Citrus Sinensis ID: 043953

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-------800-------810-------820-------830-------840-------850-------860-------87
MSKPRNVTFGNYTISRPGGLEIQVCYPEEFNKYDSPWQRQNPMMRAVPLLATELGFAIVAIRLFIILLKPLHQPRFIPELLTSILIGPSTFGTFESLSPDTIVKQMMKLFPYENTVLLETFSSLGLTFYMFLVGLEMDVSAVKRMEKKSLSIAFAGIVIPFCIGAALHFVPIHEGITRESPNLGALFWAISLTITSFPDLARILSDVKLLHTDIGKTALSSAIVNDLSSWFLLVLVIVAFNHYSKHRHGPALTELGAFLMAMLPIICFILIFWFVLRPCIAWMIKETKKKAGKFSDTHISVILLGVVVCGFIADGCGMHSMAGGFIFGLIIPNGELAINIMERTEEFISGVWLPSFIVVSGLRTNFLELFSKTKLFYLLLTTIVATSAKILSTVLVALCYGMPVRDGVALGGLMNTKGVMALIVLNEGRSLKAIDNILMAAMVFMLLLMTGLVGPIFFLANKKAKRTRKYKQRTIQRRNPDTELRILTCIHSVGNLSGIINLLELSNATKKSPLCVFAVHLVELTRRASAMLIVHDAFRTKTSDQNSIRELADSDLIINAFRHYQDRNDDITVQPLTAVSSFTSIHEDIFEIAEDKVVALILIPFHKQPTADGELQGENHQIREVNNNLLAKAPCSIGILVDRGIGSAVITSAQSSLHGRQGLKLCMLFIGGPDDREALFYAWRMAGKPGVNLTVVRYVYNKDGESGILVEDLNNTEDEDLVDTARDVKEKELDDEFINEFRFKTMYDSSITYNDKMVSNVEELVESITTMYGEYELYIIGRGDNVKSPLTMGLSGWVDNPELGPVGETLVSSNSTAHASVLVVQQSSSALFRSESLQVKRKFGRQKWASPILNPDFEAFENKKKKYY
ccccccccccccEEccccccEEEEEccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHcccccccccccHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHcccHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHcHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHcccHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHccccccccccccEEEEEEcccccHHHHHHHHHHHHHccccccEEEEEEEcccccccccEEEEEcccccccccccHHHHHHHHHHHHHHHHHHHHHcccEEEEEEEEEcccccHHHHHHHHHHHccccEEEEccccccccccccccccHHHHHHHHHHHccccccEEEEEcccccccccccccccccccccEEEEEEEcccccHHHHHHHHHHHHccccEEEEEEEEEEcccccccccccccccccccccccccHHHHccccHHHHHHHHHHHccccccEEEEEEEcccHHHHHHHHHHHcccccEEEEccccccccccccccccccccccccHHHHHHHccccccccEEEEEccccccccccccccccccccccccccccccccHHHHHHHHcccc
cccccccccccccccccccccEEEEcccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHcHHHHHHHHHHHccccHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHccccHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHEEEHHHHcHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHEEccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHcHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccHHccHHccccccccccccccEEEEEEEccccccHHHHHHHHHccccccccEEEEEEEEEEcccccccEEEEcccccccccccccccccccHHHHHHHHHHHHHHcccEEEEEEEEEcccHHHHHHHHHHHHHccEEEEEEEccccccccccEccccHHHHHHHHHHHHccccEEEEEEEccccccccccccccccccccEEEEEEEEccccHHHHHHHHHHHHHccccEEEEEEEEccccccccccccccccccccccccccccHHHHHHcHHHHHHHHHHHcccccEEEEEEEEccHHHHHHHHHHHcccccEEEEEccccccccHHcccHcHHHcccccccHHHcccccccccEEEEEEEEEcccccccccccccccccccccccccccccccHHHHHccccc
mskprnvtfgnytisrpggleiqvcypeefnkydspwqrqnpmmraVPLLATELGFAIVAIRLFIILLkplhqprfipELLTSiligpstfgtfeslspDTIVKQMMKLFPYENTVLLETFSSLGLTFYMFLVGLEMDVSAVKRMEKKSLSIAFAGIVIPFCIGaalhfvpihegitrespnlgALFWAISLTITSFPDLARILSDVKLLHTDIGKTALSSAIVNDLSSWFLLVLVIVAFNhyskhrhgpalTELGAFLMAMLPIICFILIFWFVLRPCIAWMIKETKkkagkfsdtHISVILLGVVVCGFiadgcgmhsmagGFIFgliipngelAINIMERTEEFISGVWLPSFIVVSGLRTNFLELFSKTKLFYLLLTTIVATSAKILSTVLVALCYGmpvrdgvalgglmntKGVMALIVLNEGRSLKAIDNILMAAMVFMLLLMTGLVGPIFFLANKKAKRTRKYKQRtiqrrnpdteLRILTCIHSVGNLSGIINLLElsnatkksplCVFAVHLVELTRRASAMLIVHDAfrtktsdqnsirelaDSDLIINAFRHyqdrndditvqpltavssfTSIHEDIFEIAEDKVVALILIpfhkqptadgelqgenHQIREVNNnllakapcsigilvdrgigsAVITSaqsslhgrqglKLCMLFIGGPDDREALFYAWRmagkpgvnlTVVRYVynkdgesgilvedlnntededLVDTARDVKEKELDDEFINEFRFktmydssityndKMVSNVEELVESITTMYGEYELYIigrgdnvkspltmglsgwvdnpelgpvgetlvssnstaHASVLVVQQSSSALFRSESLQVKRkfgrqkwaspilnpdfeafenkkkkyy
mskprnvtfgnytisrpgglEIQVCYPEEFNKYDSPWQRQNPMMRAVPLLATELGFAIVAIRLFIILLKPLHQPRFIPELLTSILIGPSTFGTFESLSPDTIVKQMMKLFPYENTVLLETFSSLGLTFYMFLVGLEMDVSAVKRMEKKSLSIAFAGIVIPFCIGAALHFVPIHEGITRESPNLGALFWAISLTITSFPDLARILSDVKLLHTDIGKTALSSAIVNDLSSWFLLVLVIVAFNHYSKHRHGPALTELGAFLMAMLPIICFILIFWFVLRPCIAWMIKETKKKAGKFSDTHISVILLGVVVCGFIADGCGMHSMAGGFIFGLIIPNGELAINIMERTEEFISGVWLPSFIVVSGLRTNFLELFSKTKLFYLLLTTIVATSAKILSTVLVALCYGMPVRDGVALGGLMNTKGVMALIVLNEGRSLKAIDNILMAAMVFMLLLMTGLVGPIFFLAnkkakrtrkykqrtiqrrnpdtelrILTCIHSVGNLSGIINLLELSNATKKSPLCVFAVHLVELTRRASAMLIVHDafrtktsdqnsirELADSDLIINAFRHYQDRNDDITVQPLTAVSSFTSIHEDIFEIAEDKVVALILIPFHKQPTADGELQGENHQIREVNNNLLAKAPCSIGILVDRGIGSAVITSaqsslhgrqGLKLCMLFIGGPDDREALFYAWRMAGKPGVNLTVVRYVYNKDGesgilvedlnntededLVDTArdvkekelddefinefrfktmydssityndkMVSNVEELVESITTMYGEYELYIIGRGDNVKSPLTMGLSGWVDNPELGPVGETLVSSNSTAHASVLVVQQSSSALFRSESLqvkrkfgrqkwaspilnpdfeafenkkkkyy
MSKPRNVTFGNYTISRPGGLEIQVCYPEEFNKYDSPWQRQNPMMRAVPLLATELGFAIVAIRLFIILLKPLHQPRFIPELLTSILIGPSTFGTFESLSPDTIVKQMMKLFPYENTVLLETFSSLGLTFYMFLVGLEMDVSAVKRMEKKSLSIAFAGIVIPFCIGAALHFVPIHEGITRESPNLGALFWAISLTITSFPDLARILSDVKLLHTDIGKTALSSAIVNDLSSWFLLVLVIVAFNHYSKHRHGPALTELGAFLMAMLPIICFILIFWFVLRPCIAWMIKETKKKAGKFSDTHISVILLGVVVCGFIADGCGMHSMAGGFIFGLIIPNGELAINIMERTEEFISGVWLPSFIVVSGLRTNFLELFSKTKLFYLLLTTIVATSAKILSTVLVALCYGMPVRDGVALGGLMNTKGVMALIVLNEGRSLKAIDNIlmaamvfmlllmTGLVGPIFFLANKKAKRTRKYKQRTIQRRNPDTELRILTCIHSVGNLSGIINLLELSNATKKSPLCVFAVHLVELTRRASAMLIVHDAFRTKTSDQNSIRELADSDLIINAFRHYQDRNDDITVQPLTAVSSFTSIHEDIFEIAEDKVVALILIPFHKQPTADGELQGENHQIREVNNNLLAKAPCSIGILVDRGIGSAVITSAQSSLHGRQGLKLCMLFIGGPDDREALFYAWRMAGKPGVNLTVVRYVYNKDGESGILVEDLNNTEDEDLVDTARDVKEKELDDEFINEFRFKTMYDSSITYNDKMVSNVEELVESITTMYGEYELYIIGRGDNVKSPLTMGLSGWVDNPELGPVGETLVSSNSTAHasvlvvqqsssalFRSESLQVKRKFGRQKWASPILNPDFEAFENKKKKYY
******VTFGNYTISRPGGLEIQVCYPEEFNKYDSPWQRQNPMMRAVPLLATELGFAIVAIRLFIILLKPLHQPRFIPELLTSILIGPSTFGTFESLSPDTIVKQMMKLFPYENTVLLETFSSLGLTFYMFLVGLEMDVSAVKRMEKKSLSIAFAGIVIPFCIGAALHFVPIHEGITRESPNLGALFWAISLTITSFPDLARILSDVKLLHTDIGKTALSSAIVNDLSSWFLLVLVIVAFNHYSKHRHGPALTELGAFLMAMLPIICFILIFWFVLRPCIAWMIKETKKKAGKFSDTHISVILLGVVVCGFIADGCGMHSMAGGFIFGLIIPNGELAINIMERTEEFISGVWLPSFIVVSGLRTNFLELFSKTKLFYLLLTTIVATSAKILSTVLVALCYGMPVRDGVALGGLMNTKGVMALIVLNEGRSLKAIDNILMAAMVFMLLLMTGLVGPIFFLANKKAKR**************DTELRILTCIHSVGNLSGIINLLELSNATKKSPLCVFAVHLVELTRRASAMLIVHDAFRTKTSDQNSIRELADSDLIINAFRHYQDRNDDITVQPLTAVSSFTSIHEDIFEIAEDKVVALILIPFHKQP**********HQIREVNNNLLAKAPCSIGILVDRGIGSAVITSAQSSLHGRQGLKLCMLFIGGPDDREALFYAWRMAGKPGVNLTVVRYVYNKDGESGILVEDLN*****************ELDDEFINEFRFKTMYDSSITYNDKMVSNVEELVESITTMYGEYELYIIGRGDNVKSPLTMGLSGWVDNPELGPVGETL**********VLVV***********************W********************
*********GNYTISRPGGLEIQVCYPEEFNKYDSPWQRQNPMMRAVPLLATELGFAIVAIRLFIILLKPLHQPRFIPELLTSILIGPSTFGTFESLSPDTIVKQMMKLFPYENTVLLETFSSLGLTFYMFLVGLEMDVSAVKRMEKKSLSIAFAGIVIPFCIGAALHFVPIHEGITRESPNLGALFWAISLTITSFPDLARILSDVKLLHTDIGKTALSSAIVNDLSSWFLLVLVIVAFNHYSKHRHGPALTELGAFLMAMLPIICFILIFWFVLRPCIAWMIKETKKKAGKFSDTHISVILLGVVVCGFIADGCGMHSMAGGFIFGLIIPNGELAINIMERTEEFISGVWLPSFIVVSGLRTNFLELFSKTKLFYLLLTTIVATSAKILSTVLVALCYGMPVRDGVALGGLMNTKGVMALIVLNEGRSLKAIDNILMAAMVFMLLLMTGLVGPIFFLANKKA*********************ILTCIHSVGNLSGIINLLELSNATKKSPLCVFAVHLVELTRRASAML***********************LIINAFRHYQDRNDDITVQPLTAVSSFTSIHEDIFEIAEDKVVALILIPF****************IREVNNNLLAKAPCSIGILVDRGIG**************QGLKLCMLFIGGPDDREALFYAWRMAGKPGVNLTVVRYVY*******************************ELDDEFINEFRFKTMYDSSITYNDKMVSNVEELVESITTMYGEYELYIIGRG****************NPELGPVGETLVSSNSTAHASVLVVQ*******************************************
MSKPRNVTFGNYTISRPGGLEIQVCYPEEFNKYDSPWQRQNPMMRAVPLLATELGFAIVAIRLFIILLKPLHQPRFIPELLTSILIGPSTFGTFESLSPDTIVKQMMKLFPYENTVLLETFSSLGLTFYMFLVGLEMDVSAVKRMEKKSLSIAFAGIVIPFCIGAALHFVPIHEGITRESPNLGALFWAISLTITSFPDLARILSDVKLLHTDIGKTALSSAIVNDLSSWFLLVLVIVAFNHYSKHRHGPALTELGAFLMAMLPIICFILIFWFVLRPCIAWMIKETKKKAGKFSDTHISVILLGVVVCGFIADGCGMHSMAGGFIFGLIIPNGELAINIMERTEEFISGVWLPSFIVVSGLRTNFLELFSKTKLFYLLLTTIVATSAKILSTVLVALCYGMPVRDGVALGGLMNTKGVMALIVLNEGRSLKAIDNILMAAMVFMLLLMTGLVGPIFFLANKK**********TIQRRNPDTELRILTCIHSVGNLSGIINLLELSNATKKSPLCVFAVHLVELTRRASAMLIVHDAFRTKTSDQNSIRELADSDLIINAFRHYQDRNDDITVQPLTAVSSFTSIHEDIFEIAEDKVVALILIPFHKQPTADGELQGENHQIREVNNNLLAKAPCSIGILVDRGIGSAVITSAQSSLHGRQGLKLCMLFIGGPDDREALFYAWRMAGKPGVNLTVVRYVYNKDGESGILVEDLNNTEDEDLVDTARDVKEKELDDEFINEFRFKTMYDSSITYNDKMVSNVEELVESITTMYGEYELYIIGRGDNVKSPLTMGLSGWVDNPELGPVGETLVSSNSTAHASVLVVQQSSSALFRSESLQVKRKFGRQKWASPILNPDFEAF********
*****NVTF**YTISRPGGLEIQVCYPEEFNKYDSPWQRQNPMMRAVPLLATELGFAIVAIRLFIILLKPLHQPRFIPELLTSILIGPSTFGTFESLSPDTIVKQMMKLFPYENTVLLETFSSLGLTFYMFLVGLEMDVSAVKRMEKKSLSIAFAGIVIPFCIGAALHFVPIHEGITRESPNLGALFWAISLTITSFPDLARILSDVKLLHTDIGKTALSSAIVNDLSSWFLLVLVIVAFNHYSKHRHGPALTELGAFLMAMLPIICFILIFWFVLRPCIAWMIKETKKKAGKFSDTHISVILLGVVVCGFIADGCGMHSMAGGFIFGLIIPNGELAINIMERTEEFISGVWLPSFIVVSGLRTNFLELFSKTKLFYLLLTTIVATSAKILSTVLVALCYGMPVRDGVALGGLMNTKGVMALIVLNEGRSLKAIDNILMAAMVFMLLLMTGLVGPIFFLANKKAKRTRKYKQRTIQRRNPDTELRILTCIHSVGNLSGIINLLELSNATKKSPLCVFAVHLVELTRRASAMLIVHDA**************ADSDLIINAFRHYQDRNDDITVQPLTAVSSFTSIHEDIFEIAEDKVVALILIPFHKQPTADGELQGENHQIREVNNNLLAKAPCSIGILVDRGIGS***********GRQGLKLCMLFIGGPDDREALFYAWRMAGKPGVNLTVVRYVYNK***********************RDVKEKELDDEFINEFRFKTMYDSSITYNDKMVSNVEELVESITTMYGEYELYIIGRGDNVKSPLTMGLSGWVDNPELGPVGETLVSSNSTAHASVLVVQQSSSA************************PDFE**********
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MSKPRNVTFGNYTISRPGGLEIQVCYPEEFNKYDSPWQRQNPMMRAVPLLATELGFAIVAIRLFIILLKPLHQPRFIPELLTSILIGPSTFGTFESLSPDTIVKQMMKLFPYENTVLLETFSSLGLTFYMFLVGLEMDVSAVKRMEKKSLSIAFAGIVIPFCIGAALHFVPIHEGITRESPNLGALFWAISLTITSFPDLARILSDVKLLHTDIGKTALSSAIVNDLSSWFLLVLVIVAFNHYSKHRHGPALTELGAFLMAMLPIICFILIFWFVLRPCIAWMIKETKKKAGKFSDTHISVILLGVVVCGFIADGCGMHSMAGGFIFGLIIPNGELAINIMERTEEFISGVWLPSFIVVSGLRTNFLELFSKTKLFYLLLTTIVATSAKILSTVLVALCYGMPVRDGVALGGLMNTKGVMALIVLNEGRSLKAIDNILMAAMVFMLLLMTGLVGPIFFLANKKAKRTRKYKQRTIQRRNPDTELRILTCIHSVGNLSGIINLLELSNATKKSPLCVFAVHLVELTRRASAMLIVHDAFRTKTSDQNSIRELADSDLIINAFRHYQDRNDDITVQPLTAVSSFTSIHEDIFEIAEDKVVALILIPFHKQPTADGELQGENHQIREVNNNLLAKAPCSIGILVDRGIGSAVITSAQSSLHGRQGLKLCMLFIGGPDDREALFYAWRMAGKPGVNLTVVRYVYNKDGESGILVEDLNNTEDEDLVDTARDVKEKELDDEFINEFRFKTMYDSSITYNDKMVSNVEELVESITTMYGEYELYIIGRGDNVKSPLTMGLSGWVDNPELGPVGETLVSSNSTAHASVLVVQQSSSALFRSESLQVKRKFGRQKWASPILNPDFEAFENKKKKYY
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query868 2.2.26 [Sep-21-2011]
Q9SIT5821 Cation/H(+) antiporter 15 yes no 0.887 0.937 0.430 0.0
Q8VYD4867 Cation/H(+) antiporter 23 no no 0.903 0.904 0.414 1e-175
Q9SKA9832 Cation/H(+) antiporter 21 no no 0.915 0.955 0.388 1e-158
Q9FFR9810 Cation/H(+) antiporter 18 no no 0.870 0.933 0.378 1e-134
Q9LUN4800 Cation/H(+) antiporter 19 no no 0.854 0.927 0.365 1e-122
Q9SUQ7820 Cation/H(+) antiporter 17 no no 0.860 0.910 0.358 1e-121
Q9M353842 Cation/H(+) antiporter 20 no no 0.892 0.920 0.345 1e-111
Q1HDT3811 Cation/H(+) antiporter 16 no no 0.849 0.908 0.325 1e-102
Q9LMJ1829 Cation/H(+) antiporter 14 no no 0.914 0.957 0.284 8e-90
O22920831 Cation/H(+) symporter 13 no no 0.873 0.912 0.296 7e-89
>sp|Q9SIT5|CHX15_ARATH Cation/H(+) antiporter 15 OS=Arabidopsis thaliana GN=CHX15 PE=2 SV=1 Back     alignment and function desciption
 Score =  648 bits (1671), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 348/808 (43%), Positives = 513/808 (63%), Gaps = 38/808 (4%)

