Citrus Sinensis ID: 043883

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------35
MAKYFLIVVLIISGSCASQATYRTFDEGSIAEKFEQWKAQYGRTYKESAENSKRFEIFKDNLVAVERFNNAAIGNRSYTLRLNKFADLTPQEFIASQTGFKMSDHSSSLKANGTPFLYKSSQVPPSVNWIEKGAVTPVKYQGQCAVAAVEGINAIKINRLVSLSEQQLVDCATNDNNNGCYGGFMDDAFKYIIQNKGITNDAVYSYEGMSTGICDSIKAEDHAAQITNYEDVPPNDEESLLKAVANQPVSVAIDASALQFYSGGVFNGYCETFLNHGVTAVGYGTSEEGIKYWLIKNSWGQDWGEDGYFRLQRDIDQPQGQCGIAMFASFPVSKESAQPSSADKSSAC
cHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHcccccccEEEcccccccccHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHccccccccHHHHcccccccccccccccHHHHHHHHHHcccccccccccccccccccccccccccccEEEccEEEcccccHHHHHHHHHcccEEEEEEcccccccccccccccccccccEEEEEEEEcccccccEEEEEEcccccccccccEEEEEcccccccccccccccccccccccccccccccccccc
cHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccEEEEEcccccccHHHHHHHHcccccccccccccccccccccccccccccEEHHHHcccccccEccccHHHHHHHHHHHHHcccccEcHHHHHHHcHHHcccccEcccHHHHHHHHHHHccEEEcccccccccccccccHccccccEEcccEEEEcccccHHHHHHHHccccEEEEEccccHHHccccEEcccccccccEEEEEEEEEEEEccEEEEEEEccEcccccEccEEEEEccccccccHHHcccccEEEEcccccccccccccccc
MAKYFLIVVLIISgscasqatyrtfdegsiAEKFEQWKAQYGRTYKESAENSKRFEIFKDNLVAVERFNnaaignrsYTLRLnkfadltpqefiasqtgfkmsdhssslkangtpflykssqvppsvnwiekgavtpvkyQGQCAVAAVEGINAIKINRLVSLSEQQLvdcatndnnngcyggfmDDAFKYIIQNkgitndavysyegmstgicdsikaedhaaqitnyedvppndeESLLKAVANQPVSVAIDASALQFYSGGVFNGYCETFLNHGvtavgygtseeGIKYWLIKNswgqdwgedgyfrlqrdidqpqgqcgiamfasfpvskesaqpssadkssac
MAKYFLIVVLIisgscasqatYRTFDEGSIAEKFEQWKAQYGRTykesaenskrFEIFKDNLVAVERFNNAAIGNRSYTLRLNKFADLTPQEFIASQTGFKMSDHSSSLKANGTPFLYKSSQVPPSVNWIEKGAVTPVKYQGQCAVAAVEGINAIKINRLVSLSEQQLVDCATNDNNNGCYGGFMDDAFKYIIQNKGITNDAVYSYEGMSTGICDSIKAEDHAAQITNYEDVPPNDEESLLKAVANQPVSVAIDASALQFYSGGVFNGYCETFLNHGVTAVGYGTSEEGIKYWLIKNSWGQDWGEDGYFRLQRDIDQPQGQCGIAMFASFPVSkesaqpssadkssac
MAKYFLIVVLIISGSCASQATYRTFDEGSIAEKFEQWKAQYGRTYKESAENSKRFEIFKDNLVAVERFNNAAIGNRSYTLRLNKFADLTPQEFIASQTGFKMSDHSSSLKANGTPFLYKSSQVPPSVNWIEKGAVTPVKYQGQCAVAAVEGINAIKINRLVSLSEQQLVDCATNDNNNGCYGGFMDDAFKYIIQNKGITNDAVYSYEGMSTGICDSIKAEDHAAQITNYEDVPPNDEESLLKAVANQPVSVAIDASALQFYSGGVFNGYCETFLNHGVTAVGYGTSEEGIKYWLIKNSWGQDWGEDGYFRLQRDIDQPQGQCGIAMFASFPVSKESAQPSSADKSSAC
**KYFLIVVLIISGSCASQATYRTFDEGSIAEKFEQWKAQYGRTYKESAENSKRFEIFKDNLVAVERFNNAAIGNRSYTLRLNKFADLTPQEFIAS*******************FLYKS*QVPPSVNWIEKGAVTPVKYQGQCAVAAVEGINAIKINRLVSLSEQQLVDCATNDNNNGCYGGFMDDAFKYIIQNKGITNDAVYSYEGMSTGICDSIKAEDHAAQITNY**********LLKAVANQPVSVAIDASALQFYSGGVFNGYCETFLNHGVTAVGYGTSEEGIKYWLIKNSWGQDWGEDGYFRLQRDIDQPQGQCGIAMFASF******************
MAKYFLIVVLIISGSCASQATYRTFDEGSIAEKFEQWKAQYGRTYKESAENSKRFEIFKDNLVAVERFNNAAIGNRSYTLRLNKFADLTPQEFIASQTG********************SSQVPPSVNWIEKGAVTPVKYQGQCAVAAVEGINAIKINRLVSLSEQQLVDCATNDNNNGCYGGFMDDAFKYIIQNKGITNDAVYSYEGMSTGICDSIKAEDHAAQITNYEDVPPNDEESLLKAVANQPVSVAIDASALQFYSGGVFNGYCETFLNHGVTAVGYGTSEEGIKYWLIKNSWGQDWGEDGYFRLQRDIDQPQGQCGIAMFASFPVSKES************
MAKYFLIVVLIISGSCASQATYRTFDEGSIAEKFEQWKAQYGRTYKESAENSKRFEIFKDNLVAVERFNNAAIGNRSYTLRLNKFADLTPQEFIASQTGFKMSDHSSSLKANGTPFLYKSSQVPPSVNWIEKGAVTPVKYQGQCAVAAVEGINAIKINRLVSLSEQQLVDCATNDNNNGCYGGFMDDAFKYIIQNKGITNDAVYSYEGMSTGICDSIKAEDHAAQITNYEDVPPNDEESLLKAVANQPVSVAIDASALQFYSGGVFNGYCETFLNHGVTAVGYGTSEEGIKYWLIKNSWGQDWGEDGYFRLQRDIDQPQGQCGIAMFASFP*****************
MAKYFLIVVLIISGSCASQATYRTFDEGSIAEKFEQWKAQYGRTYKESAENSKRFEIFKDNLVAVERFNNAAIGNRSYTLRLNKFADLTPQEFIASQTGFK*************PFLYKSSQVPPSVNWIEKGAVTPVKYQGQCAVAAVEGINAIKINRLVSLSEQQLVDCATNDNNNGCYGGFMDDAFKYIIQNKGITNDAVYSYEGMSTGICDSIKAEDHAAQITNYEDVPPNDEESLLKAVANQPVSVAIDASALQFYSGGVFNGYCETFLNHGVTAVGYGTSEEGIKYWLIKNSWGQDWGEDGYFRLQRDIDQPQGQCGIAMFASFPVSKE*************
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
SSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MAKYFLIVVLIISGSCASQATYRTFDEGSIAEKFEQWKAQYGRTYKESAENSKRFEIFKDNLVAVERFNNAAIGNRSYTLRLNKFADLTPQEFIASQTGFKMSDHSSSLKANGTPFLYKSSQVPPSVNWIEKGAVTPVKYQGQCAVAAVEGINAIKINRLVSLSEQQLVDCATNDNNNGCYGGFMDDAFKYIIQNKGITNDAVYSYEGMSTGICDSIKAEDHAAQITNYEDVPPNDEESLLKAVANQPVSVAIDASALQFYSGGVFNGYCETFLNHGVTAVGYGTSEEGIKYWLIKNSWGQDWGEDGYFRLQRDIDQPQGQCGIAMFASFPVSKESAQPSSADKSSAC
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query348 2.2.26 [Sep-21-2011]
Q9STL4361 KDEL-tailed cysteine endo yes no 0.954 0.919 0.477 2e-83
P25803362 Vignain OS=Phaseolus vulg N/A no 0.954 0.917 0.468 2e-81
P12412362 Vignain OS=Vigna mungo PE N/A no 0.890 0.856 0.484 4e-81
O65039360 Vignain OS=Ricinus commun N/A no 0.879 0.85 0.509 8e-81
Q9FGR9361 KDEL-tailed cysteine endo no no 0.879 0.847 0.478 8e-79
Q9STL5364 KDEL-tailed cysteine endo no no 0.962 0.920 0.440 4e-76
P43156360 Thiol protease SEN102 OS= N/A no 0.962 0.930 0.437 6e-73
O65493355 Xylem cysteine proteinase no no 0.850 0.833 0.479 6e-73
Q9LM66356 Xylem cysteine proteinase no no 0.853 0.834 0.476 2e-72
P25250373 Cysteine proteinase EP-B N/A no 0.887 0.828 0.453 7e-71
>sp|Q9STL4|CEP2_ARATH KDEL-tailed cysteine endopeptidase CEP2 OS=Arabidopsis thaliana GN=CEP2 PE=2 SV=1 Back     alignment and function desciption
 Score =  309 bits (791), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 169/354 (47%), Positives = 224/354 (63%), Gaps = 22/354 (6%)

Query: 5   FLIVVLIISGSCASQATYRTFD-EGSIAEKFEQWKAQYGRTYKESAENSKRFEIFKDNLV 63
           FL  ++I+  +C      +  + E  ++  +++W++ +    +   E  KRF +F+ N++
Sbjct: 8   FLFSLVILQTACGFDYDDKEIESEEGLSTLYDRWRSHHS-VPRSLNEREKRFNVFRHNVM 66

Query: 64  AVERFNNAAIGNRSYTLRLNKFADLTPQEFIASQTGFKMSDHS--SSLKANGTPFLYKS- 120
            V   N     NRSY L+LNKFADLT  EF  + TG  +  H      K     F+Y   
Sbjct: 67  HVHNTNKK---NRSYKLKLNKFADLTINEFKNAYTGSNIKHHRMLQGPKRGSKQFMYDHE 123

Query: 121 --SQVPPSVNWIEKGAVTPVKYQGQCA-------VAAVEGINAIKINRLVSLSEQQLVDC 171
             S++P SV+W +KGAVT +K QG+C        VAAVEGIN IK N+LVSLSEQ+LVDC
Sbjct: 124 NLSKLPSSVDWRKKGAVTEIKNQGKCGSCWAFSTVAAVEGINKIKTNKLVSLSEQELVDC 183

Query: 172 ATNDNNNGCYGGFMDDAFKYIIQNKGITNDAVYSYEGMSTGICDSIKAEDHAAQITNYED 231
            T   N GC GG M+ AF++I +N GIT +  Y YEG+  G CD+ K       I  +ED
Sbjct: 184 DTK-QNEGCNGGLMEIAFEFIKKNGGITTEDSYPYEGID-GKCDASKDNGVLVTIDGHED 241

Query: 232 VPPNDEESLLKAVANQPVSVAIDA--SALQFYSGGVFNGYCETFLNHGVTAVGYGTSEEG 289
           VP NDE +LLKAVANQPVSVAIDA  S  QFYS GVF G C T LNHGV AVGYG SE G
Sbjct: 242 VPENDENALLKAVANQPVSVAIDAGSSDFQFYSEGVFTGSCGTELNHGVAAVGYG-SERG 300

Query: 290 IKYWLIKNSWGQDWGEDGYFRLQRDIDQPQGQCGIAMFASFPVSKESAQPSSAD 343
            KYW+++NSWG +WGE GY +++R+ID+P+G+CGIAM AS+P+   S+ P+  D
Sbjct: 301 KKYWIVRNSWGAEWGEGGYIKIEREIDEPEGRCGIAMEASYPIKLSSSNPTPKD 354
Involved in the final stage of developmental programmed cell death and in intercalation of new cells. Cleaves extensins, thus probably supporing the final cell collapse.
Arabidopsis thaliana (taxid: 3702)
EC: 3EC: .EC: 4EC: .EC: 2EC: 2EC: .EC: -
>sp|P25803|CYSEP_PHAVU Vignain OS=Phaseolus vulgaris PE=2 SV=2 Back     alignment and function description
>sp|P12412|CYSEP_VIGMU Vignain OS=Vigna mungo PE=1 SV=1 Back     alignment and function description
>sp|O65039|CYSEP_RICCO Vignain OS=Ricinus communis GN=CYSEP PE=1 SV=1 Back     alignment and function description
>sp|Q9FGR9|CEP1_ARATH KDEL-tailed cysteine endopeptidase CEP1 OS=Arabidopsis thaliana GN=CEP1 PE=2 SV=1 Back     alignment and function description
>sp|Q9STL5|CEP3_ARATH KDEL-tailed cysteine endopeptidase CEP3 OS=Arabidopsis thaliana GN=CEP3 PE=2 SV=1 Back     alignment and function description
>sp|P43156|CYSP_HEMSP Thiol protease SEN102 OS=Hemerocallis sp. GN=SEN102 PE=2 SV=1 Back     alignment and function description
>sp|O65493|XCP1_ARATH Xylem cysteine proteinase 1 OS=Arabidopsis thaliana GN=XCP1 PE=1 SV=1 Back     alignment and function description
>sp|Q9LM66|XCP2_ARATH Xylem cysteine proteinase 2 OS=Arabidopsis thaliana GN=XCP2 PE=1 SV=2 Back     alignment and function description
>sp|P25250|CYSP2_HORVU Cysteine proteinase EP-B 2 OS=Hordeum vulgare GN=EPB2 PE=1 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query348
255564908342 cysteine protease, putative [Ricinus com 0.931 0.947 0.530 3e-96
225446583341 PREDICTED: KDEL-tailed cysteine endopept 0.931 0.950 0.530 1e-95
147788834341 hypothetical protein VITISV_005140 [Viti 0.931 0.950 0.527 2e-95
37780045343 cysteine protease 5 [Trifolium repens] 0.928 0.941 0.540 3e-95
225446581341 PREDICTED: vignain [Vitis vinifera] 0.931 0.950 0.527 5e-95
255564910341 cysteine protease, putative [Ricinus com 0.933 0.953 0.527 7e-95
147839728341 hypothetical protein VITISV_032465 [Viti 0.931 0.950 0.527 9e-95
37780051343 cysteine protease 12 [Trifolium repens] 0.925 0.938 0.542 1e-94
255563110344 cysteine protease, putative [Ricinus com 0.933 0.944 0.530 3e-94
359485281341 PREDICTED: LOW QUALITY PROTEIN: KDEL-tai 0.931 0.950 0.521 4e-94
>gi|255564908|ref|XP_002523447.1| cysteine protease, putative [Ricinus communis] gi|223537275|gb|EEF38906.1| cysteine protease, putative [Ricinus communis] Back     alignment and taxonomy information
 Score =  358 bits (918), Expect = 3e-96,   Method: Compositional matrix adjust.
 Identities = 180/339 (53%), Positives = 240/339 (70%), Gaps = 15/339 (4%)

Query: 5   FLIVVLIISGSCASQATYRTFDEGSIAEKFEQWKAQYGRTYKESAENSKRFEIFKDNLVA 64
            + V L++ G  ASQA  R+  + ++ E+ E W A+YGR YK+++E  +RFEIF++N+  
Sbjct: 9   LMFVALLVVGLWASQAWSRSLHDAAMNERHEMWMAKYGRVYKDNSEKERRFEIFRNNVEF 68

Query: 65  VERFNNAAIGNRSYTLRLNKFADLTPQEFIASQTGFKMSDHSSSLKANGTPFLYKS-SQV 123
           +E FN   +GNR Y L +N+FADLT +EF  S+ G+K S  S       + F Y + + V
Sbjct: 69  IESFNK--LGNRPYKLDINEFADLTNEEFKVSKNGYKRS--SGVGLTEKSSFRYANVTAV 124

Query: 124 PPSVNWIEKGAVTPVKYQGQC-------AVAAVEGINAIKINRLVSLSEQQLVDCATNDN 176
           P S++W + GAVTP+K QGQC       AVAA+EGI  +   +L+SLSEQ+LVDC T+  
Sbjct: 125 PTSMDWRQNGAVTPIKDQGQCGCCWAFSAVAAMEGITKLSTGKLISLSEQELVDCDTSGE 184

Query: 177 NNGCYGGFMDDAFKYIIQNKGITNDAVYSYEGMSTGICDSIKAEDHAAQITNYEDVPPND 236
           + GC GG MDDAF++I QN G+T +A Y Y+G + G C++ KA + AA+IT YEDVP N 
Sbjct: 185 DQGCEGGLMDDAFEFIKQNGGLTTEANYPYQG-TDGTCNTNKAGNDAAKITGYEDVPANS 243

Query: 237 EESLLKAVANQPVSVAIDAS--ALQFYSGGVFNGYCETFLNHGVTAVGYGTSEEGIKYWL 294
           E++LLKAVA+QPVSVAIDAS  A QFYSGGVF G C T L+HGVTAVGYGTS++G KYWL
Sbjct: 244 EDALLKAVASQPVSVAIDASGSAFQFYSGGVFTGDCGTELDHGVTAVGYGTSDDGTKYWL 303

