Citrus Sinensis ID: 044020
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
ID ![]() | Alignment graph ![]() | Length ![]() |
Definition ![]() |
RBH(Q2H) ![]() |
RBH(H2Q) ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 563 | 2.2.26 [Sep-21-2011] | |||||||
| Q9M2L4 | 1025 | Putative calcium-transpor | yes | no | 0.989 | 0.543 | 0.734 | 0.0 | |
| O22218 | 1030 | Calcium-transporting ATPa | no | no | 0.994 | 0.543 | 0.736 | 0.0 | |
| Q2RAS0 | 1017 | Probable calcium-transpor | yes | no | 1.0 | 0.553 | 0.703 | 0.0 | |
| Q2QY12 | 1039 | Probable calcium-transpor | yes | no | 1.0 | 0.541 | 0.705 | 0.0 | |
| Q65X71 | 1021 | Probable calcium-transpor | no | no | 0.996 | 0.549 | 0.651 | 0.0 | |
| O81108 | 1014 | Calcium-transporting ATPa | no | no | 0.996 | 0.553 | 0.656 | 0.0 | |
| Q2QMX9 | 1020 | Calcium-transporting ATPa | no | no | 1.0 | 0.551 | 0.652 | 0.0 | |
| O64806 | 1015 | Putative calcium-transpor | no | no | 0.996 | 0.552 | 0.647 | 0.0 | |
| Q37145 | 1020 | Calcium-transporting ATPa | no | no | 1.0 | 0.551 | 0.641 | 0.0 | |
| Q8RUN1 | 1043 | Calcium-transporting ATPa | no | no | 0.991 | 0.534 | 0.655 | 0.0 |
| >sp|Q9M2L4|ACA11_ARATH Putative calcium-transporting ATPase 11, plasma membrane-type OS=Arabidopsis thaliana GN=ACA11 PE=3 SV=1 | Back alignment and function desciption |
|---|
Score = 828 bits (2140), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 416/566 (73%), Positives = 475/566 (83%), Gaps = 9/566 (1%)
Query: 1 MVTAISDYKQSLQFRDLDREKKKIFIQVTRDGQRQKVCTYDLVVGDIVHLSIGDQVPAYG 60
MVTAISDYKQSLQFRDLDREKKKI IQVTRDG RQ+V +DLVVGD+VHLSIGDQVPA G
Sbjct: 210 MVTAISDYKQSLQFRDLDREKKKIIIQVTRDGSRQEVSIHDLVVGDVVHLSIGDQVPADG 269
Query: 61 IFISGHSLLIDESSLSGQSEPRYMYEENPFLLAGTKVQGGSGKMLVTTVGMRTEWGKLME 120
IFISG++L IDESSLSG+SEP ++ +E PFLL+GTKVQ GS KMLVTTVGMRTEWGKLM+
Sbjct: 270 IFISGYNLEIDESSLSGESEPSHVNKEKPFLLSGTKVQNGSAKMLVTTVGMRTEWGKLMD 329
Query: 121 TLNEGGEDETPLQVKLNGVATIIGKIELFFSVLEFLVLIGRFLGEKVIHNEFTDWSSADA 180
TL+EGGEDETPLQVKLNGVATIIGKI L F+VL F+VL RF+ EK T+WSS DA
Sbjct: 330 TLSEGGEDETPLQVKLNGVATIIGKIGLGFAVLTFVVLCIRFVVEKATAGSITEWSSEDA 389
Query: 181 LTLIDYFAVVVTIIDVAVPEGLPLAVTLSLAFAMKKLMNDGALVRHLSACETMGSASCIC 240
LTL+DYFA+ VTII VAVPEGLPLAVTLSLAFAMK+LM+D ALVRHL+ACETMGS++CIC
Sbjct: 390 LTLLDYFAIAVTIIVVAVPEGLPLAVTLSLAFAMKQLMSDRALVRHLAACETMGSSTCIC 449
Query: 241 TDKTRMLTTNHMVVDKIWIANTISNVEGNNRKDILQSEISERVLDITLQAIFQNTGSKVV 300
TDKT LTTNHMVV+K+WI I + N Q +SE+V +I +QAIFQNTGS+VV
Sbjct: 450 TDKTGTLTTNHMVVNKVWICENIKERQEEN----FQLNLSEQVKNILIQAIFQNTGSEVV 505
Query: 301 KDKDGKNSILGTPTESAILEFGLRLGGDFEAQRREFKIVKVEPFNSVRKKMSVLIALPAG 360
KDK+GK ILG+PTE AILEFGL LGGD + QRRE KI+K+EPFNS +KKMSVL + G
Sbjct: 506 KDKEGKTQILGSPTERAILEFGLLLGGDVDTQRREHKILKIEPFNSDKKKMSVLTSHSGG 565
Query: 361 GMRAFCKGASEIVLSMCDKVVSDNGEPVPLSEEQFRNITDVINGFASEALRTLCLAFKDL 420
+RAFCKGASEIVL MC+KVV NGE VPLSEE+ +I+DVI GFASEALRTLCL + DL
Sbjct: 566 KVRAFCKGASEIVLKMCEKVVDSNGESVPLSEEKIASISDVIEGFASEALRTLCLVYTDL 625
Query: 421 NDSSNENNIPDSGYTLIAVVGIKDPVRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAK 480
D + ++P+ GYTL+AVVGIKDPVRPGV+EAVQTC AGITVRMVTGDNI+TA+AIAK
Sbjct: 626 -DEAPRGDLPNGGYTLVAVVGIKDPVRPGVREAVQTCQAAGITVRMVTGDNISTAKAIAK 684
Query: 481 ECGILTSDGEAVEGPEFRNMSPAD---IIPKLQVMARSLPSDKHTLVTQLRNTFGEVVAV 537
ECGILT+ G A+EG +FRN+ P + I+PK+QVMARSLP DKHTLV LR GEVVAV
Sbjct: 685 ECGILTAGGVAIEGSDFRNLPPHEMRAILPKIQVMARSLPLDKHTLVNNLRK-MGEVVAV 743
Query: 538 TGDGTNDASALHEADIGLAMGIAGTE 563
TGDGTNDA ALHEADIGLAMGIAGTE
Sbjct: 744 TGDGTNDAPALHEADIGLAMGIAGTE 769
|
This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the translocation of calcium from the cytosol out of the cell or into organelles. Arabidopsis thaliana (taxid: 3702) EC: 3EC: .EC: 6EC: .EC: 3EC: .EC: 8 |
| >sp|O22218|ACA4_ARATH Calcium-transporting ATPase 4, plasma membrane-type OS=Arabidopsis thaliana GN=ACA4 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 828 bits (2140), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 417/566 (73%), Positives = 475/566 (83%), Gaps = 6/566 (1%)
Query: 1 MVTAISDYKQSLQFRDLDREKKKIFIQVTRDGQRQKVCTYDLVVGDIVHLSIGDQVPAYG 60
MVTAISDYKQSLQFRDLDREKKKI +QVTRDG RQ++ +DLVVGD+VHLSIGDQVPA G
Sbjct: 210 MVTAISDYKQSLQFRDLDREKKKIIVQVTRDGSRQEISIHDLVVGDVVHLSIGDQVPADG 269
Query: 61 IFISGHSLLIDESSLSGQSEPRYMYEENPFLLAGTKVQGGSGKMLVTTVGMRTEWGKLME 120
IFISG++L IDESSLSG+SEP ++ +E PFLL+GTKVQ GS KMLVTTVGMRTEWGKLME
Sbjct: 270 IFISGYNLEIDESSLSGESEPSHVNKEKPFLLSGTKVQNGSAKMLVTTVGMRTEWGKLME 329
Query: 121 TLNEGGEDETPLQVKLNGVATIIGKIELFFSVLEFLVLIGRFLGEKVIHNEFTDWSSADA 180
TL +GGEDETPLQVKLNGVATIIGKI L F+VL F+VL RF+ +K FT+WSS DA
Sbjct: 330 TLVDGGEDETPLQVKLNGVATIIGKIGLSFAVLTFVVLCIRFVLDKATSGSFTNWSSEDA 389
Query: 181 LTLIDYFAVVVTIIDVAVPEGLPLAVTLSLAFAMKKLMNDGALVRHLSACETMGSASCIC 240
LTL+DYFA+ VTII VAVPEGLPLAVTLSLAFAMKKLM+D ALVRHL+ACETMGS++CIC
Sbjct: 390 LTLLDYFAISVTIIVVAVPEGLPLAVTLSLAFAMKKLMSDRALVRHLAACETMGSSTCIC 449
Query: 241 TDKTRMLTTNHMVVDKIWIANTISNVEGNNRKDILQSEISERVLDITLQAIFQNTGSKVV 300
TDKT LTTNHMVV+K+WI + + + K+ + E+SE V LQ IFQNTGS+VV
Sbjct: 450 TDKTGTLTTNHMVVNKVWICDKVQERQ-EGSKESFELELSEEVQSTLLQGIFQNTGSEVV 508
Query: 301 KDKDGKNSILGTPTESAILEFGLRLGGDFEAQRREFKIVKVEPFNSVRKKMSVLIALPAG 360
KDKDG ILG+PTE AILEFGL LGGDF QR+E KI+K+EPFNS +KKMSVLIALP G
Sbjct: 509 KDKDGNTQILGSPTERAILEFGLLLGGDFNTQRKEHKILKIEPFNSDKKKMSVLIALPGG 568
Query: 361 GMRAFCKGASEIVLSMCDKVVSDNGEPVPLSEEQFRNITDVINGFASEALRTLCLAFKDL 420
G RAFCKGASEIVL MC+ VV NGE VPL+EE+ +I+D+I GFASEALRTLCL +KDL
Sbjct: 569 GARAFCKGASEIVLKMCENVVDSNGESVPLTEERITSISDIIEGFASEALRTLCLVYKDL 628
Query: 421 NDSSNENNIPDSGYTLIAVVGIKDPVRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAK 480
D + +PD GYT++AVVGIKDPVRPGV+EAVQTC AGITVRMVTGDNI+TA+AIAK
Sbjct: 629 -DEAPSGELPDGGYTMVAVVGIKDPVRPGVREAVQTCQAAGITVRMVTGDNISTAKAIAK 687
Query: 481 ECGILTSDGEAVEGPEFRNMSPAD---IIPKLQVMARSLPSDKHTLVTQLRNTFGEVVAV 537
ECGI T G A+EG EFR++SP + IIPK+QVMARSLP DKHTLV+ LR GEVVAV
Sbjct: 688 ECGIYTEGGLAIEGSEFRDLSPHEMRAIIPKIQVMARSLPLDKHTLVSNLRK-IGEVVAV 746
Query: 538 TGDGTNDASALHEADIGLAMGIAGTE 563
TGDGTNDA ALHEADIGLAMGIAGTE
Sbjct: 747 TGDGTNDAPALHEADIGLAMGIAGTE 772
|
This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the translocation of calcium from the cytosol into small vacuoles. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 8 |
| >sp|Q2RAS0|ACA5_ORYSJ Probable calcium-transporting ATPase 5, plasma membrane-type OS=Oryza sativa subsp. japonica GN=Os11g0140400 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 796 bits (2057), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 399/567 (70%), Positives = 464/567 (81%), Gaps = 4/567 (0%)
Query: 1 MVTAISDYKQSLQFRDLDREKKKIFIQVTRDGQRQKVCTYDLVVGDIVHLSIGDQVPAYG 60
MVTA+SDYKQSLQF++LD EKKKIFI VTRDG+RQK+ YDLVVGDIVHLSIGDQVPA G
Sbjct: 193 MVTAVSDYKQSLQFKELDNEKKKIFIHVTRDGRRQKISIYDLVVGDIVHLSIGDQVPADG 252
Query: 61 IFISGHSLLIDESSLSGQSEPRYMYEENPFLLAGTKVQGGSGKMLVTTVGMRTEWGKLME 120
++I G+SLLIDESSLSG+S+P Y+ ++ PF+LAGTKVQ GS KM+VT VGMRTEWGKLM
Sbjct: 253 LYIHGYSLLIDESSLSGESDPVYVSQDKPFILAGTKVQDGSAKMIVTAVGMRTEWGKLMS 312
Query: 121 TLNEGGEDETPLQVKLNGVATIIGKIELFFSVLEFLVLIGRFLGEKVIHNEFTDWSSADA 180
TL+EGGEDETPLQVKLNGVAT+IGKI L F++L FLVL+ RFL +K + W S DA
Sbjct: 313 TLSEGGEDETPLQVKLNGVATVIGKIGLVFAILTFLVLLVRFLIDKGMTVGLLKWYSTDA 372
Query: 181 LTLIDYFAVVVTIIDVAVPEGLPLAVTLSLAFAMKKLMNDGALVRHLSACETMGSASCIC 240
LT+++YFA VTII VAVPEGLPLAVTLSLAFAMKKLMND ALVRHLSACETMGSA IC
Sbjct: 373 LTIVNYFATAVTIIVVAVPEGLPLAVTLSLAFAMKKLMNDKALVRHLSACETMGSAGTIC 432
Query: 241 TDKTRMLTTNHMVVDKIWIANTISNVEGNNRKDILQSEISERVLDITLQAIFQNTGSKVV 300
TDKT LTTN+MVVDKIWI+ +V N L S +S R L + LQ IF+NT ++VV
Sbjct: 433 TDKTGTLTTNYMVVDKIWISEVSKSVTSNTISGELNSVVSSRTLSLLLQGIFENTSAEVV 492
Query: 301 KDKDGKNSILGTPTESAILEFGLRLGGDFEAQRREFKIVKVEPFNSVRKKMSVLIALPAG 360
K+KDGK ++LGTPTE AILEFGL L G +A+ VKVEPFNSV+KKM+VLI+LP+G
Sbjct: 493 KEKDGKQTVLGTPTERAILEFGLGLEGVHDAEYSACTKVKVEPFNSVKKKMAVLISLPSG 552
Query: 361 GMRAFCKGASEIVLSMCDKVVSDNGEPVPLSEEQFRNITDVINGFASEALRTLCLAFKDL 420
R FCKGASEI+L MCD +V +G +PLSE Q +NI D IN FAS+ALRTLCLA+K++
Sbjct: 553 TSRWFCKGASEIILQMCDMMVDGDGNAIPLSEAQRKNILDTINSFASDALRTLCLAYKEV 612
Query: 421 NDSSNENNI-PDSGYTLIAVVGIKDPVRPGVKEAVQTCLEAGITVRMVTGDNINTARAIA 479
+D ++N P SG+TLIA+ GIKDPVRPGVK+AV+TC+ AGITVRMVTGDNINTA+AIA
Sbjct: 613 DDDIDDNADSPTSGFTLIAIFGIKDPVRPGVKDAVKTCMSAGITVRMVTGDNINTAKAIA 672
Query: 480 KECGILTSDGEAVEGPEFRNMSPA---DIIPKLQVMARSLPSDKHTLVTQLRNTFGEVVA 536
KECGILT DG A+EGPEF + SP D+IP +QVMARSLP DKHTLVT LR F EVV+
Sbjct: 673 KECGILTEDGVAIEGPEFHSKSPEEMRDLIPNIQVMARSLPLDKHTLVTNLRGMFDEVVS 732
Query: 537 VTGDGTNDASALHEADIGLAMGIAGTE 563
VTGDGTNDA ALHEADIGLAMGIAGTE
Sbjct: 733 VTGDGTNDAPALHEADIGLAMGIAGTE 759
|
This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the translocation of calcium from the cytosol out of the cell, into the endoplasmic reticulum, or into organelles. Oryza sativa subsp. japonica (taxid: 39947) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 8 |
| >sp|Q2QY12|ACA4_ORYSJ Probable calcium-transporting ATPase 4, plasma membrane-type OS=Oryza sativa subsp. japonica GN=Os12g0136900 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 784 bits (2025), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 400/567 (70%), Positives = 462/567 (81%), Gaps = 4/567 (0%)
Query: 1 MVTAISDYKQSLQFRDLDREKKKIFIQVTRDGQRQKVCTYDLVVGDIVHLSIGDQVPAYG 60
MVTA+SDYKQSLQF++LD EKKKIFI VTRDG+RQK+ YDLVVGDIVHLSIGDQVPA G
Sbjct: 215 MVTAVSDYKQSLQFKELDNEKKKIFIHVTRDGRRQKISIYDLVVGDIVHLSIGDQVPADG 274
Query: 61 IFISGHSLLIDESSLSGQSEPRYMYEENPFLLAGTKVQGGSGKMLVTTVGMRTEWGKLME 120
++I G+SLLIDESSLSG+S+P Y+ ++ PF+LAGTKVQ GS KM+VT VGMRTEWGKLM
Sbjct: 275 LYIHGYSLLIDESSLSGESDPVYVSQDKPFILAGTKVQDGSAKMIVTAVGMRTEWGKLMS 334
Query: 121 TLNEGGEDETPLQVKLNGVATIIGKIELFFSVLEFLVLIGRFLGEKVIHNEFTDWSSADA 180
TL+EGGEDETPLQVKLNGVATIIGKI L F++L FLVL+ RFL +K + W S DA
Sbjct: 335 TLSEGGEDETPLQVKLNGVATIIGKIGLVFAILTFLVLLVRFLIDKGMTVGLLKWYSTDA 394
Query: 181 LTLIDYFAVVVTIIDVAVPEGLPLAVTLSLAFAMKKLMNDGALVRHLSACETMGSASCIC 240
LT+++YFA VTII VAVPEGLPLAVTLSLAFAMKKLMND ALVRHLSACETMGSA IC
Sbjct: 395 LTIVNYFATAVTIIVVAVPEGLPLAVTLSLAFAMKKLMNDKALVRHLSACETMGSAGTIC 454
Query: 241 TDKTRMLTTNHMVVDKIWIANTISNVEGNNRKDILQSEISERVLDITLQAIFQNTGSKVV 300
TDKT LTTNHMVVDKIWI+ +V N L S +S L + LQ IF+NT ++VV
Sbjct: 455 TDKTGTLTTNHMVVDKIWISEVSKSVTSNTISGELNSVVSSSTLSLLLQGIFENTSAEVV 514
Query: 301 KDKDGKNSILGTPTESAILEFGLRLGGDFEAQRREFKIVKVEPFNSVRKKMSVLIALPAG 360
K+KDGK ++LGTPTE AILEFGL L GD +A+ R VKVEPFNSV+KKM+VLI+LP G
Sbjct: 515 KEKDGKQTVLGTPTERAILEFGLGLKGDHDAEYRACTKVKVEPFNSVKKKMAVLISLPNG 574
Query: 361 GMRAFCKGASEIVLSMCDKVVSDNGEPVPLSEEQFRNITDVINGFASEALRTLCLAFKDL 420
R FCKGASEI+L MCD +V +G +PLSE Q +NI D IN FAS+ALRTLCLA+K++
Sbjct: 575 TSRWFCKGASEIILQMCDMMVDGDGNAIPLSEAQRKNILDTINSFASDALRTLCLAYKEV 634
Query: 421 NDSSNENNI-PDSGYTLIAVVGIKDPVRPGVKEAVQTCLEAGITVRMVTGDNINTARAIA 479
+D ++N P SG+TLIA+ GIKDPVRPGVK+AV+TC+ AGITVRMVTGDNINTA+AIA
Sbjct: 635 DDDIDDNADSPTSGFTLIAIFGIKDPVRPGVKDAVKTCMSAGITVRMVTGDNINTAKAIA 694
Query: 480 KECGILTSDGEAVEGPEFRNMSPA---DIIPKLQVMARSLPSDKHTLVTQLRNTFGEVVA 536
KECGILT DG A+EGPEF + S D+I +QVMARSLP DKHTLVT LR F EVV+
Sbjct: 695 KECGILTEDGVAIEGPEFHSKSTEEMRDLILNIQVMARSLPLDKHTLVTNLRGMFDEVVS 754
Query: 537 VTGDGTNDASALHEADIGLAMGIAGTE 563
VTGDGTNDA ALHEADIGLAMGIAGTE
Sbjct: 755 VTGDGTNDAPALHEADIGLAMGIAGTE 781
|
This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the translocation of calcium from the cytosol out of the cell, into the endoplasmic reticulum, or into organelles. Oryza sativa subsp. japonica (taxid: 39947) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 8 |
| >sp|Q65X71|ACA6_ORYSJ Probable calcium-transporting ATPase 6, plasma membrane-type OS=Oryza sativa subsp. japonica GN=Os05g0495600 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 737 bits (1902), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 369/566 (65%), Positives = 447/566 (78%), Gaps = 5/566 (0%)
Query: 1 MVTAISDYKQSLQFRDLDREKKKIFIQVTRDGQRQKVCTYDLVVGDIVHLSIGDQVPAYG 60
+VTA SDY+Q+ +F +LDREK+KI+I+VTRD + ++V +DLVVGDI+HLSIGD VPA G
Sbjct: 200 LVTATSDYQQARKFMELDREKQKIYIRVTRDKKTKEVLVHDLVVGDILHLSIGDVVPADG 259
Query: 61 IFISGHSLLIDESSLSGQSEPRYMYEENPFLLAGTKVQGGSGKMLVTTVGMRTEWGKLME 120
+FISG L+IDESSLSG+SEP + EE PFL AG KV G+ KMLVT VG RTEWGK+M
Sbjct: 260 LFISGDCLMIDESSLSGESEPVNISEERPFLHAGNKVVDGAAKMLVTAVGTRTEWGKIMG 319
Query: 121 TLNEGGEDETPLQVKLNGVATIIGKIELFFSVLEFLVLIGRFLGEKVIHNEFTDWSSADA 180
TLN G DETPLQVKLNGVATIIG+I L F+VL FLVL+ RFL +K +H +WS+ DA
Sbjct: 320 TLNGDGVDETPLQVKLNGVATIIGQIGLVFAVLTFLVLLARFLADKGMHVGLLNWSANDA 379
Query: 181 LTLIDYFAVVVTIIDVAVPEGLPLAVTLSLAFAMKKLMNDGALVRHLSACETMGSASCIC 240
LT+++YFA+ VTII VAVPEGLPLAVTLSLAFAMKKLM+D ALVRHL+ACETMGSASCIC
Sbjct: 380 LTIVNYFAIAVTIIVVAVPEGLPLAVTLSLAFAMKKLMHDKALVRHLAACETMGSASCIC 439
Query: 241 TDKTRMLTTNHMVVDKIWIANTISNVEGNNRKDILQSEISERVLDITLQAIFQNTGSKVV 300
TDKT LTTNHM+VDK+WI + G+ + L+S ISERV+ I +Q IF NT S+VV
Sbjct: 440 TDKTGTLTTNHMIVDKVWIGDV--KFVGDKKNSELKSTISERVMAILIQGIFVNTASEVV 497
Query: 301 KDKDGKNSILGTPTESAILEFGLRLGGDFEAQRREFKIVKVEPFNSVRKKMSVLIALPAG 360
K DGKN+ILG TE+A+LEFGL L + +KV+PFNSV+KKMSV I LP G
Sbjct: 498 KGDDGKNTILGLATETALLEFGLSLEEHLYDDYNKLTRIKVDPFNSVKKKMSVTIQLPNG 557
Query: 361 GMRAFCKGASEIVLSMCDKVVSDNGEPVPLSEEQFRNITDVINGFASEALRTLCLAFKDL 420
G+R FCKGASEI+L C+ + + +G VPLSE Q N+ ++IN FASEALRTLC+AFKD+
Sbjct: 558 GIRTFCKGASEIILEQCNTIHNTDGNIVPLSEMQKHNVLNIINSFASEALRTLCIAFKDM 617
Query: 421 NDSSNENNIPDSGYTLIAVVGIKDPVRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAK 480
++ N+ I D GYTLIAV GIKDPVRPGVK+AV+TC+ AGI VRMVTGDNINTA+AIAK
Sbjct: 618 DEFPNDQPISDDGYTLIAVFGIKDPVRPGVKDAVRTCMAAGIRVRMVTGDNINTAKAIAK 677
Query: 481 ECGILTSDGEAVEGPEFRNMSP---ADIIPKLQVMARSLPSDKHTLVTQLRNTFGEVVAV 537
ECGILT DG A+EG + N S +++PK+QV+ARSLP DK+ LVT L++ + EVVAV
Sbjct: 678 ECGILTEDGIAIEGQQLNNKSSDELKELLPKIQVIARSLPMDKYKLVTSLKSMYQEVVAV 737
Query: 538 TGDGTNDASALHEADIGLAMGIAGTE 563
TGDGTNDA ALHE+DIGLAMGI GTE
Sbjct: 738 TGDGTNDAPALHESDIGLAMGITGTE 763
|
This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the translocation of calcium from the cytosol out of the cell, into the endoplasmic reticulum, or into organelles. Oryza sativa subsp. japonica (taxid: 39947) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 8 |
| >sp|O81108|ACA2_ARATH Calcium-transporting ATPase 2, plasma membrane-type OS=Arabidopsis thaliana GN=ACA2 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 726 bits (1873), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 373/568 (65%), Positives = 449/568 (79%), Gaps = 7/568 (1%)
Query: 1 MVTAISDYKQSLQFRDLDREKKKIFIQVTRDGQRQKVCTYDLVVGDIVHLSIGDQVPAYG 60
VTA SDY+QSLQFRDLD+EKKKI +QVTR+G RQK+ YDL+ GDIVHL+IGDQVPA G
Sbjct: 213 FVTATSDYRQSLQFRDLDKEKKKITVQVTRNGFRQKLSIYDLLPGDIVHLAIGDQVPADG 272
Query: 61 IFISGHSLLIDESSLSGQSEPRYMYEENPFLLAGTKVQGGSGKMLVTTVGMRTEWGKLME 120
+F+SG S++IDESSL+G+SEP + +NPFL++GTKVQ GS KM++TTVGMRT+WGKLM
Sbjct: 273 LFLSGFSVVIDESSLTGESEPVMVNAQNPFLMSGTKVQDGSCKMMITTVGMRTQWGKLMA 332
Query: 121 TLNEGGEDETPLQVKLNGVATIIGKIELFFSVLEFLVLIGRFLGEKVIHNEFTDWSSADA 180
TL EGG+DETPLQVKLNGVATIIGKI LFF+V+ F VL+ K+ WS +A
Sbjct: 333 TLTEGGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVLVQGMFMRKLSTGTHWVWSGDEA 392
Query: 181 LTLIDYFAVVVTIIDVAVPEGLPLAVTLSLAFAMKKLMNDGALVRHLSACETMGSASCIC 240
L L++YFA+ VTI+ VAVPEGLPLAVTLSLAFAMKK+MND ALVRHL+ACETMGSA+ IC
Sbjct: 393 LELLEYFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATTIC 452
Query: 241 TDKTRMLTTNHMVVDKIWIANTISNVEGNNRKDILQSEISERVLDITLQAIFQNTGSKVV 300
+DKT LTTNHM V K I + +V N+ LQSEI E + + +Q+IF NTG +VV
Sbjct: 453 SDKTGTLTTNHMTVVKSCICMNVQDVA--NKGSSLQSEIPESAVKLLIQSIFNNTGGEVV 510
Query: 301 KDKDGKNSILGTPTESAILEFGLRLGGDFEAQRREFKIVKVEPFNSVRKKMSVLIALPAG 360
+K GK +LGTPTE+AILE GL LGG F+ +R+ +K++KVEPFNS +K+M V+I LP G
Sbjct: 511 VNKHGKTELLGTPTETAILELGLSLGGKFQEERKSYKVIKVEPFNSTKKRMGVVIELPEG 570
Query: 361 G-MRAFCKGASEIVLSMCDKVVSDNGEPVPLSEEQFRNITDVINGFASEALRTLCLAFKD 419
G MRA KGASEIVL+ CDKVV+ +GE VPL EE + + IN FA+EALRTLCLA+ D
Sbjct: 571 GRMRAHTKGASEIVLAACDKVVNSSGEVVPLDEESIKYLNVTINEFANEALRTLCLAYMD 630
Query: 420 LNDS-SNENNIPDSGYTLIAVVGIKDPVRPGVKEAVQTCLEAGITVRMVTGDNINTARAI 478
+ S ++ IP SG+T + +VGIKDPVRPGVKE+V+ C AGITVRMVTGDNINTA+AI
Sbjct: 631 IEGGFSPDDAIPASGFTCVGIVGIKDPVRPGVKESVELCRRAGITVRMVTGDNINTAKAI 690
Query: 479 AKECGILTSDGEAVEGPEFRNMSPA---DIIPKLQVMARSLPSDKHTLVTQLRNTFGEVV 535
A+ECGILT DG A+EGP FR + ++IPK+QVMARS P DKHTLV QLR TF EVV
Sbjct: 691 ARECGILTDDGIAIEGPVFREKNQEELLELIPKIQVMARSSPMDKHTLVKQLRTTFDEVV 750
Query: 536 AVTGDGTNDASALHEADIGLAMGIAGTE 563
AVTGDGTNDA ALHEADIGLAMGIAGTE
Sbjct: 751 AVTGDGTNDAPALHEADIGLAMGIAGTE 778
|
This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the translocation of calcium from the cytosol into the endoplasmic reticulum. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 8 |
| >sp|Q2QMX9|ACA1_ORYSJ Calcium-transporting ATPase 1, plasma membrane-type OS=Oryza sativa subsp. japonica GN=Os12g0586600 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 723 bits (1866), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 370/567 (65%), Positives = 443/567 (78%), Gaps = 4/567 (0%)
Query: 1 MVTAISDYKQSLQFRDLDREKKKIFIQVTRDGQRQKVCTYDLVVGDIVHLSIGDQVPAYG 60
VTA SDY+QSLQF+DLD+EKKKI +QVTR+G RQ++ YDL+ GD+VHL+IGDQVPA G
Sbjct: 215 FVTATSDYRQSLQFKDLDKEKKKIQVQVTRNGFRQRLSIYDLLPGDVVHLAIGDQVPADG 274
Query: 61 IFISGHSLLIDESSLSGQSEPRYMYEENPFLLAGTKVQGGSGKMLVTTVGMRTEWGKLME 120
+FISG SLLI+ESSL+G+SEP + E+NPFLL+GTKVQ GS KML+TTVGMRT+WGKLM
Sbjct: 275 LFISGFSLLINESSLTGESEPVVVNEDNPFLLSGTKVQDGSCKMLITTVGMRTQWGKLMA 334
Query: 121 TLNEGGEDETPLQVKLNGVATIIGKIELFFSVLEFLVLIGRFLGEKVIHNEFTDWSSADA 180
TL+EGG+DETPLQVKLNGVATIIGKI LFF+V+ F+VL + +K WS DA
Sbjct: 335 TLSEGGDDETPLQVKLNGVATIIGKIGLFFAVITFIVLSQGLISKKYHEGLLLSWSGDDA 394
Query: 181 LTLIDYFAVVVTIIDVAVPEGLPLAVTLSLAFAMKKLMNDGALVRHLSACETMGSASCIC 240
L ++++FA+ VTI+ VAVPEGLPLAVTLSLAFAMKK+MND ALVRHL+ACETMGSA+ IC
Sbjct: 395 LEMLEHFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATTIC 454
Query: 241 TDKTRMLTTNHMVVDKIWIANTISNVEGNNRKDILQSEISERVLDITLQAIFQNTGSKVV 300
+DKT LTTNHM V K I I V L SE+ E V+ L++IF NTG +VV
Sbjct: 455 SDKTGTLTTNHMTVVKACICGNIKEVNNPKNASDLCSELPETVVKTLLESIFNNTGGEVV 514
Query: 301 KDKDGKNSILGTPTESAILEFGLRLGGDFEAQRREFKIVKVEPFNSVRKKMSVLIALPAG 360
D+DGK ILGTPTE+A+LEF L LGG+F+A+R E KIVK+EPFNS +K+M V++ LP G
Sbjct: 515 IDQDGKYQILGTPTETALLEFALSLGGNFKAKRDETKIVKMEPFNSTKKRMCVVLKLPGG 574
Query: 361 GMRAFCKGASEIVLSMCDKVVSDNGEPVPLSEEQFRNITDVINGFASEALRTLCLAFKDL 420
G RA CKGASEIVL+ CDK + + G VPL + + +I FA+EALRTLCL ++++
Sbjct: 575 GCRAHCKGASEIVLAACDKFMDETGAVVPLDKTTADKLNGIIESFANEALRTLCLGYREM 634
Query: 421 NDS-SNENNIPDSGYTLIAVVGIKDPVRPGVKEAVQTCLEAGITVRMVTGDNINTARAIA 479
+ S E IP GYT I +VGIKDPVRPGV+E+V TC AGI VRMVTGDNINTA+AIA
Sbjct: 635 EEGFSVEEQIPLQGYTCIGIVGIKDPVRPGVRESVATCRSAGIMVRMVTGDNINTAKAIA 694
Query: 480 KECGILTSDGEAVEGPEFRNMSPAD---IIPKLQVMARSLPSDKHTLVTQLRNTFGEVVA 536
+ECGILT DG A+EGPEFR S + +IPK+QVMARS P DKHTLV LR TF EVVA
Sbjct: 695 RECGILTEDGLAIEGPEFREKSLDELLKLIPKIQVMARSSPLDKHTLVKHLRTTFNEVVA 754
Query: 537 VTGDGTNDASALHEADIGLAMGIAGTE 563
VTGDGTNDA ALHEADIGLAMGIAGTE
Sbjct: 755 VTGDGTNDAPALHEADIGLAMGIAGTE 781
|
This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the translocation of calcium from the cytosol out of the cell, into the endoplasmic reticulum, or into organelles. Oryza sativa subsp. japonica (taxid: 39947) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 8 |
| >sp|O64806|ACA7_ARATH Putative calcium-transporting ATPase 7, plasma membrane-type OS=Arabidopsis thaliana GN=ACA7 PE=3 SV=2 | Back alignment and function description |
|---|
Score = 709 bits (1831), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 368/568 (64%), Positives = 445/568 (78%), Gaps = 7/568 (1%)
Query: 1 MVTAISDYKQSLQFRDLDREKKKIFIQVTRDGQRQKVCTYDLVVGDIVHLSIGDQVPAYG 60
VTA SDY+QSLQFRDLD+EKKKI +QVTR+G RQK+ YDL+ GD+VHL+IGDQVPA G
Sbjct: 214 FVTATSDYRQSLQFRDLDKEKKKITVQVTRNGFRQKMSIYDLLPGDVVHLAIGDQVPADG 273
Query: 61 IFISGHSLLIDESSLSGQSEPRYMYEENPFLLAGTKVQGGSGKMLVTTVGMRTEWGKLME 120
+F+SG S++IDESSL+G+SEP + +NPFLL+GTKVQ GS KMLVTTVGMRT+WGKLM
Sbjct: 274 LFLSGFSVVIDESSLTGESEPVMVTAQNPFLLSGTKVQDGSCKMLVTTVGMRTQWGKLMA 333
Query: 121 TLNEGGEDETPLQVKLNGVATIIGKIELFFSVLEFLVLIGRFLGEKVIHNEFTDWSSADA 180
TL+EGG+DETPLQVKLNGVATIIGKI L F+++ F VL+ K+ WS DA
Sbjct: 334 TLSEGGDDETPLQVKLNGVATIIGKIGLSFAIVTFAVLVQGMFMRKLSLGPHWWWSGDDA 393
Query: 181 LTLIDYFAVVVTIIDVAVPEGLPLAVTLSLAFAMKKLMNDGALVRHLSACETMGSASCIC 240
L L++YFA+ VTI+ VAVPEGLPLAVTLSLAFAMKK+MND ALVRHL+ACETMGSA+ IC
Sbjct: 394 LELLEYFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATTIC 453
Query: 241 TDKTRMLTTNHMVVDKIWIANTISNVEGNNRKDILQSEISERVLDITLQAIFQNTGSKVV 300
+DKT LTTNHM V K I + +V ++ LQS+I E L + LQ IF NTG +VV
Sbjct: 454 SDKTGTLTTNHMTVVKSCICMNVQDVA--SKSSSLQSDIPEAALKLLLQLIFNNTGGEVV 511
Query: 301 KDKDGKNSILGTPTESAILEFGLRLGGDFEAQRREFKIVKVEPFNSVRKKMSVLIALPAG 360
++ GK ILGTPTE+AILE GL LGG F+ +R+ K++KVEPFNS +K+M V+I LP G
Sbjct: 512 VNERGKTEILGTPTETAILELGLSLGGKFQEERQSNKVIKVEPFNSTKKRMGVVIELPEG 571
Query: 361 G-MRAFCKGASEIVLSMCDKVVSDNGEPVPLSEEQFRNITDVINGFASEALRTLCLAFKD 419
G +RA KGASEIVL+ CDKV++ +GE VPL +E + + I+ FA+EALRTLCLA+ D
Sbjct: 572 GRIRAHTKGASEIVLAACDKVINSSGEVVPLDDESIKFLNVTIDEFANEALRTLCLAYMD 631
Query: 420 LNDS-SNENNIPDSGYTLIAVVGIKDPVRPGVKEAVQTCLEAGITVRMVTGDNINTARAI 478
+ S + IP+ G+T I +VGIKDPVRPGV+E+V+ C AGI VRMVTGDNINTA+AI
Sbjct: 632 IESGFSADEGIPEKGFTCIGIVGIKDPVRPGVRESVELCRRAGIMVRMVTGDNINTAKAI 691
Query: 479 AKECGILTSDGEAVEGPEFRNMSPA---DIIPKLQVMARSLPSDKHTLVTQLRNTFGEVV 535
A+ECGILT DG A+EGP FR + ++IPK+QVMARS P DKHTLV QLR TF EVV
Sbjct: 692 ARECGILTDDGIAIEGPVFREKNQEEMLELIPKIQVMARSSPMDKHTLVKQLRTTFDEVV 751
Query: 536 AVTGDGTNDASALHEADIGLAMGIAGTE 563
AVTGDGTNDA ALHEADIGLAMGIAGTE
Sbjct: 752 AVTGDGTNDAPALHEADIGLAMGIAGTE 779
|
This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the translocation of calcium from the cytosol out of the cell or into organelles. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 8 |
| >sp|Q37145|ACA1_ARATH Calcium-transporting ATPase 1, chloroplastic OS=Arabidopsis thaliana GN=ACA1 PE=1 SV=3 | Back alignment and function description |
|---|
Score = 701 bits (1810), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 364/567 (64%), Positives = 434/567 (76%), Gaps = 4/567 (0%)
Query: 1 MVTAISDYKQSLQFRDLDREKKKIFIQVTRDGQRQKVCTYDLVVGDIVHLSIGDQVPAYG 60
VTA SDY+QSLQF+DLD EKKKI +QVTRD RQK+ YDL+ GD+VHL IGDQ+PA G
Sbjct: 215 FVTATSDYRQSLQFKDLDAEKKKIVVQVTRDKLRQKISIYDLLPGDVVHLGIGDQIPADG 274
Query: 61 IFISGHSLLIDESSLSGQSEPRYMYEENPFLLAGTKVQGGSGKMLVTTVGMRTEWGKLME 120
+FISG S+LI+ESSL+G+SEP + E+PFLL+GTKVQ GS KMLVTTVGMRT+WGKLM
Sbjct: 275 LFISGFSVLINESSLTGESEPVSVSVEHPFLLSGTKVQDGSCKMLVTTVGMRTQWGKLMA 334
Query: 121 TLNEGGEDETPLQVKLNGVATIIGKIELFFSVLEFLVLIGRFLGEKVIHNEFTDWSSADA 180
TL+EGG+DETPLQVKLNGVATIIGKI LFF+V+ F VL+ +K + N W++ +
Sbjct: 335 TLSEGGDDETPLQVKLNGVATIIGKIGLFFAVITFAVLVQGLANQKRLDNSHWIWTADEL 394
Query: 181 LTLIDYFAVVVTIIDVAVPEGLPLAVTLSLAFAMKKLMNDGALVRHLSACETMGSASCIC 240
+ +++YFAV VTI+ VAVPEGLPLAVTLSLAFAMKK+MND ALVR+L+ACETMGSA+ IC
Sbjct: 395 MAMLEYFAVAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRNLAACETMGSATTIC 454
Query: 241 TDKTRMLTTNHMVVDKIWIANTISNVEGNNRKDILQSEISERVLDITLQAIFQNTGSKVV 300
+DKT LTTNHM V K I V G + S I E + + LQ+IF NTG ++V
Sbjct: 455 SDKTGTLTTNHMTVVKACICEQAKEVNGPDAAMKFASGIPESAVKLLLQSIFTNTGGEIV 514
Query: 301 KDKDGKNSILGTPTESAILEFGLRLGGDFEAQRREFKIVKVEPFNSVRKKMSVLIALPAG 360
K K ILGTPTE+A+LEFGL LGGDF+ R+ +VKVEPFNS +K+M V+I LP
Sbjct: 515 VGKGNKTEILGTPTETALLEFGLSLGGDFQEVRQASNVVKVEPFNSTKKRMGVVIELPER 574
Query: 361 GMRAFCKGASEIVLSMCDKVVSDNGEPVPLSEEQFRNITDVINGFASEALRTLCLAFKDL 420
RA CKGASEIVL CDK ++ +GE VPL E+ ++ ++I FASEALRTLCLA+ ++
Sbjct: 575 HFRAHCKGASEIVLDSCDKYINKDGEVVPLDEKSTSHLKNIIEEFASEALRTLCLAYFEI 634
Query: 421 NDS-SNENNIPDSGYTLIAVVGIKDPVRPGVKEAVQTCLEAGITVRMVTGDNINTARAIA 479
D S E IP GYT I +VGIKDPVRPGVKE+V C AGITVRMVTGDN+ TA+AIA
Sbjct: 635 GDEFSLEAPIPSGGYTCIGIVGIKDPVRPGVKESVAICKSAGITVRMVTGDNLTTAKAIA 694
Query: 480 KECGILTSDGEAVEGPEFRNMSPAD---IIPKLQVMARSLPSDKHTLVTQLRNTFGEVVA 536
+ECGILT DG A+EGPEFR S + +IPKLQVMARS P DKHTLV LR F EVVA
Sbjct: 695 RECGILTDDGIAIEGPEFREKSDEELLKLIPKLQVMARSSPMDKHTLVRLLRTMFQEVVA 754
Query: 537 VTGDGTNDASALHEADIGLAMGIAGTE 563
VTGDGTNDA ALHEADIGLAMGI+GTE
Sbjct: 755 VTGDGTNDAPALHEADIGLAMGISGTE 781
|
This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the translocation of calcium from the cytosol out of the cell or into organelles. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 8 |
| >sp|Q8RUN1|ACA3_ORYSJ Calcium-transporting ATPase 3, plasma membrane-type OS=Oryza sativa subsp. japonica GN=Os01g0939100 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 699 bits (1804), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 375/572 (65%), Positives = 440/572 (76%), Gaps = 14/572 (2%)
Query: 1 MVTAISDYKQSLQFRDLDREKKKIFIQVTRDGQRQKVCTYDLVVGDIVHLSIGDQVPAYG 60
M+TA SDYKQSLQFRDLD+EKKKI +QVTRDG RQKV YD+VVGDIVHLSIGDQVPA G
Sbjct: 218 MITAASDYKQSLQFRDLDKEKKKIDVQVTRDGYRQKVSIYDIVVGDIVHLSIGDQVPADG 277
Query: 61 IFISGHSLLIDESSLSGQSEPRYMYEENPFLLAGTKVQGGSGKMLVTTVGMRTEWGKLME 120
+FI G+S ++DES+LSG+SEP ++ N FLL GTKVQ GS +MLVT VGMRTEWG LME
Sbjct: 278 LFIDGYSFVVDESNLSGESEPVHVSTANRFLLGGTKVQDGSARMLVTAVGMRTEWGNLME 337
Query: 121 TLNEGGEDETPLQVKLNGVATIIGKIELFFSVLEFLVLIGRF-LGEKVIHNEFTDWSSAD 179
TL++GGEDETPLQVKLNGVATIIGKI L F+VL F VL+ RF LG+ W D
Sbjct: 338 TLSQGGEDETPLQVKLNGVATIIGKIGLAFAVLTFTVLMARFLLGKAGAPGGLLRWRMVD 397
Query: 180 ALTLIDYFAVVVTIIDVAVPEGLPLAVTLSLAFAMKKLMNDGALVRHLSACETMGSASCI 239
AL ++++FAV VTII VAVPEGLPLAVTLSLAFAMKKLM + ALVRHLSACETMGSASCI
Sbjct: 398 ALAVLNFFAVAVTIIVVAVPEGLPLAVTLSLAFAMKKLMQERALVRHLSACETMGSASCI 457
Query: 240 CTDKTRMLTTNHMVVDKIW---IANTISNVEGNNRKDILQSEISERVLDITLQAIFQNTG 296
CTDKT LTTNHMVV+KIW A T+SN +G D L S +SE + L+ +F +G
Sbjct: 458 CTDKTGTLTTNHMVVEKIWASGAAQTMSNAKGF---DQLTSSMSETFAKVLLEGVFHCSG 514
Query: 297 SKVVKDKDGKNSILGTPTESAILEFGLRLGGDFEAQRREFKIVKVEPFNSVRKKMSVLIA 356
S+VV+ KDG+++I+GTPTE+AILEFGL + + +KVEPFNSV+K M+V+IA
Sbjct: 515 SEVVRGKDGRHTIMGTPTETAILEFGLAVEKRARIEHTGAGKLKVEPFNSVKKTMAVVIA 574
Query: 357 LPAGG--MRAFCKGASEIVLSMCDKVVSDNGEPVPLSEEQFRNITDVINGFASEALRTLC 414
P+ G RAF KGASE+VLS C V+ G L++ + + + I+ FA EALRTLC
Sbjct: 575 SPSAGGRPRAFLKGASEVVLSRCSLVLDGTGNVEKLTDAKAKRVASAIDAFACEALRTLC 634
Query: 415 LAFKDLNDSSNENNIPDSGYTLIAVVGIKDPVRPGVKEAVQTCLEAGITVRMVTGDNINT 474
LA++D++ + GYTLIAV GIKDP+RPGV+EAV TC AGI VRMVTGDNINT
Sbjct: 635 LAYQDVDGGGGDIPG--EGYTLIAVFGIKDPLRPGVREAVATCHAAGINVRMVTGDNINT 692
Query: 475 ARAIAKECGILTSDGEAVEGPEFRNMSP---ADIIPKLQVMARSLPSDKHTLVTQLRNTF 531
A+AIA+ECGILT DG A+EGPEFRN P +IIPK+QVMARSLP DKHTLVT LR F
Sbjct: 693 AKAIARECGILTDDGIAIEGPEFRNKDPDQMREIIPKIQVMARSLPLDKHTLVTNLRGMF 752
Query: 532 GEVVAVTGDGTNDASALHEADIGLAMGIAGTE 563
EVVAVTGDGTNDA ALHEADIGLAMGIAGTE
Sbjct: 753 NEVVAVTGDGTNDAPALHEADIGLAMGIAGTE 784
|
This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the translocation of calcium from the cytosol out of the cell, into the endoplasmic reticulum, or into organelles. Oryza sativa subsp. japonica (taxid: 39947) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 8 |
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 563 | ||||||
| 225449945 | 1036 | PREDICTED: putative calcium-transporting | 0.998 | 0.542 | 0.766 | 0.0 | |
| 147774146 | 999 | hypothetical protein VITISV_007276 [Viti | 0.998 | 0.562 | 0.766 | 0.0 | |
| 225449943 | 1047 | PREDICTED: putative calcium-transporting | 0.998 | 0.536 | 0.766 | 0.0 | |
| 224137802 | 1030 | autoinhibited calcium ATPase [Populus tr | 1.0 | 0.546 | 0.770 | 0.0 | |
| 356534694 | 1035 | PREDICTED: calcium-transporting ATPase 4 | 1.0 | 0.543 | 0.752 | 0.0 | |
| 225441902 | 1032 | PREDICTED: calcium-transporting ATPase 4 | 1.0 | 0.545 | 0.782 | 0.0 | |
| 225441900 | 1033 | PREDICTED: calcium-transporting ATPase 4 | 1.0 | 0.545 | 0.782 | 0.0 | |
| 224086938 | 1039 | autoinhibited calcium ATPase [Populus tr | 1.0 | 0.541 | 0.754 | 0.0 | |
| 18483249 | 1037 | type IIB calcium ATPase [Medicago trunca | 1.0 | 0.542 | 0.746 | 0.0 | |
| 147819471 | 1018 | hypothetical protein VITISV_024946 [Viti | 1.0 | 0.553 | 0.782 | 0.0 |
| >gi|225449945|ref|XP_002270669.1| PREDICTED: putative calcium-transporting ATPase 11, plasma membrane-type isoform 1 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 882 bits (2279), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 434/566 (76%), Positives = 493/566 (87%), Gaps = 4/566 (0%)
Query: 1 MVTAISDYKQSLQFRDLDREKKKIFIQVTRDGQRQKVCTYDLVVGDIVHLSIGDQVPAYG 60
MVTA SDYKQSLQF+DLD+EKK I +QVTRDG RQK+ YDLVVGDIVHLSIGDQVPA G
Sbjct: 211 MVTATSDYKQSLQFKDLDKEKKNIIVQVTRDGYRQKISIYDLVVGDIVHLSIGDQVPADG 270
Query: 61 IFISGHSLLIDESSLSGQSEPRYMYEENPFLLAGTKVQGGSGKMLVTTVGMRTEWGKLME 120
+FISGHSL IDESSLSG+SEP + ++ PFLL+GTKVQ GSGKMLVT+VGMRTEWG+LM
Sbjct: 271 VFISGHSLSIDESSLSGESEPVNINKQRPFLLSGTKVQDGSGKMLVTSVGMRTEWGRLMV 330
Query: 121 TLNEGGEDETPLQVKLNGVATIIGKIELFFSVLEFLVLIGRFLGEKVIHNEFTDWSSADA 180
TL+EGGEDETPLQVKLNGVATIIGKI L F+VL FLVL+GRFL +K +H+ TDWS +DA
Sbjct: 331 TLSEGGEDETPLQVKLNGVATIIGKIGLAFAVLTFLVLMGRFLLQKALHSNITDWSFSDA 390
Query: 181 LTLIDYFAVVVTIIDVAVPEGLPLAVTLSLAFAMKKLMNDGALVRHLSACETMGSASCIC 240
+T+++YFA+ VTII VAVPEGLPLAVTLSLAFAMKKLMN ALVRHLSACETMGSASCIC
Sbjct: 391 VTILNYFAIAVTIIVVAVPEGLPLAVTLSLAFAMKKLMNAKALVRHLSACETMGSASCIC 450
Query: 241 TDKTRMLTTNHMVVDKIWIANTISNVEGNNRKDILQSEISERVLDITLQAIFQNTGSKVV 300
TDKT LTTNHMVV+KIWI +E N+ KD+ QS I E+V I LQ+IFQNTGS+VV
Sbjct: 451 TDKTGTLTTNHMVVNKIWICEKSKAIETNDSKDVFQSLIPEKVYSILLQSIFQNTGSEVV 510
Query: 301 KDKDGKNSILGTPTESAILEFGLRLGGDFEAQRREFKIVKVEPFNSVRKKMSVLIALPAG 360
K KDGK S+LGTPTE+AILEFGL LGG+ A +E +IVKVEPFNSV+KKMSVL++LPAG
Sbjct: 511 KGKDGKVSVLGTPTETAILEFGLHLGGE-SAHYKESEIVKVEPFNSVKKKMSVLVSLPAG 569
Query: 361 GMRAFCKGASEIVLSMCDKVVSDNGEPVPLSEEQFRNITDVINGFASEALRTLCLAFKDL 420
G RAFCKGASEIVL MCDK+++ NGE V LS +Q +NITDVINGFA EALRTLCLAFKD+
Sbjct: 570 GFRAFCKGASEIVLEMCDKIINTNGEFVSLSADQRKNITDVINGFACEALRTLCLAFKDI 629
Query: 421 NDSSNENNIPDSGYTLIAVVGIKDPVRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAK 480
+SS +++IP S YTLIAV+GIKDPVRPGVK+AV+TCL AGITVRMVTGDNINTA+AIAK
Sbjct: 630 ENSSKDDDIPYSNYTLIAVLGIKDPVRPGVKDAVRTCLAAGITVRMVTGDNINTAKAIAK 689
Query: 481 ECGILTSDGEAVEGPEFRNMSP---ADIIPKLQVMARSLPSDKHTLVTQLRNTFGEVVAV 537
ECGILT DG A+EGP+FRN SP ++IPKLQVMARSLP DKHTLV+QLRN+F EVVAV
Sbjct: 690 ECGILTDDGLAIEGPDFRNKSPQEMKELIPKLQVMARSLPLDKHTLVSQLRNSFKEVVAV 749
Query: 538 TGDGTNDASALHEADIGLAMGIAGTE 563
TGDGTNDA ALHEADIGLAMGIAGTE
Sbjct: 750 TGDGTNDAPALHEADIGLAMGIAGTE 775
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|147774146|emb|CAN76950.1| hypothetical protein VITISV_007276 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 882 bits (2278), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 434/566 (76%), Positives = 493/566 (87%), Gaps = 4/566 (0%)
Query: 1 MVTAISDYKQSLQFRDLDREKKKIFIQVTRDGQRQKVCTYDLVVGDIVHLSIGDQVPAYG 60
MVTA SDYKQSLQF+DLD+EKK I +QVTRDG RQK+ YDLVVGDIVHLSIGDQVPA G
Sbjct: 211 MVTATSDYKQSLQFKDLDKEKKNIIVQVTRDGYRQKISIYDLVVGDIVHLSIGDQVPADG 270
Query: 61 IFISGHSLLIDESSLSGQSEPRYMYEENPFLLAGTKVQGGSGKMLVTTVGMRTEWGKLME 120
+FISGHSL IDESSLSG+SEP + ++ PFLL+GTKVQ GSGKMLVT+VGMRTEWG+LM
Sbjct: 271 VFISGHSLSIDESSLSGESEPVNINKQRPFLLSGTKVQDGSGKMLVTSVGMRTEWGRLMV 330
Query: 121 TLNEGGEDETPLQVKLNGVATIIGKIELFFSVLEFLVLIGRFLGEKVIHNEFTDWSSADA 180
TL+EGGEDETPLQVKLNGVATIIGKI L F+VL FLVL+GRFL +K +H+ TDWS +DA
Sbjct: 331 TLSEGGEDETPLQVKLNGVATIIGKIGLAFAVLTFLVLMGRFLLQKALHSNITDWSFSDA 390
Query: 181 LTLIDYFAVVVTIIDVAVPEGLPLAVTLSLAFAMKKLMNDGALVRHLSACETMGSASCIC 240
+T+++YFA+ VTII VAVPEGLPLAVTLSLAFAMKKLMN ALVRHLSACETMGSASCIC
Sbjct: 391 VTILNYFAIAVTIIVVAVPEGLPLAVTLSLAFAMKKLMNAKALVRHLSACETMGSASCIC 450
Query: 241 TDKTRMLTTNHMVVDKIWIANTISNVEGNNRKDILQSEISERVLDITLQAIFQNTGSKVV 300
TDKT LTTNHMVV+KIWI +E N+ KD+ QS I E+V I LQ+IFQNTGS+VV
Sbjct: 451 TDKTGTLTTNHMVVNKIWICEKSKAIETNDSKDVFQSLIPEKVYSILLQSIFQNTGSEVV 510
Query: 301 KDKDGKNSILGTPTESAILEFGLRLGGDFEAQRREFKIVKVEPFNSVRKKMSVLIALPAG 360
K KDGK S+LGTPTE+AILEFGL LGG+ A +E +IVKVEPFNSV+KKMSVL++LPAG
Sbjct: 511 KGKDGKVSVLGTPTETAILEFGLHLGGE-SAHYKESEIVKVEPFNSVKKKMSVLVSLPAG 569
Query: 361 GMRAFCKGASEIVLSMCDKVVSDNGEPVPLSEEQFRNITDVINGFASEALRTLCLAFKDL 420
G RAFCKGASEIVL MCDK+++ NGE V LS +Q +NITDVINGFA EALRTLCLAFKD+
Sbjct: 570 GFRAFCKGASEIVLEMCDKIINTNGEFVSLSADQRKNITDVINGFACEALRTLCLAFKDI 629
Query: 421 NDSSNENNIPDSGYTLIAVVGIKDPVRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAK 480
+SS +++IP S YTLIAV+GIKDPVRPGVK+AV+TCL AGITVRMVTGDNINTA+AIAK
Sbjct: 630 ENSSKDDDIPYSNYTLIAVLGIKDPVRPGVKDAVRTCLAAGITVRMVTGDNINTAKAIAK 689
Query: 481 ECGILTSDGEAVEGPEFRNMSP---ADIIPKLQVMARSLPSDKHTLVTQLRNTFGEVVAV 537
ECGILT DG A+EGP+FRN SP ++IPKLQVMARSLP DKHTLV+QLRN+F EVVAV
Sbjct: 690 ECGILTDDGLAIEGPDFRNKSPQEMKELIPKLQVMARSLPLDKHTLVSQLRNSFKEVVAV 749
Query: 538 TGDGTNDASALHEADIGLAMGIAGTE 563
TGDGTNDA ALHEADIGLAMGIAGTE
Sbjct: 750 TGDGTNDAPALHEADIGLAMGIAGTE 775
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225449943|ref|XP_002270771.1| PREDICTED: putative calcium-transporting ATPase 11, plasma membrane-type isoform 2 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 881 bits (2277), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 434/566 (76%), Positives = 493/566 (87%), Gaps = 4/566 (0%)
Query: 1 MVTAISDYKQSLQFRDLDREKKKIFIQVTRDGQRQKVCTYDLVVGDIVHLSIGDQVPAYG 60
MVTA SDYKQSLQF+DLD+EKK I +QVTRDG RQK+ YDLVVGDIVHLSIGDQVPA G
Sbjct: 222 MVTATSDYKQSLQFKDLDKEKKNIIVQVTRDGYRQKISIYDLVVGDIVHLSIGDQVPADG 281
Query: 61 IFISGHSLLIDESSLSGQSEPRYMYEENPFLLAGTKVQGGSGKMLVTTVGMRTEWGKLME 120
+FISGHSL IDESSLSG+SEP + ++ PFLL+GTKVQ GSGKMLVT+VGMRTEWG+LM
Sbjct: 282 VFISGHSLSIDESSLSGESEPVNINKQRPFLLSGTKVQDGSGKMLVTSVGMRTEWGRLMV 341
Query: 121 TLNEGGEDETPLQVKLNGVATIIGKIELFFSVLEFLVLIGRFLGEKVIHNEFTDWSSADA 180
TL+EGGEDETPLQVKLNGVATIIGKI L F+VL FLVL+GRFL +K +H+ TDWS +DA
Sbjct: 342 TLSEGGEDETPLQVKLNGVATIIGKIGLAFAVLTFLVLMGRFLLQKALHSNITDWSFSDA 401
Query: 181 LTLIDYFAVVVTIIDVAVPEGLPLAVTLSLAFAMKKLMNDGALVRHLSACETMGSASCIC 240
+T+++YFA+ VTII VAVPEGLPLAVTLSLAFAMKKLMN ALVRHLSACETMGSASCIC
Sbjct: 402 VTILNYFAIAVTIIVVAVPEGLPLAVTLSLAFAMKKLMNAKALVRHLSACETMGSASCIC 461
Query: 241 TDKTRMLTTNHMVVDKIWIANTISNVEGNNRKDILQSEISERVLDITLQAIFQNTGSKVV 300
TDKT LTTNHMVV+KIWI +E N+ KD+ QS I E+V I LQ+IFQNTGS+VV
Sbjct: 462 TDKTGTLTTNHMVVNKIWICEKSKAIETNDSKDVFQSLIPEKVYSILLQSIFQNTGSEVV 521
Query: 301 KDKDGKNSILGTPTESAILEFGLRLGGDFEAQRREFKIVKVEPFNSVRKKMSVLIALPAG 360
K KDGK S+LGTPTE+AILEFGL LGG+ A +E +IVKVEPFNSV+KKMSVL++LPAG
Sbjct: 522 KGKDGKVSVLGTPTETAILEFGLHLGGE-SAHYKESEIVKVEPFNSVKKKMSVLVSLPAG 580
Query: 361 GMRAFCKGASEIVLSMCDKVVSDNGEPVPLSEEQFRNITDVINGFASEALRTLCLAFKDL 420
G RAFCKGASEIVL MCDK+++ NGE V LS +Q +NITDVINGFA EALRTLCLAFKD+
Sbjct: 581 GFRAFCKGASEIVLEMCDKIINTNGEFVSLSADQRKNITDVINGFACEALRTLCLAFKDI 640
Query: 421 NDSSNENNIPDSGYTLIAVVGIKDPVRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAK 480
+SS +++IP S YTLIAV+GIKDPVRPGVK+AV+TCL AGITVRMVTGDNINTA+AIAK
Sbjct: 641 ENSSKDDDIPYSNYTLIAVLGIKDPVRPGVKDAVRTCLAAGITVRMVTGDNINTAKAIAK 700
Query: 481 ECGILTSDGEAVEGPEFRNMSP---ADIIPKLQVMARSLPSDKHTLVTQLRNTFGEVVAV 537
ECGILT DG A+EGP+FRN SP ++IPKLQVMARSLP DKHTLV+QLRN+F EVVAV
Sbjct: 701 ECGILTDDGLAIEGPDFRNKSPQEMKELIPKLQVMARSLPLDKHTLVSQLRNSFKEVVAV 760
Query: 538 TGDGTNDASALHEADIGLAMGIAGTE 563
TGDGTNDA ALHEADIGLAMGIAGTE
Sbjct: 761 TGDGTNDAPALHEADIGLAMGIAGTE 786
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224137802|ref|XP_002322655.1| autoinhibited calcium ATPase [Populus trichocarpa] gi|222867285|gb|EEF04416.1| autoinhibited calcium ATPase [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 879 bits (2271), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 436/566 (77%), Positives = 491/566 (86%), Gaps = 3/566 (0%)
Query: 1 MVTAISDYKQSLQFRDLDREKKKIFIQVTRDGQRQKVCTYDLVVGDIVHLSIGDQVPAYG 60
MVTAISDY QSLQFRDLDREKKKI IQV RDG+RQ++ YDLVVGD+V LSIGD VPA G
Sbjct: 208 MVTAISDYNQSLQFRDLDREKKKISIQVIRDGRRQEISIYDLVVGDVVQLSIGDIVPADG 267
Query: 61 IFISGHSLLIDESSLSGQSEPRYMYEENPFLLAGTKVQGGSGKMLVTTVGMRTEWGKLME 120
I+ISG+SL+IDESSLSG+SEP +YE PFLL+GTKVQ GSGKM+VT VGMRTEWGKLME
Sbjct: 268 IYISGYSLVIDESSLSGESEPVNIYESKPFLLSGTKVQDGSGKMIVTAVGMRTEWGKLME 327
Query: 121 TLNEGGEDETPLQVKLNGVATIIGKIELFFSVLEFLVLIGRFLGEKVIHNEFTDWSSADA 180
TLNEGGEDETPLQVKLNGVATIIGKI L F+VL FLVL GRFL EK IH EFTDWSS+DA
Sbjct: 328 TLNEGGEDETPLQVKLNGVATIIGKIGLAFAVLTFLVLTGRFLVEKAIHKEFTDWSSSDA 387
Query: 181 LTLIDYFAVVVTIIDVAVPEGLPLAVTLSLAFAMKKLMNDGALVRHLSACETMGSASCIC 240
LTL++YFA+ VTII VAVPEGLPLAVTLSLAFAMKKLM++ ALVRHLSACETMGSA+CIC
Sbjct: 388 LTLLNYFAIAVTIIVVAVPEGLPLAVTLSLAFAMKKLMDEKALVRHLSACETMGSATCIC 447
Query: 241 TDKTRMLTTNHMVVDKIWIANTISNVEGNNRKDILQSEISERVLDITLQAIFQNTGSKVV 300
TDKT LTTNHMVVDKIWI I +++ +N + IL+ EISE VL + Q IFQNT ++
Sbjct: 448 TDKTGTLTTNHMVVDKIWICEKIEDIKCSNSESILEMEISESVLSLLFQVIFQNTACEIS 507
Query: 301 KDKDGKNSILGTPTESAILEFGLRLGGDFEAQRREFKIVKVEPFNSVRKKMSVLIALPAG 360
KD++GKN ILGTPTE A+ E GL LGGDF++QR+EF+++ VEPFNSVRKKMSVL+ALP G
Sbjct: 508 KDENGKNKILGTPTEKALFELGLLLGGDFDSQRKEFQMLNVEPFNSVRKKMSVLVALPGG 567
Query: 361 GMRAFCKGASEIVLSMCDKVVSDNGEPVPLSEEQFRNITDVINGFASEALRTLCLAFKDL 420
+RAFCKGASEIVL MCDK++ D+G+ VPLSEEQ N +DVIN FAS+ALRTLCLA+KDL
Sbjct: 568 ELRAFCKGASEIVLKMCDKILDDSGKVVPLSEEQILNTSDVINSFASDALRTLCLAYKDL 627
Query: 421 NDSSNENNIPDSGYTLIAVVGIKDPVRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAK 480
+D E +IPD GYTL+AVVGIKDPVRPGVK+AVQTCL AGITVRMVTGDNINTA+AIAK
Sbjct: 628 DDPVYEGSIPDFGYTLVAVVGIKDPVRPGVKDAVQTCLAAGITVRMVTGDNINTAKAIAK 687
Query: 481 ECGILTSDGEAVEGPEFRNMSPA---DIIPKLQVMARSLPSDKHTLVTQLRNTFGEVVAV 537
ECGILT DG A+EGPEFR MSP +IIPK+QVMARSLP DKHTLVT L+N F EVVAV
Sbjct: 688 ECGILTEDGVAIEGPEFRIMSPQQMREIIPKIQVMARSLPLDKHTLVTNLKNMFKEVVAV 747
Query: 538 TGDGTNDASALHEADIGLAMGIAGTE 563
TGDGTNDA ALHEADIGLAMGIAGTE
Sbjct: 748 TGDGTNDAPALHEADIGLAMGIAGTE 773
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356534694|ref|XP_003535887.1| PREDICTED: calcium-transporting ATPase 4, plasma membrane-type-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 871 bits (2250), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 426/566 (75%), Positives = 489/566 (86%), Gaps = 3/566 (0%)
Query: 1 MVTAISDYKQSLQFRDLDREKKKIFIQVTRDGQRQKVCTYDLVVGDIVHLSIGDQVPAYG 60
+VTAISDY+QSLQFRDLD+EKKKIF+QVTRD +RQKV YDLVVGDIVHLS GDQVPA G
Sbjct: 212 IVTAISDYQQSLQFRDLDKEKKKIFVQVTRDRKRQKVSIYDLVVGDIVHLSTGDQVPADG 271
Query: 61 IFISGHSLLIDESSLSGQSEPRYMYEENPFLLAGTKVQGGSGKMLVTTVGMRTEWGKLME 120
I+ISG+SL+IDESSL+G+SEP + EE PFLL+GTKVQ G GKM+VTTVGMRTEWGKLME
Sbjct: 272 IYISGYSLVIDESSLTGESEPVNIDEERPFLLSGTKVQDGQGKMIVTTVGMRTEWGKLME 331
Query: 121 TLNEGGEDETPLQVKLNGVATIIGKIELFFSVLEFLVLIGRFLGEKVIHNEFTDWSSADA 180
TL+EGGEDETPLQVKLNGVAT+IGKI L FSVL F+VL RF+ EK + EF WSS DA
Sbjct: 332 TLSEGGEDETPLQVKLNGVATVIGKIGLTFSVLTFVVLTIRFVVEKAVRGEFASWSSNDA 391
Query: 181 LTLIDYFAVVVTIIDVAVPEGLPLAVTLSLAFAMKKLMNDGALVRHLSACETMGSASCIC 240
L L+DYFA+ VTII VA+PEGLPLAVTLSLAFAMKKLM D ALVRHLSACETMGSA+CIC
Sbjct: 392 LKLLDYFAIAVTIIVVAIPEGLPLAVTLSLAFAMKKLMKDKALVRHLSACETMGSATCIC 451
Query: 241 TDKTRMLTTNHMVVDKIWIANTISNVEGNNRKDILQSEISERVLDITLQAIFQNTGSKVV 300
TDKT LTTNHMVV+KIWI I+ ++GN D L++EISE VL I L++IFQNT S+VV
Sbjct: 452 TDKTGTLTTNHMVVNKIWICGKINEIKGNESIDKLKTEISEEVLSILLRSIFQNTSSEVV 511
Query: 301 KDKDGKNSILGTPTESAILEFGLRLGGDFEAQRREFKIVKVEPFNSVRKKMSVLIALPAG 360
KDKDGK +ILGTPTESA+LEFGL GGDFEAQR +KI+KV PFNSVRKKMSVL+ LP G
Sbjct: 512 KDKDGKTTILGTPTESALLEFGLLAGGDFEAQRGTYKILKVVPFNSVRKKMSVLVGLPDG 571
Query: 361 GMRAFCKGASEIVLSMCDKVVSDNGEPVPLSEEQFRNITDVINGFASEALRTLCLAFKDL 420
G++AFCKGASEIVL +C+KV+ NG V LS+EQ + ++D+INGFA+EALRTLCLA KD+
Sbjct: 572 GVQAFCKGASEIVLKLCNKVIDPNGTAVDLSDEQAKKVSDIINGFANEALRTLCLALKDV 631
Query: 421 NDSSNENNIPDSGYTLIAVVGIKDPVRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAK 480
N + E++IP+ YTLIA+VGIKDPVRPGV+EAV+TCL AGITVRMVTGDNINTARAIA+
Sbjct: 632 NGTQGESSIPEDSYTLIAIVGIKDPVRPGVREAVKTCLAAGITVRMVTGDNINTARAIAR 691
Query: 481 ECGILTSDGEAVEGPEFRNMSP---ADIIPKLQVMARSLPSDKHTLVTQLRNTFGEVVAV 537
ECGILT DG A+EGP FR++S IIP++QVMARSLP DKHTLVT+LRN FGEVVAV
Sbjct: 692 ECGILTEDGVAIEGPHFRDLSTEQMKSIIPRIQVMARSLPLDKHTLVTRLRNMFGEVVAV 751
Query: 538 TGDGTNDASALHEADIGLAMGIAGTE 563
TGDGTNDA ALHE+DIGLAMGIAGTE
Sbjct: 752 TGDGTNDAPALHESDIGLAMGIAGTE 777
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225441902|ref|XP_002284422.1| PREDICTED: calcium-transporting ATPase 4, plasma membrane-type isoform 2 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 868 bits (2244), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 443/566 (78%), Positives = 498/566 (87%), Gaps = 3/566 (0%)
Query: 1 MVTAISDYKQSLQFRDLDREKKKIFIQVTRDGQRQKVCTYDLVVGDIVHLSIGDQVPAYG 60
+VTAISDY+QSLQFRDLD+EKKKIF+QVTRDG RQK+ YDLVVGDIVHLSIGDQVPA G
Sbjct: 210 LVTAISDYRQSLQFRDLDKEKKKIFVQVTRDGYRQKISIYDLVVGDIVHLSIGDQVPADG 269
Query: 61 IFISGHSLLIDESSLSGQSEPRYMYEENPFLLAGTKVQGGSGKMLVTTVGMRTEWGKLME 120
+FISG+SLLIDES +SG+SEP ++ EE PF L+GTKV GSGKMLVTTVGMRTEWGKLME
Sbjct: 270 VFISGYSLLIDESGMSGESEPVHISEEKPFFLSGTKVTDGSGKMLVTTVGMRTEWGKLME 329
Query: 121 TLNEGGEDETPLQVKLNGVATIIGKIELFFSVLEFLVLIGRFLGEKVIHNEFTDWSSADA 180
TL EGG+DETPLQVKLNGVATIIGKI L F+VL F+VL+ RFL EK + EFTDWSS+DA
Sbjct: 330 TLTEGGDDETPLQVKLNGVATIIGKIGLAFAVLTFVVLVVRFLVEKALRKEFTDWSSSDA 389
Query: 181 LTLIDYFAVVVTIIDVAVPEGLPLAVTLSLAFAMKKLMNDGALVRHLSACETMGSASCIC 240
LTL++YFA+ VTII VAVPEGLPLAVTLSLAFAMKKLM + ALVRHLSACETMGSASCIC
Sbjct: 390 LTLLNYFAIAVTIIVVAVPEGLPLAVTLSLAFAMKKLMKEKALVRHLSACETMGSASCIC 449
Query: 241 TDKTRMLTTNHMVVDKIWIANTISNVEGNNRKDILQSEISERVLDITLQAIFQNTGSKVV 300
TDKT LTTNHMVV KIWI ++G+ D+L+SEIS RV I LQAIFQNT S+VV
Sbjct: 450 TDKTGTLTTNHMVVHKIWICGKAEEIKGSESADVLKSEISGRVSSILLQAIFQNTSSEVV 509
Query: 301 KDKDGKNSILGTPTESAILEFGLRLGGDFEAQRREFKIVKVEPFNSVRKKMSVLIALPAG 360
KDKDGKN+ILGTPTESA+LEFGL LGG+F+AQR+E KIV+VEPFNSV+KKMSVL+ALP G
Sbjct: 510 KDKDGKNTILGTPTESALLEFGLLLGGNFDAQRKENKIVEVEPFNSVKKKMSVLVALPDG 569
Query: 361 GMRAFCKGASEIVLSMCDKVVSDNGEPVPLSEEQFRNITDVINGFASEALRTLCLAFKDL 420
+RAFCKGASEI+LSMC+K+V+ +GE +PLSE Q RNITD+INGFASEALRTLCLAFKD+
Sbjct: 570 RIRAFCKGASEIILSMCNKIVNYDGESIPLSEVQERNITDIINGFASEALRTLCLAFKDV 629
Query: 421 NDSSNENNIPDSGYTLIAVVGIKDPVRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAK 480
+D SNEN+IP GYTLI VVGIKDP RPGVK+AVQTCL AGI VRMVTGDNINTA+AIAK
Sbjct: 630 DDPSNENDIPTYGYTLIMVVGIKDPTRPGVKDAVQTCLAAGIAVRMVTGDNINTAKAIAK 689
Query: 481 ECGILTSDGEAVEGPEFRNMS---PADIIPKLQVMARSLPSDKHTLVTQLRNTFGEVVAV 537
ECGILT DG A+EGPEF +MS +IIP++QVMARSLPSDKHTLVT LR +GEVVAV
Sbjct: 690 ECGILTEDGLAIEGPEFHSMSLEEMREIIPRIQVMARSLPSDKHTLVTHLRKLYGEVVAV 749
Query: 538 TGDGTNDASALHEADIGLAMGIAGTE 563
TGDGTNDA ALHEADIGLAMGIAGTE
Sbjct: 750 TGDGTNDAPALHEADIGLAMGIAGTE 775
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225441900|ref|XP_002284417.1| PREDICTED: calcium-transporting ATPase 4, plasma membrane-type isoform 1 [Vitis vinifera] gi|297739623|emb|CBI29805.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 868 bits (2243), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 443/566 (78%), Positives = 498/566 (87%), Gaps = 3/566 (0%)
Query: 1 MVTAISDYKQSLQFRDLDREKKKIFIQVTRDGQRQKVCTYDLVVGDIVHLSIGDQVPAYG 60
+VTAISDY+QSLQFRDLD+EKKKIF+QVTRDG RQK+ YDLVVGDIVHLSIGDQVPA G
Sbjct: 211 LVTAISDYRQSLQFRDLDKEKKKIFVQVTRDGYRQKISIYDLVVGDIVHLSIGDQVPADG 270
Query: 61 IFISGHSLLIDESSLSGQSEPRYMYEENPFLLAGTKVQGGSGKMLVTTVGMRTEWGKLME 120
+FISG+SLLIDES +SG+SEP ++ EE PF L+GTKV GSGKMLVTTVGMRTEWGKLME
Sbjct: 271 VFISGYSLLIDESGMSGESEPVHISEEKPFFLSGTKVTDGSGKMLVTTVGMRTEWGKLME 330
Query: 121 TLNEGGEDETPLQVKLNGVATIIGKIELFFSVLEFLVLIGRFLGEKVIHNEFTDWSSADA 180
TL EGG+DETPLQVKLNGVATIIGKI L F+VL F+VL+ RFL EK + EFTDWSS+DA
Sbjct: 331 TLTEGGDDETPLQVKLNGVATIIGKIGLAFAVLTFVVLVVRFLVEKALRKEFTDWSSSDA 390
Query: 181 LTLIDYFAVVVTIIDVAVPEGLPLAVTLSLAFAMKKLMNDGALVRHLSACETMGSASCIC 240
LTL++YFA+ VTII VAVPEGLPLAVTLSLAFAMKKLM + ALVRHLSACETMGSASCIC
Sbjct: 391 LTLLNYFAIAVTIIVVAVPEGLPLAVTLSLAFAMKKLMKEKALVRHLSACETMGSASCIC 450
Query: 241 TDKTRMLTTNHMVVDKIWIANTISNVEGNNRKDILQSEISERVLDITLQAIFQNTGSKVV 300
TDKT LTTNHMVV KIWI ++G+ D+L+SEIS RV I LQAIFQNT S+VV
Sbjct: 451 TDKTGTLTTNHMVVHKIWICGKAEEIKGSESADVLKSEISGRVSSILLQAIFQNTSSEVV 510
Query: 301 KDKDGKNSILGTPTESAILEFGLRLGGDFEAQRREFKIVKVEPFNSVRKKMSVLIALPAG 360
KDKDGKN+ILGTPTESA+LEFGL LGG+F+AQR+E KIV+VEPFNSV+KKMSVL+ALP G
Sbjct: 511 KDKDGKNTILGTPTESALLEFGLLLGGNFDAQRKENKIVEVEPFNSVKKKMSVLVALPDG 570
Query: 361 GMRAFCKGASEIVLSMCDKVVSDNGEPVPLSEEQFRNITDVINGFASEALRTLCLAFKDL 420
+RAFCKGASEI+LSMC+K+V+ +GE +PLSE Q RNITD+INGFASEALRTLCLAFKD+
Sbjct: 571 RIRAFCKGASEIILSMCNKIVNYDGESIPLSEVQERNITDIINGFASEALRTLCLAFKDV 630
Query: 421 NDSSNENNIPDSGYTLIAVVGIKDPVRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAK 480
+D SNEN+IP GYTLI VVGIKDP RPGVK+AVQTCL AGI VRMVTGDNINTA+AIAK
Sbjct: 631 DDPSNENDIPTYGYTLIMVVGIKDPTRPGVKDAVQTCLAAGIAVRMVTGDNINTAKAIAK 690
Query: 481 ECGILTSDGEAVEGPEFRNMS---PADIIPKLQVMARSLPSDKHTLVTQLRNTFGEVVAV 537
ECGILT DG A+EGPEF +MS +IIP++QVMARSLPSDKHTLVT LR +GEVVAV
Sbjct: 691 ECGILTEDGLAIEGPEFHSMSLEEMREIIPRIQVMARSLPSDKHTLVTHLRKLYGEVVAV 750
Query: 538 TGDGTNDASALHEADIGLAMGIAGTE 563
TGDGTNDA ALHEADIGLAMGIAGTE
Sbjct: 751 TGDGTNDAPALHEADIGLAMGIAGTE 776
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224086938|ref|XP_002308011.1| autoinhibited calcium ATPase [Populus trichocarpa] gi|222853987|gb|EEE91534.1| autoinhibited calcium ATPase [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 868 bits (2242), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 427/566 (75%), Positives = 486/566 (85%), Gaps = 3/566 (0%)
Query: 1 MVTAISDYKQSLQFRDLDREKKKIFIQVTRDGQRQKVCTYDLVVGDIVHLSIGDQVPAYG 60
MVTA SDY QSLQFRDLDREKKKI IQVTRDG++Q++ YDLVVGD+V LSIGD VPA G
Sbjct: 217 MVTAASDYNQSLQFRDLDREKKKISIQVTRDGRKQEISIYDLVVGDVVQLSIGDIVPADG 276
Query: 61 IFISGHSLLIDESSLSGQSEPRYMYEENPFLLAGTKVQGGSGKMLVTTVGMRTEWGKLME 120
I+ISG+SL+IDESSLSG+SEP +YE P LL+GTKVQ GSGKM+VT VGMRTEWGKLME
Sbjct: 277 IYISGYSLVIDESSLSGESEPVNVYENKPLLLSGTKVQDGSGKMIVTAVGMRTEWGKLME 336
Query: 121 TLNEGGEDETPLQVKLNGVATIIGKIELFFSVLEFLVLIGRFLGEKVIHNEFTDWSSADA 180
TL+EGGEDETPLQVKLNGVAT+IGKI L F+VL FLVL RFL EK + +EFTDWSS+DA
Sbjct: 337 TLSEGGEDETPLQVKLNGVATVIGKIGLAFAVLTFLVLTVRFLVEKALRHEFTDWSSSDA 396
Query: 181 LTLIDYFAVVVTIIDVAVPEGLPLAVTLSLAFAMKKLMNDGALVRHLSACETMGSASCIC 240
+TL++YFA+ VTII VAVPEGLPLAVTLSLAFAMKKLMN+ ALVRHLSACETMGSA+CIC
Sbjct: 397 MTLLNYFAIAVTIIVVAVPEGLPLAVTLSLAFAMKKLMNEKALVRHLSACETMGSATCIC 456
Query: 241 TDKTRMLTTNHMVVDKIWIANTISNVEGNNRKDILQSEISERVLDITLQAIFQNTGSKVV 300
TDKT LTTN MVVDKIWI ++ + + IL+ ISE VL++ Q IFQNT +
Sbjct: 457 TDKTGTLTTNCMVVDKIWIRGKTEVIKSRHSEGILEMGISEGVLNLLFQVIFQNTACETS 516
Query: 301 KDKDGKNSILGTPTESAILEFGLRLGGDFEAQRREFKIVKVEPFNSVRKKMSVLIALPAG 360
KD++GKN ILGTPTE A+ EFGL LGGDF+AQR++F+I+KVEPFNSVRKKMSVL+ALP+G
Sbjct: 517 KDENGKNKILGTPTEKALFEFGLLLGGDFDAQRKDFQIMKVEPFNSVRKKMSVLVALPSG 576
Query: 361 GMRAFCKGASEIVLSMCDKVVSDNGEPVPLSEEQFRNITDVINGFASEALRTLCLAFKDL 420
+RAFCKGASEIVL MCDK + D+G+ VPLSEEQ +I+DVINGFASEALRTLCLAFKDL
Sbjct: 577 ELRAFCKGASEIVLKMCDKFLDDSGKSVPLSEEQILSISDVINGFASEALRTLCLAFKDL 636
Query: 421 NDSSNENNIPDSGYTLIAVVGIKDPVRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAK 480
+D + E +IPD GYTL+ VVGIKDPVRPGVK+AVQTCL AGITVRMVTGDNINTA+AIAK
Sbjct: 637 DDPAYEGSIPDFGYTLVTVVGIKDPVRPGVKDAVQTCLAAGITVRMVTGDNINTAKAIAK 696
Query: 481 ECGILTSDGEAVEGPEFRNMSPADI---IPKLQVMARSLPSDKHTLVTQLRNTFGEVVAV 537
ECGILT G A+EGPEFR M+P + IPK+QVMARSLP DKHTLVT LRN F EVVAV
Sbjct: 697 ECGILTEGGLAIEGPEFRIMNPQQMRENIPKIQVMARSLPLDKHTLVTNLRNMFKEVVAV 756
Query: 538 TGDGTNDASALHEADIGLAMGIAGTE 563
TGDGTNDA ALHEADIGL+MGIAGTE
Sbjct: 757 TGDGTNDAPALHEADIGLSMGIAGTE 782
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|18483249|gb|AAL73984.1|AF466149_1 type IIB calcium ATPase [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Score = 867 bits (2241), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 424/568 (74%), Positives = 489/568 (86%), Gaps = 5/568 (0%)
Query: 1 MVTAISDYKQSLQFRDLDREKKKIFIQVTRDGQRQKVCTYDLVVGDIVHLSIGDQVPAYG 60
+VTA+SDY+QSLQF DLDREKKKIF+QV RDG+R+K+ YD+VVGDI+HLS GDQVPA G
Sbjct: 211 IVTAVSDYRQSLQFMDLDREKKKIFVQVNRDGKRKKISIYDVVVGDIIHLSTGDQVPADG 270
Query: 61 IFISGHSLLIDESSLSGQSEPRYMYEENPFLLAGTKVQGGSGKMLVTTVGMRTEWGKLME 120
I+ISG+SLLIDESSLSG+SEP ++ EE+PFLL+GTKVQ G GKMLVTTVGMRTEWGKLME
Sbjct: 271 IYISGYSLLIDESSLSGESEPVFITEEHPFLLSGTKVQDGQGKMLVTTVGMRTEWGKLME 330
Query: 121 TLNEGGEDETPLQVKLNGVATIIGKIELFFSVLEFLVLIGRFLGEKVIHNEFTDWSSADA 180
TLNEGGEDETPLQVKLNGVATIIGKI LFF+++ FLVL RFL EK +H EF +WSS DA
Sbjct: 331 TLNEGGEDETPLQVKLNGVATIIGKIGLFFAIVTFLVLTVRFLVEKALHGEFGNWSSNDA 390
Query: 181 LTLIDYFAVVVTIIDVAVPEGLPLAVTLSLAFAMKKLMNDGALVRHLSACETMGSASCIC 240
L+D+FA+ VTII VAVPEGLPLAVTLSLAFAMKKLMND ALVRHLSACETMGSASCIC
Sbjct: 391 TKLLDFFAIAVTIIVVAVPEGLPLAVTLSLAFAMKKLMNDMALVRHLSACETMGSASCIC 450
Query: 241 TDKTRMLTTNHMVVDKIWIANTISNVEGNNRKDILQSEISERVLDITLQAIFQNTGSKVV 300
TDKT LTTNHMVV+KIWI + ++G+ D L++ ISE VL I LQAIFQNT ++VV
Sbjct: 451 TDKTGTLTTNHMVVNKIWICENTTQLKGDESADELKTNISEGVLSILLQAIFQNTSAEVV 510
Query: 301 KDKDGKNSILGTPTESAILEFGLRLGGDFEAQR--REFKIVKVEPFNSVRKKMSVLIALP 358
KDK+GKN+ILG+PTESA+LEFGL LG +F+A+ + +KI+K+EPFNSVRKKMSVL+ LP
Sbjct: 511 KDKNGKNTILGSPTESALLEFGLLLGSEFDARNHSKAYKILKLEPFNSVRKKMSVLVGLP 570
Query: 359 AGGMRAFCKGASEIVLSMCDKVVSDNGEPVPLSEEQFRNITDVINGFASEALRTLCLAFK 418
G ++AFCKGASEI+L MCDK++ NGE V L ++ ++DVIN FASEALRTLCLA +
Sbjct: 571 NGRVQAFCKGASEIILEMCDKMIDCNGEVVDLPADRANIVSDVINSFASEALRTLCLAVR 630
Query: 419 DLNDSSNENNIPDSGYTLIAVVGIKDPVRPGVKEAVQTCLEAGITVRMVTGDNINTARAI 478
D+N++ E NIPDSGYTLIA+VGIKDPVRPGVKEAVQTC+ AGITVRMVTGDNINTA+AI
Sbjct: 631 DINETQGETNIPDSGYTLIALVGIKDPVRPGVKEAVQTCIAAGITVRMVTGDNINTAKAI 690
Query: 479 AKECGILTSDGEAVEGPEFRNMSP---ADIIPKLQVMARSLPSDKHTLVTQLRNTFGEVV 535
AKECGILT DG A+EGP FR +S DIIP++QVMARSLP DKH LVT LRN FGEVV
Sbjct: 691 AKECGILTDDGVAIEGPSFRELSDEQMKDIIPRIQVMARSLPLDKHKLVTNLRNMFGEVV 750
Query: 536 AVTGDGTNDASALHEADIGLAMGIAGTE 563
AVTGDGTNDA ALHEADIGLAMGIAGTE
Sbjct: 751 AVTGDGTNDAPALHEADIGLAMGIAGTE 778
|
Source: Medicago truncatula Species: Medicago truncatula Genus: Medicago Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|147819471|emb|CAN61103.1| hypothetical protein VITISV_024946 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 867 bits (2240), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 443/566 (78%), Positives = 498/566 (87%), Gaps = 3/566 (0%)
Query: 1 MVTAISDYKQSLQFRDLDREKKKIFIQVTRDGQRQKVCTYDLVVGDIVHLSIGDQVPAYG 60
+VTAISDY+QSLQFRDLD+EKKKIF+QVTRDG RQK+ YDLVVGDIVHLSIGDQVPA G
Sbjct: 154 LVTAISDYRQSLQFRDLDKEKKKIFVQVTRDGYRQKISIYDLVVGDIVHLSIGDQVPADG 213
Query: 61 IFISGHSLLIDESSLSGQSEPRYMYEENPFLLAGTKVQGGSGKMLVTTVGMRTEWGKLME 120
+FISG+SLLIDES +SG+SEP ++ EE PF L+GTKV GSGKMLVTTVGMRTEWGKLME
Sbjct: 214 VFISGYSLLIDESGMSGESEPVHISEEKPFFLSGTKVTDGSGKMLVTTVGMRTEWGKLME 273
Query: 121 TLNEGGEDETPLQVKLNGVATIIGKIELFFSVLEFLVLIGRFLGEKVIHNEFTDWSSADA 180
TL EGG+DETPLQVKLNGVATIIGKI L F+VL F+VL+ RFL EK + EFTDWSS+DA
Sbjct: 274 TLTEGGDDETPLQVKLNGVATIIGKIGLAFAVLTFVVLVVRFLVEKALRKEFTDWSSSDA 333
Query: 181 LTLIDYFAVVVTIIDVAVPEGLPLAVTLSLAFAMKKLMNDGALVRHLSACETMGSASCIC 240
LTL++YFA+ VTII VAVPEGLPLAVTLSLAFAMKKLM + ALVRHLSACETMGSASCIC
Sbjct: 334 LTLLNYFAIAVTIIVVAVPEGLPLAVTLSLAFAMKKLMKEKALVRHLSACETMGSASCIC 393
Query: 241 TDKTRMLTTNHMVVDKIWIANTISNVEGNNRKDILQSEISERVLDITLQAIFQNTGSKVV 300
TDKT LTTNHMVV KIWI ++G+ D+L+SEIS RV I LQAIFQNT S+VV
Sbjct: 394 TDKTGTLTTNHMVVHKIWICGKAEEIKGSESADVLKSEISGRVSSILLQAIFQNTSSEVV 453
Query: 301 KDKDGKNSILGTPTESAILEFGLRLGGDFEAQRREFKIVKVEPFNSVRKKMSVLIALPAG 360
KDKDGKN+ILGTPTESA+LEFGL LGG+F+AQR+E KIV+VEPFNSV+KKMSVL+ALP G
Sbjct: 454 KDKDGKNTILGTPTESALLEFGLLLGGNFDAQRKENKIVEVEPFNSVKKKMSVLVALPDG 513
Query: 361 GMRAFCKGASEIVLSMCDKVVSDNGEPVPLSEEQFRNITDVINGFASEALRTLCLAFKDL 420
+RAFCKGASEI+LSMC+K+V+ +GE +PLSE Q RNITD+INGFASEALRTLCLAFKD+
Sbjct: 514 RIRAFCKGASEIILSMCNKIVNYDGESIPLSEVQERNITDIINGFASEALRTLCLAFKDV 573
Query: 421 NDSSNENNIPDSGYTLIAVVGIKDPVRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAK 480
+D SNEN+IP GYTLI VVGIKDP RPGVK+AVQTCL AGI VRMVTGDNINTA+AIAK
Sbjct: 574 DDPSNENDIPTYGYTLIMVVGIKDPTRPGVKDAVQTCLAAGIAVRMVTGDNINTAKAIAK 633
Query: 481 ECGILTSDGEAVEGPEFRNMS---PADIIPKLQVMARSLPSDKHTLVTQLRNTFGEVVAV 537
ECGILT DG A+EGPEF +MS +IIP++QVMARSLPSDKHTLVT LR +GEVVAV
Sbjct: 634 ECGILTEDGLAIEGPEFHSMSLEEMREIIPRIQVMARSLPSDKHTLVTHLRKLYGEVVAV 693
Query: 538 TGDGTNDASALHEADIGLAMGIAGTE 563
TGDGTNDA ALHEADIGLAMGIAGTE
Sbjct: 694 TGDGTNDAPALHEADIGLAMGIAGTE 719
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 563 | ||||||
| TAIR|locus:2062673 | 1030 | ACA4 ""autoinhibited Ca(2+)-AT | 0.992 | 0.542 | 0.726 | 1e-212 | |
| TAIR|locus:2082528 | 1025 | ACA11 "autoinhibited Ca2+-ATPa | 0.989 | 0.543 | 0.722 | 5.7e-210 | |
| TAIR|locus:2120096 | 1014 | ACA2 "calcium ATPase 2" [Arabi | 0.992 | 0.551 | 0.647 | 3.8e-188 | |
| TAIR|locus:2059201 | 1015 | ACA7 "auto-regulated Ca2+-ATPa | 0.992 | 0.550 | 0.642 | 1.7e-185 | |
| TAIR|locus:2029794 | 1020 | ACA1 "autoinhibited Ca2+-ATPas | 0.998 | 0.550 | 0.630 | 1.8e-181 | |
| TAIR|locus:2175579 | 1074 | ACA8 ""autoinhibited Ca2+ -ATP | 0.980 | 0.513 | 0.468 | 3.5e-123 | |
| TAIR|locus:2094726 | 1086 | ACA9 "autoinhibited Ca(2+)-ATP | 0.982 | 0.509 | 0.449 | 5e-115 | |
| TAIR|locus:2087363 | 1033 | AT3G63380 [Arabidopsis thalian | 0.978 | 0.533 | 0.441 | 1.3e-114 | |
| DICTYBASE|DDB_G0289473 | 1077 | DDB_G0289473 "Ca2+-ATPase" [Di | 0.536 | 0.280 | 0.447 | 1.9e-107 | |
| UNIPROTKB|F1PHQ7 | 1206 | ATP2B4 "Uncharacterized protei | 0.648 | 0.302 | 0.440 | 2.1e-107 |
| TAIR|locus:2062673 ACA4 ""autoinhibited Ca(2+)-ATPase, isoform 4"" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2056 (728.8 bits), Expect = 1.0e-212, P = 1.0e-212
Identities = 412/567 (72%), Positives = 468/567 (82%)
Query: 1 MVTAISDYKQSLQFRDLDREKKKIFIQVTRDGQRQKVCTYDLVVGDIVHLSIGDQVPAYG 60
MVTAISDYKQSLQFRDLDREKKKI +QVTRDG RQ++ +DLVVGD+VHLSIGDQVPA G
Sbjct: 210 MVTAISDYKQSLQFRDLDREKKKIIVQVTRDGSRQEISIHDLVVGDVVHLSIGDQVPADG 269
Query: 61 IFISGHSLLIDESSLSGQSEPRYMYEENPFLLAGTKVQGGSGKMLVTTVGMRTEWGKLME 120
IFISG++L IDESSLSG+SEP ++ +E PFLL+GTKVQ GS KMLVTTVGMRTEWGKLME
Sbjct: 270 IFISGYNLEIDESSLSGESEPSHVNKEKPFLLSGTKVQNGSAKMLVTTVGMRTEWGKLME 329
Query: 121 TLNEGGEDETPLQVKLNGVATIIGKIXXXXXXXXXXXXIGRFLGEKVIHNEFTDWSSADA 180
TL +GGEDETPLQVKLNGVATIIGKI RF+ +K FT+WSS DA
Sbjct: 330 TLVDGGEDETPLQVKLNGVATIIGKIGLSFAVLTFVVLCIRFVLDKATSGSFTNWSSEDA 389
Query: 181 LTLIDYFAVVVTIIDVAVPEGLPLAVTLSLAFAMKKLMNDGALVRHLSACETMGSASCIC 240
LTL+DYFA+ VTII VAVPEGLPLAVTLSLAFAMKKLM+D ALVRHL+ACETMGS++CIC
Sbjct: 390 LTLLDYFAISVTIIVVAVPEGLPLAVTLSLAFAMKKLMSDRALVRHLAACETMGSSTCIC 449
Query: 241 TDKTRMLTTNHMVVDKIWIANTISN-VEGNNRKDILQSEISERVLDITLQAIFQNTGSKV 299
TDKT LTTNHMVV+K+WI + + EG+ K+ + E+SE V LQ IFQNTGS+V
Sbjct: 450 TDKTGTLTTNHMVVNKVWICDKVQERQEGS--KESFELELSEEVQSTLLQGIFQNTGSEV 507
Query: 300 VKDKDGKNSILGTPTESAILEFGLRLGGDFEAQRREFKIVKVEPFNSVRKKMSVLIALPA 359
VKDKDG ILG+PTE AILEFGL LGGDF QR+E KI+K+EPFNS +KKMSVLIALP
Sbjct: 508 VKDKDGNTQILGSPTERAILEFGLLLGGDFNTQRKEHKILKIEPFNSDKKKMSVLIALPG 567
Query: 360 GGMRAFCKGASEIVLSMCDKVVSDNGEPVPLSEEQFRNITDVINGFASEALRTLCLAFKD 419
GG RAFCKGASEIVL MC+ VV NGE VPL+EE+ +I+D+I GFASEALRTLCL +KD
Sbjct: 568 GGARAFCKGASEIVLKMCENVVDSNGESVPLTEERITSISDIIEGFASEALRTLCLVYKD 627
Query: 420 LNDSSNENNIPDSGYTLIAVVGIKDPVRPGVKEAVQTCLEAGITVRMVTGDNINTARAIA 479
L D + +PD GYT++AVVGIKDPVRPGV+EAVQTC AGITVRMVTGDNI+TA+AIA
Sbjct: 628 L-DEAPSGELPDGGYTMVAVVGIKDPVRPGVREAVQTCQAAGITVRMVTGDNISTAKAIA 686
Query: 480 KECGILTSDGEAVEGPEFRNMSPAD---IIPKLQVMARSLPSDKHTLVTQLRNTFGEVVA 536
KECGI T G A+EG EFR++SP + IIPK+QVMARSLP DKHTLV+ LR GEVVA
Sbjct: 687 KECGIYTEGGLAIEGSEFRDLSPHEMRAIIPKIQVMARSLPLDKHTLVSNLRK-IGEVVA 745
Query: 537 VTGDGTNDASALHEADIGLAMGIAGTE 563
VTGDGTNDA ALHEADIGLAMGIAGTE
Sbjct: 746 VTGDGTNDAPALHEADIGLAMGIAGTE 772
|
|
| TAIR|locus:2082528 ACA11 "autoinhibited Ca2+-ATPase 11" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2030 (719.7 bits), Expect = 5.7e-210, P = 5.7e-210
Identities = 409/566 (72%), Positives = 466/566 (82%)
Query: 1 MVTAISDYKQSLQFRDLDREKKKIFIQVTRDGQRQKVCTYDLVVGDIVHLSIGDQVPAYG 60
MVTAISDYKQSLQFRDLDREKKKI IQVTRDG RQ+V +DLVVGD+VHLSIGDQVPA G
Sbjct: 210 MVTAISDYKQSLQFRDLDREKKKIIIQVTRDGSRQEVSIHDLVVGDVVHLSIGDQVPADG 269
Query: 61 IFISGHSLLIDESSLSGQSEPRYMYEENPFLLAGTKVQGGSGKMLVTTVGMRTEWGKLME 120
IFISG++L IDESSLSG+SEP ++ +E PFLL+GTKVQ GS KMLVTTVGMRTEWGKLM+
Sbjct: 270 IFISGYNLEIDESSLSGESEPSHVNKEKPFLLSGTKVQNGSAKMLVTTVGMRTEWGKLMD 329
Query: 121 TLNEGGEDETPLQVKLNGVATIIGKIXXXXXXXXXXXXIGRFLGEKVIHNEFTDWSSADA 180
TL+EGGEDETPLQVKLNGVATIIGKI RF+ EK T+WSS DA
Sbjct: 330 TLSEGGEDETPLQVKLNGVATIIGKIGLGFAVLTFVVLCIRFVVEKATAGSITEWSSEDA 389
Query: 181 LTLIDYFAVVVTIIDVAVPEGLPLAVTLSLAFAMKKLMNDGALVRHLSACETMGSASCIC 240
LTL+DYFA+ VTII VAVPEGLPLAVTLSLAFAMK+LM+D ALVRHL+ACETMGS++CIC
Sbjct: 390 LTLLDYFAIAVTIIVVAVPEGLPLAVTLSLAFAMKQLMSDRALVRHLAACETMGSSTCIC 449
Query: 241 TDKTRMLTTNHMVVDKIWIANTISNVEGNNRKDILQSEISERVLDITLQAIFQNTGSKVV 300
TDKT LTTNHMVV+K+WI I + N Q +SE+V +I +QAIFQNTGS+VV
Sbjct: 450 TDKTGTLTTNHMVVNKVWICENIKERQEEN----FQLNLSEQVKNILIQAIFQNTGSEVV 505
Query: 301 KDKDGKNSILGTPTESAILEFGLRLGGDFEAQRREFKIVKVEPFNSVRKKMSVLIALPAG 360
KDK+GK ILG+PTE AILEFGL LGGD + QRRE KI+K+EPFNS +KKMSVL + G
Sbjct: 506 KDKEGKTQILGSPTERAILEFGLLLGGDVDTQRREHKILKIEPFNSDKKKMSVLTSHSGG 565
Query: 361 GMRAFCKGASEIVLSMCDKVVSDNGEPVPLSEEQFRNITDVINGFASEALRTLCLAFKDL 420
+RAFCKGASEIVL MC+KVV NGE VPLSEE+ +I+DVI GFASEALRTLCL + DL
Sbjct: 566 KVRAFCKGASEIVLKMCEKVVDSNGESVPLSEEKIASISDVIEGFASEALRTLCLVYTDL 625
Query: 421 NDSSNENNIPDSGYTLIAVVGIKDPVRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAK 480
D + ++P+ GYTL+AVVGIKDPVRPGV+EAVQTC AGITVRMVTGDNI+TA+AIAK
Sbjct: 626 -DEAPRGDLPNGGYTLVAVVGIKDPVRPGVREAVQTCQAAGITVRMVTGDNISTAKAIAK 684
Query: 481 ECGILTSDGEAVEGPEFRNMSPAD---IIPKLQVMARSLPSDKHTLVTQLRNTFGEVVAV 537
ECGILT+ G A+EG +FRN+ P + I+PK+QVMARSLP DKHTLV LR GEVVAV
Sbjct: 685 ECGILTAGGVAIEGSDFRNLPPHEMRAILPKIQVMARSLPLDKHTLVNNLRK-MGEVVAV 743
Query: 538 TGDGTNDASALHEADIGLAMGIAGTE 563
TGDGTNDA ALHEADIGLAMGIAGTE
Sbjct: 744 TGDGTNDAPALHEADIGLAMGIAGTE 769
|
|
| TAIR|locus:2120096 ACA2 "calcium ATPase 2" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1824 (647.1 bits), Expect = 3.8e-188, P = 3.8e-188
Identities = 368/568 (64%), Positives = 443/568 (77%)
Query: 2 VTAISDYKQSLQFRDLDREKKKIFIQVTRDGQRQKVCTYDLVVGDIVHLSIGDQVPAYGI 61
VTA SDY+QSLQFRDLD+EKKKI +QVTR+G RQK+ YDL+ GDIVHL+IGDQVPA G+
Sbjct: 214 VTATSDYRQSLQFRDLDKEKKKITVQVTRNGFRQKLSIYDLLPGDIVHLAIGDQVPADGL 273
Query: 62 FISGHSLLIDESSLSGQSEPRYMYEENPFLLAGTKVQGGSGKMLVTTVGMRTEWGKLMET 121
F+SG S++IDESSL+G+SEP + +NPFL++GTKVQ GS KM++TTVGMRT+WGKLM T
Sbjct: 274 FLSGFSVVIDESSLTGESEPVMVNAQNPFLMSGTKVQDGSCKMMITTVGMRTQWGKLMAT 333
Query: 122 LNEGGEDETPLQVKLNGVATIIGKIXXXXXXXXXXXXI-GRFLGEKVIHNEFTDWSSADA 180
L EGG+DETPLQVKLNGVATIIGKI + G F+ K+ WS +A
Sbjct: 334 LTEGGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVLVQGMFM-RKLSTGTHWVWSGDEA 392
Query: 181 LTLIDYFAVVVTIIDVAVPEGLPLAVTLSLAFAMKKLMNDGALVRHLSACETMGSASCIC 240
L L++YFA+ VTI+ VAVPEGLPLAVTLSLAFAMKK+MND ALVRHL+ACETMGSA+ IC
Sbjct: 393 LELLEYFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATTIC 452
Query: 241 TDKTRMLTTNHMVVDKIWIANTISNVEGNNRKDILQSEISERVLDITLQAIFQNTGSKVV 300
+DKT LTTNHM V K I + +V N+ LQSEI E + + +Q+IF NTG +VV
Sbjct: 453 SDKTGTLTTNHMTVVKSCICMNVQDVA--NKGSSLQSEIPESAVKLLIQSIFNNTGGEVV 510
Query: 301 KDKDGKNSILGTPTESAILEFGLRLGGDFEAQRREFKIVKVEPFNSVRKKMSVLIALPAG 360
+K GK +LGTPTE+AILE GL LGG F+ +R+ +K++KVEPFNS +K+M V+I LP G
Sbjct: 511 VNKHGKTELLGTPTETAILELGLSLGGKFQEERKSYKVIKVEPFNSTKKRMGVVIELPEG 570
Query: 361 G-MRAFCKGASEIVLSMCDKVVSDNGEPVPLSEEQFRNITDVINGFASEALRTLCLAFKD 419
G MRA KGASEIVL+ CDKVV+ +GE VPL EE + + IN FA+EALRTLCLA+ D
Sbjct: 571 GRMRAHTKGASEIVLAACDKVVNSSGEVVPLDEESIKYLNVTINEFANEALRTLCLAYMD 630
Query: 420 LNDS-SNENNIPDSGYTLIAVVGIKDPVRPGVKEAVQTCLEAGITVRMVTGDNINTARAI 478
+ S ++ IP SG+T + +VGIKDPVRPGVKE+V+ C AGITVRMVTGDNINTA+AI
Sbjct: 631 IEGGFSPDDAIPASGFTCVGIVGIKDPVRPGVKESVELCRRAGITVRMVTGDNINTAKAI 690
Query: 479 AKECGILTSDGEAVEGPEFRNMSPADI---IPKLQVMARSLPSDKHTLVTQLRNTFGEVV 535
A+ECGILT DG A+EGP FR + ++ IPK+QVMARS P DKHTLV QLR TF EVV
Sbjct: 691 ARECGILTDDGIAIEGPVFREKNQEELLELIPKIQVMARSSPMDKHTLVKQLRTTFDEVV 750
Query: 536 AVTGDGTNDASALHEADIGLAMGIAGTE 563
AVTGDGTNDA ALHEADIGLAMGIAGTE
Sbjct: 751 AVTGDGTNDAPALHEADIGLAMGIAGTE 778
|
|
| TAIR|locus:2059201 ACA7 "auto-regulated Ca2+-ATPase 7" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1799 (638.3 bits), Expect = 1.7e-185, P = 1.7e-185
Identities = 365/568 (64%), Positives = 440/568 (77%)
Query: 2 VTAISDYKQSLQFRDLDREKKKIFIQVTRDGQRQKVCTYDLVVGDIVHLSIGDQVPAYGI 61
VTA SDY+QSLQFRDLD+EKKKI +QVTR+G RQK+ YDL+ GD+VHL+IGDQVPA G+
Sbjct: 215 VTATSDYRQSLQFRDLDKEKKKITVQVTRNGFRQKMSIYDLLPGDVVHLAIGDQVPADGL 274
Query: 62 FISGHSLLIDESSLSGQSEPRYMYEENPFLLAGTKVQGGSGKMLVTTVGMRTEWGKLMET 121
F+SG S++IDESSL+G+SEP + +NPFLL+GTKVQ GS KMLVTTVGMRT+WGKLM T
Sbjct: 275 FLSGFSVVIDESSLTGESEPVMVTAQNPFLLSGTKVQDGSCKMLVTTVGMRTQWGKLMAT 334
Query: 122 LNEGGEDETPLQVKLNGVATIIGKIXXXXXXXXXXXXI-GRFLGEKVIHNEFTDWSSADA 180
L+EGG+DETPLQVKLNGVATIIGKI + G F+ K+ WS DA
Sbjct: 335 LSEGGDDETPLQVKLNGVATIIGKIGLSFAIVTFAVLVQGMFM-RKLSLGPHWWWSGDDA 393
Query: 181 LTLIDYFAVVVTIIDVAVPEGLPLAVTLSLAFAMKKLMNDGALVRHLSACETMGSASCIC 240
L L++YFA+ VTI+ VAVPEGLPLAVTLSLAFAMKK+MND ALVRHL+ACETMGSA+ IC
Sbjct: 394 LELLEYFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATTIC 453
Query: 241 TDKTRMLTTNHMVVDKIWIANTISNVEGNNRKDILQSEISERVLDITLQAIFQNTGSKVV 300
+DKT LTTNHM V K I + +V ++ LQS+I E L + LQ IF NTG +VV
Sbjct: 454 SDKTGTLTTNHMTVVKSCICMNVQDVA--SKSSSLQSDIPEAALKLLLQLIFNNTGGEVV 511
Query: 301 KDKDGKNSILGTPTESAILEFGLRLGGDFEAQRREFKIVKVEPFNSVRKKMSVLIALPAG 360
++ GK ILGTPTE+AILE GL LGG F+ +R+ K++KVEPFNS +K+M V+I LP G
Sbjct: 512 VNERGKTEILGTPTETAILELGLSLGGKFQEERQSNKVIKVEPFNSTKKRMGVVIELPEG 571
Query: 361 G-MRAFCKGASEIVLSMCDKVVSDNGEPVPLSEEQFRNITDVINGFASEALRTLCLAFKD 419
G +RA KGASEIVL+ CDKV++ +GE VPL +E + + I+ FA+EALRTLCLA+ D
Sbjct: 572 GRIRAHTKGASEIVLAACDKVINSSGEVVPLDDESIKFLNVTIDEFANEALRTLCLAYMD 631
Query: 420 LNDS-SNENNIPDSGYTLIAVVGIKDPVRPGVKEAVQTCLEAGITVRMVTGDNINTARAI 478
+ S + IP+ G+T I +VGIKDPVRPGV+E+V+ C AGI VRMVTGDNINTA+AI
Sbjct: 632 IESGFSADEGIPEKGFTCIGIVGIKDPVRPGVRESVELCRRAGIMVRMVTGDNINTAKAI 691
Query: 479 AKECGILTSDGEAVEGPEFRNMSPAD---IIPKLQVMARSLPSDKHTLVTQLRNTFGEVV 535
A+ECGILT DG A+EGP FR + + +IPK+QVMARS P DKHTLV QLR TF EVV
Sbjct: 692 ARECGILTDDGIAIEGPVFREKNQEEMLELIPKIQVMARSSPMDKHTLVKQLRTTFDEVV 751
Query: 536 AVTGDGTNDASALHEADIGLAMGIAGTE 563
AVTGDGTNDA ALHEADIGLAMGIAGTE
Sbjct: 752 AVTGDGTNDAPALHEADIGLAMGIAGTE 779
|
|
| TAIR|locus:2029794 ACA1 "autoinhibited Ca2+-ATPase 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1761 (625.0 bits), Expect = 1.8e-181, P = 1.8e-181
Identities = 357/566 (63%), Positives = 425/566 (75%)
Query: 2 VTAISDYKQSLQFRDLDREKKKIFIQVTRDGQRQKVCTYDLVVGDIVHLSIGDQVPAYGI 61
VTA SDY+QSLQF+DLD EKKKI +QVTRD RQK+ YDL+ GD+VHL IGDQ+PA G+
Sbjct: 216 VTATSDYRQSLQFKDLDAEKKKIVVQVTRDKLRQKISIYDLLPGDVVHLGIGDQIPADGL 275
Query: 62 FISGHSLLIDESSLSGQSEPRYMYEENPFLLAGTKVQGGSGKMLVTTVGMRTEWGKLMET 121
FISG S+LI+ESSL+G+SEP + E+PFLL+GTKVQ GS KMLVTTVGMRT+WGKLM T
Sbjct: 276 FISGFSVLINESSLTGESEPVSVSVEHPFLLSGTKVQDGSCKMLVTTVGMRTQWGKLMAT 335
Query: 122 LNEGGEDETPLQVKLNGVATIIGKIXXXXXXXXXXXXIGRFLGEKVIHNEFTDWSSADAL 181
L+EGG+DETPLQVKLNGVATIIGKI + +K + N W++ + +
Sbjct: 336 LSEGGDDETPLQVKLNGVATIIGKIGLFFAVITFAVLVQGLANQKRLDNSHWIWTADELM 395
Query: 182 TLIDYFAVVVTIIDVAVPEGLPLAVTLSLAFAMKKLMNDGALVRHLSACETMGSASCICT 241
+++YFAV VTI+ VAVPEGLPLAVTLSLAFAMKK+MND ALVR+L+ACETMGSA+ IC+
Sbjct: 396 AMLEYFAVAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRNLAACETMGSATTICS 455
Query: 242 DKTRMLTTNHMVVDKIWIANTISNVEGNNRKDILQSEISERVLDITLQAIFQNTGSKVVK 301
DKT LTTNHM V K I V G + S I E + + LQ+IF NTG ++V
Sbjct: 456 DKTGTLTTNHMTVVKACICEQAKEVNGPDAAMKFASGIPESAVKLLLQSIFTNTGGEIVV 515
Query: 302 DKDGKNSILGTPTESAILEFGLRLGGDFEAQRREFKIVKVEPFNSVRKKMSVLIALPAGG 361
K K ILGTPTE+A+LEFGL LGGDF+ R+ +VKVEPFNS +K+M V+I LP
Sbjct: 516 GKGNKTEILGTPTETALLEFGLSLGGDFQEVRQASNVVKVEPFNSTKKRMGVVIELPERH 575
Query: 362 MRAFCKGASEIVLSMCDKVVSDNGEPVPLSEEQFRNITDVINGFASEALRTLCLAFKDLN 421
RA CKGASEIVL CDK ++ +GE VPL E+ ++ ++I FASEALRTLCLA+ ++
Sbjct: 576 FRAHCKGASEIVLDSCDKYINKDGEVVPLDEKSTSHLKNIIEEFASEALRTLCLAYFEIG 635
Query: 422 DS-SNENNIPDSGYTLIAVVGIKDPVRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAK 480
D S E IP GYT I +VGIKDPVRPGVKE+V C AGITVRMVTGDN+ TA+AIA+
Sbjct: 636 DEFSLEAPIPSGGYTCIGIVGIKDPVRPGVKESVAICKSAGITVRMVTGDNLTTAKAIAR 695
Query: 481 ECGILTSDGEAVEGPEFRNMSPADI---IPKLQVMARSLPSDKHTLVTQLRNTFGEVVAV 537
ECGILT DG A+EGPEFR S ++ IPKLQVMARS P DKHTLV LR F EVVAV
Sbjct: 696 ECGILTDDGIAIEGPEFREKSDEELLKLIPKLQVMARSSPMDKHTLVRLLRTMFQEVVAV 755
Query: 538 TGDGTNDASALHEADIGLAMGIAGTE 563
TGDGTNDA ALHEADIGLAMGI+GTE
Sbjct: 756 TGDGTNDAPALHEADIGLAMGISGTE 781
|
|
| TAIR|locus:2175579 ACA8 ""autoinhibited Ca2+ -ATPase, isoform 8"" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1211 (431.4 bits), Expect = 3.5e-123, P = 3.5e-123
Identities = 275/587 (46%), Positives = 370/587 (63%)
Query: 1 MVTAISDYKQSLQFRDLDREKKKIFIQVTRDGQRQKVCTYDLVVGDIVHLSIGDQVPAYG 60
+VTA+SDYKQSLQF++L+ EK+ I ++V R G+R ++ YD+VVGD++ L+IG+QVPA G
Sbjct: 233 VVTAVSDYKQSLQFQNLNDEKRNIHLEVLRGGRRVEISIYDIVVGDVIPLNIGNQVPADG 292
Query: 61 IFISGHSLLIDESSLSGQSE-PRYMYEENPFLLAGTKVQGGSGKMLVTTVGMRTEWGKLM 119
+ ISGHSL +DESS++G+S+ ++PFL++G KV G+G MLVT VG+ TEWG LM
Sbjct: 293 VLISGHSLALDESSMTGESKIVNKDANKDPFLMSGCKVADGNGSMLVTGVGVNTEWGLLM 352
Query: 120 ETLNEGGEDETPLQVKLNGVATIIGKIXXXXXXXXXXXXIGR-FLGEKVIHN---EFTDW 175
+++E +ETPLQV+LNGVAT IG I + R F G +N +F
Sbjct: 353 ASISEDNGEETPLQVRLNGVATFIGSIGLAVAAAVLVILLTRYFTGHTKDNNGGPQFVKG 412
Query: 176 SSADALTLIDY---FAVVVTIIDVAVPEGLPLAVTLSLAFAMKKLMNDGALVRHLSACET 232
+ + D V VTI+ VAVPEGLPLAVTL+LA++M+K+M D ALVR LSACET
Sbjct: 413 KTKVGHVIDDVVKVLTVAVTIVVVAVPEGLPLAVTLTLAYSMRKMMADKALVRRLSACET 472
Query: 233 MGSASCICTDKTRMLTTNHMVVDKIWIANTISNVEGNNRKDILQSEISERVLDITLQAIF 292
MGSA+ IC+DKT LT N M V + + G + D Q + + + ++ I
Sbjct: 473 MGSATTICSDKTGTLTLNQMTV--------VESYAGGKKTDTEQ--LPATITSLVVEGIS 522
Query: 293 QNT-GSKVVKDKDGKNSILGTPTESAILEFGLRLGGDFEAQRREFKIVKVEPFNSVRKKM 351
QNT GS V + G G+PTE AIL +G++LG +FE R + I+ PFNS +K+
Sbjct: 523 QNTTGSIFVPEGGGDLEYSGSPTEKAILGWGVKLGMNFETARSQSSILHAFPFNSEKKRG 582
Query: 352 SVLIALPAGGMRAFCKGASEIVLSMCDKVVSDNGEPVPLSEEQFRNITDVINGFASEALR 411
V + G + KGASEIVL+ C + ++G P+++++ + IN A LR
Sbjct: 583 GVAVKTADGEVHVHWKGASEIVLASCRSYIDEDGNVAPMTDDKASFFKNGINDMAGRTLR 642
Query: 412 TLCLAFKDLN----DSSNENN---IPDSGYTLIAVVGIKDPVRPGVKEAVQTCLEAGITV 464
+ LAF+ + E + +P+ L+A+VGIKDP RPGVK++V C AG+ V
Sbjct: 643 CVALAFRTYEAEKVPTGEELSKWVLPEDDLILLAIVGIKDPCRPGVKDSVVLCQNAGVKV 702
Query: 465 RMVTGDNINTARAIAKECGILTSDGEA-----VEGPEFRNMSPAD---IIPKLQVMARSL 516
RMVTGDN+ TARAIA ECGIL+SD + +EG FR M+ A+ I K+ VM RS
Sbjct: 703 RMVTGDNVQTARAIALECGILSSDADLSEPTLIEGKSFREMTDAERDKISDKISVMGRSS 762
Query: 517 PSDKHTLVTQLRNTFGEVVAVTGDGTNDASALHEADIGLAMGIAGTE 563
P+DK LV LR G VVAVTGDGTNDA ALHEADIGLAMGIAGTE
Sbjct: 763 PNDKLLLVQSLRRQ-GHVVAVTGDGTNDAPALHEADIGLAMGIAGTE 808
|
|
| TAIR|locus:2094726 ACA9 "autoinhibited Ca(2+)-ATPase 9" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1134 (404.2 bits), Expect = 5.0e-115, P = 5.0e-115
Identities = 265/589 (44%), Positives = 366/589 (62%)
Query: 1 MVTAISDYKQSLQFRDLDREKKKIFIQVTRDGQRQKVCTYDLVVGDIVHLSIGDQVPAYG 60
+VTA+SDY+QSLQF++L+ EK+ I ++V R G+ K+ YD+VVGD++ L IGDQVPA G
Sbjct: 247 VVTAVSDYRQSLQFQNLNDEKRNIQLEVMRGGRTVKISIYDVVVGDVIPLRIGDQVPADG 306
Query: 61 IFISGHSLLIDESSLSGQSEPRYMYEENPFLLAGTKVQGGSGKMLVTTVGMRTEWGKLME 120
+ ISGHSL IDESS++G+S+ + +++PFL++G KV G G MLVT VG+ TEWG LM
Sbjct: 307 VLISGHSLAIDESSMTGESKIVHKDQKSPFLMSGCKVADGVGNMLVTGVGINTEWGLLMA 366
Query: 121 TLNEGGEDETPLQVKLNGVATIIGKIXXXXXXXXXXXXIGR-FLGEKVIHNEFTDW---- 175
+++E +ETPLQV+LNG+AT IG + + R F G N T +
Sbjct: 367 SISEDTGEETPLQVRLNGLATFIGIVGLSVALVVLVALLVRYFTGTTQDTNGATQFIKGT 426
Query: 176 -SSADALT-LIDYFAVVVTIIDVAVPEGLPLAVTLSLAFAMKKLMNDGALVRHLSACETM 233
S +D + + F + VTI+ VAVPEGLPLAVTL+LA++M+K+M D ALVR LSACETM
Sbjct: 427 TSISDIVDDCVKIFTIAVTIVVVAVPEGLPLAVTLTLAYSMRKMMADKALVRRLSACETM 486
Query: 234 GSASCICTDKTRMLTTNHMVVDKIWIANTISNVEGNNRKDILQSEISERVLDITLQAIFQ 293
GSA+ IC+DKT LT N M V + + + +V N S + +++ + + + Q
Sbjct: 487 GSATTICSDKTGTLTLNQMTVVETYAGGSKMDVADN------PSGLHPKLVALISEGVAQ 540
Query: 294 NTGSKVVKDKDGKN-SILGTPTESAILEFGLRLGGDFEAQRREFKIVKVEPFNSVRKKMS 352
NT + KDG I G+PTE AIL + +LG F+ R E I+ PFNS +K+
Sbjct: 541 NTTGNIFHPKDGGEVEISGSPTEKAILSWAYKLGMKFDTIRSESAIIHAFPFNSEKKRGG 600
Query: 353 VLIALPAGGMRAFC--KGASEIVLSMCDKVVSDNGEPVPL-SEEQFRNITDVINGFASEA 409
V A+ G F KGA+EIVL+ C + + NG + S+++F + I+ A +
Sbjct: 601 V--AVLRGDSEVFIHWKGAAEIVLACCTQYMDSNGTLQSIESQKEFFRVA--IDSMAKNS 656
Query: 410 LRTLCLAFK--DLNDSSNENN------IPDSGYTLIAVVGIKDPVRPGVKEAVQTCLEAG 461
LR + +A + +LN E +P+ L+A+VGIKDP RPGV+EAV+ C AG
Sbjct: 657 LRCVAIACRTQELNQVPKEQEDLDKWALPEDELILLAIVGIKDPCRPGVREAVRICTSAG 716
Query: 462 ITVRMVTGDNINTARAIAKECGILTSDGEAVE-----GPEFRNMSPADI--IPKLQVMAR 514
+ VRMVTGDN+ TA+AIA ECGIL+SD EAVE G FR +S + + K +
Sbjct: 717 VKVRMVTGDNLQTAKAIALECGILSSDTEAVEPTIIEGKVFRELSEKEREQVAKKITVMG 776
Query: 515 SLPSDKHTLVTQLRNTFGEVVAVTGDGTNDASALHEADIGLAMGIAGTE 563
+ L+ Q G+VVAVTGDGTNDA ALHEADIGL+MGI+GTE
Sbjct: 777 RSSPNDKLLLVQALRKNGDVVAVTGDGTNDAPALHEADIGLSMGISGTE 825
|
|
| TAIR|locus:2087363 AT3G63380 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1130 (402.8 bits), Expect = 1.3e-114, P = 1.3e-114
Identities = 257/582 (44%), Positives = 371/582 (63%)
Query: 1 MVTAISDYKQSLQFRDLDREKKKIFIQVTRDGQRQKVCTYDLVVGDIVHLSIGDQVPAYG 60
+V+A+S+++Q QF L + I ++V RD +RQ + +D+VVGD+V L IGDQ+PA G
Sbjct: 205 VVSALSNFRQERQFDKLSKISNNIKVEVLRDSRRQHISIFDVVVGDVVFLKIGDQIPADG 264
Query: 61 IFISGHSLLIDESSLSGQSEPRYM-YEENPFLLAGTKVQGGSGKMLVTTVGMRTEWGKLM 119
+F+ GHSL +DESS++G+S+ + +++NPFL +GTK+ G +MLV +VGM T WG+ M
Sbjct: 265 LFLEGHSLQVDESSMTGESDHLEVDHKDNPFLFSGTKIVDGFAQMLVVSVGMSTTWGQTM 324
Query: 120 ETLNEGGEDETPLQVKLNGVATIIGKIXXXXXXXXXXXXIGR-FLG--EKVIHNEFTDWS 176
++N+ + TPLQV+L+ + + IGKI + R F G EK E+
Sbjct: 325 SSINQDSSERTPLQVRLDTLTSTIGKIGLTVAALVLVVLLVRYFTGNTEKEGKREYNGSK 384
Query: 177 S-ADAL--TLIDYFAVVVTIIDVAVPEGLPLAVTLSLAFAMKKLMNDGALVRHLSACETM 233
+ D + +++ A VTI+ VA+PEGLPLAVTL+LA++MK++M+D A+VR LSACETM
Sbjct: 385 TPVDTVVNSVVRIVAAAVTIVVVAIPEGLPLAVTLTLAYSMKRMMSDQAMVRKLSACETM 444
Query: 234 GSASCICTDKTRMLTTNHMVVDKIWIANTISNVEGNNRKDILQSEISERVLDITLQAIFQ 293
GSA+ ICTDKT LT N M V K W+ ++ ++ K IS VLD+ Q
Sbjct: 445 GSATVICTDKTGTLTLNEMKVTKFWLGQ--ESIHEDSTK-----MISPDVLDLLYQGTGL 497
Query: 294 NT-GSKVVKDKDGKNSILGTPTESAILEFG-LRLGGDFEAQRREFKIVKVEPFNSVRKKM 351
NT GS V D G+PTE A+L + L LG D E+ +++ ++++VE F+S +K+
Sbjct: 498 NTTGSVCVSDSGSTPEFSGSPTEKALLSWTVLNLGMDMESVKQKHEVLRVETFSSAKKRS 557
Query: 352 SVLIALPAGG-MRAFCKGASEIVLSMCDKVVSDNGEPVPLSEEQFRN-ITDVINGFASEA 409
VL+ + + KGA+E+VL+MC + G V L + ++ I +I G A+ +
Sbjct: 558 GVLVRRKSDNTVHVHWKGAAEMVLAMCSHYYTSTGS-VDLMDSTAKSRIQAIIQGMAASS 616
Query: 410 LRTLCLAFKDLNDSSNENNIPDSGYTLIAVVGIKDPVRPGVKEAVQTCLEAGITVRMVTG 469
LR C+AF +SN++ + + G TL+ +VG+KDP RPGV +AV+TC AG+T++M+TG
Sbjct: 617 LR--CIAFAH-KIASNDSVLEEDGLTLMGIVGLKDPCRPGVSKAVETCKLAGVTIKMITG 673
Query: 470 DNINTARAIAKECGILT---SDGE--AVEGPEFRNMSPADI---IPKLQVMARSLPSDKH 521
DN+ TA+AIA ECGIL D E VEG +FRN + + + K++VMARS PSDK
Sbjct: 674 DNVFTAKAIAFECGILDHNDKDEEDAVVEGVQFRNYTDEERMQKVDKIRVMARSSPSDKL 733
Query: 522 TLVTQLRNTFGEVVAVTGDGTNDASALHEADIGLAMGIAGTE 563
+V LR G VVAVTGDGTNDA AL EADIGL+MGI GTE
Sbjct: 734 LMVKCLRLK-GHVVAVTGDGTNDAPALKEADIGLSMGIQGTE 774
|
|
| DICTYBASE|DDB_G0289473 DDB_G0289473 "Ca2+-ATPase" [Dictyostelium discoideum (taxid:44689)] | Back alignment and assigned GO terms |
|---|
Score = 586 (211.3 bits), Expect = 1.9e-107, Sum P(2) = 1.9e-107
Identities = 142/317 (44%), Positives = 196/317 (61%)
Query: 261 NTISNVEGN-NRKDILQSEISE-RVLDITLQAIFQNTGSKVVKDKDGKNSILGTPTESAI 318
+ + N G N+ D +S R+L + + I N+ + + K D N +G+ TE A+
Sbjct: 427 HNVYNDSGKVNQHDCEMEMLSNSRILTLLAEGISLNSTAYIEKHTDRLNDHIGSKTECAL 486
Query: 319 LEFGLRLGGD-FEAQRREFK--IVKVEPFNSVRKKMSVLIALP---AGGMRAFCKGASEI 372
LE+ + +E R+E K +VKV PF+S +K +VL+ +GG+ + KGA+EI
Sbjct: 487 LEWLETMPNQSYETVRKENKDRVVKVYPFSSEKKMSAVLMNQNQNISGGLIIYVKGAAEI 546
Query: 373 VLSMCDKVVSDNGEPVPLSEEQFRNITDVINGFASEALRTLCLAFKDLND---SSNENNI 429
VL+ C +V NGE +S ++ + I FASE LRTL LA+K++N+ S +E +
Sbjct: 547 VLNNCTNIVDKNGESTQMSRDEKMLLQKDIEIFASEGLRTLVLAYKEINNEPSSEDEAKV 606
Query: 430 PDSGYTLIAVVGIKDPVRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAKECGILTSDG 489
+G T + +VGIKDPVR V AV+ C AGI VRM+TGDNI TA+ IA+ECGIL G
Sbjct: 607 IYTGLTFLGLVGIKDPVRKEVPRAVKRCQGAGIFVRMLTGDNILTAKNIARECGILKDGG 666
Query: 490 EAVEGPEFRNMSPAD---IIPKLQVMARSLPSDKHTLVTQLRNTFGEVVAVTGDGTNDAS 546
A+EGP+FR ++ IIP LQV+AR P+DK LV +LR GEVVAVTGDG NDA
Sbjct: 667 VAIEGPQFRLLTDDQLDTIIPHLQVIARCSPTDKFRLVHRLRE-LGEVVAVTGDGVNDAP 725
Query: 547 ALHEADIGLAMGIAGTE 563
L EAD+G +MGIAGTE
Sbjct: 726 QLKEADVGFSMGIAGTE 742
|
|
| UNIPROTKB|F1PHQ7 ATP2B4 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
Score = 687 (246.9 bits), Expect = 2.1e-107, Sum P(3) = 2.1e-107
Identities = 173/393 (44%), Positives = 233/393 (59%)
Query: 127 EDETPLQVKLNGVATIIGKIXXXXXXXXXXXXIGRFLGEK-VIHNEFTDWSSADALTLID 185
++++ LQ KL +A IGK I F+ + VIH W S I
Sbjct: 347 KEKSVLQGKLTRLAVQIGKAGLIMSAITVLILILYFVIDNFVIHRR--PWLSECTPIYIQ 404
Query: 186 YFA----VVVTIIDVAVPEGLPLAVTLSLAFAMKKLMNDGALVRHLSACETMGSASCICT 241
YF + +T++ VAVPEGLPLAVT+SLA+++KK+M D LVRHL ACETMG+A+ IC+
Sbjct: 405 YFVKFFIIGITVLVVAVPEGLPLAVTISLAYSVKKMMKDNNLVRHLDACETMGNATAICS 464
Query: 242 DKTRMLTTNHMVVDKIWIANTISNVEGNNRKDILQSEISERVLDITLQAIFQNTG--SKV 299
DKT LT N M V + +I +T + D+L +VLD+ + I N+ SK+
Sbjct: 465 DKTGTLTMNRMTVVQAYIGDT--HYHQLPSPDVLVP----KVLDLIVNGISINSAYTSKI 518
Query: 300 VK-DKDGK-NSILGTPTESAILEFGLRLGGDFEAQRREF---KIVKVEPFNSVRKKMSVL 354
+ +K+G +G TE A+L F L D+ A R E K+ KV FNSVRK MS +
Sbjct: 519 LPPEKEGGLPRQVGNKTECALLGFVTDLKQDYHAVRNEVPEEKLYKVYTFNSVRKSMSTV 578
Query: 355 IALPAGGMRAFCKGASEIVLSMCDKVVSDNGEPVPL-SEEQFRNITDVINGFASEALRTL 413
I P+GG R + KGASEI+L C++++ GE VP ++++ + VI AS+ LRTL
Sbjct: 579 IEKPSGGYRMYSKGASEIILRKCNRILDKRGEVVPFKNKDRDEMVRTVIEPMASQGLRTL 638
Query: 414 CLAFKDLNDSS----NENNIPDSGYTLIAVVGIKDPVRPGVKEAVQTCLEAGITVRMVTG 469
C+A++D ND NE+ I T IAVVGI+DPVRP V EA+ C AGITVRMVTG
Sbjct: 639 CIAYRDFNDGEPPWDNESEILTE-LTCIAVVGIEDPVRPEVPEAIAKCKRAGITVRMVTG 697
Query: 470 DNINTARAIAKECGILT--SDGEAVEGPEFRNM 500
DNINTARAIA +CGI+T D +EG EF +
Sbjct: 698 DNINTARAIATKCGIVTPGDDFLCLEGKEFNRL 730
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
ID ![]() | Name ![]() | Annotated EC number ![]() | Identity ![]() | Query coverage ![]() | Hit coverage ![]() | RBH(Q2H) ![]() | RBH(H2Q) ![]() |
| Q2QY12 | ACA4_ORYSJ | 3, ., 6, ., 3, ., 8 | 0.7054 | 1.0 | 0.5418 | yes | no |
| Q2RAS0 | ACA5_ORYSJ | 3, ., 6, ., 3, ., 8 | 0.7037 | 1.0 | 0.5535 | yes | no |
| Q9M2L4 | ACA11_ARATH | 3, ., 6, ., 3, ., 8 | 0.7349 | 0.9893 | 0.5434 | yes | no |
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 563 | |||
| TIGR01517 | 944 | TIGR01517, ATPase-IIB_Ca, plasma-membrane calcium- | 0.0 | |
| COG0474 | 917 | COG0474, MgtA, Cation transport ATPase [Inorganic | 1e-139 | |
| TIGR01494 | 543 | TIGR01494, ATPase_P-type, ATPase, P-type (transpor | 1e-93 | |
| TIGR01522 | 884 | TIGR01522, ATPase-IIA2_Ca, golgi membrane calcium- | 3e-92 | |
| TIGR01116 | 917 | TIGR01116, ATPase-IIA1_Ca, sarco/endoplasmic retic | 5e-87 | |
| TIGR01106 | 997 | TIGR01106, ATPase-IIC_X-K, sodium or proton efflux | 2e-67 | |
| PRK10517 | 902 | PRK10517, PRK10517, magnesium-transporting ATPase | 2e-56 | |
| TIGR01647 | 754 | TIGR01647, ATPase-IIIA_H, plasma-membrane proton-e | 5e-53 | |
| TIGR01524 | 867 | TIGR01524, ATPase-IIIB_Mg, magnesium-translocating | 2e-50 | |
| pfam00122 | 222 | pfam00122, E1-E2_ATPase, E1-E2 ATPase | 3e-49 | |
| TIGR01523 | 1053 | TIGR01523, ATPase-IID_K-Na, potassium and/or sodiu | 4e-45 | |
| TIGR01657 | 1054 | TIGR01657, P-ATPase-V, P-type ATPase of unknown pu | 3e-44 | |
| PRK15122 | 903 | PRK15122, PRK15122, magnesium-transporting ATPase; | 3e-39 | |
| TIGR01652 | 1057 | TIGR01652, ATPase-Plipid, phospholipid-translocati | 2e-27 | |
| pfam13246 | 91 | pfam13246, Hydrolase_like2, Putative hydrolase of | 1e-24 | |
| COG2217 | 713 | COG2217, ZntA, Cation transport ATPase [Inorganic | 1e-21 | |
| TIGR01511 | 572 | TIGR01511, ATPase-IB1_Cu, copper-(or silver)-trans | 3e-19 | |
| COG2217 | 713 | COG2217, ZntA, Cation transport ATPase [Inorganic | 7e-17 | |
| TIGR01525 | 556 | TIGR01525, ATPase-IB_hvy, heavy metal translocatin | 4e-16 | |
| TIGR01525 | 556 | TIGR01525, ATPase-IB_hvy, heavy metal translocatin | 5e-16 | |
| COG2216 | 681 | COG2216, KdpB, High-affinity K+ transport system, | 5e-16 | |
| TIGR01512 | 536 | TIGR01512, ATPase-IB2_Cd, heavy metal-(Cd/Co/Hg/Pb | 3e-15 | |
| PRK01122 | 679 | PRK01122, PRK01122, potassium-transporting ATPase | 8e-15 | |
| PRK10671 | 834 | PRK10671, copA, copper exporting ATPase; Provision | 1e-14 | |
| PLN03190 | 1178 | PLN03190, PLN03190, aminophospholipid translocase; | 2e-14 | |
| TIGR01497 | 675 | TIGR01497, kdpB, K+-transporting ATPase, B subunit | 7e-14 | |
| PRK11033 | 741 | PRK11033, zntA, zinc/cadmium/mercury/lead-transpor | 2e-13 | |
| PRK14010 | 673 | PRK14010, PRK14010, potassium-transporting ATPase | 5e-13 | |
| TIGR01511 | 572 | TIGR01511, ATPase-IB1_Cu, copper-(or silver)-trans | 1e-12 | |
| TIGR01512 | 536 | TIGR01512, ATPase-IB2_Cd, heavy metal-(Cd/Co/Hg/Pb | 2e-12 | |
| pfam00702 | 187 | pfam00702, Hydrolase, haloacid dehalogenase-like h | 2e-09 | |
| cd01427 | 139 | cd01427, HAD_like, Haloacid dehalogenase-like hydr | 5e-04 | |
| PRK11033 | 741 | PRK11033, zntA, zinc/cadmium/mercury/lead-transpor | 8e-04 | |
| COG0560 | 212 | COG0560, SerB, Phosphoserine phosphatase [Amino ac | 0.004 |
| >gnl|CDD|188151 TIGR01517, ATPase-IIB_Ca, plasma-membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 726 bits (1876), Expect = 0.0
Identities = 298/568 (52%), Positives = 389/568 (68%), Gaps = 14/568 (2%)
Query: 1 MVTAISDYKQSLQFRDLDREKKKIFIQVTRDGQRQKVCTYDLVVGDIVHLSIGDQVPAYG 60
+VTA++DYK+ LQFR L+REK I V R GQ Q++ +D+VVGDIV LS GD VPA G
Sbjct: 144 LVTAVNDYKKELQFRQLNREKSAQKIAVIRGGQEQQISIHDIVVGDIVSLSTGDVVPADG 203
Query: 61 IFISGHSLLIDESSLSGQSEPRYMY-EENPFLLAGTKVQGGSGKMLVTTVGMRTEWGKLM 119
+FISG SL IDESS++G+S+P ++PFLL+GT V GSG+MLVT VG+ + GKLM
Sbjct: 204 VFISGLSLEIDESSITGESDPIKKGPVQDPFLLSGTVVNEGSGRMLVTAVGVNSFGGKLM 263
Query: 120 ETLNEGGEDETPLQVKLNGVATIIGKIELFFSVLEFLVLIGRFLGEKVIHNEFTDWSSAD 179
L + GED TPLQ KL+ +A +IGK + +VL FLVL R++ + + D
Sbjct: 264 MELRQAGEDSTPLQEKLSELAGLIGKFGMGSAVLLFLVLSLRYVFRIIRGDGRDT--EED 321
Query: 180 ALTLIDYFAVVVTIIDVAVPEGLPLAVTLSLAFAMKKLMNDGALVRHLSACETMGSASCI 239
A T +D+F + VTI+ VAVPEGLPLAVT++LA++MKK+M D LVRHL+ACETMGSA+ I
Sbjct: 322 AQTFLDHFIIAVTIVVVAVPEGLPLAVTIALAYSMKKMMKDNNLVRHLAACETMGSATAI 381
Query: 240 CTDKTRMLTTNHMVVDKIWIANTISNVEGNNRKDILQSEISERVLDITLQAIFQNTGSKV 299
C+DKT LT N M V + +I NV R + + V +I ++ I N+ S+
Sbjct: 382 CSDKTGTLTQNVMSVVQGYIGEQRFNVRDVLRN------VPKHVRNILVEGISLNSSSEE 435
Query: 300 VKDKDGKNSILGTPTESAILEFGLRLGGDFEAQRREFKIVKVEPFNSVRKKMSVLIALPA 359
V D+ GK + +G+ TE A+L+FGL L D++ R E K+VK+ PFNS RK MSV++
Sbjct: 436 VVDRGGKRAFIGSKTECALLDFGLLLLRDYQEVRAEEKVVKIYPFNSERKFMSVVVKHSG 495
Query: 360 GGMRAFCKGASEIVLSMCDKVVSDNGEPVPLSEEQFRNITDVINGFASEALRTLCLAFKD 419
G R F KGASEIVL C K + NGE P+S++ DVI AS+ALRT+CLA++D
Sbjct: 496 GKYREFRKGASEIVLKPCRKRLDSNGEATPISDDDKDRCADVIEPLASDALRTICLAYRD 555
Query: 420 L-NDSSNENNIPDSGYTLIAVVGIKDPVRPGVKEAVQTCLEAGITVRMVTGDNINTARAI 478
+ + P+ G TLI VVGIKDP+RPGV+EAVQ C AGITVRMVTGDNI+TA+AI
Sbjct: 556 FAPEEFPRKDYPNKGLTLIGVVGIKDPLRPGVREAVQECQRAGITVRMVTGDNIDTAKAI 615
Query: 479 AKECGILTSDGEAVEGPEFRNMSPAD---IIPKLQVMARSLPSDKHTLVTQLRNTFGEVV 535
A+ CGILT G A+EG EFR++ + I+PKL+V+ARS P DK LV L++ GEVV
Sbjct: 616 ARNCGILTFGGLAMEGKEFRSLVYEEMDPILPKLRVLARSSPLDKQLLVLMLKD-MGEVV 674
Query: 536 AVTGDGTNDASALHEADIGLAMGIAGTE 563
AVTGDGTNDA AL AD+G +MGI+GTE
Sbjct: 675 AVTGDGTNDAPALKLADVGFSMGISGTE 702
|
This model describes the P-type ATPase responsible for translocating calcium ions across the plasma membrane of eukaryotes , out of the cell. In some organisms, this type of pump may also be found in vacuolar membranes. In humans and mice, at least, there are multiple isoforms of the PMCA pump with overlapping but not redundant functions. Accordingly, there are no human diseases linked to PMCA defects, although alterations of PMCA function do elicit physiological effects. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1) which are modelled by TIGR01116 and TIGR01522. This model is well separated from those. Length = 944 |
| >gnl|CDD|223550 COG0474, MgtA, Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Score = 425 bits (1095), Expect = e-139
Identities = 199/568 (35%), Positives = 287/568 (50%), Gaps = 54/568 (9%)
Query: 18 DREKKKIFIQVTRDGQRQKVCTYDLVVGDIVHLSIGDQVPAYGIFISGHSLLIDESSLSG 77
++ +V RDG+ ++ +LV GDIV L GD VPA + L +DES+L+G
Sbjct: 134 LKKMSSPKAKVLRDGKFVEIPASELVPGDIVLLEAGDVVPADLRLLESSDLEVDESALTG 193
Query: 78 QSEP-------------RYMYEENPFLLAGTKVQGGSGKMLVTTVGMRTEWGKLMETLNE 124
+S P + + L +GT V G K +V G TE+GK+ L
Sbjct: 194 ESLPVEKQALPLTKSDAPLGLDRDNMLFSGTTVVSGRAKGIVVATGFETEFGKIARLLPT 253
Query: 125 GGEDETPLQVKLNGVATIIGKIELFFSVLEFLVLIGRFLGEKVIHNEFTDWSSADALTLI 184
E +TPLQ KLN + + + L L F+V + R +
Sbjct: 254 KKEVKTPLQRKLNKLGKFLLVLALVLGALVFVVGLFRGGN---------GLLES------ 298
Query: 185 DYFAVVVTIIDVAVPEGLPLAVTLSLAFAMKKLMNDGALVRHLSACETMGSASCICTDKT 244
F + + AVPEGLP VT++LA +++ D A+VR L+A ET+GS IC+DKT
Sbjct: 299 --FLTALALAVAAVPEGLPAVVTIALALGAQRMAKDNAIVRSLNAIETLGSVDVICSDKT 356
Query: 245 RMLTTNHMVVDKIWIANTISNVEGNNRKDILQSEISERVLDITLQAIFQNTGSKVVKDKD 304
LT N M V KI+I +++ + KD S +L L A N+ +
Sbjct: 357 GTLTQNKMTVKKIYINGGGKDIDDKDLKD------SPALLRFLLAAALCNSVTPEKNGWY 410
Query: 305 GKNSILGTPTESAILEFGLRLGG--DFEAQRREFKIVKVEPFNSVRKKMSVLIALPAGGM 362
G PTE A++EF +LG D E+ I+ PF+S RK+MSV++ G
Sbjct: 411 ----QAGDPTEGALVEFAEKLGFSLDLSGLEVEYPILAEIPFDSERKRMSVIVKTDEGKY 466
Query: 363 RAFCKGASEIVLSMCDKVVSDNGEPVPLSEEQFRNITDVINGFASEALRTLCLAFKDL-- 420
F KGA E++L C + GE PL+EE R + + + ASE LR L +A+K L
Sbjct: 467 ILFVKGAPEVILERCKSI----GELEPLTEEGLRTLEEAVKELASEGLRVLAVAYKKLDR 522
Query: 421 NDSSNENNIPDSGYTLIAVVGIKDPVRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAK 480
+ +E + +S + + GI+DP R VKEA++ EAGI V M+TGD++ TA AIAK
Sbjct: 523 AEKDDEVDEIESDLVFLGLTGIEDPPREDVKEAIEELREAGIKVWMITGDHVETAIAIAK 582
Query: 481 ECGILTSD--GEAVEGPEFRNMSP---ADIIPKLQVMARSLPSDKHTLVTQLRNTFGEVV 535
ECGI ++G E +S A+++ +L V AR P K +V L+ + G VV
Sbjct: 583 ECGIEAEAESALVIDGAELDALSDEELAELVEELSVFARVSPEQKARIVEALQKS-GHVV 641
Query: 536 AVTGDGTNDASALHEADIGLAMGIAGTE 563
A+TGDG NDA AL AD+G+AMG GT+
Sbjct: 642 AMTGDGVNDAPALKAADVGIAMGGEGTD 669
|
Length = 917 |
| >gnl|CDD|233438 TIGR01494, ATPase_P-type, ATPase, P-type (transporting), HAD superfamily, subfamily IC | Back alignment and domain information |
|---|
Score = 296 bits (760), Expect = 1e-93
Identities = 174/565 (30%), Positives = 248/565 (43%), Gaps = 117/565 (20%)
Query: 4 AISDYKQSLQFRDLDREKKKIFIQVTRDGQRQKVCTYDLVVGDIVHLSIGDQVPAYGIFI 63
D +SL DR V R+G +++ DLV GD+V + G+ VPA G+ +
Sbjct: 19 KAEDILRSLS----DRLVNTRPATVLRNGW-KEIPAKDLVPGDVVLVKSGETVPADGVLL 73
Query: 64 SGHSLLIDESSLSGQSEP--RYMYEENPFLL-------AGTKVQGGSGKMLVTTVGMRTE 114
SG S +DES+L+G+S P + +E AGT V GG+ ++VT G+ T
Sbjct: 74 SG-SCFVDESNLTGESNPVLKTALKETQSGTITGDLVFAGTYVFGGTLIVVVTPTGILTT 132
Query: 115 WGKLMETLNEGGEDETPLQVKLNGVATIIGKIELFFSVLE-FLVLIGRFLGEKVIHNEFT 173
G++ + G E TPLQ K + + I + L L FL L R I
Sbjct: 133 VGRIAVVVKTGFETRTPLQSKRDRLENFIFILFLLLLALAVFLYLFIRGWDPNSI----- 187
Query: 174 DWSSADALTLIDYFAVVVTIIDVAVPEGLPLAVTLSLAFAMKKLMNDGALVRHLSACETM 233
L+ V+V + VP LP AVT++LA +L G LVR+L+A E +
Sbjct: 188 ------FKALLRALIVLV----IVVPPALPAAVTVALAVGDARLAKKGILVRNLNALEEL 237
Query: 234 GSASCICTDKTRMLTTNHMVVDKIWIANTISNVEGNNRKDILQSEISERVLDITLQAIFQ 293
G +C+DKT LT N M + ++I +
Sbjct: 238 GKVDYLCSDKTGTLTKNKMTLQGVYIDG------------------------------GK 267
Query: 294 NTGSKVVKDKDGKNSILGTPTESAILEFGLRLGGDFEAQRREFKIVKVEPFNSVRKKMSV 353
S + D N + G P E A+L+ L G + +E+KI+ V PF+SV K+MSV
Sbjct: 268 EDNSSSLVACDN-NYLSGDPMEKALLKS-AELVGKADKGNKEYKILDVFPFSSVLKRMSV 325
Query: 354 LIALPAGGMRAFCKGASEIVLSMCDKVVSDNGEPVPLSEEQFRNITDVINGFASEALRTL 413
++ P G F KGA E +L C E A + LR L
Sbjct: 326 IVETPDGSDLLFVKGAPEFILERC----------NNYEE--------KYLELARQGLRVL 367
Query: 414 CLAFKDLNDSSNENNIPDSGYTLIAVVGIKDPVRPGVKEAVQTCLEAGITVRMVTGDNIN 473
A K+L + + ++ +DP+RP KE ++ AGI V M+TGDN+
Sbjct: 368 AFASKEL----------EDDLEFLGLITFEDPLRPDAKETIEELKAAGIKVVMITGDNVL 417
Query: 474 TARAIAKECGILTSDGEAVEGPEFRNMSPADIIPKLQVMARSLPSDKHTLVTQLRNTFGE 533
TA+AIAKE GI V AR P K +V L+ G
Sbjct: 418 TAKAIAKELGID-------------------------VFARVSPEQKLQIVEALQK-KGH 451
Query: 534 VVAVTGDGTNDASALHEADIGLAMG 558
+VA+TGDG NDA AL +AD+G+AMG
Sbjct: 452 IVAMTGDGVNDAPALKKADVGIAMG 476
|
The P-type ATPases are a large family of trans-membrane transporters acting on charged substances. The distinguishing feature of the family is the formation of a phosphorylated intermediate (aspartyl-phosphate) during the course of the reaction. Another common name for these enzymes is the E1-E2 ATPases based on the two isolable conformations: E1 (unphosphorylated) and E2 (phosphorylated). Generally, P-type ATPases consist of only a single subunit encompassing the ATPase and ion translocation pathway, however, in the case of the potassium (TIGR01497) and sodium/potassium (TIGR01106) varieties, these functions are split between two subunits. Additional small regulatory or stabilizing subunits may also exist in some forms. P-type ATPases are nearly ubiquitous in life and are found in numerous copies in higher organisms (at least 45 in Arabidopsis thaliana, for instance ). Phylogenetic analyses have revealed that the P-type ATPase subfamily is divided up into groups based on substrate specificities and this is represented in the various subfamily and equivalog models that have been made: IA (K+) TIGR01497, IB (heavy metals) TIGR01525, IIA1 (SERCA-type Ca++) TIGR01116, IIA2 (PMR1-type Ca++) TIGR01522, IIB (PMCA-type Ca++) TIGR01517, IIC (Na+/K+, H+/K+ antiporters) TIGR01106, IID (fungal-type Na+ and K+) TIGR01523, IIIA (H+) TIGR01647, IIIB (Mg++) TIGR01524, IV (phospholipid, flippase) TIGR01652 and V (unknown specificity) TIGR01657. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily. Length = 543 |
| >gnl|CDD|130585 TIGR01522, ATPase-IIA2_Ca, golgi membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 301 bits (773), Expect = 3e-92
Identities = 182/563 (32%), Positives = 281/563 (49%), Gaps = 62/563 (11%)
Query: 28 VTRDGQRQKVCTYDLVVGDIVHLSIGDQVPAYGIFISGHSLLIDESSLSGQSEPRY---- 83
+ R+G+ + V LV GD+V LS+GD+VPA + L IDES+L+G++ P
Sbjct: 121 LIREGKLEHVLASTLVPGDLVCLSVGDRVPADLRIVEAVDLSIDESNLTGETTPVSKVTA 180
Query: 84 ---------MYEENPFLLAGTKVQGGSGKMLVTTVGMRTEWGKLMETLNEGGEDETPLQV 134
+ E + GT V+ G GK +V G TE+G + + + + +TPLQ
Sbjct: 181 PIPAATNGDLAERSNIAFMGTLVRCGHGKGIVVGTGSNTEFGAVFKMMQAIEKPKTPLQK 240
Query: 135 KLNGVATIIGKIELFFSVLEFLVLIGRFLGEKVIHNEFTDWSSADALTLIDYFAVVVTII 194
++ + + + F V+ + L+G F G+ DW ++ F + V++
Sbjct: 241 SMDLLGKQLSLVS--FGVIGVICLVGWFQGK--------DW--------LEMFTISVSLA 282
Query: 195 DVAVPEGLPLAVTLSLAFAMKKLMNDGALVRHLSACETMGSASCICTDKTRMLTTNHMVV 254
A+PEGLP+ VT++LA + ++ A+VR L + ET+GS + IC+DKT LT NHM V
Sbjct: 283 VAAIPEGLPIIVTVTLALGVLRMSKKRAIVRKLPSVETLGSVNVICSDKTGTLTKNHMTV 342
Query: 255 DKIWIANTISNV----------EGNNRKDILQSEISERVLDITLQAIFQNTGSKVVKDKD 304
KIW ++ + + E D+L + V I N +K + D
Sbjct: 343 TKIWTSDGLHTMLNAVSLNQFGEVIVDGDVLHGFYTVAVSRILEAGNLCNN-AKFRNEAD 401
Query: 305 GKNSILGTPTESAILEFGLRLGGDFEAQRREFKIVKVEPFNSVRKKMSVLIALPAGGMRA 364
++LG PT+ A++E ++ G + R + V PF+S RK M+V
Sbjct: 402 ---TLLGNPTDVALIELLMKFG--LDDLRETYIRVAEVPFSSERKWMAVKCVHRQDRSEM 456
Query: 365 -FCKGASEIVLSMCDKVVSDNGEPVPLSEEQFRNITDVINGFASEALRTLCLAFKDLNDS 423
F KGA E VL C +G+ + L+++Q I + AS LR + A
Sbjct: 457 CFMKGAYEQVLKYCTYYQKKDGKTLTLTQQQRDVIQEEAAEMASAGLRVIAFASGPEKGQ 516
Query: 424 SNENNIPDSGYTLIAVVGIKDPVRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAKECG 483
T + +VGI DP RPGVKEAV T + G+ + M+TGD+ TA +IA+ G
Sbjct: 517 ----------LTFLGLVGINDPPRPGVKEAVTTLITGGVRIIMITGDSQETAVSIARRLG 566
Query: 484 ILTSDGEAVEGPEFRNMSP---ADIIPKLQVMARSLPSDKHTLVTQLRNTFGEVVAVTGD 540
+ + ++V G + M + I+PK+ V AR+ P K +V L+ G+VVA+TGD
Sbjct: 567 MPSKTSQSVSGEKLDAMDDQQLSQIVPKVAVFARASPEHKMKIVKALQKR-GDVVAMTGD 625
Query: 541 GTNDASALHEADIGLAMGIAGTE 563
G NDA AL ADIG+AMG GT+
Sbjct: 626 GVNDAPALKLADIGVAMGQTGTD 648
|
This model describes the P-type ATPase responsible for translocating calcium ions across the golgi membrane of fungi and animals , and is of particular importance in the sarcoplasmic reticulum of skeletal and cardiac muscle in vertebrates. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116. Length = 884 |
| >gnl|CDD|233277 TIGR01116, ATPase-IIA1_Ca, sarco/endoplasmic reticulum calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 288 bits (738), Expect = 5e-87
Identities = 201/598 (33%), Positives = 290/598 (48%), Gaps = 76/598 (12%)
Query: 28 VTRDGQRQKVCTYDLVVGDIVHLSIGDQVPAYGIFISGHSLLIDESSLSGQSEP------ 81
V RDG+ + DLV GDIV L++GD+VPA +S +L +D+S L+G+S
Sbjct: 77 VLRDGRWSVIKAKDLVPGDIVELAVGDKVPADIRVLSLKTLRVDQSILTGESVSVNKHTE 136
Query: 82 -------RYMYEENPFLLAGTKVQGGSGKMLVTTVGMRTEWGKLMETLNEGGEDETPLQV 134
++N L +GT V G + +V GM TE GK+ + + +++TPLQ
Sbjct: 137 SVPDERAVNQDKKN-MLFSGTLVVAGKARGVVVRTGMSTEIGKIRDEMRAAEQEDTPLQK 195
Query: 135 KLNGVATIIGKIELFFSVLEFLVLIGRFLGEKVIHNEFTDWSSADALTLIDYFAVVVTII 194
KL+ ++ K+ +L +++ IG F I YF + V +
Sbjct: 196 KLDEFGELLSKVIGLICILVWVINIGHFND--------PALGGGWIQGAIYYFKIAVALA 247
Query: 195 DVAVPEGLPLAVTLSLAFAMKKLMNDGALVRHLSACETMGSASCICTDKTRMLTTNHMVV 254
A+PEGLP +T LA +K+ A+VR L + ET+G + IC+DKT LTTN M V
Sbjct: 248 VAAIPEGLPAVITTCLALGTRKMAKKNAIVRKLPSVETLGCTTVICSDKTGTLTTNQMSV 307
Query: 255 DKIWIANTIS-------------NVEGNNRKD--ILQSEISERVLDITLQAIFQNTGSKV 299
K+ + S EG KD + + ++ A N S
Sbjct: 308 CKVVALDPSSSSLNEFCVTGTTYAPEGGVIKDDGPVAGGQDAGLEELATIAALCNDSSLD 367
Query: 300 VKDKDGKNSILGTPTESAILEFGLRLG------GDFEAQRREF-----------KIVKVE 342
++ G +G TE+A+ ++G G +R K+ +E
Sbjct: 368 FNERKGVYEKVGEATEAALKVLVEKMGLPATKNGVSSKRRPALGCNSVWNDKFKKLATLE 427
Query: 343 PFNSVRKKMSVLIALPAGGMRAFCKGASEIVLSMCDKVVSDNGEPVPLSEEQFRNITDVI 402
F+ RK MSVL P+ G + F KGA E VL C +++ +G VPL+++ I VI
Sbjct: 428 -FSRDRKSMSVLCK-PSTGNKLFVKGAPEGVLERCTHILNGDGRAVPLTDKMKNTILSVI 485
Query: 403 NGFAS-EALRTLCLAFKD---------LNDSSNENNIPDSGYTLIAVVGIKDPVRPGVKE 452
+ +ALR L LAFKD L+D +N I +S T I VVG+ DP RP V +
Sbjct: 486 KEMGTTKALRCLALAFKDIPDPREEDLLSDPANFEAI-ESDLTFIGVVGMLDPPRPEVAD 544
Query: 453 AVQTCLEAGITVRMVTGDNINTARAIAKECGILTSD----GEAVEGPEFRNMSPA---DI 505
A++ C AGI V M+TGDN TA AI + GI + D ++ G EF M PA
Sbjct: 545 AIEKCRTAGIRVIMITGDNKETAEAICRRIGIFSPDEDVTFKSFTGREFDEMGPAKQRAA 604
Query: 506 IPKLQVMARSLPSDKHTLVTQLRNTFGEVVAVTGDGTNDASALHEADIGLAMGIAGTE 563
+ +R PS K LV +L GE+VA+TGDG NDA AL +ADIG+AMG +GTE
Sbjct: 605 CRSAVLFSRVEPSHKSELV-ELLQEQGEIVAMTGDGVNDAPALKKADIGIAMG-SGTE 660
|
This model describes the P-type ATPase responsible for translocating calcium ions across the endoplasmic reticulum membrane of eukaryotes , and is of particular importance in the sarcoplasmic reticulum of skeletal and cardiac muscle in vertebrates. These pumps transfer Ca2+ from the cytoplasm to the lumen of the endoplasmic reticulum. In humans and mice, at least, there are multiple isoforms of the SERCA pump with overlapping but not redundant functions. Defects in SERCA isoforms are associated with diseases in humans. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the latter of which is modelled by TIGR01522 [Transport and binding proteins, Cations and iron carrying compounds]. Length = 917 |
| >gnl|CDD|130176 TIGR01106, ATPase-IIC_X-K, sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit | Back alignment and domain information |
|---|
Score = 235 bits (602), Expect = 2e-67
Identities = 190/632 (30%), Positives = 288/632 (45%), Gaps = 101/632 (15%)
Query: 1 MVTAISDYKQSLQFRDLDREKKKIFIQ---VTRDGQRQKVCTYDLVVGDIVHLSIGDQVP 57
++T Y Q + + K + Q V RDG++ + +VVGD+V + GD++P
Sbjct: 115 IITGCFSYYQEAKSSKIMESFKNMVPQQALVIRDGEKMSINAEQVVVGDLVEVKGGDRIP 174
Query: 58 AYGIFISGHSLLIDESSLSGQSEPRY----MYEENPF-----LLAGTKVQGGSGKMLVTT 108
A IS +D SSL+G+SEP+ ENP T G+ + +V
Sbjct: 175 ADLRIISAQGCKVDNSSLTGESEPQTRSPEFTHENPLETRNIAFFSTNCVEGTARGIVVN 234
Query: 109 VGMRTEWGKLMETLNEGGEDE-TPLQVKLNGVATIIGKIELFFSVLEFLVLIGRFLGEKV 167
G RT G++ +L G E+ TP+ +++ II + +F V F++
Sbjct: 235 TGDRTVMGRI-ASLASGLENGKTPIAIEIEHFIHIITGVAVFLGVSFFIL---------- 283
Query: 168 IHNEFTDWSSADALTLIDYFAVVVTIIDVAVPEGLPLAVTLSLAFAMKKLMNDGALVRHL 227
S T ++ ++ II VPEGL VT+ L K++ LV++L
Sbjct: 284 --------SLILGYTWLEAVIFLIGIIVANVPEGLLATVTVCLTLTAKRMARKNCLVKNL 335
Query: 228 SACETMGSASCICTDKTRMLTTNHMVVDKIWIANTISNVEGNNRKDILQSEIS------- 280
A ET+GS S IC+DKT LT N M V +W N I E + +D QS +S
Sbjct: 336 EAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQI--HEADTTED--QSGVSFDKSSAT 391
Query: 281 ----ERVLDITLQAIFQNTGSKVVKDKDGKNSILGTPTESAILEFG-LRLGGDFEAQRRE 335
R+ + +A+F+ V K ++ G +ESA+L+ L LG E + R
Sbjct: 392 WLALSRIAGLCNRAVFKAGQENV---PILKRAVAGDASESALLKCIELCLGSVMEMRERN 448
Query: 336 FKIVKVEPFNSVRK-KMSVLIALPAGGMRAFC--KGASEIVLSMCDKVVSDNGEPVPLSE 392
K+V++ PFNS K ++S+ R KGA E +L C ++ +G+ PL E
Sbjct: 449 PKVVEI-PFNSTNKYQLSIHENEDPRDPRHLLVMKGAPERILERCSSILI-HGKEQPLDE 506
Query: 393 E---QFRNITDVINGFASEALRTLCLAFKDLND---------SSNENNIPDSGYTLIAVV 440
E F+N + G R L L D +++ N P + ++
Sbjct: 507 ELKEAFQNAYLELGGLGE---RVLGFCHLYLPDEQFPEGFQFDTDDVNFPTDNLCFVGLI 563
Query: 441 GIKDPVRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAKECGILTSDGEAVE------- 493
+ DP R V +AV C AGI V MVTGD+ TA+AIAK GI++ E VE
Sbjct: 564 SMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGVGIISEGNETVEDIAARLN 623
Query: 494 -----------------GPEFRNMSPADIIPKLQ-----VMARSLPSDKHTLVTQLRNTF 531
G + ++M+ + L+ V AR+ P K +V +
Sbjct: 624 IPVSQVNPRDAKACVVHGSDLKDMTSEQLDEILKYHTEIVFARTSPQQKLIIVEGCQRQ- 682
Query: 532 GEVVAVTGDGTNDASALHEADIGLAMGIAGTE 563
G +VAVTGDG ND+ AL +ADIG+AMGIAG++
Sbjct: 683 GAIVAVTGDGVNDSPALKKADIGVAMGIAGSD 714
|
This model describes the P-type ATPases responsible for the exchange of either protons or sodium ions for potassium ions across the plasma membranes of eukaryotes. Unlike most other P-type ATPases, members of this subfamily require a beta subunit for activity. This model encompasses eukaryotes and consists of two functional types, a Na/K antiporter found widely distributed in eukaryotes and a H/K antiporter found only in vertebrates. The Na+ or H+/K+ antiporter P-type ATPases have been characterized as Type IIC based on a published phylogenetic analysis. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps [Energy metabolism, ATP-proton motive force interconversion]. Length = 997 |
| >gnl|CDD|236705 PRK10517, PRK10517, magnesium-transporting ATPase MgtA; Provisional | Back alignment and domain information |
|---|
Score = 203 bits (519), Expect = 2e-56
Identities = 167/564 (29%), Positives = 256/564 (45%), Gaps = 90/564 (15%)
Query: 26 IQVTRDGQRQKVCTYDLVVGDIVHLSIGDQVPAYGIFISGHSLLIDESSLSGQSEP---- 81
I + ++ LV GDI+ L+ GD +PA + L + ++SL+G+S P
Sbjct: 167 INDKGENGWLEIPIDQLVPGDIIKLAAGDMIPADLRILQARDLFVAQASLTGESLPVEKF 226
Query: 82 ---RYMYEENPF-----LLAGTKVQGGSGKMLVTTVGMRTEWGKLMETLNEGGEDETPLQ 133
R NP GT V G+ + +V G T +G+L ++E + Q
Sbjct: 227 ATTRQPEHSNPLECDTLCFMGTNVVSGTAQAVVIATGANTWFGQLAGRVSEQDSEPNAFQ 286
Query: 134 VKLNGVATIIGKIELFFSVLEFLVLIGRFLGEKVIHNEFT--DWSSADALTLIDYFAVVV 191
++ V+ ++ + F V+ +VL+ I N +T DW A AL FA
Sbjct: 287 QGISRVSWLLIR---FMLVMAPVVLL--------I-NGYTKGDWWEA-AL-----FA--- 325
Query: 192 TIIDVAV---PEGLPLAVTLSLAFAMKKLMNDGALVRHLSACETMGSASCICTDKTRMLT 248
+ VAV PE LP+ VT +LA KL +V+ L A + G+ +CTDKT LT
Sbjct: 326 --LSVAVGLTPEMLPMIVTSTLARGAVKLSKQKVIVKRLDAIQNFGAMDILCTDKTGTLT 383
Query: 249 TNHMVVDKIWIANTISNVEGNNRKDILQSEISERVLDIT-LQAIFQNTGSKVVKDKDGKN 307
DKI + N ++ G SERVL L + +Q TG K + D
Sbjct: 384 Q-----DKIVLENHT-DISGKT---------SERVLHSAWLNSHYQ-TGLKNLLD----- 422
Query: 308 SILGTPTESAILEFGLRLGGDFEAQRRE---FKIVKVEPFNSVRKKMSVLIALPAGGMRA 364
+A+LE G D E+ R ++ + PF+ R++MSV++A +
Sbjct: 423 --------TAVLE-----GVDEESARSLASRWQKIDEIPFDFERRRMSVVVAENTEHHQL 469
Query: 365 FCKGASEIVLSMCDKVVSDNGEPVPLSEEQFRNITDVINGFASEALRTLCLAFKDLNDSS 424
CKGA E +L++C + V NGE VPL + R I V + + LR + +A K L
Sbjct: 470 ICKGALEEILNVCSQ-VRHNGEIVPLDDIMLRRIKRVTDTLNRQGLRVVAVATKYLPARE 528
Query: 425 NENNIPD-SGYTLIAVVGIKDPVRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAKECG 483
+ D S L + DP + A++ +G+TV+++TGD+ A + E G
Sbjct: 529 GDYQRADESDLILEGYIAFLDPPKETTAPALKALKASGVTVKILTGDSELVAAKVCHEVG 588
Query: 484 ILTSDGEAVEGPEFRNMSP---ADIIPKLQVMARSLPSDKHTLVTQLRNTFGEVVAVTGD 540
+ GE + G + +S A++ + + AR P K +VT L+ G VV GD
Sbjct: 589 L--DAGEVLIGSDIETLSDDELANLAERTTLFARLTPMHKERIVTLLKRE-GHVVGFMGD 645
Query: 541 GTNDASALHEADIGL----AMGIA 560
G NDA AL ADIG+ A+ IA
Sbjct: 646 GINDAPALRAADIGISVDGAVDIA 669
|
Length = 902 |
| >gnl|CDD|233506 TIGR01647, ATPase-IIIA_H, plasma-membrane proton-efflux P-type ATPase | Back alignment and domain information |
|---|
Score = 192 bits (490), Expect = 5e-53
Identities = 136/562 (24%), Positives = 243/562 (43%), Gaps = 95/562 (16%)
Query: 4 AISDYKQSLQFRDLDREKKKIFIQVTRDGQRQKVCTYDLVVGDIVHLSIGDQVPAYGIFI 63
