface protein containing fasciclin-like repeats [Cell envelope biogenesis, outer membrane]

Probab=99.76  E-value=1.1e-18  Score=151.46  Aligned_cols=123  Identities=21%  Similarity=0.333  Sum_probs=96.6

Q ss_pred             chhcHHHHHHhCC-chhHHHHHhhcccc-CCCCCCCeEEEeeCcHHHhcCCC--------Cc----H-HHhhhcccCCcc
Q 043847           25 SVSDAVEILSNSG-YLSMALTLEFGSKF-LTPPSPSLTIFSPSDSAFASFGQ--------PS----L-ALLQLHFSPLSF   89 (325)
Q Consensus        25 ~~~ni~~iL~~~g-~~s~~~~l~~~~~~-~l~~~~~~TvFAPtd~Af~~~~~--------~~----l-~lL~yHvv~g~~   89 (325)
                      .-.++.+.-.+++ |..+..+++.++.. .+...|+||||||+|+||.+++.        |+    + .+|.|||++|++
T Consensus        46 ~~~~iV~~a~~~~~f~tl~~a~~aa~Lv~~L~~~gp~TVFaPtn~AFa~lp~~T~~~Ll~pen~~~L~~iLtYHVv~Gk~  125 (187)
T COG2335          46 NRADIVESAANNPSFTTLVAALKAAGLVDTLNETGPFTVFAPTNEAFAKLPAGTLDALLKPENKPLLTKILTYHVVEGKI  125 (187)
T ss_pred             chhHHHHHHccCcchHHHHHHHHhhhhHHHhcCCCCeEEecCCHHHHHhCChhHHHHHhCccchhhhheeeEEEEEcCcc
Confidence            4467777665554 66677777765533 45667999999999999999863        22    1 899999999999


Q ss_pred             ccccccCCCCCCeeecccCCceEEEEEcCCCCeEEEccEEEecCccc-cCCCeEEEEeCCccCCCcc
Q 043847           90 PSTFMKTLPYHAKIPTMSPNHTLIVTSLPSDDQVSLNGVKINQPEIY-DDGSLRIFGIETFLDPDYS  155 (325)
Q Consensus        90 ~~~~L~~~~~g~~l~Tll~g~~l~vt~~~~~~~v~vng~~I~~~di~-~~G~~vvH~Id~vL~P~~~  155 (325)
                      +.++++..   ..+.| +.|..++|...  +++++||.++++..|+. +||  +||+||+||.||..
T Consensus       126 ~~~~l~~~---~~v~t-~~G~~~~i~~~--~~~~~Vn~a~v~~~di~a~Ng--vIhvID~Vl~Pp~~  184 (187)
T COG2335         126 TAADLKSS---GSVKT-VQGADLKIKVT--GGGVYVNDATVTIADINASNG--VIHVIDKVLIPPMD  184 (187)
T ss_pred             cHHHhhcc---cccee-ecCceEEEEEc--CCcEEEeeeEEEeccEeccCc--EEEEEeeeccCCCc
Confidence            99999863   34556 57999999886  34599999999999985 677  99999999999854

>smart00554 FAS1 Four repeated domains in the Fasciclin I family of proteins, present in many other contexts

Probab=99.71  E-value=1.5e-17  Score=131.50  Aligned_cols=88  Identities=30%  Similarity=0.471  Sum_probs=74.2

Q ss_pred             EEEeeCcHHHhcCCCC---------cH-HHhhhcccCCccccccccCCCCCCeeecccCCceEEEEEcCCCCeEEEccEE
Q 043847           60 TIFSPSDSAFASFGQP---------SL-ALLQLHFSPLSFPSTFMKTLPYHAKIPTMSPNHTLIVTSLPSDDQVSLNGVK  129 (325)
Q Consensus        60 TvFAPtd~Af~~~~~~---------~l-~lL~yHvv~g~~~~~~L~~~~~g~~l~Tll~g~~l~vt~~~~~~~v~vng~~  129 (325)
                      |+|||+|+||++++..         .+ ++|+||++++++..++|..   +..++|+ .|..++++..++.+.+++|+++
T Consensus         1 TvfaP~d~Af~~~~~~~~~~l~~~~~l~~ll~~Hiv~~~~~~~~l~~---~~~~~Tl-~g~~l~v~~~~~~~~i~in~~~   76 (99)
T smart00554        1 TVFAPTDEAFQKLPPGTLNSLLADPKLKNLLLYHVVPGRLSSADLLN---GGTLPTL-AGSKLRVTRSGDSGTVTVNGAR   76 (99)
T ss_pred             CEeCcCHHHHHhcCHHHHHHHhCCHHHHHHHHhcEeCceEcHHHhcc---CCccccC-CCCEEEEEEeCCCCeEEEcceE
Confidence            8999999999998531         22 8999999999999999985   5678886 4899999987432689999999


Q ss_pred             EecCccc-cCCCeEEEEeCCccCCC
Q 043847          130 INQPEIY-DDGSLRIFGIETFLDPD  153 (325)
Q Consensus       130 I~~~di~-~~G~~vvH~Id~vL~P~  153 (325)
                      |+++|+. .||  +||+||+||.|+
T Consensus        77 v~~~di~~~nG--vih~Id~vL~P~   99 (99)
T smart00554       77 IVEADIAATNG--VVHVIDRVLLPP   99 (99)
T ss_pred             EEECCEecCCe--EEEEECceeCCC
Confidence            9999997 455  999999999985

>PF02469 Fasciclin: Fasciclin domain; InterPro: IPR000782 The FAS1 (fasciclin-like) domain is an extracellular module of about 140 amino acid residues

Probab=99.67  E-value=3.9e-17  Score=134.64  Aligned_cols=110  Identities=30%  Similarity=0.448  Sum_probs=80.8

Q ss_pred             chhHHHHHhhcccc-CC-CCCCCeEEEeeCcHHHhcCCCC-------c---H-HHhhhcccCCccccccccCCCCC-Cee
Q 043847           38 YLSMALTLEFGSKF-LT-PPSPSLTIFSPSDSAFASFGQP-------S---L-ALLQLHFSPLSFPSTFMKTLPYH-AKI  103 (325)
Q Consensus        38 ~~s~~~~l~~~~~~-~l-~~~~~~TvFAPtd~Af~~~~~~-------~---l-~lL~yHvv~g~~~~~~L~~~~~g-~~l  103 (325)
                      |..|+.+++.++-. .+ +..+.+|||||+|+||++++..       .   + .+|+||++++.++.++|..   + ..+
T Consensus         3 ~s~f~~~l~~~~l~~~l~~~~~~~TvfaP~d~a~~~~~~~~~~~~~~~~~~l~~~l~~hiv~~~~~~~~l~~---~~~~~   79 (128)
T PF02469_consen    3 LSTFSRLLEQAGLADLLNDSDGNYTVFAPTDDAFQKLSQETNSSLADSKEQLKSLLKYHIVPGSITSSDLRN---GKQTL   79 (128)
T ss_dssp             THHHHHHHHHTTCHHHHGCSSSSEEEEEE-HHHHHHSHHHHHHHHHTHHHHHHHHHHHTEEES---HCHHHC---HHEEE
T ss_pred             HHHHHHHHHHcCCHHHHhcCCCCEEEEEECHHHHHhccccccchhhhhhhhHhhhhhhEEEcCceehhhhcc---ccccc
Confidence            44455555544322 33 4558999999999999887311       1   2 8999999999999999985   4 578


Q ss_pred             ecccCCceEEEEEcCCCCeEEEcc-EEEecCccc-cCCCeEEEEeCCccCC
Q 043847          104 PTMSPNHTLIVTSLPSDDQVSLNG-VKINQPEIY-DDGSLRIFGIETFLDP  152 (325)
Q Consensus       104 ~Tll~g~~l~vt~~~~~~~v~vng-~~I~~~di~-~~G~~vvH~Id~vL~P  152 (325)
                      .|.+.|..+.|+.+.+++.+++|+ ++|...|+. .||  +||+||+||.|
T Consensus        80 ~t~~~g~~~~v~~~~~~~~~~v~~~a~i~~~~~~~~nG--~ih~id~vL~P  128 (128)
T PF02469_consen   80 ETLLNGQPLRVSSSPSNGTIYVNGKARIVKSDIEASNG--VIHIIDDVLIP  128 (128)
T ss_dssp             EBSSTTCEEEEEEEGGTTEEEECCEEEESEEEEEESSE--EEEEESS-TSS
T ss_pred             eeccCCCEEEEEEEecCCceEecCceEEEeCCEEeCCE--EEEEECceECc
Confidence            886789999999874467899999 999999985 566  99999999988

It has been suggested that the FAS1 domain represents an ancient cell adhesion domain common to plants and animals []; related FAS1 domains are also found in bacteria []. The crystal structure of FAS1 domains 3 and 4 of fasciclin I from Drosophila melanogaster (Fruit fly) has been determined, revealing a novel domain fold consisting of a seven-stranded beta wedge and at least five alpha helices; two well-ordered N-acetylglucosamine groups attached to a conserved asparagine are located in the interface region between the two FAS1 domains []. Fasciclin I is an insect neural cell adhesion molecule involved in axonal guidance that is attached to the membrane by a GPI-anchored protein. FAS1 domains are present in many secreted and membrane-anchored proteins. These proteins are usually GPI anchored and consist of: (i) a single FAS1 domain, (ii) a tandem array of FAS1 domains, or (iii) FAS1 domain(s) interspersed with other domains. Proteins known to contain a FAS1 domain include: Fasciclin I (4 FAS1 domains). Human TGF-beta induced Ig-H3 (BIgH3) protein (4 FAS1 domains), where the FAS1 domains mediate cell adhesion through an interaction with alpha3/beta1 integrin; mutation in the FAS1 domains result in corneal dystrophy []. Volvox major cell adhesion protein (2 FAS1 domains) []. Arabidopsis fasciclin-like arabinogalactan proteins (2 FAS1 domains) []. Mammalian stabilin protein, a family of fasciclin-like hyaluronan receptor homologues (7 FAS1 domains)[]. Human extracellular matrix protein periostin (4 FAS1 domains). Bacterial immunogenic protein MPT70 (1 FAS1 domain) []. The FAS1 domains of both human periostin (Q15063 from SWISSPROT) and BIgH3 (Q15582 from SWISSPROT) proteins were found to contain vitamin K-dependent gamma-carboxyglutamate residues []. Gamma-carboxyglutamate residues are more commonly associated with GLA domains (IPR000294 from INTERPRO), where they occur through post-translational modification catalysed by the vitamin K-dependent enzyme gamma-glutamylcarboxylase.; PDB: 1O70_A 1W7D_A 1W7E_A 1NYO_A 1X3B_A 2VXP_A.