Query: 295 IKNSWGQDWGEDGYFRLQRDIDQPQGQCGIAMFASFPVS 333
           +KNSWG  WGEDGY R++RDI+  +G CGIAM  S+P +
Sbjct: 304 VKNSWGTSWGEDGYIRMERDIEAKEGLCGIAMQPSYPTA 342

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|225446583|ref|XP_002280204.1| PREDICTED: KDEL-tailed cysteine endopeptidase CEP1 [Vitis vinifera] Back     alignment and taxonomy information
>gi|147788834|emb|CAN64655.1| hypothetical protein VITISV_005140 [Vitis vinifera] Back     alignment and taxonomy information
>gi|37780045|gb|AAP32195.1| cysteine protease 5 [Trifolium repens] Back     alignment and taxonomy information
>gi|225446581|ref|XP_002280246.1| PREDICTED: vignain [Vitis vinifera] Back     alignment and taxonomy information
>gi|255564910|ref|XP_002523448.1| cysteine protease, putative [Ricinus communis] gi|223537276|gb|EEF38907.1| cysteine protease, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|147839728|emb|CAN70559.1| hypothetical protein VITISV_032465 [Vitis vinifera] Back     alignment and taxonomy information
>gi|37780051|gb|AAP32198.1| cysteine protease 12 [Trifolium repens] Back     alignment and taxonomy information
>gi|255563110|ref|XP_002522559.1| cysteine protease, putative [Ricinus communis] gi|223538250|gb|EEF39859.1| cysteine protease, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|359485281|ref|XP_002280230.2| PREDICTED: LOW QUALITY PROTEIN: KDEL-tailed cysteine endopeptidase CEP1 [Vitis vinifera] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query348
TAIR|locus:2082881341 AT3G49340 [Arabidopsis thalian 0.925 0.944 0.485 1.8e-78
TAIR|locus:2055440345 AT2G34080 [Arabidopsis thalian 0.925 0.933 0.495 7.9e-78
TAIR|locus:2152445346 SAG12 "senescence-associated g 0.925 0.930 0.483 7.9e-78
TAIR|locus:2038588348 AT2G27420 [Arabidopsis thalian 0.942 0.942 0.481 7.1e-77
TAIR|locus:2090614452 AT3G19390 [Arabidopsis thalian 0.959 0.738 0.465 1.1e-76
TAIR|locus:2029924355 AT1G29090 [Arabidopsis thalian 0.931 0.912 0.478 2.7e-75
TAIR|locus:2157712361 CEP1 "cysteine endopeptidase 1 0.882 0.850 0.477 5.1e-74
TAIR|locus:2029934346 AT1G29080 [Arabidopsis thalian 0.928 0.933 0.455 2.9e-71
TAIR|locus:505006391364 CEP3 "cysteine endopeptidase 3 0.956 0.914 0.445 2.9e-71
TAIR|locus:2122113355 XCP1 "xylem cysteine peptidase 0.847 0.830 0.480 1.8e-69
TAIR|locus:2082881 AT3G49340 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 789 (282.8 bits), Expect = 1.8e-78, P = 1.8e-78
 Identities = 167/344 (48%), Positives = 221/344 (64%)

Query:     4 YFLIVVLIISGSCASQATYRTFDEGSIAEKFEQWKAQYGRTYKESAENSKRFEIFKDNLV 63
             +FL+ +L+ S +    +    F E S  EK EQW +++ R Y + +E + RFEIF +NL 
Sbjct:     6 FFLLAILLSSRTSGVTSRGGLF-EASAVEKHEQWMSRFNRVYSDDSEKTSRFEIFTNNLK 64

Query:    64 AVERFNNAAIGNRSYTLRLNKFADLTPQEFIASQTGFKMSDHSSSLKANGT----PFLYK 119
              VE  N     N++YTL +N+F+DLT +EF A  TG  + +  + +    +     F Y+
Sbjct:    65 FVESINMNT--NKTYTLDVNEFSDLTDEEFKARYTGLVVPEGMTRISTTDSHETVSFRYE 122

Query:   120 S-SQVPPSVNWIEKGAVTPVKYQGQC-------AVAAVEGINAIKINRLVSLSEQQLVDC 171
             +  +   S++WI++GAVT VK+Q QC       AVAAVEG+  I    LVSLSEQQL+DC
Sbjct:   123 NVGETGESMDWIQEGAVTSVKHQQQCGCCWAFSAVAAVEGMTKIANGELVSLSEQQLLDC 182

Query:   172 ATNDNNNGCYGGFMDDAFKYIIQNKGITNDAVYSYEGMSTGICDSIKAEDHAAQITNYED 231
             +T   NNGC GG M  AF YI +N+GIT +  Y Y+G     C+S      AA I+ YE 
Sbjct:   183 STE--NNGCGGGIMWKAFDYIKENQGITTEDNYPYQGAQQ-TCESNHLA--AATISGYET 237

Query:   232 VPPNDEESLLKAVANQPVSVAIDASALQF--YSGGVFNGYCETFLNHGVTAVGYGTSEEG 289
             VP NDEE+LLKAV+ QPVSVAI+ S  +F  YSGG+FNG C T L H VT VGYG SEEG
Sbjct:   238 VPQNDEEALLKAVSQQPVSVAIEGSGYEFIHYSGGIFNGECGTQLTHAVTIVGYGVSEEG 297

Query:   290 IKYWLIKNSWGQDWGEDGYFRLQRDIDQPQGQCGIAMFASFPVS 333
             IKYWL+KNSWG+ WGE+GY R+ RD+D PQG CG+A  A +PV+
Sbjct:   298 IKYWLLKNSWGESWGENGYMRIMRDVDSPQGMCGLASLAYYPVA 341
GO:0006508 "proteolysis" evidence=IEA;ISS
GO:0008234 "cysteine-type peptidase activity" evidence=IEA;ISS
TAIR|locus:2055440 AT2G34080 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2152445 SAG12 "senescence-associated gene 12" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2038588 AT2G27420 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2090614 AT3G19390 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2029924 AT1G29090 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2157712 CEP1 "cysteine endopeptidase 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2029934 AT1G29080 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:505006391 CEP3 "cysteine endopeptidase 3" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2122113 XCP1 "xylem cysteine peptidase 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
O65039CYSEP_RICCO3, ., 4, ., 2, 2, ., -0.50920.87930.85N/Ano
P06797CATL1_MOUSE3, ., 4, ., 2, 2, ., 1, 50.40120.85050.8862yesno
Q9GL24CATL1_CANFA3, ., 4, ., 2, 2, ., 1, 50.38460.89940.9399yesno
P25774CATS_HUMAN3, ., 4, ., 2, 2, ., 2, 70.39470.89080.9365yesno
Q9STL4CEP2_ARATH3, ., 4, ., 2, 2, ., -0.47740.95400.9196yesno
P25326CATS_BOVIN3, ., 4, ., 2, 2, ., 2, 70.39060.89360.9395yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.4.220.766

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
GSVIVG00018722001
SubName- Full=Chromosome chr12 scaffold_18, whole genome shotgun sequence; (341 aa)
(Vitis vinifera)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query348
pfam00112213 pfam00112, Peptidase_C1, Papain family cysteine pr 1e-97
cd02248210 cd02248, Peptidase_C1A, Peptidase C1A subfamily (M 2e-87
smart00645175 smart00645, Pept_C1, Papain family cysteine protea 5e-72
PTZ00021489 PTZ00021, PTZ00021, falcipain-2; Provisional 2e-53
PTZ00200448 PTZ00200, PTZ00200, cysteine proteinase; Provision 4e-52
PTZ00203348 PTZ00203, PTZ00203, cathepsin L protease; Provisio 8e-50
cd02620236 cd02620, Peptidase_C1A_CathepsinB, Cathepsin B gro 3e-27
cd02619223 cd02619, Peptidase_C1, C1 Peptidase family (MEROPS 5e-26
cd02621243 cd02621, Peptidase_C1A_CathepsinC, Cathepsin C; al 3e-25
cd02698239 cd02698, Peptidase_C1A_CathepsinX, Cathepsin X; th 2e-24
pfam0824658 pfam08246, Inhibitor_I29, Cathepsin propeptide inh 2e-19
smart0084857 smart00848, Inhibitor_I29, Cathepsin propeptide in 8e-19
PTZ00049693 PTZ00049, PTZ00049, cathepsin C-like protein; Prov 2e-08
COG4870372 COG4870, COG4870, Cysteine protease [Posttranslati 4e-07
PTZ00364548 PTZ00364, PTZ00364, dipeptidyl-peptidase I precurs 2e-06
PTZ00462 1004 PTZ00462, PTZ00462, Serine-repeat antigen protein; 6e-06
cd00585437 cd00585, Peptidase_C1B, Peptidase C1B subfamily (M 4e-04
>gnl|CDD|215726 pfam00112, Peptidase_C1, Papain family cysteine protease Back     alignment and domain information 
 Score =  287 bits (737), Expect = 1e-97
 Identities = 115/221 (52%), Positives = 140/221 (63%), Gaps = 19/221 (8%)

Query: 123 VPPSVNWIEKGAVTPVKYQGQC-------AVAAVEGINAIKINRLVSLSEQQLVDCATND 175
           +P S +W EKGAVTPVK QGQC       AV A+EG   IK  +LVSLSEQQLVDC T  
Sbjct: 1   LPESFDWREKGAVTPVKDQGQCGSCWAFSAVGALEGRYCIKTGKLVSLSEQQLVDCDTG- 59

Query: 176 NNNGCYGGFMDDAFKYIIQNKGITNDAVYSYEGMSTGICDSIKAEDHAAQITNYEDVPPN 235
            NNGC GG  D+AF+YI +N GI  ++ Y Y     G C   K+    A+I  Y DVP N
Sbjct: 60  -NNGCNGGLPDNAFEYIKKNGGIVTESDYPYTAH-DGTCKFKKSNSKYAKIKGYGDVPYN 117

Query: 236 DEESLLKAVA-NQPVSVAIDASA--LQFYSGGVFNGY-CETFLNHGVTAVGYGTSEEGIK 291
           DEE+L  A+A N PVSVAIDA     Q Y  GV+    C   L+H V  VGYGT E G+ 
Sbjct: 118 DEEALQAALAKNGPVSVAIDAYEDDFQLYKSGVYKHTECSGELDHAVLIVGYGT-ENGVP 176

Query: 292 YWLIKNSWGQDWGEDGYFRLQRDIDQPQGQCGIAMFASFPV 332
           YW++KNSWG DWGE+GYFR+ R ++    +CGIA  AS+P+
Sbjct: 177 YWIVKNSWGTDWGENGYFRIARGVN----ECGIASEASYPI 213

Length = 213
>gnl|CDD|239068 cd02248, Peptidase_C1A, Peptidase C1A subfamily (MEROPS database nomenclature); composed of cysteine peptidases (CPs) similar to papain, including the mammalian CPs (cathepsins B, C, F, H, L, K, O, S, V, X and W) Back     alignment and domain information
>gnl|CDD|214761 smart00645, Pept_C1, Papain family cysteine protease Back     alignment and domain information
>gnl|CDD|240232 PTZ00021, PTZ00021, falcipain-2; Provisional Back     alignment and domain information
>gnl|CDD|240310 PTZ00200, PTZ00200, cysteine proteinase; Provisional Back     alignment and domain information
>gnl|CDD|185513 PTZ00203, PTZ00203, cathepsin L protease; Provisional Back     alignment and domain information
>gnl|CDD|239111 cd02620, Peptidase_C1A_CathepsinB, Cathepsin B group; composed of cathepsin B and similar proteins, including tubulointerstitial nephritis antigen (TIN-Ag) Back     alignment and domain information
>gnl|CDD|239110 cd02619, Peptidase_C1, C1 Peptidase family (MEROPS database nomenclature), also referred to as the papain family; composed of two subfamilies of cysteine peptidases (CPs), C1A (papain) and C1B (bleomycin hydrolase) Back     alignment and domain information
>gnl|CDD|239112 cd02621, Peptidase_C1A_CathepsinC, Cathepsin C; also known as Dipeptidyl Peptidase I (DPPI), an atypical papain-like cysteine peptidase with chloride dependency and dipeptidyl aminopeptidase activity, resulting from its tetrameric structure which limits substrate access Back     alignment and domain information
>gnl|CDD|239149 cd02698, Peptidase_C1A_CathepsinX, Cathepsin X; the only papain-like lysosomal cysteine peptidase exhibiting carboxymonopeptidase activity Back     alignment and domain information
>gnl|CDD|219764 pfam08246, Inhibitor_I29, Cathepsin propeptide inhibitor domain (I29) Back     alignment and domain information
>gnl|CDD|214853 smart00848, Inhibitor_I29, Cathepsin propeptide inhibitor domain (I29) Back     alignment and domain information
>gnl|CDD|240244 PTZ00049, PTZ00049, cathepsin C-like protein; Provisional Back     alignment and domain information
>gnl|CDD|227207 COG4870, COG4870, Cysteine protease [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>gnl|CDD|240381 PTZ00364, PTZ00364, dipeptidyl-peptidase I precursor; Provisional Back     alignment and domain information
>gnl|CDD|185641 PTZ00462, PTZ00462, Serine-repeat antigen protein; Provisional Back     alignment and domain information
>gnl|CDD|238328 cd00585, Peptidase_C1B, Peptidase C1B subfamily (MEROPS database nomenclature); composed of eukaryotic bleomycin hydrolases (BH) and bacterial aminopeptidases C (pepC) Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 348
KOG1542372 consensus Cysteine proteinase Cathepsin F [Posttra 100.0
PTZ00203348 cathepsin L protease; Provisional 100.0
PTZ00021489 falcipain-2; Provisional 100.0
PTZ00200448 cysteine proteinase; Provisional 100.0
KOG1543325 consensus Cysteine proteinase Cathepsin L [Posttra 100.0
cd02621243 Peptidase_C1A_CathepsinC Cathepsin C; also known a 100.0
cd02698239 Peptidase_C1A_CathepsinX Cathepsin X; the only pap 100.0
cd02620236 Peptidase_C1A_CathepsinB Cathepsin B group; compos 100.0
cd02248210 Peptidase_C1A Peptidase C1A subfamily (MEROPS data 100.0
PTZ00049693 cathepsin C-like protein; Provisional 100.0
PTZ00364548 dipeptidyl-peptidase I precursor; Provisional 100.0
PF00112219 Peptidase_C1: Papain family cysteine protease This 100.0
smart00645174 Pept_C1 Papain family cysteine protease. 100.0
cd02619223 Peptidase_C1 C1 Peptidase family (MEROPS database 100.0
PTZ00462 1004 Serine-repeat antigen protein; Provisional 100.0
KOG1544470 consensus Predicted cysteine proteinase TIN-ag [Ge 100.0
COG4870372 Cysteine protease [Posttranslational modification, 99.91
cd00585437 Peptidase_C1B Peptidase C1B subfamily (MEROPS data 99.81
PF0824658 Inhibitor_I29: Cathepsin propeptide inhibitor doma 99.72
smart0084857 Inhibitor_I29 Cathepsin propeptide inhibitor domai 99.57
PF03051438 Peptidase_C1_2: Peptidase C1-like family This fami 99.37
COG3579444 PepC Aminopeptidase C [Amino acid transport and me 97.3
PF0812741 Propeptide_C1: Peptidase family C1 propeptide; Int 96.23
PF13529144 Peptidase_C39_2: Peptidase_C39 like family; PDB: 3 94.45
PF14399 317 Transpep_BrtH: NlpC/p60-like transpeptidase 87.21
PF05543175 Peptidase_C47: Staphopain peptidase C47; InterPro: 84.04
COG4990195 Uncharacterized protein conserved in bacteria [Fun 81.58
KOG4128457 consensus Bleomycin hydrolases and aminopeptidases 80.34
>KOG1542 consensus Cysteine proteinase Cathepsin F [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information 
Probab=100.00  E-value=2.3e-78  Score=554.69  Aligned_cols=292  Identities=39%  Similarity=0.719  Sum_probs=256.5

Q ss_pred             hhHHHHHHHHHHHhCCccCChHHHHHHHHHHHHHHHHHHHhcccccCCCcEEEEcccCCCCCHHHHHHhhcCcCCCCCcc
Q 043883           28 GSIAEKFEQWKAQYGRTYKESAENSKRFEIFKDNLVAVERFNNAAIGNRSYTLRLNKFADLTPQEFIASQTGFKMSDHSS  107 (348)
Q Consensus        28 ~~~~~~f~~f~~~~~k~Y~s~~E~~~R~~iF~~n~~~I~~~N~~~~~~~s~~~g~N~FsD~t~eEf~~~~~~~~~~~~~~  107 (348)
                      ....++|..|+.+|+|+|.+.+|..+|+.||.+|+..+++++.+  ...|.+.|+|+|||||+|||++++++.+......
T Consensus        65 l~~~~~F~~F~~kf~r~Y~s~eE~~~Rl~iF~~N~~~a~~~q~~--d~gsA~yGvtqFSDlT~eEFkk~~l~~~~~~~~~  142 (372)
T KOG1542|consen   65 LGLEDSFKLFTIKFGRSYASREEHAHRLSIFKHNLLRAERLQEN--DPGSAEYGVTQFSDLTEEEFKKIYLGVKRRGSKL  142 (372)
T ss_pred             cchHHHHHHHHHhcCcccCcHHHHHHHHHHHHHHHHHHHHhhhc--CccccccCccchhhcCHHHHHHHhhccccccccC
Confidence            34578899999999999999999999999999999999999987  4458999999999999999999998766531111