A+ KQSL + +V RDG+ Q++ +LV GD+V L IGD VPA
Sbjct: 82 AVEALKQSLAPK----------ARVLRDGKWQEIPASELVPGDVVRLKIGDIVPADCRLF 131
Query: 64 SGHSLLIDESSLSGQSEPRYMY-EENPFLLAGTKVQGGSGKMLVTTVGMRTEWGKLMETL 122
G + +D+++L+G+S P + + +G+ V+ G + +VT GM T +GK +
Sbjct: 132 EGDYIQVDQAALTGESLPVTKKTGDIAY--SGSTVKQGEAEAVVTATGMNTFFGKAAALV 189
Query: 123 NEGGEDETPLQVKLNGVATIIGKIELFFSVLEFLVLIGRFLGEKVIHNEFTDWSSADALT 182
LQ L+ + + + ++E +VL F +
Sbjct: 190 QSTETGSGHLQKILSKIGLFLIVLIGVLVLIELVVLFFGR------GESFREGLQ----- 238
Query: 183 LIDYFAVVVTIIDVAVPEGLPLAVTLSLAFAMKKLMNDGALVRHLSACETMGSASCICTD 242
FA+V+ + +P +P +++++A +L A+V L+A E + +C+D
Sbjct: 239 ----FALVLLV--GGIPIAMPAVLSVTMAVGAAELAKKKAIVTRLTAIEELAGMDILCSD 292
Query: 243 KTRMLTTNHMVVDKIWIANTISNVEGNNRKDILQSEISERVLDITLQAIFQNTGSKVVKD 302
KT LT N + +D+I G ++ D+L ++ S+
Sbjct: 293 KTGTLTLNKLSIDEILPF-----FNGFDKDDVL---------------LYAALASREEDQ 332
Query: 303 KDGKNSILGTPTESAILEFGLRLGGDFEAQRREFKIVKVEPFNSVRKKMSVLIALPAGGM 362
++LG+ D + R +K+++ PF+ V K+ + P G
Sbjct: 333 DAIDTAVLGSAK-------------DLKEARDGYKVLEFVPFDPVDKRTEATVEDPETGK 379
Query: 363 RAFC-KGASEIVLSMCDKVVSDNGEPVPLSEEQFRNITDVINGFASEALRTLCLAFKDLN 421
R KGA +++L +C DN + + + + ++ AS R L +A D
Sbjct: 380 RFKVTKGAPQVILDLC-----DNKKEIE------EKVEEKVDELASRGYRALGVARTD-- 426
Query: 422 DSSNENNIPDSGYTLIAVVGIKDPVRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAKE 481
E + + ++ + DP R KE ++ G+ V+MVTGD++ A+ A+
Sbjct: 427 ----EEG----RWHFLGLLPLFDPPRHDTKETIERARHLGVEVKMVTGDHLAIAKETARR 478
Query: 482 CG----ILTSDGEAVEGPEFRNMSP---ADIIPKLQVMARSLPSDKHTLVTQLRNTFGEV 534
G I T+D + + R+ P +++ A P K+ +V L+ G +
Sbjct: 479 LGLGTNIYTADV--LLKGDNRDDLPSGLGEMVEDADGFAEVFPEHKYEIVEILQK-RGHL 535
Query: 535 VAVTGDGTNDASALHEADIGLA 556
V +TGDG NDA AL +AD+G+A
Sbjct: 536 VGMTGDGVNDAPALKKADVGIA 557
|
This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast. Length = 754 |
| >gnl|CDD|130587 TIGR01524, ATPase-IIIB_Mg, magnesium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 185 bits (472), Expect = 2e-50
Identities = 149/538 (27%), Positives = 228/538 (42%), Gaps = 75/538 (13%)
Query: 42 LVVGDIVHLSIGDQVPAYGIFISGHSLLIDESSLSGQSEPRYMYEE-------NPF---- 90
LV GD++ L+ GD +PA IS L I++S+L+G+S P + E
Sbjct: 149 LVPGDLIELAAGDIIPADARVISARDLFINQSALTGESLPVEKFVEDKRARDPEILEREN 208
Query: 91 -LLAGTKVQGGSGKMLVTTVGMRTEWGKLMETLNEGGEDETPLQVKLNGVATIIGKIELF 149
GT V G + +V G T +G L E T + V+ ++ + L
Sbjct: 209 LCFMGTNVLSGHAQAVVLATGSSTWFGSLAIAATERRGQ-TAFDKGVKSVSKLLIRFMLV 267
Query: 150 FSVLEFLVLIGRFLGEKVIHNEFT--DWSSADALTLIDYFAVVVTIIDVAVPEGLPLAVT 207
+ ++ N DW A L AV V + PE LP+ V+
Sbjct: 268 MVPVVLMI------------NGLMKGDWLEAFLFAL----AVAVGL----TPEMLPMIVS 307
Query: 208 LSLAFAMKKLMNDGALVRHLSACETMGSASCICTDKTRMLTTNHMVVDKIWIANTISNVE 267
+LA + +V+ LSA + G+ +CTDKT LT DKI + I +
Sbjct: 308 SNLAKGAINMSKKKVIVKELSAIQNFGAMDILCTDKTGTLTQ-----DKIELEKHI-DSS 361
Query: 268 GNNRKDILQSEISERVLDIT-LQAIFQNTGSKVVKDKDGKNSILGTPTESAILEFGLRLG 326
G E SERVL + L + FQ TG K V D A+L
Sbjct: 362 G---------ETSERVLKMAWLNSYFQ-TGWKNVLDH-------------AVLAKLDESA 398
Query: 327 GDFEAQRREFKIVKVEPFNSVRKKMSVLIALPAGGMRAFCKGASEIVLSMCDKVVSDNGE 386
A R +K V PF+ R+++SV++ A R CKGA E +L++C G
Sbjct: 399 ARQTASR--WKKVDEIPFDFDRRRLSVVVENRAEVTRLICKGAVEEMLTVCTH-KRFGGA 455
Query: 387 PVPLSEEQFRNITDVINGFASEALRTLCLAFKDLNDSSNENNIPD-SGYTLIAVVGIKDP 445
V LSE + + D+ + +R + +A K L + D + +G DP
Sbjct: 456 VVTLSESEKSELQDMTAEMNRQGIRVIAVATKTLKVGEADFTKTDEEQLIIEGFLGFLDP 515
Query: 446 VRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAKECGILTSDGEAVEGPEFRNMSPADI 505
+ KEA+ + GI V+++TGDN I +E GI +D + G + +S ++
Sbjct: 516 PKESTKEAIAALFKNGINVKVLTGDNEIVTARICQEVGIDAND--FLLGADIEELSDEEL 573
Query: 506 ---IPKLQVMARSLPSDKHTLVTQLRNTFGEVVAVTGDGTNDASALHEADIGLAMGIA 560
+ K + AR P K ++ L+ G V GDG NDA AL +AD+G+++ A
Sbjct: 574 ARELRKYHIFARLTPMQKSRIIGLLKKA-GHTVGFLGDGINDAPALRKADVGISVDTA 630
|
This model describes the magnesium translocating P-type ATPase found in a limited number of bacterial species and best described in Salmonella typhimurium, which contains two isoforms. These transporters are active in low external Mg2+ concentrations and pump the ion into the cytoplasm. The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis [Transport and binding proteins, Cations and iron carrying compounds]. Length = 867 |
| >gnl|CDD|215733 pfam00122, E1-E2_ATPase, E1-E2 ATPase | Back alignment and domain information |
|---|
Score = 169 bits (431), Expect = 3e-49
Identities = 80/231 (34%), Positives = 116/231 (50%), Gaps = 20/231 (8%)
Query: 2 VTAISDYKQSLQFRDLDREKKKIFIQVTRDGQRQKVCTYDLVVGDIVHLSIGDQVPAYGI 61
+ A +Y+ + L + V RDG+ +++ +LVVGDIV L GD+VPA G
Sbjct: 12 LEAYQEYRARKALKALKKLLPPTAATVIRDGKEEEIPADELVVGDIVLLKPGDRVPADGR 71
Query: 62 FISGHSLLIDESSLSGQSEPRYMYEENPFLLAGTKVQGGSGKMLVTTVGMRTEWGKLMET 121
I G SL +DES+L+G+S P + AGT V G K++VT G TE GK+
Sbjct: 72 IIEG-SLEVDESALTGESLPVEK-SRGDTVFAGTVVLSGELKVIVTATGEDTELGKIARL 129
Query: 122 LNEGGEDETPLQVKLNGVATIIGKIELFFSVLEFLVLIGRFLGEKVIHNEFTDWSSADAL 181
+ E +TPLQ L+ +A I+ I L ++L + LI F G
Sbjct: 130 VEEAKSAKTPLQRLLDKLAKILVPIVLALAIL--VFLIWFFRGG---------------- 171
Query: 182 TLIDYFAVVVTIIDVAVPEGLPLAVTLSLAFAMKKLMNDGALVRHLSACET 232
++ + ++ A PE LPLAV L+LA +L G LV++LSA ET
Sbjct: 172 DFLEALLRALAVLVAACPEALPLAVPLALAVGAGRLAKKGILVKNLSALET 222
|
Length = 222 |
| >gnl|CDD|130586 TIGR01523, ATPase-IID_K-Na, potassium and/or sodium efflux P-type ATPase, fungal-type | Back alignment and domain information |
|---|
Score = 170 bits (433), Expect = 4e-45
Identities = 169/676 (25%), Positives = 261/676 (38%), Gaps = 159/676 (23%)
Query: 27 QVTRDGQRQKVCTYDLVVGDIVHLSIGDQVPAYGIFISGHSLLIDESSLSGQSEPRY--- 83
V R+G+ + ++DLV GDI L GD +PA I + DE+ L+G+S P
Sbjct: 121 HVIRNGKSDAIDSHDLVPGDICLLKTGDTIPADLRLIETKNFDTDEALLTGESLPVIKDA 180
Query: 84 -----MYEENP------FLLAGTKVQGGSGKMLVTTVGMRTEWGKLMETLNEGG------ 126
E+ P + + V G K + + +E G + L G
Sbjct: 181 HATFGKEEDTPIGDRINLAFSSSAVTKGRAKGICIATALNSEIGAIAAGLQGDGGLFQRP 240
Query: 127 -EDETPLQVKLNGVATIIGKIELFFSVLEFLVLIGRFLGEKV---IHNEFTDWSSADALT 182
+D+ + KLN I K+ G FLG V +H + + +
Sbjct: 241 EKDDPNKRRKLN---KWILKVTKKV--------TGAFLGLNVGTPLHRKLSKLA-----V 284
Query: 183 LIDYFAVVVTIIDVA---------------------VPEGLPLAVTLSLAFAMKKLMNDG 221
++ A++ II +A +PE L +++++A +
Sbjct: 285 ILFCIAIIFAIIVMAAHKFDVDKEVAIYAICLAISIIPESLIAVLSITMAMGAANMSKRN 344
Query: 222 ALVRHLSACETMGSASCICTDKTRMLTTNHMVVDKIWIAN---------------TISNV 266
+VR L A E +G+ + IC+DKT +T M+ +IWI NV
Sbjct: 345 VIVRKLDALEALGAVNDICSDKTGTITQGKMIARQIWIPRFGTISIDNSDDAFNPNEGNV 404
Query: 267 EGNNR-------------KDILQSEISERVLDITL--------------QAIFQNTGSKV 299
G R +DIL+ E + + +I L A N +
Sbjct: 405 SGIPRFSPYEYSHNEAADQDILK-EFKDELKEIDLPEDIDMDLFIKLLETAALANIATVF 463
Query: 300 VKDKDGKNSILGTPTESAILEFGLRLGGDFEAQRRE------------------------ 335
D G PTE AI F + A E
Sbjct: 464 KDDATDCWKAHGDPTEIAIHVFAKKFDLPHNALTGEEDLLKSNENDQSSLSQHNEKPGSA 523
Query: 336 -FKIVKVEPFNSVRKKMSVLIALPAG-GMRAFCKGASEIVLSMCDKVVSDNGEPV-PLSE 392
F+ + PF+S K+M+ + G + KGA E ++ C +G + PL +
Sbjct: 524 QFEFIAEFPFDSEIKRMASIYEDNHGETYNIYAKGAFERIIECCSSSNGKDGVKISPLED 583
Query: 393 EQFRNITDVINGFASEALRTLCLAFK-----DLNDSSNEN-----NIPDSGYTLIAVVGI 442
I + A+E LR L A K D ND +N +S + ++GI
Sbjct: 584 CDRELIIANMESLAAEGLRVLAFASKSFDKADNNDDQLKNETLNRATAESDLEFLGLIGI 643
Query: 443 KDPVRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAKECGILTS----------DGEAV 492
DP R AV+ C +AGI V M+TGD TA+AIA+E GI+ D +
Sbjct: 644 YDPPRNESAGAVEKCHQAGINVHMLTGDFPETAKAIAQEVGIIPPNFIHDRDEIMDSMVM 703
Query: 493 EGPEFRNMS--PADIIPKLQ-VMARSLPSDKHTLVTQL--RNTFGEVVAVTGDGTNDASA 547
G +F +S D + L V+AR P K ++ L R F A+TGDG ND+ +
Sbjct: 704 TGSQFDALSDEEVDDLKALCLVIARCAPQTKVKMIEALHRRKAF---CAMTGDGVNDSPS 760
Query: 548 LHEADIGLAMGIAGTE 563
L A++G+AMGI G++
Sbjct: 761 LKMANVGIAMGINGSD 776
|
Initially described as a calcium efflux ATPase , more recent work has shown that the S. pombe CTA3 gene is in fact a potassium ion efflux pump. This model describes the clade of fungal P-type ATPases responsible for potassium and sodium efflux. The degree to which these pumps show preference for sodium or potassium varies. This group of ATPases has been classified by phylogentic analysis as type IID. The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump. Length = 1053 |
| >gnl|CDD|233513 TIGR01657, P-ATPase-V, P-type ATPase of unknown pump specificity (type V) | Back alignment and domain information |
|---|
Score = 168 bits (427), Expect = 3e-44
Identities = 147/655 (22%), Positives = 244/655 (37%), Gaps = 182/655 (27%)
Query: 26 IQVTRDGQRQKVCTYDLVVGDIVHLSIGDQ----VPAYGIFISGHSLLIDESSLSGQSEP 81
+ V R+G+ + + +LV GDIV SI +P + +SG S +++ES L+G+S P
Sbjct: 231 VIVIRNGKWVTIASDELVPGDIV--SIPRPEEKTMPCDSVLLSG-SCIVNESMLTGESVP 287
Query: 82 R---------------YMYEENP--FLLAGTKV------QGGSG-KMLVTTVGMRTEWGK 117
++YE + L GTK+ G +G +V G T G+
Sbjct: 288 VLKFPIPDNGDDDEDLFLYETSKKHVLFGGTKILQIRPYPGDTGCLAIVVRTGFSTSKGQ 347
Query: 118 LMETLNEGGEDETPLQ------VKLNGVATIIGKIELFFSVLEFLVLIGRFLGEKVIHNE 171
L+ ++ + V +IG F + L+ GR LG+ ++
Sbjct: 348 LVRSILYPKPRVFKFYKDSFKFILFLAVLALIG----FIYTIIELIKDGRPLGKIIL--R 401
Query: 172 FTDWSSADALTLIDYFAVVVTIIDVAVPEGLPLAVTLSLAFAMKKLMNDGALVRHLSACE 231
D II + VP LP +++ + ++ +L G
Sbjct: 402 SLD------------------IITIVVPPALPAELSIGINNSLARLKKKGIFCTSPFRIN 443
Query: 232 TMGSASCICTDKTRMLTTNHMVVDKIWIANTISNVEGNNRKDILQSEISERVLDITLQAI 291
G C DKT LT + + + + + GN + +E S IT +A+
Sbjct: 444 FAGKIDVCCFDKTGTLTEDGLDLRGVQG------LSGNQEFLKIVTEDSSLKPSITHKAL 497
Query: 292 FQNTGSKVVKDKDGKNSILGTPTESAILEFGLRLGGDFEAQR------------------ 333
T + K + ++G P + + E G E
Sbjct: 498 --ATCHSLTKLEG---KLVGDPLDKKMFEA---TGWTLEEDDESAEPTSILAVVRTDDPP 549
Query: 334 REFKIVKVEPFNSVRKKMSVLIALP-AGGMRAFCKGASEIVLSMCDKVVSDNGEPVPLSE 392
+E I++ F+S ++MSV+++ AF KGA E + S+C E VP
Sbjct: 550 QELSIIRRFQFSSALQRMSVIVSTNDERSPDAFVKGAPETIQSLCSP------ETVPSDY 603
Query: 393 EQFRNITDVINGFASEALRTLCLAFK-----------DLNDSSNENNIPDSGYTLIAVVG 441
++ V+ + E R L LA+K DL+ + E+N+ T + +
Sbjct: 604 QE------VLKSYTREGYRVLALAYKELPKLTLQKAQDLSRDAVESNL-----TFLGFIV 652
Query: 442 IKDPVRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAKECGIL-------------TSD 488
++P++P KE ++ A I M+TGDN TA +A+ECGI+
Sbjct: 653 FENPLKPDTKEVIKELKRASIRTVMITGDNPLTAVHVARECGIVNPSNTLILAEAEPPES 712
Query: 489 GE----------------------------------------AVEGPEFR---NMSPA-- 503
G+ A+ G F SP
Sbjct: 713 GKPNQIKFEVIDSIPFASTQVEIPYPLGQDSVEDLLASRYHLAMSGKAFAVLQAHSPELL 772
Query: 504 -DIIPKLQVMARSLPSDKHTLVTQLRNTFGEVVAVTGDGTNDASALHEADIGLAM 557
++ V AR P K TLV L+ V + GDG ND AL +AD+G+++
Sbjct: 773 LRLLSHTTVFARMAPDQKETLVELLQK-LDYTVGMCGDGANDCGALKQADVGISL 826
|
These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in. Length = 1054 |
| >gnl|CDD|237914 PRK15122, PRK15122, magnesium-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Score = 153 bits (388), Expect = 3e-39
Identities = 150/566 (26%), Positives = 249/566 (43%), Gaps = 99/566 (17%)
Query: 27 QVTRDGQRQKVCTYDLVVGDIVHLSIGDQVPAYGIFISGHSLLIDESSLSGQSEPRYMYE 86
+ R+++ +LV GDIVHLS GD +PA I L I ++ L+G++ P Y+
Sbjct: 157 HAGAEPVRREIPMRELVPGDIVHLSAGDMIPADVRLIESRDLFISQAVLTGEALPVEKYD 216
Query: 87 ----------------ENPFL------LAGTKVQGGSGKMLVTTVGMRTEWGKLMETLNE 124
E L GT V G+ +V G RT +G L +++
Sbjct: 217 TLGAVAGKSADALADDEGSLLDLPNICFMGTNVVSGTATAVVVATGSRTYFGSLAKSI-V 275
Query: 125 GGEDETPLQVKLNGVATIIGKIELFFSVLEFLVLIGRFLGEKVIHNEFT--DWSSADALT 182
G +T +N V+ ++ I ++ ++LI N FT DW +AL
Sbjct: 276 GTRAQTAFDRGVNSVSWLL--IRFMLVMVPVVLLI----------NGFTKGDWL--EALL 321
Query: 183 LIDYFAVVVTIIDVAV---PEGLPLAVTLSLA---FAMKKLMNDGALVRHLSACETMGSA 236
FA+ V AV PE LP+ V+ +LA AM + +V+ L+A + G+
Sbjct: 322 ----FALAV-----AVGLTPEMLPMIVSSNLAKGAIAMAR---RKVVVKRLNAIQNFGAM 369
Query: 237 SCICTDKTRMLTTNHMVVDKIWIANTISNVEGNNRKDILQSEISERVLDITLQAIFQNTG 296
+CTDKT LT D+I + + + +V G ERVL + F +G
Sbjct: 370 DVLCTDKTGTLTQ-----DRIILEHHL-DVSGRK---------DERVLQLAWLNSFHQSG 414
Query: 297 SKVVKDKDGKNSILGTPTESAILEFGLRLGGDFEAQRREFKIVKVEPFNSVRKKMSVLIA 356
K + D+ A++ F + K+ ++ PF+ VR+++SV++
Sbjct: 415 MKNLMDQ-------------AVVAFAEGNP-EIVKPAGYRKVDEL-PFDFVRRRLSVVVE 459
Query: 357 LPAGGMRAFCKGASEIVLSMCDKVVSDNGEPVPLSEEQFRNITDVINGFASEALRTLCLA 416
G CKGA E +L++ V D PL E + + + + ++ R L +A
Sbjct: 460 DAQGQHLLICKGAVEEMLAVATHV-RDGDTVRPLDEARRERLLALAEAYNADGFRVLLVA 518
Query: 417 FKDL--NDSSNENNIPDS-GYTLIAVVGIKDPVRPGVKEAVQTCLEAGITVRMVTGDN-I 472
+++ +S + + D + + DP + A+ E G+ V+++TGDN I
Sbjct: 519 TREIPGGESRAQYSTADERDLVIRGFLTFLDPPKESAAPAIAALRENGVAVKVLTGDNPI 578
Query: 473 NTARAIAKECGILTSDGEAVEGPEFRNMSPADIIPKLQ---VMARSLPSDKHTLVTQLRN 529
TA+ I +E G+ GE + G E M A + +++ V A+ P K ++ L+
Sbjct: 579 VTAK-ICREVGL--EPGEPLLGTEIEAMDDAALAREVEERTVFAKLTPLQKSRVLKALQA 635
Query: 530 TFGEVVAVTGDGTNDASALHEADIGL 555
G V GDG NDA AL +AD+G+
Sbjct: 636 N-GHTVGFLGDGINDAPALRDADVGI 660
|
Length = 903 |
| >gnl|CDD|233509 TIGR01652, ATPase-Plipid, phospholipid-translocating P-type ATPase, flippase | Back alignment and domain information |
|---|
Score = 117 bits (294), Expect = 2e-27
Identities = 102/468 (21%), Positives = 172/468 (36%), Gaps = 139/468 (29%)
Query: 221 GALVRHLSACETMGSASCICTDKTRMLTTNHMVVDKIWIA-----NTISNVEGNNRKDIL 275
A VR + E +G I +DKT LT N M K IA + + ++ R+ +
Sbjct: 344 PASVRTSNLNEELGQVEYIFSDKTGTLTQNIMEFKKCSIAGVSYGDGFTEIKDGIRERLG 403
Query: 276 QSEISERVLDITLQAIFQNTGSKVVKDKDGK----------------NSIL--------- 310
+E + + + V K K ++++
Sbjct: 404 SYVENENSMLVESKGFTFVDPRLVDLLKTNKPNAKRINEFFLALALCHTVVPEFNDDGPE 463
Query: 311 ------GTPTESAILEFGLRLGGDFE--------------AQRREFKIVKVEPFNSVRKK 350
+P E+A+++ +G F + +E++I+ V FNS RK+
Sbjct: 464 EITYQAASPDEAALVKAARDVGFVFFERTPKSISLLIEMHGETKEYEILNVLEFNSDRKR 523
Query: 351 MSVLIALPAGGMRAFCKGASEIVLSMCDKVVSDNGEPV--PLSEEQFRNITDVINGFASE 408
MSV++ P G ++ CKGA ++ K +S G V E + +ASE
Sbjct: 524 MSVIVRNPDGRIKLLCKGADTVIF----KRLSSGGNQVNEETKEH--------LENYASE 571
Query: 409 ALRTLCLAFKDLNDSS----NEN-------------------NIPDSGYTLIAVVGIKDP 445
LRTLC+A+++L++ NE + L+ I+D
Sbjct: 572 GLRTLCIAYRELSEEEYEEWNEEYNEASTALTDREEKLDVVAESIEKDLILLGATAIEDK 631
Query: 446 VRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAKECGIL---------TSDGEAVEGPE 496
++ GV E ++ +AGI + ++TGD + TA I C +L TSD
Sbjct: 632 LQEGVPETIELLRQAGIKIWVLTGDKVETAINIGYSCRLLSRNMEQIVITSDSLDATRSV 691
Query: 497 FRNMSPAD------------------II----------PKLQVM-------------ARS 515
+ +I +L+ R
Sbjct: 692 EAAIKFGLEGTSEEFNNLGDSGNVALVIDGKSLGYALDEELEKEFLQLALKCKAVICCRV 751
Query: 516 LPSDKHTLVTQLRNTFGEVVAVTGDGTNDASALHEADIGLAMGIAGTE 563
PS K +V ++ + G+ GDG ND S + EAD+G+ GI+G E
Sbjct: 752 SPSQKADVVRLVKKSTGKTTLAIGDGANDVSMIQEADVGV--GISGKE 797
|
This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes. Length = 1057 |
| >gnl|CDD|222006 pfam13246, Hydrolase_like2, Putative hydrolase of sodium-potassium ATPase alpha subunit | Back alignment and domain information |
|---|
Score = 97.7 bits (244), Expect = 1e-24
Identities = 34/88 (38%), Positives = 44/88 (50%), Gaps = 1/88 (1%)
Query: 294 NTGSKVVKDKDGKNSILGTPTESAILEFGLRLGGDFEAQRREFKIVKVEPFNSVRKKMSV 353
N ++ I+G PTESA+L F +LG D E R + V PFNS RK+MS
Sbjct: 4 NDAKFGENEEKNGGEIIGDPTESALLVFAEKLGIDVEELRARYPRVAEIPFNSERKRMST 63
Query: 354 LIALPA-GGMRAFCKGASEIVLSMCDKV 380
+ L G R F KGA E +L C +
Sbjct: 64 VHKLEDDDGYRLFVKGAPERILERCSTI 91
|
This is a putative hydrolase of the sodium-potassium ATPase alpha subunit. Length = 91 |
| >gnl|CDD|225127 COG2217, ZntA, Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Score = 98.4 bits (246), Expect = 1e-21
Identities = 52/129 (40%), Positives = 67/129 (51%), Gaps = 26/129 (20%)
Query: 435 TLIAVVGIKDPVRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAKECGILTSDGEAVEG 494
L+ V+ + D +RP KEA+ GI V M+TGDN TA AIAKE GI
Sbjct: 527 KLVGVIALADELRPDAKEAIAALKALGIKVVMLTGDNRRTAEAIAKELGI---------- 576
Query: 495 PEFRNMSPADIIPKLQVMARSLPSDKHTLVTQLRNTFGEVVAVTGDGTNDASALHEADIG 554
+V A LP DK +V +L+ G VA+ GDG NDA AL AD+G
Sbjct: 577 --------------DEVRAELLPEDKAEIVRELQAE-GRKVAMVGDGINDAPALAAADVG 621
Query: 555 LAMGIAGTE 563
+AMG +GT+
Sbjct: 622 IAMG-SGTD 629
|
Length = 713 |
| >gnl|CDD|233445 TIGR01511, ATPase-IB1_Cu, copper-(or silver)-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 91.2 bits (227), Expect = 3e-19
Identities = 69/250 (27%), Positives = 99/250 (39%), Gaps = 63/250 (25%)
Query: 335 EFKIVKVEPFNSVRKK--MSVLIALPAGGMRAFCKGASEIVLSMCDKVVSDNGEPVPLSE 392
+ + V F + +++ AL AG SE L+ +
Sbjct: 299 KPTVTDVHVFGESDRDELLALAAALEAG---------SEHPLAKAIVSYAKAKGITLSQV 349
Query: 393 EQFRNITDVINGFASEAL---RTLCLAFKDLNDSSNENNIPDSGY--------------- 434
F+ I G E T+ L + L EN + G
Sbjct: 350 SDFKAIP----GIGVEGTVEGHTIQLGNEKL---LGENGLKTDGEVEEGGGTTSVLVAVN 402
Query: 435 -TLIAVVGIKDPVRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAKECGILTSDGEAVE 493
L V+ + D ++P KE +Q GI M+TGDN TA+A+AKE GI
Sbjct: 403 GELAGVLALADQLKPEAKEVIQALKRRGIEPVMLTGDNRKTAKAVAKELGIEN------- 455
Query: 494 GPEFRNMSPADIIPKLQVMARSLPSDKHTLVTQLRNTFGEVVAVTGDGTNDASALHEADI 553
V A LP DK L+ +L+ G+VVA+ GDG NDA AL +AD+
Sbjct: 456 -----------------VRAEVLPDDKAALIKKLQEK-GKVVAMVGDGINDAPALAQADV 497
Query: 554 GLAMGIAGTE 563
G+A+G AGT+
Sbjct: 498 GIAIG-AGTD 506
|
This model describes the P-type ATPase primarily responsible for translocating copper ions accross biological membranes. These transporters are found in prokaryotes and eukaryotes. This model encompasses those species which pump copper ions out of cells or organelles (efflux pumps such as CopA of Escherichia coli ) as well as those which pump the ion into cells or organelles either for the purpose of supporting life in extremely low-copper environments (for example CopA of Enterococcus hirae ) or for the specific delivery of copper to a biological complex for which it is a necessary component (for example FixI of Bradyrhizobium japonicum, or CtaA and PacS of Synechocystis). The substrate specificity of these transporters may, to a varying degree, include silver ions (for example, CopA from Archaeoglobus fulgidus). Copper transporters from this family are well known as the genes which are mutated in two human disorders of copper metabolism, Wilson's and Menkes' diseases. The sequences contributing to the seed of this model are all experimentally characterized. The copper P-type ATPases have been characterized as Type IB based on a phylogenetic analysis which combines the copper-translocating ATPases with the cadmium-translocating species. This model and that describing the cadmium-ATPases (TIGR01512) are well separated, and thus we further type the copper-ATPases as IB1 (and the cadmium-ATPases as IB2). Several sequences which have not been characterized experimentally fall just below the cutoffs for both of these models. A sequence from Enterococcus faecalis scores very high against this model, but yet is annotated as an "H+/K+ exchanging ATPase". BLAST of this sequence does not hit anything else annotated in this way. This error may come from the characterization paper published in 1987. Accession GP|7415611 from Saccharomyces cerevisiae appears to be mis-annotated as a cadmium resistance protein. Accession OMNI|NTL01HS00542 from Halobacterium which scores above trusted for this model is annotated as "molybdenum-binding protein" although no evidence can be found for this classification [Cellular processes, Detoxification, Transport and binding proteins, Cations and iron carrying compounds]. Length = 572 |
| >gnl|CDD|225127 COG2217, ZntA, Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Score = 83.8 bits (208), Expect = 7e-17
Identities = 61/238 (25%), Positives = 101/238 (42%), Gaps = 27/238 (11%)
Query: 28 VTRDGQRQKVCTYDLVVGDIVHLSIGDQVPAYGIFISGHSLLIDESSLSGQSEPRYMYEE 87
V DG+ ++V ++ VGDIV + G+++P G+ +SG S +DES L+G+S P
Sbjct: 216 VRGDGEEEEVPVEEVQVGDIVLVRPGERIPVDGVVVSGSSS-VDESMLTGESLPVEKKPG 274
Query: 88 NPFLLAGTKVQGGSGKMLVTTVGMRTEWGKLMETLNEGGEDETPLQVKLNGVATIIGKIE 147
+ + AGT GS + VT VG T +++ + E + P+Q + ++
Sbjct: 275 DE-VFAGTVNLDGSLTIRVTRVGADTTLARIIRLVEEAQSSKAPIQ-------RLADRVA 326
Query: 148 LFFS----VLEFLVLIGRFLGEKVIHNEFTDWSSADALTLIDYFAVVVTIIDVAVPEGLP 203
+F V+ L L F AL Y A+ V +I A P L
Sbjct: 327 SYFVPVVLVIAALTFALWPL--------FGGGDWETAL----YRALAVLVI--ACPCALG 372
Query: 204 LAVTLSLAFAMKKLMNDGALVRHLSACETMGSASCICTDKTRMLTTNHMVVDKIWIAN 261
LA ++ + + G L++ A E + + DKT LT V + +
Sbjct: 373 LATPTAILVGIGRAARRGILIKGGEALERLAKVDTVVFDKTGTLTEGKPEVTDVVALD 430
|
Length = 713 |
| >gnl|CDD|233447 TIGR01525, ATPase-IB_hvy, heavy metal translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 81.1 bits (201), Expect = 4e-16
Identities = 50/130 (38%), Positives = 69/130 (53%), Gaps = 27/130 (20%)
Query: 435 TLIAVVGIKDPVRPGVKEAVQTCLEAG-ITVRMVTGDNINTARAIAKECGILTSDGEAVE 493
L+ V+ ++D +RP KEA+ AG I + M+TGDN + A A+A E GI
Sbjct: 374 ELLGVIALRDQLRPEAKEAIAALKRAGGIKLVMLTGDNRSAAEAVAAELGID-------- 425
Query: 494 GPEFRNMSPADIIPKLQVMARSLPSDKHTLVTQLRNTFGEVVAVTGDGTNDASALHEADI 553
+V A LP DK +V +L+ G VVA+ GDG NDA AL AD+
Sbjct: 426 ----------------EVHAELLPEDKLAIVKELQEE-GGVVAMVGDGINDAPALAAADV 468
Query: 554 GLAMGIAGTE 563
G+AMG AG++
Sbjct: 469 GIAMG-AGSD 477
|
This model encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512. Length = 556 |
| >gnl|CDD|233447 TIGR01525, ATPase-IB_hvy, heavy metal translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 80.7 bits (200), Expect = 5e-16
Identities = 69/240 (28%), Positives = 111/240 (46%), Gaps = 22/240 (9%)
Query: 28 VTRDGQRQKVCTYDLVVGDIVHLSIGDQVPAYGIFISGHSLLIDESSLSGQSEPRYMYEE 87
+ DG ++V +L VGDIV + G+++P G+ ISG S +DES+L+G+S P E
Sbjct: 60 LQGDGSEEEVPVEELQVGDIVIVRPGERIPVDGVVISGESE-VDESALTGESMPVEKKEG 118
Query: 88 NPFLLAGTKVQGGSGKMLVTTVGMRTEWGKLMETLNEGGEDETPLQVKLNGVATIIGKIE 147
+ + AGT GS + VT +G + +++E + E + P+Q + +A+
Sbjct: 119 DE-VFAGTINGDGSLTIRVTKLGEDSTLAQIVELVEEAQSSKAPIQRLADRIASYYVPAV 177
Query: 148 LFFSVLEFLVLIGRFLGEKVIHNEFTDWSSADALTLIDYFAVVVTIIDVAVPEGLPLAVT 207
L ++L F+V LG + AL Y A+ V + VA P L LA
Sbjct: 178 LAIALLTFVV--WLALG------------ALGAL----YRALAVLV--VACPCALGLATP 217
Query: 208 LSLAFAMKKLMNDGALVRHLSACETMGSASCICTDKTRMLTTNHMVVDKIWIANTISNVE 267
+++ A+ G L++ A E + + DKT LTT V I + S E
Sbjct: 218 VAILVAIGVAARRGILIKGGDALEKLAKVKTVVFDKTGTLTTGKPTVVDIEPLDDASISE 277
|
This model encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512. Length = 556 |
| >gnl|CDD|225126 COG2216, KdpB, High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Score = 80.8 bits (200), Expect = 5e-16
Identities = 47/122 (38%), Positives = 65/122 (53%), Gaps = 25/122 (20%)
Query: 436 LIAVVGIKDPVRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAKECGILTSDGEAVEGP 495
++ V+ +KD V+PG+KE + GI M+TGDN TA AIA E G+ D
Sbjct: 438 ILGVIYLKDIVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEAGV---DD------ 488
Query: 496 EFRNMSPADIIPKLQVMARSLPSDKHTLVTQLRNTFGEVVAVTGDGTNDASALHEADIGL 555
+A + P DK L+ Q + G +VA+TGDGTNDA AL +AD+G+
Sbjct: 489 ---------------FIAEATPEDKLALIRQEQAE-GRLVAMTGDGTNDAPALAQADVGV 532
Query: 556 AM 557
AM
Sbjct: 533 AM 534
|
Length = 681 |
| >gnl|CDD|211664 TIGR01512, ATPase-IB2_Cd, heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 78.1 bits (193), Expect = 3e-15
Identities = 44/130 (33%), Positives = 60/130 (46%), Gaps = 26/130 (20%)
Query: 435 TLIAVVGIKDPVRPGVKEAVQTCLEAGIT-VRMVTGDNINTARAIAKECGILTSDGEAVE 493
T + + + D RP EA+ GI V M+TGD A +A+E GI
Sbjct: 352 TYLGYILLSDEPRPDAAEAIAELKALGIEKVVMLTGDRRAVAERVARELGID-------- 403
Query: 494 GPEFRNMSPADIIPKLQVMARSLPSDKHTLVTQLRNTFGEVVAVTGDGTNDASALHEADI 553
+V A LP DK +V +LR VA+ GDG NDA AL AD+
Sbjct: 404 ----------------EVHAELLPEDKLEIVKELR-EKYGPVAMVGDGINDAPALAAADV 446
Query: 554 GLAMGIAGTE 563
G+AMG +G++
Sbjct: 447 GIAMGASGSD 456
|
This model describes the P-type ATPase primarily responsible for translocating cadmium ions (and other closely-related divalent heavy metals such as cobalt, mercury, lead and zinc) across biological membranes. These transporters are found in prokaryotes and plants. Experimentally characterized members of the seed alignment include: SP|P37617 from E. coli, SP|Q10866 from Mycobacterium tuberculosis and SP|Q59998 from Synechocystis PCC6803. The cadmium P-type ATPases have been characterized as Type IB based on a phylogenetic analysis which combines the copper-translocating ATPases with the cadmium-translocating species. This model and that describing the copper-ATPases (TIGR01511) are well separated, and thus we further type the copper-ATPases as IB1 and the cadmium-ATPases as IB2. Several sequences which have not been characterized experimentally fall just below trusted cutoff for both of these models (SP|Q9CCL1 from Mycobacterium leprae, GP|13816263 from Sulfolobus solfataricus, OMNI|NTL01CJ01098 from Campylobacter jejuni, OMNI|NTL01HS01687 from Halobacterium sp., GP|6899169 from Ureaplasma urealyticum and OMNI|HP1503 from Helicobacter pylori) [Transport and binding proteins, Cations and iron carrying compounds]. Length = 536 |
| >gnl|CDD|234905 PRK01122, PRK01122, potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Score = 77.2 bits (191), Expect = 8e-15
Identities = 48/119 (40%), Positives = 65/119 (54%), Gaps = 25/119 (21%)
Query: 439 VVGIKDPVRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAKECGILTSDGEAVEGPEFR 498
V+ +KD V+PG+KE + GI M+TGDN TA AIA E G+ D +F
Sbjct: 439 VIYLKDIVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEAGV---D-------DF- 487
Query: 499 NMSPADIIPKLQVMARSLPSDKHTLVTQLRNTFGEVVAVTGDGTNDASALHEADIGLAM 557
+A + P DK L+ Q + G +VA+TGDGTNDA AL +AD+G+AM
Sbjct: 488 -------------LAEATPEDKLALIRQEQAE-GRLVAMTGDGTNDAPALAQADVGVAM 532
|
Length = 679 |
| >gnl|CDD|182635 PRK10671, copA, copper exporting ATPase; Provisional | Back alignment and domain information |
|---|
Score = 76.7 bits (189), Expect = 1e-14
Identities = 46/123 (37%), Positives = 64/123 (52%), Gaps = 25/123 (20%)
Query: 436 LIAVVGIKDPVRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAKECGILTSDGEAVEGP 495
A++ I+DP+R A+Q +AG + M+TGDN TA AIAKE GI
Sbjct: 641 AAALLAIRDPLRSDSVAALQRLHKAGYRLVMLTGDNPTTANAIAKEAGI----------- 689
Query: 496 EFRNMSPADIIPKLQVMARSLPSDKHTLVTQLRNTFGEVVAVTGDGTNDASALHEADIGL 555
+V+A LP K + +L++ G VA+ GDG NDA AL +AD+G+
Sbjct: 690 -------------DEVIAGVLPDGKAEAIKRLQSQ-GRQVAMVGDGINDAPALAQADVGI 735
Query: 556 AMG 558
AMG
Sbjct: 736 AMG 738
|
Length = 834 |
| >gnl|CDD|215623 PLN03190, PLN03190, aminophospholipid translocase; Provisional | Back alignment and domain information |
|---|
Score = 76.5 bits (188), Expect = 2e-14
Identities = 50/184 (27%), Positives = 88/184 (47%), Gaps = 34/184 (18%)
Query: 328 DFEAQRREFKIVKVEPFNSVRKKMSVLIALPAGGMRAFCKGASEIVLSMCDKVVSDNGEP 387
D +R+ F ++ + F+S RK+MSV++ P ++ F KGA + S+ D+ S N
Sbjct: 595 DIHGERQRFNVLGLHEFDSDRKRMSVILGCPDKTVKVFVKGADTSMFSVIDR--SLNMNV 652
Query: 388 VPLSEEQFRNITDVINGFASEALRTLCLAFKDLNDSSNE--------------------- 426
+ +E ++S LRTL + ++LNDS E
Sbjct: 653 IRATEAHLHT-------YSSLGLRTLVVGMRELNDSEFEQWHFSFEAASTALIGRAALLR 705
Query: 427 ---NNIPDSGYTLIAVVGIKDPVRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAKECG 483
+N+ ++ T++ I+D ++ GV EA+++ AGI V ++TGD TA +I
Sbjct: 706 KVASNVENN-LTILGASAIEDKLQQGVPEAIESLRTAGIKVWVLTGDKQETAISIGYSSK 764
Query: 484 ILTS 487
+LT+
Sbjct: 765 LLTN 768
|
Length = 1178 |
| >gnl|CDD|130561 TIGR01497, kdpB, K+-transporting ATPase, B subunit | Back alignment and domain information |
|---|
Score = 74.1 bits (182), Expect = 7e-14
Identities = 48/128 (37%), Positives = 68/128 (53%), Gaps = 26/128 (20%)
Query: 436 LIAVVGIKDPVRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAKECGILTSDGEAVEGP 495
+ V+ +KD V+ G+KE + GI M+TGDN TA AIA E G+ D
Sbjct: 437 IYGVIYLKDIVKGGIKERFAQLRKMGIKTIMITGDNRLTAAAIAAEAGV---DD------ 487
Query: 496 EFRNMSPADIIPKLQVMARSLPSDKHTLVTQLRNTFGEVVAVTGDGTNDASALHEADIGL 555
+A + P DK L+ Q + G++VA+TGDGTNDA AL +AD+G+
Sbjct: 488 ---------------FIAEATPEDKIALIRQEQAE-GKLVAMTGDGTNDAPALAQADVGV 531
Query: 556 AMGIAGTE 563
AM +GT+
Sbjct: 532 AMN-SGTQ 538
|
This model describes the P-type ATPase subunit of the complex responsible for translocating potassium ions across biological membranes in microbes. In E. coli and other species, this complex consists of the proteins KdpA, KdpB, KdpC and KdpF. KdpB is the ATPase subunit, while KdpA is the potassium-ion translocating subunit. The function of KdpC is unclear, although cit has been suggested to couple the ATPase subunit to the ion-translocating subunit , while KdpF serves to stabilize the complex. The potassium P-type ATPases have been characterized as Type IA based on a phylogenetic analysis which places this clade closest to the heavy-metal translocating ATPases (Type IB). Others place this clade closer to the Na+/K+ antiporter type (Type IIC) based on physical characteristics. This model is very clear-cut, with a strong break between trusted hits and noise. All members of the seed alignment, from Clostridium, Anabaena and E. coli are in the characterized table. One sequence above trusted, OMNI|NTL01TA01282, is apparently mis-annotated in the primary literature, but properly annotated by TIGR [Transport and binding proteins, Cations and iron carrying compounds]. Length = 675 |
| >gnl|CDD|236827 PRK11033, zntA, zinc/cadmium/mercury/lead-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Score = 72.7 bits (179), Expect = 2e-13
Identities = 43/131 (32%), Positives = 62/131 (47%), Gaps = 28/131 (21%)
Query: 433 GYTLIAVVGIKDPVRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAKECGILTSDGEAV 492
++ ++ ++D +R ++A+ GI M+TGDN A AIA E GI
Sbjct: 556 NDDVLGLIALQDTLRADARQAISELKALGIKGVMLTGDNPRAAAAIAGELGI-------- 607
Query: 493 EGPEFRNMSPADIIPKLQVMARSLPSDKHTLVTQLRNTFGEVVAVTGDGTNDASALHEAD 552
+FR A LP DK VT+L +A+ GDG NDA A+ A
Sbjct: 608 ---DFR--------------AGLLPEDKVKAVTELNQH--APLAMVGDGINDAPAMKAAS 648
Query: 553 IGLAMGIAGTE 563
IG+AMG +GT+
Sbjct: 649 IGIAMG-SGTD 658
|
Length = 741 |
| >gnl|CDD|184448 PRK14010, PRK14010, potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Score = 71.7 bits (175), Expect = 5e-13
Identities = 117/534 (21%), Positives = 213/534 (39%), Gaps = 116/534 (21%)
Query: 27 QVTRDGQRQKVCTYDLVVGDIVHLSIGDQVPAYGIFISGHSLLIDESSLSGQSEPRYMYE 86
++ +DG + + DL G IV ++ G+Q+P G I G + +DES+++G+S P
Sbjct: 108 RIKQDGSYEMIDASDLKKGHIVRVATGEQIPNDGKVIKGLA-TVDESAITGESAPVIKES 166
Query: 87 ENPF--LLAGTKVQGGSGKMLVTTVGMRTEWGKLMETLNEGGEDETPLQVKLNGVATIIG 144
F ++ GT V ++ +T+ + K++ + +TP ++ L ++
Sbjct: 167 GGDFDNVIGGTSVASDWLEVEITSEPGHSFLDKMIGLVEGATRKKTPNEIAL--FTLLMT 224
Query: 145 KIELFFSVLEFLVLIGRFLGEKVIHNEFTDWSSADALTLIDYFAVVVTIIDVAVPEGLPL 204
+F V+ + + +FL F L++ A+ V +I + GL
Sbjct: 225 LTIIFLVVILTMYPLAKFL-------NFN-------LSIAMLIALAVCLIPTTI-GGLLS 269
Query: 205 AVTLSLAFAMKKLMNDGALVRHLSACETMGSASCICTDKTRMLT-TNHMVVDKIWIANTI 263
A+ ++ M ++ L + + ET G + + DKT +T N M I + ++
Sbjct: 270 AIGIA---GMDRVTQFNILAKSGRSVETCGDVNVLILDKTGTITYGNRMADAFIPVKSS- 325
Query: 264 SNVEGNNRKDILQSEISERVLDITLQAIFQNTGSKVVKDKDGKNSILGTPTESAILEFGL 323
ER++ ++ + TP +I++
Sbjct: 326 ---------------SFERLVKAAYESSIADD----------------TPEGRSIVKLAY 354
Query: 324 RLGGDFEAQRREFKIVKVEPFNSVRKKMSVLIALPAGGMRAFCKGASEIVLSMCDKVVSD 383
+ D + E+ PF + + V R KGA ++ K V +
Sbjct: 355 KQHIDLPQEVGEYI-----PFTAETRMSGVKFT-----TREVYKGAPNSMV----KRVKE 400
Query: 384 NGEPVPLSEEQFRNITDVINGFASEALRTLCLAFKDLNDSSNENNIPDSGYTLIAVVGIK 443
G +P ++ ++ G + + L + E+N ++ V+ +K
Sbjct: 401 AGGHIP------VDLDALVKGVSKKGGTPLVVL---------EDNE------ILGVIYLK 439
Query: 444 DPVRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAKECGILTSDGEAVEGPEFRNMSPA 503
D ++ G+ E + E GI M TGDN TA IAKE G+
Sbjct: 440 DVIKDGLVERFRELREMGIETVMCTGDNELTAATIAKEAGV------------------- 480
Query: 504 DIIPKLQVMARSLPSDKHTLVTQLRNTFGEVVAVTGDGTNDASALHEADIGLAM 557
+ +A P DK ++ + G +VA+TGDGTNDA AL EA++GLAM
Sbjct: 481 -----DRFVAECKPEDKINVIRE-EQAKGHIVAMTGDGTNDAPALAEANVGLAM 528
|
Length = 673 |
| >gnl|CDD|233445 TIGR01511, ATPase-IB1_Cu, copper-(or silver)-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 70.0 bits (172), Expect = 1e-12
Identities = 61/230 (26%), Positives = 101/230 (43%), Gaps = 20/230 (8%)
Query: 28 VTRDGQRQKVCTYDLVVGDIVHLSIGDQVPAYGIFISGHSLLIDESSLSGQSEPRYMYEE 87
+T DG+ ++V L GDIV + G+++P G I G S +DES ++G+S P
Sbjct: 96 LTDDGEIEEVPVELLQPGDIVRVLPGEKIPVDGTVIEGES-EVDESLVTGESLPVPKKVG 154
Query: 88 NPFLLAGTKVQGGSGKMLVTTVGMRTEWGKLMETLNEGGEDETPLQVKLNGVATIIGKIE 147
+P ++AGT GS + T G T +++ + + + + P+Q + VA +
Sbjct: 155 DP-VIAGTVNGTGSLVVRATATGEDTTLAQIVRLVRQAQQSKAPIQRLADKVAGYFVPVV 213
Query: 148 LFFSVLEFLVLIGRFLGEKVIHNEFTDWSSADALTLIDYFAVVVTIIDVAVPEGLPLAVT 207
+ +++ F++ + LG AL AV V II A P L LA
Sbjct: 214 IAIALITFVIWL--ILGADF----------VFALE----VAVTVLII--ACPCALGLATP 255
Query: 208 LSLAFAMKKLMNDGALVRHLSACETMGSASCICTDKTRMLTTNHMVVDKI 257
+A A +G L++ A E + + DKT LT V +
Sbjct: 256 TVIAVATGLAAKNGVLIKDGDALERAANIDTVVFDKTGTLTQGKPTVTDV 305
|
This model describes the P-type ATPase primarily responsible for translocating copper ions accross biological membranes. These transporters are found in prokaryotes and eukaryotes. This model encompasses those species which pump copper ions out of cells or organelles (efflux pumps such as CopA of Escherichia coli ) as well as those which pump the ion into cells or organelles either for the purpose of supporting life in extremely low-copper environments (for example CopA of Enterococcus hirae ) or for the specific delivery of copper to a biological complex for which it is a necessary component (for example FixI of Bradyrhizobium japonicum, or CtaA and PacS of Synechocystis). The substrate specificity of these transporters may, to a varying degree, include silver ions (for example, CopA from Archaeoglobus fulgidus). Copper transporters from this family are well known as the genes which are mutated in two human disorders of copper metabolism, Wilson's and Menkes' diseases. The sequences contributing to the seed of this model are all experimentally characterized. The copper P-type ATPases have been characterized as Type IB based on a phylogenetic analysis which combines the copper-translocating ATPases with the cadmium-translocating species. This model and that describing the cadmium-ATPases (TIGR01512) are well separated, and thus we further type the copper-ATPases as IB1 (and the cadmium-ATPases as IB2). Several sequences which have not been characterized experimentally fall just below the cutoffs for both of these models. A sequence from Enterococcus faecalis scores very high against this model, but yet is annotated as an "H+/K+ exchanging ATPase". BLAST of this sequence does not hit anything else annotated in this way. This error may come from the characterization paper published in 1987. Accession GP|7415611 from Saccharomyces cerevisiae appears to be mis-annotated as a cadmium resistance protein. Accession OMNI|NTL01HS00542 from Halobacterium which scores above trusted for this model is annotated as "molybdenum-binding protein" although no evidence can be found for this classification [Cellular processes, Detoxification, Transport and binding proteins, Cations and iron carrying compounds]. Length = 572 |
| >gnl|CDD|211664 TIGR01512, ATPase-IB2_Cd, heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 69.3 bits (170), Expect = 2e-12
Identities = 55/233 (23%), Positives = 100/233 (42%), Gaps = 25/233 (10%)
Query: 27 QVTRDGQRQKVCTYDLVVGDIVHLSIGDQVPAYGIFISGHSLLIDESSLSGQSEPRYMYE 86
+V R G ++V +L VGD+V + G++VP G+ +SG S +DES+L+G+S P E
Sbjct: 58 RVLRGGSLEEVAVEELKVGDVVVVKPGERVPVDGVVLSGTS-TVDESALTGESVP---VE 113
Query: 87 ENP--FLLAGTKVQGGSGKMLVTTVGMRTEWGKLMETLNEGGEDETPLQVKLNGVATIIG 144
+ P + AG G ++VT + + K++ + E + Q I
Sbjct: 114 KAPGDEVFAGAINLDGVLTIVVTKLPADSTIAKIVNLVEEAQSRKAKTQ-------RFID 166
Query: 145 KIELFFSVLEFLVLIGRFLGEKVIHNEFTDWSSADALTLIDYFAVVVTIIDVAVPEGLPL 204
+ +++ + L + ++ W Y A+V+ + VA P L +
Sbjct: 167 RFARYYTPV-VLAIALAIW---LVPGLLKRWPFW------VYRALVLLV--VASPCALVI 214
Query: 205 AVTLSLAFAMKKLMNDGALVRHLSACETMGSASCICTDKTRMLTTNHMVVDKI 257
+ + A+ G L++ +A E + + DKT LTT V +
Sbjct: 215 SAPAAYLSAISAAARHGILIKGGAALEALAKIKTVAFDKTGTLTTGRPKVVDV 267
|
This model describes the P-type ATPase primarily responsible for translocating cadmium ions (and other closely-related divalent heavy metals such as cobalt, mercury, lead and zinc) across biological membranes. These transporters are found in prokaryotes and plants. Experimentally characterized members of the seed alignment include: SP|P37617 from E. coli, SP|Q10866 from Mycobacterium tuberculosis and SP|Q59998 from Synechocystis PCC6803. The cadmium P-type ATPases have been characterized as Type IB based on a phylogenetic analysis which combines the copper-translocating ATPases with the cadmium-translocating species. This model and that describing the copper-ATPases (TIGR01511) are well separated, and thus we further type the copper-ATPases as IB1 and the cadmium-ATPases as IB2. Several sequences which have not been characterized experimentally fall just below trusted cutoff for both of these models (SP|Q9CCL1 from Mycobacterium leprae, GP|13816263 from Sulfolobus solfataricus, OMNI|NTL01CJ01098 from Campylobacter jejuni, OMNI|NTL01HS01687 from Halobacterium sp., GP|6899169 from Ureaplasma urealyticum and OMNI|HP1503 from Helicobacter pylori) [Transport and binding proteins, Cations and iron carrying compounds]. Length = 536 |
| >gnl|CDD|216069 pfam00702, Hydrolase, haloacid dehalogenase-like hydrolase | Back alignment and domain information |
|---|
Score = 57.3 bits (138), Expect = 2e-09
Identities = 37/118 (31%), Positives = 56/118 (47%), Gaps = 18/118 (15%)
Query: 437 IAVVGIKDPVRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAKECGILTSDGEAVEGPE 496
+ ++ + DP+ PG +EA++ EAGI + ++TGDN TA AIA+ G+
Sbjct: 86 LGLIALTDPLYPGAREALKELKEAGIKLAILTGDNRLTANAIARLLGL------------ 133
Query: 497 FRNMSPADIIPKLQVMARSLPSDK--HTLVTQLRNTFGEVVAVTGDGTNDASALHEAD 552
F + AD+ + V P K + +L EV+ V GDG ND A A
Sbjct: 134 FDALVSADLYGLVGV---GKPDPKIFELALEELGVKPEEVLMV-GDGVNDIPAAKAAG 187
|
This family is structurally different from the alpha/beta hydrolase family (pfam00561). This family includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure of the family consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of Pseudomonas sp. (S)-2-haloacid dehalogenase 1. The rest of the fold is composed of the core alpha/beta domain. Those members with the characteristic DxD triad at the N-terminus are probably phosphatidylglycerolphosphate (PGP) phosphatases involved in cardiolipin biosynthesis in the mitochondria. Length = 187 |
| >gnl|CDD|119389 cd01427, HAD_like, Haloacid dehalogenase-like hydrolases | Back alignment and domain information |
|---|
Score = 40.0 bits (94), Expect = 5e-04
Identities = 30/122 (24%), Positives = 48/122 (39%), Gaps = 17/122 (13%)
Query: 446 VRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAKECG-------ILTSDGEAVEGPE-- 496
+ PGVKEA++ E GI + + T + + +E G ++TS+G A+ P+
Sbjct: 25 LYPGVKEALKELKEKGIKLALATNKSRREVLELLEELGLDDYFDPVITSNGAAIYYPKEG 84
Query: 497 FRNMSPADIIPKLQVMARSLPSDKHTLVTQLRNTFGEVVAVTGDGTNDASAL-HEADIGL 555
I K P + L EV+ V GD ND +G+
Sbjct: 85 LFLGGGPFDIGKPN------PDKLLAALKLLGVDPEEVLMV-GDSLNDIEMAKAAGGLGV 137
Query: 556 AM 557
A+
Sbjct: 138 AV 139
|
The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases. Length = 139 |
| >gnl|CDD|236827 PRK11033, zntA, zinc/cadmium/mercury/lead-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Score = 41.9 bits (99), Expect = 8e-04
Identities = 61/243 (25%), Positives = 100/243 (41%), Gaps = 67/243 (27%)
Query: 30 RDGQRQKVCTYDLVVGDIVHLSIGDQVPAYGIFISGHSLLIDESSLSGQSEPRYMYEENP 89
RDG+R++V DL GD++ ++ G ++PA G +S + DES+L+G+S P E
Sbjct: 249 RDGEREEVAIADLRPGDVIEVAAGGRLPADGKLLSPFASF-DESALTGESIP---VERAT 304
Query: 90 FLLAGTKVQGGSGKMLVTTVGMRTEWGKLMETLNEGGEDETPLQVKLNGVATIIGKIELF 149
G KV G+ V + +E L+E G + + I+ IE
Sbjct: 305 ----GEKVPAGA--TSVDRL-------VTLEVLSEPGA---------SAIDRILHLIE-- 340
Query: 150 FSVLEFLVLIGRFLGEKVIHNEFTDWSSADALTLIDYFAVVVTII---------DVAVPE 200
E I RF+ + F+ + I A++V ++ +
Sbjct: 341 -EAEERRAPIERFI------DRFSRIYTP----AIMLVALLVILVPPLLFAAPWQEWIYR 389
Query: 201 GL---------------PLAVTLSLAFAMKKLMNDGALVRHLSACETMGSASCICTDKTR 245
GL P A+T LA A ++ GAL++ +A E +G + + DKT
Sbjct: 390 GLTLLLIGCPCALVISTPAAITSGLAAAARR----GALIKGGAALEQLGRVTTVAFDKTG 445
Query: 246 MLT 248
LT
Sbjct: 446 TLT 448
|
Length = 741 |
| >gnl|CDD|223634 COG0560, SerB, Phosphoserine phosphatase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Score = 38.4 bits (90), Expect = 0.004
Identities = 27/121 (22%), Positives = 38/121 (31%), Gaps = 20/121 (16%)
Query: 444 DPVRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAKECGI--------LTSDGEAVEGP 495
+ PG +E V AG V +++G IA+ GI DG+
Sbjct: 76 LRLTPGAEELVAALKAAGAKVVIISGGFTFLVEPIAERLGIDYVVANELEIDDGKLTGRV 135
Query: 496 EFRNMSPADIIPKLQVMARSLPSDKHTLVTQLRNTFGEVVAVTGDGTNDASALHEADIGL 555
L+ +A L E VA GD ND L A + +
Sbjct: 136 VGPICDGEGKAKALRELAAELGIPLE-----------ETVAY-GDSANDLPMLEAAGLPI 183
Query: 556 A 556
A
Sbjct: 184 A 184
|
Length = 212 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 563 | |||
| KOG0204 | 1034 | consensus Calcium transporting ATPase [Inorganic i | 100.0 | |
| COG0474 | 917 | MgtA Cation transport ATPase [Inorganic ion transp | 100.0 | |
| KOG0202 | 972 | consensus Ca2+ transporting ATPase [Inorganic ion | 100.0 | |
| TIGR01517 | 941 | ATPase-IIB_Ca plasma-membrane calcium-translocatin | 100.0 | |
| TIGR01523 | 1053 | ATPase-IID_K-Na potassium and/or sodium efflux P-t | 100.0 | |
| TIGR01106 | 997 | ATPase-IIC_X-K sodium or proton efflux -- potassiu | 100.0 | |
| TIGR01116 | 917 | ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium | 100.0 | |
| PRK10517 | 902 | magnesium-transporting ATPase MgtA; Provisional | 100.0 | |
| TIGR01522 | 884 | ATPase-IIA2_Ca golgi membrane calcium-translocatin | 100.0 | |
| TIGR01524 | 867 | ATPase-IIIB_Mg magnesium-translocating P-type ATPa | 100.0 | |
| PRK15122 | 903 | magnesium-transporting ATPase; Provisional | 100.0 | |
| TIGR01647 | 755 | ATPase-IIIA_H plasma-membrane proton-efflux P-type | 100.0 | |
| TIGR01657 | 1054 | P-ATPase-V P-type ATPase of unknown pump specifici | 100.0 | |
| PRK01122 | 679 | potassium-transporting ATPase subunit B; Provision | 100.0 | |
| TIGR01652 | 1057 | ATPase-Plipid phospholipid-translocating P-type AT | 100.0 | |
| PRK14010 | 673 | potassium-transporting ATPase subunit B; Provision | 100.0 | |
| KOG0203 | 1019 | consensus Na+/K+ ATPase, alpha subunit [Inorganic | 100.0 | |
| PLN03190 | 1178 | aminophospholipid translocase; Provisional | 100.0 | |
| TIGR01497 | 675 | kdpB K+-transporting ATPase, B subunit. One sequen | 100.0 | |
| COG2217 | 713 | ZntA Cation transport ATPase [Inorganic ion transp | 100.0 | |
| KOG0208 | 1140 | consensus Cation transport ATPase [Inorganic ion t | 100.0 | |
| PRK11033 | 741 | zntA zinc/cadmium/mercury/lead-transporting ATPase | 100.0 | |
| KOG0207 | 951 | consensus Cation transport ATPase [Inorganic ion t | 100.0 | |
| TIGR01494 | 499 | ATPase_P-type ATPase, P-type (transporting), HAD s | 100.0 | |
| KOG0205 | 942 | consensus Plasma membrane H+-transporting ATPase [ | 100.0 | |
| TIGR01525 | 556 | ATPase-IB_hvy heavy metal translocating P-type ATP | 100.0 | |
| TIGR01511 | 562 | ATPase-IB1_Cu copper-(or silver)-translocating P-t | 100.0 | |
| PRK10671 | 834 | copA copper exporting ATPase; Provisional | 100.0 | |
| TIGR01512 | 536 | ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translo | 100.0 | |
| KOG0209 | 1160 | consensus P-type ATPase [Inorganic ion transport a | 100.0 | |
| KOG0206 | 1151 | consensus P-type ATPase [General function predicti | 100.0 | |
| KOG0210 | 1051 | consensus P-type ATPase [Inorganic ion transport a | 100.0 | |
| COG2216 | 681 | KdpB High-affinity K+ transport system, ATPase cha | 100.0 | |
| PF00122 | 230 | E1-E2_ATPase: E1-E2 ATPase p-type cation-transport | 100.0 | |
| PF00702 | 215 | Hydrolase: haloacid dehalogenase-like hydrolase; I | 99.88 | |
| COG4087 | 152 | Soluble P-type ATPase [General function prediction | 99.52 | |
| PF13246 | 91 | Hydrolase_like2: Putative hydrolase of sodium-pota | 99.51 | |
| PRK10513 | 270 | sugar phosphate phosphatase; Provisional | 99.2 | |
| COG0561 | 264 | Cof Predicted hydrolases of the HAD superfamily [G | 99.19 | |
| PRK15126 | 272 | thiamin pyrimidine pyrophosphate hydrolase; Provis | 99.18 | |
| PRK10976 | 266 | putative hydrolase; Provisional | 99.18 | |
| PRK01158 | 230 | phosphoglycolate phosphatase; Provisional | 99.11 | |
| TIGR01487 | 215 | SPP-like sucrose-phosphate phosphatase-like hydrol | 99.09 | |
| KOG4383 | 1354 | consensus Uncharacterized conserved protein [Funct | 99.09 | |
| PRK03669 | 271 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 99.05 | |
| PLN02887 | 580 | hydrolase family protein | 99.05 | |
| COG0560 | 212 | SerB Phosphoserine phosphatase [Amino acid transpo | 99.04 | |
| TIGR01482 | 225 | SPP-subfamily Sucrose-phosphate phosphatase subfam | 99.03 | |
| PF08282 | 254 | Hydrolase_3: haloacid dehalogenase-like hydrolase; | 99.03 | |
| TIGR02137 | 203 | HSK-PSP phosphoserine phosphatase/homoserine phosp | 99.0 | |
| PRK10530 | 272 | pyridoxal phosphate (PLP) phosphatase; Provisional | 98.97 | |
| PRK11133 | 322 | serB phosphoserine phosphatase; Provisional | 98.92 | |
| TIGR01670 | 154 | YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-pho | 98.9 | |
| TIGR02726 | 169 | phenyl_P_delta phenylphosphate carboxylase, delta | 98.89 | |
| TIGR01486 | 256 | HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosph | 98.88 | |
| COG1778 | 170 | Low specificity phosphatase (HAD superfamily) [Gen | 98.87 | |
| PRK00192 | 273 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 98.83 | |
| TIGR00099 | 256 | Cof-subfamily Cof subfamily of IIB subfamily of ha | 98.82 | |
| PRK09484 | 183 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphata | 98.75 | |
| TIGR02461 | 225 | osmo_MPG_phos mannosyl-3-phosphoglycerate phosphat | 98.69 | |
| TIGR02463 | 221 | MPGP_rel mannosyl-3-phosphoglycerate phosphatase-r | 98.68 | |
| KOG1615 | 227 | consensus Phosphoserine phosphatase [Amino acid tr | 98.66 | |
| TIGR01491 | 201 | HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPa | 98.64 | |
| TIGR00338 | 219 | serB phosphoserine phosphatase SerB. Phosphoserine | 98.59 | |
| TIGR01485 | 249 | SPP_plant-cyano sucrose-6F-phosphate phosphohydrol | 98.58 | |
| PRK13582 | 205 | thrH phosphoserine phosphatase; Provisional | 98.52 | |
| PLN02382 | 413 | probable sucrose-phosphatase | 98.5 | |
| PRK10187 | 266 | trehalose-6-phosphate phosphatase; Provisional | 98.5 | |
| TIGR03333 | 214 | salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl | 98.49 | |
| TIGR01490 | 202 | HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrol | 98.48 | |
| PRK12702 | 302 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 98.45 | |
| PRK14502 | 694 | bifunctional mannosyl-3-phosphoglycerate synthase/ | 98.44 | |
| TIGR02471 | 236 | sucr_syn_bact_C sucrose phosphate synthase, sucros | 98.4 | |
| TIGR01488 | 177 | HAD-SF-IB Haloacid Dehalogenase superfamily, subfa | 98.38 | |
| PF12710 | 192 | HAD: haloacid dehalogenase-like hydrolase; PDB: 3P | 98.36 | |
| TIGR01489 | 188 | DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopent | 98.35 | |
| cd01427 | 139 | HAD_like Haloacid dehalogenase-like hydrolases. Th | 98.32 | |
| PRK09552 | 219 | mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosp | 98.29 | |
| COG0546 | 220 | Gph Predicted phosphatases [General function predi | 98.28 | |
| PLN02954 | 224 | phosphoserine phosphatase | 98.27 | |
| PTZ00174 | 247 | phosphomannomutase; Provisional | 98.17 | |
| TIGR01484 | 204 | HAD-SF-IIB HAD-superfamily hydrolase, subfamily II | 98.16 | |
| PRK13222 | 226 | phosphoglycolate phosphatase; Provisional | 98.12 | |
| TIGR01449 | 213 | PGP_bact 2-phosphoglycolate phosphatase, prokaryot | 98.04 | |
| TIGR01454 | 205 | AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthes | 98.03 | |
| PRK10826 | 222 | 2-deoxyglucose-6-phosphatase; Provisional | 98.01 | |
| PRK13223 | 272 | phosphoglycolate phosphatase; Provisional | 97.94 | |
| PRK08238 | 479 | hypothetical protein; Validated | 97.91 | |
| PRK13288 | 214 | pyrophosphatase PpaX; Provisional | 97.89 | |
| PRK13226 | 229 | phosphoglycolate phosphatase; Provisional | 97.88 | |
| PF05116 | 247 | S6PP: Sucrose-6F-phosphate phosphohydrolase; Inter | 97.84 | |
| TIGR01548 | 197 | HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, | 97.83 | |
| PRK11590 | 211 | hypothetical protein; Provisional | 97.82 | |
| TIGR01545 | 210 | YfhB_g-proteo haloacid dehalogenase superfamily, s | 97.8 | |
| smart00775 | 157 | LNS2 LNS2 domain. This domain is found in Saccharo | 97.8 | |
| PLN02770 | 248 | haloacid dehalogenase-like hydrolase family protei | 97.76 | |
| TIGR03351 | 220 | PhnX-like phosphonatase-like hydrolase. This clade | 97.74 | |
| TIGR01422 | 253 | phosphonatase phosphonoacetaldehyde hydrolase. Thi | 97.73 | |
| TIGR01428 | 198 | HAD_type_II 2-haloalkanoic acid dehalogenase, type | 97.69 | |
| TIGR01990 | 185 | bPGM beta-phosphoglucomutase. The enzyme from L. l | 97.67 | |
| PLN03243 | 260 | haloacid dehalogenase-like hydrolase; Provisional | 97.67 | |
| TIGR01544 | 277 | HAD-SF-IE haloacid dehalogenase superfamily, subfa | 97.66 | |
| TIGR01662 | 132 | HAD-SF-IIIA HAD-superfamily hydrolase, subfamily I | 97.63 | |
| TIGR02253 | 221 | CTE7 HAD superfamily (subfamily IA) hydrolase, TIG | 97.6 | |
| PRK14501 | 726 | putative bifunctional trehalose-6-phosphate syntha | 97.58 | |
| PRK13225 | 273 | phosphoglycolate phosphatase; Provisional | 97.55 | |
| PRK13478 | 267 | phosphonoacetaldehyde hydrolase; Provisional | 97.53 | |
| TIGR01672 | 237 | AphA HAD superfamily (subfamily IIIB) phosphatase, | 97.5 | |
| PRK11009 | 237 | aphA acid phosphatase/phosphotransferase; Provisio | 97.47 | |
| TIGR01509 | 183 | HAD-SF-IA-v3 haloacid dehalogenase superfamily, su | 97.46 | |
| PLN02575 | 381 | haloacid dehalogenase-like hydrolase | 97.46 | |
| PRK14988 | 224 | GMP/IMP nucleotidase; Provisional | 97.45 | |
| PHA02530 | 300 | pseT polynucleotide kinase; Provisional | 97.44 | |
| PRK11587 | 218 | putative phosphatase; Provisional | 97.43 | |
| TIGR02009 | 185 | PGMB-YQAB-SF beta-phosphoglucomutase family hydrol | 97.41 | |
| PF13419 | 176 | HAD_2: Haloacid dehalogenase-like hydrolase; PDB: | 97.38 | |
| PLN02940 | 382 | riboflavin kinase | 97.3 | |
| COG4359 | 220 | Uncharacterized conserved protein [Function unknow | 97.25 | |
| TIGR02252 | 203 | DREG-2 REG-2-like, HAD superfamily (subfamily IA) | 97.22 | |
| TIGR01685 | 174 | MDP-1 magnesium-dependent phosphatase-1. This mode | 97.22 | |
| TIGR01549 | 154 | HAD-SF-IA-v1 haloacid dehalogenase superfamily, su | 97.17 | |
| PLN02779 | 286 | haloacid dehalogenase-like hydrolase family protei | 97.12 | |
| PRK06698 | 459 | bifunctional 5'-methylthioadenosine/S-adenosylhomo | 97.11 | |
| PRK06769 | 173 | hypothetical protein; Validated | 97.08 | |
| TIGR01261 | 161 | hisB_Nterm histidinol-phosphatase. This model desc | 97.06 | |
| TIGR01675 | 229 | plant-AP plant acid phosphatase. This model explic | 97.02 | |
| PLN02580 | 384 | trehalose-phosphatase | 97.0 | |
| TIGR01668 | 170 | YqeG_hyp_ppase HAD superfamily (subfamily IIIA) ph | 96.99 | |
| TIGR02254 | 224 | YjjG/YfnB HAD superfamily (subfamily IA) hydrolase | 96.98 | |
| PRK09449 | 224 | dUMP phosphatase; Provisional | 96.96 | |
| COG3769 | 274 | Predicted hydrolase (HAD superfamily) [General fun | 96.96 | |
| TIGR01656 | 147 | Histidinol-ppas histidinol-phosphate phosphatase f | 96.89 | |
| TIGR01691 | 220 | enolase-ppase 2,3-diketo-5-methylthio-1-phosphopen | 96.86 | |
| PLN02423 | 245 | phosphomannomutase | 96.84 | |
| PRK08942 | 181 | D,D-heptose 1,7-bisphosphate phosphatase; Validate | 96.84 | |
| PLN02811 | 220 | hydrolase | 96.81 | |
| TIGR01533 | 266 | lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) famil | 96.73 | |
| TIGR01664 | 166 | DNA-3'-Pase DNA 3'-phosphatase. The central phosph | 96.73 | |
| TIGR01681 | 128 | HAD-SF-IIIC HAD-superfamily phosphatase, subfamily | 96.73 | |
| PF06888 | 234 | Put_Phosphatase: Putative Phosphatase; InterPro: I | 96.67 | |
| smart00577 | 148 | CPDc catalytic domain of ctd-like phosphatases. | 96.66 | |
| COG2179 | 175 | Predicted hydrolase of the HAD superfamily [Genera | 96.6 | |
| PLN02205 | 854 | alpha,alpha-trehalose-phosphate synthase [UDP-form | 96.54 | |
| TIGR00213 | 176 | GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase | 96.5 | |
| TIGR02247 | 211 | HAD-1A3-hyp Epoxide hydrolase N-terminal domain-li | 96.46 | |
| PRK10725 | 188 | fructose-1-P/6-phosphogluconate phosphatase; Provi | 96.43 | |
| TIGR01457 | 249 | HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydr | 96.31 | |
| COG0637 | 221 | Predicted phosphatase/phosphohexomutase [General f | 96.29 | |
| PRK09456 | 199 | ?-D-glucose-1-phosphatase; Provisional | 96.26 | |
| PRK10563 | 221 | 6-phosphogluconate phosphatase; Provisional | 96.23 | |
| TIGR01993 | 184 | Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These | 96.19 | |
| TIGR01459 | 242 | HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolas | 96.14 | |
| KOG3120 | 256 | consensus Predicted haloacid dehalogenase-like hyd | 96.05 | |
| PLN02919 | 1057 | haloacid dehalogenase-like hydrolase family protei | 95.96 | |
| PF13344 | 101 | Hydrolase_6: Haloacid dehalogenase-like hydrolase; | 95.96 | |
| TIGR01686 | 320 | FkbH FkbH-like domain. The C-terminal portion of t | 95.92 | |
| PRK10444 | 248 | UMP phosphatase; Provisional | 95.91 | |
| PLN03017 | 366 | trehalose-phosphatase | 95.91 | |
| PRK05446 | 354 | imidazole glycerol-phosphate dehydratase/histidino | 95.83 | |
| PF08235 | 157 | LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 | 95.66 | |
| COG4030 | 315 | Uncharacterized protein conserved in archaea [Func | 95.48 | |
| PF03767 | 229 | Acid_phosphat_B: HAD superfamily, subfamily IIIB ( | 95.41 | |
| PLN02645 | 311 | phosphoglycolate phosphatase | 95.26 | |
| PHA02597 | 197 | 30.2 hypothetical protein; Provisional | 95.04 | |
| PF09419 | 168 | PGP_phosphatase: Mitochondrial PGP phosphatase; In | 94.79 | |
| TIGR01680 | 275 | Veg_Stor_Prot vegetative storage protein. The prot | 94.65 | |
| TIGR00685 | 244 | T6PP trehalose-phosphatase. At least 18 distinct s | 94.34 | |
| TIGR01684 | 301 | viral_ppase viral phosphatase. These proteins also | 93.97 | |
| COG1011 | 229 | Predicted hydrolase (HAD superfamily) [General fun | 93.88 | |
| PRK10748 | 238 | flavin mononucleotide phosphatase; Provisional | 93.69 | |
| KOG3040 | 262 | consensus Predicted sugar phosphatase (HAD superfa | 93.17 | |
| PLN02151 | 354 | trehalose-phosphatase | 92.92 | |
| PLN02177 | 497 | glycerol-3-phosphate acyltransferase | 92.9 | |
| COG3700 | 237 | AphA Acid phosphatase (class B) [General function | 92.82 | |
| TIGR01458 | 257 | HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydr | 92.81 | |
| TIGR01493 | 175 | HAD-SF-IA-v2 Haloacid dehalogenase superfamily, su | 92.5 | |
| TIGR01452 | 279 | PGP_euk phosphoglycolate/pyridoxal phosphate phosp | 92.39 | |
| PHA03398 | 303 | viral phosphatase superfamily protein; Provisional | 91.75 | |
| PF02358 | 235 | Trehalose_PPase: Trehalose-phosphatase; InterPro: | 91.63 | |
| TIGR01689 | 126 | EcbF-BcbF capsule biosynthesis phosphatase. Due to | 90.51 | |
| TIGR01663 | 526 | PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase | 90.03 | |
| TIGR02244 | 343 | HAD-IG-Ncltidse HAD superfamily (subfamily IG) hyd | 90.0 | |
| PF12689 | 169 | Acid_PPase: Acid Phosphatase; InterPro: IPR010036 | 89.6 | |
| TIGR02251 | 162 | HIF-SF_euk Dullard-like phosphatase domain. This d | 89.37 | |
| COG0647 | 269 | NagD Predicted sugar phosphatases of the HAD super | 88.42 | |
| COG0241 | 181 | HisB Histidinol phosphatase and related phosphatas | 87.43 | |
| COG1877 | 266 | OtsB Trehalose-6-phosphatase [Carbohydrate transpo | 86.28 | |
| TIGR01458 | 257 | HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydr | 85.87 | |
| COG2503 | 274 | Predicted secreted acid phosphatase [General funct | 82.42 | |
| KOG3085 | 237 | consensus Predicted hydrolase (HAD superfamily) [G | 80.57 |
| >KOG0204 consensus Calcium transporting ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-101 Score=790.18 Aligned_cols=557 Identities=59% Similarity=0.908 Sum_probs=516.4
Q ss_pred CchhhHHHHHHHHHHHHHHHhccCeeEEEECCEEEEeecCCcccCcEEEeCCCCeeeceEEEEeeCceEEEeccCcCCCC
Q 044020 1 MVTAISDYKQSLQFRDLDREKKKIFIQVTRDGQRQKVCTYDLVVGDIVHLSIGDQVPAYGIFISGHSLLIDESSLSGQSE 80 (563)
Q Consensus 1 ~~~~~~~~~~~~~~~~l~~~~~~~~~~V~r~g~~~~i~~~~L~~GDiI~v~~G~~iPaD~~ll~g~~l~Vdes~lTGes~ 80 (563)
+++++++|+|++|+++|+++..+.++.|+|||+.++|+..||+||||+.++.||.+||||++++|++|.||||++||||+
T Consensus 197 ~VtA~nDy~qe~QF~~L~~~k~~~k~~ViR~G~r~~isI~diVVGDIv~lk~GDqvPADGvli~gn~L~iDESSlTGESd 276 (1034)
T KOG0204|consen 197 LVTAVNDYRQELQFRKLQKEKRNIKFQVIRGGRRQQISIYDLVVGDIVQLKIGDQVPADGVLIQGNSLKIDESSLTGESD 276 (1034)
T ss_pred EEeecchhHHhhhhhhhhhhhhceEEEEEECCEEEEEEEeeeeeccEEEeecCCccccceEEEeccceeEecccccCCCc
Confidence 47899999999999999999889999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccC-CCCeEEecceeecCcEEEEEEEEcccchhHHHHHHhccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 044020 81 PRYMYE-ENPFLLAGTKVQGGSGKMLVTTVGMRTEWGKLMETLNEGGEDETPLQVKLNGVATIIGKIELFFSVLEFLVLI 159 (563)
Q Consensus 81 p~~k~~-~~~~i~~Gt~v~~g~~~~~V~~tg~~t~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 159 (563)
++.|.. .++++++||++.+|+++++|+.+|.+|.+|+++..+.....+++|+|.++++++..+..+.++++.+++++++
T Consensus 277 ~v~k~~~~dPfLlSGTkv~eGsgkMlVTaVGmnt~wG~~m~~l~~~~~e~tpLQ~kL~~lA~~Igk~Gl~~A~~~~~VL~ 356 (1034)
T KOG0204|consen 277 HVQKSLDKDPFLLSGTKVMEGSGKMLVTAVGMNTQWGIIMTLLGAGGEEETPLQVKLNGLATQIGKIGLLFAALTFIVLV 356 (1034)
T ss_pred ceeccCCCCCeEeecceeecCcceEEEEEeeecchHhhHHHhhhcCCCcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999986 7899999999999999999999999999999999999988899999999999999999999999999999998
Q ss_pred HHHhhcccccccc--ccccchhhHHHHHHHHHHHHhhhhccCCchHHHHHHHHHHHHHHHhhCCCeeecchhhhhcCCee
Q 044020 160 GRFLGEKVIHNEF--TDWSSADALTLIDYFAVVVTIIDVAVPEGLPLAVTLSLAFAMKKLMNDGALVRHLSACETMGSAS 237 (563)
Q Consensus 160 ~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~i~ili~~~P~~l~~~~~~~~~~~~~~l~~~~i~~k~~~~le~l~~v~ 237 (563)
..|+......... ..|.......+..+|..++.++++|+|.+||+++++++++++++|.+.+.++|+.++||++|..+
T Consensus 357 ~r~~~~~~~~~~~~~~~~~~~~~~~~v~~f~i~VTilVVAVPEGLPLAVTLsLAys~kkMmkD~~LVRhL~ACETMGsAT 436 (1034)
T KOG0204|consen 357 IRFFIGKTKIEGGTGTTWSDEYIQEFVKFFIIAVTILVVAVPEGLPLAVTLSLAYSMKKMMKDNNLVRHLDACETMGSAT 436 (1034)
T ss_pred HHHhheeeecCCCCCccccHHHHHHHHHHhhheeEEEEEECCCCccHHHHHHHHHHHHHHhcchhHHHHhHHHhhcCCce
Confidence 8887766554433 35555557788999999999999999999999999999999999999999999999999999999
Q ss_pred eeecccccccccCceEEEEEEEcCeeeeecCCCccccccccccHHHHHHHHHHHHhccCCceeecCCC--CceecCCccH
Q 044020 238 CICTDKTRMLTTNHMVVDKIWIANTISNVEGNNRKDILQSEISERVLDITLQAIFQNTGSKVVKDKDG--KNSILGTPTE 315 (563)
Q Consensus 238 ~i~~DKTGTLT~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~e 315 (563)
+||.|||||||+|+|.|.+.|+.+..+..+... . ..+.+...+++..+...|+...++..+.+ ..+..|+|+|
T Consensus 437 ~ICsDKTGTLT~N~MtVV~~~~~~~~~k~~~~~-~----~~l~~~~~~ll~~gI~~Nt~g~v~~~~~~g~~~~~~GspTE 511 (1034)
T KOG0204|consen 437 AICSDKTGTLTTNRMTVVQSYIGSEHYKVNSPK-S----SNLPPSLLDLLLQGIAQNTTGSVVKPEKGGEQPEQLGSPTE 511 (1034)
T ss_pred EEEecCcCceEeeeEEEEeeeeccccccccCcc-c----ccCCHHHHHHHHHHHhhcCCCeEEecCCCCcCccccCCHHH
Confidence 999999999999999999999988876533222 1 34678889999999999998888887665 6799999999
Q ss_pred HHHHHHHHHcCCChHHHhhhceEEEEecCCCCceeEEEEEEcCCCeEEEEEeCChhHHHhcccccccCCCccccCCHHHH
Q 044020 316 SAILEFGLRLGGDFEAQRREFKIVKVEPFNSVRKKMSVLIALPAGGMRAFCKGASEIVLSMCDKVVSDNGEPVPLSEEQF 395 (563)
Q Consensus 316 ~al~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~sviv~~~~~~~~~~~kG~~~~il~~c~~~~~~~~~~~~~~~~~~ 395 (563)
.||+.|+..+|.+++..|....+++.+||+|.||+|+++++.++++.++++||++|.++.+|+++++.+|+..+++++.+
T Consensus 512 ~AlL~f~~~LG~~~~~~R~e~~v~kv~~FNS~kK~~gvvi~~~~~~~y~~~KGAsEiVL~~C~~~~~~~g~~~~~~e~~~ 591 (1034)
T KOG0204|consen 512 CALLGFGLKLGMDFQDVRPEEKVVKVYPFNSVKKRMGVVIKLPDGGHYVHWKGASEIVLKSCEYYIDSNGELVPFNEDDR 591 (1034)
T ss_pred HHHHHHHHHhCcchHhhcchhheeEEeccCcccceeeEEEEcCCCCeEEEEcChHHHHHHhhhheECCCCCEeeCCHHHH
Confidence 99999999999999999999999999999999999999999887772399999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhHhHhhhhccCCC----CC--CCCCCCCCceEEEEecccCCCCcchHHHHHHHHhCCCeEEEEcC
Q 044020 396 RNITDVINGFASEALRTLCLAFKDLNDS----SN--ENNIPDSGYTLIAVVGIKDPVRPGVKEAVQTCLEAGITVRMVTG 469 (563)
Q Consensus 396 ~~i~~~~~~~~~~G~r~i~~a~~~l~~~----~~--~~~~~~~~~~~lG~i~~~d~~~~~~~~~I~~l~~~gi~v~i~TG 469 (563)
..+++.++.++++|+|++|+|||++... +. .....+.+++++|+++++||.||+++++|+.|+++||+|-|+||
T Consensus 592 ~~~~~~Ie~mA~~~LRti~lAy~df~~~~~~~~~~~~~~~~~~~lt~laivGIkDPvRPgV~~AV~~Cq~AGItVRMVTG 671 (1034)
T KOG0204|consen 592 KSFKDVIEPMASEGLRTICLAYRDFVAGPDEEPSWDNEELPEGGLTLLAIVGIKDPVRPGVPEAVQLCQRAGITVRMVTG 671 (1034)
T ss_pred HHHHHHHHHHHHhhhheeeEEeeccccCCCCCCCccccccCCCCeEEEEEeeccCCCCCCcHHHHHHHHHcCcEEEEEeC
Confidence 9999999999999999999999995544 11 12467899999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHcCCCCCCC--ceeechhhhcCCCC---CCCcceeEEEecChhhHHHHHHHHHHhcCCEEEEEcCCccC
Q 044020 470 DNINTARAIAKECGILTSDG--EAVEGPEFRNMSPA---DIIPKLQVMARSLPSDKHTLVTQLRNTFGEVVAVTGDGTND 544 (563)
Q Consensus 470 d~~~~a~~~a~~lgi~~~~~--~~~~g~~~~~~~~~---~~~~~~~v~~~~~p~~K~~~v~~l~~~~g~~v~~iGDg~ND 544 (563)
|+..+|+++|.+|||..++. .++.|+++.+++++ ++++++.|++|.+|.+|.-+|+.+++. |++|++.|||.||
T Consensus 672 DNI~TAkAIA~eCGILt~~~d~~~lEG~eFr~~s~ee~~~i~pkl~VlARSSP~DK~lLVk~L~~~-g~VVAVTGDGTND 750 (1034)
T KOG0204|consen 672 DNINTAKAIARECGILTPGGDFLALEGKEFRELSQEERDKIWPKLRVLARSSPNDKHLLVKGLIKQ-GEVVAVTGDGTND 750 (1034)
T ss_pred CcHHHHHHHHHHcccccCCCccceecchhhhhcCHHHHHhhhhhheeeecCCCchHHHHHHHHHhc-CcEEEEecCCCCC
Confidence 99999999999999998877 89999999998877 889999999999999999999999987 9999999999999
Q ss_pred HHHHhhCCceEeecCCCCC
Q 044020 545 ASALHEADIGLAMGIAGTE 563 (563)
Q Consensus 545 ~~~l~~a~vgiamg~~~~~ 563 (563)
.|+|+.||||.|||+.|+|
T Consensus 751 aPALkeADVGlAMGIaGTe 769 (1034)
T KOG0204|consen 751 APALKEADVGLAMGIAGTE 769 (1034)
T ss_pred chhhhhcccchhccccchh
Confidence 9999999999999999985
|
|
| >COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.5e-94 Score=798.73 Aligned_cols=527 Identities=38% Similarity=0.576 Sum_probs=459.1
Q ss_pred hhHHHHHHHHHHHHHHHhccCeeEEEECCEEEEeecCCcccCcEEEeCCCCeeeceEEEEeeCceEEEeccCcCCCCccc
Q 044020 4 AISDYKQSLQFRDLDREKKKIFIQVTRDGQRQKVCTYDLVVGDIVHLSIGDQVPAYGIFISGHSLLIDESSLSGQSEPRY 83 (563)
Q Consensus 4 ~~~~~~~~~~~~~l~~~~~~~~~~V~r~g~~~~i~~~~L~~GDiI~v~~G~~iPaD~~ll~g~~l~Vdes~lTGes~p~~ 83 (563)
...+|+.++...++.+.. +.+++|+|||++++|++++|||||||.+++||+||||++|+++++++||||+|||||.|+.
T Consensus 121 ~~qe~~a~~~l~~lk~~~-~~~~~V~R~g~~~~i~a~eLVpGDiV~l~~gd~vPAD~rLl~~~~l~VdEs~LTGES~pv~ 199 (917)
T COG0474 121 FVQEYRAEKALEALKKMS-SPKAKVLRDGKFVEIPASELVPGDIVLLEAGDVVPADLRLLESSDLEVDESALTGESLPVE 199 (917)
T ss_pred HHHHHHHHHHHHHHHhhc-cCceEEEeCCcEEEecHHHCCCCcEEEECCCCccccceEEEEecCceEEcccccCCCcchh
Confidence 345555555555555543 6789999999999999999999999999999999999999999999999999999999999
Q ss_pred cc-------------CCCCeEEecceeecCcEEEEEEEEcccchhHHHHHHhccCCCCCCchHHHHHHHHHHHHHHHHHH
Q 044020 84 MY-------------EENPFLLAGTKVQGGSGKMLVTTVGMRTEWGKLMETLNEGGEDETPLQVKLNGVATIIGKIELFF 150 (563)
Q Consensus 84 k~-------------~~~~~i~~Gt~v~~g~~~~~V~~tg~~t~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 150 (563)
|. +..+++|+||.+.+|.+.++|++||.+|..|++.+.+......++|+++.++++..++..+++++
T Consensus 200 K~~~~~~~~~~~~~~d~~n~l~sGt~V~~G~~~giVvaTG~~T~~G~ia~~~~~~~~~~t~l~~~l~~~~~~l~~~~l~~ 279 (917)
T COG0474 200 KQALPLTKSDAPLGLDRDNMLFSGTTVVSGRAKGIVVATGFETEFGKIARLLPTKKEVKTPLQRKLNKLGKFLLVLALVL 279 (917)
T ss_pred ccccccccccccccCCccceEEeCCEEEcceEEEEEEEEcCccHHHHHHHhhccccccCCcHHHHHHHHHHHHHHHHHHH
Confidence 96 45789999999999999999999999999999999999876789999999999999999988888
Q ss_pred HHHHHHHHHHHHhhccccccccccccchhhHHHHHHHHHHHHhhhhccCCchHHHHHHHHHHHHHHHhhCCCeeecchhh
Q 044020 151 SVLEFLVLIGRFLGEKVIHNEFTDWSSADALTLIDYFAVVVTIIDVAVPEGLPLAVTLSLAFAMKKLMNDGALVRHLSAC 230 (563)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ili~~~P~~l~~~~~~~~~~~~~~l~~~~i~~k~~~~l 230 (563)
+++++++.++.. . ..+...|+.+++++++++|.+||+.++++++.+..+|+++++++|+++++
T Consensus 280 ~~~~~~~~~~~~--~---------------~~~~~~~~~~v~l~va~IPegLp~~vti~la~g~~~mak~~~ivr~l~av 342 (917)
T COG0474 280 GALVFVVGLFRG--G---------------NGLLESFLTALALAVAAVPEGLPAVVTIALALGAQRMAKDNAIVRSLNAI 342 (917)
T ss_pred HHHHHHHHHHhc--C---------------ccHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHHhccchhhccchh
Confidence 887777652211 0 12577899999999999999999999999999999999999999999999
Q ss_pred hhcCCeeeeecccccccccCceEEEEEEEcCeeeeecCCCccccccccccHHHHHHHHHHHHhccCCceeecCCCCceec
Q 044020 231 ETMGSASCICTDKTRMLTTNHMVVDKIWIANTISNVEGNNRKDILQSEISERVLDITLQAIFQNTGSKVVKDKDGKNSIL 310 (563)
Q Consensus 231 e~l~~v~~i~~DKTGTLT~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (563)
|+||++|+||+|||||||+|+|+|.+++..+...... ........... .+..++.+||.+....+ + ++..
T Consensus 343 E~LG~v~vICsDKTGTLTqN~M~v~~~~~~~~~~~~~------~~~~~~~~~~~-~~l~~~~lc~~~~~~~~-~--~~~~ 412 (917)
T COG0474 343 ETLGSVDVICSDKTGTLTQNKMTVKKIYINGGGKDID------DKDLKDSPALL-RFLLAAALCNSVTPEKN-G--WYQA 412 (917)
T ss_pred hhccCccEEEecCCCCCccCeEEEEEEEeCCCccccc------ccccccchHHH-HHHHHHHhcCccccccc-C--ceec
Confidence 9999999999999999999999999999985110000 00111122222 34444555665555444 3 7788
Q ss_pred CCccHHHHHHHHHHcCC--ChHHHhhhceEEEEecCCCCceeEEEEEEcCCCeEEEEEeCChhHHHhcccccccCCCccc
Q 044020 311 GTPTESAILEFGLRLGG--DFEAQRREFKIVKVEPFNSVRKKMSVLIALPAGGMRAFCKGASEIVLSMCDKVVSDNGEPV 388 (563)
Q Consensus 311 ~~~~e~al~~~~~~~~~--~~~~~~~~~~~~~~~~f~~~~~~~sviv~~~~~~~~~~~kG~~~~il~~c~~~~~~~~~~~ 388 (563)
|||+|.|+++++.+.+. +.......+++++.+||+|+||||+++++..++++++++||+||.|+++|+.. +...
T Consensus 413 gdptE~Al~~~a~~~~~~~~~~~~~~~~~~~~~~PFdS~rKrMsviv~~~~~~~~~~~KGApe~il~~~~~~----~~~~ 488 (917)
T COG0474 413 GDPTEGALVEFAEKLGFSLDLSGLEVEYPILAEIPFDSERKRMSVIVKTDEGKYILFVKGAPEVILERCKSI----GELE 488 (917)
T ss_pred CCccHHHHHHHHHhcCCcCCHHHHhhhcceeEEecCCCCceEEEEEEEcCCCcEEEEEcCChHHHHHHhccc----Cccc
Confidence 99999999999999998 88888888999999999999999999999777779999999999999999876 6778
Q ss_pred cCCHHHHHHHHHHHHHHHHHHHhHhHhhhhccCCCCCCC--CCCCCCceEEEEecccCCCCcchHHHHHHHHhCCCeEEE
Q 044020 389 PLSEEQFRNITDVINGFASEALRTLCLAFKDLNDSSNEN--NIPDSGYTLIAVVGIKDPVRPGVKEAVQTCLEAGITVRM 466 (563)
Q Consensus 389 ~~~~~~~~~i~~~~~~~~~~G~r~i~~a~~~l~~~~~~~--~~~~~~~~~lG~i~~~d~~~~~~~~~I~~l~~~gi~v~i 466 (563)
+++++.++.+.+..+.|+++|+|++++|||.++..+... ...|+|++|+|+++|+||+|++++++|+.|+++||+++|
T Consensus 489 ~~~~~~~~~~~~~~~~la~~glRvla~A~k~~~~~~~~~~~~~~E~dl~~lGl~g~~Dppr~~v~~aI~~l~~AGI~v~M 568 (917)
T COG0474 489 PLTEEGLRTLEEAVKELASEGLRVLAVAYKKLDRAEKDDEVDEIESDLVFLGLTGIEDPPREDVKEAIEELREAGIKVWM 568 (917)
T ss_pred ccCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcccccchhhhhhccceeehhhhccCCCCccHHHHHHHHHHCCCcEEE
Confidence 899999999999999999999999999999776655432 468899999999999999999999999999999999999
Q ss_pred EcCCCHHHHHHHHHHcCCCCCC--CceeechhhhcCCCC---CCCcceeEEEecChhhHHHHHHHHHHhcCCEEEEEcCC
Q 044020 467 VTGDNINTARAIAKECGILTSD--GEAVEGPEFRNMSPA---DIIPKLQVMARSLPSDKHTLVTQLRNTFGEVVAVTGDG 541 (563)
Q Consensus 467 ~TGd~~~~a~~~a~~lgi~~~~--~~~~~g~~~~~~~~~---~~~~~~~v~~~~~p~~K~~~v~~l~~~~g~~v~~iGDg 541 (563)
+|||+..+|.++|+++|+.... ..+++|.+++.+.++ +...+..+|||++|+||..+|+.||++ |+.|+|+|||
T Consensus 569 iTGD~~~TA~aIa~~~Gi~~~~~~~~vi~G~el~~l~~~el~~~~~~~~VfARvsP~qK~~IV~~lq~~-g~vVamtGDG 647 (917)
T COG0474 569 ITGDHVETAIAIAKECGIEAEAESALVIDGAELDALSDEELAELVEELSVFARVSPEQKARIVEALQKS-GHVVAMTGDG 647 (917)
T ss_pred ECCCCHHHHHHHHHHcCCCCCCCceeEeehHHhhhcCHHHHHHHhhhCcEEEEcCHHHHHHHHHHHHhC-CCEEEEeCCC
Confidence 9999999999999999998776 459999999998886 566667799999999999999999999 9999999999
Q ss_pred ccCHHHHhhCCceEeecCCCCC
Q 044020 542 TNDASALHEADIGLAMGIAGTE 563 (563)
Q Consensus 542 ~ND~~~l~~a~vgiamg~~~~~ 563 (563)
.||+||||+||||||||.+|+|
T Consensus 648 vNDapALk~ADVGIamg~~Gtd 669 (917)
T COG0474 648 VNDAPALKAADVGIAMGGEGTD 669 (917)
T ss_pred chhHHHHHhcCccEEecccHHH
Confidence 9999999999999999976764
|
|
| >KOG0202 consensus Ca2+ transporting ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-94 Score=736.14 Aligned_cols=549 Identities=36% Similarity=0.562 Sum_probs=462.0
Q ss_pred hhHHHHHHHHHHHHHHHhccCeeEEEECCEEEEeecCCcccCcEEEeCCCCeeeceEEEEeeCceEEEeccCcCCCCccc
Q 044020 4 AISDYKQSLQFRDLDREKKKIFIQVTRDGQRQKVCTYDLVVGDIVHLSIGDQVPAYGIFISGHSLLIDESSLSGQSEPRY 83 (563)
Q Consensus 4 ~~~~~~~~~~~~~l~~~~~~~~~~V~r~g~~~~i~~~~L~~GDiI~v~~G~~iPaD~~ll~g~~l~Vdes~lTGes~p~~ 83 (563)
.+.||+.++..++|.+ +.+..++|+|+|+.+.+++++|||||||.++.||+||||.++++..++.||||.|||||.|+.
T Consensus 96 ~~QEy~aEkalEaLk~-l~p~~~~V~R~gk~~~i~A~eLVPGDiV~l~vGDkVPADlRl~e~~sl~iDeS~LTGEs~pv~ 174 (972)
T KOG0202|consen 96 FVQEYNAEKALEALKE-LVPPMAHVLRSGKLQHILARELVPGDIVELKVGDKIPADLRLIEAKSLRIDESSLTGESEPVS 174 (972)
T ss_pred eeeehhhHHHHHHHHh-cCCccceEEecCcccceehhccCCCCEEEEecCCccccceeEEeeeeeeeecccccCCccccc
Confidence 4568888888888775 457789999999999999999999999999999999999999999999999999999999999
Q ss_pred cc-------------CCCCeEEecceeecCcEEEEEEEEcccchhHHHHHHhccCCCCCCchHHHHHHHHHHHHHHHHHH
Q 044020 84 MY-------------EENPFLLAGTKVQGGSGKMLVTTVGMRTEWGKLMETLNEGGEDETPLQVKLNGVATIIGKIELFF 150 (563)
Q Consensus 84 k~-------------~~~~~i~~Gt~v~~g~~~~~V~~tg~~t~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 150 (563)
|. +..|++|+||.|..|.++++|+.||.+|.+|++.+.++..+.+++|+|+.++.+.+.+..+..+.
T Consensus 175 K~t~~v~~~~~~~~~dk~NiaFsGT~V~~G~a~GIVi~TG~nTeiG~I~~~m~~~e~~kTPLqk~ld~~G~qLs~~is~i 254 (972)
T KOG0202|consen 175 KDTDAVPKDENADVQDKKNIAFSGTLVVAGRAKGIVIGTGLNTEIGKIFKMMQATESPKTPLQKKLDEFGKQLSKVISFI 254 (972)
T ss_pred ccCccccCCCCCccccceeeEeecceeecCceeEEEEeccccchHHHHHHHHhccCCCCCcHHHHHHHHHHHHHHHheeh
Confidence 84 34568999999999999999999999999999999999989999999999999999988665554
Q ss_pred HHHHHHHHHHHHhhccccccccccccchhhHHHHHHHHHHHHhhhhccCCchHHHHHHHHHHHHHHHhhCCCeeecchhh
Q 044020 151 SVLEFLVLIGRFLGEKVIHNEFTDWSSADALTLIDYFAVVVTIIDVAVPEGLPLAVTLSLAFAMKKLMNDGALVRHLSAC 230 (563)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ili~~~P~~l~~~~~~~~~~~~~~l~~~~i~~k~~~~l 230 (563)
++.+.++-+..|. . ......| +.....+|..++++.++++|.+||..++++++.|.+||+|+++++|...++
T Consensus 255 ~v~v~~~nig~f~-~---p~~~g~~----fk~~~~~f~IaVsLAVAAIPEGLPaVvT~tLALG~~rMakknaIVRkLPsV 326 (972)
T KOG0202|consen 255 CVGVWLLNIGHFL-D---PVHGGSW----FKGALYYFKIAVSLAVAAIPEGLPAVVTTTLALGTRRMAKKNAIVRKLPSV 326 (972)
T ss_pred hhhHHHhhhhhhc-c---ccccccc----hhchhhhhhHHHHHHHHhccCCCcchhhhhHHHhHHHHHhhhhhhhcccch
Confidence 4444444222222 0 0111122 235678899999999999999999999999999999999999999999999
Q ss_pred hhcCCeeeeecccccccccCceEEEEEEEcCeeeeec---------CCCccccc--------cccccHHHHHHHHHHHHh
Q 044020 231 ETMGSASCICTDKTRMLTTNHMVVDKIWIANTISNVE---------GNNRKDIL--------QSEISERVLDITLQAIFQ 293 (563)
Q Consensus 231 e~l~~v~~i~~DKTGTLT~~~~~v~~i~~~~~~~~~~---------~~~~~~~~--------~~~~~~~~~~~~~~~~~~ 293 (563)
|+||-+++||.|||||||+|+|.+.++|+.+...... +....+.. .....+.+..++..+..|
T Consensus 327 ETLGc~~VICSDKTGTLTtN~Mtv~~i~~~~~~~~~~~~f~~tg~ty~~~g~v~~~~~~~~~~~~~~~~l~~l~~i~~lC 406 (972)
T KOG0202|consen 327 ETLGCVNVICSDKTGTLTTNQMTVSKIFIPDGGTATVDEFNPTGTTYSPEGEVFKDGLYEKDKAGDNDLLQELAEICALC 406 (972)
T ss_pred hhccceeEEecCCCCcccccceEEEEEEecccccccccccccCCceeCCCCceEecCccccccccccHHHHHHHHHHHhh
Confidence 9999999999999999999999999999987654322 00000000 011223344444455555
Q ss_pred ccCCceeecCCCCceecCCccHHHHHHHHHHcCCChHH---------------HhhhceEEEEecCCCCceeEEEEEEcC
Q 044020 294 NTGSKVVKDKDGKNSILGTPTESAILEFGLRLGGDFEA---------------QRREFKIVKVEPFNSVRKKMSVLIALP 358 (563)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~e~al~~~~~~~~~~~~~---------------~~~~~~~~~~~~f~~~~~~~sviv~~~ 358 (563)
|. +....+..+.++..|.|+|.||..++.+.+..-.. ..+.++....+||+++||+|+|.+..+
T Consensus 407 Nd-a~v~~~~~~~~~~~G~pTE~AL~vlaeKm~l~~~~~~~~s~~~~~~c~~~~~~~~~~~~elpFssdrK~Msv~c~~~ 485 (972)
T KOG0202|consen 407 ND-ATVEYNDADCYEKVGEPTEGALIVLAEKMGLPGTRSTNLSNEEASACNRVYSRLFKKIAELPFSSDRKSMSVKCSPA 485 (972)
T ss_pred hh-hhhhcCchhhHHhcCCchHHHHHHHHHHcCCCcchhhcccccccccchhHHHHhhhheeEeecccccceEEEEEecC
Confidence 54 33333333666778999999999999998865422 223456668999999999999999875
Q ss_pred CC--eEEEEEeCChhHHHhcccccccCCC-ccccCCHHHHHHHHHHHHHHHHHHHhHhHhhhhccCC-CC--------CC
Q 044020 359 AG--GMRAFCKGASEIVLSMCDKVVSDNG-EPVPLSEEQFRNITDVINGFASEALRTLCLAFKDLND-SS--------NE 426 (563)
Q Consensus 359 ~~--~~~~~~kG~~~~il~~c~~~~~~~~-~~~~~~~~~~~~i~~~~~~~~~~G~r~i~~a~~~l~~-~~--------~~ 426 (563)
.+ ++..|+||++|.++++|+.++..+| ..+|+++..++.+.+....++++|+||+++|+++.+. .. ..
T Consensus 486 ~~~~~~~~fvKGA~E~Vl~rcs~~~~~~g~~~~pLt~~~re~il~~~~~~g~~gLRvLalA~~~~~~~~~~~~~l~~~s~ 565 (972)
T KOG0202|consen 486 HGQSGYKMFVKGAPESVLERCSTYYGSDGQTKVPLTQASRETILANVYEMGSEGLRVLALASKDSPGQVPDDQDLNDTSN 565 (972)
T ss_pred CCCccceEEecCChHHHHHhhhcEEccCCceeeeCcHHHHHHHHHHHHHHhhccceEEEEEccCCcccChhhhhhccccc
Confidence 44 5899999999999999988887766 5599999999999999999999999999999998774 21 22
Q ss_pred CCCCCCCceEEEEecccCCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCC----ceeechhhhcCCC
Q 044020 427 NNIPDSGYTLIAVVGIKDPVRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAKECGILTSDG----EAVEGPEFRNMSP 502 (563)
Q Consensus 427 ~~~~~~~~~~lG~i~~~d~~~~~~~~~I~~l~~~gi~v~i~TGd~~~~a~~~a~~lgi~~~~~----~~~~g~~~~~~~~ 502 (563)
....|.|++|+|++++.||+|++++++|+.|+++||+|+|+|||+..+|.++|+++|+...+. .+++|.+++.++.
T Consensus 566 ~~~~E~~LtFvGlVGi~DPPR~ev~~ai~~c~~aGIrV~mITGD~~~TA~AI~r~iGi~~~~ed~~~~~~TG~efD~ls~ 645 (972)
T KOG0202|consen 566 RATAESDLTFVGLVGILDPPRPEVADAIELCRQAGIRVIMITGDNKETAEAIAREIGIFSEDEDVSSMALTGSEFDDLSD 645 (972)
T ss_pred ccccccceEEEEEeeccCCCchhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHhCCCcCCccccccccchhhhhcCCH
Confidence 346789999999999999999999999999999999999999999999999999999988765 7899999999987
Q ss_pred C---CCCcceeEEEecChhhHHHHHHHHHHhcCCEEEEEcCCccCHHHHhhCCceEeecCCCCC
Q 044020 503 A---DIIPKLQVMARSLPSDKHTLVTQLRNTFGEVVAVTGDGTNDASALHEADIGLAMGIAGTE 563 (563)
Q Consensus 503 ~---~~~~~~~v~~~~~p~~K~~~v~~l~~~~g~~v~~iGDg~ND~~~l~~a~vgiamg~~~~~ 563 (563)
+ +...+..+|+|++|.+|.++|+.||+. |+.|+|.|||.||.|+|+.||+|||||++|+|
T Consensus 646 ~~~~~~~~~~~vFaR~~P~HK~kIVeaLq~~-geivAMTGDGVNDApALK~AdIGIAMG~~GTd 708 (972)
T KOG0202|consen 646 EELDDAVRRVLVFARAEPQHKLKIVEALQSR-GEVVAMTGDGVNDAPALKKADIGIAMGISGTD 708 (972)
T ss_pred HHHHHHhhcceEEEecCchhHHHHHHHHHhc-CCEEEecCCCccchhhhhhcccceeecCCccH
Confidence 7 677888899999999999999999998 99999999999999999999999999999975
|
|
| >TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-92 Score=796.68 Aligned_cols=551 Identities=54% Similarity=0.793 Sum_probs=469.4
Q ss_pred chhhHHHHHHHHHHHHHHHhccCeeEEEECCEEEEeecCCcccCcEEEeCCCCeeeceEEEEeeCceEEEeccCcCCCCc
Q 044020 2 VTAISDYKQSLQFRDLDREKKKIFIQVTRDGQRQKVCTYDLVVGDIVHLSIGDQVPAYGIFISGHSLLIDESSLSGQSEP 81 (563)
Q Consensus 2 ~~~~~~~~~~~~~~~l~~~~~~~~~~V~r~g~~~~i~~~~L~~GDiI~v~~G~~iPaD~~ll~g~~l~Vdes~lTGes~p 81 (563)
++++.+|+++++++++++..++.+++|+|||++++|++++|+|||+|.|++||+|||||+|++|+.+.||||+|||||.|
T Consensus 144 i~~~~e~~~~~~~~~l~~~~~~~~~~ViRdG~~~~I~~~~Lv~GDiV~l~~Gd~IPaD~~li~g~~l~VdES~LTGES~p 223 (941)
T TIGR01517 144 VTAVNDYKKELQFRQLNREKSAQKIAVIRGGQEQQISIHDIVVGDIVSLSTGDVVPADGVFISGLSLEIDESSITGESDP 223 (941)
T ss_pred HHHHHHHHHHHHHHHHHhccCCCceEEEECCEEEEEeHHHCCCCCEEEECCCCEecccEEEEEcCcEEEEecccCCCCCc
Confidence 57789999999999998766788999999999999999999999999999999999999999997779999999999999
Q ss_pred ccccCC-CCeEEecceeecCcEEEEEEEEcccchhHHHHHHhccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 044020 82 RYMYEE-NPFLLAGTKVQGGSGKMLVTTVGMRTEWGKLMETLNEGGEDETPLQVKLNGVATIIGKIELFFSVLEFLVLIG 160 (563)
Q Consensus 82 ~~k~~~-~~~i~~Gt~v~~g~~~~~V~~tg~~t~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 160 (563)
+.|..+ .+++|+||.+.+|.+.++|++||.+|++|++.+.+..++ +++|+++.++++++++.++++.++++++++++.
T Consensus 224 v~K~~~~~n~v~~GT~v~~G~~~~iV~~tG~~T~~gki~~~~~~~~-~~t~l~~~~~~~~~~~~~~~l~~~~i~~~~~~~ 302 (941)
T TIGR01517 224 IKKGAPKDSFLLSGTVVNEGSGRMLVTAVGVNSFGGKLMMELRAEG-EDTPLQEKLSELAGLIGKFGMGSAVLLFLVLSL 302 (941)
T ss_pred ccccCCCCceEEeCCeEEeeEEEEEEEEeCCCcHHHHHHHhhccCC-CCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999754 468999999999999999999999999999999988755 568999999999999999888888877776644
Q ss_pred HHhhccccccccccccchhhHHHHHHHHHHHHhhhhccCCchHHHHHHHHHHHHHHHhhCCCeeecchhhhhcCCeeeee
Q 044020 161 RFLGEKVIHNEFTDWSSADALTLIDYFAVVVTIIDVAVPEGLPLAVTLSLAFAMKKLMNDGALVRHLSACETMGSASCIC 240 (563)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ili~~~P~~l~~~~~~~~~~~~~~l~~~~i~~k~~~~le~l~~v~~i~ 240 (563)
.+......... ... ......+...|..++++++++|||+||++++++++.+.++|+++|+++|+++++|.||++|++|
T Consensus 303 ~~~~~~~~~~~-~~~-~~~~~~~~~~~~~al~llv~~iP~~Lp~~vti~l~~~~~~mak~~ilvk~l~a~E~lg~v~~Ic 380 (941)
T TIGR01517 303 RYVFRIIRGDG-RDT-EEDAQTFLDHFIIAVTIVVVAVPEGLPLAVTIALAYSMKKMMKDNNLVRHLAACETMGSATAIC 380 (941)
T ss_pred HHHhhhccccc-ccc-chhhHHHHHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHHHhCCCEEechHHhhhccCceEEE
Confidence 32221110000 000 0112356778899999999999999999999999999999999999999999999999999999
Q ss_pred cccccccccCceEEEEEEEcCeeeeecCCCccccccccccHHHHHHHHHHHHhccCCceeecCCCCceecCCccHHHHHH
Q 044020 241 TDKTRMLTTNHMVVDKIWIANTISNVEGNNRKDILQSEISERVLDITLQAIFQNTGSKVVKDKDGKNSILGTPTESAILE 320 (563)
Q Consensus 241 ~DKTGTLT~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~al~~ 320 (563)
||||||||+|+|.|.+++..+..+..+... ........+++..++.+|+......+..+..+..|+|+|.|+++
T Consensus 381 ~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~------~~~~~~~~~~l~~~~~~~s~~~~~~~~~~~~~~~g~p~e~All~ 454 (941)
T TIGR01517 381 SDKTGTLTQNVMSVVQGYIGEQRFNVRDVL------RNVPKHVRNILVEGISLNSSSEEVVDRGGKRAFIGSKTECALLG 454 (941)
T ss_pred EcCcCceeeceEEEEEEEEecceEecCccc------ccCCHHHHHHHHHHHHhCCCCccccCCCCccccCCCccHHHHHH
Confidence 999999999999999998766543322110 01123344555566666655432222233346779999999999
Q ss_pred HHHHcCCChHHHhhhceEEEEecCCCCceeEEEEEEcCCCeEEEEEeCChhHHHhcccccccCCCccccCCHHHHHHHHH
Q 044020 321 FGLRLGGDFEAQRREFKIVKVEPFNSVRKKMSVLIALPAGGMRAFCKGASEIVLSMCDKVVSDNGEPVPLSEEQFRNITD 400 (563)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~sviv~~~~~~~~~~~kG~~~~il~~c~~~~~~~~~~~~~~~~~~~~i~~ 400 (563)
++.+.+.+....+..+++++.+||++++|+|+++++.+++.+++++||+||.++++|+.++..+|...++++ .++++.+
T Consensus 455 ~~~~~~~~~~~~~~~~~~~~~~pF~s~~k~msvv~~~~~~~~~~~~KGA~e~il~~c~~~~~~~g~~~~~~~-~~~~i~~ 533 (941)
T TIGR01517 455 FLLLLGRDYQEVRAEEKVVKIYPFNSERKFMSVVVKHSGGKVREFRKGASEIVLKPCRKRLDSNGEATPISD-DKDRCAD 533 (941)
T ss_pred HHHHcCCCHHHHHhhchhccccccCCCCCeEEEEEEeCCCcEEEEEECChHHHHHhhhHHhhcCCCcccCcH-HHHHHHH
Confidence 999888887777777888999999999999999999877789999999999999999987666787788887 7888999
Q ss_pred HHHHHHHHHHhHhHhhhhccCCCCCCC-CCCCCCceEEEEecccCCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHH
Q 044020 401 VINGFASEALRTLCLAFKDLNDSSNEN-NIPDSGYTLIAVVGIKDPVRPGVKEAVQTCLEAGITVRMVTGDNINTARAIA 479 (563)
Q Consensus 401 ~~~~~~~~G~r~i~~a~~~l~~~~~~~-~~~~~~~~~lG~i~~~d~~~~~~~~~I~~l~~~gi~v~i~TGd~~~~a~~~a 479 (563)
.++.++++|+|++++||++++.++... ...|++++|+|+++|+|++|++++++|++|+++|++++|+|||++.+|.++|
T Consensus 534 ~~~~~a~~G~Rvl~~A~~~~~~~~~~~~~~~e~~l~~lGli~~~Dplr~~~~~aI~~l~~aGI~v~miTGD~~~tA~~iA 613 (941)
T TIGR01517 534 VIEPLASDALRTICLAYRDFAPEEFPRKDYPNGGLTLIGVVGIKDPLRPGVREAVQECQRAGITVRMVTGDNIDTAKAIA 613 (941)
T ss_pred HHHHHHhcCCEEEEEEEEecCccccccccccccCcEEEEEeeccCCCchhHHHHHHHHHHCCCEEEEECCCChHHHHHHH
Confidence 999999999999999999987544322 2347899999999999999999999999999999999999999999999999
Q ss_pred HHcCCCCCCCceeechhhhcCCCC---CCCcceeEEEecChhhHHHHHHHHHHhcCCEEEEEcCCccCHHHHhhCCceEe
Q 044020 480 KECGILTSDGEAVEGPEFRNMSPA---DIIPKLQVMARSLPSDKHTLVTQLRNTFGEVVAVTGDGTNDASALHEADIGLA 556 (563)
Q Consensus 480 ~~lgi~~~~~~~~~g~~~~~~~~~---~~~~~~~v~~~~~p~~K~~~v~~l~~~~g~~v~~iGDg~ND~~~l~~a~vgia 556 (563)
+++||..++..+++|++++.+.++ ....+..+|+|++|+||.++|+.||+. |+.|+|+|||.||+|||++||||||
T Consensus 614 ~~~GI~~~~~~vi~G~~~~~l~~~el~~~i~~~~Vfar~sPe~K~~iV~~lq~~-g~vVam~GDGvNDapALk~AdVGIA 692 (941)
T TIGR01517 614 RNCGILTFGGLAMEGKEFRRLVYEEMDPILPKLRVLARSSPLDKQLLVLMLKDM-GEVVAVTGDGTNDAPALKLADVGFS 692 (941)
T ss_pred HHcCCCCCCceEeeHHHhhhCCHHHHHHHhccCeEEEECCHHHHHHHHHHHHHC-CCEEEEECCCCchHHHHHhCCccee
Confidence 999999888889999999887765 566777899999999999999999998 9999999999999999999999999
Q ss_pred ecCCCCC
Q 044020 557 MGIAGTE 563 (563)
Q Consensus 557 mg~~~~~ 563 (563)
||++|+|
T Consensus 693 mg~~gtd 699 (941)
T TIGR01517 693 MGISGTE 699 (941)
T ss_pred cCCCccH
Confidence 9977764
|
The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others. |
| >TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-90 Score=776.53 Aligned_cols=539 Identities=28% Similarity=0.444 Sum_probs=439.8
Q ss_pred chhhHHHHHHHHHHHHHHHhccCeeEEEECCEEEEeecCCcccCcEEEeCCCCeeeceEEEEeeCceEEEeccCcCCCCc
Q 044020 2 VTAISDYKQSLQFRDLDREKKKIFIQVTRDGQRQKVCTYDLVVGDIVHLSIGDQVPAYGIFISGHSLLIDESSLSGQSEP 81 (563)
Q Consensus 2 ~~~~~~~~~~~~~~~l~~~~~~~~~~V~r~g~~~~i~~~~L~~GDiI~v~~G~~iPaD~~ll~g~~l~Vdes~lTGes~p 81 (563)
++.+.||+.++..++|.+. .+.+++|+|||++++|+++||||||||.+++||+|||||+|++++.|.||||+|||||.|
T Consensus 97 i~~~QE~~aekal~aL~~l-~~~~~~ViRdg~~~~I~a~eLVpGDIv~L~~Gd~VPAD~rLi~~~~L~VDES~LTGES~p 175 (1053)
T TIGR01523 97 IGFIQEYKAEKTMDSLKNL-ASPMAHVIRNGKSDAIDSHDLVPGDICLLKTGDTIPADLRLIETKNFDTDEALLTGESLP 175 (1053)
T ss_pred HHHHHHHHHHHHHHHHhcc-CCCceEEEeCCeeeecCHhhCCCCCEEEECCCCEeeccEEEEEeCceEEEchhhcCCCCc
Confidence 4566777777777777764 456899999999999999999999999999999999999999998899999999999999
Q ss_pred ccccC--------------CCCeEEecceeecCcEEEEEEEEcccchhHHHHHHhccCCC--------------------
Q 044020 82 RYMYE--------------ENPFLLAGTKVQGGSGKMLVTTVGMRTEWGKLMETLNEGGE-------------------- 127 (563)
Q Consensus 82 ~~k~~--------------~~~~i~~Gt~v~~g~~~~~V~~tg~~t~~~~i~~~~~~~~~-------------------- 127 (563)
+.|.. ..+++|+||.|.+|.+.++|++||.+|.+|++.+.+.....
T Consensus 176 V~K~~~~~~~~~~~~~~~d~~n~lf~GT~V~~G~g~~vVvatG~~T~~GkIa~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (1053)
T TIGR01523 176 VIKDAHATFGKEEDTPIGDRINLAFSSSAVTKGRAKGICIATALNSEIGAIAAGLQGDGGLFQRPEKDDPNKRRKLNKWI 255 (1053)
T ss_pred eeccccccccccccCCcccCCCccccCceEEeeeEEEEEEEecCccHHHHHHHHHhhhhhccccccccccccchhhhccc
Confidence 99962 13679999999999999999999999999999998754321
Q ss_pred ---------------CCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccchhhHHHHHHHHHHHH
Q 044020 128 ---------------DETPLQVKLNGVATIIGKIELFFSVLEFLVLIGRFLGEKVIHNEFTDWSSADALTLIDYFAVVVT 192 (563)
Q Consensus 128 ---------------~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 192 (563)
.++|+++++++++.++..++++++++++++... . .+...+.++++
T Consensus 256 ~~~~~~~~~~~~~~~~~tpLq~~l~~l~~~l~~i~~~~~~~~~~~~~~---~-----------------~~~~~~~~av~ 315 (1053)
T TIGR01523 256 LKVTKKVTGAFLGLNVGTPLHRKLSKLAVILFCIAIIFAIIVMAAHKF---D-----------------VDKEVAIYAIC 315 (1053)
T ss_pred ccccccchhhccccCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhh---h-----------------hhHHHHHHHHH
Confidence 249999999999998877777666655543210 0 11345667889
Q ss_pred hhhhccCCchHHHHHHHHHHHHHHHhhCCCeeecchhhhhcCCeeeeecccccccccCceEEEEEEEcC-eeeeecCC--
Q 044020 193 IIDVAVPEGLPLAVTLSLAFAMKKLMNDGALVRHLSACETMGSASCICTDKTRMLTTNHMVVDKIWIAN-TISNVEGN-- 269 (563)
Q Consensus 193 ili~~~P~~l~~~~~~~~~~~~~~l~~~~i~~k~~~~le~l~~v~~i~~DKTGTLT~~~~~v~~i~~~~-~~~~~~~~-- 269 (563)
++++++|++||+.++++++.+.++|+++|+++|+++++|+||.+++||+|||||||+|+|.|.++|.++ ..+.....
T Consensus 316 l~Va~VPegLp~~vti~La~g~~rMak~~~lVr~L~avEtLG~vtvICsDKTGTLT~N~M~V~~i~~~~~~~~~~~~~~~ 395 (1053)
T TIGR01523 316 LAISIIPESLIAVLSITMAMGAANMSKRNVIVRKLDALEALGAVNDICSDKTGTITQGKMIARQIWIPRFGTISIDNSDD 395 (1053)
T ss_pred HHHHHcccchHHHHHHHHHHHHHHHHhcCCEeccchhhhhccCccEEEecCcCccccceEEEEEEEEcCCceEEecCCCC
Confidence 999999999999999999999999999999999999999999999999999999999999999999764 12211100
Q ss_pred --Ccc-----------------------ccc-------c-cc-----ccHHHHHHHHHHHHhccCCceeec-CCCCceec
Q 044020 270 --NRK-----------------------DIL-------Q-SE-----ISERVLDITLQAIFQNTGSKVVKD-KDGKNSIL 310 (563)
Q Consensus 270 --~~~-----------------------~~~-------~-~~-----~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 310 (563)
... ... . .. ..+....++..+.+ |+.+....+ .++.....
T Consensus 396 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~l-cn~a~~~~~~~~~~~~~~ 474 (1053)
T TIGR01523 396 AFNPNEGNVSGIPRFSPYEYSHNEAADQDILKEFKDELKEIDLPEDIDMDLFIKLLETAAL-ANIATVFKDDATDCWKAH 474 (1053)
T ss_pred CCCCcccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHh-ccCCeeeccCCCCceeeC
Confidence 000 000 0 00 01122334433444 444443322 22333567
Q ss_pred CCccHHHHHHHHHHcCCChH------HH-------------------hhhceEEEEecCCCCceeEEEEEEcCCC-eEEE
Q 044020 311 GTPTESAILEFGLRLGGDFE------AQ-------------------RREFKIVKVEPFNSVRKKMSVLIALPAG-GMRA 364 (563)
Q Consensus 311 ~~~~e~al~~~~~~~~~~~~------~~-------------------~~~~~~~~~~~f~~~~~~~sviv~~~~~-~~~~ 364 (563)
|+|+|.|+++++.+.|++.. .. ...|+++..+||+++||||+++++.+++ .+++
T Consensus 475 GdptE~ALl~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pFds~rK~msvv~~~~~~~~~~~ 554 (1053)
T TIGR01523 475 GDPTEIAIHVFAKKFDLPHNALTGEEDLLKSNENDQSSLSQHNEKPGSAQFEFIAEFPFDSEIKRMASIYEDNHGETYNI 554 (1053)
T ss_pred cCccHHHHHHHHHHcCCCcccccchhhhhhhccccccccccccccccccccceEEEeccCCCCCeEEEEEEeCCCCEEEE
Confidence 99999999999998886421 11 2347899999999999999999987644 5889
Q ss_pred EEeCChhHHHhcccccccCCC-ccccCCHHHHHHHHHHHHHHHHHHHhHhHhhhhccCCCCC----------CCCCCCCC
Q 044020 365 FCKGASEIVLSMCDKVVSDNG-EPVPLSEEQFRNITDVINGFASEALRTLCLAFKDLNDSSN----------ENNIPDSG 433 (563)
Q Consensus 365 ~~kG~~~~il~~c~~~~~~~~-~~~~~~~~~~~~i~~~~~~~~~~G~r~i~~a~~~l~~~~~----------~~~~~~~~ 433 (563)
|+||+||.|+++|+.....+| ...+++++.++++.+.+++|+++|+||+++|||+++..+. .....|.|
T Consensus 555 ~~KGApe~il~~c~~~~~~~~~~~~~l~~~~~~~i~~~~~~~a~~GlRvLa~A~r~l~~~~~~~~~~~~~~~~~~~~e~~ 634 (1053)
T TIGR01523 555 YAKGAFERIIECCSSSNGKDGVKISPLEDCDRELIIANMESLAAEGLRVLAFASKSFDKADNNDDQLKNETLNRATAESD 634 (1053)
T ss_pred EEeCChHHHHHhhhHhhcCCCCccccCCHHHHHHHHHHHHHHHhcCCeEEEEEEEECCchhccchhhhccccchhhhccC
Confidence 999999999999997665444 5678999999999999999999999999999999875421 12346899
Q ss_pred ceEEEEecccCCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCC----------CCceeechhhhcCCCC
Q 044020 434 YTLIAVVGIKDPVRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAKECGILTS----------DGEAVEGPEFRNMSPA 503 (563)
Q Consensus 434 ~~~lG~i~~~d~~~~~~~~~I~~l~~~gi~v~i~TGd~~~~a~~~a~~lgi~~~----------~~~~~~g~~~~~~~~~ 503 (563)
++|+|+++|+|++|++++++|++|+++||+|+|+|||++.+|.++|+++||... ...+++|.+++.+.++
T Consensus 635 L~~~G~~~~~Dp~r~~v~~aI~~l~~aGIkv~MiTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~vitG~~l~~l~~~ 714 (1053)
T TIGR01523 635 LEFLGLIGIYDPPRNESAGAVEKCHQAGINVHMLTGDFPETAKAIAQEVGIIPPNFIHDRDEIMDSMVMTGSQFDALSDE 714 (1053)
T ss_pred CEEEEEEeeecCCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCccccccccccccceeeehHHhhhcCHH
Confidence 999999999999999999999999999999999999999999999999999754 3578999999888765
Q ss_pred ---CCCcceeEEEecChhhHHHHHHHHHHhcCCEEEEEcCCccCHHHHhhCCceEeecCCCCC
Q 044020 504 ---DIIPKLQVMARSLPSDKHTLVTQLRNTFGEVVAVTGDGTNDASALHEADIGLAMGIAGTE 563 (563)
Q Consensus 504 ---~~~~~~~v~~~~~p~~K~~~v~~l~~~~g~~v~~iGDg~ND~~~l~~a~vgiamg~~~~~ 563 (563)
+...+..+|+|++|+||.++|+.+|+. |+.|+|+|||.||+|||++||||||||++|+|
T Consensus 715 ~l~~~~~~~~V~ar~sP~~K~~iV~~lq~~-g~~Vam~GDGvNDapaLk~AdVGIAmg~~gt~ 776 (1053)
T TIGR01523 715 EVDDLKALCLVIARCAPQTKVKMIEALHRR-KAFCAMTGDGVNDSPSLKMANVGIAMGINGSD 776 (1053)
T ss_pred HHHHHhhcCeEEEecCHHHHHHHHHHHHhc-CCeeEEeCCCcchHHHHHhCCccEecCCCccH
Confidence 455667799999999999999999998 99999999999999999999999999977764
|
The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump. |
| >TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.5e-90 Score=776.65 Aligned_cols=542 Identities=30% Similarity=0.435 Sum_probs=451.1
Q ss_pred chhhHHHHHHHHHHHHHHHhc---cCeeEEEECCEEEEeecCCcccCcEEEeCCCCeeeceEEEEeeCceEEEeccCcCC
Q 044020 2 VTAISDYKQSLQFRDLDREKK---KIFIQVTRDGQRQKVCTYDLVVGDIVHLSIGDQVPAYGIFISGHSLLIDESSLSGQ 78 (563)
Q Consensus 2 ~~~~~~~~~~~~~~~l~~~~~---~~~~~V~r~g~~~~i~~~~L~~GDiI~v~~G~~iPaD~~ll~g~~l~Vdes~lTGe 78 (563)
++++..|.++++.++..+.++ +.+++|+|||++++|++++|+|||+|.|++||+|||||++++|+.+.||||+||||
T Consensus 116 i~~~i~~~qe~ka~~~l~~l~~~~~~~~~ViRdg~~~~I~~~~lv~GDiv~l~~Gd~IPaD~~il~~~~l~VdeS~LTGE 195 (997)
T TIGR01106 116 ITGCFSYYQEAKSSKIMESFKNMVPQQALVIRDGEKMSINAEQVVVGDLVEVKGGDRIPADLRIISAQGCKVDNSSLTGE 195 (997)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccCCCeeEEEECCEEEEeeHHHCCCCCEEEECCCCEEeeeEEEEEccCcEEEccccCCC
Confidence 466667777777766655544 45899999999999999999999999999999999999999998789999999999
Q ss_pred CCcccccCCC---------CeEEecceeecCcEEEEEEEEcccchhHHHHHHhccCCCCCCchHHHHHHHHHHHHHHHHH
Q 044020 79 SEPRYMYEEN---------PFLLAGTKVQGGSGKMLVTTVGMRTEWGKLMETLNEGGEDETPLQVKLNGVATIIGKIELF 149 (563)
Q Consensus 79 s~p~~k~~~~---------~~i~~Gt~v~~g~~~~~V~~tg~~t~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 149 (563)
|.|+.|..++ +++|+||.+.+|.+.++|++||.+|.+|++.+.+..++.+++|+++.++++++++..++++
T Consensus 196 S~pv~K~~~~~~~~~~~~~n~l~~Gt~v~~G~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~pl~~~~~~~~~~~~~~~~~ 275 (997)
T TIGR01106 196 SEPQTRSPEFTHENPLETRNIAFFSTNCVEGTARGIVVNTGDRTVMGRIASLASGLENGKTPIAIEIEHFIHIITGVAVF 275 (997)
T ss_pred CCceeccCCCcccCccccCCeEEeccEeeeeeEEEEEEEccccchhhHHHhhhhhcccCCCcHHHHHHHHHHHHHHHHHH
Confidence 9999997543 4799999999999999999999999999999998887888999999999999998888777
Q ss_pred HHHHHHHHHHHHHhhccccccccccccchhhHHHHHHHHHHHHhhhhccCCchHHHHHHHHHHHHHHHhhCCCeeecchh
Q 044020 150 FSVLEFLVLIGRFLGEKVIHNEFTDWSSADALTLIDYFAVVVTIIDVAVPEGLPLAVTLSLAFAMKKLMNDGALVRHLSA 229 (563)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ili~~~P~~l~~~~~~~~~~~~~~l~~~~i~~k~~~~ 229 (563)
++++.++++... . ..+...+.+++++++++|||+||++++++++.+.++|+++|+++|++++
T Consensus 276 ~~~~~~~~~~~~--~----------------~~~~~~~~~~i~v~v~~iP~~L~~~v~i~l~~~~~~m~~~~ilvk~~~a 337 (997)
T TIGR01106 276 LGVSFFILSLIL--G----------------YTWLEAVIFLIGIIVANVPEGLLATVTVCLTLTAKRMARKNCLVKNLEA 337 (997)
T ss_pred HHHHHHHHHHHh--c----------------CCHHHHHHHHHHHHhhcCCccchHHHHHHHHHHHHHHHHCCcEecCcHH
Confidence 666655544211 1 1234567788899999999999999999999999999999999999999
Q ss_pred hhhcCCeeeeecccccccccCceEEEEEEEcCeeeeecCCCccccccccccHHHHHHHHHHHHhccCCceeecCCC----
Q 044020 230 CETMGSASCICTDKTRMLTTNHMVVDKIWIANTISNVEGNNRKDILQSEISERVLDITLQAIFQNTGSKVVKDKDG---- 305 (563)
Q Consensus 230 le~l~~v~~i~~DKTGTLT~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 305 (563)
+|+||++|++|||||||||+|+|.|.+++.++..+..+.................+.+...+.+|+.+.+..+.++
T Consensus 338 iE~lg~v~~ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~alcn~~~~~~~~~~~~~~ 417 (997)
T TIGR01106 338 VETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEADTTEDQSGVSFDKSSATWLALSRIAGLCNRAVFKAGQENVPIL 417 (997)
T ss_pred HHHhcCCCEEEECCCCceecCceEEEEEEECCeEEecCCccCCCCccCCcccHHHHHHHHHHHHcCCCeeccccCCCccc
Confidence 9999999999999999999999999999988776543221110000001111223334444555555544332222
Q ss_pred CceecCCccHHHHHHHHHHcCCChHHHhhhceEEEEecCCCCceeEEEEEEcC---CCeEEEEEeCChhHHHhccccccc
Q 044020 306 KNSILGTPTESAILEFGLRLGGDFEAQRREFKIVKVEPFNSVRKKMSVLIALP---AGGMRAFCKGASEIVLSMCDKVVS 382 (563)
Q Consensus 306 ~~~~~~~~~e~al~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~sviv~~~---~~~~~~~~kG~~~~il~~c~~~~~ 382 (563)
.....|+|+|.|+++++.+.+.+....+..++.+..+||+++||+|+++++.. ++.+++|+||+||.|+++|+.++
T Consensus 418 ~~~~~gdp~E~ALl~~a~~~~~~~~~~~~~~~~v~~~pF~s~rK~m~~v~~~~~~~~~~~~~~~KGApe~Il~~c~~~~- 496 (997)
T TIGR01106 418 KRAVAGDASESALLKCIELCLGSVMEMRERNPKVVEIPFNSTNKYQLSIHENEDPRDPRHLLVMKGAPERILERCSSIL- 496 (997)
T ss_pred ccccCcChHHHHHHHHHHHhCCCHHHHHhhCceeEEeccCCCCceEEEEEeccCCCCceEEEEEeCChHHHHHHhhHHh-
Confidence 23567999999999999877767777778899999999999999999988643 34688999999999999999876
Q ss_pred CCCccccCCHHHHHHHHHHHHHHHHHHHhHhHhhhhccCCCCCCC---------CCCCCCceEEEEecccCCCCcchHHH
Q 044020 383 DNGEPVPLSEEQFRNITDVINGFASEALRTLCLAFKDLNDSSNEN---------NIPDSGYTLIAVVGIKDPVRPGVKEA 453 (563)
Q Consensus 383 ~~~~~~~~~~~~~~~i~~~~~~~~~~G~r~i~~a~~~l~~~~~~~---------~~~~~~~~~lG~i~~~d~~~~~~~~~ 453 (563)
.+|+..+++++.++.+.+.+++++++|+|++++|||.++.++... +..|+|++|+|+++++||+|++++++
T Consensus 497 ~~g~~~~l~~~~~~~~~~~~~~~a~~GlRvla~A~k~l~~~~~~~~~~~~~~~~~~~e~~L~flGli~i~Dplr~~v~~a 576 (997)
T TIGR01106 497 IHGKEQPLDEELKEAFQNAYLELGGLGERVLGFCHLYLPDEQFPEGFQFDTDDVNFPTDNLCFVGLISMIDPPRAAVPDA 576 (997)
T ss_pred cCCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEEEeecCcccccccccccchhhhccccCcEEEEEEeccCCChHHHHHH
Confidence 468888999999999999999999999999999999886542211 23488999999999999999999999
Q ss_pred HHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCC------------------------CceeechhhhcCCCC---CCC
Q 044020 454 VQTCLEAGITVRMVTGDNINTARAIAKECGILTSD------------------------GEAVEGPEFRNMSPA---DII 506 (563)
Q Consensus 454 I~~l~~~gi~v~i~TGd~~~~a~~~a~~lgi~~~~------------------------~~~~~g~~~~~~~~~---~~~ 506 (563)
|++|+++|++|+|+|||++.+|.++|+++|+..++ ..+++|.+++.+.++ +..
T Consensus 577 I~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~vi~G~~l~~l~~~el~~~~ 656 (997)
T TIGR01106 577 VGKCRSAGIKVIMVTGDHPITAKAIAKGVGIISEGNETVEDIAARLNIPVSQVNPRDAKACVVHGSDLKDMTSEQLDEIL 656 (997)
T ss_pred HHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCccchhhhhhhccccccccccccccceEEEhHHhhhCCHHHHHHHH
Confidence 99999999999999999999999999999996532 258999999888765 333
Q ss_pred cce--eEEEecChhhHHHHHHHHHHhcCCEEEEEcCCccCHHHHhhCCceEeecCCCCC
Q 044020 507 PKL--QVMARSLPSDKHTLVTQLRNTFGEVVAVTGDGTNDASALHEADIGLAMGIAGTE 563 (563)
Q Consensus 507 ~~~--~v~~~~~p~~K~~~v~~l~~~~g~~v~~iGDg~ND~~~l~~a~vgiamg~~~~~ 563 (563)
.+. .||+|++|+||..+|+.+|+. |+.|+|+|||.||+|||++||||||||++|+|
T Consensus 657 ~~~~~~VfaR~sPeqK~~IV~~lq~~-g~vv~~~GDG~ND~paLk~AdVGiamg~~G~~ 714 (997)
T TIGR01106 657 KYHTEIVFARTSPQQKLIIVEGCQRQ-GAIVAVTGDGVNDSPALKKADIGVAMGIAGSD 714 (997)
T ss_pred HhcCCEEEEECCHHHHHHHHHHHHHC-CCEEEEECCCcccHHHHhhCCcceecCCcccH
Confidence 333 499999999999999999998 99999999999999999999999999966764
|
Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps. |
| >TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-88 Score=758.24 Aligned_cols=549 Identities=35% Similarity=0.530 Sum_probs=449.2
Q ss_pred hhhHHHHHHHHHHHHHHHhccCeeEEEECCEEEEeecCCcccCcEEEeCCCCeeeceEEEEeeCceEEEeccCcCCCCcc
Q 044020 3 TAISDYKQSLQFRDLDREKKKIFIQVTRDGQRQKVCTYDLVVGDIVHLSIGDQVPAYGIFISGHSLLIDESSLSGQSEPR 82 (563)
Q Consensus 3 ~~~~~~~~~~~~~~l~~~~~~~~~~V~r~g~~~~i~~~~L~~GDiI~v~~G~~iPaD~~ll~g~~l~Vdes~lTGes~p~ 82 (563)
+.+.+++.++..+++.+ ..+.+++|+|||+++.|++++|||||||.|++||+|||||+|++|+.+.||||+|||||.|+
T Consensus 53 ~~~qe~~a~~~~~~L~~-~~~~~~~ViRdg~~~~I~~~~Lv~GDiv~l~~Gd~IPaD~~ll~~~~l~VdeS~LTGES~pv 131 (917)
T TIGR01116 53 GVWQERNAEKAIEALKE-YESEHAKVLRDGRWSVIKAKDLVPGDIVELAVGDKVPADIRVLSLKTLRVDQSILTGESVSV 131 (917)
T ss_pred HHHHHHHHHHHHHHHhc-cCCCceEEEECCEEEEEEHHHCCCCCEEEECCCCEeeccEEEEEecceEEEcccccCCCCcc
Confidence 44556666666666654 34668999999999999999999999999999999999999999987899999999999999
Q ss_pred cccCC------------CCeEEecceeecCcEEEEEEEEcccchhHHHHHHhccCCCCCCchHHHHHHHHHHHHHHHHHH
Q 044020 83 YMYEE------------NPFLLAGTKVQGGSGKMLVTTVGMRTEWGKLMETLNEGGEDETPLQVKLNGVATIIGKIELFF 150 (563)
Q Consensus 83 ~k~~~------------~~~i~~Gt~v~~g~~~~~V~~tg~~t~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 150 (563)
.|..+ ++++|+||.+.+|++.++|++||.+|.+|++.+.+..++.+++|+++.+++++.++..+.+++
T Consensus 132 ~K~~~~~~~~~~~~~~~~n~l~~GT~v~~G~~~~~V~~tG~~T~~gki~~~~~~~~~~~t~lq~~l~~~~~~l~~~~~~~ 211 (917)
T TIGR01116 132 NKHTESVPDERAVNQDKKNMLFSGTLVVAGKARGVVVRTGMSTEIGKIRDEMRAAEQEDTPLQKKLDEFGELLSKVIGLI 211 (917)
T ss_pred cccccccCccccCcccccceeeeCCEEecceEEEEEEEeCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 99643 378999999999999999999999999999999998888889999999999999988877766
Q ss_pred HHHHHHHHHHHHhhccccccccccccchhhHHHHHHHHHHHHhhhhccCCchHHHHHHHHHHHHHHHhhCCCeeecchhh
Q 044020 151 SVLEFLVLIGRFLGEKVIHNEFTDWSSADALTLIDYFAVVVTIIDVAVPEGLPLAVTLSLAFAMKKLMNDGALVRHLSAC 230 (563)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ili~~~P~~l~~~~~~~~~~~~~~l~~~~i~~k~~~~l 230 (563)
+++++++++..+... .....|. ..+...+..++++++++||++||++++++++.+.++|+++|+++|+++++
T Consensus 212 ~~i~~~~~~~~~~~~----~~~~~~~----~~~~~~~~~~i~l~v~~iP~~Lp~~vti~l~~~~~~m~~~~ilvk~~~~i 283 (917)
T TIGR01116 212 CILVWVINIGHFNDP----ALGGGWI----QGAIYYFKIAVALAVAAIPEGLPAVITTCLALGTRKMAKKNAIVRKLPSV 283 (917)
T ss_pred HHHHHHHHHHHhccc----cccchhH----HHHHHHHHHHHhhhhhccccccHHHHHHHHHHHHHHHHHCCcEecCcHHH
Confidence 666555443221100 0001121 23556677788999999999999999999999999999999999999999
Q ss_pred hhcCCeeeeecccccccccCceEEEEEEEcCeee------eecCCCc---ccccc-----ccccHHHHHHHHHHHHhccC
Q 044020 231 ETMGSASCICTDKTRMLTTNHMVVDKIWIANTIS------NVEGNNR---KDILQ-----SEISERVLDITLQAIFQNTG 296 (563)
Q Consensus 231 e~l~~v~~i~~DKTGTLT~~~~~v~~i~~~~~~~------~~~~~~~---~~~~~-----~~~~~~~~~~~~~~~~~~~~ 296 (563)
|+||++|++|||||||||+|+|+|.+++..+..+ ....... ..... ..........+..++..|+.