>KOG1437 consensus Fasciclin and related adhesion glycoproteins [Cell wall/membrane/envelope biogenesis; Extracellular structures]

Probab=99.53  E-value=4.5e-14  Score=144.10  Aligned_cols=219  Identities=13%  Similarity=0.145  Sum_probs=139.7

Q ss_pred             CCCCeEEEeeCcHHHhcCCCCcH-HHhhhcccCCccccccccCCC-------CCCeeecccCCceEEEEEcCCCCeEEEc
Q 043847           55 PSPSLTIFSPSDSAFASFGQPSL-ALLQLHFSPLSFPSTFMKTLP-------YHAKIPTMSPNHTLIVTSLPSDDQVSLN  126 (325)
Q Consensus        55 ~~~~~TvFAPtd~Af~~~~~~~l-~lL~yHvv~g~~~~~~L~~~~-------~g~~l~Tll~g~~l~vt~~~~~~~v~vn  126 (325)
                      ..++.|.+||+|+||.+.+.... .++.||.+.|.+.........       .++...   .|+........++....+|
T Consensus       269 ~~d~rt~~a~tn~a~~~ip~~~~~~~~~~~~v~~~~~~~~i~~~~~~~~s~~~~~~r~---~~~~~~~a~g~~g~~~~~n  345 (682)
T KOG1437|consen  269 FVDPRTHLAPTNEAFFTIPRGYPPRILGYHLVLGNLKYNHILDNMKLGPSLAPGTVRL---TGEGVAIAPGSSGERYHIN  345 (682)
T ss_pred             ccccccccccCcchhhcccccCCCcccccccchhhhhhhhhcccccccccccccceee---ccccccccccCCCceEEee
Confidence            34678999999999988753332 556677776665444433210       011111   1222223332234567789


Q ss_pred             cEEEecCccccCCCeEEEEeCCccCCCccccccCCCCCCCCccCCchhhhhcccCCCCcHHHHHHHHhhcChHHHHHHHH
Q 043847          127 GVKINQPEIYDDGSLRIFGIETFLDPDYSVSESQDGADPDLTLGQSVECLESVRGSEMNFDDAVRYLTTEGYNVMASFLQ  206 (325)
Q Consensus       127 g~~I~~~di~~~G~~vvH~Id~vL~P~~~~~~~~~~~~p~~~~~~p~~~~a~~~~~~~~~~~~~~~L~~~gf~~~~~~L~  206 (325)
                      |..++..|...++ +++|.||.++.|+..                               +.++++.++...+++..++.
T Consensus       346 g~~~I~kd~i~~~-~~lh~id~~l~p~~~-------------------------------~~l~~La~e~~~st~~rlv~  393 (682)
T KOG1437|consen  346 GRAIIQKDFIHTN-GLLHYIDYVLEPDSL-------------------------------KNLMSLAREDEISTSMRLVA  393 (682)
T ss_pred             cceeEEEeeeccc-eEEEEcccccCCchH-------------------------------HHHHHHHhcccccHHHHHHH
Confidence            9877767766442 399999999998622                               24555555555566665553


Q ss_pred             Hh-hcc-ccCCCceeEEEeCCCHHHhccCCCh--hhHHhhhcccccCCccchhcccccCCCceeeeccCCcEEEEEEeC-
Q 043847          207 LQ-LVG-FKDQTVVLTVFAPPDEAFQGYFGNF--SEYSSIFLRHVVPCKISYQDLIDFDQGTVLPTFLEGFKINVTKSL-  281 (325)
Q Consensus       207 ~~-~~~-l~~~~~~~TvFAPtd~AF~~l~~~~--~~l~~iL~yHvVp~~~~~~~L~~~~~g~~l~Tl~~g~~l~v~~~~-  281 (325)
                      .. +-. +..... +|+|+|+|+||+.+....  ...+.+|+||++|.+...++..+.  ++.++|+ .|..+..-... 
T Consensus       394 elgll~~L~~n~e-~t~~lp~n~~fd~~~~~~~r~l~~qIL~~HII~~~~~~~~~y~~--~~~v~t~-g~~~l~~fv~r~  469 (682)
T KOG1437|consen  394 ELGLLTALAPNDE-ATLLLPTNNLFDDLTPLESRRLAEQILYNHIIPEYLTSSSMYNG--QTTVRTL-GKNKLLYFVYRH  469 (682)
T ss_pred             hccceEEEcCCCc-eEEeeehhhhccCCChhhhHHHHHHHHHHhCcchhhhhhhhhcc--cceeecc-CCeEEEEEEecc
Confidence            32 223 445556 999999999999864321  225789999999999988877642  3367776 55555543222 


Q ss_pred             ----C--eEEEee-EEEecCccccCCCeEEEEeCCccCC
Q 043847          282 ----K--DLYLNN-VRVNDPSLYLNDWMFIHGVEKIVPE  313 (325)
Q Consensus       282 ----~--~v~vng-~~V~~~di~~~~ngvIH~Id~VL~P  313 (325)
                          +  .+.++| +.|.+.|+. ..||+||.||+|+.|
T Consensus       470 ~~s~~~t~i~~~~~~~Ii~aDi~-~~nGvvH~id~vl~p  507 (682)
T KOG1437|consen  470 SVSANVTDILIGNEACIIEADIS-VKNGVVHIIDRVLDP  507 (682)
T ss_pred             cccccceeeeccceeeEEecccc-eecCceEEeeEEcCc
Confidence                1  456666 467788965 578999999999999

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	325
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-07
2vxp_A	132	Transforming growth factor-beta-induced protein IG	2e-07
1o70_A	324	Fasciclin I, FAS I, FCN; cell adhesion, AXON guida	6e-07
1nyo_A	163	Immunogenic protein MPT70; seven-stranded beta-bar	2e-05
1w7d_A	137	Fasciclin-like protein; cell adhesion; NMR {Rhodob	2e-04

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 51.8 bits (123), Expect = 2e-07
 Identities = 55/360 (15%), Positives = 101/360 (28%), Gaps = 118/360 (32%)

Query: 1   MAAKLVISLTLLSLF-------SLSYPLPDNSVSDAVEILSNSGYLSMALTLEFGSKFLT 53
           +A  + +S  +           +L      NS    +E+L         L  +    + +
Sbjct: 166 VALDVCLSYKVQCKMDFKIFWLNLKN---CNSPETVLEMLQK-------LLYQIDPNWTS 215

Query: 54  PPSPSLTIFSPSDSAFASFGQPSLALLQLHFSPLSFPSTFMKTLPYHAKIPTMSPNHTLI 113
               S  I     S      Q  L                +K+ PY          + L+
Sbjct: 216 RSDHSSNIKLRIHSI-----QAEL-------------RRLLKSKPY---------ENCLL 248

Query: 114 VTSLPSDDQVSLNGVKINQPEIYD--DGSLRIF------GIETFLDPDYSVSESQDGADP 165
           V  L   +        +   + ++  + S +I        +  FL    +   S D    
Sbjct: 249 V--L--LN--------VQNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSM 296

Query: 166 DLTLGQSVECLESVRGSEMNFDDAVRYLTTEGYNVMASFLQLQLVG--FKD--------- 214
            LT  +    L           D    L  E      +  +L ++    +D         
Sbjct: 297 TLTPDEVKSLLLKYLD--CRPQD----LPREVLTT--NPRRLSIIAESIRDGLATWDNWK 348

Query: 215 -------QTVV---LTVFAPPDEAFQGYFGNFSEYSSIFLRHV-VPCK---ISYQDLIDF 260
                   T++   L V  P +  ++  F       S+F     +P     + + D+I  
Sbjct: 349 HVNCDKLTTIIESSLNVLEPAE--YRKMFDRL----SVFPPSAHIPTILLSLIWFDVIKS 402

Query: 261 DQGTVLPTFLEGFKINVTKSLKDLYLNNVRVNDPSLYL------NDWMFIHGVEKIVPEY 314
           D   V+             SL +       ++ PS+YL       +   +H    IV  Y
Sbjct: 403 DVMVVVNKL-------HKYSLVEKQPKESTISIPSIYLELKVKLENEYALH--RSIVDHY 453

>2vxp_A Transforming growth factor-beta-induced protein IG-H3; RGD-containing collagen-associated protein, FAS1, BIGH3, vision, amyloid, RGD-CAP, secreted; 2.5A {Homo sapiens} PDB: 1x3b_A Length = 132

 Score = 48.1 bits (115), Expect = 2e-07
 Identities = 19/81 (23%), Positives = 32/81 (39%), Gaps = 12/81 (14%)

Query: 219 LTVFAPPDEAF--------QGYFGNFSEYSSIFLRHVVPCKISYQDLIDFDQGTVLPTFL 270
            TVFAP +EAF            G+  E ++I   H+    +    +        L + L
Sbjct: 36  YTVFAPTNEAFRALPPRERSRLLGDAKELANILKYHIGDEILVSGGIGA---LVRLKS-L 91