Query: 24  VCYPEEFNKYDSPWQRQNPMMRAVPLLATELGFAIVAIRLFIILLKPLHQPRFIPELLTS 83
           +CY       +  WQ  NP+  ++PL   +L   +V  R F+ +LKP  QPR I E+L  
Sbjct: 14  ICYAPSMITTNGVWQGDNPLDFSLPLFVLQLTLVVVVTRFFVFILKPFRQPRVISEILGG 73

Query: 84  ILIGPSTFGTFESLSPDTIVKQMMKLFPYENTVLLETFSSLGLTFYMFLVGLEMDVSAVK 143
           I++GPS  G           K    +FP  + ++LET +++GL +++FLVG+EMD+  V+
Sbjct: 74  IVLGPSVLGRS--------TKFAHTIFPQRSVMVLETMANVGLLYFLFLVGVEMDIMVVR 125

Query: 144 RMEKKSLSIAFAGIVIPFCIGAALHFVPIHEGITRESPNLGA----LFWAISLTITSFPD 199
           +  K++L+IA  G+V+PF IGAA  F      + R   +LG     LF  ++L++T+FP 
Sbjct: 126 KTGKRALTIAIGGMVLPFLIGAAFSF-----SMHRSEDHLGQGTYILFLGVALSVTAFPV 180

Query: 200 LARILSDVKLLHTDIGKTALSSAIVNDLSSWFLLVLVIVAFNHYSKHRHGPALTELGAFL 259
           LARIL+++KL++T+IG+ ++S+A+VND+ +W LL L I                   A L
Sbjct: 181 LARILAELKLINTEIGRISMSAALVNDMFAWILLALAIALAESDKTSF---------ASL 231

Query: 260 MAMLPIICFILIFWFVLRPCIAWMIKETKKKAGKFSDTHISVILLGVVVCGFIADGCGMH 319
             M+    FI +  FV+RP IAW+I++T +    FS+ HI +IL GV++ GFI D  G H
Sbjct: 232 WVMISSAVFIAVCVFVVRPGIAWIIRKTPE-GENFSEFHICLILTGVMISGFITDAIGTH 290

Query: 320 SMAGGFIFGLIIPNGELAINIMERTEEFISGVWLPSFIVVSGLRTNFLELFSKTKLFYLL 379
           S+ G F+FGL+IPNG L + ++E+ E+F+SG+ LP F  +SGL+TN   +        L 
Sbjct: 291 SVFGAFVFGLVIPNGPLGLTLIEKLEDFVSGLLLPLFFAISGLKTNIAAIQGPATWLTLF 350

Query: 380 LTTIVATSAKILSTVLVALCYGMPVRDGVALGGLMNTKGVMALIVLNEGRSLKAIDNILM 439
           L   +A + K++ TV+VA  +GMPVR+G+ LG L+NTKG++ +IVLN G+  K +D+   
Sbjct: 351 LVIFLACAGKVIGTVIVAFFHGMPVREGITLGLLLNTKGLVEMIVLNVGKDQKVLDDETF 410

Query: 440 AAMVFMLLLMTGLVGPIFFLANKKAKRTRKYKQRTIQRRNPDTELRILTCIHSVGNLSGI 499
           A MV + L+MTG++ PI  +  K  K++  YK+RTIQ+  PD+ELR+L C+H+  N+  I
Sbjct: 411 ATMVLVALVMTGVITPIVTILYKPVKKSVSYKRRTIQQTKPDSELRVLVCVHTPRNVPTI 470

Query: 500 INLLELSNATKKSPLCVFAVHLVELTRRASAMLIVHDAFRTKTSDQNSIRELADSDLIIN 559
           INLLE S+ TK+SP+C++ +HLVELT RASAMLIVH+  ++     N  R  A SD IIN
Sbjct: 471 INLLEASHPTKRSPICIYVLHLVELTGRASAMLIVHNTRKSGRPALN--RTQAQSDHIIN 528

Query: 560 AFRHYQDRNDDITVQPLTAVSSFTSIHEDIFEIAEDKVVALILIPFHKQPTADGELQGEN 619
           AF +Y+     + VQPLTA+S ++++HED+  +AEDK V+ I+IPFHKQ T DG ++  N
Sbjct: 529 AFENYEQHAAFVAVQPLTAISPYSTMHEDVCSLAEDKRVSFIIIPFHKQQTVDGGMESTN 588

Query: 620 HQIREVNNNLLAKAPCSIGILVDRGIGSAVITSAQSSLHGRQGLKLCMLFIGGPDDREAL 679
              R VN NLL  +PCS+GILVDRG+  A   ++ +       L++ +LF GGPDDREAL
Sbjct: 589 PAYRLVNQNLLENSPCSVGILVDRGLNGATRLNSNTV-----SLQVAVLFFGGPDDREAL 643

Query: 680 FYAWRMAGKPGVNLTVVRYVYNKDGESGILVEDLNNTEDEDLVDTARD-VKEKELDDEFI 738
            YAWRMA  PG+ LTV+R+++++D            T D DL     D  K+++LDD++I
Sbjct: 644 AYAWRMAQHPGITLTVLRFIHDEDEAD---TASTRATNDSDLKIPKMDHRKQRQLDDDYI 700

Query: 739 NEFRFKTMYDSSITYNDKMVSNVEELVESITTMYGEYELYIIGRGDNVKSPLTMGLSGWV 798
           N FR +     SI Y +K+VSN EE V ++ +M   ++L+I+GRG+ + SPLT GL+ W 
Sbjct: 701 NLFRAENAEYESIVYIEKLVSNGEETVAAVRSMDSSHDLFIVGRGEGMSSPLTAGLTDWS 760

Query: 799 DNPELGPVGETLVSSNSTAHASVLVVQQ 826
           + PELG +G+ L SS+  A  SVLVVQQ
Sbjct: 761 ECPELGAIGDLLASSDFAATVSVLVVQQ 788
May operate as a cation/H(+) antiporter.
Arabidopsis thaliana (taxid: 3702)
>sp|Q8VYD4|CHX23_ARATH Cation/H(+) antiporter 23, chloroplastic OS=Arabidopsis thaliana GN=CHX23 PE=1 SV=1 Back     alignment and function description
>sp|Q9SKA9|CHX21_ARATH Cation/H(+) antiporter 21 OS=Arabidopsis thaliana GN=CHX21 PE=2 SV=2 Back     alignment and function description
>sp|Q9FFR9|CHX18_ARATH Cation/H(+) antiporter 18 OS=Arabidopsis thaliana GN=CHX18 PE=2 SV=1 Back     alignment and function description
>sp|Q9LUN4|CHX19_ARATH Cation/H(+) antiporter 19 OS=Arabidopsis thaliana GN=CHX19 PE=2 SV=1 Back     alignment and function description
>sp|Q9SUQ7|CHX17_ARATH Cation/H(+) antiporter 17 OS=Arabidopsis thaliana GN=CHX17 PE=1 SV=1 Back     alignment and function description
>sp|Q9M353|CHX20_ARATH Cation/H(+) antiporter 20 OS=Arabidopsis thaliana GN=CHX20 PE=2 SV=1 Back     alignment and function description
>sp|Q1HDT3|CHX16_ARATH Cation/H(+) antiporter 16 OS=Arabidopsis thaliana GN=CHX16 PE=2 SV=1 Back     alignment and function description
>sp|Q9LMJ1|CHX14_ARATH Cation/H(+) antiporter 14 OS=Arabidopsis thaliana GN=CHX14 PE=2 SV=1 Back     alignment and function description
>sp|O22920|CHX13_ARATH Cation/H(+) symporter 13 OS=Arabidopsis thaliana GN=CHX13 PE=1 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query868
255552535833 monovalent cation:proton antiporter, put 0.926 0.965 0.429 0.0
359477011837 PREDICTED: cation/H(+) antiporter 15-lik 0.892 0.925 0.431 0.0
224109328783 cation proton exchanger [Populus trichoc 0.857 0.950 0.463 0.0
147785381837 hypothetical protein VITISV_011183 [Viti 0.892 0.925 0.429 0.0
255550512834 Na(+)/H(+) antiporter, putative [Ricinus 0.903 0.940 0.430 0.0
296088536820 unnamed protein product [Vitis vinifera] 0.874 0.925 0.426 0.0
449459268837 PREDICTED: cation/H(+) antiporter 15-lik 0.906 0.940 0.417 0.0
224096008769 cation proton exchanger [Populus trichoc 0.876 0.989 0.435 0.0
15225447821 cation/H(+) antiporter 15 [Arabidopsis t 0.887 0.937 0.430 0.0
297831844823 hypothetical protein ARALYDRAFT_480314 [ 0.889 0.938 0.429 0.0
>gi|255552535|ref|XP_002517311.1| monovalent cation:proton antiporter, putative [Ricinus communis] gi|223543574|gb|EEF45104.1| monovalent cation:proton antiporter, putative [Ricinus communis] Back     alignment and taxonomy information
 Score =  671 bits (1730), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 369/860 (42%), Positives = 520/860 (60%), Gaps = 56/860 (6%)

Query: 5   RNVTFGNYTISRPGGLEIQVCYPEEFNKYDSPWQRQNPMMRAVPLLATELGFAIVAIRLF 64
           + +T G Y + R     I +CY E      + W+ +N ++ ++P    +L   ++ IRL 
Sbjct: 17  KGLTDGEYIVRRGPQSSITMCYFENITNDQAFWKSENSLLTSLPYFIIQLTLMMLCIRLV 76

Query: 65  IILLKPLHQPRFIPELLTSILIGPSTFGTFESLSPDTIVKQMMKLFPYENTVLLETFSSL 124
             +LKPL QPRF+ ELL+++LI PS        S   I      + P ++T  L+T   L
Sbjct: 77  FGILKPLRQPRFLAELLSAVLIVPS--------STANIAFFQKYISPAKSTRTLDTMGQL 128