T Consensus 284 E~lg~v~~ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~lc~~ 363 (917)
T TIGR01116 284 ETLGCTTVICSDKTGTLTTNQMSVCKVVALDPSSSSLNEFCVTGTTYAPEGGVIKDDGPVAGGQDAGLEELATIAALCND 363 (917)
T ss_pred HhccCceEEEecCCccccCCeEEEEEEEecCCcccccceEEecCCccCCCccccccCCcccccchHHHHHHHHHHHhcCC
Confidence 9999999999999999999999999998865321 1111000 00000 00011223344445555665
Q ss_pred CceeecC-CCCceecCCccHHHHHHHHHHcCCChHH----------------HhhhceEEEEecCCCCceeEEEEEEcCC
Q 044020 297 SKVVKDK-DGKNSILGTPTESAILEFGLRLGGDFEA----------------QRREFKIVKVEPFNSVRKKMSVLIALPA 359 (563)
Q Consensus 297 ~~~~~~~-~~~~~~~~~~~e~al~~~~~~~~~~~~~----------------~~~~~~~~~~~~f~~~~~~~sviv~~~~ 359 (563)
+.+..++ ++.....|+|+|.|+++++.+.|.+... .++.+++++.+||+++||||+++++.+
T Consensus 364 ~~~~~~~~~~~~~~~gdp~E~ALl~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pF~s~rK~msviv~~~- 442 (917)
T TIGR01116 364 SSLDFNERKGVYEKVGEATEAALKVLVEKMGLPATKNGVSSKRRPALGCNSVWNDKFKKLATLEFSRDRKSMSVLCKPS- 442 (917)
T ss_pred CeeeccccCCceeeccChhHHHHHHHHHHcCCCchhcccccccccccchhHHHHhhcceeeecccChhhCeEEEEEeeC-
Confidence 5543322 2223446899999999999988866432 245678999999999999999999864
Q ss_pred CeEEEEEeCChhHHHhcccccccCCCccccCCHHHHHHHHHHHHHHHH-HHHhHhHhhhhccCCCCC--------CCCCC
Q 044020 360 GGMRAFCKGASEIVLSMCDKVVSDNGEPVPLSEEQFRNITDVINGFAS-EALRTLCLAFKDLNDSSN--------ENNIP 430 (563)
Q Consensus 360 ~~~~~~~kG~~~~il~~c~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~G~r~i~~a~~~l~~~~~--------~~~~~ 430 (563)
+++++|+||+||.|+++|+.++.++|...+++++.++++.+.++++++ +|+||+++|||.++.+.. ..+.+
T Consensus 443 ~~~~~~~KGApe~il~~c~~~~~~~g~~~~l~~~~~~~i~~~~~~~a~~~GlRvl~~A~k~~~~~~~~~~~~~~~~~~~~ 522 (917)
T TIGR01116 443 TGNKLFVKGAPEGVLERCTHILNGDGRAVPLTDKMKNTILSVIKEMGTTKALRCLALAFKDIPDPREEDLLSDPANFEAI 522 (917)
T ss_pred CcEEEEEcCChHHHHHhccceecCCCCeeeCCHHHHHHHHHHHHHHHhhcCCeEEEEEEEECCccccccccccchhhhhh
Confidence 668899999999999999988877788899999999999999999999 999999999999865321 11356
Q ss_pred CCCceEEEEecccCCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCC----ceeechhhhcCCCC---
Q 044020 431 DSGYTLIAVVGIKDPVRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAKECGILTSDG----EAVEGPEFRNMSPA--- 503 (563)
Q Consensus 431 ~~~~~~lG~i~~~d~~~~~~~~~I~~l~~~gi~v~i~TGd~~~~a~~~a~~lgi~~~~~----~~~~g~~~~~~~~~--- 503 (563)
|++++|+|+++++||+|++++++|++|+++|++++|+|||+..+|.++|+++|+..++. ..++|.+++.+..+
T Consensus 523 e~~l~~lGl~~~~Dplr~~v~e~I~~l~~aGI~v~miTGD~~~tA~~ia~~~gi~~~~~~v~~~~~~g~~l~~~~~~~~~ 602 (917)
T TIGR01116 523 ESDLTFIGVVGMLDPPRPEVADAIEKCRTAGIRVIMITGDNKETAEAICRRIGIFSPDEDVTFKSFTGREFDEMGPAKQR 602 (917)
T ss_pred cCCcEEEEEeeeeCCCchhHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHcCCCCCCccccceeeeHHHHhhCCHHHHH
Confidence 89999999999999999999999999999999999999999999999999999976543 46788888877654
Q ss_pred CCCcceeEEEecChhhHHHHHHHHHHhcCCEEEEEcCCccCHHHHhhCCceEeecCCCCC
Q 044020 504 DIIPKLQVMARSLPSDKHTLVTQLRNTFGEVVAVTGDGTNDASALHEADIGLAMGIAGTE 563 (563)
Q Consensus 504 ~~~~~~~v~~~~~p~~K~~~v~~l~~~~g~~v~~iGDg~ND~~~l~~a~vgiamg~~~~~ 563 (563)
....+..+|+|++|+||.++++.+|+. |+.|+|+|||.||++||++||+||||| +|+|
T Consensus 603 ~~~~~~~v~ar~~P~~K~~iV~~lq~~-g~~va~iGDG~ND~~alk~AdVGia~g-~g~~ 660 (917)
T TIGR01116 603 AACRSAVLFSRVEPSHKSELVELLQEQ-GEIVAMTGDGVNDAPALKKADIGIAMG-SGTE 660 (917)
T ss_pred HhhhcCeEEEecCHHHHHHHHHHHHhc-CCeEEEecCCcchHHHHHhCCeeEECC-CCcH
Confidence 455667899999999999999999987 999999999999999999999999999 8764
|
The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522. |
| >PRK10517 magnesium-transporting ATPase MgtA; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-88 Score=749.83 Aligned_cols=505 Identities=27% Similarity=0.393 Sum_probs=427.2
Q ss_pred hHHHHHHHHHHHHHHHhccCeeEEEEC------CEEEEeecCCcccCcEEEeCCCCeeeceEEEEeeCceEEEeccCcCC
Q 044020 5 ISDYKQSLQFRDLDREKKKIFIQVTRD------GQRQKVCTYDLVVGDIVHLSIGDQVPAYGIFISGHSLLIDESSLSGQ 78 (563)
Q Consensus 5 ~~~~~~~~~~~~l~~~~~~~~~~V~r~------g~~~~i~~~~L~~GDiI~v~~G~~iPaD~~ll~g~~l~Vdes~lTGe 78 (563)
+.+++.++..++|.+. .+.+++|+|| |++++|++++|+|||+|.|++||+|||||+|++|+++.||||+||||
T Consensus 141 ~qe~ra~~~~~~L~~l-~~~~a~ViR~g~~~~~g~~~~I~~~eLvpGDiV~l~~Gd~IPaDg~li~g~~l~VDES~LTGE 219 (902)
T PRK10517 141 IQEARSTKAADALKAM-VSNTATVLRVINDKGENGWLEIPIDQLVPGDIIKLAAGDMIPADLRILQARDLFVAQASLTGE 219 (902)
T ss_pred HHHHHHHHHHHHHHhh-CCCeEEEEECCccCCCCeEEEEEHHhCCCCCEEEECCCCEEeeeEEEEEcCceEEEecCcCCC
Confidence 3444444445555544 3567999999 78999999999999999999999999999999998889999999999
Q ss_pred CCcccccCCC------------CeEEecceeecCcEEEEEEEEcccchhHHHHHHhccCCCCCCchHHHHHHHHHHHHHH
Q 044020 79 SEPRYMYEEN------------PFLLAGTKVQGGSGKMLVTTVGMRTEWGKLMETLNEGGEDETPLQVKLNGVATIIGKI 146 (563)
Q Consensus 79 s~p~~k~~~~------------~~i~~Gt~v~~g~~~~~V~~tg~~t~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (563)
|.|+.|..++ +++|+||.|.+|++.++|++||.+|++|++.+.+.+++.+++|+++.++++++++..+
T Consensus 220 S~PV~K~~~~~~~~~~~~~~~~n~vfaGT~V~~G~~~~vV~atG~~T~~GkI~~~v~~~~~~~t~lq~~~~~i~~~l~~~ 299 (902)
T PRK10517 220 SLPVEKFATTRQPEHSNPLECDTLCFMGTNVVSGTAQAVVIATGANTWFGQLAGRVSEQDSEPNAFQQGISRVSWLLIRF 299 (902)
T ss_pred CCceecccccccccccCccccccceeeCceEeeeeEEEEEEEeccccHHHHHHHHhhccCCCCCcHHHHHHHHHHHHHHH
Confidence 9999997543 4799999999999999999999999999999999988888999999999999998888
Q ss_pred HHHHHHHHHHHHHHHHhhccccccccccccchhhHHHHHHHHHHHHhhhhccCCchHHHHHHHHHHHHHHHhhCCCeeec
Q 044020 147 ELFFSVLEFLVLIGRFLGEKVIHNEFTDWSSADALTLIDYFAVVVTIIDVAVPEGLPLAVTLSLAFAMKKLMNDGALVRH 226 (563)
Q Consensus 147 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ili~~~P~~l~~~~~~~~~~~~~~l~~~~i~~k~ 226 (563)
+++++.++++++.+ .. ..+...+.+++++++++|||+||++++++++.+.++|+++|+++|+
T Consensus 300 ~~~~~~~v~~i~~~--~~----------------~~~~~~l~~alsv~V~~~Pe~LP~~vt~~la~g~~~mak~~ilVk~ 361 (902)
T PRK10517 300 MLVMAPVVLLINGY--TK----------------GDWWEAALFALSVAVGLTPEMLPMIVTSTLARGAVKLSKQKVIVKR 361 (902)
T ss_pred HHHHHHHhhhHHHH--hc----------------CCHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHhCCcEEec
Confidence 77766665554321 10 1245677889999999999999999999999999999999999999
Q ss_pred chhhhhcCCeeeeecccccccccCceEEEEEEEcCeeeeecCCCccccccccccHHHHHHHHHHHHhccCCceeecCCCC
Q 044020 227 LSACETMGSASCICTDKTRMLTTNHMVVDKIWIANTISNVEGNNRKDILQSEISERVLDITLQAIFQNTGSKVVKDKDGK 306 (563)
Q Consensus 227 ~~~le~l~~v~~i~~DKTGTLT~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (563)
++++|+||++|++|||||||||+|+|.|.++...... ..++++ ..+.. +....
T Consensus 362 l~aiE~lg~v~vic~DKTGTLT~n~m~V~~~~~~~~~---------------~~~~ll---~~a~l-~~~~~-------- 414 (902)
T PRK10517 362 LDAIQNFGAMDILCTDKTGTLTQDKIVLENHTDISGK---------------TSERVL---HSAWL-NSHYQ-------- 414 (902)
T ss_pred chhhhhccCCCEEEecCCCccccceEEEEEEecCCCC---------------CHHHHH---HHHHh-cCCcC--------
Confidence 9999999999999999999999999999886321110 011222 22222 22110
Q ss_pred ceecCCccHHHHHHHHHHcCCChHHHhhhceEEEEecCCCCceeEEEEEEcCCCeEEEEEeCChhHHHhcccccccCCCc
Q 044020 307 NSILGTPTESAILEFGLRLGGDFEAQRREFKIVKVEPFNSVRKKMSVLIALPAGGMRAFCKGASEIVLSMCDKVVSDNGE 386 (563)
Q Consensus 307 ~~~~~~~~e~al~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~sviv~~~~~~~~~~~kG~~~~il~~c~~~~~~~~~ 386 (563)
...+||+|.|+++++...+ .......++.+..+||++++|+|+++++..++.+.+++||+||.++++|+.+.. +|.
T Consensus 415 -~~~~~p~d~All~~a~~~~--~~~~~~~~~~~~~~pFds~~k~msvvv~~~~~~~~~~~KGa~e~il~~c~~~~~-~~~ 490 (902)
T PRK10517 415 -TGLKNLLDTAVLEGVDEES--ARSLASRWQKIDEIPFDFERRRMSVVVAENTEHHQLICKGALEEILNVCSQVRH-NGE 490 (902)
T ss_pred -CCCCCHHHHHHHHHHHhcc--hhhhhhcCceEEEeeeCCCcceEEEEEEECCCeEEEEEeCchHHHHHhchhhhc-CCC
Confidence 1247999999999986543 122345678899999999999999999877777889999999999999997654 566
Q ss_pred cccCCHHHHHHHHHHHHHHHHHHHhHhHhhhhccCCCCCCCC-CCCCCceEEEEecccCCCCcchHHHHHHHHhCCCeEE
Q 044020 387 PVPLSEEQFRNITDVINGFASEALRTLCLAFKDLNDSSNENN-IPDSGYTLIAVVGIKDPVRPGVKEAVQTCLEAGITVR 465 (563)
Q Consensus 387 ~~~~~~~~~~~i~~~~~~~~~~G~r~i~~a~~~l~~~~~~~~-~~~~~~~~lG~i~~~d~~~~~~~~~I~~l~~~gi~v~ 465 (563)
..+++++.++.+.+..+.++++|+|++++|||+++..+.... ..|.|++|+|+++|+||+||+++++|++|+++||+|+
T Consensus 491 ~~~l~~~~~~~i~~~~~~~a~~G~rvlavA~k~~~~~~~~~~~~~e~~l~~lGli~~~Dp~R~~a~~aI~~l~~aGI~v~ 570 (902)
T PRK10517 491 IVPLDDIMLRRIKRVTDTLNRQGLRVVAVATKYLPAREGDYQRADESDLILEGYIAFLDPPKETTAPALKALKASGVTVK 570 (902)
T ss_pred eecCCHHHHHHHHHHHHHHHhcCCEEEEEEEecCCccccccccccccCceeeehHhhhCcchhhHHHHHHHHHHCCCEEE
Confidence 788999999999999999999999999999998865433221 2377999999999999999999999999999999999
Q ss_pred EEcCCCHHHHHHHHHHcCCCCCCCceeechhhhcCCCC---CCCcceeEEEecChhhHHHHHHHHHHhcCCEEEEEcCCc
Q 044020 466 MVTGDNINTARAIAKECGILTSDGEAVEGPEFRNMSPA---DIIPKLQVMARSLPSDKHTLVTQLRNTFGEVVAVTGDGT 542 (563)
Q Consensus 466 i~TGd~~~~a~~~a~~lgi~~~~~~~~~g~~~~~~~~~---~~~~~~~v~~~~~p~~K~~~v~~l~~~~g~~v~~iGDg~ 542 (563)
|+|||++.+|.++|+++||. ...+++|.+++.++++ ....+..+|+|++|+||.++|+.||++ |+.|+|+|||.
T Consensus 571 miTGD~~~tA~~IA~~lGI~--~~~v~~G~el~~l~~~el~~~~~~~~VfAr~sPe~K~~IV~~Lq~~-G~vVam~GDGv 647 (902)
T PRK10517 571 ILTGDSELVAAKVCHEVGLD--AGEVLIGSDIETLSDDELANLAERTTLFARLTPMHKERIVTLLKRE-GHVVGFMGDGI 647 (902)
T ss_pred EEcCCCHHHHHHHHHHcCCC--ccCceeHHHHHhCCHHHHHHHHhhCcEEEEcCHHHHHHHHHHHHHC-CCEEEEECCCc
Confidence 99999999999999999995 3578999999988766 556777899999999999999999998 99999999999
Q ss_pred cCHHHHhhCCceEeecCCCCC
Q 044020 543 NDASALHEADIGLAMGIAGTE 563 (563)
Q Consensus 543 ND~~~l~~a~vgiamg~~~~~ 563 (563)
||+|||++|||||||| +|+|
T Consensus 648 NDaPALk~ADVGIAmg-~gtd 667 (902)
T PRK10517 648 NDAPALRAADIGISVD-GAVD 667 (902)
T ss_pred chHHHHHhCCEEEEeC-CcCH
Confidence 9999999999999999 8875
|
|
| >TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-87 Score=747.97 Aligned_cols=525 Identities=34% Similarity=0.522 Sum_probs=439.2
Q ss_pred chhhHHHHHHHHHHHHHHHhccCeeEEEECCEEEEeecCCcccCcEEEeCCCCeeeceEEEEeeCceEEEeccCcCCCCc
Q 044020 2 VTAISDYKQSLQFRDLDREKKKIFIQVTRDGQRQKVCTYDLVVGDIVHLSIGDQVPAYGIFISGHSLLIDESSLSGQSEP 81 (563)
Q Consensus 2 ~~~~~~~~~~~~~~~l~~~~~~~~~~V~r~g~~~~i~~~~L~~GDiI~v~~G~~iPaD~~ll~g~~l~Vdes~lTGes~p 81 (563)
++.+.+|+.++..+++.+. .+.+++|+|||+++.|+++||+|||||.|++||+|||||+|++|+.+.||||+|||||.|
T Consensus 96 i~~~qe~~a~~~l~~L~~l-~~~~~~ViRdg~~~~I~~~eLv~GDiv~l~~Gd~IPaDg~ii~g~~l~VDES~LTGES~p 174 (884)
T TIGR01522 96 VGFVQEYRSEKSLEALNKL-VPPECHLIREGKLEHVLASTLVPGDLVCLSVGDRVPADLRIVEAVDLSIDESNLTGETTP 174 (884)
T ss_pred HHHHHHHHHHHHHHHHhcc-CCCeeEEEECCEEEEEEHHHCccCCEEEecCCCEEeeeEEEEEcCceEEEcccccCCCcc
Confidence 3455666666666666553 466899999999999999999999999999999999999999998789999999999999
Q ss_pred ccccCCC-------------CeEEecceeecCcEEEEEEEEcccchhHHHHHHhccCCCCCCchHHHHHHHHHHHHHHHH
Q 044020 82 RYMYEEN-------------PFLLAGTKVQGGSGKMLVTTVGMRTEWGKLMETLNEGGEDETPLQVKLNGVATIIGKIEL 148 (563)
Q Consensus 82 ~~k~~~~-------------~~i~~Gt~v~~g~~~~~V~~tg~~t~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 148 (563)
+.|..++ +++|+||.+.+|.+.++|++||.+|.+|++.+.+..++.+++|+++.++++++++..+++
T Consensus 175 v~K~~~~~~~~~~~~~~~~~n~v~~GT~v~~G~~~~~V~~tG~~T~~gki~~~v~~~~~~kt~lq~~l~~l~~~~~~~~~ 254 (884)
T TIGR01522 175 VSKVTAPIPAATNGDLAERSNIAFMGTLVRCGHGKGIVVGTGSNTEFGAVFKMMQAIEKPKTPLQKSMDLLGKQLSLVSF 254 (884)
T ss_pred eecccccccccccccccccCceEEeCCEEEeeeEEEEEEEecCccHHHHHHHHhccCCCCCCcHHHHHHHHHHHHHHHHH
Confidence 9997542 589999999999999999999999999999999998888899999999999998877665
Q ss_pred HHHHHHHHHHHHHHhhccccccccccccchhhHHHHHHHHHHHHhhhhccCCchHHHHHHHHHHHHHHHhhCCCeeecch
Q 044020 149 FFSVLEFLVLIGRFLGEKVIHNEFTDWSSADALTLIDYFAVVVTIIDVAVPEGLPLAVTLSLAFAMKKLMNDGALVRHLS 228 (563)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ili~~~P~~l~~~~~~~~~~~~~~l~~~~i~~k~~~ 228 (563)
+++++++++.+ +.. ..+...+..++++++++|||+||++++++++.+.++|+++|+++|+++
T Consensus 255 ~~~~~~~~~~~---~~~---------------~~~~~~~~~~v~llv~aiP~~Lp~~vt~~l~~~~~r~ak~~ilvk~~~ 316 (884)
T TIGR01522 255 GVIGVICLVGW---FQG---------------KDWLEMFTISVSLAVAAIPEGLPIIVTVTLALGVLRMSKKRAIVRKLP 316 (884)
T ss_pred HHHHHHHHHHH---Hhc---------------CCHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHhhcCCcccchH
Confidence 44433333221 110 134567888899999999999999999999999999999999999999
Q ss_pred hhhhcCCeeeeecccccccccCceEEEEEEEcCeeeee-cCC---Cccc------cccccccHHHHHHHHHHHHhccCCc
Q 044020 229 ACETMGSASCICTDKTRMLTTNHMVVDKIWIANTISNV-EGN---NRKD------ILQSEISERVLDITLQAIFQNTGSK 298 (563)
Q Consensus 229 ~le~l~~v~~i~~DKTGTLT~~~~~v~~i~~~~~~~~~-~~~---~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (563)
++|.||++|++|||||||||+|+|.|.+++..+..+.. ... .... ...........+++..+.+|+ .+.
T Consensus 317 a~E~Lg~v~~Ic~DKTGTLT~n~m~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-~~~ 395 (884)
T TIGR01522 317 SVETLGSVNVICSDKTGTLTKNHMTVTKIWTSDGLHTMLNAVSLNQFGEVIVDGDVLHGFYTVAVSRILEAGNLCN-NAK 395 (884)
T ss_pred HHHhccCccEEEecCccccccCeEEEEEEEecCceEeeccCCccCCCCcccccccccccccCHHHHHHHHHHhhhC-CCe
Confidence 99999999999999999999999999999876543211 000 0000 000001122233443344443 333
Q ss_pred eeecCCCCceecCCccHHHHHHHHHHcCCChHHHhhhceEEEEecCCCCceeEEEEEEcC-CCeEEEEEeCChhHHHhcc
Q 044020 299 VVKDKDGKNSILGTPTESAILEFGLRLGGDFEAQRREFKIVKVEPFNSVRKKMSVLIALP-AGGMRAFCKGASEIVLSMC 377 (563)
Q Consensus 299 ~~~~~~~~~~~~~~~~e~al~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~sviv~~~-~~~~~~~~kG~~~~il~~c 377 (563)
.... ..+..|||+|.|+++++.+.+.+ ..+..++.++.+||++++|+|+++++.. ++++++++||+||.++.+|
T Consensus 396 ~~~~---~~~~~g~p~e~All~~~~~~~~~--~~~~~~~~~~~~pF~s~~k~m~v~~~~~~~~~~~~~~KGape~il~~c 470 (884)
T TIGR01522 396 FRNE---ADTLLGNPTDVALIELLMKFGLD--DLRETYIRVAEVPFSSERKWMAVKCVHRQDRSEMCFMKGAYEQVLKYC 470 (884)
T ss_pred ecCC---CCCcCCChHHHHHHHHHHHcCcH--hHHhhCcEEeEeCCCCCCCeEEEEEEEcCCCeEEEEEeCChHHHHHhh
Confidence 2211 12345899999999999887653 4445688999999999999999998764 4678999999999999999
Q ss_pred cccccCCCccccCCHHHHHHHHHHHHHHHHHHHhHhHhhhhccCCCCCCCCCCCCCceEEEEecccCCCCcchHHHHHHH
Q 044020 378 DKVVSDNGEPVPLSEEQFRNITDVINGFASEALRTLCLAFKDLNDSSNENNIPDSGYTLIAVVGIKDPVRPGVKEAVQTC 457 (563)
Q Consensus 378 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~G~r~i~~a~~~l~~~~~~~~~~~~~~~~lG~i~~~d~~~~~~~~~I~~l 457 (563)
+.++..+|...+++++.++++.+..+.++++|+|++++||+.+ +.+++|+|+++|+|++|++++++|++|
T Consensus 471 ~~~~~~~g~~~~l~~~~~~~i~~~~~~~a~~G~rvl~~A~~~~----------~~~l~~lGli~l~Dp~r~~~~~~i~~l 540 (884)
T TIGR01522 471 TYYQKKDGKTLTLTQQQRDVIQEEAAEMASAGLRVIAFASGPE----------KGQLTFLGLVGINDPPRPGVKEAVTTL 540 (884)
T ss_pred hhhhhcCCCeeeCCHHHHHHHHHHHHHHHhcCCEEEEEEEEcC----------CCCeEEEEEEeccCcchhHHHHHHHHH
Confidence 9888777888889999999999999999999999999999875 367899999999999999999999999
Q ss_pred HhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCceeechhhhcCCCC---CCCcceeEEEecChhhHHHHHHHHHHhcCCE
Q 044020 458 LEAGITVRMVTGDNINTARAIAKECGILTSDGEAVEGPEFRNMSPA---DIIPKLQVMARSLPSDKHTLVTQLRNTFGEV 534 (563)
Q Consensus 458 ~~~gi~v~i~TGd~~~~a~~~a~~lgi~~~~~~~~~g~~~~~~~~~---~~~~~~~v~~~~~p~~K~~~v~~l~~~~g~~ 534 (563)
+++|++++|+|||++.+|.++|+++|+......+++|.+++.+.++ +...+..+|+|++|++|..+++.+|+. |+.
T Consensus 541 ~~~Gi~v~miTGD~~~tA~~ia~~~Gi~~~~~~~v~g~~l~~~~~~~l~~~~~~~~Vfar~~P~~K~~iv~~lq~~-g~~ 619 (884)
T TIGR01522 541 ITGGVRIIMITGDSQETAVSIARRLGMPSKTSQSVSGEKLDAMDDQQLSQIVPKVAVFARASPEHKMKIVKALQKR-GDV 619 (884)
T ss_pred HHCCCeEEEECCCCHHHHHHHHHHcCCCCCCCceeEhHHhHhCCHHHHHHHhhcCeEEEECCHHHHHHHHHHHHHC-CCE
Confidence 9999999999999999999999999998877788999999887765 567788899999999999999999998 999
Q ss_pred EEEEcCCccCHHHHhhCCceEeecCCCC
Q 044020 535 VAVTGDGTNDASALHEADIGLAMGIAGT 562 (563)
Q Consensus 535 v~~iGDg~ND~~~l~~a~vgiamg~~~~ 562 (563)
|+|+|||.||+|||++||||||||.+|+
T Consensus 620 v~mvGDGvND~pAl~~AdVGia~g~~g~ 647 (884)
T TIGR01522 620 VAMTGDGVNDAPALKLADIGVAMGQTGT 647 (884)
T ss_pred EEEECCCcccHHHHHhCCeeEecCCCcC
Confidence 9999999999999999999999995555
|
The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116. |
| >TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-87 Score=742.58 Aligned_cols=505 Identities=26% Similarity=0.385 Sum_probs=427.6
Q ss_pred hhHHHHHHHHHHHHHHHhccCeeEEEE------CCEEEEeecCCcccCcEEEeCCCCeeeceEEEEeeCceEEEeccCcC
Q 044020 4 AISDYKQSLQFRDLDREKKKIFIQVTR------DGQRQKVCTYDLVVGDIVHLSIGDQVPAYGIFISGHSLLIDESSLSG 77 (563)
Q Consensus 4 ~~~~~~~~~~~~~l~~~~~~~~~~V~r------~g~~~~i~~~~L~~GDiI~v~~G~~iPaD~~ll~g~~l~Vdes~lTG 77 (563)
.+.+++.++...++.+. .+..++|+| ||++++|++++|+|||+|.|++||+|||||+|++|+++.||||+|||
T Consensus 106 ~~~e~~a~ka~~~L~~l-~~~~~~V~R~~~~~~dg~~~~I~~~eLv~GDiV~l~~Gd~VPaDg~li~g~~l~VDES~LTG 184 (867)
T TIGR01524 106 FIQESRAERAAYALKNM-VKNTATVLRVINENGNGSMDEVPIDALVPGDLIELAAGDIIPADARVISARDLFINQSALTG 184 (867)
T ss_pred HHHHHHHHHHHHHHhhh-ccCeeEEEEecccCCCCeEEEEEhhcCCCCCEEEECCCCEEcccEEEEecCceEEEcccccC
Confidence 34455555555555554 456799999 99999999999999999999999999999999999888999999999
Q ss_pred CCCcccccCCC------------CeEEecceeecCcEEEEEEEEcccchhHHHHHHhccCCCCCCchHHHHHHHHHHHHH
Q 044020 78 QSEPRYMYEEN------------PFLLAGTKVQGGSGKMLVTTVGMRTEWGKLMETLNEGGEDETPLQVKLNGVATIIGK 145 (563)
Q Consensus 78 es~p~~k~~~~------------~~i~~Gt~v~~g~~~~~V~~tg~~t~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (563)
||.|+.|..++ +++|+||.+.+|.++++|++||.+|++|++.+.+.+ ..+++|+++.++++++++..
T Consensus 185 ES~PV~K~~~~~~~~~~~~~~~~n~vfaGT~v~~G~~~~~V~~tG~~T~~gki~~~v~~-~~~~t~lq~~~~~i~~~~~~ 263 (867)
T TIGR01524 185 ESLPVEKFVEDKRARDPEILERENLCFMGTNVLSGHAQAVVLATGSSTWFGSLAIAATE-RRGQTAFDKGVKSVSKLLIR 263 (867)
T ss_pred CCCcccccCCccccccccccccccceecCCeEEEeEEEEEEEEEcCccHHHHHHHHhhC-CCCCCcHHHHHHHHHHHHHH
Confidence 99999997653 579999999999999999999999999999999988 67789999999999999988
Q ss_pred HHHHHHHHHHHHHHHHHhhccccccccccccchhhHHHHHHHHHHHHhhhhccCCchHHHHHHHHHHHHHHHhhCCCeee
Q 044020 146 IELFFSVLEFLVLIGRFLGEKVIHNEFTDWSSADALTLIDYFAVVVTIIDVAVPEGLPLAVTLSLAFAMKKLMNDGALVR 225 (563)
Q Consensus 146 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ili~~~P~~l~~~~~~~~~~~~~~l~~~~i~~k 225 (563)
+++++++++++++.+ .. ..+...+.+++++++++|||+||++++++++.+.++|+++|+++|
T Consensus 264 ~~~~~~~i~~~~~~~--~~----------------~~~~~~~~~al~l~v~~iP~~Lp~~vt~~la~g~~~mak~~ilvk 325 (867)
T TIGR01524 264 FMLVMVPVVLMINGL--MK----------------GDWLEAFLFALAVAVGLTPEMLPMIVSSNLAKGAINMSKKKVIVK 325 (867)
T ss_pred HHHHHHHHheehHHH--hc----------------CCHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHhCCcEEc
Confidence 877777666554321 10 124567888899999999999999999999999999999999999
Q ss_pred cchhhhhcCCeeeeecccccccccCceEEEEEEEcCeeeeecCCCccccccccccHHHHHHHHHHHHhccCCceeecCCC
Q 044020 226 HLSACETMGSASCICTDKTRMLTTNHMVVDKIWIANTISNVEGNNRKDILQSEISERVLDITLQAIFQNTGSKVVKDKDG 305 (563)
Q Consensus 226 ~~~~le~l~~v~~i~~DKTGTLT~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (563)
+++++|.||++|++|||||||||+|+|.|.+++..... ..++. +..+.+ +....
T Consensus 326 ~l~aiE~lg~v~vic~DKTGTLT~~~m~v~~~~~~~~~---------------~~~~~---l~~a~l-~~~~~------- 379 (867)
T TIGR01524 326 ELSAIQNFGAMDILCTDKTGTLTQDKIELEKHIDSSGE---------------TSERV---LKMAWL-NSYFQ------- 379 (867)
T ss_pred cchhhhhccCccEEEecCCCccccCeEEEEEEecCCCC---------------CHHHH---HHHHHH-hCCCC-------
Confidence 99999999999999999999999999999987522110 01122 222222 22111
Q ss_pred CceecCCccHHHHHHHHHHcCCChHHHhhhceEEEEecCCCCceeEEEEEEcCCCeEEEEEeCChhHHHhcccccccCCC
Q 044020 306 KNSILGTPTESAILEFGLRLGGDFEAQRREFKIVKVEPFNSVRKKMSVLIALPAGGMRAFCKGASEIVLSMCDKVVSDNG 385 (563)
Q Consensus 306 ~~~~~~~~~e~al~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~sviv~~~~~~~~~~~kG~~~~il~~c~~~~~~~~ 385 (563)
..++||+|.|+++++.... ....+..++.++.+||++++|+|+++++.+++.+++++||+|+.++++|+.+.. +|
T Consensus 380 --~~~~~p~~~Al~~~~~~~~--~~~~~~~~~~~~~~pF~s~~k~ms~~v~~~~~~~~~~~KGa~e~il~~c~~~~~-~~ 454 (867)
T TIGR01524 380 --TGWKNVLDHAVLAKLDESA--ARQTASRWKKVDEIPFDFDRRRLSVVVENRAEVTRLICKGAVEEMLTVCTHKRF-GG 454 (867)
T ss_pred --CCCCChHHHHHHHHHHhhc--hhhHhhcCceEEEeccCCCcCEEEEEEEcCCceEEEEEeCcHHHHHHhchhhhc-CC
Confidence 1246999999999987542 233445688899999999999999999876667889999999999999987644 56
Q ss_pred ccccCCHHHHHHHHHHHHHHHHHHHhHhHhhhhccCCCCCCC-CCCCCCceEEEEecccCCCCcchHHHHHHHHhCCCeE
Q 044020 386 EPVPLSEEQFRNITDVINGFASEALRTLCLAFKDLNDSSNEN-NIPDSGYTLIAVVGIKDPVRPGVKEAVQTCLEAGITV 464 (563)
Q Consensus 386 ~~~~~~~~~~~~i~~~~~~~~~~G~r~i~~a~~~l~~~~~~~-~~~~~~~~~lG~i~~~d~~~~~~~~~I~~l~~~gi~v 464 (563)
...+++++.++++.+.++.++++|+|++++|||+++..+... ...+.+++|+|+++|+|++|++++++|++|+++||++
T Consensus 455 ~~~~l~~~~~~~i~~~~~~~a~~G~rvlavA~~~~~~~~~~~~~~~e~~l~~lGli~l~Dp~R~~~~~aI~~l~~aGI~v 534 (867)
T TIGR01524 455 AVVTLSESEKSELQDMTAEMNRQGIRVIAVATKTLKVGEADFTKTDEEQLIIEGFLGFLDPPKESTKEAIAALFKNGINV 534 (867)
T ss_pred ceecCCHHHHHHHHHHHHHHHhcCCEEEEEEEeccCcccccccccccCCcEEEEEEEeeCCCchhHHHHHHHHHHCCCEE
Confidence 778899999999999999999999999999999887643221 1247889999999999999999999999999999999
Q ss_pred EEEcCCCHHHHHHHHHHcCCCCCCCceeechhhhcCCCC---CCCcceeEEEecChhhHHHHHHHHHHhcCCEEEEEcCC
Q 044020 465 RMVTGDNINTARAIAKECGILTSDGEAVEGPEFRNMSPA---DIIPKLQVMARSLPSDKHTLVTQLRNTFGEVVAVTGDG 541 (563)
Q Consensus 465 ~i~TGd~~~~a~~~a~~lgi~~~~~~~~~g~~~~~~~~~---~~~~~~~v~~~~~p~~K~~~v~~l~~~~g~~v~~iGDg 541 (563)
+|+|||++.+|.++|+++||.. ..++.|.+++.+..+ +...+..+|+|++|+||.++|+.+|++ |+.|+|+|||
T Consensus 535 vmiTGD~~~tA~aIA~~lGI~~--~~v~~g~~l~~~~~~el~~~~~~~~vfAr~~Pe~K~~iV~~lq~~-G~vVam~GDG 611 (867)
T TIGR01524 535 KVLTGDNEIVTARICQEVGIDA--NDFLLGADIEELSDEELARELRKYHIFARLTPMQKSRIIGLLKKA-GHTVGFLGDG 611 (867)
T ss_pred EEEcCCCHHHHHHHHHHcCCCC--CCeeecHhhhhCCHHHHHHHhhhCeEEEECCHHHHHHHHHHHHhC-CCEEEEECCC
Confidence 9999999999999999999964 468899999887665 566778899999999999999999998 9999999999
Q ss_pred ccCHHHHhhCCceEeecCCCCC
Q 044020 542 TNDASALHEADIGLAMGIAGTE 563 (563)
Q Consensus 542 ~ND~~~l~~a~vgiamg~~~~~ 563 (563)
.||+|||++|||||||| +|+|
T Consensus 612 vNDapALk~AdVGIAmg-~gtd 632 (867)
T TIGR01524 612 INDAPALRKADVGISVD-TAAD 632 (867)
T ss_pred cccHHHHHhCCEEEEeC-CccH
Confidence 99999999999999999 8874
|
The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis. |
| >PRK15122 magnesium-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-87 Score=744.17 Aligned_cols=505 Identities=25% Similarity=0.397 Sum_probs=426.3
Q ss_pred hhHHHHHHHHHHHHHHHhccCeeEEEEC------CEEEEeecCCcccCcEEEeCCCCeeeceEEEEeeCceEEEeccCcC
Q 044020 4 AISDYKQSLQFRDLDREKKKIFIQVTRD------GQRQKVCTYDLVVGDIVHLSIGDQVPAYGIFISGHSLLIDESSLSG 77 (563)
Q Consensus 4 ~~~~~~~~~~~~~l~~~~~~~~~~V~r~------g~~~~i~~~~L~~GDiI~v~~G~~iPaD~~ll~g~~l~Vdes~lTG 77 (563)
.+.+++.++...++.+. .+..++|+|| |+++.|++++|+|||+|.|++||+|||||+|++|+++.||||+|||
T Consensus 129 ~~qe~~a~~a~~~L~~l-~~~~~~V~Rdg~~~~~g~~~~I~~~eLv~GDiV~l~~Gd~IPaDg~li~g~~l~VDES~LTG 207 (903)
T PRK15122 129 FWQEFRSNKAAEALKAM-VRTTATVLRRGHAGAEPVRREIPMRELVPGDIVHLSAGDMIPADVRLIESRDLFISQAVLTG 207 (903)
T ss_pred HHHHHHHHHHHHHHHhc-cCCceEEEECCccCCCCeEEEEEHHHCCCCCEEEECCCCEEeeeEEEEEcCceEEEccccCC
Confidence 34455555555555544 3567999999 4899999999999999999999999999999999888999999999
Q ss_pred CCCcccccC----------------------CCCeEEecceeecCcEEEEEEEEcccchhHHHHHHhccCCCCCCchHHH
Q 044020 78 QSEPRYMYE----------------------ENPFLLAGTKVQGGSGKMLVTTVGMRTEWGKLMETLNEGGEDETPLQVK 135 (563)
Q Consensus 78 es~p~~k~~----------------------~~~~i~~Gt~v~~g~~~~~V~~tg~~t~~~~i~~~~~~~~~~~~~~~~~ 135 (563)
||.|+.|.. .++++|+||.|.+|++.++|++||.+|++|++.+.+.. ...++|+++.
T Consensus 208 ES~PV~K~~~~~~~~~~~~~~~~~~~~~~~~~~n~vfaGT~V~~G~~~~~V~atG~~T~~gkI~~~v~~-~~~~t~l~~~ 286 (903)
T PRK15122 208 EALPVEKYDTLGAVAGKSADALADDEGSLLDLPNICFMGTNVVSGTATAVVVATGSRTYFGSLAKSIVG-TRAQTAFDRG 286 (903)
T ss_pred CCcceeeeccccccccccccccccccCCcccccceEEeCCEEEeeeEEEEEEEeccccHhhHHHHHhcC-CCCCCcHHHH
Confidence 999999963 12689999999999999999999999999999999877 6668899999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccchhhHHHHHHHHHHHHhhhhccCCchHHHHHHHHHHHHH
Q 044020 136 LNGVATIIGKIELFFSVLEFLVLIGRFLGEKVIHNEFTDWSSADALTLIDYFAVVVTIIDVAVPEGLPLAVTLSLAFAMK 215 (563)
Q Consensus 136 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ili~~~P~~l~~~~~~~~~~~~~ 215 (563)
++++.+++..++++++.+++++..+ .. .++...+.+++++++++|||+||++++++++.+..
T Consensus 287 l~~i~~~l~~~~~~~~~~v~~~~~~--~~----------------~~~~~~l~~aisl~V~~~Pe~Lp~~vt~~La~g~~ 348 (903)
T PRK15122 287 VNSVSWLLIRFMLVMVPVVLLINGF--TK----------------GDWLEALLFALAVAVGLTPEMLPMIVSSNLAKGAI 348 (903)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhhhh--cc----------------CCHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHH
Confidence 9999998887766655544433211 10 13456788899999999999999999999999999
Q ss_pred HHhhCCCeeecchhhhhcCCeeeeecccccccccCceEEEEEEEcCeeeeecCCCccccccccccHHHHHHHHHHHHhcc
Q 044020 216 KLMNDGALVRHLSACETMGSASCICTDKTRMLTTNHMVVDKIWIANTISNVEGNNRKDILQSEISERVLDITLQAIFQNT 295 (563)
Q Consensus 216 ~l~~~~i~~k~~~~le~l~~v~~i~~DKTGTLT~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (563)
+|+++|+++|+++++|+||++|++|||||||||+|+|.|.+++..+.. ..++.+.. +.+ +.
T Consensus 349 ~mak~~ilVk~l~avE~Lg~v~vIc~DKTGTLT~~~m~V~~~~~~~~~---------------~~~~~l~~---a~l-~s 409 (903)
T PRK15122 349 AMARRKVVVKRLNAIQNFGAMDVLCTDKTGTLTQDRIILEHHLDVSGR---------------KDERVLQL---AWL-NS 409 (903)
T ss_pred HHHHcCCeecccchhhhhcCCcEEEecCCcccccCeEEEEEEEcCCCC---------------ChHHHHHH---HHH-hC
Confidence 999999999999999999999999999999999999999997643221 01222222 222 21
Q ss_pred CCceeecCCCCceecCCccHHHHHHHHHHcCCChHHHhhhceEEEEecCCCCceeEEEEEEcCCCeEEEEEeCChhHHHh
Q 044020 296 GSKVVKDKDGKNSILGTPTESAILEFGLRLGGDFEAQRREFKIVKVEPFNSVRKKMSVLIALPAGGMRAFCKGASEIVLS 375 (563)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~e~al~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~sviv~~~~~~~~~~~kG~~~~il~ 375 (563)
.. ....+||+|.|+++++.+.+.. .....++.+..+||++.+++|+++++..++++++++||+|+.+++
T Consensus 410 ~~---------~~~~~~p~e~All~~a~~~~~~--~~~~~~~~~~~~pF~s~~k~ms~v~~~~~~~~~~~~KGa~e~il~ 478 (903)
T PRK15122 410 FH---------QSGMKNLMDQAVVAFAEGNPEI--VKPAGYRKVDELPFDFVRRRLSVVVEDAQGQHLLICKGAVEEMLA 478 (903)
T ss_pred CC---------CCCCCChHHHHHHHHHHHcCch--hhhhcCceEEEeeeCCCcCEEEEEEEcCCCcEEEEECCcHHHHHH
Confidence 10 0125799999999999876643 233467889999999999999999987677889999999999999
Q ss_pred cccccccCCCccccCCHHHHHHHHHHHHHHHHHHHhHhHhhhhccCCCCCC---CCCCCCCceEEEEecccCCCCcchHH
Q 044020 376 MCDKVVSDNGEPVPLSEEQFRNITDVINGFASEALRTLCLAFKDLNDSSNE---NNIPDSGYTLIAVVGIKDPVRPGVKE 452 (563)
Q Consensus 376 ~c~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~G~r~i~~a~~~l~~~~~~---~~~~~~~~~~lG~i~~~d~~~~~~~~ 452 (563)
+|+++.. +|...+++++.++++.+..+.++++|+|++++|||+++..+.. ....|.|++|+|+++|+|++|+++++
T Consensus 479 ~c~~~~~-~~~~~~l~~~~~~~i~~~~~~~a~~G~rvlavA~k~~~~~~~~~~~~~~~e~~l~~lGli~l~Dp~R~~a~~ 557 (903)
T PRK15122 479 VATHVRD-GDTVRPLDEARRERLLALAEAYNADGFRVLLVATREIPGGESRAQYSTADERDLVIRGFLTFLDPPKESAAP 557 (903)
T ss_pred hchhhhc-CCCeecCCHHHHHHHHHHHHHHHhCCCEEEEEEEeccCccccccccccccccCcEEEEEEeccCccHHHHHH
Confidence 9997654 5677889999999999999999999999999999988654321 12357889999999999999999999
Q ss_pred HHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCceeechhhhcCCCC---CCCcceeEEEecChhhHHHHHHHHHH
Q 044020 453 AVQTCLEAGITVRMVTGDNINTARAIAKECGILTSDGEAVEGPEFRNMSPA---DIIPKLQVMARSLPSDKHTLVTQLRN 529 (563)
Q Consensus 453 ~I~~l~~~gi~v~i~TGd~~~~a~~~a~~lgi~~~~~~~~~g~~~~~~~~~---~~~~~~~v~~~~~p~~K~~~v~~l~~ 529 (563)
+|++|+++||+|+|+|||++.+|.++|+++||.. ..+++|.+++.++++ ....+..+|+|++|+||.++|+.||+
T Consensus 558 aI~~l~~aGI~v~miTGD~~~tA~aIA~~lGI~~--~~vi~G~el~~~~~~el~~~v~~~~VfAr~sPe~K~~iV~~Lq~ 635 (903)
T PRK15122 558 AIAALRENGVAVKVLTGDNPIVTAKICREVGLEP--GEPLLGTEIEAMDDAALAREVEERTVFAKLTPLQKSRVLKALQA 635 (903)
T ss_pred HHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCC--CCccchHhhhhCCHHHHHHHhhhCCEEEEeCHHHHHHHHHHHHh
Confidence 9999999999999999999999999999999963 468999999988776 55677789999999999999999999
Q ss_pred hcCCEEEEEcCCccCHHHHhhCCceEeecCCCCC
Q 044020 530 TFGEVVAVTGDGTNDASALHEADIGLAMGIAGTE 563 (563)
Q Consensus 530 ~~g~~v~~iGDg~ND~~~l~~a~vgiamg~~~~~ 563 (563)
+ |+.|+|+|||.||+|||++|||||||| +|+|
T Consensus 636 ~-G~vVamtGDGvNDaPALk~ADVGIAmg-~gtd 667 (903)
T PRK15122 636 N-GHTVGFLGDGINDAPALRDADVGISVD-SGAD 667 (903)
T ss_pred C-CCEEEEECCCchhHHHHHhCCEEEEeC-cccH
Confidence 8 999999999999999999999999999 8875
|
|
| >TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-85 Score=722.59 Aligned_cols=482 Identities=26% Similarity=0.422 Sum_probs=404.0
Q ss_pred hhHHHHHHHHHHHHHHHhccCeeEEEECCEEEEeecCCcccCcEEEeCCCCeeeceEEEEeeCceEEEeccCcCCCCccc
Q 044020 4 AISDYKQSLQFRDLDREKKKIFIQVTRDGQRQKVCTYDLVVGDIVHLSIGDQVPAYGIFISGHSLLIDESSLSGQSEPRY 83 (563)
Q Consensus 4 ~~~~~~~~~~~~~l~~~~~~~~~~V~r~g~~~~i~~~~L~~GDiI~v~~G~~iPaD~~ll~g~~l~Vdes~lTGes~p~~ 83 (563)
.+.+++.++..+++.+ ..+.+++|+|||++++|++++|+|||+|.|++||+|||||+|++|+.+.||||+|||||.|+.
T Consensus 73 ~~qe~~a~~~~~~L~~-~~~~~~~V~Rdg~~~~I~~~~Lv~GDiV~l~~Gd~IPaDg~vi~g~~~~VDeS~LTGES~PV~ 151 (755)
T TIGR01647 73 FIEENKAGNAVEALKQ-SLAPKARVLRDGKWQEIPASELVPGDVVRLKIGDIVPADCRLFEGDYIQVDQAALTGESLPVT 151 (755)
T ss_pred HHHHHHHHHHHHHHHh-hCCCeEEEEECCEEEEEEhhhCcCCCEEEECCCCEEeceEEEEecCceEEEcccccCCccceE
Confidence 3444444444455543 346789999999999999999999999999999999999999999867999999999999999
Q ss_pred ccCCCCeEEecceeecCcEEEEEEEEcccchhHHHHHHhccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 044020 84 MYEENPFLLAGTKVQGGSGKMLVTTVGMRTEWGKLMETLNEGGEDETPLQVKLNGVATIIGKIELFFSVLEFLVLIGRFL 163 (563)
Q Consensus 84 k~~~~~~i~~Gt~v~~g~~~~~V~~tg~~t~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 163 (563)
|..++ .+|+||.+.+|++.++|++||.+|++|++.+.+.+++.+++|+++.+++++.++.++++++++++++++++..
T Consensus 152 K~~~~-~v~aGT~v~~G~~~~~V~~tG~~T~~g~i~~lv~~~~~~~~~lq~~~~~i~~~~~~~~~~~~~i~~~~~~~~~- 229 (755)
T TIGR01647 152 KKTGD-IAYSGSTVKQGEAEAVVTATGMNTFFGKAAALVQSTETGSGHLQKILSKIGLFLIVLIGVLVLIELVVLFFGR- 229 (755)
T ss_pred eccCC-eeeccCEEEccEEEEEEEEcCCccHHHHHHHHhhccCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-
Confidence 98654 5999999999999999999999999999999999888888999999999999998887777766665543211
Q ss_pred hccccccccccccchhhHHHHHHHHHHHHhhhhccCCchHHHHHHHHHHHHHHHhhCCCeeecchhhhhcCCeeeeeccc
Q 044020 164 GEKVIHNEFTDWSSADALTLIDYFAVVVTIIDVAVPEGLPLAVTLSLAFAMKKLMNDGALVRHLSACETMGSASCICTDK 243 (563)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ili~~~P~~l~~~~~~~~~~~~~~l~~~~i~~k~~~~le~l~~v~~i~~DK 243 (563)
. .++...+.+++++++++|||+||++++++++.+.++|+|+|+++|+++++|.||.+|++||||
T Consensus 230 ~----------------~~~~~~~~~~i~vlv~a~P~~Lp~~~~~~la~g~~r~ak~gilvk~l~alE~lg~v~~i~~DK 293 (755)
T TIGR01647 230 G----------------ESFREGLQFALVLLVGGIPIAMPAVLSVTMAVGAAELAKKKAIVTRLTAIEELAGMDILCSDK 293 (755)
T ss_pred C----------------CCHHHHHHHHHHHHHHhCCcchHHHHHHHHHHHHHHHHhCCeEEcccHHHHhccCCcEEEecC
Confidence 0 134667888999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccCceEEEEEEEcCeeeeecCCCccccccccccHHHHHHHHHHHHhccCCceeecCCCCceecCCccHHHHHHHHH
Q 044020 244 TRMLTTNHMVVDKIWIANTISNVEGNNRKDILQSEISERVLDITLQAIFQNTGSKVVKDKDGKNSILGTPTESAILEFGL 323 (563)
Q Consensus 244 TGTLT~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~al~~~~~ 323 (563)
|||||+|+|.|.+++..+..+ ..++ .+..+.+++. ...+||+|.|+++++.
T Consensus 294 TGTLT~~~~~v~~~~~~~~~~--------------~~~~---~l~~a~~~~~------------~~~~~pi~~Ai~~~~~ 344 (755)
T TIGR01647 294 TGTLTLNKLSIDEILPFFNGF--------------DKDD---VLLYAALASR------------EEDQDAIDTAVLGSAK 344 (755)
T ss_pred CCccccCceEEEEEEecCCCC--------------CHHH---HHHHHHHhCC------------CCCCChHHHHHHHHHH
Confidence 999999999999988653210 0112 2222333321 1236999999999886
Q ss_pred HcCCChHHHhhhceEEEEecCCCCceeEEEEEEcCC-CeEEEEEeCChhHHHhcccccccCCCccccCCHHHHHHHHHHH
Q 044020 324 RLGGDFEAQRREFKIVKVEPFNSVRKKMSVLIALPA-GGMRAFCKGASEIVLSMCDKVVSDNGEPVPLSEEQFRNITDVI 402 (563)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~f~~~~~~~sviv~~~~-~~~~~~~kG~~~~il~~c~~~~~~~~~~~~~~~~~~~~i~~~~ 402 (563)
+.+ ..+..++.++.+||++.+|+|+++++.++ ++++.++||+|+.+++.|+.. ++.++++.+.+
T Consensus 345 ~~~----~~~~~~~~~~~~pf~~~~k~~~~~v~~~~~g~~~~~~kGa~e~il~~c~~~-----------~~~~~~~~~~~ 409 (755)
T TIGR01647 345 DLK----EARDGYKVLEFVPFDPVDKRTEATVEDPETGKRFKVTKGAPQVILDLCDNK-----------KEIEEKVEEKV 409 (755)
T ss_pred HhH----HHHhcCceEEEeccCCCCCeEEEEEEeCCCceEEEEEeCChHHHHHhcCCc-----------HHHHHHHHHHH
Confidence 532 23446788999999999999999988754 667788999999999999731 34456778888
Q ss_pred HHHHHHHHhHhHhhhhccCCCCCCCCCCCCCceEEEEecccCCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHc
Q 044020 403 NGFASEALRTLCLAFKDLNDSSNENNIPDSGYTLIAVVGIKDPVRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAKEC 482 (563)
Q Consensus 403 ~~~~~~G~r~i~~a~~~l~~~~~~~~~~~~~~~~lG~i~~~d~~~~~~~~~I~~l~~~gi~v~i~TGd~~~~a~~~a~~l 482 (563)
++++.+|+|++++|+++ .+.+++|+|+++|+|++||+++++|++|+++|++++|+|||++.+|.++|+++
T Consensus 410 ~~~~~~G~rvl~vA~~~----------~e~~l~~~Gli~l~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~l 479 (755)
T TIGR01647 410 DELASRGYRALGVARTD----------EEGRWHFLGLLPLFDPPRHDTKETIERARHLGVEVKMVTGDHLAIAKETARRL 479 (755)
T ss_pred HHHHhCCCEEEEEEEEc----------CCCCcEEEEEeeccCCChhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHc
Confidence 99999999999999973 25789999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCceeechhh------hcCCCC---CCCcceeEEEecChhhHHHHHHHHHHhcCCEEEEEcCCccCHHHHhhCCc
Q 044020 483 GILTSDGEAVEGPEF------RNMSPA---DIIPKLQVMARSLPSDKHTLVTQLRNTFGEVVAVTGDGTNDASALHEADI 553 (563)
Q Consensus 483 gi~~~~~~~~~g~~~------~~~~~~---~~~~~~~v~~~~~p~~K~~~v~~l~~~~g~~v~~iGDg~ND~~~l~~a~v 553 (563)
||... +++++++ +.++.+ +...+..+|+|++|+||.++|+.+|++ |+.|+|+|||.||+|||++|||
T Consensus 480 GI~~~---~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfAr~~Pe~K~~iV~~lq~~-G~~VamvGDGvNDapAL~~AdV 555 (755)
T TIGR01647 480 GLGTN---IYTADVLLKGDNRDDLPSGELGEMVEDADGFAEVFPEHKYEIVEILQKR-GHLVGMTGDGVNDAPALKKADV 555 (755)
T ss_pred CCCCC---CcCHHHhcCCcchhhCCHHHHHHHHHhCCEEEecCHHHHHHHHHHHHhc-CCEEEEEcCCcccHHHHHhCCe
Confidence 99752 3334333 233322 345566799999999999999999998 9999999999999999999999
Q ss_pred eEeecCCCCC
Q 044020 554 GLAMGIAGTE 563 (563)
Q Consensus 554 giamg~~~~~ 563 (563)
||||| +|+|
T Consensus 556 GIAm~-~gtd 564 (755)
T TIGR01647 556 GIAVA-GATD 564 (755)
T ss_pred eEEec-CCcH
Confidence 99999 8864
|
This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast. |
| >TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V) | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-84 Score=735.73 Aligned_cols=510 Identities=25% Similarity=0.384 Sum_probs=402.9
Q ss_pred HHHHHHHHHHHHHHHh-ccCeeEEEECCEEEEeecCCcccCcEEEeC--CCCeeeceEEEEeeCceEEEeccCcCCCCcc
Q 044020 6 SDYKQSLQFRDLDREK-KKIFIQVTRDGQRQKVCTYDLVVGDIVHLS--IGDQVPAYGIFISGHSLLIDESSLSGQSEPR 82 (563)
Q Consensus 6 ~~~~~~~~~~~l~~~~-~~~~~~V~r~g~~~~i~~~~L~~GDiI~v~--~G~~iPaD~~ll~g~~l~Vdes~lTGes~p~ 82 (563)
.-|++.++.+++.+.. ++..++|+|||+|++|+++||+|||||.|+ +|++|||||+|++|+ +.||||+|||||.|+
T Consensus 210 ~~~~~~k~~~~L~~~~~~~~~v~V~Rdg~~~~I~s~eLvpGDiv~l~~~~g~~iPaD~~ll~g~-~~VdES~LTGES~Pv 288 (1054)
T TIGR01657 210 SVYQIRKQMQRLRDMVHKPQSVIVIRNGKWVTIASDELVPGDIVSIPRPEEKTMPCDSVLLSGS-CIVNESMLTGESVPV 288 (1054)
T ss_pred HHHHHHHHHHHHHHhhcCCeeEEEEECCEEEEEEcccCCCCCEEEEecCCCCEecceEEEEeCc-EEEecccccCCccce
Confidence 3344444555565543 356899999999999999999999999999 999999999999996 699999999999999
Q ss_pred cccCC-----------------CCeEEecceeec-------CcEEEEEEEEcccchhHHHHHHhccCCCCCCchHHHHHH
Q 044020 83 YMYEE-----------------NPFLLAGTKVQG-------GSGKMLVTTVGMRTEWGKLMETLNEGGEDETPLQVKLNG 138 (563)
Q Consensus 83 ~k~~~-----------------~~~i~~Gt~v~~-------g~~~~~V~~tg~~t~~~~i~~~~~~~~~~~~~~~~~~~~ 138 (563)
.|... .+++|+||.+.+ |.+.++|++||.+|..|++.+.+...+..++++++...+
T Consensus 289 ~K~~~~~~~~~~~~~~~~~~~~~~~lf~GT~v~~~~~~~g~g~~~~vV~~TG~~T~~G~i~~~i~~~~~~~~~~~~~~~~ 368 (1054)
T TIGR01657 289 LKFPIPDNGDDDEDLFLYETSKKHVLFGGTKILQIRPYPGDTGCLAIVVRTGFSTSKGQLVRSILYPKPRVFKFYKDSFK 368 (1054)
T ss_pred ecccCCccccccccccccccccceEEEcCCEEEEEecCCCCCcEEEEEEeCCccccchHHHHHhhCCCCCCCchHHHHHH
Confidence 98641 347999999985 789999999999999999999998877778888887776
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccchhhHHHHHHHHHHHHhhhhccCCchHHHHHHHHHHHHHHHh
Q 044020 139 VATIIGKIELFFSVLEFLVLIGRFLGEKVIHNEFTDWSSADALTLIDYFAVVVTIIDVAVPEGLPLAVTLSLAFAMKKLM 218 (563)
Q Consensus 139 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ili~~~P~~l~~~~~~~~~~~~~~l~ 218 (563)
+..++..++ ++.+++++...+.. ...+...+..++.++++++|++||++++++++.+.++|+
T Consensus 369 ~~~~l~~~a----~i~~i~~~~~~~~~--------------~~~~~~~~l~~l~iiv~~vP~~LP~~~ti~l~~~~~rL~ 430 (1054)
T TIGR01657 369 FILFLAVLA----LIGFIYTIIELIKD--------------GRPLGKIILRSLDIITIVVPPALPAELSIGINNSLARLK 430 (1054)
T ss_pred HHHHHHHHH----HHHHHHHHHHHHHc--------------CCcHHHHHHHHHHHHHhhcCchHHHHHHHHHHHHHHHHH
Confidence 655543332 22222221111110 014566788889999999999999999999999999999
Q ss_pred hCCCeeecchhhhhcCCeeeeecccccccccCceEEEEEEEcCeeeeecCCCccccccccccHHHHHHHHHHHHhccCCc
Q 044020 219 NDGALVRHLSACETMGSASCICTDKTRMLTTNHMVVDKIWIANTISNVEGNNRKDILQSEISERVLDITLQAIFQNTGSK 298 (563)
Q Consensus 219 ~~~i~~k~~~~le~l~~v~~i~~DKTGTLT~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (563)
++|+++|+++++|.+|++|++|||||||||+|+|.|.+++..+........ ..+ ........+..++..||...
T Consensus 431 k~~il~~~~~~ie~lG~v~vicfDKTGTLTen~m~v~~v~~~~~~~~~~~~-~~~-----~~~~~~~~~~~~~a~C~~~~ 504 (1054)
T TIGR01657 431 KKGIFCTSPFRINFAGKIDVCCFDKTGTLTEDGLDLRGVQGLSGNQEFLKI-VTE-----DSSLKPSITHKALATCHSLT 504 (1054)
T ss_pred HCCEEEcCcccceecceeeEEEEcCCCCCccCCeeEEeEecccCccccccc-ccc-----ccccCchHHHHHHHhCCeeE
Confidence 999999999999999999999999999999999999999875432110000 000 00011223344556666654
Q ss_pred eeecCCCCceecCCccHHHHHHHHHHc-CC--C--hHH----------HhhhceEEEEecCCCCceeEEEEEEcCC-CeE
Q 044020 299 VVKDKDGKNSILGTPTESAILEFGLRL-GG--D--FEA----------QRREFKIVKVEPFNSVRKKMSVLIALPA-GGM 362 (563)
Q Consensus 299 ~~~~~~~~~~~~~~~~e~al~~~~~~~-~~--~--~~~----------~~~~~~~~~~~~f~~~~~~~sviv~~~~-~~~ 362 (563)
... + ...|||+|.|+++++... .. + ... ....+++++.+||+|++||||++++.++ +.+
T Consensus 505 ~~~---~--~~~Gdp~E~al~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~il~~~pF~S~~krMsvvv~~~~~~~~ 579 (1054)
T TIGR01657 505 KLE---G--KLVGDPLDKKMFEATGWTLEEDDESAEPTSILAVVRTDDPPQELSIIRRFQFSSALQRMSVIVSTNDERSP 579 (1054)
T ss_pred EEC---C--EEecCHHHHHHHHhCCCEEECCCCcccccccccceeccCCCceEEEEEEEeecCCCCEEEEEEEEcCCCeE
Confidence 322 1 577999999999986321 11 0 000 0246889999999999999999998755 567
Q ss_pred EEEEeCChhHHHhcccccccCCCccccCCHHHHHHHHHHHHHHHHHHHhHhHhhhhccCCCC------CCCCCCCCCceE
Q 044020 363 RAFCKGASEIVLSMCDKVVSDNGEPVPLSEEQFRNITDVINGFASEALRTLCLAFKDLNDSS------NENNIPDSGYTL 436 (563)
Q Consensus 363 ~~~~kG~~~~il~~c~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~G~r~i~~a~~~l~~~~------~~~~~~~~~~~~ 436 (563)
++++||+||.|+++|+.. ..++.+.+.++.++++|+||+++|||+++..+ ..++..|.|++|
T Consensus 580 ~~~~KGApE~Il~~c~~~------------~~p~~~~~~~~~~a~~G~RVLalA~k~l~~~~~~~~~~~~r~~~E~~L~f 647 (1054)
T TIGR01657 580 DAFVKGAPETIQSLCSPE------------TVPSDYQEVLKSYTREGYRVLALAYKELPKLTLQKAQDLSRDAVESNLTF 647 (1054)
T ss_pred EEEEECCHHHHHHHcCCc------------CCChhHHHHHHHHHhcCCEEEEEEEeecCccchhhhhhccHHHHhcCceE
Confidence 899999999999999731 12356778899999999999999999987432 123467899999
Q ss_pred EEEecccCCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCC---------------------------
Q 044020 437 IAVVGIKDPVRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAKECGILTSDG--------------------------- 489 (563)
Q Consensus 437 lG~i~~~d~~~~~~~~~I~~l~~~gi~v~i~TGd~~~~a~~~a~~lgi~~~~~--------------------------- 489 (563)
+|+++|+|++|++++++|++|+++||+++|+|||++.+|.++|+++||..++.
T Consensus 648 lGli~~~d~lr~~~~~~I~~l~~agi~v~miTGD~~~TA~~iA~~~gii~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~ 727 (1054)
T TIGR01657 648 LGFIVFENPLKPDTKEVIKELKRASIRTVMITGDNPLTAVHVARECGIVNPSNTLILAEAEPPESGKPNQIKFEVIDSIP 727 (1054)
T ss_pred EEEEEEecCCCccHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCceEEEeecccccCCCCceEEEEecCccc
Confidence 99999999999999999999999999999999999999999999999965432
Q ss_pred --------------------------ceeechhhhcCC---CC---CCCcceeEEEecChhhHHHHHHHHHHhcCCEEEE
Q 044020 490 --------------------------EAVEGPEFRNMS---PA---DIIPKLQVMARSLPSDKHTLVTQLRNTFGEVVAV 537 (563)
Q Consensus 490 --------------------------~~~~g~~~~~~~---~~---~~~~~~~v~~~~~p~~K~~~v~~l~~~~g~~v~~ 537 (563)
.+++|+.++.+. .+ ++..+..||||++|+||..+|+.||+. |+.|+|
T Consensus 728 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~itG~~l~~l~~~~~~~l~~~~~~~~VfAR~sP~qK~~iV~~lq~~-g~~V~m 806 (1054)
T TIGR01657 728 FASTQVEIPYPLGQDSVEDLLASRYHLAMSGKAFAVLQAHSPELLLRLLSHTTVFARMAPDQKETLVELLQKL-DYTVGM 806 (1054)
T ss_pred cccccccccCcccccchhhhcccceEEEEEcHHHHHHHHhhHHHHHHHHhcCeEEEecCHHHHHHHHHHHHhC-CCeEEE
Confidence 345555554321 11 455677899999999999999999998 999999
Q ss_pred EcCCccCHHHHhhCCceEeec
Q 044020 538 TGDGTNDASALHEADIGLAMG 558 (563)
Q Consensus 538 iGDg~ND~~~l~~a~vgiamg 558 (563)
+|||.||++||++||||||||
T Consensus 807 ~GDG~ND~~ALK~AdVGIam~ 827 (1054)
T TIGR01657 807 CGDGANDCGALKQADVGISLS 827 (1054)
T ss_pred EeCChHHHHHHHhcCcceeec
Confidence 999999999999999999999
|
These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in. |
| >PRK01122 potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-78 Score=644.98 Aligned_cols=451 Identities=25% Similarity=0.322 Sum_probs=368.4
Q ss_pred hhhHHHHHHHHHHHHHHHhccCeeEEEECCE-EEEeecCCcccCcEEEeCCCCeeeceEEEEeeCceEEEeccCcCCCCc
Q 044020 3 TAISDYKQSLQFRDLDREKKKIFIQVTRDGQ-RQKVCTYDLVVGDIVHLSIGDQVPAYGIFISGHSLLIDESSLSGQSEP 81 (563)
Q Consensus 3 ~~~~~~~~~~~~~~l~~~~~~~~~~V~r~g~-~~~i~~~~L~~GDiI~v~~G~~iPaD~~ll~g~~l~Vdes~lTGes~p 81 (563)
++..+++.+++..+|.+..++.+++|+|||. +++|++++|+|||+|.|++||+|||||+|++|.. .||||+|||||.|
T Consensus 83 e~~ae~ra~~~~~sL~~l~~~~~a~vir~g~~~~~V~~~eL~~GDiV~v~~Gd~IPaDG~vieG~a-~VDESaLTGES~P 161 (679)
T PRK01122 83 EALAEGRGKAQADSLRGAKKDTFARKLREPGAAEEVPATELRKGDIVLVEAGEIIPADGEVIEGVA-SVDESAITGESAP 161 (679)
T ss_pred HHHHHHHHHHHHHHHHhCCCCCeEEEEECCCEEEEEEHHHcCCCCEEEEcCCCEEEEEEEEEEccE-EEEcccccCCCCc
Confidence 3455666666666776655445799999988 8999999999999999999999999999999975 9999999999999
Q ss_pred ccccCCCC--eEEecceeecCcEEEEEEEEcccchhHHHHHHhccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 044020 82 RYMYEENP--FLLAGTKVQGGSGKMLVTTVGMRTEWGKLMETLNEGGEDETPLQVKLNGVATIIGKIELFFSVLEFLVLI 159 (563)
Q Consensus 82 ~~k~~~~~--~i~~Gt~v~~g~~~~~V~~tg~~t~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 159 (563)
+.|..+++ .+|+||.+.+|++.++|+++|.+|++|++.+++++++.+++|++..++.+...+..+.++..+. ++.
T Consensus 162 V~K~~G~~~~~V~aGT~v~~G~~~i~Vta~g~~S~lgki~~lve~a~~~ktp~e~al~~l~~~l~~i~l~~~~~---~~~ 238 (679)
T PRK01122 162 VIRESGGDFSSVTGGTRVLSDWIVIRITANPGESFLDRMIALVEGAKRQKTPNEIALTILLAGLTIIFLLVVAT---LPP 238 (679)
T ss_pred eEeCCCCccCeEEeceEEEeeeEEEEEEEecccCHHHHHHHHHHhccccCCHHHHHHHHHHHhhhHHHHHHHHH---HHH
Confidence 99986543 4999999999999999999999999999999999999999999987776655544322221111 111
Q ss_pred HHHhhccccccccccccchhhHHHHHHHHHHHHhhhhccCCchHHHHHHHHHHHHHHHhhCCCeeecchhhhhcCCeeee
Q 044020 160 GRFLGEKVIHNEFTDWSSADALTLIDYFAVVVTIIDVAVPEGLPLAVTLSLAFAMKKLMNDGALVRHLSACETMGSASCI 239 (563)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ili~~~P~~l~~~~~~~~~~~~~~l~~~~i~~k~~~~le~l~~v~~i 239 (563)
+.++.. .. ..+.+++++++++|||+++...++....++++|.++|+++|+.+++|.||++|++
T Consensus 239 ~~~~~g---------------~~--~~l~~~iallV~aiP~alg~l~~~i~i~g~~r~ak~gvLvk~~~avE~lg~v~~I 301 (679)
T PRK01122 239 FAAYSG---------------GA--LSITVLVALLVCLIPTTIGGLLSAIGIAGMDRVLQANVIATSGRAVEAAGDVDTL 301 (679)
T ss_pred HHHHhC---------------ch--HHHHHHHHHHHHcccchhhhHHHHHHHHHHHHHhcCCeeecCchHHHHhcCCCEE
Confidence 111100 01 1577788999999999999999999999999999999999999999999999999
Q ss_pred ecccccccccCceEEEEEEEcCeeeeecCCCccccccccccHHHHHHHHHHHHhccCCceeecCCCCceecCCccHHHHH
Q 044020 240 CTDKTRMLTTNHMVVDKIWIANTISNVEGNNRKDILQSEISERVLDITLQAIFQNTGSKVVKDKDGKNSILGTPTESAIL 319 (563)
Q Consensus 240 ~~DKTGTLT~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~al~ 319 (563)
|||||||||+|++.+.+++..+.. +++ .++..+..++.. ..||..+|++
T Consensus 302 ~~DKTGTLT~g~~~v~~~~~~~~~----------------~~~--~ll~~a~~~s~~-------------s~hP~~~AIv 350 (679)
T PRK01122 302 LLDKTGTITLGNRQASEFLPVPGV----------------TEE--ELADAAQLSSLA-------------DETPEGRSIV 350 (679)
T ss_pred EEeCCCCCcCCcEEEEEEEeCCCC----------------CHH--HHHHHHHHhcCC-------------CCCchHHHHH
Confidence 999999999999999998653321 111 122222232222 1389999999
Q ss_pred HHHHH-cCCChHHHhhhceEEEEecCCCCceeEEEEEEcCCCeEEEEEeCChhHHHhcccccccCCCccccCCHHHHHHH
Q 044020 320 EFGLR-LGGDFEAQRREFKIVKVEPFNSVRKKMSVLIALPAGGMRAFCKGASEIVLSMCDKVVSDNGEPVPLSEEQFRNI 398 (563)
Q Consensus 320 ~~~~~-~~~~~~~~~~~~~~~~~~~f~~~~~~~sviv~~~~~~~~~~~kG~~~~il~~c~~~~~~~~~~~~~~~~~~~~i 398 (563)
+++++ .+... .+..++..+.+||++.++++++.+. + ..+.||+++.+++.|.. +|... .+++
T Consensus 351 ~~a~~~~~~~~--~~~~~~~~~~~pF~s~~~~~gv~~~---g--~~~~kGa~e~il~~~~~----~g~~~------~~~~ 413 (679)
T PRK01122 351 VLAKQRFNLRE--RDLQSLHATFVPFSAQTRMSGVDLD---G--REIRKGAVDAIRRYVES----NGGHF------PAEL 413 (679)
T ss_pred HHHHhhcCCCc--hhhccccceeEeecCcCceEEEEEC---C--EEEEECCHHHHHHHHHh----cCCcC------hHHH
Confidence 99876 33322 2223566788999999988887542 2 47889999999999963 12221 1456
Q ss_pred HHHHHHHHHHHHhHhHhhhhccCCCCCCCCCCCCCceEEEEecccCCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHH
Q 044020 399 TDVINGFASEALRTLCLAFKDLNDSSNENNIPDSGYTLIAVVGIKDPVRPGVKEAVQTCLEAGITVRMVTGDNINTARAI 478 (563)
Q Consensus 399 ~~~~~~~~~~G~r~i~~a~~~l~~~~~~~~~~~~~~~~lG~i~~~d~~~~~~~~~I~~l~~~gi~v~i~TGd~~~~a~~~ 478 (563)
.+..+.++++|+|++++|+ |++++|+++++|++|++++++|++|+++||+++|+|||++.+|.++
T Consensus 414 ~~~~~~~a~~G~~~l~va~---------------~~~~lG~i~l~D~~R~~~~eai~~Lr~~GI~vvMiTGDn~~TA~aI 478 (679)
T PRK01122 414 DAAVDEVARKGGTPLVVAE---------------DNRVLGVIYLKDIVKPGIKERFAELRKMGIKTVMITGDNPLTAAAI 478 (679)
T ss_pred HHHHHHHHhCCCcEEEEEE---------------CCeEEEEEEEeccCchhHHHHHHHHHHCCCeEEEECCCCHHHHHHH
Confidence 6777889999999999983 5689999999999999999999999999999999999999999999
Q ss_pred HHHcCCCCCCCceeechhhhcCCCCCCCcceeEEEecChhhHHHHHHHHHHhcCCEEEEEcCCccCHHHHhhCCceEeec
Q 044020 479 AKECGILTSDGEAVEGPEFRNMSPADIIPKLQVMARSLPSDKHTLVTQLRNTFGEVVAVTGDGTNDASALHEADIGLAMG 558 (563)
Q Consensus 479 a~~lgi~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~~~~g~~v~~iGDg~ND~~~l~~a~vgiamg 558 (563)
|+++|+++ +|++++|++|.++|+.+|++ |+.|+|+|||.||.|||++||||||||
T Consensus 479 A~elGId~------------------------v~A~~~PedK~~iV~~lQ~~-G~~VaMtGDGvNDAPALa~ADVGIAMg 533 (679)
T PRK01122 479 AAEAGVDD------------------------FLAEATPEDKLALIRQEQAE-GRLVAMTGDGTNDAPALAQADVGVAMN 533 (679)
T ss_pred HHHcCCcE------------------------EEccCCHHHHHHHHHHHHHc-CCeEEEECCCcchHHHHHhCCEeEEeC
Confidence 99999986 99999999999999999998 999999999999999999999999999
Q ss_pred CCCCC
Q 044020 559 IAGTE 563 (563)
Q Consensus 559 ~~~~~ 563 (563)
+|+|
T Consensus 534 -sGTd 537 (679)
T PRK01122 534 -SGTQ 537 (679)
T ss_pred -CCCH
Confidence 8875
|
|
| >TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.3e-79 Score=692.71 Aligned_cols=538 Identities=23% Similarity=0.341 Sum_probs=429.5
Q ss_pred chhhHHHHHHHHHHHHHHHhccCeeEEEEC-CEEEEeecCCcccCcEEEeCCCCeeeceEEEEeeCc----eEEEeccCc
Q 044020 2 VTAISDYKQSLQFRDLDREKKKIFIQVTRD-GQRQKVCTYDLVVGDIVHLSIGDQVPAYGIFISGHS----LLIDESSLS 76 (563)
Q Consensus 2 ~~~~~~~~~~~~~~~l~~~~~~~~~~V~r~-g~~~~i~~~~L~~GDiI~v~~G~~iPaD~~ll~g~~----l~Vdes~lT 76 (563)
++++.++.+++++++.++..|+..++|+|+ |++++++|++|+|||+|.|++||++|||++|++++. ++||||.||
T Consensus 63 ~~~~~~~~ed~~r~~~d~~~n~~~~~v~~~~~~~~~i~~~~l~~GDiv~l~~g~~iPaD~~ll~ss~~~g~~~v~~s~l~ 142 (1057)
T TIGR01652 63 VTAIKEAIEDIRRRRRDKEVNNRLTEVLEGHGQFVEIPWKDLRVGDIVKVKKDERIPADLLLLSSSEPDGVCYVETANLD 142 (1057)
T ss_pred HHHHHHHHHHHHHHHhHHHHhCcEEEEECCCCcEEEeeeecccCCCEEEEcCCCcccceEEEEeccCCCceEEEEeeccC
Confidence 688999999999999999999999999997 899999999999999999999999999999998654 799999999
Q ss_pred CCCCcccccC-----------------------------------------------CCCeEEecceeec-CcEEEEEEE
Q 044020 77 GQSEPRYMYE-----------------------------------------------ENPFLLAGTKVQG-GSGKMLVTT 108 (563)
Q Consensus 77 Ges~p~~k~~-----------------------------------------------~~~~i~~Gt~v~~-g~~~~~V~~ 108 (563)
||+.|+.|.. .++++++||.+.+ |++.++|++
T Consensus 143 GEs~~~~k~~~~~~~~~~~~~~~~~~~~~i~~~~p~~~l~~F~G~~~~~~~~~~~l~~~N~l~rGs~l~nt~~~~gvVvy 222 (1057)
T TIGR01652 143 GETNLKLRQALEETQKMLDEDDIKNFSGEIECEQPNASLYSFQGNMTINGDRQYPLSPDNILLRGCTLRNTDWVIGVVVY 222 (1057)
T ss_pred CeecceEeecchhhhccCChhhHhhceEEEEEcCCCCcceEEEEEEEECCCCcccCCHHHhHhcCCEecCCCeEEEEEEE
Confidence 9999998752 1257889999998 999999999
Q ss_pred EcccchhHHHHHHhccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccch-------hhH
Q 044020 109 VGMRTEWGKLMETLNEGGEDETPLQVKLNGVATIIGKIELFFSVLEFLVLIGRFLGEKVIHNEFTDWSSA-------DAL 181 (563)
Q Consensus 109 tg~~t~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~ 181 (563)
||.+|.+++ .....+.+++++++.++++..++..+.++++++++++...+. .. .....|+.. ...
T Consensus 223 TG~~Tk~~~---n~~~~~~k~s~le~~ln~~~~~l~~~~i~l~~i~~i~~~~~~--~~---~~~~~~yl~~~~~~~~~~~ 294 (1057)
T TIGR01652 223 TGHDTKLMR---NATQAPSKRSRLEKELNFLIIILFCLLFVLCLISSVGAGIWN--DA---HGKDLWYIRLDVSERNAAA 294 (1057)
T ss_pred Echhhhhhh---cCCCCcccccHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhee--cc---cCCCccceecCcccccchh
Confidence 999996655 445557788999999999988877766666665555432111 00 001123221 112
Q ss_pred HHHHHHHHHHHhhhhccCCchHHHHHHHHHHHH------HHHhhC----CCeeecchhhhhcCCeeeeecccccccccCc
Q 044020 182 TLIDYFAVVVTIIDVAVPEGLPLAVTLSLAFAM------KKLMND----GALVRHLSACETMGSASCICTDKTRMLTTNH 251 (563)
Q Consensus 182 ~~~~~~~~~i~ili~~~P~~l~~~~~~~~~~~~------~~l~~~----~i~~k~~~~le~l~~v~~i~~DKTGTLT~~~ 251 (563)
.++..|..++.++..++|.+|++.+.++...+. .+|.++ ++.+|+.+..|+||++++||+|||||||+|+
T Consensus 295 ~~~~~~~~~~~L~~~~IPisL~v~l~l~~~~~~~~i~~D~~m~~~~~~~~~~vr~~~~~E~LG~v~~I~sDKTGTLT~N~ 374 (1057)
T TIGR01652 295 NGFFSFLTFLILFSSLIPISLYVSLELVKSVQAYFINSDLQMYHEKTDTPASVRTSNLNEELGQVEYIFSDKTGTLTQNI 374 (1057)
T ss_pred HHHHHHHHHHHHHhhhcceeeeehHHHHHHHHHHHHhhhhhhhccccCCcceeecCCChHHhcCeeEEEEcCCCceeeee
Confidence 344566778888889999999999999998888 777764 5999999999999999999999999999999
Q ss_pred eEEEEEEEcCeeeeecCCCc-------cc-----------c-----------cc----ccccHHHHHHHHHHHHhccCCc
Q 044020 252 MVVDKIWIANTISNVEGNNR-------KD-----------I-----------LQ----SEISERVLDITLQAIFQNTGSK 298 (563)
Q Consensus 252 ~~v~~i~~~~~~~~~~~~~~-------~~-----------~-----------~~----~~~~~~~~~~~~~~~~~~~~~~ 298 (563)
|.++++++++..|....... .. . .. .....+....+..++..||.+.
T Consensus 375 M~~~~~~i~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~lC~~v~ 454 (1057)
T TIGR01652 375 MEFKKCSIAGVSYGDGFTEIKDAIRERLGSYVENENSMLVESKGFTFVDPRLVDLLKTNKPNAKRINEFFLALALCHTVV 454 (1057)
T ss_pred EEEEEEEECCEEecCCcchHHHHhhhcccccccccccccccccccccCcHHHHHhhhcCCchhHHHHHHHHHHHhcCccc
Confidence 99999999887765321100 00 0 00 0000112334456677777776
Q ss_pred eeecCCC---CceecCCccHHHHHHHHHHcCCChHH--------------HhhhceEEEEecCCCCceeEEEEEEcCCCe
Q 044020 299 VVKDKDG---KNSILGTPTESAILEFGLRLGGDFEA--------------QRREFKIVKVEPFNSVRKKMSVLIALPAGG 361 (563)
Q Consensus 299 ~~~~~~~---~~~~~~~~~e~al~~~~~~~~~~~~~--------------~~~~~~~~~~~~f~~~~~~~sviv~~~~~~ 361 (563)
+..++++ ..+..++|+|.|++++|+..|+.+.. ....|++++.+||+++|||||++++.++++
T Consensus 455 ~~~~~~~~~~~~y~~~sp~E~ALl~~a~~~g~~~~~~~~~~~~~~i~~~~~~~~~~il~~~pF~s~rKrmSviv~~~~~~ 534 (1057)
T TIGR01652 455 PEFNDDGPEEITYQAASPDEAALVKAARDVGFVFFERTPKSISLLIEMHGETKEYEILNVLEFNSDRKRMSVIVRNPDGR 534 (1057)
T ss_pred ccccCCCCCceEEEccCCcHHHHHHHHHHCCCEEEEecCCceEEEEEeCCCEEEEEEEEecccCCCCCeEEEEEEeCCCe
Confidence 6532222 33567999999999999998876532 224689999999999999999999998888
Q ss_pred EEEEEeCChhHHHhcccccccCCCccccCCHHHHHHHHHHHHHHHHHHHhHhHhhhhccCCCCCC---------------
Q 044020 362 MRAFCKGASEIVLSMCDKVVSDNGEPVPLSEEQFRNITDVINGFASEALRTLCLAFKDLNDSSNE--------------- 426 (563)
Q Consensus 362 ~~~~~kG~~~~il~~c~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~G~r~i~~a~~~l~~~~~~--------------- 426 (563)
+++++||+|+.|+++|+.. +++.++++.+.+++++.+|+|++++|+|.++.++..
T Consensus 535 ~~l~~KGA~e~il~~~~~~----------~~~~~~~~~~~~~~~a~~GlRtL~~A~k~l~~~e~~~~~~~~~~a~~~~~~ 604 (1057)
T TIGR01652 535 IKLLCKGADTVIFKRLSSG----------GNQVNEETKEHLENYASEGLRTLCIAYRELSEEEYEEWNEEYNEASTALTD 604 (1057)
T ss_pred EEEEEeCcHHHHHHHhhcc----------chhHHHHHHHHHHHHHHcCCcEEEEEEEECCHHHHHHHHHHHHHHHhhhhh
Confidence 9999999999999999741 234567888999999999999999999999765311
Q ss_pred --------CCCCCCCceEEEEecccCCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCC---------
Q 044020 427 --------NNIPDSGYTLIAVVGIKDPVRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAKECGILTSDG--------- 489 (563)
Q Consensus 427 --------~~~~~~~~~~lG~i~~~d~~~~~~~~~I~~l~~~gi~v~i~TGd~~~~a~~~a~~lgi~~~~~--------- 489 (563)
...+|+|++|+|+++++|++|++++++|+.|+++||++||+|||+.++|.++|+++|+.+.+.
T Consensus 605 r~~~~~~~~~~iE~~L~~lG~~gieD~lq~~v~etI~~L~~AGIkv~mlTGD~~~TA~~IA~~~~ii~~~~~~~~i~~~~ 684 (1057)
T TIGR01652 605 REEKLDVVAESIEKDLILLGATAIEDKLQEGVPETIELLRQAGIKIWVLTGDKVETAINIGYSCRLLSRNMEQIVITSES 684 (1057)
T ss_pred HHHHHHHHHHHHHhcCEEEEEEEEhhhhhhccHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCeEEEEecCc
Confidence 124689999999999999999999999999999999999999999999999999999976432
Q ss_pred --------------------------------ceeechhhhcCCCCC-------C--CcceeEEEecChhhHHHHHHHHH
Q 044020 490 --------------------------------EAVEGPEFRNMSPAD-------I--IPKLQVMARSLPSDKHTLVTQLR 528 (563)
Q Consensus 490 --------------------------------~~~~g~~~~~~~~~~-------~--~~~~~v~~~~~p~~K~~~v~~l~ 528 (563)
.+++|..++.+.+++ + ..+..|+||++|+||.++|+.+|
T Consensus 685 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vV~aR~sP~qK~~IV~~lk 764 (1057)
T TIGR01652 685 LDATRSVEAAIKFGLEGTSEEFNNLGDSGNVALVIDGKSLGYALDEELEKEFLQLALKCKAVICCRVSPSQKADVVRLVK 764 (1057)
T ss_pred hhhhHHHHHHHHHHHHHHHHhhhhhccCCceEEEEccHHHHHHHhhHHHHHHHHHHhhCCEEEEeCCCHHHHHHHHHHHH
Confidence 256777666443321 1 23446999999999999999999
Q ss_pred HhcCCEEEEEcCCccCHHHHhhCCceEee
Q 044020 529 NTFGEVVAVTGDGTNDASALHEADIGLAM 557 (563)
Q Consensus 529 ~~~g~~v~~iGDg~ND~~~l~~a~vgiam 557 (563)
+..|+.|+|+|||.||++||++|||||++
T Consensus 765 ~~~~~~vl~iGDG~ND~~mlk~AdVGIgi 793 (1057)
T TIGR01652 765 KSTGKTTLAIGDGANDVSMIQEADVGVGI 793 (1057)
T ss_pred hcCCCeEEEEeCCCccHHHHhhcCeeeEe
Confidence 86689999999999999999999999975
|
This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes. |
| >PRK14010 potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.9e-78 Score=638.94 Aligned_cols=443 Identities=23% Similarity=0.348 Sum_probs=353.7
Q ss_pred HHHHHHHHHHHHHHhccCeeE-EEECCEEEEeecCCcccCcEEEeCCCCeeeceEEEEeeCceEEEeccCcCCCCccccc
Q 044020 7 DYKQSLQFRDLDREKKKIFIQ-VTRDGQRQKVCTYDLVVGDIVHLSIGDQVPAYGIFISGHSLLIDESSLSGQSEPRYMY 85 (563)
Q Consensus 7 ~~~~~~~~~~l~~~~~~~~~~-V~r~g~~~~i~~~~L~~GDiI~v~~G~~iPaD~~ll~g~~l~Vdes~lTGes~p~~k~ 85 (563)
+++.+++...|.+...+.+++ |.|||++++|++++|+|||+|.|++||+|||||+|++|.. .||||+|||||.|+.|.
T Consensus 87 e~ra~~~~~~L~~~~~~~~a~~v~rdg~~~~I~a~eLv~GDiV~v~~Gd~IPaDG~vieG~~-~VDESaLTGES~PV~K~ 165 (673)
T PRK14010 87 EGRGKAQANALRQTQTEMKARRIKQDGSYEMIDASDLKKGHIVRVATGEQIPNDGKVIKGLA-TVDESAITGESAPVIKE 165 (673)
T ss_pred HHHHHHHHHHHHcCCCcceEEEEEeCCEEEEEEHHHcCCCCEEEECCCCcccCCeEEEEcce-EEecchhcCCCCceecc
Confidence 444444455555544443564 7799999999999999999999999999999999999976 99999999999999998
Q ss_pred CC---CCeEEecceeecCcEEEEEEEEcccchhHHHHHHhccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 044020 86 EE---NPFLLAGTKVQGGSGKMLVTTVGMRTEWGKLMETLNEGGEDETPLQVKLNGVATIIGKIELFFSVLEFLVLIGRF 162 (563)
Q Consensus 86 ~~---~~~i~~Gt~v~~g~~~~~V~~tg~~t~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 162 (563)
.+ ++ +|+||.+.+|++.++|+++|.+|++|++.++++.++.+++|++.....+...+ .+.++++++++..+
T Consensus 166 ~g~d~~~-V~aGT~v~~G~~~i~Vta~g~~T~lgki~~lve~a~~~ktp~e~~l~~l~~~l-----~ii~l~~~~~~~~~ 239 (673)
T PRK14010 166 SGGDFDN-VIGGTSVASDWLEVEITSEPGHSFLDKMIGLVEGATRKKTPNEIALFTLLMTL-----TIIFLVVILTMYPL 239 (673)
T ss_pred CCCccCe-eecCceeecceEEEEEEEecccCHHHHHHHHHhhccccCCHHHHHHHHHHHHH-----hHHHHHHHHHHHHH
Confidence 77 56 99999999999999999999999999999999998989999986554432221 11111121111111
Q ss_pred hhccccccccccccchhhHHHHHHHHHHHHhhhhccCCchHHHHHHHHHHHHHHHhhCCCeeecchhhhhcCCeeeeecc
Q 044020 163 LGEKVIHNEFTDWSSADALTLIDYFAVVVTIIDVAVPEGLPLAVTLSLAFAMKKLMNDGALVRHLSACETMGSASCICTD 242 (563)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ili~~~P~~l~~~~~~~~~~~~~~l~~~~i~~k~~~~le~l~~v~~i~~D 242 (563)
.. + ..+...+.+.++++++++||+|+..++++...++++|+++|+++|+.+++|.||++|++|||
T Consensus 240 ~~----------~-----~~~~~~~~~~val~V~~IP~aL~~~~~~~~~~g~~r~ak~gvLvk~~~avE~lg~v~vI~~D 304 (673)
T PRK14010 240 AK----------F-----LNFNLSIAMLIALAVCLIPTTIGGLLSAIGIAGMDRVTQFNILAKSGRSVETCGDVNVLILD 304 (673)
T ss_pred Hh----------h-----ccHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhhCCEEEeCcHHHHHhhCCCEEEEe
Confidence 00 0 01223456677777888999999999999999999999999999999999999999999999
Q ss_pred cccccccCceEEEEEEEcCeeeeecCCCccccccccccHHHHHHHHHHHHhccCCceeecCCCCceecCCccHHHHHHHH
Q 044020 243 KTRMLTTNHMVVDKIWIANTISNVEGNNRKDILQSEISERVLDITLQAIFQNTGSKVVKDKDGKNSILGTPTESAILEFG 322 (563)
Q Consensus 243 KTGTLT~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~al~~~~ 322 (563)
||||||+|++.+.++...+.. + ..+++..+..++.. +.||++.|+++++
T Consensus 305 KTGTLT~Gn~~~~~~~~~~~~----------------~--~~~ll~~a~~~~~~-------------s~~P~~~AIv~~a 353 (673)
T PRK14010 305 KTGTITYGNRMADAFIPVKSS----------------S--FERLVKAAYESSIA-------------DDTPEGRSIVKLA 353 (673)
T ss_pred CCCcCCCCCeEEEEEEeCCCc----------------c--HHHHHHHHHHhcCC-------------CCChHHHHHHHHH
Confidence 999999998888775432210 1 11222233333322 1399999999999
Q ss_pred HHcCCChHHHhhhceEEEEecCCCCceeEEEEEEcCCCeEEEEEeCChhHHHhcccccccCCCccccCCHHHHHHHHHHH
Q 044020 323 LRLGGDFEAQRREFKIVKVEPFNSVRKKMSVLIALPAGGMRAFCKGASEIVLSMCDKVVSDNGEPVPLSEEQFRNITDVI 402 (563)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~f~~~~~~~sviv~~~~~~~~~~~kG~~~~il~~c~~~~~~~~~~~~~~~~~~~~i~~~~ 402 (563)
++.+.+.... ....+||++++|+|++.+. +. .+.||+++.+++.|+. +|...+. .+.+..
T Consensus 354 ~~~~~~~~~~-----~~~~~pF~~~~k~~gv~~~---g~--~i~kGa~~~il~~~~~----~g~~~~~------~~~~~~ 413 (673)
T PRK14010 354 YKQHIDLPQE-----VGEYIPFTAETRMSGVKFT---TR--EVYKGAPNSMVKRVKE----AGGHIPV------DLDALV 413 (673)
T ss_pred HHcCCCchhh-----hcceeccccccceeEEEEC---CE--EEEECCHHHHHHHhhh----cCCCCch------HHHHHH
Confidence 8776553221 1234899999999998753 22 4559999999999974 1222221 245566
Q ss_pred HHHHHHHHhHhHhhhhccCCCCCCCCCCCCCceEEEEecccCCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHc
Q 044020 403 NGFASEALRTLCLAFKDLNDSSNENNIPDSGYTLIAVVGIKDPVRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAKEC 482 (563)
Q Consensus 403 ~~~~~~G~r~i~~a~~~l~~~~~~~~~~~~~~~~lG~i~~~d~~~~~~~~~I~~l~~~gi~v~i~TGd~~~~a~~~a~~l 482 (563)
+.++++|+|+++++ .|++++|+++++|++|++++++|++||++||+++|+|||++.+|.++|+++
T Consensus 414 ~~~a~~G~~~l~v~---------------~~~~~lG~i~l~Dp~R~~a~e~I~~Lr~~GI~vvMiTGDn~~TA~aIA~el 478 (673)
T PRK14010 414 KGVSKKGGTPLVVL---------------EDNEILGVIYLKDVIKDGLVERFRELREMGIETVMCTGDNELTAATIAKEA 478 (673)
T ss_pred HHHHhCCCeEEEEE---------------ECCEEEEEEEeecCCcHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHc
Confidence 77889999998765 356999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCceeechhhhcCCCCCCCcceeEEEecChhhHHHHHHHHHHhcCCEEEEEcCCccCHHHHhhCCceEeecCCCC
Q 044020 483 GILTSDGEAVEGPEFRNMSPADIIPKLQVMARSLPSDKHTLVTQLRNTFGEVVAVTGDGTNDASALHEADIGLAMGIAGT 562 (563)
Q Consensus 483 gi~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~~~~g~~v~~iGDg~ND~~~l~~a~vgiamg~~~~ 562 (563)
|++. +|++++|++|.++|+.+|++ |+.|+|+|||.||.|+|++|||||||| +|+
T Consensus 479 GI~~------------------------v~A~~~PedK~~iV~~lQ~~-G~~VaMtGDGvNDAPALa~ADVGIAMg-sGT 532 (673)
T PRK14010 479 GVDR------------------------FVAECKPEDKINVIREEQAK-GHIVAMTGDGTNDAPALAEANVGLAMN-SGT 532 (673)
T ss_pred CCce------------------------EEcCCCHHHHHHHHHHHHhC-CCEEEEECCChhhHHHHHhCCEEEEeC-CCC
Confidence 9986 99999999999999999998 999999999999999999999999999 887
Q ss_pred C
Q 044020 563 E 563 (563)
Q Consensus 563 ~ 563 (563)
|
T Consensus 533 d 533 (673)
T PRK14010 533 M 533 (673)
T ss_pred H
Confidence 5
|
|
| >KOG0203 consensus Na+/K+ ATPase, alpha subunit [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-79 Score=624.60 Aligned_cols=541 Identities=31% Similarity=0.444 Sum_probs=464.6
Q ss_pred hhhHHHHHHHHHHHHHHH---hccCeeEEEECCEEEEeecCCcccCcEEEeCCCCeeeceEEEEeeCceEEEeccCcCCC
Q 044020 3 TAISDYKQSLQFRDLDRE---KKKIFIQVTRDGQRQKVCTYDLVVGDIVHLSIGDQVPAYGIFISGHSLLIDESSLSGQS 79 (563)
Q Consensus 3 ~~~~~~~~~~~~~~l~~~---~~~~~~~V~r~g~~~~i~~~~L~~GDiI~v~~G~~iPaD~~ll~g~~l~Vdes~lTGes 79 (563)
+.+..|.++.+..+..+. ..++.++|+|||....+.+++||+||+|.++.|+++|||.+++++..++||+|++||||
T Consensus 139 tg~~~~~qe~ks~~im~sF~~l~P~~~~ViRdg~k~~i~~eelVvGD~v~vk~GdrVPADiRiis~~g~~vdnsslTGes 218 (1019)
T KOG0203|consen 139 TGLFSYYQEAKSSKIMDSFKNLVPQQALVIRDGEKMTINAEELVVGDLVEVKGGDRVPADIRIISATGCKVDNSSLTGES 218 (1019)
T ss_pred EecCCCccchhhHHHHHHHhccchhhheeeecceeEEechhhcccccceeeccCCcccceeEEEEecceeEecccccccc
Confidence 334445555555554444 34668999999999999999999999999999999999999999999999999999999
Q ss_pred Cccccc---------CCCCeEEecceeecCcEEEEEEEEcccchhHHHHHHhccCCCCCCchHHHHHHHHHHHHHHHHHH
Q 044020 80 EPRYMY---------EENPFLLAGTKVQGGSGKMLVTTVGMRTEWGKLMETLNEGGEDETPLQVKLNGVATIIGKIELFF 150 (563)
Q Consensus 80 ~p~~k~---------~~~~~i~~Gt~v~~g~~~~~V~~tg~~t~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 150 (563)
+|..+. +..|+-|.+|.+++|.++++|++||.+|.+|++..+.......++|++..++++..++...++++
T Consensus 219 EP~~~~~~~t~~~~~Et~Ni~f~st~~veG~~~givi~tGd~Tv~G~ia~l~~~~~~~~t~~~~ei~~fi~~it~vAi~~ 298 (1019)
T KOG0203|consen 219 EPQTRSPEFTHENPLETRNIAFFSTNCVEGTGRGIVIATGDRTVMGRIASLASGLEDGKTPIAKEIEHFIHIITGVAIFL 298 (1019)
T ss_pred CCccCCccccccCchhheeeeeeeeEEecceEEEEEEecCCceEEeehhhhhccCCCCCCcchhhhhchHHHHHHHHHHH
Confidence 998876 34567899999999999999999999999999998887778889999999999999999888888
Q ss_pred HHHHHHHHHHHHhhccccccccccccchhhHHHHHHHHHHHHhhhhccCCchHHHHHHHHHHHHHHHhhCCCeeecchhh
Q 044020 151 SVLEFLVLIGRFLGEKVIHNEFTDWSSADALTLIDYFAVVVTIIDVAVPEGLPLAVTLSLAFAMKKLMNDGALVRHLSAC 230 (563)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ili~~~P~~l~~~~~~~~~~~~~~l~~~~i~~k~~~~l 230 (563)
++..|++..... ..+..++.+.++++++.+|.+|+..++.++....++|+++++++||.++.
T Consensus 299 ~i~fF~~~~~~g------------------y~~l~avv~~i~iivAnvPeGL~~tvTv~LtltakrMa~Knc~vknLeav 360 (1019)
T KOG0203|consen 299 GISFFILALILG------------------YEWLRAVVFLIGIIVANVPEGLLATVTVCLTLTAKRMARKNCLVKNLEAV 360 (1019)
T ss_pred HHHHHHHHHhhc------------------chhHHHhhhhheeEEecCcCCccceehhhHHHHHHHHhhceeEEeeeehe
Confidence 887776654321 14566777789999999999999999999999999999999999999999
Q ss_pred hhcCCeeeeecccccccccCceEEEEEEEcCeeeeecCCCccccccccccHHHHHHHHHHHHhccCCceeecCCC----C
Q 044020 231 ETMGSASCICTDKTRMLTTNHMVVDKIWIANTISNVEGNNRKDILQSEISERVLDITLQAIFQNTGSKVVKDKDG----K 306 (563)
Q Consensus 231 e~l~~v~~i~~DKTGTLT~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~ 306 (563)
|.||..+++|.|||||||+|.|.|.++|.++.....+.............+.....+..+...|+.+.+...+.+ .
T Consensus 361 etlGsts~I~SDktGTlTqnrMtVahlw~d~~i~~~d~~~~~~~~~~~~~~~~~~~l~r~~~lCn~a~~~~gq~dvPv~k 440 (1019)
T KOG0203|consen 361 ETLGSTSTICSDKTGTLTQNRMTVAHLWFDNQIHEADTTEDQSGQSFDKSSATFIALSRIATLCNRAVFKPGQDDVPVLK 440 (1019)
T ss_pred eecccceeEeecceeeEEecceEEEeeccCCceeeeechhhhhcccccccCchHHHHHHHHHHhCcceecccccCCceee
Confidence 999999999999999999999999999999887655543222222222234455556666677777666544433 2
Q ss_pred ceecCCccHHHHHHHHHHcCCChHHHhhhceEEEEecCCCCceeEEEEEEcCC---CeEEEEEeCChhHHHhcccccccC
Q 044020 307 NSILGTPTESAILEFGLRLGGDFEAQRREFKIVKVEPFNSVRKKMSVLIALPA---GGMRAFCKGASEIVLSMCDKVVSD 383 (563)
Q Consensus 307 ~~~~~~~~e~al~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~sviv~~~~---~~~~~~~kG~~~~il~~c~~~~~~ 383 (563)
....|++.|.||++++...-.+....++.++.+..+||+|.+|++-.+...++ ..+.+.+||+||.++++|+.++.
T Consensus 441 k~v~G~~se~ALlk~~e~~~~~~~~~R~~~~kv~eipfNSt~Kyqlsih~~~d~~~~~~~l~mKGape~il~~CSTi~i- 519 (1019)
T KOG0203|consen 441 RDVAGDASEVALLKFIELILGSVMELRERNPKVAEIPFNSTNKYQLSIHETEDPSDPRFLLVMKGAPERILDRCSTILI- 519 (1019)
T ss_pred eeccCCHHHHHHHHHHHHhcchHHHHHHhhHHhhcCCcccccceEEEEEecCCCCCccceeeecCChHHHHhhccceee-
Confidence 36779999999999999888888899999999999999999999988887755 56788999999999999999876
Q ss_pred CCccccCCHHHHHHHHHHHHHHHHHHHhHhHhhhhccCCCCC---------CCCCCCCCceEEEEecccCCCCcchHHHH
Q 044020 384 NGEPVPLSEEQFRNITDVINGFASEALRTLCLAFKDLNDSSN---------ENNIPDSGYTLIAVVGIKDPVRPGVKEAV 454 (563)
Q Consensus 384 ~~~~~~~~~~~~~~i~~~~~~~~~~G~r~i~~a~~~l~~~~~---------~~~~~~~~~~~lG~i~~~d~~~~~~~~~I 454 (563)
+|+..|++++.++.++..+..++..|.||++||++.++.... ..++.-.++.|+|++++-||+|..+.+|+
T Consensus 520 ~g~e~pld~~~~~~f~~ay~~lg~~GerVlgF~~~~l~~~~~p~~~~f~~d~~n~p~~nl~FlGl~s~idPPR~~vP~Av 599 (1019)
T KOG0203|consen 520 NGEEKPLDEKLKEAFQEAYLELGGLGERVLGFCDLELPDEKFPRGFQFDTDDVNFPTDNLRFLGLISMIDPPRAAVPDAV 599 (1019)
T ss_pred cCCCCCcCHHHHHHHHHHHHHhhhcchHHHHHHHHhcchhcCCCceEeecCCCCCcchhccccchhhccCCCcccCchhh
Confidence 489999999999999999999999999999999999997642 33577789999999999999999999999
Q ss_pred HHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCC------------------------CCceeechhhhcCCCC---CC--
Q 044020 455 QTCLEAGITVRMVTGDNINTARAIAKECGILTS------------------------DGEAVEGPEFRNMSPA---DI-- 505 (563)
Q Consensus 455 ~~l~~~gi~v~i~TGd~~~~a~~~a~~lgi~~~------------------------~~~~~~g~~~~~~~~~---~~-- 505 (563)
.+|+.+||+|+|+|||++.+|+++|+..||... ...+++|.++.++..+ ++
T Consensus 600 ~~CrsAGIkvimVTgdhpiTAkAiA~~vgIi~~~~et~e~~a~r~~~~v~~vn~~~a~a~VihG~eL~~~~~~qld~il~ 679 (1019)
T KOG0203|consen 600 GKCRSAGIKVIMVTGDHPITAKAIAKSVGIISEGSETVEDIAKRLNIPVEQVNSRDAKAAVIHGSELPDMSSEQLDELLQ 679 (1019)
T ss_pred hhhhhhCceEEEEecCccchhhhhhhheeeecCCchhhhhhHHhcCCcccccCccccceEEEecccccccCHHHHHHHHH
Confidence 999999999999999999999999999997652 2357888888888766 22
Q ss_pred CcceeEEEecChhhHHHHHHHHHHhcCCEEEEEcCCccCHHHHhhCCceEeecCCCCC
Q 044020 506 IPKLQVMARSLPSDKHTLVTQLRNTFGEVVAVTGDGTNDASALHEADIGLAMGIAGTE 563 (563)
Q Consensus 506 ~~~~~v~~~~~p~~K~~~v~~l~~~~g~~v~~iGDg~ND~~~l~~a~vgiamg~~~~~ 563 (563)
.....||||.+|+||.-+|+.+|+. |..|+++|||.||.||||.||+|||||+.|+|
T Consensus 680 nh~eIVFARTSPqQKLiIVe~cQr~-GaiVaVTGDGVNDsPALKKADIGVAMGiaGSD 736 (1019)
T KOG0203|consen 680 NHQEIVFARTSPQQKLIIVEGCQRQ-GAIVAVTGDGVNDSPALKKADIGVAMGIAGSD 736 (1019)
T ss_pred hCCceEEEecCccceEEeEhhhhhc-CcEEEEeCCCcCCChhhcccccceeeccccch
Confidence 2333599999999999999999998 99999999999999999999999999999875
|
|
| >PLN03190 aminophospholipid translocase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.2e-76 Score=662.40 Aligned_cols=548 Identities=22% Similarity=0.298 Sum_probs=421.1
Q ss_pred CchhhHHHHHHHHHHHHHHHhccCeeEEEECCEEEEeecCCcccCcEEEeCCCCeeeceEEEEeeCc----eEEEeccCc
Q 044020 1 MVTAISDYKQSLQFRDLDREKKKIFIQVTRDGQRQKVCTYDLVVGDIVHLSIGDQVPAYGIFISGHS----LLIDESSLS 76 (563)
Q Consensus 1 ~~~~~~~~~~~~~~~~l~~~~~~~~~~V~r~g~~~~i~~~~L~~GDiI~v~~G~~iPaD~~ll~g~~----l~Vdes~lT 76 (563)
++++++++.+++++++.++..|+..++|+|+|.+++++|++|+|||+|+|++||.+|||+++++++. ++||||+||
T Consensus 148 ~v~~ike~~Ed~~r~k~d~~~N~~~~~v~~~~~~~~i~~~~i~vGDiv~v~~ge~iPaD~~ll~Ss~~~G~~~Vdts~Ld 227 (1178)
T PLN03190 148 LVTAVKDAYEDWRRHRSDRIENNRLAWVLVDDQFQEKKWKDIRVGEIIKIQANDTLPCDMVLLSTSDPTGVAYVQTINLD 227 (1178)
T ss_pred HHHHHHHHHHHHHHHHhHHhhcCcEEEEEECCeEEEEeHHHCCCCCEEEECCCCEeeeeEEEEeccCCCceEEEEccccC
Confidence 3678999999999999999999999999999999999999999999999999999999999998433 699999999
Q ss_pred CCCCcccccC--------------------------------------------CCCeEEecceeec-CcEEEEEEEEcc
Q 044020 77 GQSEPRYMYE--------------------------------------------ENPFLLAGTKVQG-GSGKMLVTTVGM 111 (563)
Q Consensus 77 Ges~p~~k~~--------------------------------------------~~~~i~~Gt~v~~-g~~~~~V~~tg~ 111 (563)
||+.|+.|.. .++++++|+.+.+ .++.++|++||.
T Consensus 228 GEt~~k~k~~~~~~~~~~~~~~~~~~~i~~e~Pn~~l~~F~G~i~~~~~~~~l~~~n~llRG~~LrnT~~i~GvVVYTG~ 307 (1178)
T PLN03190 228 GESNLKTRYAKQETLSKIPEKEKINGLIKCEKPNRNIYGFQANMEVDGKRLSLGPSNIILRGCELKNTAWAIGVAVYCGR 307 (1178)
T ss_pred CeeeeeEecccchhhhcchhhhhceEEEEEeCCCccceeEEEEEEECCCcccCCccceeeccceecCCceEEEEEEEech
Confidence 9999988751 1345667777775 379999999999
Q ss_pred cchhHHHHHHhccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccch-------------
Q 044020 112 RTEWGKLMETLNEGGEDETPLQVKLNGVATIIGKIELFFSVLEFLVLIGRFLGEKVIHNEFTDWSSA------------- 178 (563)
Q Consensus 112 ~t~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------- 178 (563)
+|. ++.+....+.+.+++++.++++..++..+.+++++++.++...+.. ......++..|+..
T Consensus 308 dTK---~~~N~~~~~~K~S~le~~~N~~vi~l~~i~~~l~~i~~i~~~~~~~-~~~~~~~yl~~~~~~~~~~~~~~~~~~ 383 (1178)
T PLN03190 308 ETK---AMLNNSGAPSKRSRLETRMNLEIIILSLFLIALCTIVSVCAAVWLR-RHRDELDTIPFYRRKDFSEGGPKNYNY 383 (1178)
T ss_pred hhh---HhhcCCCCCCCccHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhhhc-ccccccccccccccccccccccccccc
Confidence 994 5555556678899999999999888777766666655554322111 00000111122210
Q ss_pred hh--HHHHHHHHHHHHhhhhccCCchHHHHHHHHHHHHHHHhhCC----------CeeecchhhhhcCCeeeeecccccc
Q 044020 179 DA--LTLIDYFAVVVTIIDVAVPEGLPLAVTLSLAFAMKKLMNDG----------ALVRHLSACETMGSASCICTDKTRM 246 (563)
Q Consensus 179 ~~--~~~~~~~~~~i~ili~~~P~~l~~~~~~~~~~~~~~l~~~~----------i~~k~~~~le~l~~v~~i~~DKTGT 246 (563)
.. ...+..|...+.++...+|.+|++.+.+........+.+.. +.+|+.+..|+||+|++||+|||||
T Consensus 384 ~~~~~~~~~~f~~~lil~~~~IPISL~Vtleivk~~qa~~I~~D~~m~~~~~~~~~~vr~snl~EeLGqV~yIfSDKTGT 463 (1178)
T PLN03190 384 YGWGWEIFFTFLMSVIVFQIMIPISLYISMELVRVGQAYFMIRDDQMYDEASNSRFQCRALNINEDLGQIKYVFSDKTGT 463 (1178)
T ss_pred chhhHHHHHHHHHHHHHHHhhcceeeeeeHHHHHHHHHHHHHhhhhcccccCCCcceeccCcchhhhccceEEEEcCCCc
Confidence 00 11122333445566688999999999999866555554332 7799999999999999999999999
Q ss_pred cccCceEEEEEEEcCeeeeecCCC-------------cc-----ccc--c--------cc---ccHHHHHHHHHHHHhcc
Q 044020 247 LTTNHMVVDKIWIANTISNVEGNN-------------RK-----DIL--Q--------SE---ISERVLDITLQAIFQNT 295 (563)
Q Consensus 247 LT~~~~~v~~i~~~~~~~~~~~~~-------------~~-----~~~--~--------~~---~~~~~~~~~~~~~~~~~ 295 (563)
||+|.|.++++++.+..|+..... .. ... . .. ........+..++..||
T Consensus 464 LT~N~M~fk~~~i~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~fl~~lalCh 543 (1178)
T PLN03190 464 LTENKMEFQCASIWGVDYSDGRTPTQNDHAGYSVEVDGKILRPKMKVKVDPQLLELSKSGKDTEEAKHVHDFFLALAACN 543 (1178)
T ss_pred cccceEEEEEEEECCEEcccccccchhhhhccccccccccccccccccCCHHHHhhhhccccchhhHHHHHHHHHHHhcC
Confidence 999999999999987766421100 00 000 0 00 00112234556777788
Q ss_pred CCceeecCC--C-----CceecCCccHHHHHHHHHHcCC------------ChHHHhhhceEEEEecCCCCceeEEEEEE
Q 044020 296 GSKVVKDKD--G-----KNSILGTPTESAILEFGLRLGG------------DFEAQRREFKIVKVEPFNSVRKKMSVLIA 356 (563)
Q Consensus 296 ~~~~~~~~~--~-----~~~~~~~~~e~al~~~~~~~~~------------~~~~~~~~~~~~~~~~f~~~~~~~sviv~ 356 (563)
++.+...++ + ..+...+|+|.||+++|...|+ +..+.+..|+++..+||+++||||||+++
T Consensus 544 tv~~~~~~~~~~~~~~~~~Y~a~SPdE~ALv~~a~~~G~~l~~r~~~~i~i~~~~~~~~~~il~~~pF~S~rKrMSvIv~ 623 (1178)
T PLN03190 544 TIVPIVVDDTSDPTVKLMDYQGESPDEQALVYAAAAYGFMLIERTSGHIVIDIHGERQRFNVLGLHEFDSDRKRMSVILG 623 (1178)
T ss_pred CceeeccCCCCCccccceEEecCCCcHHHHHHHHHHCCCeEecccCCeEEEeeccceecceeEEEecccccccEEEEEEE
Confidence 876642211 1 2366679999999999999997 44556678999999999999999999999
Q ss_pred cCCCeEEEEEeCChhHHHhcccccccCCCccccCCHHHHHHHHHHHHHHHHHHHhHhHhhhhccCCCCCC----------
Q 044020 357 LPAGGMRAFCKGASEIVLSMCDKVVSDNGEPVPLSEEQFRNITDVINGFASEALRTLCLAFKDLNDSSNE---------- 426 (563)
Q Consensus 357 ~~~~~~~~~~kG~~~~il~~c~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~G~r~i~~a~~~l~~~~~~---------- 426 (563)
.+++.+++++||+|+.|+++|+... +++.++++.+.+++|+++|+||+++|||.++.++..
T Consensus 624 ~~~~~~~l~~KGA~e~il~~~~~~~---------~~~~~~~~~~~l~~~a~~GlRtL~lA~k~l~~~e~~~~~~~~~~a~ 694 (1178)
T PLN03190 624 CPDKTVKVFVKGADTSMFSVIDRSL---------NMNVIRATEAHLHTYSSLGLRTLVVGMRELNDSEFEQWHFSFEAAS 694 (1178)
T ss_pred cCCCcEEEEEecCcHHHHHhhcccc---------cchhHHHHHHHHHHHHhcCCceEEEEEEeCCHHHHhhHHHHHHHhh
Confidence 8888899999999999999997532 234567788999999999999999999999764321
Q ss_pred -------------CCCCCCCceEEEEecccCCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCC----
Q 044020 427 -------------NNIPDSGYTLIAVVGIKDPVRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAKECGILTSDG---- 489 (563)
Q Consensus 427 -------------~~~~~~~~~~lG~i~~~d~~~~~~~~~I~~l~~~gi~v~i~TGd~~~~a~~~a~~lgi~~~~~---- 489 (563)
...+|.|++++|+++++|++|++++++|+.|+++|++++|+|||+..+|.++|+.+||.+.+.
T Consensus 695 ~~~~~r~~~l~~~~~~iE~dL~~lG~~~~~D~lr~~v~~~I~~l~~agi~v~mlTGD~~~tAi~IA~s~~Ll~~~~~~i~ 774 (1178)
T PLN03190 695 TALIGRAALLRKVASNVENNLTILGASAIEDKLQQGVPEAIESLRTAGIKVWVLTGDKQETAISIGYSSKLLTNKMTQII 774 (1178)
T ss_pred hhhhhhHHHHHhhHHhhhcCcEEEEEEEEecCCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHhCCCCCCCeeEE
Confidence 135689999999999999999999999999999999999999999999999999999865431
Q ss_pred ---------------------------------------------ceeechhhhcCCCC-------C--CCcceeEEEec
Q 044020 490 ---------------------------------------------EAVEGPEFRNMSPA-------D--IIPKLQVMARS 515 (563)
Q Consensus 490 ---------------------------------------------~~~~g~~~~~~~~~-------~--~~~~~~v~~~~ 515 (563)
.+++|..+..+... + ...+..++||+
T Consensus 775 i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lVIdG~~L~~~l~~~~~~~f~~l~~~~~~VI~cR~ 854 (1178)
T PLN03190 775 INSNSKESCRKSLEDALVMSKKLTTVSGISQNTGGSSAAASDPVALIIDGTSLVYVLDSELEEQLFQLASKCSVVLCCRV 854 (1178)
T ss_pred ecCCchhhHHHHHHHHhhhhhhccccccccccccccccccCCceEEEEEcHHHHHHhhhHHHHHHHHHHHhCCEEEEecC
Confidence 34555555444321 1 12344589999
Q ss_pred ChhhHHHHHHHHHHhcCCEEEEEcCCccCHHHHhhCCceEeecCCCCC
Q 044020 516 LPSDKHTLVTQLRNTFGEVVAVTGDGTNDASALHEADIGLAMGIAGTE 563 (563)
Q Consensus 516 ~p~~K~~~v~~l~~~~g~~v~~iGDg~ND~~~l~~a~vgiamg~~~~~ 563 (563)
+|.||.++|+.+|+..++.|+|+|||.||++||++||||| |+.|+|
T Consensus 855 sP~QKa~IV~~vk~~~~~vtlaIGDGaNDv~mIq~AdVGI--GIsG~E 900 (1178)
T PLN03190 855 APLQKAGIVALVKNRTSDMTLAIGDGANDVSMIQMADVGV--GISGQE 900 (1178)
T ss_pred CHHHHHHHHHHHHhcCCcEEEEECCCcchHHHHHhcCeee--eecCch
Confidence 9999999999999874689999999999999999999999 556654
|
|
| >TIGR01497 kdpB K+-transporting ATPase, B subunit | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-75 Score=617.34 Aligned_cols=453 Identities=25% Similarity=0.323 Sum_probs=367.3
Q ss_pred chhhHHHHHHHHHHHHHHHhccCeeEEEE-CCEEEEeecCCcccCcEEEeCCCCeeeceEEEEeeCceEEEeccCcCCCC
Q 044020 2 VTAISDYKQSLQFRDLDREKKKIFIQVTR-DGQRQKVCTYDLVVGDIVHLSIGDQVPAYGIFISGHSLLIDESSLSGQSE 80 (563)
Q Consensus 2 ~~~~~~~~~~~~~~~l~~~~~~~~~~V~r-~g~~~~i~~~~L~~GDiI~v~~G~~iPaD~~ll~g~~l~Vdes~lTGes~ 80 (563)
+++..+++.+++.++|.+..++..++|+| ||+++.|++++|+|||+|.|++||+|||||+|++|.. .||||+|||||.
T Consensus 83 ~e~~ae~ra~~~~~~L~~~~~~~~a~vlr~dg~~~~V~~~~L~~GDiV~V~~Gd~IPaDG~vieG~~-~VDESaLTGES~ 161 (675)
T TIGR01497 83 AEAVAEGRGKAQADSLKGTKKTTFAKLLRDDGAIDKVPADQLKKGDIVLVEAGDVIPCDGEVIEGVA-SVDESAITGESA 161 (675)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCceEEEEeeCCEEEEEEHHHCCCCCEEEECCCCEEeeeEEEEEccE-EEEcccccCCCC
Confidence 45567777777777777765555688885 8999999999999999999999999999999999965 999999999999
Q ss_pred cccccCCCC--eEEecceeecCcEEEEEEEEcccchhHHHHHHhccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 044020 81 PRYMYEENP--FLLAGTKVQGGSGKMLVTTVGMRTEWGKLMETLNEGGEDETPLQVKLNGVATIIGKIELFFSVLEFLVL 158 (563)
Q Consensus 81 p~~k~~~~~--~i~~Gt~v~~g~~~~~V~~tg~~t~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 158 (563)
|+.|..+++ .+|+||.+.+|++.++|+++|.+|++|++.++++.++.+++|++..++.+..++..+. .++.+.++
T Consensus 162 PV~K~~g~~~~~V~aGT~v~~G~~~i~Vt~~g~~S~lgri~~lve~a~~~ktplq~~l~~l~~~l~~v~---li~~~~~~ 238 (675)
T TIGR01497 162 PVIKESGGDFASVTGGTRILSDWLVVECTANPGETFLDRMIALVEGAQRRKTPNEIALTILLIALTLVF---LLVTATLW 238 (675)
T ss_pred ceeecCCCCcceeecCcEEEeeEEEEEEEEecccCHHHHHHHHHHhcccCCChHHHHHHHHHHHHHHHH---HHHHHHHH
Confidence 999987764 3999999999999999999999999999999999998889999987776654433221 11122222
Q ss_pred HHHHhhccccccccccccchhhHHHHHHHHHHHHhhhhccCCchHHHHHHHHHHHHHHHhhCCCeeecchhhhhcCCeee
Q 044020 159 IGRFLGEKVIHNEFTDWSSADALTLIDYFAVVVTIIDVAVPEGLPLAVTLSLAFAMKKLMNDGALVRHLSACETMGSASC 238 (563)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ili~~~P~~l~~~~~~~~~~~~~~l~~~~i~~k~~~~le~l~~v~~ 238 (563)
.+..+. .....+...+++++++|||+|+...+.....+++++.++|+++|+.+++|.||++|+
T Consensus 239 ~~~~~~-----------------~~~~~~~~lvallV~aiP~aLg~l~~av~iag~~r~ar~gvLvK~~~avE~lg~v~~ 301 (675)
T TIGR01497 239 PFAAYG-----------------GNAISVTVLVALLVCLIPTTIGGLLSAIGIAGMDRVLGFNVIATSGRAVEACGDVDT 301 (675)
T ss_pred HHHHhc-----------------ChhHHHHHHHHHHHHhCchhhhhHHHHHHHHHHHHHHHCCeEeeCcHHHHHhhCCCE
Confidence 111110 001246667889999999999888888777899999999999999999999999999
Q ss_pred eecccccccccCceEEEEEEEcCeeeeecCCCccccccccccHHHHHHHHHHHHhccCCceeecCCCCceecCCccHHHH
Q 044020 239 ICTDKTRMLTTNHMVVDKIWIANTISNVEGNNRKDILQSEISERVLDITLQAIFQNTGSKVVKDKDGKNSILGTPTESAI 318 (563)
Q Consensus 239 i~~DKTGTLT~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~al 318 (563)
+|||||||||+|+|.+.+++..+.. ..++ ++..+..++.. ..||.++|+
T Consensus 302 I~~DKTGTLT~g~~~v~~~~~~~~~---------------~~~~---ll~~aa~~~~~-------------s~hP~a~Ai 350 (675)
T TIGR01497 302 LLLDKTGTITLGNRLASEFIPAQGV---------------DEKT---LADAAQLASLA-------------DDTPEGKSI 350 (675)
T ss_pred EEECCCCcccCCCeEEEEEEecCCC---------------cHHH---HHHHHHHhcCC-------------CCCcHHHHH
Confidence 9999999999999999998753221 0112 22222222221 148999999
Q ss_pred HHHHHHcCCChHHHhhhceEEEEecCCCCceeEEEEEEcCCCeEEEEEeCChhHHHhcccccccCCCccccCCHHHHHHH
Q 044020 319 LEFGLRLGGDFEAQRREFKIVKVEPFNSVRKKMSVLIALPAGGMRAFCKGASEIVLSMCDKVVSDNGEPVPLSEEQFRNI 398 (563)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~sviv~~~~~~~~~~~kG~~~~il~~c~~~~~~~~~~~~~~~~~~~~i 398 (563)
++++++.+.+... ..++..+..||++.++++++.+. ++ ..+.||+++.+++.|.. +|...+ ..+
T Consensus 351 v~~a~~~~~~~~~--~~~~~~~~~pf~~~~~~sg~~~~--~g--~~~~kGa~e~i~~~~~~----~g~~~~------~~~ 414 (675)
T TIGR01497 351 VILAKQLGIREDD--VQSLHATFVEFTAQTRMSGINLD--NG--RMIRKGAVDAIKRHVEA----NGGHIP------TDL 414 (675)
T ss_pred HHHHHHcCCCccc--cccccceEEEEcCCCcEEEEEEe--CC--eEEEECCHHHHHHHHHh----cCCCCc------HHH
Confidence 9999887654322 22345678999999887776543 22 46889999999988852 122211 346
Q ss_pred HHHHHHHHHHHHhHhHhhhhccCCCCCCCCCCCCCceEEEEecccCCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHH
Q 044020 399 TDVINGFASEALRTLCLAFKDLNDSSNENNIPDSGYTLIAVVGIKDPVRPGVKEAVQTCLEAGITVRMVTGDNINTARAI 478 (563)
Q Consensus 399 ~~~~~~~~~~G~r~i~~a~~~l~~~~~~~~~~~~~~~~lG~i~~~d~~~~~~~~~I~~l~~~gi~v~i~TGd~~~~a~~~ 478 (563)
.+.++.++++|.|++++|+ +.+++|+++++|++||+++++|++|+++|++++|+|||+..++.++
T Consensus 415 ~~~~~~~a~~G~r~l~va~---------------~~~~lG~i~l~D~~Rp~a~eaI~~l~~~Gi~v~miTGD~~~ta~~i 479 (675)
T TIGR01497 415 DQAVDQVARQGGTPLVVCE---------------DNRIYGVIYLKDIVKGGIKERFAQLRKMGIKTIMITGDNRLTAAAI 479 (675)
T ss_pred HHHHHHHHhCCCeEEEEEE---------------CCEEEEEEEecccchhHHHHHHHHHHHCCCEEEEEcCCCHHHHHHH
Confidence 6777889999999999995 3489999999999999999999999999999999999999999999
Q ss_pred HHHcCCCCCCCceeechhhhcCCCCCCCcceeEEEecChhhHHHHHHHHHHhcCCEEEEEcCCccCHHHHhhCCceEeec
Q 044020 479 AKECGILTSDGEAVEGPEFRNMSPADIIPKLQVMARSLPSDKHTLVTQLRNTFGEVVAVTGDGTNDASALHEADIGLAMG 558 (563)
Q Consensus 479 a~~lgi~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~~~~g~~v~~iGDg~ND~~~l~~a~vgiamg 558 (563)
|+++|+++ ++++++|++|..+++.+|++ |+.|+|+|||.||.|||++||+|||||
T Consensus 480 A~~lGI~~------------------------v~a~~~PedK~~~v~~lq~~-g~~VamvGDG~NDapAL~~AdvGiAm~ 534 (675)
T TIGR01497 480 AAEAGVDD------------------------FIAEATPEDKIALIRQEQAE-GKLVAMTGDGTNDAPALAQADVGVAMN 534 (675)
T ss_pred HHHcCCCE------------------------EEcCCCHHHHHHHHHHHHHc-CCeEEEECCCcchHHHHHhCCEeEEeC
Confidence 99999986 99999999999999999998 999999999999999999999999999
Q ss_pred CCCCC
Q 044020 559 IAGTE 563 (563)
Q Consensus 559 ~~~~~ 563 (563)
+|++
T Consensus 535 -~gt~ 538 (675)
T TIGR01497 535 -SGTQ 538 (675)
T ss_pred -CCCH
Confidence 8763
|
One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR. |
| >COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-74 Score=613.64 Aligned_cols=438 Identities=29% Similarity=0.367 Sum_probs=357.0
Q ss_pred hhHHHHHHHHHHHHHH----H--hccCeeEEEE-CCEEEEeecCCcccCcEEEeCCCCeeeceEEEEeeCceEEEeccCc
Q 044020 4 AISDYKQSLQFRDLDR----E--KKKIFIQVTR-DGQRQKVCTYDLVVGDIVHLSIGDQVPAYGIFISGHSLLIDESSLS 76 (563)
Q Consensus 4 ~~~~~~~~~~~~~l~~----~--~~~~~~~V~r-~g~~~~i~~~~L~~GDiI~v~~G~~iPaD~~ll~g~~l~Vdes~lT 76 (563)
.+.+|.+.+.+.+..+ . +.+.++++.+ ||++++||+++|++||+|.|+|||+||+||+|++|++ .||||+||
T Consensus 185 ~~G~~LE~~a~~ra~~ai~~L~~l~p~~A~~~~~~~~~~~v~v~~v~~GD~v~VrpGE~IPvDG~V~~G~s-~vDeS~iT 263 (713)
T COG2217 185 LLGRYLEARAKGRARRAIRALLDLAPKTATVVRGDGEEEEVPVEEVQVGDIVLVRPGERIPVDGVVVSGSS-SVDESMLT 263 (713)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHccCCCEEEEEecCCcEEEEEHHHCCCCCEEEECCCCEecCCeEEEeCcE-Eeecchhh
Confidence 3455555555554333 2 3466786766 5658999999999999999999999999999999998 99999999
Q ss_pred CCCCcccccCCCCeEEecceeecCcEEEEEEEEcccchhHHHHHHhccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHH
Q 044020 77 GQSEPRYMYEENPFLLAGTKVQGGSGKMLVTTVGMRTEWGKLMETLNEGGEDETPLQVKLNGVATIIGKIELFFSVLEFL 156 (563)
Q Consensus 77 Ges~p~~k~~~~~~i~~Gt~v~~g~~~~~V~~tg~~t~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 156 (563)
|||.|+.|.+++. |++||.+.+|.+.++|+++|.+|++++|.+++++++.+++|+|+..|+++.+|.|.++++++++|+
T Consensus 264 GEs~PV~k~~Gd~-V~aGtiN~~G~l~i~vt~~~~dt~la~Ii~LVe~Aq~~Ka~iqrlaDr~a~~fvp~vl~ia~l~f~ 342 (713)
T COG2217 264 GESLPVEKKPGDE-VFAGTVNLDGSLTIRVTRVGADTTLARIIRLVEEAQSSKAPIQRLADRVASYFVPVVLVIAALTFA 342 (713)
T ss_pred CCCCCEecCCCCE-EeeeEEECCccEEEEEEecCccCHHHHHHHHHHHHhhCCchHHHHHHHHHHccHHHHHHHHHHHHH
Confidence 9999999998887 999999999999999999999999999999999999999999999999999999999999999888
Q ss_pred HHHHHHhhccccccccccccchhhHHHHHHHHHHHHhhhhccCCchHHHHHHHHHHHHHHHhhCCCeeecchhhhhcCCe
Q 044020 157 VLIGRFLGEKVIHNEFTDWSSADALTLIDYFAVVVTIIDVAVPEGLPLAVTLSLAFAMKKLMNDGALVRHLSACETMGSA 236 (563)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ili~~~P~~l~~~~~~~~~~~~~~l~~~~i~~k~~~~le~l~~v 236 (563)
+|.+..- .++...|..++++|+++|||+|.+++|+++..++.+++++|+++|+.+++|.++++
T Consensus 343 ~w~~~~~-----------------~~~~~a~~~a~avLVIaCPCALgLAtP~ai~~g~g~aA~~GILiK~g~~LE~l~~v 405 (713)
T COG2217 343 LWPLFGG-----------------GDWETALYRALAVLVIACPCALGLATPTAILVGIGRAARRGILIKGGEALERLAKV 405 (713)
T ss_pred HHHHhcC-----------------CcHHHHHHHHHhheeeeCccHHHhHHHHHHHHHHHHHHhCceEEeChHHHHhhccC
Confidence 6643321 13455789999999999999999999999999999999999999999999999999
Q ss_pred eeeecccccccccCceEEEEEEEcCeeeeecCCCccccccccccHHHHHHHHHHHHhccCCceeecCCCCceecCCccHH
Q 044020 237 SCICTDKTRMLTTNHMVVDKIWIANTISNVEGNNRKDILQSEISERVLDITLQAIFQNTGSKVVKDKDGKNSILGTPTES 316 (563)
Q Consensus 237 ~~i~~DKTGTLT~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~ 316 (563)
|+++||||||||+|+|+|.++...+.. .++++.+ +..... .+.||..+
T Consensus 406 ~tvvFDKTGTLT~G~p~v~~v~~~~~~----------------e~~~L~l---aAalE~-------------~S~HPiA~ 453 (713)
T COG2217 406 DTVVFDKTGTLTEGKPEVTDVVALDGD----------------EDELLAL---AAALEQ-------------HSEHPLAK 453 (713)
T ss_pred CEEEEeCCCCCcCCceEEEEEecCCCC----------------HHHHHHH---HHHHHh-------------cCCChHHH
Confidence 999999999999999999998765430 1223332 222222 23499999
Q ss_pred HHHHHHHHcCCChHHHhhhceEEEEecCCCCceeEEEEEEcCCCeEEEEEeCChhHHHhcccccccCCCccccCCHHHHH
Q 044020 317 AILEFGLRLGGDFEAQRREFKIVKVEPFNSVRKKMSVLIALPAGGMRAFCKGASEIVLSMCDKVVSDNGEPVPLSEEQFR 396 (563)
Q Consensus 317 al~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~sviv~~~~~~~~~~~kG~~~~il~~c~~~~~~~~~~~~~~~~~~~ 396 (563)
|+++++...+.... +..+.+| .+ .+.-+.++ ..+.-|++..+.+. +.. .+.
T Consensus 454 AIv~~a~~~~~~~~------~~~~~i~---G~---Gv~~~v~g---~~v~vG~~~~~~~~--------~~~--~~~---- 504 (713)
T COG2217 454 AIVKAAAERGLPDV------EDFEEIP---GR---GVEAEVDG---ERVLVGNARLLGEE--------GID--LPL---- 504 (713)
T ss_pred HHHHHHHhcCCCCc------cceeeec---cC---cEEEEECC---EEEEEcCHHHHhhc--------CCC--ccc----
Confidence 99998887652110 0111111 11 11111111 23334666655321 111 111
Q ss_pred HHHHHHHHHHHHHHhHhHhhhhccCCCCCCCCCCCCCceEEEEecccCCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHH
Q 044020 397 NITDVINGFASEALRTLCLAFKDLNDSSNENNIPDSGYTLIAVVGIKDPVRPGVKEAVQTCLEAGITVRMVTGDNINTAR 476 (563)
Q Consensus 397 ~i~~~~~~~~~~G~r~i~~a~~~l~~~~~~~~~~~~~~~~lG~i~~~d~~~~~~~~~I~~l~~~gi~v~i~TGd~~~~a~ 476 (563)
..+....+.++|..++.++ .|.+++|+|.+.|++|++++++|++||+.|++++|+|||+..+|+
T Consensus 505 -~~~~~~~~~~~G~t~v~va---------------~dg~~~g~i~~~D~~R~~a~~aI~~L~~~Gi~~~mLTGDn~~~A~ 568 (713)
T COG2217 505 -LSERIEALESEGKTVVFVA---------------VDGKLVGVIALADELRPDAKEAIAALKALGIKVVMLTGDNRRTAE 568 (713)
T ss_pred -hhhhHHHHHhcCCeEEEEE---------------ECCEEEEEEEEeCCCChhHHHHHHHHHHCCCeEEEEcCCCHHHHH
Confidence 3455667777888777666 455999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCCCCCCceeechhhhcCCCCCCCcceeEEEecChhhHHHHHHHHHHhcCCEEEEEcCCccCHHHHhhCCceEe
Q 044020 477 AIAKECGILTSDGEAVEGPEFRNMSPADIIPKLQVMARSLPSDKHTLVTQLRNTFGEVVAVTGDGTNDASALHEADIGLA 556 (563)
Q Consensus 477 ~~a~~lgi~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~~~~g~~v~~iGDg~ND~~~l~~a~vgia 556 (563)
.+|+++||+. +++++.|++|.+.|+.||++ |+.|+|+|||.||.|+|.+||||||
T Consensus 569 ~iA~~lGId~------------------------v~AellPedK~~~V~~l~~~-g~~VamVGDGINDAPALA~AdVGiA 623 (713)
T COG2217 569 AIAKELGIDE------------------------VRAELLPEDKAEIVRELQAE-GRKVAMVGDGINDAPALAAADVGIA 623 (713)
T ss_pred HHHHHcChHh------------------------heccCCcHHHHHHHHHHHhc-CCEEEEEeCCchhHHHHhhcCeeEe
Confidence 9999999987 99999999999999999998 9999999999999999999999999
Q ss_pred ecCCCCC
Q 044020 557 MGIAGTE 563 (563)
Q Consensus 557 mg~~~~~ 563 (563)
|| .|+|
T Consensus 624 mG-~GtD 629 (713)
T COG2217 624 MG-SGTD 629 (713)
T ss_pred ec-CCcH
Confidence 99 7875
|
|
| >KOG0208 consensus Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-73 Score=591.82 Aligned_cols=515 Identities=25% Similarity=0.364 Sum_probs=388.4
Q ss_pred HHHHHHHHHHHHHHhc-cCeeEEEECCEEEEeecCCcccCcEEEeCC-CCeeeceEEEEeeCceEEEeccCcCCCCcccc
Q 044020 7 DYKQSLQFRDLDREKK-KIFIQVTRDGQRQKVCTYDLVVGDIVHLSI-GDQVPAYGIFISGHSLLIDESSLSGQSEPRYM 84 (563)
Q Consensus 7 ~~~~~~~~~~l~~~~~-~~~~~V~r~g~~~~i~~~~L~~GDiI~v~~-G~~iPaD~~ll~g~~l~Vdes~lTGes~p~~k 84 (563)
-|...++...+.+... ...|+|+|||.|+.|.++|||||||+.+.+ |-..|||+++++|++ .||||+|||||.|+.|
T Consensus 232 v~e~r~qs~rlr~mv~~~~~V~V~R~g~~~ti~S~eLVPGDil~i~~~~~~~PcDa~Li~g~c-ivNEsmLTGESVPv~K 310 (1140)
T KOG0208|consen 232 VYETRKQSIRLRSMVKFTCPVTVIRDGFWETVDSSELVPGDILYIPPPGKIMPCDALLISGDC-IVNESMLTGESVPVTK 310 (1140)
T ss_pred HHHHHHHHHHHHHHhcCCceEEEEECCEEEEEeccccccccEEEECCCCeEeecceEEEeCcE-EeecccccCCcccccc
Confidence 3444444445555443 347999999999999999999999999999 999999999999976 8999999999999999
Q ss_pred cC------------------CCCeEEecceee------cCcEEEEEEEEcccchhHHHHHHhccCCCCCCchHHHHHHHH
Q 044020 85 YE------------------ENPFLLAGTKVQ------GGSGKMLVTTVGMRTEWGKLMETLNEGGEDETPLQVKLNGVA 140 (563)
Q Consensus 85 ~~------------------~~~~i~~Gt~v~------~g~~~~~V~~tg~~t~~~~i~~~~~~~~~~~~~~~~~~~~~~ 140 (563)
.+ ..+.+|+||+++ ++++.++|++||.+|..|++.+++...+ +.+++-..|.+.
T Consensus 311 ~~l~~~~~~~~~~~~~~~~~~rh~lfcGT~vlq~r~~~g~~v~a~V~RTGF~T~KGqLVRsilyPk--P~~fkfyrds~~ 388 (1140)
T KOG0208|consen 311 TPLPMGTDSLDSITISMSTNSRHTLFCGTKVLQARAYLGGPVLAMVLRTGFSTTKGQLVRSILYPK--PVNFKFYRDSFK 388 (1140)
T ss_pred cCCccccccCcCeeechhhcCcceeeccceEEEeecCCCCceEEEEEeccccccccHHHHhhcCCC--CcccHHHHHHHH
Confidence 62 345799999998 4789999999999999999999998854 344443333322
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccccccccccccchhhHHHHHHHHHHHHhhhhccCCchHHHHHHHHHHHHHHHhhC
Q 044020 141 TIIGKIELFFSVLEFLVLIGRFLGEKVIHNEFTDWSSADALTLIDYFAVVVTIIDVAVPEGLPLAVTLSLAFAMKKLMND 220 (563)
Q Consensus 141 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ili~~~P~~l~~~~~~~~~~~~~~l~~~ 220 (563)
++....+++++.|+..+..+... ...+...++.++.++.+.+|+|||.+.++...++.+||.|+
T Consensus 389 --fi~~l~~ia~~gfiy~~i~l~~~--------------g~~~~~iiirsLDliTi~VPPALPAaltvG~~~a~~RLkkk 452 (1140)
T KOG0208|consen 389 --FILFLVIIALIGFIYTAIVLNLL--------------GVPLKTIIIRSLDLITIVVPPALPAALTVGIIYAQSRLKKK 452 (1140)
T ss_pred --HHHHHHHHHHHHHHHHhHhHHHc--------------CCCHHHHhhhhhcEEEEecCCCchhhhhHHHHHHHHHHHhc
Confidence 22222223333333322222111 12455668889999999999999999999999999999999
Q ss_pred CCeeecchhhhhcCCeeeeecccccccccCceEEEEEEEcCeeeeecC---CCcccc------ccccccHHHHHHHHHHH
Q 044020 221 GALVRHLSACETMGSASCICTDKTRMLTTNHMVVDKIWIANTISNVEG---NNRKDI------LQSEISERVLDITLQAI 291 (563)
Q Consensus 221 ~i~~k~~~~le~l~~v~~i~~DKTGTLT~~~~~v~~i~~~~~~~~~~~---~~~~~~------~~~~~~~~~~~~~~~~~ 291 (563)
||++-+|..+...|++|++|||||||||++.+.+..+........... ...... +....+......+..++
T Consensus 453 ~IfCisP~rIn~~G~i~~~cFDKTGTLTEdGLDl~gv~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~a~ 532 (1140)
T KOG0208|consen 453 GIFCISPQRINLCGKLNLVCFDKTGTLTEDGLDLWGVVPVERNVDDGPELKVVTEDSLQLFYKLSLRSSSLPMGNLVAAM 532 (1140)
T ss_pred CeEEcCccceeecceeeEEEEcCCCcccccceeEEEEEeccccccccchhhhhhhhhccceeeccccccCCchHHHHHHH
Confidence 999999999999999999999999999999999988776432210000 000000 00000111234556666
Q ss_pred HhccCCceeecCCCCceecCCccHHHHHHHHHHcCC----Ch---------------------HHHh----hhceEEEEe
Q 044020 292 FQNTGSKVVKDKDGKNSILGTPTESAILEFGLRLGG----DF---------------------EAQR----REFKIVKVE 342 (563)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~e~al~~~~~~~~~----~~---------------------~~~~----~~~~~~~~~ 342 (563)
..||+...+. ....|+|.|..+.+.....-. +. +... ..+.+++.+
T Consensus 533 atCHSL~~v~-----g~l~GDPLdlkmfe~t~w~~ee~~~~~~~~~~~~~~~p~v~~p~~~~~~~~t~~~~~~~si~k~f 607 (1140)
T KOG0208|consen 533 ATCHSLTLVD-----GTLVGDPLDLKMFESTGWVYEEADIEDEATREFNTLIPTVVRPPENAFNQSTECGEGEISIVKQF 607 (1140)
T ss_pred hhhceeEEeC-----CeeccCceeeeeeeccceEEEeccccchhhhhhCCccCCEeCCCcccccCCCcCCCcceEEEEec
Confidence 7777554432 245677777665553221100 00 0001 158899999
Q ss_pred cCCCCceeEEEEEEcCC-CeEEEEEeCChhHHHhcccccccCCCccccCCHHHHHHHHHHHHHHHHHHHhHhHhhhhccC
Q 044020 343 PFNSVRKKMSVLIALPA-GGMRAFCKGASEIVLSMCDKVVSDNGEPVPLSEEQFRNITDVINGFASEALRTLCLAFKDLN 421 (563)
Q Consensus 343 ~f~~~~~~~sviv~~~~-~~~~~~~kG~~~~il~~c~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~G~r~i~~a~~~l~ 421 (563)
||+|.-+||||++..++ ..+.+|+||+||.|.+.|.. +.+ ...+++.++.|+.+|+|++|+|+|+++
T Consensus 608 eF~S~LrRMSVIv~~~~e~~~~~ftKGaPE~I~~ic~p------~tv------P~dy~evl~~Yt~~GfRVIAlA~K~L~ 675 (1140)
T KOG0208|consen 608 EFSSALRRMSVIVSTGGEDKMMVFTKGAPESIAEICKP------ETV------PADYQEVLKEYTHQGFRVIALASKELE 675 (1140)
T ss_pred ccchhhheEEEEEecCCCCceEeeccCCHHHHHHhcCc------ccC------CccHHHHHHHHHhCCeEEEEEecCccC
Confidence 99999999999999864 67899999999999999974 222 356788999999999999999999999
Q ss_pred CCC------CCCCCCCCCceEEEEecccCCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCcee---
Q 044020 422 DSS------NENNIPDSGYTLIAVVGIKDPVRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAKECGILTSDGEAV--- 492 (563)
Q Consensus 422 ~~~------~~~~~~~~~~~~lG~i~~~d~~~~~~~~~I~~l~~~gi~v~i~TGd~~~~a~~~a~~lgi~~~~~~~~--- 492 (563)
... -.+..+|.|++|+|+|.|++++++.++..|++|.+++|+++|+|||+..+|..+||+||+..+...++
T Consensus 676 ~~~~~~~~~~~Rd~vEs~l~FlGLiVmeNkLK~~T~~VI~eL~~AnIRtVMcTGDNllTaisVakeCgmi~p~~~v~~~~ 755 (1140)
T KOG0208|consen 676 TSTLQKAQKLSRDTVESNLEFLGLIVMENKLKEETKRVIDELNRANIRTVMCTGDNLLTAISVAKECGMIEPQVKVIIPE 755 (1140)
T ss_pred cchHHHHhhccHhhhhccceeeEEEEeecccccccHHHHHHHHhhcceEEEEcCCchheeeehhhcccccCCCCeEEEEe
Confidence 873 24468899999999999999999999999999999999999999999999999999999987532211
Q ss_pred ----------------------------------------------------echhhhcCCCC------CCCcceeEEEe
Q 044020 493 ----------------------------------------------------EGPEFRNMSPA------DIIPKLQVMAR 514 (563)
Q Consensus 493 ----------------------------------------------------~g~~~~~~~~~------~~~~~~~v~~~ 514 (563)
+|+.+.-+... .++.+-.||||
T Consensus 756 ~~~~~~~~~~~i~w~~ve~~~~~~~~~~~~~~~~~~~~~~d~~~~~~yhlA~sG~~f~~i~~~~~~l~~~Il~~~~VfAR 835 (1140)
T KOG0208|consen 756 LEPPEDDSIAQIVWLCVESQTQFLDPKEPDPDLASVKLSLDVLSEKDYHLAMSGKTFQVILEHFPELVPKILLKGTVFAR 835 (1140)
T ss_pred ccCCccCCCceeEEEEccCccccCCCCccCccccCCccChhhhccceeEEEecCchhHHHHhhcHHHHHHHHhcCeEEee
Confidence 11111111100 22334469999
Q ss_pred cChhhHHHHHHHHHHhcCCEEEEEcCCccCHHHHhhCCceEeec
Q 044020 515 SLPSDKHTLVTQLRNTFGEVVAVTGDGTNDASALHEADIGLAMG 558 (563)
Q Consensus 515 ~~p~~K~~~v~~l~~~~g~~v~~iGDg~ND~~~l~~a~vgiamg 558 (563)
|+|.||.++++.||+. |+.|+|+|||.||+.||++||+||+.+
T Consensus 836 MsP~qK~~Lie~lQkl-~y~VgfCGDGANDCgALKaAdvGISLS 878 (1140)
T KOG0208|consen 836 MSPDQKAELIEALQKL-GYKVGFCGDGANDCGALKAADVGISLS 878 (1140)
T ss_pred cCchhHHHHHHHHHhc-CcEEEecCCCcchhhhhhhcccCcchh
Confidence 9999999999999997 999999999999999999999999987
|
|
| >PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-69 Score=592.64 Aligned_cols=416 Identities=25% Similarity=0.316 Sum_probs=348.4
Q ss_pred hccCeeEEEECCEEEEeecCCcccCcEEEeCCCCeeeceEEEEeeCceEEEeccCcCCCCcccccCCCCeEEecceeecC
Q 044020 21 KKKIFIQVTRDGQRQKVCTYDLVVGDIVHLSIGDQVPAYGIFISGHSLLIDESSLSGQSEPRYMYEENPFLLAGTKVQGG 100 (563)
Q Consensus 21 ~~~~~~~V~r~g~~~~i~~~~L~~GDiI~v~~G~~iPaD~~ll~g~~l~Vdes~lTGes~p~~k~~~~~~i~~Gt~v~~g 100 (563)
+.+.+++|+|||+++.|++++|+|||+|+|++||+|||||+|++|+. .||||+|||||.|+.|..++. ||+||.+.+|
T Consensus 240 l~p~~a~vir~g~~~~v~~~~l~~GDiv~v~~G~~IP~Dg~vi~g~~-~vdes~lTGEs~Pv~k~~Gd~-V~aGt~~~~G 317 (741)
T PRK11033 240 LVPETATRLRDGEREEVAIADLRPGDVIEVAAGGRLPADGKLLSPFA-SFDESALTGESIPVERATGEK-VPAGATSVDR 317 (741)
T ss_pred CCCCEEEEEECCEEEEEEHHHCCCCCEEEECCCCEEecceEEEECcE-EeecccccCCCCCEecCCCCe-eccCCEEcCc
Confidence 34668999999999999999999999999999999999999999986 999999999999999987765 9999999999
Q ss_pred cEEEEEEEEcccchhHHHHHHhccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccchhh
Q 044020 101 SGKMLVTTVGMRTEWGKLMETLNEGGEDETPLQVKLNGVATIIGKIELFFSVLEFLVLIGRFLGEKVIHNEFTDWSSADA 180 (563)
Q Consensus 101 ~~~~~V~~tg~~t~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (563)
.+.++|+++|.+|.++++.+.+++++.+++|+++.+++++.++.++++.++++++++|.+++.
T Consensus 318 ~~~i~V~~~g~~s~l~~I~~lv~~a~~~k~~~q~~~d~~a~~~~~~v~~~a~~~~~~~~~~~~----------------- 380 (741)
T PRK11033 318 LVTLEVLSEPGASAIDRILHLIEEAEERRAPIERFIDRFSRIYTPAIMLVALLVILVPPLLFA----------------- 380 (741)
T ss_pred eEEEEEEeccccCHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc-----------------
Confidence 999999999999999999999999999999999999999999999999999998887643321
Q ss_pred HHHHHHHHHHHHhhhhccCCchHHHHHHHHHHHHHHHhhCCCeeecchhhhhcCCeeeeecccccccccCceEEEEEEEc
Q 044020 181 LTLIDYFAVVVTIIDVAVPEGLPLAVTLSLAFAMKKLMNDGALVRHLSACETMGSASCICTDKTRMLTTNHMVVDKIWIA 260 (563)
Q Consensus 181 ~~~~~~~~~~i~ili~~~P~~l~~~~~~~~~~~~~~l~~~~i~~k~~~~le~l~~v~~i~~DKTGTLT~~~~~v~~i~~~ 260 (563)
..+...+..++++|+++|||+|.+++|+++..+..+++|+|+++|+++++|.|+++|++|||||||||+|+|+|.+++..
T Consensus 381 ~~~~~~i~~a~svlviacPcaL~latP~a~~~~l~~aar~gilik~~~alE~l~~v~~v~fDKTGTLT~g~~~v~~~~~~ 460 (741)
T PRK11033 381 APWQEWIYRGLTLLLIGCPCALVISTPAAITSGLAAAARRGALIKGGAALEQLGRVTTVAFDKTGTLTEGKPQVTDIHPA 460 (741)
T ss_pred CCHHHHHHHHHHHHHHhchhhhhhhhHHHHHHHHHHHHHCCeEEcCcHHHHHhhCCCEEEEeCCCCCcCCceEEEEEEec
Confidence 02334577789999999999999999999999999999999999999999999999999999999999999999998654
Q ss_pred CeeeeecCCCccccccccccHHHHHHHHHHHHhccCCceeecCCCCceecCCccHHHHHHHHHHcCCChHHHhhhceEEE
Q 044020 261 NTISNVEGNNRKDILQSEISERVLDITLQAIFQNTGSKVVKDKDGKNSILGTPTESAILEFGLRLGGDFEAQRREFKIVK 340 (563)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~al~~~~~~~~~~~~~~~~~~~~~~ 340 (563)
+.. ..++++.+. ...+ ..+.||.++|+++++++.+.+
T Consensus 461 ~~~---------------~~~~~l~~a---a~~e-------------~~s~hPia~Ai~~~a~~~~~~------------ 497 (741)
T PRK11033 461 TGI---------------SESELLALA---AAVE-------------QGSTHPLAQAIVREAQVRGLA------------ 497 (741)
T ss_pred CCC---------------CHHHHHHHH---HHHh-------------cCCCCHHHHHHHHHHHhcCCC------------
Confidence 321 012222222 1111 123599999999998766532
Q ss_pred EecCCCCceeEE---EEEEcCCCeEEEEEeCChhHHHhcccccccCCCccccCCHHHHHHHHHHHHHHHHHHHhHhHhhh
Q 044020 341 VEPFNSVRKKMS---VLIALPAGGMRAFCKGASEIVLSMCDKVVSDNGEPVPLSEEQFRNITDVINGFASEALRTLCLAF 417 (563)
Q Consensus 341 ~~~f~~~~~~~s---viv~~~~~~~~~~~kG~~~~il~~c~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~G~r~i~~a~ 417 (563)
+||.++++.+. +....++.. +.-|+++.+.+ ++ +.+...++.+..+|++++++|+
T Consensus 498 -~~~~~~~~~~~g~Gv~~~~~g~~---~~ig~~~~~~~--------------~~----~~~~~~~~~~~~~g~~~v~va~ 555 (741)
T PRK11033 498 -IPEAESQRALAGSGIEGQVNGER---VLICAPGKLPP--------------LA----DAFAGQINELESAGKTVVLVLR 555 (741)
T ss_pred -CCCCcceEEEeeEEEEEEECCEE---EEEecchhhhh--------------cc----HHHHHHHHHHHhCCCEEEEEEE
Confidence 45655555542 111112222 22366665521 12 2234456678899999999984
Q ss_pred hccCCCCCCCCCCCCCceEEEEecccCCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCceeechhh
Q 044020 418 KDLNDSSNENNIPDSGYTLIAVVGIKDPVRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAKECGILTSDGEAVEGPEF 497 (563)
Q Consensus 418 ~~l~~~~~~~~~~~~~~~~lG~i~~~d~~~~~~~~~I~~l~~~gi~v~i~TGd~~~~a~~~a~~lgi~~~~~~~~~g~~~ 497 (563)
|.+++|++.|+|++|++++++|++|+++|++++|+|||+..++..+|+++||.
T Consensus 556 ---------------~~~~~g~i~l~d~~r~~a~~~i~~L~~~gi~~~llTGd~~~~a~~ia~~lgi~------------ 608 (741)
T PRK11033 556 ---------------NDDVLGLIALQDTLRADARQAISELKALGIKGVMLTGDNPRAAAAIAGELGID------------ 608 (741)
T ss_pred ---------------CCEEEEEEEEecCCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCC------------
Confidence 45999999999999999999999999999999999999999999999999996
Q ss_pred hcCCCCCCCcceeEEEecChhhHHHHHHHHHHhcCCEEEEEcCCccCHHHHhhCCceEeecCCCCC
Q 044020 498 RNMSPADIIPKLQVMARSLPSDKHTLVTQLRNTFGEVVAVTGDGTNDASALHEADIGLAMGIAGTE 563 (563)
Q Consensus 498 ~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~~~~g~~v~~iGDg~ND~~~l~~a~vgiamg~~~~~ 563 (563)
++++..|++|..+++.+++. +.|+|+|||.||.|||+.||+||||| +|++
T Consensus 609 -------------~~~~~~p~~K~~~v~~l~~~--~~v~mvGDgiNDapAl~~A~vgia~g-~~~~ 658 (741)
T PRK11033 609 -------------FRAGLLPEDKVKAVTELNQH--APLAMVGDGINDAPAMKAASIGIAMG-SGTD 658 (741)
T ss_pred -------------eecCCCHHHHHHHHHHHhcC--CCEEEEECCHHhHHHHHhCCeeEEec-CCCH
Confidence 77889999999999999964 68999999999999999999999999 7763
|
|
| >KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.3e-71 Score=573.35 Aligned_cols=459 Identities=25% Similarity=0.313 Sum_probs=374.7
Q ss_pred chhhHHHHHHHHHHHHHHH------hccCeeEEEECCE-EEEeecCCcccCcEEEeCCCCeeeceEEEEeeCceEEEecc
Q 044020 2 VTAISDYKQSLQFRDLDRE------KKKIFIQVTRDGQ-RQKVCTYDLVVGDIVHLSIGDQVPAYGIFISGHSLLIDESS 74 (563)
Q Consensus 2 ~~~~~~~~~~~~~~~l~~~------~~~~~~~V~r~g~-~~~i~~~~L~~GDiI~v~~G~~iPaD~~ll~g~~l~Vdes~ 74 (563)
|-++.+|.+.+.+.+.... +.+.++.+..+|. .++|+.+.|++||+|+|.||++||+||+|++|++ +||||+
T Consensus 350 fi~lgr~LE~~Ak~kts~alskLmsl~p~~a~ii~~g~~e~eI~v~lvq~gdivkV~pG~kiPvDG~Vv~Gss-~VDEs~ 428 (951)
T KOG0207|consen 350 FITLGRWLESLAKGKTSEALSKLMSLAPSKATIIEDGSEEKEIPVDLVQVGDIVKVKPGEKIPVDGVVVDGSS-EVDESL 428 (951)
T ss_pred HHHHHHHHHHHhhccchHHHHHHhhcCcccceEeecCCcceEeeeeeeccCCEEEECCCCccccccEEEeCce-eechhh
Confidence 3457788888877765543 3456788888886 8899999999999999999999999999999997 999999
Q ss_pred CcCCCCcccccCCCCeEEecceeecCcEEEEEEEEcccchhHHHHHHhccCCCCCCchHHHHHHHHHHHHHHHHHHHHHH
Q 044020 75 LSGQSEPRYMYEENPFLLAGTKVQGGSGKMLVTTVGMRTEWGKLMETLNEGGEDETPLQVKLNGVATIIGKIELFFSVLE 154 (563)
Q Consensus 75 lTGes~p~~k~~~~~~i~~Gt~v~~g~~~~~V~~tg~~t~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 154 (563)
+|||+.|+.|+.+.. |.+||++.+|.+.++++++|.+|.+++|.+++++++..+.|+|+.+|+++.+|.|.++++++.+
T Consensus 429 iTGEs~PV~Kk~gs~-ViaGsiN~nG~l~VkaT~~g~dttla~IvkLVEEAQ~sKapiQq~aDkia~yFvP~Vi~lS~~t 507 (951)
T KOG0207|consen 429 ITGESMPVPKKKGST-VIAGSINLNGTLLVKATKVGGDTTLAQIVKLVEEAQLSKAPIQQLADKIAGYFVPVVIVLSLAT 507 (951)
T ss_pred ccCCceecccCCCCe-eeeeeecCCceEEEEEEeccccchHHHHHHHHHHHHcccchHHHHHHHhhhcCCchhhHHHHHH
Confidence 999999999987776 9999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhccccccccccccchhhHHHHHHHHHHHHhhhhccCCchHHHHHHHHHHHHHHHhhCCCeeecchhhhhcC
Q 044020 155 FLVLIGRFLGEKVIHNEFTDWSSADALTLIDYFAVVVTIIDVAVPEGLPLAVTLSLAFAMKKLMNDGALVRHLSACETMG 234 (563)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ili~~~P~~l~~~~~~~~~~~~~~l~~~~i~~k~~~~le~l~ 234 (563)
|++|++..... +..... ....+..+|+.++++++++|||+|.+++|++...+....+++|+++|..+.||.+.