Query: 271 EGFKINVTKSLKDLYLNNVRV 291
           +G K+ V+     + +N   V
Sbjct: 92  QGDKLEVSLKNNVVSVNKEPV 112

>1o70_A Fasciclin I, FAS I, FCN; cell adhesion, AXON guidance, extracellular module, genetic disorder, corneal dystrophy; HET: NAG; 2.6A {Drosophila melanogaster} SCOP: b.118.1.1 b.118.1.1 Length = 324

 Score = 49.6 bits (118), Expect = 6e-07
 Identities = 45/319 (14%), Positives = 95/319 (29%), Gaps = 85/319 (26%)

Query: 23  DNSVSDA----VEILSNSGYLSM-ALTLEFGSKF---LTPPSPSLTIFSPSDSAFASFGQ 74
           D +V+       E   N        + ++ G      +   +  +TI +PS+ A+ S   
Sbjct: 5   DTTVTQFLQSFKENAENGALRKFYEVIMDNGGAVLDDINSLTE-VTILAPSNEAWNSSNI 63

Query: 75  PSL--------ALLQLHFSPLSFPSTFMKT--LPYHAKIPTMSPNHTLIVTSLPSDDQ-- 122
            ++         +L +H          ++       A++PT++ N  L            
Sbjct: 64  NNVLRDRNKMRQILNMHIIKDRLNVDKIRQKNANLIAQVPTVNNNTFLYFNVRGEGSDTV 123

Query: 123 VSLNGVKIN----QPEIYDDGSLRIFGIETFLDPDYSVSESQDGADPDLT----LGQSVE 174
           +++ G  +N    Q ++       +  I+  L   Y+    +  +DP ++    +G+   
Sbjct: 124 ITVEGGGVNATVIQADVAQTNGY-VHIIDHVLGVPYTTVLGKLESDPMMSDTYKMGKFSH 182

Query: 175 CLESVRGSEMNFDDAVRYLTTEGYNVMASFLQLQLVGFKDQTVVLTVFAPPDEAFQGYFG 234
             + +  ++  F                                 T F P D+ +Q    
Sbjct: 183 FNDQLNNTQRRF---------------------------------TYFVPRDKGWQKTEL 209

Query: 235 NFSEY-------------SSIFLRHVVPCKISY-----QDLIDFDQGTVLPTFLEGFKIN 276
           ++                 SI  RH+      Y               +LPTF +   I 
Sbjct: 210 DYPSAHKKLFMADFSYHSKSILERHLAISDKEYTMKDLVKFSQESGSVILPTFRDSLSIR 269

Query: 277 VTKS----LKDLYLNNVRV 291
           V +     +       + V
Sbjct: 270 VEEEAGRYVIIWNYKKINV 288

>1nyo_A Immunogenic protein MPT70; seven-stranded beta-barrel, fasciclin domain, structural genomics, PSI, protein structure initiative; NMR {Mycobacterium tuberculosis} SCOP: b.118.1.1 Length = 163

 Score = 43.6 bits (103), Expect = 2e-05
 Identities = 23/81 (28%), Positives = 32/81 (39%), Gaps = 14/81 (17%)

Query: 219 LTVFAPPDEAFQ--------GYFGNFSEYSSIFLRHVVPCKISYQDLIDFDQGTVLPTFL 270
            TVFAP + AF             N S  +SI   HVV  + S  +++         T L
Sbjct: 66  YTVFAPTNAAFSKLPASTIDELKTNSSLLTSILTYHVVAGQTSPANVVG-----TRQT-L 119

Query: 271 EGFKINVTKSLKDLYLNNVRV 291
           +G  + VT     L + N  V
Sbjct: 120 QGASVTVTGQGNSLKVGNADV 140

>1w7d_A Fasciclin-like protein; cell adhesion; NMR {Rhodobacter sphaeroides} PDB: 1w7e_A Length = 137

 Score = 40.0 bits (94), Expect = 2e-04
 Identities = 24/85 (28%), Positives = 32/85 (37%), Gaps = 20/85 (23%)

Query: 219 LTVFAPPDEAFQG----------YFGNFSEYSSIFLRHVVPCKISYQDLIDFDQGTVLPT 268
            TVFAP D AF               N  + + I   HVVP ++   DL +   G    T
Sbjct: 37  FTVFAPTDAAFAALPEGTVEDLLKPENKEKLTEILTYHVVPGEVMSSDLTE---GMTAET 93

Query: 269 FLEGFKINVTKSLKDLYLNNVRVND 293
            +EG  + VT           +VN 
Sbjct: 94  -VEGGALTVTLE------GGPKVNG 111

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	325
1o70_A	324	Fasciclin I, FAS I, FCN; cell adhesion, AXON guida	100.0
1w7d_A	137	Fasciclin-like protein; cell adhesion; NMR {Rhodob	99.92
2vxp_A	132	Transforming growth factor-beta-induced protein IG	99.91
1nyo_A	163	Immunogenic protein MPT70; seven-stranded beta-bar	99.9
1w7d_A	137	Fasciclin-like protein; cell adhesion; NMR {Rhodob	99.84
2vxp_A	132	Transforming growth factor-beta-induced protein IG	99.82
1nyo_A	163	Immunogenic protein MPT70; seven-stranded beta-bar	99.81
1o70_A	324	Fasciclin I, FAS I, FCN; cell adhesion, AXON guida	99.76

>1o70_A Fasciclin I, FAS I, FCN; cell adhesion, AXON guidance, extracellular module, genetic disorder, corneal dystrophy; HET: NAG; 2.6A {Drosophila melanogaster} SCOP: b.118.1.1 b.118.1.1

Probab=100.00  E-value=9.4e-41  Score=317.23  Aligned_cols=258  Identities=18%  Similarity=0.254  Sum_probs=180.1

Q ss_pred             hcHHHHHH------h-CCchhHHHHHhhcc--cc-CCCCCCCeEEEeeCcHHHhcCCCCc-------H-HHhhhcccCCc
Q 043847           27 SDAVEILS------N-SGYLSMALTLEFGS--KF-LTPPSPSLTIFSPSDSAFASFGQPS-------L-ALLQLHFSPLS   88 (325)
Q Consensus        27 ~ni~~iL~------~-~g~~s~~~~l~~~~--~~-~l~~~~~~TvFAPtd~Af~~~~~~~-------l-~lL~yHvv~g~   88 (325)
                      .|++++|+      + ..|..+..+++.++  -. .++..+++|||||+|+||.+.....       + ++|+||+++|+
T Consensus         6 ~~i~~~L~~~~~~~~~~~~s~~~~~l~~ag~~l~~~L~~~~~~TvFAPtn~Af~~~~~~~l~~~~~~l~~iL~yHvv~g~   85 (324)
T 1o70_A            6 TTVTQFLQSFKENAENGALRKFYEVIMDNGGAVLDDINSLTEVTILAPSNEAWNSSNINNVLRDRNKMRQILNMHIIKDR   85 (324)
T ss_dssp             -------------CCHHHHHHHHHHHHHTCSHHHHHHHTCSSEEEEEECHHHHHHTCTHHHHTCHHHHHHHHHHTEESSC
T ss_pred             hhHHHHHHHHHhhhcCCcHHHHHHHHHHHhHHHHHHHcCCCCeEEEEEChHhhhcccHhhhhCCHHHHHHHHHhcEeCCe
Confidence            46777777      3 33666777777665  11 3455689999999999998763211       2 89999999999


Q ss_pred             cccccccCCCCC--CeeecccCCceEEEEEcC--CCCeEEEcc----EEEecCccc-cCCCeEEEEeCCccCCCcccccc
Q 043847           89 FPSTFMKTLPYH--AKIPTMSPNHTLIVTSLP--SDDQVSLNG----VKINQPEIY-DDGSLRIFGIETFLDPDYSVSES  159 (325)
Q Consensus        89 ~~~~~L~~~~~g--~~l~Tll~g~~l~vt~~~--~~~~v~vng----~~I~~~di~-~~G~~vvH~Id~vL~P~~~~~~~  159 (325)
                      ++.++|.....+  ..++|+..+..++++.++  +++.++++|    ++|+.+|+. .||  +||+||+||.|+..    
T Consensus        86 ~~~~~l~~~~~~~~~~~~Tl~g~~~l~~~v~~~~~~~~v~v~~g~~~a~v~~~di~~~NG--vIhvID~VL~pp~~----  159 (324)
T 1o70_A           86 LNVDKIRQKNANLIAQVPTVNNNTFLYFNVRGEGSDTVITVEGGGVNATVIQADVAQTNG--YVHIIDHVLGVPYT----  159 (324)
T ss_dssp             CCHHHHHHHTSSSCCCEEBSSTTCEEEEEEESCGGGCEEEEEETTEEEEEEEEEEECSSE--EEEEESSCTTSCCS----
T ss_pred             ecHHHHhhccCCCceEEEcCCCCceEEEEEeecCCceEEEEcCCceeEEEEeccccccCc--EEEEEchhhhhchh----
Confidence            999999864311  167786533336666553  234688885    899999985 676  99999999998632    