Query: 125 GLTFYMFLVGLEMDVSAVKRMEKKSLSIAFAGIVIPFCIGAALHFVPIHEGITRESPNLG 184
           GL +YMFLVGLEMD++ +K +EKK+L  A   I+ P  +G  L F+  H     +   +G
Sbjct: 129 GLVYYMFLVGLEMDLTLLKHIEKKALYNAVVTILFPLGMGIGLFFLLDHYR-DEKVVGMG 187

Query: 185 ALFWAISLTITSFPDLARILSDVKLLHTDIGKTALSSAIVNDLSSWFLLVLVIVAFNHYS 244
              WA++LT+TSFPDLAR+LSD+KLLHTDIG+ ALSSA+V DL +W LLVL I   N + 
Sbjct: 188 GAIWALTLTVTSFPDLARVLSDMKLLHTDIGRLALSSAVVCDLVAWALLVLAITMVNQH- 246

Query: 245 KHRHGPALTELGAFLMAMLPIICFILIFWFVLRPCIAWMIK-ETKKKAGKFSDTHISVIL 303
                        + + +  ++ F+L  WFV+RP ++W+I+       G   +  I  IL
Sbjct: 247 ------------FYFLNVFVMVGFVLFCWFVVRPALSWIIRLNNSSNGGMDHELLIYFIL 294

Query: 304 LGVVVCGFIADGCGMHSMAGGFIFGLIIPNGELAINIMERTEEFISGVWLPSFIVVSGLR 363
            GVV+ GF+ D CG  SM G F+FGLIIP GEL I ++E+ E+ ++G+ LP+F   +GL+
Sbjct: 295 GGVVIFGFVTDACGSRSMVGAFMFGLIIPKGELGIRLIEKLEDLVTGILLPAFYWTNGLK 354

Query: 364 TNFLELFSKTKLFYLLLTTIVATSAKILSTVLVALCYGMPVRDGVALGGLMNTKGVMALI 423
            +F  L  +  +  + +  ++A + KI+S  + ++  GM  R+G+ LG LMNTKGV+ALI
Sbjct: 355 IHFHTLNDRVNIIVVPIIIVLACTTKIISAFIFSIVQGMSAREGITLGVLMNTKGVLALI 414

Query: 424 VLNEGRSLKAIDNILMAAMVFMLLLMTGLVGPIFFLANKKAKRTRKYKQRTIQRRNPDTE 483
           ++N GR LK  D  + A M   L+LMT +V PI     K  K+ ++YK+RTI+    + E
Sbjct: 415 IMNVGRDLKGFDEQMYAMMTMSLILMTLMVKPIAMATTKSTKQVKQYKRRTIEMSKHNAE 474

Query: 484 LRILTCIHSVGNLSGIINLLELSNATKKSPLCVFAVHLVELT-RRASAMLIVHDAF-RT- 540
           LRIL C +SV N+SGIINLLE SN TK+SP+CVFAVHLV+LT RR SAMLIVHDA+ RT 
Sbjct: 475 LRILACTYSVNNISGIINLLEASNPTKQSPICVFAVHLVQLTARRVSAMLIVHDAYHRTP 534

Query: 541 KTSDQNSIRELADSDLIINAFRHYQDRNDDITVQPLTAVSSFTSIHEDIFEIAEDKVVAL 600
               +N   E+ +S+ +INAF+ Y+ R+ +++VQ LT VS +TS+ ED+  +AEDK V L
Sbjct: 535 NIGQENQSHEVEESEHVINAFQEYESRSTEVSVQALTVVSPYTSMQEDVCRLAEDKRVNL 594

Query: 601 ILIPFHKQPTADGELQG-ENHQIREVNNNLLAKAPCSIGILVDRGIGSAVITSAQSSLHG 659
           IL+PFHKQP   G++Q  E+  +R VN NLL+ +PCSIGIL+DRG+G +          G
Sbjct: 595 ILVPFHKQPDVYGKMQDEEDAPLRAVNQNLLSTSPCSIGILIDRGLGES---------QG 645

Query: 660 RQGLKLCMLFIGGPDDREALFYAWRMAGKPGVNLTVVRYVYNKDGESGILVEDLNNTEDE 719
           +      MLF+GG D REAL YAWRMAG   VNLTVVR+V             L  T ++
Sbjct: 646 QN--NFIMLFVGGADSREALAYAWRMAGSASVNLTVVRFV-------------LTTTTND 690

Query: 720 DLVDTARDVKEKELDDEFINEFRFKTMYDSSITYNDKMVSNVEELVESITTMYGEYELYI 779
           D        KE+ LDDE IN+FRFKTMYD SIT+ + + S   E++ ++  M   Y+LYI
Sbjct: 691 DARVVTEQEKERRLDDECINQFRFKTMYDESITFEEILFSYGNEIITAMRRMQDGYDLYI 750

Query: 780 IGRGDNVKSPLTMGLSGWVDNPELGPVGETLVSSNSTAHASVLVVQQ-----SSSALFRS 834
           +GRG+   S LT GL    D  ELG + +TL+SS+    +S+LV+QQ     +     R+
Sbjct: 751 VGRGEGAMSQLTPGLLELSDCEELGALWDTLLSSDFAGSSSILVIQQHYVRGAKEGGLRA 810

Query: 835 ESLQVKRKFGRQKWASPILN 854
            S     K     W S I N
Sbjct: 811 ASDHKYNKHKHMTWLSHIEN 830

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|359477011|ref|XP_002262677.2| PREDICTED: cation/H(+) antiporter 15-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|224109328|ref|XP_002315160.1| cation proton exchanger [Populus trichocarpa] gi|222864200|gb|EEF01331.1| cation proton exchanger [Populus trichocarpa] Back     alignment and taxonomy information
>gi|147785381|emb|CAN66285.1| hypothetical protein VITISV_011183 [Vitis vinifera] Back     alignment and taxonomy information
>gi|255550512|ref|XP_002516306.1| Na(+)/H(+) antiporter, putative [Ricinus communis] gi|223544536|gb|EEF46053.1| Na(+)/H(+) antiporter, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|296088536|emb|CBI37527.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|449459268|ref|XP_004147368.1| PREDICTED: cation/H(+) antiporter 15-like [Cucumis sativus] gi|449513321|ref|XP_004164295.1| PREDICTED: cation/H(+) antiporter 15-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|224096008|ref|XP_002310518.1| cation proton exchanger [Populus trichocarpa] gi|222853421|gb|EEE90968.1| cation proton exchanger [Populus trichocarpa] Back     alignment and taxonomy information
>gi|15225447|ref|NP_178985.1| cation/H(+) antiporter 15 [Arabidopsis thaliana] gi|75313480|sp|Q9SIT5.1|CHX15_ARATH RecName: Full=Cation/H(+) antiporter 15; AltName: Full=Protein CATION/H+ EXCHANGER 15; Short=AtCHX15 gi|4558666|gb|AAD22684.1| putative Na/H antiporter [Arabidopsis thaliana] gi|61658321|gb|AAX49544.1| cation/H+ exchanger [Arabidopsis thaliana] gi|330251152|gb|AEC06246.1| cation/H(+) antiporter 15 [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|297831844|ref|XP_002883804.1| hypothetical protein ARALYDRAFT_480314 [Arabidopsis lyrata subsp. lyrata] gi|297329644|gb|EFH60063.1| hypothetical protein ARALYDRAFT_480314 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query868
TAIR|locus:2054152821 CHX15 "cation/hydrogen exchang 0.791 0.836 0.441 2.1e-157
TAIR|locus:2031968867 CHX23 "cation/H+ exchanger 23" 0.894 0.895 0.406 7.9e-149
TAIR|locus:2160457810 CHX18 "cation/H+ exchanger 18" 0.845 0.906 0.366 4.7e-119
TAIR|locus:2084370842 CHX20 "cation/H+ exchanger 20" 0.879 0.906 0.341 7.6e-112
TAIR|locus:2128484820 CHX17 "cation/H+ exchanger 17" 0.839 0.889 0.345 5.3e-104
TAIR|locus:2090462800 CHX19 "cation/H+ exchanger 19" 0.707 0.767 0.369 3e-101
TAIR|locus:2024578811 CHX16 "cation/H+ exchanger 16" 0.838 0.897 0.317 6.6e-97
TAIR|locus:2007392829 CHX14 "cation/hydrogen exchang 0.688 0.721 0.289 2.7e-86
TAIR|locus:2171238857 CHX25 "cation/H+ exchanger 25" 0.884 0.896 0.279 3.4e-77
TAIR|locus:2082142817 CHX4 "cation/H+ exchanger 4" [ 0.747 0.794 0.273 1.6e-75
TAIR|locus:2054152 CHX15 "cation/hydrogen exchanger 15" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1534 (545.1 bits), Expect = 2.1e-157, P = 2.1e-157
 Identities = 314/711 (44%), Positives = 465/711 (65%)

Query:   109 LFPYENTVLLETFSSLGLTFYMFLVGLEMDVSAVKRMEKKSLSIAFAGIVIPFCIGAALH 168
             +FP  + ++LET +++GL +++FLVG+EMD+  V++  K++L+IA  G+V+PF IGAA  
Sbjct:    91 IFPQRSVMVLETMANVGLLYFLFLVGVEMDIMVVRKTGKRALTIAIGGMVLPFLIGAAFS 150

Query:   169 FVPIHEGITRESPNLGALFWAISLTITSFPDLARILSDVKLLHTDIGKTALSSAIVNDLS 228
             F  +H            LF  ++L++T+FP LARIL+++KL++T+IG+ ++S+A+VND+ 
Sbjct:   151 F-SMHRSEDHLGQGTYILFLGVALSVTAFPVLARILAELKLINTEIGRISMSAALVNDMF 209

Query:   229 SWFLLVLVIVAFNHYSKHRHGPALTELGAFLMAMLPIICFILIFWFVLRPCIAWMIKETK 288
             +W LL L I A     K       T   A L  M+    FI +  FV+RP IAW+I++T 
Sbjct:   210 AWILLALAI-ALAESDK-------TSF-ASLWVMISSAVFIAVCVFVVRPGIAWIIRKTP 260

Query:   289 KKAGKFSDTHISVILLGVVVCGFIADGCGMHSMAGGFIFGLIIPNGELAINIMERTEEFI 348
             +    FS+ HI +IL GV++ GFI D  G HS+ G F+FGL+IPNG L + ++E+ E+F+
Sbjct:   261 E-GENFSEFHICLILTGVMISGFITDAIGTHSVFGAFVFGLVIPNGPLGLTLIEKLEDFV 319

Query:   349 SGVWLPSFIVVSGLRTNFLELFSKTKLFYLLLTTIVATSAKILSTVLVALCYGMPVRDGV 408
             SG+ LP F  +SGL+TN   +        L L   +A + K++ TV+VA  +GMPVR+G+
Sbjct:   320 SGLLLPLFFAISGLKTNIAAIQGPATWLTLFLVIFLACAGKVIGTVIVAFFHGMPVREGI 379

Query:   409 ALGGLMNTKGVMALIVLNEGRSLKAIDNIXXXXXXXXXXXXTGLVGPIFFLANKKAKRTR 468
              LG L+NTKG++ +IVLN G+  K +D+             TG++ PI  +  K  K++ 
Sbjct:   380 TLGLLLNTKGLVEMIVLNVGKDQKVLDDETFATMVLVALVMTGVITPIVTILYKPVKKSV 439

Query:   469 KYKQRTIQRRNPDTELRILTCIHSVGNLSGIINLLELSNATKKSPLCVFAVHLVELTRRA 528
              YK+RTIQ+  PD+ELR+L C+H+  N+  IINLLE S+ TK+SP+C++ +HLVELT RA
Sbjct:   440 SYKRRTIQQTKPDSELRVLVCVHTPRNVPTIINLLEASHPTKRSPICIYVLHLVELTGRA 499

Query:   529 SAMLIVHDAFRTKTSDQNSI-RELADSDLIINAFRHYQDRNDDITVQPLTAVSSFTSIHE 587
             SAMLIVH+   T+ S + ++ R  A SD IINAF +Y+     + VQPLTA+S ++++HE
Sbjct:   500 SAMLIVHN---TRKSGRPALNRTQAQSDHIINAFENYEQHAAFVAVQPLTAISPYSTMHE 556

Query:   588 DIFEIAEDKVVALILIPFHKQPTADGELQGENHQIREVNNNLLAKAPCSIGILVDRGIGS 647
             D+  +AEDK V+ I+IPFHKQ T DG ++  N   R VN NLL  +PCS+GILVDRG+  
Sbjct:   557 DVCSLAEDKRVSFIIIPFHKQQTVDGGMESTNPAYRLVNQNLLENSPCSVGILVDRGLNG 616

Query:   648 AVITSAQSSLHGRQGLKLCMLFIGGPDDREALFYAWRMAGKPGVNLTVVRYVYNKDGESG 707
             A  T   S+      L++ +LF GGPDDREAL YAWRMA  PG+ LTV+R+++++D E+ 
Sbjct:   617 A--TRLNSNT---VSLQVAVLFFGGPDDREALAYAWRMAQHPGITLTVLRFIHDED-EAD 670

Query:   708 ILVEDLNNTEDEDLVDTARDV-KEKELDDEFINEFRFKTMYDSSITYNDKMVSNVEELVE 766
                     T D DL     D  K+++LDD++IN FR +     SI Y +K+VSN EE V 
Sbjct:   671 --TASTRATNDSDLKIPKMDHRKQRQLDDDYINLFRAENAEYESIVYIEKLVSNGEETVA 728

Query:   767 SITTMYGEYELYIIGRGDNVKSPLTMGLSGWVDNPELGPVGETLVSSNSTA 817
             ++ +M   ++L+I+GRG+ + SPLT GL+ W + PELG +G+ L SS+  A
Sbjct:   729 AVRSMDSSHDLFIVGRGEGMSSPLTAGLTDWSECPELGAIGDLLASSDFAA 779
GO:0006812 "cation transport" evidence=IEA;IC
GO:0009507 "chloroplast" evidence=ISM
GO:0015299 "solute:hydrogen antiporter activity" evidence=IEA
GO:0015385 "sodium:hydrogen antiporter activity" evidence=ISS
GO:0016021 "integral to membrane" evidence=IEA
GO:0035725 "sodium ion transmembrane transport" evidence=ISS
GO:0055085 "transmembrane transport" evidence=IEA
GO:0005451 "monovalent cation:hydrogen antiporter activity" evidence=NAS
GO:0006885 "regulation of pH" evidence=IMP
GO:0009827 "plant-type cell wall modification" evidence=RCA
GO:0009860 "pollen tube growth" evidence=RCA
TAIR|locus:2031968 CHX23 "cation/H+ exchanger 23" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2160457 CHX18 "cation/H+ exchanger 18" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2084370 CHX20 "cation/H+ exchanger 20" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2128484 CHX17 "cation/H+ exchanger 17" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2090462 CHX19 "cation/H+ exchanger 19" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2024578 CHX16 "cation/H+ exchanger 16" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2007392 CHX14 "cation/hydrogen exchanger 14" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2171238 CHX25 "cation/H+ exchanger 25" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2082142 CHX4 "cation/H+ exchanger 4" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q9SIT5CHX15_ARATHNo assigned EC number0.43060.88700.9378yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query868
PLN03159832 PLN03159, PLN03159, cation/H(+) antiporter 15; Pro 0.0
pfam00999370 pfam00999, Na_H_Exchanger, Sodium/hydrogen exchang 7e-52
COG0475397 COG0475, KefB, Kef-type K+ transport systems, memb 8e-41
TIGR00932273 TIGR00932, 2a37, transporter, monovalent cation:pr 2e-26
COG4651408 COG4651, RosB, Kef-type K+ transport system, predi 4e-07
COG0025429 COG0025, NhaP, NhaP-type Na+/H+ and K+/H+ antiport 1e-05
>gnl|CDD|215608 PLN03159, PLN03159, cation/H(+) antiporter 15; Provisional Back     alignment and domain information 
 Score =  737 bits (1903), Expect = 0.0
 Identities = 351/820 (42%), Positives = 519/820 (63%), Gaps = 44/820 (5%)