T Consensus 508 ~~~w~~~g~~~---~~~~~~----~~~~~~~a~~~aisVlviACPCaLgLATPtAvmvatgvgA~nGvLIKGge~LE~~h 580 (951)
T KOG0207|consen 508 FVVWILIGKIV---FKYPRS----FFDAFSHAFQLAISVLVIACPCALGLATPTAVMVATGVGATNGVLIKGGEALEKAH 580 (951)
T ss_pred HHHHHHHcccc---ccCcch----hhHHHHHHHHhhheEEEEECchhhhcCCceEEEEEechhhhcceEEcCcHHHHHHh
Confidence 99998655421 111111 22567889999999999999999999999999999999999999999999999999
Q ss_pred CeeeeecccccccccCceEEEEEEEcCeeeeecCCCccccccccccHHHHHHHHHHHHhccCCceeecCCCCceecCCcc
Q 044020 235 SASCICTDKTRMLTTNHMVVDKIWIANTISNVEGNNRKDILQSEISERVLDITLQAIFQNTGSKVVKDKDGKNSILGTPT 314 (563)
Q Consensus 235 ~v~~i~~DKTGTLT~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (563)
++++|+||||||||+|+|.|.++....+. .+.+-...+..+.. ..+.||+
T Consensus 581 kv~tVvFDKTGTLT~G~~~V~~~~~~~~~---------------~~~~e~l~~v~a~E---------------s~SeHPi 630 (951)
T KOG0207|consen 581 KVKTVVFDKTGTLTEGKPTVVDFKSLSNP---------------ISLKEALALVAAME---------------SGSEHPI 630 (951)
T ss_pred cCCEEEEcCCCceecceEEEEEEEecCCc---------------ccHHHHHHHHHHHh---------------cCCcCch
Confidence 99999999999999999999998776653 01111111222222 2234999
Q ss_pred HHHHHHHHHHcCCChHHHhhhceEEEEecCCCCceeEEEEEEcCCCeEEEEEeCChhHHHhcccccccCCCccccCCHHH
Q 044020 315 ESAILEFGLRLGGDFEAQRREFKIVKVEPFNSVRKKMSVLIALPAGGMRAFCKGASEIVLSMCDKVVSDNGEPVPLSEEQ 394 (563)
Q Consensus 315 e~al~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~sviv~~~~~~~~~~~kG~~~~il~~c~~~~~~~~~~~~~~~~~ 394 (563)
.+|+.+|+++...... .-.......|..+... +-+...++. ..-|+-+.+... |...+
T Consensus 631 g~AIv~yak~~~~~~~----~~~~~~~~~~pg~g~~--~~~~~~~~~---i~iGN~~~~~r~--------~~~~~----- 688 (951)
T KOG0207|consen 631 GKAIVDYAKEKLVEPN----PEGVLSFEYFPGEGIY--VTVTVDGNE---VLIGNKEWMSRN--------GCSIP----- 688 (951)
T ss_pred HHHHHHHHHhcccccC----ccccceeecccCCCcc--cceEEeeeE---EeechHHHHHhc--------CCCCc-----
Confidence 9999999987661110 1111122222222211 112222222 344766665432 22211
Q ss_pred HHHHHHHHHHHHHHHHhHhHhhhhccCCCCCCCCCCCCCceEEEEecccCCCCcchHHHHHHHHhCCCeEEEEcCCCHHH
Q 044020 395 FRNITDVINGFASEALRTLCLAFKDLNDSSNENNIPDSGYTLIAVVGIKDPVRPGVKEAVQTCLEAGITVRMVTGDNINT 474 (563)
Q Consensus 395 ~~~i~~~~~~~~~~G~r~i~~a~~~l~~~~~~~~~~~~~~~~lG~i~~~d~~~~~~~~~I~~l~~~gi~v~i~TGd~~~~ 474 (563)
+.++...+.....|+.+.+++ .|.++.|++.++|++|+++..+|..|++.|++++|+|||+..+
T Consensus 689 -~~i~~~~~~~e~~g~tvv~v~---------------vn~~l~gv~~l~D~vr~~a~~av~~Lk~~Gi~v~mLTGDn~~a 752 (951)
T KOG0207|consen 689 -DDILDALTESERKGQTVVYVA---------------VNGQLVGVFALEDQVRPDAALAVAELKSMGIKVVMLTGDNDAA 752 (951)
T ss_pred -hhHHHhhhhHhhcCceEEEEE---------------ECCEEEEEEEeccccchhHHHHHHHHHhcCceEEEEcCCCHHH
Confidence 236677777788899888887 4559999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCCCCceeechhhhcCCCCCCCcceeEEEecChhhHHHHHHHHHHhcCCEEEEEcCCccCHHHHhhCCce
Q 044020 475 ARAIAKECGILTSDGEAVEGPEFRNMSPADIIPKLQVMARSLPSDKHTLVTQLRNTFGEVVAVTGDGTNDASALHEADIG 554 (563)
Q Consensus 475 a~~~a~~lgi~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~~~~g~~v~~iGDg~ND~~~l~~a~vg 554 (563)
|.++|+++|++. ||+++.|+||.++++.+|+. +..|+|+|||.||.|+|.+||+|
T Consensus 753 A~svA~~VGi~~------------------------V~aev~P~~K~~~Ik~lq~~-~~~VaMVGDGINDaPALA~AdVG 807 (951)
T KOG0207|consen 753 ARSVAQQVGIDN------------------------VYAEVLPEQKAEKIKEIQKN-GGPVAMVGDGINDAPALAQADVG 807 (951)
T ss_pred HHHHHHhhCcce------------------------EEeccCchhhHHHHHHHHhc-CCcEEEEeCCCCccHHHHhhccc
Confidence 999999999886 99999999999999999998 99999999999999999999999
Q ss_pred EeecCCCCC
Q 044020 555 LAMGIAGTE 563 (563)
Q Consensus 555 iamg~~~~~ 563 (563)
|||| .|++
T Consensus 808 Iaig-~gs~ 815 (951)
T KOG0207|consen 808 IAIG-AGSD 815 (951)
T ss_pred eeec-cccH
Confidence 9999 7764
|
|
| >TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-68 Score=568.17 Aligned_cols=418 Identities=38% Similarity=0.572 Sum_probs=361.0
Q ss_pred hhhHHHHHHHHHHHHHH-HhccCeeEEEECCEEEEeecCCcccCcEEEeCCCCeeeceEEEEeeCceEEEeccCcCCCCc
Q 044020 3 TAISDYKQSLQFRDLDR-EKKKIFIQVTRDGQRQKVCTYDLVVGDIVHLSIGDQVPAYGIFISGHSLLIDESSLSGQSEP 81 (563)
Q Consensus 3 ~~~~~~~~~~~~~~l~~-~~~~~~~~V~r~g~~~~i~~~~L~~GDiI~v~~G~~iPaD~~ll~g~~l~Vdes~lTGes~p 81 (563)
+...+++.++..+++.+ ..++.+++|+|+| ++.|++++|+|||+|.+++||+|||||+|++|.+ .||||+|||||.|
T Consensus 13 ~~~~~~~~~~~~~~l~~~~~~~~~~~v~r~g-~~~V~~~~l~~GDiv~v~~G~~iP~Dg~vl~g~~-~vdes~LTGEs~p 90 (499)
T TIGR01494 13 EVAAKRAAEDAIRSLKDLLVNPETVTVLRNG-WKEIPASDLVPGDIVLVKSGEIVPADGVLLSGSC-FVDESNLTGESVP 90 (499)
T ss_pred HHHHHHHHHHHHHHHhhccCCCCeEEEEECC-eEEEEHHHCCCCCEEEECCCCEeeeeEEEEEccE-EEEcccccCCCCC
Confidence 44555555556666555 2567789999999 9999999999999999999999999999999965 9999999999999
Q ss_pred ccccCCCCeEEecceeecCcEEEEEEEEcccchhHHHHHHhccCCCCCCchHHHHHHHH-HHHHHHHHHHHHHHHHHHHH
Q 044020 82 RYMYEENPFLLAGTKVQGGSGKMLVTTVGMRTEWGKLMETLNEGGEDETPLQVKLNGVA-TIIGKIELFFSVLEFLVLIG 160 (563)
Q Consensus 82 ~~k~~~~~~i~~Gt~v~~g~~~~~V~~tg~~t~~~~i~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~~~ 160 (563)
+.|.+++. +++|+.+.+|++.+.|+++|.+|..+++...+..+...++++++..++++ .++.++.++++++++++|+.
T Consensus 91 v~k~~g~~-v~~gs~~~~G~~~~~v~~~~~~s~~~~i~~~v~~~~~~k~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~ 169 (499)
T TIGR01494 91 VLKTAGDA-VFAGTYVFNGTLIVVVSATGPNTFGGKIAVVVYTGFETKTPLQPKLDRLSDIIFILFVLLIALAVFLFWAI 169 (499)
T ss_pred eeeccCCc-cccCcEEeccEEEEEEEEeccccHHHHHHHHHHhcCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99988776 99999999999999999999999999999999887777899999999999 78877777777776666543
Q ss_pred HHhhccccccccccccchhhHHHHHHHHHHHHhhhhccCCchHHHHHHHHHHHHHHHhhCCCeeecchhhhhcCCeeeee
Q 044020 161 RFLGEKVIHNEFTDWSSADALTLIDYFAVVVTIIDVAVPEGLPLAVTLSLAFAMKKLMNDGALVRHLSACETMGSASCIC 240 (563)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ili~~~P~~l~~~~~~~~~~~~~~l~~~~i~~k~~~~le~l~~v~~i~ 240 (563)
.+... ..+...+..++++++++|||+|++++|+++..+..+++++|+++|+++++|.||++|++|
T Consensus 170 ~~~~~---------------~~~~~~~~~~~~vl~~~~P~aL~~~~~~~~~~~~~~~~~~gilvk~~~~lE~l~~v~~i~ 234 (499)
T TIGR01494 170 GLWDP---------------NSIFKIFLRALILLVIAIPIALPLAVTIALAVGDARLAKKGIVVRSLNALEELGKVDYIC 234 (499)
T ss_pred HHccc---------------ccHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHCCcEEechhhhhhccCCcEEE
Confidence 21100 024567889999999999999999999999999999999999999999999999999999
Q ss_pred cccccccccCceEEEEEEEcCeeeeecCCCccccccccccHHHHHHHHHHHHhccCCceeecCCCCceecCCccHHHHHH
Q 044020 241 TDKTRMLTTNHMVVDKIWIANTISNVEGNNRKDILQSEISERVLDITLQAIFQNTGSKVVKDKDGKNSILGTPTESAILE 320 (563)
Q Consensus 241 ~DKTGTLT~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~al~~ 320 (563)
||||||||+|+|+|.+++..+. ++.++||.+.|+++
T Consensus 235 fDKTGTLT~~~~~v~~~~~~~~--------------------------------------------~~~s~hp~~~ai~~ 270 (499)
T TIGR01494 235 SDKTGTLTKNEMSFKKVSVLGG--------------------------------------------EYLSGHPDERALVK 270 (499)
T ss_pred eeCCCccccCceEEEEEEecCC--------------------------------------------CcCCCChHHHHHHH
Confidence 9999999999999999865421 02246999999999
Q ss_pred HHHHcCCChHHHhhhceEEEEecCCCCceeEEEEEEcCCCeEEEEEeCChhHHHhcccccccCCCccccCCHHHHHHHHH
Q 044020 321 FGLRLGGDFEAQRREFKIVKVEPFNSVRKKMSVLIALPAGGMRAFCKGASEIVLSMCDKVVSDNGEPVPLSEEQFRNITD 400 (563)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~sviv~~~~~~~~~~~kG~~~~il~~c~~~~~~~~~~~~~~~~~~~~i~~ 400 (563)
+++.. .+...||++.+++|+++++.+++ .++||+++.+.+.|.. +.+
T Consensus 271 ~~~~~------------~~~~~~f~~~~~~~~~~~~~~~~---~~~~G~~~~i~~~~~~------------------~~~ 317 (499)
T TIGR01494 271 SAKWK------------ILNVFEFSSVRKRMSVIVRGPDG---TYVKGAPEFVLSRVKD------------------LEE 317 (499)
T ss_pred Hhhhc------------CcceeccCCCCceEEEEEecCCc---EEEeCCHHHHHHhhHH------------------HHH
Confidence 88642 13568999999999999886433 3689999999988852 122
Q ss_pred HHHHHHHHHHhHhHhhhhccCCCCCCCCCCCCCceEEEEecccCCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHH
Q 044020 401 VINGFASEALRTLCLAFKDLNDSSNENNIPDSGYTLIAVVGIKDPVRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAK 480 (563)
Q Consensus 401 ~~~~~~~~G~r~i~~a~~~l~~~~~~~~~~~~~~~~lG~i~~~d~~~~~~~~~I~~l~~~gi~v~i~TGd~~~~a~~~a~ 480 (563)
..+.+..+|+|++++|++. +++|++.++|++|+++.++|+.|+++|++++|+|||+..++..+|+
T Consensus 318 ~~~~~~~~g~~~~~~a~~~---------------~~~g~i~l~d~lr~~~~~~i~~l~~~gi~~~~ltGD~~~~a~~ia~ 382 (499)
T TIGR01494 318 KVKELAQSGLRVLAVASKE---------------TLLGLLGLEDPLRDDAKETISELREAGIRVIMLTGDNVLTAKAIAK 382 (499)
T ss_pred HHHHHHhCCCEEEEEEECC---------------eEEEEEEecCCCchhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHH
Confidence 3345778999999999754 7999999999999999999999999999999999999999999999
Q ss_pred HcCCCCCCCceeechhhhcCCCCCCCcceeEEEecChhhHHHHHHHHHHhcCCEEEEEcCCccCHHHHhhCCceEeec
Q 044020 481 ECGILTSDGEAVEGPEFRNMSPADIIPKLQVMARSLPSDKHTLVTQLRNTFGEVVAVTGDGTNDASALHEADIGLAMG 558 (563)
Q Consensus 481 ~lgi~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~~~~g~~v~~iGDg~ND~~~l~~a~vgiamg 558 (563)
++|+ +++++|++|.++++.+|+. |+.|+|+|||.||.+||++||+|||||
T Consensus 383 ~lgi---------------------------~~~~~p~~K~~~v~~l~~~-g~~v~~vGDg~nD~~al~~Advgia~~ 432 (499)
T TIGR01494 383 ELGI---------------------------FARVTPEEKAALVEALQKK-GRVVAMTGDGVNDAPALKKADVGIAMG 432 (499)
T ss_pred HcCc---------------------------eeccCHHHHHHHHHHHHHC-CCEEEEECCChhhHHHHHhCCCccccc
Confidence 9984 5789999999999999988 999999999999999999999999997
|
The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily. |
| >KOG0205 consensus Plasma membrane H+-transporting ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.3e-68 Score=526.93 Aligned_cols=489 Identities=26% Similarity=0.401 Sum_probs=392.1
Q ss_pred hhHHHHHHHHHHHHHHHhccCeeEEEECCEEEEeecCCcccCcEEEeCCCCeeeceEEEEeeCceEEEeccCcCCCCccc
Q 044020 4 AISDYKQSLQFRDLDREKKKIFIQVTRDGQRQKVCTYDLVVGDIVHLSIGDQVPAYGIFISGHSLLIDESSLSGQSEPRY 83 (563)
Q Consensus 4 ~~~~~~~~~~~~~l~~~~~~~~~~V~r~g~~~~i~~~~L~~GDiI~v~~G~~iPaD~~ll~g~~l~Vdes~lTGes~p~~ 83 (563)
.+.||..-.....|.+.+ ..+++|+|||+|.++.++.||||||+.++.|++||||+++++|+.|.||+|+|||||.|+.
T Consensus 115 FveE~nAGn~aa~L~a~L-A~KakVlRDGkw~E~eAs~lVPGDIlsik~GdIiPaDaRLl~gD~LkiDQSAlTGESLpvt 193 (942)
T KOG0205|consen 115 FIEENNAGNAAAALMAGL-APKAKVLRDGKWSEQEASILVPGDILSIKLGDIIPADARLLEGDPLKIDQSALTGESLPVT 193 (942)
T ss_pred eeeccccchHHHHHHhcc-CcccEEeecCeeeeeeccccccCceeeeccCCEecCccceecCCccccchhhhcCCccccc
Confidence 344444444455555443 4578999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCeEEecceeecCcEEEEEEEEcccchhHHHHHHhccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 044020 84 MYEENPFLLAGTKVQGGSGKMLVTTVGMRTEWGKLMETLNEGGEDETPLQVKLNGVATIIGKIELFFSVLEFLVLIGRFL 163 (563)
Q Consensus 84 k~~~~~~i~~Gt~v~~g~~~~~V~~tg~~t~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 163 (563)
|.+++. +|+||.|++|.+.++|++||..|+.|+-..++.. ......+++.++.+-++..+.+. +++++.+ ...|+
T Consensus 194 Kh~gd~-vfSgSTcKqGE~eaVViATg~~TF~GkAA~LVds-t~~~GHFqkVLt~IGn~ci~si~-~g~lie~--~vmy~ 268 (942)
T KOG0205|consen 194 KHPGDE-VFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDS-TNQVGHFQKVLTGIGNFCICSIA-LGMLIEI--TVMYP 268 (942)
T ss_pred cCCCCc-eecccccccceEEEEEEEeccceeehhhHHhhcC-CCCcccHHHHHHhhhhHHHHHHH-HHHHHHH--Hhhhh
Confidence 998888 9999999999999999999999999999999887 66678899988888777654322 2222211 12222
Q ss_pred hccccccccccccchhhHHHHHHHHHHHHhhhhc-cCCchHHHHHHHHHHHHHHHhhCCCeeecchhhhhcCCeeeeecc
Q 044020 164 GEKVIHNEFTDWSSADALTLIDYFAVVVTIIDVA-VPEGLPLAVTLSLAFAMKKLMNDGALVRHLSACETMGSASCICTD 242 (563)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ili~~-~P~~l~~~~~~~~~~~~~~l~~~~i~~k~~~~le~l~~v~~i~~D 242 (563)
.. ....+.....+.++++. +|.++|..++++++.|..+|+++|.+.|...++|.|+.+|++|.|
T Consensus 269 ~q---------------~R~~r~~i~nLlvllIGgiPiamPtVlsvTMAiGs~rLaqqgAItkrmtAIEemAGmdVLCSD 333 (942)
T KOG0205|consen 269 IQ---------------HRLYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSD 333 (942)
T ss_pred hh---------------hhhhhhhhhheheeeecccccccceeeeehhhHHHHHHHhcccHHHHHHHHHHhhCceEEeec
Confidence 11 11233333344444454 999999999999999999999999999999999999999999999
Q ss_pred cccccccCceEEEE--E--EEcCeeeeecCCCccccccccccHHHHHHHHHHHHhccCCceeecCCCCceecCCccHHHH
Q 044020 243 KTRMLTTNHMVVDK--I--WIANTISNVEGNNRKDILQSEISERVLDITLQAIFQNTGSKVVKDKDGKNSILGTPTESAI 318 (563)
Q Consensus 243 KTGTLT~~~~~v~~--i--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~al 318 (563)
||||||.|+++|.+ + +..+- +.+.+ ++.+.... .. ...+.+|.|+
T Consensus 334 KTGTLTlNkLSvdknl~ev~v~gv-----------------~~D~~--~L~A~rAs-r~-----------en~DAID~A~ 382 (942)
T KOG0205|consen 334 KTGTLTLNKLSVDKNLIEVFVKGV-----------------DKDDV--LLTAARAS-RK-----------ENQDAIDAAI 382 (942)
T ss_pred CcCceeecceecCcCcceeeecCC-----------------ChHHH--HHHHHHHh-hh-----------cChhhHHHHH
Confidence 99999999999987 2 21111 12211 11111111 10 1137789999
Q ss_pred HHHHHHcCCChHHHhhhceEEEEecCCCCceeEEEEEEcCCCeEEEEEeCChhHHHhcccccccCCCccccCCHHHHHHH
Q 044020 319 LEFGLRLGGDFEAQRREFKIVKVEPFNSVRKKMSVLIALPAGGMRAFCKGASEIVLSMCDKVVSDNGEPVPLSEEQFRNI 398 (563)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~sviv~~~~~~~~~~~kG~~~~il~~c~~~~~~~~~~~~~~~~~~~~i 398 (563)
+.... +..+.+..++.++..||++..||.+..+.++++....+.||+|++|++.|+. +.+.++++
T Consensus 383 v~~L~----dPKeara~ikevhF~PFnPV~Krta~ty~d~dG~~~r~sKGAPeqil~l~~~-----------~~~i~~~v 447 (942)
T KOG0205|consen 383 VGMLA----DPKEARAGIKEVHFLPFNPVDKRTALTYIDPDGNWHRVSKGAPEQILKLCNE-----------DHDIPERV 447 (942)
T ss_pred HHhhc----CHHHHhhCceEEeeccCCccccceEEEEECCCCCEEEecCCChHHHHHHhhc-----------cCcchHHH
Confidence 98765 3578888999999999999999999999999999999999999999999973 34566788
Q ss_pred HHHHHHHHHHHHhHhHhhhhccCCCCCCCCCCCCCceEEEEecccCCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHH
Q 044020 399 TDVINGFASEALRTLCLAFKDLNDSSNENNIPDSGYTLIAVVGIKDPVRPGVKEAVQTCLEAGITVRMVTGDNINTARAI 478 (563)
Q Consensus 399 ~~~~~~~~~~G~r~i~~a~~~l~~~~~~~~~~~~~~~~lG~i~~~d~~~~~~~~~I~~l~~~gi~v~i~TGd~~~~a~~~ 478 (563)
.+.+++|+++|+|.+++|++..++...+ .....+.|+|+.-+-||+|.++.++|++....|+.|.|+|||...-++..
T Consensus 448 h~~id~~AeRGlRSLgVArq~v~e~~~~--~~g~pw~~~gllp~fdpprhdsa~tirral~lGv~VkmitgdqlaI~keT 525 (942)
T KOG0205|consen 448 HSIIDKFAERGLRSLAVARQEVPEKTKE--SPGGPWEFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKET 525 (942)
T ss_pred HHHHHHHHHhcchhhhhhhhcccccccc--CCCCCcccccccccCCCCccchHHHHHHHHhccceeeeecchHHHHHHhh
Confidence 9999999999999999999987765544 34566789999999999999999999999999999999999999999999
Q ss_pred HHHcCCCCC--CCceeechhh----hcCCCCCCCcceeEEEecChhhHHHHHHHHHHhcCCEEEEEcCCccCHHHHhhCC
Q 044020 479 AKECGILTS--DGEAVEGPEF----RNMSPADIIPKLQVMARSLPSDKHTLVTQLRNTFGEVVAVTGDGTNDASALHEAD 552 (563)
Q Consensus 479 a~~lgi~~~--~~~~~~g~~~----~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~~~~g~~v~~iGDg~ND~~~l~~a~ 552 (563)
++++|+-.+ ++..+.|..- ...+-.++..+..-|+.+.|+||.++|+.||++ ++.++|.|||.||.|+|+.||
T Consensus 526 grrlgmgtnmypss~llG~~~~~~~~~~~v~elie~adgfAgVfpehKy~iV~~Lq~r-~hi~gmtgdgvndapaLKkAd 604 (942)
T KOG0205|consen 526 GRRLGMGTNMYPSSALLGLGKDGSMPGSPVDELIEKADGFAGVFPEHKYEIVKILQER-KHIVGMTGDGVNDAPALKKAD 604 (942)
T ss_pred hhhhccccCcCCchhhccCCCCCCCCCCcHHHHhhhccCccccCHHHHHHHHHHHhhc-CceecccCCCcccchhhcccc
Confidence 999998652 2122222211 111111556667789999999999999999999 999999999999999999999
Q ss_pred ceEeecCCCCC
Q 044020 553 IGLAMGIAGTE 563 (563)
Q Consensus 553 vgiamg~~~~~ 563 (563)
+|||+. .++|
T Consensus 605 igiava-~atd 614 (942)
T KOG0205|consen 605 IGIAVA-DATD 614 (942)
T ss_pred cceeec-cchh
Confidence 999998 7654
|
|
| >TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-67 Score=561.48 Aligned_cols=423 Identities=30% Similarity=0.404 Sum_probs=348.8
Q ss_pred hccCeeEEEECC-EEEEeecCCcccCcEEEeCCCCeeeceEEEEeeCceEEEeccCcCCCCcccccCCCCeEEecceeec
Q 044020 21 KKKIFIQVTRDG-QRQKVCTYDLVVGDIVHLSIGDQVPAYGIFISGHSLLIDESSLSGQSEPRYMYEENPFLLAGTKVQG 99 (563)
Q Consensus 21 ~~~~~~~V~r~g-~~~~i~~~~L~~GDiI~v~~G~~iPaD~~ll~g~~l~Vdes~lTGes~p~~k~~~~~~i~~Gt~v~~ 99 (563)
.++.+++|+||| ++++|++++|+|||+|.+++||+|||||+|++|+. .||||+|||||.|+.|..++. +|+||.+.+
T Consensus 52 ~~~~~~~v~r~~g~~~~i~~~~l~~GDiv~v~~G~~iP~Dg~vi~g~~-~vdes~lTGEs~pv~k~~g~~-v~aGt~v~~ 129 (556)
T TIGR01525 52 LAPSTARVLQGDGSEEEVPVEELQVGDIVIVRPGERIPVDGVVISGES-EVDESALTGESMPVEKKEGDE-VFAGTINGD 129 (556)
T ss_pred cCCCEEEEEECCCeEEEEEHHHCCCCCEEEECCCCEeccceEEEecce-EEeehhccCCCCCEecCCcCE-EeeceEECC
Confidence 346689999996 99999999999999999999999999999999986 999999999999999987665 999999999
Q ss_pred CcEEEEEEEEcccchhHHHHHHhccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccchh
Q 044020 100 GSGKMLVTTVGMRTEWGKLMETLNEGGEDETPLQVKLNGVATIIGKIELFFSVLEFLVLIGRFLGEKVIHNEFTDWSSAD 179 (563)
Q Consensus 100 g~~~~~V~~tg~~t~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (563)
|.++++|+++|.+|++|++.+.+.+++.+++|+++.++++++++.+++++++++++++|+....
T Consensus 130 g~~~~~v~~~g~~t~~~~i~~~~~~~~~~~~~~~~~~~~~a~~~~~~~l~~a~~~~~~~~~~~~---------------- 193 (556)
T TIGR01525 130 GSLTIRVTKLGEDSTLAQIVKLVEEAQSSKAPIQRLADRIASYYVPAVLAIALLTFVVWLALGA---------------- 193 (556)
T ss_pred ceEEEEEEEecccCHHHHHHHHHHHHhhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc----------------
Confidence 9999999999999999999999998888899999999999999999988888888877643210
Q ss_pred hHHHHHHHHHHHHhhhhccCCchHHHHHHHHHHHHHHHhhCCCeeecchhhhhcCCeeeeecccccccccCceEEEEEEE
Q 044020 180 ALTLIDYFAVVVTIIDVAVPEGLPLAVTLSLAFAMKKLMNDGALVRHLSACETMGSASCICTDKTRMLTTNHMVVDKIWI 259 (563)
Q Consensus 180 ~~~~~~~~~~~i~ili~~~P~~l~~~~~~~~~~~~~~l~~~~i~~k~~~~le~l~~v~~i~~DKTGTLT~~~~~v~~i~~ 259 (563)
. ..+..++++++++|||+|++++|+++..+.++++++|+++|+++++|.|+++|++|||||||||+|+|+|.+++.
T Consensus 194 --~--~~~~~~~~vlv~~~P~al~l~~~~~~~~~~~~~~~~gilvk~~~~le~l~~v~~i~fDKTGTLT~~~~~v~~~~~ 269 (556)
T TIGR01525 194 --L--GALYRALAVLVVACPCALGLATPVAILVAIGVAARRGILIKGGDALEKLAKVKTVVFDKTGTLTTGKPTVVDVEP 269 (556)
T ss_pred --c--hHHHHHHHHHhhccccchhehhHHHHHHHHHHHHHCCceecCchHHHHhhcCCEEEEeCCCCCcCCceEEEEEEe
Confidence 0 467788999999999999999999999999999999999999999999999999999999999999999999876
Q ss_pred cCeeeeecCCCccccccccccHHHHHHHHHHHHhccCCceeecCCCCceecCCccHHHHHHHHHHcCCChHHHhhhceEE
Q 044020 260 ANTISNVEGNNRKDILQSEISERVLDITLQAIFQNTGSKVVKDKDGKNSILGTPTESAILEFGLRLGGDFEAQRREFKIV 339 (563)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~al~~~~~~~~~~~~~~~~~~~~~ 339 (563)
.+... ...++.+.+ +.... ..+.||.+.|+++++++.+.+...
T Consensus 270 ~~~~~-------------~~~~~~l~~---a~~~e-------------~~~~hp~~~Ai~~~~~~~~~~~~~-------- 312 (556)
T TIGR01525 270 LDDAS-------------ISEEELLAL---AAALE-------------QSSSHPLARAIVRYAKKRGLELPK-------- 312 (556)
T ss_pred cCCCC-------------ccHHHHHHH---HHHHh-------------ccCCChHHHHHHHHHHhcCCCccc--------
Confidence 54321 001222222 11111 123599999999999876644221
Q ss_pred EEecCCCCceeEEEEEEcCCCeEEEEEeCChhHHHhcccccccCCCccccCCHHHHHHHHHHHHHHHHHHHhHhHhhhhc
Q 044020 340 KVEPFNSVRKKMSVLIALPAGGMRAFCKGASEIVLSMCDKVVSDNGEPVPLSEEQFRNITDVINGFASEALRTLCLAFKD 419 (563)
Q Consensus 340 ~~~~f~~~~~~~sviv~~~~~~~~~~~kG~~~~il~~c~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~G~r~i~~a~~~ 419 (563)
+| +. ...++.++..+++|+++..+..|+.. ..++.. ...+......+.++|++++.++
T Consensus 313 ---~~--~~------~~~~~~gi~~~~~g~~~~~lg~~~~~-~~~~~~-------~~~~~~~~~~~~~~g~~~~~v~--- 370 (556)
T TIGR01525 313 ---QE--DV------EEVPGKGVEATVDGQEEVRIGNPRLL-ELAAEP-------ISASPDLLNEGESQGKTVVFVA--- 370 (556)
T ss_pred ---cc--Ce------eEecCCeEEEEECCeeEEEEecHHHH-hhcCCC-------chhhHHHHHHHhhCCcEEEEEE---
Confidence 11 00 01134455555666555555555432 111111 1122344566778899998887
Q ss_pred cCCCCCCCCCCCCCceEEEEecccCCCCcchHHHHHHHHhCC-CeEEEEcCCCHHHHHHHHHHcCCCCCCCceeechhhh
Q 044020 420 LNDSSNENNIPDSGYTLIAVVGIKDPVRPGVKEAVQTCLEAG-ITVRMVTGDNINTARAIAKECGILTSDGEAVEGPEFR 498 (563)
Q Consensus 420 l~~~~~~~~~~~~~~~~lG~i~~~d~~~~~~~~~I~~l~~~g-i~v~i~TGd~~~~a~~~a~~lgi~~~~~~~~~g~~~~ 498 (563)
.|.+++|.+.++|+++|+++++|++|+++| ++++|+|||+...+..+++++|+..
T Consensus 371 ------------~~~~~~g~i~~~d~~~~g~~e~l~~L~~~g~i~v~ivTgd~~~~a~~i~~~lgi~~------------ 426 (556)
T TIGR01525 371 ------------VDGELLGVIALRDQLRPEAKEAIAALKRAGGIKLVMLTGDNRSAAEAVAAELGIDE------------ 426 (556)
T ss_pred ------------ECCEEEEEEEecccchHhHHHHHHHHHHcCCCeEEEEeCCCHHHHHHHHHHhCCCe------------
Confidence 345999999999999999999999999999 9999999999999999999999976
Q ss_pred cCCCCCCCcceeEEEecChhhHHHHHHHHHHhcCCEEEEEcCCccCHHHHhhCCceEeecCCCC
Q 044020 499 NMSPADIIPKLQVMARSLPSDKHTLVTQLRNTFGEVVAVTGDGTNDASALHEADIGLAMGIAGT 562 (563)
Q Consensus 499 ~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~~~~g~~v~~iGDg~ND~~~l~~a~vgiamg~~~~ 562 (563)
+|+++.|++|.++++.++.. ++.|+|+|||.||++|++.||+|++|| +++
T Consensus 427 ------------~f~~~~p~~K~~~v~~l~~~-~~~v~~vGDg~nD~~al~~A~vgia~g-~~~ 476 (556)
T TIGR01525 427 ------------VHAELLPEDKLAIVKELQEE-GGVVAMVGDGINDAPALAAADVGIAMG-AGS 476 (556)
T ss_pred ------------eeccCCHHHHHHHHHHHHHc-CCEEEEEECChhHHHHHhhCCEeEEeC-CCC
Confidence 99999999999999999987 899999999999999999999999999 664
|
This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512. |
| >TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-66 Score=553.04 Aligned_cols=406 Identities=28% Similarity=0.380 Sum_probs=331.8
Q ss_pred ccCeeEEEEC-CEEEEeecCCcccCcEEEeCCCCeeeceEEEEeeCceEEEeccCcCCCCcccccCCCCeEEecceeecC
Q 044020 22 KKIFIQVTRD-GQRQKVCTYDLVVGDIVHLSIGDQVPAYGIFISGHSLLIDESSLSGQSEPRYMYEENPFLLAGTKVQGG 100 (563)
Q Consensus 22 ~~~~~~V~r~-g~~~~i~~~~L~~GDiI~v~~G~~iPaD~~ll~g~~l~Vdes~lTGes~p~~k~~~~~~i~~Gt~v~~g 100 (563)
.+.+++|+|+ |.+++|++++|+|||+|.|++||+|||||+|++|++ .||||+|||||.|+.|..++. ||+||.+.+|
T Consensus 89 ~p~~a~~~~~~~~~~~v~~~~l~~GDii~v~~Ge~iP~Dg~v~~g~~-~vdes~lTGEs~pv~k~~gd~-V~aGt~~~~g 166 (562)
T TIGR01511 89 QPSTATLLTKDGSIEEVPVALLQPGDIVKVLPGEKIPVDGTVIEGES-EVDESLVTGESLPVPKKVGDP-VIAGTVNGTG 166 (562)
T ss_pred CCCEEEEEECCCeEEEEEHHHCCCCCEEEECCCCEecCceEEEECce-EEehHhhcCCCCcEEcCCCCE-EEeeeEECCc
Confidence 4567888885 677999999999999999999999999999999987 999999999999999988776 9999999999
Q ss_pred cEEEEEEEEcccchhHHHHHHhccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccchhh
Q 044020 101 SGKMLVTTVGMRTEWGKLMETLNEGGEDETPLQVKLNGVATIIGKIELFFSVLEFLVLIGRFLGEKVIHNEFTDWSSADA 180 (563)
Q Consensus 101 ~~~~~V~~tg~~t~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (563)
++.++|+++|.+|.++++.+.+.+++.+++|+++..+++++++.+++++++++++++|.
T Consensus 167 ~~~~~v~~~g~~t~~~~i~~~v~~a~~~k~~~~~~~d~~a~~~~~~v~~~a~~~~~~~~--------------------- 225 (562)
T TIGR01511 167 SLVVRATATGEDTTLAQIVRLVRQAQQSKAPIQRLADKVAGYFVPVVIAIALITFVIWL--------------------- 225 (562)
T ss_pred eEEEEEEEecCCChHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHH---------------------
Confidence 99999999999999999999999999999999999999999999998887777776542
Q ss_pred HHHHHHHHHHHHhhhhccCCchHHHHHHHHHHHHHHHhhCCCeeecchhhhhcCCeeeeecccccccccCceEEEEEEEc
Q 044020 181 LTLIDYFAVVVTIIDVAVPEGLPLAVTLSLAFAMKKLMNDGALVRHLSACETMGSASCICTDKTRMLTTNHMVVDKIWIA 260 (563)
Q Consensus 181 ~~~~~~~~~~i~ili~~~P~~l~~~~~~~~~~~~~~l~~~~i~~k~~~~le~l~~v~~i~~DKTGTLT~~~~~v~~i~~~ 260 (563)
..+..++++|+++|||+|++++|+++..+..+++++|+++|+++++|.|+++|++|||||||||+|+|.|.++...
T Consensus 226 ----~~~~~~~svlvvacPcaL~la~p~a~~~~~~~aa~~gIlik~~~~lE~l~~v~~i~fDKTGTLT~g~~~v~~i~~~ 301 (562)
T TIGR01511 226 ----FALEFAVTVLIIACPCALGLATPTVIAVATGLAAKNGVLIKDGDALERAANIDTVVFDKTGTLTQGKPTVTDVHVF 301 (562)
T ss_pred ----HHHHHHHHHHHHhccchhhhHHHHHHHHHHHHHHHCCeEEcChHHHHHhhCCCEEEECCCCCCcCCCEEEEEEecC
Confidence 2467789999999999999999999999999999999999999999999999999999999999999999998654
Q ss_pred CeeeeecCCCccccccccccHHHHHHHHHHHHhccCCceeecCCCCceecCCccHHHHHHHHHHcCCChHHHhhhceEEE
Q 044020 261 NTISNVEGNNRKDILQSEISERVLDITLQAIFQNTGSKVVKDKDGKNSILGTPTESAILEFGLRLGGDFEAQRREFKIVK 340 (563)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~al~~~~~~~~~~~~~~~~~~~~~~ 340 (563)
+... .++.+.+. ...+. .+.||.+.|+++++++.+.+... ..-.+
T Consensus 302 ~~~~---------------~~~~l~~a---a~~e~-------------~s~HPia~Ai~~~~~~~~~~~~~----~~~~~ 346 (562)
T TIGR01511 302 GDRD---------------RTELLALA---AALEA-------------GSEHPLAKAIVSYAKEKGITLVE----VSDFK 346 (562)
T ss_pred CCCC---------------HHHHHHHH---HHHhc-------------cCCChHHHHHHHHHHhcCCCcCC----CCCeE
Confidence 3310 12223322 22221 12499999999999876543211 11111
Q ss_pred EecCCCCceeEEEEEEcCCCeEEEEEeCChhHHHhcccccccCCCccccCCHHHHHHHHHHHHHHHHHHHhHhHhhhhcc
Q 044020 341 VEPFNSVRKKMSVLIALPAGGMRAFCKGASEIVLSMCDKVVSDNGEPVPLSEEQFRNITDVINGFASEALRTLCLAFKDL 420 (563)
Q Consensus 341 ~~~f~~~~~~~sviv~~~~~~~~~~~kG~~~~il~~c~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~G~r~i~~a~~~l 420 (563)
.+| .+.+.. ...+ ..+..|+++.+.+. +. .+++ +.++|.+++.++
T Consensus 347 ~~~----g~Gi~~--~~~g---~~~~iG~~~~~~~~--------~~--~~~~------------~~~~g~~~~~~~---- 391 (562)
T TIGR01511 347 AIP----GIGVEG--TVEG---TKIQLGNEKLLGEN--------AI--KIDG------------KAEQGSTSVLVA---- 391 (562)
T ss_pred EEC----CceEEE--EECC---EEEEEECHHHHHhC--------CC--CCCh------------hhhCCCEEEEEE----
Confidence 111 111111 1122 12334666655321 11 1111 224566666554
Q ss_pred CCCCCCCCCCCCCceEEEEecccCCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCceeechhhhcC
Q 044020 421 NDSSNENNIPDSGYTLIAVVGIKDPVRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAKECGILTSDGEAVEGPEFRNM 500 (563)
Q Consensus 421 ~~~~~~~~~~~~~~~~lG~i~~~d~~~~~~~~~I~~l~~~gi~v~i~TGd~~~~a~~~a~~lgi~~~~~~~~~g~~~~~~ 500 (563)
.|.+++|++.++|+++|+++++|++|++.|++++|+|||+...+..+++++|++
T Consensus 392 -----------~~~~~~g~~~~~d~l~~~a~e~i~~Lk~~Gi~v~ilSgd~~~~a~~ia~~lgi~--------------- 445 (562)
T TIGR01511 392 -----------VNGELAGVFALEDQLRPEAKEVIQALKRRGIEPVMLTGDNRKTAKAVAKELGIN--------------- 445 (562)
T ss_pred -----------ECCEEEEEEEecccccHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHcCCc---------------
Confidence 567999999999999999999999999999999999999999999999999995
Q ss_pred CCCCCCcceeEEEecChhhHHHHHHHHHHhcCCEEEEEcCCccCHHHHhhCCceEeecCCCC
Q 044020 501 SPADIIPKLQVMARSLPSDKHTLVTQLRNTFGEVVAVTGDGTNDASALHEADIGLAMGIAGT 562 (563)
Q Consensus 501 ~~~~~~~~~~v~~~~~p~~K~~~v~~l~~~~g~~v~~iGDg~ND~~~l~~a~vgiamg~~~~ 562 (563)
+|++..|++|.++++.++++ +++|+|+|||.||++|++.||+||+|| +++
T Consensus 446 ----------~~~~~~p~~K~~~v~~l~~~-~~~v~~VGDg~nD~~al~~A~vgia~g-~g~ 495 (562)
T TIGR01511 446 ----------VRAEVLPDDKAALIKELQEK-GRVVAMVGDGINDAPALAQADVGIAIG-AGT 495 (562)
T ss_pred ----------EEccCChHHHHHHHHHHHHc-CCEEEEEeCCCccHHHHhhCCEEEEeC-CcC
Confidence 78889999999999999998 899999999999999999999999999 765
|
One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification. |
| >PRK10671 copA copper exporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-65 Score=569.69 Aligned_cols=440 Identities=26% Similarity=0.343 Sum_probs=355.8
Q ss_pred hhHHHHHHHHHHHHHH----H--hccCeeEEEECCEEEEeecCCcccCcEEEeCCCCeeeceEEEEeeCceEEEeccCcC
Q 044020 4 AISDYKQSLQFRDLDR----E--KKKIFIQVTRDGQRQKVCTYDLVVGDIVHLSIGDQVPAYGIFISGHSLLIDESSLSG 77 (563)
Q Consensus 4 ~~~~~~~~~~~~~l~~----~--~~~~~~~V~r~g~~~~i~~~~L~~GDiI~v~~G~~iPaD~~ll~g~~l~Vdes~lTG 77 (563)
.+.+|.+++...+..+ . ..+.+++|+|||.+++|++++|+|||+|.|++||+||+||+|++|+. .||||+|||
T Consensus 297 ~~g~~le~~~~~~~~~~~~~L~~l~p~~a~~~~~~~~~~v~~~~l~~GD~v~v~~G~~iP~Dg~v~~g~~-~vdeS~lTG 375 (834)
T PRK10671 297 NLGHMLEARARQRSSKALEKLLDLTPPTARVVTDEGEKSVPLADVQPGMLLRLTTGDRVPVDGEITQGEA-WLDEAMLTG 375 (834)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccCCCEEEEEeCCcEEEEEHHHcCCCCEEEEcCCCEeeeeEEEEEceE-EEeehhhcC
Confidence 3445555554443332 2 34667899999999999999999999999999999999999999975 999999999
Q ss_pred CCCcccccCCCCeEEecceeecCcEEEEEEEEcccchhHHHHHHhccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHH
Q 044020 78 QSEPRYMYEENPFLLAGTKVQGGSGKMLVTTVGMRTEWGKLMETLNEGGEDETPLQVKLNGVATIIGKIELFFSVLEFLV 157 (563)
Q Consensus 78 es~p~~k~~~~~~i~~Gt~v~~g~~~~~V~~tg~~t~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 157 (563)
||.|+.|..++. ||+||.+.+|.+.++|+++|.+|.++++.+++++++..++|+++..++++.++.+++++++++++++
T Consensus 376 Es~pv~k~~gd~-V~aGt~~~~G~~~~~v~~~g~~t~l~~i~~lv~~a~~~k~~~~~~~d~~a~~~v~~v~~~a~~~~~~ 454 (834)
T PRK10671 376 EPIPQQKGEGDS-VHAGTVVQDGSVLFRASAVGSHTTLSRIIRMVRQAQSSKPEIGQLADKISAVFVPVVVVIALVSAAI 454 (834)
T ss_pred CCCCEecCCCCE-EEecceecceeEEEEEEEEcCcChHHHHHHHHHHHhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999987765 9999999999999999999999999999999999988999999999999999999999888888877
Q ss_pred HHHHHhhccccccccccccchhhHHHHHHHHHHHHhhhhccCCchHHHHHHHHHHHHHHHhhCCCeeecchhhhhcCCee
Q 044020 158 LIGRFLGEKVIHNEFTDWSSADALTLIDYFAVVVTIIDVAVPEGLPLAVTLSLAFAMKKLMNDGALVRHLSACETMGSAS 237 (563)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ili~~~P~~l~~~~~~~~~~~~~~l~~~~i~~k~~~~le~l~~v~ 237 (563)
|++. .. + ..+...+..++++|+++|||+|++++|+++..+..+++++|+++|+++++|.|+++|
T Consensus 455 ~~~~--~~---------~-----~~~~~~~~~a~~vlv~acPcaL~la~p~a~~~~~~~~a~~gilvk~~~~le~l~~v~ 518 (834)
T PRK10671 455 WYFF--GP---------A-----PQIVYTLVIATTVLIIACPCALGLATPMSIISGVGRAAEFGVLVRDADALQRASTLD 518 (834)
T ss_pred HHHh--CC---------c-----hHHHHHHHHHHHHHHHhcccchhhhHHHHHHHHHHHHHHCCeEEecHHHHHhhcCCC
Confidence 6432 10 0 124556788999999999999999999999999999999999999999999999999
Q ss_pred eeecccccccccCceEEEEEEEcCeeeeecCCCccccccccccHHHHHHHHHHHHhccCCceeecCCCCceecCCccHHH
Q 044020 238 CICTDKTRMLTTNHMVVDKIWIANTISNVEGNNRKDILQSEISERVLDITLQAIFQNTGSKVVKDKDGKNSILGTPTESA 317 (563)
Q Consensus 238 ~i~~DKTGTLT~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a 317 (563)
++|||||||||+|+|+|.+++..+... ..+. +..+...+.. +.||.+.|
T Consensus 519 ~v~fDKTGTLT~g~~~v~~~~~~~~~~---------------~~~~---l~~a~~~e~~-------------s~hp~a~A 567 (834)
T PRK10671 519 TLVFDKTGTLTEGKPQVVAVKTFNGVD---------------EAQA---LRLAAALEQG-------------SSHPLARA 567 (834)
T ss_pred EEEEcCCCccccCceEEEEEEccCCCC---------------HHHH---HHHHHHHhCC-------------CCCHHHHH
Confidence 999999999999999999876543210 1122 2222222222 24999999
Q ss_pred HHHHHHHcCCChHHHhhhceEEEEecCCCCceeEEEEEEcCCCeEEEEEeCChhHHHhcccccccCCCccccCCHHHHHH
Q 044020 318 ILEFGLRLGGDFEAQRREFKIVKVEPFNSVRKKMSVLIALPAGGMRAFCKGASEIVLSMCDKVVSDNGEPVPLSEEQFRN 397 (563)
Q Consensus 318 l~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~sviv~~~~~~~~~~~kG~~~~il~~c~~~~~~~~~~~~~~~~~~~~ 397 (563)
+++++...... ...+|+....+ .+.... ++. .+..|+++.+.+.. ++ .+.
T Consensus 568 i~~~~~~~~~~-----------~~~~~~~~~g~-Gv~~~~-~g~--~~~~G~~~~~~~~~------------~~---~~~ 617 (834)
T PRK10671 568 ILDKAGDMTLP-----------QVNGFRTLRGL-GVSGEA-EGH--ALLLGNQALLNEQQ------------VD---TKA 617 (834)
T ss_pred HHHHHhhCCCC-----------CcccceEecce-EEEEEE-CCE--EEEEeCHHHHHHcC------------CC---hHH
Confidence 99987632210 11223322211 111111 222 23458888764321 11 123
Q ss_pred HHHHHHHHHHHHHhHhHhhhhccCCCCCCCCCCCCCceEEEEecccCCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHH
Q 044020 398 ITDVINGFASEALRTLCLAFKDLNDSSNENNIPDSGYTLIAVVGIKDPVRPGVKEAVQTCLEAGITVRMVTGDNINTARA 477 (563)
Q Consensus 398 i~~~~~~~~~~G~r~i~~a~~~l~~~~~~~~~~~~~~~~lG~i~~~d~~~~~~~~~I~~l~~~gi~v~i~TGd~~~~a~~ 477 (563)
+.+.++.+.++|.+++.+++ +..++|++.+.|++||+++++|++|++.|++++|+|||+...+..
T Consensus 618 ~~~~~~~~~~~g~~~v~va~---------------~~~~~g~~~l~d~~r~~a~~~i~~L~~~gi~v~~~Tgd~~~~a~~ 682 (834)
T PRK10671 618 LEAEITAQASQGATPVLLAV---------------DGKAAALLAIRDPLRSDSVAALQRLHKAGYRLVMLTGDNPTTANA 682 (834)
T ss_pred HHHHHHHHHhCCCeEEEEEE---------------CCEEEEEEEccCcchhhHHHHHHHHHHCCCeEEEEcCCCHHHHHH
Confidence 45556677888999888874 348999999999999999999999999999999999999999999
Q ss_pred HHHHcCCCCCCCceeechhhhcCCCCCCCcceeEEEecChhhHHHHHHHHHHhcCCEEEEEcCCccCHHHHhhCCceEee
Q 044020 478 IAKECGILTSDGEAVEGPEFRNMSPADIIPKLQVMARSLPSDKHTLVTQLRNTFGEVVAVTGDGTNDASALHEADIGLAM 557 (563)
Q Consensus 478 ~a~~lgi~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~~~~g~~v~~iGDg~ND~~~l~~a~vgiam 557 (563)
+++++|+.. +|++..|++|.++++.++.+ ++.|+|+|||.||++|++.||+||||
T Consensus 683 ia~~lgi~~------------------------~~~~~~p~~K~~~i~~l~~~-~~~v~~vGDg~nD~~al~~Agvgia~ 737 (834)
T PRK10671 683 IAKEAGIDE------------------------VIAGVLPDGKAEAIKRLQSQ-GRQVAMVGDGINDAPALAQADVGIAM 737 (834)
T ss_pred HHHHcCCCE------------------------EEeCCCHHHHHHHHHHHhhc-CCEEEEEeCCHHHHHHHHhCCeeEEe
Confidence 999999986 99999999999999999998 99999999999999999999999999
Q ss_pred cCCCCC
Q 044020 558 GIAGTE 563 (563)
Q Consensus 558 g~~~~~ 563 (563)
| +|++
T Consensus 738 g-~g~~ 742 (834)
T PRK10671 738 G-GGSD 742 (834)
T ss_pred c-CCCH
Confidence 9 7764
|
|
| >TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-65 Score=545.42 Aligned_cols=401 Identities=27% Similarity=0.341 Sum_probs=328.2
Q ss_pred ccCeeEEEECCEEEEeecCCcccCcEEEeCCCCeeeceEEEEeeCceEEEeccCcCCCCcccccCCCCeEEecceeecCc
Q 044020 22 KKIFIQVTRDGQRQKVCTYDLVVGDIVHLSIGDQVPAYGIFISGHSLLIDESSLSGQSEPRYMYEENPFLLAGTKVQGGS 101 (563)
Q Consensus 22 ~~~~~~V~r~g~~~~i~~~~L~~GDiI~v~~G~~iPaD~~ll~g~~l~Vdes~lTGes~p~~k~~~~~~i~~Gt~v~~g~ 101 (563)
++.+++|+|||+++.+++++|+|||+|.|++||+|||||+|++|+. .||||+|||||.|+.|..++. +|+||.+.+|.
T Consensus 53 ~~~~~~v~r~g~~~~i~~~~l~~GDiv~v~~G~~iP~Dg~ii~g~~-~vdes~lTGEs~pv~k~~g~~-v~aGt~v~~G~ 130 (536)
T TIGR01512 53 APDTARVLRGGSLEEVAVEELKVGDVVVVKPGERVPVDGVVLSGTS-TVDESALTGESVPVEKAPGDE-VFAGAINLDGV 130 (536)
T ss_pred CCCEEEEEECCEEEEEEHHHCCCCCEEEEcCCCEeecceEEEeCcE-EEEecccCCCCCcEEeCCCCE-EEeeeEECCce
Confidence 5678999999999999999999999999999999999999999976 999999999999999987665 99999999999
Q ss_pred EEEEEEEEcccchhHHHHHHhccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccchhhH
Q 044020 102 GKMLVTTVGMRTEWGKLMETLNEGGEDETPLQVKLNGVATIIGKIELFFSVLEFLVLIGRFLGEKVIHNEFTDWSSADAL 181 (563)
Q Consensus 102 ~~~~V~~tg~~t~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (563)
++++|++||.+|++|++.+.+.+++.+++|+++.++++++++.++++.++++++++|.+. . .|
T Consensus 131 ~~~~V~~~g~~t~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~---------~~------ 193 (536)
T TIGR01512 131 LTIVVTKLPADSTIAKIVNLVEEAQSRKAKTQRFIDRFARYYTPVVLAIALAIWLVPGLL--K---------RW------ 193 (536)
T ss_pred EEEEEEEeccccHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--c---------cc------
Confidence 999999999999999999999988888999999999999999999888777766654321 0 01
Q ss_pred HHHHHHHHHHHhhhhccCCchHHHHHHHHHHHHHHHhhCCCeeecchhhhhcCCeeeeecccccccccCceEEEEEEEcC
Q 044020 182 TLIDYFAVVVTIIDVAVPEGLPLAVTLSLAFAMKKLMNDGALVRHLSACETMGSASCICTDKTRMLTTNHMVVDKIWIAN 261 (563)
Q Consensus 182 ~~~~~~~~~i~ili~~~P~~l~~~~~~~~~~~~~~l~~~~i~~k~~~~le~l~~v~~i~~DKTGTLT~~~~~v~~i~~~~ 261 (563)
...+..++++++++|||+|++++|+++..+.++++++|+++|+++++|.++++|++|||||||||+|+|+|.+++..
T Consensus 194 --~~~~~~~~svlv~~~P~aL~la~~~~~~~~~~~~~k~gilik~~~~le~l~~v~~i~fDKTGTLT~~~~~v~~~~~~- 270 (536)
T TIGR01512 194 --PFWVYRALVLLVVASPCALVISAPAAYLSAISAAARHGILIKGGAALEALAKIKTVAFDKTGTLTTGRPKVVDVVPA- 270 (536)
T ss_pred --HHHHHHHHHHHhhcCccccccchHHHHHHHHHHHHHCCeEEcCcHHHHhhcCCCEEEECCCCCCcCCceEEEEeeHH-
Confidence 12677789999999999999999999999999999999999999999999999999999999999999999987421
Q ss_pred eeeeecCCCccccccccccHHHHHHHHHHHHhccCCceeecCCCCceecCCccHHHHHHHHHHcCCChHHHhhhceEEEE
Q 044020 262 TISNVEGNNRKDILQSEISERVLDITLQAIFQNTGSKVVKDKDGKNSILGTPTESAILEFGLRLGGDFEAQRREFKIVKV 341 (563)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~al~~~~~~~~~~~~~~~~~~~~~~~ 341 (563)
+++... .... ..+.||.+.|+++++.+.+ .+.-...
T Consensus 271 --------------------~~l~~a---~~~e-------------~~~~hp~~~Ai~~~~~~~~--------~~~~~~~ 306 (536)
T TIGR01512 271 --------------------EVLRLA---AAAE-------------QASSHPLARAIVDYARKRE--------NVESVEE 306 (536)
T ss_pred --------------------HHHHHH---HHHh-------------ccCCCcHHHHHHHHHHhcC--------CCcceEE
Confidence 122222 1111 1225999999999987653 1111111
Q ss_pred ecCCCCceeEEEEEEcCCCeEEEEEeCChhHHHhcccccccCCCccccCCHHHHHHHHHHHHHHHHHHHhHhHhhhhccC
Q 044020 342 EPFNSVRKKMSVLIALPAGGMRAFCKGASEIVLSMCDKVVSDNGEPVPLSEEQFRNITDVINGFASEALRTLCLAFKDLN 421 (563)
Q Consensus 342 ~~f~~~~~~~sviv~~~~~~~~~~~kG~~~~il~~c~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~G~r~i~~a~~~l~ 421 (563)
.|. +.+. ....+.. +..|+++.+.+. + + ..+..+|.+++.++
T Consensus 307 ~~g----~gi~--~~~~g~~---~~ig~~~~~~~~--------~----~------------~~~~~~~~~~~~v~----- 348 (536)
T TIGR01512 307 VPG----EGVR--AVVDGGE---VRIGNPRSLEAA--------V----G------------ARPESAGKTIVHVA----- 348 (536)
T ss_pred ecC----CeEE--EEECCeE---EEEcCHHHHhhc--------C----C------------cchhhCCCeEEEEE-----
Confidence 111 1111 1112222 223665443211 0 0 02334455554443
Q ss_pred CCCCCCCCCCCCceEEEEecccCCCCcchHHHHHHHHhCCC-eEEEEcCCCHHHHHHHHHHcCCCCCCCceeechhhhcC
Q 044020 422 DSSNENNIPDSGYTLIAVVGIKDPVRPGVKEAVQTCLEAGI-TVRMVTGDNINTARAIAKECGILTSDGEAVEGPEFRNM 500 (563)
Q Consensus 422 ~~~~~~~~~~~~~~~lG~i~~~d~~~~~~~~~I~~l~~~gi-~v~i~TGd~~~~a~~~a~~lgi~~~~~~~~~g~~~~~~ 500 (563)
.|..++|.+.++|+++|+++++|++|+++|+ +++++|||+...+..+++++|+.+
T Consensus 349 ----------~~~~~~g~i~~~d~l~~~~~e~i~~L~~~Gi~~v~vvTgd~~~~a~~i~~~lgi~~-------------- 404 (536)
T TIGR01512 349 ----------RDGTYLGYILLSDEPRPDAAEAIAELKALGIEKVVMLTGDRRAVAERVARELGIDE-------------- 404 (536)
T ss_pred ----------ECCEEEEEEEEeccchHHHHHHHHHHHHcCCCcEEEEcCCCHHHHHHHHHHcCChh--------------
Confidence 5679999999999999999999999999999 999999999999999999999986
Q ss_pred CCCCCCcceeEEEecChhhHHHHHHHHHHhcCCEEEEEcCCccCHHHHhhCCceEeecCCC
Q 044020 501 SPADIIPKLQVMARSLPSDKHTLVTQLRNTFGEVVAVTGDGTNDASALHEADIGLAMGIAG 561 (563)
Q Consensus 501 ~~~~~~~~~~v~~~~~p~~K~~~v~~l~~~~g~~v~~iGDg~ND~~~l~~a~vgiamg~~~ 561 (563)
+|++..|++|..+++.++.. ++.|+|+|||.||++|++.||+||+||.++
T Consensus 405 ----------~f~~~~p~~K~~~i~~l~~~-~~~v~~vGDg~nD~~al~~A~vgia~g~~~ 454 (536)
T TIGR01512 405 ----------VHAELLPEDKLEIVKELREK-YGPVAMVGDGINDAPALAAADVGIAMGASG 454 (536)
T ss_pred ----------hhhccCcHHHHHHHHHHHhc-CCEEEEEeCCHHHHHHHHhCCEEEEeCCCc
Confidence 89999999999999999998 899999999999999999999999999434
|
. |
| >KOG0209 consensus P-type ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-66 Score=526.24 Aligned_cols=506 Identities=24% Similarity=0.352 Sum_probs=385.0
Q ss_pred HHHHHHHHHHHHHHhc-cCeeEEEECCEEEEeecCCcccCcEEEeCC---CCeeeceEEEEeeCceEEEeccCcCCCCcc
Q 044020 7 DYKQSLQFRDLDREKK-KIFIQVTRDGQRQKVCTYDLVVGDIVHLSI---GDQVPAYGIFISGHSLLIDESSLSGQSEPR 82 (563)
Q Consensus 7 ~~~~~~~~~~l~~~~~-~~~~~V~r~g~~~~i~~~~L~~GDiI~v~~---G~~iPaD~~ll~g~~l~Vdes~lTGes~p~ 82 (563)
-+++-+...++.+.-+ +..+.|.|+++|+.+.++||.|||+|.|.. ...+|||.+++.|++ .|||++|||||.|.
T Consensus 235 V~Qrm~~lse~R~Mg~kpy~I~v~R~kKW~~l~seeLlPgDvVSI~r~~ed~~vPCDllLL~Gsc-iVnEaMLtGESvPl 313 (1160)
T KOG0209|consen 235 VKQRMRTLSEFRTMGNKPYTINVYRNKKWVKLMSEELLPGDVVSIGRGAEDSHVPCDLLLLRGSC-IVNEAMLTGESVPL 313 (1160)
T ss_pred HHHHHHHHHHHHhcCCCceEEEEEecCcceeccccccCCCceEEeccCcccCcCCceEEEEecce-eechhhhcCCCccc
Confidence 3455555555555543 456899999999999999999999999998 558999999999986 89999999999998
Q ss_pred ccc----------------CCCCeEEecceee-------------cCcEEEEEEEEcccchhHHHHHHhccCCCCCCchH
Q 044020 83 YMY----------------EENPFLLAGTKVQ-------------GGSGKMLVTTVGMRTEWGKLMETLNEGGEDETPLQ 133 (563)
Q Consensus 83 ~k~----------------~~~~~i~~Gt~v~-------------~g~~~~~V~~tg~~t~~~~i~~~~~~~~~~~~~~~ 133 (563)
.|. ....++|+||+++ +|...+.|++||.+|..|++++.+..+..+-+.-.
T Consensus 314 ~KE~Ie~~~~d~~ld~~~d~k~hVlfGGTkivQht~p~~~slk~pDggc~a~VlrTGFeTSQGkLvRtilf~aervTaNn 393 (1160)
T KOG0209|consen 314 MKESIELRDSDDILDIDRDDKLHVLFGGTKIVQHTPPKKASLKTPDGGCVAYVLRTGFETSQGKLVRTILFSAERVTANN 393 (1160)
T ss_pred cccccccCChhhhcccccccceEEEEcCceEEEecCCccccccCCCCCeEEEEEeccccccCCceeeeEEecceeeeecc
Confidence 885 1345799999997 57789999999999999999999988554444322
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccchhhHHHHHHHHHHHHhhhhccCCchHHHHHHHHHHH
Q 044020 134 VKLNGVATIIGKIELFFSVLEFLVLIGRFLGEKVIHNEFTDWSSADALTLIDYFAVVVTIIDVAVPEGLPLAVTLSLAFA 213 (563)
Q Consensus 134 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ili~~~P~~l~~~~~~~~~~~ 213 (563)
+. +.+|+.+.++ |.+...++.+ ..+. . ....+-+..|.-++.+|...+|+.||+-++++.-.+
T Consensus 394 ~E----tf~FILFLlV-----FAiaAa~Yvw---v~Gs-k----d~~RsrYKL~LeC~LIlTSVvPpELPmELSmAVNsS 456 (1160)
T KOG0209|consen 394 RE----TFIFILFLLV-----FAIAAAGYVW---VEGS-K----DPTRSRYKLFLECTLILTSVVPPELPMELSMAVNSS 456 (1160)
T ss_pred HH----HHHHHHHHHH-----HHHHhhheEE---Eecc-c----CcchhhhheeeeeeEEEeccCCCCCchhhhHHHHHH
Confidence 22 1222222222 2222111111 1000 0 011233455667777888889999999999999999
Q ss_pred HHHHhhCCCeeecchhhhhcCCeeeeecccccccccCceEEEEEEEcCeeeeecCCCccccccccccHHHHHHHHHHHHh
Q 044020 214 MKKLMNDGALVRHLSACETMGSASCICTDKTRMLTTNHMVVDKIWIANTISNVEGNNRKDILQSEISERVLDITLQAIFQ 293 (563)
Q Consensus 214 ~~~l~~~~i~~k~~~~le~l~~v~~i~~DKTGTLT~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (563)
...|+|.+++|..|..+.-+|++|+.|||||||||...|.|.++.-......... ..+....+.... +..
T Consensus 457 L~ALak~~vyCTEPFRIPfAGkvdvCCFDKTGTLT~d~lvv~Gvag~~~~~~~~~------~~s~~p~~t~~v----lAs 526 (1160)
T KOG0209|consen 457 LIALAKLGVYCTEPFRIPFAGKVDVCCFDKTGTLTEDDLVVEGVAGLSADEGALT------PASKAPNETVLV----LAS 526 (1160)
T ss_pred HHHHHHhceeecCccccccCCceeEEEecCCCccccccEEEEecccccCCccccc------chhhCCchHHHH----HHH
Confidence 9999999999999999999999999999999999999999999765333211100 011111222222 223
Q ss_pred ccCCceeecCCCCceecCCccHHHHHHHH-HHcCCC-----hHHHhhhceEEEEecCCCCceeEEEEEEcCC----CeEE
Q 044020 294 NTGSKVVKDKDGKNSILGTPTESAILEFG-LRLGGD-----FEAQRREFKIVKVEPFNSVRKKMSVLIALPA----GGMR 363 (563)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~e~al~~~~-~~~~~~-----~~~~~~~~~~~~~~~f~~~~~~~sviv~~~~----~~~~ 363 (563)
||+.-...+ ...|||.|+|.++.. +..... .+...+..++.+.++|+|.-|||||++...+ -.++
T Consensus 527 cHsLv~le~-----~lVGDPlEKA~l~~v~W~~~k~~~v~p~~~~~~~lkI~~ryhFsSaLKRmsvva~~~~~g~s~k~~ 601 (1160)
T KOG0209|consen 527 CHSLVLLED-----KLVGDPLEKATLEAVGWNLEKKNSVCPREGNGKKLKIIQRYHFSSALKRMSVVASHQGPGSSEKYF 601 (1160)
T ss_pred HHHHHHhcC-----cccCChHHHHHHHhcCcccccCcccCCCcCCCcccchhhhhhHHHHHHHHHhhhhcccCCCceEEE
Confidence 333221111 277999999999976 322111 1122235778899999999999999997754 2688
Q ss_pred EEEeCChhHHHhcccccccCCCccccCCHHHHHHHHHHHHHHHHHHHhHhHhhhhccCCC------CCCCCCCCCCceEE
Q 044020 364 AFCKGASEIVLSMCDKVVSDNGEPVPLSEEQFRNITDVINGFASEALRTLCLAFKDLNDS------SNENNIPDSGYTLI 437 (563)
Q Consensus 364 ~~~kG~~~~il~~c~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~G~r~i~~a~~~l~~~------~~~~~~~~~~~~~l 437 (563)
+.+||+||.+..+-... ...+.+.+.+|+++|.||+|++||++..- +.++..+|.+++|.
T Consensus 602 ~aVKGAPEvi~~ml~dv--------------P~dY~~iYk~ytR~GsRVLALg~K~l~~~~~~q~rd~~Re~vEsdLtFa 667 (1160)
T KOG0209|consen 602 VAVKGAPEVIQEMLRDV--------------PKDYDEIYKRYTRQGSRVLALGYKPLGDMMVSQVRDLKREDVESDLTFA 667 (1160)
T ss_pred EEecCCHHHHHHHHHhC--------------chhHHHHHHHHhhccceEEEEecccccccchhhhhhhhhhhhhhcceee
Confidence 99999999998765432 25678889999999999999999999842 24557899999999
Q ss_pred EEecccCCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCC-----------------------------
Q 044020 438 AVVGIKDPVRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAKECGILTSD----------------------------- 488 (563)
Q Consensus 438 G~i~~~d~~~~~~~~~I~~l~~~gi~v~i~TGd~~~~a~~~a~~lgi~~~~----------------------------- 488 (563)
|++.|..|++++++++|+.|++++++++|+|||++.+|.++|+++||....
T Consensus 668 GFlif~CPlK~Ds~~~I~el~~SSH~vvMITGDnpLTAchVak~v~iv~k~~~vl~~~~~~~~~~~~w~s~d~t~~lp~~ 747 (1160)
T KOG0209|consen 668 GFLIFSCPLKPDSKKTIKELNNSSHRVVMITGDNPLTACHVAKEVGIVEKPTLVLDLPEEGDGNQLEWVSVDGTIVLPLK 747 (1160)
T ss_pred eeEEEeCCCCccHHHHHHHHhccCceEEEEeCCCccchheehheeeeeccCceeeccCccCCCceeeEecCCCceeecCC
Confidence 999999999999999999999999999999999999999999999987531
Q ss_pred ------------CceeechhhhcCCCC----CCCcceeEEEecChhhHHHHHHHHHHhcCCEEEEEcCCccCHHHHhhCC
Q 044020 489 ------------GEAVEGPEFRNMSPA----DIIPKLQVMARSLPSDKHTLVTQLRNTFGEVVAVTGDGTNDASALHEAD 552 (563)
Q Consensus 489 ------------~~~~~g~~~~~~~~~----~~~~~~~v~~~~~p~~K~~~v~~l~~~~g~~v~~iGDg~ND~~~l~~a~ 552 (563)
+.+++|..++.+... .+++.+.||||+.|.||..++..+++. |+.++|+|||.||+.||++||
T Consensus 748 p~~~~~~l~~~~dlcitG~~l~~l~~~~~l~~l~~hv~VfARvaP~QKE~ii~tlK~~-Gy~TLMCGDGTNDVGALK~Ah 826 (1160)
T KOG0209|consen 748 PGKKKTLLAETHDLCITGSALDHLQATDQLRRLIPHVWVFARVAPKQKEFIITTLKKL-GYVTLMCGDGTNDVGALKQAH 826 (1160)
T ss_pred CCccchhhhhhhhhhcchhHHHHHhhhHHHHHhhhheeEEEeeChhhHHHHHHHHHhc-CeEEEEecCCCcchhhhhhcc
Confidence 235556666555444 567778899999999999999999997 999999999999999999999
Q ss_pred ceEeecCCC
Q 044020 553 IGLAMGIAG 561 (563)
Q Consensus 553 vgiamg~~~ 561 (563)
||||.= |+
T Consensus 827 VGVALL-~~ 834 (1160)
T KOG0209|consen 827 VGVALL-NN 834 (1160)
T ss_pred cceehh-cC
Confidence 999987 44
|
|
| >KOG0206 consensus P-type ATPase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-62 Score=535.85 Aligned_cols=544 Identities=24% Similarity=0.337 Sum_probs=428.8
Q ss_pred chhhHHHHHHHHHHHHHHHhccCeeEEEECCE-EEEeecCCcccCcEEEeCCCCeeeceEEEEeeCc----eEEEeccCc
Q 044020 2 VTAISDYKQSLQFRDLDREKKKIFIQVTRDGQ-RQKVCTYDLVVGDIVHLSIGDQVPAYGIFISGHS----LLIDESSLS 76 (563)
Q Consensus 2 ~~~~~~~~~~~~~~~l~~~~~~~~~~V~r~g~-~~~i~~~~L~~GDiI~v~~G~~iPaD~~ll~g~~----l~Vdes~lT 76 (563)
+|+++|..++.++++.|++.|+.++.|.|++. ++...|++|++||+|.+..++.+|||.++++++. |+|+++.|+
T Consensus 93 ~t~iKd~~eD~rR~~~D~~iN~~~~~v~~~~~~~~~~~wk~~~vGd~v~v~~~~~~paD~llLsss~~~~~cyveT~nLD 172 (1151)
T KOG0206|consen 93 ITAIKDAIEDYRRHKQDKEVNNRKVEVLRGDGCFVEKKWKDVRVGDIVRVEKDEFVPADLLLLSSSDEDGICYVETANLD 172 (1151)
T ss_pred HHHHHHHHhhhhhhhccHHhhcceeEEecCCceeeeeccceeeeeeEEEeccCCccccceEEecCCCCCceeEEEEeecC
Confidence 68999999999999999999999999999644 8999999999999999999999999999998764 899999999
Q ss_pred CCCCccccc----------------------------------------------CCCCeEEecceeec-CcEEEEEEEE
Q 044020 77 GQSEPRYMY----------------------------------------------EENPFLLAGTKVQG-GSGKMLVTTV 109 (563)
Q Consensus 77 Ges~p~~k~----------------------------------------------~~~~~i~~Gt~v~~-g~~~~~V~~t 109 (563)
||+..+.|+ ..+++++.|+++.+ .++.+.|+.|
T Consensus 173 GEtnLK~k~~l~~~~~~~~~~~~~~~~~~i~cE~p~~~ly~f~g~l~~~~~~~pl~~~~~Llrg~~lrNT~~v~G~vv~t 252 (1151)
T KOG0206|consen 173 GETNLKVKQALECTSKLDSEDSLKNFKGWIECEDPNANLYTFVGNLELQGQIYPLSPDNLLLRGSRLRNTEWVYGVVVFT 252 (1151)
T ss_pred CccccceeeehhhhhcccccccccccCCceEEcCCcccHhhhhhheeeccCCCCCcHHHcccCCceeccCcEEEEEEEEc
Confidence 999876664 11235778888887 4589999999
Q ss_pred cccchhHHHHHHhccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccchhh---HHHHHH
Q 044020 110 GMRTEWGKLMETLNEGGEDETPLQVKLNGVATIIGKIELFFSVLEFLVLIGRFLGEKVIHNEFTDWSSADA---LTLIDY 186 (563)
Q Consensus 110 g~~t~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~ 186 (563)
|.+| +++++...++.+++++++..+.....+..+.+.++++..+...... ..+.......|+.... ...+..
T Consensus 253 G~dt---K~~~n~~~~~~Krs~ier~~n~~i~~~~~~l~~~~~~~~i~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (1151)
T KOG0206|consen 253 GHDT---KLMQNSGKPPSKRSRIERKMNKIIILLFVLLILMCLISAIGFAIWT--RQDGRHNGEWWYLSPSEAAYAGFVH 327 (1151)
T ss_pred CCcc---hHHHhcCCCccccchhhhhhhhhHHHHHHHHHHHHHHHHhhhheee--eecccccCchhhhcCchHHHHHHHH
Confidence 9999 5555666688999999999998777766665555555444322111 1110010123333321 233455
Q ss_pred HHHHHHhhhhccCCchHHHHHHHHHHHHH------HHh----hCCCeeecchhhhhcCCeeeeecccccccccCceEEEE
Q 044020 187 FAVVVTIIDVAVPEGLPLAVTLSLAFAMK------KLM----NDGALVRHLSACETMGSASCICTDKTRMLTTNHMVVDK 256 (563)
Q Consensus 187 ~~~~i~ili~~~P~~l~~~~~~~~~~~~~------~l~----~~~i~~k~~~~le~l~~v~~i~~DKTGTLT~~~~~v~~ 256 (563)
|..++.++...+|..|.+.+.+.-...+. .|. ...+.+|+.+.-|.||++++|+.|||||||.|.|++.+
T Consensus 328 f~t~~il~~~liPISLyvsiEiik~~qs~fi~~D~~my~~e~d~~~~~rtsnl~eeLGqv~yIfSDKTGTLT~N~M~F~k 407 (1151)
T KOG0206|consen 328 FLTFIILYQYLIPISLYVSIEIVKVLQSIFINNDLDMYDEETDTPAQARTSNLNEELGQVEYIFSDKTGTLTQNSMEFKK 407 (1151)
T ss_pred HHHHHhhhhceEEEEEEEEeeehHHHHHHHcchHHHhhhccCCCccccccCCchhhhcceeEEEEcCcCccccceeeeec
Confidence 66667777788999988877666544332 232 34688999999999999999999999999999999999
Q ss_pred EEEcCeeeeecCCCcc------c----------ccc------------ccccHHHHHHHHHHHHhccCCceeecCC--CC
Q 044020 257 IWIANTISNVEGNNRK------D----------ILQ------------SEISERVLDITLQAIFQNTGSKVVKDKD--GK 306 (563)
Q Consensus 257 i~~~~~~~~~~~~~~~------~----------~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~ 306 (563)
+.+.+..|........ . ... ..........+..++.+||+..+..+++ ..
T Consensus 408 Csi~g~~yg~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~f~~~la~chtv~~e~~~~~~~~ 487 (1151)
T KOG0206|consen 408 CSINGTSYGRNVTEVEAALAKRSGGDVNEHKIKGFTFEDSRLVDGLWSSEPQAEDILEFFRALALCHTVIPEKDEDSGKL 487 (1151)
T ss_pred ccccCcccccCCChhhcccCccccccccccccccceeccchhhccccccccCcchHHHHhhHHhccceeeeccCCCccce
Confidence 9999988865432210 0 000 0012234445667888888887776333 35
Q ss_pred ceecCCccHHHHHHHHHHcCCChHH------------HhhhceEEEEecCCCCceeEEEEEEcCCCeEEEEEeCChhHHH
Q 044020 307 NSILGTPTESAILEFGLRLGGDFEA------------QRREFKIVKVEPFNSVRKKMSVLIALPAGGMRAFCKGASEIVL 374 (563)
Q Consensus 307 ~~~~~~~~e~al~~~~~~~~~~~~~------------~~~~~~~~~~~~f~~~~~~~sviv~~~~~~~~~~~kG~~~~il 374 (563)
.+...+|+|.|+++.|+..|+.+-. ....|+++...+|++.||||||+++.+++.+.+|+||+...|+
T Consensus 488 ~Y~A~SPDE~AlV~aAr~~gf~f~~Rt~~~vti~~~g~~~~y~lL~iLeF~S~RKRMSVIVR~p~g~i~LycKGADsvI~ 567 (1151)
T KOG0206|consen 488 SYEAESPDEAALVEAARELGFVFLGRTPDSVTIRELGVEETYELLNVLEFNSTRKRMSVIVRDPDGRILLYCKGADSVIF 567 (1151)
T ss_pred eeecCCCcHHHHHHHHHhcCceeeeccCceEEEeccccceeEEEEEEeccccccceeEEEEEcCCCcEEEEEcCcchhhH
Confidence 6888999999999999999986532 2458999999999999999999999999999999999999999
Q ss_pred hcccccccCCCccccCCHHHHHHHHHHHHHHHHHHHhHhHhhhhccCCCCCCC-----------------------CCCC
Q 044020 375 SMCDKVVSDNGEPVPLSEEQFRNITDVINGFASEALRTLCLAFKDLNDSSNEN-----------------------NIPD 431 (563)
Q Consensus 375 ~~c~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~G~r~i~~a~~~l~~~~~~~-----------------------~~~~ 431 (563)
++++. -.+...++..++++.|+.+|+|++|+|||.+++++++. ..+|
T Consensus 568 erL~~----------~~~~~~e~T~~Hl~~yA~eGLRTLc~A~r~l~e~eY~~w~~~~~~A~ts~~~Re~~L~e~ae~iE 637 (1151)
T KOG0206|consen 568 ERLSK----------NGEKLREKTQEHLEEYATEGLRTLCLAYRELDEEEYEEWNERYNEAKTSLTDREELLDEVAEEIE 637 (1151)
T ss_pred hhhhh----------cchHHHHHHHHHHHHHHhhhhhHhhhhhhccCHHHHHHHHHHHHHHHhhccCHHHHHHHHHHHHH
Confidence 99874 23456677888999999999999999999999886321 4779
Q ss_pred CCceEEEEecccCCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCC-----------------------
Q 044020 432 SGYTLIAVVGIKDPVRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAKECGILTSD----------------------- 488 (563)
Q Consensus 432 ~~~~~lG~i~~~d~~~~~~~~~I~~l~~~gi~v~i~TGd~~~~a~~~a~~lgi~~~~----------------------- 488 (563)
+|+.++|..+++|+++++++++|+.|+++|||+|++|||..++|..++..|++.+.+
T Consensus 638 k~L~LLGATAIEDkLQdgVPetI~~L~~AGIKIWVLTGDK~ETAiNIg~sC~Ll~~~m~~i~i~~~~~~~~~~~~~~~~~ 717 (1151)
T KOG0206|consen 638 KDLILLGATAIEDKLQDGVPETIAKLAQAGIKIWVLTGDKQETAINIGYSCRLLRQDMKLIIINTETSEELSSLDATAAL 717 (1151)
T ss_pred hcchhhcceeeechhccCchHHHHHHHHcCCEEEEEcCcHHHHHHHHHHhhcCCCCCceEEEEecCChhhhcchhhHHHH
Confidence 999999999999999999999999999999999999999999999999999987642
Q ss_pred ------------------------CceeechhhhcCCCC---------CCCcceeEEEecChhhHHHHHHHHHHhcCCEE
Q 044020 489 ------------------------GEAVEGPEFRNMSPA---------DIIPKLQVMARSLPSDKHTLVTQLRNTFGEVV 535 (563)
Q Consensus 489 ------------------------~~~~~g~~~~~~~~~---------~~~~~~~v~~~~~p~~K~~~v~~l~~~~g~~v 535 (563)
..+++|+.+....+. ...++..+.||++|.||+.+++..++..+..+
T Consensus 718 ~~~l~~~~~~~~~~~~~~~~~~~~aLVIDGktl~~aL~~~~~~~Fl~la~~C~sViCCR~sPlQKA~Vv~lVk~~~~~~T 797 (1151)
T KOG0206|consen 718 KETLLRKFTEELEEAKLEHSEKPFALVIDGKTLAYALEDELRKKFLELAKRCKSVICCRVSPLQKALVVKLVKKGLKAVT 797 (1151)
T ss_pred HHHHHHhhhHHHHHHhhccCcCCceEEEECHHHHhhhCchhhHHHHHHHHhcCEEEEccCCHHHHHHHHHHHHhcCCceE
Confidence 234444444332222 23466779999999999999999987778999
Q ss_pred EEEcCCccCHHHHhhCCceEeecCCCC
Q 044020 536 AVTGDGTNDASALHEADIGLAMGIAGT 562 (563)
Q Consensus 536 ~~iGDg~ND~~~l~~a~vgiamg~~~~ 562 (563)
++||||.||++|++.||||| |++|.
T Consensus 798 LAIGDGANDVsMIQ~AhVGV--GIsG~ 822 (1151)
T KOG0206|consen 798 LAIGDGANDVSMIQEAHVGV--GISGQ 822 (1151)
T ss_pred EEeeCCCccchheeeCCcCe--eeccc
Confidence 99999999999999999999 44554
|
|
| >KOG0210 consensus P-type ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-63 Score=498.15 Aligned_cols=521 Identities=24% Similarity=0.344 Sum_probs=402.5
Q ss_pred chhhHHHHHHHHHHHHHHHhccCeeEEE-ECCEEEEeecCCcccCcEEEeCCCCeeeceEEEEeeC----ceEEEeccCc
Q 044020 2 VTAISDYKQSLQFRDLDREKKKIFIQVT-RDGQRQKVCTYDLVVGDIVHLSIGDQVPAYGIFISGH----SLLIDESSLS 76 (563)
Q Consensus 2 ~~~~~~~~~~~~~~~l~~~~~~~~~~V~-r~g~~~~i~~~~L~~GDiI~v~~G~~iPaD~~ll~g~----~l~Vdes~lT 76 (563)
++.++|..++.+++..++..|+...++. |+|.... +++++++||+|++.++++||||.+++..+ .|.|.+-.|+
T Consensus 141 itl~keavdd~~r~~rd~~~Nse~y~~ltr~~~~~~-~Ss~i~vGDvi~v~K~~RVPADmilLrTsd~sg~~FiRTDQLD 219 (1051)
T KOG0210|consen 141 ITLIKEAVDDLKRRRRDRELNSEKYTKLTRDGTRRE-PSSDIKVGDVIIVHKDERVPADMILLRTSDKSGSCFIRTDQLD 219 (1051)
T ss_pred HHHHHHHHHHHHHHHhhhhhhhhhheeeccCCcccc-cccccccccEEEEecCCcCCcceEEEEccCCCCceEEeccccC
Confidence 6778899999999999999888776555 7776544 99999999999999999999999999754 3799999999
Q ss_pred CCCCccccc----------------------------------------------CCCCeEEecceeecCcEEEEEEEEc
Q 044020 77 GQSEPRYMY----------------------------------------------EENPFLLAGTKVQGGSGKMLVTTVG 110 (563)
Q Consensus 77 Ges~p~~k~----------------------------------------------~~~~~i~~Gt~v~~g~~~~~V~~tg 110 (563)
||++-+.|. .-+|.+.++|.+.+|.+.++|++||
T Consensus 220 GETDWKLrl~vp~tQ~l~~~~el~~i~v~Ae~P~kdIh~F~Gt~~~~d~~~~~~LsventLWanTVvAs~t~~gvVvYTG 299 (1051)
T KOG0210|consen 220 GETDWKLRLPVPRTQHLTEDSELMEISVYAEKPQKDIHSFVGTFTITDSDKPESLSVENTLWANTVVASGTAIGVVVYTG 299 (1051)
T ss_pred CcccceeeccchhhccCCcccchheEEEeccCcchhhHhhEEEEEEecCCCCCcccccceeeeeeeEecCcEEEEEEEec
Confidence 998633321 1245799999999999999999999
Q ss_pred ccchhHHHHHHhccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccchhhHHHHHHHHHH
Q 044020 111 MRTEWGKLMETLNEGGEDETPLQVKLNGVATIIGKIELFFSVLEFLVLIGRFLGEKVIHNEFTDWSSADALTLIDYFAVV 190 (563)
Q Consensus 111 ~~t~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (563)
.+|+. ..+...++.+-..++..++.+.+++....++++++....- +-...| ...+..+
T Consensus 300 ~dtRs---vMNts~pr~KvGllelEiN~ltKiL~~~vlvLs~vmv~~~-----------g~~~~w--------yi~~~Rf 357 (1051)
T KOG0210|consen 300 RDTRS---VMNTSRPRSKVGLLELEINGLTKILFCFVLVLSIVMVAMK-----------GFGSDW--------YIYIIRF 357 (1051)
T ss_pred ccHHH---HhccCCcccccceeeeecccHHHHHHHHHHHHHHHHHHhh-----------cCCCch--------HHHHHHH
Confidence 99952 3333445677778888999999988777666555433221 111234 3345555
Q ss_pred HHhhhhccCCchHHHHHHHHHHHHHHHhh----CCCeeecchhhhhcCCeeeeecccccccccCceEEEEEEEcCeeeee
Q 044020 191 VTIIDVAVPEGLPLAVTLSLAFAMKKLMN----DGALVRHLSACETMGSASCICTDKTRMLTTNHMVVDKIWIANTISNV 266 (563)
Q Consensus 191 i~ili~~~P~~l~~~~~~~~~~~~~~l~~----~~i~~k~~~~le~l~~v~~i~~DKTGTLT~~~~~v~~i~~~~~~~~~ 266 (563)
+.++...+|..|-+.+.++-..-.....+ .|..+|+....|.||++.++.+|||||||+|+|.+++++.+.-.|..
T Consensus 358 llLFS~IIPISLRvnlDmaK~~ys~~i~~D~~IpgtvvRSstIPEeLGRIsylLtDKTGTLTqNEM~~KKiHLGTv~~s~ 437 (1051)
T KOG0210|consen 358 LLLFSSIIPISLRVNLDMAKIVYSWQIEHDKNIPGTVVRSSTIPEELGRISYLLTDKTGTLTQNEMEFKKIHLGTVAYSA 437 (1051)
T ss_pred HHHHhhhceeEEEEehhHHHhhHhhhcccCCCCCceeeecCCChHHhcceEEEEecCcCccccchheeeeeeeeeeeccH
Confidence 55556667888877777776554444433 37889999999999999999999999999999999999987666543
Q ss_pred cCCCccc----------------cc--cccccHHHHHHHHHHHHhccCCceeecCCC-CceecCCccHHHHHHHHHHcCC
Q 044020 267 EGNNRKD----------------IL--QSEISERVLDITLQAIFQNTGSKVVKDKDG-KNSILGTPTESAILEFGLRLGG 327 (563)
Q Consensus 267 ~~~~~~~----------------~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~e~al~~~~~~~~~ 327 (563)
+..+..+ .. .......-..-+..++..||...++.++++ ..+...+|+|.|+++|.+..|.
T Consensus 438 e~~~eV~~~i~s~~~~~~~~~~~~~~~~k~~~s~rv~~~V~alalCHNVTPv~e~~ge~sYQAaSPDEVAiVkwTe~VGl 517 (1051)
T KOG0210|consen 438 ETMDEVSQHIQSLYTPGRNKGKGALSRVKKDMSARVRNAVLALALCHNVTPVFEDDGEVSYQAASPDEVAIVKWTETVGL 517 (1051)
T ss_pred hHHHHHHHHHHHhhCCCcccccccchhhcCcccHHHHHHHHHHHHhccCCcccCCCceEEeecCCCCeEEEEEeeeecce
Confidence 3211100 00 001111222334567788888888888775 4588899999999999988876
Q ss_pred ChHH-------------HhhhceEEEEecCCCCceeEEEEEEcC-CCeEEEEEeCChhHHHhcccccccCCCccccCCHH
Q 044020 328 DFEA-------------QRREFKIVKVEPFNSVRKKMSVLIALP-AGGMRAFCKGASEIVLSMCDKVVSDNGEPVPLSEE 393 (563)
Q Consensus 328 ~~~~-------------~~~~~~~~~~~~f~~~~~~~sviv~~~-~~~~~~~~kG~~~~il~~c~~~~~~~~~~~~~~~~ 393 (563)
.... ...+|++++.|||+|+.|||+++|+++ .++++.|.||+...|-.....
T Consensus 518 ~L~~Rd~~~itL~~~~~~~~~yqIL~vFPFtsEtKRMGIIVr~e~~~evtfylKGAD~VMs~iVq~-------------- 583 (1051)
T KOG0210|consen 518 KLAKRDRHAITLRVPLDDELNYQILQVFPFTSETKRMGIIVRDETTEEVTFYLKGADVVMSGIVQY-------------- 583 (1051)
T ss_pred EEeecccceEEEecCCCcceeEEEEEEeccccccceeeEEEecCCCceEEEEEecchHHHhccccc--------------
Confidence 5432 234899999999999999999999987 588999999997777433321
Q ss_pred HHHHHHHHHHHHHHHHHhHhHhhhhccCCCCCCC------------------------CCCCCCceEEEEecccCCCCcc
Q 044020 394 QFRNITDVINGFASEALRTLCLAFKDLNDSSNEN------------------------NIPDSGYTLIAVVGIKDPVRPG 449 (563)
Q Consensus 394 ~~~~i~~~~~~~~~~G~r~i~~a~~~l~~~~~~~------------------------~~~~~~~~~lG~i~~~d~~~~~ 449 (563)
-+++++...+++++|+|++.+|.|.|+..+++. ..+|.|+.++|+.+.+|+++++
T Consensus 584 -NdWleEE~gNMAREGLRtLVvakK~Ls~~eye~Fe~~y~~A~lSi~dR~~~ma~vv~~~LE~dlelL~LTGVEDkLQ~d 662 (1051)
T KOG0210|consen 584 -NDWLEEECGNMAREGLRTLVVAKKVLSEEEYEAFEEAYNAAKLSISDRDQKMANVVERYLERDLELLGLTGVEDKLQDD 662 (1051)
T ss_pred -chhhhhhhhhhhhhcceEEEEEecccCHHHHHHHHHHHHhhhCccchHHHHHHHHHHHHHHhhhHHhcccChHHHHhhh
Confidence 146677889999999999999999999876221 2678999999999999999999
Q ss_pred hHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCC----------------------------CceeechhhhcCC
Q 044020 450 VKEAVQTCLEAGITVRMVTGDNINTARAIAKECGILTSD----------------------------GEAVEGPEFRNMS 501 (563)
Q Consensus 450 ~~~~I~~l~~~gi~v~i~TGd~~~~a~~~a~~lgi~~~~----------------------------~~~~~g~~~~~~~ 501 (563)
++.+++.|+++||++||+|||..++|..+|+..++.+.+ ..+++|+.++-..
T Consensus 663 Vk~tLElLRNAgikiWMLTGDKlETA~ciAkSs~L~sR~q~ihv~~~v~sr~dah~eL~~lR~k~~~aLvi~G~Sl~~cl 742 (1051)
T KOG0210|consen 663 VKPTLELLRNAGIKIWMLTGDKLETAICIAKSSRLFSRGQYIHVIRSVTSRGDAHNELNNLRRKTDCALVIDGESLEFCL 742 (1051)
T ss_pred hHhHHHHHhhcCcEEEEEcCcchhheeeeehhccceecCceEEEEEecCCchHHHHHHHHhhcCCCcEEEEcCchHHHHH
Confidence 999999999999999999999999999999999987632 3456665443221
Q ss_pred C----C----CCCcceeEEEecChhhHHHHHHHHHHhcCCEEEEEcCCccCHHHHhhCCceEeecCCCC
Q 044020 502 P----A----DIIPKLQVMARSLPSDKHTLVTQLRNTFGEVVAVTGDGTNDASALHEADIGLAMGIAGT 562 (563)
Q Consensus 502 ~----~----~~~~~~~v~~~~~p~~K~~~v~~l~~~~g~~v~~iGDg~ND~~~l~~a~vgiamg~~~~ 562 (563)
+ + ..-....+.||++|.||+++++.+|++.|..|++||||.||++|+++||+|| |+-|.
T Consensus 743 ~yye~Ef~el~~~~~aVv~CRctPtQKA~v~~llq~~t~krvc~IGDGGNDVsMIq~A~~Gi--GI~gk 809 (1051)
T KOG0210|consen 743 KYYEDEFIELVCELPAVVCCRCTPTQKAQVVRLLQKKTGKRVCAIGDGGNDVSMIQAADVGI--GIVGK 809 (1051)
T ss_pred HHHHHHHHHHHHhcCcEEEEecChhHHHHHHHHHHHhhCceEEEEcCCCccchheeecccce--eeecc
Confidence 1 1 1223456899999999999999999988999999999999999999999999 44443
|
|
| >COG2216 KdpB High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-57 Score=442.18 Aligned_cols=453 Identities=25% Similarity=0.340 Sum_probs=356.8
Q ss_pred hhhHHHHHHHHHHHHHHHhccCeeEEEEC-CEEEEeecCCcccCcEEEeCCCCeeeceEEEEeeCceEEEeccCcCCCCc
Q 044020 3 TAISDYKQSLQFRDLDREKKKIFIQVTRD-GQRQKVCTYDLVVGDIVHLSIGDQVPAYGIFISGHSLLIDESSLSGQSEP 81 (563)
Q Consensus 3 ~~~~~~~~~~~~~~l~~~~~~~~~~V~r~-g~~~~i~~~~L~~GDiI~v~~G~~iPaD~~ll~g~~l~Vdes~lTGes~p 81 (563)
+++.|-+-+.|...|.+.......+++++ |.++.+++.+|+.||+|.|+.||+||+||.+++|.+ +||||++||||.|
T Consensus 83 Ea~AEGrgKAqAdsLr~~~~~~~A~~l~~~g~~~~v~st~Lk~gdiV~V~age~IP~DGeVIeG~a-sVdESAITGESaP 161 (681)
T COG2216 83 EAVAEGRGKAQADSLRKTKTETIARLLRADGSIEMVPATELKKGDIVLVEAGEIIPSDGEVIEGVA-SVDESAITGESAP 161 (681)
T ss_pred HHHHcccchHHHHHHHHHHHHHHHHHhcCCCCeeeccccccccCCEEEEecCCCccCCCeEEeeee-ecchhhccCCCcc
Confidence 34455555666666766655556777776 899999999999999999999999999999999988 9999999999999
Q ss_pred ccccCCCCe--EEecceeecCcEEEEEEEEcccchhHHHHHHhccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 044020 82 RYMYEENPF--LLAGTKVQGGSGKMLVTTVGMRTEWGKLMETLNEGGEDETPLQVKLNGVATIIGKIELFFSVLEFLVLI 159 (563)
Q Consensus 82 ~~k~~~~~~--i~~Gt~v~~g~~~~~V~~tg~~t~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 159 (563)
+.|..|+++ |-.||.+++.+++++++....+|++.|+..+++.++.+++|-+-.+..+..-+. ++|-+++.-++.
T Consensus 162 ViresGgD~ssVtGgT~v~SD~l~irita~pG~sFlDrMI~LVEgA~R~KTPNEIAL~iLL~~LT---liFL~~~~Tl~p 238 (681)
T COG2216 162 VIRESGGDFSSVTGGTRVLSDWLKIRITANPGETFLDRMIALVEGAERQKTPNEIALTILLSGLT---LIFLLAVATLYP 238 (681)
T ss_pred eeeccCCCcccccCCcEEeeeeEEEEEEcCCCccHHHHHHHHhhchhccCChhHHHHHHHHHHHH---HHHHHHHHhhhh
Confidence 999877432 889999999999999999999999999999999999999998865543222111 111111111111
Q ss_pred HHHhhccccccccccccchhhHHHHHHHHHHHHhhhhccCCchHHHHHHHHHHHHHHHhhCCCeeecchhhhhcCCeeee
Q 044020 160 GRFLGEKVIHNEFTDWSSADALTLIDYFAVVVTIIDVAVPEGLPLAVTLSLAFAMKKLMNDGALVRHLSACETMGSASCI 239 (563)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ili~~~P~~l~~~~~~~~~~~~~~l~~~~i~~k~~~~le~l~~v~~i 239 (563)
+..|.. .. .-.+...+.++++.+|..+.-.++.-=..++.|+.+.|++-++.++.|..|.+|++
T Consensus 239 ----~a~y~~--------g~----~~~i~~LiALlV~LIPTTIGgLLsAIGIAGMdRv~~~NViA~SGRAVEaaGDvdtl 302 (681)
T COG2216 239 ----FAIYSG--------GG----AASVTVLVALLVCLIPTTIGGLLSAIGIAGMDRVTQFNVIATSGRAVEAAGDVDTL 302 (681)
T ss_pred ----HHHHcC--------CC----CcCHHHHHHHHHHHhcccHHHHHHHhhhhhhhHhhhhceeecCcchhhhcCCccEE
Confidence 111100 00 01244567788888999888777777778999999999999999999999999999
Q ss_pred ecccccccccCceEEEEEEEcCeeeeecCCCccccccccccHHHHHHHHHHHHhccCCceeecCCCCceecCCccHHHHH
Q 044020 240 CTDKTRMLTTNHMVVDKIWIANTISNVEGNNRKDILQSEISERVLDITLQAIFQNTGSKVVKDKDGKNSILGTPTESAIL 319 (563)
Q Consensus 240 ~~DKTGTLT~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~al~ 319 (563)
+.|||||+|.|+-.-+++++.+... .+++.+....+ +-. -..|..++++
T Consensus 303 iLDKTGTIT~GnR~A~~f~p~~gv~---------------~~~la~aa~ls----Sl~------------DeTpEGrSIV 351 (681)
T COG2216 303 LLDKTGTITLGNRQASEFIPVPGVS---------------EEELADAAQLA----SLA------------DETPEGRSIV 351 (681)
T ss_pred EecccCceeecchhhhheecCCCCC---------------HHHHHHHHHHh----hhc------------cCCCCcccHH
Confidence 9999999999998888887766541 12222221111 111 1278889999
Q ss_pred HHHHHcCCChHHHhhhceEEEEecCCCCceeEEEEEEcCCCeEEEEEeCChhHHHhcccccccCCCccccCCHHHHHHHH
Q 044020 320 EFGLRLGGDFEAQRREFKIVKVEPFNSVRKKMSVLIALPAGGMRAFCKGASEIVLSMCDKVVSDNGEPVPLSEEQFRNIT 399 (563)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~sviv~~~~~~~~~~~kG~~~~il~~c~~~~~~~~~~~~~~~~~~~~i~ 399 (563)
+++++.+.+.+.....- ....+||+.+.|++.+-... + .-+-||+.+.+....+. .+| . ..+.+.
T Consensus 352 ~LA~~~~~~~~~~~~~~-~~~fvpFtA~TRmSGvd~~~--~--~~irKGA~dai~~~v~~---~~g-~------~p~~l~ 416 (681)
T COG2216 352 ELAKKLGIELREDDLQS-HAEFVPFTAQTRMSGVDLPG--G--REIRKGAVDAIRRYVRE---RGG-H------IPEDLD 416 (681)
T ss_pred HHHHHhccCCCcccccc-cceeeecceecccccccCCC--C--ceeecccHHHHHHHHHh---cCC-C------CCHHHH
Confidence 99999886554332211 34678999988877665432 2 56679999999877652 111 1 124567
Q ss_pred HHHHHHHHHHHhHhHhhhhccCCCCCCCCCCCCCceEEEEecccCCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHH
Q 044020 400 DVINGFASEALRTLCLAFKDLNDSSNENNIPDSGYTLIAVVGIKDPVRPGVKEAVQTCLEAGITVRMVTGDNINTARAIA 479 (563)
Q Consensus 400 ~~~~~~~~~G~r~i~~a~~~l~~~~~~~~~~~~~~~~lG~i~~~d~~~~~~~~~I~~l~~~gi~v~i~TGd~~~~a~~~a 479 (563)
...++.++.|-..++++ .|..++|.+.++|-++|+.+|-+.+||+.||+.+|+|||++.+|..+|
T Consensus 417 ~~~~~vs~~GGTPL~V~---------------~~~~~~GVI~LkDivK~Gi~ERf~elR~MgIkTvM~TGDN~~TAa~IA 481 (681)
T COG2216 417 AAVDEVSRLGGTPLVVV---------------ENGRILGVIYLKDIVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIA 481 (681)
T ss_pred HHHHHHHhcCCCceEEE---------------ECCEEEEEEEehhhcchhHHHHHHHHHhcCCeEEEEeCCCHHHHHHHH
Confidence 78888899999998887 456999999999999999999999999999999999999999999999
Q ss_pred HHcCCCCCCCceeechhhhcCCCCCCCcceeEEEecChhhHHHHHHHHHHhcCCEEEEEcCCccCHHHHhhCCceEeecC
Q 044020 480 KECGILTSDGEAVEGPEFRNMSPADIIPKLQVMARSLPSDKHTLVTQLRNTFGEVVAVTGDGTNDASALHEADIGLAMGI 559 (563)
Q Consensus 480 ~~lgi~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~~~~g~~v~~iGDg~ND~~~l~~a~vgiamg~ 559 (563)
++.|++. +.++++|++|.++++.-|.+ |+-|+|+|||.||.|+|.+||||+||.
T Consensus 482 ~EAGVDd------------------------fiAeatPEdK~~~I~~eQ~~-grlVAMtGDGTNDAPALAqAdVg~AMN- 535 (681)
T COG2216 482 AEAGVDD------------------------FIAEATPEDKLALIRQEQAE-GRLVAMTGDGTNDAPALAQADVGVAMN- 535 (681)
T ss_pred HHhCchh------------------------hhhcCChHHHHHHHHHHHhc-CcEEEEcCCCCCcchhhhhcchhhhhc-
Confidence 9999997 99999999999999999999 999999999999999999999999998
Q ss_pred CCC
Q 044020 560 AGT 562 (563)
Q Consensus 560 ~~~ 562 (563)
+|+
T Consensus 536 sGT 538 (681)
T COG2216 536 SGT 538 (681)
T ss_pred ccc
Confidence 876
|
|
| >PF00122 E1-E2_ATPase: E1-E2 ATPase p-type cation-transporting ATPase superfamily signature H+-transporting ATPase (proton pump) signature sodium/potassium-transporting ATPase signature; InterPro: IPR008250 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-35 Score=283.23 Aligned_cols=213 Identities=32% Similarity=0.520 Sum_probs=174.5
Q ss_pred hhhHHHHHHHHHHHHHHHh---ccCe-eEEEECCEEEEeecCCcccCcEEEeCCCCeeeceEEEEe-eCceEEEeccCcC
Q 044020 3 TAISDYKQSLQFRDLDREK---KKIF-IQVTRDGQRQKVCTYDLVVGDIVHLSIGDQVPAYGIFIS-GHSLLIDESSLSG 77 (563)
Q Consensus 3 ~~~~~~~~~~~~~~l~~~~---~~~~-~~V~r~g~~~~i~~~~L~~GDiI~v~~G~~iPaD~~ll~-g~~l~Vdes~lTG 77 (563)
+.+.+++++++.++..+.+ .+.+ ++|.|||+++.+++++|+|||||.+++||++||||+|++ |. ++||||.+||
T Consensus 9 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~r~~~~~~i~~~~L~~GDiI~l~~g~~vPaD~~ll~~g~-~~vd~s~ltG 87 (230)
T PF00122_consen 9 SNIIEIWQEYRSKKQLKKLNNLNPQKKVTVIRDGRWQKIPSSELVPGDIIILKAGDIVPADGILLESGS-AYVDESALTG 87 (230)
T ss_dssp HHHHHHHHHHHHHHHHHHHCTTSSSEEEEEEETTEEEEEEGGGT-TTSEEEEETTEBESSEEEEEESSE-EEEECHHHHS
T ss_pred HHHHHHHHHHHHHHHHHHHhccCCCccEEEEeccccccchHhhccceeeeecccccccccCccceeccc-cccccccccc
Confidence 3444555555544444433 2334 999999999999999999999999999999999999999 65 5999999999
Q ss_pred CCCcccccC----CCCeEEecceeecCcEEEEEEEEcccchhHHHHHHhccCCCCCCchHHHHHHHHHHHHHHHHHHHHH
Q 044020 78 QSEPRYMYE----ENPFLLAGTKVQGGSGKMLVTTVGMRTEWGKLMETLNEGGEDETPLQVKLNGVATIIGKIELFFSVL 153 (563)
Q Consensus 78 es~p~~k~~----~~~~i~~Gt~v~~g~~~~~V~~tg~~t~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 153 (563)
|+.|+.|.. .++++|+||.+.+|++.++|++||.+|..+++.+...+.+.+++++++.++++..++.++.++++++
T Consensus 88 es~pv~k~~~~~~~~~~i~~Gs~v~~g~~~~~Vi~tG~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (230)
T PF00122_consen 88 ESEPVKKTPLPLNPGNIIFAGSIVVSGWGIGVVIATGSDTKLGRILQLVSKSESKKSPLERKLNKIAKILIIIILAIAIL 167 (230)
T ss_dssp BSSEEEESSSCCCTTTEE-TTEEEEEEEEEEEEEE-GGGSHHHHHHHHHHTSCSS-THHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccccccccccccccchhhccccccccccccccceeeecccccccccccccccccchhhhhhhHHHHHHHHhcccccchh
Confidence 999999971 4567999999999999999999999999999999998888888999999999999998887776666
Q ss_pred HHHHHHHHHhhccccccccccccchhhHHHHHHHHHHHHhhhhccCCchHHHHHHHHHHHHHHHhhCCCeeecchhhhh
Q 044020 154 EFLVLIGRFLGEKVIHNEFTDWSSADALTLIDYFAVVVTIIDVAVPEGLPLAVTLSLAFAMKKLMNDGALVRHLSACET 232 (563)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ili~~~P~~l~~~~~~~~~~~~~~l~~~~i~~k~~~~le~ 232 (563)
++++++.. ....++...+..++++++.+||++|++++++++..+.++|.++|+++|+++++|.
T Consensus 168 ~~~~~~~~----------------~~~~~~~~~~~~~i~~l~~~~P~~l~~~~~~~~~~~~~~~~~~~i~v~~~~a~E~ 230 (230)
T PF00122_consen 168 VFIIWFFN----------------DSGISFFKSFLFAISLLIVLIPCALPLALPLSLAIAARRLAKNGIIVKNLSALEA 230 (230)
T ss_dssp HHHHCHTG----------------STTCHCCHHHHHHHHHHHHHS-TTHHHHHHHHHHHHHHHHHHTTEEESSTTHHHH
T ss_pred hhccceec----------------ccccccccccccccceeeeecccceeehHHHHHHHHHHHHHHCCEEEeCcccccC
Confidence 66443221 0112456678888999999999999999999999999999999999999999984
|
ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the actuator (A) domain, and some transmembrane helices found in P-type ATPases []. It contains the TGES-loop which is essential for the metal ion binding which results in tight association between the A and P (phosphorylation) domains []. It does not contain the phosphorylation site. It is thought that the large movement of the actuator domain, which is transmitted to the transmembrane helices, is essential to the long distance coupling between formation/decomposition of the acyl phosphate in the cytoplasmic P-domain and the changes in the ion-binding sites buried deep in the membranous region []. This domain has a modulatory effect on the phosphoenzyme processing steps through its nucleotide binding [],[]. P-type (or E1-E2-type) ATPases that form an aspartyl phosphate intermediate in the course of ATP hydrolysis, can be divided into 4 major groups []: (1) Ca2+-transporting ATPases; (2) Na+/K+- and gastric H+/K+-transporting ATPases; (3) plasma membrane H+-transporting ATPases (proton pumps) of plants, fungi and lower eukaryotes; and (4) all bacterial P-type ATPases, except the g2+-ATPase of Salmonella typhimurium, which is more similar to the eukaryotic sequences. However, great variety of sequence analysis methods results in diversity of classification. More information about this protein can be found at Protein of the Month: ATP Synthases [].; GO: 0000166 nucleotide binding, 0046872 metal ion binding; PDB: 2XZB_A 1MHS_B 3TLM_A 3A3Y_A 2ZXE_A 3NAL_A 3NAM_A 3NAN_A 2YJ6_B 2IYE_A .... |
| >PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase) | Back alignment and domain information |
|---|
Probab=99.88 E-value=5.5e-23 Score=194.92 Aligned_cols=97 Identities=45% Similarity=0.679 Sum_probs=90.9
Q ss_pred CceEEEEecccCCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCceeechhhhcCCCCCCCcceeEE
Q 044020 433 GYTLIAVVGIKDPVRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAKECGILTSDGEAVEGPEFRNMSPADIIPKLQVM 512 (563)
Q Consensus 433 ~~~~lG~i~~~d~~~~~~~~~I~~l~~~gi~v~i~TGd~~~~a~~~a~~lgi~~~~~~~~~g~~~~~~~~~~~~~~~~v~ 512 (563)
++.++|.+.+.|++++++.++|+.|+++|++++|+|||+..++..+++++||.. ..+|
T Consensus 115 ~~~~~~~~~~~d~~~~~~~~~l~~L~~~Gi~~~i~TGD~~~~a~~~~~~lgi~~----------------------~~v~ 172 (215)
T PF00702_consen 115 NLIFLGLFGLRDPLRPGAKEALQELKEAGIKVAILTGDNESTASAIAKQLGIFD----------------------SIVF 172 (215)
T ss_dssp SHEEEEEEEEEEEBHTTHHHHHHHHHHTTEEEEEEESSEHHHHHHHHHHTTSCS----------------------EEEE
T ss_pred cCeEEEEEeecCcchhhhhhhhhhhhccCcceeeeecccccccccccccccccc----------------------cccc
Confidence 569999999999999999999999999999999999999999999999999953 2389
Q ss_pred Eec--ChhhH--HHHHHHHHHhcCCEEEEEcCCccCHHHHhhCC
Q 044020 513 ARS--LPSDK--HTLVTQLRNTFGEVVAVTGDGTNDASALHEAD 552 (563)
Q Consensus 513 ~~~--~p~~K--~~~v~~l~~~~g~~v~~iGDg~ND~~~l~~a~ 552 (563)
++. +|++| ..+++.|+.. +++|+|+|||.||++|+++||
T Consensus 173 a~~~~kP~~k~~~~~i~~l~~~-~~~v~~vGDg~nD~~al~~Ag 215 (215)
T PF00702_consen 173 ARVIGKPEPKIFLRIIKELQVK-PGEVAMVGDGVNDAPALKAAG 215 (215)
T ss_dssp ESHETTTHHHHHHHHHHHHTCT-GGGEEEEESSGGHHHHHHHSS
T ss_pred ccccccccchhHHHHHHHHhcC-CCEEEEEccCHHHHHHHHhCc
Confidence 999 99999 9999999966 669999999999999999997
|
This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J .... |
| >COG4087 Soluble P-type ATPase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.52 E-value=6.4e-14 Score=113.56 Aligned_cols=100 Identities=25% Similarity=0.392 Sum_probs=93.7
Q ss_pred ceEEEEecccCCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCceeechhhhcCCCCCCCcceeEEE
Q 044020 434 YTLIAVVGIKDPVRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAKECGILTSDGEAVEGPEFRNMSPADIIPKLQVMA 513 (563)
Q Consensus 434 ~~~lG~i~~~d~~~~~~~~~I~~l~~~gi~v~i~TGd~~~~a~~~a~~lgi~~~~~~~~~g~~~~~~~~~~~~~~~~v~~ 513 (563)
....++|+---++-++++++|++|++. ++++++|||...+....|+-.|++... +|+
T Consensus 19 ~~v~~tiatgGklf~ev~e~iqeL~d~-V~i~IASgDr~gsl~~lae~~gi~~~r----------------------v~a 75 (152)
T COG4087 19 GKVLYTIATGGKLFSEVSETIQELHDM-VDIYIASGDRKGSLVQLAEFVGIPVER----------------------VFA 75 (152)
T ss_pred ceEEEEEccCcEEcHhhHHHHHHHHHh-heEEEecCCcchHHHHHHHHcCCceee----------------------eec
Confidence 467899999999999999999999999 999999999999999999999987643 899
Q ss_pred ecChhhHHHHHHHHHHhcCCEEEEEcCCccCHHHHhhCCceEee
Q 044020 514 RSLPSDKHTLVTQLRNTFGEVVAVTGDGTNDASALHEADIGLAM 557 (563)
Q Consensus 514 ~~~p~~K~~~v~~l~~~~g~~v~~iGDg~ND~~~l~~a~vgiam 557 (563)
...|+.|.++++.|+.. ++.|+|+|||.||.+||+.||+||+.
T Consensus 76 ~a~~e~K~~ii~eLkk~-~~k~vmVGnGaND~laLr~ADlGI~t 118 (152)
T COG4087 76 GADPEMKAKIIRELKKR-YEKVVMVGNGANDILALREADLGICT 118 (152)
T ss_pred ccCHHHHHHHHHHhcCC-CcEEEEecCCcchHHHhhhcccceEE
Confidence 99999999999999987 89999999999999999999999875
|
|
| >PF13246 Hydrolase_like2: Putative hydrolase of sodium-potassium ATPase alpha subunit | Back alignment and domain information |
|---|
Probab=99.51 E-value=6.7e-14 Score=111.83 Aligned_cols=85 Identities=38% Similarity=0.667 Sum_probs=69.3
Q ss_pred ccCCceeecCCCC-ceecCCccHHHHHHHHHHc--CCChHHHhhhceEEEEecCCCCceeEEEEEEcCCCeEEEEEeCCh
Q 044020 294 NTGSKVVKDKDGK-NSILGTPTESAILEFGLRL--GGDFEAQRREFKIVKVEPFNSVRKKMSVLIALPAGGMRAFCKGAS 370 (563)
Q Consensus 294 ~~~~~~~~~~~~~-~~~~~~~~e~al~~~~~~~--~~~~~~~~~~~~~~~~~~f~~~~~~~sviv~~~~~~~~~~~kG~~ 370 (563)
|+.+.+..+.+.. ....|+|+|.||+.++.+. +.+....+..+++++.+||+|+||+|+++++ .++.+.+++||+|
T Consensus 3 Cn~a~~~~~~~~~~~~~~G~ptE~ALl~~~~~~g~~~~~~~~~~~~~~~~~~pF~S~rK~msvv~~-~~~~~~~~~KGA~ 81 (91)
T PF13246_consen 3 CNDAEIEYDDESKTEEIIGDPTEKALLRFAKKLGVGIDIKEIRSKYKIVAEIPFDSERKRMSVVVR-NDGKYILYVKGAP 81 (91)
T ss_pred ccccEeecCCCCccccccCCcCHHHHHHHHHHcCCCCcHHHHHhhcceeEEEccCcccceeEEEEe-CCCEEEEEcCCCh
Confidence 4444443333322 2388999999999999999 5577889999999999999999999999999 3345777999999
Q ss_pred hHHHhcccc
Q 044020 371 EIVLSMCDK 379 (563)
Q Consensus 371 ~~il~~c~~ 379 (563)
|.|+++|++
T Consensus 82 e~il~~Ct~ 90 (91)
T PF13246_consen 82 EVILDRCTH 90 (91)
T ss_pred HHHHHhcCC
Confidence 999999985
|
|
| >PRK10513 sugar phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.20 E-value=5.4e-11 Score=116.83 Aligned_cols=42 Identities=24% Similarity=0.363 Sum_probs=39.7
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCC
Q 044020 444 DPVRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAKECGIL 485 (563)
Q Consensus 444 d~~~~~~~~~I~~l~~~gi~v~i~TGd~~~~a~~~a~~lgi~ 485 (563)
.++.+.++++|++|+++|++++++|||+...+..+++++++.
T Consensus 19 ~~i~~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~ 60 (270)
T PRK10513 19 HTISPAVKQAIAAARAKGVNVVLTTGRPYAGVHRYLKELHME 60 (270)
T ss_pred CccCHHHHHHHHHHHHCCCEEEEecCCChHHHHHHHHHhCCC
Confidence 469999999999999999999999999999999999999975
|
|
| >COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.19 E-value=7.9e-11 Score=115.21 Aligned_cols=49 Identities=24% Similarity=0.334 Sum_probs=43.8
Q ss_pred EEecccCC-CCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC
Q 044020 438 AVVGIKDP-VRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAKECGILT 486 (563)
Q Consensus 438 G~i~~~d~-~~~~~~~~I~~l~~~gi~v~i~TGd~~~~a~~~a~~lgi~~ 486 (563)
|++.-.+. +.+.++++|++++++|++|+++|||+...+..+.+++++..
T Consensus 12 GTLl~~~~~i~~~~~~al~~~~~~g~~v~iaTGR~~~~~~~~~~~l~~~~ 61 (264)
T COG0561 12 GTLLDSNKTISPETKEALARLREKGVKVVLATGRPLPDVLSILEELGLDG 61 (264)
T ss_pred CCccCCCCccCHHHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCCc
Confidence 44444544 99999999999999999999999999999999999999985
|
|
| >PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.18 E-value=5.3e-11 Score=116.92 Aligned_cols=43 Identities=14% Similarity=0.140 Sum_probs=40.3
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC
Q 044020 444 DPVRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAKECGILT 486 (563)
Q Consensus 444 d~~~~~~~~~I~~l~~~gi~v~i~TGd~~~~a~~~a~~lgi~~ 486 (563)
..+.+.++++|++|+++|++++++|||+...+..+++++++..
T Consensus 18 ~~i~~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~ 60 (272)
T PRK15126 18 HHLGEKTLSTLARLRERDITLTFATGRHVLEMQHILGALSLDA 60 (272)
T ss_pred CcCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCC
Confidence 3599999999999999999999999999999999999999864
|
|
| >PRK10976 putative hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.18 E-value=6.7e-11 Score=115.84 Aligned_cols=43 Identities=21% Similarity=0.252 Sum_probs=40.1
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC
Q 044020 444 DPVRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAKECGILT 486 (563)
Q Consensus 444 d~~~~~~~~~I~~l~~~gi~v~i~TGd~~~~a~~~a~~lgi~~ 486 (563)
..+.+.++++|++++++|++++++|||+...+..+.+++++..
T Consensus 18 ~~is~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~ 60 (266)
T PRK10976 18 HTLSPYAKETLKLLTARGIHFVFATGRHHVDVGQIRDNLEIKS 60 (266)
T ss_pred CcCCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHhcCCCC
Confidence 3589999999999999999999999999999999999999864
|
|
| >PRK01158 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.11 E-value=2.4e-10 Score=109.33 Aligned_cols=125 Identities=27% Similarity=0.366 Sum_probs=85.5
Q ss_pred EEecccCC-CCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCC-----CCceee---chh------------
Q 044020 438 AVVGIKDP-VRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAKECGILTS-----DGEAVE---GPE------------ 496 (563)
Q Consensus 438 G~i~~~d~-~~~~~~~~I~~l~~~gi~v~i~TGd~~~~a~~~a~~lgi~~~-----~~~~~~---g~~------------ 496 (563)
|++.-.+. +.+.+.++|++++++|++++++|||+...+..+++.+|+..+ ...+.. +..
T Consensus 12 GTLl~~~~~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~ 91 (230)
T PRK01158 12 GTITDKDRRLSLKAVEAIRKAEKLGIPVILATGNVLCFARAAAKLIGTSGPVIAENGGVISVGFDGKRIFLGDIEECEKA 91 (230)
T ss_pred CCcCCCCCccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCCcEEEecCeEEEEcCCCCEEEEcchHHHHHH
Confidence 34433444 889999999999999999999999999999999999998642 111111 100
Q ss_pred ---hh-c----------CCCC----------------------CCCcceeE-----EEecChh--hHHHHHHHHHHhcC-
Q 044020 497 ---FR-N----------MSPA----------------------DIIPKLQV-----MARSLPS--DKHTLVTQLRNTFG- 532 (563)
Q Consensus 497 ---~~-~----------~~~~----------------------~~~~~~~v-----~~~~~p~--~K~~~v~~l~~~~g- 532 (563)
+. . .... .......+ +.+..|. .|...++.+.+++|
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ei~~~~~~Kg~al~~l~~~~~i 171 (230)
T PRK01158 92 YSELKKRFPEASTSLTKLDPDYRKTEVALRRTVPVEEVRELLEELGLDLEIVDSGFAIHIKSPGVNKGTGLKKLAELMGI 171 (230)
T ss_pred HHHHHHhccccceeeecCCcccccceeeecccccHHHHHHHHHHcCCcEEEEecceEEEEeeCCCChHHHHHHHHHHhCC
Confidence 00 0 0000 00000111 1233333 48888888887765
Q ss_pred --CEEEEEcCCccCHHHHhhCCceEeecCCCCC
Q 044020 533 --EVVAVTGDGTNDASALHEADIGLAMGIAGTE 563 (563)
Q Consensus 533 --~~v~~iGDg~ND~~~l~~a~vgiamg~~~~~ 563 (563)
+.++++||+.||++|++.|++|+||| ||.+
T Consensus 172 ~~~~~i~~GD~~NDi~m~~~ag~~vam~-Na~~ 203 (230)
T PRK01158 172 DPEEVAAIGDSENDLEMFEVAGFGVAVA-NADE 203 (230)
T ss_pred CHHHEEEECCchhhHHHHHhcCceEEec-CccH
Confidence 57999999999999999999999999 8863
|
|
| >TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal | Back alignment and domain information |
|---|
Probab=99.09 E-value=3.1e-10 Score=107.34 Aligned_cols=118 Identities=27% Similarity=0.373 Sum_probs=82.9
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCC-----CCceeech-hh--hc-----------------
Q 044020 445 PVRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAKECGILTS-----DGEAVEGP-EF--RN----------------- 499 (563)
Q Consensus 445 ~~~~~~~~~I~~l~~~gi~v~i~TGd~~~~a~~~a~~lgi~~~-----~~~~~~g~-~~--~~----------------- 499 (563)
++.+.+.++|++|+++|++++++|||+...+..+++.+++..+ ...++... .+ ..
T Consensus 18 ~i~~~~~~~i~~l~~~g~~~~~~TGR~~~~~~~~~~~l~~~~~~i~~NGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (215)
T TIGR01487 18 MISERAIEAIRKAEKKGIPVSLVTGNTVPFARALAVLIGTSGPVVAENGGVIFYNKEDIFLANMEEEWFLDEEKKKRFPR 97 (215)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCcchhHHHHHHHhCCCCcEEEccCcEEEeCCCcEEEecccchhhHHHhhhhhhhh
Confidence 4899999999999999999999999999999999999998642 11111100 00 00
Q ss_pred --CCC---C----------------CCCc--cee-----EEEecCh--hhHHHHHHHHHHhcC---CEEEEEcCCccCHH
Q 044020 500 --MSP---A----------------DIIP--KLQ-----VMARSLP--SDKHTLVTQLRNTFG---EVVAVTGDGTNDAS 546 (563)
Q Consensus 500 --~~~---~----------------~~~~--~~~-----v~~~~~p--~~K~~~v~~l~~~~g---~~v~~iGDg~ND~~ 546 (563)
... . .... ... .+.++.| ..|...++.+.+++| +.++++||+.||++
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~iGDs~ND~~ 177 (215)
T TIGR01487 98 DRLSNEYPRASLVIMREGKDVDEVREIIKERGLNLVDSGFAIHIMKKGVDKGVGVEKLKELLGIKPEEVAAIGDSENDID 177 (215)
T ss_pred hhcccccceeEEEEecCCccHHHHHHHHHhCCeEEEecCceEEEecCCCChHHHHHHHHHHhCCCHHHEEEECCCHHHHH
Confidence 000 0 0000 000 1123333 468889999888765 46999999999999
Q ss_pred HHhhCCceEeecCCCCC
Q 044020 547 ALHEADIGLAMGIAGTE 563 (563)
Q Consensus 547 ~l~~a~vgiamg~~~~~ 563 (563)
|++.|++|+||+ ||.+
T Consensus 178 ml~~ag~~vam~-na~~ 193 (215)
T TIGR01487 178 LFRVVGFKVAVA-NADD 193 (215)
T ss_pred HHHhCCCeEEcC-CccH
Confidence 999999999999 8753
|
TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. |
| >KOG4383 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.09 E-value=2.4e-08 Score=102.38 Aligned_cols=188 Identities=17% Similarity=0.259 Sum_probs=140.3
Q ss_pred CChhHHHhcccccccCCCccccCCHHHHHHHHHHHHHHHHHHHhHhHhhhhccCCCC---------------C-------
Q 044020 368 GASEIVLSMCDKVVSDNGEPVPLSEEQFRNITDVINGFASEALRTLCLAFKDLNDSS---------------N------- 425 (563)
Q Consensus 368 G~~~~il~~c~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~G~r~i~~a~~~l~~~~---------------~------- 425 (563)
|-...+...|+++|+. -...|++...+.++.+.+.+..-.|+ +++||||+..... .
T Consensus 698 g~ad~~~eACTdfWdG-adi~PlSg~dkkkV~DFY~RaclsG~-C~AfaYkP~~caLasqL~GKciEl~~~p~~SkI~T~ 775 (1354)
T KOG4383|consen 698 GFADFFEEACTDFWDG-ADIIPLSGRDKKKVKDFYLRACLSGH-CLAFAYKPCFCALASQLAGKCIELPLNPEHSKIETA 775 (1354)
T ss_pred cHHHHHHHHhhhhcCC-ceeeecCcchHHHHHHHHHHHhhccc-chheecccHHHHHHHHhCCceEEeccCcccchhhhh
Confidence 4456678999999963 46789999999999999999888885 8999998854321 0
Q ss_pred ------C-------C------------------CCCCCCceEEEEecccCCCCcchHHHHHHHHhCCCeEEEEcCCCHHH
Q 044020 426 ------E-------N------------------NIPDSGYTLIAVVGIKDPVRPGVKEAVQTCLEAGITVRMVTGDNINT 474 (563)
Q Consensus 426 ------~-------~------------------~~~~~~~~~lG~i~~~d~~~~~~~~~I~~l~~~gi~v~i~TGd~~~~ 474 (563)
. . .....+..|.|++..+.+.+++....|+.|-++.|+++..|-.+...
T Consensus 776 celp~sipikqnar~S~~e~Degige~l~~e~c~Qa~sGQIf~GlVs~~Yea~ldiVriIdgL~naCiRfVYFS~EdELk 855 (1354)
T KOG4383|consen 776 CELPHSIPIKQNARESFDEIDEGIGERLADEACDQAFSGQIFCGLVSLHYEAILDIVRIIDGLDNACIRFVYFSKEDELK 855 (1354)
T ss_pred ccCCCCCcchhhhhhhhhhhccccceeccHhHHHHHhccchhhhhhhhhccchhhHHHHHHHhhhhheeeeeecchHHHH
Confidence 0 0 12234567999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCCCCcee------------------------------------echh---------------hhcCCCC
Q 044020 475 ARAIAKECGILTSDGEAV------------------------------------EGPE---------------FRNMSPA 503 (563)
Q Consensus 475 a~~~a~~lgi~~~~~~~~------------------------------------~g~~---------------~~~~~~~ 503 (563)
.+-+|+++||.......+ +..+ +..++..
T Consensus 856 SkVFAEKlGiEaGWNCHISLa~~~d~Pg~e~~pa~~q~a~qkpSlhddlnqia~ddaeg~lL~~Eeg~~dliSfq~~dsd 935 (1354)
T KOG4383|consen 856 SKVFAEKLGIEAGWNCHISLAEEEDAPGREAGPAHEQFAAQKPSLHDDLNQIALDDAEGELLDCEEGARDLISFQKMDSD 935 (1354)
T ss_pred HHHHHHHhccccccceeEEeccCCCCCcccCCCCChhhhccCcchhHHHHHhhhcccccceeehhhcccCCccccccccc
Confidence 999999999976211000 0000 0000000
Q ss_pred ------------------------CCCcc----eeEEEecChhhHHHHHHHHHHhcCCEEEEEcCCcc--CHHHHhhCCc
Q 044020 504 ------------------------DIIPK----LQVMARSLPSDKHTLVTQLRNTFGEVVAVTGDGTN--DASALHEADI 553 (563)
Q Consensus 504 ------------------------~~~~~----~~v~~~~~p~~K~~~v~~l~~~~g~~v~~iGDg~N--D~~~l~~a~v 553 (563)
+.+.+ +..|..++|+...++++.+|+. |++++++|...| ....+-+||+
T Consensus 936 i~kf~ed~N~AkLPrGihnVRPHL~~iDNVPLLV~LFTDcnpeamcEMIeIMQE~-GEVtcclGS~aN~rNSciflkadI 1014 (1354)
T KOG4383|consen 936 IAKFAEDPNIAKLPRGIHNVRPHLDEIDNVPLLVGLFTDCNPEAMCEMIEIMQEN-GEVTCCLGSCANARNSCIFLKADI 1014 (1354)
T ss_pred hhhhcCCCchhhcCcchhhcCcccccccCcceeeeeccCCCHHHHHHHHHHHHHc-CcEEEEeccccccccceEEEccce
Confidence 01111 1258889999999999999998 999999999877 3445678899
Q ss_pred eEeec
Q 044020 554 GLAMG 558 (563)
Q Consensus 554 giamg 558 (563)
+||+-
T Consensus 1015 SialD 1019 (1354)
T KOG4383|consen 1015 SIALD 1019 (1354)
T ss_pred eEEec
Confidence 99874
|
|
| >PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=99.05 E-value=1.4e-09 Score=106.62 Aligned_cols=41 Identities=10% Similarity=0.047 Sum_probs=38.5
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCC
Q 044020 445 PVRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAKECGIL 485 (563)
Q Consensus 445 ~~~~~~~~~I~~l~~~gi~v~i~TGd~~~~a~~~a~~lgi~ 485 (563)
.+.+.++++|++|+++|++++++|||+...+..+++++|+.
T Consensus 24 ~i~~~~~~ai~~l~~~Gi~~viaTGR~~~~i~~~~~~l~~~ 64 (271)
T PRK03669 24 YDWQPAAPWLTRLREAQVPVILCSSKTAAEMLPLQQTLGLQ 64 (271)
T ss_pred cCcHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHhCCC
Confidence 46688999999999999999999999999999999999985
|
|
| >PLN02887 hydrolase family protein | Back alignment and domain information |
|---|
Probab=99.05 E-value=4.5e-10 Score=119.29 Aligned_cols=42 Identities=19% Similarity=0.267 Sum_probs=39.3
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCC
Q 044020 444 DPVRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAKECGIL 485 (563)
Q Consensus 444 d~~~~~~~~~I~~l~~~gi~v~i~TGd~~~~a~~~a~~lgi~ 485 (563)
..+.+.++++|++++++|++|+++|||+...+..+.+++++.
T Consensus 324 ~~Is~~t~eAI~kl~ekGi~~vIATGR~~~~i~~~l~~L~l~ 365 (580)
T PLN02887 324 SQISETNAKALKEALSRGVKVVIATGKARPAVIDILKMVDLA 365 (580)
T ss_pred CccCHHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCcc
Confidence 459999999999999999999999999999999999999874
|
|
| >COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.04 E-value=1.4e-09 Score=101.48 Aligned_cols=101 Identities=25% Similarity=0.293 Sum_probs=83.6
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCc-------eeechhhhcCCCCCCCcceeEEEecC
Q 044020 444 DPVRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAKECGILTSDGE-------AVEGPEFRNMSPADIIPKLQVMARSL 516 (563)
Q Consensus 444 d~~~~~~~~~I~~l~~~gi~v~i~TGd~~~~a~~~a~~lgi~~~~~~-------~~~g~~~~~~~~~~~~~~~~v~~~~~ 516 (563)
.++.|++.+.++.++++|.+|+++||-...-+.++++++|++..-.. +++|.. +-..+.
T Consensus 76 ~~l~~ga~elv~~lk~~G~~v~iiSgg~~~lv~~ia~~lg~d~~~an~l~~~dG~ltG~v--------------~g~~~~ 141 (212)
T COG0560 76 LRLTPGAEELVAALKAAGAKVVIISGGFTFLVEPIAERLGIDYVVANELEIDDGKLTGRV--------------VGPICD 141 (212)
T ss_pred CcCCccHHHHHHHHHHCCCEEEEEcCChHHHHHHHHHHhCCchheeeEEEEeCCEEecee--------------eeeecC
Confidence 67999999999999999999999999999999999999999874222 233321 222345
Q ss_pred hhhHHHHHHHHHHhcC---CEEEEEcCCccCHHHHhhCCceEeec
Q 044020 517 PSDKHTLVTQLRNTFG---EVVAVTGDGTNDASALHEADIGLAMG 558 (563)
Q Consensus 517 p~~K~~~v~~l~~~~g---~~v~~iGDg~ND~~~l~~a~vgiamg 558 (563)
.+.|...++.+.+.+| +.+.++|||.||+|||+.||.++|+.
T Consensus 142 ~~~K~~~l~~~~~~~g~~~~~~~a~gDs~nDlpml~~ag~~ia~n 186 (212)
T COG0560 142 GEGKAKALRELAAELGIPLEETVAYGDSANDLPMLEAAGLPIAVN 186 (212)
T ss_pred cchHHHHHHHHHHHcCCCHHHeEEEcCchhhHHHHHhCCCCeEeC
Confidence 6789999988887666 46999999999999999999999985
|
|
| >TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily | Back alignment and domain information |
|---|
Probab=99.03 E-value=6.8e-10 Score=105.86 Aligned_cols=117 Identities=26% Similarity=0.370 Sum_probs=82.5
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCceeechhhh-----------cCC------------
Q 044020 445 PVRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAKECGILTSDGEAVEGPEFR-----------NMS------------ 501 (563)
Q Consensus 445 ~~~~~~~~~I~~l~~~gi~v~i~TGd~~~~a~~~a~~lgi~~~~~~~~~g~~~~-----------~~~------------ 501 (563)
.+.+.+.++|++++++|++++++|||+...+..+++.+|+..+ .+..+|..+. .+.
T Consensus 15 ~i~~~~~~al~~l~~~Gi~~~~aTGR~~~~~~~~~~~l~~~~~-~i~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (225)
T TIGR01482 15 AINESALEAIRKAESVGIPVVLVTGNSVQFARALAKLIGTPDP-VIAENGGEISYNEGMDDIFLAYLEEEWFLDIVIAKT 93 (225)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCCe-EEEecCcEEEeCCCCceEEecccCHHHHHHHHHhcc
Confidence 4889999999999999999999999999999999999996431 1111111000 000
Q ss_pred -----------CC--------------------CCCccee-----EEEecCh--hhHHHHHHHHHHhcC---CEEEEEcC
Q 044020 502 -----------PA--------------------DIIPKLQ-----VMARSLP--SDKHTLVTQLRNTFG---EVVAVTGD 540 (563)
Q Consensus 502 -----------~~--------------------~~~~~~~-----v~~~~~p--~~K~~~v~~l~~~~g---~~v~~iGD 540 (563)
.. ....... .+.+..| ..|...++.+.+++| +.++++||
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~~GD 173 (225)
T TIGR01482 94 FPFSRLKVQYPRRASLVKMRYGIDVDTVREIIKELGLNLVAVDSGFDIHILPQGVNKGVAVKKLKEKLGIKPGETLVCGD 173 (225)
T ss_pred cchhhhccccccccceEEEeecCCHHHHHHHHHhcCceEEEecCCcEEEEeeCCCCHHHHHHHHHHHhCCCHHHEEEECC
Confidence 00 0000000 1122333 368888999888766 68999999
Q ss_pred CccCHHHHhhCCceEeecCCCCC
Q 044020 541 GTNDASALHEADIGLAMGIAGTE 563 (563)
Q Consensus 541 g~ND~~~l~~a~vgiamg~~~~~ 563 (563)
+.||++||+.|++|+||| ||.+
T Consensus 174 ~~NDi~m~~~ag~~vam~-Na~~ 195 (225)
T TIGR01482 174 SENDIDLFEVPGFGVAVA-NAQP 195 (225)
T ss_pred CHhhHHHHHhcCceEEcC-ChhH
Confidence 999999999999999999 8753
|
catalyze the same reaction as SPP. |
| >PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification [] | Back alignment and domain information |
|---|
Probab=99.03 E-value=6.2e-10 Score=107.90 Aligned_cols=43 Identities=28% Similarity=0.437 Sum_probs=40.5
Q ss_pred cCCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCC
Q 044020 443 KDPVRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAKECGIL 485 (563)
Q Consensus 443 ~d~~~~~~~~~I~~l~~~gi~v~i~TGd~~~~a~~~a~~lgi~ 485 (563)
...+.+.++++|++|+++|++++++|||++..+..+.+++++.
T Consensus 13 ~~~i~~~~~~al~~l~~~g~~~~i~TGR~~~~~~~~~~~~~~~ 55 (254)
T PF08282_consen 13 DGKISPETIEALKELQEKGIKLVIATGRSYSSIKRLLKELGID 55 (254)
T ss_dssp TSSSCHHHHHHHHHHHHTTCEEEEECSSTHHHHHHHHHHTTHC
T ss_pred CCeeCHHHHHHHHhhcccceEEEEEccCcccccccccccccch
Confidence 4558899999999999999999999999999999999999987
|
This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A .... |
| >TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein | Back alignment and domain information |
|---|
Probab=99.00 E-value=1.5e-09 Score=100.92 Aligned_cols=100 Identities=18% Similarity=0.144 Sum_probs=78.9
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCC--ceeec-hhhhcCCCCCCCcceeEEEecChhhHH
Q 044020 445 PVRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAKECGILTSDG--EAVEG-PEFRNMSPADIIPKLQVMARSLPSDKH 521 (563)
Q Consensus 445 ~~~~~~~~~I~~l~~~gi~v~i~TGd~~~~a~~~a~~lgi~~~~~--~~~~g-~~~~~~~~~~~~~~~~v~~~~~p~~K~ 521 (563)
++.|++.+.|+.+++.| +++++||-....+.++++++|+..... ..+.+ ..+ ... . ...++.|.
T Consensus 68 ~l~pga~ell~~lk~~~-~~~IVS~~~~~~~~~il~~lgi~~~~an~l~~~~~g~~--------tG~--~--~~~~~~K~ 134 (203)
T TIGR02137 68 KPLEGAVEFVDWLRERF-QVVILSDTFYEFSQPLMRQLGFPTLLCHKLEIDDSDRV--------VGY--Q--LRQKDPKR 134 (203)
T ss_pred CCCccHHHHHHHHHhCC-eEEEEeCChHHHHHHHHHHcCCchhhceeeEEecCCee--------ECe--e--ecCcchHH
Confidence 58999999999999985 999999999999999999999975221 11111 000 000 0 13467899
Q ss_pred HHHHHHHHhcCCEEEEEcCCccCHHHHhhCCceEeec
Q 044020 522 TLVTQLRNTFGEVVAVTGDGTNDASALHEADIGLAMG 558 (563)
Q Consensus 522 ~~v~~l~~~~g~~v~~iGDg~ND~~~l~~a~vgiamg 558 (563)
..++.+++. +..+.++|||.||++|++.||+||+|.
T Consensus 135 ~~l~~l~~~-~~~~v~vGDs~nDl~ml~~Ag~~ia~~ 170 (203)
T TIGR02137 135 QSVIAFKSL-YYRVIAAGDSYNDTTMLSEAHAGILFH 170 (203)
T ss_pred HHHHHHHhh-CCCEEEEeCCHHHHHHHHhCCCCEEec
Confidence 999999776 878999999999999999999999996
|
This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338). |
| >PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.97 E-value=2.2e-09 Score=105.59 Aligned_cols=42 Identities=26% Similarity=0.289 Sum_probs=39.7
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC
Q 044020 445 PVRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAKECGILT 486 (563)
Q Consensus 445 ~~~~~~~~~I~~l~~~gi~v~i~TGd~~~~a~~~a~~lgi~~ 486 (563)
.+.+.++++|++++++|++++++|||+...+..+++++++..
T Consensus 20 ~i~~~~~~ai~~~~~~G~~~~iaTGR~~~~~~~~~~~l~~~~ 61 (272)
T PRK10530 20 TILPESLEALARAREAGYKVIIVTGRHHVAIHPFYQALALDT 61 (272)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHhcCCCC
Confidence 589999999999999999999999999999999999999864
|
|
| >PRK11133 serB phosphoserine phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.92 E-value=4.2e-09 Score=104.59 Aligned_cols=102 Identities=23% Similarity=0.323 Sum_probs=77.9
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCC---ceeechhhhcCCCCCCCcceeEEE-ecChhhH
Q 044020 445 PVRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAKECGILTSDG---EAVEGPEFRNMSPADIIPKLQVMA-RSLPSDK 520 (563)
Q Consensus 445 ~~~~~~~~~I~~l~~~gi~v~i~TGd~~~~a~~~a~~lgi~~~~~---~~~~g~~~~~~~~~~~~~~~~v~~-~~~p~~K 520 (563)
++.|++.+.++.|++.|+++.++||.....+..+.+++|++.... .+..|.... .+.. -+....|
T Consensus 181 ~l~pGa~elL~~Lk~~G~~~aIvSgg~~~~~~~l~~~Lgld~~~an~lei~dg~ltg-----------~v~g~iv~~k~K 249 (322)
T PRK11133 181 PLMPGLTELVLKLQALGWKVAIASGGFTYFADYLRDKLRLDAAVANELEIMDGKLTG-----------NVLGDIVDAQYK 249 (322)
T ss_pred CCChhHHHHHHHHHHcCCEEEEEECCcchhHHHHHHHcCCCeEEEeEEEEECCEEEe-----------EecCccCCcccH
Confidence 489999999999999999999999999888899999999864110 011110000 0000 1234679
Q ss_pred HHHHHHHHHhcC---CEEEEEcCCccCHHHHhhCCceEee
Q 044020 521 HTLVTQLRNTFG---EVVAVTGDGTNDASALHEADIGLAM 557 (563)
Q Consensus 521 ~~~v~~l~~~~g---~~v~~iGDg~ND~~~l~~a~vgiam 557 (563)
.+.++.+.+++| +.++++|||.||++|++.||+||||
T Consensus 250 ~~~L~~la~~lgi~~~qtIaVGDg~NDl~m~~~AGlgiA~ 289 (322)
T PRK11133 250 ADTLTRLAQEYEIPLAQTVAIGDGANDLPMIKAAGLGIAY 289 (322)
T ss_pred HHHHHHHHHHcCCChhhEEEEECCHHHHHHHHHCCCeEEe
Confidence 999999887765 6899999999999999999999999
|
|
| >TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family | Back alignment and domain information |
|---|
Probab=98.90 E-value=6.3e-09 Score=92.50 Aligned_cols=95 Identities=21% Similarity=0.333 Sum_probs=74.9
Q ss_pred eEEEEecccCCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCceeechhhhcCCCCCCCcceeEEEe
Q 044020 435 TLIAVVGIKDPVRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAKECGILTSDGEAVEGPEFRNMSPADIIPKLQVMAR 514 (563)
Q Consensus 435 ~~lG~i~~~d~~~~~~~~~I~~l~~~gi~v~i~TGd~~~~a~~~a~~lgi~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~ 514 (563)
..++.+.+.|. .+|++|+++|+++.++||++...+..+++++|+.. .|..
T Consensus 24 ~~~~~~~~~~~------~~i~~Lk~~G~~i~IvTn~~~~~~~~~l~~~gi~~------------------------~~~~ 73 (154)
T TIGR01670 24 EEIKAFNVRDG------YGIRCALKSGIEVAIITGRKAKLVEDRCKTLGITH------------------------LYQG 73 (154)
T ss_pred cEEEEEechhH------HHHHHHHHCCCEEEEEECCCCHHHHHHHHHcCCCE------------------------EEec
Confidence 44555444433 28999999999999999999999999999999975 4443
Q ss_pred cChhhHHHHHHHHHHhcC---CEEEEEcCCccCHHHHhhCCceEeecCCCC
Q 044020 515 SLPSDKHTLVTQLRNTFG---EVVAVTGDGTNDASALHEADIGLAMGIAGT 562 (563)
Q Consensus 515 ~~p~~K~~~v~~l~~~~g---~~v~~iGDg~ND~~~l~~a~vgiamg~~~~ 562 (563)
. ..|...++.+.+++| +.++++||+.||++|++.|+++++|. ++.
T Consensus 74 ~--~~k~~~~~~~~~~~~~~~~~~~~vGDs~~D~~~~~~ag~~~~v~-~~~ 121 (154)
T TIGR01670 74 Q--SNKLIAFSDILEKLALAPENVAYIGDDLIDWPVMEKVGLSVAVA-DAH 121 (154)
T ss_pred c--cchHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCeEecC-CcC
Confidence 2 346666666655444 68999999999999999999999998 664
|
The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved. |
| >TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit | Back alignment and domain information |
|---|
Probab=98.89 E-value=2.9e-09 Score=95.36 Aligned_cols=84 Identities=21% Similarity=0.236 Sum_probs=69.0
Q ss_pred HHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCceeechhhhcCCCCCCCcceeEEEecChhhHHHHHHHHHHhc
Q 044020 452 EAVQTCLEAGITVRMVTGDNINTARAIAKECGILTSDGEAVEGPEFRNMSPADIIPKLQVMARSLPSDKHTLVTQLRNTF 531 (563)
Q Consensus 452 ~~I~~l~~~gi~v~i~TGd~~~~a~~~a~~lgi~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~~~~ 531 (563)
.+|+.|+++|+++.++|+.+...+...++.+|+.. +|.... .|...++.+.+++
T Consensus 41 ~~~~~L~~~Gi~laIiT~k~~~~~~~~l~~lgi~~------------------------~f~~~k--pkp~~~~~~~~~l 94 (169)
T TIGR02726 41 MGVIVLQLCGIDVAIITSKKSGAVRHRAEELKIKR------------------------FHEGIK--KKTEPYAQMLEEM 94 (169)
T ss_pred HHHHHHHHCCCEEEEEECCCcHHHHHHHHHCCCcE------------------------EEecCC--CCHHHHHHHHHHc
Confidence 57999999999999999999999999999999975 554432 3334444444443
Q ss_pred C---CEEEEEcCCccCHHHHhhCCceEeecCCCC
Q 044020 532 G---EVVAVTGDGTNDASALHEADIGLAMGIAGT 562 (563)
Q Consensus 532 g---~~v~~iGDg~ND~~~l~~a~vgiamg~~~~ 562 (563)
+ +.+++|||+.||++|++.|++++||+ ||.
T Consensus 95 ~~~~~ev~~iGD~~nDi~~~~~ag~~~am~-nA~ 127 (169)
T TIGR02726 95 NISDAEVCYVGDDLVDLSMMKRVGLAVAVG-DAV 127 (169)
T ss_pred CcCHHHEEEECCCHHHHHHHHHCCCeEECc-Cch
Confidence 3 68999999999999999999999999 774
|
Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases. |
| >TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family | Back alignment and domain information |
|---|
Probab=98.88 E-value=1.6e-08 Score=98.33 Aligned_cols=49 Identities=20% Similarity=0.129 Sum_probs=40.6
Q ss_pred EEecccCC-CCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC
Q 044020 438 AVVGIKDP-VRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAKECGILT 486 (563)
Q Consensus 438 G~i~~~d~-~~~~~~~~I~~l~~~gi~v~i~TGd~~~~a~~~a~~lgi~~ 486 (563)
|++.-.+. ..+.++++|++|+++|++++++|||+...+..+++++|+..
T Consensus 8 GTll~~~~~~~~~~~~~i~~l~~~g~~~~~~TgR~~~~~~~~~~~~~~~~ 57 (256)
T TIGR01486 8 GTLLDPHGYDWGPAKEVLERLQELGIPVIPCTSKTAAEVEYLRKELGLED 57 (256)
T ss_pred CCCcCCCCcCchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCC
Confidence 33333343 45579999999999999999999999999999999999853
|
This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta |
| >COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.87 E-value=4.1e-09 Score=89.14 Aligned_cols=84 Identities=25% Similarity=0.370 Sum_probs=74.1
Q ss_pred HHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCceeechhhhcCCCCCCCcceeEEEecChhhHHHHHHHHHHhc
Q 044020 452 EAVQTCLEAGITVRMVTGDNINTARAIAKECGILTSDGEAVEGPEFRNMSPADIIPKLQVMARSLPSDKHTLVTQLRNTF 531 (563)
Q Consensus 452 ~~I~~l~~~gi~v~i~TGd~~~~a~~~a~~lgi~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~~~~ 531 (563)
-.|+.+.+.|+++.++|||....+..-|+.||+.. +|.. ..+|....+.|.+++
T Consensus 42 ~Gik~l~~~Gi~vAIITGr~s~ive~Ra~~LGI~~------------------------~~qG--~~dK~~a~~~L~~~~ 95 (170)
T COG1778 42 HGIKLLLKSGIKVAIITGRDSPIVEKRAKDLGIKH------------------------LYQG--ISDKLAAFEELLKKL 95 (170)
T ss_pred HHHHHHHHcCCeEEEEeCCCCHHHHHHHHHcCCce------------------------eeec--hHhHHHHHHHHHHHh
Confidence 35899999999999999999999999999999986 6654 478888888887765
Q ss_pred C---CEEEEEcCCccCHHHHhhCCceEeecCCCC
Q 044020 532 G---EVVAVTGDGTNDASALHEADIGLAMGIAGT 562 (563)
Q Consensus 532 g---~~v~~iGDg~ND~~~l~~a~vgiamg~~~~ 562 (563)
+ +.|+++||..||.|+|+.+++++|+. +|.
T Consensus 96 ~l~~e~~ayiGDD~~Dlpvm~~vGls~a~~-dAh 128 (170)
T COG1778 96 NLDPEEVAYVGDDLVDLPVMEKVGLSVAVA-DAH 128 (170)
T ss_pred CCCHHHhhhhcCccccHHHHHHcCCccccc-ccC
Confidence 5 78999999999999999999999998 663
|
|
| >PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=98.83 E-value=2.4e-08 Score=98.02 Aligned_cols=44 Identities=23% Similarity=0.214 Sum_probs=40.2
Q ss_pred cCCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC
Q 044020 443 KDPVRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAKECGILT 486 (563)
Q Consensus 443 ~d~~~~~~~~~I~~l~~~gi~v~i~TGd~~~~a~~~a~~lgi~~ 486 (563)
...+.+.++++|++|+++|++++++|||+...+..+++++|+..
T Consensus 19 ~~~~~~~~~~ai~~l~~~Gi~~~iaTgR~~~~~~~~~~~l~l~~ 62 (273)
T PRK00192 19 HTYSYEPAKPALKALKEKGIPVIPCTSKTAAEVEVLRKELGLED 62 (273)
T ss_pred CCcCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCC
Confidence 34577889999999999999999999999999999999999864
|
|
| >TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily | Back alignment and domain information |
|---|
Probab=98.82 E-value=1.3e-08 Score=98.95 Aligned_cols=43 Identities=35% Similarity=0.491 Sum_probs=39.9
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC
Q 044020 444 DPVRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAKECGILT 486 (563)
Q Consensus 444 d~~~~~~~~~I~~l~~~gi~v~i~TGd~~~~a~~~a~~lgi~~ 486 (563)
.++.+.+.++|++|+++|++++++|||+...+..+.+++++..
T Consensus 15 ~~i~~~~~~~i~~l~~~G~~~~iaTGR~~~~~~~~~~~~~~~~ 57 (256)
T TIGR00099 15 HTISPSTKEALAKLREKGIKVVLATGRPYKEVKNILKELGLDT 57 (256)
T ss_pred CccCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCCC
Confidence 3588999999999999999999999999999999999999863
|
The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences. |
| >PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.75 E-value=2.3e-08 Score=91.60 Aligned_cols=83 Identities=22% Similarity=0.313 Sum_probs=70.5
Q ss_pred HHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCceeechhhhcCCCCCCCcceeEEEecChhhHHHHHHHHHHhc
Q 044020 452 EAVQTCLEAGITVRMVTGDNINTARAIAKECGILTSDGEAVEGPEFRNMSPADIIPKLQVMARSLPSDKHTLVTQLRNTF 531 (563)
Q Consensus 452 ~~I~~l~~~gi~v~i~TGd~~~~a~~~a~~lgi~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~~~~ 531 (563)
.+|+.|+++|+++.++||++...+..+++++|+.. +|.. .+.|...++.+.+++
T Consensus 55 ~~i~~L~~~Gi~v~I~T~~~~~~v~~~l~~lgl~~------------------------~f~g--~~~k~~~l~~~~~~~ 108 (183)
T PRK09484 55 YGIRCLLTSGIEVAIITGRKSKLVEDRMTTLGITH------------------------LYQG--QSNKLIAFSDLLEKL 108 (183)
T ss_pred HHHHHHHHCCCEEEEEeCCCcHHHHHHHHHcCCce------------------------eecC--CCcHHHHHHHHHHHh
Confidence 58999999999999999999999999999999875 4442 345777777766654
Q ss_pred C---CEEEEEcCCccCHHHHhhCCceEeecCCC
Q 044020 532 G---EVVAVTGDGTNDASALHEADIGLAMGIAG 561 (563)
Q Consensus 532 g---~~v~~iGDg~ND~~~l~~a~vgiamg~~~ 561 (563)
| +++++|||+.||++|++.|+++++++ ++
T Consensus 109 gl~~~ev~~VGDs~~D~~~a~~aG~~~~v~-~~ 140 (183)
T PRK09484 109 AIAPEQVAYIGDDLIDWPVMEKVGLSVAVA-DA 140 (183)
T ss_pred CCCHHHEEEECCCHHHHHHHHHCCCeEecC-Ch
Confidence 5 68999999999999999999999987 54
|
|
| >TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase | Back alignment and domain information |
|---|
Probab=98.69 E-value=4e-08 Score=93.14 Aligned_cols=44 Identities=14% Similarity=0.164 Sum_probs=40.0
Q ss_pred cCCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC
Q 044020 443 KDPVRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAKECGILT 486 (563)
Q Consensus 443 ~d~~~~~~~~~I~~l~~~gi~v~i~TGd~~~~a~~~a~~lgi~~ 486 (563)
.+...+.++++|++|+++|++++++|||++..+..+++++|+..
T Consensus 13 ~~~~~~~~~~ai~~l~~~G~~~vi~TgR~~~~~~~~~~~lg~~~ 56 (225)
T TIGR02461 13 PGYEPGPAREALEELKDLGFPIVFVSSKTRAEQEYYREELGVEP 56 (225)
T ss_pred CCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCC
Confidence 45667789999999999999999999999999999999999854
|
Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles. |
| >TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein | Back alignment and domain information |
|---|
Probab=98.68 E-value=1.8e-07 Score=88.87 Aligned_cols=40 Identities=20% Similarity=0.183 Sum_probs=37.0
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCC
Q 044020 446 VRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAKECGIL 485 (563)
Q Consensus 446 ~~~~~~~~I~~l~~~gi~v~i~TGd~~~~a~~~a~~lgi~ 485 (563)
+.+.++++|++|+++|++++++|||+...+..+++.+|+.
T Consensus 17 ~~~~~~~~l~~l~~~gi~~~i~TgR~~~~~~~~~~~l~~~ 56 (221)
T TIGR02463 17 DWQPAAPWLTRLQEAGIPVILCTSKTAAEVEYLQKALGLT 56 (221)
T ss_pred CcHHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCC
Confidence 4445999999999999999999999999999999999986
|
This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate. |
| >KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.66 E-value=4.5e-08 Score=85.80 Aligned_cols=101 Identities=24% Similarity=0.391 Sum_probs=76.8
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCC----cee--echhhhcCCCCCCCcceeEEE----e
Q 044020 445 PVRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAKECGILTSDG----EAV--EGPEFRNMSPADIIPKLQVMA----R 514 (563)
Q Consensus 445 ~~~~~~~~~I~~l~~~gi~v~i~TGd~~~~a~~~a~~lgi~~~~~----~~~--~g~~~~~~~~~~~~~~~~v~~----~ 514 (563)
.+.|++++.+..|++.|.+|.++||--..-+.++|.+|||+..+. ..+ +|+. .-|- .
T Consensus 88 ~lT~Gi~eLv~~L~~~~~~v~liSGGF~~~i~~Va~~Lgi~~~n~yAN~l~fd~~Gk~-------------~gfd~~~pt 154 (227)
T KOG1615|consen 88 TLTPGIRELVSRLHARGTQVYLISGGFRQLIEPVAEQLGIPKSNIYANELLFDKDGKY-------------LGFDTNEPT 154 (227)
T ss_pred ccCCCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHhCCcHhhhhhheeeeccCCcc-------------cccccCCcc
Confidence 378999999999999999999999999999999999999986321 111 1110 0111 1
Q ss_pred cChhhHHHHHHHHHHhcC-CEEEEEcCCccCHHHHhhCCceEeec
Q 044020 515 SLPSDKHTLVTQLRNTFG-EVVAVTGDGTNDASALHEADIGLAMG 558 (563)
Q Consensus 515 ~~p~~K~~~v~~l~~~~g-~~v~~iGDg~ND~~~l~~a~vgiamg 558 (563)
.....|.+.++.+++.++ ..++|||||.||++|+..|+.=++.|
T Consensus 155 sdsggKa~~i~~lrk~~~~~~~~mvGDGatDlea~~pa~afi~~~ 199 (227)
T KOG1615|consen 155 SDSGGKAEVIALLRKNYNYKTIVMVGDGATDLEAMPPADAFIGFG 199 (227)
T ss_pred ccCCccHHHHHHHHhCCChheeEEecCCccccccCCchhhhhccC
Confidence 223579999999988644 58999999999999999877655544
|
|
| >TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal | Back alignment and domain information |
|---|
Probab=98.64 E-value=1.9e-07 Score=87.24 Aligned_cols=107 Identities=22% Similarity=0.262 Sum_probs=77.5
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCceeechhhhcCCCCCCCcceeEEEecChhhHHHHH
Q 044020 445 PVRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAKECGILTSDGEAVEGPEFRNMSPADIIPKLQVMARSLPSDKHTLV 524 (563)
Q Consensus 445 ~~~~~~~~~I~~l~~~gi~v~i~TGd~~~~a~~~a~~lgi~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v 524 (563)
+++|++.+.++.|+++|++++++|+.....+..+++.+|+.......+...+.. ...+. .+....+..|...+
T Consensus 80 ~~~~g~~e~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~g~~~~~~~~~~~~~~g-----~~~p~--~~~~~~~~~k~~~~ 152 (201)
T TIGR01491 80 SLRDYAEELVRWLKEKGLKTAIVSGGIMCLAKKVAEKLNPDYVYSNELVFDEKG-----FIQPD--GIVRVTFDNKGEAV 152 (201)
T ss_pred CCCccHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHhCCCeEEEEEEEEcCCC-----eEecc--eeeEEccccHHHHH
Confidence 489999999999999999999999999999999999999864211111100000 00000 11123355677777
Q ss_pred HHHHHhcC---CEEEEEcCCccCHHHHhhCCceEeec
Q 044020 525 TQLRNTFG---EVVAVTGDGTNDASALHEADIGLAMG 558 (563)
Q Consensus 525 ~~l~~~~g---~~v~~iGDg~ND~~~l~~a~vgiamg 558 (563)
+.+.+.++ +.++++||+.||++|++.||++++++
T Consensus 153 ~~~~~~~~~~~~~~i~iGDs~~D~~~a~~ag~~~a~~ 189 (201)
T TIGR01491 153 ERLKRELNPSLTETVAVGDSKNDLPMFEVADISISLG 189 (201)
T ss_pred HHHHHHhCCCHHHEEEEcCCHhHHHHHHhcCCeEEEC
Confidence 77765544 57999999999999999999999996
|
This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog. |
| >TIGR00338 serB phosphoserine phosphatase SerB | Back alignment and domain information |
|---|
Probab=98.59 E-value=2.1e-07 Score=88.22 Aligned_cols=104 Identities=26% Similarity=0.309 Sum_probs=75.6
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCcee--echhhhcCCCCCCCcceeEEEe-cChhhHH
Q 044020 445 PVRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAKECGILTSDGEAV--EGPEFRNMSPADIIPKLQVMAR-SLPSDKH 521 (563)
Q Consensus 445 ~~~~~~~~~I~~l~~~gi~v~i~TGd~~~~a~~~a~~lgi~~~~~~~~--~g~~~~~~~~~~~~~~~~v~~~-~~p~~K~ 521 (563)
++.+++.+.++.|+++|++++++|+.....+..+++.+|+.......+ .+..+. ..+... ..+..|.