Q ss_pred             CCCCCCCCccCCchhhhhcccCCCCcHHHHHHHHhhc-ChHHHHHHHHH-hhccccC-CCceeEEEeCCCHHHhccC---
Q 043847          160 QDGADPDLTLGQSVECLESVRGSEMNFDDAVRYLTTE-GYNVMASFLQL-QLVGFKD-QTVVLTVFAPPDEAFQGYF---  233 (325)
Q Consensus       160 ~~~~~p~~~~~~p~~~~a~~~~~~~~~~~~~~~L~~~-gf~~~~~~L~~-~~~~l~~-~~~~~TvFAPtd~AF~~l~---  233 (325)
                                                  ++.+.+++. .|+.|..+++. .+.+.++ ..+++|||||+|+||+++.   
T Consensus       160 ----------------------------ti~~~l~~~~~fs~~~~~l~~~gl~~~L~~~~~~~TvFAPtd~Af~~l~~~~  211 (324)
T 1o70_A          160 ----------------------------TVLGKLESDPMMSDTYKMGKFSHFNDQLNNTQRRFTYFVPRDKGWQKTELDY  211 (324)
T ss_dssp             ----------------------------CHHHHHHHCGGGHHHHHHTTTTTTTGGGGCSSSEEEEEEECHHHHHHHHHHC
T ss_pred             ----------------------------hHHHHhhcCchHHHHHHHHHhhCHHHHhCCCCCCeEEEEeChHHHHhhhhhc
Confidence                                        244556554 48888877753 3444443 4667999999999999873   


Q ss_pred             ---------CCh-hhHHhhhcccccCC--ccchhcccccCC--C-ceeeeccCCcEEEEEE--eCCeEEEe----eEEEe
Q 043847          234 ---------GNF-SEYSSIFLRHVVPC--KISYQDLIDFDQ--G-TVLPTFLEGFKINVTK--SLKDLYLN----NVRVN  292 (325)
Q Consensus       234 ---------~~~-~~l~~iL~yHvVp~--~~~~~~L~~~~~--g-~~l~Tl~~g~~l~v~~--~~~~v~vn----g~~V~  292 (325)
                               .+. +.++++|+||+||+  +++.++|.+...  + ..++|+.  ..+.|+.  .++.++||    +++|+
T Consensus       212 ~~~~~~~l~~~~~~~l~~iL~yHvv~~~~~~~~~~l~~~~~~~~~~~~~Tl~--~~l~v~~~~~~~~v~v~~~~~~a~v~  289 (324)
T 1o70_A          212 PSAHKKLFMADFSYHSKSILERHLAISDKEYTMKDLVKFSQESGSVILPTFR--DSLSIRVEEEAGRYVIIWNYKKINVY  289 (324)
T ss_dssp             HHHHHHHTSGGGHHHHHHHHHTTEEEESSCCCHHHHHHHHHHSSSEEEECSS--SEEEEEEEEETTEEEEEETTEEEEEE
T ss_pred             hhHHHHHhccCcHHHHHHHHHhcEeCCcceEcHHHHhhhccCCCeeeeeccC--CcEEEEEEecCCEEEEEecCceeEEE
Confidence                     122 37899999999999  777788875321  1 1478874  5677764  67889998    79999


Q ss_pred             cCccccCCCeEEEEeCCccCCCCCCcCCC
Q 043847          293 DPSLYLNDWMFIHGVEKIVPEYVPQSSQI  321 (325)
Q Consensus       293 ~~di~~~~ngvIH~Id~VL~P~~~~~~~~  321 (325)
                      .+|+. ++|||||+||+||+|+......-
T Consensus       290 ~~di~-~~NGvIHvID~VL~P~~~~~~~g  317 (324)
T 1o70_A          290 RPDVE-CTNGIIHVIDYPLLEEKDVVVAG  317 (324)
T ss_dssp             EEEEE-ETTEEEEEESSCSCCTTTTC---
T ss_pred             Ecccc-cCCCeEEEeceeecCCcccccCC
Confidence            99976 56899999999999998755433

>1w7d_A Fasciclin-like protein; cell adhesion; NMR {Rhodobacter sphaeroides} PDB: 1w7e_A

Probab=99.92  E-value=2.5e-26  Score=192.26  Aligned_cols=122  Identities=26%  Similarity=0.311  Sum_probs=98.1

Q ss_pred             HHHHHHhhc-ChHHHHHHHHH-hhccccCCCceeEEEeCCCHHHhccCC----------ChhhHHhhhcccccCCccchh
Q 043847          188 DAVRYLTTE-GYNVMASFLQL-QLVGFKDQTVVLTVFAPPDEAFQGYFG----------NFSEYSSIFLRHVVPCKISYQ  255 (325)
Q Consensus       188 ~~~~~L~~~-gf~~~~~~L~~-~~~~l~~~~~~~TvFAPtd~AF~~l~~----------~~~~l~~iL~yHvVp~~~~~~  255 (325)
                      +++++|++. +|++|..+++. .+.+.++..+++|||||+|+||++++.          +.+.++++|+|||+|++++.+
T Consensus         4 ~i~~~l~~~~~~s~f~~~l~~agl~~~L~~~~~~TvFAPtn~Af~~l~~~~~~~l~~~~~~~~l~~lL~yHvv~~~~~~~   83 (137)
T 1w7d_A            4 DIVETATGAGSFTTLLTAAEAAGLVDTLKGDGPFTVFAPTDAAFAALPEGTVEDLLKPENKEKLTEILTYHVVPGEVMSS   83 (137)
T ss_dssp             TTGGGGGSCSSSTTTTHHHHHTTTHHHHTSSSCEEEECCCHHHHTTSTTTHHHHTTSHHHHHHHHHHHHHHEEESCCCTT
T ss_pred             CHHHHHHhCCCHHHHHHHHHHcCCHHHHcCCCCEEEEEECHHHHHHcCHhHHHHHhCcCCHHHHHHHHHhhEeCcEEcHH
Confidence            345566543 48888888754 344444455679999999999999853          345678999999999999888


Q ss_pred             cccccCCCceeeeccCCcEEEEEEeCCeEEEeeEEEecCccccCCCeEEEEeCCccCCCC
Q 043847          256 DLIDFDQGTVLPTFLEGFKINVTKSLKDLYLNNVRVNDPSLYLNDWMFIHGVEKIVPEYV  315 (325)
Q Consensus       256 ~L~~~~~g~~l~Tl~~g~~l~v~~~~~~v~vng~~V~~~di~~~~ngvIH~Id~VL~P~~  315 (325)
                      +|..   |..++|+ .|+.|.|+..+| ++|||++|+.+|+. ++|||||+||+||+|+.
T Consensus        84 ~l~~---~~~~~tl-~G~~l~v~~~~g-v~vn~a~v~~~di~-~~NGvIHvID~VL~P~s  137 (137)
T 1w7d_A           84 DLTE---GMTAETV-EGGALTVTLEGG-PKVNGVSISQPDVD-ASNGVIHVIDGVLMPGA  137 (137)
T ss_dssp             TSCS---SEEEECT-TSCEEEEECTTS-CEETTEECSBCCCB-CSSSEEEBCSSCCSSCC
T ss_pred             HhcC---CCeeecc-CCceEEEEecCC-EEEeCcEEEECCee-cCCeEEEEECeeeCCCC
Confidence            8764   6678886 788999998888 99999999999965 67999999999999973

>2vxp_A Transforming growth factor-beta-induced protein IG-H3; RGD-containing collagen-associated protein, FAS1, BIGH3, vision, amyloid, RGD-CAP, secreted; 2.5A {Homo sapiens} PDB: 1x3b_A

Probab=99.91  E-value=4.3e-25  Score=183.57  Aligned_cols=120  Identities=19%  Similarity=0.265  Sum_probs=98.1

Q ss_pred             HHHHHHhhc-ChHHHHHHHHH-hhccccCCCceeEEEeCCCHHHhccCC--------ChhhHHhhhcccccCCccchhcc
Q 043847          188 DAVRYLTTE-GYNVMASFLQL-QLVGFKDQTVVLTVFAPPDEAFQGYFG--------NFSEYSSIFLRHVVPCKISYQDL  257 (325)
Q Consensus       188 ~~~~~L~~~-gf~~~~~~L~~-~~~~l~~~~~~~TvFAPtd~AF~~l~~--------~~~~l~~iL~yHvVp~~~~~~~L  257 (325)
                      ++++.|++. +|++|..+++. .+.+.++..+++|||||+|+||++++.        +.+.++++|+|||+|+.++.+++
T Consensus         3 ti~~~l~~~~~fs~~~~~l~~agl~~~L~~~~~~TvFAPtn~Af~~l~~~~~~~l~~~~~~l~~iL~yHvv~~~~~~~~l   82 (132)
T 2vxp_A            3 TVMDVLKGDNRFSMLVAAIQSAGLTETLNREGVYTVFAPTNEAFRALPPRERSRLLGDAKELANILKYHIGDEILVSGGI   82 (132)
T ss_dssp             CHHHHHTTSTTCHHHHHHHHHHTCHHHHHSSCCEEEEEECHHHHHHSCHHHHHHHHTCHHHHHHHHHHSBBSSCCCSTTC
T ss_pred             cHHHHHHcCCCHHHHHHHHHHcCcHHHHcCCCCEEEEeECHHHHHhhCHHHHHHHhcCHHHHHHHHHhcCcCceeehhhc
Confidence            467788765 49999998864 344444446679999999999999852        56678899999999998887776


Q ss_pred             cccCCCceeeeccCCcEEEEEEeCCeEEEeeEEEecCccccCCCeEEEEeCCccC
Q 043847          258 IDFDQGTVLPTFLEGFKINVTKSLKDLYLNNVRVNDPSLYLNDWMFIHGVEKIVP  312 (325)
Q Consensus       258 ~~~~~g~~l~Tl~~g~~l~v~~~~~~v~vng~~V~~~di~~~~ngvIH~Id~VL~  312 (325)
                      .   .+..++|+ .|+.|.|+..++.++|||++|+.+|+. ++|||||+||+||+
T Consensus        83 ~---~~~~~~tl-~G~~l~v~~~~~~v~vn~a~v~~~di~-a~NGvIHvID~VLl  132 (132)
T 2vxp_A           83 G---ALVRLKSL-QGDKLEVSLKNNVVSVNKEPVAEPDIM-ATNGVVHVITNVLQ  132 (132)
T ss_dssp             S---SCEEEEBT-TSSEEEEEEETTEEEESSCBEEEEEEE-ETTEEEEEESSCC-
T ss_pred             c---CCceEecC-CCCEEEEEEeCCEEEEeccEEEEccee-cCCEEEEEECcEeC
Confidence            4   35678886 788999999999999999999999966 57999999999985