Q ss_pred             cccCCCCccccCC-CCCCCceecccCCCCCcccccccc-------HHHHHHHHHHHHcCCCcCCCHHHHHhhcCCCCCCC
Q 043883          108 SLKANGTPFLYKS-SQVPPSVNWIEKGAVTPVKYQGQC-------AVAAVEGINAIKINRLVSLSEQQLVDCATNDNNNG  179 (348)
Q Consensus       108 ~~~~~~~~~~~~~-~~lP~~~Dwr~~g~v~pv~dQg~C-------a~~~~e~~~~i~~~~~~~lS~q~l~dC~~~~~~~g  179 (348)
                      .  .........+ ..||++||||++|.||||||||+|       +++++|++++|++|++++||||||+||+.  .++|
T Consensus       143 ~--~~~~~~~~~~~~~lP~~fDWR~kgaVTpVKnQG~CGSCWAFS~tG~vEga~~i~~g~LvsLSEQeLvDCD~--~d~g  218 (372)
T KOG1542|consen  143 P--GDAAEAPIEPGESLPESFDWRDKGAVTPVKNQGMCGSCWAFSTTGAVEGAWAIATGKLVSLSEQELVDCDS--CDNG  218 (372)
T ss_pred             c--cccccCcCCCCCCCCcccchhccCCccccccCCcCcchhhhhhhhhhhhHHHhhcCcccccchhhhhcccC--cCCc
Confidence            1  1111111233 789999999999999999999987       78999999999999999999999999997  4999


Q ss_pred             CCCCchhHHHHHHHHcCCCCCCCcccccCCcCC-CCCCcccCCccEEEeeeEecCCCCHHHHHHHHH-cCCeEEEEecCc
Q 043883          180 CYGGFMDDAFKYIIQNKGITNDAVYSYEGMSTG-ICDSIKAEDHAAQITNYEDVPPNDEESLLKAVA-NQPVSVAIDASA  257 (348)
Q Consensus       180 C~GG~~~~a~~~~~~~~Gi~~e~~yPY~~~~~~-~C~~~~~~~~~~~i~~~~~v~~~~~~~lk~~l~-~GPV~v~i~~~~  257 (348)
                      |+||.+..||+|+++.+|+..|.+|||++. .+ .|..++ ....+.|.+|..++ .||++|.++|. +|||+|+|++..
T Consensus       219 C~GGl~~nA~~~~~~~gGL~~E~dYPY~g~-~~~~C~~~~-~~~~v~I~~f~~l~-~nE~~ia~wLv~~GPi~vgiNa~~  295 (372)
T KOG1542|consen  219 CNGGLMDNAFKYIKKAGGLEKEKDYPYTGK-KGNQCHFDK-SKIVVSIKDFSMLS-NNEDQIAAWLVTFGPLSVGINAKP  295 (372)
T ss_pred             CCCCChhHHHHHHHHhCCccccccCCcccc-CCCccccch-hhceEEEeccEecC-CCHHHHHHHHHhcCCeEEEEchHH
Confidence            999999999999888889999999999999 55 999874 66789999999998 59999999998 899999999779


Q ss_pred             cccccCceEcC---CCCCC-CCeEEEEEEeeecCCCceEEEEEcCCCCCCCCCcEEEEEecCCCCCCccccccccceee
Q 043883          258 LQFYSGGVFNG---YCETF-LNHGVTAVGYGTSEEGIKYWLIKNSWGQDWGEDGYFRLQRDIDQPQGQCGIAMFASFPV  332 (348)
Q Consensus       258 f~~Y~~Giy~~---~c~~~-~~Hav~iVGyg~~~~g~~yWiikNSWG~~WGe~GY~~i~~~~~~~~~~Cgi~~~~~~p~  332 (348)
                      +++|++||..+   .|+.. ++|||+|||||.+.-.++|||||||||++|||+||+||.||.    |.|||+++++-+.
T Consensus       296 mQ~YrgGV~~P~~~~Cs~~~~~HaVLlvGyG~~g~~~PYWIVKNSWG~~WGE~GY~~l~RG~----N~CGi~~mvss~~  370 (372)
T KOG1542|consen  296 MQFYRGGVSCPSKYICSPKLLNHAVLLVGYGSSGYEKPYWIVKNSWGTSWGEKGYYKLCRGS----NACGIADMVSSAA  370 (372)
T ss_pred             HHHhcccccCCCcccCCccccCceEEEEeecCCCCCCceEEEECCccccccccceEEEeccc----cccccccchhhhh
Confidence            99999999988   48865 899999999998633899999999999999999999999996    6799999987654

>PTZ00203 cathepsin L protease; Provisional Back     alignment and domain information
>PTZ00021 falcipain-2; Provisional Back     alignment and domain information
>PTZ00200 cysteine proteinase; Provisional Back     alignment and domain information
>KOG1543 consensus Cysteine proteinase Cathepsin L [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>cd02621 Peptidase_C1A_CathepsinC Cathepsin C; also known as Dipeptidyl Peptidase I (DPPI), an atypical papain-like cysteine peptidase with chloride dependency and dipeptidyl aminopeptidase activity, resulting from its tetrameric structure which limits substrate access Back     alignment and domain information
>cd02698 Peptidase_C1A_CathepsinX Cathepsin X; the only papain-like lysosomal cysteine peptidase exhibiting carboxymonopeptidase activity Back     alignment and domain information
>cd02620 Peptidase_C1A_CathepsinB Cathepsin B group; composed of cathepsin B and similar proteins, including tubulointerstitial nephritis antigen (TIN-Ag) Back     alignment and domain information
>cd02248 Peptidase_C1A Peptidase C1A subfamily (MEROPS database nomenclature); composed of cysteine peptidases (CPs) similar to papain, including the mammalian CPs (cathepsins B, C, F, H, L, K, O, S, V, X and W) Back     alignment and domain information
>PTZ00049 cathepsin C-like protein; Provisional Back     alignment and domain information
>PTZ00364 dipeptidyl-peptidase I precursor; Provisional Back     alignment and domain information
>PF00112 Peptidase_C1: Papain family cysteine protease This is family C1 in the peptidase classification Back     alignment and domain information
>smart00645 Pept_C1 Papain family cysteine protease Back     alignment and domain information
>cd02619 Peptidase_C1 C1 Peptidase family (MEROPS database nomenclature), also referred to as the papain family; composed of two subfamilies of cysteine peptidases (CPs), C1A (papain) and C1B (bleomycin hydrolase) Back     alignment and domain information
>PTZ00462 Serine-repeat antigen protein; Provisional Back     alignment and domain information
>KOG1544 consensus Predicted cysteine proteinase TIN-ag [General function prediction only] Back     alignment and domain information
>COG4870 Cysteine protease [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>cd00585 Peptidase_C1B Peptidase C1B subfamily (MEROPS database nomenclature); composed of eukaryotic bleomycin hydrolases (BH) and bacterial aminopeptidases C (pepC) Back     alignment and domain information
>PF08246 Inhibitor_I29: Cathepsin propeptide inhibitor domain (I29); InterPro: IPR013201 Peptide proteinase inhibitors can be found as single domain proteins or as single or multiple domains within proteins; these are referred to as either simple or compound inhibitors, respectively Back     alignment and domain information
>smart00848 Inhibitor_I29 Cathepsin propeptide inhibitor domain (I29) Back     alignment and domain information
>PF03051 Peptidase_C1_2: Peptidase C1-like family This family is a subfamily of the Prosite entry; InterPro: IPR004134 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families Back     alignment and domain information
>COG3579 PepC Aminopeptidase C [Amino acid transport and metabolism] Back     alignment and domain information
>PF08127 Propeptide_C1: Peptidase family C1 propeptide; InterPro: IPR012599 This domain is found at the N-terminal of cathepsin B and cathepsin B-like peptidases that belong to MEROPS peptidase subfamily C1A Back     alignment and domain information
>PF13529 Peptidase_C39_2: Peptidase_C39 like family; PDB: 3ERV_A Back     alignment and domain information
>PF14399 Transpep_BrtH: NlpC/p60-like transpeptidase Back     alignment and domain information
>PF05543 Peptidase_C47: Staphopain peptidase C47; InterPro: IPR008750 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families Back     alignment and domain information
>COG4990 Uncharacterized protein conserved in bacteria [Function unknown] Back     alignment and domain information
>KOG4128 consensus Bleomycin hydrolases and aminopeptidases of cysteine protease family [Amino acid transport and metabolism] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query348
1s4v_A229 The 2.0 A Crystal Structure Of The Kdel-Tailed Cyst 1e-67
2fo5_A262 Crystal Structure Of Recombinant Barley Cysteine En 2e-61
1cqd_A221 The 2.1 Angstrom Structure Of A Cysteine Protease W 3e-57
2c0y_A315 The Crystal Structure Of A Cys25ala Mutant Of Human 9e-54
3p5u_A220 Actinidin From Actinidia Arguta Planch (Sarusashi) 2e-52
3p5w_A220 Actinidin From Actinidia Arguta Planch (Sarusashi) 2e-52
7pck_A314 Crystal Structure Of Wild Type Human Procathepsin K 4e-50
1cs8_A316 Crystal Structure Of Procathepsin L Length = 316 1e-49
1cjl_A312 Crystal Structure Of A Cysteine Protease Proform Le 2e-49
3qt4_A329 Structure Of Digestive Procathepsin L 3 Of Tenebrio 2e-49
3tnx_A363 Structure Of The Precursor Of A Thermostable Varian 1e-48
3qj3_A331 Structure Of Digestive Procathepsin L2 Proteinase F 3e-48
1aec_A218 Crystal Structure Of Actinidin-E-64 Complex+ Length 1e-47
1iwd_A215 Proposed Amino Acid Sequence And The 1.63 Angstrom 8e-47
2act_A220 Crystallographic Refinement Of The Structure Of Act 1e-46
1pci_A322 Procaricain Length = 322 3e-46
2bdz_A214 Mexicain From Jacaratia Mexicana Length = 214 9e-46
1yal_A218 Carica Papaya Chymopapain At 1.7 Angstroms Resoluti 3e-45
3bcn_A209 Crystal Structure Of A Papain-Like Cysteine Proteas 5e-45
2pns_A208 1.9 Angstrom Resolution Crystal Structure Of A Plan 9e-45
3f75_A224 Activated Toxoplasma Gondii Cathepsin L (Tgcpl) In 4e-44
1ms6_A222 Dipeptide Nitrile Inhibitor Bound To Cathepsin S. L 1e-43
3kwn_A219 Cathepsin S In Complex With Thioether Acetamide P3 1e-43
3mpe_A220 Crystal Structure Of Human Cathepsin-S C25s Mutant 1e-43
3iej_A222 Pyrazole-Based Cathepsin S Inhibitors With Arylalky 1e-43
1glo_A217 Crystal Structure Of Cys25ser Mutant Of Human Cathe 1e-43
2f1g_A220 Cathepsin S In Complex With Non-Covalent 2-(Benzoxa 1e-43
3n3g_A217 4-(3-Trifluoromethylphenyl)-Pyrimidine-2-Carbonitri 1e-43
3ovx_A218 Cathepsin S In Complex With A Covalent Inhibitor Wi 1e-43
2fq9_A225 Cathepsin S With Nitrile Inhibitor Length = 225 1e-43
3u8e_A222 Crystal Structure Of Cysteine Protease From Bulbs O 2e-43
1npz_A217 Crystal Structures Of Cathepsin S Inhibitor Complex 3e-43
2g6d_A217 Human Cathepsin S Mutant With Vinyl Sulfone Inhibit 4e-43
2fye_A217 Mutant Human Cathepsin S With Irreversible Inhibito 5e-43
1o0e_A208 1.9 Angstrom Crystal Structure Of A Plant Cysteine 6e-43
3hwn_A258 Cathepsin L With Az13010160 Length = 258 1e-42
2b1m_A246 Crystal Structure Of A Papain-Fold Protein Without 2e-42
3h6s_A221 Strucure Of Clitocypin - Cathepsin V Complex Length 4e-42
1fh0_A221 Crystal Structure Of Human Cathepsin V Complexed Wi 6e-42
3h7d_A215 The Crystal Structure Of The Cathepsin K Variant M5 3e-41
2o6x_A310 Crystal Structure Of Procathepsin L1 From Fasciola 1e-40
1u9v_A217 Crystal Structure Of The Cysteine Protease Human Ca 2e-40
1mem_A215 Crystal Structure Of Cathepsin K Complexed With A P 3e-40
1snk_A214 Cathepsin K Complexed With Carbamate Derivatized No 3e-40
2f7d_A215 A Mutant Rabbit Cathepsin K With A Nitrile Inhibito 7e-40
2nqd_B221 Crystal Structure Of Cysteine Protease Inhibitor, C 1e-39
3of8_A221 Structural Basis For Reversible And Irreversible In 1e-39
3ovz_A213 Cathepsin K In Complex With A Covalent Inhibitor Wi 2e-39
3bc3_A220 Exploring Inhibitor Binding At The S Subsites Of Ca 2e-39
3iv2_A220 Crystal Structure Of Mature Apo-Cathepsin L C25a Mu 2e-39
3h89_A220 A Combined Crystallographic And Molecular Dynamics 3e-39
1ppo_A216 Determination Of The Structure Of Papaya Protease O 5e-39
1meg_A216 Crystal Structure Of A Caricain D158e Mutant In Com 6e-39
2vhs_A217 Cathsilicatein, A Chimera Length = 217 8e-39
3kse_A220 Unreduced Cathepsin L In Complex With Stefin A Leng 9e-39
3hha_A220 Crystal Structure Of Cathepsin L In Complex With Az 9e-39
1vsn_A215 Crystal Structure Of A Potent Small Molecule Inhibi 1e-37
3ima_A212 Complex Strcuture Of Tarocystatin And Papain Length 3e-37
2cio_A212 The High Resolution X-Ray Structure Of Papain Compl 3e-37
3ioq_A213 Crystal Structure Of The Carica Candamarcensis Cyst 3e-37
1khp_A212 Monoclinic Form Of Papain/zlfg-dam Covalent Complex 3e-37
8pch_A220 Crystal Structure Of Porcine Cathepsin H Determined 7e-37
1stf_E212 The Refined 2.4 Angstroms X-Ray Crystal Structure O 1e-36
1pip_A212 Crystal Structure Of Papain-Succinyl-Gln-Val-Val-Al 1e-36
1gec_E216 Glycyl Endopeptidase-complex With Benzyloxycarbonyl 3e-36
1ppp_A212 Crystal Structure Of Papain-E64-C Complex. Binding 3e-36
2p7u_A215 The Crystal Structure Of Rhodesain, The Major Cyste 6e-33
1aim_A215 Cruzain Inhibited By Benzoyl-Tyrosine-Alanine-Fluor 3e-30
3pnr_A240 Structure Of Pbicp-C In Complex With Falcipain-2 Le 3e-30
1yvb_A241 The Plasmodium Falciparum Cysteine Protease Falcipa 3e-30
1ewp_A215 Cruzain Bound To Mor-Leu-Hpq Length = 215 4e-30
3iut_A221 The Crystal Structure Of Cruzain In Complex With A 3e-29
3hd3_A215 High Resolution Crystal Structure Of Cruzain Bound 3e-29
3bpm_A243 Crystal Structure Of Falcipain-3 With Its Inhibitor 2e-28
1mhw_A175 Design Of Non-covalent Inhibitors Of Human Cathepsi 9e-27
1icf_A175 Crystal Structure Of Mhc Class Ii Associated P41 Ii 1e-26
1m6d_A214 Crystal Structure Of Human Cathepsin F Length = 214 5e-22
1xkg_A312 Crystal Structure Of The Major House Dust Mite Alle 3e-21
3d6s_A223 Crystal Structure Of Mite Allergen Der F 1 Length = 7e-19
3rvw_A222 Crystal Structure Of Der P 1 Complexed With Fab 4c1 1e-18
3f5v_A222 C2 Crystal Form Of Mite Allergen Der P 1 Length = 2 4e-18
2as8_A222 Crystal Structure Of Mature And Fully Active Der P 4e-18
3pdf_A441 Discovery Of Novel Cyanamide-Based Inhibitors Of Ca 8e-15
1deu_A277 Crystal Structure Of Human Procathepsin X: A Cystei 1e-13
1ef7_A242 Crystal Structure Of Human Cathepsin X Length = 242 2e-13
1jqp_A438 Dipeptidyl Peptidase I (Cathepsin C), A Tetrameric 4e-13
1k3b_C69 Crystal Structure Of Human Dipeptidyl Peptidase I ( 9e-11
3cbj_A266 Chagasin-cathepsin B Complex Length = 266 1e-10
1pbh_A317 Crystal Structure Of Human Recombinant Procathepsin 3e-10
3ai8_B256 Cathepsin B In Complex With The Nitroxoline Length 4e-10
3k9m_A254 Cathepsin B In Complex With Stefin A Length = 254 5e-10
1gmy_A261 Cathepsin B Complexed With Dipeptidyl Nitrile Inhib 5e-10
1mir_A322 Rat Procathepsin B Length = 322 1e-09
3hhi_A325 Crystal Structure Of Cathepsin B From T. Brucei In 2e-09
1cpj_A260 Crystal Structures Of Recombinant Rat Cathepsin B A 2e-09
1cte_A254 Crystal Structures Of Recombinant Rat Cathepsin B A 3e-09
4hwy_A340 Trypanosoma Brucei Procathepsin B Solved From 40 Fs 6e-09
3mor_A317 Crystal Structure Of Cathepsin B From Trypanosoma B 6e-09
1ito_A256 Crystal Structure Analysis Of Bovine Spleen Catheps 2e-08
3qsd_A254 Structure Of Cathepsin B1 From Schistosoma Mansoni 3e-08
1qdq_A253 X-Ray Crystal Structure Of Bovine Cathepsin B-Ca074 3e-08
1sp4_B205 Crystal Structure Of Ns-134 In Complex With Bovine 3e-08
1huc_B205 The Refined 2.15 Angstroms X-Ray Crystal Structure 6e-08
3f75_P106 Activated Toxoplasma Gondii Cathepsin L (Tgcpl) In 1e-07
1icf_B42 Crystal Structure Of Mhc Class Ii Associated P41 Ii 9e-07
2wbf_X265 Crystal Structure Analysis Of Sera5e From Plasmodiu 4e-05
3ch2_X265 Crystal Structure Analysis Of Sera5e From Plasmodiu 4e-05
>pdb|1S4V|A Chain A, The 2.0 A Crystal Structure Of The Kdel-Tailed Cysteine Endopeptidase Functioning In Programmed Cell Death Of Ricinus Communis Endosperm Length = 229 Back     alignment and structure 
Iteration: 1