T Consensus 85 ~~~~g~~~~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~k~ 154 (219)
T TIGR00338 85 PLTEGAEELVKTLKEKGYKVAVISGGFDLFAEHVKDKLGLDAAFANRLEVEDGKLT----------GLVEGPIVDASYKG 154 (219)
T ss_pred CcCCCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCceEeeEEEEECCEEE----------EEecCcccCCcccH
Confidence 589999999999999999999999999999999999999875211100 000000 000111 1123467
Q ss_pred HHHHHHHHhcC---CEEEEEcCCccCHHHHhhCCceEeec
Q 044020 522 TLVTQLRNTFG---EVVAVTGDGTNDASALHEADIGLAMG 558 (563)
Q Consensus 522 ~~v~~l~~~~g---~~v~~iGDg~ND~~~l~~a~vgiamg 558 (563)
.+++.+.++++ +.++++||+.+|++|++.||++++++
T Consensus 155 ~~~~~~~~~~~~~~~~~i~iGDs~~Di~aa~~ag~~i~~~ 194 (219)
T TIGR00338 155 KTLLILLRKEGISPENTVAVGDGANDLSMIKAAGLGIAFN 194 (219)
T ss_pred HHHHHHHHHcCCCHHHEEEEECCHHHHHHHHhCCCeEEeC
Confidence 77777766544 57999999999999999999999986
|
Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins. |
| >TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase | Back alignment and domain information |
|---|
Probab=98.58 E-value=1.6e-07 Score=90.82 Aligned_cols=119 Identities=17% Similarity=0.200 Sum_probs=82.4
Q ss_pred cCCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCC-ceeechhhhc----------------------
Q 044020 443 KDPVRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAKECGILTSDG-EAVEGPEFRN---------------------- 499 (563)
Q Consensus 443 ~d~~~~~~~~~I~~l~~~gi~v~i~TGd~~~~a~~~a~~lgi~~~~~-~~~~g~~~~~---------------------- 499 (563)
..+..|.+.+++++++++|+.++++|||+...++.+.+++++..+.- ++-+|..+..
T Consensus 19 ~~~~~~~~~~~i~~~~~~gi~fv~aTGR~~~~~~~~~~~~~~~~p~~~I~~NGa~I~~~~~~~~~~~~~~~~~~~~~~~~ 98 (249)
T TIGR01485 19 DNQALLRLNALLEDHRGEDSLLVYSTGRSPHSYKELQKQKPLLTPDIWVTSVGSEIYYGGAEVPDQHWAEYLSEKWQRDI 98 (249)
T ss_pred ChHHHHHHHHHHHHhhccCceEEEEcCCCHHHHHHHHhcCCCCCCCEEEEcCCceEEeCCCCcCCHHHHHHHhcccCHHH
Confidence 34577899999999999999999999999999999999999865421 1111211100
Q ss_pred ----------CCCC----CCCc---------------------------ceeE-E-----EecCh--hhHHHHHHHHHHh
Q 044020 500 ----------MSPA----DIIP---------------------------KLQV-M-----ARSLP--SDKHTLVTQLRNT 530 (563)
Q Consensus 500 ----------~~~~----~~~~---------------------------~~~v-~-----~~~~p--~~K~~~v~~l~~~ 530 (563)
+... +... +..+ + .++.| ..|...++.+.+.
T Consensus 99 ~~~~~~~~~~l~~~~~~~~~~~k~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~ldi~~~~~~K~~al~~l~~~ 178 (249)
T TIGR01485 99 VVAITDKFEELKPQPDLEQRPHKVSFFLDPEAAPEVIKQLTEMLKETGLDVKLIYSSGKDLDILPQGSGKGQALQYLLQK 178 (249)
T ss_pred HHHHHhcCcccccCCccccCCeeEEEEechhhhhHHHHHHHHHHHhcCCCEEEEEECCceEEEEeCCCChHHHHHHHHHH
Confidence 0000 0000 0000 1 12233 3588888888877
Q ss_pred cC---CEEEEEcCCccCHHHHhh-CCceEeecCCCC
Q 044020 531 FG---EVVAVTGDGTNDASALHE-ADIGLAMGIAGT 562 (563)
Q Consensus 531 ~g---~~v~~iGDg~ND~~~l~~-a~vgiamg~~~~ 562 (563)
+| +.++++||+.||++||+. ++.||||+ |+.
T Consensus 179 ~~i~~~~~i~~GD~~ND~~ml~~~~~~~va~~-na~ 213 (249)
T TIGR01485 179 LAMEPSQTLVCGDSGNDIELFEIGSVRGVIVS-NAQ 213 (249)
T ss_pred cCCCccCEEEEECChhHHHHHHccCCcEEEEC-CCH
Confidence 65 689999999999999998 67999999 875
|
Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain. |
| >PRK13582 thrH phosphoserine phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.52 E-value=4.1e-07 Score=85.31 Aligned_cols=99 Identities=23% Similarity=0.287 Sum_probs=77.4
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCcee--echhhhcCCCCCCCcceeEEE--ecChhhH
Q 044020 445 PVRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAKECGILTSDGEAV--EGPEFRNMSPADIIPKLQVMA--RSLPSDK 520 (563)
Q Consensus 445 ~~~~~~~~~I~~l~~~gi~v~i~TGd~~~~a~~~a~~lgi~~~~~~~~--~g~~~~~~~~~~~~~~~~v~~--~~~p~~K 520 (563)
++.|++.+.++.|+++ +++.++|+.....+..+.+++|+.......+ ..... +.. ...|..|
T Consensus 68 ~~~pg~~e~L~~L~~~-~~~~IvS~~~~~~~~~~l~~~gl~~~f~~~~~~~~~~~-------------i~~~~~~~p~~k 133 (205)
T PRK13582 68 DPLPGAVEFLDWLRER-FQVVILSDTFYEFAGPLMRQLGWPTLFCHSLEVDEDGM-------------ITGYDLRQPDGK 133 (205)
T ss_pred CCCCCHHHHHHHHHhc-CCEEEEeCCcHHHHHHHHHHcCCchhhcceEEECCCCe-------------EECccccccchH
Confidence 3689999999999999 9999999999999999999999864211111 00000 100 1236778
Q ss_pred HHHHHHHHHhcCCEEEEEcCCccCHHHHhhCCceEeec
Q 044020 521 HTLVTQLRNTFGEVVAVTGDGTNDASALHEADIGLAMG 558 (563)
Q Consensus 521 ~~~v~~l~~~~g~~v~~iGDg~ND~~~l~~a~vgiamg 558 (563)
...++.++.. ++.++||||+.||++|.+.|++|++++
T Consensus 134 ~~~l~~~~~~-~~~~v~iGDs~~D~~~~~aa~~~v~~~ 170 (205)
T PRK13582 134 RQAVKALKSL-GYRVIAAGDSYNDTTMLGEADAGILFR 170 (205)
T ss_pred HHHHHHHHHh-CCeEEEEeCCHHHHHHHHhCCCCEEEC
Confidence 8888888876 889999999999999999999999875
|
|
| >PLN02382 probable sucrose-phosphatase | Back alignment and domain information |
|---|
Probab=98.50 E-value=4e-07 Score=93.93 Aligned_cols=117 Identities=21% Similarity=0.228 Sum_probs=79.5
Q ss_pred CCCcchHHHH-HHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCC-ceeechhh-------------------------
Q 044020 445 PVRPGVKEAV-QTCLEAGITVRMVTGDNINTARAIAKECGILTSDG-EAVEGPEF------------------------- 497 (563)
Q Consensus 445 ~~~~~~~~~I-~~l~~~gi~v~i~TGd~~~~a~~~a~~lgi~~~~~-~~~~g~~~------------------------- 497 (563)
++.+....++ +++++.|+.++++|||++..+..+.+++++..+.- ++-+|..+
T Consensus 28 ~~s~~~~~~l~~~~~~~gi~fv~aTGR~~~~~~~l~~~~~l~~p~~~I~~nGt~I~~~~~~~~d~~w~~~l~~~w~~~~v 107 (413)
T PLN02382 28 NLSLLRFNALWEAEYRHDSLLVFSTGRSPTLYKELRKEKPLLTPDITIMSVGTEIAYGESMVPDHGWVEYLNKKWDREIV 107 (413)
T ss_pred chhHHHHHHHHHHhhcCCeeEEEEcCCCHHHHHHHHHhCCCCCCCEEEEcCCcEEEeCCCCccChhHHHHHhccCChhhH
Confidence 3444455556 88999999999999999999999999999876531 11112110
Q ss_pred ----hcCC-----CC--CCCc---------------------------cee------EEEecChh--hHHHHHHHHHHhc
Q 044020 498 ----RNMS-----PA--DIIP---------------------------KLQ------VMARSLPS--DKHTLVTQLRNTF 531 (563)
Q Consensus 498 ----~~~~-----~~--~~~~---------------------------~~~------v~~~~~p~--~K~~~v~~l~~~~ 531 (563)
..+. .. +... ... .+.++.|. .|...++.+.+++
T Consensus 108 ~~~~~~~~~l~~q~~~~~~~~Ki~~~~~~~~~~~~~~~l~~~~~~~g~~~~i~~s~~~~ldI~p~g~sKg~Al~~L~~~~ 187 (413)
T PLN02382 108 VEETSKFPELKLQPETEQRPHKVSFYVDKKKAQEVIKELSERLEKRGLDVKIIYSGGIDLDVLPQGAGKGQALAYLLKKL 187 (413)
T ss_pred HHHHhcCCCcccCCcccCCCeEEEEEechHHhHHHHHHHHHHHHhcCCcEEEEEECCcEEEEEeCCCCHHHHHHHHHHHh
Confidence 0000 00 0000 001 12233443 5889999998876
Q ss_pred ---C---CEEEEEcCCccCHHHHhhCC-ceEeecCCCC
Q 044020 532 ---G---EVVAVTGDGTNDASALHEAD-IGLAMGIAGT 562 (563)
Q Consensus 532 ---g---~~v~~iGDg~ND~~~l~~a~-vgiamg~~~~ 562 (563)
| +.++++||+.||++||+.++ .||||| ||.
T Consensus 188 ~~~gi~~~~~iafGDs~NDleMl~~ag~~gvam~-NA~ 224 (413)
T PLN02382 188 KAEGKAPVNTLVCGDSGNDAELFSVPDVYGVMVS-NAQ 224 (413)
T ss_pred hhcCCChhcEEEEeCCHHHHHHHhcCCCCEEEEc-CCc
Confidence 3 58999999999999999999 699999 875
|
|
| >PRK10187 trehalose-6-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.50 E-value=5.1e-07 Score=87.91 Aligned_cols=117 Identities=16% Similarity=0.284 Sum_probs=79.3
Q ss_pred CCCcchHHHHHHHHh-CCCeEEEEcCCCHHHHHHHHHHcCCC--CCCCc-eee--ch-hhhcCC----------------
Q 044020 445 PVRPGVKEAVQTCLE-AGITVRMVTGDNINTARAIAKECGIL--TSDGE-AVE--GP-EFRNMS---------------- 501 (563)
Q Consensus 445 ~~~~~~~~~I~~l~~-~gi~v~i~TGd~~~~a~~~a~~lgi~--~~~~~-~~~--g~-~~~~~~---------------- 501 (563)
.+.+.++++|++|++ .|++|+++|||+...+..+++.+++. ..+.. +.. +. ....+.
T Consensus 36 ~i~~~~~~~L~~L~~~~g~~v~i~SGR~~~~~~~~~~~~~~~~i~~nGa~i~~~~~~~~~~~l~~~~~~~i~~~l~~~~~ 115 (266)
T PRK10187 36 VVPDNILQGLQLLATANDGALALISGRSMVELDALAKPYRFPLAGVHGAERRDINGKTHIVHLPDAIARDISVQLHTALA 115 (266)
T ss_pred cCCHHHHHHHHHHHhCCCCcEEEEeCCCHHHHHHhcCcccceEEEeCCCeeecCCCCeeeccCChhHHHHHHHHHHHHhc
Confidence 577899999999998 79999999999999999988877642 11110 100 00 000000
Q ss_pred ----------------------CC------------CCCccee-----EEEecCh--hhHHHHHHHHHHhcC---CEEEE
Q 044020 502 ----------------------PA------------DIIPKLQ-----VMARSLP--SDKHTLVTQLRNTFG---EVVAV 537 (563)
Q Consensus 502 ----------------------~~------------~~~~~~~-----v~~~~~p--~~K~~~v~~l~~~~g---~~v~~ 537 (563)
.. ....... .+.++.| ..|+..++.+.+++| ..+++
T Consensus 116 ~~pg~~ve~k~~~~~~h~r~~~~~~~~~~~l~~~i~~~~~~~~~~~g~~~lEi~p~g~~Kg~al~~ll~~~~~~~~~v~~ 195 (266)
T PRK10187 116 QLPGAELEAKGMAFALHYRQAPQHEDALLALAQRITQIWPQLALQPGKCVVEIKPRGTNKGEAIAAFMQEAPFAGRTPVF 195 (266)
T ss_pred cCCCcEEEeCCcEEEEECCCCCccHHHHHHHHHHHHhhCCceEEeCCCEEEEeeCCCCCHHHHHHHHHHhcCCCCCeEEE
Confidence 00 0000011 1223344 368899998888765 68999
Q ss_pred EcCCccCHHHHhhC----CceEeecCCCC
Q 044020 538 TGDGTNDASALHEA----DIGLAMGIAGT 562 (563)
Q Consensus 538 iGDg~ND~~~l~~a----~vgiamg~~~~ 562 (563)
+||+.||.+||+.+ ++||+|| ++.
T Consensus 196 ~GD~~nD~~mf~~~~~~~g~~vavg-~a~ 223 (266)
T PRK10187 196 VGDDLTDEAGFAVVNRLGGISVKVG-TGA 223 (266)
T ss_pred EcCCccHHHHHHHHHhcCCeEEEEC-CCC
Confidence 99999999999999 9999999 764
|
|
| >TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase | Back alignment and domain information |
|---|
Probab=98.49 E-value=8e-07 Score=83.87 Aligned_cols=108 Identities=18% Similarity=0.156 Sum_probs=76.1
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCC---CCceeechhhhcCCCCCCCcceeEE--EecChh
Q 044020 444 DPVRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAKECGILTS---DGEAVEGPEFRNMSPADIIPKLQVM--ARSLPS 518 (563)
Q Consensus 444 d~~~~~~~~~I~~l~~~gi~v~i~TGd~~~~a~~~a~~lgi~~~---~~~~~~g~~~~~~~~~~~~~~~~v~--~~~~p~ 518 (563)
-+++|++.+.++.|++.|+++.++||.....+..+++.++.... +...+.+..+.... +.-..+ ......
T Consensus 69 ~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~~~~~~i~~n~~~~~~~~~~~~~-----p~~~~~~~~~~cg~ 143 (214)
T TIGR03333 69 AEIREGFREFVAFINEHGIPFYVISGGMDFFVYPLLEGIVEKDRIYCNEADFSNEYIHIDW-----PHPCDGTCQNQCGC 143 (214)
T ss_pred CcccccHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHhhCCcccEEeceeEeeCCeeEEeC-----CCCCccccccCCCC
Confidence 35999999999999999999999999999999999988754321 11222222211000 000000 000124
Q ss_pred hHHHHHHHHHHhcCCEEEEEcCCccCHHHHhhCCceEee
Q 044020 519 DKHTLVTQLRNTFGEVVAVTGDGTNDASALHEADIGLAM 557 (563)
Q Consensus 519 ~K~~~v~~l~~~~g~~v~~iGDg~ND~~~l~~a~vgiam 557 (563)
.|..+++.++.. ++.+++||||.||++|++.||+.+|=
T Consensus 144 ~K~~~l~~~~~~-~~~~i~iGDg~~D~~~a~~Ad~~~ar 181 (214)
T TIGR03333 144 CKPSLIRKLSEP-NDYHIVIGDSVTDVEAAKQSDLCFAR 181 (214)
T ss_pred CHHHHHHHHhhc-CCcEEEEeCCHHHHHHHHhCCeeEeh
Confidence 689999988876 78899999999999999999998763
|
Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX. |
| >TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490 | Back alignment and domain information |
|---|
Probab=98.48 E-value=6.8e-07 Score=83.60 Aligned_cols=108 Identities=13% Similarity=0.088 Sum_probs=77.7
Q ss_pred cCCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCC--ceeechhhhcCCCCCCCcceeEEEecChhhH
Q 044020 443 KDPVRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAKECGILTSDG--EAVEGPEFRNMSPADIIPKLQVMARSLPSDK 520 (563)
Q Consensus 443 ~d~~~~~~~~~I~~l~~~gi~v~i~TGd~~~~a~~~a~~lgi~~~~~--~~~~g~~~~~~~~~~~~~~~~v~~~~~p~~K 520 (563)
..++.+++.+.++.++++|++++++||.....+..+++.+|+..--. .....+.. ...+. .-..+..+.|
T Consensus 85 ~~~~~~~~~~~l~~l~~~g~~v~ivS~s~~~~v~~~~~~lg~~~~~~~~l~~~~~g~-------~~g~~-~~~~~~g~~K 156 (202)
T TIGR01490 85 ESILYPEARDLIRWHKAEGHTIVLVSASLTILVKPLARILGIDNAIGTRLEESEDGI-------YTGNI-DGNNCKGEGK 156 (202)
T ss_pred HHhccHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCcceEecceEEcCCCE-------EeCCc-cCCCCCChHH
Confidence 34589999999999999999999999999999999999999964211 11100000 00000 0011235678
Q ss_pred HHHHHHHHHhcC---CEEEEEcCCccCHHHHhhCCceEeec
Q 044020 521 HTLVTQLRNTFG---EVVAVTGDGTNDASALHEADIGLAMG 558 (563)
Q Consensus 521 ~~~v~~l~~~~g---~~v~~iGDg~ND~~~l~~a~vgiamg 558 (563)
...++.+.+..+ +.+.++||+.+|++|++.||.++++.
T Consensus 157 ~~~l~~~~~~~~~~~~~~~~~gDs~~D~~~~~~a~~~~~v~ 197 (202)
T TIGR01490 157 VHALAELLAEEQIDLKDSYAYGDSISDLPLLSLVGHPYVVN 197 (202)
T ss_pred HHHHHHHHHHcCCCHHHcEeeeCCcccHHHHHhCCCcEEeC
Confidence 887877765434 37899999999999999999999886
|
A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog. |
| >PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=98.45 E-value=1.5e-06 Score=83.35 Aligned_cols=44 Identities=5% Similarity=0.006 Sum_probs=40.2
Q ss_pred cCCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC
Q 044020 443 KDPVRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAKECGILT 486 (563)
Q Consensus 443 ~d~~~~~~~~~I~~l~~~gi~v~i~TGd~~~~a~~~a~~lgi~~ 486 (563)
.+.+.+.++++|++|+++|+.|+++|||+...+..+.+++++..
T Consensus 16 ~~~~~~~a~~aL~~Lk~~GI~vVlaTGRt~~ev~~l~~~Lgl~~ 59 (302)
T PRK12702 16 EFNSYGAARQALAALERRSIPLVLYSLRTRAQLEHLCRQLRLEH 59 (302)
T ss_pred CCcCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHhCCCC
Confidence 34577889999999999999999999999999999999999864
|
|
| >PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.44 E-value=9e-07 Score=94.13 Aligned_cols=40 Identities=10% Similarity=0.152 Sum_probs=37.4
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCC
Q 044020 446 VRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAKECGIL 485 (563)
Q Consensus 446 ~~~~~~~~I~~l~~~gi~v~i~TGd~~~~a~~~a~~lgi~ 485 (563)
+.+.++++|++|+++|++++++|||+...+..+++++|+.
T Consensus 434 i~~~t~eAL~~L~ekGI~~VIATGRs~~~i~~l~~~Lgl~ 473 (694)
T PRK14502 434 SYSTALDALRLLKDKELPLVFCSAKTMGEQDLYRNELGIK 473 (694)
T ss_pred cCHHHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCCC
Confidence 5568899999999999999999999999999999999975
|
|
| >TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial | Back alignment and domain information |
|---|
Probab=98.40 E-value=6e-07 Score=86.14 Aligned_cols=43 Identities=28% Similarity=0.459 Sum_probs=38.1
Q ss_pred hHHHHHHHHHHhcC---CEEEEEcCCccCHHHHhhCCceEeecCCCC
Q 044020 519 DKHTLVTQLRNTFG---EVVAVTGDGTNDASALHEADIGLAMGIAGT 562 (563)
Q Consensus 519 ~K~~~v~~l~~~~g---~~v~~iGDg~ND~~~l~~a~vgiamg~~~~ 562 (563)
.|...++.+.+++| ..++++||+.||++||+.++.||+|+ |+.
T Consensus 159 ~K~~al~~l~~~~g~~~~~~i~~GD~~nD~~ml~~~~~~iav~-na~ 204 (236)
T TIGR02471 159 SKGLALRYLSYRWGLPLEQILVAGDSGNDEEMLRGLTLGVVVG-NHD 204 (236)
T ss_pred ChHHHHHHHHHHhCCCHHHEEEEcCCccHHHHHcCCCcEEEEc-CCc
Confidence 68888888888765 47999999999999999999999999 875
|
Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472. |
| >TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like | Back alignment and domain information |
|---|
Probab=98.38 E-value=1.1e-06 Score=80.17 Aligned_cols=101 Identities=21% Similarity=0.223 Sum_probs=70.3
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCceeechhhhcCCCCCCCcceeEEEecChhhHHHHHH
Q 044020 446 VRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAKECGILTSDGEAVEGPEFRNMSPADIIPKLQVMARSLPSDKHTLVT 525 (563)
Q Consensus 446 ~~~~~~~~I~~l~~~gi~v~i~TGd~~~~a~~~a~~lgi~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~ 525 (563)
+++++.+.++.+++.|++++++||.....+..+++.+|+..-....+...+ ......+...-....+..|...++
T Consensus 74 ~~~g~~~~l~~l~~~g~~~~ivS~~~~~~i~~~~~~~g~~~~~~~~~~~~~-----~g~~~g~~~~~~~~~~~~K~~~l~ 148 (177)
T TIGR01488 74 LRPGARELISWLKERGIDTVIVSGGFDFFVEPVAEKLGIDDVFANRLEFDD-----NGLLTGPIEGQVNPEGECKGKVLK 148 (177)
T ss_pred cCcCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCchheeeeEEECC-----CCEEeCccCCcccCCcchHHHHHH
Confidence 679999999999999999999999999999999999998641111110000 000000000001234578999998
Q ss_pred HHHHhcC---CEEEEEcCCccCHHHHhhC
Q 044020 526 QLRNTFG---EVVAVTGDGTNDASALHEA 551 (563)
Q Consensus 526 ~l~~~~g---~~v~~iGDg~ND~~~l~~a 551 (563)
.+.+..+ +.++++|||.||++|++.|
T Consensus 149 ~~~~~~~~~~~~~~~iGDs~~D~~~~~~a 177 (177)
T TIGR01488 149 ELLEESKITLKKIIAVGDSVNDLPMLKLA 177 (177)
T ss_pred HHHHHhCCCHHHEEEEeCCHHHHHHHhcC
Confidence 8776533 5799999999999999875
|
Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences. |
| >PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B | Back alignment and domain information |
|---|
Probab=98.36 E-value=8.6e-07 Score=82.08 Aligned_cols=92 Identities=25% Similarity=0.233 Sum_probs=67.6
Q ss_pred cchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCceeechhhhcCCCCCCCcceeEEEecChh---hHHHHH
Q 044020 448 PGVKEAVQTCLEAGITVRMVTGDNINTARAIAKECGILTSDGEAVEGPEFRNMSPADIIPKLQVMARSLPS---DKHTLV 524 (563)
Q Consensus 448 ~~~~~~I~~l~~~gi~v~i~TGd~~~~a~~~a~~lgi~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~p~---~K~~~v 524 (563)
+++.+.|+.++++|++++|+||.+...+.++++.+|+.......... . .. .......+.++. .|...+
T Consensus 92 ~~~~e~i~~~~~~~~~v~IvS~~~~~~i~~~~~~~~i~~~~v~~~~~-~-~~-------~~~~~~~~~~~~~~~~K~~~l 162 (192)
T PF12710_consen 92 PDAMELIRELKDNGIKVVIVSGSPDEIIEPIAERLGIDDDNVIGNEL-F-DN-------GGGIFTGRITGSNCGGKAEAL 162 (192)
T ss_dssp TTHHHHHHHHHHTTSEEEEEEEEEHHHHHHHHHHTTSSEGGEEEEEE-E-CT-------TCCEEEEEEEEEEESHHHHHH
T ss_pred hhHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCceEEEEEee-e-ec-------ccceeeeeECCCCCCcHHHHH
Confidence 78889999999999999999999999999999999997522111111 0 00 001123333333 499999
Q ss_pred HHH------HHhcCCEEEEEcCCccCHHHHh
Q 044020 525 TQL------RNTFGEVVAVTGDGTNDASALH 549 (563)
Q Consensus 525 ~~l------~~~~g~~v~~iGDg~ND~~~l~ 549 (563)
+.+ +.. ...++++|||.||++|||
T Consensus 163 ~~~~~~~~~~~~-~~~~~~iGDs~~D~~~lr 192 (192)
T PF12710_consen 163 KELYIRDEEDID-PDRVIAIGDSINDLPMLR 192 (192)
T ss_dssp HHHHHHHHHTHT-CCEEEEEESSGGGHHHHH
T ss_pred HHHHHHhhcCCC-CCeEEEEECCHHHHHHhC
Confidence 999 233 689999999999999996
|
|
| >TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase | Back alignment and domain information |
|---|
Probab=98.35 E-value=2e-06 Score=79.24 Aligned_cols=113 Identities=19% Similarity=0.171 Sum_probs=77.8
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCceeechhhhcCCCC-CCCcceeEEEe--cChhhH
Q 044020 444 DPVRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAKECGILTSDGEAVEGPEFRNMSPA-DIIPKLQVMAR--SLPSDK 520 (563)
Q Consensus 444 d~~~~~~~~~I~~l~~~gi~v~i~TGd~~~~a~~~a~~lgi~~~~~~~~~g~~~~~~~~~-~~~~~~~v~~~--~~p~~K 520 (563)
-++.+++.+.++.|++.|+++.++|+.....+..+.+.+|+......++......+-... ...+....-+. .....|
T Consensus 71 ~~l~~g~~~ll~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~K 150 (188)
T TIGR01489 71 APIDPGFKEFIAFIKEHGIDFIVISDGNDFFIDPVLEGIGEKDVFIEIYSNPASFDNDGRHIVWPHHCHGCCSCPCGCCK 150 (188)
T ss_pred CCCCccHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHHcCChhheeEEeccCceECCCCcEEEecCCCCccCcCCCCCCH
Confidence 368999999999999999999999999999999999999986543333332221110000 00000000001 112358
Q ss_pred HHHHHHHHHhcCCEEEEEcCCccCHHHHhhCCceEe
Q 044020 521 HTLVTQLRNTFGEVVAVTGDGTNDASALHEADIGLA 556 (563)
Q Consensus 521 ~~~v~~l~~~~g~~v~~iGDg~ND~~~l~~a~vgia 556 (563)
..+++.++.+..+.++++|||.||+.|.+.||+-.|
T Consensus 151 ~~~~~~~~~~~~~~~i~iGD~~~D~~aa~~~d~~~a 186 (188)
T TIGR01489 151 GKVIHKLSEPKYQHIIYIGDGVTDVCPAKLSDVVFA 186 (188)
T ss_pred HHHHHHHHhhcCceEEEECCCcchhchHhcCCcccc
Confidence 889998877536789999999999999999987654
|
Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact. |
| >cd01427 HAD_like Haloacid dehalogenase-like hydrolases | Back alignment and domain information |
|---|
Probab=98.32 E-value=2.1e-06 Score=74.26 Aligned_cols=114 Identities=21% Similarity=0.211 Sum_probs=75.0
Q ss_pred ccCCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCceeechhhhcCCCC---CCCcceeEEEecChh
Q 044020 442 IKDPVRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAKECGILTSDGEAVEGPEFRNMSPA---DIIPKLQVMARSLPS 518 (563)
Q Consensus 442 ~~d~~~~~~~~~I~~l~~~gi~v~i~TGd~~~~a~~~a~~lgi~~~~~~~~~g~~~~~~~~~---~~~~~~~v~~~~~p~ 518 (563)
...++.+++.+.+++|++.|++++++||+....+...++.+|+......++........... ..........+..+.
T Consensus 21 ~~~~~~~~~~~~l~~l~~~g~~i~ivS~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (139)
T cd01427 21 EELELYPGVKEALKELKEKGIKLALATNKSRREVLELLEELGLDDYFDPVITSNGAAIYYPKEGLFLGGGPFDIGKPNPD 100 (139)
T ss_pred ccCCcCcCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHHcCCchhhhheeccchhhhhcccccccccccccccCCCCHH
Confidence 34578999999999999999999999999999999999999985433333322211100000 001111122233344
Q ss_pred hHHHHHHHHHHhcCCEEEEEcCCccCHHHHhhCC-ceEe
Q 044020 519 DKHTLVTQLRNTFGEVVAVTGDGTNDASALHEAD-IGLA 556 (563)
Q Consensus 519 ~K~~~v~~l~~~~g~~v~~iGDg~ND~~~l~~a~-vgia 556 (563)
.+..+.+.+... .+.++++||+.+|+.|++.++ -+|+
T Consensus 101 ~~~~~~~~~~~~-~~~~~~igD~~~d~~~~~~~g~~~i~ 138 (139)
T cd01427 101 KLLAALKLLGVD-PEEVLMVGDSLNDIEMAKAAGGLGVA 138 (139)
T ss_pred HHHHHHHHcCCC-hhhEEEeCCCHHHHHHHHHcCCceee
Confidence 455555555443 578999999999999999954 3554
|
The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases. |
| >PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=98.29 E-value=2.8e-06 Score=80.49 Aligned_cols=105 Identities=24% Similarity=0.241 Sum_probs=73.0
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCC----CceeechhhhcCCCCCCCcceeE--EEecChh
Q 044020 445 PVRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAKECGILTSD----GEAVEGPEFRNMSPADIIPKLQV--MARSLPS 518 (563)
Q Consensus 445 ~~~~~~~~~I~~l~~~gi~v~i~TGd~~~~a~~~a~~lgi~~~~----~~~~~g~~~~~~~~~~~~~~~~v--~~~~~p~ 518 (563)
+++|++.+.++.|++.|+++.++|+-....+..+.+.+ +.... ...+.|..+... .+.-.. +......
T Consensus 74 ~l~pG~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~-~~~~~i~~n~~~~~~~~~~~~-----kp~p~~~~~~~~~~~ 147 (219)
T PRK09552 74 EIREGFHEFVQFVKENNIPFYVVSGGMDFFVYPLLQGL-IPKEQIYCNGSDFSGEYITIT-----WPHPCDEHCQNHCGC 147 (219)
T ss_pred CcCcCHHHHHHHHHHcCCeEEEECCCcHHHHHHHHHHh-CCcCcEEEeEEEecCCeeEEe-----ccCCccccccccCCC
Confidence 58999999999999999999999999999999999998 64311 111222211000 000000 0000012
Q ss_pred hHHHHHHHHHHhcCCEEEEEcCCccCHHHHhhCCceEe
Q 044020 519 DKHTLVTQLRNTFGEVVAVTGDGTNDASALHEADIGLA 556 (563)
Q Consensus 519 ~K~~~v~~l~~~~g~~v~~iGDg~ND~~~l~~a~vgia 556 (563)
.|..+++.++.. ++.+++||||.||++|.+.||+.++
T Consensus 148 ~K~~~l~~~~~~-~~~~i~iGDs~~Di~aa~~Ag~~~a 184 (219)
T PRK09552 148 CKPSLIRKLSDT-NDFHIVIGDSITDLEAAKQADKVFA 184 (219)
T ss_pred chHHHHHHhccC-CCCEEEEeCCHHHHHHHHHCCccee
Confidence 478888888776 6789999999999999999999665
|
|
| >COG0546 Gph Predicted phosphatases [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.28 E-value=2.6e-06 Score=80.74 Aligned_cols=102 Identities=25% Similarity=0.298 Sum_probs=81.8
Q ss_pred cCCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCceeechhhhcCCCCCCCcceeEEEecChhhHHH
Q 044020 443 KDPVRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAKECGILTSDGEAVEGPEFRNMSPADIIPKLQVMARSLPSDKHT 522 (563)
Q Consensus 443 ~d~~~~~~~~~I~~l~~~gi~v~i~TGd~~~~a~~~a~~lgi~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~p~~K~~ 522 (563)
...+-|++.+++..|+++|++..++|+++...+..+.+.+|+......++.+.+. ......|.....
T Consensus 87 ~~~~~~gv~e~L~~L~~~g~~l~i~T~k~~~~~~~~l~~~gl~~~F~~i~g~~~~-------------~~~KP~P~~l~~ 153 (220)
T COG0546 87 ESRLFPGVKELLAALKSAGYKLGIVTNKPERELDILLKALGLADYFDVIVGGDDV-------------PPPKPDPEPLLL 153 (220)
T ss_pred cCccCCCHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHhCCccccceEEcCCCC-------------CCCCcCHHHHHH
Confidence 4568899999999999999999999999999999999999998765555543321 122345666667
Q ss_pred HHHHHHHhcCCEEEEEcCCccCHHHHhhCC---ceEeec
Q 044020 523 LVTQLRNTFGEVVAVTGDGTNDASALHEAD---IGLAMG 558 (563)
Q Consensus 523 ~v~~l~~~~g~~v~~iGDg~ND~~~l~~a~---vgiamg 558 (563)
+++.+... .++++||||..+|+.|-+.|| +|+..|
T Consensus 154 ~~~~~~~~-~~~~l~VGDs~~Di~aA~~Ag~~~v~v~~g 191 (220)
T COG0546 154 LLEKLGLD-PEEALMVGDSLNDILAAKAAGVPAVGVTWG 191 (220)
T ss_pred HHHHhCCC-hhheEEECCCHHHHHHHHHcCCCEEEEECC
Confidence 77777665 568999999999999999999 567766
|
|
| >PLN02954 phosphoserine phosphatase | Back alignment and domain information |
|---|
Probab=98.27 E-value=5.5e-06 Score=78.80 Aligned_cols=101 Identities=22% Similarity=0.295 Sum_probs=72.0
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCC----ceeechhhhcCCCCCCCcceeEEEe------
Q 044020 445 PVRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAKECGILTSDG----EAVEGPEFRNMSPADIIPKLQVMAR------ 514 (563)
Q Consensus 445 ~~~~~~~~~I~~l~~~gi~v~i~TGd~~~~a~~~a~~lgi~~~~~----~~~~g~~~~~~~~~~~~~~~~v~~~------ 514 (563)
++.|++.+.++.|+++|+++.++||.....+..+++.+|+..... ..+..... +...
T Consensus 84 ~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~~l~~~gi~~~~~~~~~~~~~~~g~-------------~~g~~~~~~~ 150 (224)
T PLN02954 84 RLSPGIPELVKKLRARGTDVYLVSGGFRQMIAPVAAILGIPPENIFANQILFGDSGE-------------YAGFDENEPT 150 (224)
T ss_pred CCCccHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHhCCChhhEEEeEEEEcCCCc-------------EECccCCCcc
Confidence 378999999999999999999999999999999999999963110 00100000 0000
Q ss_pred cChhhHHHHHHHHHHhcC-CEEEEEcCCccCHHHHhhC--CceEeec
Q 044020 515 SLPSDKHTLVTQLRNTFG-EVVAVTGDGTNDASALHEA--DIGLAMG 558 (563)
Q Consensus 515 ~~p~~K~~~v~~l~~~~g-~~v~~iGDg~ND~~~l~~a--~vgiamg 558 (563)
.....|...++.+.+.++ +.++++||+.||+.|.+.+ +++++.|
T Consensus 151 ~~~~~K~~~i~~~~~~~~~~~~i~iGDs~~Di~aa~~~~~~~~~~~~ 197 (224)
T PLN02954 151 SRSGGKAEAVQHIKKKHGYKTMVMIGDGATDLEARKPGGADLFIGYG 197 (224)
T ss_pred cCCccHHHHHHHHHHHcCCCceEEEeCCHHHHHhhhcCCCCEEEecC
Confidence 112357788888777644 5799999999999998884 4445444
|
|
| >PTZ00174 phosphomannomutase; Provisional | Back alignment and domain information |
|---|
Probab=98.17 E-value=8.8e-06 Score=78.54 Aligned_cols=44 Identities=14% Similarity=0.278 Sum_probs=36.2
Q ss_pred EEecccC-CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHH
Q 044020 438 AVVGIKD-PVRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAKE 481 (563)
Q Consensus 438 G~i~~~d-~~~~~~~~~I~~l~~~gi~v~i~TGd~~~~a~~~a~~ 481 (563)
|++.-.+ ++.+.++++|++++++|++++++|||+........+.
T Consensus 14 GTLL~~~~~is~~~~~ai~~l~~~Gi~~viaTGR~~~~i~~~l~~ 58 (247)
T PTZ00174 14 GTLTKPRNPITQEMKDTLAKLKSKGFKIGVVGGSDYPKIKEQLGE 58 (247)
T ss_pred CCCcCCCCCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHhh
Confidence 4444444 5999999999999999999999999999988776653
|
|
| >TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB | Back alignment and domain information |
|---|
Probab=98.16 E-value=8.7e-06 Score=76.21 Aligned_cols=113 Identities=23% Similarity=0.378 Sum_probs=76.8
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCC--CCCCC-ceee-chhh--------h-------cC-----
Q 044020 445 PVRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAKECGI--LTSDG-EAVE-GPEF--------R-------NM----- 500 (563)
Q Consensus 445 ~~~~~~~~~I~~l~~~gi~v~i~TGd~~~~a~~~a~~lgi--~~~~~-~~~~-g~~~--------~-------~~----- 500 (563)
++.+.+.++|++|++.|++++++|||+...+..+++.++. ...+. .+.. +... . .+
T Consensus 17 ~~~~~~~~~l~~l~~~g~~~~i~TGR~~~~~~~~~~~~~~~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (204)
T TIGR01484 17 ELSPETIEALERLREAGVKVVLVTGRSLAEIKELLKQLPLPLIAENGALIFYPGEILYIEPSDVFEEILGIKEEIGAELK 96 (204)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHhCCCCEEECCCcEEEECCEEEEEcccccHHHHHHhhhhcCceee
Confidence 5889999999999999999999999999999999988542 11111 1111 0000 0 00
Q ss_pred --CC---------C---------CC--------------------CcceeEE------EecCh--hhHHHHHHHHHHhcC
Q 044020 501 --SP---------A---------DI--------------------IPKLQVM------ARSLP--SDKHTLVTQLRNTFG 532 (563)
Q Consensus 501 --~~---------~---------~~--------------------~~~~~v~------~~~~p--~~K~~~v~~l~~~~g 532 (563)
.. . .. .....+. .++.| ..|...++.+.++++
T Consensus 97 ~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ev~p~~~~K~~~~~~~~~~~~ 176 (204)
T TIGR01484 97 SLSEHYVGTFIEDKAIAVAIHYVGAELGQELDSKMRERLEKIGRNDLELEAIYVGKTDLEVLPAGVDKGSALQALLKELN 176 (204)
T ss_pred eeccccccceeecccceeeEEEeccchhhHHHHHHHHHHHhhccccCcEEEEEecCCEEEEecCCCChHHHHHHHHHHhC
Confidence 00 0 00 0111121 12334 468899999887755
Q ss_pred ---CEEEEEcCCccCHHHHhhCCceEee
Q 044020 533 ---EVVAVTGDGTNDASALHEADIGLAM 557 (563)
Q Consensus 533 ---~~v~~iGDg~ND~~~l~~a~vgiam 557 (563)
+.++++||+.||.+|++.+++||||
T Consensus 177 ~~~~~~~~~GD~~nD~~~~~~~~~~vam 204 (204)
T TIGR01484 177 GKRDEILAFGDSGNDEEMFEVAGLAVAV 204 (204)
T ss_pred CCHHHEEEEcCCHHHHHHHHHcCCceEC
Confidence 6799999999999999999999998
|
The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear. |
| >PRK13222 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.12 E-value=1.1e-05 Score=76.89 Aligned_cols=101 Identities=21% Similarity=0.248 Sum_probs=72.6
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCceeechhhhcCCCCCCCcceeEEEecChhhHHHH
Q 044020 444 DPVRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAKECGILTSDGEAVEGPEFRNMSPADIIPKLQVMARSLPSDKHTL 523 (563)
Q Consensus 444 d~~~~~~~~~I~~l~~~gi~v~i~TGd~~~~a~~~a~~lgi~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~p~~K~~~ 523 (563)
.++.|++.++++.|+++|++++++|+........+.+.+|+......++.+.... .....|+--..+
T Consensus 92 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~-------------~~kp~~~~~~~~ 158 (226)
T PRK13222 92 SRLYPGVKETLAALKAAGYPLAVVTNKPTPFVAPLLEALGIADYFSVVIGGDSLP-------------NKKPDPAPLLLA 158 (226)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCccCccEEEcCCCCC-------------CCCcChHHHHHH
Confidence 4588999999999999999999999999999999999999865333333222110 001122323344
Q ss_pred HHHHHHhcCCEEEEEcCCccCHHHHhhCCc-eEeec
Q 044020 524 VTQLRNTFGEVVAVTGDGTNDASALHEADI-GLAMG 558 (563)
Q Consensus 524 v~~l~~~~g~~v~~iGDg~ND~~~l~~a~v-giamg 558 (563)
++.++.. .+.+++|||+.+|+.|.+.+|+ +|.+.
T Consensus 159 ~~~~~~~-~~~~i~igD~~~Di~~a~~~g~~~i~v~ 193 (226)
T PRK13222 159 CEKLGLD-PEEMLFVGDSRNDIQAARAAGCPSVGVT 193 (226)
T ss_pred HHHcCCC-hhheEEECCCHHHHHHHHHCCCcEEEEC
Confidence 4444443 5789999999999999999999 55543
|
|
| >TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic | Back alignment and domain information |
|---|
Probab=98.04 E-value=1.2e-05 Score=75.75 Aligned_cols=97 Identities=19% Similarity=0.220 Sum_probs=70.4
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCceeechhhhcCCCCCCCcceeEEEecChhhHHHHH
Q 044020 445 PVRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAKECGILTSDGEAVEGPEFRNMSPADIIPKLQVMARSLPSDKHTLV 524 (563)
Q Consensus 445 ~~~~~~~~~I~~l~~~gi~v~i~TGd~~~~a~~~a~~lgi~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v 524 (563)
++.|++.++++.|+++|+++.++|+.+...+..+.+.+|+......++.+.+.. .....|+--..++
T Consensus 85 ~~~~g~~~~L~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~-------------~~Kp~p~~~~~~~ 151 (213)
T TIGR01449 85 SVFPGVEATLGALRAKGLRLGLVTNKPTPLARPLLELLGLAKYFSVLIGGDSLA-------------QRKPHPDPLLLAA 151 (213)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCcHhhCcEEEecCCCC-------------CCCCChHHHHHHH
Confidence 588999999999999999999999999999999999999875433333322210 0112223233444
Q ss_pred HHHHHhcCCEEEEEcCCccCHHHHhhCCceE
Q 044020 525 TQLRNTFGEVVAVTGDGTNDASALHEADIGL 555 (563)
Q Consensus 525 ~~l~~~~g~~v~~iGDg~ND~~~l~~a~vgi 555 (563)
+.+... .+.+++|||+.+|+.+.+.||+-.
T Consensus 152 ~~~~~~-~~~~~~igDs~~d~~aa~~aG~~~ 181 (213)
T TIGR01449 152 ERLGVA-PQQMVYVGDSRVDIQAARAAGCPS 181 (213)
T ss_pred HHcCCC-hhHeEEeCCCHHHHHHHHHCCCeE
Confidence 444333 477999999999999999999854
|
This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702). |
| >TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein | Back alignment and domain information |
|---|
Probab=98.03 E-value=1.3e-05 Score=75.19 Aligned_cols=97 Identities=21% Similarity=0.264 Sum_probs=70.1
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCceeechhhhcCCCCCCCcceeEEEecChhhHHHHH
Q 044020 445 PVRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAKECGILTSDGEAVEGPEFRNMSPADIIPKLQVMARSLPSDKHTLV 524 (563)
Q Consensus 445 ~~~~~~~~~I~~l~~~gi~v~i~TGd~~~~a~~~a~~lgi~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v 524 (563)
++.+++.+++++|+++|+++.++|+.+...+....+.+|+......++...+. ...+..|+--..++
T Consensus 75 ~~~~g~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~~l~~~f~~i~~~~~~-------------~~~KP~~~~~~~~~ 141 (205)
T TIGR01454 75 EVFPGVPELLAELRADGVGTAIATGKSGPRARSLLEALGLLPLFDHVIGSDEV-------------PRPKPAPDIVREAL 141 (205)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHcCChhheeeEEecCcC-------------CCCCCChHHHHHHH
Confidence 58899999999999999999999999999999999999986532222222111 01122233333444
Q ss_pred HHHHHhcCCEEEEEcCCccCHHHHhhCCceE
Q 044020 525 TQLRNTFGEVVAVTGDGTNDASALHEADIGL 555 (563)
Q Consensus 525 ~~l~~~~g~~v~~iGDg~ND~~~l~~a~vgi 555 (563)
+.++-. .+.+++|||+.+|+.+-+.+|+..
T Consensus 142 ~~~~~~-~~~~l~igD~~~Di~aA~~~Gi~~ 171 (205)
T TIGR01454 142 RLLDVP-PEDAVMVGDAVTDLASARAAGTAT 171 (205)
T ss_pred HHcCCC-hhheEEEcCCHHHHHHHHHcCCeE
Confidence 444433 478999999999999999999953
|
The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity. |
| >PRK10826 2-deoxyglucose-6-phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.01 E-value=1.4e-05 Score=75.96 Aligned_cols=99 Identities=15% Similarity=0.215 Sum_probs=71.2
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCceeechhhhcCCCCCCCcceeEEEecChhhHHHH
Q 044020 444 DPVRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAKECGILTSDGEAVEGPEFRNMSPADIIPKLQVMARSLPSDKHTL 523 (563)
Q Consensus 444 d~~~~~~~~~I~~l~~~gi~v~i~TGd~~~~a~~~a~~lgi~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~p~~K~~~ 523 (563)
-++.|++.++++.|+++|+++.++|+.....+..+.+.+|+......++.+... -.....|+--..+
T Consensus 91 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~~~~~~~~-------------~~~Kp~~~~~~~~ 157 (222)
T PRK10826 91 RPLLPGVREALALCKAQGLKIGLASASPLHMLEAVLTMFDLRDYFDALASAEKL-------------PYSKPHPEVYLNC 157 (222)
T ss_pred CCCCCCHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHhCcchhcccEEEEcccC-------------CCCCCCHHHHHHH
Confidence 357899999999999999999999999999999999999987644444333221 0112223322233
Q ss_pred HHHHHHhcCCEEEEEcCCccCHHHHhhCCceEe
Q 044020 524 VTQLRNTFGEVVAVTGDGTNDASALHEADIGLA 556 (563)
Q Consensus 524 v~~l~~~~g~~v~~iGDg~ND~~~l~~a~vgia 556 (563)
++.+... .+++++|||+.+|+.+.+.||+..+
T Consensus 158 ~~~~~~~-~~~~~~igDs~~Di~aA~~aG~~~i 189 (222)
T PRK10826 158 AAKLGVD-PLTCVALEDSFNGMIAAKAARMRSI 189 (222)
T ss_pred HHHcCCC-HHHeEEEcCChhhHHHHHHcCCEEE
Confidence 3333222 3789999999999999999998543
|
|
| >PRK13223 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.94 E-value=2.4e-05 Score=76.58 Aligned_cols=101 Identities=15% Similarity=0.179 Sum_probs=69.9
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCceeechhhhcCCCCCCCcceeEEEecChhhHHHH
Q 044020 444 DPVRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAKECGILTSDGEAVEGPEFRNMSPADIIPKLQVMARSLPSDKHTL 523 (563)
Q Consensus 444 d~~~~~~~~~I~~l~~~gi~v~i~TGd~~~~a~~~a~~lgi~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~p~~K~~~ 523 (563)
.++.+++.++|+.|+++|++++++|+.+...+..+.+++|+......++.+.+.. .....|+--..+
T Consensus 100 ~~~~~g~~e~L~~Lk~~g~~l~ivTn~~~~~~~~~l~~~~i~~~f~~i~~~d~~~-------------~~Kp~p~~~~~~ 166 (272)
T PRK13223 100 TVVYPGVRDTLKWLKKQGVEMALITNKPERFVAPLLDQMKIGRYFRWIIGGDTLP-------------QKKPDPAALLFV 166 (272)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEECCcHHHHHHHHHHcCcHhhCeEEEecCCCC-------------CCCCCcHHHHHH
Confidence 3688999999999999999999999999999999999999865332232222110 001112222233
Q ss_pred HHHHHHhcCCEEEEEcCCccCHHHHhhCCc-eEeec
Q 044020 524 VTQLRNTFGEVVAVTGDGTNDASALHEADI-GLAMG 558 (563)
Q Consensus 524 v~~l~~~~g~~v~~iGDg~ND~~~l~~a~v-giamg 558 (563)
++.+.-. .+.+++|||+.||+.|.+.||+ .+++.
T Consensus 167 ~~~~g~~-~~~~l~IGD~~~Di~aA~~aGi~~i~v~ 201 (272)
T PRK13223 167 MKMAGVP-PSQSLFVGDSRSDVLAAKAAGVQCVALS 201 (272)
T ss_pred HHHhCCC-hhHEEEECCCHHHHHHHHHCCCeEEEEe
Confidence 3333322 4789999999999999999998 44443
|
|
| >PRK08238 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=97.91 E-value=4.7e-05 Score=79.93 Aligned_cols=93 Identities=18% Similarity=0.263 Sum_probs=71.3
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCceeechhhhcCCCCCCCcceeEEEecChhhHHHHH
Q 044020 445 PVRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAKECGILTSDGEAVEGPEFRNMSPADIIPKLQVMARSLPSDKHTLV 524 (563)
Q Consensus 445 ~~~~~~~~~I~~l~~~gi~v~i~TGd~~~~a~~~a~~lgi~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v 524 (563)
+++|++.+.+++++++|++++++|+.+...+..+++.+|+.+ .++.+++. .+..|+.|.+.+
T Consensus 72 p~~pga~e~L~~lk~~G~~v~LaTas~~~~a~~i~~~lGlFd---~Vigsd~~---------------~~~kg~~K~~~l 133 (479)
T PRK08238 72 PYNEEVLDYLRAERAAGRKLVLATASDERLAQAVAAHLGLFD---GVFASDGT---------------TNLKGAAKAAAL 133 (479)
T ss_pred CCChhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCC---EEEeCCCc---------------cccCCchHHHHH
Confidence 478999999999999999999999999999999999999721 22222110 124456676554
Q ss_pred HHHHHhcCCE-EEEEcCCccCHHHHhhCCceEeec
Q 044020 525 TQLRNTFGEV-VAVTGDGTNDASALHEADIGLAMG 558 (563)
Q Consensus 525 ~~l~~~~g~~-v~~iGDg~ND~~~l~~a~vgiamg 558 (563)
+.. +++. +.++||+.+|++|++.|+-.++++
T Consensus 134 ~~~---l~~~~~~yvGDS~~Dlp~~~~A~~av~Vn 165 (479)
T PRK08238 134 VEA---FGERGFDYAGNSAADLPVWAAARRAIVVG 165 (479)
T ss_pred HHH---hCccCeeEecCCHHHHHHHHhCCCeEEEC
Confidence 432 2433 678899999999999999999987
|
|
| >PRK13288 pyrophosphatase PpaX; Provisional | Back alignment and domain information |
|---|
Probab=97.89 E-value=2.4e-05 Score=73.82 Aligned_cols=95 Identities=19% Similarity=0.109 Sum_probs=69.6
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCceeechhhhcCCCCCCCcceeEEEecChhhHHHHHH
Q 044020 446 VRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAKECGILTSDGEAVEGPEFRNMSPADIIPKLQVMARSLPSDKHTLVT 525 (563)
Q Consensus 446 ~~~~~~~~I~~l~~~gi~v~i~TGd~~~~a~~~a~~lgi~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~ 525 (563)
+.|++.++++.|+++|+++.++|+.....+....+.+|+......++...+.. .....|+--..+++
T Consensus 83 ~~~g~~~~l~~L~~~g~~~~i~S~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~-------------~~Kp~p~~~~~~~~ 149 (214)
T PRK13288 83 EYETVYETLKTLKKQGYKLGIVTTKMRDTVEMGLKLTGLDEFFDVVITLDDVE-------------HAKPDPEPVLKALE 149 (214)
T ss_pred cCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChhceeEEEecCcCC-------------CCCCCcHHHHHHHH
Confidence 78999999999999999999999999999999999999976333333322110 01122333334444
Q ss_pred HHHHhcCCEEEEEcCCccCHHHHhhCCce
Q 044020 526 QLRNTFGEVVAVTGDGTNDASALHEADIG 554 (563)
Q Consensus 526 ~l~~~~g~~v~~iGDg~ND~~~l~~a~vg 554 (563)
.+... ...+++|||+.+|+.+-++||+-
T Consensus 150 ~~~~~-~~~~~~iGDs~~Di~aa~~aG~~ 177 (214)
T PRK13288 150 LLGAK-PEEALMVGDNHHDILAGKNAGTK 177 (214)
T ss_pred HcCCC-HHHEEEECCCHHHHHHHHHCCCe
Confidence 44433 46899999999999999999983
|
|
| >PRK13226 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.88 E-value=4.1e-05 Score=73.04 Aligned_cols=97 Identities=19% Similarity=0.129 Sum_probs=72.6
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCceeechhhhcCCCCCCCcceeEEEecChhhHHHHH
Q 044020 445 PVRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAKECGILTSDGEAVEGPEFRNMSPADIIPKLQVMARSLPSDKHTLV 524 (563)
Q Consensus 445 ~~~~~~~~~I~~l~~~gi~v~i~TGd~~~~a~~~a~~lgi~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v 524 (563)
++.|++.+.++.|+++|+++.++|+.+...+..+.+.+|+......++.+.+. -.....|+--..++
T Consensus 95 ~~~pg~~~~L~~L~~~g~~l~i~Tn~~~~~~~~~l~~~~l~~~f~~i~~~~~~-------------~~~KP~p~~~~~~~ 161 (229)
T PRK13226 95 QLFDGVEGMLQRLECAGCVWGIVTNKPEYLARLILPQLGWEQRCAVLIGGDTL-------------AERKPHPLPLLVAA 161 (229)
T ss_pred eeCCCHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCchhcccEEEecCcC-------------CCCCCCHHHHHHHH
Confidence 47899999999999999999999999998888899999987543333333221 11123344444555
Q ss_pred HHHHHhcCCEEEEEcCCccCHHHHhhCCceE
Q 044020 525 TQLRNTFGEVVAVTGDGTNDASALHEADIGL 555 (563)
Q Consensus 525 ~~l~~~~g~~v~~iGDg~ND~~~l~~a~vgi 555 (563)
+.+... .+.+++|||+.+|+.|-+.||+..
T Consensus 162 ~~l~~~-p~~~l~IGDs~~Di~aA~~aG~~~ 191 (229)
T PRK13226 162 ERIGVA-PTDCVYVGDDERDILAARAAGMPS 191 (229)
T ss_pred HHhCCC-hhhEEEeCCCHHHHHHHHHCCCcE
Confidence 555544 578999999999999999999853
|
|
| >PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria [] | Back alignment and domain information |
|---|
Probab=97.84 E-value=4.3e-05 Score=73.57 Aligned_cols=44 Identities=32% Similarity=0.494 Sum_probs=37.0
Q ss_pred hhHHHHHHHHHHhcC---CEEEEEcCCccCHHHHhhCCceEeecCCCC
Q 044020 518 SDKHTLVTQLRNTFG---EVVAVTGDGTNDASALHEADIGLAMGIAGT 562 (563)
Q Consensus 518 ~~K~~~v~~l~~~~g---~~v~~iGDg~ND~~~l~~a~vgiamg~~~~ 562 (563)
..|...++.++++++ +.|+++||+.||.+||..++.||.+| |+.
T Consensus 164 a~K~~Al~~L~~~~~~~~~~vl~aGDSgND~~mL~~~~~~vvV~-Na~ 210 (247)
T PF05116_consen 164 ASKGAALRYLMERWGIPPEQVLVAGDSGNDLEMLEGGDHGVVVG-NAQ 210 (247)
T ss_dssp -SHHHHHHHHHHHHT--GGGEEEEESSGGGHHHHCCSSEEEE-T-TS-
T ss_pred CCHHHHHHHHHHHhCCCHHHEEEEeCCCCcHHHHcCcCCEEEEc-CCC
Confidence 469999999998865 47888999999999999999999999 774
|
SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B .... |
| >TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548 | Back alignment and domain information |
|---|
Probab=97.83 E-value=5.2e-05 Score=70.51 Aligned_cols=94 Identities=16% Similarity=0.059 Sum_probs=69.8
Q ss_pred cCCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCceeechhhhcCCCCCCCcceeEEEecChhhHHH
Q 044020 443 KDPVRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAKECGILTSDGEAVEGPEFRNMSPADIIPKLQVMARSLPSDKHT 522 (563)
Q Consensus 443 ~d~~~~~~~~~I~~l~~~gi~v~i~TGd~~~~a~~~a~~lgi~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~p~~K~~ 522 (563)
.+++.+...++++.|+++|+++.++||.+...+..+.+.+|+......++.+.+ +.....|+.-..
T Consensus 104 ~~~~~~~~~~~L~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~f~~~~~~~~--------------~~~KP~p~~~~~ 169 (197)
T TIGR01548 104 EDETLLTPKGLLRELHRAPKGMAVVTGRPRKDAAKFLTTHGLEILFPVQIWMED--------------CPPKPNPEPLIL 169 (197)
T ss_pred ccccccCHHHHHHHHHHcCCcEEEECCCCHHHHHHHHHHcCchhhCCEEEeecC--------------CCCCcCHHHHHH
Confidence 344666779999999999999999999999999999999999764444433332 111334544455
Q ss_pred HHHHHHHhcCCEEEEEcCCccCHHHHhhC
Q 044020 523 LVTQLRNTFGEVVAVTGDGTNDASALHEA 551 (563)
Q Consensus 523 ~v~~l~~~~g~~v~~iGDg~ND~~~l~~a 551 (563)
+++.+... .+.+++|||+.+|+.+-+.|
T Consensus 170 ~~~~~~~~-~~~~i~vGD~~~Di~aA~~a 197 (197)
T TIGR01548 170 AAKALGVE-ACHAAMVGDTVDDIITGRKA 197 (197)
T ss_pred HHHHhCcC-cccEEEEeCCHHHHHHHHhC
Confidence 56665554 57899999999999987654
|
All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's. |
| >PRK11590 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=97.82 E-value=0.00018 Score=67.67 Aligned_cols=106 Identities=13% Similarity=0.084 Sum_probs=73.9
Q ss_pred CCCcchHHHH-HHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCceeechhhhcCCCCCCCcceeEEEecChhhHHHH
Q 044020 445 PVRPGVKEAV-QTCLEAGITVRMVTGDNINTARAIAKECGILTSDGEAVEGPEFRNMSPADIIPKLQVMARSLPSDKHTL 523 (563)
Q Consensus 445 ~~~~~~~~~I-~~l~~~gi~v~i~TGd~~~~a~~~a~~lgi~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~p~~K~~~ 523 (563)
.+.|++.+.| +.+++.|++++++|+.+..-+..+++.+|+..... ++ |..++... ..++ .-..+..++|..-
T Consensus 95 ~~~pga~e~L~~~l~~~G~~l~IvSas~~~~~~~il~~l~~~~~~~-~i-~t~l~~~~----tg~~-~g~~c~g~~K~~~ 167 (211)
T PRK11590 95 TAFPVVQERLTTYLLSSDADVWLITGSPQPLVEQVYFDTPWLPRVN-LI-ASQMQRRY----GGWV-LTLRCLGHEKVAQ 167 (211)
T ss_pred cCCccHHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHccccccCc-eE-EEEEEEEE----ccEE-CCccCCChHHHHH
Confidence 3589999999 57888999999999999999999999999632111 11 22221100 0000 1123556788887
Q ss_pred HHHHH-HhcCCEEEEEcCCccCHHHHhhCCceEeec
Q 044020 524 VTQLR-NTFGEVVAVTGDGTNDASALHEADIGLAMG 558 (563)
Q Consensus 524 v~~l~-~~~g~~v~~iGDg~ND~~~l~~a~vgiamg 558 (563)
++.+- .. .....+-||+.||.|||+.|+.++++.
T Consensus 168 l~~~~~~~-~~~~~aY~Ds~~D~pmL~~a~~~~~vn 202 (211)
T PRK11590 168 LERKIGTP-LRLYSGYSDSKQDNPLLYFCQHRWRVT 202 (211)
T ss_pred HHHHhCCC-cceEEEecCCcccHHHHHhCCCCEEEC
Confidence 77553 22 345567799999999999999999885
|
|
| >TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB | Back alignment and domain information |
|---|
Probab=97.80 E-value=0.00017 Score=67.61 Aligned_cols=107 Identities=12% Similarity=0.088 Sum_probs=74.3
Q ss_pred CCCcchHHHHH-HHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCceeechhhhcCCCCCCCcceeEEEecChhhHHHH
Q 044020 445 PVRPGVKEAVQ-TCLEAGITVRMVTGDNINTARAIAKECGILTSDGEAVEGPEFRNMSPADIIPKLQVMARSLPSDKHTL 523 (563)
Q Consensus 445 ~~~~~~~~~I~-~l~~~gi~v~i~TGd~~~~a~~~a~~lgi~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~p~~K~~~ 523 (563)
.+.|++.+.|+ .++++|++++++|+-+..-+.++++..++..... ++ |.+++.... ..+ .-..+.-++|..-
T Consensus 94 ~l~pga~e~L~~~l~~~G~~v~IvSas~~~~~~~ia~~~~~~~~~~-~i-~t~le~~~g----g~~-~g~~c~g~~Kv~r 166 (210)
T TIGR01545 94 TAFPLVAERLRQYLESSDADIWLITGSPQPLVEAVYFDSNFIHRLN-LI-ASQIERGNG----GWV-LPLRCLGHEKVAQ 166 (210)
T ss_pred CCCccHHHHHHHHHHhCCCEEEEEcCCcHHHHHHHHHhccccccCc-EE-EEEeEEeCC----ceE-cCccCCChHHHHH
Confidence 47899999996 7888999999999999999999999976633211 11 222221000 000 1123556788887
Q ss_pred HHHHHHhcCCEEEEEcCCccCHHHHhhCCceEeec
Q 044020 524 VTQLRNTFGEVVAVTGDGTNDASALHEADIGLAMG 558 (563)
Q Consensus 524 v~~l~~~~g~~v~~iGDg~ND~~~l~~a~vgiamg 558 (563)
++.+-..-.....+-||+.||.|||+.||..+++.
T Consensus 167 l~~~~~~~~~~~~aYsDS~~D~pmL~~a~~~~~Vn 201 (210)
T TIGR01545 167 LEQKIGSPLKLYSGYSDSKQDNPLLAFCEHRWRVS 201 (210)
T ss_pred HHHHhCCChhheEEecCCcccHHHHHhCCCcEEEC
Confidence 76554221245567799999999999999999885
|
The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene. |
| >smart00775 LNS2 LNS2 domain | Back alignment and domain information |
|---|
Probab=97.80 E-value=0.00013 Score=64.82 Aligned_cols=105 Identities=17% Similarity=0.218 Sum_probs=70.0
Q ss_pred cCCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHH---HHHHHc---C--CCCCCCceeechhhhcCCCCCCCcceeEEEe
Q 044020 443 KDPVRPGVKEAVQTCLEAGITVRMVTGDNINTAR---AIAKEC---G--ILTSDGEAVEGPEFRNMSPADIIPKLQVMAR 514 (563)
Q Consensus 443 ~d~~~~~~~~~I~~l~~~gi~v~i~TGd~~~~a~---~~a~~l---g--i~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~ 514 (563)
++.+.+++.+++++++++|++++++|||+...+. .+.+++ | +........+|..+... .+ .+..+
T Consensus 25 ~~~~~~~~~~a~~~l~~~G~~ivy~TGRp~~~~~~t~~~l~~~~~~~~~lp~g~li~~~g~~~~~~------~~-e~i~~ 97 (157)
T smart00775 25 KDWTHPGVAKLYRDIQNNGYKILYLTARPIGQADRTRSYLSQIKQDGHNLPHGPVLLSPDRLFAAL------HR-EVISK 97 (157)
T ss_pred cCcCCHHHHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHHHHHhhhccccCCCceEEEcCCcchhhh------hc-ccccC
Confidence 4678999999999999999999999999988874 666662 3 33211111222221100 00 12222
Q ss_pred cChhhHHHHHHHHHHhc----CCEEEEEcCCccCHHHHhhCCce
Q 044020 515 SLPSDKHTLVTQLRNTF----GEVVAVTGDGTNDASALHEADIG 554 (563)
Q Consensus 515 ~~p~~K~~~v~~l~~~~----g~~v~~iGDg~ND~~~l~~a~vg 554 (563)
...+.|...++.+.+.+ ...++.+||+.+|+.+.+++|+.
T Consensus 98 ~~~~~K~~~l~~i~~~~~~~~~~f~~~~gn~~~D~~~y~~~gi~ 141 (157)
T smart00775 98 KPEVFKIACLRDIKSLFPPQGNPFYAGFGNRITDVISYSAVGIP 141 (157)
T ss_pred CHHHHHHHHHHHHHHhcCCCCCCEEEEeCCCchhHHHHHHcCCC
Confidence 22235888888888743 35778899999999999998874
|
This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance. |
| >PLN02770 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=97.76 E-value=6.9e-05 Score=72.41 Aligned_cols=96 Identities=16% Similarity=0.098 Sum_probs=75.1
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCceeechhhhcCCCCCCCcceeEEEecChhhHHHHH
Q 044020 445 PVRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAKECGILTSDGEAVEGPEFRNMSPADIIPKLQVMARSLPSDKHTLV 524 (563)
Q Consensus 445 ~~~~~~~~~I~~l~~~gi~v~i~TGd~~~~a~~~a~~lgi~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v 524 (563)
++.|++.++++.|+++|+++.++|+.+...+....+.+|+......++.+.+.. .....|+--..++
T Consensus 108 ~l~pgv~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~Fd~iv~~~~~~-------------~~KP~p~~~~~a~ 174 (248)
T PLN02770 108 KPLNGLYKLKKWIEDRGLKRAAVTNAPRENAELMISLLGLSDFFQAVIIGSECE-------------HAKPHPDPYLKAL 174 (248)
T ss_pred CcCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCChhhCcEEEecCcCC-------------CCCCChHHHHHHH
Confidence 478899999999999999999999999999999999999987555555554421 1133344445555
Q ss_pred HHHHHhcCCEEEEEcCCccCHHHHhhCCce
Q 044020 525 TQLRNTFGEVVAVTGDGTNDASALHEADIG 554 (563)
Q Consensus 525 ~~l~~~~g~~v~~iGDg~ND~~~l~~a~vg 554 (563)
+.+... .+.+++|||+.+|+.+-+.||+-
T Consensus 175 ~~~~~~-~~~~l~vgDs~~Di~aA~~aGi~ 203 (248)
T PLN02770 175 EVLKVS-KDHTFVFEDSVSGIKAGVAAGMP 203 (248)
T ss_pred HHhCCC-hhHEEEEcCCHHHHHHHHHCCCE
Confidence 555544 57899999999999999999984
|
|
| >TIGR03351 PhnX-like phosphonatase-like hydrolase | Back alignment and domain information |
|---|
Probab=97.74 E-value=8.3e-05 Score=70.45 Aligned_cols=99 Identities=25% Similarity=0.246 Sum_probs=71.4
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCC--CCCCceeechhhhcCCCCCCCcceeEEEecChhhHH
Q 044020 444 DPVRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAKECGIL--TSDGEAVEGPEFRNMSPADIIPKLQVMARSLPSDKH 521 (563)
Q Consensus 444 d~~~~~~~~~I~~l~~~gi~v~i~TGd~~~~a~~~a~~lgi~--~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~p~~K~ 521 (563)
.++.+++.+.++.|+++|+++.++|+.....+....+.+|+. .....++.+.+.. ..+..|+--.
T Consensus 86 ~~l~~G~~~~L~~L~~~g~~~~ivT~~~~~~~~~~l~~~~l~~~~~f~~i~~~~~~~-------------~~KP~p~~~~ 152 (220)
T TIGR03351 86 PVALPGAEEAFRSLRSSGIKVALTTGFDRDTAERLLEKLGWTVGDDVDAVVCPSDVA-------------AGRPAPDLIL 152 (220)
T ss_pred CccCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHhhhhhhccCCEEEcCCcCC-------------CCCCCHHHHH
Confidence 369999999999999999999999999999999999999987 4333343333210 0112233223
Q ss_pred HHHHHHHHhcCCEEEEEcCCccCHHHHhhCCceE
Q 044020 522 TLVTQLRNTFGEVVAVTGDGTNDASALHEADIGL 555 (563)
Q Consensus 522 ~~v~~l~~~~g~~v~~iGDg~ND~~~l~~a~vgi 555 (563)
..++.+...-++.+++|||+.+|+.+-+.||+..
T Consensus 153 ~a~~~~~~~~~~~~~~igD~~~Di~aa~~aG~~~ 186 (220)
T TIGR03351 153 RAMELTGVQDVQSVAVAGDTPNDLEAGINAGAGA 186 (220)
T ss_pred HHHHHcCCCChhHeEEeCCCHHHHHHHHHCCCCe
Confidence 3333333210267999999999999999999986
|
This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the |
| >TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase | Back alignment and domain information |
|---|
Probab=97.73 E-value=0.0001 Score=71.48 Aligned_cols=96 Identities=19% Similarity=0.145 Sum_probs=69.6
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCC-CceeechhhhcCCCCCCCcceeEEEecChhhHHHH
Q 044020 445 PVRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAKECGILTSD-GEAVEGPEFRNMSPADIIPKLQVMARSLPSDKHTL 523 (563)
Q Consensus 445 ~~~~~~~~~I~~l~~~gi~v~i~TGd~~~~a~~~a~~lgi~~~~-~~~~~g~~~~~~~~~~~~~~~~v~~~~~p~~K~~~ 523 (563)
++.|++.+.++.|+++|+++.++|+.+...+..+.+++|+.... ..++.+.+.. .....|+--...
T Consensus 99 ~~~pg~~e~L~~L~~~g~~l~IvT~~~~~~~~~~l~~~gl~~~f~d~ii~~~~~~-------------~~KP~p~~~~~a 165 (253)
T TIGR01422 99 SPIPGVIEVIAYLRARGIKIGSTTGYTREMMDVVAPEAALQGYRPDYNVTTDDVP-------------AGRPAPWMALKN 165 (253)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHHHHhcCCCCceEEccccCC-------------CCCCCHHHHHHH
Confidence 36799999999999999999999999999999999999987642 3333333210 112233333344
Q ss_pred HHHHHHhcCCEEEEEcCCccCHHHHhhCCc
Q 044020 524 VTQLRNTFGEVVAVTGDGTNDASALHEADI 553 (563)
Q Consensus 524 v~~l~~~~g~~v~~iGDg~ND~~~l~~a~v 553 (563)
++.+...-.+.+++|||+.+|+.+-+.||+
T Consensus 166 ~~~l~~~~~~~~l~IGDs~~Di~aA~~aGi 195 (253)
T TIGR01422 166 AIELGVYDVAACVKVGDTVPDIEEGRNAGM 195 (253)
T ss_pred HHHcCCCCchheEEECCcHHHHHHHHHCCC
Confidence 444432103579999999999999999998
|
This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent. |
| >TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II | Back alignment and domain information |
|---|
Probab=97.69 E-value=0.00013 Score=67.91 Aligned_cols=96 Identities=13% Similarity=0.189 Sum_probs=70.3
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCceeechhhhcCCCCCCCcceeEEEecChhhHHHHH
Q 044020 445 PVRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAKECGILTSDGEAVEGPEFRNMSPADIIPKLQVMARSLPSDKHTLV 524 (563)
Q Consensus 445 ~~~~~~~~~I~~l~~~gi~v~i~TGd~~~~a~~~a~~lgi~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v 524 (563)
++.|++.+++++|+++|+++.++|+-+...+....+.+|+......++...+.. .....|+--..++
T Consensus 92 ~~~~~~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~gl~~~fd~i~~s~~~~-------------~~KP~~~~~~~~~ 158 (198)
T TIGR01428 92 PPHPDVPAGLRALKERGYRLAILSNGSPAMLKSLVKHAGLDDPFDAVLSADAVR-------------AYKPAPQVYQLAL 158 (198)
T ss_pred CCCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHCCChhhhheeEehhhcC-------------CCCCCHHHHHHHH
Confidence 478999999999999999999999999999999999999865433333333211 1112233223444
Q ss_pred HHHHHhcCCEEEEEcCCccCHHHHhhCCce
Q 044020 525 TQLRNTFGEVVAVTGDGTNDASALHEADIG 554 (563)
Q Consensus 525 ~~l~~~~g~~v~~iGDg~ND~~~l~~a~vg 554 (563)
+.+... .+.+++|||+.+|+.+-+.+|+-
T Consensus 159 ~~~~~~-p~~~~~vgD~~~Di~~A~~~G~~ 187 (198)
T TIGR01428 159 EALGVP-PDEVLFVASNPWDLGGAKKFGFK 187 (198)
T ss_pred HHhCCC-hhhEEEEeCCHHHHHHHHHCCCc
Confidence 444443 57899999999999999999984
|
Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related. |
| >TIGR01990 bPGM beta-phosphoglucomutase | Back alignment and domain information |
|---|
Probab=97.67 E-value=8.2e-05 Score=68.31 Aligned_cols=94 Identities=15% Similarity=0.171 Sum_probs=64.9
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCceeechhhhcCCCCCCCcceeEEEecChhhHHHHH
Q 044020 445 PVRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAKECGILTSDGEAVEGPEFRNMSPADIIPKLQVMARSLPSDKHTLV 524 (563)
Q Consensus 445 ~~~~~~~~~I~~l~~~gi~v~i~TGd~~~~a~~~a~~lgi~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v 524 (563)
++.|++.++|+.|+++|+++.++|+... +....+.+|+......++.+.+. -..+..|+--..++
T Consensus 87 ~~~pg~~~~L~~L~~~g~~~~i~s~~~~--~~~~l~~~~l~~~f~~~~~~~~~-------------~~~kp~p~~~~~~~ 151 (185)
T TIGR01990 87 DVLPGIKNLLDDLKKNNIKIALASASKN--APTVLEKLGLIDYFDAIVDPAEI-------------KKGKPDPEIFLAAA 151 (185)
T ss_pred ccCccHHHHHHHHHHCCCeEEEEeCCcc--HHHHHHhcCcHhhCcEEEehhhc-------------CCCCCChHHHHHHH
Confidence 5789999999999999999999998543 46678889987544444433321 11122233223344
Q ss_pred HHHHHhcCCEEEEEcCCccCHHHHhhCCce
Q 044020 525 TQLRNTFGEVVAVTGDGTNDASALHEADIG 554 (563)
Q Consensus 525 ~~l~~~~g~~v~~iGDg~ND~~~l~~a~vg 554 (563)
+.+.-. .+.+++|||+.+|+.+-+.+|+-
T Consensus 152 ~~~~~~-~~~~v~vgD~~~di~aA~~aG~~ 180 (185)
T TIGR01990 152 EGLGVS-PSECIGIEDAQAGIEAIKAAGMF 180 (185)
T ss_pred HHcCCC-HHHeEEEecCHHHHHHHHHcCCE
Confidence 444332 36799999999999999999984
|
The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state. |
| >PLN03243 haloacid dehalogenase-like hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=97.67 E-value=0.00011 Score=71.20 Aligned_cols=96 Identities=16% Similarity=0.150 Sum_probs=74.3
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCceeechhhhcCCCCCCCcceeEEEecChhhHHHHH
Q 044020 445 PVRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAKECGILTSDGEAVEGPEFRNMSPADIIPKLQVMARSLPSDKHTLV 524 (563)
Q Consensus 445 ~~~~~~~~~I~~l~~~gi~v~i~TGd~~~~a~~~a~~lgi~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v 524 (563)
++.+++.+.++.|+++|+++.++|+.+...+..+.+.+|+......++.+.+.. .....|+--..++
T Consensus 109 ~l~pg~~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~Fd~ii~~~d~~-------------~~KP~Pe~~~~a~ 175 (260)
T PLN03243 109 RLRPGSREFVQALKKHEIPIAVASTRPRRYLERAIEAVGMEGFFSVVLAAEDVY-------------RGKPDPEMFMYAA 175 (260)
T ss_pred ccCCCHHHHHHHHHHCCCEEEEEeCcCHHHHHHHHHHcCCHhhCcEEEecccCC-------------CCCCCHHHHHHHH
Confidence 468999999999999999999999999999999999999976555555554321 1123344444555
Q ss_pred HHHHHhcCCEEEEEcCCccCHHHHhhCCce
Q 044020 525 TQLRNTFGEVVAVTGDGTNDASALHEADIG 554 (563)
Q Consensus 525 ~~l~~~~g~~v~~iGDg~ND~~~l~~a~vg 554 (563)
+.+.-. .+.+++|||+.+|+.+-+.||+-
T Consensus 176 ~~l~~~-p~~~l~IgDs~~Di~aA~~aG~~ 204 (260)
T PLN03243 176 ERLGFI-PERCIVFGNSNSSVEAAHDGCMK 204 (260)
T ss_pred HHhCCC-hHHeEEEcCCHHHHHHHHHcCCE
Confidence 555544 57899999999999999999984
|
|
| >TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544 | Back alignment and domain information |
|---|
Probab=97.66 E-value=0.00029 Score=67.89 Aligned_cols=103 Identities=12% Similarity=0.101 Sum_probs=64.7
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCceeechhhhcCCCCCCCcceeEEEecChhhHHHH
Q 044020 444 DPVRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAKECGILTSDGEAVEGPEFRNMSPADIIPKLQVMARSLPSDKHTL 523 (563)
Q Consensus 444 d~~~~~~~~~I~~l~~~gi~v~i~TGd~~~~a~~~a~~lgi~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~p~~K~~~ 523 (563)
-+++|++.+.++.|++.|+++.++||-....+..+++++|+...+..++... +..-....... . .-.-+....|.+.
T Consensus 120 l~l~pG~~efl~~L~~~GIpv~IvS~G~~~~Ie~vL~~lgl~~~~~~IvSN~-L~f~~dGvltG-~-~~P~i~~~~K~~~ 196 (277)
T TIGR01544 120 VMLKDGYENFFDKLQQHSIPVFIFSAGIGNVLEEVLRQAGVYHPNVKVVSNF-MDFDEDGVLKG-F-KGPLIHTFNKNHD 196 (277)
T ss_pred CccCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHHcCCCCcCceEEeee-EEECCCCeEeC-C-CCCcccccccHHH
Confidence 3489999999999999999999999999999999999999865443331110 00000000000 0 0000111345544
Q ss_pred HH-HHHHhcC-----CEEEEEcCCccCHHHHh
Q 044020 524 VT-QLRNTFG-----EVVAVTGDGTNDASALH 549 (563)
Q Consensus 524 v~-~l~~~~g-----~~v~~iGDg~ND~~~l~ 549 (563)
+. ...+.++ ..++++|||.||+.|..
T Consensus 197 v~~~~~~~~~~~~~~~~vI~vGDs~~Dl~ma~ 228 (277)
T TIGR01544 197 VALRNTEYFNQLKDRSNIILLGDSQGDLRMAD 228 (277)
T ss_pred HHHHHHHHhCccCCcceEEEECcChhhhhHhc
Confidence 33 2333223 67999999999999944
|
This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB. |
| >TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA | Back alignment and domain information |
|---|
Probab=97.63 E-value=0.00035 Score=60.27 Aligned_cols=93 Identities=19% Similarity=0.163 Sum_probs=64.9
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCC--------HHHHHHHHHHcCCCCCCCceeechhhhcCCCCCCCcceeEEEec
Q 044020 444 DPVRPGVKEAVQTCLEAGITVRMVTGDN--------INTARAIAKECGILTSDGEAVEGPEFRNMSPADIIPKLQVMARS 515 (563)
Q Consensus 444 d~~~~~~~~~I~~l~~~gi~v~i~TGd~--------~~~a~~~a~~lgi~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~ 515 (563)
.++.+++.++++.|+++|++++++|+.. ...+..+.+.+|+.... ..+.+ -....
T Consensus 24 ~~~~~~v~~~l~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~~l~~~~l~~~~-~~~~~----------------~~~KP 86 (132)
T TIGR01662 24 RILYPEVPDALAELKEAGYKVVIVTNQSGIGRGKFSSGRVARRLEELGVPIDV-LYACP----------------HCRKP 86 (132)
T ss_pred heeCCCHHHHHHHHHHCCCEEEEEECCccccccHHHHHHHHHHHHHCCCCEEE-EEECC----------------CCCCC
Confidence 3678999999999999999999999998 77888899999885210 00000 00011
Q ss_pred ChhhHHHHHHHHH-HhcCCEEEEEcC-CccCHHHHhhCCce
Q 044020 516 LPSDKHTLVTQLR-NTFGEVVAVTGD-GTNDASALHEADIG 554 (563)
Q Consensus 516 ~p~~K~~~v~~l~-~~~g~~v~~iGD-g~ND~~~l~~a~vg 554 (563)
.|+--..+++.++ -. .+++++||| ..+|+.+-+.+|+-
T Consensus 87 ~~~~~~~~~~~~~~~~-~~~~v~IGD~~~~Di~~A~~~Gi~ 126 (132)
T TIGR01662 87 KPGMFLEALKRFNEID-PEESVYVGDQDLTDLQAAKRAGLA 126 (132)
T ss_pred ChHHHHHHHHHcCCCC-hhheEEEcCCCcccHHHHHHCCCe
Confidence 2222234444442 33 478999999 69999999999983
|
In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme. |
| >TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253 | Back alignment and domain information |
|---|
Probab=97.60 E-value=0.00015 Score=68.79 Aligned_cols=100 Identities=15% Similarity=0.178 Sum_probs=71.1
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCceeechhhhcCCCCCCCcceeEEEecChhhHHHHH
Q 044020 445 PVRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAKECGILTSDGEAVEGPEFRNMSPADIIPKLQVMARSLPSDKHTLV 524 (563)
Q Consensus 445 ~~~~~~~~~I~~l~~~gi~v~i~TGd~~~~a~~~a~~lgi~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v 524 (563)
++.|++.++++.|+++|++++++|+.+...+....+.+|+......++.+.+.. .....|+--..++
T Consensus 94 ~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~l~~~f~~i~~~~~~~-------------~~KP~~~~~~~~~ 160 (221)
T TIGR02253 94 RVYPGVRDTLMELRESGYRLGIITDGLPVKQWEKLERLGVRDFFDAVITSEEEG-------------VEKPHPKIFYAAL 160 (221)
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHhCChHHhccEEEEeccCC-------------CCCCCHHHHHHHH
Confidence 478999999999999999999999999888899999999875433333332210 1122233333444
Q ss_pred HHHHHhcCCEEEEEcCCc-cCHHHHhhCCc-eEeec
Q 044020 525 TQLRNTFGEVVAVTGDGT-NDASALHEADI-GLAMG 558 (563)
Q Consensus 525 ~~l~~~~g~~v~~iGDg~-ND~~~l~~a~v-giamg 558 (563)
+.+... ...+++|||+. +|+.+-+.||+ .|.+.
T Consensus 161 ~~~~~~-~~~~~~igDs~~~di~~A~~aG~~~i~~~ 195 (221)
T TIGR02253 161 KRLGVK-PEEAVMVGDRLDKDIKGAKNLGMKTVWIN 195 (221)
T ss_pred HHcCCC-hhhEEEECCChHHHHHHHHHCCCEEEEEC
Confidence 444333 46899999998 99999999998 44443
|
This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). |
| >PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional | Back alignment and domain information |
|---|
Probab=97.58 E-value=0.00029 Score=78.87 Aligned_cols=117 Identities=18% Similarity=0.289 Sum_probs=75.0
Q ss_pred CCCcchHHHHHHHHh-CCCeEEEEcCCCHHHHHHHHHHcCCC--CCCCceee--chhhhcCC--CC--------------
Q 044020 445 PVRPGVKEAVQTCLE-AGITVRMVTGDNINTARAIAKECGIL--TSDGEAVE--GPEFRNMS--PA-------------- 503 (563)
Q Consensus 445 ~~~~~~~~~I~~l~~-~gi~v~i~TGd~~~~a~~~a~~lgi~--~~~~~~~~--g~~~~~~~--~~-------------- 503 (563)
.+.+++.++|++|.+ .|+.|+++|||+..........+++. ..+...+. +....... ..
T Consensus 514 ~~~~~~~~~L~~L~~d~g~~V~ivSGR~~~~l~~~~~~~~l~liaenG~~i~~~~~~w~~~~~~~~~w~~~v~~il~~~~ 593 (726)
T PRK14501 514 VPDKELRDLLRRLAADPNTDVAIISGRDRDTLERWFGDLPIHLVAEHGAWSRAPGGEWQLLEPVATEWKDAVRPILEEFV 593 (726)
T ss_pred CCCHHHHHHHHHHHcCCCCeEEEEeCCCHHHHHHHhCCCCeEEEEeCCEEEeCCCCceEECCCcchhHHHHHHHHHHHHH
Confidence 467899999999999 59999999999999998887765531 11111110 11100000 00
Q ss_pred ---------------------------------------CCCc--ceeE-----EEecCh--hhHHHHHHHHHHhc-CCE
Q 044020 504 ---------------------------------------DIIP--KLQV-----MARSLP--SDKHTLVTQLRNTF-GEV 534 (563)
Q Consensus 504 ---------------------------------------~~~~--~~~v-----~~~~~p--~~K~~~v~~l~~~~-g~~ 534 (563)
.... ...+ +.++.| ..|+..++.+.+.. .+.
T Consensus 594 ~~~~gs~ie~k~~~l~~~~r~~d~~~~~~~a~~l~~~l~~~~~~~~~~v~~g~~~veV~p~~vnKG~al~~ll~~~~~d~ 673 (726)
T PRK14501 594 DRTPGSFIEEKEASLAWHYRNADPELGEARANELILALSSLLSNAPLEVLRGNKVVEVRPAGVNKGRAVRRLLEAGPYDF 673 (726)
T ss_pred hcCCCcEEEEcceEEEEEccCCCHHHHHHHHHHHHHHHHHHhcCCCeEEEECCeEEEEEECCCCHHHHHHHHHhcCCCCE
Confidence 0000 0001 112333 36888888887753 268
Q ss_pred EEEEcCCccCHHHHhhC---CceEeecCCCC
Q 044020 535 VAVTGDGTNDASALHEA---DIGLAMGIAGT 562 (563)
Q Consensus 535 v~~iGDg~ND~~~l~~a---~vgiamg~~~~ 562 (563)
++++||+.||.+||+.+ +++|+|| ++.
T Consensus 674 vl~~GD~~nDe~Mf~~~~~~~~~v~vG-~~~ 703 (726)
T PRK14501 674 VLAIGDDTTDEDMFRALPETAITVKVG-PGE 703 (726)
T ss_pred EEEECCCCChHHHHHhcccCceEEEEC-CCC
Confidence 99999999999999996 7999999 653
|
|
| >PRK13225 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.55 E-value=0.0003 Score=68.66 Aligned_cols=90 Identities=17% Similarity=0.225 Sum_probs=67.5
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCceeechhhhcCCCCCCCcceeEEEecChhhHHHHH
Q 044020 445 PVRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAKECGILTSDGEAVEGPEFRNMSPADIIPKLQVMARSLPSDKHTLV 524 (563)
Q Consensus 445 ~~~~~~~~~I~~l~~~gi~v~i~TGd~~~~a~~~a~~lgi~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v 524 (563)
++.|++.+.++.|+++|+++.++|+.....+....+.+|+......++.+.+ .+ .|...+
T Consensus 142 ~l~pg~~e~L~~L~~~gi~laIvSn~~~~~~~~~L~~~gl~~~F~~vi~~~~-------------------~~-~k~~~~ 201 (273)
T PRK13225 142 QLFPGVADLLAQLRSRSLCLGILSSNSRQNIEAFLQRQGLRSLFSVVQAGTP-------------------IL-SKRRAL 201 (273)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChhheEEEEecCC-------------------CC-CCHHHH
Confidence 4789999999999999999999999999999999999999764333322221 01 122333
Q ss_pred HHHHHhc---CCEEEEEcCCccCHHHHhhCCce
Q 044020 525 TQLRNTF---GEVVAVTGDGTNDASALHEADIG 554 (563)
Q Consensus 525 ~~l~~~~---g~~v~~iGDg~ND~~~l~~a~vg 554 (563)
..+.+++ .+.+++|||+.+|+.+-+.||+-
T Consensus 202 ~~~l~~~~~~p~~~l~IGDs~~Di~aA~~AG~~ 234 (273)
T PRK13225 202 SQLVAREGWQPAAVMYVGDETRDVEAARQVGLI 234 (273)
T ss_pred HHHHHHhCcChhHEEEECCCHHHHHHHHHCCCe
Confidence 3333222 46799999999999999999984
|
|
| >PRK13478 phosphonoacetaldehyde hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=97.53 E-value=0.00034 Score=68.44 Aligned_cols=96 Identities=15% Similarity=0.077 Sum_probs=67.0
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCC-CceeechhhhcCCCCCCCcceeEEEecChhhHHHH
Q 044020 445 PVRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAKECGILTSD-GEAVEGPEFRNMSPADIIPKLQVMARSLPSDKHTL 523 (563)
Q Consensus 445 ~~~~~~~~~I~~l~~~gi~v~i~TGd~~~~a~~~a~~lgi~~~~-~~~~~g~~~~~~~~~~~~~~~~v~~~~~p~~K~~~ 523 (563)
.+.|++.++|+.|+++|+++.++|+.....+..+.+.+|+.... ..++.+.+. ......|+--..+
T Consensus 101 ~~~pg~~elL~~L~~~g~~l~I~T~~~~~~~~~~l~~~~l~~~~~d~i~~~~~~-------------~~~KP~p~~~~~a 167 (267)
T PRK13478 101 TPIPGVLEVIAALRARGIKIGSTTGYTREMMDVVVPLAAAQGYRPDHVVTTDDV-------------PAGRPYPWMALKN 167 (267)
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHHhhcCCCceEEEcCCcC-------------CCCCCChHHHHHH
Confidence 46799999999999999999999999999988888888875431 223222211 0112223333334
Q ss_pred HHHHHHhcCCEEEEEcCCccCHHHHhhCCc
Q 044020 524 VTQLRNTFGEVVAVTGDGTNDASALHEADI 553 (563)
Q Consensus 524 v~~l~~~~g~~v~~iGDg~ND~~~l~~a~v 553 (563)
++.+.....+.+++|||+.+|+.+-+.||+
T Consensus 168 ~~~l~~~~~~e~l~IGDs~~Di~aA~~aG~ 197 (267)
T PRK13478 168 AIELGVYDVAACVKVDDTVPGIEEGLNAGM 197 (267)
T ss_pred HHHcCCCCCcceEEEcCcHHHHHHHHHCCC
Confidence 444432112679999999999999999998
|
|
| >TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672 | Back alignment and domain information |
|---|
Probab=97.50 E-value=0.00025 Score=67.21 Aligned_cols=87 Identities=18% Similarity=0.210 Sum_probs=62.7
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCC----CHHHHHHHHHHcCCCCCCCceeechhhhcCCCCCCCcceeEEEecChhhHH
Q 044020 446 VRPGVKEAVQTCLEAGITVRMVTGD----NINTARAIAKECGILTSDGEAVEGPEFRNMSPADIIPKLQVMARSLPSDKH 521 (563)
Q Consensus 446 ~~~~~~~~I~~l~~~gi~v~i~TGd----~~~~a~~~a~~lgi~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~p~~K~ 521 (563)
+.+.+++.++.++++|+++.++|++ ....+..+.+.+|+......++.+.... ...| +|.
T Consensus 115 p~~~a~elL~~l~~~G~~i~iVTnr~~~k~~~~a~~ll~~lGi~~~f~~i~~~d~~~---------------~~Kp-~~~ 178 (237)
T TIGR01672 115 PKEVARQLIDMHQRRGDAIFFVTGRTPGKTDTVSKTLAKNFHIPAMNPVIFAGDKPG---------------QYQY-TKT 178 (237)
T ss_pred chhHHHHHHHHHHHCCCEEEEEeCCCCCcCHHHHHHHHHHhCCchheeEEECCCCCC---------------CCCC-CHH
Confidence 3444999999999999999999999 6778999999999976433333333211 0112 233
Q ss_pred HHHHHHHHhcCCEEEEEcCCccCHHHHhhCCc
Q 044020 522 TLVTQLRNTFGEVVAVTGDGTNDASALHEADI 553 (563)
Q Consensus 522 ~~v~~l~~~~g~~v~~iGDg~ND~~~l~~a~v 553 (563)
. .+++. + .++++||+.||+.+-+.||+
T Consensus 179 ~---~l~~~-~-i~i~vGDs~~DI~aAk~AGi 205 (237)
T TIGR01672 179 Q---WIQDK-N-IRIHYGDSDNDITAAKEAGA 205 (237)
T ss_pred H---HHHhC-C-CeEEEeCCHHHHHHHHHCCC
Confidence 2 33433 4 47899999999999999987
|
Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion. |
| >PRK11009 aphA acid phosphatase/phosphotransferase; Provisional | Back alignment and domain information |
|---|
Probab=97.47 E-value=0.00037 Score=66.01 Aligned_cols=90 Identities=17% Similarity=0.276 Sum_probs=64.2
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCC----HHHHHHHHHHcCC--CCCCCceeechhhhcCCCCCCCcceeEEEecChh
Q 044020 445 PVRPGVKEAVQTCLEAGITVRMVTGDN----INTARAIAKECGI--LTSDGEAVEGPEFRNMSPADIIPKLQVMARSLPS 518 (563)
Q Consensus 445 ~~~~~~~~~I~~l~~~gi~v~i~TGd~----~~~a~~~a~~lgi--~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~p~ 518 (563)
.+.+++++.++.++++|+++.++|+|+ ..++..+.+.+|+ ......++.|.. ....
T Consensus 114 ~p~~Ga~elL~~L~~~G~~I~iVTnR~~~k~~~t~~~Llk~~gip~~~~f~vil~gd~------------------~~K~ 175 (237)
T PRK11009 114 IPKEVARQLIDMHVKRGDSIYFITGRTATKTETVSKTLADDFHIPADNMNPVIFAGDK------------------PGQY 175 (237)
T ss_pred cchHHHHHHHHHHHHCCCeEEEEeCCCCcccHHHHHHHHHHcCCCcccceeEEEcCCC------------------CCCC
Confidence 377889999999999999999999985 5588888888999 432222222221 0113
Q ss_pred hHHHHHHHHHHhcCCEEEEEcCCccCHHHHhhCCc-eEee
Q 044020 519 DKHTLVTQLRNTFGEVVAVTGDGTNDASALHEADI-GLAM 557 (563)
Q Consensus 519 ~K~~~v~~l~~~~g~~v~~iGDg~ND~~~l~~a~v-giam 557 (563)
.|...+ ++. + .++++||..+|+.+-+.||+ +|.+
T Consensus 176 ~K~~~l---~~~-~-i~I~IGDs~~Di~aA~~AGi~~I~v 210 (237)
T PRK11009 176 TKTQWL---KKK-N-IRIFYGDSDNDITAAREAGARGIRI 210 (237)
T ss_pred CHHHHH---Hhc-C-CeEEEcCCHHHHHHHHHcCCcEEEE
Confidence 454433 333 4 48889999999999999998 4433
|
|
| >TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED | Back alignment and domain information |
|---|
Probab=97.46 E-value=0.00037 Score=63.70 Aligned_cols=95 Identities=14% Similarity=0.126 Sum_probs=66.4
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCceeechhhhcCCCCCCCcceeEEEecChhhHHHHH
Q 044020 445 PVRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAKECGILTSDGEAVEGPEFRNMSPADIIPKLQVMARSLPSDKHTLV 524 (563)
Q Consensus 445 ~~~~~~~~~I~~l~~~gi~v~i~TGd~~~~a~~~a~~lgi~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v 524 (563)
++.|++.++++.|+++|++++++|+..... .....++|+......++.+.+. ......|+--..+.
T Consensus 85 ~~~~g~~~~l~~l~~~g~~~~i~Tn~~~~~-~~~~~~~~l~~~f~~i~~~~~~-------------~~~KP~~~~~~~~~ 150 (183)
T TIGR01509 85 KPLPGVEPLLEALRARGKKLALLTNSPRDH-AVLVQELGLRDLFDVVIFSGDV-------------GRGKPDPDIYLLAL 150 (183)
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEeCCchHH-HHHHHhcCCHHHCCEEEEcCCC-------------CCCCCCHHHHHHHH
Confidence 578999999999999999999999988777 6666668886533333332211 11122233333444
Q ss_pred HHHHHhcCCEEEEEcCCccCHHHHhhCCce
Q 044020 525 TQLRNTFGEVVAVTGDGTNDASALHEADIG 554 (563)
Q Consensus 525 ~~l~~~~g~~v~~iGDg~ND~~~l~~a~vg 554 (563)
+.+... ...+++|||...|+.+-+.+|+-
T Consensus 151 ~~~~~~-~~~~~~vgD~~~di~aA~~~G~~ 179 (183)
T TIGR01509 151 KKLGLK-PEECLFVDDSPAGIEAAKAAGMH 179 (183)
T ss_pred HHcCCC-cceEEEEcCCHHHHHHHHHcCCE
Confidence 444444 57899999999999999999983
|
HAD subfamilies caused by an overly broad single model. |
| >PLN02575 haloacid dehalogenase-like hydrolase | Back alignment and domain information |
|---|
Probab=97.46 E-value=0.00036 Score=70.56 Aligned_cols=96 Identities=19% Similarity=0.153 Sum_probs=74.5
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCceeechhhhcCCCCCCCcceeEEEecChhhHHHHH
Q 044020 445 PVRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAKECGILTSDGEAVEGPEFRNMSPADIIPKLQVMARSLPSDKHTLV 524 (563)
Q Consensus 445 ~~~~~~~~~I~~l~~~gi~v~i~TGd~~~~a~~~a~~lgi~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v 524 (563)
.+.+++.+.++.|+++|+++.++|+.+...+..+.+.+|+......++.+.+.. .....|+--...+
T Consensus 216 ~l~pGa~ElL~~Lk~~GiklaIaSn~~~~~~~~~L~~lgL~~yFd~Iv~sddv~-------------~~KP~Peifl~A~ 282 (381)
T PLN02575 216 RLRTGSQEFVNVLMNYKIPMALVSTRPRKTLENAIGSIGIRGFFSVIVAAEDVY-------------RGKPDPEMFIYAA 282 (381)
T ss_pred CcCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCHHHceEEEecCcCC-------------CCCCCHHHHHHHH
Confidence 367999999999999999999999999999999999999976555554444321 1122344444555
Q ss_pred HHHHHhcCCEEEEEcCCccCHHHHhhCCce
Q 044020 525 TQLRNTFGEVVAVTGDGTNDASALHEADIG 554 (563)
Q Consensus 525 ~~l~~~~g~~v~~iGDg~ND~~~l~~a~vg 554 (563)
+.++.. .+.+++|||..+|+.+-+.||+-
T Consensus 283 ~~lgl~-Peecl~IGDS~~DIeAAk~AGm~ 311 (381)
T PLN02575 283 QLLNFI-PERCIVFGNSNQTVEAAHDARMK 311 (381)
T ss_pred HHcCCC-cccEEEEcCCHHHHHHHHHcCCE
Confidence 555544 68899999999999999999983
|
|
| >PRK14988 GMP/IMP nucleotidase; Provisional | Back alignment and domain information |
|---|
Probab=97.45 E-value=0.00027 Score=67.05 Aligned_cols=96 Identities=9% Similarity=0.010 Sum_probs=69.0
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCceeechhhhcCCCCCCCcceeEEEecChhhHHHHH
Q 044020 445 PVRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAKECGILTSDGEAVEGPEFRNMSPADIIPKLQVMARSLPSDKHTLV 524 (563)
Q Consensus 445 ~~~~~~~~~I~~l~~~gi~v~i~TGd~~~~a~~~a~~lgi~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v 524 (563)
.+.|++.+.++.|+++|+++.++|+-+...+....+.+|+......++.+.+.. .....|+--..++
T Consensus 93 ~~~~g~~e~L~~Lk~~g~~~~i~Tn~~~~~~~~~l~~~~l~~~fd~iv~s~~~~-------------~~KP~p~~~~~~~ 159 (224)
T PRK14988 93 VLREDTVPFLEALKASGKRRILLTNAHPHNLAVKLEHTGLDAHLDLLLSTHTFG-------------YPKEDQRLWQAVA 159 (224)
T ss_pred CcCCCHHHHHHHHHhCCCeEEEEeCcCHHHHHHHHHHCCcHHHCCEEEEeeeCC-------------CCCCCHHHHHHHH
Confidence 578999999999999999999999988888888888899865333333332210 0112223223334
Q ss_pred HHHHHhcCCEEEEEcCCccCHHHHhhCCce
Q 044020 525 TQLRNTFGEVVAVTGDGTNDASALHEADIG 554 (563)
Q Consensus 525 ~~l~~~~g~~v~~iGDg~ND~~~l~~a~vg 554 (563)
+.+.-. .+.+++|||+.+|+.+-+.||+.
T Consensus 160 ~~~~~~-p~~~l~igDs~~di~aA~~aG~~ 188 (224)
T PRK14988 160 EHTGLK-AERTLFIDDSEPILDAAAQFGIR 188 (224)
T ss_pred HHcCCC-hHHEEEEcCCHHHHHHHHHcCCe
Confidence 444433 47899999999999999999996
|
|
| >PHA02530 pseT polynucleotide kinase; Provisional | Back alignment and domain information |
|---|
Probab=97.44 E-value=0.00033 Score=69.85 Aligned_cols=109 Identities=13% Similarity=0.007 Sum_probs=76.7
Q ss_pred cccCCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC-CCCceeechhhhcCCCCCCCcceeEEEecChhh
Q 044020 441 GIKDPVRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAKECGILT-SDGEAVEGPEFRNMSPADIIPKLQVMARSLPSD 519 (563)
Q Consensus 441 ~~~d~~~~~~~~~I~~l~~~gi~v~i~TGd~~~~a~~~a~~lgi~~-~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~p~~ 519 (563)
...+++.+++.+++++|++.|++++++||++...+..+.+.+|+.. ....++....... ..+.. .-.+..|+-
T Consensus 183 ~~~~~~~~~~~~~l~~l~~~g~~i~i~T~r~~~~~~~~l~~l~~~~~~f~~i~~~~~~~~-----~~~~~-~~~kp~p~~ 256 (300)
T PHA02530 183 VKEDKPNPMVVELVKMYKAAGYEIIVVSGRDGVCEEDTVEWLRQTDIWFDDLIGRPPDMH-----FQREQ-GDKRPDDVV 256 (300)
T ss_pred cccCCCChhHHHHHHHHHhCCCEEEEEeCCChhhHHHHHHHHHHcCCchhhhhCCcchhh-----hcccC-CCCCCcHHH
Confidence 3567899999999999999999999999999999999999999874 2222211111000 00000 001334556
Q ss_pred HHHHHHHHHHhcCCEEEEEcCCccCHHHHhhCCceE
Q 044020 520 KHTLVTQLRNTFGEVVAVTGDGTNDASALHEADIGL 555 (563)
Q Consensus 520 K~~~v~~l~~~~g~~v~~iGDg~ND~~~l~~a~vgi 555 (563)
+...++.+.......++||||..+|+.+-+.||+-.
T Consensus 257 ~~~~l~~~~~~~~~~~~~vgD~~~d~~~a~~~Gi~~ 292 (300)
T PHA02530 257 KEEIFWEKIAPKYDVLLAVDDRDQVVDMWRRIGLEC 292 (300)
T ss_pred HHHHHHHHhccCceEEEEEcCcHHHHHHHHHhCCeE
Confidence 777776654421478999999999999999999853
|
|
| >PRK11587 putative phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.43 E-value=0.00059 Score=64.52 Aligned_cols=99 Identities=17% Similarity=0.123 Sum_probs=71.0
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCceeechhhhcCCCCCCCcceeEEEecChhhHHHHH
Q 044020 445 PVRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAKECGILTSDGEAVEGPEFRNMSPADIIPKLQVMARSLPSDKHTLV 524 (563)
Q Consensus 445 ~~~~~~~~~I~~l~~~gi~v~i~TGd~~~~a~~~a~~lgi~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v 524 (563)
++.|++.++++.|+++|+++.++|+.+...+....+..|+.. ...++.+.+. -.....|+--...+
T Consensus 83 ~~~pg~~e~L~~L~~~g~~~~ivTn~~~~~~~~~l~~~~l~~-~~~i~~~~~~-------------~~~KP~p~~~~~~~ 148 (218)
T PRK11587 83 TALPGAIALLNHLNKLGIPWAIVTSGSVPVASARHKAAGLPA-PEVFVTAERV-------------KRGKPEPDAYLLGA 148 (218)
T ss_pred eeCcCHHHHHHHHHHcCCcEEEEcCCCchHHHHHHHhcCCCC-ccEEEEHHHh-------------cCCCCCcHHHHHHH
Confidence 478999999999999999999999988777777777888743 2233333321 11123344444555
Q ss_pred HHHHHhcCCEEEEEcCCccCHHHHhhCCc-eEeec
Q 044020 525 TQLRNTFGEVVAVTGDGTNDASALHEADI-GLAMG 558 (563)
Q Consensus 525 ~~l~~~~g~~v~~iGDg~ND~~~l~~a~v-giamg 558 (563)
+.+.-. .+++++|||+.+|+.+-+.||+ .|++.
T Consensus 149 ~~~g~~-p~~~l~igDs~~di~aA~~aG~~~i~v~ 182 (218)
T PRK11587 149 QLLGLA-PQECVVVEDAPAGVLSGLAAGCHVIAVN 182 (218)
T ss_pred HHcCCC-cccEEEEecchhhhHHHHHCCCEEEEEC
Confidence 555544 5889999999999999999998 45553
|
|
| >TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase | Back alignment and domain information |
|---|
Probab=97.41 E-value=0.00029 Score=64.63 Aligned_cols=94 Identities=18% Similarity=0.200 Sum_probs=64.2
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCceeechhhhcCCCCCCCcceeEEEecChhhHHHHH
Q 044020 445 PVRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAKECGILTSDGEAVEGPEFRNMSPADIIPKLQVMARSLPSDKHTLV 524 (563)
Q Consensus 445 ~~~~~~~~~I~~l~~~gi~v~i~TGd~~~~a~~~a~~lgi~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v 524 (563)
++.|++.++++.|+++|+++.++|+. ..+....+.+|+......++.+.+.. .....|+--..++
T Consensus 88 ~~~~g~~~~l~~l~~~g~~i~i~S~~--~~~~~~l~~~~l~~~f~~v~~~~~~~-------------~~kp~~~~~~~~~ 152 (185)
T TIGR02009 88 EVLPGIENFLKRLKKKGIAVGLGSSS--KNADRILAKLGLTDYFDAIVDADEVK-------------EGKPHPETFLLAA 152 (185)
T ss_pred CCCcCHHHHHHHHHHcCCeEEEEeCc--hhHHHHHHHcChHHHCCEeeehhhCC-------------CCCCChHHHHHHH
Confidence 58999999999999999999999997 66788888999865333333222110 0111122112233
Q ss_pred HHHHHhcCCEEEEEcCCccCHHHHhhCCce
Q 044020 525 TQLRNTFGEVVAVTGDGTNDASALHEADIG 554 (563)
Q Consensus 525 ~~l~~~~g~~v~~iGDg~ND~~~l~~a~vg 554 (563)
+.+... .+.+++|||+.+|+.+-+.||+.
T Consensus 153 ~~~~~~-~~~~v~IgD~~~di~aA~~~G~~ 181 (185)
T TIGR02009 153 ELLGVS-PNECVVFEDALAGVQAARAAGMF 181 (185)
T ss_pred HHcCCC-HHHeEEEeCcHhhHHHHHHCCCe
Confidence 333322 36799999999999999999984
|
All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509). |
| >PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A | Back alignment and domain information |
|---|
Probab=97.38 E-value=0.00017 Score=65.16 Aligned_cols=98 Identities=19% Similarity=0.254 Sum_probs=71.7
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCceeechhhhcCCCCCCCcceeEEEecChhhHHHH
Q 044020 444 DPVRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAKECGILTSDGEAVEGPEFRNMSPADIIPKLQVMARSLPSDKHTL 523 (563)
Q Consensus 444 d~~~~~~~~~I~~l~~~gi~v~i~TGd~~~~a~~~a~~lgi~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~p~~K~~~ 523 (563)
.++.+++.+++++|+++|++++++|+.+........+.+|+......++...+.. .....|+--..+
T Consensus 76 ~~~~~~~~~~L~~l~~~~~~~~i~Sn~~~~~~~~~l~~~~~~~~f~~i~~~~~~~-------------~~Kp~~~~~~~~ 142 (176)
T PF13419_consen 76 LQPYPGVRELLERLKAKGIPLVIVSNGSRERIERVLERLGLDDYFDEIISSDDVG-------------SRKPDPDAYRRA 142 (176)
T ss_dssp EEESTTHHHHHHHHHHTTSEEEEEESSEHHHHHHHHHHTTHGGGCSEEEEGGGSS-------------SSTTSHHHHHHH
T ss_pred cchhhhhhhhhhhcccccceeEEeecCCcccccccccccccccccccccccchhh-------------hhhhHHHHHHHH
Confidence 3488999999999999999999999999999999999999875333333332211 011122333445
Q ss_pred HHHHHHhcCCEEEEEcCCccCHHHHhhCCceE
Q 044020 524 VTQLRNTFGEVVAVTGDGTNDASALHEADIGL 555 (563)
Q Consensus 524 v~~l~~~~g~~v~~iGDg~ND~~~l~~a~vgi 555 (563)
++.+.-. ++.+++|||+..|+.+-+.+|+--
T Consensus 143 ~~~~~~~-p~~~~~vgD~~~d~~~A~~~G~~~ 173 (176)
T PF13419_consen 143 LEKLGIP-PEEILFVGDSPSDVEAAKEAGIKT 173 (176)
T ss_dssp HHHHTSS-GGGEEEEESSHHHHHHHHHTTSEE
T ss_pred HHHcCCC-cceEEEEeCCHHHHHHHHHcCCeE
Confidence 5555444 578999999999999999999843
|
... |
| >PLN02940 riboflavin kinase | Back alignment and domain information |
|---|
Probab=97.30 E-value=0.00052 Score=70.52 Aligned_cols=96 Identities=16% Similarity=0.118 Sum_probs=71.2
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHH-HcCCCCCCCceeechhhhcCCCCCCCcceeEEEecChhhHHHH
Q 044020 445 PVRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAK-ECGILTSDGEAVEGPEFRNMSPADIIPKLQVMARSLPSDKHTL 523 (563)
Q Consensus 445 ~~~~~~~~~I~~l~~~gi~v~i~TGd~~~~a~~~a~-~lgi~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~p~~K~~~ 523 (563)
++.|++.+.++.|+++|+++.|+|+.....+....+ ..|+......++.+.+. ......|+--..+
T Consensus 93 ~l~pGv~elL~~Lk~~g~~l~IvTn~~~~~~~~~l~~~~gl~~~Fd~ii~~d~v-------------~~~KP~p~~~~~a 159 (382)
T PLN02940 93 KALPGANRLIKHLKSHGVPMALASNSPRANIEAKISCHQGWKESFSVIVGGDEV-------------EKGKPSPDIFLEA 159 (382)
T ss_pred CCCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhccChHhhCCEEEehhhc-------------CCCCCCHHHHHHH
Confidence 367999999999999999999999999888877766 67886544445444432 1112334444455
Q ss_pred HHHHHHhcCCEEEEEcCCccCHHHHhhCCce
Q 044020 524 VTQLRNTFGEVVAVTGDGTNDASALHEADIG 554 (563)
Q Consensus 524 v~~l~~~~g~~v~~iGDg~ND~~~l~~a~vg 554 (563)
++.+... .+++++|||+.+|+.+-+.||+.
T Consensus 160 ~~~lgv~-p~~~l~VGDs~~Di~aA~~aGi~ 189 (382)
T PLN02940 160 AKRLNVE-PSNCLVIEDSLPGVMAGKAAGME 189 (382)
T ss_pred HHHcCCC-hhHEEEEeCCHHHHHHHHHcCCE
Confidence 5555544 57899999999999999999985
|
|
| >COG4359 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=97.25 E-value=0.00075 Score=59.20 Aligned_cols=106 Identities=19% Similarity=0.198 Sum_probs=73.0
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCC--CCceeechhhhcCCCCCCCcceeEEEe---cChhh
Q 044020 445 PVRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAKECGILTS--DGEAVEGPEFRNMSPADIIPKLQVMAR---SLPSD 519 (563)
Q Consensus 445 ~~~~~~~~~I~~l~~~gi~v~i~TGd~~~~a~~~a~~lgi~~~--~~~~~~g~~~~~~~~~~~~~~~~v~~~---~~p~~ 519 (563)
.++|+-++.++.+++.+++++++|+....-..++.+.++=... ..-++..+..-+.. .+..+... .--.+
T Consensus 73 ~Idp~fKef~e~ike~di~fiVvSsGm~~fI~~lfe~ivgke~i~~idi~sn~~~ih~d-----g~h~i~~~~ds~fG~d 147 (220)
T COG4359 73 KIDPGFKEFVEWIKEHDIPFIVVSSGMDPFIYPLFEGIVGKERIYCIDIVSNNDYIHID-----GQHSIKYTDDSQFGHD 147 (220)
T ss_pred ccCccHHHHHHHHHHcCCCEEEEeCCCchHHHHHHHhhccccceeeeEEeecCceEcCC-----CceeeecCCccccCCC
Confidence 3899999999999999999999999999999888888762110 00011110000000 00011111 11246
Q ss_pred HHHHHHHHHHhcCCEEEEEcCCccCHHHHhhCCceEe
Q 044020 520 KHTLVTQLRNTFGEVVAVTGDGTNDASALHEADIGLA 556 (563)
Q Consensus 520 K~~~v~~l~~~~g~~v~~iGDg~ND~~~l~~a~vgia 556 (563)
|...++.+.+. .+.+.++|||..|+++-+.+|+-.|
T Consensus 148 K~~vI~~l~e~-~e~~fy~GDsvsDlsaaklsDllFA 183 (220)
T COG4359 148 KSSVIHELSEP-NESIFYCGDSVSDLSAAKLSDLLFA 183 (220)
T ss_pred cchhHHHhhcC-CceEEEecCCcccccHhhhhhhHhh
Confidence 99999999998 8899999999999999999887554
|
|
| >TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase | Back alignment and domain information |
|---|
Probab=97.22 E-value=0.00072 Score=63.09 Aligned_cols=95 Identities=17% Similarity=0.153 Sum_probs=63.9
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCceeechhhhcCCCCCCCcceeEEEecChhhHHHHH
Q 044020 445 PVRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAKECGILTSDGEAVEGPEFRNMSPADIIPKLQVMARSLPSDKHTLV 524 (563)
Q Consensus 445 ~~~~~~~~~I~~l~~~gi~v~i~TGd~~~~a~~~a~~lgi~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v 524 (563)
++.|++.++++.|+++|+++.++|+-... +....+.+|+......++...+. -.....|+--..++
T Consensus 105 ~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~-~~~~l~~~~l~~~fd~i~~s~~~-------------~~~KP~~~~~~~~~ 170 (203)
T TIGR02252 105 QVYPDAIKLLKDLRERGLILGVISNFDSR-LRGLLEALGLLEYFDFVVTSYEV-------------GAEKPDPKIFQEAL 170 (203)
T ss_pred eeCcCHHHHHHHHHHCCCEEEEEeCCchh-HHHHHHHCCcHHhcceEEeeccc-------------CCCCCCHHHHHHHH
Confidence 57899999999999999999999986654 57788888886533333222211 00112222223334
Q ss_pred HHHHHhcCCEEEEEcCCc-cCHHHHhhCCce
Q 044020 525 TQLRNTFGEVVAVTGDGT-NDASALHEADIG 554 (563)
Q Consensus 525 ~~l~~~~g~~v~~iGDg~-ND~~~l~~a~vg 554 (563)
+.+... .+++++|||+. +|+.+-+.||+-
T Consensus 171 ~~~~~~-~~~~~~IgD~~~~Di~~A~~aG~~ 200 (203)
T TIGR02252 171 ERAGIS-PEEALHIGDSLRNDYQGARAAGWR 200 (203)
T ss_pred HHcCCC-hhHEEEECCCchHHHHHHHHcCCe
Confidence 444333 47899999997 899999998874
|
Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes. |
| >TIGR01685 MDP-1 magnesium-dependent phosphatase-1 | Back alignment and domain information |
|---|
Probab=97.22 E-value=0.0019 Score=58.19 Aligned_cols=103 Identities=13% Similarity=0.096 Sum_probs=73.2
Q ss_pred eEEEEecccCCCCcchHHHHHHHHhCCCeEEEEcCC-CHHHHHHHHHHcCCC---------CCCCceeechhhhcCCCCC
Q 044020 435 TLIAVVGIKDPVRPGVKEAVQTCLEAGITVRMVTGD-NINTARAIAKECGIL---------TSDGEAVEGPEFRNMSPAD 504 (563)
Q Consensus 435 ~~lG~i~~~d~~~~~~~~~I~~l~~~gi~v~i~TGd-~~~~a~~~a~~lgi~---------~~~~~~~~g~~~~~~~~~~ 504 (563)
.......-+-++.|++.+.++.|+++|+++.++|+. ....+..+.+.+|+. .....+
T Consensus 35 ~~~~~~~~~~~l~pGv~elL~~Lk~~G~~l~I~Sn~~~~~~~~~~L~~~~l~~~~~~~~~~~~Fd~i------------- 101 (174)
T TIGR01685 35 IIIDKSGTEVTLIKEVRDVLQTLKDAGTYLATASWNDVPEWAYEILGTFEITYAGKTVPMHSLFDDR------------- 101 (174)
T ss_pred eEEeCCCCEEEEcccHHHHHHHHHHCCCEEEEEeCCCChHHHHHHHHhCCcCCCCCcccHHHhceee-------------
Confidence 455555566678999999999999999999999987 888999999999986 211111
Q ss_pred CCcceeEEEecChhhH--HHHHHHHHHhc-----CCEEEEEcCCccCHHHHhhCCceEe
Q 044020 505 IIPKLQVMARSLPSDK--HTLVTQLRNTF-----GEVVAVTGDGTNDASALHEADIGLA 556 (563)
Q Consensus 505 ~~~~~~v~~~~~p~~K--~~~v~~l~~~~-----g~~v~~iGDg~ND~~~l~~a~vgia 556 (563)
+.++..+..| ..+.+.+.+.+ .+++++|||...|+.+-++||+-++
T Consensus 102 ------v~~~~~~~~kp~~~i~~~~~~~~~~gl~p~e~l~VgDs~~di~aA~~aGi~~i 154 (174)
T TIGR01685 102 ------IEIYKPNKAKQLEMILQKVNKVDPSVLKPAQILFFDDRTDNVREVWGYGVTSC 154 (174)
T ss_pred ------eeccCCchHHHHHHHHHHhhhcccCCCCHHHeEEEcChhHhHHHHHHhCCEEE
Confidence 1111111112 24455554321 3789999999999999999998543
|
This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues. |
| >TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E | Back alignment and domain information |
|---|
Probab=97.17 E-value=0.00091 Score=59.33 Aligned_cols=90 Identities=17% Similarity=0.182 Sum_probs=60.6
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCceeechhhhcCCCCCCCcceeEEEecChhhHHHHHH
Q 044020 446 VRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAKECGILTSDGEAVEGPEFRNMSPADIIPKLQVMARSLPSDKHTLVT 525 (563)
Q Consensus 446 ~~~~~~~~I~~l~~~gi~v~i~TGd~~~~a~~~a~~lgi~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~ 525 (563)
..+++.+.++.|+++|+++.++|+.....+....+.. +......++...+ +.....|+--..+++
T Consensus 65 ~~~g~~e~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~-l~~~f~~i~~~~~--------------~~~Kp~~~~~~~~~~ 129 (154)
T TIGR01549 65 YIRGAADLLKRLKEAGIKLGIISNGSLRAQKLLLRKH-LGDYFDLILGSDE--------------FGAKPEPEIFLAALE 129 (154)
T ss_pred eccCHHHHHHHHHHCcCeEEEEeCCchHHHHHHHHHH-HHhcCcEEEecCC--------------CCCCcCHHHHHHHHH
Confidence 4478999999999999999999999999998888876 4432222221111 111222333333344
Q ss_pred HHHHhcCCEEEEEcCCccCHHHHhhCC
Q 044020 526 QLRNTFGEVVAVTGDGTNDASALHEAD 552 (563)
Q Consensus 526 ~l~~~~g~~v~~iGDg~ND~~~l~~a~ 552 (563)
.+... . .+++|||+.+|+.+-+.||
T Consensus 130 ~~~~~-~-~~l~iGDs~~Di~aa~~aG 154 (154)
T TIGR01549 130 SLGLP-P-EVLHVGDNLNDIEGARNAG 154 (154)
T ss_pred HcCCC-C-CEEEEeCCHHHHHHHHHcc
Confidence 44333 4 8999999999999988875
|
HAD subfamilies caused by an overly broad single model. |
| >PLN02779 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=97.12 E-value=0.0014 Score=64.61 Aligned_cols=98 Identities=19% Similarity=0.205 Sum_probs=66.5
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCC--ceeechhhhcCCCCCCCcceeEEEecChhhHHH
Q 044020 445 PVRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAKECGILTSDG--EAVEGPEFRNMSPADIIPKLQVMARSLPSDKHT 522 (563)
Q Consensus 445 ~~~~~~~~~I~~l~~~gi~v~i~TGd~~~~a~~~a~~lgi~~~~~--~~~~g~~~~~~~~~~~~~~~~v~~~~~p~~K~~ 522 (563)
++.|++.+.++.|++.|+++.++|+.+......+.+.++...... .++.+.+. -.....|+--..
T Consensus 144 ~l~pGv~elL~~L~~~g~~l~IvTn~~~~~~~~~l~~~~~~~~~~~~~~v~~~~~-------------~~~KP~p~~~~~ 210 (286)
T PLN02779 144 PLRPGVLRLMDEALAAGIKVAVCSTSNEKAVSKIVNTLLGPERAQGLDVFAGDDV-------------PKKKPDPDIYNL 210 (286)
T ss_pred CchhhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhccccccCceEEEecccc-------------CCCCCCHHHHHH
Confidence 478999999999999999999999998888887777664221100 11122110 011222333344
Q ss_pred HHHHHHHhcCCEEEEEcCCccCHHHHhhCCceEe
Q 044020 523 LVTQLRNTFGEVVAVTGDGTNDASALHEADIGLA 556 (563)
Q Consensus 523 ~v~~l~~~~g~~v~~iGDg~ND~~~l~~a~vgia 556 (563)
+++.+... ++.+++|||+.+|+.+-+.||+.+.
T Consensus 211 a~~~~~~~-p~~~l~IGDs~~Di~aA~~aG~~~i 243 (286)
T PLN02779 211 AAETLGVD-PSRCVVVEDSVIGLQAAKAAGMRCI 243 (286)
T ss_pred HHHHhCcC-hHHEEEEeCCHHhHHHHHHcCCEEE
Confidence 55555443 5789999999999999999998544
|
|
| >PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated | Back alignment and domain information |
|---|
Probab=97.11 E-value=0.0014 Score=69.34 Aligned_cols=92 Identities=16% Similarity=0.150 Sum_probs=68.8
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCceeechhhhcCCCCCCCcceeEEEecChhhHHHHH
Q 044020 445 PVRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAKECGILTSDGEAVEGPEFRNMSPADIIPKLQVMARSLPSDKHTLV 524 (563)
Q Consensus 445 ~~~~~~~~~I~~l~~~gi~v~i~TGd~~~~a~~~a~~lgi~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v 524 (563)
++.|++.+.++.|+++|+++.++|+.+...+....+.+|+......++.+.+. .....|+.-...+
T Consensus 330 ~l~pG~~e~L~~Lk~~g~~l~IvS~~~~~~~~~~l~~~~l~~~f~~i~~~d~v--------------~~~~kP~~~~~al 395 (459)
T PRK06698 330 ALYPNVKEIFTYIKENNCSIYIASNGLTEYLRAIVSYYDLDQWVTETFSIEQI--------------NSLNKSDLVKSIL 395 (459)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHCCcHhhcceeEecCCC--------------CCCCCcHHHHHHH
Confidence 58899999999999999999999999999999999999997644444444331 1112233222222
Q ss_pred HHHHHhcCCEEEEEcCCccCHHHHhhCCc
Q 044020 525 TQLRNTFGEVVAVTGDGTNDASALHEADI 553 (563)
Q Consensus 525 ~~l~~~~g~~v~~iGDg~ND~~~l~~a~v 553 (563)
+.+ . .+.+++|||+.+|+.+-+.||+
T Consensus 396 ~~l--~-~~~~v~VGDs~~Di~aAk~AG~ 421 (459)
T PRK06698 396 NKY--D-IKEAAVVGDRLSDINAAKDNGL 421 (459)
T ss_pred Hhc--C-cceEEEEeCCHHHHHHHHHCCC
Confidence 222 1 4689999999999999999998
|
|
| >PRK06769 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=97.08 E-value=0.0015 Score=59.13 Aligned_cols=95 Identities=15% Similarity=-0.041 Sum_probs=59.7
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCCHH--------HHHHHHHHcCCCCCCCcee-echhhhcCCCCCCCcceeEEEecC
Q 044020 446 VRPGVKEAVQTCLEAGITVRMVTGDNIN--------TARAIAKECGILTSDGEAV-EGPEFRNMSPADIIPKLQVMARSL 516 (563)
Q Consensus 446 ~~~~~~~~I~~l~~~gi~v~i~TGd~~~--------~a~~~a~~lgi~~~~~~~~-~g~~~~~~~~~~~~~~~~v~~~~~ 516 (563)
+.|++.+++++|++.|+++.++|+.+.. ......+.+|+........ .+++. -.....
T Consensus 29 ~~pgv~e~L~~Lk~~G~~l~I~Tn~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~-------------~~~KP~ 95 (173)
T PRK06769 29 LFPFTKASLQKLKANHIKIFSFTNQPGIADGIATIADFVQELKGFGFDDIYLCPHKHGDGC-------------ECRKPS 95 (173)
T ss_pred ECCCHHHHHHHHHHCCCEEEEEECCchhcCCcCCHHHHHHHHHhCCcCEEEECcCCCCCCC-------------CCCCCC
Confidence 6899999999999999999999987631 2333455666653000000 00000 001222
Q ss_pred hhhHHHHHHHHHHhcCCEEEEEcCCccCHHHHhhCCce
Q 044020 517 PSDKHTLVTQLRNTFGEVVAVTGDGTNDASALHEADIG 554 (563)
Q Consensus 517 p~~K~~~v~~l~~~~g~~v~~iGDg~ND~~~l~~a~vg 554 (563)
|+--..+++.+... .+.+++|||+.+|+.+-+.||+-
T Consensus 96 p~~~~~~~~~l~~~-p~~~i~IGD~~~Di~aA~~aGi~ 132 (173)
T PRK06769 96 TGMLLQAAEKHGLD-LTQCAVIGDRWTDIVAAAKVNAT 132 (173)
T ss_pred HHHHHHHHHHcCCC-HHHeEEEcCCHHHHHHHHHCCCe
Confidence 33334445544433 47899999999999999999984
|
|
| >TIGR01261 hisB_Nterm histidinol-phosphatase | Back alignment and domain information |
|---|
Probab=97.06 E-value=0.0011 Score=59.09 Aligned_cols=93 Identities=24% Similarity=0.194 Sum_probs=61.6
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCC---------------CHHHHHHHHHHcCCCCCCCceee----chhhhcCCCCCC
Q 044020 445 PVRPGVKEAVQTCLEAGITVRMVTGD---------------NINTARAIAKECGILTSDGEAVE----GPEFRNMSPADI 505 (563)
Q Consensus 445 ~~~~~~~~~I~~l~~~gi~v~i~TGd---------------~~~~a~~~a~~lgi~~~~~~~~~----g~~~~~~~~~~~ 505 (563)
++-+++.++|++|+++|++++++|.- ....+..+.+.+|+. ....++. ..+
T Consensus 29 ~~~pgv~e~L~~L~~~g~~l~IvSN~~g~~~~~~~~~~~~~~~~~~~~~l~~~gl~-fd~ii~~~~~~~~~--------- 98 (161)
T TIGR01261 29 RFEKGVIPALLKLKKAGYKFVMVTNQDGLGTPSFPQADFDGPHNLMLQIFRSQGII-FDDVLICPHFPDDN--------- 98 (161)
T ss_pred eECCCHHHHHHHHHHCCCeEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHCCCc-eeEEEECCCCCCCC---------
Confidence 46789999999999999999999985 244667788888885 1111111 000
Q ss_pred CcceeEEEecChhhHHHHHHHHHHhc---CCEEEEEcCCccCHHHHhhCCceE
Q 044020 506 IPKLQVMARSLPSDKHTLVTQLRNTF---GEVVAVTGDGTNDASALHEADIGL 555 (563)
Q Consensus 506 ~~~~~v~~~~~p~~K~~~v~~l~~~~---g~~v~~iGDg~ND~~~l~~a~vgi 555 (563)
...+ .| +..+++.+.+.+ .+++++|||+.+|+.+-+.+|+..
T Consensus 99 -----~~~~-KP--~~~~~~~~~~~~~~~~~e~l~IGD~~~Di~~A~~aGi~~ 143 (161)
T TIGR01261 99 -----CDCR-KP--KIKLLEPYLKKNLIDKARSYVIGDRETDMQLAENLGIRG 143 (161)
T ss_pred -----CCCC-CC--CHHHHHHHHHHcCCCHHHeEEEeCCHHHHHHHHHCCCeE
Confidence 0000 12 223333333332 367999999999999999999843
|
This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis. |
| >TIGR01675 plant-AP plant acid phosphatase | Back alignment and domain information |
|---|
Probab=97.02 E-value=0.0026 Score=59.61 Aligned_cols=81 Identities=19% Similarity=0.190 Sum_probs=59.1
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCCHHH---HHHHHHHcCCCCCCCceeechhhhcCCCCCCCcceeEEEec-C---
Q 044020 444 DPVRPGVKEAVQTCLEAGITVRMVTGDNINT---ARAIAKECGILTSDGEAVEGPEFRNMSPADIIPKLQVMARS-L--- 516 (563)
Q Consensus 444 d~~~~~~~~~I~~l~~~gi~v~i~TGd~~~~---a~~~a~~lgi~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~-~--- 516 (563)
-+.-|++.++++.|+++|++|+++|||+... +..-.++.|+..... ++-|- .
T Consensus 119 apaip~al~l~~~l~~~G~~Vf~lTGR~e~~r~~T~~nL~~~G~~~~~~---------------------LiLR~~~d~~ 177 (229)
T TIGR01675 119 APALPEGLKLYQKIIELGIKIFLLSGRWEELRNATLDNLINAGFTGWKH---------------------LILRGLEDSN 177 (229)
T ss_pred CCCCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHHcCCCCcCe---------------------eeecCCCCCC
Confidence 4678999999999999999999999999765 566667788764221 22221 0
Q ss_pred ---hhhHHHHHHHHHHhcC-CEEEEEcCCccCHH
Q 044020 517 ---PSDKHTLVTQLRNTFG-EVVAVTGDGTNDAS 546 (563)
Q Consensus 517 ---p~~K~~~v~~l~~~~g-~~v~~iGDg~ND~~ 546 (563)
..-|...-+.+.+. | ..++.+||..+|+.
T Consensus 178 ~~~~~yKs~~R~~l~~~-GYrIv~~iGDq~sDl~ 210 (229)
T TIGR01675 178 KTVVTYKSEVRKSLMEE-GYRIWGNIGDQWSDLL 210 (229)
T ss_pred chHhHHHHHHHHHHHhC-CceEEEEECCChHHhc
Confidence 11266666666666 6 57899999999984
|
This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases. |
| >PLN02580 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=97.00 E-value=0.0028 Score=64.06 Aligned_cols=49 Identities=20% Similarity=0.261 Sum_probs=39.2
Q ss_pred EecCh---hhHHHHHHHHHHhcC---C---EEEEEcCCccCHHHHhh-----CCceEeecCCCC
Q 044020 513 ARSLP---SDKHTLVTQLRNTFG---E---VVAVTGDGTNDASALHE-----ADIGLAMGIAGT 562 (563)
Q Consensus 513 ~~~~p---~~K~~~v~~l~~~~g---~---~v~~iGDg~ND~~~l~~-----a~vgiamg~~~~ 562 (563)
.++.| .+|+..++.+.+++| . .++++||+.||..||+. +++||+|| +|.
T Consensus 292 lEVrP~~g~~KG~Av~~Ll~~~g~~~~d~~~pi~iGDD~TDedmF~~L~~~~~G~~I~Vg-n~~ 354 (384)
T PLN02580 292 LEVRPVIDWNKGKAVEFLLESLGLSNCDDVLPIYIGDDRTDEDAFKVLREGNRGYGILVS-SVP 354 (384)
T ss_pred EEEecCCCCCHHHHHHHHHHhcCCCcccceeEEEECCCchHHHHHHhhhccCCceEEEEe-cCC
Confidence 34555 389999999988765 1 24899999999999996 69999999 653
|
|
| >TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668 | Back alignment and domain information |
|---|
Probab=96.99 E-value=0.0019 Score=58.30 Aligned_cols=84 Identities=21% Similarity=0.258 Sum_probs=61.7
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCC-HHHHHHHHHHcCCCCCCCceeechhhhcCCCCCCCcceeEEEecCh--hhHH
Q 044020 445 PVRPGVKEAVQTCLEAGITVRMVTGDN-INTARAIAKECGILTSDGEAVEGPEFRNMSPADIIPKLQVMARSLP--SDKH 521 (563)
Q Consensus 445 ~~~~~~~~~I~~l~~~gi~v~i~TGd~-~~~a~~~a~~lgi~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~p--~~K~ 521 (563)
.+.+++.++++.|++.|++++++|+.+ ...+..+++.+|+.. .+....| +--.
T Consensus 43 ~~~pgv~e~L~~Lk~~g~~l~I~Sn~~~~~~~~~~~~~~gl~~------------------------~~~~~KP~p~~~~ 98 (170)
T TIGR01668 43 EAYPALRDWIEELKAAGRKLLIVSNNAGEQRAKAVEKALGIPV------------------------LPHAVKPPGCAFR 98 (170)
T ss_pred CcChhHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHcCCEE------------------------EcCCCCCChHHHH
Confidence 578999999999999999999999988 677788888888742 1111222 2222
Q ss_pred HHHHHHHHhcCCEEEEEcCCc-cCHHHHhhCCc
Q 044020 522 TLVTQLRNTFGEVVAVTGDGT-NDASALHEADI 553 (563)
Q Consensus 522 ~~v~~l~~~~g~~v~~iGDg~-ND~~~l~~a~v 553 (563)
.+++.+... .+.+++|||.. .|+.+-+.+|+
T Consensus 99 ~~l~~~~~~-~~~~l~IGDs~~~Di~aA~~aGi 130 (170)
T TIGR01668 99 RAHPEMGLT-SEQVAVVGDRLFTDVMGGNRNGS 130 (170)
T ss_pred HHHHHcCCC-HHHEEEECCcchHHHHHHHHcCC
Confidence 333333322 46799999998 79999999998
|
This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family. |
| >TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254 | Back alignment and domain information |
|---|
Probab=96.98 E-value=0.0018 Score=61.38 Aligned_cols=94 Identities=14% Similarity=0.163 Sum_probs=68.1
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCceeechhhhcCCCCCCCcceeEEEecChhhHHHHH
Q 044020 445 PVRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAKECGILTSDGEAVEGPEFRNMSPADIIPKLQVMARSLPSDKHTLV 524 (563)
Q Consensus 445 ~~~~~~~~~I~~l~~~gi~v~i~TGd~~~~a~~~a~~lgi~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v 524 (563)
++.|++.+++++|++. ++++++|+.....+....+++|+......++...+.. .....|+--...+
T Consensus 97 ~~~~g~~~~L~~l~~~-~~~~i~Sn~~~~~~~~~l~~~~l~~~fd~i~~~~~~~-------------~~KP~~~~~~~~~ 162 (224)
T TIGR02254 97 QLLPGAFELMENLQQK-FRLYIVTNGVRETQYKRLRKSGLFPFFDDIFVSEDAG-------------IQKPDKEIFNYAL 162 (224)
T ss_pred eeCccHHHHHHHHHhc-CcEEEEeCCchHHHHHHHHHCCcHhhcCEEEEcCccC-------------CCCCCHHHHHHHH
Confidence 5789999999999999 9999999999999999999999876433333332210 1112232233444
Q ss_pred HHH-HHhcCCEEEEEcCCc-cCHHHHhhCCc
Q 044020 525 TQL-RNTFGEVVAVTGDGT-NDASALHEADI 553 (563)
Q Consensus 525 ~~l-~~~~g~~v~~iGDg~-ND~~~l~~a~v 553 (563)
+.+ .-. .+++++|||+. +|+.+-+.+|+
T Consensus 163 ~~~~~~~-~~~~v~igD~~~~di~~A~~~G~ 192 (224)
T TIGR02254 163 ERMPKFS-KEEVLMIGDSLTADIKGGQNAGL 192 (224)
T ss_pred HHhcCCC-chheEEECCCcHHHHHHHHHCCC
Confidence 444 333 47899999998 89999999997
|
This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases. |
| >PRK09449 dUMP phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=96.96 E-value=0.0023 Score=60.73 Aligned_cols=96 Identities=16% Similarity=0.103 Sum_probs=66.3
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCceeechhhhcCCCCCCCcceeEEEecChhhHHHHH
Q 044020 445 PVRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAKECGILTSDGEAVEGPEFRNMSPADIIPKLQVMARSLPSDKHTLV 524 (563)
Q Consensus 445 ~~~~~~~~~I~~l~~~gi~v~i~TGd~~~~a~~~a~~lgi~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v 524 (563)
++.|++.++++.|+ +|+++.++|+.....+....+.+|+......++.+.+.. .....|+--..++
T Consensus 95 ~~~~g~~~~L~~L~-~~~~~~i~Tn~~~~~~~~~l~~~~l~~~fd~v~~~~~~~-------------~~KP~p~~~~~~~ 160 (224)
T PRK09449 95 TPLPGAVELLNALR-GKVKMGIITNGFTELQQVRLERTGLRDYFDLLVISEQVG-------------VAKPDVAIFDYAL 160 (224)
T ss_pred ccCccHHHHHHHHH-hCCeEEEEeCCcHHHHHHHHHhCChHHHcCEEEEECccC-------------CCCCCHHHHHHHH
Confidence 37899999999999 689999999998888888899999865333333332210 1112222223344
Q ss_pred HHHHHhcCCEEEEEcCCc-cCHHHHhhCCce
Q 044020 525 TQLRNTFGEVVAVTGDGT-NDASALHEADIG 554 (563)
Q Consensus 525 ~~l~~~~g~~v~~iGDg~-ND~~~l~~a~vg 554 (563)
+.+.....+.+++|||+. +|+.+-+.||+-
T Consensus 161 ~~~~~~~~~~~~~vgD~~~~Di~~A~~aG~~ 191 (224)
T PRK09449 161 EQMGNPDRSRVLMVGDNLHSDILGGINAGID 191 (224)
T ss_pred HHcCCCCcccEEEEcCCcHHHHHHHHHCCCc
Confidence 444321125799999998 799999999984
|
|
| >COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.96 E-value=0.0055 Score=55.54 Aligned_cols=38 Identities=13% Similarity=0.172 Sum_probs=34.9
Q ss_pred chHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC
Q 044020 449 GVKEAVQTCLEAGITVRMVTGDNINTARAIAKECGILT 486 (563)
Q Consensus 449 ~~~~~I~~l~~~gi~v~i~TGd~~~~a~~~a~~lgi~~ 486 (563)
.+...+.+|+++|++|+++|.........+-+.+|+..
T Consensus 27 pA~pv~~el~d~G~~Vi~~SSKT~aE~~~l~~~l~v~~ 64 (274)
T COG3769 27 PAAPVLLELKDAGVPVILCSSKTRAEMLYLQKSLGVQG 64 (274)
T ss_pred ccchHHHHHHHcCCeEEEeccchHHHHHHHHHhcCCCC
Confidence 36678999999999999999999999999999999874
|
|
| >TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain | Back alignment and domain information |
|---|
Probab=96.89 E-value=0.0026 Score=55.96 Aligned_cols=90 Identities=23% Similarity=0.309 Sum_probs=61.3
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCH---------------HHHHHHHHHcCCCCCCCceeechhhhcCCCCCCCcce
Q 044020 445 PVRPGVKEAVQTCLEAGITVRMVTGDNI---------------NTARAIAKECGILTSDGEAVEGPEFRNMSPADIIPKL 509 (563)
Q Consensus 445 ~~~~~~~~~I~~l~~~gi~v~i~TGd~~---------------~~a~~~a~~lgi~~~~~~~~~g~~~~~~~~~~~~~~~ 509 (563)
++.|++.++++.|+++|+++.++|+.+. ..+....+.+|+.... .
T Consensus 27 ~~~~g~~~~l~~Lk~~g~~~~I~Sn~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~--~------------------ 86 (147)
T TIGR01656 27 QLRPGAVPALLTLRAAGYTVVVVTNQSGIGRGYFSAEAFRAPNGRVLELLRQLGVAVDG--V------------------ 86 (147)
T ss_pred EEcCChHHHHHHHHHCCCEEEEEeCCCcccCCcCCHHHHHHHHHHHHHHHHhCCCceeE--E------------------
Confidence 4789999999999999999999998762 4566777888875210 0
Q ss_pred eEEEe------c-ChhhHHHHHHHHHHhcC---CEEEEEcCCccCHHHHhhCCceE
Q 044020 510 QVMAR------S-LPSDKHTLVTQLRNTFG---EVVAVTGDGTNDASALHEADIGL 555 (563)
Q Consensus 510 ~v~~~------~-~p~~K~~~v~~l~~~~g---~~v~~iGDg~ND~~~l~~a~vgi 555 (563)
++.. . ....+.++.+...+.++ +++++|||...|+.+-+.+|+-.
T Consensus 87 -~~~~~~~~~~~~~~KP~~~~~~~~~~~~~~~~~e~i~IGDs~~Di~~A~~~Gi~~ 141 (147)
T TIGR01656 87 -LFCPHHPADNCSCRKPKPGLILEALKRLGVDASRSLVVGDRLRDLQAARNAGLAA 141 (147)
T ss_pred -EECCCCCCCCCCCCCCCHHHHHHHHHHcCCChHHEEEEcCCHHHHHHHHHCCCCE
Confidence 1110 0 01122333333333333 78999999999999999999843
|
This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3. |
| >TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase | Back alignment and domain information |
|---|
Probab=96.86 E-value=0.0047 Score=58.10 Aligned_cols=98 Identities=12% Similarity=0.169 Sum_probs=67.4
Q ss_pred ccCCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHc---CCCCCCCceeechhhhcCCCCCCCcceeEEEecChh
Q 044020 442 IKDPVRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAKEC---GILTSDGEAVEGPEFRNMSPADIIPKLQVMARSLPS 518 (563)
Q Consensus 442 ~~d~~~~~~~~~I~~l~~~gi~v~i~TGd~~~~a~~~a~~l---gi~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~p~ 518 (563)
++-++.+++.+++++|+++|+++.++|..+......+.+.. ++.......++ ..+.....|+
T Consensus 92 ~~~~lypgv~e~L~~Lk~~G~~l~I~Sn~s~~~~~~~~~~~~~~~L~~~f~~~fd---------------~~~g~KP~p~ 156 (220)
T TIGR01691 92 LTSHLYPDVPPALEAWLQLGLRLAVYSSGSVPAQKLLFGHSDAGNLTPYFSGYFD---------------TTVGLKTEAQ 156 (220)
T ss_pred cccCcCcCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHhhccccchhhhcceEEE---------------eCcccCCCHH
Confidence 34568999999999999999999999999888777777665 23221111110 0011122334
Q ss_pred hHHHHHHHHHHhcCCEEEEEcCCccCHHHHhhCCceE
Q 044020 519 DKHTLVTQLRNTFGEVVAVTGDGTNDASALHEADIGL 555 (563)
Q Consensus 519 ~K~~~v~~l~~~~g~~v~~iGDg~ND~~~l~~a~vgi 555 (563)
--..+++.+... .+.++++||...|+.+-+.||+-.
T Consensus 157 ~y~~i~~~lgv~-p~e~lfVgDs~~Di~AA~~AG~~t 192 (220)
T TIGR01691 157 SYVKIAGQLGSP-PREILFLSDIINELDAARKAGLHT 192 (220)
T ss_pred HHHHHHHHhCcC-hhHEEEEeCCHHHHHHHHHcCCEE
Confidence 344555555544 578999999999999999999954
|
This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities. |
| >PLN02423 phosphomannomutase | Back alignment and domain information |
|---|
Probab=96.84 E-value=0.004 Score=59.89 Aligned_cols=38 Identities=26% Similarity=0.346 Sum_probs=31.9
Q ss_pred hHHHHHHHHHHhcCCEEEEEcC----CccCHHHHhh-CCceEeec
Q 044020 519 DKHTLVTQLRNTFGEVVAVTGD----GTNDASALHE-ADIGLAMG 558 (563)
Q Consensus 519 ~K~~~v~~l~~~~g~~v~~iGD----g~ND~~~l~~-a~vgiamg 558 (563)
.|+..++.|+ . .++|+++|| +.||++||+. .-.|+++-
T Consensus 189 nKg~al~~L~-~-~~e~~aFGD~~~~~~ND~eMl~~~~~~~~~~~ 231 (245)
T PLN02423 189 DKTYCLQFLE-D-FDEIHFFGDKTYEGGNDHEIFESERTIGHTVT 231 (245)
T ss_pred CHHHHHHHhc-C-cCeEEEEeccCCCCCCcHHHHhCCCcceEEeC
Confidence 5888888888 5 789999999 8999999997 44588764
|
|
| >PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated | Back alignment and domain information |
|---|
Probab=96.84 E-value=0.0046 Score=56.49 Aligned_cols=99 Identities=18% Similarity=0.102 Sum_probs=59.8
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCH---------------HHHHHHHHHcCCCCCCCceeechhhhcCCCCCCCcce
Q 044020 445 PVRPGVKEAVQTCLEAGITVRMVTGDNI---------------NTARAIAKECGILTSDGEAVEGPEFRNMSPADIIPKL 509 (563)
Q Consensus 445 ~~~~~~~~~I~~l~~~gi~v~i~TGd~~---------------~~a~~~a~~lgi~~~~~~~~~g~~~~~~~~~~~~~~~ 509 (563)
.+.|++.+++++|+++|+++.++|..+. .......+.+|+.- . .++...... ...
T Consensus 29 ~~~pgv~e~L~~Lk~~g~~l~I~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~f-~-~i~~~~~~~--------~~~ 98 (181)
T PRK08942 29 IPIPGSIEAIARLKQAGYRVVVATNQSGIARGLFTEAQLNALHEKMDWSLADRGGRL-D-GIYYCPHHP--------EDG 98 (181)
T ss_pred EECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHcCCcc-c-eEEECCCCC--------CCC
Confidence 3679999999999999999999998762 22233445556521 1 111100000 000
Q ss_pred eEEEecChhhHHHHHHHHHHhcCCEEEEEcCCccCHHHHhhCCce
Q 044020 510 QVMARSLPSDKHTLVTQLRNTFGEVVAVTGDGTNDASALHEADIG 554 (563)
Q Consensus 510 ~v~~~~~p~~K~~~v~~l~~~~g~~v~~iGDg~ND~~~l~~a~vg 554 (563)
.-.....|+--..+++.+... .+++++|||+.+|+.+-+.||+.
T Consensus 99 ~~~~KP~p~~~~~~~~~l~~~-~~~~~~VgDs~~Di~~A~~aG~~ 142 (181)
T PRK08942 99 CDCRKPKPGMLLSIAERLNID-LAGSPMVGDSLRDLQAAAAAGVT 142 (181)
T ss_pred CcCCCCCHHHHHHHHHHcCCC-hhhEEEEeCCHHHHHHHHHCCCe
Confidence 001122333334455555443 57899999999999999999983
|
|
| >PLN02811 hydrolase | Back alignment and domain information |
|---|
Probab=96.81 E-value=0.0035 Score=59.33 Aligned_cols=96 Identities=17% Similarity=0.217 Sum_probs=61.6
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHH-HHHHHcCCCCCCCceeech--hhhcCCCCCCCcceeEEEecChhhHH
Q 044020 445 PVRPGVKEAVQTCLEAGITVRMVTGDNINTAR-AIAKECGILTSDGEAVEGP--EFRNMSPADIIPKLQVMARSLPSDKH 521 (563)
Q Consensus 445 ~~~~~~~~~I~~l~~~gi~v~i~TGd~~~~a~-~~a~~lgi~~~~~~~~~g~--~~~~~~~~~~~~~~~v~~~~~p~~K~ 521 (563)
++.|++.++|+.|+++|+++.++||-...... ...+..++......++.+. +. -.....|+--.
T Consensus 78 ~l~~gv~e~l~~L~~~g~~~~i~S~~~~~~~~~~~~~~~~l~~~f~~i~~~~~~~~-------------~~~KP~p~~~~ 144 (220)
T PLN02811 78 DLMPGAERLVRHLHAKGIPIAIATGSHKRHFDLKTQRHGELFSLMHHVVTGDDPEV-------------KQGKPAPDIFL 144 (220)
T ss_pred CCCccHHHHHHHHHHCCCcEEEEeCCchhhHHHHHcccHHHHhhCCEEEECChhhc-------------cCCCCCcHHHH
Confidence 47899999999999999999999997765333 2333334433222233322 11 01122333334
Q ss_pred HHHHHHH---HhcCCEEEEEcCCccCHHHHhhCCce
Q 044020 522 TLVTQLR---NTFGEVVAVTGDGTNDASALHEADIG 554 (563)
Q Consensus 522 ~~v~~l~---~~~g~~v~~iGDg~ND~~~l~~a~vg 554 (563)
..++.+. .. .+.+++|||+..|+.+-+.||+-
T Consensus 145 ~a~~~~~~~~~~-~~~~v~IgDs~~di~aA~~aG~~ 179 (220)
T PLN02811 145 AAARRFEDGPVD-PGKVLVFEDAPSGVEAAKNAGMS 179 (220)
T ss_pred HHHHHhCCCCCC-ccceEEEeccHhhHHHHHHCCCe
Confidence 4455543 22 47899999999999999999984
|
|
| >TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family | Back alignment and domain information |
|---|
Probab=96.73 E-value=0.0097 Score=57.42 Aligned_cols=87 Identities=15% Similarity=0.181 Sum_probs=60.1
Q ss_pred cCCCCcchHHHHHHHHhCCCeEEEEcCCCHH---HHHHHHHHcCCCCCCCceeechhhhcCCCCCCCcceeEEEecChhh
Q 044020 443 KDPVRPGVKEAVQTCLEAGITVRMVTGDNIN---TARAIAKECGILTSDGEAVEGPEFRNMSPADIIPKLQVMARSLPSD 519 (563)
Q Consensus 443 ~d~~~~~~~~~I~~l~~~gi~v~i~TGd~~~---~a~~~a~~lgi~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~p~~ 519 (563)
..++-|++.+.++.|++.|++++++|+|... .+....++.|+..... -.++.+-....
T Consensus 116 ~a~~ipGA~e~L~~L~~~G~~v~iVTnR~~~~~~~T~~~Lkk~Gi~~~~~-------------------d~lllr~~~~~ 176 (266)
T TIGR01533 116 QAKPVAGALDFLNYANSKGVKIFYVSNRSEKEKAATLKNLKRFGFPQADE-------------------EHLLLKKDKSS 176 (266)
T ss_pred CCCcCccHHHHHHHHHHCCCeEEEEeCCCcchHHHHHHHHHHcCcCCCCc-------------------ceEEeCCCCCC
Confidence 3457899999999999999999999999843 4556777888864110 01333322234
Q ss_pred HHHHHHHHHHhcCCEEEEEcCCccCHHHHh
Q 044020 520 KHTLVTQLRNTFGEVVAVTGDGTNDASALH 549 (563)
Q Consensus 520 K~~~v~~l~~~~g~~v~~iGDg~ND~~~l~ 549 (563)
|..-.+.+.+. -..+++|||..+|.....
T Consensus 177 K~~rr~~I~~~-y~Ivl~vGD~~~Df~~~~ 205 (266)
T TIGR01533 177 KESRRQKVQKD-YEIVLLFGDNLLDFDDFF 205 (266)
T ss_pred cHHHHHHHHhc-CCEEEEECCCHHHhhhhh
Confidence 55555555544 467999999999997643
|
which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles. |
| >TIGR01664 DNA-3'-Pase DNA 3'-phosphatase | Back alignment and domain information |
|---|
Probab=96.73 E-value=0.004 Score=55.90 Aligned_cols=94 Identities=11% Similarity=0.069 Sum_probs=59.7
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCCHH------------HHHHHHHHcCCCCCCCceeechhhhcCCCCCCCcceeEEE
Q 044020 446 VRPGVKEAVQTCLEAGITVRMVTGDNIN------------TARAIAKECGILTSDGEAVEGPEFRNMSPADIIPKLQVMA 513 (563)
Q Consensus 446 ~~~~~~~~I~~l~~~gi~v~i~TGd~~~------------~a~~~a~~lgi~~~~~~~~~g~~~~~~~~~~~~~~~~v~~ 513 (563)
+-|++.+++++|+++|+++.++|..+.. .+..+.+.+|+.. ..++.+... ...
T Consensus 43 ~~pgv~e~L~~Lk~~G~~l~I~TN~~~~~~~~~~~~~~~~~i~~~l~~~gl~~--~~ii~~~~~-------------~~~ 107 (166)
T TIGR01664 43 LYPEIPAKLQELDDEGYKIVIFTNQSGIGRGKLSAESFKNKIEAFLEKLKVPI--QVLAATHAG-------------LYR 107 (166)
T ss_pred ecCCHHHHHHHHHHCCCEEEEEeCCcccccCcccHHHHHHHHHHHHHHcCCCE--EEEEecCCC-------------CCC
Confidence 3589999999999999999999975542 4567888998853 111111100 001
Q ss_pred ecChhhHHHHHHHHH--HhcCCEEEEEcCCc--------cCHHHHhhCCceE
Q 044020 514 RSLPSDKHTLVTQLR--NTFGEVVAVTGDGT--------NDASALHEADIGL 555 (563)
Q Consensus 514 ~~~p~~K~~~v~~l~--~~~g~~v~~iGDg~--------ND~~~l~~a~vgi 555 (563)
...|+--..+++.+. -. .+++++|||.. +|+.+-+.||+-.
T Consensus 108 KP~p~~~~~~~~~~~~~~~-~~~~v~VGD~~~~~~~~~~~Di~aA~~aGi~~ 158 (166)
T TIGR01664 108 KPMTGMWEYLQSQYNSPIK-MTRSFYVGDAAGRKLDFSDADIKFAKNLGLEF 158 (166)
T ss_pred CCccHHHHHHHHHcCCCCC-chhcEEEECCCCCCCCCchhHHHHHHHCCCCc
Confidence 111222223333333 22 36899999986 6999999988754
|
The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region. |
| >TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC | Back alignment and domain information |
|---|
Probab=96.73 E-value=0.0038 Score=53.41 Aligned_cols=88 Identities=9% Similarity=0.055 Sum_probs=58.9
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCC-CHHHHHHHHHHcC-------CCCCCCceeechhhhcCCCCCCCcceeEEEecC
Q 044020 445 PVRPGVKEAVQTCLEAGITVRMVTGD-NINTARAIAKECG-------ILTSDGEAVEGPEFRNMSPADIIPKLQVMARSL 516 (563)
Q Consensus 445 ~~~~~~~~~I~~l~~~gi~v~i~TGd-~~~~a~~~a~~lg-------i~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~ 516 (563)
++.+++.+.++.|+++|+++.++|+. ....+..+.+..+ +......++.+.. ...
T Consensus 29 ~~~~gv~e~L~~Lk~~g~~l~i~Sn~~~~~~~~~~l~~~~~~~~i~~l~~~f~~~~~~~~-----------------~pk 91 (128)
T TIGR01681 29 VTIKEIRDKLQTLKKNGFLLALASYNDDPHVAYELLKIFEDFGIIFPLAEYFDPLTIGYW-----------------LPK 91 (128)
T ss_pred HHHHHHHHHHHHHHHCCeEEEEEeCCCCHHHHHHHHHhccccccchhhHhhhhhhhhcCC-----------------CcH
Confidence 68899999999999999999999999 7877778778777 3221111111100 011
Q ss_pred hhhHHHHHHHHH--HhcCCEEEEEcCCccCHHHHhh
Q 044020 517 PSDKHTLVTQLR--NTFGEVVAVTGDGTNDASALHE 550 (563)
Q Consensus 517 p~~K~~~v~~l~--~~~g~~v~~iGDg~ND~~~l~~ 550 (563)
|+.-..+++.+. -. .+.+++|||...|+..++.