>1nyo_A Immunogenic protein MPT70; seven-stranded beta-barrel, fasciclin domain, structural genomics, PSI, protein structure initiative; NMR {Mycobacterium tuberculosis} SCOP: b.118.1.1

Probab=99.90  E-value=2e-24  Score=186.06  Aligned_cols=122  Identities=22%  Similarity=0.227  Sum_probs=102.0

Q ss_pred             HHHHHHHHhhcC-hHHHHHHHH-----H-hhccccCCCceeEEEeCCCHHHhccCC--------ChhhHHhhhcccccCC
Q 043847          186 FDDAVRYLTTEG-YNVMASFLQ-----L-QLVGFKDQTVVLTVFAPPDEAFQGYFG--------NFSEYSSIFLRHVVPC  250 (325)
Q Consensus       186 ~~~~~~~L~~~g-f~~~~~~L~-----~-~~~~l~~~~~~~TvFAPtd~AF~~l~~--------~~~~l~~iL~yHvVp~  250 (325)
                      ..++.++|++.+ |++|..+|+     . .+.+.++..+ +|||||+|+||+++..        +.+.++++|+|||||+
T Consensus        27 ~~~i~~~l~~~~~~s~f~~~l~~~~~~~agl~~~L~~~g-~TvFAPtn~AF~~l~~~~~~~L~~~~~~L~~iL~yHvv~g  105 (163)
T 1nyo_A           27 QDPVAVAASNNPELTTLTAALSGQLNPQVNLVDTLNSGQ-YTVFAPTNAAFSKLPASTIDELKTNSSLLTSILTYHVVAG  105 (163)
T ss_dssp             HSCHHHHHTTSTTTHHHHHHHHSSSCTTCCCHHHHTSSS-EEECCBCHHHHHHSCHHHHHHHTTCSSHHHHHHHHTEEES
T ss_pred             CcCHHHHHHhCCCHHHHHHHHHhccccccCHHHHhCCCC-cEEEEECHHHHHhccHHHHHHHhcCHHHHHHHHHhceECC
Confidence            346888887654 999999998     4 2444455567 9999999999999852        4567899999999999


Q ss_pred             ccchhcccccCCCceeeeccCCcEEEEEEeCCeEEEeeEEEecCccccCCCeEEEEeCCccCCCC
Q 043847          251 KISYQDLIDFDQGTVLPTFLEGFKINVTKSLKDLYLNNVRVNDPSLYLNDWMFIHGVEKIVPEYV  315 (325)
Q Consensus       251 ~~~~~~L~~~~~g~~l~Tl~~g~~l~v~~~~~~v~vng~~V~~~di~~~~ngvIH~Id~VL~P~~  315 (325)
                      +++.++|.    | .++|+ .|+.|+|+..++.++||+++|+.+|+. ++|||||+||+||+|+.
T Consensus       106 ~~~~~~l~----g-~~~Tl-~G~~l~v~~~~~~v~vn~a~V~~~di~-a~NGvIHvID~VL~P~~  163 (163)
T 1nyo_A          106 QTSPANVV----G-TRQTL-QGASVTVTGQGNSLKVGNADVVCGGVS-TANATVYMIDSVLMPPA  163 (163)
T ss_dssp             CCCTTTSC----E-EEECT-TSSEEEEEECSSCEEETTEECSSBCCC-CSSEEEBCBSSCCCCCC
T ss_pred             EEcHHHhC----C-ccccC-CCCEEEEEEECCEEEEeccEEEECceE-cCCEEEEEECcEeCCCC
Confidence            99988875    3 58887 789999999889999999999999965 67999999999999973

>1w7d_A Fasciclin-like protein; cell adhesion; NMR {Rhodobacter sphaeroides} PDB: 1w7e_A

Probab=99.84  E-value=9e-22  Score=164.48  Aligned_cols=118  Identities=26%  Similarity=0.386  Sum_probs=95.1

Q ss_pred             hcHHHHHHhC-CchhHHHHHhhcccc-CCCCCCCeEEEeeCcHHHhcCCCCc------------H-HHhhhcccCCcccc
Q 043847           27 SDAVEILSNS-GYLSMALTLEFGSKF-LTPPSPSLTIFSPSDSAFASFGQPS------------L-ALLQLHFSPLSFPS   91 (325)
Q Consensus        27 ~ni~~iL~~~-g~~s~~~~l~~~~~~-~l~~~~~~TvFAPtd~Af~~~~~~~------------l-~lL~yHvv~g~~~~   91 (325)
                      .++.++|++. +|..+..+++.++-. .++..+++|||||+|+||.+++...            + ++|+||++++++..
T Consensus         3 ~~i~~~l~~~~~~s~f~~~l~~agl~~~L~~~~~~TvFAPtn~Af~~l~~~~~~~l~~~~~~~~l~~lL~yHvv~~~~~~   82 (137)
T 1w7d_A            3 GDIVETATGAGSFTTLLTAAEAAGLVDTLKGDGPFTVFAPTDAAFAALPEGTVEDLLKPENKEKLTEILTYHVVPGEVMS   82 (137)
T ss_dssp             STTGGGGGSCSSSTTTTHHHHHTTTHHHHTSSSCEEEECCCHHHHTTSTTTHHHHTTSHHHHHHHHHHHHHHEEESCCCT
T ss_pred             CCHHHHHHhCCCHHHHHHHHHHcCCHHHHcCCCCEEEEEECHHHHHHcCHhHHHHHhCcCCHHHHHHHHHhhEeCcEEcH
Confidence            3677778765 577788888776533 3455689999999999999985321            2 89999999999999


Q ss_pred             ccccCCCCCCeeecccCCceEEEEEcCCCCeEEEccEEEecCccc-cCCCeEEEEeCCccCCC
Q 043847           92 TFMKTLPYHAKIPTMSPNHTLIVTSLPSDDQVSLNGVKINQPEIY-DDGSLRIFGIETFLDPD  153 (325)
Q Consensus        92 ~~L~~~~~g~~l~Tll~g~~l~vt~~~~~~~v~vng~~I~~~di~-~~G~~vvH~Id~vL~P~  153 (325)
                      ++|..   +..+.|+ .|+.++|+..  ++ +++||++|+++|+. .||  +||+||+||.|+
T Consensus        83 ~~l~~---~~~~~tl-~G~~l~v~~~--~g-v~vn~a~v~~~di~~~NG--vIHvID~VL~P~  136 (137)
T 1w7d_A           83 SDLTE---GMTAETV-EGGALTVTLE--GG-PKVNGVSISQPDVDASNG--VIHVIDGVLMPG  136 (137)
T ss_dssp             TTSCS---SEEEECT-TSCEEEEECT--TS-CEETTEECSBCCCBCSSS--EEEBCSSCCSSC
T ss_pred             HHhcC---CCeeecc-CCceEEEEec--CC-EEEeCcEEEECCeecCCe--EEEEECeeeCCC
Confidence            99974   5567775 6889999875  45 99999999999985 677  999999999997

>2vxp_A Transforming growth factor-beta-induced protein IG-H3; RGD-containing collagen-associated protein, FAS1, BIGH3, vision, amyloid, RGD-CAP, secreted; 2.5A {Homo sapiens} PDB: 1x3b_A

Probab=99.82  E-value=1.2e-20  Score=156.75  Aligned_cols=116  Identities=17%  Similarity=0.315  Sum_probs=92.4

Q ss_pred             cHHHHHHhC-CchhHHHHHhhcccc-CCCCCCCeEEEeeCcHHHhcCCCC-------c---H-HHhhhcccCCccccccc
Q 043847           28 DAVEILSNS-GYLSMALTLEFGSKF-LTPPSPSLTIFSPSDSAFASFGQP-------S---L-ALLQLHFSPLSFPSTFM   94 (325)
Q Consensus        28 ni~~iL~~~-g~~s~~~~l~~~~~~-~l~~~~~~TvFAPtd~Af~~~~~~-------~---l-~lL~yHvv~g~~~~~~L   94 (325)
                      ++.++|++. .|..+..+++.++-. .++..+++|||||+|+||++++..       .   + ++|+||++++.+..+++
T Consensus         3 ti~~~l~~~~~fs~~~~~l~~agl~~~L~~~~~~TvFAPtn~Af~~l~~~~~~~l~~~~~~l~~iL~yHvv~~~~~~~~l   82 (132)
T 2vxp_A            3 TVMDVLKGDNRFSMLVAAIQSAGLTETLNREGVYTVFAPTNEAFRALPPRERSRLLGDAKELANILKYHIGDEILVSGGI   82 (132)
T ss_dssp             CHHHHHTTSTTCHHHHHHHHHHTCHHHHHSSCCEEEEEECHHHHHHSCHHHHHHHHTCHHHHHHHHHHSBBSSCCCSTTC
T ss_pred             cHHHHHHcCCCHHHHHHHHHHcCcHHHHcCCCCEEEEeECHHHHHhhCHHHHHHHhcCHHHHHHHHHhcCcCceeehhhc
Confidence            688889875 477788888776533 345568999999999999998631       1   2 89999999999988888