Query: 16  RPGGLEIQVCYPEEFNKYDSPWQRQNPMMRAVPLLATELGFAIVAIRLFIILLKPLHQPR 75
            P      VCY       +  WQ  NP+  ++PL   +L   +V  RL + +LKP  QPR
Sbjct: 10  NPSTASSVVCYAPMMITTNGIWQGDNPLDFSLPLFILQLTLVVVTTRLLVFILKPFRQPR 69

Query: 76  FIPELLTSILIGPSTFGTFESLSPDTIVKQMMKLFPYENTVLLETFSSLGLTFYMFLVGL 135
            I E+L  +++GPS  G  E  +          +FP  + ++LET ++LGL +++FLVG+
Sbjct: 70  VISEILGGVILGPSVLGQSEVFA--------NTIFPLRSVMVLETMANLGLLYFLFLVGV 121

Query: 136 EMDVSAVKRMEKKSLSIAFAGIVIPFCIGAALHFVPIHEGITRESPNLGA----LFWAIS 191
           EMD+S ++R  KK+L+IA AG+ +PFCIG A  F+  H    + S N+      LF  ++
Sbjct: 122 EMDISVIRRTGKKALAIAIAGMALPFCIGLAFSFI-FH----QVSRNVHQGTFILFLGVA 176

Query: 192 LTITSFPDLARILSDVKLLHTDIGKTALSSAIVNDLSSWFLLVLVIVAFNHYSKHRHGPA 251
           L++T+FP LARIL+++KL++T++G+ A+S+A+VND+ +W LL L I             A
Sbjct: 177 LSVTAFPVLARILAEIKLINTELGRIAMSAALVNDMCAWILLALAI-------------A 223

Query: 252 LTELG----AFLMAMLPIICFILIFWFVLRPCIAWMIKETKKKAGKFSDTHISVILLGVV 307
           L E      A L  +L  + F+L  ++V+RP I W+I+ T +    FS+ +I +IL GV+
Sbjct: 224 LAENDSTSLASLWVLLSSVAFVLFCFYVVRPGIWWIIRRTPEGET-FSEFYICLILTGVM 282

Query: 308 VCGFIADGCGMHSMAGGFIFGLIIPNGELAINIMERTEEFISGVWLPSFIVVSGLRTNFL 367
           + GFI D  G HS+ G F+FGL+IPNG L + ++E+ E+F+SG+ LP F  +SGL+TN  
Sbjct: 283 ISGFITDAIGTHSVFGAFVFGLVIPNGPLGVTLIEKLEDFVSGLLLPLFFAISGLKTNVT 342

Query: 368 ELFSKTKLFYLLLTTIVATSAKILSTVLVALCYGMPVRDGVALGGLMNTKGVMALIVLNE 427
           ++        L+L  I+A++ KI+ T+++A  Y MP R+G+ LG LMNTKG++ +IVLN 
Sbjct: 343 KIQGPATWGLLVLVIIMASAGKIMGTIIIAFFYTMPFREGITLGFLMNTKGLVEMIVLNV 402

Query: 428 GRSLKAIDNILMAAMVFMLLLMTGLVGPIFFLANKKAKRTRKYKQRTIQRRNPDTELRIL 487
           GR  + +D+   A MV + + MT L+ P+  +  + A+R   YK+RTIQR   D ELR+L
Sbjct: 403 GRDQEVLDDESFAVMVLVAVAMTALITPVVTVVYRPARRLVGYKRRTIQRSKHDAELRML 462

Query: 488 TCIHSVGNLSGIINLLELSNATKKSPLCVFAVHLVELTRRASAMLIVHDAFRTKTSDQNS 547
            C+H+  N+  IINLLE S+ TK+SP+C++ +HLVELT RASAMLIVH+  ++     N 
Sbjct: 463 VCVHTPRNVPTIINLLEASHPTKRSPICIYVLHLVELTGRASAMLIVHNTRKSGRPALNR 522

Query: 548 IRELADSDLIINAFRHYQDRNDDITVQPLTAVSSFTSIHEDIFEIAEDKVVALILIPFHK 607
            +  A SD IINAF +Y+     ++VQPLTA+S ++++HED+  +AEDK V+LI+IPFHK
Sbjct: 523 TQ--AQSDHIINAFENYEQHAGCVSVQPLTAISPYSTMHEDVCNLAEDKRVSLIIIPFHK 580

Query: 608 QPTADGELQGENHQIREVNNNLLAKAPCSIGILVDRGI-GSAVITSAQSSLHGRQGLKLC 666
           Q T DG ++  N   R VN N+LA APCS+GILVDRG+ G+  + S Q S H      + 
Sbjct: 581 QQTVDGGMEATNPAFRGVNQNVLANAPCSVGILVDRGLSGATRLASNQVSHH------VA 634

Query: 667 MLFIGGPDDREALFYAWRMAGKPGVNLTVVRYVYNKDGESGILVEDLNNTEDEDLVDTAR 726
           +LF GGPDDREAL YAWRM+  PG+ LTV+R++  +D          + ++         
Sbjct: 635 VLFFGGPDDREALAYAWRMSEHPGITLTVMRFIPGEDAAPTASQPASSPSDPRIPTVETD 694

Query: 727 DVKEKELDDEFINEFRFKTMYDSSITYNDKMVSNVEELVESITTMYGEYELYIIGRGDNV 786
             KE++LD+E+INEFR +   + SI Y +K+VSN EE V +I +M   ++L+I+GRG  +
Sbjct: 695 GKKERQLDEEYINEFRARNAGNESIVYTEKVVSNGEETVAAIRSMDSAHDLFIVGRGQGM 754

Query: 787 KSPLTMGLSGWVDNPELGPVGETLVSSNSTAHASVLVVQQ 826
            SPLT GL+ W + PELG +G+ L SS+  A  SVLVVQQ
Sbjct: 755 ISPLTAGLTDWSECPELGAIGDLLASSDFAATVSVLVVQQ 794

Length = 832
>gnl|CDD|216235 pfam00999, Na_H_Exchanger, Sodium/hydrogen exchanger family Back     alignment and domain information
>gnl|CDD|223551 COG0475, KefB, Kef-type K+ transport systems, membrane components [Inorganic ion transport and metabolism] Back     alignment and domain information
>gnl|CDD|233195 TIGR00932, 2a37, transporter, monovalent cation:proton antiporter-2 (CPA2) family Back     alignment and domain information
>gnl|CDD|226998 COG4651, RosB, Kef-type K+ transport system, predicted NAD-binding component [Inorganic ion transport and metabolism] Back     alignment and domain information
>gnl|CDD|223104 COG0025, NhaP, NhaP-type Na+/H+ and K+/H+ antiporters [Inorganic ion transport and metabolism] Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 868
PLN03159832 cation/H(+) antiporter 15; Provisional 100.0
KOG1650769 consensus Predicted K+/H+-antiporter [Inorganic io 100.0
PRK03562621 glutathione-regulated potassium-efflux system prot 100.0
PRK10669558 putative cation:proton antiport protein; Provision 100.0
PRK03659601 glutathione-regulated potassium-efflux system prot 100.0
COG0475397 KefB Kef-type K+ transport systems, membrane compo 100.0
PRK05326562 potassium/proton antiporter; Reviewed 100.0
COG4651408 RosB Kef-type K+ transport system, predicted NAD-b 100.0
TIGR00932273 2a37 transporter, monovalent cation:proton antipor 100.0
PF00999380 Na_H_Exchanger: Sodium/hydrogen exchanger family; 100.0
TIGR00844810 c_cpa1 na(+)/h(+) antiporter. This model is specif 99.97
TIGR00831525 a_cpa1 Na+/H+ antiporter, bacterial form. This mod 99.97
COG0025429 NhaP NhaP-type Na+/H+ and K+/H+ antiporters [Inorg 99.95
TIGR00840559 b_cpa1 sodium/hydrogen exchanger 3. This model is 99.94
COG3263574 NhaP-type Na+/H+ and K+/H+ antiporters with a uniq 99.93
KOG1965575 consensus Sodium/hydrogen exchanger protein [Inorg 99.77
KOG4505467 consensus Na+/H+ antiporter [Inorganic ion transpo 99.76
PRK14853423 nhaA pH-dependent sodium/proton antiporter; Provis 99.71
PRK11175305 universal stress protein UspE; Provisional 99.69
TIGR00773373 NhaA Na+/H+ antiporter NhaA. These proteins are me 99.45
KOG1966670 consensus Sodium/hydrogen exchanger protein [Inorg 99.36
cd01988132 Na_H_Antiporter_C The C-terminal domain of a subfa 99.23
PRK14856438 nhaA pH-dependent sodium/proton antiporter; Provis 99.13
PRK09560389 nhaA pH-dependent sodium/proton antiporter; Review 99.05
PRK09561388 nhaA pH-dependent sodium/proton antiporter; Review 99.0
PRK14855423 nhaA pH-dependent sodium/proton antiporter; Provis 98.98
PRK14854383 nhaA pH-dependent sodium/proton antiporter; Provis 98.96
COG3004390 NhaA Na+/H+ antiporter [Inorganic ion transport an 98.76
PF06965378 Na_H_antiport_1: Na+/H+ antiporter 1; InterPro: IP 98.75
cd01989146 STK_N The N-terminal domain of Eukaryotic Serine T 98.7
PRK15456142 universal stress protein UspG; Provisional 98.68
PRK15005144 universal stress protein F; Provisional 98.65
cd01987124 USP_OKCHK USP domain is located between the N-term 98.64
cd01989146 STK_N The N-terminal domain of Eukaryotic Serine T 98.58
PF00582140 Usp: Universal stress protein family; InterPro: IP 98.56
PRK09982142 universal stress protein UspD; Provisional 98.52
PRK15005144 universal stress protein F; Provisional 98.49
cd01988132 Na_H_Antiporter_C The C-terminal domain of a subfa 98.49
PRK15118144 universal stress global response regulator UspA; P 98.44
PF00582140 Usp: Universal stress protein family; InterPro: IP 98.4
cd00293130 USP_Like Usp: Universal stress protein family. The 98.38
PRK09982142 universal stress protein UspD; Provisional 98.3
PRK10116142 universal stress protein UspC; Provisional 98.29
PRK11175305 universal stress protein UspE; Provisional 98.28
PRK15456142 universal stress protein UspG; Provisional 98.24
PRK15118144 universal stress global response regulator UspA; P 98.2
cd01987124 USP_OKCHK USP domain is located between the N-term 98.19
PRK10116142 universal stress protein UspC; Provisional 98.12
PF05684378 DUF819: Protein of unknown function (DUF819); Inte 98.01
cd00293130 USP_Like Usp: Universal stress protein family. The 97.95
PRK12460312 2-keto-3-deoxygluconate permease; Provisional 97.86
COG0786404 GltS Na+/glutamate symporter [Amino acid transport 97.69
COG0589154 UspA Universal stress protein UspA and related nuc 97.66
PF03616368 Glt_symporter: Sodium/glutamate symporter; InterPr 97.6
TIGR00698335 conserved hypothetical integral membrane protein. 97.55
PF03812314 KdgT: 2-keto-3-deoxygluconate permease; InterPro: 97.43
PRK12652 357 putative monovalent cation/H+ antiporter subunit E 97.39
TIGR00210398 gltS sodium--glutamate symport carrier (gltS). 97.19
COG0798342 ACR3 Arsenite efflux pump ACR3 and related permeas 97.15
COG0385319 Predicted Na+-dependent transporter [General funct 96.95
PF13593313 DUF4137: SBF-like CPA transporter family (DUF4137) 96.85
PF03601305 Cons_hypoth698: Conserved hypothetical protein 698 96.85
PF03390414 2HCT: 2-hydroxycarboxylate transporter family; Int 96.78
COG0589154 UspA Universal stress protein UspA and related nuc 96.63
COG3493438 CitS Na+/citrate symporter [Energy production and 96.58
PRK12652357 putative monovalent cation/H+ antiporter subunit E 96.56
PRK03562621 glutathione-regulated potassium-efflux system prot 96.4
TIGR00841286 bass bile acid transporter. Functionally character 96.32
TIGR00793314 kdgT 2-keto-3-deoxygluconate transporter. This fam 96.23
TIGR00932273 2a37 transporter, monovalent cation:proton antipor 96.14
PRK03659601 glutathione-regulated potassium-efflux system prot 95.98
PRK10669558 putative cation:proton antiport protein; Provision 95.92
TIGR00832328 acr3 arsenical-resistance protein. The first prote 95.68
PF03601305 Cons_hypoth698: Conserved hypothetical protein 698 95.62
TIGR00783347 ccs citrate carrier protein, CCS family. These pro 95.46
PRK05326562 potassium/proton antiporter; Reviewed 95.33
PF06826169 Asp-Al_Ex: Predicted Permease Membrane Region; Int 95.25
COG0475397 KefB Kef-type K+ transport systems, membrane compo 95.24
PF03956191 DUF340: Membrane protein of unknown function (DUF3 95.17
COG2855334 Predicted membrane protein [Function unknown] 95.01
COG2855334 Predicted membrane protein [Function unknown] 94.82
TIGR00844 810 c_cpa1 na(+)/h(+) antiporter. This model is specif 94.82
PF01758187 SBF: Sodium Bile acid symporter family; InterPro: 94.82
PLN03159 832 cation/H(+) antiporter 15; Provisional 94.6
PRK03818552 putative transporter; Validated 94.45
PRK05274326 2-keto-3-deoxygluconate permease; Provisional 94.44
PRK10490 895 sensor protein KdpD; Provisional 94.34
TIGR00698335 conserved hypothetical integral membrane protein. 94.15
COG3180352 AbrB Putative ammonia monooxygenase [General funct 94.1
TIGR01625154 YidE_YbjL_dupl AspT/YidE/YbjL antiporter duplicati 93.03
TIGR00831525 a_cpa1 Na+/H+ antiporter, bacterial form. This mod 93.01
TIGR03802562 Asp_Ala_antiprt aspartate-alanine antiporter. All 92.78
PRK04972558 putative transporter; Provisional 92.54
TIGR03802562 Asp_Ala_antiprt aspartate-alanine antiporter. All 91.83
PF05145318 AmoA: Putative ammonia monooxygenase; InterPro: IP 91.77
COG2205 890 KdpD Osmosensitive K+ channel histidine kinase [Si 91.49
TIGR03082156 Gneg_AbrB_dup membrane protein AbrB duplication. T 90.97
TIGR03136399 malonate_biotin Na+-transporting malonate decarbox 90.72
TIGR00210398 gltS sodium--glutamate symport carrier (gltS). 90.01
PF03977360 OAD_beta: Na+-transporting oxaloacetate decarboxyl 89.61
TIGR00946321 2a69 he Auxin Efflux Carrier (AEC) Family. 89.46
TIGR03082156 Gneg_AbrB_dup membrane protein AbrB duplication. T 88.83
COG1346230 LrgB Putative effector of murein hydrolase [Cell e 88.57
PRK04288232 antiholin-like protein LrgB; Provisional 87.27
PRK10490 895 sensor protein KdpD; Provisional 87.25
PRK12460312 2-keto-3-deoxygluconate permease; Provisional 86.74
TIGR00808254 malonate_madM malonate transporter, MadM subunit. 86.62
PRK04972558 putative transporter; Provisional 86.62
COG2985544 Predicted permease [General function prediction on 85.8
KOG2310 646 consensus DNA repair exonuclease MRE11 [Replicatio 85.08
COG0025429 NhaP NhaP-type Na+/H+ and K+/H+ antiporters [Inorg 83.63
PF05145318 AmoA: Putative ammonia monooxygenase; InterPro: IP 83.39
PRK03818552 putative transporter; Validated 83.17
COG3329372 Predicted permease [General function prediction on 81.39
>PLN03159 cation/H(+) antiporter 15; Provisional Back     alignment and domain information 
Probab=100.00  E-value=1.1e-151  Score=1375.21  Aligned_cols=784  Identities=43%  Similarity=0.772  Sum_probs=701.7