 Score =  253 bits (645), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 134/227 (59%), Positives = 155/227 (68%), Gaps = 11/227 (4%)
Query: 123 VPPSVNWIEKGAVTPVKYQGQCA-------VAAVEGINAIKINRLVSLSEQQLVDCATND 175
           VP SV+W +KGAVT VK QGQC        + AVEGIN IK N+LVSLSEQ+LVDC T D
Sbjct: 2   VPASVDWRKKGAVTSVKDQGQCGSCWAFSTIVAVEGINQIKTNKLVSLSEQELVDCDT-D 60
Query: 176 NNNGCYGGFMDDAFKYIIQNKGITNDAVYSYEGMSTGICDSIKAEDHAAQITNYEDVPPN 235
            N GC GG MD AF++I Q  GIT +A Y YE    G CD  K    A  I  +E+VP N
Sbjct: 61  QNQGCNGGLMDYAFEFIKQRGGITTEANYPYEAYD-GTCDVSKENAPAVSIDGHENVPEN 119
Query: 236 DEESLLKAVANQPVSVAIDA--SALQFYSGGVFNGYCETFLNHGVTAVGYGTSEEGIKYW 293
           DE +LLKAVANQPVSVAIDA  S  QFYS GVF G C T L+HGV  VGYGT+ +G KYW
Sbjct: 120 DENALLKAVANQPVSVAIDAGGSDFQFYSEGVFTGSCGTELDHGVAIVGYGTTIDGTKYW 179
Query: 294 LIKNSWGQDWGEDGYFRLQRDIDQPQGQCGIAMFASFPVSKESAQPS 340
            +KNSWG +WGE GY R++R I   +G CGIAM AS+P+ K S  PS
Sbjct: 180 TVKNSWGPEWGEKGYIRMERGISDKEGLCGIAMEASYPIKKSSNNPS 226
>pdb|2FO5|A Chain A, Crystal Structure Of Recombinant Barley Cysteine Endoprotease B Isoform 2 (Ep-B2) In Complex With Leupeptin Length = 262 Back     alignment and structure
>pdb|1CQD|A Chain A, The 2.1 Angstrom Structure Of A Cysteine Protease With Proline Specificity From Ginger Rhizome, Zingiber Officinale Length = 221 Back     alignment and structure
>pdb|2C0Y|A Chain A, The Crystal Structure Of A Cys25ala Mutant Of Human Procathepsin S Length = 315 Back     alignment and structure
>pdb|3P5U|A Chain A, Actinidin From Actinidia Arguta Planch (Sarusashi) Length = 220 Back     alignment and structure
>pdb|3P5W|A Chain A, Actinidin From Actinidia Arguta Planch (Sarusashi) Length = 220 Back     alignment and structure
>pdb|7PCK|A Chain A, Crystal Structure Of Wild Type Human Procathepsin K Length = 314 Back     alignment and structure
>pdb|1CS8|A Chain A, Crystal Structure Of Procathepsin L Length = 316 Back     alignment and structure
>pdb|1CJL|A Chain A, Crystal Structure Of A Cysteine Protease Proform Length = 312 Back     alignment and structure
>pdb|3QT4|A Chain A, Structure Of Digestive Procathepsin L 3 Of Tenebrio Molitor Larval Midgut Length = 329 Back     alignment and structure
>pdb|3TNX|A Chain A, Structure Of The Precursor Of A Thermostable Variant Of Papain At 2.6 Angstroem Resolution Length = 363 Back     alignment and structure
>pdb|3QJ3|A Chain A, Structure Of Digestive Procathepsin L2 Proteinase From Tenebrio Molitor Larval Midgut Length = 331 Back     alignment and structure
>pdb|1AEC|A Chain A, Crystal Structure Of Actinidin-E-64 Complex+ Length = 218 Back     alignment and structure
>pdb|1IWD|A Chain A, Proposed Amino Acid Sequence And The 1.63 Angstrom X-ray Crystal Structure Of A Plant Cysteine Protease Ervatamin B: Insight Into The Structural Basis Of Its Stability And Substrate Specificity Length = 215 Back     alignment and structure
>pdb|2ACT|A Chain A, Crystallographic Refinement Of The Structure Of Actinidin At 1.7 Angstroms Resolution By Fast Fourier Least-Squares Methods Length = 220 Back     alignment and structure
>pdb|1PCI|A Chain A, Procaricain Length = 322 Back     alignment and structure
>pdb|2BDZ|A Chain A, Mexicain From Jacaratia Mexicana Length = 214 Back     alignment and structure
>pdb|1YAL|A Chain A, Carica Papaya Chymopapain At 1.7 Angstroms Resolution Length = 218 Back     alignment and structure
>pdb|3BCN|A Chain A, Crystal Structure Of A Papain-Like Cysteine Protease Ervatamin-A Complexed With Irreversible Inhibitor E-64 Length = 209 Back     alignment and structure
>pdb|2PNS|A Chain A, 1.9 Angstrom Resolution Crystal Structure Of A Plant Cysteine Protease Ervatamin-C Refinement With Cdna Derived Amino Acid Sequence Length = 208 Back     alignment and structure
>pdb|3F75|A Chain A, Activated Toxoplasma Gondii Cathepsin L (Tgcpl) In Complex With Its Propeptide Length = 224 Back     alignment and structure
>pdb|1MS6|A Chain A, Dipeptide Nitrile Inhibitor Bound To Cathepsin S. Length = 222 Back     alignment and structure
>pdb|3KWN|A Chain A, Cathepsin S In Complex With Thioether Acetamide P3 Inhibitor Length = 219 Back     alignment and structure
>pdb|3MPE|A Chain A, Crystal Structure Of Human Cathepsin-S C25s Mutant With Bound Drug Length = 220 Back     alignment and structure
>pdb|3IEJ|A Chain A, Pyrazole-Based Cathepsin S Inhibitors With Arylalkynes As P1 Binding Elements Length = 222 Back     alignment and structure
>pdb|1GLO|A Chain A, Crystal Structure Of Cys25ser Mutant Of Human Cathepsin S Length = 217 Back     alignment and structure
>pdb|2F1G|A Chain A, Cathepsin S In Complex With Non-Covalent 2-(Benzoxazol-2-Ylamino)- Acetamide Length = 220 Back     alignment and structure
>pdb|3N3G|A Chain A, 4-(3-Trifluoromethylphenyl)-Pyrimidine-2-Carbonitrile As Cathepsin S Inhibitors: N3, Not N1 Is Critically Important Length = 217 Back     alignment and structure
>pdb|3OVX|A Chain A, Cathepsin S In Complex With A Covalent Inhibitor With An Aldehyde Warhead Length = 218 Back     alignment and structure
>pdb|2FQ9|A Chain A, Cathepsin S With Nitrile Inhibitor Length = 225 Back     alignment and structure
>pdb|3U8E|A Chain A, Crystal Structure Of Cysteine Protease From Bulbs Of Crocus Sativus At 1.3 A Resolution Length = 222 Back     alignment and structure
>pdb|1NPZ|A Chain A, Crystal Structures Of Cathepsin S Inhibitor Complexes Length = 217 Back     alignment and structure
>pdb|2G6D|A Chain A, Human Cathepsin S Mutant With Vinyl Sulfone Inhibitor Cra- 14009 Length = 217 Back     alignment and structure
>pdb|2FYE|A Chain A, Mutant Human Cathepsin S With Irreversible Inhibitor Cra- 14013 Length = 217 Back     alignment and structure
>pdb|1O0E|A Chain A, 1.9 Angstrom Crystal Structure Of A Plant Cysteine Protease Ervatamin C Length = 208 Back     alignment and structure
>pdb|3HWN|A Chain A, Cathepsin L With Az13010160 Length = 258 Back     alignment and structure
>pdb|2B1M|A Chain A, Crystal Structure Of A Papain-Fold Protein Without The Catalytic Cysteine From Seeds Of Pachyrhizus Erosus Length = 246 Back     alignment and structure
>pdb|3H6S|A Chain A, Strucure Of Clitocypin - Cathepsin V Complex Length = 221 Back     alignment and structure
>pdb|1FH0|A Chain A, Crystal Structure Of Human Cathepsin V Complexed With An Irreversible Vinyl Sulfone Inhibitor Length = 221 Back     alignment and structure
>pdb|3H7D|A Chain A, The Crystal Structure Of The Cathepsin K Variant M5 In Compl Chondroitin-4-Sulfate Length = 215 Back     alignment and structure
>pdb|2O6X|A Chain A, Crystal Structure Of Procathepsin L1 From Fasciola Hepatica Length = 310 Back     alignment and structure
>pdb|1U9V|A Chain A, Crystal Structure Of The Cysteine Protease Human Cathepsin K In Complex With The Covalent Inhibitor Nvp-Abe854 Length = 217 Back     alignment and structure
>pdb|1MEM|A Chain A, Crystal Structure Of Cathepsin K Complexed With A Potent Vinyl Sulfone Inhibitor Length = 215 Back     alignment and structure
>pdb|1SNK|A Chain A, Cathepsin K Complexed With Carbamate Derivatized Norleucine Aldehyde Length = 214 Back     alignment and structure
>pdb|2F7D|A Chain A, A Mutant Rabbit Cathepsin K With A Nitrile Inhibitor Length = 215 Back     alignment and structure
>pdb|2NQD|B Chain B, Crystal Structure Of Cysteine Protease Inhibitor, Chagasin, In Complex With Human Cathepsin L Length = 221 Back     alignment and structure
>pdb|3OF8|A Chain A, Structural Basis For Reversible And Irreversible Inhibition Of Human Cathepsin L By Their Respective Dipeptidyl Glyoxal And Diazomethylketone Inhibitors Length = 221 Back     alignment and structure
>pdb|3OVZ|A Chain A, Cathepsin K In Complex With A Covalent Inhibitor With A Ketoamide Warhead Length = 213 Back     alignment and structure
>pdb|3BC3|A Chain A, Exploring Inhibitor Binding At The S Subsites Of Cathepsin L Length = 220 Back     alignment and structure
>pdb|3IV2|A Chain A, Crystal Structure Of Mature Apo-Cathepsin L C25a Mutant Length = 220 Back     alignment and structure
>pdb|3H89|A Chain A, A Combined Crystallographic And Molecular Dynamics Study Of Cathepsin-L Retro-Binding Inhibitors(Compound 4) Length = 220 Back     alignment and structure
>pdb|1PPO|A Chain A, Determination Of The Structure Of Papaya Protease Omega Length = 216 Back     alignment and structure
>pdb|1MEG|A Chain A, Crystal Structure Of A Caricain D158e Mutant In Complex With E-64 Length = 216 Back     alignment and structure
>pdb|2VHS|A Chain A, Cathsilicatein, A Chimera Length = 217 Back     alignment and structure
>pdb|3KSE|A Chain A, Unreduced Cathepsin L In Complex With Stefin A Length = 220 Back     alignment and structure
>pdb|3HHA|A Chain A, Crystal Structure Of Cathepsin L In Complex With Az12878478 Length = 220 Back     alignment and structure
>pdb|1VSN|A Chain A, Crystal Structure Of A Potent Small Molecule Inhibitor Bound To Cathepsin K Length = 215 Back     alignment and structure
>pdb|3IMA|A Chain A, Complex Strcuture Of Tarocystatin And Papain Length = 212 Back     alignment and structure
>pdb|2CIO|A Chain A, The High Resolution X-Ray Structure Of Papain Complexed With Fragments Of The Trypanosoma Brucei Cysteine Protease Inhibitor Icp Length = 212 Back     alignment and structure
>pdb|3IOQ|A Chain A, Crystal Structure Of The Carica Candamarcensis Cysteine Protease Cms1ms2 In Complex With E-64 Length = 213 Back     alignment and structure
>pdb|1KHP|A Chain A, Monoclinic Form Of Papain/zlfg-dam Covalent Complex Length = 212 Back     alignment and structure
>pdb|8PCH|A Chain A, Crystal Structure Of Porcine Cathepsin H Determined At 2.1 Angstrom Resolution: Location Of The Mini-Chain C-Terminal Carboxyl Group Defines Cathepsin H Aminopeptidase Function Length = 220 Back     alignment and structure
>pdb|1STF|E Chain E, The Refined 2.4 Angstroms X-Ray Crystal Structure Of Recombinant Human Stefin B In Complex With The Cysteine Proteinase Papain: A Novel Type Of Proteinase Inhibitor Interaction Length = 212 Back     alignment and structure
>pdb|1PIP|A Chain A, Crystal Structure Of Papain-Succinyl-Gln-Val-Val-Ala-Ala-P- Nitroanilide Complex At 1.7 Angstroms Resolution: Noncovalent Binding Mode Of A Common Sequence Of Endogenous Thiol Protease Inhibitors Length = 212 Back     alignment and structure
>pdb|1GEC|E Chain E, Glycyl Endopeptidase-complex With Benzyloxycarbonyl-leucine-valine- Glycine-methylene Covalently Bound To Cysteine 25 Length = 216 Back     alignment and structure
>pdb|1PPP|A Chain A, Crystal Structure Of Papain-E64-C Complex. Binding Diversity Of E64-C To Papain S2 And S3 Subsites Length = 212 Back     alignment and structure
>pdb|2P7U|A Chain A, The Crystal Structure Of Rhodesain, The Major Cysteine Protease Of T. Brucei Rhodesiense, Bound To Inhibitor K777 Length = 215 Back     alignment and structure
>pdb|1AIM|A Chain A, Cruzain Inhibited By Benzoyl-Tyrosine-Alanine-Fluoromethylketone Length = 215 Back     alignment and structure
>pdb|3PNR|A Chain A, Structure Of Pbicp-C In Complex With Falcipain-2 Length = 240 Back     alignment and structure
>pdb|1YVB|A Chain A, The Plasmodium Falciparum Cysteine Protease Falcipain-2 Length = 241 Back     alignment and structure
>pdb|1EWP|A Chain A, Cruzain Bound To Mor-Leu-Hpq Length = 215 Back     alignment and structure
>pdb|3IUT|A Chain A, The Crystal Structure Of Cruzain In Complex With A Tetrafluorophenoxymethyl Ketone Inhibitor Length = 221 Back     alignment and structure
>pdb|3HD3|A Chain A, High Resolution Crystal Structure Of Cruzain Bound To The Vinyl Sulfone Inhibitor Smdc-256047 Length = 215 Back     alignment and structure
>pdb|3BPM|A Chain A, Crystal Structure Of Falcipain-3 With Its Inhibitor, Leupeptin Length = 243 Back     alignment and structure
>pdb|1MHW|A Chain A, Design Of Non-covalent Inhibitors Of Human Cathepsin L. From The 96- Residue Proregion To Optimized Tripeptides Length = 175 Back     alignment and structure
>pdb|1ICF|A Chain A, Crystal Structure Of Mhc Class Ii Associated P41 Ii Fragment In Complex With Cathepsin L Length = 175 Back     alignment and structure
>pdb|1M6D|A Chain A, Crystal Structure Of Human Cathepsin F Length = 214 Back     alignment and structure
>pdb|1XKG|A Chain A, Crystal Structure Of The Major House Dust Mite Allergen Der P 1 In Its Pro Form At 1.61 A Resolution Length = 312 Back     alignment and structure
>pdb|3D6S|A Chain A, Crystal Structure Of Mite Allergen Der F 1 Length = 223 Back     alignment and structure
>pdb|3RVW|A Chain A, Crystal Structure Of Der P 1 Complexed With Fab 4c1 Length = 222 Back     alignment and structure
>pdb|3F5V|A Chain A, C2 Crystal Form Of Mite Allergen Der P 1 Length = 222 Back     alignment and structure
>pdb|2AS8|A Chain A, Crystal Structure Of Mature And Fully Active Der P 1 Allergen Length = 222 Back     alignment and structure
>pdb|3PDF|A Chain A, Discovery Of Novel Cyanamide-Based Inhibitors Of Cathepsin C Length = 441 Back     alignment and structure
>pdb|1DEU|A Chain A, Crystal Structure Of Human Procathepsin X: A Cysteine Protease With The Proregion Covalently Linked To The Active Site Cysteine Length = 277 Back     alignment and structure
>pdb|1EF7|A Chain A, Crystal Structure Of Human Cathepsin X Length = 242 Back     alignment and structure
>pdb|1JQP|A Chain A, Dipeptidyl Peptidase I (Cathepsin C), A Tetrameric Cysteine Protease Of The Papain Family Length = 438 Back     alignment and structure
>pdb|1K3B|C Chain C, Crystal Structure Of Human Dipeptidyl Peptidase I (Cathepsin C): Exclusion Domain Added To An Endopeptidase Framework Creates The Machine For Activation Of Granular Serine Proteases Length = 69 Back     alignment and structure
>pdb|3CBJ|A Chain A, Chagasin-cathepsin B Complex Length = 266 Back     alignment and structure
>pdb|1PBH|A Chain A, Crystal Structure Of Human Recombinant Procathepsin B At 3.2 Angstrom Resolution Length = 317 Back     alignment and structure
>pdb|3AI8|B Chain B, Cathepsin B In Complex With The Nitroxoline Length = 256 Back     alignment and structure
>pdb|3K9M|A Chain A, Cathepsin B In Complex With Stefin A Length = 254 Back     alignment and structure
>pdb|1GMY|A Chain A, Cathepsin B Complexed With Dipeptidyl Nitrile Inhibitor Length = 261 Back     alignment and structure
>pdb|1MIR|A Chain A, Rat Procathepsin B Length = 322 Back     alignment and structure
>pdb|3HHI|A Chain A, Crystal Structure Of Cathepsin B From T. Brucei In Complex With Ca074 Length = 325 Back     alignment and structure
>pdb|1CPJ|A Chain A, Crystal Structures Of Recombinant Rat Cathepsin B And A Cathepsin B-Inhibitor Complex: Implications For Structure- Based Inhibitor Design Length = 260 Back     alignment and structure
>pdb|1CTE|A Chain A, Crystal Structures Of Recombinant Rat Cathepsin B And A Cathepsin B-Inhibitor Complex: Implications For Structure- Based Inhibitor Design Length = 254 Back     alignment and structure
>pdb|4HWY|A Chain A, Trypanosoma Brucei Procathepsin B Solved From 40 Fs Free-electron Laser Pulse Data By Serial Femtosecond X-ray Crystallography Length = 340 Back     alignment and structure
>pdb|3MOR|A Chain A, Crystal Structure Of Cathepsin B From Trypanosoma Brucei Length = 317 Back     alignment and structure
>pdb|1ITO|A Chain A, Crystal Structure Analysis Of Bovine Spleen Cathepsin B- E64c Complex Length = 256 Back     alignment and structure
>pdb|3QSD|A Chain A, Structure Of Cathepsin B1 From Schistosoma Mansoni In Complex With Ca074 Inhibitor Length = 254 Back     alignment and structure
>pdb|1QDQ|A Chain A, X-Ray Crystal Structure Of Bovine Cathepsin B-Ca074 Complex Length = 253 Back     alignment and structure
>pdb|1SP4|B Chain B, Crystal Structure Of Ns-134 In Complex With Bovine Cathepsin B: A Two Headed Epoxysuccinyl Inhibitor Extends Along The Whole Active Site Cleft Length = 205 Back     alignment and structure
>pdb|1HUC|B Chain B, The Refined 2.15 Angstroms X-Ray Crystal Structure Of Human Liver Cathepsin B: The Structural Basis For Its Specificity Length = 205 Back     alignment and structure
>pdb|3F75|P Chain P, Activated Toxoplasma Gondii Cathepsin L (Tgcpl) In Complex With Its Propeptide Length = 106 Back     alignment and structure
>pdb|1ICF|B Chain B, Crystal Structure Of Mhc Class Ii Associated P41 Ii Fragment In Complex With Cathepsin L Length = 42 Back     alignment and structure
>pdb|2WBF|X Chain X, Crystal Structure Analysis Of Sera5e From Plasmodium Falciparum With Loop 690-700 Ordered Length = 265 Back     alignment and structure
>pdb|3CH2|X Chain X, Crystal Structure Analysis Of Sera5e From Plasmodium Falciparum Length = 265 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query348
1pci_A322 Procaricain; zymogen, hydrolase, thiol protease; 3 1e-153
3qj3_A331 Cathepsin L-like protein; hydrolase, proteinase, l 1e-146
1by8_A314 Protein (procathepsin K); hydrolase(sulfhydryl pro 1e-146
2c0y_A315 Procathepsin S; proenzyme, proteinase, hydrolase, 1e-146
3qt4_A329 Cathepsin-L-like midgut cysteine proteinase; hydro 1e-144
2o6x_A310 Procathepsin L1, secreted cathepsin L 1; hydrolase 1e-142
1cs8_A316 Human procathepsin L; prosegment, propeptide, inhi 1e-141
1xkg_A312 DER P I, major mite fecal allergen DER P 1; major 1e-135
1s4v_A229 Cysteine endopeptidase; KDEL ER retention signal, 1e-124
2fo5_A262 Cysteine proteinase EP-B 2; EP-B2, EPB2, EPB, cyst 1e-123
1ppo_A216 Protease omega; hydrolase(thiol protease); 1.80A { 1e-122
3p5u_A220 Actinidin; SAD, cysteine proteinases, hydrolase; 1 1e-122
3ioq_A213 CMS1MS2; caricaceae, cysteine protease, papain fam 1e-121
3f75_A224 Toxopain-2, cathepsin L protease; medical structur 1e-120
1cqd_A221 Protein (protease II); cysteine protease, glycopro 1e-120
2cio_A212 Papain; hydrolase/inhibitor, complex hydrolase/inh 1e-120
2bdz_A214 Mexicain; cysteine protease, peptidase_C1, papain- 1e-120
1iwd_A215 Ervatamin B; cysteine protease, alpha-beta protein 1e-118
1yal_A218 Chymopapain; hydrolase, thiol protease; 1.70A {Car 1e-118
2b1m_A246 SPE31; papain-like, sugar binding protein; HET: NA 1e-117
2oul_A241 Falcipain 2; cysteine protease, inhibitor, macromo 1e-116
3bwk_A243 Cysteine protease falcipain-3; malaria, hydrolase; 1e-115
8pch_A220 Cathepsin H; hydrolase, protease, cysteine protein 1e-113
3i06_A215 Cruzipain; autocatalytic cleavage, glycoprotein, p 1e-113
3ovx_A218 Cathepsin S; hydrolase, covalent inhibitor, aldehy 1e-112
1m6d_A214 Cathepsin F, catsf; papain family cysteine proteas 1e-109
3kwz_A215 Cathepsin K; enzyme inhibitor, covalent reversible 1e-109
2xu3_A220 Cathepsin L1; hydrolase, drug design, thiol protea 1e-108
3f5v_A222 DER P 1 allergen; allergy, asthma, DUST mites, gly 1e-106
1o0e_A208 Ervatamin C; plant cysteine protease, two domain, 1e-102
3pdf_A441 Cathepsin C, dipeptidyl peptidase 1; two domains, 2e-97
2wbf_X265 Serine-repeat antigen protein; SERA, malaria, vacu 1e-90
3u8e_A222 Papain-like cysteine protease; papain-like cystein 5e-87
1deu_A277 Procathepsin X; cysteine protease, proregion, pros 2e-79
3hhi_A325 Cathepsin B-like cysteine protease; occluding loop 2e-77
3pbh_A317 Procathepsin B; thiol protease, cysteine protease, 2e-71
3qsd_A254 Cathepsin B-like peptidase (C01 family); cysteine 2e-70
3cbj_A266 Cathepsin B; cathepsin B, occluding loop, chagas d 2e-63
3ois_A291 Cysteine protease; alpha and beta, hydrolase; HET: 2e-59
3f75_P106 Toxopain-2, cathepsin L propeptide; medical struct 1e-29
2l95_A80 Crammer, LP06209P; cysteine proteinase inhibitor, 5e-21
3pw3_A383 Aminopeptidase C; bleomycin, cysteine proteinase f 2e-08
2e01_A457 Cysteine proteinase 1; bleomycin hydrolase, thiol 9e-05
2cb5_A453 Protein (bleomycin hydrolase); aminopeptidase, cys 7e-04
>1pci_A Procaricain; zymogen, hydrolase, thiol protease; 3.20A {Carica papaya} SCOP: d.3.1.1 Length = 322 Back     alignment and structure
 Score =  431 bits (1111), Expect = e-153
 Identities = 121/316 (38%), Positives = 170/316 (53%), Gaps = 20/316 (6%)