Q ss_pred             cCCCCCCeeecccCCceEEEEEcCCCCeEEEccEEEecCccc-cCCCeEEEEeCCccC
Q 043847           95 KTLPYHAKIPTMSPNHTLIVTSLPSDDQVSLNGVKINQPEIY-DDGSLRIFGIETFLD  151 (325)
Q Consensus        95 ~~~~~g~~l~Tll~g~~l~vt~~~~~~~v~vng~~I~~~di~-~~G~~vvH~Id~vL~  151 (325)
                      ..   +..++|+ .|+.++|+..  ++.+++||++|+++|+. .||  +||+||+||.
T Consensus        83 ~~---~~~~~tl-~G~~l~v~~~--~~~v~vn~a~v~~~di~a~NG--vIHvID~VLl  132 (132)
T 2vxp_A           83 GA---LVRLKSL-QGDKLEVSLK--NNVVSVNKEPVAEPDIMATNG--VVHVITNVLQ  132 (132)
T ss_dssp             SS---CEEEEBT-TSSEEEEEEE--TTEEEESSCBEEEEEEEETTE--EEEEESSCC-
T ss_pred             cC---CceEecC-CCCEEEEEEe--CCEEEEeccEEEEcceecCCE--EEEEECcEeC
Confidence            63   4567775 6889999886  45799999999999985 677  9999999984

>1nyo_A Immunogenic protein MPT70; seven-stranded beta-barrel, fasciclin domain, structural genomics, PSI, protein structure initiative; NMR {Mycobacterium tuberculosis} SCOP: b.118.1.1

Probab=99.81  E-value=2.5e-20  Score=160.39  Aligned_cols=118  Identities=16%  Similarity=0.240  Sum_probs=95.2

Q ss_pred             chhcHHHHHHhCC-chhHHHHHh-----hcccc-CCCCCCCeEEEeeCcHHHhcCCC---------Cc-H-HHhhhcccC
Q 043847           25 SVSDAVEILSNSG-YLSMALTLE-----FGSKF-LTPPSPSLTIFSPSDSAFASFGQ---------PS-L-ALLQLHFSP   86 (325)
Q Consensus        25 ~~~ni~~iL~~~g-~~s~~~~l~-----~~~~~-~l~~~~~~TvFAPtd~Af~~~~~---------~~-l-~lL~yHvv~   86 (325)
                      ...++.++|++.+ |..++.+++     .++-. .++..+ +|||||+|+||.+++.         +. + ++|+|||++
T Consensus        26 ~~~~i~~~l~~~~~~s~f~~~l~~~~~~~agl~~~L~~~g-~TvFAPtn~AF~~l~~~~~~~L~~~~~~L~~iL~yHvv~  104 (163)
T 1nyo_A           26 SQDPVAVAASNNPELTTLTAALSGQLNPQVNLVDTLNSGQ-YTVFAPTNAAFSKLPASTIDELKTNSSLLTSILTYHVVA  104 (163)
T ss_dssp             HHSCHHHHHTTSTTTHHHHHHHHSSSCTTCCCHHHHTSSS-EEECCBCHHHHHHSCHHHHHHHTTCSSHHHHHHHHTEEE
T ss_pred             CCcCHHHHHHhCCCHHHHHHHHHhccccccCHHHHhCCCC-cEEEEECHHHHHhccHHHHHHHhcCHHHHHHHHHhceEC
Confidence            3478999999765 677888888     54422 345556 9999999999999852         12 3 899999999


Q ss_pred             CccccccccCCCCCCeeecccCCceEEEEEcCCCCeEEEccEEEecCccc-cCCCeEEEEeCCccCCC
Q 043847           87 LSFPSTFMKTLPYHAKIPTMSPNHTLIVTSLPSDDQVSLNGVKINQPEIY-DDGSLRIFGIETFLDPD  153 (325)
Q Consensus        87 g~~~~~~L~~~~~g~~l~Tll~g~~l~vt~~~~~~~v~vng~~I~~~di~-~~G~~vvH~Id~vL~P~  153 (325)
                      +++..++|.    | .++|+ .|+.++|+..  ++.+++|+++|+++|+. .||  +||+||+||.|+
T Consensus       105 g~~~~~~l~----g-~~~Tl-~G~~l~v~~~--~~~v~vn~a~V~~~di~a~NG--vIHvID~VL~P~  162 (163)
T 1nyo_A          105 GQTSPANVV----G-TRQTL-QGASVTVTGQ--GNSLKVGNADVVCGGVSTANA--TVYMIDSVLMPP  162 (163)
T ss_dssp             SCCCTTTSC----E-EEECT-TSSEEEEEEC--SSCEEETTEECSSBCCCCSSE--EEBCBSSCCCCC
T ss_pred             CEEcHHHhC----C-ccccC-CCCEEEEEEE--CCEEEEeccEEEECceEcCCE--EEEEECcEeCCC
Confidence            999999986    3 67775 6899999986  45699999999999986 566  999999999997

>1o70_A Fasciclin I, FAS I, FCN; cell adhesion, AXON guidance, extracellular module, genetic disorder, corneal dystrophy; HET: NAG; 2.6A {Drosophila melanogaster} SCOP: b.118.1.1 b.118.1.1

Probab=99.76  E-value=6.5e-19  Score=166.83  Aligned_cols=120  Identities=9%  Similarity=0.130  Sum_probs=90.9

Q ss_pred             hcChHHHHHHHHH-h--hccccCCCceeEEEeCCCHHHhccC-----CChhhHHhhhcccccCCccchhcccccCCC--c
Q 043847          195 TEGYNVMASFLQL-Q--LVGFKDQTVVLTVFAPPDEAFQGYF-----GNFSEYSSIFLRHVVPCKISYQDLIDFDQG--T  264 (325)
Q Consensus       195 ~~gf~~~~~~L~~-~--~~~l~~~~~~~TvFAPtd~AF~~l~-----~~~~~l~~iL~yHvVp~~~~~~~L~~~~~g--~  264 (325)
                      ...|+.|..+|+. .  +.+.++..+++|||||+|+||+++.     .+.+.++++|+|||+|+++..++|.....+  .
T Consensus        21 ~~~~s~~~~~l~~ag~~l~~~L~~~~~~TvFAPtn~Af~~~~~~~l~~~~~~l~~iL~yHvv~g~~~~~~l~~~~~~~~~  100 (324)
T 1o70_A           21 NGALRKFYEVIMDNGGAVLDDINSLTEVTILAPSNEAWNSSNINNVLRDRNKMRQILNMHIIKDRLNVDKIRQKNANLIA  100 (324)
T ss_dssp             HHHHHHHHHHHHHTCSHHHHHHHTCSSEEEEEECHHHHHHTCTHHHHTCHHHHHHHHHHTEESSCCCHHHHHHHTSSSCC
T ss_pred             CCcHHHHHHHHHHHhHHHHHHHcCCCCeEEEEEChHhhhcccHhhhhCCHHHHHHHHHhcEeCCeecHHHHhhccCCCce
Confidence            3348888888854 3  4444455667999999999998763     356778999999999999999988764321  1


Q ss_pred             eeeeccCCcEEEEEEe----CCeEEEee----EEEecCccccCCCeEEEEeCCccCCCC
Q 043847          265 VLPTFLEGFKINVTKS----LKDLYLNN----VRVNDPSLYLNDWMFIHGVEKIVPEYV  315 (325)
Q Consensus       265 ~l~Tl~~g~~l~v~~~----~~~v~vng----~~V~~~di~~~~ngvIH~Id~VL~P~~  315 (325)
                      .++|+.++..+.++..    ++.+++||    ++|+.+|+. ++|||||+||+||.|+.
T Consensus       101 ~~~Tl~g~~~l~~~v~~~~~~~~v~v~~g~~~a~v~~~di~-~~NGvIhvID~VL~pp~  158 (324)
T 1o70_A          101 QVPTVNNNTFLYFNVRGEGSDTVITVEGGGVNATVIQADVA-QTNGYVHIIDHVLGVPY  158 (324)
T ss_dssp             CEEBSSTTCEEEEEEESCGGGCEEEEEETTEEEEEEEEEEE-CSSEEEEEESSCTTSCC
T ss_pred             EEEcCCCCceEEEEEeecCCceEEEEcCCceeEEEEecccc-ccCcEEEEEchhhhhch
Confidence            6888754433666544    23699986    899999965 67999999999999976

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	325
d1nyoa_	163	Immunogenic protein MPT70 {Mycobacterium tuberculo	99.89
d1o70a1	140	Fasciclin I {Fruit fly (Drosophila melanogaster) [	99.77
d1o70a2	157	Fasciclin I {Fruit fly (Drosophila melanogaster) [	99.77
d1nyoa_	163	Immunogenic protein MPT70 {Mycobacterium tuberculo	99.77
d1o70a1	140	Fasciclin I {Fruit fly (Drosophila melanogaster) [	99.62
d1o70a2	157	Fasciclin I {Fruit fly (Drosophila melanogaster) [	99.57

>d1nyoa_ b.118.1.1 (A:) Immunogenic protein MPT70 {Mycobacterium tuberculosis [TaxId: 1773]}

class: All beta proteins
fold: FAS1 domain
superfamily: FAS1 domain
family: FAS1 domain
domain: Immunogenic protein MPT70
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.89  E-value=5.1e-24  Score=181.29  Aligned_cols=119  Identities=22%  Similarity=0.204  Sum_probs=96.1