Q ss_pred             ccccccccccCCCCccCCCCCCccHHHHHHHHHHHHHHHHHHHHhhcccCCCchHHHHHHHHhhCcccccCcCCCCchhH
Q 043953           23 QVCYPEEFNKYDSPWQRQNPMMRAVPLLATELGFAIVAIRLFIILLKPLHQPRFIPELLTSILIGPSTFGTFESLSPDTI  102 (868)
Q Consensus        23 ~~c~~~~~~~s~g~~~~~~pl~~~l~~lll~i~lil~~~~l~~~l~~rl~~P~iv~~IlaGilLGPs~Lg~~~~~~~~~~  102 (868)
                      .+|+.+.+.+|+|+|+|+||+++++|++++|+++++++++++++++||+|||++++||++|+++||+++|+++.      
T Consensus        17 ~~c~~~~~~~s~g~~~g~~pl~~~l~~~llql~lil~~a~l~~~ll~rl~~P~ivgeIlaGIlLGPs~lg~i~~------   90 (832)
T PLN03159         17 VVCYAPMMITTNGIWQGDNPLDFSLPLFILQLTLVVVTTRLLVFILKPFRQPRVISEILGGVILGPSVLGQSEV------   90 (832)
T ss_pred             cccccCCCccCCcccccCCcccchHHHHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHhcCHhhhCcChh------
Confidence            36996667899999999999999999999999999999999999999999999999999999999999999876      


Q ss_pred             HhhhhhcCCCcchHHHHHHHHHHHHHHHHHHhhccChHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHhhhcccCCCcch
Q 043953          103 VKQMMKLFPYENTVLLETFSSLGLTFYMFLVGLEMDVSAVKRMEKKSLSIAFAGIVIPFCIGAALHFVPIHEGITRESPN  182 (868)
Q Consensus       103 ~~~~~~lfp~~~~~~l~~la~lgl~~llF~~Gle~d~~~l~~~~k~~~~ia~~~~llp~~~g~~~~~~l~~~~~~~~~~~  182 (868)
                        +.+.+||.++.+.+++++++|++|+||++|+|+|++.+|+++|+++.+|+.++++|+++|+++++++... .......
T Consensus        91 --~~~~~fp~~~~~~l~~la~lGlillmFliGLE~Dl~~lr~~~k~a~~ia~~~~ilpf~lg~~~~~~l~~~-~~~~~~~  167 (832)
T PLN03159         91 --FANTIFPLRSVMVLETMANLGLLYFLFLVGVEMDISVIRRTGKKALAIAIAGMALPFCIGLAFSFIFHQV-SRNVHQG  167 (832)
T ss_pred             --hhhhcCCcchHHHHHHHHHHHHHHHHHHHHHcCcHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHhhc-ccccchh
Confidence              8899999988889999999999999999999999999999999999999999999999999888877432 1112223


Q ss_pred             HHHHHHHHHHhhccHHHHHHHHHhcCcccChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCCCCchhhHHHHHHHH
Q 043953          183 LGALFWAISLTITSFPDLARILSDVKLLHTDIGKTALSSAIVNDLSSWFLLVLVIVAFNHYSKHRHGPALTELGAFLMAM  262 (868)
Q Consensus       183 ~~~l~lg~~ls~Ts~~vv~~iL~el~ll~s~~g~l~ls~a~v~D~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  262 (868)
                      ..++++|+++|.||+|+++++|+|+|+++++.||+++++++++|+++|++++++.++...     +.+.    ...++.+
T Consensus       168 ~~~l~~g~alS~Ts~pVv~riL~Elkll~s~~GrlaLsaavv~Dl~~~ilLav~~~l~~~-----~~~~----~~~l~~~  238 (832)
T PLN03159        168 TFILFLGVALSVTAFPVLARILAEIKLINTELGRIAMSAALVNDMCAWILLALAIALAEN-----DSTS----LASLWVL  238 (832)
T ss_pred             HHHHHHHHHHHHhhHHHHHHHHHHcCcccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-----CCcc----hhHHHHH
Confidence            567899999999999999999999999999999999999999999999999988776544     2222    3356667


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhhhhCCCCchhHHHHHHHHHHHHHHHHHHhchhhhHHHHHHHhhcCCCchhhHHHH
Q 043953          263 LPIICFILIFWFVLRPCIAWMIKETKKKAGKFSDTHISVILLGVVVCGFIADGCGMHSMAGGFIFGLIIPNGELAINIME  342 (868)
Q Consensus       263 ~~~~~~~~~~~~v~r~~~~~l~~~~~~~~~~~~e~~~~~il~~~~~~~~lae~~g~~~~lGafvaGl~l~~~~~~~~l~~  342 (868)
                      +..+++++++.+++||++.|+.|++ +++++.++.++.+++++++++++++|.+|+|+++|||++|+++|++++++++.+
T Consensus       239 l~~~~f~~~~~~v~r~~~~~~~r~~-~~~~~~~e~~v~~il~~vl~~a~lae~~Gl~~ilGAFlaGl~lp~~~~~~~l~e  317 (832)
T PLN03159        239 LSSVAFVLFCFYVVRPGIWWIIRRT-PEGETFSEFYICLILTGVMISGFITDAIGTHSVFGAFVFGLVIPNGPLGVTLIE  317 (832)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhC-cCCCCcccchhHHHHHHHHHHHHHHHHhCccHHHHHHHHhhccCCcchHHHHHH
Confidence            7777888888999999999999999 888888999999999999999999999999999999999999999889999999


Q ss_pred             HHHHHHHHhHHHHHHHHhhcccccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhCCChHHHHHHHHHHhhhhhHHH
Q 043953          343 RTEEFISGVWLPSFIVVSGLRTNFLELFSKTKLFYLLLTTIVATSAKILSTVLVALCYGMPVRDGVALGGLMNTKGVMAL  422 (868)
Q Consensus       343 ~l~~~~~~l~~plfFv~~Gl~~dl~~l~~~~~~~~~~~ii~~~~~~K~l~~~l~~~~~~~~~~e~~~lg~~m~~rG~v~l  422 (868)
                      |+++++.++|+|+||+++|+++|+..+.+...|..+++++++++++|+++++++++++|+|++|++.+|++|++||++++
T Consensus       318 kle~~~~~lflPlFFv~vGl~idl~~l~~~~~~~~~~~liv~a~~gK~~g~~l~a~~~g~~~~eal~lG~lm~~kG~~~L  397 (832)
T PLN03159        318 KLEDFVSGLLLPLFFAISGLKTNVTKIQGPATWGLLVLVIIMASAGKIMGTIIIAFFYTMPFREGITLGFLMNTKGLVEM  397 (832)
T ss_pred             HHHHHHHHHHHHHHHHHhhheeeHHHhcCchHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHhcccHHHH
Confidence            99999999999999999999999988865435666777788899999999999999999999999999999999999999


Q ss_pred             HHHhhccccccCchHHHHHHHHHHHHHHHhHHHHHHHhhhHhhHhhhhhhhhhccCCCCCCCeEEEeecCCCChhhHHHH
Q 043953          423 IVLNEGRSLKAIDNILMAAMVFMLLLMTGLVGPIFFLANKKAKRTRKYKQRTIQRRNPDTELRILTCIHSVGNLSGIINL  502 (868)
Q Consensus       423 il~~~~~~~~ii~~~~~~~lv~~~lv~t~i~~plv~~l~~~~~~~~~~~~r~i~~~~~~~elriLv~v~~~~~~~~li~L  502 (868)
                      ++++++++.|+++++.|++++++++++|++++|++.++|+|+||+..|++|++++.++++|+|||+|+|++++++++++|
T Consensus       398 ii~~ig~~~gvi~~~~f~~lVl~avl~T~i~~Plv~~ly~p~rk~~~~~~r~i~~~~~~~elriL~cv~~~~~v~~li~L  477 (832)
T PLN03159        398 IVLNVGRDQEVLDDESFAVMVLVAVAMTALITPVVTVVYRPARRLVGYKRRTIQRSKHDAELRMLVCVHTPRNVPTIINL  477 (832)
T ss_pred             HHHHHHHhcCccCchhhhHHHHHHHHHHHHHHHHHHHHhCHHhhhccccccccccCCCCCceeEEEEeccCCcHHHHHHH
Confidence            99999999999999999999999998999999999999999999999999999999999999999999999999999999


Q ss_pred             HHhhccCCCCCceEEEEEeeccccccchhhhhhhccccCCCccchhhhccchHHHHHHHHHHHhhCCCeeEEEEEEEecC
Q 043953          503 LELSNATKKSPLCVFAVHLVELTRRASAMLIVHDAFRTKTSDQNSIRELADSDLIINAFRHYQDRNDDITVQPLTAVSSF  582 (868)
Q Consensus       503 l~~~~~~~~sp~~v~~LhLvel~~r~s~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~af~~~~~~~~~v~v~~~t~vs~~  582 (868)
                      ++++++++++|+++|++||||+++|++|++++|+.+++..+..++  ...++|+++++|+.|++++++++|+++|++|||
T Consensus       478 le~s~~t~~sp~~vy~lhLveL~~r~~~~l~~h~~~~~~~~~~~~--~~~~~~~i~~af~~~~~~~~~v~v~~~t~vs~~  555 (832)
T PLN03159        478 LEASHPTKRSPICIYVLHLVELTGRASAMLIVHNTRKSGRPALNR--TQAQSDHIINAFENYEQHAGCVSVQPLTAISPY  555 (832)
T ss_pred             HHhcCCCCCCCceEEEEEEEeecCCCccceeeeeccccccccccc--ccccccHHHHHHHHHHhhcCceEEEEEEEEeCc
Confidence            999999999999999999999999999999999875433222211  234579999999999986458999999999999


Q ss_pred             CCchhHHHHHHHhcCccEEEecCCCCCCCCCCccccchhhHHHHHHHhccCCcceEEEecCCCCCccccccccccccCcc
Q 043953          583 TSIHEDIFEIAEDKVVALILIPFHKQPTADGELQGENHQIREVNNNLLAKAPCSIGILVDRGIGSAVITSAQSSLHGRQG  662 (868)
Q Consensus       583 ~~m~~dI~~~A~e~~adlIIlp~h~~~~~~g~~~~~~~~~r~vn~~Vl~~ApCsVgIlvdrg~~~~~~~~~~~~~~~~~~  662 (868)
                      ++||+|||++|+||++++||+||||+|+.||+++++++.+|.+|+|||++||||||||||||..+..+.+..+.     .
T Consensus       556 ~~mh~dIc~~A~d~~~slIilpfhk~~~~dg~~~~~~~~~r~~n~~VL~~ApCsVgIlVDRg~~~~~~~~~~~~-----~  630 (832)
T PLN03159        556 STMHEDVCNLAEDKRVSLIIIPFHKQQTVDGGMEATNPAFRGVNQNVLANAPCSVGILVDRGLSGATRLASNQV-----S  630 (832)
T ss_pred             ccHHHHHHHHHHhcCCCEEEECCCCccCCCCCccccCchHHHHHHHHHccCCCCEEEEEeCCCCcccccccccc-----c
Confidence            99999999999999999999999999999999999999999999999999999999999999774322233333     6


Q ss_pred             ceEEEeeccCcchHHHHHHHHHhhcCCCeEEEEEEeeecCCCCCCcccccCCCCC-ccc-ccccccchhhhhhHHHHHHH
Q 043953          663 LKLCMLFIGGPDDREALFYAWRMAGKPGVNLTVVRYVYNKDGESGILVEDLNNTE-DED-LVDTARDVKEKELDDEFINE  740 (868)
Q Consensus       663 ~~I~v~f~GG~ddreAL~~A~rma~~~~v~ltvl~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~e~~~d~~~~~~  740 (868)
                      +||+++|+|||||||||+||+|||+||++++||+||++.++..+..  .+....+ ++. .....+++.|+++||++++|
T Consensus       631 ~~v~~~F~GG~DDREALa~a~rma~~p~v~lTVirf~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~e~~~D~~~~~e  708 (832)
T PLN03159        631 HHVAVLFFGGPDDREALAYAWRMSEHPGITLTVMRFIPGEDAAPTA--SQPASSPSDPRIPTVETDGKKERQLDEEYINE  708 (832)
T ss_pred             eeEEEEecCCcchHHHHHHHHHHhcCCCeEEEEEEEEccccccccc--ccccccccccccccccccchhHHHHHHHHHHH
Confidence            8999999999999999999999999999999999999754322110  0000111 111 11111136788999999999