T Consensus 92 p~~~~~a~~~lg~~~~-p~~~l~igDs~~n~~~~~~ 126 (128)
T TIGR01681 92 SPRLVEIALKLNGVLK-PKSILFVDDRPDNNEEVDY 126 (128)
T ss_pred HHHHHHHHHHhcCCCC-cceEEEECCCHhHHHHHHh
Confidence 232234444444 33 4899999999999877653
|
No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC. |
| >PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 [] | Back alignment and domain information |
|---|
Probab=96.67 E-value=0.0079 Score=56.76 Aligned_cols=104 Identities=21% Similarity=0.292 Sum_probs=69.9
Q ss_pred CCCcchHHHHHHH--HhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCceeechhhhcCCCC-CCCcceeEEEecCh--hh
Q 044020 445 PVRPGVKEAVQTC--LEAGITVRMVTGDNINTARAIAKECGILTSDGEAVEGPEFRNMSPA-DIIPKLQVMARSLP--SD 519 (563)
Q Consensus 445 ~~~~~~~~~I~~l--~~~gi~v~i~TGd~~~~a~~~a~~lgi~~~~~~~~~g~~~~~~~~~-~~~~~~~v~~~~~p--~~ 519 (563)
|+.|+.+++++.+ ++.|+.++|+|.-+..-...+.+.-|+......+++.+..-+-... .+.+-..--|..-| .=
T Consensus 71 p~~pgm~~~l~~l~~~~~~~~~~IiSDaNs~fI~~iL~~~gl~~~f~~I~TNpa~~~~~G~l~v~pyh~h~C~~C~~NmC 150 (234)
T PF06888_consen 71 PIDPGMKELLRFLAKNQRGFDLIIISDANSFFIETILEHHGLRDCFSEIFTNPACFDADGRLRVRPYHSHGCSLCPPNMC 150 (234)
T ss_pred CCCccHHHHHHHHHhcCCCceEEEEeCCcHhHHHHHHHhCCCccccceEEeCCceecCCceEEEeCccCCCCCcCCCccc
Confidence 4889999999999 5689999999999999999999999997654444443221111100 00000000122223 24
Q ss_pred HHHHHHHHHHhc---C---CEEEEEcCCccCHHHH
Q 044020 520 KHTLVTQLRNTF---G---EVVAVTGDGTNDASAL 548 (563)
Q Consensus 520 K~~~v~~l~~~~---g---~~v~~iGDg~ND~~~l 548 (563)
|..+++.+.... | ..|++||||.||....
T Consensus 151 K~~il~~~~~~~~~~g~~~~rviYiGDG~nD~Cp~ 185 (234)
T PF06888_consen 151 KGKILERLLQEQAQRGVPYDRVIYIGDGRNDFCPA 185 (234)
T ss_pred hHHHHHHHHHHHhhcCCCcceEEEECCCCCCcCcc
Confidence 888888887651 3 6899999999998654
|
It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity |
| >smart00577 CPDc catalytic domain of ctd-like phosphatases | Back alignment and domain information |
|---|
Probab=96.66 E-value=0.0021 Score=56.64 Aligned_cols=97 Identities=13% Similarity=-0.045 Sum_probs=67.1
Q ss_pred cCCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCC-CCceeechhhhcCCCCCCCcceeEEEecChhhHH
Q 044020 443 KDPVRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAKECGILTS-DGEAVEGPEFRNMSPADIIPKLQVMARSLPSDKH 521 (563)
Q Consensus 443 ~d~~~~~~~~~I~~l~~~gi~v~i~TGd~~~~a~~~a~~lgi~~~-~~~~~~g~~~~~~~~~~~~~~~~v~~~~~p~~K~ 521 (563)
.-.++|++.+.++.|+ .++++.++|+-+...+..+.+.+++... ...++.+.+... ..|. -.
T Consensus 43 ~v~l~pG~~e~L~~L~-~~~~l~I~Ts~~~~~~~~il~~l~~~~~~f~~i~~~~d~~~---------------~KP~-~~ 105 (148)
T smart00577 43 YVKKRPGVDEFLKRAS-ELFELVVFTAGLRMYADPVLDLLDPKKYFGYRRLFRDECVF---------------VKGK-YV 105 (148)
T ss_pred EEEECCCHHHHHHHHH-hccEEEEEeCCcHHHHHHHHHHhCcCCCEeeeEEECccccc---------------cCCe-Ee
Confidence 3357999999999999 5799999999999999999999988532 122333222110 1121 11
Q ss_pred HHHHHHHHhcCCEEEEEcCCccCHHHHhhCCceEee
Q 044020 522 TLVTQLRNTFGEVVAVTGDGTNDASALHEADIGLAM 557 (563)
Q Consensus 522 ~~v~~l~~~~g~~v~~iGDg~ND~~~l~~a~vgiam 557 (563)
+.++.+... .+.+++|||..+|+.+-+.+++-|..
T Consensus 106 k~l~~l~~~-p~~~i~i~Ds~~~~~aa~~ngI~i~~ 140 (148)
T smart00577 106 KDLSLLGRD-LSNVIIIDDSPDSWPFHPENLIPIKP 140 (148)
T ss_pred ecHHHcCCC-hhcEEEEECCHHHhhcCccCEEEecC
Confidence 223333333 57899999999999998888776643
|
|
| >COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.60 E-value=0.0062 Score=52.96 Aligned_cols=85 Identities=19% Similarity=0.261 Sum_probs=65.3
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCceeechhhhcCCCCCCCcceeEEEecChhhH--H
Q 044020 444 DPVRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAKECGILTSDGEAVEGPEFRNMSPADIIPKLQVMARSLPSDK--H 521 (563)
Q Consensus 444 d~~~~~~~~~I~~l~~~gi~v~i~TGd~~~~a~~~a~~lgi~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~p~~K--~ 521 (563)
.+..|+.++.+..++++|++++++|.-++..+..+++.+|++- ++--..|-.+ .
T Consensus 45 ~~~tpe~~~W~~e~k~~gi~v~vvSNn~e~RV~~~~~~l~v~f------------------------i~~A~KP~~~~fr 100 (175)
T COG2179 45 PDATPELRAWLAELKEAGIKVVVVSNNKESRVARAAEKLGVPF------------------------IYRAKKPFGRAFR 100 (175)
T ss_pred CCCCHHHHHHHHHHHhcCCEEEEEeCCCHHHHHhhhhhcCCce------------------------eecccCccHHHHH
Confidence 4478999999999999999999999999999999999999974 4444445433 2
Q ss_pred HHHHHHHHhcCCEEEEEcCC-ccCHHHHhhCCc
Q 044020 522 TLVTQLRNTFGEVVAVTGDG-TNDASALHEADI 553 (563)
Q Consensus 522 ~~v~~l~~~~g~~v~~iGDg-~ND~~~l~~a~v 553 (563)
+.++.++-. .++|+||||. ..|+.+-..+|+
T Consensus 101 ~Al~~m~l~-~~~vvmVGDqL~TDVlggnr~G~ 132 (175)
T COG2179 101 RALKEMNLP-PEEVVMVGDQLFTDVLGGNRAGM 132 (175)
T ss_pred HHHHHcCCC-hhHEEEEcchhhhhhhcccccCc
Confidence 344444433 5899999998 458877666665
|
|
| >PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming] | Back alignment and domain information |
|---|
Probab=96.54 E-value=0.0082 Score=67.69 Aligned_cols=39 Identities=13% Similarity=0.106 Sum_probs=33.4
Q ss_pred CCCCcchHHHHHHH-HhCCCeEEEEcCCCHHHHHHHHHHc
Q 044020 444 DPVRPGVKEAVQTC-LEAGITVRMVTGDNINTARAIAKEC 482 (563)
Q Consensus 444 d~~~~~~~~~I~~l-~~~gi~v~i~TGd~~~~a~~~a~~l 482 (563)
-.+.+++.+++++| ++.|+.|+++|||+..........+
T Consensus 615 ~~p~~~~~~~L~~L~~d~g~~VaIvSGR~~~~L~~~f~~~ 654 (854)
T PLN02205 615 KSPSSKSIDILNTLCRDKNNMVFIVSARSRKTLADWFSPC 654 (854)
T ss_pred CCCCHHHHHHHHHHHhcCCCEEEEEeCCCHHHHHHHhCCC
Confidence 35678999999997 7889999999999999998887543
|
|
| >TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase | Back alignment and domain information |
|---|
Probab=96.50 E-value=0.012 Score=53.60 Aligned_cols=105 Identities=15% Similarity=0.054 Sum_probs=57.4
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCCH---------------HHHHHHHHHcCCCCCCCceeechhhhcCCCCCCCccee
Q 044020 446 VRPGVKEAVQTCLEAGITVRMVTGDNI---------------NTARAIAKECGILTSDGEAVEGPEFRNMSPADIIPKLQ 510 (563)
Q Consensus 446 ~~~~~~~~I~~l~~~gi~v~i~TGd~~---------------~~a~~~a~~lgi~~~~~~~~~g~~~~~~~~~~~~~~~~ 510 (563)
+.|++.++|++|+++|+++.++|.-+. .....+..+.++.- ............. ..+....
T Consensus 27 ~~pgv~e~L~~Lk~~G~~l~i~TN~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~i~~~~~~~~~~---~~~~~~~ 102 (176)
T TIGR00213 27 FIDGVIDALRELKKMGYALVLVTNQSGIARGYFTEAQFEQLTEWMDWSLAERDVDL-DGIYYCPHHPEGV---EEFRQVC 102 (176)
T ss_pred ECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHcCCCc-cEEEECCCCCccc---ccccCCC
Confidence 578999999999999999999998663 12223444444431 0000000000000 0000000
Q ss_pred EEEecChhhHHHHHHHHHHhcCCEEEEEcCCccCHHHHhhCCceE
Q 044020 511 VMARSLPSDKHTLVTQLRNTFGEVVAVTGDGTNDASALHEADIGL 555 (563)
Q Consensus 511 v~~~~~p~~K~~~v~~l~~~~g~~v~~iGDg~ND~~~l~~a~vgi 555 (563)
-.....|+--..+++.+... ...++||||..+|+.+-+.||+..
T Consensus 103 ~~~KP~p~~~~~a~~~~~~~-~~~~v~VGDs~~Di~aA~~aG~~~ 146 (176)
T TIGR00213 103 DCRKPKPGMLLQARKELHID-MAQSYMVGDKLEDMQAGVAAKVKT 146 (176)
T ss_pred CCCCCCHHHHHHHHHHcCcC-hhhEEEEcCCHHHHHHHHHCCCcE
Confidence 00111222223333433333 478999999999999999999853
|
This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812). |
| >TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase | Back alignment and domain information |
|---|
Probab=96.46 E-value=0.003 Score=59.29 Aligned_cols=97 Identities=15% Similarity=0.108 Sum_probs=59.3
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCCHHH--HHHHHHHcCCCCCCCceeechhhhcCCCCCCCcceeEEEecChhhHH
Q 044020 444 DPVRPGVKEAVQTCLEAGITVRMVTGDNINT--ARAIAKECGILTSDGEAVEGPEFRNMSPADIIPKLQVMARSLPSDKH 521 (563)
Q Consensus 444 d~~~~~~~~~I~~l~~~gi~v~i~TGd~~~~--a~~~a~~lgi~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~p~~K~ 521 (563)
-++.|++.++++.|+++|+++.++|...... ........++......++...+. -.....|+--.
T Consensus 93 ~~~~~~~~~~L~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~l~~~fd~v~~s~~~-------------~~~KP~p~~~~ 159 (211)
T TIGR02247 93 TKLRPSMMAAIKTLRAKGFKTACITNNFPTDHSAEEALLPGDIMALFDAVVESCLE-------------GLRKPDPRIYQ 159 (211)
T ss_pred cccChhHHHHHHHHHHCCCeEEEEeCCCCccchhhhHhhhhhhHhhCCEEEEeeec-------------CCCCCCHHHHH
Confidence 3578999999999999999999999865432 33333334443322222211110 00112233223
Q ss_pred HHHHHHHHhcCCEEEEEcCCccCHHHHhhCCce
Q 044020 522 TLVTQLRNTFGEVVAVTGDGTNDASALHEADIG 554 (563)
Q Consensus 522 ~~v~~l~~~~g~~v~~iGDg~ND~~~l~~a~vg 554 (563)
.+++.+... ++.+++|||...|+.+-+.+|+-
T Consensus 160 ~~~~~~g~~-~~~~l~i~D~~~di~aA~~aG~~ 191 (211)
T TIGR02247 160 LMLERLGVA-PEECVFLDDLGSNLKPAAALGIT 191 (211)
T ss_pred HHHHHcCCC-HHHeEEEcCCHHHHHHHHHcCCE
Confidence 444444433 47799999999999999999983
|
These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA. |
| >PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=96.43 E-value=0.0075 Score=55.40 Aligned_cols=92 Identities=15% Similarity=0.123 Sum_probs=65.0
Q ss_pred CcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCceeechhhhcCCCCCCCcceeEEEecChhhHHHHHHH
Q 044020 447 RPGVKEAVQTCLEAGITVRMVTGDNINTARAIAKECGILTSDGEAVEGPEFRNMSPADIIPKLQVMARSLPSDKHTLVTQ 526 (563)
Q Consensus 447 ~~~~~~~I~~l~~~gi~v~i~TGd~~~~a~~~a~~lgi~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~~ 526 (563)
.| ..+.+..|++. +++.++|+.+...+....+.+|+......++...+.. .....|+--..+++.
T Consensus 90 ~~-~~e~L~~L~~~-~~l~I~T~~~~~~~~~~l~~~~l~~~fd~i~~~~~~~-------------~~KP~p~~~~~~~~~ 154 (188)
T PRK10725 90 LP-LIEVVKAWHGR-RPMAVGTGSESAIAEALLAHLGLRRYFDAVVAADDVQ-------------HHKPAPDTFLRCAQL 154 (188)
T ss_pred cc-HHHHHHHHHhC-CCEEEEcCCchHHHHHHHHhCCcHhHceEEEehhhcc-------------CCCCChHHHHHHHHH
Confidence 34 46889999876 8999999999999999999999876444444433311 112233333444444
Q ss_pred HHHhcCCEEEEEcCCccCHHHHhhCCce
Q 044020 527 LRNTFGEVVAVTGDGTNDASALHEADIG 554 (563)
Q Consensus 527 l~~~~g~~v~~iGDg~ND~~~l~~a~vg 554 (563)
++.. ...+++|||..+|+.+-+.||+-
T Consensus 155 ~~~~-~~~~l~igDs~~di~aA~~aG~~ 181 (188)
T PRK10725 155 MGVQ-PTQCVVFEDADFGIQAARAAGMD 181 (188)
T ss_pred cCCC-HHHeEEEeccHhhHHHHHHCCCE
Confidence 4433 46789999999999999999984
|
|
| >TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457 | Back alignment and domain information |
|---|
Probab=96.31 E-value=0.029 Score=54.15 Aligned_cols=50 Identities=12% Similarity=0.074 Sum_probs=42.8
Q ss_pred EEecccCCCCcchHHHHHHHHhCCCeEEEEcC---CCHHHHHHHHHHcCCCCC
Q 044020 438 AVVGIKDPVRPGVKEAVQTCLEAGITVRMVTG---DNINTARAIAKECGILTS 487 (563)
Q Consensus 438 G~i~~~d~~~~~~~~~I~~l~~~gi~v~i~TG---d~~~~a~~~a~~lgi~~~ 487 (563)
|++.-.+.+-+++.++|++|+++|++++++|| |+........+++|+...
T Consensus 10 Gtl~~~~~~i~~a~~~l~~l~~~g~~~~~~Tnn~~r~~~~~~~~l~~~g~~~~ 62 (249)
T TIGR01457 10 GTMYKGKERIPEAETFVHELQKRDIPYLFVTNNSTRTPESVAEMLASFDIPAT 62 (249)
T ss_pred CceEcCCeeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCC
Confidence 55555677778999999999999999999995 889999999999998653
|
This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those. |
| >COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.29 E-value=0.01 Score=56.17 Aligned_cols=98 Identities=17% Similarity=0.173 Sum_probs=82.6
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCceeechhhhcCCCCCCCcceeEEEecChhhHHHH
Q 044020 444 DPVRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAKECGILTSDGEAVEGPEFRNMSPADIIPKLQVMARSLPSDKHTL 523 (563)
Q Consensus 444 d~~~~~~~~~I~~l~~~gi~v~i~TGd~~~~a~~~a~~lgi~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~p~~K~~~ 523 (563)
.++.|++.+.++.|+++|+.+.++|+.+...+..+.+.+|+......++.+.+.. -....|+--...
T Consensus 85 ~~~~pGv~~~l~~L~~~~i~~avaS~s~~~~~~~~L~~~gl~~~f~~~v~~~dv~-------------~~KP~Pd~yL~A 151 (221)
T COG0637 85 LKPIPGVVELLEQLKARGIPLAVASSSPRRAAERVLARLGLLDYFDVIVTADDVA-------------RGKPAPDIYLLA 151 (221)
T ss_pred CCCCccHHHHHHHHHhcCCcEEEecCChHHHHHHHHHHccChhhcchhccHHHHh-------------cCCCCCHHHHHH
Confidence 4688999999999999999999999999999999999999988766666666542 224567777777
Q ss_pred HHHHHHhcCCEEEEEcCCccCHHHHhhCCceE
Q 044020 524 VTQLRNTFGEVVAVTGDGTNDASALHEADIGL 555 (563)
Q Consensus 524 v~~l~~~~g~~v~~iGDg~ND~~~l~~a~vgi 555 (563)
.+.|... +.++++|.|+.+.+.+-++||.-+
T Consensus 152 a~~Lgv~-P~~CvviEDs~~Gi~Aa~aAGm~v 182 (221)
T COG0637 152 AERLGVD-PEECVVVEDSPAGIQAAKAAGMRV 182 (221)
T ss_pred HHHcCCC-hHHeEEEecchhHHHHHHHCCCEE
Confidence 7777655 789999999999999999999844
|
|
| >PRK09456 ?-D-glucose-1-phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=96.26 E-value=0.0085 Score=55.67 Aligned_cols=97 Identities=12% Similarity=0.104 Sum_probs=60.7
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHH-cCCCCCCCceeechhhhcCCCCCCCcceeEEEecChhhHHHH
Q 044020 445 PVRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAKE-CGILTSDGEAVEGPEFRNMSPADIIPKLQVMARSLPSDKHTL 523 (563)
Q Consensus 445 ~~~~~~~~~I~~l~~~gi~v~i~TGd~~~~a~~~a~~-lgi~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~p~~K~~~ 523 (563)
++.|++.++++.|+++|+++.++|.-+.......... .++......++...+.. .....|+--..+
T Consensus 84 ~~~~g~~e~L~~l~~~g~~~~i~Sn~~~~~~~~~~~~~~~l~~~fd~v~~s~~~~-------------~~KP~p~~~~~~ 150 (199)
T PRK09456 84 ALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEVRAAADHIYLSQDLG-------------MRKPEARIYQHV 150 (199)
T ss_pred ccCHHHHHHHHHHHhCCCcEEEEcCCchhhHHHHHhhchhHHHhcCEEEEecccC-------------CCCCCHHHHHHH
Confidence 3689999999999999999999999876654443322 23332111222211110 011222222344
Q ss_pred HHHHHHhcCCEEEEEcCCccCHHHHhhCCceE
Q 044020 524 VTQLRNTFGEVVAVTGDGTNDASALHEADIGL 555 (563)
Q Consensus 524 v~~l~~~~g~~v~~iGDg~ND~~~l~~a~vgi 555 (563)
++.+... .+.+++|||...|+.+-+.+|+..
T Consensus 151 ~~~~~~~-p~~~l~vgD~~~di~aA~~aG~~~ 181 (199)
T PRK09456 151 LQAEGFS-AADAVFFDDNADNIEAANALGITS 181 (199)
T ss_pred HHHcCCC-hhHeEEeCCCHHHHHHHHHcCCEE
Confidence 4444433 478999999999999999999843
|
|
| >PRK10563 6-phosphogluconate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=96.23 E-value=0.0082 Score=56.80 Aligned_cols=95 Identities=11% Similarity=0.117 Sum_probs=66.8
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCC-CceeechhhhcCCCCCCCcceeEEEecChhhHHHH
Q 044020 445 PVRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAKECGILTSD-GEAVEGPEFRNMSPADIIPKLQVMARSLPSDKHTL 523 (563)
Q Consensus 445 ~~~~~~~~~I~~l~~~gi~v~i~TGd~~~~a~~~a~~lgi~~~~-~~~~~g~~~~~~~~~~~~~~~~v~~~~~p~~K~~~ 523 (563)
++.+++.++++.| ++++.++|+.+...+....+.+|+.... ..++.+.+.. .....|+--..+
T Consensus 88 ~~~~gv~~~L~~L---~~~~~ivTn~~~~~~~~~l~~~~l~~~F~~~v~~~~~~~-------------~~KP~p~~~~~a 151 (221)
T PRK10563 88 EPIAGANALLESI---TVPMCVVSNGPVSKMQHSLGKTGMLHYFPDKLFSGYDIQ-------------RWKPDPALMFHA 151 (221)
T ss_pred CcCCCHHHHHHHc---CCCEEEEeCCcHHHHHHHHHhcChHHhCcceEeeHHhcC-------------CCCCChHHHHHH
Confidence 4668999999998 4899999999988899999999987533 2333333211 011223333444
Q ss_pred HHHHHHhcCCEEEEEcCCccCHHHHhhCCceEe
Q 044020 524 VTQLRNTFGEVVAVTGDGTNDASALHEADIGLA 556 (563)
Q Consensus 524 v~~l~~~~g~~v~~iGDg~ND~~~l~~a~vgia 556 (563)
++.+... .+.+++|||+.+|+.+-+.||+.+.
T Consensus 152 ~~~~~~~-p~~~l~igDs~~di~aA~~aG~~~i 183 (221)
T PRK10563 152 AEAMNVN-VENCILVDDSSAGAQSGIAAGMEVF 183 (221)
T ss_pred HHHcCCC-HHHeEEEeCcHhhHHHHHHCCCEEE
Confidence 4444433 4679999999999999999998765
|
|
| >TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase | Back alignment and domain information |
|---|
Probab=96.19 E-value=0.013 Score=53.75 Aligned_cols=98 Identities=10% Similarity=0.024 Sum_probs=67.1
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCceeechhhhcCCCCCCCcceeEEEecChhhHHHHH
Q 044020 445 PVRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAKECGILTSDGEAVEGPEFRNMSPADIIPKLQVMARSLPSDKHTLV 524 (563)
Q Consensus 445 ~~~~~~~~~I~~l~~~gi~v~i~TGd~~~~a~~~a~~lgi~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v 524 (563)
++.+++.+++++|+ .+++++|+.+...+....+.+|+......++...+...- .......|+--..++
T Consensus 84 ~~~~g~~~~L~~L~---~~~~i~Tn~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~---------~~~~KP~p~~~~~~~ 151 (184)
T TIGR01993 84 KPDPELRNLLLRLP---GRKIIFTNGDRAHARRALNRLGIEDCFDGIFCFDTANPD---------YLLPKPSPQAYEKAL 151 (184)
T ss_pred CCCHHHHHHHHhCC---CCEEEEeCCCHHHHHHHHHHcCcHhhhCeEEEeecccCc---------cCCCCCCHHHHHHHH
Confidence 37789999999997 478999999999999999999987543334333321100 000122333334445
Q ss_pred HHHHHhcCCEEEEEcCCccCHHHHhhCCceE
Q 044020 525 TQLRNTFGEVVAVTGDGTNDASALHEADIGL 555 (563)
Q Consensus 525 ~~l~~~~g~~v~~iGDg~ND~~~l~~a~vgi 555 (563)
+.+... ..++++|||...|+.+=+.+|+..
T Consensus 152 ~~~~~~-~~~~l~vgD~~~di~aA~~~G~~~ 181 (184)
T TIGR01993 152 REAGVD-PERAIFFDDSARNIAAAKALGMKT 181 (184)
T ss_pred HHhCCC-ccceEEEeCCHHHHHHHHHcCCEE
Confidence 555444 578999999999999999999854
|
These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509). |
| >TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459 | Back alignment and domain information |
|---|
Probab=96.14 E-value=0.02 Score=54.97 Aligned_cols=93 Identities=17% Similarity=0.220 Sum_probs=61.2
Q ss_pred EEecccCCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHH--HHHHHcCCCC-CCCceeechhhhcCCCCCCCcceeEEEe
Q 044020 438 AVVGIKDPVRPGVKEAVQTCLEAGITVRMVTGDNINTAR--AIAKECGILT-SDGEAVEGPEFRNMSPADIIPKLQVMAR 514 (563)
Q Consensus 438 G~i~~~d~~~~~~~~~I~~l~~~gi~v~i~TGd~~~~a~--~~a~~lgi~~-~~~~~~~g~~~~~~~~~~~~~~~~v~~~ 514 (563)
|.+.-...+-|++.+++++|+++|+++.++|..+..... ...+++|+.. ....++...+.
T Consensus 17 G~l~~~~~~~pga~e~L~~L~~~G~~~~ivTN~~~~~~~~~~~L~~~gl~~~~~~~Ii~s~~~----------------- 79 (242)
T TIGR01459 17 GVIIDGNHTYPGAVQNLNKIIAQGKPVYFVSNSPRNIFSLHKTLKSLGINADLPEMIISSGEI----------------- 79 (242)
T ss_pred cccccCCccCccHHHHHHHHHHCCCEEEEEeCCCCChHHHHHHHHHCCCCccccceEEccHHH-----------------
Confidence 566667788999999999999999999999986655444 6778899864 22222221110
Q ss_pred cChhhHHHHHHHHHHhc---CCEEEEEcCCccCHHHHhhCC
Q 044020 515 SLPSDKHTLVTQLRNTF---GEVVAVTGDGTNDASALHEAD 552 (563)
Q Consensus 515 ~~p~~K~~~v~~l~~~~---g~~v~~iGDg~ND~~~l~~a~ 552 (563)
.. ..++...+++ +..+.++||+..|...+..++
T Consensus 80 ----~~-~~l~~~~~~~~~~~~~~~~vGd~~~d~~~~~~~~ 115 (242)
T TIGR01459 80 ----AV-QMILESKKRFDIRNGIIYLLGHLENDIINLMQCY 115 (242)
T ss_pred ----HH-HHHHhhhhhccCCCceEEEeCCcccchhhhcCCC
Confidence 01 2222222221 467899999888888775544
|
This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily) |
| >KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.05 E-value=0.014 Score=53.07 Aligned_cols=139 Identities=20% Similarity=0.304 Sum_probs=86.5
Q ss_pred HHHHHHHHHHHHHHHhHhHh--hhhccCCCCCCCCCCCCCceEEEEecccCCCCcchHHHHHHHHhCCC-eEEEEcCCCH
Q 044020 396 RNITDVINGFASEALRTLCL--AFKDLNDSSNENNIPDSGYTLIAVVGIKDPVRPGVKEAVQTCLEAGI-TVRMVTGDNI 472 (563)
Q Consensus 396 ~~i~~~~~~~~~~G~r~i~~--a~~~l~~~~~~~~~~~~~~~~lG~i~~~d~~~~~~~~~I~~l~~~gi-~v~i~TGd~~ 472 (563)
+.....++.|+++|.+.--+ .+|.+ |+.|+..++|+.+++.|- .++|+|--+.
T Consensus 57 e~M~rv~k~Lheqgv~~~~ik~~~r~i------------------------P~~Pgmv~lik~~ak~g~~eliIVSDaNs 112 (256)
T KOG3120|consen 57 ELMDRVFKELHEQGVRIAEIKQVLRSI------------------------PIVPGMVRLIKSAAKLGCFELIIVSDANS 112 (256)
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHhcC------------------------CCCccHHHHHHHHHhCCCceEEEEecCch
Confidence 45567778888888765433 22322 488999999999999996 9999999999
Q ss_pred HHHHHHHHHcCCCCCCCceeechhhhcCCCCCCCccee--EEEecChhh--HHHHHHHHHHhc---C---CEEEEEcCCc
Q 044020 473 NTARAIAKECGILTSDGEAVEGPEFRNMSPADIIPKLQ--VMARSLPSD--KHTLVTQLRNTF---G---EVVAVTGDGT 542 (563)
Q Consensus 473 ~~a~~~a~~lgi~~~~~~~~~g~~~~~~~~~~~~~~~~--v~~~~~p~~--K~~~v~~l~~~~---g---~~v~~iGDg~ 542 (563)
.....+.+..|+..-...+++.+..-+-...-.+.... --|...|.. |..++..++... | +++.++|||.
T Consensus 113 fFIe~~Lea~~~~d~F~~IfTNPa~~da~G~L~v~pyH~~hsC~~CPsNmCKg~Vl~~~~~s~~~~gv~yer~iYvGDG~ 192 (256)
T KOG3120|consen 113 FFIEEILEAAGIHDLFSEIFTNPACVDASGRLLVRPYHTQHSCNLCPSNMCKGLVLDELVASQLKDGVRYERLIYVGDGA 192 (256)
T ss_pred hHHHHHHHHccHHHHHHHHhcCCcccCCCCcEEeecCCCCCccCcCchhhhhhHHHHHHHHHHhhcCCceeeEEEEcCCC
Confidence 99999999999854222222221111110000000000 112233443 777776666541 1 3899999999
Q ss_pred cCH-HHHhhCCceEeec
Q 044020 543 NDA-SALHEADIGLAMG 558 (563)
Q Consensus 543 ND~-~~l~~a~vgiamg 558 (563)
||. |+++...--+||-
T Consensus 193 nD~CP~l~Lr~~D~amp 209 (256)
T KOG3120|consen 193 NDFCPVLRLRACDVAMP 209 (256)
T ss_pred CCcCcchhcccCceecc
Confidence 996 4666666656664
|
|
| >PLN02919 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=95.96 E-value=0.019 Score=66.84 Aligned_cols=94 Identities=17% Similarity=0.175 Sum_probs=69.9
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCC-CCCCceeechhhhcCCCCCCCcceeEEEecChhhHHHHH
Q 044020 446 VRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAKECGIL-TSDGEAVEGPEFRNMSPADIIPKLQVMARSLPSDKHTLV 524 (563)
Q Consensus 446 ~~~~~~~~I~~l~~~gi~v~i~TGd~~~~a~~~a~~lgi~-~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v 524 (563)
+.|++.+.++.|+++|+++.++|+.....+....+.+|+. .....++.+.+. -.....|+--...+
T Consensus 162 ~~pG~~elL~~Lk~~G~~l~IvSn~~~~~~~~~L~~~gl~~~~Fd~iv~~~~~-------------~~~KP~Pe~~~~a~ 228 (1057)
T PLN02919 162 GFPGALELITQCKNKGLKVAVASSADRIKVDANLAAAGLPLSMFDAIVSADAF-------------ENLKPAPDIFLAAA 228 (1057)
T ss_pred cCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHcCCChhHCCEEEECccc-------------ccCCCCHHHHHHHH
Confidence 5799999999999999999999999999999999999985 323333333321 11122333334455
Q ss_pred HHHHHhcCCEEEEEcCCccCHHHHhhCCc
Q 044020 525 TQLRNTFGEVVAVTGDGTNDASALHEADI 553 (563)
Q Consensus 525 ~~l~~~~g~~v~~iGDg~ND~~~l~~a~v 553 (563)
+.+... .+.+++|||..+|+.+-+.||+
T Consensus 229 ~~lgv~-p~e~v~IgDs~~Di~AA~~aGm 256 (1057)
T PLN02919 229 KILGVP-TSECVVIEDALAGVQAARAAGM 256 (1057)
T ss_pred HHcCcC-cccEEEEcCCHHHHHHHHHcCC
Confidence 555544 5789999999999999999998
|
|
| >PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A | Back alignment and domain information |
|---|
Probab=95.96 E-value=0.015 Score=47.40 Aligned_cols=90 Identities=23% Similarity=0.275 Sum_probs=56.2
Q ss_pred EEecccCCCCcchHHHHHHHHhCCCeEEEEcCCCHHH---HHHHHHHcCCCCCCCceeechhhhcCCCCCCCcceeEEEe
Q 044020 438 AVVGIKDPVRPGVKEAVQTCLEAGITVRMVTGDNINT---ARAIAKECGILTSDGEAVEGPEFRNMSPADIIPKLQVMAR 514 (563)
Q Consensus 438 G~i~~~d~~~~~~~~~I~~l~~~gi~v~i~TGd~~~~---a~~~a~~lgi~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~ 514 (563)
|++...+++-|++.++|+.|+++|++++++|..+..+ .....+.+|+...... ++.
T Consensus 7 Gvl~~g~~~ipga~e~l~~L~~~g~~~~~lTNns~~s~~~~~~~L~~~Gi~~~~~~--------------------i~t- 65 (101)
T PF13344_consen 7 GVLYNGNEPIPGAVEALDALRERGKPVVFLTNNSSRSREEYAKKLKKLGIPVDEDE--------------------IIT- 65 (101)
T ss_dssp TTSEETTEE-TTHHHHHHHHHHTTSEEEEEES-SSS-HHHHHHHHHHTTTT--GGG--------------------EEE-
T ss_pred cEeEeCCCcCcCHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHHhcCcCCCcCE--------------------EEC-
Confidence 5556678889999999999999999999999876444 3444477887642211 221
Q ss_pred cChhhHHHHHHHHHH-hcCCEEEEEcCCccCHHHHhhCCc
Q 044020 515 SLPSDKHTLVTQLRN-TFGEVVAVTGDGTNDASALHEADI 553 (563)
Q Consensus 515 ~~p~~K~~~v~~l~~-~~g~~v~~iGDg~ND~~~l~~a~v 553 (563)
|. ....+++++ ..+..|.++|.. .....++.+|+
T Consensus 66 --s~--~~~~~~l~~~~~~~~v~vlG~~-~l~~~l~~~G~ 100 (101)
T PF13344_consen 66 --SG--MAAAEYLKEHKGGKKVYVLGSD-GLREELREAGF 100 (101)
T ss_dssp --HH--HHHHHHHHHHTTSSEEEEES-H-HHHHHHHHTTE
T ss_pred --hH--HHHHHHHHhcCCCCEEEEEcCH-HHHHHHHHcCC
Confidence 11 123444544 236889999976 55666666654
|
... |
| >TIGR01686 FkbH FkbH-like domain | Back alignment and domain information |
|---|
Probab=95.92 E-value=0.022 Score=57.23 Aligned_cols=89 Identities=8% Similarity=0.076 Sum_probs=66.9
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHH----cCCCCCCCceeechhhhcCCCCCCCcceeEEEecChhhH
Q 044020 445 PVRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAKE----CGILTSDGEAVEGPEFRNMSPADIIPKLQVMARSLPSDK 520 (563)
Q Consensus 445 ~~~~~~~~~I~~l~~~gi~v~i~TGd~~~~a~~~a~~----lgi~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~p~~K 520 (563)
++.+++.++|+.|+++|+++.++|.-+...+..+.+. +++.... ......+..|
T Consensus 31 ~~~~~~~e~L~~L~~~Gi~lai~S~n~~~~a~~~l~~~~~~~~~~~~f----------------------~~~~~~~~pk 88 (320)
T TIGR01686 31 PLHKTLQEKIKTLKKQGFLLALASKNDEDDAKKVFERRKDFILQAEDF----------------------DARSINWGPK 88 (320)
T ss_pred ccHHHHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHhCccccCcHHHe----------------------eEEEEecCch
Confidence 3578999999999999999999999999999999998 7765311 1111223445
Q ss_pred HHHHHHHHHhcC---CEEEEEcCCccCHHHHhhCCceE
Q 044020 521 HTLVTQLRNTFG---EVVAVTGDGTNDASALHEADIGL 555 (563)
Q Consensus 521 ~~~v~~l~~~~g---~~v~~iGDg~ND~~~l~~a~vgi 555 (563)
...++...+.+| +.+++|||...|+.+.+.+...+
T Consensus 89 ~~~i~~~~~~l~i~~~~~vfidD~~~d~~~~~~~lp~~ 126 (320)
T TIGR01686 89 SESLRKIAKKLNLGTDSFLFIDDNPAERANVKITLPVK 126 (320)
T ss_pred HHHHHHHHHHhCCCcCcEEEECCCHHHHHHHHHHCCCC
Confidence 555555444433 79999999999999999877654
|
The C-terminal portion of this domain is unique to this family (by BLAST). |
| >PRK10444 UMP phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=95.91 E-value=0.026 Score=54.30 Aligned_cols=48 Identities=21% Similarity=0.356 Sum_probs=41.2
Q ss_pred EEecccCCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHH---cCCC
Q 044020 438 AVVGIKDPVRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAKE---CGIL 485 (563)
Q Consensus 438 G~i~~~d~~~~~~~~~I~~l~~~gi~v~i~TGd~~~~a~~~a~~---lgi~ 485 (563)
|++.-.+.+-|++.++|++|+++|++++++|+++..+...++++ +|+.
T Consensus 10 GtL~~~~~~~p~a~~~l~~L~~~g~~~~~~Tn~~~~~~~~~~~~l~~~G~~ 60 (248)
T PRK10444 10 GVLMHDNVAVPGAAEFLHRILDKGLPLVLLTNYPSQTGQDLANRFATAGVD 60 (248)
T ss_pred CceEeCCeeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCC
Confidence 66767788999999999999999999999999998877777666 5764
|
|
| >PLN03017 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=95.91 E-value=0.044 Score=55.07 Aligned_cols=48 Identities=21% Similarity=0.212 Sum_probs=36.7
Q ss_pred CCceEEEEecccC--CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHH
Q 044020 432 SGYTLIAVVGIKD--PVRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAK 480 (563)
Q Consensus 432 ~~~~~lG~i~~~d--~~~~~~~~~I~~l~~~gi~v~i~TGd~~~~a~~~a~ 480 (563)
-|.+++-+..-.+ .+.+++.++|++|. +|++|+++|||+...+..+..
T Consensus 118 ~DGTL~Piv~~p~~a~i~~~~~~aL~~La-~~~~vaIvSGR~~~~l~~~~~ 167 (366)
T PLN03017 118 YDGTLSPIVDDPDKAFMSSKMRRTVKKLA-KCFPTAIVTGRCIDKVYNFVK 167 (366)
T ss_pred cCCcCcCCcCCcccccCCHHHHHHHHHHh-cCCcEEEEeCCCHHHHHHhhc
Confidence 3444444443333 48899999999999 789999999999999988843
|
|
| >PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=95.83 E-value=0.02 Score=57.68 Aligned_cols=98 Identities=24% Similarity=0.164 Sum_probs=61.3
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCC---------------CHHHHHHHHHHcCCCCCCCceeechhhhcCCCCCCCcc
Q 044020 444 DPVRPGVKEAVQTCLEAGITVRMVTGD---------------NINTARAIAKECGILTSDGEAVEGPEFRNMSPADIIPK 508 (563)
Q Consensus 444 d~~~~~~~~~I~~l~~~gi~v~i~TGd---------------~~~~a~~~a~~lgi~~~~~~~~~g~~~~~~~~~~~~~~ 508 (563)
-++.|++.++++.|+++|++++|+|+- ....+..+.+.+|+.- ....+......+
T Consensus 29 ~~l~pGV~e~L~~Lk~~G~kL~IvTNq~g~G~~~~~~~~l~~~~~~i~~iL~~~gl~f-d~i~i~~~~~sd--------- 98 (354)
T PRK05446 29 LAFEPGVIPALLKLQKAGYKLVMVTNQDGLGTDSFPQEDFDPPHNLMMQIFESQGIKF-DEVLICPHFPED--------- 98 (354)
T ss_pred ceECcCHHHHHHHHHhCCCeEEEEECCccccCccccHHHHhhHHHHHHHHHHHcCCce-eeEEEeCCcCcc---------
Confidence 458899999999999999999999983 2345666777887741 111111000000
Q ss_pred eeEEEecChhhHHHHHHHHHHhc---CCEEEEEcCCccCHHHHhhCCceE
Q 044020 509 LQVMARSLPSDKHTLVTQLRNTF---GEVVAVTGDGTNDASALHEADIGL 555 (563)
Q Consensus 509 ~~v~~~~~p~~K~~~v~~l~~~~---g~~v~~iGDg~ND~~~l~~a~vgi 555 (563)
...++ .| +..++..+.+.+ ...++||||+.+|+.+-+.+|+-.
T Consensus 99 -~~~~r-KP--~p~~l~~a~~~l~v~~~~svmIGDs~sDi~aAk~aGi~~ 144 (354)
T PRK05446 99 -NCSCR-KP--KTGLVEEYLAEGAIDLANSYVIGDRETDVQLAENMGIKG 144 (354)
T ss_pred -cCCCC-CC--CHHHHHHHHHHcCCCcccEEEEcCCHHHHHHHHHCCCeE
Confidence 00011 11 223333333332 378999999999999999999853
|
|
| >PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins [] | Back alignment and domain information |
|---|
Probab=95.66 E-value=0.087 Score=46.18 Aligned_cols=102 Identities=21% Similarity=0.315 Sum_probs=70.3
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCCHH---HHHHHHHHc-----CCCCCCCceeech-h-hhcCCCCCCCcceeEEE
Q 044020 444 DPVRPGVKEAVQTCLEAGITVRMVTGDNIN---TARAIAKEC-----GILTSDGEAVEGP-E-FRNMSPADIIPKLQVMA 513 (563)
Q Consensus 444 d~~~~~~~~~I~~l~~~gi~v~i~TGd~~~---~a~~~a~~l-----gi~~~~~~~~~g~-~-~~~~~~~~~~~~~~v~~ 513 (563)
|..++++.+..+++++.|++++-+|+|+.. .++....+. ++.. ..++... . +..+ .+ .+..
T Consensus 26 d~~h~g~~~l~~~i~~~GY~ilYlTaRp~~qa~~Tr~~L~~~~q~~~~lP~--Gpv~~sP~~l~~al------~r-Evi~ 96 (157)
T PF08235_consen 26 DWTHPGAAELYRKIADNGYKILYLTARPIGQANRTRSWLAQHQQQGHNLPD--GPVLLSPDSLFSAL------HR-EVIS 96 (157)
T ss_pred hhhhhcHHHHHHHHHHCCeEEEEECcCcHHHHHHHHHHHHHHHhCCccCCC--CCEEECCcchhhhh------hc-cccc
Confidence 589999999999999999999999999954 445555555 4432 2221111 0 0000 00 1333
Q ss_pred ecChhhHHHHHHHHHHhc----CCEEEEEcCCccCHHHHhhCCce
Q 044020 514 RSLPSDKHTLVTQLRNTF----GEVVAVTGDGTNDASALHEADIG 554 (563)
Q Consensus 514 ~~~p~~K~~~v~~l~~~~----g~~v~~iGDg~ND~~~l~~a~vg 554 (563)
+-..+.|...++.++..| ....+++|+..+|+.+.+++|+-
T Consensus 97 ~~p~~fK~~~L~~l~~~f~~~~~pf~agfGN~~tDv~aY~~vGip 141 (157)
T PF08235_consen 97 KDPEEFKIACLRDLRALFPPDGNPFYAGFGNRSTDVIAYKAVGIP 141 (157)
T ss_pred cChHHHHHHHHHHHHHhcCCCCCeEEEecCCcHHHHHHHHHcCCC
Confidence 333457999999998763 36788999999999999998874
|
SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance []. |
| >COG4030 Uncharacterized protein conserved in archaea [Function unknown] | Back alignment and domain information |
|---|
Probab=95.48 E-value=0.03 Score=51.04 Aligned_cols=117 Identities=23% Similarity=0.317 Sum_probs=66.8
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCc---------eeechh----hhcCC------CCCC
Q 044020 445 PVRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAKECGILTSDGE---------AVEGPE----FRNMS------PADI 505 (563)
Q Consensus 445 ~~~~~~~~~I~~l~~~gi~v~i~TGd~~~~a~~~a~~lgi~~~~~~---------~~~g~~----~~~~~------~~~~ 505 (563)
++-|++.++++.|++. ...+++|-.-.+-+.++|..+|+...+.. .+...+ +..+. .+.+
T Consensus 83 ~lvPgA~etm~~l~~~-~tp~v~STSY~qy~~r~a~~ig~Prg~~~~Te~~lD~~~~PeeeR~E~L~~~~~~~~~~geel 161 (315)
T COG4030 83 KLVPGAEETMATLQER-WTPVVISTSYTQYLRRTASMIGVPRGELHGTEVDLDSIAVPEEEREELLSIIDVIASLSGEEL 161 (315)
T ss_pred ccCCChHHHHHHHhcc-CCceEEeccHHHHHHHHHHhcCCCccccccccccCccccCChHHHHHHHHhcCccccccHHHH
Confidence 4789999999999998 44444454456677899999998542211 110000 00000 0011
Q ss_pred Ccce-eEEEecChhhHHHH---------------HHHHHHhc--CCEEEEEcCCccCHHHHhhCC-ce-EeecCCCC
Q 044020 506 IPKL-QVMARSLPSDKHTL---------------VTQLRNTF--GEVVAVTGDGTNDASALHEAD-IG-LAMGIAGT 562 (563)
Q Consensus 506 ~~~~-~v~~~~~p~~K~~~---------------v~~l~~~~--g~~v~~iGDg~ND~~~l~~a~-vg-iamg~~~~ 562 (563)
+.+. .+|.+..|..-.++ ++.+.+.- ....+++||+..|+.||+.+. -| +|++-||.
T Consensus 162 fe~lDe~F~rLip~E~gki~~~vk~VGgg~ka~i~e~~~ele~~d~sa~~VGDSItDv~ml~~~rgrGglAvaFNGN 238 (315)
T COG4030 162 FEKLDELFSRLIPSEVGKIVESVKAVGGGEKAKIMEGYCELEGIDFSAVVVGDSITDVKMLEAARGRGGLAVAFNGN 238 (315)
T ss_pred HHHHHHHHhhcCHHHHHHHHHhhhhccCcchhHHHHHHHhhcCCCcceeEecCcccchHHHHHhhccCceEEEecCC
Confidence 1111 25666666554444 44443321 136799999999999999873 23 55544554
|
|
| >PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25) | Back alignment and domain information |
|---|
Probab=95.41 E-value=0.03 Score=53.07 Aligned_cols=89 Identities=21% Similarity=0.252 Sum_probs=59.5
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHH---HHHHHHHHcCCCCCCCceeechhhhcCCCCCCCcceeEEEecChhhHH
Q 044020 445 PVRPGVKEAVQTCLEAGITVRMVTGDNIN---TARAIAKECGILTSDGEAVEGPEFRNMSPADIIPKLQVMARSLPSDKH 521 (563)
Q Consensus 445 ~~~~~~~~~I~~l~~~gi~v~i~TGd~~~---~a~~~a~~lgi~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~p~~K~ 521 (563)
+.-|++.+.++.++++|++|+++|||+.. .+..-.++.|+......++.+..-.. .......|.
T Consensus 115 ~aip~a~~l~~~~~~~G~~V~~iT~R~~~~r~~T~~nL~~~G~~~~~~l~lr~~~~~~-------------~~~~~~yK~ 181 (229)
T PF03767_consen 115 PAIPGALELYNYARSRGVKVFFITGRPESQREATEKNLKKAGFPGWDHLILRPDKDPS-------------KKSAVEYKS 181 (229)
T ss_dssp EEETTHHHHHHHHHHTTEEEEEEEEEETTCHHHHHHHHHHHTTSTBSCGEEEEESSTS-------------S------SH
T ss_pred cccHHHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHHcCCCccchhccccccccc-------------cccccccch
Confidence 45678999999999999999999999754 55666778887642322222211000 000123477
Q ss_pred HHHHHHHHhcC-CEEEEEcCCccCHHH
Q 044020 522 TLVTQLRNTFG-EVVAVTGDGTNDASA 547 (563)
Q Consensus 522 ~~v~~l~~~~g-~~v~~iGDg~ND~~~ 547 (563)
..-+.+.+. | +.++.+||..+|..-
T Consensus 182 ~~r~~i~~~-Gy~Ii~~iGD~~~D~~~ 207 (229)
T PF03767_consen 182 ERRKEIEKK-GYRIIANIGDQLSDFSG 207 (229)
T ss_dssp HHHHHHHHT-TEEEEEEEESSGGGCHC
T ss_pred HHHHHHHHc-CCcEEEEeCCCHHHhhc
Confidence 777777776 6 578999999999876
|
The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A .... |
| >PLN02645 phosphoglycolate phosphatase | Back alignment and domain information |
|---|
Probab=95.26 E-value=0.05 Score=54.41 Aligned_cols=49 Identities=18% Similarity=0.247 Sum_probs=40.4
Q ss_pred EEecccCCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHH---HHcCCCC
Q 044020 438 AVVGIKDPVRPGVKEAVQTCLEAGITVRMVTGDNINTARAIA---KECGILT 486 (563)
Q Consensus 438 G~i~~~d~~~~~~~~~I~~l~~~gi~v~i~TGd~~~~a~~~a---~~lgi~~ 486 (563)
|++.-.+.+-+++.++|++|+++|++++++|+++..+...++ +++|+..
T Consensus 37 Gtl~~~~~~~~ga~e~l~~lr~~g~~~~~~TN~~~~~~~~~~~~l~~lGi~~ 88 (311)
T PLN02645 37 GVIWKGDKLIEGVPETLDMLRSMGKKLVFVTNNSTKSRAQYGKKFESLGLNV 88 (311)
T ss_pred CCeEeCCccCcCHHHHHHHHHHCCCEEEEEeCCCCCCHHHHHHHHHHCCCCC
Confidence 666666778899999999999999999999999966665555 6678753
|
|
| >PHA02597 30 | Back alignment and domain information |
|---|
Probab=95.04 E-value=0.08 Score=48.96 Aligned_cols=93 Identities=16% Similarity=0.147 Sum_probs=57.6
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCceeechhhhcCCCCCCCcceeEEEecChhhHHHHH
Q 044020 445 PVRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAKECGILTSDGEAVEGPEFRNMSPADIIPKLQVMARSLPSDKHTLV 524 (563)
Q Consensus 445 ~~~~~~~~~I~~l~~~gi~v~i~TGd~~~~a~~~a~~lgi~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v 524 (563)
++.|++.+++++|++.+ +.+++|..+........+.+++.......++ ..+.++... .|.+++
T Consensus 74 ~~~pG~~e~L~~L~~~~-~~~i~Tn~~~~~~~~~~~~~~l~~~f~~~f~---------------~i~~~~~~~-~kp~~~ 136 (197)
T PHA02597 74 SAYDDALDVINKLKEDY-DFVAVTALGDSIDALLNRQFNLNALFPGAFS---------------EVLMCGHDE-SKEKLF 136 (197)
T ss_pred cCCCCHHHHHHHHHhcC-CEEEEeCCccchhHHHHhhCCHHHhCCCccc---------------EEEEeccCc-ccHHHH
Confidence 37899999999999985 5666777555554545666766431100000 001122211 234555
Q ss_pred HHHHHhcC-CEEEEEcCCccCHHHHhhC--Cce
Q 044020 525 TQLRNTFG-EVVAVTGDGTNDASALHEA--DIG 554 (563)
Q Consensus 525 ~~l~~~~g-~~v~~iGDg~ND~~~l~~a--~vg 554 (563)
....+++| +.+++|||..+|+.+-++| |+-
T Consensus 137 ~~a~~~~~~~~~v~vgDs~~di~aA~~a~~Gi~ 169 (197)
T PHA02597 137 IKAKEKYGDRVVCFVDDLAHNLDAAHEALSQLP 169 (197)
T ss_pred HHHHHHhCCCcEEEeCCCHHHHHHHHHHHcCCc
Confidence 54444444 5688999999999999999 983
|
2 hypothetical protein; Provisional |
| >PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases | Back alignment and domain information |
|---|
Probab=94.79 E-value=0.12 Score=45.99 Aligned_cols=92 Identities=17% Similarity=0.136 Sum_probs=70.4
Q ss_pred ccCCCCcchHHHHHHHHhCCC--eEEEEcCC-------CHHHHHHHHHHcCCCCCCCceeechhhhcCCCCCCCcceeEE
Q 044020 442 IKDPVRPGVKEAVQTCLEAGI--TVRMVTGD-------NINTARAIAKECGILTSDGEAVEGPEFRNMSPADIIPKLQVM 512 (563)
Q Consensus 442 ~~d~~~~~~~~~I~~l~~~gi--~v~i~TGd-------~~~~a~~~a~~lgi~~~~~~~~~g~~~~~~~~~~~~~~~~v~ 512 (563)
-++.+.++..+.+++|++.+. +|+|+|-- ....|..+.+.+|+.- ..+
T Consensus 56 ~~~~i~~~~~~~~~~l~~~~~~~~v~IvSNsaGs~~d~~~~~a~~~~~~lgIpv-----------------------l~h 112 (168)
T PF09419_consen 56 YEDEIPPEYAEWLNELKKQFGKDRVLIVSNSAGSSDDPDGERAEALEKALGIPV-----------------------LRH 112 (168)
T ss_pred CcCcCCHHHHHHHHHHHHHCCCCeEEEEECCCCcccCccHHHHHHHHHhhCCcE-----------------------EEe
Confidence 456789999999999999977 49999986 4889999999999862 013
Q ss_pred EecChhhHHHHHHHHHHh----cCCEEEEEcCC-ccCHHHHhhCC-ceEe
Q 044020 513 ARSLPSDKHTLVTQLRNT----FGEVVAVTGDG-TNDASALHEAD-IGLA 556 (563)
Q Consensus 513 ~~~~p~~K~~~v~~l~~~----~g~~v~~iGDg-~ND~~~l~~a~-vgia 556 (563)
....|....++++.++.+ ..+++++|||- ..|+-|-...| .+|=
T Consensus 113 ~~kKP~~~~~i~~~~~~~~~~~~p~eiavIGDrl~TDVl~gN~~G~~til 162 (168)
T PF09419_consen 113 RAKKPGCFREILKYFKCQKVVTSPSEIAVIGDRLFTDVLMGNRMGSYTIL 162 (168)
T ss_pred CCCCCccHHHHHHHHhhccCCCCchhEEEEcchHHHHHHHhhccCceEEE
Confidence 345786667888888653 25789999997 56888877766 4543
|
All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family. |
| >TIGR01680 Veg_Stor_Prot vegetative storage protein | Back alignment and domain information |
|---|
Probab=94.65 E-value=0.16 Score=48.61 Aligned_cols=82 Identities=20% Similarity=0.295 Sum_probs=54.7
Q ss_pred cCCCCcchHHHHHHHHhCCCeEEEEcCCCHH---HHHHHHHHcCCCCCCCceeechhhhcCCCCCCCcceeEEEecC---
Q 044020 443 KDPVRPGVKEAVQTCLEAGITVRMVTGDNIN---TARAIAKECGILTSDGEAVEGPEFRNMSPADIIPKLQVMARSL--- 516 (563)
Q Consensus 443 ~d~~~~~~~~~I~~l~~~gi~v~i~TGd~~~---~a~~~a~~lgi~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~--- 516 (563)
..+.-|++.+..+.+++.|++|+++|||... .+..-.++.|+..... ++-|-.
T Consensus 143 ~ApAlp~al~ly~~l~~~G~kIf~VSgR~e~~r~aT~~NL~kaGy~~~~~---------------------LiLR~~~D~ 201 (275)
T TIGR01680 143 EAPALPETLKNYNKLVSLGFKIIFLSGRLKDKQAVTEANLKKAGYHTWEK---------------------LILKDPQDN 201 (275)
T ss_pred cCCCChHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHHcCCCCcce---------------------eeecCCCCC
Confidence 4567789999999999999999999999864 2344445567754221 222211
Q ss_pred -----hhhHHHHHHHHHHhcC-CEEEEEcCCccCHH
Q 044020 517 -----PSDKHTLVTQLRNTFG-EVVAVTGDGTNDAS 546 (563)
Q Consensus 517 -----p~~K~~~v~~l~~~~g-~~v~~iGDg~ND~~ 546 (563)
.+.|...-+.+.+. | +.++.+||..+|..
T Consensus 202 ~~~~av~yKs~~R~~li~e-GYrIv~~iGDq~sDl~ 236 (275)
T TIGR01680 202 SAENAVEYKTAARAKLIQE-GYNIVGIIGDQWNDLK 236 (275)
T ss_pred ccchhHHHHHHHHHHHHHc-CceEEEEECCCHHhcc
Confidence 12344444555555 5 57899999999984
|
The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP. |
| >TIGR00685 T6PP trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=94.34 E-value=0.069 Score=51.33 Aligned_cols=45 Identities=18% Similarity=0.134 Sum_probs=37.3
Q ss_pred ecChhhHHHHHHHHHHhcC---CEEEEEcCCccCHHHHhhC--------CceEeec
Q 044020 514 RSLPSDKHTLVTQLRNTFG---EVVAVTGDGTNDASALHEA--------DIGLAMG 558 (563)
Q Consensus 514 ~~~p~~K~~~v~~l~~~~g---~~v~~iGDg~ND~~~l~~a--------~vgiamg 558 (563)
+..+.+|...++.+.+.++ ..++++||+.||.+|++.+ +.+|+|+
T Consensus 162 ~p~~~~Kg~a~~~~~~~~~~~~~~~i~iGD~~~D~~~~~~~~~~~~~~g~~~v~v~ 217 (244)
T TIGR00685 162 KPRFVNKGEIVKRLLWHQPGSGISPVYLGDDITDEDAFRVVNNQWGNYGFYPVPIG 217 (244)
T ss_pred eeCCCCHHHHHHHHHHhcccCCCceEEEcCCCcHHHHHHHHhcccCCCCeEEEEEe
Confidence 3445689999998887755 4799999999999999999 5788883
|
At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes. |
| >TIGR01684 viral_ppase viral phosphatase | Back alignment and domain information |
|---|
Probab=93.97 E-value=0.15 Score=49.48 Aligned_cols=54 Identities=7% Similarity=0.095 Sum_probs=46.4
Q ss_pred CC-cchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCceeechhhhc
Q 044020 446 VR-PGVKEAVQTCLEAGITVRMVTGDNINTARAIAKECGILTSDGEAVEGPEFRN 499 (563)
Q Consensus 446 ~~-~~~~~~I~~l~~~gi~v~i~TGd~~~~a~~~a~~lgi~~~~~~~~~g~~~~~ 499 (563)
|| |++.+++++|+++|++++++|+.+...+....+++|+......++.+.+...
T Consensus 146 irdPgV~EaL~~LkekGikLaIaTS~~Re~v~~~L~~lGLd~YFdvIIs~Gdv~~ 200 (301)
T TIGR01684 146 IRDPRIYDSLTELKKRGCILVLWSYGDRDHVVESMRKVKLDRYFDIIISGGHKAE 200 (301)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHcCCCcccCEEEECCcccc
Confidence 55 9999999999999999999999999999999999999876666666655543
|
These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade. |
| >COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=93.88 E-value=0.18 Score=47.67 Aligned_cols=95 Identities=16% Similarity=0.133 Sum_probs=65.0
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCceeechhhhcCCCCCCCcceeEEEecChhhHHHH
Q 044020 444 DPVRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAKECGILTSDGEAVEGPEFRNMSPADIIPKLQVMARSLPSDKHTL 523 (563)
Q Consensus 444 d~~~~~~~~~I~~l~~~gi~v~i~TGd~~~~a~~~a~~lgi~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~p~~K~~~ 523 (563)
-++.+++.+++++++.+ ++++++|--.........+++|+......++...+. -+....|+--..+
T Consensus 98 ~~~~~~~~~~L~~l~~~-~~l~ilTNg~~~~~~~~l~~~gl~~~Fd~v~~s~~~-------------g~~KP~~~~f~~~ 163 (229)
T COG1011 98 LPDYPEALEALKELGKK-YKLGILTNGARPHQERKLRQLGLLDYFDAVFISEDV-------------GVAKPDPEIFEYA 163 (229)
T ss_pred CccChhHHHHHHHHHhh-ccEEEEeCCChHHHHHHHHHcCChhhhheEEEeccc-------------ccCCCCcHHHHHH
Confidence 35788999999999999 999999998888899999999986643333322211 1112222323344
Q ss_pred HHHHHHhcCCEEEEEcCC-ccCHHHHhhCCc
Q 044020 524 VTQLRNTFGEVVAVTGDG-TNDASALHEADI 553 (563)
Q Consensus 524 v~~l~~~~g~~v~~iGDg-~ND~~~l~~a~v 553 (563)
.+.+... .+.+++|||+ .||+..-+.+|.
T Consensus 164 ~~~~g~~-p~~~l~VgD~~~~di~gA~~~G~ 193 (229)
T COG1011 164 LEKLGVP-PEEALFVGDSLENDILGARALGM 193 (229)
T ss_pred HHHcCCC-cceEEEECCChhhhhHHHHhcCc
Confidence 4444443 5789999997 677566677776
|
|
| >PRK10748 flavin mononucleotide phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=93.69 E-value=0.1 Score=49.97 Aligned_cols=92 Identities=11% Similarity=0.094 Sum_probs=56.7
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCceeechhhhcCCCCCCCcceeEEEecChhhHHHHH
Q 044020 445 PVRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAKECGILTSDGEAVEGPEFRNMSPADIIPKLQVMARSLPSDKHTLV 524 (563)
Q Consensus 445 ~~~~~~~~~I~~l~~~gi~v~i~TGd~~~~a~~~a~~lgi~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v 524 (563)
++.|++.++++.|++. +++.++|..+.. .+.+|+......++...+.. .....|+--..++
T Consensus 113 ~~~~gv~~~L~~L~~~-~~l~i~Tn~~~~-----~~~~gl~~~fd~i~~~~~~~-------------~~KP~p~~~~~a~ 173 (238)
T PRK10748 113 DVPQATHDTLKQLAKK-WPLVAITNGNAQ-----PELFGLGDYFEFVLRAGPHG-------------RSKPFSDMYHLAA 173 (238)
T ss_pred CCCccHHHHHHHHHcC-CCEEEEECCCch-----HHHCCcHHhhceeEecccCC-------------cCCCcHHHHHHHH
Confidence 4778999999999976 898889886543 25667654322222221110 0011222222333
Q ss_pred HHHHHhcCCEEEEEcCC-ccCHHHHhhCCceEe
Q 044020 525 TQLRNTFGEVVAVTGDG-TNDASALHEADIGLA 556 (563)
Q Consensus 525 ~~l~~~~g~~v~~iGDg-~ND~~~l~~a~vgia 556 (563)
+.+... .+.+++|||+ ..|+.+-+.||+-.+
T Consensus 174 ~~~~~~-~~~~~~VGD~~~~Di~~A~~aG~~~i 205 (238)
T PRK10748 174 EKLNVP-IGEILHVGDDLTTDVAGAIRCGMQAC 205 (238)
T ss_pred HHcCCC-hhHEEEEcCCcHHHHHHHHHCCCeEE
Confidence 333333 4789999999 599999999998544
|
|
| >KOG3040 consensus Predicted sugar phosphatase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=93.17 E-value=0.25 Score=44.66 Aligned_cols=52 Identities=21% Similarity=0.316 Sum_probs=42.4
Q ss_pred eEEEEecccCCCCcchHHHHHHHHhCCCeEEEEcCCCHHHH---HHHHHHcCCCC
Q 044020 435 TLIAVVGIKDPVRPGVKEAVQTCLEAGITVRMVTGDNINTA---RAIAKECGILT 486 (563)
Q Consensus 435 ~~lG~i~~~d~~~~~~~~~I~~l~~~gi~v~i~TGd~~~~a---~~~a~~lgi~~ 486 (563)
.+-|++..++-.-|++.+|+++|++++.+|..+|....++- ..-.++||++-
T Consensus 13 DlSGtLh~e~~avpga~eAl~rLr~~~~kVkFvTNttk~Sk~~l~~rL~rlgf~v 67 (262)
T KOG3040|consen 13 DLSGTLHIEDAAVPGAVEALKRLRDQHVKVKFVTNTTKESKRNLHERLQRLGFDV 67 (262)
T ss_pred eccceEecccccCCCHHHHHHHHHhcCceEEEEecCcchhHHHHHHHHHHhCCCc
Confidence 35699999999999999999999999999999987665544 44455677764
|
|
| >PLN02151 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=92.92 E-value=0.48 Score=47.58 Aligned_cols=35 Identities=11% Similarity=0.182 Sum_probs=30.0
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHH
Q 044020 446 VRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAKE 481 (563)
Q Consensus 446 ~~~~~~~~I~~l~~~gi~v~i~TGd~~~~a~~~a~~ 481 (563)
+.++++++|++|. .+..|+++|||+......+..-
T Consensus 121 ~~~~~~~aL~~La-~~~~vaIvSGR~~~~l~~~~~~ 155 (354)
T PLN02151 121 MSKKMRNTVRKLA-KCFPTAIVSGRCREKVSSFVKL 155 (354)
T ss_pred CCHHHHHHHHHHh-cCCCEEEEECCCHHHHHHHcCC
Confidence 6788999999999 4579999999999988877653
|
|
| >PLN02177 glycerol-3-phosphate acyltransferase | Back alignment and domain information |
|---|
Probab=92.90 E-value=0.42 Score=50.71 Aligned_cols=97 Identities=15% Similarity=0.088 Sum_probs=61.2
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHH-cCCCCCCCceeechhhhcCCCCCCCcceeEEEe------cChh
Q 044020 446 VRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAKE-CGILTSDGEAVEGPEFRNMSPADIIPKLQVMAR------SLPS 518 (563)
Q Consensus 446 ~~~~~~~~I~~l~~~gi~v~i~TGd~~~~a~~~a~~-lgi~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~------~~p~ 518 (563)
+++++.+. +++.|.+ +++|+-+..-+.++|++ +|++. +-|.+++.-... .+-.+ +.-+
T Consensus 111 l~~~a~~~---~~~~g~~-vvVSASp~~~Vepfa~~~LGid~-----VIgTeLev~~~G------~~TG~i~g~~~c~Ge 175 (497)
T PLN02177 111 VHPETWRV---FNSFGKR-YIITASPRIMVEPFVKTFLGADK-----VLGTELEVSKSG------RATGFMKKPGVLVGD 175 (497)
T ss_pred cCHHHHHH---HHhCCCE-EEEECCcHHHHHHHHHHcCCCCE-----EEecccEECcCC------EEeeeecCCCCCccH
Confidence 66665554 4556754 99999999999999987 89874 111111110000 01111 2346
Q ss_pred hHHHHHHHHHHhcCCEEEEEcCCccCHHHHhhCCceEeec
Q 044020 519 DKHTLVTQLRNTFGEVVAVTGDGTNDASALHEADIGLAMG 558 (563)
Q Consensus 519 ~K~~~v~~l~~~~g~~v~~iGDg~ND~~~l~~a~vgiamg 558 (563)
+|..-++..... .....+.||+.||.+||+.|+.+++++
T Consensus 176 ~Kv~rl~~~~g~-~~~~~aYgDS~sD~plL~~a~e~y~V~ 214 (497)
T PLN02177 176 HKRDAVLKEFGD-ALPDLGLGDRETDHDFMSICKEGYMVP 214 (497)
T ss_pred HHHHHHHHHhCC-CCceEEEECCccHHHHHHhCCccEEeC
Confidence 688777643211 112367899999999999999999887
|
|
| >COG3700 AphA Acid phosphatase (class B) [General function prediction only] | Back alignment and domain information |
|---|
Probab=92.82 E-value=0.24 Score=43.59 Aligned_cols=88 Identities=20% Similarity=0.282 Sum_probs=60.4
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCCHH----HHHHHHHHcCCCCCCCceeechhhhcCCCCCCCcceeEEEecCh-hhH
Q 044020 446 VRPGVKEAVQTCLEAGITVRMVTGDNIN----TARAIAKECGILTSDGEAVEGPEFRNMSPADIIPKLQVMARSLP-SDK 520 (563)
Q Consensus 446 ~~~~~~~~I~~l~~~gi~v~i~TGd~~~----~a~~~a~~lgi~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~p-~~K 520 (563)
+++-+++.|..-+++|=+++.+|||.+. .++.+|+...|.+.+.. +|+.-.| ..+
T Consensus 115 PKevA~qLI~MHq~RGD~i~FvTGRt~gk~d~vsk~Lak~F~i~~m~pv--------------------~f~Gdk~k~~q 174 (237)
T COG3700 115 PKEVARQLIDMHQRRGDAIYFVTGRTPGKTDTVSKTLAKNFHITNMNPV--------------------IFAGDKPKPGQ 174 (237)
T ss_pred hHHHHHHHHHHHHhcCCeEEEEecCCCCcccccchhHHhhcccCCCcce--------------------eeccCCCCccc
Confidence 5667889999999999999999999864 56777888777654333 3332222 112
Q ss_pred HHHHHHHHHhcCCEEEEEcCCccCHHHHhhCCc-eE
Q 044020 521 HTLVTQLRNTFGEVVAVTGDGTNDASALHEADI-GL 555 (563)
Q Consensus 521 ~~~v~~l~~~~g~~v~~iGDg~ND~~~l~~a~v-gi 555 (563)
..=..+++++ +-. +.-||+.||+.+-+.||+ ||
T Consensus 175 y~Kt~~i~~~-~~~-IhYGDSD~Di~AAkeaG~RgI 208 (237)
T COG3700 175 YTKTQWIQDK-NIR-IHYGDSDNDITAAKEAGARGI 208 (237)
T ss_pred ccccHHHHhc-Cce-EEecCCchhhhHHHhcCccce
Confidence 2223455555 444 445999999999999987 55
|
|
| >TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458 | Back alignment and domain information |
|---|
Probab=92.81 E-value=0.15 Score=49.32 Aligned_cols=49 Identities=29% Similarity=0.335 Sum_probs=39.6
Q ss_pred EEecccCC----CCcchHHHHHHHHhCCCeEEEEcCCCHHH---HHHHHHHcCCCC
Q 044020 438 AVVGIKDP----VRPGVKEAVQTCLEAGITVRMVTGDNINT---ARAIAKECGILT 486 (563)
Q Consensus 438 G~i~~~d~----~~~~~~~~I~~l~~~gi~v~i~TGd~~~~---a~~~a~~lgi~~ 486 (563)
|++.-.+. +-|++.++|++|+++|++++++||++..+ .....+++|+.-
T Consensus 10 Gtl~~~~~~~~~~~~~a~~al~~l~~~G~~~~~~Tn~~~~~~~~~~~~l~~~g~~~ 65 (257)
T TIGR01458 10 GVLYISDAKSGVAVPGSQEAVKRLRGASVKVRFVTNTTKESKQDLLERLQRLGFDI 65 (257)
T ss_pred CeEEeCCCcccCcCCCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHcCCCC
Confidence 55555566 88999999999999999999999976654 666677788764
|
This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published. |
| >TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase | Back alignment and domain information |
|---|
Probab=92.50 E-value=0.1 Score=47.21 Aligned_cols=85 Identities=13% Similarity=0.087 Sum_probs=58.1
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCceeechhhhcCCCCCCCcceeEEEecChhhHHHHH
Q 044020 445 PVRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAKECGILTSDGEAVEGPEFRNMSPADIIPKLQVMARSLPSDKHTLV 524 (563)
Q Consensus 445 ~~~~~~~~~I~~l~~~gi~v~i~TGd~~~~a~~~a~~lgi~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v 524 (563)
++.|++.++++ ++.++|.-+........+.+|+......++.+++.. .....|+--..++
T Consensus 90 ~~~~g~~~~L~-------~~~i~Tn~~~~~~~~~l~~~~l~~~fd~v~~~~~~~-------------~~KP~p~~f~~~~ 149 (175)
T TIGR01493 90 PPWPDSAAALA-------RVAILSNASHWAFDQFAQQAGLPWYFDRAFSVDTVR-------------AYKPDPVVYELVF 149 (175)
T ss_pred CCCCchHHHHH-------HHhhhhCCCHHHHHHHHHHCCCHHHHhhhccHhhcC-------------CCCCCHHHHHHHH
Confidence 47889999888 378999999998999999999875433344433211 1122333334555
Q ss_pred HHHHHhcCCEEEEEcCCccCHHHHhh
Q 044020 525 TQLRNTFGEVVAVTGDGTNDASALHE 550 (563)
Q Consensus 525 ~~l~~~~g~~v~~iGDg~ND~~~l~~ 550 (563)
+.+... .+.+++|||+..|+.+-+.
T Consensus 150 ~~~~~~-p~~~l~vgD~~~Di~~A~~ 174 (175)
T TIGR01493 150 DTVGLP-PDRVLMVAAHQWDLIGARK 174 (175)
T ss_pred HHHCCC-HHHeEeEecChhhHHHHhc
Confidence 555544 5789999999999987654
|
The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o |
| >TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family | Back alignment and domain information |
|---|
Probab=92.39 E-value=0.79 Score=44.98 Aligned_cols=49 Identities=20% Similarity=0.226 Sum_probs=37.5
Q ss_pred EEecccCCCCcchHHHHHHHHhCCCeEEEEcCCCHH---HHHHHHHHcCCCC
Q 044020 438 AVVGIKDPVRPGVKEAVQTCLEAGITVRMVTGDNIN---TARAIAKECGILT 486 (563)
Q Consensus 438 G~i~~~d~~~~~~~~~I~~l~~~gi~v~i~TGd~~~---~a~~~a~~lgi~~ 486 (563)
|++.-.+.+-+++.++|++|+++|++++++|+++.. ....-.+++|+..
T Consensus 11 Gtl~~~~~~~~ga~e~l~~L~~~g~~~~~~Tnns~~~~~~~~~~l~~~G~~~ 62 (279)
T TIGR01452 11 GVLWLGERVVPGAPELLDRLARAGKAALFVTNNSTKSRAEYALKFARLGFNG 62 (279)
T ss_pred CceEcCCeeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCC
Confidence 455556778888999999999999999999997644 3334456678754
|
This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association. |
| >PHA03398 viral phosphatase superfamily protein; Provisional | Back alignment and domain information |
|---|
Probab=91.75 E-value=0.4 Score=46.58 Aligned_cols=50 Identities=16% Similarity=0.058 Sum_probs=42.5
Q ss_pred CcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCceeechh
Q 044020 447 RPGVKEAVQTCLEAGITVRMVTGDNINTARAIAKECGILTSDGEAVEGPE 496 (563)
Q Consensus 447 ~~~~~~~I~~l~~~gi~v~i~TGd~~~~a~~~a~~lgi~~~~~~~~~g~~ 496 (563)
.|++.+++++|+++|+++.++|+.+...+....+.+|+......++.+.+
T Consensus 150 dp~V~EtL~eLkekGikLaIvTNg~Re~v~~~Le~lgL~~yFDvII~~g~ 199 (303)
T PHA03398 150 DPFVYDSLDELKERGCVLVLWSYGNREHVVHSLKETKLEGYFDIIICGGR 199 (303)
T ss_pred ChhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHcCCCccccEEEECCC
Confidence 38999999999999999999998888888999999999876555555443
|
|
| >PF02358 Trehalose_PPase: Trehalose-phosphatase; InterPro: IPR003337 Trehalose-phosphatases 3 | Back alignment and domain information |
|---|
Probab=91.63 E-value=0.47 Score=45.28 Aligned_cols=41 Identities=24% Similarity=0.381 Sum_probs=30.4
Q ss_pred hhHHHHHHHHHHhcCC------EEEEEcCCccCHHHHhhC------CceEeec
Q 044020 518 SDKHTLVTQLRNTFGE------VVAVTGDGTNDASALHEA------DIGLAMG 558 (563)
Q Consensus 518 ~~K~~~v~~l~~~~g~------~v~~iGDg~ND~~~l~~a------~vgiamg 558 (563)
..|+..++.+.+..+. .++++||...|-.||+.. +++|.+|
T Consensus 164 ~~KG~av~~ll~~~~~~~~~~~~~l~~GDD~tDE~~f~~~~~~~~~~~~i~V~ 216 (235)
T PF02358_consen 164 VNKGSAVRRLLEELPFAGPKPDFVLYIGDDRTDEDAFRALRELEEGGFGIKVG 216 (235)
T ss_dssp --HHHHHHHHHTTS---------EEEEESSHHHHHHHHTTTTS----EEEEES
T ss_pred CChHHHHHHHHHhcCccccccceeEEecCCCCCHHHHHHHHhcccCCCCeEEE
Confidence 3499999999887553 699999999999999874 5677777
|
1.3.12 from EC catalyse the de-phosphorylation of trehalose-6-phosphate to trehalose and orthophosphate. Trehalose is a common disaccharide of bacteria, fungi and invertebrates that appears to play a major role in desiccation tolerance. A pathway for trehalose biosynthesis may also exist in plants []. The trehalose-phosphatase signature is found in the C terminus of trehalose-6-phosphate synthase 2.4.1.15 from EC adjacent to the trehalose-6-phosphate synthase domain (see IPR001830 from INTERPRO). It would appear that the two equivalent genes in the Escherichia coli otsBA operon: otsA, the trehalose-6-phosphate synthase and otsB, trehalose-phosphatase (this family) have undergone gene fusion in most eukaryotes [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1U02_A. |
| >TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase | Back alignment and domain information |
|---|
Probab=90.51 E-value=0.4 Score=40.56 Aligned_cols=32 Identities=16% Similarity=0.145 Sum_probs=28.2
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCCHHHH
Q 044020 444 DPVRPGVKEAVQTCLEAGITVRMVTGDNINTA 475 (563)
Q Consensus 444 d~~~~~~~~~I~~l~~~gi~v~i~TGd~~~~a 475 (563)
+++.+++.+++++++++|+.++++|||+....
T Consensus 23 ~~~~~~~ie~L~~l~~~G~~IiiaTGR~~~~~ 54 (126)
T TIGR01689 23 VAPILAVIEKLRHYKALGFEIVISSSRNMRTY 54 (126)
T ss_pred cccCHHHHHHHHHHHHCCCEEEEECCCCchhh
Confidence 55788999999999999999999999987643
|
Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology. |
| >TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase | Back alignment and domain information |
|---|
Probab=90.03 E-value=1.1 Score=47.72 Aligned_cols=40 Identities=18% Similarity=0.289 Sum_probs=33.7
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCCH------------HHHHHHHHHcCCC
Q 044020 446 VRPGVKEAVQTCLEAGITVRMVTGDNI------------NTARAIAKECGIL 485 (563)
Q Consensus 446 ~~~~~~~~I~~l~~~gi~v~i~TGd~~------------~~a~~~a~~lgi~ 485 (563)
+.|++.++|++|++.|++++|+|.-+. ..+..+.+++|+.
T Consensus 198 l~pgV~e~L~~L~~~Gy~IvIvTNQ~gI~~G~~~~~~~~~ki~~iL~~lgip 249 (526)
T TIGR01663 198 IFPEIPEKLKELEADGFKICIFTNQGGIARGKINADDFKAKIEAIVAKLGVP 249 (526)
T ss_pred cccCHHHHHHHHHHCCCEEEEEECCcccccCcccHHHHHHHHHHHHHHcCCc
Confidence 468999999999999999999998555 3477788888874
|
Note that the EC number for the kinase function is: 2.7.1.78 |
| >TIGR02244 HAD-IG-Ncltidse HAD superfamily (subfamily IG) hydrolase, 5'-nucleotidase | Back alignment and domain information |
|---|
Probab=90.00 E-value=1.5 Score=43.96 Aligned_cols=104 Identities=14% Similarity=0.084 Sum_probs=66.3
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHc-C-------CCCCCCceeechh----------hhcCCCC---C
Q 044020 446 VRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAKEC-G-------ILTSDGEAVEGPE----------FRNMSPA---D 504 (563)
Q Consensus 446 ~~~~~~~~I~~l~~~gi~v~i~TGd~~~~a~~~a~~l-g-------i~~~~~~~~~g~~----------~~~~~~~---~ 504 (563)
..|++.+++++|+++|+++.++|+-+...+..+.+.+ | +......++.+.. +.....+ .
T Consensus 185 ~~pgl~elL~~Lr~~G~klfLvTNS~~~yt~~im~~l~g~~~~~~~w~~yFD~IIt~a~KP~FF~~~~pf~~v~~~~g~~ 264 (343)
T TIGR02244 185 RDPKLPLFLSKLKEHGKKLFLLTNSDYDYTDKGMKYLLGPFLGEHDWRDYFDVVIVDARKPGFFTEGRPFRQVDVETGSL 264 (343)
T ss_pred cchhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhhCCcccccchHhhCcEEEeCCCCCcccCCCCceEEEeCCCCcc
Confidence 4789999999999999999999999999999999996 6 4444444444421 1111100 0
Q ss_pred C------CcceeEEEecChhhHHHHHHHHHHhcCCEEEEEcCC-ccCHHHHh-hCCc
Q 044020 505 I------IPKLQVMARSLPSDKHTLVTQLRNTFGEVVAVTGDG-TNDASALH-EADI 553 (563)
Q Consensus 505 ~------~~~~~v~~~~~p~~K~~~v~~l~~~~g~~v~~iGDg-~ND~~~l~-~a~v 553 (563)
. +.+-.+|..- .-..+.+.+... +.+|++|||. ..|+-.-+ .+|.
T Consensus 265 ~~~~~~~l~~g~vY~gG---n~~~~~~~l~~~-~~~vlYvGD~i~~Di~~~kk~~Gw 317 (343)
T TIGR02244 265 KWGEVDGLEPGKVYSGG---SLKQFHELLKWR-GKEVLYFGDHIYGDLLRSKKKRGW 317 (343)
T ss_pred cCCccccccCCCeEeCC---CHHHHHHHHCCC-CCcEEEECCcchHHHHhhHHhcCc
Confidence 0 1111233321 122455555555 7899999998 56887665 5543
|
A TIGRFAMs model (TIGR01993) represents a (putative) family of _pyrimidine_ 5'-nucleotidases which are also subfamily I HAD's, which should not be confused with the current model. |
| >PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea | Back alignment and domain information |
|---|
Probab=89.60 E-value=1.3 Score=39.55 Aligned_cols=93 Identities=23% Similarity=0.279 Sum_probs=55.0
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcC-CCHHHHHHHHHHcCCCCCCCceeechhhhcCCCCCCCcceeEEEecChhhHHHHH
Q 044020 446 VRPGVKEAVQTCLEAGITVRMVTG-DNINTARAIAKECGILTSDGEAVEGPEFRNMSPADIIPKLQVMARSLPSDKHTLV 524 (563)
Q Consensus 446 ~~~~~~~~I~~l~~~gi~v~i~TG-d~~~~a~~~a~~lgi~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v 524 (563)
+-|++.++++.|+++|+++.++|- +.+.-|+.+.+.+++.........-.+ .--+.+..|..|..-.
T Consensus 46 lypdv~~iL~~L~~~gv~lavASRt~~P~~A~~~L~~l~i~~~~~~~~~~~~------------~F~~~eI~~gsK~~Hf 113 (169)
T PF12689_consen 46 LYPDVPEILQELKERGVKLAVASRTDEPDWARELLKLLEIDDADGDGVPLIE------------YFDYLEIYPGSKTTHF 113 (169)
T ss_dssp --TTHHHHHHHHHHCT--EEEEE--S-HHHHHHHHHHTT-C----------C------------CECEEEESSS-HHHHH
T ss_pred eCcCHHHHHHHHHHCCCEEEEEECCCChHHHHHHHHhcCCCccccccccchh------------hcchhheecCchHHHH
Confidence 789999999999999999999994 778999999999999821111111000 0123455577888887
Q ss_pred HHHHHhcC---CEEEEEcCCccCHHHHhh
Q 044020 525 TQLRNTFG---EVVAVTGDGTNDASALHE 550 (563)
Q Consensus 525 ~~l~~~~g---~~v~~iGDg~ND~~~l~~ 550 (563)
+.+++..| +.++++=|-..-....+.
T Consensus 114 ~~i~~~tgI~y~eMlFFDDe~~N~~~v~~ 142 (169)
T PF12689_consen 114 RRIHRKTGIPYEEMLFFDDESRNIEVVSK 142 (169)
T ss_dssp HHHHHHH---GGGEEEEES-HHHHHHHHT
T ss_pred HHHHHhcCCChhHEEEecCchhcceeeEe
Confidence 87776544 567777776554444443
|
The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A. |
| >TIGR02251 HIF-SF_euk Dullard-like phosphatase domain | Back alignment and domain information |
|---|
Probab=89.37 E-value=0.27 Score=43.85 Aligned_cols=94 Identities=13% Similarity=0.013 Sum_probs=62.7
Q ss_pred cccCCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC-CCCceeechhhhcCCCCCCCcceeEEEecChhh
Q 044020 441 GIKDPVRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAKECGILT-SDGEAVEGPEFRNMSPADIIPKLQVMARSLPSD 519 (563)
Q Consensus 441 ~~~d~~~~~~~~~I~~l~~~gi~v~i~TGd~~~~a~~~a~~lgi~~-~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~p~~ 519 (563)
.+.=..||++.+.++.|.+. +++++.|.....-|..+.+.++... .-..++ +.......
T Consensus 38 ~~~v~~RPgl~eFL~~l~~~-yei~I~Ts~~~~yA~~il~~ldp~~~~f~~~l-------------------~r~~~~~~ 97 (162)
T TIGR02251 38 PVYVFKRPHVDEFLERVSKW-YELVIFTASLEEYADPVLDILDRGGKVISRRL-------------------YRESCVFT 97 (162)
T ss_pred EEEEEECCCHHHHHHHHHhc-CEEEEEcCCcHHHHHHHHHHHCcCCCEEeEEE-------------------EccccEEe
Confidence 44456999999999999988 9999999999999999999998653 111111 11100001
Q ss_pred HHHHHHHHH---HhcCCEEEEEcCCccCHHHHhhCCceE
Q 044020 520 KHTLVTQLR---NTFGEVVAVTGDGTNDASALHEADIGL 555 (563)
Q Consensus 520 K~~~v~~l~---~~~g~~v~~iGDg~ND~~~l~~a~vgi 555 (563)
+..+++.|. .. ...|++|||...|..+-+.+++-+
T Consensus 98 ~~~~~K~L~~l~~~-~~~vIiVDD~~~~~~~~~~NgI~i 135 (162)
T TIGR02251 98 NGKYVKDLSLVGKD-LSKVIIIDNSPYSYSLQPDNAIPI 135 (162)
T ss_pred CCCEEeEchhcCCC-hhhEEEEeCChhhhccCccCEeec
Confidence 111333333 22 367999999999987766666544
|
This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031. |
| >COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=88.42 E-value=2 Score=41.53 Aligned_cols=45 Identities=22% Similarity=0.277 Sum_probs=37.5
Q ss_pred EEEecccCCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHH
Q 044020 437 IAVVGIKDPVRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAKE 481 (563)
Q Consensus 437 lG~i~~~d~~~~~~~~~I~~l~~~gi~v~i~TGd~~~~a~~~a~~ 481 (563)
=|++.--..+-|++.++|++|+++|++++++|..+..+...++++
T Consensus 16 DGvl~~G~~~ipga~e~l~~L~~~g~~~iflTNn~~~s~~~~~~~ 60 (269)
T COG0647 16 DGVLYRGNEAIPGAAEALKRLKAAGKPVIFLTNNSTRSREVVAAR 60 (269)
T ss_pred cCceEeCCccCchHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHHH
Confidence 388888899999999999999999999999998766555544443
|
|
| >COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=87.43 E-value=2.7 Score=37.90 Aligned_cols=87 Identities=25% Similarity=0.324 Sum_probs=54.4
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcC-----CCHHHHHHHHH----------HcCCCCCCCceeechhhhcCCCCCCCccee
Q 044020 446 VRPGVKEAVQTCLEAGITVRMVTG-----DNINTARAIAK----------ECGILTSDGEAVEGPEFRNMSPADIIPKLQ 510 (563)
Q Consensus 446 ~~~~~~~~I~~l~~~gi~v~i~TG-----d~~~~a~~~a~----------~lgi~~~~~~~~~g~~~~~~~~~~~~~~~~ 510 (563)
+.+++.+++.+++++|++++|+|- |.+.+...+.+ +.|.. +++ .
T Consensus 32 ~~~g~i~al~~l~~~gy~lVvvTNQsGi~rgyf~~~~f~~~~~~m~~~l~~~gv~------id~---------------i 90 (181)
T COG0241 32 FIPGVIPALLKLQRAGYKLVVVTNQSGIGRGYFTEADFDKLHNKMLKILASQGVK------IDG---------------I 90 (181)
T ss_pred cCccHHHHHHHHHhCCCeEEEEECCCCccccCccHHHHHHHHHHHHHHHHHcCCc------cce---------------E
Confidence 678999999999999999999996 33322222222 22211 000 1
Q ss_pred EEEecCh--------hhHHHHHHHHHHhcC---CEEEEEcCCccCHHHHhhCCce
Q 044020 511 VMARSLP--------SDKHTLVTQLRNTFG---EVVAVTGDGTNDASALHEADIG 554 (563)
Q Consensus 511 v~~~~~p--------~~K~~~v~~l~~~~g---~~v~~iGDg~ND~~~l~~a~vg 554 (563)
.+|--.| ....-+.+.+++. + ....+|||...|+.+-..+++.
T Consensus 91 ~~Cph~p~~~c~cRKP~~gm~~~~~~~~-~iD~~~s~~VGD~~~Dlq~a~n~gi~ 144 (181)
T COG0241 91 LYCPHHPEDNCDCRKPKPGMLLSALKEY-NIDLSRSYVVGDRLTDLQAAENAGIK 144 (181)
T ss_pred EECCCCCCCCCcccCCChHHHHHHHHHh-CCCccceEEecCcHHHHHHHHHCCCC
Confidence 2222222 2234444444443 5 7899999999999998888874
|
|
| >COG1877 OtsB Trehalose-6-phosphatase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=86.28 E-value=3.6 Score=39.70 Aligned_cols=112 Identities=15% Similarity=0.156 Sum_probs=72.6
Q ss_pred cccCCCCcchHHHHHHHHhC-CCeEEEEcCCCHHHHHHHHHHcCC--CCCCCcee---echhhhcC--------------
Q 044020 441 GIKDPVRPGVKEAVQTCLEA-GITVRMVTGDNINTARAIAKECGI--LTSDGEAV---EGPEFRNM-------------- 500 (563)
Q Consensus 441 ~~~d~~~~~~~~~I~~l~~~-gi~v~i~TGd~~~~a~~~a~~lgi--~~~~~~~~---~g~~~~~~-------------- 500 (563)
.....+.++..+++++|... ...++|+|||+......+..-.|+ ...+...+ +|......
T Consensus 36 p~~a~~~~~l~~lL~~Las~~~~~v~iiSGR~~~~l~~~~~v~~i~l~aehGa~~r~~~g~~~~~~~~~~~~~~~~~v~~ 115 (266)
T COG1877 36 PEAAVPDDRLLSLLQDLASDPRNVVAIISGRSLAELERLFGVPGIGLIAEHGAEVRDPNGKWWINLAEEADLRWLKEVAA 115 (266)
T ss_pred ccccCCCHHHHHHHHHHHhcCCCeEEEEeCCCHHHHHHhcCCCCccEEEecceEEecCCCCeeEecCHHHHhhHHHHHHH
Confidence 34556888999999999988 557999999999999888874443 22211111 22110000
Q ss_pred ---------C-------------------CC------------C--------CCcceeEEEecChhhHHHHHHHHHHhcC
Q 044020 501 ---------S-------------------PA------------D--------IIPKLQVMARSLPSDKHTLVTQLRNTFG 532 (563)
Q Consensus 501 ---------~-------------------~~------------~--------~~~~~~v~~~~~p~~K~~~v~~l~~~~g 532 (563)
+ .+ . ...+..|..+.+-..|+..++++.+..+
T Consensus 116 ~l~~~v~r~pGs~iE~K~~a~~~Hyr~a~~~~~~~~a~~~~~~~~~~~~~~v~~gk~vVEvrp~~~~KG~a~~~i~~~~~ 195 (266)
T COG1877 116 ILEYYVERTPGSYIERKGFAVALHYRNAEDDEGAALALAEAATLINELKLRVTPGKMVVELRPPGVSKGAAIKYIMDELP 195 (266)
T ss_pred HHHHHhhcCCCeEEEEcCcEEEEeeccCCchhhHHHHHHHHHhccccccEEEEeCceEEEEeeCCcchHHHHHHHHhcCC
Confidence 0 00 0 0112234455445569999998887644
Q ss_pred C---EEEEEcCCccCHHHHhhCC
Q 044020 533 E---VVAVTGDGTNDASALHEAD 552 (563)
Q Consensus 533 ~---~v~~iGDg~ND~~~l~~a~ 552 (563)
. .+++.||...|-.||+..+
T Consensus 196 ~~~~~~~~aGDD~TDE~~F~~v~ 218 (266)
T COG1877 196 FDGRFPIFAGDDLTDEDAFAAVN 218 (266)
T ss_pred CCCCcceecCCCCccHHHHHhhc
Confidence 3 5899999999999999987
|
|
| >TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458 | Back alignment and domain information |
|---|
Probab=85.87 E-value=0.37 Score=46.65 Aligned_cols=101 Identities=12% Similarity=0.098 Sum_probs=56.9
Q ss_pred CcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCceeechhhhcCCCCCCCcceeEEEecChhhHHHHHHH
Q 044020 447 RPGVKEAVQTCLEAGITVRMVTGDNINTARAIAKECGILTSDGEAVEGPEFRNMSPADIIPKLQVMARSLPSDKHTLVTQ 526 (563)
Q Consensus 447 ~~~~~~~I~~l~~~gi~v~i~TGd~~~~a~~~a~~lgi~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~~ 526 (563)
-++..++++.|++.++++.++|+.+..........+|+.. -+..+... .-.+..++....|.--..+++.
T Consensus 122 y~~l~~a~~~L~~~~~~~~iatn~~~~~~~~~~~~~g~g~---------~~~~i~~~-~~~~~~~~gKP~p~~~~~~~~~ 191 (257)
T TIGR01458 122 YQILNQAFRLLLDGAKPLLIAIGKGRYYKRKDGLALDVGP---------FVTALEYA-TDTKATVVGKPSKTFFLEALRA 191 (257)
T ss_pred HHHHHHHHHHHHcCCCCEEEEeCCCCCCcCCCCCCCCchH---------HHHHHHHH-hCCCceeecCCCHHHHHHHHHH
Confidence 3678889999999999999999866433222111111110 00000000 0000113334444444445555
Q ss_pred HHHhcCCEEEEEcCCc-cCHHHHhhCCc-eEeec
Q 044020 527 LRNTFGEVVAVTGDGT-NDASALHEADI-GLAMG 558 (563)
Q Consensus 527 l~~~~g~~v~~iGDg~-ND~~~l~~a~v-giamg 558 (563)
+... .++++||||.. +|+.+-+.+|+ ++.+.
T Consensus 192 ~~~~-~~~~~~vGD~~~~Di~~a~~~G~~~i~v~ 224 (257)
T TIGR01458 192 TGCE-PEEAVMIGDDCRDDVGGAQDCGMRGIQVR 224 (257)
T ss_pred hCCC-hhhEEEECCCcHHHHHHHHHcCCeEEEEC
Confidence 5433 57899999996 99999999988 44443
|
This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published. |
| >COG2503 Predicted secreted acid phosphatase [General function prediction only] | Back alignment and domain information |
|---|
Probab=82.42 E-value=9 Score=35.96 Aligned_cols=42 Identities=14% Similarity=0.152 Sum_probs=35.7
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHH----HHHHHHHcCCCC
Q 044020 445 PVRPGVKEAVQTCLEAGITVRMVTGDNINT----ARAIAKECGILT 486 (563)
Q Consensus 445 ~~~~~~~~~I~~l~~~gi~v~i~TGd~~~~----a~~~a~~lgi~~ 486 (563)
.+-|++.+.++-.-+.|.+|..+|.|.... +..-.++.|+..
T Consensus 122 k~vpGA~eFl~Yvn~~Gg~ifyiSNR~~~~~~~~T~~nLk~~g~~~ 167 (274)
T COG2503 122 KAVPGAVEFLNYVNSNGGKIFYISNRDQENEKDGTIENLKSEGLPQ 167 (274)
T ss_pred ccCccHHHHHHHHHhcCcEEEEEeccchhcccchhHHHHHHcCccc
Confidence 467899999999999999999999998765 566777788865
|
|
| >KOG3085 consensus Predicted hydrolase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=80.57 E-value=2.9 Score=39.46 Aligned_cols=101 Identities=16% Similarity=0.124 Sum_probs=65.1
Q ss_pred cCCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCceeechhhhcCCCCCCCcceeEEEecChhhHHH
Q 044020 443 KDPVRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAKECGILTSDGEAVEGPEFRNMSPADIIPKLQVMARSLPSDKHT 522 (563)
Q Consensus 443 ~d~~~~~~~~~I~~l~~~gi~v~i~TGd~~~~a~~~a~~lgi~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~p~~K~~ 522 (563)
.-++-++..+++++||++|..+.++|-=. .....+...+|+....+.++..-+. -.-...|.--..
T Consensus 111 ~~~~~~~~~~~lq~lR~~g~~l~iisN~d-~r~~~~l~~~~l~~~fD~vv~S~e~-------------g~~KPDp~If~~ 176 (237)
T KOG3085|consen 111 AWKYLDGMQELLQKLRKKGTILGIISNFD-DRLRLLLLPLGLSAYFDFVVESCEV-------------GLEKPDPRIFQL 176 (237)
T ss_pred CceeccHHHHHHHHHHhCCeEEEEecCCc-HHHHHHhhccCHHHhhhhhhhhhhh-------------ccCCCChHHHHH
Confidence 33455667799999999998888888743 2334777778875433222222111 111222333345
Q ss_pred HHHHHHHhcCCEEEEEcCC-ccCHHHHhhCCc-eEeec
Q 044020 523 LVTQLRNTFGEVVAVTGDG-TNDASALHEADI-GLAMG 558 (563)
Q Consensus 523 ~v~~l~~~~g~~v~~iGDg-~ND~~~l~~a~v-giamg 558 (563)
.++.+..+ ++++++|||. .||+..-+.+|. ++-+.
T Consensus 177 al~~l~v~-Pee~vhIgD~l~nD~~gA~~~G~~ailv~ 213 (237)
T KOG3085|consen 177 ALERLGVK-PEECVHIGDLLENDYEGARNLGWHAILVD 213 (237)
T ss_pred HHHHhCCC-hHHeEEecCccccccHhHHHcCCEEEEEc
Confidence 66666666 7899999996 899999998887 44443
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 563 | ||||
| 3ixz_A | 1034 | Pig Gastric H+K+-Atpase Complexed With Aluminium Fl | 5e-53 | ||
| 2dqs_A | 995 | Crystal Structure Of The Calcium Pump With Amppcp I | 6e-51 | ||
| 1kju_A | 994 | Ca2+-Atpase In The E2 State Length = 994 | 6e-51 | ||
| 3ba6_A | 994 | Structure Of The Ca2e1p Phosphoenzyme Intermediate | 4e-50 | ||
| 3tlm_A | 992 | Crystal Structure Of Endoplasmic Reticulum Ca2+-Atp | 5e-50 | ||
| 2zxe_A | 1028 | Crystal Structure Of The Sodium - Potassium Pump In | 2e-49 | ||
| 3b8e_A | 998 | Crystal Structure Of The Sodium-Potassium Pump Leng | 3e-49 | ||
| 3n23_A | 992 | Crystal Structure Of The High Affinity Complex Betw | 2e-48 | ||
| 3b8c_A | 885 | Crystal Structure Of A Plasma Membrane Proton Pump | 9e-31 | ||
| 1mhs_A | 920 | Model Of Neurospora Crassa Proton Atpase Length = 9 | 1e-30 | ||
| 3rfu_A | 736 | Crystal Structure Of A Copper-Transporting Pib-Type | 2e-11 | ||
| 3j08_A | 645 | High Resolution Helical Reconstruction Of The Bacte | 1e-09 | ||
| 3j09_A | 723 | High Resolution Helical Reconstruction Of The Bacte | 1e-09 | ||
| 3a1e_A | 287 | Crystal Structure Of The P- And N-Domains Of His462 | 2e-09 | ||
| 3a1c_A | 287 | Crystal Structure Of The P- And N-Domains Of Copa, | 2e-09 | ||
| 3skx_A | 280 | Crystal Structure Of The Atp Binding Domain Of Arch | 5e-09 | ||
| 3sky_A | 274 | 2.1a Crystal Structure Of The Phosphate Bound Atp B | 5e-09 | ||
| 2b8e_A | 273 | Copa Atp Binding Domain Length = 273 | 6e-09 | ||
| 2voy_I | 128 | Cryoem Model Of Copa, The Copper Transporting Atpas | 1e-07 | ||
| 3gwi_A | 170 | Crystal Structure Of Mg-Atpase Nucleotide Binding D | 3e-07 | ||
| 2hc8_A | 113 | Structure Of The A. Fulgidus Copa A-Domain Length = | 7e-04 |
| >pdb|3IXZ|A Chain A, Pig Gastric H+K+-Atpase Complexed With Aluminium Fluoride Length = 1034 | Back alignment and structure |
|
| >pdb|2DQS|A Chain A, Crystal Structure Of The Calcium Pump With Amppcp In The Absence Of Calcium Length = 995 | Back alignment and structure |
|
| >pdb|1KJU|A Chain A, Ca2+-Atpase In The E2 State Length = 994 | Back alignment and structure |
|
| >pdb|3BA6|A Chain A, Structure Of The Ca2e1p Phosphoenzyme Intermediate Of The Serca Ca2+-Atpase Length = 994 | Back alignment and structure |
|
| >pdb|3TLM|A Chain A, Crystal Structure Of Endoplasmic Reticulum Ca2+-Atpase (Serca) From Bovine Muscle Length = 992 | Back alignment and structure |
|
| >pdb|2ZXE|A Chain A, Crystal Structure Of The Sodium - Potassium Pump In The E2.2k+.Pi State Length = 1028 | Back alignment and structure |
|
| >pdb|3B8E|A Chain A, Crystal Structure Of The Sodium-Potassium Pump Length = 998 | Back alignment and structure |
|
| >pdb|3N23|A Chain A, Crystal Structure Of The High Affinity Complex Between Ouabain And The E2p Form Of The Sodium-Potassium Pump Length = 992 | Back alignment and structure |
|
| >pdb|3B8C|A Chain A, Crystal Structure Of A Plasma Membrane Proton Pump Length = 885 | Back alignment and structure |
|
| >pdb|1MHS|A Chain A, Model Of Neurospora Crassa Proton Atpase Length = 920 | Back alignment and structure |
|
| >pdb|3RFU|A Chain A, Crystal Structure Of A Copper-Transporting Pib-Type Atpase Length = 736 | Back alignment and structure |
|
| >pdb|3J08|A Chain A, High Resolution Helical Reconstruction Of The Bacterial P-Type Atpase Copper Transporter Copa Length = 645 | Back alignment and structure |
|
| >pdb|3J09|A Chain A, High Resolution Helical Reconstruction Of The Bacterial P-Type Atpase Copper Transporter Copa Length = 723 | Back alignment and structure |
|
| >pdb|3A1E|A Chain A, Crystal Structure Of The P- And N-Domains Of His462gln Mutant Copa, A Copper-Transporting P-Type Atpase, Bound With Amppcp-Mg Length = 287 | Back alignment and structure |
|
| >pdb|3A1C|A Chain A, Crystal Structure Of The P- And N-Domains Of Copa, A Copper- Transporting P-Type Atpase, Bound With Amppcp-Mg Length = 287 | Back alignment and structure |
|
| >pdb|3SKX|A Chain A, Crystal Structure Of The Atp Binding Domain Of Archaeoglobus Fulgidus Copb Length = 280 | Back alignment and structure |
|
| >pdb|3SKY|A Chain A, 2.1a Crystal Structure Of The Phosphate Bound Atp Binding Domain Of Archaeoglobus Fulgidus Copb Length = 274 | Back alignment and structure |
|
| >pdb|2B8E|A Chain A, Copa Atp Binding Domain Length = 273 | Back alignment and structure |
|
| >pdb|2VOY|I Chain I, Cryoem Model Of Copa, The Copper Transporting Atpase From Archaeoglobus Fulgidus Length = 128 | Back alignment and structure |
|
| >pdb|3GWI|A Chain A, Crystal Structure Of Mg-Atpase Nucleotide Binding Domain Length = 170 | Back alignment and structure |
|
| >pdb|2HC8|A Chain A, Structure Of The A. Fulgidus Copa A-Domain Length = 113 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 563 | |||
| 3ixz_A | 1034 | Potassium-transporting ATPase alpha; ION pump, H+, | 1e-146 | |
| 2zxe_A | 1028 | Na, K-ATPase alpha subunit; membrane protein, ION | 1e-144 | |
| 3ar4_A | 995 | Sarcoplasmic/endoplasmic reticulum calcium ATPase; | 1e-130 | |
| 1mhs_A | 920 | Proton pump, plasma membrane ATPase; ION transport | 1e-118 | |
| 3b8c_A | 885 | ATPase 2, plasma membrane-type; P-type ATPase, pro | 1e-117 | |
| 3gwi_A | 170 | Magnesium-transporting ATPase, P-type 1; P-type AT | 4e-30 | |
| 2yj3_A | 263 | Copper-transporting ATPase; hydrolase, P-type ATPa | 3e-26 | |
| 3rfu_A | 736 | Copper efflux ATPase; alpha helical, CPC, CXXC, AT | 2e-25 | |
| 3rfu_A | 736 | Copper efflux ATPase; alpha helical, CPC, CXXC, AT | 4e-06 | |
| 3skx_A | 280 | Copper-exporting P-type ATPase B; P1B-ATPase, ATP | 3e-25 | |
| 3a1c_A | 287 | Probable copper-exporting P-type ATPase A; ATP-bin | 6e-25 | |
| 3j08_A | 645 | COPA, copper-exporting P-type ATPase A; copper tra | 3e-24 | |
| 3j08_A | 645 | COPA, copper-exporting P-type ATPase A; copper tra | 5e-05 | |
| 3j09_A | 723 | COPA, copper-exporting P-type ATPase A; copper tra | 5e-24 | |
| 3j09_A | 723 | COPA, copper-exporting P-type ATPase A; copper tra | 2e-05 | |
| 2fea_A | 236 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 4e-08 | |
| 2hc8_A | 113 | PACS, cation-transporting ATPase, P-type; copper, | 2e-06 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 7e-06 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 1e-05 | |
| 1rku_A | 206 | Homoserine kinase; phosphoserine phosphatase, phos | 7e-04 | |
| 3m1y_A | 217 | Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, | 8e-04 | |
| 4eze_A | 317 | Haloacid dehalogenase-like hydrolase; magnesium bi | 8e-04 |
| >3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2xzb_A 1iwc_A 1iwf_A Length = 1034 | Back alignment and structure |
|---|
Score = 445 bits (1147), Expect = e-146
Identities = 166/590 (28%), Positives = 253/590 (42%), Gaps = 74/590 (12%)
Query: 28 VTRDGQRQKVCTYDLVVGDIVHLSIGDQVPAYGIFISGHSLLIDESSLSGQSEP----RY 83
V RDG + ++ LVVGD+V + GD+VPA + +D SSL+G+SEP
Sbjct: 181 VIRDGDKFQINADQLVVGDLVEMKGGDRVPADIRILQAQGRKVDNSSLTGESEPQTRSPE 240
Query: 84 MYEENPF-----LLAGTKVQGGSGKMLVTTVGMRTEWGKLMETLNEGGEDETPLQVKLNG 138
E+P T G+ + LV G RT G++ + ++TP+ +++
Sbjct: 241 CTHESPLETRNIAFFSTMCLEGTAQGLVVNTGDRTIIGRIASLASGVENEKTPIAIEIEH 300
Query: 139 VATIIGKIELFFSVLEFLVLIGRFLGEKVIHNEFTDWSSADALTLIDYFAVVVTIIDVAV 198
II + + F F+ + +G T + + I+ V
Sbjct: 301 FVDIIAGLAILFGATFFI--VAMCIGY----------------TFLRAMVFFMAIVVAYV 342
Query: 199 PEGLPLAVTLSLAFAMKKLMNDGALVRHLSACETMGSASCICTDKTRMLTTNHMVVDKIW 258
PEGL VT+ L+ K+L + +V++L A ET+GS S IC+DKT LT N M V +W
Sbjct: 343 PEGLLATVTVCLSLTAKRLASKNCVVKNLEAVETLGSTSVICSDKTGTLTQNRMTVSHLW 402
Query: 259 IANTISNVEGNNRKDILQSEISERVLDITLQAIFQNTGSKVVKDKD----GKNSILGTPT 314
N I + + + + S + + + +D K ++G +
Sbjct: 403 FDNHIHSADTTEDQSGQTFDQSSETWRALCRVLTLCNRAAFKSGQDAVPVPKRIVIGDAS 462
Query: 315 ESAILEFGLRLGGDFEAQRREFKIVKVEPFNSVRKKMSVLIALP---AGGMRAFCKGASE 371
E+A+L+F G+ R F V PFNS K + L KGA E
Sbjct: 463 ETALLKFSELTLGNAMGYRERFPKVCEIPFNSTNKFQLSIHTLEDPRDPRHVLVMKGAPE 522
Query: 372 IVLSMCDKVVSDNGEPVPLSEEQFRNITDVINGFASEALRTLCLAFKDL---------ND 422
VL C ++ G+ +PL E+ R L L
Sbjct: 523 RVLERCSSILI-KGQELPLDEQWREAFQTAYLSLGGLGERVLGFCQLYLSEKDYPPGYAF 581
Query: 423 SSNENNIPDSGYTLIAVVGIKDPVRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAKEC 482
N P SG + +V + DP R V +AV C AGI V MVTGD+ TA+AIA
Sbjct: 582 DVEAMNFPTSGLSFAGLVSMIDPPRATVPDAVLKCRTAGIRVIMVTGDHPITAKAIAASV 641
Query: 483 GILTSDGEA------------------------VEGPEFRNMSPADIIPKLQ-----VMA 513
GI++ E + G + ++M P++++ L+ V A
Sbjct: 642 GIISEGSETVEDIAARLRVPVDQVNRKDARACVINGMQLKDMDPSELVEALRTHPEMVFA 701
Query: 514 RSLPSDKHTLVTQLRNTFGEVVAVTGDGTNDASALHEADIGLAMGIAGTE 563
R+ P K +V + G +VAVTGDG ND+ AL +ADIG+AMGIAG++
Sbjct: 702 RTSPQQKLVIVESCQRL-GAIVAVTGDGVNDSPALKKADIGVAMGIAGSD 750
|
| >2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A Length = 1028 | Back alignment and structure |
|---|
Score = 442 bits (1138), Expect = e-144
Identities = 163/591 (27%), Positives = 248/591 (41%), Gaps = 74/591 (12%)
Query: 27 QVTRDGQRQKVCTYDLVVGDIVHLSIGDQVPAYGIFISGHSLLIDESSLSGQSEP----R 82
V RDG++ + +V GD+V + GD++PA IS H +D SSL+G+SEP
Sbjct: 175 LVIRDGEKSTINAEFVVAGDLVEVKGGDRIPADLRIISAHGCKVDNSSLTGESEPQTRSP 234
Query: 83 YMYEENPF-----LLAGTKVQGGSGKMLVTTVGMRTEWGKLMETLNEGGEDETPLQVKLN 137
ENP T G+ + +V G RT G++ + TP+ +++
Sbjct: 235 EFSSENPLETRNIAFFSTNCVEGTARGVVVYTGDRTVMGRIATLASGLEVGRTPIAIEIE 294
Query: 138 GVATIIGKIELFFSVLEFLVLIGRFLGEKVIHNEFTDWSSADALTLIDYFAVVVTIIDVA 197
II + +F V F+ + LG + ++ ++ II
Sbjct: 295 HFIHIITGVAVFLGVSFFI--LSLILGY----------------SWLEAVIFLIGIIVAN 336
Query: 198 VPEGLPLAVTLSLAFAMKKLMNDGALVRHLSACETMGSASCICTDKTRMLTTNHMVVDKI 257
VPEGL VT+ L K++ LV++L A ET+GS S IC+DKT LT N M V +
Sbjct: 337 VPEGLLATVTVCLTLTAKRMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHM 396
Query: 258 WIANTISNVEGNNRKDILQSEISERVLDITLQAIFQNTGSKVVKDKDG----KNSILGTP 313
W N I + + + + + + +D K S+ G
Sbjct: 397 WFDNQIHEADTTENQSGAAFDKTSATWSALSRIAALCNRAVFQAGQDNVPILKRSVAGDA 456
Query: 314 TESAILEFGLRLGGDFEAQRREFKIVKVEPFNSVRKKMSVLIALPA---GGMRAFCKGAS 370
+ESA+L+ G + R + PFNS K + KGA
Sbjct: 457 SESALLKCIELCCGSVQGMRDRNPKIVEIPFNSTNKYQLSIHENEKSSESRYLLVMKGAP 516
Query: 371 EIVLSMCDKVVSDNGEPVPLSEEQFRNITDVINGFASEALRTLCLAFKDLND-------- 422
E +L C ++ NG PL E+ + R L L +
Sbjct: 517 ERILDRCSTIL-LNGAEEPLKEDMKEAFQNAYLELGGLGERVLGFCHFALPEDKYNEGYP 575
Query: 423 -SSNENNIPDSGYTLIAVVGIKDPVRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAKE 481
++E N P + + ++ + DP R V +AV C AGI V MVTGD+ TA+AIAK
Sbjct: 576 FDADEPNFPTTDLCFVGLMAMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKG 635
Query: 482 CGILTSDGEA------------------------VEGPEFRNMSPADIIPKLQ-----VM 512
GI++ E V G + +++S + L V
Sbjct: 636 VGIISEGNETIEDIAARLNIPIGQVNPRDAKACVVHGSDLKDLSTEVLDDILHYHTEIVF 695
Query: 513 ARSLPSDKHTLVTQLRNTFGEVVAVTGDGTNDASALHEADIGLAMGIAGTE 563
AR+ P K +V + G +VAVTGDG ND+ AL +ADIG+AMGI+G++
Sbjct: 696 ARTSPQQKLIIVEGCQRQ-GAIVAVTGDGVNDSPALKKADIGVAMGISGSD 745
|
| >3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ... Length = 995 | Back alignment and structure |
|---|
Score = 402 bits (1036), Expect = e-130
Identities = 174/608 (28%), Positives = 270/608 (44%), Gaps = 83/608 (13%)
Query: 28 VTRDGQR--QKVCTYDLVVGDIVHLSIGDQVPAYG--IFISGHSLLIDESSLSGQSEP-- 81
V R ++ Q++ D+V GDIV +++GD+VPA + I +L +D+S L+G+S
Sbjct: 130 VYRADRKSVQRIKARDIVPGDIVEVAVGDKVPADIRILSIKSTTLRVDQSILTGESVSVI 189
Query: 82 ---RYMYEENPFL-------LAGTKVQGGSGKMLVTTVGMRTEWGKLMETLNEGGEDETP 131
+ + +GT + G +V T G+ TE GK+ + + +D+TP
Sbjct: 190 KHTEPVPDPRAVNQDKKNMLFSGTNIAAGKALGIVATTGVSTEIGKIRDQMAATEQDKTP 249
Query: 132 LQVKLNGVATIIGKIELFFSVLEFLVLIGRFLGEKVIHNEFTDWSSADALTLIDYFAVVV 191
LQ KL+ + K+ V +L+ IG F + I YF + V
Sbjct: 250 LQQKLDEFGEQLSKVISLICVAVWLINIGHF--------NDPVHGGSWIRGAIYYFKIAV 301
Query: 192 TIIDVAVPEGLPLAVTLSLAFAMKKLMNDGALVRHLSACETMGSASCICTDKTRMLTTNH 251
+ A+PEGLP +T LA +++ A+VR L + ET+G S IC+DKT LTTN
Sbjct: 302 ALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCTSVICSDKTGTLTTNQ 361
Query: 252 MVVDKIWIANTIS---------NVEGN---------NRKDILQSEISERVLDITLQAIFQ 293
M V K++I + + ++ G+ ++S + ++++
Sbjct: 362 MSVCKMFIIDKVDGDFCSLNEFSITGSTYAPEGEVLKNDKPIRSGQFDGLVELATICALC 421
Query: 294 NTGSKVVKDKDGKNSILGTPTESAILEFGLRLGGDFEAQ----------------RREFK 337
N S + G +G TE+A+ ++ R+ K
Sbjct: 422 NDSSLDFNETKGVYEKVGEATETALTTLVEKMNVFNTEVRNLSKVERANACNSVIRQLMK 481
Query: 338 IVKVEPFNSVRKKMSVLIALPAG-----GMRAFCKGASEIVLSMCDKVVSDNGEPVPLSE 392
F+ RK MSV + G + F KGA E V+ C+ V VP++
Sbjct: 482 KEFTLEFSRDRKSMSVYCSPAKSSRAAVGNKMFVKGAPEGVIDRCNYVR-VGTTRVPMTG 540
Query: 393 EQFRNITDVIN--GFASEALRTLCLAFKDLNDSSNENNIPD--------SGYTLIAVVGI 442
I VI G + LR L LA +D E + D + T + VVG+
Sbjct: 541 PVKEKILSVIKEWGTGRDTLRCLALATRDTPPKREEMVLDDSSRFMEYETDLTFVGVVGM 600
Query: 443 KDPVRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAKECGILTSD----GEAVEGPEFR 498
DP R V ++Q C +AGI V M+TGDN TA AI + GI + A G EF
Sbjct: 601 LDPPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGIFGENEEVADRAYTGREFD 660
Query: 499 NMSPAD---IIPKLQVMARSLPSDKHTLVTQLRNTFGEVVAVTGDGTNDASALHEADIGL 555
++ A+ + AR PS K +V L++ E+ A+TGDG NDA AL +A+IG+
Sbjct: 661 DLPLAEQREACRRACCFARVEPSHKSKIVEYLQSY-DEITAMTGDGVNDAPALKKAEIGI 719
Query: 556 AMGIAGTE 563
AMG +GT
Sbjct: 720 AMG-SGTA 726
|
| >1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1 Length = 920 | Back alignment and structure |
|---|
Score = 369 bits (950), Expect = e-118
Identities = 127/539 (23%), Positives = 238/539 (44%), Gaps = 72/539 (13%)
Query: 28 VTRDGQRQKVCTYDLVVGDIVHLSIGDQVPAYGIFISGHSLL-IDESSLSGQSEPRYMYE 86
V RDG +++ ++V GDI+ + G +PA G ++ + L +D+S+L+G+S ++
Sbjct: 182 VLRDGTLKEIEAPEVVPGDILQVEEGTIIPADGRIVTDDAFLQVDQSALTGESLAVDKHK 241
Query: 87 ENPFLLAGTKVQGGSGKMLVTTVGMRTEWGKLMETLNEGGEDETPLQVKLNGVATIIGKI 146
+ + A + V+ G +++T G T G+ +N LNG+ TI+ +
Sbjct: 242 GDQ-VFASSAVKRGEAFVVITATGDNTFVGRAAALVNAASGGSGHFTEVLNGIGTILLIL 300
Query: 147 ELFFSVLEFLVLIGRFLGEKVIHNEFTDWSSADALTLIDYFAVVVTIIDVAVPEGLPLAV 206
+F ++ ++ + ++ L F + +TII VP GLP V
Sbjct: 301 VIFTLLIVWVSSF--YRSNPIV----------QILE----FTLAITII--GVPVGLPAVV 342
Query: 207 TLSLAFAMKKLMNDGALVRHLSACETMGSASCICTDKTRMLTTNHMVVDKIWIANTISNV 266
T ++A L A+V+ LSA E++ +C+DKT LT N + + + V
Sbjct: 343 TTTMAVGAAYLAKKKAIVQKLSAIESLAGVEILCSDKTGTLTKNKLSLHDPY------TV 396
Query: 267 EGNNRKDILQSEISERVLDITLQAIFQNTGSKVVKDKDGKNSILGTPTESAILEFGLRLG 326
G + +D++ L A + K D + A L+ L+
Sbjct: 397 AGVDPEDLM------------LTACLAASRKKKGID----------AIDKAFLKS-LKYY 433
Query: 327 GDFEAQRREFKIVKVEPFNSVRKKMSVLIALPAGGMRAFCKGASEIVLSMCDKVVSDNGE 386
++ ++K+++ PF+ V KK+ ++ P G KGA VL ++
Sbjct: 434 PRAKSVLSKYKVLQFHPFDPVSKKVVAVVESPQGERITCVKGAPLFVLKTVEED------ 487
Query: 387 PVPLSEEQFRNITDVINGFASEALRTLCLAFKDLNDSSNENNIPDSGYTLIAVVGIKDPV 446
P+ EE + + + FA+ R+L +A K + + ++ ++ DP
Sbjct: 488 -HPIPEEVDQAYKNKVAEFATRGFRSLGVARKRG----------EGSWEILGIMPCMDPP 536
Query: 447 RPGVKEAVQTCLEAGITVRMVTGDNINTARAIAKECGILTS--DGEAVEGPEFRNMSP-- 502
R + V G++++M+TGD + AR +++ G+ T+ + E + +M
Sbjct: 537 RHDTYKTVCEAKTLGLSIKMLTGDAVGIARETSRQLGLGTNIYNAERLGLGGGGDMPGSE 596
Query: 503 -ADIIPKLQVMARSLPSDKHTLVTQLRNTFGEVVAVTGDGTNDASALHEADIGLAMGIA 560
D + A P K+ +V L+ G +VA+TGDG NDA +L +AD G+A+ +
Sbjct: 597 VYDFVEAADGFAEVFPQHKYNVVEILQQR-GYLVAMTGDGVNDAPSLKKADTGIAVEGS 654
|
| >3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana} Length = 885 | Back alignment and structure |
|---|
Score = 367 bits (944), Expect = e-117
Identities = 124/541 (22%), Positives = 234/541 (43%), Gaps = 72/541 (13%)
Query: 27 QVTRDGQRQKVCTYDLVVGDIVHLSIGDQVPAYGIFISGHSLLIDESSLSGQSEPRYMYE 86
+V RDG+ + LV GDIV + +GD +PA + G L +D+S+L+G+S P +
Sbjct: 133 KVLRDGKWSEQEAAILVPGDIVSIKLGDIIPADARLLEGDPLKVDQSALTGESLPVTKHP 192
Query: 87 ENPFLLAGTKVQGGSGKMLVTTVGMRTEWGKLMETLNEGGEDETPLQVKLNGVATIIGKI 146
+ +G+ + G + +V G+ T +GK ++ + Q L +
Sbjct: 193 GQ-EVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQ-VGHFQKVLTAIGNFCICS 250
Query: 147 ELFFSVLEFLVLIGRFLGEKVIHNEFTDWSSADALTLIDYFAVVVTIIDVAVPEGLPLAV 206
V+E +V + K D + +V+ I +P +P +
Sbjct: 251 IAIGMVIEIIV-MYPIQRRKYR----------DGID----NLLVLLI--GGIPIAMPTVL 293
Query: 207 TLSLAFAMKKLMNDGALVRHLSACETMGSASCICTDKTRMLTTNHMVVDKIWIANTISNV 266
++++A +L GA+ + ++A E M +C+DKT LT N + VDK + V
Sbjct: 294 SVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLVEVFCKGV 353
Query: 267 EGNNRKDILQSEISERVLDI-TLQAIFQNTGSKVVKDKDGKNSILGTPTESAILEFGLRL 325
E ++VL + + +N +D ++A++
Sbjct: 354 E------------KDQVLLFAAMASRVEN------QD----------AIDAAMVGM---- 381
Query: 326 GGDFEAQRREFKIVKVEPFNSVRKKMSVLIALPAGGMRAFCKGASEIVLSMCDKVVSDNG 385
D + R + V PFN V K+ ++ +G KGA E +L +
Sbjct: 382 LADPKEARAGIREVHFLPFNPVDKRTALTYIDGSGNWHRVSKGAPEQILELA-------- 433
Query: 386 EPVPLSEEQFRNITDVINGFASEALRTLCLAFKDLNDSSNENNIPDSGYTLIAVVGIKDP 445
S + + + +I+ +A LR+L +A + + + + E+ P + + + ++ + DP
Sbjct: 434 ---KASNDLSKKVLSIIDKYAERGLRSLAVARQVVPEKTKES--PGAPWEFVGLLPLFDP 488
Query: 446 VRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAKECGILTSDGEA---VEGPEFRNMSP 502
R E ++ L G+ V+M+TGD + + + G+ T+ + + + N++
Sbjct: 489 PRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGTHKDANLAS 548
Query: 503 ---ADIIPKLQVMARSLPSDKHTLVTQLRNTFGEVVAVTGDGTNDASALHEADIGLAMGI 559
++I K A P K+ +V +L+ +V +TGDG NDA AL +ADIG+A+
Sbjct: 549 IPVEELIEKADGFAGVFPEHKYEIVKKLQER-KHIVGMTGDGVNDAPALKKADIGIAVAD 607
Query: 560 A 560
A
Sbjct: 608 A 608
|
| >3gwi_A Magnesium-transporting ATPase, P-type 1; P-type ATPase, nucleotide binding, ATP binding, MGTA, membra protein, cell inner membrane; 1.60A {Escherichia coli} Length = 170 | Back alignment and structure |
|---|
Score = 115 bits (290), Expect = 4e-30
Identities = 36/141 (25%), Positives = 62/141 (43%), Gaps = 4/141 (2%)
Query: 308 SILGTPTESAILEFGLRLGGDFEAQRREFKIVKVEPFNSVRKKMSVLIALPAGGMRAFCK 367
+ L ++A+LE + ++ + PF+ R++MSV++A + CK
Sbjct: 30 TGLKNLLDTAVLEGTDEES--ARSLASRWQKIDEIPFDFERRRMSVVVAENTEHHQLVCK 87
Query: 368 GASEIVLSMCDKVVSDNGEPVPLSEEQFRNITDVINGFASEALRTLCLAFKDLNDSSNEN 427
GA + +L++C +V NGE VPL + R I V + + LR + +A K L +
Sbjct: 88 GALQEILNVCSQVR-HNGEIVPLDDIMLRKIKRVTDTLNRQGLRVVAVATKYLPAREGDY 146
Query: 428 NIPD-SGYTLIAVVGIKDPVR 447
D S L + D
Sbjct: 147 QRADESDLILEGYIAFLDHHH 167
|
| >2yj3_A Copper-transporting ATPase; hydrolase, P-type ATPase, COPB, heavy metal translocation; 2.20A {Sulfolobus solfataricus} PDB: 2iye_A 2yj6_A* 2yj5_A* 2yj4_A* Length = 263 | Back alignment and structure |
|---|
Score = 107 bits (269), Expect = 3e-26
Identities = 33/127 (25%), Positives = 56/127 (44%), Gaps = 26/127 (20%)
Query: 436 LIAVVGIKDPVRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAKECGILTSDGEAVEGP 495
IA I D RP +K+ ++ G+ + +++GD + + ++KE I
Sbjct: 127 PIASFNISDVPRPNLKDYLEKLKNEGLKIIILSGDKEDKVKELSKELNI---Q------- 176
Query: 496 EFRNMSPADIIPKLQVMARSLPSDKHTLVTQLRNTFGEVVAVTGDGTNDASALHEADIGL 555
+ + P DK ++ +L+ G V + GDG NDA+AL AD+ +
Sbjct: 177 --------------EYYSNLSPEDKVRIIEKLKQN-GNKVLMIGDGVNDAAALALADVSV 221
Query: 556 AMGIAGT 562
AMG G
Sbjct: 222 AMG-NGV 227
|
| >3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp} Length = 736 | Back alignment and structure |
|---|
Score = 110 bits (277), Expect = 2e-25
Identities = 43/127 (33%), Positives = 69/127 (54%), Gaps = 26/127 (20%)
Query: 436 LIAVVGIKDPVRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAKECGILTSDGEAVEGP 495
+A++ ++DP++ E + ++GI + M+TGD+ TA A+A GI
Sbjct: 545 TVALLVVEDPIKSSTPETILELQQSGIEIVMLTGDSKRTAEAVAGTLGI---K------- 594
Query: 496 EFRNMSPADIIPKLQVMARSLPSDKHTLVTQLRNTFGEVVAVTGDGTNDASALHEADIGL 555
+V+A +P DK +V++L++ G +VA+ GDG NDA AL +ADIG+
Sbjct: 595 --------------KVVAEIMPEDKSRIVSELKDK-GLIVAMAGDGVNDAPALAKADIGI 639
Query: 556 AMGIAGT 562
AMG GT
Sbjct: 640 AMG-TGT 645
|
| >3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp} Length = 736 | Back alignment and structure |
|---|
Score = 48.7 bits (117), Expect = 4e-06
Identities = 24/88 (27%), Positives = 42/88 (47%), Gaps = 6/88 (6%)
Query: 28 VTRDGQRQKVCTYDLVVGDIVHLSIGDQVPAYGIFISGHSLLIDESSLSGQSEPRYMYEE 87
+ DG ++V ++ VGD++ + G+++P G G S +DES ++G+ P +
Sbjct: 230 IKEDGSEEEVSLDNVAVGDLLRVRPGEKIPVDGEVQEGRS-FVDESMVTGEPIP---VAK 285
Query: 88 NP--FLLAGTKVQGGSGKMLVTTVGMRT 113
++ T Q GS M VG T
Sbjct: 286 EASAKVIGATINQTGSFVMKALHVGSDT 313
|
| >3skx_A Copper-exporting P-type ATPase B; P1B-ATPase, ATP binding domain, copper(II) transporter, MEMB protein, hydrolase; 1.59A {Archaeoglobus fulgidus} PDB: 3sky_A* Length = 280 | Back alignment and structure |
|---|
Score = 104 bits (262), Expect = 3e-25
Identities = 41/127 (32%), Positives = 61/127 (48%), Gaps = 27/127 (21%)
Query: 436 LIAVVGIKDPVRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAKECGILTSDGEAVEGP 495
+ V+ + D +RP +EA+ GI M+TGDN A+ +A+E G+ D
Sbjct: 135 VSGVIALADRIRPESREAISKLKAIGIKCMMLTGDNRFVAKWVAEELGL---D------- 184
Query: 496 EFRNMSPADIIPKLQVMARSLPSDKHTLVTQLRNTFGEVVAVTGDGTNDASALHEADIGL 555
A LP +K V +++ V A+ GDG NDA AL +AD+G+
Sbjct: 185 --------------DYFAEVLPHEKAEKVKEVQQ--KYVTAMVGDGVNDAPALAQADVGI 228
Query: 556 AMGIAGT 562
A+G AGT
Sbjct: 229 AIG-AGT 234
|
| >3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I Length = 287 | Back alignment and structure |
|---|
Score = 103 bits (260), Expect = 6e-25
Identities = 43/127 (33%), Positives = 63/127 (49%), Gaps = 27/127 (21%)
Query: 436 LIAVVGIKDPVRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAKECGILTSDGEAVEGP 495
+ ++ + D ++ K AVQ GI V M+TGDN +A AI++E + D
Sbjct: 154 VEGIIAVSDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNL---D------- 203
Query: 496 EFRNMSPADIIPKLQVMARSLPSDKHTLVTQLRNTFGEVVAVTGDGTNDASALHEADIGL 555
V+A LP K V +L+ EVVA GDG NDA AL +AD+G+
Sbjct: 204 --------------LVIAEVLPHQKSEEVKKLQA--KEVVAFVGDGINDAPALAQADLGI 247
Query: 556 AMGIAGT 562
A+G +G+
Sbjct: 248 AVG-SGS 253
|
| >3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} Length = 645 | Back alignment and structure |
|---|
Score = 106 bits (266), Expect = 3e-24
Identities = 43/127 (33%), Positives = 63/127 (49%), Gaps = 27/127 (21%)
Query: 436 LIAVVGIKDPVRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAKECGILTSDGEAVEGP 495
+ ++ + D ++ K AVQ GI V M+TGDN +A AI++E + D
Sbjct: 448 VEGIIAVSDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNL---D------- 497
Query: 496 EFRNMSPADIIPKLQVMARSLPSDKHTLVTQLRNTFGEVVAVTGDGTNDASALHEADIGL 555
V+A LP K V +L+ EVVA GDG NDA AL +AD+G+
Sbjct: 498 --------------LVIAEVLPHQKSEEVKKLQA--KEVVAFVGDGINDAPALAQADLGI 541
Query: 556 AMGIAGT 562
A+G +G+
Sbjct: 542 AVG-SGS 547
|
| >3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} Length = 645 | Back alignment and structure |
|---|
Score = 45.2 bits (108), Expect = 5e-05
Identities = 28/88 (31%), Positives = 44/88 (50%), Gaps = 6/88 (6%)
Query: 28 VTRDGQRQKVCTYDLVVGDIVHLSIGDQVPAYGIFISGHSLLIDESSLSGQSEPRYMYEE 87
V RDG+ V ++ VGDIV + G+++P G+ + G S +DES +SG+ P +
Sbjct: 137 VIRDGKEIAVPVEEVAVGDIVIVRPGEKIPVDGVVVEGES-YVDESMISGEPVP---VLK 192
Query: 88 NP--FLLAGTKVQGGSGKMLVTTVGMRT 113
+ + T G K+ T VG T
Sbjct: 193 SKGDEVFGATINNTGVLKIRATRVGGET 220
|
| >3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} Length = 723 | Back alignment and structure |
|---|
Score = 105 bits (265), Expect = 5e-24
Identities = 43/127 (33%), Positives = 63/127 (49%), Gaps = 27/127 (21%)
Query: 436 LIAVVGIKDPVRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAKECGILTSDGEAVEGP 495
+ ++ + D ++ K AVQ GI V M+TGDN +A AI++E + D
Sbjct: 526 VEGIIAVSDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNL---D------- 575
Query: 496 EFRNMSPADIIPKLQVMARSLPSDKHTLVTQLRNTFGEVVAVTGDGTNDASALHEADIGL 555
V+A LP K V +L+ EVVA GDG NDA AL +AD+G+
Sbjct: 576 --------------LVIAEVLPHQKSEEVKKLQA--KEVVAFVGDGINDAPALAQADLGI 619
Query: 556 AMGIAGT 562
A+G +G+
Sbjct: 620 AVG-SGS 625
|
| >3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} Length = 723 | Back alignment and structure |
|---|
Score = 46.7 bits (112), Expect = 2e-05
Identities = 28/88 (31%), Positives = 44/88 (50%), Gaps = 6/88 (6%)
Query: 28 VTRDGQRQKVCTYDLVVGDIVHLSIGDQVPAYGIFISGHSLLIDESSLSGQSEPRYMYEE 87
V RDG+ V ++ VGDIV + G+++P G+ + G S +DES +SG+ P +
Sbjct: 215 VIRDGKEIAVPVEEVAVGDIVIVRPGEKIPVDGVVVEGES-YVDESMISGEPVP---VLK 270
Query: 88 NP--FLLAGTKVQGGSGKMLVTTVGMRT 113
+ + T G K+ T VG T
Sbjct: 271 SKGDEVFGATINNTGVLKIRATRVGGET 298
|
| >2fea_A 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; 2633731, structural genomics, joint center for structural GE JCSG; HET: MSE; 2.00A {Bacillus subtilis} SCOP: c.108.1.20 Length = 236 | Back alignment and structure |
|---|
Score = 53.6 bits (129), Expect = 4e-08
Identities = 17/129 (13%), Positives = 39/129 (30%), Gaps = 17/129 (13%)
Query: 436 LIAVVGIKDPVRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAKECGI--------LTS 487
+ + V +R G +E V E I +++G + + +
Sbjct: 68 ITSFVLEDAKIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLEGIVEKDRIYCNHASF 127
Query: 488 DGEAVEGPEFRNMSPADIIPKLQVMARSLPSDKHTLVTQLRNTFGEVVAVTGDGTNDASA 547
D + + + K +++ +L ++ + GD D A
Sbjct: 128 DNDYIHIDWPHSCKGTCSNQCGC--------CKPSVIHELSEPNQYIIMI-GDSVTDVEA 178
Query: 548 LHEADIGLA 556
+D+ A
Sbjct: 179 AKLSDLCFA 187
|
| >2hc8_A PACS, cation-transporting ATPase, P-type; copper, COPA, COPB, actuator, transport protein; 1.65A {Archaeoglobus fulgidus} PDB: 2voy_F Length = 113 | Back alignment and structure |
|---|
Score = 45.9 bits (110), Expect = 2e-06
Identities = 28/88 (31%), Positives = 44/88 (50%), Gaps = 6/88 (6%)
Query: 28 VTRDGQRQKVCTYDLVVGDIVHLSIGDQVPAYGIFISGHSLLIDESSLSGQSEPRYMYEE 87
V RDG+ V ++ VGDIV + G+++P G+ + G S +DES +SG+ P +
Sbjct: 16 VIRDGKEIAVPVEEVAVGDIVIVRPGEKIPVDGVVVEGES-YVDESMISGEPVP---VLK 71
Query: 88 NP--FLLAGTKVQGGSGKMLVTTVGMRT 113
+ + T G K+ T VG T
Sbjct: 72 SKGDEVFGATINNTGVLKIRATRVGGET 99
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 47.9 bits (113), Expect = 7e-06
Identities = 66/491 (13%), Positives = 132/491 (26%), Gaps = 154/491 (31%)
Query: 7 DYKQSLQFRDL---------DREKKKIFIQVTRDGQ---------RQKVCTYDLVVGDIV 48
+ + +D+ E I + ++ V +++
Sbjct: 28 AFVDNFDCKDVQDMPKSILSKEEIDHIIMSKDAVSGTLRLFWTLLSKQEEMVQKFVEEVL 87
Query: 49 H---------LSIGDQVPA--YGIFISGHSLLI-DESSLSGQSEPRY-MYEE-------- 87
+ + P+ ++I L D + + R Y +
Sbjct: 88 RINYKFLMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQVFAKYNVSRLQPYLKLRQALLEL 147
Query: 88 --NPFLLAGTKVQG--GSGK-MLVTTVGMRTEWGKLMETLNEGGEDETPLQVKLNGVATI 142
+L + G GSGK + ++ + +
Sbjct: 148 RPAKNVL----IDGVLGSGKTWVA------------LDVCL----SYKVQCKMDFKIFWL 187
Query: 143 -IGKIELFFSVLEFLVLIGRFLGEKVIHNEFTDWSSADALTLIDYFAVVVTIIDVAVPEG 201
+ +VLE L +K+++ +W+S D+ + + I E
Sbjct: 188 NLKNCNSPETVLEML--------QKLLYQIDPNWTS-----RSDHSSNIKLRIHSIQAE- 233
Query: 202 LPLAVTLSLAFAMKKLMNDGAL-----VRHLSACETMGSASCICTDKTRMLTTNHMVVDK 256
L K N L V++ A SC K + T V D
Sbjct: 234 ------LRRLLKSKPYEN--CLLVLLNVQNAKAWNAFN-LSC----KILLTTRFKQVTDF 280
Query: 257 IWIANTISNVEGNNRKDILQSEISERVLDITLQAIFQNTGSKVVKDKDGKNSILGTPTES 316
+ A T +++ ++ L + + +L K + + L P E
Sbjct: 281 L-SAATTTHISLDHHSMTLTPDEVKSLL------------LKYLDCRPQD---L--PREV 322
Query: 317 ------AILEFGLRLGGDFEAQRREFKIVKVEPFNSVRKKMSVLIALPAGGMRA------ 364
+ + D A +K V + ++ + S L L R
Sbjct: 323 LTTNPRRLSIIAESI-RDGLATWDNWKHVNCDKLTTII-ESS-LNVLEPAEYRKMFDRLS 379
Query: 365 -FCKGA--SEIVLSMCDKVVSDNGEPVPL-SEEQFRNITDVINGFASEALRTLCLAFKDL 420
F A I+LS+ + + ++ V+N L K
Sbjct: 380 VFPPSAHIPTILLSL-------------IWFDVIKSDVMVVVNKLHK-----YSLVEKQP 421
Query: 421 NDSSNENNIPD 431
+S+ IP
Sbjct: 422 KESTIS--IPS 430
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 47.5 bits (112), Expect = 1e-05
Identities = 57/378 (15%), Positives = 103/378 (27%), Gaps = 121/378 (32%)
Query: 7 DYKQSLQFRDLD--REKK---------KIFIQVTRDGQRQKVCTYDLVVGDIVHLSIGDQ 55
Y+ L L + K KI + TR K T L H+S+
Sbjct: 242 PYENCLL--VLLNVQNAKAWNAFNLSCKILL-TTRF----KQVTDFLSAATTTHISLDHH 294
Query: 56 VPAY------GIFISGHSLLIDESSLSGQSEPRYMYEENPFLLAGTKVQGGSGKMLVTTV 109
+ + L L PR + NP L+ + + +
Sbjct: 295 SMTLTPDEVKSLLLK--YLDCRPQDL-----PREVLTTNPRRLSII------AESIRDGL 341
Query: 110 GMRTEW-----GKLMETLNEGGEDETPLQVKLNGVATIIGKIELF--FSVLEFLVLI--- 159
W KL + P + + ++F SV I
Sbjct: 342 ATWDNWKHVNCDKLTTIIESSLNVLEPAEYR-----------KMFDRLSVFPPSAHIPTI 390
Query: 160 --GRFLGEKV------IHNEFTDWSSADALTLIDYFAVVVTIIDVAVPEGLPLAVTLSLA 211
+ + + N+ +S L ++I + L L V L
Sbjct: 391 LLSLIWFDVIKSDVMVVVNKLHKYS----LVEKQPKESTISIPSIY----LELKVKLENE 442
Query: 212 FAM-KKLMN------------------DG----ALVRHLSACETMGSASCICTDKTRMLT 248
+A+ + +++ D + HL E ++ +
Sbjct: 443 YALHRSIVDHYNIPKTFDSDDLIPPYLDQYFYSHIGHHLKNIEH--------PERMTLFR 494
Query: 249 TNHMVVDKIWIANTISNVEGNNRKDILQSEISERVLDITLQAIFQNTGSKVVKDKDGKNS 308
+ +D ++ I R D S +L+ Q F + D D K
Sbjct: 495 --MVFLDFRFLEQKI-------RHDSTAWNASGSILNTLQQLKFY---KPYICDNDPKYE 542
Query: 309 ILGTPTESAILEFGLRLG 326
L +AIL+F ++
Sbjct: 543 RL----VNAILDFLPKIE 556
|
| >1rku_A Homoserine kinase; phosphoserine phosphatase, phosphoserine:homoserine phosphotransferase, THRH, phosphoserine phosphoryl donor; 1.47A {Pseudomonas aeruginosa} SCOP: c.108.1.11 PDB: 1rkv_A Length = 206 | Back alignment and structure |
|---|
Score = 40.3 bits (95), Expect = 7e-04
Identities = 22/117 (18%), Positives = 38/117 (32%), Gaps = 27/117 (23%)
Query: 448 PGVKEAVQTCLEAGITVRMVTGDNINTARAIAKECGI--------LTSDGEAVEGPEFRN 499
G E V L V +++ ++ + ++ G D + V G + R
Sbjct: 72 EGAVEFVDW-LRERFQVVILSDTFYEFSQPLMRQLGFPTLLCHKLEIDDSDRVVGYQLRQ 130
Query: 500 MSPADIIPKLQVMARSLPSDKHTLVTQLRNTFGEVVAVTGDGTNDASALHEADIGLA 556
K V ++ + V+A GD ND + L EA G+
Sbjct: 131 -----------------KDPKRQSVIAFKSLYYRVIAA-GDSYNDTTMLSEAHAGIL 169
|
| >3m1y_A Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, phophoserine phosphatase, protein structure initiative, structural genomics; 2.40A {Helicobacter pylori} Length = 217 | Back alignment and structure |
|---|
Score = 39.9 bits (94), Expect = 8e-04
Identities = 21/127 (16%), Positives = 33/127 (25%), Gaps = 34/127 (26%)
Query: 445 PVRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAKECGI--------LTSDGE---AVE 493
P+ G E V E V +G + + + V
Sbjct: 75 PLFEGALELVSALKEKNYKVVCFSGGFDLATNHYRDLLHLDAAFSNTLIVENDALNGLVT 134
Query: 494 GPEFRNMSPADIIPKLQVMARSLPSDKHTLVTQLRNTFG----EVVAVTGDGTNDASALH 549
G ++ K ++ L+ + V GDG ND S
Sbjct: 135 GH---------MMFS---------HSKGEMLLVLQRLLNISKTNTLVV-GDGANDLSMFK 175
Query: 550 EADIGLA 556
A I +A
Sbjct: 176 HAHIKIA 182
|
| >4eze_A Haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 2.27A {Salmonella enterica subsp} Length = 317 | Back alignment and structure |
|---|
Score = 40.5 bits (95), Expect = 8e-04
Identities = 19/127 (14%), Positives = 36/127 (28%), Gaps = 34/127 (26%)
Query: 445 PVRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAKECGI--------LTSDGE---AVE 493
+ PG+ + G +++G + + + D +
Sbjct: 179 TLSPGLLTILPVIKAKGFKTAIISGGLDIFTQRLKARYQLDYAFSNTVEIRDNVLTDNIT 238
Query: 494 GPEFRNMSPADIIPKLQVMARSLPSDKHTLVTQLRNTFG----EVVAVTGDGTNDASALH 549
P I+ ++K + L ++A GDG ND L
Sbjct: 239 LP---------IMNA---------ANKKQTLVDLAARLNIATENIIAC-GDGANDLPMLE 279
Query: 550 EADIGLA 556
A G+A
Sbjct: 280 HAGTGIA 286
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 563 | |||
| 3ixz_A | 1034 | Potassium-transporting ATPase alpha; ION pump, H+, | 100.0 | |
| 2zxe_A | 1028 | Na, K-ATPase alpha subunit; membrane protein, ION | 100.0 | |
| 3ar4_A | 995 | Sarcoplasmic/endoplasmic reticulum calcium ATPase; | 100.0 | |
| 1mhs_A | 920 | Proton pump, plasma membrane ATPase; ION transport | 100.0 | |
| 3b8c_A | 885 | ATPase 2, plasma membrane-type; P-type ATPase, pro | 100.0 | |
| 3rfu_A | 736 | Copper efflux ATPase; alpha helical, CPC, CXXC, AT | 100.0 | |
| 3j08_A | 645 | COPA, copper-exporting P-type ATPase A; copper tra | 100.0 | |
| 3j09_A | 723 | COPA, copper-exporting P-type ATPase A; copper tra | 100.0 | |
| 2hc8_A | 113 | PACS, cation-transporting ATPase, P-type; copper, | 99.94 | |
| 2yj3_A | 263 | Copper-transporting ATPase; hydrolase, P-type ATPa | 99.89 | |
| 2kij_A | 124 | Copper-transporting ATPase 1; actuator, menkes dis | 99.93 | |
| 3a1c_A | 287 | Probable copper-exporting P-type ATPase A; ATP-bin | 99.91 | |
| 3skx_A | 280 | Copper-exporting P-type ATPase B; P1B-ATPase, ATP | 99.84 | |
| 3gwi_A | 170 | Magnesium-transporting ATPase, P-type 1; P-type AT | 99.8 | |
| 4fe3_A | 297 | Cytosolic 5'-nucleotidase 3; substrate complex, HA | 99.63 | |
| 1l6r_A | 227 | Hypothetical protein TA0175; structural genomics, | 99.19 | |
| 3n07_A | 195 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; | 99.08 | |
| 3ewi_A | 168 | N-acylneuraminate cytidylyltransferase; beta barre | 99.08 | |
| 1k1e_A | 180 | Deoxy-D-mannose-octulosonate 8-phosphate phosphat; | 99.03 | |
| 3mn1_A | 189 | Probable YRBI family phosphatase; structural genom | 99.03 | |
| 3ij5_A | 211 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; | 99.02 | |
| 3dnp_A | 290 | Stress response protein YHAX; structural PSI-2, pr | 98.97 | |
| 3pgv_A | 285 | Haloacid dehalogenase-like hydrolase; structural g | 98.96 | |
| 3mmz_A | 176 | Putative HAD family hydrolase; structural genomics | 98.96 | |
| 4dw8_A | 279 | Haloacid dehalogenase-like hydrolase; HAD, putativ | 98.91 | |
| 3mpo_A | 279 | Predicted hydrolase of the HAD superfamily; SGX, P | 98.89 | |
| 2pq0_A | 258 | Hypothetical conserved protein GK1056; hyopthetica | 98.88 | |
| 3dao_A | 283 | Putative phosphatse; structural genomics, joint ce | 98.85 | |
| 3n1u_A | 191 | Hydrolase, HAD superfamily, subfamily III A; struc | 98.84 | |
| 3e8m_A | 164 | Acylneuraminate cytidylyltransferase; 2-keto-3-deo | 98.8 | |
| 1l7m_A | 211 | Phosphoserine phosphatase; rossmann fold, four-hel | 98.79 | |
| 1u02_A | 239 | Trehalose-6-phosphate phosphatase related protein; | 98.75 | |
| 3n28_A | 335 | Phosphoserine phosphatase; HAD family hydrolase, s | 98.74 | |
| 3fzq_A | 274 | Putative hydrolase; YP_001086940.1, putative haloa | 98.73 | |
| 2zos_A | 249 | MPGP, mannosyl-3-phosphoglycerate phosphatase; hal | 98.71 | |
| 2r8e_A | 188 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphata | 98.71 | |
| 3r4c_A | 268 | Hydrolase, haloacid dehalogenase-like hydrolase; h | 98.69 | |
| 2p9j_A | 162 | Hypothetical protein AQ2171; secsg, riken, PSI, st | 98.67 | |
| 3fvv_A | 232 | Uncharacterized protein; unknown function, structu | 98.66 | |
| 3l7y_A | 304 | Putative uncharacterized protein SMU.1108C; hydrol | 98.66 | |
| 1wr8_A | 231 | Phosphoglycolate phosphatase; alpha / beta core do | 98.65 | |
| 1rkq_A | 282 | Hypothetical protein YIDA; two domain structure wi | 98.64 | |
| 4ap9_A | 201 | Phosphoserine phosphatase; hydrolase, haloacid deh | 98.64 | |
| 3m1y_A | 217 | Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, | 98.63 | |
| 3zx4_A | 259 | MPGP, mannosyl-3-phosphoglycerate phosphatase; hyd | 98.62 | |
| 4eze_A | 317 | Haloacid dehalogenase-like hydrolase; magnesium bi | 98.61 | |
| 1xvi_A | 275 | MPGP, YEDP, putative mannosyl-3-phosphoglycerate p | 98.57 | |
| 3m9l_A | 205 | Hydrolase, haloacid dehalogenase-like family; HAD | 98.56 | |
| 2b30_A | 301 | Pvivax hypothetical protein; SGPP, structural geno | 98.55 | |
| 4ex6_A | 237 | ALNB; modified rossman fold, phosphatase, magnesiu | 98.55 | |
| 3p96_A | 415 | Phosphoserine phosphatase SERB; ssgcid, structural | 98.54 | |
| 1rku_A | 206 | Homoserine kinase; phosphoserine phosphatase, phos | 98.5 | |
| 1te2_A | 226 | Putative phosphatase; structural genomics, phospha | 98.47 | |
| 1rlm_A | 271 | Phosphatase; HAD family, rossman fold, hydrolase; | 98.46 | |
| 1s2o_A | 244 | SPP, sucrose-phosphatase; phosphohydrolase, HAD su | 98.46 | |
| 3nas_A | 233 | Beta-PGM, beta-phosphoglucomutase; PSI, structural | 98.46 | |
| 3mc1_A | 226 | Predicted phosphatase, HAD family; PSI2, NYSGXRC, | 98.45 | |
| 1nf2_A | 268 | Phosphatase; structural proteomics, HAD NEW fold, | 98.44 | |
| 1nnl_A | 225 | L-3-phosphoserine phosphatase; PSP, HPSP, phospho- | 98.43 | |
| 1svj_A | 156 | Potassium-transporting ATPase B chain; alpha-beta | 98.42 | |
| 1nrw_A | 288 | Hypothetical protein, haloacid dehalogenase-like h | 98.41 | |
| 2pib_A | 216 | Phosphorylated carbohydrates phosphatase TM_1254; | 98.41 | |
| 2go7_A | 207 | Hydrolase, haloacid dehalogenase-like family; stru | 98.4 | |
| 3nuq_A | 282 | Protein SSM1, putative nucleotide phosphatase; sup | 98.4 | |
| 3kzx_A | 231 | HAD-superfamily hydrolase, subfamily IA, variant; | 98.37 | |
| 3e58_A | 214 | Putative beta-phosphoglucomutase; structu genomics | 98.37 | |
| 2wf7_A | 221 | Beta-PGM, beta-phosphoglucomutase; transition stat | 98.36 | |
| 2rbk_A | 261 | Putative uncharacterized protein; HAD-like phospha | 98.35 | |
| 3s6j_A | 233 | Hydrolase, haloacid dehalogenase-like family; stru | 98.35 | |
| 3um9_A | 230 | Haloacid dehalogenase, type II; haloacid dehalogen | 98.35 | |
| 2om6_A | 235 | Probable phosphoserine phosphatase; rossmann fold, | 98.32 | |
| 2nyv_A | 222 | Pgpase, PGP, phosphoglycolate phosphatase; structu | 98.32 | |
| 3kd3_A | 219 | Phosphoserine phosphohydrolase-like protein; csgid | 98.32 | |
| 4gxt_A | 385 | A conserved functionally unknown protein; structur | 98.31 | |
| 2hsz_A | 243 | Novel predicted phosphatase; structural genomics, | 98.31 | |
| 1swv_A | 267 | Phosphonoacetaldehyde hydrolase; HAD enzyme superf | 98.3 | |
| 3umb_A | 233 | Dehalogenase-like hydrolase; 2.20A {Ralstonia sola | 98.3 | |
| 2wm8_A | 187 | MDP-1, magnesium-dependent phosphatase 1; haloacid | 98.3 | |
| 3d6j_A | 225 | Putative haloacid dehalogenase-like hydrolase; str | 98.3 | |
| 3qnm_A | 240 | Haloacid dehalogenase-like hydrolase; structural g | 98.24 | |
| 1zrn_A | 232 | L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseud | 98.23 | |
| 2hcf_A | 234 | Hydrolase, haloacid dehalogenase-like family; NP_6 | 98.22 | |
| 3l8h_A | 179 | Putative haloacid dehalogenase-like hydrolase; HAD | 98.21 | |
| 3iru_A | 277 | Phoshonoacetaldehyde hydrolase like protein; phosp | 98.21 | |
| 3u26_A | 234 | PF00702 domain protein; structural genomics, PSI-b | 98.2 | |
| 2no4_A | 240 | (S)-2-haloacid dehalogenase IVA; HAD superfamily, | 98.16 | |
| 2hoq_A | 241 | Putative HAD-hydrolase PH1655; haloacid dehalogena | 98.15 | |
| 3qxg_A | 243 | Inorganic pyrophosphatase; hydrolase, magnesium bi | 98.14 | |
| 2i6x_A | 211 | Hydrolase, haloacid dehalogenase-like family; HAD | 98.13 | |
| 3cnh_A | 200 | Hydrolase family protein; NP_295428.1, predicted h | 98.13 | |
| 3dv9_A | 247 | Beta-phosphoglucomutase; structural genomics, APC6 | 98.12 | |
| 3sd7_A | 240 | Putative phosphatase; structural genomics, haloaci | 98.11 | |
| 2fi1_A | 190 | Hydrolase, haloacid dehalogenase-like family; stru | 98.09 | |
| 2hi0_A | 240 | Putative phosphoglycolate phosphatase; YP_619066.1 | 98.08 | |
| 2fea_A | 236 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 98.06 | |
| 1y8a_A | 332 | Hypothetical protein AF1437; structural genomics, | 98.06 | |
| 3ddh_A | 234 | Putative haloacid dehalogenase-like family hydrol; | 98.05 | |
| 4eek_A | 259 | Beta-phosphoglucomutase-related protein; hydrolase | 98.05 | |
| 1qq5_A | 253 | Protein (L-2-haloacid dehalogenase); hydrolase; 1. | 98.02 | |
| 2hdo_A | 209 | Phosphoglycolate phosphatase; NP_784602.1, structu | 98.02 | |
| 2w43_A | 201 | Hypothetical 2-haloalkanoic acid dehalogenase; hyd | 98.01 | |
| 2qlt_A | 275 | (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, sac | 98.0 | |
| 2ah5_A | 210 | COG0546: predicted phosphatases; MCSG, structural | 98.0 | |
| 3l5k_A | 250 | Protein GS1, haloacid dehalogenase-like hydrolase | 98.0 | |
| 3gyg_A | 289 | NTD biosynthesis operon putative hydrolase NTDB; P | 97.98 | |
| 3k1z_A | 263 | Haloacid dehalogenase-like hydrolase domain-conta | 97.96 | |
| 2gmw_A | 211 | D,D-heptose 1,7-bisphosphate phosphatase; Zn-bindi | 97.95 | |
| 2pr7_A | 137 | Haloacid dehalogenase/epoxide hydrolase family; NP | 97.94 | |
| 3f9r_A | 246 | Phosphomannomutase; trypanosome glycobiology struc | 97.94 | |
| 3umg_A | 254 | Haloacid dehalogenase; defluorinase, hydrolase; 2. | 97.94 | |
| 3umc_A | 254 | Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeru | 97.94 | |
| 2pke_A | 251 | Haloacid delahogenase-like family hydrolase; NP_63 | 97.92 | |
| 3ed5_A | 238 | YFNB; APC60080, bacillus subtilis subsp. subtilis | 97.88 | |
| 2fdr_A | 229 | Conserved hypothetical protein; SAD, structural ge | 97.86 | |
| 4dcc_A | 229 | Putative haloacid dehalogenase-like hydrolase; mag | 97.82 | |
| 3ib6_A | 189 | Uncharacterized protein; structural genomics, unkn | 97.82 | |
| 2b0c_A | 206 | Putative phosphatase; alpha-D-glucose-1-phosphate, | 97.8 | |
| 3smv_A | 240 | S-(-)-azetidine-2-carboxylate hydrolase; haloacid | 97.78 | |
| 3kbb_A | 216 | Phosphorylated carbohydrates phosphatase TM_1254; | 97.75 | |
| 3pdw_A | 266 | Uncharacterized hydrolase YUTF; structural genomic | 97.72 | |
| 2o2x_A | 218 | Hypothetical protein; structural genomics, joint c | 97.69 | |
| 3qgm_A | 268 | P-nitrophenyl phosphatase (PHO2); structural genom | 97.64 | |
| 2gfh_A | 260 | Haloacid dehalogenase-like hydrolase domain conta; | 97.62 | |
| 3nvb_A | 387 | Uncharacterized protein; protein FKBH, protein fkb | 97.45 | |
| 3ocu_A | 262 | Lipoprotein E; hydrolase, outer membrane; HET: NMN | 97.44 | |
| 3pct_A | 260 | Class C acid phosphatase; hydrolase, outer membran | 97.42 | |
| 1vjr_A | 271 | 4-nitrophenylphosphatase; TM1742, structural genom | 97.41 | |
| 3vay_A | 230 | HAD-superfamily hydrolase; rossmann fold, haloacid | 97.39 | |
| 2x4d_A | 271 | HLHPP, phospholysine phosphohistidine inorganic py | 97.37 | |
| 1qyi_A | 384 | ZR25, hypothetical protein; structural genomics, P | 97.36 | |
| 4gib_A | 250 | Beta-phosphoglucomutase; rossmann fold, HAD-like, | 97.35 | |
| 4g9b_A | 243 | Beta-PGM, beta-phosphoglucomutase; HAD, putative p | 97.32 | |
| 1ltq_A | 301 | Polynucleotide kinase; phosphatase, alpha/beta, P- | 97.29 | |
| 2oda_A | 196 | Hypothetical protein pspto_2114; haloacid dehaloge | 97.22 | |
| 2zg6_A | 220 | Putative uncharacterized protein ST2620, probable | 97.21 | |
| 2fpr_A | 176 | Histidine biosynthesis bifunctional protein HISB; | 97.21 | |
| 1yns_A | 261 | E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo | 97.16 | |
| 3epr_A | 264 | Hydrolase, haloacid dehalogenase-like family; stru | 97.12 | |
| 2fue_A | 262 | PMM 1, PMMH-22, phosphomannomutase 1; enzyme-produ | 97.0 | |
| 2c4n_A | 250 | Protein NAGD; nucleotide phosphatase, HAD superfam | 96.96 | |
| 2kmv_A | 185 | Copper-transporting ATPase 1; menkes, nucleotide b | 96.88 | |
| 2i33_A | 258 | Acid phosphatase; HAD superfamily, hydrolase; 1.57 | 96.87 | |
| 4as2_A | 327 | Phosphorylcholine phosphatase; hydrolase, HAD supe | 96.65 | |
| 2amy_A | 246 | PMM 2, phosphomannomutase 2; HS.459855, HS.313504, | 96.62 | |
| 2ho4_A | 259 | Haloacid dehalogenase-like hydrolase domain contai | 96.34 | |
| 2p11_A | 231 | Hypothetical protein; putative haloacid dehalogena | 96.22 | |
| 3i28_A | 555 | Epoxide hydrolase 2; aromatic hydrocarbons catabol | 96.05 | |
| 2oyc_A | 306 | PLP phosphatase, pyridoxal phosphate phosphatase; | 95.98 | |
| 2obb_A | 142 | Hypothetical protein; structural genomics, PSI-2, | 95.68 | |
| 2b82_A | 211 | APHA, class B acid phosphatase; DDDD acid phosphat | 95.66 | |
| 3zvl_A | 416 | Bifunctional polynucleotide phosphatase/kinase; hy | 95.07 | |
| 2g80_A | 253 | Protein UTR4; YEL038W, UTR4 protein (unknown trans | 94.45 | |
| 1yv9_A | 264 | Hydrolase, haloacid dehalogenase family; hypotheti | 94.12 | |
| 2i7d_A | 193 | 5'(3')-deoxyribonucleotidase, cytosolic type; hydr | 94.05 | |
| 2arf_A | 165 | Wilson disease ATPase; P-type ATPase,ATP7B, copper | 93.67 | |
| 2hhl_A | 195 | CTD small phosphatase-like protein; CTD phosphatas | 90.43 | |
| 2ght_A | 181 | Carboxy-terminal domain RNA polymerase II polypept | 89.88 | |
| 2hx1_A | 284 | Predicted sugar phosphatases of the HAD superfamil | 89.08 | |
| 1xpj_A | 126 | Hypothetical protein; structural genomics, MCSG, p | 88.75 | |
| 3bwv_A | 180 | Putative 5'(3')-deoxyribonucleotidase; NP_764060.1 | 85.97 | |
| 2fue_A | 262 | PMM 1, PMMH-22, phosphomannomutase 1; enzyme-produ | 84.84 | |
| 2amy_A | 246 | PMM 2, phosphomannomutase 2; HS.459855, HS.313504, | 83.95 | |
| 2jc9_A | 555 | Cytosolic purine 5'-nucleotidase; cytosolic 5-prim | 83.93 | |
| 1zjj_A | 263 | Hypothetical protein PH1952; alpha/beta hydrolase | 83.83 | |
| 1zjj_A | 263 | Hypothetical protein PH1952; alpha/beta hydrolase | 83.0 | |
| 3n28_A | 335 | Phosphoserine phosphatase; HAD family hydrolase, s | 82.3 |
| >3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2yn9_A 2xzb_A 1iwc_A 1iwf_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.2e-87 Score=762.01 Aligned_cols=542 Identities=31% Similarity=0.460 Sum_probs=453.0
Q ss_pred chhhHHHHHHHHHHHHHHHhc---cCeeEEEECCEEEEeecCCcccCcEEEeCCCCeeeceEEEEeeCceEEEeccCcCC
Q 044020 2 VTAISDYKQSLQFRDLDREKK---KIFIQVTRDGQRQKVCTYDLVVGDIVHLSIGDQVPAYGIFISGHSLLIDESSLSGQ 78 (563)
Q Consensus 2 ~~~~~~~~~~~~~~~l~~~~~---~~~~~V~r~g~~~~i~~~~L~~GDiI~v~~G~~iPaD~~ll~g~~l~Vdes~lTGe 78 (563)
++++..|+++++.++..+.++ +.+++|+|||++++|++++|||||||.|++||+|||||+|++++++.||||+||||
T Consensus 152 i~~~~~~~qe~ka~~al~~L~~l~~~~a~ViRdG~~~~I~~~eLv~GDiV~l~~Gd~VPAD~~ll~~~~l~VdES~LTGE 231 (1034)
T 3ixz_A 152 VTGCFGYYQEFKSTNIIASFKNLVPQQATVIRDGDKFQINADQLVVGDLVEMKGGDRVPADIRILQAQGRKVDNSSLTGE 231 (1034)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccCCCeeEEEECCEEEEEEHHHCCCCcEEEEcCCceecCCeEEEEeCCceEEecccCCC
Confidence 566677777777766554433 45799999999999999999999999999999999999999998889999999999
Q ss_pred CCcccccCC---------CCeEEecceeecCcEEEEEEEEcccchhHHHHHHhccCCCCCCchHHHHHHHHHHHHHHHHH
Q 044020 79 SEPRYMYEE---------NPFLLAGTKVQGGSGKMLVTTVGMRTEWGKLMETLNEGGEDETPLQVKLNGVATIIGKIELF 149 (563)
Q Consensus 79 s~p~~k~~~---------~~~i~~Gt~v~~g~~~~~V~~tg~~t~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 149 (563)
|.|+.|..+ .+++|+||.+.+|.+.++|++||.+|.+|++.+++...+.+++|+++.++++..++..++++
T Consensus 232 S~pv~K~~~~~~~~~~~~~n~~f~GT~v~~G~~~~vVv~tG~~T~~GkI~~~~~~~~~~~tpl~~~~~~~~~~l~~~~~~ 311 (1034)
T 3ixz_A 232 SEPQTRSPECTHESPLETRNIAFFSTMCLEGTAQGLVVNTGDRTIIGRIASLASGVENEKTPIAIEIEHFVDIIAGLAIL 311 (1034)
T ss_pred CCCeeccCCCccccccccccceecceeEEeecceEEEEeehhhhHhhHHHHhhcccccCCCcHHHHHHHHHHHHHHHHHH
Confidence 999999642 45799999999999999999999999999999999998999999999999999999888877
Q ss_pred HHHHHHHHHHHHHhhccccccccccccchhhHHHHHHHHHHHHhhhhccCCchHHHHHHHHHHHHHHHhhCCCeeecchh
Q 044020 150 FSVLEFLVLIGRFLGEKVIHNEFTDWSSADALTLIDYFAVVVTIIDVAVPEGLPLAVTLSLAFAMKKLMNDGALVRHLSA 229 (563)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ili~~~P~~l~~~~~~~~~~~~~~l~~~~i~~k~~~~ 229 (563)
+++++++++++.. ..+...|.+++++++++|||+||++++++++.+.++|+++|+++|++++
T Consensus 312 ~~~~~~~~~~~~~------------------~~~~~~~~~~i~l~v~~iPe~Lp~~vti~la~~~~rmak~~~lvr~l~a 373 (1034)
T 3ixz_A 312 FGATFFIVAMCIG------------------YTFLRAMVFFMAIVVAYVPEGLLATVTVCLSLTAKRLASKNCVVKNLEA 373 (1034)
T ss_pred HHHHHHHHHHHhc------------------chHHHHHHHHHHHHHheeccccHHHHHHHHHHHHHHHhhCCeEecChHH
Confidence 7776666543211 1456778889999999999999999999999999999999999999999
Q ss_pred hhhcCCeeeeecccccccccCceEEEEEEEcCeeeeecCCCccccccccccHHHHHHHHHHHHhccCCceeecCCC----
Q 044020 230 CETMGSASCICTDKTRMLTTNHMVVDKIWIANTISNVEGNNRKDILQSEISERVLDITLQAIFQNTGSKVVKDKDG---- 305 (563)
Q Consensus 230 le~l~~v~~i~~DKTGTLT~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 305 (563)
+|+||++++||||||||||+|+|.|.+++..+..+......................+...+..|+.+......+.