Query: 27  EGSIAEKFEQWKAQYGRTYKESAENSKRFEIFKDNLVAVERFNNAAIGNRSYTLRLNKFA 86
              + + F  W   + + Y+   E   RFEIFKDNL  ++  N     N SY L LN+FA
Sbjct: 15  TERLIQLFNSWMLNHNKFYENVDEKLYRFEIFKDNLNYIDETNK---KNNSYWLGLNEFA 71

Query: 87  DLTPQEFIASQTGFKMSDHSSSLKANGTPFLYKS-SQVPPSVNWIEKGAVTPVKYQGQC- 144
           DL+  EF     G  +       ++    F+ +    +P +V+W +KGAVTPV++QG C 
Sbjct: 72  DLSNDEFNEKYVGSLIDATIE--QSYDEEFINEDIVNLPENVDWRKKGAVTPVRHQGSCG 129

Query: 145 ------AVAAVEGINAIKINRLVSLSEQQLVDCATNDNNNGCYGGFMDDAFKYIIQNKGI 198
                 AVA VEGIN I+  +LV LSEQ+LVDC     ++GC GG+   A +Y+ +N GI
Sbjct: 130 SCWAFSAVATVEGINKIRTGKLVELSEQELVDCERR--SHGCKGGYPPYALEYVAKN-GI 186

Query: 199 TNDAVYSYEGMSTGICDSIKAEDHAAQITNYEDVPPNDEESLLKAVANQPVSVAIDAS-- 256
              + Y Y+    G C + +      + +    V PN+E +LL A+A QPVSV +++   
Sbjct: 187 HLRSKYPYKAKQ-GTCRAKQVGGPIVKTSGVGRVQPNNEGNLLNAIAKQPVSVVVESKGR 245

Query: 257 ALQFYSGGVFNGYCETFLNHGVTAVGYGTSEEGIKYWLIKNSWGQDWGEDGYFRLQRDID 316
             Q Y GG+F G C T ++  VTAVGYG    G  Y LIKNSWG  WGE GY R++R   
Sbjct: 246 PFQLYKGGIFEGPCGTKVDGAVTAVGYGK-SGGKGYILIKNSWGTAWGEKGYIRIKRAPG 304