Q ss_pred             HHhhcCCCCceEEEEeecCChHHHHHHHHhhcCCccEEEEccCCCCCCccccCCCCCCCCCccccchhhhccCCCCCccc
Q 043953          741 FRFKTMYDSSITYNDKMVSNVEELVESITTMYGEYELYIIGRGDNVKSPLTMGLSGWVDNPELGPVGETLVSSNSTAHAS  820 (868)
Q Consensus       741 ~~~~~~~~~~v~y~e~~v~~~~e~~~~i~~~~~~~DL~iVGr~~~~~s~~~~gl~~w~e~~eLG~igd~las~d~~~~~S  820 (868)
                      ||.++..+++|.|.||+|+|++||+++||+|+++|||+||||+|+.+|++|+||+||+||||||+|||+|||+||.+++|
T Consensus       709 f~~~~~~~~~v~y~E~~V~~~~e~~~~l~~~~~~ydL~iVGr~~~~~~~~~~gL~~w~e~pELG~iGD~LaS~d~~~~~S  788 (832)
T PLN03159        709 FRARNAGNESIVYTEKVVSNGEETVAAIRSMDSAHDLFIVGRGQGMISPLTAGLTDWSECPELGAIGDLLASSDFAATVS  788 (832)
T ss_pred             HHHhcCCCCceEEEEEecCCHHHHHHHHHHhhccCcEEEEecCCCCCcchhccccccccCCccchhhhHHhcCCCCCcee
Confidence            99999988999999999999999999999999999999999999878999999999999999999999999999999999


Q ss_pred             EEEEecccccccch
Q 043953          821 VLVVQQSSSALFRS  834 (868)
Q Consensus       821 VLVvqq~~~~~~~~  834 (868)
                      |||||||+.+.-..
T Consensus       789 VLVvQQ~~~~~~~~  802 (832)
T PLN03159        789 VLVVQQYVGTGPQP  802 (832)
T ss_pred             EEEEEeeccCCCCc
Confidence            99999999666544

>KOG1650 consensus Predicted K+/H+-antiporter [Inorganic ion transport and metabolism] Back     alignment and domain information
>PRK03562 glutathione-regulated potassium-efflux system protein KefC; Provisional Back     alignment and domain information
>PRK10669 putative cation:proton antiport protein; Provisional Back     alignment and domain information
>PRK03659 glutathione-regulated potassium-efflux system protein KefB; Provisional Back     alignment and domain information
>COG0475 KefB Kef-type K+ transport systems, membrane components [Inorganic ion transport and metabolism] Back     alignment and domain information
>PRK05326 potassium/proton antiporter; Reviewed Back     alignment and domain information
>COG4651 RosB Kef-type K+ transport system, predicted NAD-binding component [Inorganic ion transport and metabolism] Back     alignment and domain information
>TIGR00932 2a37 transporter, monovalent cation:proton antiporter-2 (CPA2) family Back     alignment and domain information
>PF00999 Na_H_Exchanger: Sodium/hydrogen exchanger family; InterPro: IPR006153 Sodium proton exchangers (NHEs) constitute a large family of integral membrane protein transporters that are responsible for the counter-transport of protons and sodium ions across lipid bilayers [, ] Back     alignment and domain information
>TIGR00844 c_cpa1 na(+)/h(+) antiporter Back     alignment and domain information
>TIGR00831 a_cpa1 Na+/H+ antiporter, bacterial form Back     alignment and domain information
>COG0025 NhaP NhaP-type Na+/H+ and K+/H+ antiporters [Inorganic ion transport and metabolism] Back     alignment and domain information
>TIGR00840 b_cpa1 sodium/hydrogen exchanger 3 Back     alignment and domain information
>COG3263 NhaP-type Na+/H+ and K+/H+ antiporters with a unique C-terminal domain [Inorganic ion transport and metabolism] Back     alignment and domain information
>KOG1965 consensus Sodium/hydrogen exchanger protein [Inorganic ion transport and metabolism] Back     alignment and domain information
>KOG4505 consensus Na+/H+ antiporter [Inorganic ion transport and metabolism] Back     alignment and domain information
>PRK14853 nhaA pH-dependent sodium/proton antiporter; Provisional Back     alignment and domain information
>PRK11175 universal stress protein UspE; Provisional Back     alignment and domain information
>TIGR00773 NhaA Na+/H+ antiporter NhaA Back     alignment and domain information
>KOG1966 consensus Sodium/hydrogen exchanger protein [Inorganic ion transport and metabolism] Back     alignment and domain information
>cd01988 Na_H_Antiporter_C The C-terminal domain of a subfamily of Na+ /H+ antiporter existed in bacteria and archea Back     alignment and domain information
>PRK14856 nhaA pH-dependent sodium/proton antiporter; Provisional Back     alignment and domain information
>PRK09560 nhaA pH-dependent sodium/proton antiporter; Reviewed Back     alignment and domain information
>PRK09561 nhaA pH-dependent sodium/proton antiporter; Reviewed Back     alignment and domain information
>PRK14855 nhaA pH-dependent sodium/proton antiporter; Provisional Back     alignment and domain information
>PRK14854 nhaA pH-dependent sodium/proton antiporter; Provisional Back     alignment and domain information
>COG3004 NhaA Na+/H+ antiporter [Inorganic ion transport and metabolism] Back     alignment and domain information
>PF06965 Na_H_antiport_1: Na+/H+ antiporter 1; InterPro: IPR004670 NhaA is a sodium ion/proton antiporter that uses the proton electrochemical gradient to expel sodium ions from the cytoplasm and functions primarily in the adaptation to high salinity at alkaline pH Back     alignment and domain information
>cd01989 STK_N The N-terminal domain of Eukaryotic Serine Threonine kinases Back     alignment and domain information
>PRK15456 universal stress protein UspG; Provisional Back     alignment and domain information
>PRK15005 universal stress protein F; Provisional Back     alignment and domain information
>cd01987 USP_OKCHK USP domain is located between the N-terminal sensor domain and C-terminal catalytic domain of this Osmosensitive K+ channel histidine kinase family Back     alignment and domain information
>cd01989 STK_N The N-terminal domain of Eukaryotic Serine Threonine kinases Back     alignment and domain information
>PF00582 Usp: Universal stress protein family; InterPro: IPR006016 The universal stress protein UspA P28242 from SWISSPROT [] is a small cytoplasmic bacterial protein whose expression is enhanced when the cell is exposed to stress agents Back     alignment and domain information
>PRK09982 universal stress protein UspD; Provisional Back     alignment and domain information
>PRK15005 universal stress protein F; Provisional Back     alignment and domain information
>cd01988 Na_H_Antiporter_C The C-terminal domain of a subfamily of Na+ /H+ antiporter existed in bacteria and archea Back     alignment and domain information
>PRK15118 universal stress global response regulator UspA; Provisional Back     alignment and domain information
>PF00582 Usp: Universal stress protein family; InterPro: IPR006016 The universal stress protein UspA P28242 from SWISSPROT [] is a small cytoplasmic bacterial protein whose expression is enhanced when the cell is exposed to stress agents Back     alignment and domain information
>cd00293 USP_Like Usp: Universal stress protein family Back     alignment and domain information
>PRK09982 universal stress protein UspD; Provisional Back     alignment and domain information
>PRK10116 universal stress protein UspC; Provisional Back     alignment and domain information
>PRK11175 universal stress protein UspE; Provisional Back     alignment and domain information
>PRK15456 universal stress protein UspG; Provisional Back     alignment and domain information
>PRK15118 universal stress global response regulator UspA; Provisional Back     alignment and domain information
>cd01987 USP_OKCHK USP domain is located between the N-terminal sensor domain and C-terminal catalytic domain of this Osmosensitive K+ channel histidine kinase family Back     alignment and domain information
>PRK10116 universal stress protein UspC; Provisional Back     alignment and domain information
>PF05684 DUF819: Protein of unknown function (DUF819); InterPro: IPR008537 This family contains proteins of unknown function from archaeal, bacterial and plant species Back     alignment and domain information
>cd00293 USP_Like Usp: Universal stress protein family Back     alignment and domain information
>PRK12460 2-keto-3-deoxygluconate permease; Provisional Back     alignment and domain information
>COG0786 GltS Na+/glutamate symporter [Amino acid transport and metabolism] Back     alignment and domain information
>COG0589 UspA Universal stress protein UspA and related nucleotide-binding proteins [Signal transduction mechanisms] Back     alignment and domain information
>PF03616 Glt_symporter: Sodium/glutamate symporter; InterPro: IPR004445 This is a family of sodium/glutamate symporters (glutamate permeases), which catalyse the sodium-dependent uptake of extracellular glutamate Back     alignment and domain information
>TIGR00698 conserved hypothetical integral membrane protein Back     alignment and domain information
>PF03812 KdgT: 2-keto-3-deoxygluconate permease; InterPro: IPR004684 This family includes the characterised 2-Keto-3-Deoxygluconate transporters from Bacillus subtilis and Erwinia chrysanthemi Back     alignment and domain information
>PRK12652 putative monovalent cation/H+ antiporter subunit E; Reviewed Back     alignment and domain information
>TIGR00210 gltS sodium--glutamate symport carrier (gltS) Back     alignment and domain information
>COG0798 ACR3 Arsenite efflux pump ACR3 and related permeases [Inorganic ion transport and metabolism] Back     alignment and domain information
>COG0385 Predicted Na+-dependent transporter [General function prediction only] Back     alignment and domain information
>PF13593 DUF4137: SBF-like CPA transporter family (DUF4137) Back     alignment and domain information
>PF03601 Cons_hypoth698: Conserved hypothetical protein 698; InterPro: IPR018383 This entry represents a family of uncharacterised multi-pass membrane proteins Back     alignment and domain information
>PF03390 2HCT: 2-hydroxycarboxylate transporter family; InterPro: IPR004679 The 2-hydroxycarboxylate transporter family is a family of secondary transporters found exclusively in the bacterial kingdom Back     alignment and domain information
>COG0589 UspA Universal stress protein UspA and related nucleotide-binding proteins [Signal transduction mechanisms] Back     alignment and domain information
>COG3493 CitS Na+/citrate symporter [Energy production and conversion] Back     alignment and domain information
>PRK12652 putative monovalent cation/H+ antiporter subunit E; Reviewed Back     alignment and domain information
>PRK03562 glutathione-regulated potassium-efflux system protein KefC; Provisional Back     alignment and domain information
>TIGR00841 bass bile acid transporter Back     alignment and domain information
>TIGR00793 kdgT 2-keto-3-deoxygluconate transporter Back     alignment and domain information
>TIGR00932 2a37 transporter, monovalent cation:proton antiporter-2 (CPA2) family Back     alignment and domain information
>PRK03659 glutathione-regulated potassium-efflux system protein KefB; Provisional Back     alignment and domain information
>PRK10669 putative cation:proton antiport protein; Provisional Back     alignment and domain information
>TIGR00832 acr3 arsenical-resistance protein Back     alignment and domain information
>PF03601 Cons_hypoth698: Conserved hypothetical protein 698; InterPro: IPR018383 This entry represents a family of uncharacterised multi-pass membrane proteins Back     alignment and domain information
>TIGR00783 ccs citrate carrier protein, CCS family Back     alignment and domain information
>PRK05326 potassium/proton antiporter; Reviewed Back     alignment and domain information
>PF06826 Asp-Al_Ex: Predicted Permease Membrane Region; InterPro: IPR006512 These sequences contain a domain that is duplicated in HI0035 of Haemophilus influenzae, in YidE and YbjL of Escherichia coli, and in a number of other putative transporters Back     alignment and domain information
>COG0475 KefB Kef-type K+ transport systems, membrane components [Inorganic ion transport and metabolism] Back     alignment and domain information
>PF03956 DUF340: Membrane protein of unknown function (DUF340); InterPro: IPR005642 Members of this family contain a conserved core of four predicted transmembrane segments Back     alignment and domain information
>COG2855 Predicted membrane protein [Function unknown] Back     alignment and domain information
>COG2855 Predicted membrane protein [Function unknown] Back     alignment and domain information
>TIGR00844 c_cpa1 na(+)/h(+) antiporter Back     alignment and domain information
>PF01758 SBF: Sodium Bile acid symporter family; InterPro: IPR002657 This family of proteins are found both in prokaryotes and eukaryotes Back     alignment and domain information
>PLN03159 cation/H(+) antiporter 15; Provisional Back     alignment and domain information
>PRK03818 putative transporter; Validated Back     alignment and domain information
>PRK05274 2-keto-3-deoxygluconate permease; Provisional Back     alignment and domain information
>PRK10490 sensor protein KdpD; Provisional Back     alignment and domain information
>TIGR00698 conserved hypothetical integral membrane protein Back     alignment and domain information
>COG3180 AbrB Putative ammonia monooxygenase [General function prediction only] Back     alignment and domain information
>TIGR01625 YidE_YbjL_dupl AspT/YidE/YbjL antiporter duplication domain Back     alignment and domain information
>TIGR00831 a_cpa1 Na+/H+ antiporter, bacterial form Back     alignment and domain information
>TIGR03802 Asp_Ala_antiprt aspartate-alanine antiporter Back     alignment and domain information
>PRK04972 putative transporter; Provisional Back     alignment and domain information
>TIGR03802 Asp_Ala_antiprt aspartate-alanine antiporter Back     alignment and domain information
>PF05145 AmoA: Putative ammonia monooxygenase; InterPro: IPR007820 This family contains sequences annotated as ammonia monooxygenase Back     alignment and domain information
>COG2205 KdpD Osmosensitive K+ channel histidine kinase [Signal transduction mechanisms] Back     alignment and domain information
>TIGR03082 Gneg_AbrB_dup membrane protein AbrB duplication Back     alignment and domain information
>TIGR03136 malonate_biotin Na+-transporting malonate decarboxylase, carboxybiotin decarboxylase subunit Back     alignment and domain information
>TIGR00210 gltS sodium--glutamate symport carrier (gltS) Back     alignment and domain information
>PF03977 OAD_beta: Na+-transporting oxaloacetate decarboxylase beta subunit; InterPro: IPR005661 Members of this family are integral membrane proteins Back     alignment and domain information
>TIGR00946 2a69 he Auxin Efflux Carrier (AEC) Family Back     alignment and domain information
>TIGR03082 Gneg_AbrB_dup membrane protein AbrB duplication Back     alignment and domain information
>COG1346 LrgB Putative effector of murein hydrolase [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>PRK04288 antiholin-like protein LrgB; Provisional Back     alignment and domain information
>PRK10490 sensor protein KdpD; Provisional Back     alignment and domain information
>PRK12460 2-keto-3-deoxygluconate permease; Provisional Back     alignment and domain information
>TIGR00808 malonate_madM malonate transporter, MadM subunit Back     alignment and domain information
>PRK04972 putative transporter; Provisional Back     alignment and domain information
>COG2985 Predicted permease [General function prediction only] Back     alignment and domain information
>KOG2310 consensus DNA repair exonuclease MRE11 [Replication, recombination and repair] Back     alignment and domain information
>COG0025 NhaP NhaP-type Na+/H+ and K+/H+ antiporters [Inorganic ion transport and metabolism] Back     alignment and domain information
>PF05145 AmoA: Putative ammonia monooxygenase; InterPro: IPR007820 This family contains sequences annotated as ammonia monooxygenase Back     alignment and domain information
>PRK03818 putative transporter; Validated Back     alignment and domain information
>COG3329 Predicted permease [General function prediction only] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query868
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 1e-06
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
 Score = 51.8 bits (123), Expect = 1e-06
 Identities = 91/639 (14%), Positives = 171/639 (26%), Gaps = 237/639 (37%)