T Consensus 374 vE~LG~v~~IcsDKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~lc~~a~~~~~~~~~~~~ 453 (1034)
T 3ixz_A 374 VETLGSTSVICSDKTGTLTQNRMTVSHLWFDNHIHSADTTEDQSGQTFDQSSETWRALCRVLTLCNRAAFKSGQDAVPVP 453 (1034)
T ss_pred HHhhcCCcEEEcCCCCCcccCeEEEEEEEECCccccccCcccccccccCcCCHHHHHHHHHHHHhccceeccCcCCCccc
Confidence 9999999999999999999999999999988776543322111110111112233344445555555544322221
Q ss_pred CceecCCccHHHHHHHHHHcCCChHHHhhhceEEEEecCCCCceeEEEEEEcCC---CeEEEEEeCChhHHHhccccccc
Q 044020 306 KNSILGTPTESAILEFGLRLGGDFEAQRREFKIVKVEPFNSVRKKMSVLIALPA---GGMRAFCKGASEIVLSMCDKVVS 382 (563)
Q Consensus 306 ~~~~~~~~~e~al~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~sviv~~~~---~~~~~~~kG~~~~il~~c~~~~~ 382 (563)
.....|+|+|.|+++++...+.+....+..++.+..+||+++||+|++++...+ +.+.+++||+||.++++|+.+..
T Consensus 454 ~~~~~gdp~e~All~~~~~~~~~~~~~~~~~~~~~~~pF~s~rk~m~~v~~~~~~~~~~~~l~~KGApe~il~~c~~~~~ 533 (1034)
T 3ixz_A 454 KRIVIGDASETALLKFSELTLGNAMGYRERFPKVCEIPFNSTNKFQLSIHTLEDPRDPRHVLVMKGAPERVLERCSSILI 533 (1034)
T ss_pred CceeccCchHHHHHHHHHHhCCChHHHHHhCcceEEeeecCCCceEEEEEEecCCCCccEEEEEeCChHHHHHHhHHhhc
Confidence 345779999999999999988888888899999999999999999988877543 67899999999999999998764
Q ss_pred CCCccccCCHHHHHHHHHHHHHHHHHHHhHhHhhhhccCCCCC---------CCCCCCCCceEEEEecccCCCCcchHHH
Q 044020 383 DNGEPVPLSEEQFRNITDVINGFASEALRTLCLAFKDLNDSSN---------ENNIPDSGYTLIAVVGIKDPVRPGVKEA 453 (563)
Q Consensus 383 ~~~~~~~~~~~~~~~i~~~~~~~~~~G~r~i~~a~~~l~~~~~---------~~~~~~~~~~~lG~i~~~d~~~~~~~~~ 453 (563)
+|...+++++.++.+.+.++.++.+|+||+++|++.++..+. ..+..|.|++|+|+++++|++|++++++
T Consensus 534 -~~~~~~l~~~~~~~~~~~~~~~a~~G~RvLa~A~~~l~~~~~~~~~~~~~~~~~~~e~~l~~lGlv~i~Dp~r~~~~~a 612 (1034)
T 3ixz_A 534 -KGQELPLDEQWREAFQTAYLSLGGLGERVLGFCQLYLSEKDYPPGYAFDVEAMNFPTSGLSFAGLVSMIDPPRATVPDA 612 (1034)
T ss_pred -CCceecCCHHHHHHHHHHHHHHHhcCcHhheEeEEecChhhcccccccchhhhhccccCcEEEEEEeccCCCchhHHHH
Confidence 577889999999999999999999999999999999876432 1234688999999999999999999999
Q ss_pred HHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCC------------------------ceeechhhhcCCCC---CCC
Q 044020 454 VQTCLEAGITVRMVTGDNINTARAIAKECGILTSDG------------------------EAVEGPEFRNMSPA---DII 506 (563)
Q Consensus 454 I~~l~~~gi~v~i~TGd~~~~a~~~a~~lgi~~~~~------------------------~~~~g~~~~~~~~~---~~~ 506 (563)
|++|+++||+|+|+|||++.+|.++|+++|+...+. .+++|.++..+..+ +..
T Consensus 613 I~~l~~aGI~vvmiTGd~~~tA~~ia~~lgi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~l~~~~ 692 (1034)
T 3ixz_A 613 VLKCRTAGIRVIMVTGDHPITAKAIAASVGIISEGSETVEDIAARLRVPVDQVNRKDARACVINGMQLKDMDPSELVEAL 692 (1034)
T ss_pred HHHHHHcCCeEEEEeCCCHHHHHHHHHHcCCCCCCchHHHHHHHhhCccchhccccccceeEEecHhhhhCCHHHHHHHH
Confidence 999999999999999999999999999999975321 35666666555433 111
Q ss_pred --cceeEEEecChhhHHHHHHHHHHhcCCEEEEEcCCccCHHHHhhCCceEeecCCCCC
Q 044020 507 --PKLQVMARSLPSDKHTLVTQLRNTFGEVVAVTGDGTNDASALHEADIGLAMGIAGTE 563 (563)
Q Consensus 507 --~~~~v~~~~~p~~K~~~v~~l~~~~g~~v~~iGDg~ND~~~l~~a~vgiamg~~~~~ 563 (563)
.+..+|+|++|++|..+++.+++. |+.|+|+|||.||++||++||+|||||+||+|
T Consensus 693 ~~~~~~v~ar~~P~~K~~iv~~lq~~-g~~V~a~GDG~ND~~mLk~A~vGIAMg~ng~d 750 (1034)
T 3ixz_A 693 RTHPEMVFARTSPQQKLVIVESCQRL-GAIVAVTGDGVNDSPALKKADIGVAMGIAGSD 750 (1034)
T ss_pred HhCCceEEEecCHHHHHHHHHHHHHc-CCEEEEECCcHHhHHHHHHCCeeEEeCCccCH
Confidence 123489999999999999999997 99999999999999999999999999977763
|
| >2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A | Back alignment and structure |
|---|
Probab=100.00 E-value=7.3e-88 Score=766.92 Aligned_cols=542 Identities=30% Similarity=0.438 Sum_probs=447.5
Q ss_pred chhhHHHHHHHHHHHHHHH---hccCeeEEEECCEEEEeecCCcccCcEEEeCCCCeeeceEEEEeeCceEEEeccCcCC
Q 044020 2 VTAISDYKQSLQFRDLDRE---KKKIFIQVTRDGQRQKVCTYDLVVGDIVHLSIGDQVPAYGIFISGHSLLIDESSLSGQ 78 (563)
Q Consensus 2 ~~~~~~~~~~~~~~~l~~~---~~~~~~~V~r~g~~~~i~~~~L~~GDiI~v~~G~~iPaD~~ll~g~~l~Vdes~lTGe 78 (563)
++++.+|.++++.++..+. ..+..++|+|||++++|++++|+|||||.|++||+|||||+|++|++|.||||+||||
T Consensus 147 i~~~~~~~qe~ka~~~~~~L~~l~~~~a~V~Rdg~~~~I~~~~Lv~GDiV~l~~Gd~IPaD~~ll~g~~~~VdeS~LTGE 226 (1028)
T 2zxe_A 147 VTGCFSYYQEAKSSRIMDSFKNMVPQQALVIRDGEKSTINAEFVVAGDLVEVKGGDRIPADLRIISAHGCKVDNSSLTGE 226 (1028)
T ss_dssp HHHHHHHHHTCCCCCHHHHHHTTSCSEEEEEETTEEEEEEGGGCCTTCEEEEETTCBCCSEEEEEEEEEEEEECHHHHSC
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhCCCeeEEEECCEEEEEEHHHCCcCCEEEECCCCEeeceEEEEeeCcEEEEcCccCCC
Confidence 4566777777654433322 3467899999999999999999999999999999999999999998789999999999
Q ss_pred CCcccccCCC---------CeEEecceeecCcEEEEEEEEcccchhHHHHHHhccCCCCCCchHHHHHHHHHHHHHHHHH
Q 044020 79 SEPRYMYEEN---------PFLLAGTKVQGGSGKMLVTTVGMRTEWGKLMETLNEGGEDETPLQVKLNGVATIIGKIELF 149 (563)
Q Consensus 79 s~p~~k~~~~---------~~i~~Gt~v~~g~~~~~V~~tg~~t~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 149 (563)
|.|+.|..+. +++|+||.+.+|++.++|++||.+|.+|++.+++.+++.+++|+++.+++++.++..++++
T Consensus 227 S~pv~K~~~~~~~~~~~~~n~v~~GT~v~~G~~~~~V~~tG~~T~~g~i~~~~~~~~~~~t~lq~~~~~~~~~l~~~~l~ 306 (1028)
T 2zxe_A 227 SEPQTRSPEFSSENPLETRNIAFFSTNCVEGTARGVVVYTGDRTVMGRIATLASGLEVGRTPIAIEIEHFIHIITGVAVF 306 (1028)
T ss_dssp CSCEECCSSCCCSSTTTCSSEECTTCEEEEEEEEEEEEECGGGSHHHHHHHHHHHSCCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred CcceecccCCCCCCcccccceEEeCceEEcceEEEEEEEeccccHHHHHHHhccCCCCCCCcHHHHHHHHHHHHHHHHHH
Confidence 9999998553 4799999999999999999999999999999999999999999999999999999888887
Q ss_pred HHHHHHHHHHHHHhhccccccccccccchhhHHHHHHHHHHHHhhhhccCCchHHHHHHHHHHHHHHHhhCCCeeecchh
Q 044020 150 FSVLEFLVLIGRFLGEKVIHNEFTDWSSADALTLIDYFAVVVTIIDVAVPEGLPLAVTLSLAFAMKKLMNDGALVRHLSA 229 (563)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ili~~~P~~l~~~~~~~~~~~~~~l~~~~i~~k~~~~ 229 (563)
+++++++++++ .. . .+...+.+++++++++|||+||++++++++.+..+|+++|+++|++++
T Consensus 307 ~~~~~~~~~~~--~~--------~--------~~~~~~~~~i~llv~~iP~~Lp~~vti~l~~~~~~mak~~ilvk~~~a 368 (1028)
T 2zxe_A 307 LGVSFFILSLI--LG--------Y--------SWLEAVIFLIGIIVANVPEGLLATVTVCLTLTAKRMARKNCLVKNLEA 368 (1028)
T ss_dssp HHHHHHHHHHH--TT--------C--------CHHHHHHHHHHHHHHHSCTTHHHHHHHHHHHHHHHHHTTTEEESSTTH
T ss_pred HHHHHHHHHHH--cc--------C--------cHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHhhCCceeccchH
Confidence 77776665322 10 0 234567788889999999999999999999999999999999999999
Q ss_pred hhhcCCeeeeecccccccccCceEEEEEEEcCeeeeecCCCccccccccccHHHHHHHHHHHHhccCCceeecCCC----
Q 044020 230 CETMGSASCICTDKTRMLTTNHMVVDKIWIANTISNVEGNNRKDILQSEISERVLDITLQAIFQNTGSKVVKDKDG---- 305 (563)
Q Consensus 230 le~l~~v~~i~~DKTGTLT~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 305 (563)
+|+||++|+||||||||||+|+|+|.+++..+..+......................+..++..||.+.+......
T Consensus 369 vE~Lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~alc~~~~~~~~~~~hp~~ 448 (1028)
T 2zxe_A 369 VETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEADTTENQSGAAFDKTSATWSALSRIAALCNRAVFQAGQDNVPIL 448 (1028)
T ss_dssp HHHHHHCCEEEECCCCCCBCSSCEEEEEEETTEEEECCCCTTCCSCCCCSSCHHHHHHHHHHHHSCCCEECTTCTTSCGG
T ss_pred hhhhcCceEEeccCCCCCCCCeEEEEEEEECCeeeeccCCCCccccccccCCHHHHHHHHHHHhcCCCeeecCCCCCccc
Confidence 9999999999999999999999999999988765533211110000000112223344444555655544322111
Q ss_pred CceecCCccHHHHHHHHHHcCCChHHHhhhceEEEEecCCCCceeEEEEEEcC---CCeEEEEEeCChhHHHhccccccc
Q 044020 306 KNSILGTPTESAILEFGLRLGGDFEAQRREFKIVKVEPFNSVRKKMSVLIALP---AGGMRAFCKGASEIVLSMCDKVVS 382 (563)
Q Consensus 306 ~~~~~~~~~e~al~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~sviv~~~---~~~~~~~~kG~~~~il~~c~~~~~ 382 (563)
.....|+|+|.|+++++.+.+.+....+..++++..+||+++||||+++++.+ ++++++++||+|+.++++|+...
T Consensus 449 ~~~~~gdp~E~Al~~~a~~~~~~~~~~~~~~~~~~~~pF~s~rk~msvi~~~~~~~~~~~~~~~KGA~e~il~~c~~~~- 527 (1028)
T 2zxe_A 449 KRSVAGDASESALLKCIELCCGSVQGMRDRNPKIVEIPFNSTNKYQLSIHENEKSSESRYLLVMKGAPERILDRCSTIL- 527 (1028)
T ss_dssp GSCEESCHHHHHHHHHHHHHHSCHHHHHHHSCEEEEECCCTTTCEEEEEEECSCTTTCCEEEEEEECHHHHHTTEEEEC-
T ss_pred cceeCCCchHHHHHHHHHHhCCCHHHHHHhCceEEEeccCcccceEEEEEeccCCCCCcEEEEEeCCcHHHHHHhhhhh-
Confidence 23467899999999999987667777788899999999999999999999874 46789999999999999998764
Q ss_pred CCCccccCCHHHHHHHHHHHHHHHHHHHhHhHhhhhccCCCCCC---------CCCCCCCceEEEEecccCCCCcchHHH
Q 044020 383 DNGEPVPLSEEQFRNITDVINGFASEALRTLCLAFKDLNDSSNE---------NNIPDSGYTLIAVVGIKDPVRPGVKEA 453 (563)
Q Consensus 383 ~~~~~~~~~~~~~~~i~~~~~~~~~~G~r~i~~a~~~l~~~~~~---------~~~~~~~~~~lG~i~~~d~~~~~~~~~ 453 (563)
.+|...+++++.++.+.+..+.++++|+||+++|+|.++..++. ....|.|++|+|+++++|++|++++++
T Consensus 528 ~~g~~~~l~~~~~~~~~~~~~~~a~~G~RvL~~A~~~l~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~i~Dplr~~~~~a 607 (1028)
T 2zxe_A 528 LNGAEEPLKEDMKEAFQNAYLELGGLGERVLGFCHFALPEDKYNEGYPFDADEPNFPTTDLCFVGLMAMIDPPRAAVPDA 607 (1028)
T ss_dssp BTTBCCBCCHHHHHHHHHHHHHHHHTTCEEEEEEEEECCSTTSCTTCCCCTTTTCSCCSSEEEEEEEEEECCBCTTHHHH
T ss_pred cCCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEEEEecCccccccccccchhhhhhhhcCeEEEeeeccCCCCChhHHHH
Confidence 35788899999999999999999999999999999988654211 134578999999999999999999999
Q ss_pred HHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCC------------------------CceeechhhhcCCCC---CCC
Q 044020 454 VQTCLEAGITVRMVTGDNINTARAIAKECGILTSD------------------------GEAVEGPEFRNMSPA---DII 506 (563)
Q Consensus 454 I~~l~~~gi~v~i~TGd~~~~a~~~a~~lgi~~~~------------------------~~~~~g~~~~~~~~~---~~~ 506 (563)
|++|+++||+|+|+|||++.+|..+|+++||...+ ..+++|.++..+..+ ...
T Consensus 608 I~~l~~aGI~v~miTGD~~~tA~~ia~~lgi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vi~G~~l~~~~~~~l~~~~ 687 (1028)
T 2zxe_A 608 VGKCRSAGIKVIMVTGDHPITAKAIAKGVGIISEGNETIEDIAARLNIPIGQVNPRDAKACVVHGSDLKDLSTEVLDDIL 687 (1028)
T ss_dssp HHHHHHTTCEEEEECSSCHHHHHHHHHHHTSSCTTCCCHHHHHHHTTCCGGGSCGGGCCEEEEEHHHHTTCCHHHHHHHH
T ss_pred HHHHHHcCCEEEEECCCCHHHHHHHHHHcCCCCCCchhHHHHHhhcCcchhhccccccceEEEEcHHhhhCCHHHHHHHH
Confidence 99999999999999999999999999999997532 235667766655433 111
Q ss_pred cc--eeEEEecChhhHHHHHHHHHHhcCCEEEEEcCCccCHHHHhhCCceEeecCCCCC
Q 044020 507 PK--LQVMARSLPSDKHTLVTQLRNTFGEVVAVTGDGTNDASALHEADIGLAMGIAGTE 563 (563)
Q Consensus 507 ~~--~~v~~~~~p~~K~~~v~~l~~~~g~~v~~iGDg~ND~~~l~~a~vgiamg~~~~~ 563 (563)
.+ ..+|+|++|++|..+++.+++. |+.|+|+|||.||++||++||+|||||++|+|
T Consensus 688 ~~~~~~v~ar~~P~~K~~iV~~lq~~-g~~V~~iGDG~ND~paLk~AdvGIAmg~~gtd 745 (1028)
T 2zxe_A 688 HYHTEIVFARTSPQQKLIIVEGCQRQ-GAIVAVTGDGVNDSPALKKADIGVAMGISGSD 745 (1028)
T ss_dssp HHCSEEEEESCCHHHHHHHHHHHHHT-TCCEEEEECSGGGHHHHHHSSEEEEESSSCCH
T ss_pred hhCCcEEEEEcCHHHHHHHHHHHHhC-CCEEEEEcCCcchHHHHHhCCceEEeCCccCH
Confidence 12 2499999999999999999998 99999999999999999999999999966763
|
| >3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-83 Score=733.06 Aligned_cols=532 Identities=33% Similarity=0.485 Sum_probs=431.1
Q ss_pred hccCeeEEEECCE--EEEeecCCcccCcEEEeCCCCeeeceEEEEe--eCceEEEeccCcCCCCcccccCCC--------
Q 044020 21 KKKIFIQVTRDGQ--RQKVCTYDLVVGDIVHLSIGDQVPAYGIFIS--GHSLLIDESSLSGQSEPRYMYEEN-------- 88 (563)
Q Consensus 21 ~~~~~~~V~r~g~--~~~i~~~~L~~GDiI~v~~G~~iPaD~~ll~--g~~l~Vdes~lTGes~p~~k~~~~-------- 88 (563)
..+.+++|+|||. .++|++++|+|||||.|++||+|||||+|++ +..|.||||+|||||.|+.|..+.
T Consensus 123 ~~~~~a~V~R~g~~~~~~I~~~~lv~GDiV~l~~Gd~IPaD~~ll~~~s~~l~VdeS~LTGES~pv~K~~~~~~~~~~~~ 202 (995)
T 3ar4_A 123 YEPEMGKVYRADRKSVQRIKARDIVPGDIVEVAVGDKVPADIRILSIKSTTLRVDQSILTGESVSVIKHTEPVPDPRAVN 202 (995)
T ss_dssp GSCSEEEEEBTTCSSCEEEEGGGCCTTCEEEEETTCBCCSEEEEEEECSSCEEEECHHHHCCCSCEEECCSCCCCTTCCG
T ss_pred cCCCeEEEEeCCCceEEEEEHHHCCCCCEEEECCCCcccccEEEEEEeeceEEEEcccccCCCcceeccccccCCcccCc
Confidence 3567899999887 6999999999999999999999999999965 445899999999999999998652
Q ss_pred ----CeEEecceeecCcEEEEEEEEcccchhHHHHHHhccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 044020 89 ----PFLLAGTKVQGGSGKMLVTTVGMRTEWGKLMETLNEGGEDETPLQVKLNGVATIIGKIELFFSVLEFLVLIGRFLG 164 (563)
Q Consensus 89 ----~~i~~Gt~v~~g~~~~~V~~tg~~t~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 164 (563)
+++|+||.+.+|++.++|++||.+|.+|++.+.+.+++.+++|+++.+++++.++.+++++++++++++++..+ .
T Consensus 203 ~~~~~~v~~GT~v~~G~~~~~V~~tG~~T~~g~i~~~~~~~~~~~tplq~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 281 (995)
T 3ar4_A 203 QDKKNMLFSGTNIAAGKALGIVATTGVSTEIGKIRDQMAATEQDKTPLQQKLDEFGEQLSKVISLICVAVWLINIGHF-N 281 (995)
T ss_dssp GGCTTEECTTCEEEECEEEEEEEECGGGSHHHHHHHHHHTCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTGGGG-G
T ss_pred ccccceEecCCEEEcceEEEEEEEcCcchHHHHHHHHhhcCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-c
Confidence 68999999999999999999999999999999999999999999999999999998877666655444322111 0
Q ss_pred ccccccccccccchhhHHHHHHHHHHHHhhhhccCCchHHHHHHHHHHHHHHHhhCCCeeecchhhhhcCCeeeeecccc
Q 044020 165 EKVIHNEFTDWSSADALTLIDYFAVVVTIIDVAVPEGLPLAVTLSLAFAMKKLMNDGALVRHLSACETMGSASCICTDKT 244 (563)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~ili~~~P~~l~~~~~~~~~~~~~~l~~~~i~~k~~~~le~l~~v~~i~~DKT 244 (563)
. ......| ...+...|..++++++++|||+||++++++++.+..+|+++|+++|+++++|+||++|+||||||
T Consensus 282 ~---~~~~~~~----~~~~~~~~~~ai~l~v~aiP~~Lp~~vt~~la~~~~~ma~~~~lvr~~~~iE~Lg~v~~ic~DKT 354 (995)
T 3ar4_A 282 D---PVHGGSW----IRGAIYYFKIAVALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCTSVICSDKT 354 (995)
T ss_dssp S---CSSSSCH----HHHHHHHHHHHHHHHHHHSCTTHHHHHHHHHHHHHHHHHHTTEEESCTTHHHHHHTCCEEEEEST
T ss_pred c---ccccchH----HHHHHHHHHHHHHHHHHhcCcchHHHHHHHHHHHHHHhccCCcEeccchhhhhhcCceEEEecCC
Confidence 0 0000112 12345567788999999999999999999999999999999999999999999999999999999
Q ss_pred cccccCceEEEEEEEcCeeee---------ecCCC--cc-cccc-----ccccHHHHHHHHHHHHhccCCceeec-CCCC
Q 044020 245 RMLTTNHMVVDKIWIANTISN---------VEGNN--RK-DILQ-----SEISERVLDITLQAIFQNTGSKVVKD-KDGK 306 (563)
Q Consensus 245 GTLT~~~~~v~~i~~~~~~~~---------~~~~~--~~-~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 306 (563)
||||+|+|+|.+++..+..+. .+... +. .... .....+....+......|+...+..+ ..+.
T Consensus 355 GTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~alc~~~~~~~~~~~~~ 434 (995)
T 3ar4_A 355 GTLTTNQMSVCKMFIIDKVDGDFCSLNEFSITGSTYAPEGEVLKNDKPIRSGQFDGLVELATICALCNDSSLDFNETKGV 434 (995)
T ss_dssp TTTBCCCCEEEEEEEEEEEETTEEEEEEEEECCSSSSSCCCEEETTEECCGGGCHHHHHHHHHHHHSCCCEEEEETTTTE
T ss_pred CCcccCceEEEEEEecCcccCcccccceeeccCCCcCCccccccccccccccccHHHHHHHHHHHHcCCCcccccCCCCc
Confidence 999999999999987643211 11100 00 0000 00011223334444455555544332 2233
Q ss_pred ceecCCccHHHHHHHHHHcCC-Ch--H-------------HHhhhceEEEEecCCCCceeEEEEEEcCCC-----eEEEE
Q 044020 307 NSILGTPTESAILEFGLRLGG-DF--E-------------AQRREFKIVKVEPFNSVRKKMSVLIALPAG-----GMRAF 365 (563)
Q Consensus 307 ~~~~~~~~e~al~~~~~~~~~-~~--~-------------~~~~~~~~~~~~~f~~~~~~~sviv~~~~~-----~~~~~ 365 (563)
.+..|+|+|.|++.++++.|. +. . ..+..|++++.+||+++||||+++++.+++ ++.+|
T Consensus 435 ~~~~g~p~E~Al~~~a~~~g~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~pF~s~rk~msvi~~~~~g~~~~~~~~~~ 514 (995)
T 3ar4_A 435 YEKVGEATETALTTLVEKMNVFNTEVRNLSKVERANACNSVIRQLMKKEFTLEFSRDRKSMSVYCSPAKSSRAAVGNKMF 514 (995)
T ss_dssp EEEESCHHHHHHHHHHHHHCTTCCCCTTSCTTTSTTHHHHHHHHHEEEEEEEEEETTTTEEEEEEEESSCCSCSCCCEEE
T ss_pred eeecCCccHHHHHHHHHHcCCccccccccccccccccchhhhhhhCceEEEeecCCCCCeeEEEEecCCCCccccceEEE
Confidence 456699999999999988765 11 1 245679999999999999999999987655 68899
Q ss_pred EeCChhHHHhcccccccCCCccccCCHHHHHHHHHHHHHH--HHHHHhHhHhhhhccCCCCCCC--------CCCCCCce
Q 044020 366 CKGASEIVLSMCDKVVSDNGEPVPLSEEQFRNITDVINGF--ASEALRTLCLAFKDLNDSSNEN--------NIPDSGYT 435 (563)
Q Consensus 366 ~kG~~~~il~~c~~~~~~~~~~~~~~~~~~~~i~~~~~~~--~~~G~r~i~~a~~~l~~~~~~~--------~~~~~~~~ 435 (563)
+||+|+.|+++|+.+... +...+++++.++.+.+..+.+ +++|+||+++|||+++..+... ...|.|++
T Consensus 515 ~KGa~e~il~~c~~~~~~-~~~~~l~~~~~~~~~~~~~~~~~a~~GlRvLa~A~k~~~~~~~~~~~~~~~~~~~~e~~l~ 593 (995)
T 3ar4_A 515 VKGAPEGVIDRCNYVRVG-TTRVPMTGPVKEKILSVIKEWGTGRDTLRCLALATRDTPPKREEMVLDDSSRFMEYETDLT 593 (995)
T ss_dssp EEECHHHHHHTEEEEEET-TEEEECCHHHHHHHHHHHHHHHHSTTCCEEEEEEEESSCCCGGGCCTTCGGGHHHHTCSEE
T ss_pred EcCCHHHHHHhcchhhcC-CCcccCCHHHHHHHHHHHHHHHhhhccceEEEEEEEecCccccccccccchhhhhhccCcE
Confidence 999999999999876653 466789999999999999999 8999999999999886433211 12478999
Q ss_pred EEEEecccCCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCC----CceeechhhhcCCCC---CCCcc
Q 044020 436 LIAVVGIKDPVRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAKECGILTSD----GEAVEGPEFRNMSPA---DIIPK 508 (563)
Q Consensus 436 ~lG~i~~~d~~~~~~~~~I~~l~~~gi~v~i~TGd~~~~a~~~a~~lgi~~~~----~~~~~g~~~~~~~~~---~~~~~ 508 (563)
|+|+++++|++|++++++|+.|+++|++++|+|||+..+|.++|+++|+.... ..++.|.+++.+..+ +...+
T Consensus 594 ~lG~~~i~D~lr~~~~~~I~~l~~~Gi~v~miTGD~~~ta~~ia~~lgi~~~~~~i~~~~~~g~~~~~l~~~~~~~~~~~ 673 (995)
T 3ar4_A 594 FVGVVGMLDPPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGIFGENEEVADRAYTGREFDDLPLAEQREACRR 673 (995)
T ss_dssp EEEEEEEECCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHTSSCTTCCCTTTEEEHHHHHTSCHHHHHHHHHH
T ss_pred EEEEEeecCCCchhHHHHHHHHHHcCCEEEEECCCCHHHHHHHHHHcCcCCCCCcccceEEEchhhhhCCHHHHHHHHhh
Confidence 99999999999999999999999999999999999999999999999997643 468888888776554 34455
Q ss_pred eeEEEecChhhHHHHHHHHHHhcCCEEEEEcCCccCHHHHhhCCceEeecCCCCC
Q 044020 509 LQVMARSLPSDKHTLVTQLRNTFGEVVAVTGDGTNDASALHEADIGLAMGIAGTE 563 (563)
Q Consensus 509 ~~v~~~~~p~~K~~~v~~l~~~~g~~v~~iGDg~ND~~~l~~a~vgiamg~~~~~ 563 (563)
..+|+|++|++|..+++.++++ |+.|+|+|||.||++||++||+||||| +|++
T Consensus 674 ~~v~~r~~P~~K~~~v~~l~~~-g~~v~~~GDG~ND~~alk~Advgiamg-~g~~ 726 (995)
T 3ar4_A 674 ACCFARVEPSHKSKIVEYLQSY-DEITAMTGDGVNDAPALKKAEIGIAMG-SGTA 726 (995)
T ss_dssp CCEEESCCSSHHHHHHHHHHTT-TCCEEEEECSGGGHHHHHHSTEEEEET-TSCH
T ss_pred CcEEEEeCHHHHHHHHHHHHHC-CCEEEEEcCCchhHHHHHHCCeEEEeC-CCCH
Confidence 6799999999999999999998 999999999999999999999999999 8763
|
| >1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-84 Score=721.52 Aligned_cols=492 Identities=25% Similarity=0.410 Sum_probs=407.4
Q ss_pred hhhHHHHHHHHHHHHHHHhc---cCeeEEEECCEEEEeecCCcccCcEEEeCCCCeeeceEEEEeeCc-eEEEeccCcCC
Q 044020 3 TAISDYKQSLQFRDLDREKK---KIFIQVTRDGQRQKVCTYDLVVGDIVHLSIGDQVPAYGIFISGHS-LLIDESSLSGQ 78 (563)
Q Consensus 3 ~~~~~~~~~~~~~~l~~~~~---~~~~~V~r~g~~~~i~~~~L~~GDiI~v~~G~~iPaD~~ll~g~~-l~Vdes~lTGe 78 (563)
+++.++.++++.++..+.++ +.+++|+|||++++|++++|+|||+|.|++||+|||||+|++|++ +.||||+||||
T Consensus 154 ~~~i~~~qe~~a~~a~~~L~~l~~~~a~V~RdG~~~~I~~~eLv~GDiV~l~~Gd~VPaDg~ll~g~~~l~VDES~LTGE 233 (920)
T 1mhs_A 154 NAVVGFVQEFQAGSIVDELKKTLALKAVVLRDGTLKEIEAPEVVPGDILQVEEGTIIPADGRIVTDDAFLQVDQSALTGE 233 (920)
T ss_dssp HHHHHHHHHHHHHHHHHTTTTCCCSSCEEECSSSEEECCTTTSCTTSEEEECTTCBCSSEEEEEEESSCCEEBCTTTSSC
T ss_pred HHHHHHHHHHHHHHHHHHhhccCCCEEEEEECCEEEEEEHHHcCCCCEEEeCCCCccccceEEEecCceeeeeccccCCC
Confidence 44556666666555444433 457999999999999999999999999999999999999999985 89999999999
Q ss_pred CCcccccCCCCeEEecceeecCcEEEEEEEEcccchhHHHHHHhccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 044020 79 SEPRYMYEENPFLLAGTKVQGGSGKMLVTTVGMRTEWGKLMETLNEGGEDETPLQVKLNGVATIIGKIELFFSVLEFLVL 158 (563)
Q Consensus 79 s~p~~k~~~~~~i~~Gt~v~~g~~~~~V~~tg~~t~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 158 (563)
|.|+.|..++ .+|+||.+.+|++.++|++||.+|.+|++.+++..++.+++|+++.++++..++..+++++++++++.+
T Consensus 234 S~PV~K~~gd-~v~sGT~v~~G~~~~~V~~tG~~T~~g~I~~lv~~a~~~~~~l~~~~~~i~~~l~~~~~~~~~i~~~~~ 312 (920)
T 1mhs_A 234 SLAVDKHKGD-QVFASSAVKRGEAFVVITATGDNTFVGRAAALVNAASGGSGHFTEVLNGIGTILLILVIFTLLIVWVSS 312 (920)
T ss_dssp CCCEECCSSC-EECSCBCCSCCCEEEEEEECSTTCSTTTTTSSCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred CcceEecCCC-eeecCceEecceEEEEEEEeCCcCHHHHHHHHHhhcccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999998765 699999999999999999999999999999999988888999999999998887766554443322211
Q ss_pred HHHHhhccccccccccccchhhHHHHHHHHHHHHhhhhccCCchHHHHHHHHHHHHHHHhhCCCeeecchhhhhcCCeee
Q 044020 159 IGRFLGEKVIHNEFTDWSSADALTLIDYFAVVVTIIDVAVPEGLPLAVTLSLAFAMKKLMNDGALVRHLSACETMGSASC 238 (563)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ili~~~P~~l~~~~~~~~~~~~~~l~~~~i~~k~~~~le~l~~v~~ 238 (563)
++. ...+...|.+++++++++|||+||++++++++.+..+|+++|+++|+++++|.||++|+
T Consensus 313 ---~~~---------------~~~~~~~l~~av~llV~aiP~aLp~~vti~la~g~~~mak~~ilvk~~~aiE~Lg~v~v 374 (920)
T 1mhs_A 313 ---FYR---------------SNPIVQILEFTLAITIIGVPVGLPAVVTTTMAVGAAYLAKKKAIVQKLSAIESLAGVEI 374 (920)
T ss_dssp ---TTT---------------TCCHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHTTCCCCCTTTHHHHHTCCE
T ss_pred ---Hhc---------------CCcHHHHHHHHHHHHHHhCchhHHHHHHHHHHHHHHHHHhCCeEEecCchhhhhccCcE
Confidence 100 01356678889999999999999999999999999999999999999999999999999
Q ss_pred eecccccccccCceEEEEEEEcCeeeeecCCCccccccccccHHHHHHHHHHHHhccCCceeecCCCCceecCCccHHHH
Q 044020 239 ICTDKTRMLTTNHMVVDKIWIANTISNVEGNNRKDILQSEISERVLDITLQAIFQNTGSKVVKDKDGKNSILGTPTESAI 318 (563)
Q Consensus 239 i~~DKTGTLT~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~al 318 (563)
||||||||||+|+|.|.+++..+.. . .++ .+.. .+.|+... ...+||+|.|+
T Consensus 375 Ic~DKTGTLT~n~m~v~~~~~~~g~------~---------~~~---ll~~-a~l~~~~~---------~~~~~P~e~Al 426 (920)
T 1mhs_A 375 LCSDKTGTLTKNKLSLHDPYTVAGV------D---------PED---LMLT-ACLAASRK---------KKGIDAIDKAF 426 (920)
T ss_dssp EEEETBTTTBSSCSCCCCCBCCSCC------C---------CTH---HHHH-HHHSCCCS---------SCSCCSHHHHH
T ss_pred EEECCCCCccccceeEEEEeecCCC------C---------HHH---HHHH-HHHhcCCc---------ccCCChHHHHH
Confidence 9999999999999999987653321 0 011 2222 23332211 01149999999
Q ss_pred HHHHHHcCCChHHHhhhceEEEEecCCCCceeEEEEEEcCCCeEEEEEeCChhHHHhcccccccCCCccccCCHHHHHHH
Q 044020 319 LEFGLRLGGDFEAQRREFKIVKVEPFNSVRKKMSVLIALPAGGMRAFCKGASEIVLSMCDKVVSDNGEPVPLSEEQFRNI 398 (563)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~sviv~~~~~~~~~~~kG~~~~il~~c~~~~~~~~~~~~~~~~~~~~i 398 (563)
++++.+.+.. ......+++++.+||++.+|+|+++++.++++.++++||+|+.++++|+. ..+++++.++.+
T Consensus 427 ~~~~~~~~~~-~~~~~~~~~~~~~pF~s~~k~ms~iv~~~~g~~~~~~KGape~il~~c~~-------~~~~~~~~~~~~ 498 (920)
T 1mhs_A 427 LKSLKYYPRA-KSVLSKYKVLQFHPFDPVSKKVVAVVESPQGERITCVKGAPLFVLKTVEE-------DHPIPEEVDQAY 498 (920)
T ss_dssp HHHHHHSSSC-CGGGSCCCEEEEEEEETTTTEEEEEECCSSSSCEEEEEECHHHHHHHCCC-------SSCCCHHHHHHH
T ss_pred HHHHHhcccc-hhhccccceeEEeeccCCCCeEEEEEEeCCCcEEEEEeCCHHHHHHhccc-------cCCCCHHHHHHH
Confidence 9998876532 22345688999999999999999999877777789999999999999973 235788888889
Q ss_pred HHHHHHHHHHHHhHhHhhhhccCCCCCCCCCCCCCceEEEEecccCCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHH
Q 044020 399 TDVINGFASEALRTLCLAFKDLNDSSNENNIPDSGYTLIAVVGIKDPVRPGVKEAVQTCLEAGITVRMVTGDNINTARAI 478 (563)
Q Consensus 399 ~~~~~~~~~~G~r~i~~a~~~l~~~~~~~~~~~~~~~~lG~i~~~d~~~~~~~~~I~~l~~~gi~v~i~TGd~~~~a~~~ 478 (563)
.+..+.++++|+|++++|++. .|.+++|+|+++++|++||+++++|++|+++||+++|+|||++.+|.++
T Consensus 499 ~~~~~~~a~~G~RvL~vA~~~----------~e~~l~~lGli~i~Dp~R~ea~~aI~~l~~aGI~v~MiTGD~~~TA~aI 568 (920)
T 1mhs_A 499 KNKVAEFATRGFRSLGVARKR----------GEGSWEILGIMPCMDPPRHDTYKTVCEAKTLGLSIKMLTGDAVGIARET 568 (920)
T ss_dssp HHHHHHHHTSSCCCCEECCCS----------SSCSCCCCBBCCCCCCCCHHHHHHHHHHHHHTCEEEEEESSCHHHHHHH
T ss_pred HHHHHHHHhCCCEEEEEEEec----------cccccEEEEEEEEeccccccHHHHHHHHhhcCceEEEEcCCCHHHHHHH
Confidence 999999999999999999884 1467899999999999999999999999999999999999999999999
Q ss_pred HHHcCCCC----CCCceeechhhhcCCCC---CCCcceeEEEecChhhHHHHHHHHHHhcCCEEEEEcCCccCHHHHhhC
Q 044020 479 AKECGILT----SDGEAVEGPEFRNMSPA---DIIPKLQVMARSLPSDKHTLVTQLRNTFGEVVAVTGDGTNDASALHEA 551 (563)
Q Consensus 479 a~~lgi~~----~~~~~~~g~~~~~~~~~---~~~~~~~v~~~~~p~~K~~~v~~l~~~~g~~v~~iGDg~ND~~~l~~a 551 (563)
|+++||.. ....+++|. +.++.+ +...+..+|+|++|+||..+|+.+|+. |+.|+|+|||.||+|||++|
T Consensus 569 A~~lGI~~~~~~~~~~~~~g~--~~~~~~el~~~~~~~~V~arv~P~~K~~iV~~Lq~~-g~~Vam~GDGvNDapaLk~A 645 (920)
T 1mhs_A 569 SRQLGLGTNIYNAERLGLGGG--GDMPGSEVYDFVEAADGFAEVFPQHKYNVVEILQQR-GYLVAMTGDGVNDAPSLKKA 645 (920)
T ss_dssp HHHHTSSCSCCCSSSSSSCBC--CCGGGGGGGTTTTTTSCEESCCSTHHHHHHHHHHTT-TCCCEECCCCGGGHHHHHHS
T ss_pred HHHcCCCccccCccceeecCc--ccCCHHHHHHHHhhCeEEEEeCHHHHHHHHHHHHhC-CCeEEEEcCCcccHHHHHhC
Confidence 99999964 223344444 222222 455667799999999999999999998 99999999999999999999
Q ss_pred CceEeecCCCCC
Q 044020 552 DIGLAMGIAGTE 563 (563)
Q Consensus 552 ~vgiamg~~~~~ 563 (563)
|+||||| +|+|
T Consensus 646 dvGIAmg-~gtd 656 (920)
T 1mhs_A 646 DTGIAVE-GSSD 656 (920)
T ss_dssp SEEEEET-TSCH
T ss_pred CcCcccc-cccH
Confidence 9999999 8763
|
| >3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-83 Score=713.44 Aligned_cols=489 Identities=23% Similarity=0.379 Sum_probs=389.1
Q ss_pred HHHHHHHHHHHHHHhccCeeEEEECCEEEEeecCCcccCcEEEeCCCCeeeceEEEEeeCceEEEeccCcCCCCcccccC
Q 044020 7 DYKQSLQFRDLDREKKKIFIQVTRDGQRQKVCTYDLVVGDIVHLSIGDQVPAYGIFISGHSLLIDESSLSGQSEPRYMYE 86 (563)
Q Consensus 7 ~~~~~~~~~~l~~~~~~~~~~V~r~g~~~~i~~~~L~~GDiI~v~~G~~iPaD~~ll~g~~l~Vdes~lTGes~p~~k~~ 86 (563)
+++.++...++.+ ..+.+++|+|||++++|++++|+|||+|.|++||+|||||+|++|++|.||||+|||||.|+.|..
T Consensus 114 e~ka~~al~~L~~-~~~~~a~V~RdG~~~~I~~~~Lv~GDiV~l~~Gd~IPaDg~ll~g~~l~VdES~LTGES~Pv~K~~ 192 (885)
T 3b8c_A 114 ENNAGNAAAALMA-GLAPKTKVLRDGKWSEQEAAILVPGDIVSIKLGDIIPADARLLEGDPLKVDQSALTGESLPVTKHP 192 (885)
T ss_dssp TTTTTTHHHHTTT-SCSCCCCCCCSSCSCCCCTTTTCTTSBCCCCSSCCCSSCCCCCCSSCBCCCCCSTTCCSSCCCBSS
T ss_pred HHHHHHHHHHHhc-cCCCeEEEEECCEEEEEEHHHCCCCCEEEECCCCEEeeceEEEEcCcccccccccCCCCcceEecC
Confidence 3333333444433 246679999999999999999999999999999999999999999988899999999999999987
Q ss_pred CCCeEEecceeecCcEEEEEEEEcccchhHHHHHHhccCCCCCCchHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHhhc
Q 044020 87 ENPFLLAGTKVQGGSGKMLVTTVGMRTEWGKLMETLNEGGEDETPLQVKLNGVATIIGKIELF-FSVLEFLVLIGRFLGE 165 (563)
Q Consensus 87 ~~~~i~~Gt~v~~g~~~~~V~~tg~~t~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~~~~~~~~~~~~~ 165 (563)
++ .+|+||.+.+|++.++|++||.+|.+|++.+++.. +.+++|+++.+++++.++...+++ +++++++++ ++.
T Consensus 193 g~-~v~~GT~v~~G~~~~~V~~tG~~T~~g~i~~lv~~-~~~~~~lq~~~~~i~~~~~~~~~~~~~~~~~~~~---~~~- 266 (885)
T 3b8c_A 193 GQ-EVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDS-TNQVGHFQKVLTAIGNFCICSIAIGMVIEIIVMY---PIQ- 266 (885)
T ss_dssp CC-CCCSCCCCCSCCCCCBCCSCTTTTTSTTCCCSCCS-CSCCSTTTTTTHHHHHHHHHHHHHHHHHHSTTTT---TTT-
T ss_pred CC-ccccCeEEeeeEEEEEEEEcCcccHHHHHHHHHhc-ccccChHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHc-
Confidence 65 59999999999999999999999999999988776 678899999999988774332211 111111110 000
Q ss_pred cccccccccccchhhHHHHHHHHHHHHhhhhccCCchHHHHHHHHHHHHHHHhhCCCeeecchhhhhcCCeeeeeccccc
Q 044020 166 KVIHNEFTDWSSADALTLIDYFAVVVTIIDVAVPEGLPLAVTLSLAFAMKKLMNDGALVRHLSACETMGSASCICTDKTR 245 (563)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~i~ili~~~P~~l~~~~~~~~~~~~~~l~~~~i~~k~~~~le~l~~v~~i~~DKTG 245 (563)
..+| ...+..++++++++|||+||++++++++.+..+|+++|+++|+++++|+||++|+|||||||
T Consensus 267 ------~~~~--------~~~~~~~v~llv~aiP~aLp~~vti~la~g~~r~ak~~ilvk~~~aiE~Lg~v~~Ic~DKTG 332 (885)
T 3b8c_A 267 ------RRKY--------RDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTG 332 (885)
T ss_dssp ------CSCS--------TTHHHHHHHHTTTTCCSSTTTHHHHTTTHHHHHHTTTSCCCSSGGGHHHHTTCCCCEEECCC
T ss_pred ------cCcH--------HHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHhCCeEeCCchHHHHHhCCCEEEECCCC
Confidence 0112 23567889999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCceEEEEEEEcCeeeeecCCCccccccccccHHHHHHHHHHHHhccCCceeecCCCCceecCCccHHHHHHHHHHc
Q 044020 246 MLTTNHMVVDKIWIANTISNVEGNNRKDILQSEISERVLDITLQAIFQNTGSKVVKDKDGKNSILGTPTESAILEFGLRL 325 (563)
Q Consensus 246 TLT~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~al~~~~~~~ 325 (563)
|||+|+|+|.+.+.. .+. . ..+. .+.+..+.+++.. ..+||+|.|+++++.+.
T Consensus 333 TLT~n~m~v~~~~~~--~~~----~-------~~~~--~~ll~~aa~~~~~------------~~~~p~~~Al~~~~~~~ 385 (885)
T 3b8c_A 333 TLTLNKLSVDKNLVE--VFC----K-------GVEK--DQVLLFAAMASRV------------ENQDAIDAAMVGMLADP 385 (885)
T ss_dssp CCSCCCCCCCSCCCC--SSC----S-------STTH--HHHHHHHHHHCCS------------SSCCSHHHHHHHTTCCT
T ss_pred CcccCceEEEEEEEe--ccC----C-------CCCH--HHHHHHHHHHhCC------------CCCCchHHHHHHHhhch
Confidence 999999999642210 000 0 0011 1223333333321 13699999999876431
Q ss_pred CCChHHHhhhceEEEEecCCCCceeEEEEEEcCCCeEEEEEeCChhHHHhcccccccCCCccccCCHHHHHHHHHHHHHH
Q 044020 326 GGDFEAQRREFKIVKVEPFNSVRKKMSVLIALPAGGMRAFCKGASEIVLSMCDKVVSDNGEPVPLSEEQFRNITDVINGF 405 (563)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~f~~~~~~~sviv~~~~~~~~~~~kG~~~~il~~c~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 405 (563)
...+..++.++.+||++.+++|+++++..++++++++||+|+.++++|+. +++.++.+.+.++.+
T Consensus 386 ----~~~~~~~~~~~~~pF~s~~k~~sv~~~~~~g~~~~~~KGa~e~il~~c~~-----------~~~~~~~~~~~~~~~ 450 (885)
T 3b8c_A 386 ----KEARAGIREVHFLPFNPVDKRTALTYIDGSGNWHRVSKGAPEQILELAKA-----------SNDLSKKVLSIIDKY 450 (885)
T ss_dssp ----TCCCCSSCCBCCCCCCTTTCCCCCBBCSSSSCBCBCCCCSGGGTSSSSCC-----------CSTTTTTHHHHHHHH
T ss_pred ----hhHhhcCceeecccCCcccceEEEEEEecCCcEEEEEeCCHHHHHHhccC-----------chhhHHHHHHHHHHH
Confidence 12234577888999999999999988766677788999999999999962 111223466778889
Q ss_pred HHHHHhHhHhhhhccCCCCCCCCCCCCCceEEEEecccCCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCC
Q 044020 406 ASEALRTLCLAFKDLNDSSNENNIPDSGYTLIAVVGIKDPVRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAKECGIL 485 (563)
Q Consensus 406 ~~~G~r~i~~a~~~l~~~~~~~~~~~~~~~~lG~i~~~d~~~~~~~~~I~~l~~~gi~v~i~TGd~~~~a~~~a~~lgi~ 485 (563)
+++|+|++++|+++++... ....+.+++|+|+++++|++||+++++|++|+++||+++|+|||+..+|.++|+++|+.
T Consensus 451 a~~G~rvl~vA~~~~~~~~--~~~~e~~l~~lGli~i~Dp~R~~a~~aI~~l~~aGI~v~MiTGD~~~tA~~iA~~lGi~ 528 (885)
T 3b8c_A 451 AERGLRSLAVARQVVPEKT--KESPGAPWEFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMG 528 (885)
T ss_dssp TTTTCEEEEECCBCCCSSS--SSCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHTTCCCEEEESSCHHHHTHHHHTTTCT
T ss_pred HhCCCeEEEEEEecccccc--ccccccCcEEEEEEEeecccchhHHHHHHHHHHcCCcEEEEcCCChHHHHHHHHHhCCc
Confidence 9999999999999887543 23567889999999999999999999999999999999999999999999999999996
Q ss_pred CC--CCceeechhhhc-CCCC---CCCcceeEEEecChhhHHHHHHHHHHhcCCEEEEEcCCccCHHHHhhCCceEeecC
Q 044020 486 TS--DGEAVEGPEFRN-MSPA---DIIPKLQVMARSLPSDKHTLVTQLRNTFGEVVAVTGDGTNDASALHEADIGLAMGI 559 (563)
Q Consensus 486 ~~--~~~~~~g~~~~~-~~~~---~~~~~~~v~~~~~p~~K~~~v~~l~~~~g~~v~~iGDg~ND~~~l~~a~vgiamg~ 559 (563)
.. ...++.|.+++. +... +...+..+|++++|+||..+|+.+|++ |+.|+|+|||.||+|||++||+|||||
T Consensus 529 ~~~~~~~~l~g~~~~~~~~~~~l~~~~~~~~v~arv~P~~K~~iV~~lq~~-g~~Vam~GDGvNDapaLk~AdvGIAmg- 606 (885)
T 3b8c_A 529 TNMYPSSALLGTHKDANLASIPVEELIEKADGFAGVFPEHKYEIVKKLQER-KHIVGMTGDGVNDAPALKKADIGIAVA- 606 (885)
T ss_dssp TCCSTTSSCCBGGGGTTSCCSCHHHHHHTSCCEECCCHHHHHHHHHHHHHT-TCCCCBCCCSSTTHHHHHHSSSCCCCS-
T ss_pred cccCCcceeeccccccccchhHHHHHHhhCcEEEEECHHHHHHHHHHHHHC-CCeEEEEcCCchhHHHHHhCCEeEEeC-
Confidence 42 234566766654 3322 334456799999999999999999998 999999999999999999999999999
Q ss_pred CCC
Q 044020 560 AGT 562 (563)
Q Consensus 560 ~~~ 562 (563)
+|+
T Consensus 607 ~gt 609 (885)
T 3b8c_A 607 DAT 609 (885)
T ss_dssp SSH
T ss_pred Ccc
Confidence 775
|
| >3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.8e-74 Score=624.62 Aligned_cols=443 Identities=24% Similarity=0.348 Sum_probs=369.8
Q ss_pred chhhHHHHHHHHHHHHH----HH--hccCeeEEEE-CCEEEEeecCCcccCcEEEeCCCCeeeceEEEEeeCceEEEecc
Q 044020 2 VTAISDYKQSLQFRDLD----RE--KKKIFIQVTR-DGQRQKVCTYDLVVGDIVHLSIGDQVPAYGIFISGHSLLIDESS 74 (563)
Q Consensus 2 ~~~~~~~~~~~~~~~l~----~~--~~~~~~~V~r-~g~~~~i~~~~L~~GDiI~v~~G~~iPaD~~ll~g~~l~Vdes~ 74 (563)
+..+.+|.+.+++++.. +. +.+.+++|+| ||++++|++++|+|||+|.|++||+|||||+|++|++ .||||+
T Consensus 197 ~~llg~~le~~a~~~~~~ai~~L~~l~p~~a~vv~~dg~~~~v~~~~l~~GDiv~v~~Ge~IPaDg~vl~G~~-~VDES~ 275 (736)
T 3rfu_A 197 LVLLGQVLELKAREQTGSAIRALLKLVPESAHRIKEDGSEEEVSLDNVAVGDLLRVRPGEKIPVDGEVQEGRS-FVDESM 275 (736)
T ss_dssp HHHHHHHHHHHHHCCCSSHHHHHTCCCCCEEEEEETTEEEEEEETTTCCTTCEECCCSSEECCSCEEECSSCE-EEECSS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEecCCEEEEEEHhhCCCCCEEEECCCCcccccEEEEECce-Eeeecc
Confidence 34556666666654322 21 3456788887 9999999999999999999999999999999999987 899999
Q ss_pred CcCCCCcccccCCCCeEEecceeecCcEEEEEEEEcccchhHHHHHHhccCCCCCCchHHHHHHHHHHHHHHHHHHHHHH
Q 044020 75 LSGQSEPRYMYEENPFLLAGTKVQGGSGKMLVTTVGMRTEWGKLMETLNEGGEDETPLQVKLNGVATIIGKIELFFSVLE 154 (563)
Q Consensus 75 lTGes~p~~k~~~~~~i~~Gt~v~~g~~~~~V~~tg~~t~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 154 (563)
|||||.|+.|..++. +|+||.+.+|++.++|+++|.+|.++++.+++.+++.+++|+++.+++++.++.++++++++++
T Consensus 276 LTGES~Pv~K~~gd~-v~~Gt~~~~G~~~~~v~~~G~~T~l~~I~~lv~~a~~~k~~~q~~~d~~a~~~v~~vl~ia~~~ 354 (736)
T 3rfu_A 276 VTGEPIPVAKEASAK-VIGATINQTGSFVMKALHVGSDTMLARIVQMVSDAQRSRAPIQRLADTVSGWFVPAVILVAVLS 354 (736)
T ss_dssp STTCSSCEEECTTCE-ECTTCEEESCCCCEEECCCSTTSHHHHHHHHHHHHHSSCCCCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCccccEEeccCCc-CCCceEeccceEEEEEEEechhhHHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999987765 9999999999999999999999999999999999999999999999999999999999999998
Q ss_pred HHHHHHHHhhccccccccccccchhhHHHHHHHHHHHHhhhhccCCchHHHHHHHHHHHHHHHhhCCCeeecchhhhhcC
Q 044020 155 FLVLIGRFLGEKVIHNEFTDWSSADALTLIDYFAVVVTIIDVAVPEGLPLAVTLSLAFAMKKLMNDGALVRHLSACETMG 234 (563)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ili~~~P~~l~~~~~~~~~~~~~~l~~~~i~~k~~~~le~l~ 234 (563)
+++|++... .. .+...+..++++++++|||+|++++|+++..+..+++++|+++|+++++|.||
T Consensus 355 ~~~w~~~~~--------~~--------~~~~~l~~ai~vlviacPcaL~la~p~a~~~~~~~~a~~gilvk~~~alE~l~ 418 (736)
T 3rfu_A 355 FIVWALLGP--------QP--------ALSYGLIAAVSVLIIACPCALGLATPMSIMVGVGKGAQSGVLIKNAEALERME 418 (736)
T ss_dssp HHHHHHHCS--------SS--------STTHHHHHHHHHHHHHCCSTHHHHHHHHHHHHHHHHHHTTEEESCHHHHHHHT
T ss_pred HHHHHHhCC--------Cc--------hHHHHHHHHHHhHHHhhhhHHHHHHHHHHHHHHHHHhhcceeechHHHHHHhc
Confidence 887754210 00 13446788999999999999999999999999999999999999999999999
Q ss_pred CeeeeecccccccccCceEEEEEEEcCeeeeecCCCccccccccccHHHHHHHHHHHHhccCCceeecCCCCceecCCcc
Q 044020 235 SASCICTDKTRMLTTNHMVVDKIWIANTISNVEGNNRKDILQSEISERVLDITLQAIFQNTGSKVVKDKDGKNSILGTPT 314 (563)
Q Consensus 235 ~v~~i~~DKTGTLT~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (563)
++|+||||||||||+|+|.|.+++..+.. .++.+.+ +...+. .+.||.
T Consensus 419 ~v~~i~fDKTGTLT~g~~~v~~i~~~~~~----------------~~~~l~~---aa~le~-------------~s~hPl 466 (736)
T 3rfu_A 419 KVNTLVVDKTGTLTEGHPKLTRIVTDDFV----------------EDNALAL---AAALEH-------------QSEHPL 466 (736)
T ss_dssp SCCEEEECCBTTTBCSSCEEEEEEESSSC----------------HHHHHHH---HHHHHH-------------SSCCHH
T ss_pred CCCEEEEeCCCCCcCCceEEEEEEecCCC----------------HHHHHHH---HHHHhh-------------cCCChH
Confidence 99999999999999999999998732210 1222222 222221 235999
Q ss_pred HHHHHHHHHHcCCChHHHhhhceEEEEecCCCCceeEEEEEEcCCCeEEEEEeCChhHHHhcccccccCCCccccCCHHH
Q 044020 315 ESAILEFGLRLGGDFEAQRREFKIVKVEPFNSVRKKMSVLIALPAGGMRAFCKGASEIVLSMCDKVVSDNGEPVPLSEEQ 394 (563)
Q Consensus 315 e~al~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~sviv~~~~~~~~~~~kG~~~~il~~c~~~~~~~~~~~~~~~~~ 394 (563)
+.|+++++++.+... ....+|++..++. +....++.. +..|+++.+.+.+.. .
T Consensus 467 a~Aiv~~a~~~~~~~---------~~~~~f~~~~g~g-v~~~~~g~~---~~~G~~~~~~~~~~~----------~---- 519 (736)
T 3rfu_A 467 ANAIVHAAKEKGLSL---------GSVEAFEAPTGKG-VVGQVDGHH---VAIGNARLMQEHGGD----------N---- 519 (736)
T ss_dssp HHHHHHHHHTTCCCC---------CCCSCCCCCTTTE-EEECSSSSC---EEEESHHHHHHHCCC----------C----
T ss_pred HHHHHHHHHhcCCCc---------cCcccccccCCce-EEEEECCEE---EEEcCHHHHHHcCCC----------h----
Confidence 999999998766432 2345677666553 222333333 346998877554321 0
Q ss_pred HHHHHHHHHHHHHHHHhHhHhhhhccCCCCCCCCCCCCCceEEEEecccCCCCcchHHHHHHHHhCCCeEEEEcCCCHHH
Q 044020 395 FRNITDVINGFASEALRTLCLAFKDLNDSSNENNIPDSGYTLIAVVGIKDPVRPGVKEAVQTCLEAGITVRMVTGDNINT 474 (563)
Q Consensus 395 ~~~i~~~~~~~~~~G~r~i~~a~~~l~~~~~~~~~~~~~~~~lG~i~~~d~~~~~~~~~I~~l~~~gi~v~i~TGd~~~~ 474 (563)
..+.+..+.+..+|+|++++|+ |.+++|+++++|++|++++++|++|+++|++++|+|||+..+
T Consensus 520 -~~~~~~~~~~~~~G~~vl~va~---------------d~~~~G~i~i~D~i~~~~~~aI~~L~~~Gi~v~mlTGd~~~~ 583 (736)
T 3rfu_A 520 -APLFEKADELRGKGASVMFMAV---------------DGKTVALLVVEDPIKSSTPETILELQQSGIEIVMLTGDSKRT 583 (736)
T ss_dssp -HHHHHHHHHHHHTTCEEEEEEE---------------TTEEEEEEEEECCBCSSHHHHHHHHHHHTCEEEEECSSCHHH
T ss_pred -hHHHHHHHHHHhcCCeEEEEEE---------------CCEEEEEEEeeccchhhHHHHHHHHHHCCCeEEEECCCCHHH
Confidence 2345667889999999999995 459999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCCCCceeechhhhcCCCCCCCcceeEEEecChhhHHHHHHHHHHhcCCEEEEEcCCccCHHHHhhCCce
Q 044020 475 ARAIAKECGILTSDGEAVEGPEFRNMSPADIIPKLQVMARSLPSDKHTLVTQLRNTFGEVVAVTGDGTNDASALHEADIG 554 (563)
Q Consensus 475 a~~~a~~lgi~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~~~~g~~v~~iGDg~ND~~~l~~a~vg 554 (563)
+..+++++|++. ++++++|++|.++++.++++ |+.|+|+|||.||++||++||+|
T Consensus 584 a~~ia~~lgi~~------------------------v~a~~~P~~K~~~v~~l~~~-g~~V~~vGDG~ND~paL~~AdvG 638 (736)
T 3rfu_A 584 AEAVAGTLGIKK------------------------VVAEIMPEDKSRIVSELKDK-GLIVAMAGDGVNDAPALAKADIG 638 (736)
T ss_dssp HHHHHHHHTCCC------------------------EECSCCHHHHHHHHHHHHHH-SCCEEEEECSSTTHHHHHHSSEE
T ss_pred HHHHHHHcCCCE------------------------EEEecCHHHHHHHHHHHHhc-CCEEEEEECChHhHHHHHhCCEE
Confidence 999999999987 99999999999999999998 99999999999999999999999
Q ss_pred EeecCCCCC
Q 044020 555 LAMGIAGTE 563 (563)
Q Consensus 555 iamg~~~~~ 563 (563)
|||| +|+|
T Consensus 639 IAmg-~g~d 646 (736)
T 3rfu_A 639 IAMG-TGTD 646 (736)
T ss_dssp EEES-SSCS
T ss_pred EEeC-CccH
Confidence 9999 8875
|
| >3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-70 Score=595.91 Aligned_cols=435 Identities=25% Similarity=0.353 Sum_probs=357.4
Q ss_pred hhhHHHHHHHHHHHH----HH--HhccCeeEEEECCEEEEeecCCcccCcEEEeCCCCeeeceEEEEeeCceEEEeccCc
Q 044020 3 TAISDYKQSLQFRDL----DR--EKKKIFIQVTRDGQRQKVCTYDLVVGDIVHLSIGDQVPAYGIFISGHSLLIDESSLS 76 (563)
Q Consensus 3 ~~~~~~~~~~~~~~l----~~--~~~~~~~~V~r~g~~~~i~~~~L~~GDiI~v~~G~~iPaD~~ll~g~~l~Vdes~lT 76 (563)
..+.+|.+.++.++. .+ ...+.+++|+|||++++|++++|+|||+|.|++||+|||||+|++|++ .||||+||
T Consensus 106 ~~ig~~le~~~~~~~~~~l~~l~~l~~~~a~v~r~g~~~~i~~~~l~~GDiv~v~~Ge~IPaDg~vl~G~~-~VdeS~LT 184 (645)
T 3j08_A 106 LLLGRTLEARAKSRTGEAIKKLVGLQAKTAVVIRDGKEIAVPVEEVAVGDIVIVRPGEKIPVDGVVVEGES-YVDESMIS 184 (645)
T ss_dssp HHHHHHHHHHHHCCCCCCCHHHHHTSCSEEEEEETTEEEEEEGGGCCTTCEEEECTTCBCCSEEEEEECCE-EEECHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCEEEEEEHHHCCCCCEEEECCCCEEeeEEEEEECcE-EEEccccc
Confidence 456677777765432 11 235678999999999999999999999999999999999999999986 89999999
Q ss_pred CCCCcccccCCCCeEEecceeecCcEEEEEEEEcccchhHHHHHHhccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHH
Q 044020 77 GQSEPRYMYEENPFLLAGTKVQGGSGKMLVTTVGMRTEWGKLMETLNEGGEDETPLQVKLNGVATIIGKIELFFSVLEFL 156 (563)
Q Consensus 77 Ges~p~~k~~~~~~i~~Gt~v~~g~~~~~V~~tg~~t~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 156 (563)
|||.|+.|..++. +|+||.+.+|.+.++|+++|.+|.++++.+.+.+++.+++|+++..++++.++.++++++++++++
T Consensus 185 GES~Pv~K~~g~~-v~~Gt~~~~g~~~~~v~~~G~~T~l~~i~~lv~~a~~~k~~~~~~~d~~~~~~~~~vl~~a~~~~~ 263 (645)
T 3j08_A 185 GEPVPVLKSKGDE-VFGATINNTGVLKIRATRVGGETLLAQIVKLVEDAMGSKPPIQRLADKVVAYFIPTVLLVAISAFI 263 (645)
T ss_dssp CCSSCEEECTTCE-ECTTCEECSSCEEEEEEECGGGSHHHHHHHHHSCCCCCCCSHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCceecCCCCE-eeccEEEecCcEEEEEEEcCCccHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999987665 999999999999999999999999999999999999999999999999999999888877777666
Q ss_pred HHHHHHhhccccccccccccchhhHHHHHHHHHHHHhhhhccCCchHHHHHHHHHHHHHHHhhCCCeeecchhhhhcCCe
Q 044020 157 VLIGRFLGEKVIHNEFTDWSSADALTLIDYFAVVVTIIDVAVPEGLPLAVTLSLAFAMKKLMNDGALVRHLSACETMGSA 236 (563)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ili~~~P~~l~~~~~~~~~~~~~~l~~~~i~~k~~~~le~l~~v 236 (563)
+|.+. . ..+ +...+..++++++++|||+|++++|+++..+..+++++|+++|+++++|.||++
T Consensus 264 ~~~~~--~-------~~~--------~~~~~~~~i~vlvia~P~aL~la~p~a~~~~~~~~a~~gilvk~~~~lE~lg~v 326 (645)
T 3j08_A 264 YWYFI--A-------HAP--------LLFAFTTLIAVLVVACPCAFGLATPTALTVGMGKGAELGILIKNADALEVAEKV 326 (645)
T ss_dssp CSSCC--C-------SCS--------CCCTTTTTHHHHHHHSCTTHHHHHHHHHHHHHHHHHTTCCCCSSTTHHHHGGGC
T ss_pred HHHHh--c-------CCc--------HHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHCCeEecCchHHHHhhCC
Confidence 54211 0 001 122356678899999999999999999999999999999999999999999999
Q ss_pred eeeecccccccccCceEEEEEEEcCeeeeecCCCccccccccccHHHHHHHHHHHHhccCCceeecCCCCceecCCccHH
Q 044020 237 SCICTDKTRMLTTNHMVVDKIWIANTISNVEGNNRKDILQSEISERVLDITLQAIFQNTGSKVVKDKDGKNSILGTPTES 316 (563)
Q Consensus 237 ~~i~~DKTGTLT~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~ 316 (563)
|++|||||||||+|+|.|.+++..+.. .++.+.+ +..++. .+.||.+.
T Consensus 327 ~~i~fDKTGTLT~~~~~v~~~~~~~~~----------------~~~~l~~---aa~~e~-------------~s~hPla~ 374 (645)
T 3j08_A 327 TAVIFDKTGTLTKGKPEVTDLVPLNGD----------------ERELLRL---AAIAER-------------RSEHPIAE 374 (645)
T ss_dssp CEEEEEGGGTSSSSCCEEEEEEESSSC----------------HHHHHHH---HHHHHT-------------TCCSHHHH
T ss_pred CEEEEcCcccccCCCeEEEEEEeCCCC----------------HHHHHHH---HHHHhh-------------cCCChhHH
Confidence 999999999999999999999875421 1222222 222221 22499999
Q ss_pred HHHHHHHHcCCChHHHhhhceEEEEecCCCCceeEEEEEEcCCCeEE--EEEeCChhHHHhcccccccCCCccccCCHHH
Q 044020 317 AILEFGLRLGGDFEAQRREFKIVKVEPFNSVRKKMSVLIALPAGGMR--AFCKGASEIVLSMCDKVVSDNGEPVPLSEEQ 394 (563)
Q Consensus 317 al~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~sviv~~~~~~~~--~~~kG~~~~il~~c~~~~~~~~~~~~~~~~~ 394 (563)
|+++++.+.+...... .+|++ .++.+.. .+..|+++.+.+... ...
T Consensus 375 Aiv~~a~~~g~~~~~~---------~~~~~----------~~g~g~~~~~v~~g~~~~~~~~~~----------~~~--- 422 (645)
T 3j08_A 375 AIVKKALEHGIELGEP---------EKVEV----------IAGEGVVADGILVGNKRLMEDFGV----------AVS--- 422 (645)
T ss_dssp HHHHHHHHTTCCCCSC---------CCCEE----------ETTTEEEETTEEEECHHHHHHTTC----------CCC---
T ss_pred HHHHHHHhcCCCcCCc---------cceEE----------ecCCceEEEEEEECCHHHHHhcCC----------Ccc---
Confidence 9999998877543211 11111 1222221 245677766643221 112
Q ss_pred HHHHHHHHHHHHHHHHhHhHhhhhccCCCCCCCCCCCCCceEEEEecccCCCCcchHHHHHHHHhCCCeEEEEcCCCHHH
Q 044020 395 FRNITDVINGFASEALRTLCLAFKDLNDSSNENNIPDSGYTLIAVVGIKDPVRPGVKEAVQTCLEAGITVRMVTGDNINT 474 (563)
Q Consensus 395 ~~~i~~~~~~~~~~G~r~i~~a~~~l~~~~~~~~~~~~~~~~lG~i~~~d~~~~~~~~~I~~l~~~gi~v~i~TGd~~~~ 474 (563)
+.+....+.+..+|+|++++|+ |++++|+++++|+++++++++|++|+++|++++|+|||+..+
T Consensus 423 -~~~~~~~~~~~~~g~~~l~va~---------------~~~~~G~i~~~D~l~~~~~~~i~~L~~~Gi~v~~~TGd~~~~ 486 (645)
T 3j08_A 423 -NEVELALEKLEREAKTAVIVAR---------------NGRVEGIIAVSDTLKESAKPAVQELKRMGIKVGMITGDNWRS 486 (645)
T ss_dssp -HHHHHHHHHHHTTTCCCEEEEE---------------TTEEEEEEEEECCCTTTHHHHHHHHHHTTCEEEEECSSCHHH
T ss_pred -HHHHHHHHHHHhcCCeEEEEEE---------------CCEEEEEEEecCCchhHHHHHHHHHHHCCCEEEEEeCCCHHH
Confidence 3456677888899999999885 459999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCCCCceeechhhhcCCCCCCCcceeEEEecChhhHHHHHHHHHHhcCCEEEEEcCCccCHHHHhhCCce
Q 044020 475 ARAIAKECGILTSDGEAVEGPEFRNMSPADIIPKLQVMARSLPSDKHTLVTQLRNTFGEVVAVTGDGTNDASALHEADIG 554 (563)
Q Consensus 475 a~~~a~~lgi~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~~~~g~~v~~iGDg~ND~~~l~~a~vg 554 (563)
+..+++++|++. +|+++.|++|.++++.++++ +.|+|+|||.||++||++||+|
T Consensus 487 a~~ia~~lgi~~------------------------~~~~~~P~~K~~~v~~l~~~--~~v~~vGDg~ND~~al~~A~vg 540 (645)
T 3j08_A 487 AEAISRELNLDL------------------------VIAEVLPHQKSEEVKKLQAK--EVVAFVGDGINDAPALAQADLG 540 (645)
T ss_dssp HHHHHHHHTCSE------------------------EECSCCTTCHHHHHHHHTTT--CCEEEEECSSSCHHHHHHSSEE
T ss_pred HHHHHHHcCCCE------------------------EEEeCCHHhHHHHHHHHhhC--CeEEEEeCCHhHHHHHHhCCEE
Confidence 999999999986 99999999999999999986 7899999999999999999999
Q ss_pred EeecCCCCC
Q 044020 555 LAMGIAGTE 563 (563)
Q Consensus 555 iamg~~~~~ 563 (563)
|||| +|++
T Consensus 541 iamg-~g~~ 548 (645)
T 3j08_A 541 IAVG-SGSD 548 (645)
T ss_dssp EEEC-CCSC
T ss_pred EEeC-CCcH
Confidence 9999 8864
|
| >3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.8e-71 Score=605.44 Aligned_cols=435 Identities=25% Similarity=0.351 Sum_probs=358.6
Q ss_pred hhhHHHHHHHHHHHH----HH--HhccCeeEEEECCEEEEeecCCcccCcEEEeCCCCeeeceEEEEeeCceEEEeccCc
Q 044020 3 TAISDYKQSLQFRDL----DR--EKKKIFIQVTRDGQRQKVCTYDLVVGDIVHLSIGDQVPAYGIFISGHSLLIDESSLS 76 (563)
Q Consensus 3 ~~~~~~~~~~~~~~l----~~--~~~~~~~~V~r~g~~~~i~~~~L~~GDiI~v~~G~~iPaD~~ll~g~~l~Vdes~lT 76 (563)
..+.+|.+.++.++. .+ ...+.+++|+|||++++|++++|+|||+|.|++||+|||||+|++|++ .||||+||
T Consensus 184 ~~ig~~le~~~~~~~~~~i~~l~~l~~~~a~v~r~g~~~~i~~~~l~~GDiv~v~~Ge~IPaDg~vl~G~~-~VdeS~LT 262 (723)
T 3j09_A 184 LLLGRTLEARAKSRTGEAIKKLVGLQAKTAVVIRDGKEIAVPVEEVAVGDIVIVRPGEKIPVDGVVVEGES-YVDESMIS 262 (723)
T ss_dssp HHHHHHHHHHHHTTCCCTTHHHHHTSCSEEEEEETTEEEEEEGGGCCTTCEEEECTTCBCCSEEEEEECCE-EEECHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCeeEEEECCEEEEEEHHHCCCCCEEEECCCCEEeeEEEEEECCe-EEeccccc
Confidence 456677777665432 22 235678999999999999999999999999999999999999999986 89999999
Q ss_pred CCCCcccccCCCCeEEecceeecCcEEEEEEEEcccchhHHHHHHhccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHH
Q 044020 77 GQSEPRYMYEENPFLLAGTKVQGGSGKMLVTTVGMRTEWGKLMETLNEGGEDETPLQVKLNGVATIIGKIELFFSVLEFL 156 (563)
Q Consensus 77 Ges~p~~k~~~~~~i~~Gt~v~~g~~~~~V~~tg~~t~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 156 (563)
|||.|+.|..++. +|+||.+.+|.+.++|+++|.+|.++++.+++.+++.+++|+++..++++.++.++++++++++++
T Consensus 263 GES~pv~K~~g~~-v~~Gt~~~~g~~~~~v~~~g~~T~l~~i~~lv~~a~~~k~~~~~~~d~~~~~~~~~vl~~a~~~~~ 341 (723)
T 3j09_A 263 GEPVPVLKSKGDE-VFGATINNTGVLKIRATRVGGETLLAQIVKLVEDAMGSKPPIQRLADKVVAYFIPTVLLVAISAFI 341 (723)
T ss_dssp CCSSCEEECTTCE-ECTTCEECSSCEEEEEEECGGGSHHHHHHHHHSSSCCSCCHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCCcceeecCCCe-eccceEEecCcEEEEEEEecCccHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999987665 999999999999999999999999999999999999999999999999999999888877777665
Q ss_pred HHHHHHhhccccccccccccchhhHHHHHHHHHHHHhhhhccCCchHHHHHHHHHHHHHHHhhCCCeeecchhhhhcCCe
Q 044020 157 VLIGRFLGEKVIHNEFTDWSSADALTLIDYFAVVVTIIDVAVPEGLPLAVTLSLAFAMKKLMNDGALVRHLSACETMGSA 236 (563)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ili~~~P~~l~~~~~~~~~~~~~~l~~~~i~~k~~~~le~l~~v 236 (563)
+|++.. . ..+...+..++++++++|||+|++++|+++..+..+++++|+++|+++++|.||++
T Consensus 342 ~~~~~~---------~--------~~~~~~~~~~i~vlvia~P~aL~la~p~a~~~~~~~~a~~gilvk~~~~lE~lg~v 404 (723)
T 3j09_A 342 YWYFIA---------H--------APLLFAFTTLIAVLVVACPCAFGLATPTALTVGMGKGAELGILIKNADALEVAEKV 404 (723)
T ss_dssp TSCSST---------T--------CTTCCSHHHHHHHHHHHSCTTHHHHHHHHHHHHHHHHHTTTCEESSTTHHHHGGGC
T ss_pred HHHHhc---------C--------CcHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHCCeEEeChHHHHHhhcC
Confidence 532110 0 01223467789999999999999999999999999999999999999999999999
Q ss_pred eeeecccccccccCceEEEEEEEcCeeeeecCCCccccccccccHHHHHHHHHHHHhccCCceeecCCCCceecCCccHH
Q 044020 237 SCICTDKTRMLTTNHMVVDKIWIANTISNVEGNNRKDILQSEISERVLDITLQAIFQNTGSKVVKDKDGKNSILGTPTES 316 (563)
Q Consensus 237 ~~i~~DKTGTLT~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~ 316 (563)
|++|||||||||+|+|.|.+++..+.. .++.+.+ +..++. .+.||.+.
T Consensus 405 ~~i~fDKTGTLT~g~~~v~~~~~~~~~----------------~~~~l~~---aa~~e~-------------~s~hP~~~ 452 (723)
T 3j09_A 405 TAVIFDKTGTLTKGKPEVTDLVPLNGD----------------ERELLRL---AAIAER-------------RSEHPIAE 452 (723)
T ss_dssp CEEEEEHHHHTSCSCCEEEEEEESSSC----------------HHHHHHH---HHHHHT-------------TCCSHHHH
T ss_pred CEEEEcCCCccccCceEEEEEEeCCCC----------------HHHHHHH---HHHHhc-------------cCCCchhH
Confidence 999999999999999999999875421 1222222 222221 22499999
Q ss_pred HHHHHHHHcCCChHHHhhhceEEEEecCCCCceeEEEEEEcCCCeE--EEEEeCChhHHHhcccccccCCCccccCCHHH
Q 044020 317 AILEFGLRLGGDFEAQRREFKIVKVEPFNSVRKKMSVLIALPAGGM--RAFCKGASEIVLSMCDKVVSDNGEPVPLSEEQ 394 (563)
Q Consensus 317 al~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~sviv~~~~~~~--~~~~kG~~~~il~~c~~~~~~~~~~~~~~~~~ 394 (563)
|+++++.+.+...... .+|.+ .++.+. ..+..|+++.+.+... +..
T Consensus 453 Ai~~~a~~~~~~~~~~---------~~~~~----------~~g~g~~~~~~~~g~~~~~~~~~~----------~~~--- 500 (723)
T 3j09_A 453 AIVKKALEHGIELGEP---------EKVEV----------IAGEGVVADGILVGNKRLMEDFGV----------AVS--- 500 (723)
T ss_dssp HHHHHHHHTTCCCCSC---------CCCEE----------ETTTEEEETTEEEECHHHHHHTTC----------CCC---
T ss_pred HHHHHHHhcCCCcCCc---------cceEE----------ecCCceEEEEEEECCHHHHHhcCC----------Ccc---
Confidence 9999998876543211 11111 122222 1245677776643221 112
Q ss_pred HHHHHHHHHHHHHHHHhHhHhhhhccCCCCCCCCCCCCCceEEEEecccCCCCcchHHHHHHHHhCCCeEEEEcCCCHHH
Q 044020 395 FRNITDVINGFASEALRTLCLAFKDLNDSSNENNIPDSGYTLIAVVGIKDPVRPGVKEAVQTCLEAGITVRMVTGDNINT 474 (563)
Q Consensus 395 ~~~i~~~~~~~~~~G~r~i~~a~~~l~~~~~~~~~~~~~~~~lG~i~~~d~~~~~~~~~I~~l~~~gi~v~i~TGd~~~~ 474 (563)
+.+....+.+..+|+|++++|+ |++++|+++++|++|++++++|++|+++|++++|+|||+..+
T Consensus 501 -~~~~~~~~~~~~~g~~~~~va~---------------~~~~~G~i~i~D~~~~~~~~~i~~l~~~Gi~v~~~TGd~~~~ 564 (723)
T 3j09_A 501 -NEVELALEKLEREAKTAVIVAR---------------NGRVEGIIAVSDTLKESAKPAVQELKRMGIKVGMITGDNWRS 564 (723)
T ss_dssp -HHHHHHHHHHHTTTCEEEEEEE---------------TTEEEEEEEEECCSCTTHHHHHHHHHHTTCEEEEECSSCHHH
T ss_pred -HHHHHHHHHHHhcCCeEEEEEE---------------CCEEEEEEeecCCcchhHHHHHHHHHHCCCEEEEECCCCHHH
Confidence 3456677888999999999884 469999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCCCCceeechhhhcCCCCCCCcceeEEEecChhhHHHHHHHHHHhcCCEEEEEcCCccCHHHHhhCCce
Q 044020 475 ARAIAKECGILTSDGEAVEGPEFRNMSPADIIPKLQVMARSLPSDKHTLVTQLRNTFGEVVAVTGDGTNDASALHEADIG 554 (563)
Q Consensus 475 a~~~a~~lgi~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~~~~g~~v~~iGDg~ND~~~l~~a~vg 554 (563)
+..+++++|++. +++++.|++|.++++.++++ +.|+|+|||.||++||++||+|
T Consensus 565 a~~ia~~lgi~~------------------------~~~~~~P~~K~~~v~~l~~~--~~v~~vGDg~ND~~al~~A~vg 618 (723)
T 3j09_A 565 AEAISRELNLDL------------------------VIAEVLPHQKSEEVKKLQAK--EVVAFVGDGINDAPALAQADLG 618 (723)
T ss_dssp HHHHHHHHTCSE------------------------EECSCCTTCHHHHHHHHTTT--CCEEEEECSSTTHHHHHHSSEE
T ss_pred HHHHHHHcCCcE------------------------EEccCCHHHHHHHHHHHhcC--CeEEEEECChhhHHHHhhCCEE
Confidence 999999999986 99999999999999999986 7899999999999999999999
Q ss_pred EeecCCCCC
Q 044020 555 LAMGIAGTE 563 (563)
Q Consensus 555 iamg~~~~~ 563 (563)
|||| +|+|
T Consensus 619 iamg-~g~~ 626 (723)
T 3j09_A 619 IAVG-SGSD 626 (723)
T ss_dssp EECC-CCSC
T ss_pred EEeC-CCcH
Confidence 9999 8864
|
| >2hc8_A PACS, cation-transporting ATPase, P-type; copper, COPA, COPB, actuator, transport protein; 1.65A {Archaeoglobus fulgidus} PDB: 2voy_F | Back alignment and structure |
|---|
Probab=99.94 E-value=2.6e-27 Score=195.80 Aligned_cols=108 Identities=27% Similarity=0.400 Sum_probs=98.8
Q ss_pred HHHHHHhccCeeEEEECCEEEEeecCCcccCcEEEeCCCCeeeceEEEEeeCceEEEeccCcCCCCcccccCCCCeEEec
Q 044020 15 RDLDREKKKIFIQVTRDGQRQKVCTYDLVVGDIVHLSIGDQVPAYGIFISGHSLLIDESSLSGQSEPRYMYEENPFLLAG 94 (563)
Q Consensus 15 ~~l~~~~~~~~~~V~r~g~~~~i~~~~L~~GDiI~v~~G~~iPaD~~ll~g~~l~Vdes~lTGes~p~~k~~~~~~i~~G 94 (563)
.+|.+ ..+..++|+|||+++.|++++|+|||+|.|++||+|||||+|++|.+ .||||+|||||.|+.|..++ .+|+|
T Consensus 4 ~~L~~-l~p~~a~v~r~g~~~~i~~~~l~~GDiv~v~~G~~iPaDg~v~~g~~-~vdeS~LTGEs~pv~k~~g~-~v~aG 80 (113)
T 2hc8_A 4 KKLVG-LQAKTAVVIRDGKEIAVPVEEVAVGDIVIVRPGEKIPVDGVVVEGES-YVDESMISGEPVPVLKSKGD-EVFGA 80 (113)
T ss_dssp HHHHH-HSCSEEEEEETTEEEEEEGGGCCTTCEEEECTTCBCCSEEEEEECCE-EEECHHHHCCSSCEEECTTC-EECTT
T ss_pred HHHhc-CCCCEEEEEECCEEEEEEHHHCCCCCEEEECCCCEEeeeEEEEEceE-EEEccccCCCCccEEECCCC-EEEeC
Confidence 34433 45788999999999999999999999999999999999999999985 99999999999999998765 59999
Q ss_pred ceeecCcEEEEEEEEcccchhHHHHHHhccC
Q 044020 95 TKVQGGSGKMLVTTVGMRTEWGKLMETLNEG 125 (563)
Q Consensus 95 t~v~~g~~~~~V~~tg~~t~~~~i~~~~~~~ 125 (563)
|.+.+|.+.++|+++|.+|++++|.+++.++
T Consensus 81 t~~~~G~~~~~V~~~g~~T~~~~i~~lv~~a 111 (113)
T 2hc8_A 81 TINNTGVLKIRATRVGGETLLAQIVKLVEDA 111 (113)
T ss_dssp CEECSSCEEEEEEECGGGSHHHHHHHHHHHH
T ss_pred CEEeeceEEEEEEEecCcCHHHHHHHHHHHh
Confidence 9999999999999999999999999988754
|
| >2yj3_A Copper-transporting ATPase; hydrolase, P-type ATPase, COPB, heavy metal translocation; 2.20A {Sulfolobus solfataricus} PDB: 2iye_A 2yj6_A* 2yj5_A* 2yj4_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=3.1e-28 Score=236.53 Aligned_cols=224 Identities=23% Similarity=0.360 Sum_probs=163.8
Q ss_pred HHHHHHhhCCCeeecchhhhhcCCeeeeecccccccccCceEEEEEEEcCeeeeecCCCccccccccccHHHHHHHHHHH
Q 044020 212 FAMKKLMNDGALVRHLSACETMGSASCICTDKTRMLTTNHMVVDKIWIANTISNVEGNNRKDILQSEISERVLDITLQAI 291 (563)
Q Consensus 212 ~~~~~l~~~~i~~k~~~~le~l~~v~~i~~DKTGTLT~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (563)
.++.+++++|+++|+++++|.|+++++||||||||||+|+|.+.++. + .++.+.++. ++
T Consensus 4 ~a~~~~~~~gil~k~~~~le~l~~i~~v~fDktGTLT~g~~~v~~~~--~------------------~~~~l~~~~-~~ 62 (263)
T 2yj3_A 4 SLYEKMLHKGMIIKNSNVYEKIKEIDTIIFEKTGTLTYGTPIVTQFI--G------------------DSLSLAYAA-SV 62 (263)
Confidence 46678999999999999999999999999999999999999998874 0 011111111 11
Q ss_pred HhccCCceeecCCCCceecCCccHHHHHHHHHHcCCChHHHhhhceEEEEecCCCCceeEEEEEEcCCCeEEEEEeCChh
Q 044020 292 FQNTGSKVVKDKDGKNSILGTPTESAILEFGLRLGGDFEAQRREFKIVKVEPFNSVRKKMSVLIALPAGGMRAFCKGASE 371 (563)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~e~al~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~sviv~~~~~~~~~~~kG~~~ 371 (563)
. ..+.||...|+.+++...+...... -.|. ...+.+....+++...
T Consensus 63 e---------------~~s~hp~a~ai~~~~~~~g~~~~~~---------~~~~----------~~~G~g~~~~~~~~~~ 108 (263)
T 2yj3_A 63 E---------------ALSSHPIAKAIVKYAKEQGVKILEV---------KDFK----------EISGIGVRGKISDKII 108 (263)
Confidence 1 1234899999988876554321110 0000 0011222111111100
Q ss_pred HHHhcccccccCCCccccCCHHHHHHHHHHHHHHHHHHHhHhHhhhhccCCCCCCCCCCCCCceEEEEecccCCCCcchH
Q 044020 372 IVLSMCDKVVSDNGEPVPLSEEQFRNITDVINGFASEALRTLCLAFKDLNDSSNENNIPDSGYTLIAVVGIKDPVRPGVK 451 (563)
Q Consensus 372 ~il~~c~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~G~r~i~~a~~~l~~~~~~~~~~~~~~~~lG~i~~~d~~~~~~~ 451 (563)
.+ |+. .+|.+ +.++ .+..+.|.+.+.++++|++.
T Consensus 109 ~~-----------G~~-------------------~~~~~-~~~~---------------~~~~~~~~~~~~~~~~~g~~ 142 (263)
T 2yj3_A 109 EV-----------KKA-------------------ENNND-IAVY---------------INGEPIASFNISDVPRPNLK 142 (263)
Confidence 00 100 02222 3333 23378999999999999999
Q ss_pred HHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCceeechhhhcCCCCCCCcceeEEEecChhhHHHHHHHHHHhc
Q 044020 452 EAVQTCLEAGITVRMVTGDNINTARAIAKECGILTSDGEAVEGPEFRNMSPADIIPKLQVMARSLPSDKHTLVTQLRNTF 531 (563)
Q Consensus 452 ~~I~~l~~~gi~v~i~TGd~~~~a~~~a~~lgi~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~~~~ 531 (563)
++|+.|+++|++++|+||++...+..+++++|+.. +|..+.|+.|..+++.++..
T Consensus 143 ~~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~gl~~------------------------~f~~~~p~~k~~~~~~l~~~- 197 (263)
T 2yj3_A 143 DYLEKLKNEGLKIIILSGDKEDKVKELSKELNIQE------------------------YYSNLSPEDKVRIIEKLKQN- 197 (263)
Confidence 99999999999999999999999999999999986 88888899999999999988
Q ss_pred CCEEEEEcCCccCHHHHhhCCceEeecCCCC
Q 044020 532 GEVVAVTGDGTNDASALHEADIGLAMGIAGT 562 (563)
Q Consensus 532 g~~v~~iGDg~ND~~~l~~a~vgiamg~~~~ 562 (563)
++.++||||+.||++|++.||+|++|| +++
T Consensus 198 ~~~~~~VGD~~~D~~aa~~Agv~va~g-~~~ 227 (263)
T 2yj3_A 198 GNKVLMIGDGVNDAAALALADVSVAMG-NGV 227 (263)
Confidence 889999999999999999999999999 654
|
| >2kij_A Copper-transporting ATPase 1; actuator, menkes disease, alternative splicing, ATP-binding, cell membrane, cytoplasm, disease mutation; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.93 E-value=2.5e-26 Score=193.44 Aligned_cols=115 Identities=24% Similarity=0.331 Sum_probs=100.3
Q ss_pred HHHHHHHHHHHHHhccCeeEEEECCE------EEEeecCCcccCcEEEeCCCCeeeceEEEEeeCceEEEeccCcCCCCc
Q 044020 8 YKQSLQFRDLDREKKKIFIQVTRDGQ------RQKVCTYDLVVGDIVHLSIGDQVPAYGIFISGHSLLIDESSLSGQSEP 81 (563)
Q Consensus 8 ~~~~~~~~~l~~~~~~~~~~V~r~g~------~~~i~~~~L~~GDiI~v~~G~~iPaD~~ll~g~~l~Vdes~lTGes~p 81 (563)
++..+...+|.+ ..+..++|+|+|. ++.|++++|+|||+|.|++||+|||||+|++|.+ .||||+|||||.|
T Consensus 3 ~ka~~~l~~L~~-l~p~~a~v~r~g~~~~~~~~~~v~~~~l~~GDiv~v~~G~~iPaDg~vi~g~~-~vdeS~LTGEs~p 80 (124)
T 2kij_A 3 FTMSEALAKLIS-LQATEATIVTLDSDNILLSEEQVDVELVQRGDIIKVVPGGKFPVDGRVIEGHS-MVDESLITGEAMP 80 (124)
T ss_dssp ---CCHHHHHHH-TCCSEEEEEECSSSTTCCEEEEEETTTCCTTCEEECCTTCBCSSCEEECSCCC-EEECTTTTCCSSC
T ss_pred HHHHHHHHHHhc-cCCCEEEEEECCCCCceeEEEEEeHHHCCCCCEEEECCCCEEEeeEEEEEccE-EEEeccccCCCcc
Confidence 344455555554 4578899999764 6899999999999999999999999999999998 8999999999999
Q ss_pred ccccCCCCeEEecceeecCcEEEEEEEEcccchhHHHHHHhccC
Q 044020 82 RYMYEENPFLLAGTKVQGGSGKMLVTTVGMRTEWGKLMETLNEG 125 (563)
Q Consensus 82 ~~k~~~~~~i~~Gt~v~~g~~~~~V~~tg~~t~~~~i~~~~~~~ 125 (563)
+.|..++ .+|+||.+.+|.+.++|+++|.+|.+++|.+++.++
T Consensus 81 v~k~~g~-~v~aGt~~~~G~~~~~v~~~g~~T~~~~I~~lv~~a 123 (124)
T 2kij_A 81 VAKKPGS-TVIAGSINQNGSLLICATHVGADTTLSQIVKLVEEA 123 (124)
T ss_dssp EECCTTE-EECTTCEEESSCCEEEECSCTTTCHHHHHHHHTTTT
T ss_pred EEeCCCC-EEEcCCEEeeeEEEEEEEEecccCHHHHHHHHHHhh
Confidence 9998654 699999999999999999999999999999998765
|
| >3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I | Back alignment and structure |
|---|
Probab=99.91 E-value=3e-23 Score=204.32 Aligned_cols=244 Identities=28% Similarity=0.388 Sum_probs=178.0
Q ss_pred HHHHHHhhCCCeeecchhhhhcCCeeeeecccccccccCceEEEEEEEcCeeeeecCCCccccccccccHHHHHHHHHHH
Q 044020 212 FAMKKLMNDGALVRHLSACETMGSASCICTDKTRMLTTNHMVVDKIWIANTISNVEGNNRKDILQSEISERVLDITLQAI 291 (563)
Q Consensus 212 ~~~~~l~~~~i~~k~~~~le~l~~v~~i~~DKTGTLT~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (563)
-+.++++++|+++|+++++|.++++++||||||||||.+.+.+.+++..+. ..++.+.++ .++
T Consensus 8 ~~~~~~~~~gilik~~~~le~l~~i~~viFD~dGTL~ds~~~~~~~~~~~~----------------~~~~~l~~~-~~~ 70 (287)
T 3a1c_A 8 HGSRKGAELGILIKNADALEVAEKVTAVIFDKTGTLTKGKPEVTDLVPLNG----------------DERELLRLA-AIA 70 (287)
T ss_dssp ------CCCCEEECSTTHHHHHHHCCEEEEECCCCCBCSCCEEEEEEESSS----------------CHHHHHHHH-HHH
T ss_pred hhHHHHHHCCEEEeCcHHHHHhhcCCEEEEeCCCCCcCCCEEEEEEEeCCC----------------CHHHHHHHH-HHH
Confidence 467889999999999999999999999999999999999999998866432 022333322 111
Q ss_pred HhccCCceeecCCCCceecCCccHHHHHHHHHHcCCChHHHhhhceEEEEecCCCCceeEEEEEEcCCCeEE--EEEeCC
Q 044020 292 FQNTGSKVVKDKDGKNSILGTPTESAILEFGLRLGGDFEAQRREFKIVKVEPFNSVRKKMSVLIALPAGGMR--AFCKGA 369 (563)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~e~al~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~sviv~~~~~~~~--~~~kG~ 369 (563)
. ..+.||.+.|+.+++...|...... +.+.. ..+.+.. .+.+|.
T Consensus 71 --e-------------~~s~hp~~~a~~~~~~~~g~~~~~~----~~~~~---------------~~G~~~~~~~~~~g~ 116 (287)
T 3a1c_A 71 --E-------------RRSEHPIAEAIVKKALEHGIELGEP----EKVEV---------------IAGEGVVADGILVGN 116 (287)
T ss_dssp --T-------------TTCCSHHHHHHHHHHHHTTCCCCCC----SCEEE---------------ETTTEEEETTEEEEC
T ss_pred --h-------------hcCCCHHHHHHHHHHHhcCCCcccc----cccee---------------ecCCCeEEEEEEECC
Confidence 1 1235999999999988877542100 00000 1121111 123354
Q ss_pred hhHHHhcccccccCCCccccCCHHHHHHHHHHHHHHHHHHHhHhHhhhhccCCCCCCCCCCCCCceEEEEecccCCCCcc
Q 044020 370 SEIVLSMCDKVVSDNGEPVPLSEEQFRNITDVINGFASEALRTLCLAFKDLNDSSNENNIPDSGYTLIAVVGIKDPVRPG 449 (563)
Q Consensus 370 ~~~il~~c~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~G~r~i~~a~~~l~~~~~~~~~~~~~~~~lG~i~~~d~~~~~ 449 (563)
++.+...+ . ++++ .+....+.+..+|.+++++++. ..+.+.+...++++|+
T Consensus 117 ~~~~~~~~--------~--~~~~----~~~~~~~~~~~~g~~~i~~~~d---------------~~~~~~~~~~~~~~~g 167 (287)
T 3a1c_A 117 KRLMEDFG--------V--AVSN----EVELALEKLEREAKTAVIVARN---------------GRVEGIIAVSDTLKES 167 (287)
T ss_dssp HHHHHHTT--------C--CCCH----HHHHHHHHHHHTTCEEEEEEET---------------TEEEEEEEEECCBCTT
T ss_pred HHHHHhcC--------C--CccH----HHHHHHHHHHhCCCeEEEEEEC---------------CEEEEEEEeccccchh
Confidence 44332211 1 1111 2344566677788888888753 3899999999999999
Q ss_pred hHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCceeechhhhcCCCCCCCcceeEEEecChhhHHHHHHHHHH
Q 044020 450 VKEAVQTCLEAGITVRMVTGDNINTARAIAKECGILTSDGEAVEGPEFRNMSPADIIPKLQVMARSLPSDKHTLVTQLRN 529 (563)
Q Consensus 450 ~~~~I~~l~~~gi~v~i~TGd~~~~a~~~a~~lgi~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~~ 529 (563)
+.++|+.|+++|+++.++||++...+..+++.+|+.. +|..+.|..|...++.++.
T Consensus 168 ~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~gl~~------------------------~f~~i~~~~K~~~~~~l~~ 223 (287)
T 3a1c_A 168 AKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLDL------------------------VIAEVLPHQKSEEVKKLQA 223 (287)
T ss_dssp HHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCSE------------------------EECSCCTTCHHHHHHHHTT
T ss_pred HHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhCCce------------------------eeeecChHHHHHHHHHHhc
Confidence 9999999999999999999999999999999999975 7888889999999999887
Q ss_pred hcCCEEEEEcCCccCHHHHhhCCceEeecCCCC
Q 044020 530 TFGEVVAVTGDGTNDASALHEADIGLAMGIAGT 562 (563)
Q Consensus 530 ~~g~~v~~iGDg~ND~~~l~~a~vgiamg~~~~ 562 (563)
. +.+++|||+.||++|++.||++++|| ++.
T Consensus 224 ~--~~~~~vGDs~~Di~~a~~ag~~v~~~-~~~ 253 (287)
T 3a1c_A 224 K--EVVAFVGDGINDAPALAQADLGIAVG-SGS 253 (287)
T ss_dssp T--CCEEEEECTTTCHHHHHHSSEEEEEC-CCS
T ss_pred C--CeEEEEECCHHHHHHHHHCCeeEEeC-CCC
Confidence 6 78999999999999999999999998 653
|
| >3skx_A Copper-exporting P-type ATPase B; P1B-ATPase, ATP binding domain, copper(II) transporter, MEMB protein, hydrolase; 1.59A {Archaeoglobus fulgidus} PDB: 3sky_A* | Back alignment and structure |
|---|
Probab=99.84 E-value=2.5e-20 Score=182.52 Aligned_cols=234 Identities=26% Similarity=0.363 Sum_probs=160.5
Q ss_pred eecchhhhhcCCeeeeecccccccccCceEEEEEEEcCeeeeecCCCccccccccccHHHHHHHHHHHHhccCCceeecC
Q 044020 224 VRHLSACETMGSASCICTDKTRMLTTNHMVVDKIWIANTISNVEGNNRKDILQSEISERVLDITLQAIFQNTGSKVVKDK 303 (563)
Q Consensus 224 ~k~~~~le~l~~v~~i~~DKTGTLT~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (563)
+|+++++|.++++++|+||++||||.+++.|.+++..+.. ....+.++ .++...
T Consensus 1 ~k~~~~~e~~~~ik~i~FD~DGTL~d~~~~v~~~~~~~~~----------------~~~~~~~~-~~~~~~--------- 54 (280)
T 3skx_A 1 MRDRQAFERAKDLQAVIFDKTGTLTEGRFGVTDIVGFNHS----------------EDELLQIA-ASLEAR--------- 54 (280)
T ss_dssp ----CHHHHGGGCCEEEEECCCCCEEEEEEEEEEEESSSC----------------HHHHHHHH-HHHHTT---------
T ss_pred CCChHHHHHhcCCCEEEEeCCCcCCCCcEEEEEEEecCCC----------------HHHHHHHH-HHhhcc---------
Confidence 5899999999999999999999999999999998765431 22233322 222111
Q ss_pred CCCceecCCccHHHHHHHHHHcCCChHHHhhhceEEEEecCCCCceeEEEEEEcCCCeEEEEEeCChhHHHhcccccccC
Q 044020 304 DGKNSILGTPTESAILEFGLRLGGDFEAQRREFKIVKVEPFNSVRKKMSVLIALPAGGMRAFCKGASEIVLSMCDKVVSD 383 (563)
Q Consensus 304 ~~~~~~~~~~~e~al~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~sviv~~~~~~~~~~~kG~~~~il~~c~~~~~~ 383 (563)
+.++...++.+++...+..... ...+..++-. . ....+ ++. .+..|.++.+......
T Consensus 55 ------s~~~~~~a~~~~~~~~g~~~~~----~~~~~~~~g~---~-~~~~~---~~~--~~~~~~~~~~~~~~~~---- 111 (280)
T 3skx_A 55 ------SEHPIAAAIVEEAEKRGFGLTE----VEEFRAIPGK---G-VEGIV---NGR--RYMVVSPGYIRELGIK---- 111 (280)
T ss_dssp ------CCSHHHHHHHHHHHHTTCCCCC----CEEEEEETTT---E-EEEEE---TTE--EEEEECHHHHHHTTCC----
T ss_pred ------CCCHHHHHHHHHHHhcCCCCCC----ccceeecCCC---E-EEEEE---CCE--EEEEecHHHHHHcCCC----
Confidence 1377888888888877653211 1111111110 0 11111 111 1123555444332211
Q ss_pred CCccccCCHHHHHHHHHHHHHHHHHHHhHhHhhhhccCCCCCCCCCCCCCceEEEEecccCCCCcchHHHHHHHHhCCCe
Q 044020 384 NGEPVPLSEEQFRNITDVINGFASEALRTLCLAFKDLNDSSNENNIPDSGYTLIAVVGIKDPVRPGVKEAVQTCLEAGIT 463 (563)
Q Consensus 384 ~~~~~~~~~~~~~~i~~~~~~~~~~G~r~i~~a~~~l~~~~~~~~~~~~~~~~lG~i~~~d~~~~~~~~~I~~l~~~gi~ 463 (563)
.. .....+...+.+.+..+ .+..++|.+.+.++++|++.++++.|+++|++
T Consensus 112 ------~~--------~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~ 162 (280)
T 3skx_A 112 ------TD--------ESVEKLKQQGKTVVFIL---------------KNGEVSGVIALADRIRPESREAISKLKAIGIK 162 (280)
T ss_dssp ------CC--------TTHHHHHTTTCEEEEEE---------------ETTEEEEEEEEEEEECTTHHHHHHHHHHTTCE
T ss_pred ------ch--------HHHHHHHhCCCeEEEEE---------------ECCEEEEEEEecCCCCHhHHHHHHHHHHCCCE
Confidence 00 11223334444444333 34488999999999999999999999999999
Q ss_pred EEEEcCCCHHHHHHHHHHcCCCCCCCceeechhhhcCCCCCCCcceeEEEecChhhHHHHHHHHHHhcCCEEEEEcCCcc
Q 044020 464 VRMVTGDNINTARAIAKECGILTSDGEAVEGPEFRNMSPADIIPKLQVMARSLPSDKHTLVTQLRNTFGEVVAVTGDGTN 543 (563)
Q Consensus 464 v~i~TGd~~~~a~~~a~~lgi~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~~~~g~~v~~iGDg~N 543 (563)
+.++||++...+..+++.+|+.. +|..+.|.+|...++.+.+. ..+++|||+.|
T Consensus 163 ~~i~T~~~~~~~~~~~~~~gl~~------------------------~f~~~~~~~k~~~~k~~~~~--~~~~~vGD~~n 216 (280)
T 3skx_A 163 CMMLTGDNRFVAKWVAEELGLDD------------------------YFAEVLPHEKAEKVKEVQQK--YVTAMVGDGVN 216 (280)
T ss_dssp EEEECSSCHHHHHHHHHHHTCSE------------------------EECSCCGGGHHHHHHHHHTT--SCEEEEECTTT
T ss_pred EEEEeCCCHHHHHHHHHHcCChh------------------------HhHhcCHHHHHHHHHHHHhc--CCEEEEeCCch
Confidence 99999999999999999999976 88889999999999999886 36899999999
Q ss_pred CHHHHhhCCceEeecCCCC
Q 044020 544 DASALHEADIGLAMGIAGT 562 (563)
Q Consensus 544 D~~~l~~a~vgiamg~~~~ 562 (563)
|++|++.||+||+|| +++
T Consensus 217 Di~~~~~Ag~~va~~-~~~ 234 (280)
T 3skx_A 217 DAPALAQADVGIAIG-AGT 234 (280)
T ss_dssp THHHHHHSSEEEECS-CCS
T ss_pred hHHHHHhCCceEEec-CCc
Confidence 999999999999999 764
|
| >3gwi_A Magnesium-transporting ATPase, P-type 1; P-type ATPase, nucleotide binding, ATP binding, MGTA, membra protein, cell inner membrane; 1.60A {Escherichia coli} | Back alignment and structure |
|---|
Probab=99.80 E-value=1.1e-19 Score=162.46 Aligned_cols=132 Identities=26% Similarity=0.387 Sum_probs=114.2
Q ss_pred CCccHHHHHHHHHHcCCChHHHhhhceEEEEecCCCCceeEEEEEEcCCCeEEEEEeCChhHHHhcccccccCCCccccC
Q 044020 311 GTPTESAILEFGLRLGGDFEAQRREFKIVKVEPFNSVRKKMSVLIALPAGGMRAFCKGASEIVLSMCDKVVSDNGEPVPL 390 (563)
Q Consensus 311 ~~~~e~al~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~sviv~~~~~~~~~~~kG~~~~il~~c~~~~~~~~~~~~~ 390 (563)
++|+|.|+++++...+ ....+..|+++..+||++.||||+++++.+++.+++++||+||.|+++|+.+.. +|...|+
T Consensus 33 ~n~~d~Ail~~~~~~~--~~~~~~~~~~~~eiPFds~rKrmsvv~~~~~g~~~l~~KGApE~IL~~C~~~~~-~g~~~~l 109 (170)
T 3gwi_A 33 KNLLDTAVLEGTDEES--ARSLASRWQKIDEIPFDFERRRMSVVVAENTEHHQLVCKGALQEILNVCSQVRH-NGEIVPL 109 (170)
T ss_dssp CCHHHHHHHHTSCHHH--HHHHHHHSEEEEEECCCTTTCEEEEEEESSSSEEEEEEEECHHHHHTTEEEEEE-TTEEEEC
T ss_pred CChHHHHHHHHHHhcC--hhhhhhcCeEEeeEecCcccCcEEEEEEeCCCCEEEEEcCCcHHHHHHhHHHhc-CCCcccC
Confidence 5999999999875432 344567899999999999999999999987788899999999999999998754 6888999
Q ss_pred CHHHHHHHHHHHHHHHHHHHhHhHhhhhccCCCCCC-CCCCCCCceEEEEecccCC
Q 044020 391 SEEQFRNITDVINGFASEALRTLCLAFKDLNDSSNE-NNIPDSGYTLIAVVGIKDP 445 (563)
Q Consensus 391 ~~~~~~~i~~~~~~~~~~G~r~i~~a~~~l~~~~~~-~~~~~~~~~~lG~i~~~d~ 445 (563)
+++.++.+.+.++.|+++|+||+++|||.++..+.. ....|.+|+|+|+++|-|.
T Consensus 110 ~~~~~~~i~~~~~~la~~GlRvLavA~k~~~~~~~~~~~~~E~~L~f~G~~g~~~~ 165 (170)
T 3gwi_A 110 DDIMLRKIKRVTDTLNRQGLRVVAVATKYLPAREGDYQRADESDLILEGYIAFLDH 165 (170)
T ss_dssp CHHHHHHHHHHHHHHHHTTCEEEEEEEEEEECCSSCCCGGGSCSEEEEEEEEEEC-
T ss_pred CHHHHHHHHHHHHHHHhCCCEEEEEEEEECCCCccccCccccCCcEEEehhccccc
Confidence 999999999999999999999999999999865432 2356899999999999875
|
| >4fe3_A Cytosolic 5'-nucleotidase 3; substrate complex, HAD-like, protein binding; HET: U5P; 1.74A {Mus musculus} PDB: 2g09_A* 2bdu_A* 2g08_A 2g06_A* 2g0a_A* 2q4t_A* 2g07_A* 2jga_A 2vkq_A 2cn1_A | Back alignment and structure |
|---|
Probab=99.63 E-value=2e-17 Score=163.39 Aligned_cols=115 Identities=13% Similarity=0.104 Sum_probs=89.0
Q ss_pred ccCCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCceeechhhhcCCCC-----CCCcceeEEEecC
Q 044020 442 IKDPVRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAKECGILTSDGEAVEGPEFRNMSPA-----DIIPKLQVMARSL 516 (563)
Q Consensus 442 ~~d~~~~~~~~~I~~l~~~gi~v~i~TGd~~~~a~~~a~~lgi~~~~~~~~~g~~~~~~~~~-----~~~~~~~v~~~~~ 516 (563)
...+++|++.++++.|+++|++++|+||+....+.++++++|+...+..++..... .... ...+....+++..
T Consensus 138 ~~i~l~~g~~e~i~~l~~~gi~v~ivSgg~~~~i~~i~~~~g~~~~~~~i~~n~l~--~~~~~~~~~~~~~~i~~~~k~~ 215 (297)
T 4fe3_A 138 SDVMLKEGYENFFGKLQQHGIPVFIFSAGIGDVLEEVIRQAGVYHSNVKVVSNFMD--FDENGVLKGFKGELIHVFNKHD 215 (297)
T ss_dssp SCCCBCBTHHHHHHHHHHTTCCEEEEEEEEHHHHHHHHHHTTCCCTTEEEEEECEE--ECTTSBEEEECSSCCCTTCHHH
T ss_pred cCCCCCCcHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHHHcCCCcccceEEeeeEE--EcccceeEeccccccchhhccc
Confidence 35789999999999999999999999999999999999999997654333322110 1111 0111223556667
Q ss_pred hhhHHHHHHHHHHhcCCEEEEEcCCccCHHH---HhhCCceEeecC
Q 044020 517 PSDKHTLVTQLRNTFGEVVAVTGDGTNDASA---LHEADIGLAMGI 559 (563)
Q Consensus 517 p~~K~~~v~~l~~~~g~~v~~iGDg~ND~~~---l~~a~vgiamg~ 559 (563)
|.+|...+..++.. ++.|+|+|||.||+|| |+.||+|||||.
T Consensus 216 ~~~k~~~~~~~~~~-~~~v~~vGDGiNDa~m~k~l~~advgiaiGf 260 (297)
T 4fe3_A 216 GALKNTDYFSQLKD-NSNIILLGDSQGDLRMADGVANVEHILKIGY 260 (297)
T ss_dssp HHHTCHHHHHHTTT-CCEEEEEESSGGGGGTTTTCSCCSEEEEEEE
T ss_pred HHHHHHHHHHhhcc-CCEEEEEeCcHHHHHHHhCccccCeEEEEEe
Confidence 78888888888887 8999999999999999 559999999993
|
| >1l6r_A Hypothetical protein TA0175; structural genomics, putative hydrolas midwest center for structural genomics, MCSG, PSI; 1.40A {Thermoplasma acidophilum} SCOP: c.108.1.10 PDB: 1kyt_A | Back alignment and structure |
|---|
Probab=99.19 E-value=3.6e-11 Score=113.40 Aligned_cols=117 Identities=17% Similarity=0.186 Sum_probs=86.1
Q ss_pred cCCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCceeechhhhcCCCCCC-----------------
Q 044020 443 KDPVRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAKECGILTSDGEAVEGPEFRNMSPADI----------------- 505 (563)
Q Consensus 443 ~d~~~~~~~~~I~~l~~~gi~v~i~TGd~~~~a~~~a~~lgi~~~~~~~~~g~~~~~~~~~~~----------------- 505 (563)
...+.+.++++|++|+++|++++++|||+...+..+++++|+..+ .+..+|..+.....+.+
T Consensus 20 ~~~i~~~~~~~l~~l~~~g~~~~i~TGr~~~~~~~~~~~l~~~~~-~I~~NGa~i~~~~~~~i~~~~~l~~~~~i~~~~~ 98 (227)
T 1l6r_A 20 DRLISTKAIESIRSAEKKGLTVSLLSGNVIPVVYALKIFLGINGP-VFGENGGIMFDNDGSIKKFFSNEGTNKFLEEMSK 98 (227)
T ss_dssp TSCBCHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCCSC-EEEGGGTEEECTTSCEEESSCSHHHHHHHHHHTT
T ss_pred CCcCCHHHHHHHHHHHHCCCEEEEECCCCcHHHHHHHHHhCCCCe-EEEeCCcEEEeCCCCEEEEeccHHHHHHHHHHHH
Confidence 456889999999999999999999999999999999999998642 22222322211000000
Q ss_pred -----------------------------------CcceeE-----EEecCh--hhHHHHHHHHHHhcC---CEEEEEcC
Q 044020 506 -----------------------------------IPKLQV-----MARSLP--SDKHTLVTQLRNTFG---EVVAVTGD 540 (563)
Q Consensus 506 -----------------------------------~~~~~v-----~~~~~p--~~K~~~v~~l~~~~g---~~v~~iGD 540 (563)
+ ...+ +.++.| ..|...++.+.+.++ +.++++||
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ei~~~~~~K~~~l~~l~~~~~~~~~~~~~iGD 177 (227)
T 1l6r_A 99 RTSMRSILTNRWREASTGFDIDPEDVDYVRKEAESR-GFVIFYSGYSWHLMNRGEDKAFAVNKLKEMYSLEYDEILVIGD 177 (227)
T ss_dssp TSSCBCCGGGGGCSSSEEEBCCGGGHHHHHHHHHTT-TEEEEEETTEEEEEETTCSHHHHHHHHHHHTTCCGGGEEEECC
T ss_pred HhcCCccccccceecccceEEecCCHHHHHHHHHhc-CEEEEecCcEEEEecCCCCHHHHHHHHHHHhCcCHHHEEEECC
Confidence 0 1111 123335 579999999988755 57999999
Q ss_pred CccCHHHHhhCCceEeecCCCC
Q 044020 541 GTNDASALHEADIGLAMGIAGT 562 (563)
Q Consensus 541 g~ND~~~l~~a~vgiamg~~~~ 562 (563)
+.||++|++.|++|+||| |+.
T Consensus 178 ~~nD~~m~~~ag~~va~~-n~~ 198 (227)
T 1l6r_A 178 SNNDMPMFQLPVRKACPA-NAT 198 (227)
T ss_dssp SGGGHHHHTSSSEEEECT-TSC
T ss_pred cHHhHHHHHHcCceEEec-Cch
Confidence 999999999999999999 775
|
| >3n07_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; structural genomics, phosphatase, PSI-2, protein structure initiative; HET: MSE; 1.76A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=99.08 E-value=4.8e-11 Score=109.40 Aligned_cols=84 Identities=19% Similarity=0.299 Sum_probs=72.4
Q ss_pred HHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCceeechhhhcCCCCCCCcceeEEEecChhhHHHHHHHHHHhc
Q 044020 452 EAVQTCLEAGITVRMVTGDNINTARAIAKECGILTSDGEAVEGPEFRNMSPADIIPKLQVMARSLPSDKHTLVTQLRNTF 531 (563)
Q Consensus 452 ~~I~~l~~~gi~v~i~TGd~~~~a~~~a~~lgi~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~~~~ 531 (563)
.+|+.|+++|+++.++||++...+..+++++|+.. +|... ..|...++.+.+.+
T Consensus 59 ~~l~~L~~~G~~~~ivT~~~~~~~~~~l~~lgi~~------------------------~~~~~--k~k~~~~~~~~~~~ 112 (195)
T 3n07_A 59 YGVKALMNAGIEIAIITGRRSQIVENRMKALGISL------------------------IYQGQ--DDKVQAYYDICQKL 112 (195)
T ss_dssp HHHHHHHHTTCEEEEECSSCCHHHHHHHHHTTCCE------------------------EECSC--SSHHHHHHHHHHHH
T ss_pred HHHHHHHHCCCEEEEEECcCHHHHHHHHHHcCCcE------------------------EeeCC--CCcHHHHHHHHHHh
Confidence 45999999999999999999999999999999975 66544 55777777776654
Q ss_pred C---CEEEEEcCCccCHHHHhhCCceEeecCCCC
Q 044020 532 G---EVVAVTGDGTNDASALHEADIGLAMGIAGT 562 (563)
Q Consensus 532 g---~~v~~iGDg~ND~~~l~~a~vgiamg~~~~ 562 (563)
+ +.+++|||+.||++|++.||++++|+ |+.
T Consensus 113 ~~~~~~~~~vGD~~nDi~~~~~ag~~va~~-na~ 145 (195)
T 3n07_A 113 AIAPEQTGYIGDDLIDWPVMEKVALRVCVA-DGH 145 (195)
T ss_dssp CCCGGGEEEEESSGGGHHHHTTSSEEEECT-TSC
T ss_pred CCCHHHEEEEcCCHHHHHHHHHCCCEEEEC-ChH
Confidence 4 68999999999999999999999999 764
|
| >3ewi_A N-acylneuraminate cytidylyltransferase; beta barrel, HAD-like, rossmannoid fold, nucleotidyltransferase, nucleus; 1.90A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.08 E-value=9.1e-11 Score=104.58 Aligned_cols=95 Identities=19% Similarity=0.253 Sum_probs=77.0
Q ss_pred CCceEEEEecccCCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHH--HcCCCCCCCceeechhhhcCCCCCCCcce
Q 044020 432 SGYTLIAVVGIKDPVRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAK--ECGILTSDGEAVEGPEFRNMSPADIIPKL 509 (563)
Q Consensus 432 ~~~~~lG~i~~~d~~~~~~~~~I~~l~~~gi~v~i~TGd~~~~a~~~a~--~lgi~~~~~~~~~g~~~~~~~~~~~~~~~ 509 (563)
.+...++.+.++|. .+|+.|+++|+++.++||+ ..+..+++ .+|+.
T Consensus 29 ~~g~~~~~f~~~D~------~~L~~Lk~~Gi~~~I~Tg~--~~~~~~l~~l~lgi~------------------------ 76 (168)
T 3ewi_A 29 GDQKEIISYDVKDA------IGISLLKKSGIEVRLISER--ACSKQTLSALKLDCK------------------------ 76 (168)
T ss_dssp SSCCCEEEEEHHHH------HHHHHHHHTTCEEEEECSS--CCCHHHHHTTCCCCC------------------------
T ss_pred CCCCEEEEEecCcH------HHHHHHHHCCCEEEEEeCc--HHHHHHHHHhCCCcE------------------------
Confidence 34466777777776 3899999999999999999 67888899 55653
Q ss_pred eEEEecChhhHHHHHHHHHHhcC---CEEEEEcCCccCHHHHhhCCceEeecCCCC
Q 044020 510 QVMARSLPSDKHTLVTQLRNTFG---EVVAVTGDGTNDASALHEADIGLAMGIAGT 562 (563)
Q Consensus 510 ~v~~~~~p~~K~~~v~~l~~~~g---~~v~~iGDg~ND~~~l~~a~vgiamg~~~~ 562 (563)
+|. .+.+|...++.+.+++| +.+++|||+.||++|++.|++++||+ |+.
T Consensus 77 -~~~--g~~~K~~~l~~~~~~~gi~~~~~~~vGD~~nDi~~~~~ag~~~a~~-na~ 128 (168)
T 3ewi_A 77 -TEV--SVSDKLATVDEWRKEMGLCWKEVAYLGNEVSDEECLKRVGLSAVPA-DAC 128 (168)
T ss_dssp -EEC--SCSCHHHHHHHHHHHTTCCGGGEEEECCSGGGHHHHHHSSEEEECT-TCC
T ss_pred -EEE--CCCChHHHHHHHHHHcCcChHHEEEEeCCHhHHHHHHHCCCEEEeC-Chh
Confidence 332 24578888888887755 68999999999999999999999999 775
|
| >1k1e_A Deoxy-D-mannose-octulosonate 8-phosphate phosphat; structural genomics, KDO 8-P phosphatase, structure function project, S2F; HET: MES; 1.67A {Haemophilus influenzae RD} SCOP: c.108.1.5 PDB: 1j8d_A* | Back alignment and structure |
|---|
Probab=99.03 E-value=3.3e-10 Score=102.69 Aligned_cols=90 Identities=20% Similarity=0.244 Sum_probs=76.1
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCceeechhhhcCCCCCCCcceeEEEecChhhHHHHHH
Q 044020 446 VRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAKECGILTSDGEAVEGPEFRNMSPADIIPKLQVMARSLPSDKHTLVT 525 (563)
Q Consensus 446 ~~~~~~~~I~~l~~~gi~v~i~TGd~~~~a~~~a~~lgi~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~ 525 (563)
+.+.+.++|++|+++|++++++||++...+..+++++|+.. +|.. ...|...++
T Consensus 36 ~~~~~~~~l~~L~~~G~~~~i~Tg~~~~~~~~~~~~lgl~~------------------------~~~~--~k~k~~~~~ 89 (180)
T 1k1e_A 36 FHVRDGLGIKMLMDADIQVAVLSGRDSPILRRRIADLGIKL------------------------FFLG--KLEKETACF 89 (180)
T ss_dssp EEHHHHHHHHHHHHTTCEEEEEESCCCHHHHHHHHHHTCCE------------------------EEES--CSCHHHHHH
T ss_pred eccchHHHHHHHHHCCCeEEEEeCCCcHHHHHHHHHcCCce------------------------eecC--CCCcHHHHH
Confidence 34567899999999999999999999999999999999975 5543 345677777
Q ss_pred HHHHhcC---CEEEEEcCCccCHHHHhhCCceEeecCCCC
Q 044020 526 QLRNTFG---EVVAVTGDGTNDASALHEADIGLAMGIAGT 562 (563)
Q Consensus 526 ~l~~~~g---~~v~~iGDg~ND~~~l~~a~vgiamg~~~~ 562 (563)
.+.++++ +.+++|||+.||++|++.||++++|+ ++.
T Consensus 90 ~~~~~~~~~~~~~~~vGD~~~Di~~~~~ag~~~~~~-~~~ 128 (180)
T 1k1e_A 90 DLMKQAGVTAEQTAYIGDDSVDLPAFAACGTSFAVA-DAP 128 (180)
T ss_dssp HHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TSC
T ss_pred HHHHHcCCCHHHEEEECCCHHHHHHHHHcCCeEEeC-Ccc
Confidence 6665545 78999999999999999999999998 664
|
| >3mn1_A Probable YRBI family phosphatase; structural genomics, PSI, protein structure initiative, NYSG phosphatase; 1.80A {Pseudomonas syringae PV} PDB: 3nrj_A | Back alignment and structure |
|---|
Probab=99.03 E-value=4.1e-10 Score=102.86 Aligned_cols=83 Identities=22% Similarity=0.388 Sum_probs=73.6
Q ss_pred HHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCceeechhhhcCCCCCCCcceeEEEecChhhHHHHHHHHHHhcC
Q 044020 453 AVQTCLEAGITVRMVTGDNINTARAIAKECGILTSDGEAVEGPEFRNMSPADIIPKLQVMARSLPSDKHTLVTQLRNTFG 532 (563)
Q Consensus 453 ~I~~l~~~gi~v~i~TGd~~~~a~~~a~~lgi~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~~~~g 532 (563)
+|+.|+++|+++.++||++...+..+++++|+.. +|... ..|...++.+.+.+|
T Consensus 54 ~l~~L~~~g~~~~i~T~~~~~~~~~~~~~lgl~~------------------------~f~~~--~~K~~~~~~~~~~~g 107 (189)
T 3mn1_A 54 GIKMLIASGVTTAIISGRKTAIVERRAKSLGIEH------------------------LFQGR--EDKLVVLDKLLAELQ 107 (189)
T ss_dssp HHHHHHHTTCEEEEECSSCCHHHHHHHHHHTCSE------------------------EECSC--SCHHHHHHHHHHHHT
T ss_pred HHHHHHHCCCEEEEEECcChHHHHHHHHHcCCHH------------------------HhcCc--CChHHHHHHHHHHcC
Confidence 8999999999999999999999999999999975 66554 677788888777655
Q ss_pred ---CEEEEEcCCccCHHHHhhCCceEeecCCCC
Q 044020 533 ---EVVAVTGDGTNDASALHEADIGLAMGIAGT 562 (563)
Q Consensus 533 ---~~v~~iGDg~ND~~~l~~a~vgiamg~~~~ 562 (563)
+.++++||+.||++|++.||++++|+ ++.
T Consensus 108 ~~~~~~~~vGD~~nDi~~~~~ag~~~~~~-~~~ 139 (189)
T 3mn1_A 108 LGYEQVAYLGDDLPDLPVIRRVGLGMAVA-NAA 139 (189)
T ss_dssp CCGGGEEEEECSGGGHHHHHHSSEEEECT-TSC
T ss_pred CChhHEEEECCCHHHHHHHHHCCCeEEeC-Ccc
Confidence 68999999999999999999999999 664
|
| >3ij5_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; IDP022 hydrolase, lipopolysaccharide biosynthesis, magnesium, STRU genomics; 1.95A {Yersinia pestis} | Back alignment and structure |
|---|
Probab=99.02 E-value=5.6e-10 Score=103.59 Aligned_cols=83 Identities=23% Similarity=0.305 Sum_probs=73.5
Q ss_pred HHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCceeechhhhcCCCCCCCcceeEEEecChhhHHHHHHHHHHhcC
Q 044020 453 AVQTCLEAGITVRMVTGDNINTARAIAKECGILTSDGEAVEGPEFRNMSPADIIPKLQVMARSLPSDKHTLVTQLRNTFG 532 (563)
Q Consensus 453 ~I~~l~~~gi~v~i~TGd~~~~a~~~a~~lgi~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~~~~g 532 (563)
+|+.|+++|+++.++||++...+..+++++|+.. +|... ..|...++.+.+.+|
T Consensus 84 ~L~~L~~~G~~l~I~T~~~~~~~~~~l~~lgi~~------------------------~f~~~--k~K~~~l~~~~~~lg 137 (211)
T 3ij5_A 84 GIRCLITSDIDVAIITGRRAKLLEDRANTLGITH------------------------LYQGQ--SDKLVAYHELLATLQ 137 (211)
T ss_dssp HHHHHHHTTCEEEEECSSCCHHHHHHHHHHTCCE------------------------EECSC--SSHHHHHHHHHHHHT
T ss_pred HHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCch------------------------hhccc--CChHHHHHHHHHHcC
Confidence 8999999999999999999999999999999975 66655 567778777776654
Q ss_pred ---CEEEEEcCCccCHHHHhhCCceEeecCCCC
Q 044020 533 ---EVVAVTGDGTNDASALHEADIGLAMGIAGT 562 (563)
Q Consensus 533 ---~~v~~iGDg~ND~~~l~~a~vgiamg~~~~ 562 (563)
+.++++||+.||++|++.||++++|+ ++.
T Consensus 138 ~~~~~~~~vGDs~nDi~~~~~ag~~~a~~-~~~ 169 (211)
T 3ij5_A 138 CQPEQVAYIGDDLIDWPVMAQVGLSVAVA-DAH 169 (211)
T ss_dssp CCGGGEEEEECSGGGHHHHTTSSEEEECT-TSC
T ss_pred cCcceEEEEcCCHHHHHHHHHCCCEEEeC-Ccc
Confidence 78999999999999999999999999 664
|
| >3dnp_A Stress response protein YHAX; structural PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, unknown function; HET: MSE; 1.85A {Bacillus subtilis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.97 E-value=1.7e-09 Score=105.87 Aligned_cols=43 Identities=26% Similarity=0.376 Sum_probs=40.1
Q ss_pred cCCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCC
Q 044020 443 KDPVRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAKECGIL 485 (563)
Q Consensus 443 ~d~~~~~~~~~I~~l~~~gi~v~i~TGd~~~~a~~~a~~lgi~ 485 (563)
...+.+.+.++|++++++|++++++|||+...+..+.+.+|+.
T Consensus 21 ~~~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~~~~~ 63 (290)
T 3dnp_A 21 NGKIHQATKDAIEYVKKKGIYVTLVTNRHFRSAQKIAKSLKLD 63 (290)
T ss_dssp TSCCCHHHHHHHHHHHHTTCEEEEBCSSCHHHHHHHHHHTTCC
T ss_pred CCccCHHHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCC
Confidence 3468899999999999999999999999999999999999986
|
| >3pgv_A Haloacid dehalogenase-like hydrolase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: EPE; 2.39A {Klebsiella pneumoniae subsp} | Back alignment and structure |
|---|
Probab=98.96 E-value=1.9e-09 Score=105.39 Aligned_cols=43 Identities=23% Similarity=0.291 Sum_probs=40.0
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC
Q 044020 444 DPVRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAKECGILT 486 (563)
Q Consensus 444 d~~~~~~~~~I~~l~~~gi~v~i~TGd~~~~a~~~a~~lgi~~ 486 (563)
..+.+.++++|++++++|++++++|||+...+..+.+.+|+..
T Consensus 37 ~~i~~~~~~al~~l~~~G~~v~iaTGR~~~~~~~~~~~l~~~~ 79 (285)
T 3pgv_A 37 HFLTPYAKETLKLLTARGINFVFATGRHYIDVGQIRDNLGIRS 79 (285)
T ss_dssp SCCCHHHHHHHHHHHTTTCEEEEECSSCGGGGHHHHHHHCSCC
T ss_pred CcCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHhcCCCc
Confidence 4588999999999999999999999999999999999999863
|
| >3mmz_A Putative HAD family hydrolase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.84A {Streptomyces avermitilis} | Back alignment and structure |
|---|
Probab=98.96 E-value=1.3e-09 Score=98.29 Aligned_cols=82 Identities=18% Similarity=0.230 Sum_probs=71.2
Q ss_pred HHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCceeechhhhcCCCCCCCcceeEEEecChhhHHHHHHHHHHhcC
Q 044020 453 AVQTCLEAGITVRMVTGDNINTARAIAKECGILTSDGEAVEGPEFRNMSPADIIPKLQVMARSLPSDKHTLVTQLRNTFG 532 (563)
Q Consensus 453 ~I~~l~~~gi~v~i~TGd~~~~a~~~a~~lgi~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~~~~g 532 (563)
+|+.|+++|+++.++||++...+..+++.+|+. +|... ..|...++.+.+.+|
T Consensus 47 ~l~~L~~~g~~~~i~T~~~~~~~~~~~~~lgi~-------------------------~~~~~--~~k~~~l~~~~~~~~ 99 (176)
T 3mmz_A 47 GIAALRKSGLTMLILSTEQNPVVAARARKLKIP-------------------------VLHGI--DRKDLALKQWCEEQG 99 (176)
T ss_dssp HHHHHHHTTCEEEEEESSCCHHHHHHHHHHTCC-------------------------EEESC--SCHHHHHHHHHHHHT
T ss_pred HHHHHHHCCCeEEEEECcChHHHHHHHHHcCCe-------------------------eEeCC--CChHHHHHHHHHHcC
Confidence 899999999999999999999999999999985 34332 567777777776655
Q ss_pred ---CEEEEEcCCccCHHHHhhCCceEeecCCCC
Q 044020 533 ---EVVAVTGDGTNDASALHEADIGLAMGIAGT 562 (563)
Q Consensus 533 ---~~v~~iGDg~ND~~~l~~a~vgiamg~~~~ 562 (563)
+.++++||+.||++|++.||++++|+ ++.
T Consensus 100 ~~~~~~~~vGD~~nD~~~~~~ag~~v~~~-~~~ 131 (176)
T 3mmz_A 100 IAPERVLYVGNDVNDLPCFALVGWPVAVA-SAH 131 (176)
T ss_dssp CCGGGEEEEECSGGGHHHHHHSSEEEECT-TCC
T ss_pred CCHHHEEEEcCCHHHHHHHHHCCCeEECC-Chh
Confidence 78999999999999999999999998 664
|
| >4dw8_A Haloacid dehalogenase-like hydrolase; HAD, putative phosphatase, enzyme function initiative, EFI, structural genomics; 1.50A {Bacteroides thetaiotaomicron} PDB: 3niw_A 4dwo_A | Back alignment and structure |
|---|
Probab=98.91 E-value=4.3e-09 Score=102.35 Aligned_cols=42 Identities=17% Similarity=0.227 Sum_probs=39.3
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCC
Q 044020 444 DPVRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAKECGIL 485 (563)
Q Consensus 444 d~~~~~~~~~I~~l~~~gi~v~i~TGd~~~~a~~~a~~lgi~ 485 (563)
..+.+.+.++|++++++|++++++|||+...+..+.+.+|+.
T Consensus 21 ~~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~ 62 (279)
T 4dw8_A 21 KEISSRNRETLIRIQEQGIRLVLASGRPTYGIVPLANELRMN 62 (279)
T ss_dssp SCCCHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTGG
T ss_pred CccCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHhCCC
Confidence 468899999999999999999999999999999999999974
|
| >3mpo_A Predicted hydrolase of the HAD superfamily; SGX, PSI, structural genomics, protein structure initiative; 2.90A {Lactobacillus brevis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.89 E-value=5.8e-09 Score=101.42 Aligned_cols=43 Identities=21% Similarity=0.271 Sum_probs=38.1
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC
Q 044020 444 DPVRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAKECGILT 486 (563)
Q Consensus 444 d~~~~~~~~~I~~l~~~gi~v~i~TGd~~~~a~~~a~~lgi~~ 486 (563)
..+.+.+.++|++++++|++++++|||+...+..+.+.+|+..
T Consensus 21 ~~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~ 63 (279)
T 3mpo_A 21 NELAQATIDAVQAAKAQGIKVVLCTGRPLTGVQPYLDAMDIDG 63 (279)
T ss_dssp ---CHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCCS
T ss_pred CcCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCC
Confidence 4588999999999999999999999999999999999999863
|
| >2pq0_A Hypothetical conserved protein GK1056; hyopthetical protein, structural genomics, unknown function; 2.60A {Geobacillus kaustophilus} PDB: 2qyh_A | Back alignment and structure |
|---|
Probab=98.88 E-value=3.5e-09 Score=101.78 Aligned_cols=42 Identities=24% Similarity=0.258 Sum_probs=38.7
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCC
Q 044020 444 DPVRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAKECGIL 485 (563)
Q Consensus 444 d~~~~~~~~~I~~l~~~gi~v~i~TGd~~~~a~~~a~~lgi~ 485 (563)
..+.+.++++|++++++|++++++|||+...+..+.+++++.
T Consensus 19 ~~i~~~~~~al~~l~~~G~~~~~aTGR~~~~~~~~~~~l~~~ 60 (258)
T 2pq0_A 19 KQLPLSTIEAVRRLKQSGVYVAIATGRAPFMFEHVRKQLGID 60 (258)
T ss_dssp SCCCHHHHHHHHHHHHTTCEEEEECSSCGGGSHHHHHHHTCC
T ss_pred CccCHHHHHHHHHHHHCCCEEEEECCCChHHHHHHHHhcCCC
Confidence 458899999999999999999999999999999999999875
|
| >3dao_A Putative phosphatse; structural genomics, joint center for S genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE 1PE CIT; 1.80A {Eubacterium rectale} | Back alignment and structure |
|---|
Probab=98.85 E-value=2.1e-09 Score=104.98 Aligned_cols=41 Identities=10% Similarity=0.194 Sum_probs=38.0
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCC
Q 044020 445 PVRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAKECGIL 485 (563)
Q Consensus 445 ~~~~~~~~~I~~l~~~gi~v~i~TGd~~~~a~~~a~~lgi~ 485 (563)
.+.+.++++|++++++|++++++|||+...+..+.+.+++.
T Consensus 39 ~i~~~~~~al~~l~~~G~~v~iaTGR~~~~~~~~~~~l~~~ 79 (283)
T 3dao_A 39 LIDPEYMSVIDRLIDKGIIFVVCSGRQFSSEFKLFAPIKHK 79 (283)
T ss_dssp CCCHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHTGGGGGG
T ss_pred cCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCC
Confidence 58899999999999999999999999999999998888764
|
| >3n1u_A Hydrolase, HAD superfamily, subfamily III A; structural genomics, PSI-2; 1.80A {Legionella pneumophila} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.84 E-value=4.3e-09 Score=96.18 Aligned_cols=84 Identities=19% Similarity=0.270 Sum_probs=68.6
Q ss_pred HHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCceeechhhhcCCCCCCCcceeEEEecC--hhhHHHHHHHHHHh
Q 044020 453 AVQTCLEAGITVRMVTGDNINTARAIAKECGILTSDGEAVEGPEFRNMSPADIIPKLQVMARSL--PSDKHTLVTQLRNT 530 (563)
Q Consensus 453 ~I~~l~~~gi~v~i~TGd~~~~a~~~a~~lgi~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~--p~~K~~~v~~l~~~ 530 (563)
+|+.|+++|+++.++||++...+..+++.+|+.. +|.... |+....+++.++..
T Consensus 54 ~l~~L~~~g~~~~ivTn~~~~~~~~~l~~lgl~~------------------------~~~~~kpk~~~~~~~~~~~~~~ 109 (191)
T 3n1u_A 54 GLKLLMAAGIQVAIITTAQNAVVDHRMEQLGITH------------------------YYKGQVDKRSAYQHLKKTLGLN 109 (191)
T ss_dssp HHHHHHHTTCEEEEECSCCSHHHHHHHHHHTCCE------------------------EECSCSSCHHHHHHHHHHHTCC
T ss_pred HHHHHHHCCCeEEEEeCcChHHHHHHHHHcCCcc------------------------ceeCCCChHHHHHHHHHHhCCC
Confidence 5999999999999999999999999999999975 555542 33334444444433
Q ss_pred cCCEEEEEcCCccCHHHHhhCCceEeecCCCC
Q 044020 531 FGEVVAVTGDGTNDASALHEADIGLAMGIAGT 562 (563)
Q Consensus 531 ~g~~v~~iGDg~ND~~~l~~a~vgiamg~~~~ 562 (563)
++.+++|||+.||++|++.||++++|+ ++.
T Consensus 110 -~~~~~~vGD~~~Di~~~~~ag~~~~~~-~~~ 139 (191)
T 3n1u_A 110 -DDEFAYIGDDLPDLPLIQQVGLGVAVS-NAV 139 (191)
T ss_dssp -GGGEEEEECSGGGHHHHHHSSEEEECT-TCC
T ss_pred -HHHEEEECCCHHHHHHHHHCCCEEEeC-Ccc
Confidence 468999999999999999999999999 764
|
| >3e8m_A Acylneuraminate cytidylyltransferase; 2-keto-3-deoxynononic acid 9-phosphate phosphohydrolase, nucleotidyltransferase; HET: PEG PG4 EDO PGE; 1.10A {Bacteroides thetaiotaomicron} PDB: 3e84_A 3e81_A* | Back alignment and structure |
|---|
Probab=98.80 E-value=8.5e-09 Score=91.64 Aligned_cols=83 Identities=27% Similarity=0.327 Sum_probs=70.1
Q ss_pred HHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCceeechhhhcCCCCCCCcceeEEEecChhhHHHHHHHHHHhcC
Q 044020 453 AVQTCLEAGITVRMVTGDNINTARAIAKECGILTSDGEAVEGPEFRNMSPADIIPKLQVMARSLPSDKHTLVTQLRNTFG 532 (563)
Q Consensus 453 ~I~~l~~~gi~v~i~TGd~~~~a~~~a~~lgi~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~~~~g 532 (563)
+++.|+++|++++++||++...+..+++++|+.. +|... ..|...++.+.++++
T Consensus 39 ~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~gl~~------------------------~~~~~--kpk~~~~~~~~~~~~ 92 (164)
T 3e8m_A 39 GIFWAHNKGIPVGILTGEKTEIVRRRAEKLKVDY------------------------LFQGV--VDKLSAAEELCNELG 92 (164)
T ss_dssp HHHHHHHTTCCEEEECSSCCHHHHHHHHHTTCSE------------------------EECSC--SCHHHHHHHHHHHHT
T ss_pred HHHHHHHCCCEEEEEeCCChHHHHHHHHHcCCCE------------------------eeccc--CChHHHHHHHHHHcC
Confidence 8999999999999999999999999999999975 55544 445556655555544
Q ss_pred ---CEEEEEcCCccCHHHHhhCCceEeecCCCC
Q 044020 533 ---EVVAVTGDGTNDASALHEADIGLAMGIAGT 562 (563)
Q Consensus 533 ---~~v~~iGDg~ND~~~l~~a~vgiamg~~~~ 562 (563)
+.+++|||+.||++|++.||++++++ ++.
T Consensus 93 ~~~~~~~~vGD~~~Di~~~~~ag~~~~~~-~~~ 124 (164)
T 3e8m_A 93 INLEQVAYIGDDLNDAKLLKRVGIAGVPA-SAP 124 (164)
T ss_dssp CCGGGEEEECCSGGGHHHHTTSSEEECCT-TSC
T ss_pred CCHHHEEEECCCHHHHHHHHHCCCeEEcC-ChH
Confidence 68999999999999999999999998 664
|
| >1l7m_A Phosphoserine phosphatase; rossmann fold, four-helix bundle, B-hairpin, structural genomics, BSGC structure funded by NIH; 1.48A {Methanocaldococcus jannaschii} SCOP: c.108.1.4 PDB: 1f5s_A 1l7n_A 1l7p_A* 1l7o_A* 1j97_A* | Back alignment and structure |
|---|
Probab=98.79 E-value=1.1e-08 Score=94.34 Aligned_cols=105 Identities=19% Similarity=0.243 Sum_probs=75.2
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCcee-echhhhcCCCCCCCcceeEEEe-cChhhHHH
Q 044020 445 PVRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAKECGILTSDGEAV-EGPEFRNMSPADIIPKLQVMAR-SLPSDKHT 522 (563)
Q Consensus 445 ~~~~~~~~~I~~l~~~gi~v~i~TGd~~~~a~~~a~~lgi~~~~~~~~-~g~~~~~~~~~~~~~~~~v~~~-~~p~~K~~ 522 (563)
++.++++++++.++++|+++.++||+....+..+.+.+|+.......+ .... ... ..+..+ ..+..|..
T Consensus 76 ~l~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~-~~~~~~~~~~~~K~~ 146 (211)
T 1l7m_A 76 TPTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLGLDYAFANRLIVKDG--------KLT-GDVEGEVLKENAKGE 146 (211)
T ss_dssp CBCTTHHHHHHHHHHTTEEEEEEEEEEHHHHHHHHHHHTCSEEEEEEEEEETT--------EEE-EEEECSSCSTTHHHH
T ss_pred CCCccHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCCCeEEEeeeEEECC--------EEc-CCcccCccCCccHHH
Confidence 467899999999999999999999999998889999998853110000 0000 000 001111 12356777
Q ss_pred HHHHHHHhcC---CEEEEEcCCccCHHHHhhCCceEeec
Q 044020 523 LVTQLRNTFG---EVVAVTGDGTNDASALHEADIGLAMG 558 (563)
Q Consensus 523 ~v~~l~~~~g---~~v~~iGDg~ND~~~l~~a~vgiamg 558 (563)
.+..+.+++| ++++++||+.||++|++.||++++|+
T Consensus 147 ~l~~~~~~lgi~~~~~~~iGD~~~Di~~~~~ag~~~~~~ 185 (211)
T 1l7m_A 147 ILEKIAKIEGINLEDTVAVGDGANDISMFKKAGLKIAFC 185 (211)
T ss_dssp HHHHHHHHHTCCGGGEEEEECSGGGHHHHHHCSEEEEES
T ss_pred HHHHHHHHcCCCHHHEEEEecChhHHHHHHHCCCEEEEC
Confidence 7777766545 67999999999999999999999997
|
| >1u02_A Trehalose-6-phosphate phosphatase related protein; structural genomics, PSI; 1.92A {Thermoplasma acidophilum} SCOP: c.108.1.15 | Back alignment and structure |
|---|
Probab=98.75 E-value=4.4e-09 Score=99.86 Aligned_cols=113 Identities=14% Similarity=0.192 Sum_probs=76.8
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCC--CCCC-Cceee-chhh----------------hcCCC--
Q 044020 445 PVRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAKECGI--LTSD-GEAVE-GPEF----------------RNMSP-- 502 (563)
Q Consensus 445 ~~~~~~~~~I~~l~~~gi~v~i~TGd~~~~a~~~a~~lgi--~~~~-~~~~~-g~~~----------------~~~~~-- 502 (563)
.+.+.++++|++|+++| +|+++|||+...+..+.+.+ + ...+ ..+.. |+.+ ..+..
T Consensus 23 ~i~~~~~~al~~l~~~g-~v~iaTGR~~~~~~~~~~~l-~~~I~~nGa~i~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~ 100 (239)
T 1u02_A 23 YADAGLLSLISDLKERF-DTYIVTGRSPEEISRFLPLD-INMICYHGACSKINGQIVYNNGSDRFLGVFDRIYEDTRSWV 100 (239)
T ss_dssp CCCHHHHHHHHHHHHHS-EEEEECSSCHHHHHHHSCSS-CEEEEGGGTEEEETTEEEECTTGGGGHHHHHHHHHHHTTHH
T ss_pred CCCHHHHHHHHHHhcCC-CEEEEeCCCHHHHHHHhccc-hheEEECCEEEeeCCeeeecccccccchhhHHHHHHHHHHH
Confidence 57899999999999999 99999999999999888765 2 1111 11111 1110 00000
Q ss_pred ----C--------------CC---------------C---cceeE-----EEecChh--hHHHHHHHHHHhcCCEEEEEc
Q 044020 503 ----A--------------DI---------------I---PKLQV-----MARSLPS--DKHTLVTQLRNTFGEVVAVTG 539 (563)
Q Consensus 503 ----~--------------~~---------------~---~~~~v-----~~~~~p~--~K~~~v~~l~~~~g~~v~~iG 539 (563)
. .. + ....+ +.++.|. .|...++.+.+.+| |+++|
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~lei~~~~~~Kg~al~~l~~~~g--via~G 178 (239)
T 1u02_A 101 SDFPGLRIYRKNLAVLYHLGLMGADMKPKLRSRIEEIARIFGVETYYGKMIIELRVPGVNKGSAIRSVRGERP--AIIAG 178 (239)
T ss_dssp HHSTTCEEEEETTEEEEECTTSCSTTHHHHHHHHHHHHHHHTCEEEECSSEEEEECTTCCHHHHHHHHHTTSC--EEEEE
T ss_pred hhCCCcEEEecCCEEEEEcCCCChhHHHHHHHHHHHHhccCCcEEEeCCcEEEEEcCCCCHHHHHHHHHhhCC--eEEEe
Confidence 0 00 0 00111 1233343 68899999998877 99999
Q ss_pred CCccCHHHHhhC--CceEeecCCCC
Q 044020 540 DGTNDASALHEA--DIGLAMGIAGT 562 (563)
Q Consensus 540 Dg~ND~~~l~~a--~vgiamg~~~~ 562 (563)
|+.||++||+.| ++||||| ||.
T Consensus 179 D~~ND~~Ml~~a~~g~~vam~-Na~ 202 (239)
T 1u02_A 179 DDATDEAAFEANDDALTIKVG-EGE 202 (239)
T ss_dssp SSHHHHHHHHTTTTSEEEEES-SSC
T ss_pred CCCccHHHHHHhhCCcEEEEC-CCC
Confidence 999999999999 9999999 763
|
| >3n28_A Phosphoserine phosphatase; HAD family hydrolase, structural genomics, PSI, protein STRU initiative, nysgrc; 2.30A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=98.74 E-value=8.1e-09 Score=103.35 Aligned_cols=101 Identities=19% Similarity=0.272 Sum_probs=75.4
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCceeechhhhcCCCCCCCcceeEEE-----ecChhh
Q 044020 445 PVRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAKECGILTSDGEAVEGPEFRNMSPADIIPKLQVMA-----RSLPSD 519 (563)
Q Consensus 445 ~~~~~~~~~I~~l~~~gi~v~i~TGd~~~~a~~~a~~lgi~~~~~~~~~g~~~~~~~~~~~~~~~~v~~-----~~~p~~ 519 (563)
++.|++.++++.|+++|+++.++||+....+..+++++|+.......+.-.+ -.+.. -..+..
T Consensus 178 ~~~pg~~~~l~~L~~~g~~~~ivS~~~~~~~~~~~~~lgl~~~~~~~l~~~d------------~~~tg~~~~~~~~~kp 245 (335)
T 3n28_A 178 PLMPELPELVATLHAFGWKVAIASGGFTYFSDYLKEQLSLDYAQSNTLEIVS------------GKLTGQVLGEVVSAQT 245 (335)
T ss_dssp CCCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSEEEEEEEEEET------------TEEEEEEESCCCCHHH
T ss_pred CcCcCHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCCeEEeeeeEeeC------------CeeeeeecccccChhh
Confidence 6899999999999999999999999999999999999999641110000000 00000 012345
Q ss_pred HHHHHHHHHHhcC---CEEEEEcCCccCHHHHhhCCceEee
Q 044020 520 KHTLVTQLRNTFG---EVVAVTGDGTNDASALHEADIGLAM 557 (563)
Q Consensus 520 K~~~v~~l~~~~g---~~v~~iGDg~ND~~~l~~a~vgiam 557 (563)
|...++.+.+.+| +.++++||+.||++|++.||+|++|
T Consensus 246 k~~~~~~~~~~lgi~~~~~v~vGDs~nDi~~a~~aG~~va~ 286 (335)
T 3n28_A 246 KADILLTLAQQYDVEIHNTVAVGDGANDLVMMAAAGLGVAY 286 (335)
T ss_dssp HHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEE
T ss_pred hHHHHHHHHHHcCCChhhEEEEeCCHHHHHHHHHCCCeEEe
Confidence 6666666665544 6899999999999999999999999
|
| >3fzq_A Putative hydrolase; YP_001086940.1, putative haloacid dehalogenase-like hydrolas structural genomics, joint center for structural genomics; HET: MSE; 2.10A {Clostridium difficile} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.73 E-value=5.5e-09 Score=101.18 Aligned_cols=41 Identities=20% Similarity=0.308 Sum_probs=38.1
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCC
Q 044020 445 PVRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAKECGIL 485 (563)
Q Consensus 445 ~~~~~~~~~I~~l~~~gi~v~i~TGd~~~~a~~~a~~lgi~ 485 (563)
.+.+.+.++|++++++|++++++|||+...+..+.+.+|+.