Query: 317 QPQGQCGIAMFASFPV 332
              G CG+   + +P 
Sbjct: 305 NSPGVCGLYKSSYYPT 320
>3qj3_A Cathepsin L-like protein; hydrolase, proteinase, larVal midgut; 1.85A {Tenebrio molitor} Length = 331 Back     alignment and structure
>1by8_A Protein (procathepsin K); hydrolase(sulfhydryl proteinase), papain; 2.60A {Homo sapiens} SCOP: d.3.1.1 PDB: 7pck_A Length = 314 Back     alignment and structure
>2c0y_A Procathepsin S; proenzyme, proteinase, hydrolase, thiol protease, prosegment binding loop, glycoprotein, lysosome, protease, zymogen; 2.1A {Homo sapiens} Length = 315 Back     alignment and structure
>3qt4_A Cathepsin-L-like midgut cysteine proteinase; hydrolase, zymogen, intramolecular DISS bonds, insect larVal midgut; HET: PG4 PG6; 2.11A {Tenebrio molitor} Length = 329 Back     alignment and structure
>2o6x_A Procathepsin L1, secreted cathepsin L 1; hydrolase, thiol protease, cysteine protease, zymogen, hydro; 1.40A {Fasciola hepatica} Length = 310 Back     alignment and structure
>1cs8_A Human procathepsin L; prosegment, propeptide, inhibition, hydrolase; HET: OCS; 1.80A {Homo sapiens} SCOP: d.3.1.1 PDB: 1cjl_A 3hwn_A* Length = 316 Back     alignment and structure
>1xkg_A DER P I, major mite fecal allergen DER P 1; major allergen, cysteine protease, house DUST mite, dermatop pteronyssinus; 1.61A {Dermatophagoides pteronyssinus} SCOP: d.3.1.1 Length = 312 Back     alignment and structure
>1s4v_A Cysteine endopeptidase; KDEL ER retention signal, endosperm, ricinosomes, SEED germi senescence, hydrolase-hydrolase inhibitor complex; 2.00A {Ricinus communis} SCOP: d.3.1.1 Length = 229 Back     alignment and structure
>2fo5_A Cysteine proteinase EP-B 2; EP-B2, EPB2, EPB, cysteine endoprotease, endopeptidase, LEUP hydrolase; HET: AR7; 2.20A {Hordeum vulgare} Length = 262 Back     alignment and structure
>1ppo_A Protease omega; hydrolase(thiol protease); 1.80A {Carica papaya} SCOP: d.3.1.1 PDB: 1meg_A* Length = 216 Back     alignment and structure
>3ioq_A CMS1MS2; caricaceae, cysteine protease, papain family, hydrolase; HET: E64 SO4; 1.87A {Carica candamarcensis} Length = 213 Back     alignment and structure
>3f75_A Toxopain-2, cathepsin L protease; medical structural genomics of pathogenic protozoa, MSGPP, C protease, parasite, protozoa, hydrolase; 1.99A {Toxoplasma gondii} Length = 224 Back     alignment and structure
>1cqd_A Protein (protease II); cysteine protease, glycoprotein, proline specificity, carboh papain family, hydrolase; HET: NAG FUL FUC; 2.10A {Zingiber officinale} SCOP: d.3.1.1 Length = 221 Back     alignment and structure
>2cio_A Papain; hydrolase/inhibitor, complex hydrolase/inhibitor, ICP, cysteine protease, allergen, protease, thiol protease; 1.5A {Carica papaya} PDB: 1khq_A 1khp_A 1ppn_A 3e1z_B 3ima_A 3lfy_A 9pap_A 1bqi_A* 1bp4_A* 1pad_A 1pe6_A* 1pip_A* 1pop_A* 1ppd_A 1ppp_A* 1stf_E* 2pad_A 4pad_A* 5pad_A* 6pad_A* ... Length = 212 Back     alignment and structure
>2bdz_A Mexicain; cysteine protease, peptidase_C1, papain-like, HYDR; HET: E64; 2.10A {Jacaratia mexicana} Length = 214 Back     alignment and structure
>1iwd_A Ervatamin B; cysteine protease, alpha-beta protein, catalytic DYAD, L-DOM domain., hydrolase; 1.63A {Tabernaemontana divaricata} SCOP: d.3.1.1 Length = 215 Back     alignment and structure
>1yal_A Chymopapain; hydrolase, thiol protease; 1.70A {Carica papaya} SCOP: d.3.1.1 PDB: 1gec_E* Length = 218 Back     alignment and structure
>2b1m_A SPE31; papain-like, sugar binding protein; HET: NAG FUC PG4; 2.00A {Pachyrhizus erosus} PDB: 2b1n_A* Length = 246 Back     alignment and structure
>2oul_A Falcipain 2; cysteine protease, inhibitor, macromolecular interaction, HY hydrolase inhibitor complex; 2.20A {Plasmodium falciparum} SCOP: d.3.1.1 PDB: 2ghu_A 1yvb_A 3bpf_A* 3pnr_A Length = 241 Back     alignment and structure
>3bwk_A Cysteine protease falcipain-3; malaria, hydrolase; HET: C1P; 2.42A {Plasmodium falciparum} PDB: 3bpm_A* Length = 243 Back     alignment and structure
>8pch_A Cathepsin H; hydrolase, protease, cysteine proteinase, aminopeptidase; HET: NAG BMA; 2.10A {Sus scrofa} SCOP: d.3.1.1 PDB: 1nb3_A* 1nb5_A* Length = 220 Back     alignment and structure
>3i06_A Cruzipain; autocatalytic cleavage, glycoprotein, protease, thiol protease, zymogen; HET: QL2; 1.10A {Trypanosoma cruzi} PDB: 1ewm_A* 1ewo_A* 1ewl_A* 1f29_A* 1ewp_A* 1f2b_A* 1f2c_A* 1f2a_A* 1me4_A* 1u9q_X* 2aim_A* 2efm_A* 2oz2_A* 1me3_A* 3kku_A* 3lxs_A* 1aim_A* 3iut_A* 3hd3_A* 2p86_A* ... Length = 215 Back     alignment and structure
>3ovx_A Cathepsin S; hydrolase, covalent inhibitor, aldehyde warhead is covalently bound to Cys25, lysosomeal protein; HET: O64; 1.49A {Homo sapiens} PDB: 2h7j_A* 2f1g_A* 2hh5_B* 2hhn_A* 2hxz_A* 2op3_A* 2frq_A* 2fra_A* 2fq9_A* 2ft2_A* 2fud_A* 2g7y_A* 1ms6_A* 2r9m_A* 2r9n_A* 2r9o_A* 3n3g_A* 3n4c_A* 3mpe_A* 1nqc_A* ... Length = 218 Back     alignment and structure
>1m6d_A Cathepsin F, catsf; papain family cysteine protease, hydrolase; HET: MYP; 1.70A {Homo sapiens} SCOP: d.3.1.1 Length = 214 Back     alignment and structure
>3kwz_A Cathepsin K; enzyme inhibitor, covalent reversible inhibitor, disease mutation, disulfide bond, glycoprotein, hydrolase, lysosome, protease; HET: KWZ; 1.49A {Homo sapiens} PDB: 1au0_A* 1au2_A* 1au3_A* 1au4_A* 1ayu_A* 1ayv_A* 1ayw_A* 1bgo_A* 1atk_A* 1nl6_A* 1nlj_A* 1q6k_A* 1mem_A* 1yk7_A* 1yk8_A* 1yt7_A* 2ato_A* 2aux_A* 2auz_A* 2bdl_A* ... Length = 215 Back     alignment and structure
>2xu3_A Cathepsin L1; hydrolase, drug design, thiol protease; HET: XU3 BTB; 0.90A {Homo sapiens} PDB: 2xu4_A* 2xu5_A* 2yj2_A* 2yj8_A* 2yj9_A* 2yjb_A* 2yjc_A* 3bc3_A* 3h89_A* 3h8b_A* 3h8c_A* 3of9_A* 3of8_A* 3hha_A* 2xu1_A* 3iv2_A* 3k24_A* 2nqd_B* 3kse_A* 2vhs_A ... Length = 220 Back     alignment and structure
>1o0e_A Ervatamin C; plant cysteine protease, two domain, stable at PH 2-12, HYDR; 1.90A {Tabernaemontana divaricata} SCOP: d.3.1.1 PDB: 2pns_A* 2pre_A* 3bcn_A* Length = 208 Back     alignment and structure
>3pdf_A Cathepsin C, dipeptidyl peptidase 1; two domains, cystein protease, hydrolase-hydrolase inhibitor; HET: LXV NAG; 1.85A {Homo sapiens} PDB: 1jqp_A* 2djf_B* 1k3b_B* 2djg_B* 2djf_A* 1k3b_A* 2djg_A* 2djf_C* 1k3b_C* 2djg_C* Length = 441 Back     alignment and structure
>2wbf_X Serine-repeat antigen protein; SERA, malaria, vacuole, protease, cathepsin, hydrolase, glycoprotein, thiol protease; HET: DMS; 1.60A {Plasmodium falciparum} PDB: 3ch3_X 3ch2_X Length = 265 Back     alignment and structure
>3u8e_A Papain-like cysteine protease; papain-like cysteine peptidase, peptidase_C1A, hydrolase, in form; 1.31A {Crocus sativus} Length = 222 Back     alignment and structure
>1deu_A Procathepsin X; cysteine protease, proregion, prosegment, HY; 1.70A {Homo sapiens} SCOP: d.3.1.1 PDB: 1ef7_A Length = 277 Back     alignment and structure
>3hhi_A Cathepsin B-like cysteine protease; occluding loop, hydrolase, THIO protease; HET: 074; 1.60A {Trypanosoma brucei} PDB: 3mor_A* Length = 325 Back     alignment and structure
>3pbh_A Procathepsin B; thiol protease, cysteine protease, proenzyme, papain; 2.50A {Homo sapiens} SCOP: d.3.1.1 PDB: 2pbh_A 1pbh_A 1mir_A Length = 317 Back     alignment and structure
>3qsd_A Cathepsin B-like peptidase (C01 family); cysteine peptidase, digestive tract, hydrolase-hydrolase INH complex; HET: 074; 1.30A {Schistosoma mansoni} PDB: 3s3q_A* 3s3r_A* Length = 254 Back     alignment and structure
>3cbj_A Cathepsin B; cathepsin B, occluding loop, chagas disease, glyco hydrolase, lysosome, protease, thiol protease, zymogen, CYT vesicle; 1.80A {Homo sapiens} PDB: 3cbk_A 1gmy_A* 3ai8_B* 3k9m_A 1the_A* 1cpj_A* 1cte_A 2dcc_A* 2dc6_A* 1ito_A* 2dc8_A* 2dc9_A* 2dca_A* 2dcb_A* 2dc7_A* 2dcd_A* 1qdq_A* 1csb_B* 1huc_B 2ipp_B ... Length = 266 Back     alignment and structure
>3ois_A Cysteine protease; alpha and beta, hydrolase; HET: UDP; 1.65A {Xylella fastidiosa} Length = 291 Back     alignment and structure
>3f75_P Toxopain-2, cathepsin L propeptide; medical structural genomics of pathogenic protozoa, MSGPP, C protease, parasite, protozoa, hydrolase; 1.99A {Toxoplasma gondii} Length = 106 Back     alignment and structure
>2l95_A Crammer, LP06209P; cysteine proteinase inhibitor, intrinsic disorder P like protein, hydrolase; NMR {Drosophila melanogaster} Length = 80 Back     alignment and structure
>3pw3_A Aminopeptidase C; bleomycin, cysteine proteinase fold, structural genomics, JO center for structural genomics, JCSG; HET: MSE; 2.23A {Parabacteroides distasonis} Length = 383 Back     alignment and structure
>2e01_A Cysteine proteinase 1; bleomycin hydrolase, thiol protease, C1 protease, hydrolase; 1.73A {Saccharomyces cerevisiae} PDB: 2e02_A 2e03_A 2dzy_A 1a6r_A 2e00_A 2dzz_A 3gcb_A 1gcb_A Length = 457 Back     alignment and structure
>2cb5_A Protein (bleomycin hydrolase); aminopeptidase, cysteine protease, SELF- compartmentalizing, cylinase; 1.85A {Homo sapiens} SCOP: d.3.1.1 PDB: 1cb5_A Length = 453 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query348
3tnx_A363 Papain; hydrolase, cytoplasm for recombinant expre 100.0
3qj3_A331 Cathepsin L-like protein; hydrolase, proteinase, l 100.0
3qt4_A329 Cathepsin-L-like midgut cysteine proteinase; hydro 100.0
1pci_A322 Procaricain; zymogen, hydrolase, thiol protease; 3 100.0
2c0y_A315 Procathepsin S; proenzyme, proteinase, hydrolase, 100.0
1cs8_A316 Human procathepsin L; prosegment, propeptide, inhi 100.0
1by8_A314 Protein (procathepsin K); hydrolase(sulfhydryl pro 100.0
2o6x_A310 Procathepsin L1, secreted cathepsin L 1; hydrolase 100.0
1xkg_A312 DER P I, major mite fecal allergen DER P 1; major 100.0
3pdf_A441 Cathepsin C, dipeptidyl peptidase 1; two domains, 100.0
3hhi_A325 Cathepsin B-like cysteine protease; occluding loop 100.0
3p5u_A220 Actinidin; SAD, cysteine proteinases, hydrolase; 1 100.0
1s4v_A229 Cysteine endopeptidase; KDEL ER retention signal, 100.0
3pbh_A317 Procathepsin B; thiol protease, cysteine protease, 100.0
2fo5_A262 Cysteine proteinase EP-B 2; EP-B2, EPB2, EPB, cyst 100.0
1cqd_A221 Protein (protease II); cysteine protease, glycopro 100.0
1ppo_A216 Protease omega; hydrolase(thiol protease); 1.80A { 100.0
1iwd_A215 Ervatamin B; cysteine protease, alpha-beta protein 100.0
1yal_A218 Chymopapain; hydrolase, thiol protease; 1.70A {Car 100.0
3u8e_A222 Papain-like cysteine protease; papain-like cystein 100.0
2cio_A212 Papain; hydrolase/inhibitor, complex hydrolase/inh 100.0
2xu3_A220 Cathepsin L1; hydrolase, drug design, thiol protea 100.0
3ioq_A213 CMS1MS2; caricaceae, cysteine protease, papain fam 100.0
2b1m_A246 SPE31; papain-like, sugar binding protein; HET: NA 100.0
3ovx_A218 Cathepsin S; hydrolase, covalent inhibitor, aldehy 100.0
3kwz_A215 Cathepsin K; enzyme inhibitor, covalent reversible 100.0
2bdz_A214 Mexicain; cysteine protease, peptidase_C1, papain- 100.0
1o0e_A208 Ervatamin C; plant cysteine protease, two domain, 100.0
8pch_A220 Cathepsin H; hydrolase, protease, cysteine protein 100.0
2oul_A241 Falcipain 2; cysteine protease, inhibitor, macromo 100.0
3f75_A224 Toxopain-2, cathepsin L protease; medical structur 100.0
1m6d_A214 Cathepsin F, catsf; papain family cysteine proteas 100.0
3bwk_A243 Cysteine protease falcipain-3; malaria, hydrolase; 100.0
3i06_A215 Cruzipain; autocatalytic cleavage, glycoprotein, p 100.0
3f5v_A222 DER P 1 allergen; allergy, asthma, DUST mites, gly 100.0
3cbj_A266 Cathepsin B; cathepsin B, occluding loop, chagas d 100.0
1deu_A277 Procathepsin X; cysteine protease, proregion, pros 100.0
3qsd_A254 Cathepsin B-like peptidase (C01 family); cysteine 100.0
2wbf_X265 Serine-repeat antigen protein; SERA, malaria, vacu 100.0
3ois_A291 Cysteine protease; alpha and beta, hydrolase; HET: 100.0
2cb5_A453 Protein (bleomycin hydrolase); aminopeptidase, cys 100.0
2e01_A457 Cysteine proteinase 1; bleomycin hydrolase, thiol 100.0
3pw3_A383 Aminopeptidase C; bleomycin, cysteine proteinase f 99.96
3f75_P106 Toxopain-2, cathepsin L propeptide; medical struct 99.78
2l95_A80 Crammer, LP06209P; cysteine proteinase inhibitor, 99.74
1pxv_A183 Cysteine protease; hydrolase; 1.80A {Staphylococcu 95.95
1cv8_A174 Staphopain; cysteine protease, thiol protease, pap 95.73
1x9y_A367 Cysteine proteinase; half-barrel, barrel-sandwich- 95.41
3erv_A236 Putative C39-like peptidase; structural genomics, 90.49
>3tnx_A Papain; hydrolase, cytoplasm for recombinant expression; 2.62A {Carica papaya} Back     alignment and structure
Probab=100.00  E-value=1.4e-81  Score=602.27  Aligned_cols=297  Identities=40%  Similarity=0.714  Sum_probs=260.1

Q ss_pred             CCChhhHHHHHHHHHHHhCCccCChHHHHHHHHHHHHHHHHHHHhcccccCCCcEEEEcccCCCCCHHHHHHhhcCcCCC
Q 043883           24 TFDEGSIAEKFEQWKAQYGRTYKESAENSKRFEIFKDNLVAVERFNNAAIGNRSYTLRLNKFADLTPQEFIASQTGFKMS  103 (348)
Q Consensus        24 ~~~~~~~~~~f~~f~~~~~k~Y~s~~E~~~R~~iF~~n~~~I~~~N~~~~~~~s~~~g~N~FsD~t~eEf~~~~~~~~~~  103 (348)
                      ..+++.+.++|++||.+|+|.|.+.+|+.+|+.||++|+++|++||++   +.+|++|+|+|+|||.|||++++++....
T Consensus        56 l~s~~~~~~lf~~f~~~~~K~Y~~~~E~~~R~~iF~~Nl~~I~~~N~~---~~sy~~g~N~FaDlT~eEf~~~~~~~~~~  132 (363)
T 3tnx_A           56 LTSTERLIQLFESWMLKHNKIYKNIDEKIYRFEIFKDNLKYIDETNKK---NNSYWLGLNVFADMSNDEFKEKYTGSIAG  132 (363)
T ss_dssp             SSCHHHHHHHHHHHHHHTTCCCSSHHHHHHHHHHHHHHHHHHHHHTTS---CCSEEECSCTTTTSCHHHHHHHHSCSSCS
T ss_pred             hcCHHHHHHHHHHHHHHcCCcCCCHHHHHHHHHHHHHHHHHHHHHHcC---CCCeEEeccccccCCHHHHHHHhcccccc
Confidence            345678889999999999999999999999999999999999999997   68999999999999999999998875543


Q ss_pred             CCcccccCCCCccccC-CCCCCCceecccCCCCCcccccccc-------HHHHHHHHHHHHcCCCcCCCHHHHHhhcCCC
Q 043883          104 DHSSSLKANGTPFLYK-SSQVPPSVNWIEKGAVTPVKYQGQC-------AVAAVEGINAIKINRLVSLSEQQLVDCATND  175 (348)
Q Consensus       104 ~~~~~~~~~~~~~~~~-~~~lP~~~Dwr~~g~v~pv~dQg~C-------a~~~~e~~~~i~~~~~~~lS~q~l~dC~~~~  175 (348)
                      ......... ...... ..+||++||||++|.|+||||||.|       +++++|++++|++++++.||+|+|+||+.. 
T Consensus       133 ~~~~~~~~~-~~~~~~~~~~lP~s~DWR~~g~VtpVkdQG~CGSCWAFsa~~alE~~~~i~tg~~~~LSeQ~LvdC~~~-  210 (363)
T 3tnx_A          133 NYTTTELSY-EEVLNDGDVNIPEYVDWRQKGAVTPVKNQGSCGSAWAFSAVSTIESIIKIRTGNLNEYSEQELLDCDRR-  210 (363)
T ss_dssp             CCCCSSSSS-SCCCCCSCCCCCSCEEGGGGTCCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCTT-
T ss_pred             ccccccccc-ccccCcccCCCCcceecccCCCCCCCccCCcCCchhhhhhcccHHHHHHHHcCCCCCcCHHHHhcccCC-
Confidence            321111010 111111 2679999999999999999999977       788999999999999999999999999874 


Q ss_pred             CCCCCCCCchhHHHHHHHHcCCCCCCCcccccCCcCCCCCCcccCCccEEEeeeEecCCCCHHHHHHHHHcCCeEEEEec
Q 043883          176 NNNGCYGGFMDDAFKYIIQNKGITNDAVYSYEGMSTGICDSIKAEDHAAQITNYEDVPPNDEESLLKAVANQPVSVAIDA  255 (348)
Q Consensus       176 ~~~gC~GG~~~~a~~~~~~~~Gi~~e~~yPY~~~~~~~C~~~~~~~~~~~i~~~~~v~~~~~~~lk~~l~~GPV~v~i~~  255 (348)
                       +.||+||++..|++|+.+. ||++|++|||.+. .+.|..........++.++..++..++.+++.+|++|||+|+|++
T Consensus       211 -~~GC~GG~~~~a~~yi~~~-Gi~~e~~yPY~~~-~~~c~~~~~~~~~~~~~~~~~~~~~~e~~l~~~v~~gPvsvai~a  287 (363)
T 3tnx_A          211 -SYGCNGGYPWSALQLVAQY-GIHYRNTYPYEGV-QRYCRSREKGPYAAKTDGVRQVQPYNEGALLYSIANQPVSVVLEA  287 (363)
T ss_dssp             -SCTTBCCCHHHHHHHHHHT-CBCBTTTSCCCSS-CCCCCGGGGCSCSBCCCEEEEECSSCHHHHHHHHTTSCEEEEECC
T ss_pred             -CCCCCCCChHHHHhHHHhc-CccccccCCCcCc-CCCcccCCCCCceeeccceEEcchhhHHHHHHHHHcCCcEEEEEe
Confidence             7899999999999999876 9999999999998 777765544455677888888888899999999999999999997


Q ss_pred             C--ccccccCceEcCCCCCCCCeEEEEEEeeecCCCceEEEEEcCCCCCCCCCcEEEEEecCCCCCCccccccccceeee
Q 043883          256 S--ALQFYSGGVFNGYCETFLNHGVTAVGYGTSEEGIKYWLIKNSWGQDWGEDGYFRLQRDIDQPQGQCGIAMFASFPVS  333 (348)
Q Consensus       256 ~--~f~~Y~~Giy~~~c~~~~~Hav~iVGyg~~~~g~~yWiikNSWG~~WGe~GY~~i~~~~~~~~~~Cgi~~~~~~p~~  333 (348)
                      .  +|++|++|||..+|+..+||||+|||||++     |||||||||++|||+|||||+||.++..|+|||++.++||+ 
T Consensus       288 ~~~~F~~Y~sGVy~~~~~~~lnHaV~iVGyG~~-----YWIVKNSWGt~WGe~GY~rI~Rg~~~~~~~CGI~~~a~yPi-  361 (363)
T 3tnx_A          288 AGKDFQLYRGGIFVGPCGNKVDHAVAAVGYGPN-----YILIRNSWGTGWGENGYIRIKRGTGNSYGVCGLYTSSFYPV-  361 (363)
T ss_dssp             CSHHHHTEEEEEECCCCCSCCCEEEEEEEEETT-----EEEEECSBCTTSTBTTEEEEECCSCCSSCGGGTTSCEEEEE-
T ss_pred             cchhhhCCCCCEECCCCCCCCCeEEEEEEcCCC-----cEEEEeCCCCccccCcEEEEEcCCCCCCCcCCccceeeecc-
Confidence            6  899999999999999899999999999974     99999999999999999999999987678999999999999 