Query: 325 FIFGLIIPNGELAINIMERTEEFISGV------WLPSFIVV-----SGLRTNFLE----L 369
            +F  ++   E    ++++   F+  V      +L S I       S +   ++E    L
Sbjct: 66  RLFWTLLSKQE---EMVQK---FVEEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQRDRL 119

Query: 370 FSKTKLF----------YLLLTTIVATSAKILSTVLVALCYGMPVRDGVALGGLMNTKGV 419
           ++  ++F          YL L        +    VL+    G+    G    G    K  
Sbjct: 120 YNDNQVFAKYNVSRLQPYLKLRQ-ALLELRPAKNVLI---DGVL---GS---G----KTW 165

Query: 420 MALIVLNEGRSLKAIDNILMAAMVFMLLLMTGLVGPIFFLANKKAKRTRKYKQRTI-QRR 478
           +AL V    +    +D                    IF+L               +    
Sbjct: 166 VALDVCLSYKVQCKMDF------------------KIFWL--------------NLKNCN 193

Query: 479 NPDTELRILTCIHSVGNLSGII--NLLELSNATKKSPLCVFAV-----HLVELTRRASAM 531
           +P+T L +L        L   I  N    S+ +    L + ++      L++     + +
Sbjct: 194 SPETVLEMLQ------KLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCL 247

Query: 532 LIVHDAFRTKTSDQNSIRELADSDLIINAFRHYQDRNDDITVQPLTAVSSFTSIHEDIFE 591
           L++ +              + ++    NAF        +++ + L      T+       
Sbjct: 248 LVLLN--------------VQNAK-AWNAF--------NLSCKIL-----LTT------- 272

Query: 592 IAEDKVVALILIPFH-KQPTADGELQGENHQIREVNNNLLAKA--------P---CSIGI 639
               K V   L        + D           EV + LL K         P    +   
Sbjct: 273 --RFKQVTDFLSAATTTHISLDHHSMTLTP--DEVKS-LLLKYLDCRPQDLPREVLTTNP 327

Query: 640 LVDRGIG------------------SAVITSAQSSLHG------RQGLKLCMLFIGGPDD 675
                I                     + T  +SSL+       R+      +F   P  
Sbjct: 328 RRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLSVF---PPS 384

Query: 676 ----REALFYAWRMAGKPGVNLTVVRYVYNKDGESGILVEDLNNTE----DEDLVDTARD 727
                  L   W       V  + V  V NK  +  ++ +    +        L    + 
Sbjct: 385 AHIPTILLSLIWF-----DVIKSDVMVVVNKLHKYSLVEKQPKESTISIPSIYLELKVKL 439

Query: 728 VKEKELDDEFINEFRFKTMYDS---SITYNDK----------MVSNVEELVESITTMY-- 772
             E  L    ++ +     +DS      Y D+                E +     ++  
Sbjct: 440 ENEYALHRSIVDHYNIPKTFDSDDLIPPYLDQYFYSHIGHHLKNIEHPERMTLFRMVFLD 499

Query: 773 ----------------------------GEYELYIIGRGDNVKSPLTMGLSGWVDNPELG 804
                                         Y+ YI    D     L   +  ++   E  
Sbjct: 500 FRFLEQKIRHDSTAWNASGSILNTLQQLKFYKPYIC-DNDPKYERLVNAILDFLPKIE-- 556

Query: 805 PVGETLVSSNSTAHASVL--VVQQSSSALFRSESLQVKR 841
              E L+ S    +  +L   +     A+F     QV+R
Sbjct: 557 ---ENLICSK---YTDLLRIALMAEDEAIFEEAHKQVQR 589

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query868
1zcd_A388 Na(+)/H(+) antiporter 1; membrane protein; 3.45A { 99.88
3mt0_A290 Uncharacterized protein PA1789; structural genomic 99.71
3olq_A319 Universal stress protein E; structural genomics, P 99.67
3cis_A309 Uncharacterized protein; alpha/beta hydrolase, ATP 99.66
3ab8_A268 Putative uncharacterized protein TTHA0350; tandem- 99.65
3loq_A294 Universal stress protein; structural genomics, PSI 99.64
3s3t_A146 Nucleotide-binding protein, universal stress PROT 98.79
3hgm_A147 Universal stress protein TEAD; rossman fold, signa 98.76
3fdx_A143 Putative filament protein / universal stress PROT; 98.74
1mjh_A162 Protein (ATP-binding domain of protein MJ0577); hy 98.73
3idf_A138 USP-like protein; universal, stress, PSI, MCSG, st 98.71
3fg9_A156 Protein of universal stress protein USPA family; A 98.68
3dlo_A155 Universal stress protein; unknown function, struct 98.67
2dum_A170 Hypothetical protein PH0823; conserved hypothetica 98.65
2z08_A137 Universal stress protein family; uncharacterized c 98.64
3s3t_A146 Nucleotide-binding protein, universal stress PROT 98.64
3tnj_A150 Universal stress protein (USP); structural genomic 98.6
1tq8_A163 Hypothetical protein RV1636; MTCY01B2.28, structur 98.59
2gm3_A175 Unknown protein; AT3G01520, putative ethylene-resp 98.56
3dlo_A155 Universal stress protein; unknown function, struct 98.55
3fdx_A143 Putative filament protein / universal stress PROT; 98.54
3hgm_A147 Universal stress protein TEAD; rossman fold, signa 98.53
3tnj_A150 Universal stress protein (USP); structural genomic 98.5
1mjh_A162 Protein (ATP-binding domain of protein MJ0577); hy 98.48
2z08_A137 Universal stress protein family; uncharacterized c 98.47
2dum_A170 Hypothetical protein PH0823; conserved hypothetica 98.44
3idf_A138 USP-like protein; universal, stress, PSI, MCSG, st 98.42
1tq8_A163 Hypothetical protein RV1636; MTCY01B2.28, structur 98.41
1jmv_A141 USPA, universal stress protein A; chaperone; 1.85A 98.39
3fg9_A156 Protein of universal stress protein USPA family; A 98.31
1q77_A138 Hypothetical protein AQ_178; structural genomics, 98.19
1jmv_A141 USPA, universal stress protein A; chaperone; 1.85A 98.18
2gm3_A175 Unknown protein; AT3G01520, putative ethylene-resp 98.14
3mt0_A290 Uncharacterized protein PA1789; structural genomic 98.11
3ab8_A268 Putative uncharacterized protein TTHA0350; tandem- 98.08
1q77_A138 Hypothetical protein AQ_178; structural genomics, 98.03
3cis_A 309 Uncharacterized protein; alpha/beta hydrolase, ATP 98.03
3olq_A319 Universal stress protein E; structural genomics, P 98.02
3loq_A294 Universal stress protein; structural genomics, PSI 97.89
3zux_A332 Transporter, ASBTNM; transport protein, membrane p 97.81
3g40_A294 Na-K-CL cotransporter; alpha/beta fold 10-stranded 94.75
>1zcd_A Na(+)/H(+) antiporter 1; membrane protein; 3.45A {Escherichia coli} PDB: 3fi1_A Back     alignment and structure
Probab=99.88  E-value=4.7e-23  Score=227.26  Aligned_cols=300  Identities=14%  Similarity=0.107  Sum_probs=217.3

Q ss_pred             HHHHHHHHHHHHHHHHHhhccChHHH----Hhhhh--hHHHHHHHHHHHHHHHHHHHHHHhhhcccCCCcchHHHHHHHH
Q 043953          117 LLETFSSLGLTFYMFLVGLEMDVSAV----KRMEK--KSLSIAFAGIVIPFCIGAALHFVPIHEGITRESPNLGALFWAI  190 (868)
Q Consensus       117 ~l~~la~lgl~~llF~~Gle~d~~~l----~~~~k--~~~~ia~~~~llp~~~g~~~~~~l~~~~~~~~~~~~~~l~lg~  190 (868)
                      ...-+.+-.+.+|+|.+|+|+|.+.+    ++.+|  .....++.|+++|++++.    .+....       ..+.....
T Consensus        59 l~~windglm~lFff~vGLEik~e~l~G~L~~~~~a~~p~~aAlgGmivP~~iy~----~~~~~~-------~~~~~gw~  127 (388)
T 1zcd_A           59 MLLWINDALMAVFFLLVGLEVKRELMQGSLASLRQAAFPVIAAIGGMIVPALLYL----AFNYAD-------PITREGWA  127 (388)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHSTTTSSTTTSHHHHHHHHHHTTTTHHHHG----GGCCSS-------TTHHHHTS
T ss_pred             HHHHHhhHhHHHHHHHHHHHhhHHHhcchhhhhhhHHHHHHHHHHHHHHHHHHHH----HHhcCC-------hhhhhhhH
Confidence            45667788899999999999998877    55444  478889999999988842    222211       33456666


Q ss_pred             HHhhccHHHHHHHHHhcCc-ccChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCCCCchhhHHHHHHHHHHHHHHH
Q 043953          191 SLTITSFPDLARILSDVKL-LHTDIGKTALSSAIVNDLSSWFLLVLVIVAFNHYSKHRHGPALTELGAFLMAMLPIICFI  269 (868)
Q Consensus       191 ~ls~Ts~~vv~~iL~el~l-l~s~~g~l~ls~a~v~D~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  269 (868)
                      +.+.|+.+....++..++. .++..++.+++.|++||+.+|++++++..   .     +.+.       . .+...+++.
T Consensus       128 ip~ATdIAfal~vL~~lg~~~p~~l~~flLalAvvDDl~aiivIAvfyt---~-----~~~~-------~-~l~~~~~~~  191 (388)
T 1zcd_A          128 IPAATDIAFALGVLALLGSRVPLALKIFLMALAIIDDLGAIIIIALFYT---N-----DLSM-------A-SLGVAAVAI  191 (388)
T ss_dssp             SSSCCCHHHHHHHHHSSCSSSCSSSHHHHHHHHHHHHHHHHHHHHHHSC---C-----CCCH-------H-HHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHHHHc---C-----CccH-------H-HHHHHHHHH
Confidence            7788999999999998754 56667799999999999999999998852   2     2221       1 111111111


Q ss_pred             HHHHHHHHHHHHHHHHHhhhhCCCCchhHHHHHHHHHHHHHHHHHHhchhhhHHHHHHHhhcCC-C----chhhHHHHHH
Q 043953          270 LIFWFVLRPCIAWMIKETKKKAGKFSDTHISVILLGVVVCGFIADGCGMHSMAGGFIFGLIIPN-G----ELAINIMERT  344 (868)
Q Consensus       270 ~~~~~v~r~~~~~l~~~~~~~~~~~~e~~~~~il~~~~~~~~lae~~g~~~~lGafvaGl~l~~-~----~~~~~l~~~l  344 (868)
                      ++.         ++.+|. .    .+....+..+ . +.+.+.++..|+|+.+|+|++|+++|. +    +..+++++++
T Consensus       192 ~~~---------~~l~r~-~----v~~~~~y~~l-g-l~~w~~~~~sGvHatigg~l~Gl~ip~~~~~~~~~~~~le~~l  255 (388)
T 1zcd_A          192 AVL---------AVLNLC-G----ARRTGVYILV-G-VVLWTAVLKSGVHATLAGVIVGFFIPLKEKHGRSPAKRLEHVL  255 (388)
T ss_dssp             HHH---------HHHHHT-T----CCCTHHHHHH-H-HHHHHHTTTSHHHHHHHHHHHHHHSCCCGGGSSCHHHHHHHHH
T ss_pred             HHH---------HHHHHh-c----chhHHHHHHH-H-HHHHHHHHHhCccHHHHHHHHHHhccCCCccCCCHHHHHHHHH
Confidence            111         222332 1    2223333333 2 244567799999999999999999998 3    4578999999


Q ss_pred             HHHHHHhHHHHH-HHHhhcccccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHh----------CCChHHHHHHHHH
Q 043953          345 EEFISGVWLPSF-IVVSGLRTNFLELFSKTKLFYLLLTTIVATSAKILSTVLVALCY----------GMPVRDGVALGGL  413 (868)
Q Consensus       345 ~~~~~~l~~plf-Fv~~Gl~~dl~~l~~~~~~~~~~~ii~~~~~~K~l~~~l~~~~~----------~~~~~e~~~lg~~  413 (868)
                      ++++..+++|+| |+..|+++|....... .-.....+++..+++|+++++..++..          |++|+|...+|++
T Consensus       256 ~p~v~~~ilPlFaFanaGv~l~~~~~~~l-~~~~~lgi~~glvvGK~~Gi~~~~~l~~rl~~~~lp~g~~~~~~~~vg~L  334 (388)
T 1zcd_A          256 HPWVAYLILPLFAFANAGVSLQGVTLDGL-TSILPLGIIAGLLIGKPLGISLFCWLALRLKLAHLPEGTTYQQIMVVGIL  334 (388)
T ss_dssp             HHHHHHTHHHHHHHHHCCCCCSSSCCCTH-HHHSSTTTTHHHHHTTGGGSTTHHHHTSSCTTTCCCCSCCGGGGTTHHHH
T ss_pred             HHHHHHHHHHHHHHHhcCeeecccchhhc-cChHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcCCCCCCHHHHHHHHHH
Confidence            999989999999 9999999997533221 111223555666999999977777776          8999999999999