Q ss_pred             HHHHHhhc-ChHHHHHHHHHh------hccccCCCceeEEEeCCCHHHhccC--------CChhhHHhhhcccccCCccc
Q 043847          189 AVRYLTTE-GYNVMASFLQLQ------LVGFKDQTVVLTVFAPPDEAFQGYF--------GNFSEYSSIFLRHVVPCKIS  253 (325)
Q Consensus       189 ~~~~L~~~-gf~~~~~~L~~~------~~~l~~~~~~~TvFAPtd~AF~~l~--------~~~~~l~~iL~yHvVp~~~~  253 (325)
                      +...+++. .|++|..++.+.      +.+.++ .||||||||+|+||++++        .+.+.++++|+|||+|+++.
T Consensus        30 v~~~a~~~p~lstl~~Al~a~~~~~a~L~~~L~-~gpfTvFAPtn~AF~~l~~~~~~~l~~~~~~L~~iL~yHVv~g~~~  108 (163)
T d1nyoa_          30 VAVAASNNPELTTLTAALSGQLNPQVNLVDTLN-SGQYTVFAPTNAAFSKLPASTIDELKTNSSLLTSILTYHVVAGQTS  108 (163)
T ss_dssp             HHHHHTTSTTTHHHHHHHHSSSCTTCCCHHHHT-SSSEEECCBCHHHHHHSCHHHHHHHTTCSSHHHHHHHHTEEESCCC
T ss_pred             HHHHHhcCCchHHHHHHHhhccccccchhHhhc-CCCeEEEEECcHHHHhcCHHHHHhhhhhHHHHHHhhhhhhhhhhhh
Confidence            44555544 399999888642      323334 377999999999999874        34567899999999999999


Q ss_pred             hhcccccCCCceeeeccCCcEEEEEEeCCeEEEeeEEEecCccccCCCeEEEEeCCccCCCC
Q 043847          254 YQDLIDFDQGTVLPTFLEGFKINVTKSLKDLYLNNVRVNDPSLYLNDWMFIHGVEKIVPEYV  315 (325)
Q Consensus       254 ~~~L~~~~~g~~l~Tl~~g~~l~v~~~~~~v~vng~~V~~~di~~~~ngvIH~Id~VL~P~~  315 (325)
                      .+++..     .++|+ .|..+.|+..++.++||+++|+.+|+. ++|||||+||+||+||.
T Consensus       109 ~~~l~~-----~~~Tl-~G~~l~v~~~~~~i~v~~a~Vv~~di~-a~NGvIHvID~VLlPPa  163 (163)
T d1nyoa_         109 PANVVG-----TRQTL-QGASVTVTGQGNSLKVGNADVVCGGVS-TANATVYMIDSVLMPPA  163 (163)
T ss_dssp             TTTSCE-----EEECT-TSSEEEEEECSSCEEETTEECSSBCCC-CSSEEEBCBSSCCCCCC
T ss_pred             hhhhhh-----hhhhc-cCcceeEEecCCEEEEeceEEEECCee-cCCcEEEEECccccCCC
Confidence            888753     36675 799999999999999999999999965 67999999999999984

>d1o70a1 b.118.1.1 (A:328-467) Fasciclin I {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: All beta proteins
fold: FAS1 domain
superfamily: FAS1 domain
family: FAS1 domain
domain: Fasciclin I
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=99.77  E-value=2.9e-19  Score=146.80  Aligned_cols=116  Identities=11%  Similarity=0.137  Sum_probs=80.6

Q ss_pred             hHHHHHHHHHh---h-ccccCCCceeEEEeCCCHHHhccCC-----ChhhHHhhhcccccCCccchhcccccCC--Ccee
Q 043847          198 YNVMASFLQLQ---L-VGFKDQTVVLTVFAPPDEAFQGYFG-----NFSEYSSIFLRHVVPCKISYQDLIDFDQ--GTVL  266 (325)
Q Consensus       198 f~~~~~~L~~~---~-~~l~~~~~~~TvFAPtd~AF~~l~~-----~~~~l~~iL~yHvVp~~~~~~~L~~~~~--g~~l  266 (325)
                      |+.|..+++..   + +.+...+ ++|+|||+|+||+++..     +.+.++++|+|||+|+++..+++.....  ...+
T Consensus         6 ~~~f~~~i~~~g~~~~~~l~~~~-~~TvFAPtn~Af~~~~~~~~~~~~~~l~~~l~yHiv~~~~~~~~l~~~~~~~~~~~   84 (140)
T d1o70a1           6 LRKFYEVIMDNGGAVLDDINSLT-EVTILAPSNEAWNSSNINNVLRDRNKMRQILNMHIIKDRLNVDKIRQKNANLIAQV   84 (140)
T ss_dssp             HHHHHHHHHHTCSHHHHHHHTCS-SEEEEEECHHHHHHTCTHHHHTCHHHHHHHHHHTEESSCCCHHHHHHHTSSSCCCE
T ss_pred             HHHHHHHHHHHHHHHHHHhcCCC-CEEEEEECHHHHhcCChhhhcCCHHHHHHHHHhhccCCeEEHHHHhcCcccCceEe
Confidence            55555555432   1 2234444 49999999999988752     4567899999999999999888865422  2346


Q ss_pred             eeccCCcEEEEEEeCC----eEEEe----eEEEecCccccCCCeEEEEeCCccCCCC
Q 043847          267 PTFLEGFKINVTKSLK----DLYLN----NVRVNDPSLYLNDWMFIHGVEKIVPEYV  315 (325)
Q Consensus       267 ~Tl~~g~~l~v~~~~~----~v~vn----g~~V~~~di~~~~ngvIH~Id~VL~P~~  315 (325)
                      +|+..+....+...++    .+.++    .++|+.+|+. +.|||||+||+||.||.
T Consensus        85 ~t~~g~~~~~~~~~~~~~~~~~~~~~~~~~a~V~~~Di~-~~NGvIH~ID~VL~~P~  140 (140)
T d1o70a1          85 PTVNNNTFLYFNVRGEGSDTVITVEGGGVNATVIQADVA-QTNGYVHIIDHVLGVPY  140 (140)
T ss_dssp             EBSSTTCEEEEEEESCGGGCEEEEEETTEEEEEEEEEEE-CSSEEEEEESSCTTSCC
T ss_pred             eecCCCceEEEEEeccceeEEEEecCCcceEEEEeCCEe-cCCeEEEEECCccCCcC
Confidence            7775444444443322    35543    4899999976 67999999999999983

>d1o70a2 b.118.1.1 (A:468-624) Fasciclin I {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: All beta proteins
fold: FAS1 domain
superfamily: FAS1 domain
family: FAS1 domain
domain: Fasciclin I
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=99.77  E-value=1.9e-19  Score=151.05  Aligned_cols=127  Identities=17%  Similarity=0.202  Sum_probs=85.3

Q ss_pred             HHHHHhhcC-hHHHHHHHHH-hhcc-ccCCCceeEEEeCCCHHHhccCC-------------ChhhHHhhhcccccCCcc
Q 043847          189 AVRYLTTEG-YNVMASFLQL-QLVG-FKDQTVVLTVFAPPDEAFQGYFG-------------NFSEYSSIFLRHVVPCKI  252 (325)
Q Consensus       189 ~~~~L~~~g-f~~~~~~L~~-~~~~-l~~~~~~~TvFAPtd~AF~~l~~-------------~~~~l~~iL~yHvVp~~~  252 (325)
                      +++.+++.. |+.|..+++. .+.+ +....+++|+|||+|+||+++..             +.+.++++|+|||+|+..
T Consensus         3 i~~~l~~~p~ls~~~~~~~~s~l~~~L~~~~~~~TvFaPtn~Af~~l~~~~~~~~~~~~~~~~~~~l~~il~~Hiv~g~~   82 (157)
T d1o70a2           3 VLGKLESDPMMSDTYKMGKFSHFNDQLNNTQRRFTYFVPRDKGWQKTELDYPSAHKKLFMADFSYHSKSILERHLAISDK   82 (157)
T ss_dssp             HHHHHHHCGGGHHHHHHTTTTTTTGGGGCSSSEEEEEEECHHHHHHHHHHCHHHHHHHTSGGGHHHHHHHHHTTEEEESS
T ss_pred             HHHHHHhCccHHHHHHHHHhCCHHHHHhCCCCceEEEecCHHHHHHhhhhccchhhhhcCcccHHHHHHHheeEEecccc
Confidence            566676554 8888877653 3333 44455679999999999998731             134578999999999865


Q ss_pred             chhcc--cc---cCCCceeeeccCCcEEEEEEeCCeEEE----eeEEEecCccccCCCeEEEEeCCccCCCCC
Q 043847          253 SYQDL--ID---FDQGTVLPTFLEGFKINVTKSLKDLYL----NNVRVNDPSLYLNDWMFIHGVEKIVPEYVP  316 (325)
Q Consensus       253 ~~~~L--~~---~~~g~~l~Tl~~g~~l~v~~~~~~v~v----ng~~V~~~di~~~~ngvIH~Id~VL~P~~~  316 (325)
                      .+.+.  .+   ...+...+++.....+.+...++.+.+    |+++|+.+|+. +.|||||+||+||+|+..
T Consensus        83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~V~~~Di~-a~NGviHvID~VLlp~~d  154 (157)
T d1o70a2          83 EYTMKDLVKFSQESGSVILPTFRDSLSIRVEEEAGRYVIIWNYKKINVYRPDVE-CTNGIIHVIDYPLLEEKD  154 (157)
T ss_dssp             CCCHHHHHHHHHHSSSEEEECSSSEEEEEEEEETTEEEEEETTEEEEEEEEEEE-ETTEEEEEESSCSCCTTT
T ss_pred             cchhhhhhhhhccCCceeEEecCCcEEEEEEcCCcEEEEecCCccceEEECCEe-cCCeEEEEECceecCCCC
Confidence            43322  11   111233444422344445666666655    66999999976 579999999999999754

>d1nyoa_ b.118.1.1 (A:) Immunogenic protein MPT70 {Mycobacterium tuberculosis [TaxId: 1773]}

class: All beta proteins
fold: FAS1 domain
superfamily: FAS1 domain
family: FAS1 domain
domain: Immunogenic protein MPT70
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.77  E-value=1.6e-19  Score=153.16  Aligned_cols=117  Identities=16%  Similarity=0.206  Sum_probs=89.2