Q ss_pred             c
Q 043883          334 K  334 (348)
Q Consensus       334 ~  334 (348)
                      +
T Consensus       362 k  362 (363)
T 3tnx_A          362 K  362 (363)
T ss_dssp             C
T ss_pred             c
Confidence            5
>3qj3_A Cathepsin L-like protein; hydrolase, proteinase, larVal midgut; 1.85A {Tenebrio molitor} SCOP: d.3.1.0 Back     alignment and structure
>3qt4_A Cathepsin-L-like midgut cysteine proteinase; hydrolase, zymogen, intramolecular DISS bonds, insect larVal midgut; HET: PG4 PG6; 2.11A {Tenebrio molitor} Back     alignment and structure
>1pci_A Procaricain; zymogen, hydrolase, thiol protease; 3.20A {Carica papaya} SCOP: d.3.1.1 Back     alignment and structure
>2c0y_A Procathepsin S; proenzyme, proteinase, hydrolase, thiol protease, prosegment binding loop, glycoprotein, lysosome, protease, zymogen; 2.1A {Homo sapiens} Back     alignment and structure
>1cs8_A Human procathepsin L; prosegment, propeptide, inhibition, hydrolase; HET: OCS; 1.80A {Homo sapiens} SCOP: d.3.1.1 PDB: 1cjl_A 3hwn_A* Back     alignment and structure
>1by8_A Protein (procathepsin K); hydrolase(sulfhydryl proteinase), papain; 2.60A {Homo sapiens} SCOP: d.3.1.1 PDB: 7pck_A Back     alignment and structure
>2o6x_A Procathepsin L1, secreted cathepsin L 1; hydrolase, thiol protease, cysteine protease, zymogen, hydro; 1.40A {Fasciola hepatica} Back     alignment and structure
>1xkg_A DER P I, major mite fecal allergen DER P 1; major allergen, cysteine protease, house DUST mite, dermatop pteronyssinus; 1.61A {Dermatophagoides pteronyssinus} SCOP: d.3.1.1 Back     alignment and structure
>3pdf_A Cathepsin C, dipeptidyl peptidase 1; two domains, cystein protease, hydrolase-hydrolase inhibitor; HET: LXV NAG; 1.85A {Homo sapiens} PDB: 1jqp_A* 2djf_B* 1k3b_B* 2djg_B* 2djf_A* 1k3b_A* 2djg_A* 2djf_C* 1k3b_C* 2djg_C* Back     alignment and structure
>3hhi_A Cathepsin B-like cysteine protease; occluding loop, hydrolase, THIO protease; HET: 074; 1.60A {Trypanosoma brucei} SCOP: d.3.1.0 PDB: 4hwy_A* 3mor_A* Back     alignment and structure
>1s4v_A Cysteine endopeptidase; KDEL ER retention signal, endosperm, ricinosomes, SEED germi senescence, hydrolase-hydrolase inhibitor complex; 2.00A {Ricinus communis} SCOP: d.3.1.1 Back     alignment and structure
>3pbh_A Procathepsin B; thiol protease, cysteine protease, proenzyme, papain; 2.50A {Homo sapiens} SCOP: d.3.1.1 PDB: 2pbh_A 1pbh_A 1mir_A Back     alignment and structure
>2fo5_A Cysteine proteinase EP-B 2; EP-B2, EPB2, EPB, cysteine endoprotease, endopeptidase, LEUP hydrolase; HET: AR7; 2.20A {Hordeum vulgare} Back     alignment and structure
>1cqd_A Protein (protease II); cysteine protease, glycoprotein, proline specificity, carboh papain family, hydrolase; HET: NAG FUL FUC; 2.10A {Zingiber officinale} SCOP: d.3.1.1 Back     alignment and structure
>1ppo_A Protease omega; hydrolase(thiol protease); 1.80A {Carica papaya} SCOP: d.3.1.1 PDB: 1meg_A* Back     alignment and structure
>1iwd_A Ervatamin B; cysteine protease, alpha-beta protein, catalytic DYAD, L-DOM domain., hydrolase; 1.63A {Tabernaemontana divaricata} SCOP: d.3.1.1 Back     alignment and structure
>1yal_A Chymopapain; hydrolase, thiol protease; 1.70A {Carica papaya} SCOP: d.3.1.1 PDB: 1gec_E* Back     alignment and structure
>3u8e_A Papain-like cysteine protease; papain-like cysteine peptidase, peptidase_C1A, hydrolase, in form; 1.31A {Crocus sativus} SCOP: d.3.1.0 Back     alignment and structure
>2cio_A Papain; hydrolase/inhibitor, complex hydrolase/inhibitor, ICP, cysteine protease, allergen, protease, thiol protease; 1.5A {Carica papaya} PDB: 1khq_A 1khp_A 1ppn_A 3e1z_B 3ima_A 3lfy_A 9pap_A 1bqi_A* 1bp4_A* 1pad_A 1pe6_A* 1pip_A* 1pop_A* 1ppd_A 1ppp_A* 1stf_E* 2pad_A 4pad_A* 5pad_A* 6pad_A* ... Back     alignment and structure
>2xu3_A Cathepsin L1; hydrolase, drug design, thiol protease; HET: XU3 BTB; 0.90A {Homo sapiens} PDB: 2xu4_A* 2xu5_A* 2yj2_A* 2yj8_A* 2yj9_A* 2yjb_A* 2yjc_A* 3bc3_A* 3h89_A* 3h8b_A* 3h8c_A* 3of9_A* 3of8_A* 3hha_A* 2xu1_A* 3iv2_A* 3k24_A* 2nqd_B* 3kse_A* 2vhs_A ... Back     alignment and structure
>3ioq_A CMS1MS2; caricaceae, cysteine protease, papain family, hydrolase; HET: E64 SO4; 1.87A {Carica candamarcensis} SCOP: d.3.1.1 Back     alignment and structure
>2b1m_A SPE31; papain-like, sugar binding protein; HET: NAG FUC PG4; 2.00A {Pachyrhizus erosus} PDB: 2b1n_A* Back     alignment and structure
>3ovx_A Cathepsin S; hydrolase, covalent inhibitor, aldehyde warhead is covalently bound to Cys25, lysosomeal protein; HET: O64; 1.49A {Homo sapiens} SCOP: d.3.1.1 PDB: 2h7j_A* 2f1g_A* 2hh5_B* 2hhn_A* 2hxz_A* 2op3_A* 2frq_A* 2fra_A* 2fq9_A* 2ft2_A* 2fud_A* 2g7y_A* 1ms6_A* 2r9m_A* 2r9n_A* 2r9o_A* 3n3g_A* 3n4c_A* 3mpe_A* 1nqc_A* ... Back     alignment and structure
>3kwz_A Cathepsin K; enzyme inhibitor, covalent reversible inhibitor, disease mutation, disulfide bond, glycoprotein, hydrolase, lysosome, protease; HET: KWZ; 1.49A {Homo sapiens} PDB: 1au0_A* 1au2_A* 1au3_A* 1au4_A* 1ayu_A* 1ayv_A* 1ayw_A* 1bgo_A* 1atk_A* 1nl6_A* 1nlj_A* 1q6k_A* 1mem_A* 1yk7_A* 1yk8_A* 1yt7_A* 2ato_A* 2aux_A* 2auz_A* 2bdl_A* ... Back     alignment and structure
>2bdz_A Mexicain; cysteine protease, peptidase_C1, papain-like, HYDR; HET: E64; 2.10A {Jacaratia mexicana} Back     alignment and structure
>1o0e_A Ervatamin C; plant cysteine protease, two domain, stable at PH 2-12, HYDR; 1.90A {Tabernaemontana divaricata} SCOP: d.3.1.1 PDB: 2pns_A* 2pre_A* 3bcn_A* Back     alignment and structure
>8pch_A Cathepsin H; hydrolase, protease, cysteine proteinase, aminopeptidase; HET: NAG BMA; 2.10A {Sus scrofa} SCOP: d.3.1.1 PDB: 1nb3_A* 1nb5_A* Back     alignment and structure
>2oul_A Falcipain 2; cysteine protease, inhibitor, macromolecular interaction, HY hydrolase inhibitor complex; 2.20A {Plasmodium falciparum} SCOP: d.3.1.1 PDB: 2ghu_A 1yvb_A 3bpf_A* 3pnr_A Back     alignment and structure
>3f75_A Toxopain-2, cathepsin L protease; medical structural genomics of pathogenic protozoa, MSGPP, C protease, parasite, protozoa, hydrolase; 1.99A {Toxoplasma gondii} SCOP: d.3.1.0 Back     alignment and structure
>1m6d_A Cathepsin F, catsf; papain family cysteine protease, hydrolase; HET: MYP; 1.70A {Homo sapiens} SCOP: d.3.1.1 Back     alignment and structure
>3bwk_A Cysteine protease falcipain-3; malaria, hydrolase; HET: C1P; 2.42A {Plasmodium falciparum} PDB: 3bpm_A* Back     alignment and structure
>3i06_A Cruzipain; autocatalytic cleavage, glycoprotein, protease, thiol protease, zymogen; HET: QL2; 1.10A {Trypanosoma cruzi} SCOP: d.3.1.1 PDB: 1ewm_A* 1ewo_A* 1ewl_A* 1f29_A* 1ewp_A* 1f2b_A* 1f2c_A* 1f2a_A* 1me4_A* 1u9q_X* 2aim_A* 2efm_A* 2oz2_A* 1me3_A* 3kku_A* 3lxs_A* 1aim_A* 3iut_A* 3hd3_A* 2p86_A* ... Back     alignment and structure
>3cbj_A Cathepsin B; cathepsin B, occluding loop, chagas disease, glyco hydrolase, lysosome, protease, thiol protease, zymogen, CYT vesicle; 1.80A {Homo sapiens} PDB: 3cbk_A 1gmy_A* 3ai8_B* 3k9m_A 1the_A* 1cpj_A* 1cte_A 2dcc_A* 2dc6_A* 1ito_A* 2dc8_A* 2dc9_A* 2dca_A* 2dcb_A* 2dc7_A* 2dcd_A* 1qdq_A* 1csb_B* 1huc_B 2ipp_B ... Back     alignment and structure
>1deu_A Procathepsin X; cysteine protease, proregion, prosegment, HY; 1.70A {Homo sapiens} SCOP: d.3.1.1 PDB: 1ef7_A Back     alignment and structure
>3qsd_A Cathepsin B-like peptidase (C01 family); cysteine peptidase, digestive tract, hydrolase-hydrolase INH complex; HET: 074; 1.30A {Schistosoma mansoni} SCOP: d.3.1.0 PDB: 3s3q_A* 3s3r_A* Back     alignment and structure
>2wbf_X Serine-repeat antigen protein; SERA, malaria, vacuole, protease, cathepsin, hydrolase, glycoprotein, thiol protease; HET: DMS; 1.60A {Plasmodium falciparum} PDB: 3ch3_X 3ch2_X Back     alignment and structure
>3ois_A Cysteine protease; alpha and beta, hydrolase; HET: UDP; 1.65A {Xylella fastidiosa} Back     alignment and structure
>2cb5_A Protein (bleomycin hydrolase); aminopeptidase, cysteine protease, SELF- compartmentalizing, cylinase; 1.85A {Homo sapiens} SCOP: d.3.1.1 PDB: 1cb5_A Back     alignment and structure
>2e01_A Cysteine proteinase 1; bleomycin hydrolase, thiol protease, C1 protease, hydrolase; 1.73A {Saccharomyces cerevisiae} PDB: 2e02_A 2e03_A 2dzy_A 1a6r_A 2e00_A 2dzz_A 3gcb_A 1gcb_A Back     alignment and structure
>3pw3_A Aminopeptidase C; bleomycin, cysteine proteinase fold, structural genomics, JO center for structural genomics, JCSG; HET: MSE; 2.23A {Parabacteroides distasonis} Back     alignment and structure
>3f75_P Toxopain-2, cathepsin L propeptide; medical structural genomics of pathogenic protozoa, MSGPP, C protease, parasite, protozoa, hydrolase; 1.99A {Toxoplasma gondii} Back     alignment and structure
>2l95_A Crammer, LP06209P; cysteine proteinase inhibitor, intrinsic disorder P like protein, hydrolase; NMR {Drosophila melanogaster} Back     alignment and structure
>1pxv_A Cysteine protease; hydrolase; 1.80A {Staphylococcus aureus} SCOP: d.3.1.1 PDB: 1y4h_A Back     alignment and structure
>1cv8_A Staphopain; cysteine protease, thiol protease, papain family; HET: E64; 1.75A {Staphylococcus aureus} SCOP: d.3.1.1 Back     alignment and structure
>1x9y_A Cysteine proteinase; half-barrel, barrel-sandwich-hybrid, hydrolase; 2.50A {Staphylococcus aureus} SCOP: d.3.1.1 d.17.1.4 Back     alignment and structure
>3erv_A Putative C39-like peptidase; structural genomics, unknown function, PSI-2, protein structure initiative; 2.10A {Bacillus anthracis} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 348
d1cs8a_316 d.3.1.1 (A:) (Pro)cathepsin L {Human (Homo sapiens 1e-70
d1cqda_216 d.3.1.1 (A:) Proline-specific cysteine protease {G 4e-57
d1s4va_224 d.3.1.1 (A:) Vignain (bean endopeptidase) {Castor 7e-56
d1yala_218 d.3.1.1 (A:) Chymopapain {Papaya (Carica papaya) [ 2e-54
d1xkga1302 d.3.1.1 (A:4-305) Major mite fecal allergen der p 2e-53
d2oula1241 d.3.1.1 (A:-16-224) Falcipain 2 {Plasmodium falcip 1e-52
d1aeca_218 d.3.1.1 (A:) Actinidin {Chinese gooseberry or kiwi 1e-52
d2h7ja1217 d.3.1.1 (A:1-217) (Pro)cathepsin S {Human (Homo sa 1e-50
d1ppoa_216 d.3.1.1 (A:) Caricain (protease omega) {Papaya (Ca 1e-50
d1m6da_214 d.3.1.1 (A:) Cathepsin F {Human (Homo sapiens) [Ta 2e-50
d1iwda_215 d.3.1.1 (A:) Ervatamin B {Adam's apple (Ervatamia 3e-50
d1o0ea_208 d.3.1.1 (A:) Ervatamin C {East indian rosebay (Erv 4e-49
d1fh0a_221 d.3.1.1 (A:) (Pro)cathepsin V {Human (Homo sapiens 6e-49
g8pch.1228 d.3.1.1 (P:,A:) Cathepsin H {Pig (Sus scrofa) [Tax 9e-49
d1khqa_212 d.3.1.1 (A:) Papain {Papaya (Carica papaya) [TaxId 2e-46
d1gmya_254 d.3.1.1 (A:) (Pro)cathepsin B {Human (Homo sapiens 3e-45
d2r6na1215 d.3.1.1 (A:1-215) (Pro)cathepsin K {Human (Homo sa 5e-45
d1me4a_215 d.3.1.1 (A:) Cruzain {Trypanosoma cruzi [TaxId: 56 9e-45
g1k3b.1233 d.3.1.1 (B:,C:) Cathepsin C (dipeptidyl peptidase 4e-37
d1deua_275 d.3.1.1 (A:) (Pro)cathepsin X {Human (Homo sapiens 1e-35
d3gcba_458 d.3.1.1 (A:) Bleomycin hydrolase {Baker's yeast (S 1e-09
d2cb5a_453 d.3.1.1 (A:) Bleomycin hydrolase {Human (Homo sapi 3e-07
>d1cs8a_ d.3.1.1 (A:) (Pro)cathepsin L {Human (Homo sapiens) [TaxId: 9606]} Length = 316 Back     information, alignment and structure

class: Alpha and beta proteins (a+b)
fold: Cysteine proteinases
superfamily: Cysteine proteinases
family: Papain-like
domain: (Pro)cathepsin L
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  221 bits (562), Expect = 1e-70
 Identities = 118/325 (36%), Positives = 163/325 (50%), Gaps = 28/325 (8%)

Query: 24  TFDEGSIAEKFEQWKAQYGRTYKESAENSKRFEIFKDNLVAVERFN-NAAIGNRSYTLRL 82
           TFD  S+  ++ +WKA + R Y    E   R  +++ N+  +E  N     G  S+T+ +
Sbjct: 3   TFDH-SLEAQWTKWKAMHNRLYG-MNEEGWRRAVWEKNMKMIELHNQEYREGKHSFTMAM 60

Query: 83  NKFADLTPQEFIASQTGFKMSDHSSSLKANGTPFLYKSSQVPPSVNWIEKGAVTPVKYQG 142
           N F D+T +EF     GF+        +           + P SV+W EKG VTPVK QG
Sbjct: 61  NAFGDMTSEEFRQVMNGFQNRKP----RKGKVFQEPLFYEAPRSVDWREKGYVTPVKNQG 116