Q ss_pred             HhhhhhHHHHHHhhcccccc--CchHHHHHHHHHHHHHHHhHHHHHHHh
Q 043953          414 MNTKGVMALIVLNEGRSLKA--IDNILMAAMVFMLLLMTGLVGPIFFLA  460 (868)
Q Consensus       414 m~~rG~v~lil~~~~~~~~i--i~~~~~~~lv~~~lv~t~i~~plv~~l  460 (868)
                      ++.++++++++++.+++.+.  +.++.+..+++++++++.+.+.++++.
T Consensus       335 ~gigftmsL~Ia~laf~~~~~~~~~~ak~~il~~s~~s~i~g~~~L~~~  383 (388)
T 1zcd_A          335 CGIGFTMSIFIASLAFGSVDPELINWAKLGILVGSISSAVIGYSWLRVR  383 (388)
T ss_dssp             TTCCHHHHHHHHHHHSTTSSCSSHHHHHHHHHHHHHTTTSTTTGGGTTT
T ss_pred             hccchHHHHHHHHHhccCCchhhHhhHHHHHHHHHHHHHHHHHHHHHHh
Confidence            99999999999999998876  356778888888888655555555443
>3mt0_A Uncharacterized protein PA1789; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 1.58A {Pseudomonas aeruginosa} Back     alignment and structure
>3olq_A Universal stress protein E; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: UNL; 1.82A {Proteus mirabilis} Back     alignment and structure
>3cis_A Uncharacterized protein; alpha/beta hydrolase, ATP, universal stress protein, unknown function; HET: ATP; 2.90A {Mycobacterium tuberculosis} PDB: 2jax_A* Back     alignment and structure
>3ab8_A Putative uncharacterized protein TTHA0350; tandem-type universal stress protein, unknown function; HET: ATP; 1.70A {Thermus thermophilus} PDB: 3ab7_A* Back     alignment and structure
>3loq_A Universal stress protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: AMP; 2.32A {Archaeoglobus fulgidus} Back     alignment and structure
>3s3t_A Nucleotide-binding protein, universal stress PROT family; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: ATP; 1.90A {Lactobacillus plantarum} SCOP: c.26.2.0 Back     alignment and structure
>3hgm_A Universal stress protein TEAD; rossman fold, signaling protein; HET: ATP; 1.90A {Halomonas elongata} SCOP: c.26.2.0 Back     alignment and structure
>3fdx_A Putative filament protein / universal stress PROT; structural genomics, APC60640.1, universal protein F, PSI-2; HET: MSE ATP; 1.58A {Klebsiella pneumoniae subsp} PDB: 3fh0_A* Back     alignment and structure
>1mjh_A Protein (ATP-binding domain of protein MJ0577); hypothetical protein, structural genomics, functional assignment; HET: ATP; 1.70A {Methanocaldococcus jannaschii} SCOP: c.26.2.4 Back     alignment and structure
>3idf_A USP-like protein; universal, stress, PSI, MCSG, structural genomics, midwest center for structural genomics structure initiative; 2.00A {Wolinella succinogenes} Back     alignment and structure
>3fg9_A Protein of universal stress protein USPA family; APC60691, nucleotide- binding, lactobacillus plantarum WCFS1, structural genomics PSI-2; 1.47A {Lactobacillus plantarum} Back     alignment and structure
>3dlo_A Universal stress protein; unknown function, structural genomics, PSI-2, protein struct initiative, midwest center for structural genomics; HET: MSE; 1.97A {Archaeoglobus fulgidus} PDB: 3qtb_A* Back     alignment and structure
>2dum_A Hypothetical protein PH0823; conserved hypothetical protein, putative universal protein A structural genomics, NPPSFA; 2.75A {Pyrococcus horikoshii} Back     alignment and structure
>2z08_A Universal stress protein family; uncharacterized conserved protein, structural genomics, unknown function, NPPSFA; HET: ATP; 1.55A {Thermus thermophilus} SCOP: c.26.2.4 PDB: 1wjg_A* 2z09_A* 2z3v_A Back     alignment and structure
>3s3t_A Nucleotide-binding protein, universal stress PROT family; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: ATP; 1.90A {Lactobacillus plantarum} SCOP: c.26.2.0 Back     alignment and structure
>3tnj_A Universal stress protein (USP); structural genomics, PSI-biology, midwest center for structu genomics, MCSG, chaperone; HET: AMP; 2.00A {Nitrosomonas europaea} PDB: 2pfs_A* Back     alignment and structure
>1tq8_A Hypothetical protein RV1636; MTCY01B2.28, structural target, NYSGXRC, PSI, protein structure initiative; 2.40A {Mycobacterium tuberculosis} SCOP: c.26.2.4 Back     alignment and structure
>2gm3_A Unknown protein; AT3G01520, putative ethylene-responsive protein, USP domain, nucleotide binding domain, AMP; HET: MSE AMP; 2.46A {Arabidopsis thaliana} SCOP: c.26.2.4 Back     alignment and structure
>3dlo_A Universal stress protein; unknown function, structural genomics, PSI-2, protein struct initiative, midwest center for structural genomics; HET: MSE; 1.97A {Archaeoglobus fulgidus} PDB: 3qtb_A* Back     alignment and structure
>3fdx_A Putative filament protein / universal stress PROT; structural genomics, APC60640.1, universal protein F, PSI-2; HET: MSE ATP; 1.58A {Klebsiella pneumoniae subsp} PDB: 3fh0_A* Back     alignment and structure
>3hgm_A Universal stress protein TEAD; rossman fold, signaling protein; HET: ATP; 1.90A {Halomonas elongata} SCOP: c.26.2.0 Back     alignment and structure
>3tnj_A Universal stress protein (USP); structural genomics, PSI-biology, midwest center for structu genomics, MCSG, chaperone; HET: AMP; 2.00A {Nitrosomonas europaea} PDB: 2pfs_A* Back     alignment and structure
>1mjh_A Protein (ATP-binding domain of protein MJ0577); hypothetical protein, structural genomics, functional assignment; HET: ATP; 1.70A {Methanocaldococcus jannaschii} SCOP: c.26.2.4 Back     alignment and structure
>2z08_A Universal stress protein family; uncharacterized conserved protein, structural genomics, unknown function, NPPSFA; HET: ATP; 1.55A {Thermus thermophilus} SCOP: c.26.2.4 PDB: 1wjg_A* 2z09_A* 2z3v_A Back     alignment and structure
>2dum_A Hypothetical protein PH0823; conserved hypothetical protein, putative universal protein A structural genomics, NPPSFA; 2.75A {Pyrococcus horikoshii} Back     alignment and structure
>3idf_A USP-like protein; universal, stress, PSI, MCSG, structural genomics, midwest center for structural genomics structure initiative; 2.00A {Wolinella succinogenes} Back     alignment and structure
>1tq8_A Hypothetical protein RV1636; MTCY01B2.28, structural target, NYSGXRC, PSI, protein structure initiative; 2.40A {Mycobacterium tuberculosis} SCOP: c.26.2.4 Back     alignment and structure
>1jmv_A USPA, universal stress protein A; chaperone; 1.85A {Haemophilus influenzae} SCOP: c.26.2.4 Back     alignment and structure
>3fg9_A Protein of universal stress protein USPA family; APC60691, nucleotide- binding, lactobacillus plantarum WCFS1, structural genomics PSI-2; 1.47A {Lactobacillus plantarum} Back     alignment and structure
>1q77_A Hypothetical protein AQ_178; structural genomics, universal stress protein, PSI, protein structure initiative; 2.70A {Aquifex aeolicus} SCOP: c.26.2.4 Back     alignment and structure
>1jmv_A USPA, universal stress protein A; chaperone; 1.85A {Haemophilus influenzae} SCOP: c.26.2.4 Back     alignment and structure
>2gm3_A Unknown protein; AT3G01520, putative ethylene-responsive protein, USP domain, nucleotide binding domain, AMP; HET: MSE AMP; 2.46A {Arabidopsis thaliana} SCOP: c.26.2.4 Back     alignment and structure
>3mt0_A Uncharacterized protein PA1789; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 1.58A {Pseudomonas aeruginosa} Back     alignment and structure
>3ab8_A Putative uncharacterized protein TTHA0350; tandem-type universal stress protein, unknown function; HET: ATP; 1.70A {Thermus thermophilus} PDB: 3ab7_A* Back     alignment and structure
>1q77_A Hypothetical protein AQ_178; structural genomics, universal stress protein, PSI, protein structure initiative; 2.70A {Aquifex aeolicus} SCOP: c.26.2.4 Back     alignment and structure
>3cis_A Uncharacterized protein; alpha/beta hydrolase, ATP, universal stress protein, unknown function; HET: ATP; 2.90A {Mycobacterium tuberculosis} PDB: 2jax_A* Back     alignment and structure
>3olq_A Universal stress protein E; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: UNL; 1.82A {Proteus mirabilis} Back     alignment and structure
>3loq_A Universal stress protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: AMP; 2.32A {Archaeoglobus fulgidus} Back     alignment and structure
>3zux_A Transporter, ASBTNM; transport protein, membrane protein; HET: TCH LDA PTY; 2.20A {Neisseria meningitidis} PDB: 3zuy_A* Back     alignment and structure
>3g40_A Na-K-CL cotransporter; alpha/beta fold 10-stranded twisted beta sheet, transport protein; 1.90A {Methanosarcina acetivorans} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query868
d2z3va1135 Hypothetical protein TTHA0895 {Thermus thermophilu 98.97
d1mjha_160 "Hypothetical" protein MJ0577 {Archaeon Methanococ 98.94
d2z3va1135 Hypothetical protein TTHA0895 {Thermus thermophilu 98.64
d1jmva_140 Universal stress protein A, UspA {Haemophilus infl 98.6
d2gm3a1171 Putative ethylene-responsive protein AT3g01520/F4P 98.6
d1mjha_160 "Hypothetical" protein MJ0577 {Archaeon Methanococ 98.56
d1tq8a_147 Hypothetical protein Rv1636 {Mycobacterium tubercu 98.5
d1tq8a_147 Hypothetical protein Rv1636 {Mycobacterium tubercu 98.33
d1q77a_138 Hypothetical protein Aq_178 {Aquifex aeolicus [Tax 98.31
d1jmva_140 Universal stress protein A, UspA {Haemophilus infl 98.26
d1q77a_138 Hypothetical protein Aq_178 {Aquifex aeolicus [Tax 98.13
d2gm3a1171 Putative ethylene-responsive protein AT3g01520/F4P 97.53
>d2z3va1 c.26.2.4 (A:2-136) Hypothetical protein TTHA0895 {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: Adenine nucleotide alpha hydrolase-like
superfamily: Adenine nucleotide alpha hydrolases-like
family: Universal stress protein-like
domain: Hypothetical protein TTHA0895
species: Thermus thermophilus [TaxId: 274]

Probab=98.97  E-value=4.7e-10  Score=103.92  Aligned_cols=133  Identities=11%  Similarity=0.119  Sum_probs=87.4

Q ss_pred             eEEEeecCCCChhhHHHHHHhhccCCCCCceEEEEEeeccccccchhhhhhhccccCCCccchhhhccchHHHHHHHHHH
Q 043953          485 RILTCIHSVGNLSGIINLLELSNATKKSPLCVFAVHLVELTRRASAMLIVHDAFRTKTSDQNSIRELADSDLIINAFRHY  564 (868)
Q Consensus       485 riLv~v~~~~~~~~li~Ll~~~~~~~~sp~~v~~LhLvel~~r~s~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~af~~~  564 (868)
                      |||+|+++.+....+++.+..++...+  ..++++|+++........-. .+.           ...+..++....++++
T Consensus         3 ~Ilv~~D~s~~s~~a~~~a~~~a~~~~--~~l~ll~V~~~~~~~~~~~~-~~~-----------~~~~~~~~~~~~l~~~   68 (135)
T d2z3va1           3 TILLAYDGSEHARRAAEVAKAEAEAHG--ARLIVVHAYEPVPDYLGEPF-FEE-----------ALRRRLERAEGVLEEA   68 (135)
T ss_dssp             EEEEECCSSHHHHHHHHHHHHHHHHHT--CEEEEEEEECCCCTTCCTTH-HHH-----------HHHHHHHHHHHHHHHH
T ss_pred             EEEEEECCCHHHHHHHHHHHHHHHHcC--CEEEEEEEecCCccccccch-hHH-----------HHHHHHHHHHHHHHHH
Confidence            799999999999999999888876544  46699999875433211100 000           0111223344444444


Q ss_pred             HhhCCCeeEEEEEEEecCCCchhHHHHHHHhcCccEEEecCCCCCCCCCCccccchhhHHHHHHHhccCCcceEEE
Q 043953          565 QDRNDDITVQPLTAVSSFTSIHEDIFEIAEDKVVALILIPFHKQPTADGELQGENHQIREVNNNLLAKAPCSIGIL  640 (868)
Q Consensus       565 ~~~~~~v~v~~~t~vs~~~~m~~dI~~~A~e~~adlIIlp~h~~~~~~g~~~~~~~~~r~vn~~Vl~~ApCsVgIl  640 (868)
                      .+.. +.........+  .+..+.||+.|+++++|+|+||+|++....+.+.++.      .+++++++||||.|.
T Consensus        69 ~~~~-~~~~~~~~~~~--g~~~~~I~~~a~~~~~dliV~G~~~~~~~~~~~~Gs~------~~~ll~~~~~pVlvV  135 (135)
T d2z3va1          69 RALT-GVPKEDALLLE--GVPAEAILQAARAEKADLIVMGTRGLGALGSLFLGSQ------SQRVVAEAPCPVLLV  135 (135)
T ss_dssp             HHHH-CCCGGGEEEEE--SCHHHHHHHHHHHTTCSEEEEESSCSSSCBCSSCBHH------HHHHHHHCSSCEEEE
T ss_pred             HHhc-CCCeEEEEEEc--CChHHHHHHHhhhhheeeEEeccCCCCcccccccCcH------HHHHHHhCCCCEEeC
Confidence            4432 22222222233  5889999999999999999999999876665554443      489999999999763
>d1mjha_ c.26.2.4 (A:) "Hypothetical" protein MJ0577 {Archaeon Methanococcus jannaschii [TaxId: 2190]} Back     information, alignment and structure
>d2z3va1 c.26.2.4 (A:2-136) Hypothetical protein TTHA0895 {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1jmva_ c.26.2.4 (A:) Universal stress protein A, UspA {Haemophilus influenzae [TaxId: 727]} Back     information, alignment and structure
>d2gm3a1 c.26.2.4 (A:5-175) Putative ethylene-responsive protein AT3g01520/F4P13_7 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Back     information, alignment and structure
>d1mjha_ c.26.2.4 (A:) "Hypothetical" protein MJ0577 {Archaeon Methanococcus jannaschii [TaxId: 2190]} Back     information, alignment and structure
>d1tq8a_ c.26.2.4 (A:) Hypothetical protein Rv1636 {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d1tq8a_ c.26.2.4 (A:) Hypothetical protein Rv1636 {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d1q77a_ c.26.2.4 (A:) Hypothetical protein Aq_178 {Aquifex aeolicus [TaxId: 63363]} Back     information, alignment and structure
>d1jmva_ c.26.2.4 (A:) Universal stress protein A, UspA {Haemophilus influenzae [TaxId: 727]} Back     information, alignment and structure
>d1q77a_ c.26.2.4 (A:) Hypothetical protein Aq_178 {Aquifex aeolicus [TaxId: 63363]} Back     information, alignment and structure
>d2gm3a1 c.26.2.4 (A:5-175) Putative ethylene-responsive protein AT3g01520/F4P13_7 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Back     information, alignment and structure