Q ss_pred             hcHHHHHHhCCc-hhHHHHHhh-----cccc-CCCCCCCeEEEeeCcHHHhcCCC---------Cc-H-HHhhhcccCCc
Q 043847           27 SDAVEILSNSGY-LSMALTLEF-----GSKF-LTPPSPSLTIFSPSDSAFASFGQ---------PS-L-ALLQLHFSPLS   88 (325)
Q Consensus        27 ~ni~~iL~~~g~-~s~~~~l~~-----~~~~-~l~~~~~~TvFAPtd~Af~~~~~---------~~-l-~lL~yHvv~g~   88 (325)
                      .++...+++... .++..+++.     ++-. .++ .|+||||||+|+||.+++.         +. + ++|+|||++|+
T Consensus        28 ~~v~~~a~~~p~lstl~~Al~a~~~~~a~L~~~L~-~gpfTvFAPtn~AF~~l~~~~~~~l~~~~~~L~~iL~yHVv~g~  106 (163)
T d1nyoa_          28 DPVAVAASNNPELTTLTAALSGQLNPQVNLVDTLN-SGQYTVFAPTNAAFSKLPASTIDELKTNSSLLTSILTYHVVAGQ  106 (163)
T ss_dssp             SCHHHHHTTSTTTHHHHHHHHSSSCTTCCCHHHHT-SSSEEECCBCHHHHHHSCHHHHHHHTTCSSHHHHHHHHTEEESC
T ss_pred             chHHHHHhcCCchHHHHHHHhhccccccchhHhhc-CCCeEEEEECcHHHHhcCHHHHHhhhhhHHHHHHhhhhhhhhhh
Confidence            356777777664 445556653     2211 234 3899999999999999852         11 3 99999999999


Q ss_pred             cccccccCCCCCCeeecccCCceEEEEEcCCCCeEEEccEEEecCccc-cCCCeEEEEeCCccCCCc
Q 043847           89 FPSTFMKTLPYHAKIPTMSPNHTLIVTSLPSDDQVSLNGVKINQPEIY-DDGSLRIFGIETFLDPDY  154 (325)
Q Consensus        89 ~~~~~L~~~~~g~~l~Tll~g~~l~vt~~~~~~~v~vng~~I~~~di~-~~G~~vvH~Id~vL~P~~  154 (325)
                      +..+++..     .++| +.|..++|+..  ++.+++|+++|+++|+. .||  |||+||+||.||.
T Consensus       107 ~~~~~l~~-----~~~T-l~G~~l~v~~~--~~~i~v~~a~Vv~~di~a~NG--vIHvID~VLlPPa  163 (163)
T d1nyoa_         107 TSPANVVG-----TRQT-LQGASVTVTGQ--GNSLKVGNADVVCGGVSTANA--TVYMIDSVLMPPA  163 (163)
T ss_dssp             CCTTTSCE-----EEEC-TTSSEEEEEEC--SSCEEETTEECSSBCCCCSSE--EEBCBSSCCCCCC
T ss_pred             hhhhhhhh-----hhhh-ccCcceeEEec--CCEEEEeceEEEECCeecCCc--EEEEECccccCCC
Confidence            99998852     4556 57899999986  45799999999999986 677  9999999999973

>d1o70a1 b.118.1.1 (A:328-467) Fasciclin I {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: All beta proteins
fold: FAS1 domain
superfamily: FAS1 domain
family: FAS1 domain
domain: Fasciclin I
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=99.62  E-value=6.2e-17  Score=132.65  Aligned_cols=114  Identities=16%  Similarity=0.208  Sum_probs=76.4

Q ss_pred             chhHHHHHhhcc-cc--CCCCCCCeEEEeeCcHHHhcCCCCc-------H-HHhhhcccCCccccccccCCCC--CCeee
Q 043847           38 YLSMALTLEFGS-KF--LTPPSPSLTIFSPSDSAFASFGQPS-------L-ALLQLHFSPLSFPSTFMKTLPY--HAKIP  104 (325)
Q Consensus        38 ~~s~~~~l~~~~-~~--~l~~~~~~TvFAPtd~Af~~~~~~~-------l-~lL~yHvv~g~~~~~~L~~~~~--g~~l~  104 (325)
                      +..|+.+++..+ +.  .+...+++|+|||+|+||.++....       + .+|+||++++++..++|.....  ...++
T Consensus         6 ~~~f~~~i~~~g~~~~~~l~~~~~~TvFAPtn~Af~~~~~~~~~~~~~~l~~~l~yHiv~~~~~~~~l~~~~~~~~~~~~   85 (140)
T d1o70a1           6 LRKFYEVIMDNGGAVLDDINSLTEVTILAPSNEAWNSSNINNVLRDRNKMRQILNMHIIKDRLNVDKIRQKNANLIAQVP   85 (140)
T ss_dssp             HHHHHHHHHHTCSHHHHHHHTCSSEEEEEECHHHHHHTCTHHHHTCHHHHHHHHHHTEESSCCCHHHHHHHTSSSCCCEE
T ss_pred             HHHHHHHHHHHHHHHHHHhcCCCCEEEEEECHHHHhcCChhhhcCCHHHHHHHHHhhccCCeEEHHHHhcCcccCceEee
Confidence            455666655433 11  1334578999999999999875332       2 8999999999999999864321  23466


Q ss_pred             cccCCceEEEEEcCC--CCeEEEc----cEEEecCccc-cCCCeEEEEeCCccCCC
Q 043847          105 TMSPNHTLIVTSLPS--DDQVSLN----GVKINQPEIY-DDGSLRIFGIETFLDPD  153 (325)
Q Consensus       105 Tll~g~~l~vt~~~~--~~~v~vn----g~~I~~~di~-~~G~~vvH~Id~vL~P~  153 (325)
                      |+..+....++...+  ...+.++    .++|+++|+. .||  |||+||+||.||
T Consensus        86 t~~g~~~~~~~~~~~~~~~~~~~~~~~~~a~V~~~Di~~~NG--vIH~ID~VL~~P  139 (140)
T d1o70a1          86 TVNNNTFLYFNVRGEGSDTVITVEGGGVNATVIQADVAQTNG--YVHIIDHVLGVP  139 (140)
T ss_dssp             BSSTTCEEEEEEESCGGGCEEEEEETTEEEEEEEEEEECSSE--EEEEESSCTTSC
T ss_pred             ecCCCceEEEEEeccceeEEEEecCCcceEEEEeCCEecCCe--EEEEECCccCCc
Confidence            765444444443322  2234443    3789999985 576  999999999987

>d1o70a2 b.118.1.1 (A:468-624) Fasciclin I {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: All beta proteins
fold: FAS1 domain
superfamily: FAS1 domain
family: FAS1 domain
domain: Fasciclin I
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=99.57  E-value=7.5e-16  Score=128.68  Aligned_cols=124  Identities=15%  Similarity=0.191  Sum_probs=77.8

Q ss_pred             cHHHHHHhCCchh-HHHHHhhcc--ccCCCCCCCeEEEeeCcHHHhcCCC-----------Cc----H-HHhhhcccCCc
Q 043847           28 DAVEILSNSGYLS-MALTLEFGS--KFLTPPSPSLTIFSPSDSAFASFGQ-----------PS----L-ALLQLHFSPLS   88 (325)
Q Consensus        28 ni~~iL~~~g~~s-~~~~l~~~~--~~~l~~~~~~TvFAPtd~Af~~~~~-----------~~----l-~lL~yHvv~g~   88 (325)
                      .+.++|+..+..+ +..+++.++  +.+....+++|+|||+|+||.++..           +.    + .+|+||+++|.
T Consensus         2 Ti~~~l~~~p~ls~~~~~~~~s~l~~~L~~~~~~~TvFaPtn~Af~~l~~~~~~~~~~~~~~~~~~~l~~il~~Hiv~g~   81 (157)
T d1o70a2           2 TVLGKLESDPMMSDTYKMGKFSHFNDQLNNTQRRFTYFVPRDKGWQKTELDYPSAHKKLFMADFSYHSKSILERHLAISD   81 (157)
T ss_dssp             CHHHHHHHCGGGHHHHHHTTTTTTTGGGGCSSSEEEEEEECHHHHHHHHHHCHHHHHHHTSGGGHHHHHHHHHTTEEEES
T ss_pred             cHHHHHHhCccHHHHHHHHHhCCHHHHHhCCCCceEEEecCHHHHHHhhhhccchhhhhcCcccHHHHHHHheeEEeccc
Confidence            4667788776444 555666544  2233455799999999999998631           11    2 78999999987


Q ss_pred             cccccccC-----CCCCCeeecccCCceEEEEEcCCCCeEEE----ccEEEecCccc-cCCCeEEEEeCCccCCCcc
Q 043847           89 FPSTFMKT-----LPYHAKIPTMSPNHTLIVTSLPSDDQVSL----NGVKINQPEIY-DDGSLRIFGIETFLDPDYS  155 (325)
Q Consensus        89 ~~~~~L~~-----~~~g~~l~Tll~g~~l~vt~~~~~~~v~v----ng~~I~~~di~-~~G~~vvH~Id~vL~P~~~  155 (325)
                      ....+...     .......+++..+..+.+...  ++.+.+    ++++|+++|+. .||  +||+||+||.|+..
T Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~a~V~~~Di~a~NG--viHvID~VLlp~~d  154 (157)
T d1o70a2          82 KEYTMKDLVKFSQESGSVILPTFRDSLSIRVEEE--AGRYVIIWNYKKINVYRPDVECTNG--IIHVIDYPLLEEKD  154 (157)
T ss_dssp             SCCCHHHHHHHHHHSSSEEEECSSSEEEEEEEEE--TTEEEEEETTEEEEEEEEEEEETTE--EEEEESSCSCCTTT
T ss_pred             ccchhhhhhhhhccCCceeEEecCCcEEEEEEcC--CcEEEEecCCccceEEECCEecCCe--EEEEECceecCCCC
Confidence            64433210     111222334322223444443  334443    46899999986 677  99999999999754