Query: 143 QC-------AVAAVEGINAIKINRLVSLSEQQLVDCATNDNNNGCYGGFMDDAFKYIIQN 195
           QC       A  A+EG    K  RL+SLSEQ LVDC+    N GC GG MD AF+Y+  N
Sbjct: 117 QCGSCWAFSATGALEGQMFRKTGRLISLSEQNLVDCSGPQGNEGCNGGLMDYAFQYVQDN 176

Query: 196 KGITNDAVYSYEGMSTGICDSIKAEDHAAQITNYEDVPPNDEESLLKAVANQ-PVSVAID 254
            G+ ++  Y YE        +     ++          P  E++L+KAVA   P+SVAID
Sbjct: 177 GGLDSEESYPYEATEESCKYNP---KYSVANDAGFVDIPKQEKALMKAVATVGPISVAID 233

Query: 255 ASALQF---YSGGVFNGYCETF-LNHGVTAVGYGT---SEEGIKYWLIKNSWGQDWGEDG 307
           A    F     G  F   C +  ++HGV  VGYG      +  KYWL+KNSWG++WG  G
Sbjct: 234 AGHESFLFYKEGIYFEPDCSSEDMDHGVLVVGYGFESTESDNNKYWLVKNSWGEEWGMGG 293

Query: 308 YFRLQRDIDQPQGQCGIAMFASFPV 332
           Y ++ +D       CGIA  AS+P 
Sbjct: 294 YVKMAKDRR---NHCGIASAASYPT 315
>d1cqda_ d.3.1.1 (A:) Proline-specific cysteine protease {Ginger rhizome (Zingiber officinale) [TaxId: 94328]} Length = 216 Back     information, alignment and structure
>d1s4va_ d.3.1.1 (A:) Vignain (bean endopeptidase) {Castor bean (Ricinus communis) [TaxId: 3988]} Length = 224 Back     information, alignment and structure
>d1yala_ d.3.1.1 (A:) Chymopapain {Papaya (Carica papaya) [TaxId: 3649]} Length = 218 Back     information, alignment and structure
>d1xkga1 d.3.1.1 (A:4-305) Major mite fecal allergen der p 1 {House-dust mite (Dermatophagoides pteronyssinus) [TaxId: 6956]} Length = 302 Back     information, alignment and structure
>d2oula1 d.3.1.1 (A:-16-224) Falcipain 2 {Plasmodium falciparum [TaxId: 5833]} Length = 241 Back     information, alignment and structure
>d1aeca_ d.3.1.1 (A:) Actinidin {Chinese gooseberry or kiwifruit (Actinidia chinensis) [TaxId: 3625]} Length = 218 Back     information, alignment and structure
>d2h7ja1 d.3.1.1 (A:1-217) (Pro)cathepsin S {Human (Homo sapiens) [TaxId: 9606]} Length = 217 Back     information, alignment and structure
>d1ppoa_ d.3.1.1 (A:) Caricain (protease omega) {Papaya (Carica papaya) [TaxId: 3649]} Length = 216 Back     information, alignment and structure
>d1m6da_ d.3.1.1 (A:) Cathepsin F {Human (Homo sapiens) [TaxId: 9606]} Length = 214 Back     information, alignment and structure
>d1iwda_ d.3.1.1 (A:) Ervatamin B {Adam's apple (Ervatamia coronaria) [TaxId: 52861]} Length = 215 Back     information, alignment and structure
>d1o0ea_ d.3.1.1 (A:) Ervatamin C {East indian rosebay (Ervatamia coronaria) [TaxId: 52861]} Length = 208 Back     information, alignment and structure
>d1fh0a_ d.3.1.1 (A:) (Pro)cathepsin V {Human (Homo sapiens) [TaxId: 9606]} Length = 221 Back     information, alignment and structure
>d1khqa_ d.3.1.1 (A:) Papain {Papaya (Carica papaya) [TaxId: 3649]} Length = 212 Back     information, alignment and structure
>d1gmya_ d.3.1.1 (A:) (Pro)cathepsin B {Human (Homo sapiens) [TaxId: 9606]} Length = 254 Back     information, alignment and structure
>d2r6na1 d.3.1.1 (A:1-215) (Pro)cathepsin K {Human (Homo sapiens) [TaxId: 9606]} Length = 215 Back     information, alignment and structure
>d1me4a_ d.3.1.1 (A:) Cruzain {Trypanosoma cruzi [TaxId: 5693]} Length = 215 Back     information, alignment and structure
>d1deua_ d.3.1.1 (A:) (Pro)cathepsin X {Human (Homo sapiens) [TaxId: 9606]} Length = 275 Back     information, alignment and structure
>d3gcba_ d.3.1.1 (A:) Bleomycin hydrolase {Baker's yeast (Saccharomyces cerevisiae), Gal6 [TaxId: 4932]} Length = 458 Back     information, alignment and structure
>d2cb5a_ d.3.1.1 (A:) Bleomycin hydrolase {Human (Homo sapiens) [TaxId: 9606]} Length = 453 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query348
d1cs8a_316 (Pro)cathepsin L {Human (Homo sapiens) [TaxId: 960 100.0
d1xkga1302 Major mite fecal allergen der p 1 {House-dust mite 100.0
d1ppoa_216 Caricain (protease omega) {Papaya (Carica papaya) 100.0
d1yala_218 Chymopapain {Papaya (Carica papaya) [TaxId: 3649]} 100.0
d2oula1241 Falcipain 2 {Plasmodium falciparum [TaxId: 5833]} 100.0
d1cqda_216 Proline-specific cysteine protease {Ginger rhizome 100.0
d1s4va_224 Vignain (bean endopeptidase) {Castor bean (Ricinus 100.0
d1khqa_212 Papain {Papaya (Carica papaya) [TaxId: 3649]} 100.0
g8pch.1228 Cathepsin H {Pig (Sus scrofa) [TaxId: 9823]} 100.0
d1iwda_215 Ervatamin B {Adam's apple (Ervatamia coronaria) [T 100.0
d1aeca_218 Actinidin {Chinese gooseberry or kiwifruit (Actini 100.0
d2h7ja1217 (Pro)cathepsin S {Human (Homo sapiens) [TaxId: 960 100.0
d1o0ea_208 Ervatamin C {East indian rosebay (Ervatamia corona 100.0
d1fh0a_221 (Pro)cathepsin V {Human (Homo sapiens) [TaxId: 960 100.0
d2r6na1215 (Pro)cathepsin K {Human (Homo sapiens) [TaxId: 960 100.0
d1m6da_214 Cathepsin F {Human (Homo sapiens) [TaxId: 9606]} 100.0
d1me4a_215 Cruzain {Trypanosoma cruzi [TaxId: 5693]} 100.0
g1k3b.1233 Cathepsin C (dipeptidyl peptidase I), catalytic do 100.0
d1gmya_254 (Pro)cathepsin B {Human (Homo sapiens) [TaxId: 960 100.0
d1deua_275 (Pro)cathepsin X {Human (Homo sapiens) [TaxId: 960 100.0
d3gcba_458 Bleomycin hydrolase {Baker's yeast (Saccharomyces 99.49
d2cb5a_453 Bleomycin hydrolase {Human (Homo sapiens) [TaxId: 99.28
d1pxva_183 Staphopain SspB {Staphylococcus aureus [TaxId: 128 85.2
>d1cs8a_ d.3.1.1 (A:) (Pro)cathepsin L {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
class: Alpha and beta proteins (a+b)
fold: Cysteine proteinases
superfamily: Cysteine proteinases
family: Papain-like
domain: (Pro)cathepsin L
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=8.2e-74  Score=541.64  Aligned_cols=294  Identities=41%  Similarity=0.755  Sum_probs=248.5

Q ss_pred             hhhHHHHHHHHHHHhCCccCChHHHHHHHHHHHHHHHHHHHhcccc-cCCCcEEEEcccCCCCCHHHHHHhhcCcCCCCC
Q 043883           27 EGSIAEKFEQWKAQYGRTYKESAENSKRFEIFKDNLVAVERFNNAA-IGNRSYTLRLNKFADLTPQEFIASQTGFKMSDH  105 (348)
Q Consensus        27 ~~~~~~~f~~f~~~~~k~Y~s~~E~~~R~~iF~~n~~~I~~~N~~~-~~~~s~~~g~N~FsD~t~eEf~~~~~~~~~~~~  105 (348)
                      ++.++.+|++||++|+|+|.+ +|+.+|++||.+|+++|++||+++ .++.+|+||+|+|+|||+|||.++++.......
T Consensus         5 ~~~l~~~F~~f~~~~~K~Y~~-~ee~~R~~iF~~N~~~I~~~N~~~~~~~~~~~~g~N~fsDlt~eEf~~~~~~~~~~~~   83 (316)
T d1cs8a_           5 DHSLEAQWTKWKAMHNRLYGM-NEEGWRRAVWEKNMKMIELHNQEYREGKHSFTMAMNAFGDMTSEEFRQVMNGFQNRKP   83 (316)
T ss_dssp             CGGGHHHHHHHHHHTTCCCCT-THHHHHHHHHHHHHHHHHHHHHHHHTTCCSEEECCCTTTTCCHHHHHHHHCCBCCCCC
T ss_pred             cHHHHHHHHHHHHHhCCcCCC-HHHHHHHHHHHHHHHHHHHHHhHhhcCCCceEEeceeccccCcHHHHhhhcccccccc
Confidence            457788999999999999976 577899999999999999999875 356799999999999999999999876544322


Q ss_pred             cccccCCCCccccC-CCCCCCceecccCCCCCcccccccc-------HHHHHHHHHHHHcCCCcCCCHHHHHhhcCCCCC
Q 043883          106 SSSLKANGTPFLYK-SSQVPPSVNWIEKGAVTPVKYQGQC-------AVAAVEGINAIKINRLVSLSEQQLVDCATNDNN  177 (348)
Q Consensus       106 ~~~~~~~~~~~~~~-~~~lP~~~Dwr~~g~v~pv~dQg~C-------a~~~~e~~~~i~~~~~~~lS~q~l~dC~~~~~~  177 (348)
                      .     ........ ..+||++||||++|+|+||||||.|       +++++|++++++++..+.||+|+|+||+...++
T Consensus        84 ~-----~~~~~~~~~~~~lP~s~Dwr~~g~vtpVkdQG~CGsCwAfa~~~~~E~~~~i~~~~~~~lS~Q~lvdC~~~~~~  158 (316)
T d1cs8a_          84 R-----KGKVFQEPLFYEAPRSVDWREKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGRLISLSEQNLVDCSGPQGN  158 (316)
T ss_dssp             S-----CCEECCCCTTCCCCSCEEGGGGTCCCCCCBCCSSSCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCGGGTC
T ss_pred             c-----cCccccCcccccCCCceECCcCCcccccccCCCCceeeehhhhHHHHHHHHhhcCCcccchhhhhhhccccccC
Confidence            1     00111111 2689999999999999999999977       678899999999999999999999999876678


Q ss_pred             CCCCCCchhHHHHHHHHcCCCCCCCcccccCCcCCCCCCcccCCccEEEeeeEecCCCCHHHHHHHHH-cCCeEEEEecC
Q 043883          178 NGCYGGFMDDAFKYIIQNKGITNDAVYSYEGMSTGICDSIKAEDHAAQITNYEDVPPNDEESLLKAVA-NQPVSVAIDAS  256 (348)
Q Consensus       178 ~gC~GG~~~~a~~~~~~~~Gi~~e~~yPY~~~~~~~C~~~~~~~~~~~i~~~~~v~~~~~~~lk~~l~-~GPV~v~i~~~  256 (348)
                      .||.||++..|++|+..++++.+|..|||.+. ...|... .......+..+.... .+++.|+++|+ +|||+|+|++.
T Consensus       159 ~~c~gg~~~~a~~y~~~~g~~~~e~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~-~~~~~l~~~l~~~gpv~v~i~~~  235 (316)
T d1cs8a_         159 EGCNGGLMDYAFQYVQDNGGLDSEESYPYEAT-EESCKYN-PKYSVANDAGFVDIP-KQEKALMKAVATVGPISVAIDAG  235 (316)
T ss_dssp             CGGGCBCHHHHHHHHHHHTCEEBTTTSCCCSS-CCCCCCC-GGGEEECCCCEEECC-SCHHHHHHHHHHHCCEEEEECCC
T ss_pred             CCCCCCchHHHHHHHHhcCccccccccccccc-ccccccc-ccccccccccccccc-CcHHHHHHHHHHhCCeEEEEEec
Confidence            89999999999999999867889999999987 7777654 223445555666555 58889999998 89999999987


Q ss_pred             --ccccccCceEcCC-CCC-CCCeEEEEEEeeec---CCCceEEEEEcCCCCCCCCCcEEEEEecCCCCCCccccccccc
Q 043883          257 --ALQFYSGGVFNGY-CET-FLNHGVTAVGYGTS---EEGIKYWLIKNSWGQDWGEDGYFRLQRDIDQPQGQCGIAMFAS  329 (348)
Q Consensus       257 --~f~~Y~~Giy~~~-c~~-~~~Hav~iVGyg~~---~~g~~yWiikNSWG~~WGe~GY~~i~~~~~~~~~~Cgi~~~~~  329 (348)
                        +|++|++|||..+ |+. .+||||+|||||.+   .++.+|||||||||++|||+|||||+|+..   |+|||++.++
T Consensus       236 ~~~f~~y~~Gi~~~~~c~~~~~nHaV~iVGyG~d~~~~~g~~YWIikNSWG~~WGe~GY~ri~r~~~---n~CGI~~~~~  312 (316)
T d1cs8a_         236 HESFLFYKEGIYFEPDCSSEDMDHGVLVVGYGFESTESDNNKYWLVKNSWGEEWGMGGYVKMAKDRR---NHCGIASAAS  312 (316)
T ss_dssp             SHHHHTEEEEEECCTTCCSSCCCEEEEEEEEEEECCSSCCEEEEEEECSBCTTSTBTTEEEEECSSS---SGGGTTTSCE
T ss_pred             cchhccccCCcccCCCCCCCcCCEEEEEEEEcccccCCCCCeEEEEEeCCCCCcccCCEEEEeeCCC---CcCccCCeee
Confidence              8999999999774 764 57999999999964   468999999999999999999999999863   5799999999


Q ss_pred             eee
Q 043883          330 FPV  332 (348)
Q Consensus       330 ~p~  332 (348)
                      ||+
T Consensus       313 yP~  315 (316)
T d1cs8a_         313 YPT  315 (316)
T ss_dssp             EEC
T ss_pred             eee
Confidence            998
>d1xkga1 d.3.1.1 (A:4-305) Major mite fecal allergen der p 1 {House-dust mite (Dermatophagoides pteronyssinus) [TaxId: 6956]} Back     information, alignment and structure
>d1ppoa_ d.3.1.1 (A:) Caricain (protease omega) {Papaya (Carica papaya) [TaxId: 3649]} Back     information, alignment and structure
>d1yala_ d.3.1.1 (A:) Chymopapain {Papaya (Carica papaya) [TaxId: 3649]} Back     information, alignment and structure
>d1cqda_ d.3.1.1 (A:) Proline-specific cysteine protease {Ginger rhizome (Zingiber officinale) [TaxId: 94328]} Back     information, alignment and structure
>d1s4va_ d.3.1.1 (A:) Vignain (bean endopeptidase) {Castor bean (Ricinus communis) [TaxId: 3988]} Back     information, alignment and structure
>d1khqa_ d.3.1.1 (A:) Papain {Papaya (Carica papaya) [TaxId: 3649]} Back     information, alignment and structure
>d1iwda_ d.3.1.1 (A:) Ervatamin B {Adam's apple (Ervatamia coronaria) [TaxId: 52861]} Back     information, alignment and structure
>d1aeca_ d.3.1.1 (A:) Actinidin {Chinese gooseberry or kiwifruit (Actinidia chinensis) [TaxId: 3625]} Back     information, alignment and structure
>d2h7ja1 d.3.1.1 (A:1-217) (Pro)cathepsin S {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1o0ea_ d.3.1.1 (A:) Ervatamin C {East indian rosebay (Ervatamia coronaria) [TaxId: 52861]} Back     information, alignment and structure
>d1fh0a_ d.3.1.1 (A:) (Pro)cathepsin V {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2r6na1 d.3.1.1 (A:1-215) (Pro)cathepsin K {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1m6da_ d.3.1.1 (A:) Cathepsin F {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1me4a_ d.3.1.1 (A:) Cruzain {Trypanosoma cruzi [TaxId: 5693]} Back     information, alignment and structure
>d1gmya_ d.3.1.1 (A:) (Pro)cathepsin B {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1deua_ d.3.1.1 (A:) (Pro)cathepsin X {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d3gcba_ d.3.1.1 (A:) Bleomycin hydrolase {Baker's yeast (Saccharomyces cerevisiae), Gal6 [TaxId: 4932]} Back     information, alignment and structure
>d2cb5a_ d.3.1.1 (A:) Bleomycin hydrolase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1pxva_ d.3.1.1 (A:) Staphopain SspB {Staphylococcus aureus [TaxId: 1280]} Back     information, alignment and structure