T Consensus 22 ~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~~~~~ 62 (274)
T 3fzq_A 22 GIPESAKHAIRLCQKNHCSVVICTGRSMGTIQDDVLSLGVD 62 (274)
T ss_dssp BCCHHHHHHHHHHHHTTCEEEEECSSCTTTSCHHHHTTCCS
T ss_pred cCCHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHcCCC
Confidence 58899999999999999999999999999999999988875
|
| >2zos_A MPGP, mannosyl-3-phosphoglycerate phosphatase; haloacid dehalogenase like hydrolase, mannosylglycerate, cytoplasm, hydrolase, magnesium; 1.70A {Pyrococcus horikoshii} PDB: 1wzc_A | Back alignment and structure |
|---|
Probab=98.71 E-value=4.4e-08 Score=93.53 Aligned_cols=38 Identities=11% Similarity=0.107 Sum_probs=35.7
Q ss_pred cchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCC
Q 044020 448 PGVKEAVQTCLEAGITVRMVTGDNINTARAIAKECGIL 485 (563)
Q Consensus 448 ~~~~~~I~~l~~~gi~v~i~TGd~~~~a~~~a~~lgi~ 485 (563)
+.++++|++|+++|++++++|||+...+..+.+.+|+.
T Consensus 20 ~~~~~~l~~l~~~g~~~~i~Tgr~~~~~~~~~~~~~~~ 57 (249)
T 2zos_A 20 DPAKPIIEELKDMGFEIIFNSSKTRAEQEYYRKELEVE 57 (249)
T ss_dssp GGGHHHHHHHHHTTEEEEEBCSSCHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCC
Confidence 45999999999999999999999999999999999985
|
| >2r8e_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; YRBI, divalent metal, HAD superfamily, KDO 8-P, hydrolase; 1.40A {Escherichia coli O6} PDB: 2r8x_A 2r8y_A 2r8z_A 3hyc_A 3i6b_A* | Back alignment and structure |
|---|
Probab=98.71 E-value=2.3e-08 Score=91.12 Aligned_cols=83 Identities=20% Similarity=0.312 Sum_probs=69.7
Q ss_pred HHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCceeechhhhcCCCCCCCcceeEEEecChhhHHHHHHHHHHhcC
Q 044020 453 AVQTCLEAGITVRMVTGDNINTARAIAKECGILTSDGEAVEGPEFRNMSPADIIPKLQVMARSLPSDKHTLVTQLRNTFG 532 (563)
Q Consensus 453 ~I~~l~~~gi~v~i~TGd~~~~a~~~a~~lgi~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~~~~g 532 (563)
+|+.|+++|++++++||++...+..+++.+|+.. +|... ..|...++.+.+++|
T Consensus 61 ~l~~L~~~g~~v~ivT~~~~~~~~~~l~~lgl~~------------------------~~~~~--kpk~~~~~~~~~~~g 114 (188)
T 2r8e_A 61 GIRCALTSDIEVAIITGRKAKLVEDRCATLGITH------------------------LYQGQ--SNKLIAFSDLLEKLA 114 (188)
T ss_dssp HHHHHHTTTCEEEEECSSCCHHHHHHHHHHTCCE------------------------EECSC--SCSHHHHHHHHHHHT
T ss_pred HHHHHHHCCCeEEEEeCCChHHHHHHHHHcCCce------------------------eecCC--CCCHHHHHHHHHHcC
Confidence 8999999999999999999999999999999975 55443 345556666655545
Q ss_pred ---CEEEEEcCCccCHHHHhhCCceEeecCCCC
Q 044020 533 ---EVVAVTGDGTNDASALHEADIGLAMGIAGT 562 (563)
Q Consensus 533 ---~~v~~iGDg~ND~~~l~~a~vgiamg~~~~ 562 (563)
+.+++|||+.||++|++.||++++++ ++.
T Consensus 115 ~~~~~~~~iGD~~~Di~~a~~ag~~~~~~-~~~ 146 (188)
T 2r8e_A 115 IAPENVAYVGDDLIDWPVMEKVGLSVAVA-DAH 146 (188)
T ss_dssp CCGGGEEEEESSGGGHHHHTTSSEEEECT-TSC
T ss_pred CCHHHEEEECCCHHHHHHHHHCCCEEEec-CcC
Confidence 68999999999999999999999998 654
|
| >3r4c_A Hydrolase, haloacid dehalogenase-like hydrolase; haloalkanoate dehalogenase enzyme superfamily, phosphohydrol hydrolase; 1.82A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.69 E-value=9.4e-09 Score=99.30 Aligned_cols=44 Identities=32% Similarity=0.524 Sum_probs=39.5
Q ss_pred hhHHHHHHHHHHhcC---CEEEEEcCCccCHHHHhhCCceEeecCCCC
Q 044020 518 SDKHTLVTQLRNTFG---EVVAVTGDGTNDASALHEADIGLAMGIAGT 562 (563)
Q Consensus 518 ~~K~~~v~~l~~~~g---~~v~~iGDg~ND~~~l~~a~vgiamg~~~~ 562 (563)
..|...++.+.+++| +.++++||+.||++|++.||+||||| ||.
T Consensus 193 ~~K~~~l~~l~~~lgi~~~~~ia~GD~~NDi~m~~~ag~~vam~-na~ 239 (268)
T 3r4c_A 193 TSKATGLSLFADYYRVKVSEIMACGDGGNDIPMLKAAGIGVAMG-NAS 239 (268)
T ss_dssp CCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TSC
T ss_pred CCHHHHHHHHHHHcCCCHHHEEEECCcHHhHHHHHhCCCeEEeC-CCc
Confidence 368899999888866 57999999999999999999999999 875
|
| >2p9j_A Hypothetical protein AQ2171; secsg, riken, PSI, structural GENO protein structure initiative, southeast collaboratory for S genomics; 2.40A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=98.67 E-value=4.7e-08 Score=86.56 Aligned_cols=90 Identities=16% Similarity=0.253 Sum_probs=71.3
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCceeechhhhcCCCCCCCcceeEEEecChhhHHHHHH
Q 044020 446 VRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAKECGILTSDGEAVEGPEFRNMSPADIIPKLQVMARSLPSDKHTLVT 525 (563)
Q Consensus 446 ~~~~~~~~I~~l~~~gi~v~i~TGd~~~~a~~~a~~lgi~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~ 525 (563)
+.+++.++|+.|+++|++++++||++...+..+++++|+.. +|... ..|...++
T Consensus 37 ~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~------------------------~~~~~--kp~~~~~~ 90 (162)
T 2p9j_A 37 FNVLDGIGIKLLQKMGITLAVISGRDSAPLITRLKELGVEE------------------------IYTGS--YKKLEIYE 90 (162)
T ss_dssp EEHHHHHHHHHHHTTTCEEEEEESCCCHHHHHHHHHTTCCE------------------------EEECC----CHHHHH
T ss_pred ecccHHHHHHHHHHCCCEEEEEeCCCcHHHHHHHHHcCCHh------------------------hccCC--CCCHHHHH
Confidence 35678899999999999999999999999999999999874 55432 23344444
Q ss_pred HHHHhc---CCEEEEEcCCccCHHHHhhCCceEeecCCCC
Q 044020 526 QLRNTF---GEVVAVTGDGTNDASALHEADIGLAMGIAGT 562 (563)
Q Consensus 526 ~l~~~~---g~~v~~iGDg~ND~~~l~~a~vgiamg~~~~ 562 (563)
.+.+.+ .+.++++||+.||++|.+.||++++++ ++.
T Consensus 91 ~~~~~~~~~~~~~~~vGD~~~Di~~a~~ag~~~~~~-~~~ 129 (162)
T 2p9j_A 91 KIKEKYSLKDEEIGFIGDDVVDIEVMKKVGFPVAVR-NAV 129 (162)
T ss_dssp HHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TSC
T ss_pred HHHHHcCCCHHHEEEECCCHHHHHHHHHCCCeEEec-Ccc
Confidence 443333 367999999999999999999999997 653
|
| >3fvv_A Uncharacterized protein; unknown function, structural genomics, PSI,MCSG, protein STR initiative, midwest center for structural genomics; 2.10A {Bordetella pertussis} | Back alignment and structure |
|---|
Probab=98.66 E-value=1.1e-07 Score=89.37 Aligned_cols=105 Identities=20% Similarity=0.152 Sum_probs=76.3
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCceee-chhhhcCCCCCCCcceeEE-EecChhhHHH
Q 044020 445 PVRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAKECGILTSDGEAVE-GPEFRNMSPADIIPKLQVM-ARSLPSDKHT 522 (563)
Q Consensus 445 ~~~~~~~~~I~~l~~~gi~v~i~TGd~~~~a~~~a~~lgi~~~~~~~~~-g~~~~~~~~~~~~~~~~v~-~~~~p~~K~~ 522 (563)
.+.|++.+.++.|+++|++++++||.....+..+++.+|+.......+. .... +. -.+. .......|..
T Consensus 92 ~~~~g~~~~l~~l~~~g~~~~ivS~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~--------~~-g~~~~~~~~~~~K~~ 162 (232)
T 3fvv_A 92 SLTVQAVDVVRGHLAAGDLCALVTATNSFVTAPIARAFGVQHLIATDPEYRDGR--------YT-GRIEGTPSFREGKVV 162 (232)
T ss_dssp GCCHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCCEEEECEEEEETTE--------EE-EEEESSCSSTHHHHH
T ss_pred hcCHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCEEEEcceEEECCE--------Ee-eeecCCCCcchHHHH
Confidence 4799999999999999999999999999999999999998631000000 0000 00 0001 1122456777
Q ss_pred HHHHHHHhcC------CEEEEEcCCccCHHHHhhCCceEeec
Q 044020 523 LVTQLRNTFG------EVVAVTGDGTNDASALHEADIGLAMG 558 (563)
Q Consensus 523 ~v~~l~~~~g------~~v~~iGDg~ND~~~l~~a~vgiamg 558 (563)
.++.+.+.+| +.++++||+.||++|++.||+++++.
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~vGDs~~D~~~~~~ag~~~~~~ 204 (232)
T 3fvv_A 163 RVNQWLAGMGLALGDFAESYFYSDSVNDVPLLEAVTRPIAAN 204 (232)
T ss_dssp HHHHHHHHTTCCGGGSSEEEEEECCGGGHHHHHHSSEEEEES
T ss_pred HHHHHHHHcCCCcCchhheEEEeCCHhhHHHHHhCCCeEEEC
Confidence 7776665545 68999999999999999999999985
|
| >3l7y_A Putative uncharacterized protein SMU.1108C; hydrolase; 2.00A {Streptococcus mutans} | Back alignment and structure |
|---|
Probab=98.66 E-value=2.4e-08 Score=98.38 Aligned_cols=44 Identities=27% Similarity=0.319 Sum_probs=39.6
Q ss_pred hhHHHHHHHHHHhcC---CEEEEEcCCccCHHHHhhCCceEeecCCCC
Q 044020 518 SDKHTLVTQLRNTFG---EVVAVTGDGTNDASALHEADIGLAMGIAGT 562 (563)
Q Consensus 518 ~~K~~~v~~l~~~~g---~~v~~iGDg~ND~~~l~~a~vgiamg~~~~ 562 (563)
..|...++.+.+++| +.+++|||+.||++|++.||+||||| ||.
T Consensus 227 ~~K~~al~~l~~~lgi~~~e~i~~GDs~NDi~m~~~ag~~vam~-na~ 273 (304)
T 3l7y_A 227 LHKGWALQQLLKRWNFTSDHLMAFGDGGNDIEMLKLAKYSYAMA-NAP 273 (304)
T ss_dssp CSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHCTEEEECT-TSC
T ss_pred CCHHHHHHHHHHHhCcCHHHEEEECCCHHHHHHHHhcCCeEEcC-CcC
Confidence 468889999988766 67999999999999999999999999 875
|
| >1wr8_A Phosphoglycolate phosphatase; alpha / beta core domain, HAD superfamily, structural genomi structural genomics/proteomics initiative, RSGI; 1.60A {Pyrococcus horikoshii} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.65 E-value=8.1e-08 Score=90.53 Aligned_cols=117 Identities=21% Similarity=0.276 Sum_probs=81.9
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCceeechh----------------------hh-cC
Q 044020 444 DPVRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAKECGILTSDGEAVEGPE----------------------FR-NM 500 (563)
Q Consensus 444 d~~~~~~~~~I~~l~~~gi~v~i~TGd~~~~a~~~a~~lgi~~~~~~~~~g~~----------------------~~-~~ 500 (563)
..+.+.+.+++++++++|++++++|||+...+..+.+.+|+..+ ....+|.. +. ..
T Consensus 19 ~~i~~~~~~al~~l~~~G~~v~i~TGR~~~~~~~~~~~l~~~~~-~i~~nGa~i~~~~~~~~~~~l~~~~~i~~~~~~~~ 97 (231)
T 1wr8_A 19 RMIHEKALEAIRRAESLGIPIMLVTGNTVQFAEAASILIGTSGP-VVAEDGGAISYKKKRIFLASMDEEWILWNEIRKRF 97 (231)
T ss_dssp SCBCHHHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHHTCCSC-EEEGGGTEEEETTEEEESCCCSHHHHHHHHHHHHC
T ss_pred CcCCHHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHcCCCCe-EEEeCCcEEEeCCEEEEeccHHHHHHHHHHHHHhC
Confidence 45788999999999999999999999999999999999998542 11111100 00 00
Q ss_pred ---C---------------C---C---------CCCcceeEE-----EecCh--hhHHHHHHHHHHhcC---CEEEEEcC
Q 044020 501 ---S---------------P---A---------DIIPKLQVM-----ARSLP--SDKHTLVTQLRNTFG---EVVAVTGD 540 (563)
Q Consensus 501 ---~---------------~---~---------~~~~~~~v~-----~~~~p--~~K~~~v~~l~~~~g---~~v~~iGD 540 (563)
. . . ..-....+. .+..| ..|...++.+.+++| +.++++||
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ei~~~~~~K~~~~~~~~~~~~~~~~~~~~iGD 177 (231)
T 1wr8_A 98 PNARTSYTMPDRRAGLVIMRETINVETVREIINELNLNLVAVDSGFAIHVKKPWINKGSGIEKASEFLGIKPKEVAHVGD 177 (231)
T ss_dssp TTCCBCTTGGGCSSCEEECTTTSCHHHHHHHHHHTTCSCEEEECSSCEEEECTTCCHHHHHHHHHHHHTSCGGGEEEEEC
T ss_pred CCceEEecCCCceeeEEEECCCCCHHHHHHHHHhcCCcEEEEecCcEEEEecCCCChHHHHHHHHHHcCCCHHHEEEECC
Confidence 0 0 0 000012222 12223 368888888877655 57999999
Q ss_pred CccCHHHHhhCCceEeecCCCC
Q 044020 541 GTNDASALHEADIGLAMGIAGT 562 (563)
Q Consensus 541 g~ND~~~l~~a~vgiamg~~~~ 562 (563)
+.||++|++.||++++|+ |+.
T Consensus 178 ~~nD~~~~~~ag~~v~~~-~~~ 198 (231)
T 1wr8_A 178 GENDLDAFKVVGYKVAVA-QAP 198 (231)
T ss_dssp SGGGHHHHHHSSEEEECT-TSC
T ss_pred CHHHHHHHHHcCCeEEec-CCC
Confidence 999999999999999999 764
|
| >1rkq_A Hypothetical protein YIDA; two domain structure with beta-alpha sandwich. stucture contains A magnesium ION., PSI, protein structure initiative; 1.40A {Escherichia coli} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.64 E-value=4.6e-08 Score=95.25 Aligned_cols=43 Identities=23% Similarity=0.349 Sum_probs=39.8
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC
Q 044020 444 DPVRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAKECGILT 486 (563)
Q Consensus 444 d~~~~~~~~~I~~l~~~gi~v~i~TGd~~~~a~~~a~~lgi~~ 486 (563)
..+.+.++++|++++++|++++++|||+...+..+.+++++..
T Consensus 21 ~~i~~~~~~aL~~l~~~Gi~vviaTGR~~~~~~~~~~~l~l~~ 63 (282)
T 1rkq_A 21 HTISPAVKNAIAAARARGVNVVLTTGRPYAGVHNYLKELHMEQ 63 (282)
T ss_dssp SCCCHHHHHHHHHHHHTTCEEEEECSSCGGGTHHHHHHTTCCS
T ss_pred CcCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHhCCCC
Confidence 4588999999999999999999999999999999999999863
|
| >4ap9_A Phosphoserine phosphatase; hydrolase, haloacid dehalogenase superfamily, NDSB; HET: 1PS; 1.78A {Thermococcus onnurineus} PDB: 4b6j_A | Back alignment and structure |
|---|
Probab=98.64 E-value=1.3e-08 Score=93.07 Aligned_cols=101 Identities=26% Similarity=0.315 Sum_probs=77.2
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCceeechhhhcCCCCCCCcceeEEEecChhhHHHHH
Q 044020 445 PVRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAKECGILTSDGEAVEGPEFRNMSPADIIPKLQVMARSLPSDKHTLV 524 (563)
Q Consensus 445 ~~~~~~~~~I~~l~~~gi~v~i~TGd~~~~a~~~a~~lgi~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v 524 (563)
++.|++.+.++.|++.|++++++|+.+...+..+ +.+|+......+..... ...-....|..|...+
T Consensus 79 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~-~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~k~~~l 145 (201)
T 4ap9_A 79 NVSPEARELVETLREKGFKVVLISGSFEEVLEPF-KELGDEFMANRAIFEDG------------KFQGIRLRFRDKGEFL 145 (201)
T ss_dssp CCCHHHHHHHHHHHHTTCEEEEEEEEETTTSGGG-TTTSSEEEEEEEEEETT------------EEEEEECCSSCHHHHH
T ss_pred CCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHH-HHcCchhheeeEEeeCC------------ceECCcCCccCHHHHH
Confidence 6899999999999999999999999988888888 88887532000000000 0001344567799988
Q ss_pred HHHHHhcCCEEEEEcCCccCHHHHhhCCceEeecCCCC
Q 044020 525 TQLRNTFGEVVAVTGDGTNDASALHEADIGLAMGIAGT 562 (563)
Q Consensus 525 ~~l~~~~g~~v~~iGDg~ND~~~l~~a~vgiamg~~~~ 562 (563)
+.+ . .+.+++|||+.||++|++.||++++|+ ++.
T Consensus 146 ~~l--~-~~~~i~iGD~~~Di~~~~~ag~~v~~~-~~~ 179 (201)
T 4ap9_A 146 KRF--R-DGFILAMGDGYADAKMFERADMGIAVG-REI 179 (201)
T ss_dssp GGG--T-TSCEEEEECTTCCHHHHHHCSEEEEES-SCC
T ss_pred Hhc--C-cCcEEEEeCCHHHHHHHHhCCceEEEC-CCC
Confidence 888 4 678999999999999999999999999 764
|
| >3m1y_A Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, phophoserine phosphatase, protein structure initiative, structural genomics; 2.40A {Helicobacter pylori} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.63 E-value=6.1e-08 Score=90.01 Aligned_cols=107 Identities=19% Similarity=0.144 Sum_probs=77.2
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCceeechhhhcCCCCCCCcceeEEEe-cChhhHHH
Q 044020 444 DPVRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAKECGILTSDGEAVEGPEFRNMSPADIIPKLQVMAR-SLPSDKHT 522 (563)
Q Consensus 444 d~~~~~~~~~I~~l~~~gi~v~i~TGd~~~~a~~~a~~lgi~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~-~~p~~K~~ 522 (563)
-++.|++.+.++.|+++|+++.++|+.....+..+.+.+|+......++...+-. ....+... .....|..
T Consensus 74 ~~~~~~~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~gl~~~f~~~~~~~~~~--------~~~~~~~~~~~~k~k~~ 145 (217)
T 3m1y_A 74 LPLFEGALELVSALKEKNYKVVCFSGGFDLATNHYRDLLHLDAAFSNTLIVENDA--------LNGLVTGHMMFSHSKGE 145 (217)
T ss_dssp CCBCBTHHHHHHHHHTTTEEEEEEEEEEHHHHHHHHHHHTCSEEEEEEEEEETTE--------EEEEEEESCCSTTHHHH
T ss_pred CcCCCCHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHHcCcchhccceeEEeCCE--------EEeeeccCCCCCCChHH
Confidence 4588999999999999999999999999999999999999875211111110000 00000011 12356777
Q ss_pred HHHHHHHhcC---CEEEEEcCCccCHHHHhhCCceEeec
Q 044020 523 LVTQLRNTFG---EVVAVTGDGTNDASALHEADIGLAMG 558 (563)
Q Consensus 523 ~v~~l~~~~g---~~v~~iGDg~ND~~~l~~a~vgiamg 558 (563)
.++.+.+.+| +.+++|||+.||++|++.||++++|.
T Consensus 146 ~~~~~~~~~g~~~~~~i~vGDs~~Di~~a~~aG~~~~~~ 184 (217)
T 3m1y_A 146 MLLVLQRLLNISKTNTLVVGDGANDLSMFKHAHIKIAFN 184 (217)
T ss_dssp HHHHHHHHHTCCSTTEEEEECSGGGHHHHTTCSEEEEES
T ss_pred HHHHHHHHcCCCHhHEEEEeCCHHHHHHHHHCCCeEEEC
Confidence 7777766544 68999999999999999999999993
|
| >3zx4_A MPGP, mannosyl-3-phosphoglycerate phosphatase; hydrolase, haloalkanoid acid dehalogenase-like phosphatase, crystallographic snapshot; HET: 2M8; 1.74A {Thermus thermophilus} PDB: 3zty_A 3zu6_A* 3ztw_A* 3zw7_A* 3zwd_A* 3zwk_A 3zup_A* 3zx5_A* | Back alignment and structure |
|---|
Probab=98.62 E-value=6.9e-08 Score=92.72 Aligned_cols=45 Identities=27% Similarity=0.429 Sum_probs=40.5
Q ss_pred hhHHHHHHHHHHhcC-----CEEEEEcCCccCHHHHhhCCceEeecCCCCC
Q 044020 518 SDKHTLVTQLRNTFG-----EVVAVTGDGTNDASALHEADIGLAMGIAGTE 563 (563)
Q Consensus 518 ~~K~~~v~~l~~~~g-----~~v~~iGDg~ND~~~l~~a~vgiamg~~~~~ 563 (563)
..|...++.+.+++| +.++++||+.||++|++.|++|+||| ||.+
T Consensus 175 ~~K~~~l~~l~~~~~i~~~~~~~~~~GD~~nD~~m~~~ag~~va~~-na~~ 224 (259)
T 3zx4_A 175 ADKGRAVARLRALWPDPEEARFAVGLGDSLNDLPLFRAVDLAVYVG-RGDP 224 (259)
T ss_dssp CCHHHHHHHHHHTCSSHHHHTSEEEEESSGGGHHHHHTSSEEEECS-SSCC
T ss_pred CCHHHHHHHHHHHhCCCCCCceEEEEeCCHHHHHHHHhCCCeEEeC-Chhh
Confidence 578999999988766 78999999999999999999999999 8764
|
| >4eze_A Haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 2.27A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=98.61 E-value=8.6e-08 Score=94.74 Aligned_cols=106 Identities=17% Similarity=0.229 Sum_probs=76.1
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCceeechhhhcCCCCCCCcceeEEE-ecChhhHHHH
Q 044020 445 PVRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAKECGILTSDGEAVEGPEFRNMSPADIIPKLQVMA-RSLPSDKHTL 523 (563)
Q Consensus 445 ~~~~~~~~~I~~l~~~gi~v~i~TGd~~~~a~~~a~~lgi~~~~~~~~~g~~~~~~~~~~~~~~~~v~~-~~~p~~K~~~ 523 (563)
++.|++.+.++.|+++|++++++||.....+..+++.+|+......++...+-. +. -.+.. ...+..|..+
T Consensus 179 ~l~pg~~e~L~~Lk~~G~~v~IvSn~~~~~~~~~l~~lgl~~~f~~~l~~~dg~-------~t-g~i~~~~~~~kpkp~~ 250 (317)
T 4eze_A 179 TLSPGLLTILPVIKAKGFKTAIISGGLDIFTQRLKARYQLDYAFSNTVEIRDNV-------LT-DNITLPIMNAANKKQT 250 (317)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSEEEEECEEEETTE-------EE-EEECSSCCCHHHHHHH
T ss_pred EECcCHHHHHHHHHhCCCEEEEEeCccHHHHHHHHHHcCCCeEEEEEEEeeCCe-------ee-eeEecccCCCCCCHHH
Confidence 388999999999999999999999999999999999999975211111000000 00 00000 0123566677
Q ss_pred HHHHHHhcC---CEEEEEcCCccCHHHHhhCCceEeec
Q 044020 524 VTQLRNTFG---EVVAVTGDGTNDASALHEADIGLAMG 558 (563)
Q Consensus 524 v~~l~~~~g---~~v~~iGDg~ND~~~l~~a~vgiamg 558 (563)
++.+.+.+| +.+++|||+.||++|++.||++++++
T Consensus 251 ~~~~~~~lgv~~~~~i~VGDs~~Di~aa~~AG~~va~~ 288 (317)
T 4eze_A 251 LVDLAARLNIATENIIACGDGANDLPMLEHAGTGIAWK 288 (317)
T ss_dssp HHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEES
T ss_pred HHHHHHHcCCCcceEEEEeCCHHHHHHHHHCCCeEEeC
Confidence 766665544 68999999999999999999999995
|
| >1xvi_A MPGP, YEDP, putative mannosyl-3-phosphoglycerate phosphatase; hypothetical protein, conserved protein, phophatase-like domain; HET: 1PE PG4 PGE; 2.26A {Escherichia coli K12} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.57 E-value=4.1e-07 Score=88.10 Aligned_cols=43 Identities=12% Similarity=0.037 Sum_probs=38.9
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC
Q 044020 444 DPVRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAKECGILT 486 (563)
Q Consensus 444 d~~~~~~~~~I~~l~~~gi~v~i~TGd~~~~a~~~a~~lgi~~ 486 (563)
..+.+.++++|++|+++|++++++|||+...+..+.+++++..
T Consensus 25 ~~~~~~~~~~l~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~ 67 (275)
T 1xvi_A 25 SYDWQPAAPWLTRLREANVPVILCSSKTSAEMLYLQKTLGLQG 67 (275)
T ss_dssp CCSCCTTHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHTTCTT
T ss_pred CcCCHHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCC
Confidence 3466789999999999999999999999999999999999864
|
| >3m9l_A Hydrolase, haloacid dehalogenase-like family; HAD family hydrolase, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Pseudomonas fluorescens} PDB: 2ybd_A* 3r09_A* | Back alignment and structure |
|---|
Probab=98.56 E-value=5.2e-08 Score=89.79 Aligned_cols=99 Identities=15% Similarity=0.175 Sum_probs=73.4
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCC--CceeechhhhcCCCCCCCcceeEEEecChhhHHH
Q 044020 445 PVRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAKECGILTSD--GEAVEGPEFRNMSPADIIPKLQVMARSLPSDKHT 522 (563)
Q Consensus 445 ~~~~~~~~~I~~l~~~gi~v~i~TGd~~~~a~~~a~~lgi~~~~--~~~~~g~~~~~~~~~~~~~~~~v~~~~~p~~K~~ 522 (563)
.+.+++.+.++.|++.|++++++|+.....+....+.+|+.... ..++.+.. .. ...|..
T Consensus 70 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~i~~~~~--------------~~----~kp~~~ 131 (205)
T 3m9l_A 70 RPAPGAVELVRELAGRGYRLGILTRNARELAHVTLEAIGLADCFAEADVLGRDE--------------AP----PKPHPG 131 (205)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGSCGGGEECTTT--------------SC----CTTSSH
T ss_pred CCCccHHHHHHHHHhcCCeEEEEeCCchHHHHHHHHHcCchhhcCcceEEeCCC--------------CC----CCCCHH
Confidence 36789999999999999999999999999999999999986432 22222211 00 111223
Q ss_pred HHHHHHHhcC---CEEEEEcCCccCHHHHhhCCc-eEeecCCCC
Q 044020 523 LVTQLRNTFG---EVVAVTGDGTNDASALHEADI-GLAMGIAGT 562 (563)
Q Consensus 523 ~v~~l~~~~g---~~v~~iGDg~ND~~~l~~a~v-giamg~~~~ 562 (563)
.++.+.+.+| +.+++|||+.||+.|.+.||+ +|+|+ ++.
T Consensus 132 ~~~~~~~~~g~~~~~~i~iGD~~~Di~~a~~aG~~~i~v~-~~~ 174 (205)
T 3m9l_A 132 GLLKLAEAWDVSPSRMVMVGDYRFDLDCGRAAGTRTVLVN-LPD 174 (205)
T ss_dssp HHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEECS-SSS
T ss_pred HHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCCEEEEEe-CCC
Confidence 3444443333 789999999999999999999 99999 664
|
| >2b30_A Pvivax hypothetical protein; SGPP, structural genomics, PSI, protein structure initiative; 2.70A {Plasmodium vivax} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.55 E-value=1.5e-07 Score=92.47 Aligned_cols=42 Identities=17% Similarity=0.151 Sum_probs=38.7
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHH--HHcC-CC
Q 044020 444 DPVRPGVKEAVQTCLEAGITVRMVTGDNINTARAIA--KECG-IL 485 (563)
Q Consensus 444 d~~~~~~~~~I~~l~~~gi~v~i~TGd~~~~a~~~a--~~lg-i~ 485 (563)
..+.+.++++|++|+++|++++++|||+...+..+. ++++ +.
T Consensus 44 ~~is~~~~~al~~l~~~Gi~v~iaTGR~~~~~~~~~~~~~l~~~~ 88 (301)
T 2b30_A 44 IKVPSENIDAIKEAIEKGYMVSICTGRSKVGILSAFGEENLKKMN 88 (301)
T ss_dssp TCSCHHHHHHHHHHHHHTCEEEEECSSCHHHHHHHHCHHHHHHHT
T ss_pred CccCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHhhHHhhcccc
Confidence 458899999999999999999999999999999999 8888 65
|
| >4ex6_A ALNB; modified rossman fold, phosphatase, magnesium binding, hydro; 1.25A {Streptomyces SP} PDB: 4ex7_A | Back alignment and structure |
|---|
Probab=98.55 E-value=6e-08 Score=91.39 Aligned_cols=100 Identities=27% Similarity=0.307 Sum_probs=75.4
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCceeechhhhcCCCCCCCcceeEEEecChhhHHHHH
Q 044020 445 PVRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAKECGILTSDGEAVEGPEFRNMSPADIIPKLQVMARSLPSDKHTLV 524 (563)
Q Consensus 445 ~~~~~~~~~I~~l~~~gi~v~i~TGd~~~~a~~~a~~lgi~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v 524 (563)
.+.+++.+.++.|++.|++++++|+.....+..+.+.+|+......++.+.... .....|+--..++
T Consensus 104 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~-------------~~kp~~~~~~~~~ 170 (237)
T 4ex6_A 104 LLYPGVLEGLDRLSAAGFRLAMATSKVEKAARAIAELTGLDTRLTVIAGDDSVE-------------RGKPHPDMALHVA 170 (237)
T ss_dssp GBCTTHHHHHHHHHHTTEEEEEECSSCHHHHHHHHHHHTGGGTCSEEECTTTSS-------------SCTTSSHHHHHHH
T ss_pred ccCCCHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCchhheeeEEeCCCCC-------------CCCCCHHHHHHHH
Confidence 367899999999999999999999999999999999999875444444433211 0111233334444
Q ss_pred HHHHHhcCCEEEEEcCCccCHHHHhhCCc---eEeec
Q 044020 525 TQLRNTFGEVVAVTGDGTNDASALHEADI---GLAMG 558 (563)
Q Consensus 525 ~~l~~~~g~~v~~iGDg~ND~~~l~~a~v---giamg 558 (563)
+.+... .+.+++|||+.||+.|++.||+ +|+||
T Consensus 171 ~~lg~~-~~~~i~vGD~~~Di~~a~~aG~~~i~v~~g 206 (237)
T 4ex6_A 171 RGLGIP-PERCVVIGDGVPDAEMGRAAGMTVIGVSYG 206 (237)
T ss_dssp HHHTCC-GGGEEEEESSHHHHHHHHHTTCEEEEESSS
T ss_pred HHcCCC-HHHeEEEcCCHHHHHHHHHCCCeEEEEecC
Confidence 444443 4789999999999999999999 99998
|
| >3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=98.54 E-value=1.3e-07 Score=97.51 Aligned_cols=99 Identities=23% Similarity=0.362 Sum_probs=77.7
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCce---eechhhhcCCCCCCCcceeEEEe-----cC
Q 044020 445 PVRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAKECGILTSDGEA---VEGPEFRNMSPADIIPKLQVMAR-----SL 516 (563)
Q Consensus 445 ~~~~~~~~~I~~l~~~gi~v~i~TGd~~~~a~~~a~~lgi~~~~~~~---~~g~~~~~~~~~~~~~~~~v~~~-----~~ 516 (563)
++.|++.+.++.|+++|+++.++||.....+..+++.+|+....... .+|. +..+ ..
T Consensus 256 ~~~pg~~e~l~~Lk~~G~~~~ivS~~~~~~~~~~~~~lgl~~~~~~~l~~~dg~---------------~tg~~~~~v~~ 320 (415)
T 3p96_A 256 ELMPGARTTLRTLRRLGYACGVVSGGFRRIIEPLAEELMLDYVAANELEIVDGT---------------LTGRVVGPIID 320 (415)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCSEEEEECEEEETTE---------------EEEEECSSCCC
T ss_pred ccCccHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCccceeeeeEEEeCCE---------------EEeeEccCCCC
Confidence 68999999999999999999999999999999999999996411100 0000 1111 12
Q ss_pred hhhHHHHHHHHHHhcC---CEEEEEcCCccCHHHHhhCCceEeec
Q 044020 517 PSDKHTLVTQLRNTFG---EVVAVTGDGTNDASALHEADIGLAMG 558 (563)
Q Consensus 517 p~~K~~~v~~l~~~~g---~~v~~iGDg~ND~~~l~~a~vgiamg 558 (563)
+..|..+++.+.+.+| +.+++|||+.||++|++.||+|+++.
T Consensus 321 ~kpk~~~~~~~~~~~gi~~~~~i~vGD~~~Di~~a~~aG~~va~~ 365 (415)
T 3p96_A 321 RAGKATALREFAQRAGVPMAQTVAVGDGANDIDMLAAAGLGIAFN 365 (415)
T ss_dssp HHHHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEES
T ss_pred CcchHHHHHHHHHHcCcChhhEEEEECCHHHHHHHHHCCCeEEEC
Confidence 5677788877776655 68999999999999999999999994
|
| >1rku_A Homoserine kinase; phosphoserine phosphatase, phosphoserine:homoserine phosphotransferase, THRH, phosphoserine phosphoryl donor; 1.47A {Pseudomonas aeruginosa} SCOP: c.108.1.11 PDB: 1rkv_A | Back alignment and structure |
|---|
Probab=98.50 E-value=5.1e-07 Score=83.07 Aligned_cols=102 Identities=19% Similarity=0.134 Sum_probs=80.6
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCC-CceeechhhhcCCCCCCCcceeEEEecChhhHHHH
Q 044020 445 PVRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAKECGILTSD-GEAVEGPEFRNMSPADIIPKLQVMARSLPSDKHTL 523 (563)
Q Consensus 445 ~~~~~~~~~I~~l~~~gi~v~i~TGd~~~~a~~~a~~lgi~~~~-~~~~~g~~~~~~~~~~~~~~~~v~~~~~p~~K~~~ 523 (563)
++.|++.+.++.|++. ++++++|+.+...+..+++.+|+.... ..+..+.+.. ....-...|..|...
T Consensus 69 ~~~~g~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~~gl~~~f~~~~~~~~~~~----------~~~~~~p~p~~~~~~ 137 (206)
T 1rku_A 69 KPLEGAVEFVDWLRER-FQVVILSDTFYEFSQPLMRQLGFPTLLCHKLEIDDSDR----------VVGYQLRQKDPKRQS 137 (206)
T ss_dssp CCCTTHHHHHHHHHTT-SEEEEEEEEEHHHHHHHHHHTTCCCEEEEEEEECTTSC----------EEEEECCSSSHHHHH
T ss_pred CCCccHHHHHHHHHhc-CcEEEEECChHHHHHHHHHHcCCcceecceeEEcCCce----------EEeeecCCCchHHHH
Confidence 4789999999999999 999999999999999999999987522 1122221110 000112567889999
Q ss_pred HHHHHHhcCCEEEEEcCCccCHHHHhhCCceEeec
Q 044020 524 VTQLRNTFGEVVAVTGDGTNDASALHEADIGLAMG 558 (563)
Q Consensus 524 v~~l~~~~g~~v~~iGDg~ND~~~l~~a~vgiamg 558 (563)
++.+... ++.+++|||+.||++|.+.||++++|.
T Consensus 138 l~~l~~~-~~~~~~iGD~~~Di~~a~~aG~~~~~~ 171 (206)
T 1rku_A 138 VIAFKSL-YYRVIAAGDSYNDTTMLSEAHAGILFH 171 (206)
T ss_dssp HHHHHHT-TCEEEEEECSSTTHHHHHHSSEEEEES
T ss_pred HHHHHhc-CCEEEEEeCChhhHHHHHhcCccEEEC
Confidence 9999887 889999999999999999999999985
|
| >1te2_A Putative phosphatase; structural genomics, phosphates, PSI, protein S initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Escherichia coli} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=98.47 E-value=2.3e-07 Score=86.32 Aligned_cols=98 Identities=17% Similarity=0.222 Sum_probs=70.2
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCceeechhhhcCCCCCCCcceeEEEecChhhHHHHHH
Q 044020 446 VRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAKECGILTSDGEAVEGPEFRNMSPADIIPKLQVMARSLPSDKHTLVT 525 (563)
Q Consensus 446 ~~~~~~~~I~~l~~~gi~v~i~TGd~~~~a~~~a~~lgi~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~ 525 (563)
+.+++.+.++.+++.|++++++|+.....+....+.+|+......++.+.... .....|.....+++
T Consensus 95 ~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~-------------~~kp~~~~~~~~~~ 161 (226)
T 1te2_A 95 LLPGVREAVALCKEQGLLVGLASASPLHMLEKVLTMFDLRDSFDALASAEKLP-------------YSKPHPQVYLDCAA 161 (226)
T ss_dssp BCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSEEEECTTSS-------------CCTTSTHHHHHHHH
T ss_pred cCccHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhcCcHhhCcEEEeccccC-------------CCCCChHHHHHHHH
Confidence 56889999999999999999999999988899999998864332222222110 00011222333444
Q ss_pred HHHHhcCCEEEEEcCCccCHHHHhhCCceEee
Q 044020 526 QLRNTFGEVVAVTGDGTNDASALHEADIGLAM 557 (563)
Q Consensus 526 ~l~~~~g~~v~~iGDg~ND~~~l~~a~vgiam 557 (563)
.++-. .+.+++|||+.||++|++.||++++|
T Consensus 162 ~~~i~-~~~~i~iGD~~nDi~~a~~aG~~~~~ 192 (226)
T 1te2_A 162 KLGVD-PLTCVALEDSVNGMIASKAARMRSIV 192 (226)
T ss_dssp HHTSC-GGGEEEEESSHHHHHHHHHTTCEEEE
T ss_pred HcCCC-HHHeEEEeCCHHHHHHHHHcCCEEEE
Confidence 44333 46899999999999999999999999
|
| >1rlm_A Phosphatase; HAD family, rossman fold, hydrolase; 1.90A {Escherichia coli} SCOP: c.108.1.10 PDB: 1rlt_A 1rlo_A* 2hf2_A | Back alignment and structure |
|---|
Probab=98.46 E-value=3.3e-07 Score=88.57 Aligned_cols=43 Identities=30% Similarity=0.428 Sum_probs=37.7
Q ss_pred hHHHHHHHHHHhcC---CEEEEEcCCccCHHHHhhCCceEeecCCCC
Q 044020 519 DKHTLVTQLRNTFG---EVVAVTGDGTNDASALHEADIGLAMGIAGT 562 (563)
Q Consensus 519 ~K~~~v~~l~~~~g---~~v~~iGDg~ND~~~l~~a~vgiamg~~~~ 562 (563)
.|...++.+.+++| +.++++||+.||++|++.||+|+||| |+.
T Consensus 191 ~K~~~~~~l~~~l~i~~~~~~~~GD~~nD~~m~~~ag~~va~~-na~ 236 (271)
T 1rlm_A 191 HKANGISRLLKRWDLSPQNVVAIGDSGNDAEMLKMARYSFAMG-NAA 236 (271)
T ss_dssp SHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHCSEEEECT-TCC
T ss_pred ChHHHHHHHHHHhCCCHHHEEEECCcHHHHHHHHHcCCeEEeC-Ccc
Confidence 68888888877655 57999999999999999999999999 774
|
| >1s2o_A SPP, sucrose-phosphatase; phosphohydrolase, HAD superfamily, cyanobacteria; 1.40A {Synechocystis SP} SCOP: c.108.1.10 PDB: 1tj3_A 1tj4_A* 1tj5_A* 1u2s_A* 1u2t_A* 2b1q_A* 2b1r_A* 2d2v_A* | Back alignment and structure |
|---|
Probab=98.46 E-value=1.8e-07 Score=89.00 Aligned_cols=43 Identities=19% Similarity=0.288 Sum_probs=38.3
Q ss_pred hHHHHHHHHHHhcC---CEEEEEcCCccCHHHHhhCCceEeecCCCC
Q 044020 519 DKHTLVTQLRNTFG---EVVAVTGDGTNDASALHEADIGLAMGIAGT 562 (563)
Q Consensus 519 ~K~~~v~~l~~~~g---~~v~~iGDg~ND~~~l~~a~vgiamg~~~~ 562 (563)
.|...++.+.+++| +.++++||+.||++|++.|++|++|| |+.
T Consensus 162 ~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~~g~~va~~-na~ 207 (244)
T 1s2o_A 162 NKGNATQYLQQHLAMEPSQTLVCGDSGNDIGLFETSARGVIVR-NAQ 207 (244)
T ss_dssp SHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHTSSSEEEECT-TCC
T ss_pred ChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHhccCcEEEEc-CCc
Confidence 58888888888765 57999999999999999999999999 775
|
| >3nas_A Beta-PGM, beta-phosphoglucomutase; PSI, structural genomics, protein structure initiative, NEW research center for structural genomics; 3.00A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=98.46 E-value=2.5e-07 Score=86.84 Aligned_cols=99 Identities=15% Similarity=0.123 Sum_probs=71.3
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCceeechhhhcCCCCCCCcceeEEEecChhhHHHHHH
Q 044020 446 VRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAKECGILTSDGEAVEGPEFRNMSPADIIPKLQVMARSLPSDKHTLVT 525 (563)
Q Consensus 446 ~~~~~~~~I~~l~~~gi~v~i~TGd~~~~a~~~a~~lgi~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~ 525 (563)
+.+++.+.++.|++.|+++.++|+... +..+.+.+|+......++.+.+. ......|+--..+++
T Consensus 93 ~~~~~~~~l~~l~~~g~~~~i~t~~~~--~~~~l~~~gl~~~f~~i~~~~~~-------------~~~Kp~~~~~~~~~~ 157 (233)
T 3nas_A 93 LLPGIGRLLCQLKNENIKIGLASSSRN--APKILRRLAIIDDFHAIVDPTTL-------------AKGKPDPDIFLTAAA 157 (233)
T ss_dssp SCTTHHHHHHHHHHTTCEEEECCSCTT--HHHHHHHTTCTTTCSEECCC----------------------CCHHHHHHH
T ss_pred cCcCHHHHHHHHHHCCCcEEEEcCchh--HHHHHHHcCcHhhcCEEeeHhhC-------------CCCCCChHHHHHHHH
Confidence 678999999999999999999999754 78889999987644444433321 111222333345555
Q ss_pred HHHHhcCCEEEEEcCCccCHHHHhhCCceEeecCCC
Q 044020 526 QLRNTFGEVVAVTGDGTNDASALHEADIGLAMGIAG 561 (563)
Q Consensus 526 ~l~~~~g~~v~~iGDg~ND~~~l~~a~vgiamg~~~ 561 (563)
.+.-. .+.+++|||+.||+.|.+.||++++|. ++
T Consensus 158 ~lgi~-~~~~i~vGDs~~Di~~a~~aG~~~~~~-~~ 191 (233)
T 3nas_A 158 MLDVS-PADCAAIEDAEAGISAIKSAGMFAVGV-GQ 191 (233)
T ss_dssp HHTSC-GGGEEEEECSHHHHHHHHHTTCEEEEC-C-
T ss_pred HcCCC-HHHEEEEeCCHHHHHHHHHcCCEEEEE-CC
Confidence 55544 478999999999999999999999998 54
|
| >3mc1_A Predicted phosphatase, HAD family; PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.93A {Clostridium acetobutylicum} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.45 E-value=8.2e-08 Score=89.67 Aligned_cols=99 Identities=14% Similarity=0.180 Sum_probs=75.3
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCceeechhhhcCCCCCCCcceeEEEecChhhHHHHH
Q 044020 445 PVRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAKECGILTSDGEAVEGPEFRNMSPADIIPKLQVMARSLPSDKHTLV 524 (563)
Q Consensus 445 ~~~~~~~~~I~~l~~~gi~v~i~TGd~~~~a~~~a~~lgi~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v 524 (563)
.+.+++.+.++.|++.|+++.++|+.....+....+.+|+......++.+... .....|...+
T Consensus 86 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~~~~~~-----------------~~~kp~~~~~ 148 (226)
T 3mc1_A 86 KVYDGIEALLSSLKDYGFHLVVATSKPTVFSKQILEHFKLAFYFDAIVGSSLD-----------------GKLSTKEDVI 148 (226)
T ss_dssp CBCTTHHHHHHHHHHHTCEEEEEEEEEHHHHHHHHHHTTCGGGCSEEEEECTT-----------------SSSCSHHHHH
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhCCHhheeeeeccCCC-----------------CCCCCCHHHH
Confidence 57899999999999999999999999999999999999986533333222211 0112355555
Q ss_pred HHHHHhcC---CEEEEEcCCccCHHHHhhCCc---eEeecCCC
Q 044020 525 TQLRNTFG---EVVAVTGDGTNDASALHEADI---GLAMGIAG 561 (563)
Q Consensus 525 ~~l~~~~g---~~v~~iGDg~ND~~~l~~a~v---giamg~~~ 561 (563)
+.+.+.+| +.+++|||+.||+.|++.||+ +|+|| ++
T Consensus 149 ~~~~~~lgi~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~g-~~ 190 (226)
T 3mc1_A 149 RYAMESLNIKSDDAIMIGDREYDVIGALKNNLPSIGVTYG-FG 190 (226)
T ss_dssp HHHHHHHTCCGGGEEEEESSHHHHHHHHTTTCCEEEESSS-SS
T ss_pred HHHHHHhCcCcccEEEECCCHHHHHHHHHCCCCEEEEccC-CC
Confidence 55554444 689999999999999999999 88888 54
|
| >1nf2_A Phosphatase; structural proteomics, HAD NEW fold, structural genomics, BSGC structure funded by NIH structure initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.44 E-value=5.8e-07 Score=86.69 Aligned_cols=42 Identities=12% Similarity=0.082 Sum_probs=38.5
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC
Q 044020 444 DPVRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAKECGILT 486 (563)
Q Consensus 444 d~~~~~~~~~I~~l~~~gi~v~i~TGd~~~~a~~~a~~lgi~~ 486 (563)
..+.+.++++|++ +++|++++++|||+...+..+.+.+|+..
T Consensus 18 ~~i~~~~~~al~~-~~~Gi~v~iaTGR~~~~~~~~~~~l~~~~ 59 (268)
T 1nf2_A 18 LEISEKDRRNIEK-LSRKCYVVFASGRMLVSTLNVEKKYFKRT 59 (268)
T ss_dssp SCCCHHHHHHHHH-HTTTSEEEEECSSCHHHHHHHHHHHSSSC
T ss_pred CccCHHHHHHHHH-HhCCCEEEEECCCChHHHHHHHHHhCCCC
Confidence 4588899999999 99999999999999999999999999853
|
| >1nnl_A L-3-phosphoserine phosphatase; PSP, HPSP, phospho-aspartyl, hydrolase; 1.53A {Homo sapiens} SCOP: c.108.1.4 PDB: 1l8l_A* 1l8o_A | Back alignment and structure |
|---|
Probab=98.43 E-value=3.8e-07 Score=85.27 Aligned_cols=105 Identities=19% Similarity=0.267 Sum_probs=76.1
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCceeechhhhcCCCCCCCcceeEEEec------Chh
Q 044020 445 PVRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAKECGILTSDGEAVEGPEFRNMSPADIIPKLQVMARS------LPS 518 (563)
Q Consensus 445 ~~~~~~~~~I~~l~~~gi~v~i~TGd~~~~a~~~a~~lgi~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~------~p~ 518 (563)
++.|++.++++.|+++|++++++|+.+...+..+.+.+|+... ..+...-.. .....+.+.. .+.
T Consensus 86 ~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~--~~f~~~~~~-------~~~~~~~~~~~~~~~~~~~ 156 (225)
T 1nnl_A 86 HLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNIPAT--NVFANRLKF-------YFNGEYAGFDETQPTAESG 156 (225)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCCGG--GEEEECEEE-------CTTSCEEEECTTSGGGSTT
T ss_pred CCCccHHHHHHHHHHCCCcEEEEeCChHHHHHHHHHHcCCCcc--cEEeeeEEE-------cCCCcEecCCCCCcccCCC
Confidence 5889999999999999999999999999999999999998630 011000000 0000011111 123
Q ss_pred hHHHHHHHHHHhcC-CEEEEEcCCccCHHHHhhCCceEeec
Q 044020 519 DKHTLVTQLRNTFG-EVVAVTGDGTNDASALHEADIGLAMG 558 (563)
Q Consensus 519 ~K~~~v~~l~~~~g-~~v~~iGDg~ND~~~l~~a~vgiamg 558 (563)
.|..+++.+.+.+| +.+++|||+.||+.|.+.||++|+++
T Consensus 157 ~Kp~~~~~~~~~~~~~~~~~vGDs~~Di~~a~~ag~~i~~~ 197 (225)
T 1nnl_A 157 GKGKVIKLLKEKFHFKKIIMIGDGATDMEACPPADAFIGFG 197 (225)
T ss_dssp HHHHHHHHHHHHHCCSCEEEEESSHHHHTTTTTSSEEEEEC
T ss_pred chHHHHHHHHHHcCCCcEEEEeCcHHhHHHHHhCCeEEEec
Confidence 67777777766656 68999999999999999999988887
|
| >1svj_A Potassium-transporting ATPase B chain; alpha-beta sandwich, hydrolase; NMR {Escherichia coli} SCOP: d.220.1.1 PDB: 1u7q_A 2a00_A* 2a29_A* | Back alignment and structure |
|---|
Probab=98.42 E-value=5.4e-07 Score=78.38 Aligned_cols=143 Identities=13% Similarity=0.174 Sum_probs=85.3
Q ss_pred cccccccCceEEEEEEEcCeeeeecCCCccccccccccHHHHHHHHHHHHhccCCceeecCCCCceecCCccHHHHHHHH
Q 044020 243 KTRMLTTNHMVVDKIWIANTISNVEGNNRKDILQSEISERVLDITLQAIFQNTGSKVVKDKDGKNSILGTPTESAILEFG 322 (563)
Q Consensus 243 KTGTLT~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~al~~~~ 322 (563)
.+||+|-|++.+..+...+... .+++ +..+..... .+.||..+||++++
T Consensus 13 ~~~tit~gnr~vt~v~~~~g~~---------------e~el---L~lAAs~E~-------------~SeHPla~AIv~~A 61 (156)
T 1svj_A 13 SSGHGGRHNRQASEFIPAQGVD---------------EKTL---ADAAQLASL-------------ADETPEGRSIVILA 61 (156)
T ss_dssp --------CEEEEEEEECTTSC---------------HHHH---HHHHHHTTS-------------SCCSHHHHHHHHHH
T ss_pred CCCceecCCCeEEEEEecCCCC---------------HHHH---HHHHHHHhC-------------cCCCHHHHHHHHHH
Confidence 4799999999999987644320 1222 223333322 23499999999999
Q ss_pred HHc-CCChHHHhhhceEEEEecCCCCceeEEEEEEcCCCeEEEEEeCChhHHHhcccccccCCCccccCCHHHHHHHHHH
Q 044020 323 LRL-GGDFEAQRREFKIVKVEPFNSVRKKMSVLIALPAGGMRAFCKGASEIVLSMCDKVVSDNGEPVPLSEEQFRNITDV 401 (563)
Q Consensus 323 ~~~-~~~~~~~~~~~~~~~~~~f~~~~~~~sviv~~~~~~~~~~~kG~~~~il~~c~~~~~~~~~~~~~~~~~~~~i~~~ 401 (563)
++. +......... .....+|+...++..+.+ ++ ..+.+|+++.|...+... |. .+.+ .+.+.
T Consensus 62 ~~~~~l~~~~~~~~--~~~~~~F~a~~G~~Gv~v---~G--~~v~vGn~~~i~~l~~~~----gi--~~~~----~~~~~ 124 (156)
T 1svj_A 62 KQRFNLRERDVQSL--HATFVPFTAQSRMSGINI---DN--RMIRKGSVDAIRRHVEAN----GG--HFPT----DVDQK 124 (156)
T ss_dssp HHHTTCCCCCHHHH--TCEEEEEETTTTEEEEEE---TT--EEEEEEEHHHHHHHHHHH----TC--CCCH----HHHHH
T ss_pred HHhcCCCccccccc--ccceeeccccCCCCeEEE---CC--EEEEEeCcHHHHHHHHHc----CC--CCcH----HHHHH
Confidence 876 5443211000 123568988877666643 23 346789987665554321 11 1222 25667
Q ss_pred HHHHHHHHHhHhHhhhhccCCCCCCCCCCCCCceEEEEecccCCCCc
Q 044020 402 INGFASEALRTLCLAFKDLNDSSNENNIPDSGYTLIAVVGIKDPVRP 448 (563)
Q Consensus 402 ~~~~~~~G~r~i~~a~~~l~~~~~~~~~~~~~~~~lG~i~~~d~~~~ 448 (563)
.+.+..+|.+++.+|. |..++|+|++.|++||
T Consensus 125 ~~~la~~G~T~v~VA~---------------d~~l~GvIalaD~iK~ 156 (156)
T 1svj_A 125 VDQVARQGATPLVVVE---------------GSRVLGVIALKDIVKG 156 (156)
T ss_dssp HHHHHHTTCEEEEEEE---------------TTEEEEEEEEEECCCC
T ss_pred HHHHHhCCCCEEEEEE---------------CCEEEEEEEEecCCCC
Confidence 7889999999999983 4589999999999986
|
| >1nrw_A Hypothetical protein, haloacid dehalogenase-like hydrolase; structural genomics, PSI, protein structure initiative; 1.70A {Bacillus subtilis} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.41 E-value=5.4e-07 Score=87.88 Aligned_cols=44 Identities=27% Similarity=0.268 Sum_probs=39.5
Q ss_pred cCCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC
Q 044020 443 KDPVRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAKECGILT 486 (563)
Q Consensus 443 ~d~~~~~~~~~I~~l~~~gi~v~i~TGd~~~~a~~~a~~lgi~~ 486 (563)
+..+.+.+.++|++++++|++++++|||+...+..+.+.+++..
T Consensus 19 ~~~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~ 62 (288)
T 1nrw_A 19 KHQVSLENENALRQAQRDGIEVVVSTGRAHFDVMSIFEPLGIKT 62 (288)
T ss_dssp TSCCCHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHGGGTCCC
T ss_pred CCccCHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCC
Confidence 34578899999999999999999999999999999999988753
|
| >2go7_A Hydrolase, haloacid dehalogenase-like family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.10A {Streptococcus pneumoniae} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=98.40 E-value=2.1e-07 Score=85.09 Aligned_cols=101 Identities=19% Similarity=0.197 Sum_probs=71.2
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCceeechhhhcCCCCCCCcceeEEEecChhhHHHHH
Q 044020 445 PVRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAKECGILTSDGEAVEGPEFRNMSPADIIPKLQVMARSLPSDKHTLV 524 (563)
Q Consensus 445 ~~~~~~~~~I~~l~~~gi~v~i~TGd~~~~a~~~a~~lgi~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v 524 (563)
.+.+++.+.++.+++.|++++++|+....... ..+.+|+......++...+.. .....|.--..++
T Consensus 85 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~-~~~~~~~~~~f~~~~~~~~~~-------------~~Kp~~~~~~~~~ 150 (207)
T 2go7_A 85 VLMPGAREVLAWADESGIQQFIYTHKGNNAFT-ILKDLGVESYFTEILTSQSGF-------------VRKPSPEAATYLL 150 (207)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCTHHHH-HHHHHTCGGGEEEEECGGGCC-------------CCTTSSHHHHHHH
T ss_pred eeCcCHHHHHHHHHHCCCeEEEEeCCchHHHH-HHHHcCchhheeeEEecCcCC-------------CCCCCcHHHHHHH
Confidence 36799999999999999999999999988888 888888764222222221110 0011122333444
Q ss_pred HHHHHhcCCEEEEEcCCccCHHHHhhCCce-EeecCCC
Q 044020 525 TQLRNTFGEVVAVTGDGTNDASALHEADIG-LAMGIAG 561 (563)
Q Consensus 525 ~~l~~~~g~~v~~iGDg~ND~~~l~~a~vg-iamg~~~ 561 (563)
+.++-. .+.+++|||+.||++|++.||++ ++|+ +|
T Consensus 151 ~~~~i~-~~~~~~iGD~~nDi~~~~~aG~~~i~~~-~~ 186 (207)
T 2go7_A 151 DKYQLN-SDNTYYIGDRTLDVEFAQNSGIQSINFL-ES 186 (207)
T ss_dssp HHHTCC-GGGEEEEESSHHHHHHHHHHTCEEEESS-CC
T ss_pred HHhCCC-cccEEEECCCHHHHHHHHHCCCeEEEEe-cC
Confidence 444433 46899999999999999999997 8888 65
|
| >3nuq_A Protein SSM1, putative nucleotide phosphatase; suppresses the 6-AU sensitivity of transcription elongation II; 1.70A {Saccharomyces cerevisiae} PDB: 3onn_A 3opx_A* | Back alignment and structure |
|---|
Probab=98.40 E-value=3.9e-07 Score=88.50 Aligned_cols=107 Identities=8% Similarity=-0.049 Sum_probs=76.3
Q ss_pred CCCCcchHHHHHHHHhCCC--eEEEEcCCCHHHHHHHHHHcCCCCCCCceeechhhhcCCCCCCCcceeEEEecChhhHH
Q 044020 444 DPVRPGVKEAVQTCLEAGI--TVRMVTGDNINTARAIAKECGILTSDGEAVEGPEFRNMSPADIIPKLQVMARSLPSDKH 521 (563)
Q Consensus 444 d~~~~~~~~~I~~l~~~gi--~v~i~TGd~~~~a~~~a~~lgi~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~p~~K~ 521 (563)
-++.+++.++++.|++.|+ +++++|+.....+....+.+|+......++.+...... .......|.--.
T Consensus 141 ~~~~p~~~~~L~~L~~~g~~~~l~i~Tn~~~~~~~~~l~~~gl~~~fd~v~~~~~~~~~---------~~~~Kp~~~~~~ 211 (282)
T 3nuq_A 141 LKPDIPLRNMLLRLRQSGKIDKLWLFTNAYKNHAIRCLRLLGIADLFDGLTYCDYSRTD---------TLVCKPHVKAFE 211 (282)
T ss_dssp CCCCHHHHHHHHHHHHSSSCSEEEEECSSCHHHHHHHHHHHTCTTSCSEEECCCCSSCS---------SCCCTTSHHHHH
T ss_pred cCcChhHHHHHHHHHhCCCCceEEEEECCChHHHHHHHHhCCcccccceEEEeccCCCc---------ccCCCcCHHHHH
Confidence 3578899999999999999 99999999999999999999997644444333211000 011111222233
Q ss_pred HHHHHHHHhcC-CEEEEEcCCccCHHHHhhCCceEeecCCC
Q 044020 522 TLVTQLRNTFG-EVVAVTGDGTNDASALHEADIGLAMGIAG 561 (563)
Q Consensus 522 ~~v~~l~~~~g-~~v~~iGDg~ND~~~l~~a~vgiamg~~~ 561 (563)
.+++.+... . +.+++|||+.||+.|.+.||+|.+|+ ++
T Consensus 212 ~~~~~lgi~-~~~~~i~vGD~~~Di~~a~~aG~~~~~~-~~ 250 (282)
T 3nuq_A 212 KAMKESGLA-RYENAYFIDDSGKNIETGIKLGMKTCIH-LV 250 (282)
T ss_dssp HHHHHHTCC-CGGGEEEEESCHHHHHHHHHHTCSEEEE-EC
T ss_pred HHHHHcCCC-CcccEEEEcCCHHHHHHHHHCCCeEEEE-Ec
Confidence 444444433 4 78999999999999999999999998 44
|
| >3kzx_A HAD-superfamily hydrolase, subfamily IA, variant; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 1.90A {Ehrlichia chaffeensis} | Back alignment and structure |
|---|
Probab=98.37 E-value=3.2e-07 Score=86.02 Aligned_cols=102 Identities=18% Similarity=0.174 Sum_probs=73.7
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCceeechhhhcCCCCCCCcceeEEEecChhhHHHHH
Q 044020 445 PVRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAKECGILTSDGEAVEGPEFRNMSPADIIPKLQVMARSLPSDKHTLV 524 (563)
Q Consensus 445 ~~~~~~~~~I~~l~~~gi~v~i~TGd~~~~a~~~a~~lgi~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v 524 (563)
.+.+++.+.++.|++.|+++.++|+.....+....+.+|+......++.+.+.. .....|+--..++
T Consensus 103 ~~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~-------------~~Kp~~~~~~~~~ 169 (231)
T 3kzx_A 103 MLNDGAIELLDTLKENNITMAIVSNKNGERLRSEIHHKNLTHYFDSIIGSGDTG-------------TIKPSPEPVLAAL 169 (231)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCGGGCSEEEEETSSS-------------CCTTSSHHHHHHH
T ss_pred eECcCHHHHHHHHHHCCCeEEEEECCCHHHHHHHHHHCCchhheeeEEcccccC-------------CCCCChHHHHHHH
Confidence 368899999999999999999999999999999999999865333333322210 0111223334445
Q ss_pred HHHHHhcCC-EEEEEcCCccCHHHHhhCCc-eEeecCCC
Q 044020 525 TQLRNTFGE-VVAVTGDGTNDASALHEADI-GLAMGIAG 561 (563)
Q Consensus 525 ~~l~~~~g~-~v~~iGDg~ND~~~l~~a~v-giamg~~~ 561 (563)
+.+... .+ .+++|||+.||+.|.+.||+ +|.|+ ++
T Consensus 170 ~~lgi~-~~~~~v~vGD~~~Di~~a~~aG~~~v~~~-~~ 206 (231)
T 3kzx_A 170 TNINIE-PSKEVFFIGDSISDIQSAIEAGCLPIKYG-ST 206 (231)
T ss_dssp HHHTCC-CSTTEEEEESSHHHHHHHHHTTCEEEEEC-C-
T ss_pred HHcCCC-cccCEEEEcCCHHHHHHHHHCCCeEEEEC-CC
Confidence 554443 45 89999999999999999997 88887 54
|
| >3e58_A Putative beta-phosphoglucomutase; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.86A {Streptococcus thermophilus lmg 18311} | Back alignment and structure |
|---|
Probab=98.37 E-value=4.8e-07 Score=83.19 Aligned_cols=100 Identities=15% Similarity=0.130 Sum_probs=75.2
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCceeechhhhcCCCCCCCcceeEEEecChhhHHHHH
Q 044020 445 PVRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAKECGILTSDGEAVEGPEFRNMSPADIIPKLQVMARSLPSDKHTLV 524 (563)
Q Consensus 445 ~~~~~~~~~I~~l~~~gi~v~i~TGd~~~~a~~~a~~lgi~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v 524 (563)
++.+++.+.++.|++.|++++++|+.....+....+.+|+......++.+.+.. .....|+--..++
T Consensus 89 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~-------------~~kp~~~~~~~~~ 155 (214)
T 3e58_A 89 LIFPDVLKVLNEVKSQGLEIGLASSSVKADIFRALEENRLQGFFDIVLSGEEFK-------------ESKPNPEIYLTAL 155 (214)
T ss_dssp HBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSEEEEGGGCS-------------SCTTSSHHHHHHH
T ss_pred CcCchHHHHHHHHHHCCCCEEEEeCCcHHHHHHHHHHcCcHhheeeEeeccccc-------------CCCCChHHHHHHH
Confidence 367899999999999999999999999999999999999875444444433211 0111233334455
Q ss_pred HHHHHhcCCEEEEEcCCccCHHHHhhCCceEeec
Q 044020 525 TQLRNTFGEVVAVTGDGTNDASALHEADIGLAMG 558 (563)
Q Consensus 525 ~~l~~~~g~~v~~iGDg~ND~~~l~~a~vgiamg 558 (563)
+.+.-. .+.+++|||+.||+.|.+.||++++|.
T Consensus 156 ~~~~~~-~~~~~~iGD~~~Di~~a~~aG~~~~~~ 188 (214)
T 3e58_A 156 KQLNVQ-ASRALIIEDSEKGIAAGVAADVEVWAI 188 (214)
T ss_dssp HHHTCC-GGGEEEEECSHHHHHHHHHTTCEEEEE
T ss_pred HHcCCC-hHHeEEEeccHhhHHHHHHCCCEEEEE
Confidence 555443 478999999999999999999988887
|
| >2wf7_A Beta-PGM, beta-phosphoglucomutase; transition state analogue, haloacid dehalogenase superfamily, isomerase, phosphotransferase; HET: G7P; 1.05A {Lactococcus lactis} PDB: 1o03_A* 1z4n_A* 1z4o_A* 1zol_A 2wf5_A* 2wf6_A* 1o08_A* 2wf8_A* 2wf9_A* 2wfa_A 2whe_A 1lvh_A* 3fm9_A | Back alignment and structure |
|---|
Probab=98.36 E-value=1.7e-07 Score=86.94 Aligned_cols=99 Identities=8% Similarity=0.050 Sum_probs=69.1
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCceeechhhhcCCCCCCCcceeEEEecChhhHHHHHH
Q 044020 446 VRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAKECGILTSDGEAVEGPEFRNMSPADIIPKLQVMARSLPSDKHTLVT 525 (563)
Q Consensus 446 ~~~~~~~~I~~l~~~gi~v~i~TGd~~~~a~~~a~~lgi~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~ 525 (563)
+.+++.+.++.+++.|+++.++|+. ..+....+.+|+......++.+.+.. .....|+.-..+++
T Consensus 92 ~~~~~~~~l~~l~~~g~~~~i~t~~--~~~~~~l~~~~l~~~f~~~~~~~~~~-------------~~Kp~~~~~~~~~~ 156 (221)
T 2wf7_A 92 VYPGILQLLKDLRSNKIKIALASAS--KNGPFLLERMNLTGYFDAIADPAEVA-------------ASKPAPDIFIAAAH 156 (221)
T ss_dssp BCTTHHHHHHHHHHTTCEEEECCCC--TTHHHHHHHTTCGGGCSEECCTTTSS-------------SCTTSSHHHHHHHH
T ss_pred CCCCHHHHHHHHHHCCCeEEEEcCc--HHHHHHHHHcChHHHcceEeccccCC-------------CCCCChHHHHHHHH
Confidence 6789999999999999999999998 45567788888764333333322210 00111222333444
Q ss_pred HHHHhcCCEEEEEcCCccCHHHHhhCCceEeecCCC
Q 044020 526 QLRNTFGEVVAVTGDGTNDASALHEADIGLAMGIAG 561 (563)
Q Consensus 526 ~l~~~~g~~v~~iGDg~ND~~~l~~a~vgiamg~~~ 561 (563)
.+... .+.+++|||+.||++|++.||++++|+ |+
T Consensus 157 ~lgi~-~~~~i~iGD~~nDi~~a~~aG~~~~~~-~~ 190 (221)
T 2wf7_A 157 AVGVA-PSESIGLEDSQAGIQAIKDSGALPIGV-GR 190 (221)
T ss_dssp HTTCC-GGGEEEEESSHHHHHHHHHHTCEEEEE-SC
T ss_pred HcCCC-hhHeEEEeCCHHHHHHHHHCCCEEEEE-CC
Confidence 44333 478999999999999999999999998 65
|
| >2rbk_A Putative uncharacterized protein; HAD-like phosphatase, unknown function; 1.00A {Bacteroides thetaiotaomicron} SCOP: c.108.1.10 PDB: 1ymq_A 2rb5_A 2rav_A 2rar_A | Back alignment and structure |
|---|
Probab=98.35 E-value=2.6e-07 Score=88.80 Aligned_cols=43 Identities=40% Similarity=0.589 Sum_probs=37.2
Q ss_pred hHHHHHHHHHHhcC---CEEEEEcCCccCHHHHhhCCceEeecCCCC
Q 044020 519 DKHTLVTQLRNTFG---EVVAVTGDGTNDASALHEADIGLAMGIAGT 562 (563)
Q Consensus 519 ~K~~~v~~l~~~~g---~~v~~iGDg~ND~~~l~~a~vgiamg~~~~ 562 (563)
.|...++.+.+++| +.++++||+.||++|++.||+|++|| |+.
T Consensus 187 ~K~~~~~~~~~~~~~~~~~~~~iGD~~nD~~~~~~ag~~v~~~-n~~ 232 (261)
T 2rbk_A 187 TKQKGIDEIIRHFGIKLEETMSFGDGGNDISMLRHAAIGVAMG-QAK 232 (261)
T ss_dssp SHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TSC
T ss_pred ChHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCceEEec-Ccc
Confidence 57777888777655 57999999999999999999999999 774
|
| >3s6j_A Hydrolase, haloacid dehalogenase-like family; structural genomics, PSI-2; 2.20A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=98.35 E-value=4.1e-07 Score=85.14 Aligned_cols=97 Identities=21% Similarity=0.201 Sum_probs=73.1
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCceeechhhhcCCCCCCCcceeEEEecChhhHHHHH
Q 044020 445 PVRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAKECGILTSDGEAVEGPEFRNMSPADIIPKLQVMARSLPSDKHTLV 524 (563)
Q Consensus 445 ~~~~~~~~~I~~l~~~gi~v~i~TGd~~~~a~~~a~~lgi~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v 524 (563)
.+.+++.+.++.|++.|++++++|+.....+....+.+|+......++.+.... . ...|..++
T Consensus 91 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~-------------~----~kp~~~~~ 153 (233)
T 3s6j_A 91 IALPGAVELLETLDKENLKWCIATSGGIDTATINLKALKLDINKINIVTRDDVS-------------Y----GKPDPDLF 153 (233)
T ss_dssp EECTTHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHTTTCCTTSSCEECGGGSS-------------C----CTTSTHHH
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCchhhHHHHHHhcchhhhhheeeccccCC-------------C----CCCChHHH
Confidence 367899999999999999999999999999999999999876444444433211 0 11223444
Q ss_pred HHHHHhcC---CEEEEEcCCccCHHHHhhCCc---eEeec
Q 044020 525 TQLRNTFG---EVVAVTGDGTNDASALHEADI---GLAMG 558 (563)
Q Consensus 525 ~~l~~~~g---~~v~~iGDg~ND~~~l~~a~v---giamg 558 (563)
+.+.+.+| +.+++|||+.||+.|++.||+ +|++|
T Consensus 154 ~~~~~~l~~~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~g 193 (233)
T 3s6j_A 154 LAAAKKIGAPIDECLVIGDAIWDMLAARRCKATGVGLLSG 193 (233)
T ss_dssp HHHHHHTTCCGGGEEEEESSHHHHHHHHHTTCEEEEEGGG
T ss_pred HHHHHHhCCCHHHEEEEeCCHHhHHHHHHCCCEEEEEeCC
Confidence 44444434 789999999999999999999 67666
|
| >3um9_A Haloacid dehalogenase, type II; haloacid dehalogenase-like hydrolase protein superfamily, defluorinase, hydrolase; 2.19A {Polaromonas SP} | Back alignment and structure |
|---|
Probab=98.35 E-value=5.9e-07 Score=83.93 Aligned_cols=99 Identities=13% Similarity=0.124 Sum_probs=72.7
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCceeechhhhcCCCCCCCcceeEEEecChhhHHHHH
Q 044020 445 PVRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAKECGILTSDGEAVEGPEFRNMSPADIIPKLQVMARSLPSDKHTLV 524 (563)
Q Consensus 445 ~~~~~~~~~I~~l~~~gi~v~i~TGd~~~~a~~~a~~lgi~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v 524 (563)
++.+++.+.++.|++.|+++.++|+.+...+....+.+|+......++.+.... .....|.--..++
T Consensus 96 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~-------------~~kp~~~~~~~~~ 162 (230)
T 3um9_A 96 TPFADVPQALQQLRAAGLKTAILSNGSRHSIRQVVGNSGLTNSFDHLISVDEVR-------------LFKPHQKVYELAM 162 (230)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHTCGGGCSEEEEGGGTT-------------CCTTCHHHHHHHH
T ss_pred CCCCCHHHHHHHHHhCCCeEEEEeCCCHHHHHHHHHHCCChhhcceeEehhhcc-------------cCCCChHHHHHHH
Confidence 478899999999999999999999999999999999999865333333332211 0011122223344
Q ss_pred HHHHHhcCCEEEEEcCCccCHHHHhhCCceEee
Q 044020 525 TQLRNTFGEVVAVTGDGTNDASALHEADIGLAM 557 (563)
Q Consensus 525 ~~l~~~~g~~v~~iGDg~ND~~~l~~a~vgiam 557 (563)
+.+.-. .+.+++|||+.||+.|.+.||++++|
T Consensus 163 ~~~~~~-~~~~~~iGD~~~Di~~a~~aG~~~~~ 194 (230)
T 3um9_A 163 DTLHLG-ESEILFVSCNSWDATGAKYFGYPVCW 194 (230)
T ss_dssp HHHTCC-GGGEEEEESCHHHHHHHHHHTCCEEE
T ss_pred HHhCCC-cccEEEEeCCHHHHHHHHHCCCEEEE
Confidence 444333 47899999999999999999999999
|
| >2om6_A Probable phosphoserine phosphatase; rossmann fold, B-hairpin, four-helix bundle, structural GENO NPPSFA; 2.20A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=98.32 E-value=9.9e-07 Score=82.54 Aligned_cols=95 Identities=19% Similarity=0.223 Sum_probs=70.8
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCC---HHHHHHHHHHcCCCCCCCceeechhhhcCCCCCCCcceeEEEecChhhHHH
Q 044020 446 VRPGVKEAVQTCLEAGITVRMVTGDN---INTARAIAKECGILTSDGEAVEGPEFRNMSPADIIPKLQVMARSLPSDKHT 522 (563)
Q Consensus 446 ~~~~~~~~I~~l~~~gi~v~i~TGd~---~~~a~~~a~~lgi~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~p~~K~~ 522 (563)
+.+++.+.++.|++.|+++.++|+.. ........+.+|+......++.+.+... ..| +..
T Consensus 100 ~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~---------------~kp--~~~ 162 (235)
T 2om6_A 100 VLEGTKEALQFVKERGLKTAVIGNVMFWPGSYTRLLLERFGLMEFIDKTFFADEVLS---------------YKP--RKE 162 (235)
T ss_dssp BCTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHHHHHHTTCGGGCSEEEEHHHHTC---------------CTT--CHH
T ss_pred cCccHHHHHHHHHHCCCEEEEEcCCcccchhHHHHHHHhCCcHHHhhhheeccccCC---------------CCC--CHH
Confidence 47899999999999999999999999 8888899999998654333333332210 011 223
Q ss_pred HHHHHHHhcC---CEEEEEcCCc-cCHHHHhhCCceEee
Q 044020 523 LVTQLRNTFG---EVVAVTGDGT-NDASALHEADIGLAM 557 (563)
Q Consensus 523 ~v~~l~~~~g---~~v~~iGDg~-ND~~~l~~a~vgiam 557 (563)
+.+.+.+++| +.+++|||+. ||+.|++.||++++|
T Consensus 163 ~~~~~~~~lgi~~~~~~~iGD~~~nDi~~a~~aG~~~~~ 201 (235)
T 2om6_A 163 MFEKVLNSFEVKPEESLHIGDTYAEDYQGARKVGMWAVW 201 (235)
T ss_dssp HHHHHHHHTTCCGGGEEEEESCTTTTHHHHHHTTSEEEE
T ss_pred HHHHHHHHcCCCccceEEECCChHHHHHHHHHCCCEEEE
Confidence 3334433333 7899999999 999999999999999
|
| >2nyv_A Pgpase, PGP, phosphoglycolate phosphatase; structural genomics, PSI-2, protein structure initiative; 2.10A {Aquifex aeolicus} PDB: 2yy6_A | Back alignment and structure |
|---|
Probab=98.32 E-value=4.7e-07 Score=84.57 Aligned_cols=100 Identities=15% Similarity=0.119 Sum_probs=73.2
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCceeechhhhcCCCCCCCcceeEEEecChhhHHHHH
Q 044020 445 PVRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAKECGILTSDGEAVEGPEFRNMSPADIIPKLQVMARSLPSDKHTLV 524 (563)
Q Consensus 445 ~~~~~~~~~I~~l~~~gi~v~i~TGd~~~~a~~~a~~lgi~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v 524 (563)
++.|++.++++.|++.|+++.++|+.+...+..+.+.+|+......++.+.+.. .....|+-...++
T Consensus 83 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~-------------~~Kp~~~~~~~~~ 149 (222)
T 2nyv_A 83 KPYPEIPYTLEALKSKGFKLAVVSNKLEELSKKILDILNLSGYFDLIVGGDTFG-------------EKKPSPTPVLKTL 149 (222)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGCSEEECTTSSC-------------TTCCTTHHHHHHH
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCHHHheEEEecCcCC-------------CCCCChHHHHHHH
Confidence 468999999999999999999999999999999999999865333333332210 0112233344555
Q ss_pred HHHHHhcCCEEEEEcCCccCHHHHhhCCce-Eeec
Q 044020 525 TQLRNTFGEVVAVTGDGTNDASALHEADIG-LAMG 558 (563)
Q Consensus 525 ~~l~~~~g~~v~~iGDg~ND~~~l~~a~vg-iamg 558 (563)
+.+... .+.+++|||+.||++|.+.||+. |++.
T Consensus 150 ~~~~~~-~~~~~~vGD~~~Di~~a~~aG~~~i~v~ 183 (222)
T 2nyv_A 150 EILGEE-PEKALIVGDTDADIEAGKRAGTKTALAL 183 (222)
T ss_dssp HHHTCC-GGGEEEEESSHHHHHHHHHHTCEEEEET
T ss_pred HHhCCC-chhEEEECCCHHHHHHHHHCCCeEEEEc
Confidence 555443 47899999999999999999987 5554
|
| >3kd3_A Phosphoserine phosphohydrolase-like protein; csgid, niaid, S genomics, national institute of allergy and infectious DISE (niaid); 1.70A {Francisella tularensis subsp} | Back alignment and structure |
|---|
Probab=98.32 E-value=7.4e-07 Score=82.32 Aligned_cols=103 Identities=16% Similarity=0.119 Sum_probs=69.9
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCC----ceeechhhhcCCCCCCCcceeEEEecChhhHH
Q 044020 446 VRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAKECGILTSDG----EAVEGPEFRNMSPADIIPKLQVMARSLPSDKH 521 (563)
Q Consensus 446 ~~~~~~~~I~~l~~~gi~v~i~TGd~~~~a~~~a~~lgi~~~~~----~~~~g~~~~~~~~~~~~~~~~v~~~~~p~~K~ 521 (563)
+.+++.+.++.|+++|++++++|+.....+..+.+.+|+..... .++..... ... ......+|..+.
T Consensus 83 ~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~-~~~~~~~~~~~~ 153 (219)
T 3kd3_A 83 LTDGIKELVQDLKNKGFEIWIFSGGLSESIQPFADYLNIPRENIFAVETIWNSDGS--------FKE-LDNSNGACDSKL 153 (219)
T ss_dssp BCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCCGGGEEEEEEEECTTSB--------EEE-EECTTSTTTCHH
T ss_pred CChhHHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHcCCCcccEEEeeeeecCCCc--------eec-cCCCCCCcccHH
Confidence 78999999999999999999999999999999999999853110 01101000 000 011122344566
Q ss_pred HHHHHH-HHhcCCEEEEEcCCccCHHHHhh----CCceEeec
Q 044020 522 TLVTQL-RNTFGEVVAVTGDGTNDASALHE----ADIGLAMG 558 (563)
Q Consensus 522 ~~v~~l-~~~~g~~v~~iGDg~ND~~~l~~----a~vgiamg 558 (563)
..+..+ ... .+.++++||+.||++|++. ++++++|+
T Consensus 154 ~~l~~~~~~~-~~~~~~vGD~~~Di~~~~~G~~~~~v~~~~~ 194 (219)
T 3kd3_A 154 SAFDKAKGLI-DGEVIAIGDGYTDYQLYEKGYATKFIAYMEH 194 (219)
T ss_dssp HHHHHHGGGC-CSEEEEEESSHHHHHHHHHTSCSEEEEECSS
T ss_pred HHHHHHhCCC-CCCEEEEECCHhHHHHHhCCCCcEEEeccCc
Confidence 555544 333 6899999999999999976 35555555
|
| >4gxt_A A conserved functionally unknown protein; structural genomics, PSI-biology; 1.82A {Anaerococcus prevotii} | Back alignment and structure |
|---|
Probab=98.31 E-value=3.3e-07 Score=92.69 Aligned_cols=119 Identities=19% Similarity=0.234 Sum_probs=77.6
Q ss_pred cccCCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCC--CCceeechhhhcCCCCCCCccee-EEEecCh
Q 044020 441 GIKDPVRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAKECGILTS--DGEAVEGPEFRNMSPADIIPKLQ-VMARSLP 517 (563)
Q Consensus 441 ~~~d~~~~~~~~~I~~l~~~gi~v~i~TGd~~~~a~~~a~~lgi~~~--~~~~~~g~~~~~~~~~~~~~~~~-v~~~~~p 517 (563)
.-.-.+.|++++.|+.|+++|++|+|+||.....++.+|+++|+... ...++ |..+..........+.. ...-...
T Consensus 217 ~~gir~~p~~~eLi~~L~~~G~~v~IVSgg~~~~v~~ia~~lg~~y~ip~~~Vi-g~~l~~~~dG~~tg~~~~~~p~~~~ 295 (385)
T 4gxt_A 217 FVGIRTLDEMVDLYRSLEENGIDCYIVSASFIDIVRAFATDTNNNYKMKEEKVL-GLRLMKDDEGKILPKFDKDFPISIR 295 (385)
T ss_dssp EECCEECHHHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHCTTSSCCCCGGGEE-EECEEECTTCCEEEEECTTSCCCST
T ss_pred ccCceeCHHHHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHhCcccCCCcceEE-EeEEEEecCCceeeeecCccceeCC
Confidence 33345799999999999999999999999999999999999987431 11222 32222111111000000 0001235
Q ss_pred hhHHHHHHHHHHh-cC-CEEEEEcCCccCHHHHhh-CCceEeecCC
Q 044020 518 SDKHTLVTQLRNT-FG-EVVAVTGDGTNDASALHE-ADIGLAMGIA 560 (563)
Q Consensus 518 ~~K~~~v~~l~~~-~g-~~v~~iGDg~ND~~~l~~-a~vgiamg~~ 560 (563)
+.|...++.+... .| ..++++|||.||++||+. +|.++.+.+|
T Consensus 296 ~gK~~~i~~~~~~~~~~~~i~a~GDs~~D~~ML~~~~~~~~~liin 341 (385)
T 4gxt_A 296 EGKVQTINKLIKNDRNYGPIMVGGDSDGDFAMLKEFDHTDLSLIIH 341 (385)
T ss_dssp HHHHHHHHHHTCCTTEECCSEEEECSGGGHHHHHHCTTCSEEEEEC
T ss_pred CchHHHHHHHHHhcCCCCcEEEEECCHhHHHHHhcCccCceEEEEc
Confidence 6799999877432 12 458888999999999996 5666655444
|
| >2hsz_A Novel predicted phosphatase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: UNL; 1.90A {Haemophilus somnus 129PT} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=98.31 E-value=4.6e-07 Score=85.92 Aligned_cols=98 Identities=21% Similarity=0.267 Sum_probs=72.4
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCceeechhhhcCCCCCCCcceeEEEecChhhHHHHH
Q 044020 445 PVRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAKECGILTSDGEAVEGPEFRNMSPADIIPKLQVMARSLPSDKHTLV 524 (563)
Q Consensus 445 ~~~~~~~~~I~~l~~~gi~v~i~TGd~~~~a~~~a~~lgi~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v 524 (563)
++.+++.+.++.|++.|++++++|+.+...+..+.+.+|+......++.+.+... ....|.-...++
T Consensus 114 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~gl~~~f~~~~~~~~~~~-------------~Kp~~~~~~~~~ 180 (243)
T 2hsz_A 114 RLYPNVKETLEALKAQGYILAVVTNKPTKHVQPILTAFGIDHLFSEMLGGQSLPE-------------IKPHPAPFYYLC 180 (243)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGCSEEECTTTSSS-------------CTTSSHHHHHHH
T ss_pred ccCCCHHHHHHHHHHCCCEEEEEECCcHHHHHHHHHHcCchheEEEEEecccCCC-------------CCcCHHHHHHHH
Confidence 4678999999999999999999999999999999999998654334443332110 011233344455
Q ss_pred HHHHHhcCCEEEEEcCCccCHHHHhhCCceEe
Q 044020 525 TQLRNTFGEVVAVTGDGTNDASALHEADIGLA 556 (563)
Q Consensus 525 ~~l~~~~g~~v~~iGDg~ND~~~l~~a~vgia 556 (563)
+.+... .+.+++|||+.||++|++.||++++
T Consensus 181 ~~~~~~-~~~~~~vGD~~~Di~~a~~aG~~~i 211 (243)
T 2hsz_A 181 GKFGLY-PKQILFVGDSQNDIFAAHSAGCAVV 211 (243)
T ss_dssp HHHTCC-GGGEEEEESSHHHHHHHHHHTCEEE
T ss_pred HHhCcC-hhhEEEEcCCHHHHHHHHHCCCeEE
Confidence 555443 4789999999999999999998743
|
| >1swv_A Phosphonoacetaldehyde hydrolase; HAD enzyme superfamily, phosphonotase, metal binding; 2.30A {Bacillus cereus} SCOP: c.108.1.3 PDB: 1sww_A 2iof_A* 2ioh_A 1rql_A 1rqn_A 2iof_K* 1rdf_A 1fez_A | Back alignment and structure |
|---|
Probab=98.30 E-value=5.8e-07 Score=86.32 Aligned_cols=100 Identities=22% Similarity=0.234 Sum_probs=72.2
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCC-CceeechhhhcCCCCCCCcceeEEEecChhhHHHH
Q 044020 445 PVRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAKECGILTSD-GEAVEGPEFRNMSPADIIPKLQVMARSLPSDKHTL 523 (563)
Q Consensus 445 ~~~~~~~~~I~~l~~~gi~v~i~TGd~~~~a~~~a~~lgi~~~~-~~~~~g~~~~~~~~~~~~~~~~v~~~~~p~~K~~~ 523 (563)
.+.+++.+.++.|++.|+++.++|+.....+..+.+.+|+.... ..++.+.... .....|..-..+
T Consensus 103 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~-------------~~kp~~~~~~~~ 169 (267)
T 1swv_A 103 SPINGVKEVIASLRERGIKIGSTTGYTREMMDIVAKEAALQGYKPDFLVTPDDVP-------------AGRPYPWMCYKN 169 (267)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEBCSSCHHHHHHHHHHHHHTTCCCSCCBCGGGSS-------------CCTTSSHHHHHH
T ss_pred ccCccHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHcCCcccChHheecCCccC-------------CCCCCHHHHHHH
Confidence 36789999999999999999999999998888888888875432 3333332210 011123334445
Q ss_pred HHHHHHhcC-CEEEEEcCCccCHHHHhhCC---ceEeec
Q 044020 524 VTQLRNTFG-EVVAVTGDGTNDASALHEAD---IGLAMG 558 (563)
Q Consensus 524 v~~l~~~~g-~~v~~iGDg~ND~~~l~~a~---vgiamg 558 (563)
++.+... . +.+++|||+.||++|++.|| +++++|
T Consensus 170 ~~~lgi~-~~~~~i~iGD~~nDi~~a~~aG~~~i~v~~~ 207 (267)
T 1swv_A 170 AMELGVY-PMNHMIKVGDTVSDMKEGRNAGMWTVGVILG 207 (267)
T ss_dssp HHHHTCC-SGGGEEEEESSHHHHHHHHHTTSEEEEECTT
T ss_pred HHHhCCC-CCcCEEEEeCCHHHHHHHHHCCCEEEEEcCC
Confidence 5555443 4 68999999999999999999 677777
|
| >3umb_A Dehalogenase-like hydrolase; 2.20A {Ralstonia solanacearum} | Back alignment and structure |
|---|
Probab=98.30 E-value=5.9e-07 Score=84.14 Aligned_cols=99 Identities=10% Similarity=0.076 Sum_probs=74.4
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCceeechhhhcCCCCCCCcceeEEEecChhhHHHHH
Q 044020 445 PVRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAKECGILTSDGEAVEGPEFRNMSPADIIPKLQVMARSLPSDKHTLV 524 (563)
Q Consensus 445 ~~~~~~~~~I~~l~~~gi~v~i~TGd~~~~a~~~a~~lgi~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v 524 (563)
++.+++.++++.|++.|+++.++|+.+...+....+.+|+......++.+.... .....|.--..++
T Consensus 99 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~-------------~~kp~~~~~~~~~ 165 (233)
T 3umb_A 99 SAFPENVPVLRQLREMGLPLGILSNGNPQMLEIAVKSAGMSGLFDHVLSVDAVR-------------LYKTAPAAYALAP 165 (233)
T ss_dssp EECTTHHHHHHHHHTTTCCEEEEESSCHHHHHHHHHTTTCTTTCSEEEEGGGTT-------------CCTTSHHHHTHHH
T ss_pred CCCCCHHHHHHHHHhCCCcEEEEeCCCHHHHHHHHHHCCcHhhcCEEEEecccC-------------CCCcCHHHHHHHH
Confidence 467899999999999999999999999999999999999876444444333211 0111222333444
Q ss_pred HHHHHhcCCEEEEEcCCccCHHHHhhCCceEee
Q 044020 525 TQLRNTFGEVVAVTGDGTNDASALHEADIGLAM 557 (563)
Q Consensus 525 ~~l~~~~g~~v~~iGDg~ND~~~l~~a~vgiam 557 (563)
+.+.-. .+.+++|||+.||+.|.+.||++++|
T Consensus 166 ~~~~~~-~~~~~~vGD~~~Di~~a~~~G~~~~~ 197 (233)
T 3umb_A 166 RAFGVP-AAQILFVSSNGWDACGATWHGFTTFW 197 (233)
T ss_dssp HHHTSC-GGGEEEEESCHHHHHHHHHHTCEEEE
T ss_pred HHhCCC-cccEEEEeCCHHHHHHHHHcCCEEEE
Confidence 444433 47899999999999999999999999
|
| >2wm8_A MDP-1, magnesium-dependent phosphatase 1; haloacid dehalogenase, protein phosphatase, hydrolase, magne metal-binding; 1.75A {Homo sapiens} PDB: 1u7o_A 1u7p_A | Back alignment and structure |
|---|
Probab=98.30 E-value=1.4e-06 Score=79.00 Aligned_cols=87 Identities=14% Similarity=0.208 Sum_probs=67.6
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCC-HHHHHHHHHHcCCCCCCCceeechhhhcCCCCCCCcceeEEEe--cChhhHH
Q 044020 445 PVRPGVKEAVQTCLEAGITVRMVTGDN-INTARAIAKECGILTSDGEAVEGPEFRNMSPADIIPKLQVMAR--SLPSDKH 521 (563)
Q Consensus 445 ~~~~~~~~~I~~l~~~gi~v~i~TGd~-~~~a~~~a~~lgi~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~--~~p~~K~ 521 (563)
++.|++.++|++|+++|++++++||++ ...+..+.+.+|+.. .|.. ..+..|.
T Consensus 68 ~~~~g~~e~L~~L~~~G~~v~ivT~~~~~~~~~~~l~~~gl~~------------------------~f~~~~~~~~~k~ 123 (187)
T 2wm8_A 68 RLYPEVPEVLKRLQSLGVPGAAASRTSEIEGANQLLELFDLFR------------------------YFVHREIYPGSKI 123 (187)
T ss_dssp CCCTTHHHHHHHHHHHTCCEEEEECCSCHHHHHHHHHHTTCTT------------------------TEEEEEESSSCHH
T ss_pred CcchhHHHHHHHHHHCCceEEEEeCCCChHHHHHHHHHcCcHh------------------------hcceeEEEeCchH
Confidence 578999999999999999999999999 799999999999875 2221 1223444
Q ss_pred HHHHHHHHhcC---CEEEEEcCCccCHHHHhhCCceE
Q 044020 522 TLVTQLRNTFG---EVVAVTGDGTNDASALHEADIGL 555 (563)
Q Consensus 522 ~~v~~l~~~~g---~~v~~iGDg~ND~~~l~~a~vgi 555 (563)
...+.+.+.+| +.+++|||+.+|+.+.+.||+..
T Consensus 124 ~~~~~~~~~~~~~~~~~~~igD~~~Di~~a~~aG~~~ 160 (187)
T 2wm8_A 124 THFERLQQKTGIPFSQMIFFDDERRNIVDVSKLGVTC 160 (187)
T ss_dssp HHHHHHHHHHCCCGGGEEEEESCHHHHHHHHTTTCEE
T ss_pred HHHHHHHHHcCCChHHEEEEeCCccChHHHHHcCCEE
Confidence 44444433334 67999999999999999999853
|
| >3d6j_A Putative haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343} | Back alignment and structure |
|---|
Probab=98.30 E-value=5.9e-07 Score=83.41 Aligned_cols=95 Identities=13% Similarity=0.081 Sum_probs=69.0
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCceeechhhhcCCCCCCCcceeEEEecChhhHHHHHH
Q 044020 446 VRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAKECGILTSDGEAVEGPEFRNMSPADIIPKLQVMARSLPSDKHTLVT 525 (563)
Q Consensus 446 ~~~~~~~~I~~l~~~gi~v~i~TGd~~~~a~~~a~~lgi~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~ 525 (563)
+.+++.+.++.+++.|++++++|+..........+.+|+......++.+.... . ...|...++
T Consensus 90 ~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~--~k~~~~~~~ 152 (225)
T 3d6j_A 90 LFPDTLPTLTHLKKQGIRIGIISTKYRFRILSFLRNHMPDDWFDIIIGGEDVT---------------H--HKPDPEGLL 152 (225)
T ss_dssp ECTTHHHHHHHHHHHTCEEEEECSSCHHHHHHHHHTSSCTTCCSEEECGGGCS---------------S--CTTSTHHHH
T ss_pred cCcCHHHHHHHHHHCCCeEEEEECCCHHHHHHHHHHcCchhheeeeeehhhcC---------------C--CCCChHHHH
Confidence 46899999999999999999999999988999999998865333333322110 0 111223333
Q ss_pred HHHHhcC---CEEEEEcCCccCHHHHhhCCceEee
Q 044020 526 QLRNTFG---EVVAVTGDGTNDASALHEADIGLAM 557 (563)
Q Consensus 526 ~l~~~~g---~~v~~iGDg~ND~~~l~~a~vgiam 557 (563)
.+.+++| +.+++|||+.||++|++.||++++|
T Consensus 153 ~~~~~~~~~~~~~i~iGD~~nDi~~~~~aG~~~~~ 187 (225)
T 3d6j_A 153 LAIDRLKACPEEVLYIGDSTVDAGTAAAAGVSFTG 187 (225)
T ss_dssp HHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEE
T ss_pred HHHHHhCCChHHeEEEcCCHHHHHHHHHCCCeEEE
Confidence 4433333 6799999999999999999998887
|
| >3qnm_A Haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 1.70A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.24 E-value=1.8e-06 Score=81.09 Aligned_cols=97 Identities=9% Similarity=0.069 Sum_probs=72.6
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCceeechhhhcCCCCCCCcceeEEEecChhhHHHHH
Q 044020 445 PVRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAKECGILTSDGEAVEGPEFRNMSPADIIPKLQVMARSLPSDKHTLV 524 (563)
Q Consensus 445 ~~~~~~~~~I~~l~~~gi~v~i~TGd~~~~a~~~a~~lgi~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v 524 (563)
.+.+++.++++.++ .|++++++|+.+...+....+.+|+......++.+.+.. ....|..++
T Consensus 107 ~~~~~~~~~l~~l~-~g~~~~i~sn~~~~~~~~~l~~~~l~~~f~~~~~~~~~~-----------------~~kp~~~~~ 168 (240)
T 3qnm_A 107 GLMPHAKEVLEYLA-PQYNLYILSNGFRELQSRKMRSAGVDRYFKKIILSEDLG-----------------VLKPRPEIF 168 (240)
T ss_dssp CBSTTHHHHHHHHT-TTSEEEEEECSCHHHHHHHHHHHTCGGGCSEEEEGGGTT-----------------CCTTSHHHH
T ss_pred CcCccHHHHHHHHH-cCCeEEEEeCCchHHHHHHHHHcChHhhceeEEEeccCC-----------------CCCCCHHHH
Confidence 46789999999999 999999999999999999999999865433333332211 012233444
Q ss_pred HHHHHhcC---CEEEEEcCCc-cCHHHHhhCCceEeecC
Q 044020 525 TQLRNTFG---EVVAVTGDGT-NDASALHEADIGLAMGI 559 (563)
Q Consensus 525 ~~l~~~~g---~~v~~iGDg~-ND~~~l~~a~vgiamg~ 559 (563)
+.+.+.+| +.+++|||+. ||+.|.+.||++++|.+
T Consensus 169 ~~~~~~lgi~~~~~~~iGD~~~~Di~~a~~aG~~~~~~~ 207 (240)
T 3qnm_A 169 HFALSATQSELRESLMIGDSWEADITGAHGVGMHQAFYN 207 (240)
T ss_dssp HHHHHHTTCCGGGEEEEESCTTTTHHHHHHTTCEEEEEC
T ss_pred HHHHHHcCCCcccEEEECCCchHhHHHHHHcCCeEEEEc
Confidence 44444434 7899999995 99999999999999983
|
| >1zrn_A L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseudomonas SP} SCOP: c.108.1.1 PDB: 1zrm_A 1jud_A 1qh9_A | Back alignment and structure |
|---|
Probab=98.23 E-value=1.1e-06 Score=82.44 Aligned_cols=100 Identities=7% Similarity=0.036 Sum_probs=73.7
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCceeechhhhcCCCCCCCcceeEEEecChhhHHHHH
Q 044020 445 PVRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAKECGILTSDGEAVEGPEFRNMSPADIIPKLQVMARSLPSDKHTLV 524 (563)
Q Consensus 445 ~~~~~~~~~I~~l~~~gi~v~i~TGd~~~~a~~~a~~lgi~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v 524 (563)
++.|++.+.++.|++.|+++.++|+.+...+..+.+.+|+......++.+.+.. .....|.-...++
T Consensus 95 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~-------------~~Kp~~~~~~~~~ 161 (232)
T 1zrn_A 95 APFSEVPDSLRELKRRGLKLAILSNGSPQSIDAVVSHAGLRDGFDHLLSVDPVQ-------------VYKPDNRVYELAE 161 (232)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSEEEESGGGT-------------CCTTSHHHHHHHH
T ss_pred CCCccHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHhcChHhhhheEEEecccC-------------CCCCCHHHHHHHH
Confidence 467999999999999999999999999999999999999865333333332211 1112233333444
Q ss_pred HHHHHhcCCEEEEEcCCccCHHHHhhCCceEeec
Q 044020 525 TQLRNTFGEVVAVTGDGTNDASALHEADIGLAMG 558 (563)
Q Consensus 525 ~~l~~~~g~~v~~iGDg~ND~~~l~~a~vgiamg 558 (563)
+.+.-. .+.+++|||+.||+.|.+.||++++|-
T Consensus 162 ~~~~~~-~~~~~~iGD~~~Di~~a~~aG~~~~~~ 194 (232)
T 1zrn_A 162 QALGLD-RSAILFVASNAWDATGARYFGFPTCWI 194 (232)
T ss_dssp HHHTSC-GGGEEEEESCHHHHHHHHHHTCCEEEE
T ss_pred HHcCCC-cccEEEEeCCHHHHHHHHHcCCEEEEE
Confidence 544433 468999999999999999999998883
|
| >2hcf_A Hydrolase, haloacid dehalogenase-like family; NP_662590.1, ST genomics, PSI-2, protein structure initiative; 1.80A {Chlorobaculum tepidum} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=98.22 E-value=3e-06 Score=79.21 Aligned_cols=97 Identities=21% Similarity=0.239 Sum_probs=69.5
Q ss_pred CCcchHHHHHHHHhC-CCeEEEEcCCCHHHHHHHHHHcCCCCCCCceeechhhhcCCCCCCCcceeEEEecChhhHHHHH
Q 044020 446 VRPGVKEAVQTCLEA-GITVRMVTGDNINTARAIAKECGILTSDGEAVEGPEFRNMSPADIIPKLQVMARSLPSDKHTLV 524 (563)
Q Consensus 446 ~~~~~~~~I~~l~~~-gi~v~i~TGd~~~~a~~~a~~lgi~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v 524 (563)
+.+++.+.++.|++. |+++.++|+.....+....+.+|+......++.+.+. . ..+..+..++
T Consensus 94 ~~~~~~~~l~~l~~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~~~~~~--------------~--~~~k~~~~~~ 157 (234)
T 2hcf_A 94 LLEGVRELLDALSSRSDVLLGLLTGNFEASGRHKLKLPGIDHYFPFGAFADDA--------------L--DRNELPHIAL 157 (234)
T ss_dssp ECTTHHHHHHHHHTCTTEEEEEECSSCHHHHHHHHHTTTCSTTCSCEECTTTC--------------S--SGGGHHHHHH
T ss_pred cCCCHHHHHHHHHhCCCceEEEEcCCcHHHHHHHHHHCCchhhcCcceecCCC--------------c--CccchHHHHH
Confidence 679999999999999 9999999999999999999999987533322222211 0 0122233443
Q ss_pred HHHHHhcC-----CEEEEEcCCccCHHHHhhCC---ceEeec
Q 044020 525 TQLRNTFG-----EVVAVTGDGTNDASALHEAD---IGLAMG 558 (563)
Q Consensus 525 ~~l~~~~g-----~~v~~iGDg~ND~~~l~~a~---vgiamg 558 (563)
+.+.+.+| +.+++|||+.||++|.+.|| ++|++|
T Consensus 158 ~~~~~~lg~~~~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~~ 199 (234)
T 2hcf_A 158 ERARRMTGANYSPSQIVIIGDTEHDIRCARELDARSIAVATG 199 (234)
T ss_dssp HHHHHHHCCCCCGGGEEEEESSHHHHHHHHTTTCEEEEECCS
T ss_pred HHHHHHhCCCCCcccEEEECCCHHHHHHHHHCCCcEEEEcCC
Confidence 44333334 68999999999999999999 555555
|
| >3l8h_A Putative haloacid dehalogenase-like hydrolase; HAD superfamily, GMHB, D-glycero-D-manno-heptose-1, 7-bispho phosphatase; HET: FX1; 1.68A {Bordetella bronchiseptica} | Back alignment and structure |
|---|
Probab=98.21 E-value=1.1e-06 Score=79.09 Aligned_cols=100 Identities=17% Similarity=0.124 Sum_probs=66.7
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCH---------------HHHHHHHHHcC--CCCCCCceee-chhhhcCCCCCCC
Q 044020 445 PVRPGVKEAVQTCLEAGITVRMVTGDNI---------------NTARAIAKECG--ILTSDGEAVE-GPEFRNMSPADII 506 (563)
Q Consensus 445 ~~~~~~~~~I~~l~~~gi~v~i~TGd~~---------------~~a~~~a~~lg--i~~~~~~~~~-g~~~~~~~~~~~~ 506 (563)
++.|++.++|++|+++|+++.++|+++. ..+....+.+| +......... +.+.
T Consensus 27 ~~~~g~~~~l~~L~~~g~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~--------- 97 (179)
T 3l8h_A 27 IALPGSLQAIARLTQADWTVVLATNQSGLARGLFDTATLNAIHDKMHRALAQMGGVVDAIFMCPHGPDDGC--------- 97 (179)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEECTTTTTTSSCHHHHHHHHHHHHHHHHHTTCCCCEEEEECCCTTSCC---------
T ss_pred eECcCHHHHHHHHHHCCCEEEEEECCCccccCcCCHHHHHHHHHHHHHHHHhCCCceeEEEEcCCCCCCCC---------
Confidence 5789999999999999999999999986 56677888888 5430000000 0000
Q ss_pred cceeEEEecChhhHHHHHHHHHHhcCCEEEEEcCCccCHHHHhhCCc---eEeec
Q 044020 507 PKLQVMARSLPSDKHTLVTQLRNTFGEVVAVTGDGTNDASALHEADI---GLAMG 558 (563)
Q Consensus 507 ~~~~v~~~~~p~~K~~~v~~l~~~~g~~v~~iGDg~ND~~~l~~a~v---giamg 558 (563)
......|+--..+++.+.-. .+.+++|||+.||+.|.+.||+ +|++|
T Consensus 98 ----~~~KP~~~~~~~~~~~~~~~-~~~~~~vGD~~~Di~~a~~aG~~~i~v~~g 147 (179)
T 3l8h_A 98 ----ACRKPLPGMYRDIARRYDVD-LAGVPAVGDSLRDLQAAAQAGCAPWLVQTG 147 (179)
T ss_dssp ----SSSTTSSHHHHHHHHHHTCC-CTTCEEEESSHHHHHHHHHHTCEEEEESTT
T ss_pred ----CCCCCCHHHHHHHHHHcCCC-HHHEEEECCCHHHHHHHHHCCCcEEEECCC
Confidence 00011222233444444443 5789999999999999999995 66665
|
| >3iru_A Phoshonoacetaldehyde hydrolase like protein; phosphonoacetaldehyde hydrolase like P structural genomics, PSI-2, protein structure initiative; 2.30A {Oleispira antarctica} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.21 E-value=1.3e-06 Score=84.01 Aligned_cols=100 Identities=16% Similarity=0.120 Sum_probs=73.0
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCC-CCceeechhhhcCCCCCCCcceeEEEecChhhHHHH
Q 044020 445 PVRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAKECGILTS-DGEAVEGPEFRNMSPADIIPKLQVMARSLPSDKHTL 523 (563)
Q Consensus 445 ~~~~~~~~~I~~l~~~gi~v~i~TGd~~~~a~~~a~~lgi~~~-~~~~~~g~~~~~~~~~~~~~~~~v~~~~~p~~K~~~ 523 (563)
.+.+++.+.++.|++.|+++.++|+.....+..+.+.+|+... ...++.+.... .....|.--..+
T Consensus 111 ~~~~~~~~~l~~l~~~g~~~~i~tn~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~-------------~~kp~~~~~~~~ 177 (277)
T 3iru_A 111 QLIPGWKEVFDKLIAQGIKVGGNTGYGPGMMAPALIAAKEQGYTPASTVFATDVV-------------RGRPFPDMALKV 177 (277)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHHHTTCCCSEEECGGGSS-------------SCTTSSHHHHHH
T ss_pred ccCcCHHHHHHHHHHcCCeEEEEeCCchHHHHHHHHhcCcccCCCceEecHHhcC-------------CCCCCHHHHHHH
Confidence 4678999999999999999999999999999999999887653 33333333211 011122333445
Q ss_pred HHHHHHhcC-CEEEEEcCCccCHHHHhhCC---ceEeec
Q 044020 524 VTQLRNTFG-EVVAVTGDGTNDASALHEAD---IGLAMG 558 (563)
Q Consensus 524 v~~l~~~~g-~~v~~iGDg~ND~~~l~~a~---vgiamg 558 (563)
++.+... . +.+++|||+.||+.|.+.|| ++|++|
T Consensus 178 ~~~lgi~-~~~~~i~vGD~~~Di~~a~~aG~~~v~v~~g 215 (277)
T 3iru_A 178 ALELEVG-HVNGCIKVDDTLPGIEEGLRAGMWTVGVSCS 215 (277)
T ss_dssp HHHHTCS-CGGGEEEEESSHHHHHHHHHTTCEEEEECSS
T ss_pred HHHcCCC-CCccEEEEcCCHHHHHHHHHCCCeEEEEecC
Confidence 5555544 5 78999999999999999999 567776
|
| >3u26_A PF00702 domain protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, unknown function; 1.59A {Pyrococcus horikoshii} SCOP: c.108.1.1 PDB: 1x42_A | Back alignment and structure |
|---|
Probab=98.20 E-value=2.2e-06 Score=80.22 Aligned_cols=101 Identities=19% Similarity=0.173 Sum_probs=72.3
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCceeechhhhcCCCCCCCcceeEEEecChhhHHHHH
Q 044020 445 PVRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAKECGILTSDGEAVEGPEFRNMSPADIIPKLQVMARSLPSDKHTLV 524 (563)
Q Consensus 445 ~~~~~~~~~I~~l~~~gi~v~i~TGd~~~~a~~~a~~lgi~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v 524 (563)
.+.+++.+.++.|++. +++.++|+.+...+....+.+|+......++.+.+.. .....|.--..++
T Consensus 100 ~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~~~~~f~~~~~~~~~~-------------~~kp~~~~~~~~~ 165 (234)
T 3u26_A 100 ELYPEVVEVLKSLKGK-YHVGMITDSDTEQAMAFLDALGIKDLFDSITTSEEAG-------------FFKPHPRIFELAL 165 (234)
T ss_dssp CBCTTHHHHHHHHTTT-SEEEEEESSCHHHHHHHHHHTTCGGGCSEEEEHHHHT-------------BCTTSHHHHHHHH
T ss_pred CcCcCHHHHHHHHHhC-CcEEEEECCCHHHHHHHHHHcCcHHHcceeEeccccC-------------CCCcCHHHHHHHH
Confidence 4678999999999999 9999999999999999999999865333333332211 0111222233444
Q ss_pred HHHHHhcCCEEEEEcCCc-cCHHHHhhCC---ceEeecCCC
Q 044020 525 TQLRNTFGEVVAVTGDGT-NDASALHEAD---IGLAMGIAG 561 (563)
Q Consensus 525 ~~l~~~~g~~v~~iGDg~-ND~~~l~~a~---vgiamg~~~ 561 (563)
+.+.-. .+.+++|||+. ||+.|.+.|| +++++| ++
T Consensus 166 ~~~~~~-~~~~~~vGD~~~~Di~~a~~aG~~~~~v~~~-~~ 204 (234)
T 3u26_A 166 KKAGVK-GEEAVYVGDNPVKDCGGSKNLGMTSILLDRK-GE 204 (234)
T ss_dssp HHHTCC-GGGEEEEESCTTTTHHHHHTTTCEEEEECSS-ST
T ss_pred HHcCCC-chhEEEEcCCcHHHHHHHHHcCCEEEEECCC-CC
Confidence 444433 47899999997 9999999999 577777 54
|
| >2no4_A (S)-2-haloacid dehalogenase IVA; HAD superfamily, rossman fold, hydrol; 1.93A {Burkholderia cepacia} PDB: 2no5_A* | Back alignment and structure |
|---|
Probab=98.16 E-value=2.3e-06 Score=80.70 Aligned_cols=98 Identities=12% Similarity=0.126 Sum_probs=70.7
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCceeechhhhcCCCCCCCcceeEEEecChhhHHHHH
Q 044020 445 PVRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAKECGILTSDGEAVEGPEFRNMSPADIIPKLQVMARSLPSDKHTLV 524 (563)
Q Consensus 445 ~~~~~~~~~I~~l~~~gi~v~i~TGd~~~~a~~~a~~lgi~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v 524 (563)
++.|++.+.++.|+++|+++.++|+.+...+..+.+.+|+......++.+.+.. .....|+-...++
T Consensus 105 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~-------------~~Kp~~~~~~~~~ 171 (240)
T 2no4_A 105 SAYPDAAETLEKLKSAGYIVAILSNGNDEMLQAALKASKLDRVLDSCLSADDLK-------------IYKPDPRIYQFAC 171 (240)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSEEEEGGGTT-------------CCTTSHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHhcCcHHHcCEEEEccccC-------------CCCCCHHHHHHHH
Confidence 477999999999999999999999999999999999999865433343333211 0111223333444
Q ss_pred HHHHHhcCCEEEEEcCCccCHHHHhhCCceEe
Q 044020 525 TQLRNTFGEVVAVTGDGTNDASALHEADIGLA 556 (563)
Q Consensus 525 ~~l~~~~g~~v~~iGDg~ND~~~l~~a~vgia 556 (563)
+.+... .+.+++|||+.||+.|.+.||+..+
T Consensus 172 ~~~~~~-~~~~~~iGD~~~Di~~a~~aG~~~~ 202 (240)
T 2no4_A 172 DRLGVN-PNEVCFVSSNAWDLGGAGKFGFNTV 202 (240)
T ss_dssp HHHTCC-GGGEEEEESCHHHHHHHHHHTCEEE
T ss_pred HHcCCC-cccEEEEeCCHHHHHHHHHCCCEEE
Confidence 444433 4689999999999999999996443
|
| >2hoq_A Putative HAD-hydrolase PH1655; haloacid dehalogenase, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.70A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=98.15 E-value=3.8e-06 Score=79.23 Aligned_cols=99 Identities=11% Similarity=0.058 Sum_probs=70.8
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCceeechhhhcCCCCCCCcceeEEEecChhhHHHHH
Q 044020 445 PVRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAKECGILTSDGEAVEGPEFRNMSPADIIPKLQVMARSLPSDKHTLV 524 (563)
Q Consensus 445 ~~~~~~~~~I~~l~~~gi~v~i~TGd~~~~a~~~a~~lgi~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v 524 (563)
.+.+++.+.++.|++.|+++.++|+.....+....+.+|+......++.+.+.. .....|+--..++
T Consensus 94 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~-------------~~Kp~~~~~~~~~ 160 (241)
T 2hoq_A 94 REVPGARKVLIRLKELGYELGIITDGNPVKQWEKILRLELDDFFEHVIISDFEG-------------VKKPHPKIFKKAL 160 (241)
T ss_dssp CBCTTHHHHHHHHHHHTCEEEEEECSCHHHHHHHHHHTTCGGGCSEEEEGGGGT-------------CCTTCHHHHHHHH
T ss_pred CCCccHHHHHHHHHHCCCEEEEEECCCchhHHHHHHHcCcHhhccEEEEeCCCC-------------CCCCCHHHHHHHH
Confidence 367899999999999999999999999988999999999875433333333211 0011222223344
Q ss_pred HHHHHhcCCEEEEEcCCc-cCHHHHhhCCceEee
Q 044020 525 TQLRNTFGEVVAVTGDGT-NDASALHEADIGLAM 557 (563)
Q Consensus 525 ~~l~~~~g~~v~~iGDg~-ND~~~l~~a~vgiam 557 (563)
+.+... .+.+++|||+. ||+.|.+.||++++.
T Consensus 161 ~~~g~~-~~~~i~iGD~~~~Di~~a~~aG~~~~~ 193 (241)
T 2hoq_A 161 KAFNVK-PEEALMVGDRLYSDIYGAKRVGMKTVW 193 (241)
T ss_dssp HHHTCC-GGGEEEEESCTTTTHHHHHHTTCEEEE
T ss_pred HHcCCC-cccEEEECCCchHhHHHHHHCCCEEEE
Confidence 444333 46899999998 999999999997554
|
| >3qxg_A Inorganic pyrophosphatase; hydrolase, magnesium binding site, NEW YORK research center for structural genomics; HET: TLA; 1.24A {Bacteroides thetaiotaomicron} PDB: 3qu2_A* 3qx7_A 3quq_A* 3r9k_A 3qut_A 3qu9_A* 3qu7_A 3qu5_A 3qyp_A 3quc_A 3qub_A 3qu4_A | Back alignment and structure |
|---|
Probab=98.14 E-value=1.7e-06 Score=81.71 Aligned_cols=99 Identities=17% Similarity=0.130 Sum_probs=70.0
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCC--CceeechhhhcCCCCCCCcceeEEEecChhhHHH
Q 044020 445 PVRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAKECGILTSD--GEAVEGPEFRNMSPADIIPKLQVMARSLPSDKHT 522 (563)
Q Consensus 445 ~~~~~~~~~I~~l~~~gi~v~i~TGd~~~~a~~~a~~lgi~~~~--~~~~~g~~~~~~~~~~~~~~~~v~~~~~p~~K~~ 522 (563)
.+.+++.+.++.|++.|+++.++|+.....+....+. |+.... ..++.+.+.. .....|+--..
T Consensus 109 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~-~l~~~f~~d~i~~~~~~~-------------~~kp~~~~~~~ 174 (243)
T 3qxg_A 109 ERMPGAWELLQKVKSEGLTPMVVTGSGQLSLLERLEH-NFPGMFHKELMVTAFDVK-------------YGKPNPEPYLM 174 (243)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECCCCCHHHHTTHHH-HSTTTCCGGGEECTTTCS-------------SCTTSSHHHHH
T ss_pred CCCCCHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHH-hHHHhcCcceEEeHHhCC-------------CCCCChHHHHH
Confidence 4678999999999999999999999988888777777 887644 4444443321 01112233333
Q ss_pred HHHHHHHhcCCEEEEEcCCccCHHHHhhCCc-eEeec
Q 044020 523 LVTQLRNTFGEVVAVTGDGTNDASALHEADI-GLAMG 558 (563)
Q Consensus 523 ~v~~l~~~~g~~v~~iGDg~ND~~~l~~a~v-giamg 558 (563)
+++.+... .+.+++|||+.||+.|.+.||+ +|.+.
T Consensus 175 ~~~~lg~~-~~~~i~vGD~~~Di~~a~~aG~~~i~v~ 210 (243)
T 3qxg_A 175 ALKKGGLK-ADEAVVIENAPLGVEAGHKAGIFTIAVN 210 (243)
T ss_dssp HHHHTTCC-GGGEEEEECSHHHHHHHHHTTCEEEEEC
T ss_pred HHHHcCCC-HHHeEEEeCCHHHHHHHHHCCCEEEEEe
Confidence 44444333 4789999999999999999999 45554
|
| >2i6x_A Hydrolase, haloacid dehalogenase-like family; HAD superfamily, struct genomics, PSI-2, protein structure initiative; HET: MSE; 2.40A {Porphyromonas gingivalis} | Back alignment and structure |
|---|
Probab=98.13 E-value=1.1e-06 Score=80.96 Aligned_cols=101 Identities=4% Similarity=-0.053 Sum_probs=70.7
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHH------cCCCCCCCceeechhhhcCCCCCCCcceeEEEecChh
Q 044020 445 PVRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAKE------CGILTSDGEAVEGPEFRNMSPADIIPKLQVMARSLPS 518 (563)
Q Consensus 445 ~~~~~~~~~I~~l~~~gi~v~i~TGd~~~~a~~~a~~------lgi~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~p~ 518 (563)
++.|++.++++.|++ |++++++|+.+...+..+.+. +|+......++.+.+.. .....|+
T Consensus 89 ~~~~~~~~~l~~l~~-g~~~~i~t~~~~~~~~~~~~~l~~~~~~~l~~~f~~~~~~~~~~-------------~~Kp~~~ 154 (211)
T 2i6x_A 89 EISAEKFDYIDSLRP-DYRLFLLSNTNPYVLDLAMSPRFLPSGRTLDSFFDKVYASCQMG-------------KYKPNED 154 (211)
T ss_dssp EECHHHHHHHHHHTT-TSEEEEEECCCHHHHHHHTSTTSSTTCCCGGGGSSEEEEHHHHT-------------CCTTSHH
T ss_pred ccChHHHHHHHHHHc-CCeEEEEeCCCHHHHHHHHhhhccccccCHHHHcCeEEeecccC-------------CCCCCHH
Confidence 467899999999999 999999999998888888777 67654322332222210 0111222
Q ss_pred hHHHHHHHHHHhcCCEEEEEcCCccCHHHHhhCCceEeecCCC
Q 044020 519 DKHTLVTQLRNTFGEVVAVTGDGTNDASALHEADIGLAMGIAG 561 (563)
Q Consensus 519 ~K~~~v~~l~~~~g~~v~~iGDg~ND~~~l~~a~vgiamg~~~ 561 (563)
--..+++.+.-. .+.+++|||+.||+.|.+.||++++|. ++
T Consensus 155 ~~~~~~~~~~~~-~~~~~~igD~~~Di~~a~~aG~~~~~~-~~ 195 (211)
T 2i6x_A 155 IFLEMIADSGMK-PEETLFIDDGPANVATAERLGFHTYCP-DN 195 (211)
T ss_dssp HHHHHHHHHCCC-GGGEEEECSCHHHHHHHHHTTCEEECC-CT
T ss_pred HHHHHHHHhCCC-hHHeEEeCCCHHHHHHHHHcCCEEEEE-CC
Confidence 333444444433 478999999999999999999999998 44
|
| >3cnh_A Hydrolase family protein; NP_295428.1, predicted hydrolase of haloacid dehalogenase-LI superfamily; HET: MSE PG4; 1.66A {Deinococcus radiodurans R1} | Back alignment and structure |
|---|
Probab=98.13 E-value=2.7e-06 Score=77.61 Aligned_cols=98 Identities=9% Similarity=0.008 Sum_probs=72.2
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCceeechhhhcCCCCCCCcceeEEEecChhhHHHHHH
Q 044020 446 VRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAKECGILTSDGEAVEGPEFRNMSPADIIPKLQVMARSLPSDKHTLVT 525 (563)
Q Consensus 446 ~~~~~~~~I~~l~~~gi~v~i~TGd~~~~a~~~a~~lgi~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~ 525 (563)
+.|++.+.++.|++.| +++++|+.+........+.+|+......++.+.+.. .....|+--..+++
T Consensus 87 ~~~~~~~~l~~l~~~g-~~~i~s~~~~~~~~~~l~~~~~~~~f~~~~~~~~~~-------------~~Kp~~~~~~~~~~ 152 (200)
T 3cnh_A 87 PRPEVLALARDLGQRY-RMYSLNNEGRDLNEYRIRTFGLGEFLLAFFTSSALG-------------VMKPNPAMYRLGLT 152 (200)
T ss_dssp BCHHHHHHHHHHTTTS-EEEEEECCCHHHHHHHHHHHTGGGTCSCEEEHHHHS-------------CCTTCHHHHHHHHH
T ss_pred cCccHHHHHHHHHHcC-CEEEEeCCcHHHHHHHHHhCCHHHhcceEEeecccC-------------CCCCCHHHHHHHHH
Confidence 6799999999999999 999999999999999999999865433343333221 11122333334444
Q ss_pred HHHHhcCCEEEEEcCCccCHHHHhhCCceEeec
Q 044020 526 QLRNTFGEVVAVTGDGTNDASALHEADIGLAMG 558 (563)
Q Consensus 526 ~l~~~~g~~v~~iGDg~ND~~~l~~a~vgiamg 558 (563)
.+... .+.+++|||+.||+.|.+.||+..++-
T Consensus 153 ~~~~~-~~~~~~vgD~~~Di~~a~~aG~~~~~~ 184 (200)
T 3cnh_A 153 LAQVR-PEEAVMVDDRLQNVQAARAVGMHAVQC 184 (200)
T ss_dssp HHTCC-GGGEEEEESCHHHHHHHHHTTCEEEEC
T ss_pred HcCCC-HHHeEEeCCCHHHHHHHHHCCCEEEEE
Confidence 44433 478999999999999999999988764
|
| >3dv9_A Beta-phosphoglucomutase; structural genomics, APC60149, PSI- protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.72A {Bacteroides vulgatus} | Back alignment and structure |
|---|
Probab=98.12 E-value=3e-06 Score=79.96 Aligned_cols=100 Identities=15% Similarity=0.074 Sum_probs=68.8
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCC--CceeechhhhcCCCCCCCcceeEEEecChhhHH
Q 044020 444 DPVRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAKECGILTSD--GEAVEGPEFRNMSPADIIPKLQVMARSLPSDKH 521 (563)
Q Consensus 444 d~~~~~~~~~I~~l~~~gi~v~i~TGd~~~~a~~~a~~lgi~~~~--~~~~~g~~~~~~~~~~~~~~~~v~~~~~p~~K~ 521 (563)
.++.+++.+.++.|++.|+++.++|+.....+....+. |+.... ..++.+.+.. .....|.--.
T Consensus 107 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~-~l~~~f~~~~~~~~~~~~-------------~~kp~~~~~~ 172 (247)
T 3dv9_A 107 AERMPGALEVLTKIKSEGLTPMVVTGSGQTSLLDRLNH-NFPGIFQANLMVTAFDVK-------------YGKPNPEPYL 172 (247)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEECSCC---CHHHHHH-HSTTTCCGGGEECGGGCS-------------SCTTSSHHHH
T ss_pred CCCCCCHHHHHHHHHHcCCcEEEEcCCchHHHHHHHHh-hHHHhcCCCeEEecccCC-------------CCCCCCHHHH
Confidence 35779999999999999999999999988888888887 887644 4444443321 1112233334
Q ss_pred HHHHHHHHhcCCEEEEEcCCccCHHHHhhCCce-Eeec
Q 044020 522 TLVTQLRNTFGEVVAVTGDGTNDASALHEADIG-LAMG 558 (563)
Q Consensus 522 ~~v~~l~~~~g~~v~~iGDg~ND~~~l~~a~vg-iamg 558 (563)
.+++.+.-. .+.+++|||+.||+.|.+.||+. |.+.
T Consensus 173 ~~~~~lg~~-~~~~i~vGD~~~Di~~a~~aG~~~i~v~ 209 (247)
T 3dv9_A 173 MALKKGGFK-PNEALVIENAPLGVQAGVAAGIFTIAVN 209 (247)
T ss_dssp HHHHHHTCC-GGGEEEEECSHHHHHHHHHTTSEEEEEC
T ss_pred HHHHHcCCC-hhheEEEeCCHHHHHHHHHCCCeEEEEc
Confidence 445554443 47899999999999999999974 4443
|
| >3sd7_A Putative phosphatase; structural genomics, haloacid dehalogenase-like hydrolase, H center for structural genomics of infectious diseases; HET: PGE; 1.70A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=98.11 E-value=1.3e-06 Score=82.31 Aligned_cols=97 Identities=15% Similarity=0.141 Sum_probs=72.9
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCceeechhhhcCCCCCCCcceeEEEecChhhHHHHH
Q 044020 445 PVRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAKECGILTSDGEAVEGPEFRNMSPADIIPKLQVMARSLPSDKHTLV 524 (563)
Q Consensus 445 ~~~~~~~~~I~~l~~~gi~v~i~TGd~~~~a~~~a~~lgi~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v 524 (563)
++.+++.++++.|++.|++++++|+.....+..+.+.+|+......++.+... .....|..++
T Consensus 110 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~-----------------~~~kp~~~~~ 172 (240)
T 3sd7_A 110 KIYENMKEILEMLYKNGKILLVATSKPTVFAETILRYFDIDRYFKYIAGSNLD-----------------GTRVNKNEVI 172 (240)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCGGGCSEEEEECTT-----------------SCCCCHHHHH
T ss_pred ccCccHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHcCcHhhEEEEEecccc-----------------CCCCCCHHHH
Confidence 47899999999999999999999999999999999999986533222222111 0112355555
Q ss_pred HHHHHhcC----CEEEEEcCCccCHHHHhhCCc---eEeec
Q 044020 525 TQLRNTFG----EVVAVTGDGTNDASALHEADI---GLAMG 558 (563)
Q Consensus 525 ~~l~~~~g----~~v~~iGDg~ND~~~l~~a~v---giamg 558 (563)
+.+.+.+| +.+++|||+.||+.|.+.||+ ++++|
T Consensus 173 ~~~~~~~g~~~~~~~i~vGD~~~Di~~a~~aG~~~i~v~~g 213 (240)
T 3sd7_A 173 QYVLDLCNVKDKDKVIMVGDRKYDIIGAKKIGIDSIGVLYG 213 (240)
T ss_dssp HHHHHHHTCCCGGGEEEEESSHHHHHHHHHHTCEEEEESSS
T ss_pred HHHHHHcCCCCCCcEEEECCCHHHHHHHHHCCCCEEEEeCC
Confidence 55554433 479999999999999999999 77777
|
| >2fi1_A Hydrolase, haloacid dehalogenase-like family; structural genomics, haloacid dehalogenase-like F PSI, protein structure initiative; 1.40A {Streptococcus pneumoniae} SCOP: c.108.1.3 | Back alignment and structure |
|---|
Probab=98.09 E-value=3.8e-06 Score=75.87 Aligned_cols=95 Identities=18% Similarity=0.122 Sum_probs=67.2
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCceeechhhhcCCCCCCCcceeEEEecChhhHHHHHH
Q 044020 446 VRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAKECGILTSDGEAVEGPEFRNMSPADIIPKLQVMARSLPSDKHTLVT 525 (563)
Q Consensus 446 ~~~~~~~~I~~l~~~gi~v~i~TGd~~~~a~~~a~~lgi~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~ 525 (563)
+.+++.+.++.|++.|++++++|+.+. .+....+.+|+......++.+.+. . . ...|...++
T Consensus 83 ~~~~~~~~l~~l~~~g~~~~i~t~~~~-~~~~~l~~~~~~~~f~~~~~~~~~--------------~-~--~kp~~~~~~ 144 (190)
T 2fi1_A 83 LFEGVSDLLEDISNQGGRHFLVSHRND-QVLEILEKTSIAAYFTEVVTSSSG--------------F-K--RKPNPESML 144 (190)
T ss_dssp BCTTHHHHHHHHHHTTCEEEEECSSCT-HHHHHHHHTTCGGGEEEEECGGGC--------------C-C--CTTSCHHHH
T ss_pred cCcCHHHHHHHHHHCCCcEEEEECCcH-HHHHHHHHcCCHhheeeeeecccc--------------C-C--CCCCHHHHH
Confidence 578999999999999999999999864 577888888876432222222211 0 0 112233444
Q ss_pred HHHHhcCC-EEEEEcCCccCHHHHhhCCceEeec
Q 044020 526 QLRNTFGE-VVAVTGDGTNDASALHEADIGLAMG 558 (563)
Q Consensus 526 ~l~~~~g~-~v~~iGDg~ND~~~l~~a~vgiamg 558 (563)
.+.+++|- .+++|||+.||++|++.||+++++-
T Consensus 145 ~~~~~~~~~~~~~iGD~~~Di~~a~~aG~~~~~~ 178 (190)
T 2fi1_A 145 YLREKYQISSGLVIGDRPIDIEAGQAAGLDTHLF 178 (190)
T ss_dssp HHHHHTTCSSEEEEESSHHHHHHHHHTTCEEEEC
T ss_pred HHHHHcCCCeEEEEcCCHHHHHHHHHcCCeEEEE
Confidence 44444332 7999999999999999999998886
|
| >2hi0_A Putative phosphoglycolate phosphatase; YP_619066.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.51A {Lactobacillus delbrueckii} | Back alignment and structure |
|---|
Probab=98.08 E-value=2.4e-06 Score=80.74 Aligned_cols=98 Identities=14% Similarity=0.155 Sum_probs=70.5
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCceeechhhhcCCCCCCCcceeEEEecChhhHHHHHH
Q 044020 446 VRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAKECGILTSDGEAVEGPEFRNMSPADIIPKLQVMARSLPSDKHTLVT 525 (563)
Q Consensus 446 ~~~~~~~~I~~l~~~gi~v~i~TGd~~~~a~~~a~~lgi~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~ 525 (563)
+.|++.+.++.|+++|+++.++|+.+...+....+.+|+. ....++.+.+.. .....|+--..+++
T Consensus 111 ~~~g~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~-~f~~~~~~~~~~-------------~~Kp~p~~~~~~~~ 176 (240)
T 2hi0_A 111 PFPGILDLMKNLRQKGVKLAVVSNKPNEAVQVLVEELFPG-SFDFALGEKSGI-------------RRKPAPDMTSECVK 176 (240)
T ss_dssp ECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHSTT-TCSEEEEECTTS-------------CCTTSSHHHHHHHH
T ss_pred cCCCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCc-ceeEEEecCCCC-------------CCCCCHHHHHHHHH
Confidence 5688999999999999999999999888889999999976 444444333210 11112232334444
Q ss_pred HHHHhcCCEEEEEcCCccCHHHHhhCCce---Eeec
Q 044020 526 QLRNTFGEVVAVTGDGTNDASALHEADIG---LAMG 558 (563)
Q Consensus 526 ~l~~~~g~~v~~iGDg~ND~~~l~~a~vg---iamg 558 (563)
.+.-. .+.+++|||+.||+.|.+.||+. +++|
T Consensus 177 ~l~~~-~~~~~~vGDs~~Di~~a~~aG~~~v~v~~~ 211 (240)
T 2hi0_A 177 VLGVP-RDKCVYIGDSEIDIQTARNSEMDEIAVNWG 211 (240)
T ss_dssp HHTCC-GGGEEEEESSHHHHHHHHHTTCEEEEESSS
T ss_pred HcCCC-HHHeEEEcCCHHHHHHHHHCCCeEEEECCC
Confidence 44433 47899999999999999999994 5555
|
| >2fea_A 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; 2633731, structural genomics, joint center for structural GE JCSG; HET: MSE; 2.00A {Bacillus subtilis} SCOP: c.108.1.20 | Back alignment and structure |
|---|
Probab=98.06 E-value=3.8e-06 Score=79.17 Aligned_cols=109 Identities=17% Similarity=0.164 Sum_probs=75.8
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCceeechhhhcCCCC--C-CCcceeEEEecChhhHH
Q 044020 445 PVRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAKECGILTSDGEAVEGPEFRNMSPA--D-IIPKLQVMARSLPSDKH 521 (563)
Q Consensus 445 ~~~~~~~~~I~~l~~~gi~v~i~TGd~~~~a~~~a~~lgi~~~~~~~~~g~~~~~~~~~--~-~~~~~~v~~~~~p~~K~ 521 (563)
++.|++.++|+.|+++|++++++|+.+...+..+++ |+... ..++.+.....-..- . -.+.-..+.+-....|.
T Consensus 77 ~~~pg~~~~l~~L~~~g~~~~ivS~~~~~~~~~~l~--~l~~~-~~v~~~~~~~~~~~~~~~~~kp~p~~~~~~~~~~K~ 153 (236)
T 2fea_A 77 KIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLE--GIVEK-DRIYCNHASFDNDYIHIDWPHSCKGTCSNQCGCCKP 153 (236)
T ss_dssp CBCTTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHT--TTSCG-GGEEEEEEECSSSBCEEECTTCCCTTCCSCCSSCHH
T ss_pred CCCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHh--cCCCC-CeEEeeeeEEcCCceEEecCCCCccccccccCCcHH
Confidence 488999999999999999999999999988888888 77543 444443322110000 0 00000000011245688
Q ss_pred HHHHHHHHhcCCEEEEEcCCccCHHHHhhCCceEee
Q 044020 522 TLVTQLRNTFGEVVAVTGDGTNDASALHEADIGLAM 557 (563)
Q Consensus 522 ~~v~~l~~~~g~~v~~iGDg~ND~~~l~~a~vgiam 557 (563)
.+++.+... .+.+++|||+.+|+.|.+.||+.++.
T Consensus 154 ~~~~~~~~~-~~~~~~vGDs~~Di~~a~~aG~~~~~ 188 (236)
T 2fea_A 154 SVIHELSEP-NQYIIMIGDSVTDVEAAKLSDLCFAR 188 (236)
T ss_dssp HHHHHHCCT-TCEEEEEECCGGGHHHHHTCSEEEEC
T ss_pred HHHHHHhcc-CCeEEEEeCChHHHHHHHhCCeeeec
Confidence 888888766 78999999999999999999998764
|
| >1y8a_A Hypothetical protein AF1437; structural genomics, protein structu initiative, PSI, midwest center for structural genomics; 1.40A {Archaeoglobus fulgidus} SCOP: c.108.1.24 | Back alignment and structure |
|---|
Probab=98.06 E-value=5.7e-06 Score=82.35 Aligned_cols=108 Identities=16% Similarity=0.190 Sum_probs=69.4
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCceeec-hhhhcCCC------------CCCCcc---
Q 044020 445 PVRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAKECGILTSDGEAVEG-PEFRNMSP------------ADIIPK--- 508 (563)
Q Consensus 445 ~~~~~~~~~I~~l~~~gi~v~i~TGd~~~~a~~~a~~lgi~~~~~~~~~g-~~~~~~~~------------~~~~~~--- 508 (563)
.+.+++.++++.|++ |+.+.++|++...-+...++.+++... .... ........ ......
T Consensus 103 ~~~~~~~~~l~~l~~-g~~~~i~t~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~ 178 (332)
T 1y8a_A 103 KFVPDAEKAMATLQE-RWTPVVISTSYTQYLRRTASMIGVRGE---LHGTEVDFDSIAVPEGLREELLSIIDVIASLSGE 178 (332)
T ss_dssp CBCTTHHHHHHHHHT-TCEEEEEEEEEHHHHHHHHHHTTCCSE---EEEEBCCGGGCCCCHHHHHHHHHHHHHHHHCCHH
T ss_pred CCHHHHHHHHHHHHc-CCcEEEEECCceEEEcccchhhhhhhh---hcccccchhhhccccccceeEEecCHHHHhhhhH
Confidence 468999999999999 999999999986667777787777321 1110 00000000 000000
Q ss_pred ------------e--eEEE----ecChhhHHHHHHHHHHhcC--CEEEEEcCCccCHHHHhhC----CceEee
Q 044020 509 ------------L--QVMA----RSLPSDKHTLVTQLRNTFG--EVVAVTGDGTNDASALHEA----DIGLAM 557 (563)
Q Consensus 509 ------------~--~v~~----~~~p~~K~~~v~~l~~~~g--~~v~~iGDg~ND~~~l~~a----~vgiam 557 (563)
. ..+. ...+.+|...++.+... . +.|+++||+.||++||+.| |+||||
T Consensus 179 ~~l~~~~~~~~~s~~~~~~e~ii~~~g~~K~~al~gi~~~-~~~~~via~GDs~NDi~ml~~A~~~~g~~vam 250 (332)
T 1y8a_A 179 ELFRKLDELFSRSEVRKIVESVKAVGAGEKAKIMRGYCES-KGIDFPVVVGDSISDYKMFEAARGLGGVAIAF 250 (332)
T ss_dssp HHHHHHHHHHHSHHHHHHHHTCBCCCHHHHHHHHHHHHHH-HTCSSCEEEECSGGGHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHHhhcCCCceeeEEecCCCCCHHHHHhccChh-hcCceEEEEeCcHhHHHHHHHHhhcCCeEEEe
Confidence 0 0011 11245688888766543 1 3399999999999999999 999999
|
| >3ddh_A Putative haloacid dehalogenase-like family hydrol; hydrolase, HAD superfamily, ST genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=98.05 E-value=5.2e-06 Score=77.34 Aligned_cols=91 Identities=15% Similarity=0.155 Sum_probs=69.8
Q ss_pred CCCcchHHHHHHHHhCC-CeEEEEcCCCHHHHHHHHHHcCCCCCCCceeechhhhcCCCCCCCcceeEEEecChhhHHHH
Q 044020 445 PVRPGVKEAVQTCLEAG-ITVRMVTGDNINTARAIAKECGILTSDGEAVEGPEFRNMSPADIIPKLQVMARSLPSDKHTL 523 (563)
Q Consensus 445 ~~~~~~~~~I~~l~~~g-i~v~i~TGd~~~~a~~~a~~lgi~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~p~~K~~~ 523 (563)
.+.+++.+.++.|++.| +++.++|+..........+.+|+...... ++... ..|...
T Consensus 105 ~~~~~~~~~l~~l~~~g~~~~~i~t~~~~~~~~~~l~~~~~~~~f~~--------------------~~~~~--kpk~~~ 162 (234)
T 3ddh_A 105 ELLPGVKETLKTLKETGKYKLVVATKGDLLDQENKLERSGLSPYFDH--------------------IEVMS--DKTEKE 162 (234)
T ss_dssp CBCTTHHHHHHHHHHHCCCEEEEEEESCHHHHHHHHHHHTCGGGCSE--------------------EEEES--CCSHHH
T ss_pred CcCccHHHHHHHHHhCCCeEEEEEeCCchHHHHHHHHHhCcHhhhhe--------------------eeecC--CCCHHH
Confidence 46789999999999999 99999999999888999999998542211 22222 224444
Q ss_pred HHHHHHhcC---CEEEEEcCCc-cCHHHHhhCCceEee
Q 044020 524 VTQLRNTFG---EVVAVTGDGT-NDASALHEADIGLAM 557 (563)
Q Consensus 524 v~~l~~~~g---~~v~~iGDg~-ND~~~l~~a~vgiam 557 (563)
++.+.+++| +.+++|||+. ||+.|.+.||++++|
T Consensus 163 ~~~~~~~lgi~~~~~i~iGD~~~~Di~~a~~aG~~~v~ 200 (234)
T 3ddh_A 163 YLRLLSILQIAPSELLMVGNSFKSDIQPVLSLGGYGVH 200 (234)
T ss_dssp HHHHHHHHTCCGGGEEEEESCCCCCCHHHHHHTCEEEE
T ss_pred HHHHHHHhCCCcceEEEECCCcHHHhHHHHHCCCeEEE
Confidence 444444434 7899999996 999999999998887
|
| >4eek_A Beta-phosphoglucomutase-related protein; hydrolase, magnesium binding site, enzyme function initiativ; 1.60A {Deinococcus radiodurans} PDB: 4eel_A* 4een_A | Back alignment and structure |
|---|
Probab=98.05 E-value=1.6e-06 Score=82.91 Aligned_cols=100 Identities=15% Similarity=0.093 Sum_probs=70.2
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCc-eeechhhhcCCCCCCCcceeEEEecChhhHHHHH
Q 044020 446 VRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAKECGILTSDGE-AVEGPEFRNMSPADIIPKLQVMARSLPSDKHTLV 524 (563)
Q Consensus 446 ~~~~~~~~I~~l~~~gi~v~i~TGd~~~~a~~~a~~lgi~~~~~~-~~~g~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v 524 (563)
+.+++.++++.|++.|++++++|+.....+....+.+|+...... ++.+.+.. ......|+--..++
T Consensus 111 ~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~i~~~~~~~------------~~~Kp~~~~~~~~~ 178 (259)
T 4eek_A 111 AIEGAAETLRALRAAGVPFAIGSNSERGRLHLKLRVAGLTELAGEHIYDPSWVG------------GRGKPHPDLYTFAA 178 (259)
T ss_dssp ECTTHHHHHHHHHHHTCCEEEECSSCHHHHHHHHHHTTCHHHHCSCEECGGGGT------------TCCTTSSHHHHHHH
T ss_pred cCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHhcChHhhccceEEeHhhcC------------cCCCCChHHHHHHH
Confidence 678999999999999999999999999999999999998642222 33332211 01111222223333
Q ss_pred HHHHHhcCCEEEEEcCCccCHHHHhhCCce-Eeec
Q 044020 525 TQLRNTFGEVVAVTGDGTNDASALHEADIG-LAMG 558 (563)
Q Consensus 525 ~~l~~~~g~~v~~iGDg~ND~~~l~~a~vg-iamg 558 (563)
+.+... .+.+++|||+.||+.|.+.||++ |.+.
T Consensus 179 ~~lgi~-~~~~i~iGD~~~Di~~a~~aG~~~i~v~ 212 (259)
T 4eek_A 179 QQLGIL-PERCVVIEDSVTGGAAGLAAGATLWGLL 212 (259)
T ss_dssp HHTTCC-GGGEEEEESSHHHHHHHHHHTCEEEEEC
T ss_pred HHcCCC-HHHEEEEcCCHHHHHHHHHCCCEEEEEc
Confidence 433332 37899999999999999999998 4443
|
| >1qq5_A Protein (L-2-haloacid dehalogenase); hydrolase; 1.52A {Xanthobacter autotrophicus} SCOP: c.108.1.1 PDB: 1qq6_A* 1qq7_A* 1aq6_A | Back alignment and structure |
|---|
Probab=98.02 E-value=5.2e-06 Score=79.00 Aligned_cols=98 Identities=11% Similarity=0.100 Sum_probs=71.9
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCceeechhhhcCCCCCCCcceeEEEecChhhHHHHH
Q 044020 445 PVRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAKECGILTSDGEAVEGPEFRNMSPADIIPKLQVMARSLPSDKHTLV 524 (563)
Q Consensus 445 ~~~~~~~~~I~~l~~~gi~v~i~TGd~~~~a~~~a~~lgi~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v 524 (563)
++.|++.+.++.|+ |+++.++|+.+...+..+.+.+|+......++.+.+.. .....|.--..++
T Consensus 93 ~~~~~~~~~l~~l~--g~~~~i~t~~~~~~~~~~l~~~gl~~~f~~~~~~~~~~-------------~~Kp~~~~~~~~~ 157 (253)
T 1qq5_A 93 TPYPDAAQCLAELA--PLKRAILSNGAPDMLQALVANAGLTDSFDAVISVDAKR-------------VFKPHPDSYALVE 157 (253)
T ss_dssp CBCTTHHHHHHHHT--TSEEEEEESSCHHHHHHHHHHTTCGGGCSEEEEGGGGT-------------CCTTSHHHHHHHH
T ss_pred CCCccHHHHHHHHc--CCCEEEEeCcCHHHHHHHHHHCCchhhccEEEEccccC-------------CCCCCHHHHHHHH
Confidence 57799999999999 99999999999999999999999865433333333211 0111222333444
Q ss_pred HHHHHhcCCEEEEEcCCccCHHHHhhCCceEeec
Q 044020 525 TQLRNTFGEVVAVTGDGTNDASALHEADIGLAMG 558 (563)
Q Consensus 525 ~~l~~~~g~~v~~iGDg~ND~~~l~~a~vgiamg 558 (563)
+.+.-. .+.+++|||+.||+.|.+.||++++|.
T Consensus 158 ~~~~~~-~~~~~~vGD~~~Di~~a~~aG~~~~~~ 190 (253)
T 1qq5_A 158 EVLGVT-PAEVLFVSSNGFDVGGAKNFGFSVARV 190 (253)
T ss_dssp HHHCCC-GGGEEEEESCHHHHHHHHHHTCEEEEE
T ss_pred HHcCCC-HHHEEEEeCChhhHHHHHHCCCEEEEE
Confidence 444333 468999999999999999999999887
|
| >2hdo_A Phosphoglycolate phosphatase; NP_784602.1, structur genomics, PSI-2, protein structure initiative, joint center structural genomics; HET: MSE; 1.50A {Lactobacillus plantarum} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=98.02 E-value=1.2e-06 Score=80.66 Aligned_cols=99 Identities=11% Similarity=0.195 Sum_probs=69.7
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCceeechhhhcCCCCCCCcceeEEEecChhhHHHHH
Q 044020 445 PVRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAKECGILTSDGEAVEGPEFRNMSPADIIPKLQVMARSLPSDKHTLV 524 (563)
Q Consensus 445 ~~~~~~~~~I~~l~~~gi~v~i~TGd~~~~a~~~a~~lgi~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v 524 (563)
++.+++.+.++.|++. +++.++|+.+...+..+.+.+|+......++.+.+.. .....|+--..++
T Consensus 83 ~~~~~~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~-------------~~KP~~~~~~~~~ 148 (209)
T 2hdo_A 83 ELYPGITSLFEQLPSE-LRLGIVTSQRRNELESGMRSYPFMMRMAVTISADDTP-------------KRKPDPLPLLTAL 148 (209)
T ss_dssp EECTTHHHHHHHSCTT-SEEEEECSSCHHHHHHHHTTSGGGGGEEEEECGGGSS-------------CCTTSSHHHHHHH
T ss_pred CcCCCHHHHHHHHHhc-CcEEEEeCCCHHHHHHHHHHcChHhhccEEEecCcCC-------------CCCCCcHHHHHHH
Confidence 4688999999999999 9999999999999999999988754222222222110 0011122223344
Q ss_pred HHHHHhcCCEEEEEcCCccCHHHHhhCCceEeec
Q 044020 525 TQLRNTFGEVVAVTGDGTNDASALHEADIGLAMG 558 (563)
Q Consensus 525 ~~l~~~~g~~v~~iGDg~ND~~~l~~a~vgiamg 558 (563)
+.+... .+.+++|||+.||++|.+.||++++|.
T Consensus 149 ~~~~~~-~~~~i~vGD~~~Di~~a~~aG~~~~~~ 181 (209)
T 2hdo_A 149 EKVNVA-PQNALFIGDSVSDEQTAQAANVDFGLA 181 (209)
T ss_dssp HHTTCC-GGGEEEEESSHHHHHHHHHHTCEEEEE
T ss_pred HHcCCC-cccEEEECCChhhHHHHHHcCCeEEEE
Confidence 444332 478999999999999999999999975
|
| >2w43_A Hypothetical 2-haloalkanoic acid dehalogenase; hydrolase, metabolic process; HET: MES; 1.66A {Sulfolobus tokodaii} PDB: 2w11_A | Back alignment and structure |
|---|
Probab=98.01 E-value=6.8e-06 Score=75.08 Aligned_cols=95 Identities=11% Similarity=0.101 Sum_probs=69.9
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCceeechhhhcCCCCCCCcceeEEEecChhhHHHHH
Q 044020 445 PVRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAKECGILTSDGEAVEGPEFRNMSPADIIPKLQVMARSLPSDKHTLV 524 (563)
Q Consensus 445 ~~~~~~~~~I~~l~~~gi~v~i~TGd~~~~a~~~a~~lgi~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v 524 (563)
++.|++.+ ++.|+++ +++.++|+.+...+..+.+.+|+......++.+.+.. .....|+--..++
T Consensus 74 ~~~~~~~~-l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~-------------~~Kp~~~~~~~~~ 138 (201)
T 2w43_A 74 KAYEDTKY-LKEISEI-AEVYALSNGSINEVKQHLERNGLLRYFKGIFSAESVK-------------EYKPSPKVYKYFL 138 (201)
T ss_dssp EECGGGGG-HHHHHHH-SEEEEEESSCHHHHHHHHHHTTCGGGCSEEEEGGGGT-------------CCTTCHHHHHHHH
T ss_pred ccCCChHH-HHHHHhC-CeEEEEeCcCHHHHHHHHHHCCcHHhCcEEEehhhcC-------------CCCCCHHHHHHHH
Confidence 46789999 9999999 9999999999999999999999865444444333211 0111233333444
Q ss_pred HHHHHhcCCEEEEEcCCccCHHHHhhCCceEee
Q 044020 525 TQLRNTFGEVVAVTGDGTNDASALHEADIGLAM 557 (563)
Q Consensus 525 ~~l~~~~g~~v~~iGDg~ND~~~l~~a~vgiam 557 (563)
+.+. .+.+++|||+.||+.|.+.||+++++
T Consensus 139 ~~~~---~~~~~~vGD~~~Di~~a~~aG~~~~~ 168 (201)
T 2w43_A 139 DSIG---AKEAFLVSSNAFDVIGAKNAGMRSIF 168 (201)
T ss_dssp HHHT---CSCCEEEESCHHHHHHHHHTTCEEEE
T ss_pred HhcC---CCcEEEEeCCHHHhHHHHHCCCEEEE
Confidence 4444 47899999999999999999999877
|
| >2qlt_A (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, saccharom cerevisiae, structural genomics, PSI-2, protein structure initiative; 1.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=98.00 E-value=6.6e-06 Score=79.47 Aligned_cols=97 Identities=12% Similarity=0.023 Sum_probs=71.8
Q ss_pred CCcchHHHHHHHHhC-CCeEEEEcCCCHHHHHHHHHHcCCCCCCCceeechhhhcCCCCCCCcceeEEEecChhhHHHHH
Q 044020 446 VRPGVKEAVQTCLEA-GITVRMVTGDNINTARAIAKECGILTSDGEAVEGPEFRNMSPADIIPKLQVMARSLPSDKHTLV 524 (563)
Q Consensus 446 ~~~~~~~~I~~l~~~-gi~v~i~TGd~~~~a~~~a~~lgi~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v 524 (563)
+.+++.+.++.|++. |+++.++|+.....+....+.+|+.. ...++.+.+... ....|+--..++
T Consensus 115 ~~~g~~~~L~~l~~~~g~~l~i~T~~~~~~~~~~l~~~~l~~-f~~i~~~~~~~~-------------~kp~~~~~~~~~ 180 (275)
T 2qlt_A 115 EVPGAVKLCNALNALPKEKWAVATSGTRDMAKKWFDILKIKR-PEYFITANDVKQ-------------GKPHPEPYLKGR 180 (275)
T ss_dssp ECTTHHHHHHHHHTSCGGGEEEECSSCHHHHHHHHHHHTCCC-CSSEECGGGCSS-------------CTTSSHHHHHHH
T ss_pred cCcCHHHHHHHHHhccCCeEEEEeCCCHHHHHHHHHHcCCCc-cCEEEEcccCCC-------------CCCChHHHHHHH
Confidence 578999999999999 99999999999999999999999863 233444333110 011233344555
Q ss_pred HHHHH-------hcCCEEEEEcCCccCHHHHhhCCceEee
Q 044020 525 TQLRN-------TFGEVVAVTGDGTNDASALHEADIGLAM 557 (563)
Q Consensus 525 ~~l~~-------~~g~~v~~iGDg~ND~~~l~~a~vgiam 557 (563)
+.+.. . .+.+++|||+.||++|++.||++++|
T Consensus 181 ~~lgi~~~~~~~~-~~~~i~~GDs~nDi~~a~~AG~~~i~ 219 (275)
T 2qlt_A 181 NGLGFPINEQDPS-KSKVVVFEDAPAGIAAGKAAGCKIVG 219 (275)
T ss_dssp HHTTCCCCSSCGG-GSCEEEEESSHHHHHHHHHTTCEEEE
T ss_pred HHcCCCccccCCC-cceEEEEeCCHHHHHHHHHcCCEEEE
Confidence 55554 4 56899999999999999999977666
|
| >2ah5_A COG0546: predicted phosphatases; MCSG, structural genomics, hydrola haloacid dehalogenase-like, PSI; 1.74A {Streptococcus pneumoniae} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=98.00 E-value=6.9e-06 Score=75.75 Aligned_cols=94 Identities=18% Similarity=0.194 Sum_probs=71.1
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCceeechhhhcCCCCCCCcceeEEEecChhhHHHHH
Q 044020 445 PVRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAKECGILTSDGEAVEGPEFRNMSPADIIPKLQVMARSLPSDKHTLV 524 (563)
Q Consensus 445 ~~~~~~~~~I~~l~~~gi~v~i~TGd~~~~a~~~a~~lgi~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v 524 (563)
++.|++.+.++.|++ |+++.++|+.+...+....+.+|+......+ +.++..+..|..+.
T Consensus 84 ~~~~g~~~~l~~L~~-~~~l~i~T~~~~~~~~~~l~~~gl~~~f~~i-------------------~~~~~~~Kp~p~~~ 143 (210)
T 2ah5_A 84 QLFPQIIDLLEELSS-SYPLYITTTKDTSTAQDMAKNLEIHHFFDGI-------------------YGSSPEAPHKADVI 143 (210)
T ss_dssp EECTTHHHHHHHHHT-TSCEEEEEEEEHHHHHHHHHHTTCGGGCSEE-------------------EEECSSCCSHHHHH
T ss_pred CCCCCHHHHHHHHHc-CCeEEEEeCCCHHHHHHHHHhcCchhheeee-------------------ecCCCCCCCChHHH
Confidence 367899999999999 9999999999888889999999986532222 22221123345555
Q ss_pred HHHHHhcC---CEEEEEcCCccCHHHHhhCCc---eEeec
Q 044020 525 TQLRNTFG---EVVAVTGDGTNDASALHEADI---GLAMG 558 (563)
Q Consensus 525 ~~l~~~~g---~~v~~iGDg~ND~~~l~~a~v---giamg 558 (563)
+...+++| +++++|||+.||+.|.+.||+ ++++|
T Consensus 144 ~~~~~~lg~~p~~~~~vgDs~~Di~~a~~aG~~~i~v~~~ 183 (210)
T 2ah5_A 144 HQALQTHQLAPEQAIIIGDTKFDMLGARETGIQKLAITWG 183 (210)
T ss_dssp HHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEESSS
T ss_pred HHHHHHcCCCcccEEEECCCHHHHHHHHHCCCcEEEEcCC
Confidence 55555444 689999999999999999999 77777
|
| >3l5k_A Protein GS1, haloacid dehalogenase-like hydrolase domain- containing protein 1A; HDHD1A, haloacid dehalogenase-like hydrolase domain containing 1A; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.00 E-value=1.7e-06 Score=82.21 Aligned_cols=97 Identities=16% Similarity=0.171 Sum_probs=64.4
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHH-cCCCCCCCceeech--hhhcCCCCCCCcceeEEEecChhhHH
Q 044020 445 PVRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAKE-CGILTSDGEAVEGP--EFRNMSPADIIPKLQVMARSLPSDKH 521 (563)
Q Consensus 445 ~~~~~~~~~I~~l~~~gi~v~i~TGd~~~~a~~~a~~-lgi~~~~~~~~~g~--~~~~~~~~~~~~~~~v~~~~~p~~K~ 521 (563)
.+.+++.++++.|++.|+++.++|+...........+ +|+......++.+. .. .. ...+.
T Consensus 112 ~~~~~~~~~l~~l~~~g~~~~i~sn~~~~~~~~~l~~~~~l~~~f~~~~~~~~~~~-------------~~----~Kp~~ 174 (250)
T 3l5k_A 112 ALMPGAEKLIIHLRKHGIPFALATSSRSASFDMKTSRHKEFFSLFSHIVLGDDPEV-------------QH----GKPDP 174 (250)
T ss_dssp CBCTTHHHHHHHHHHTTCCEEEECSCCHHHHHHHTTTCHHHHTTSSCEECTTCTTC-------------CS----CTTST
T ss_pred CCCCCHHHHHHHHHhCCCcEEEEeCCCHHHHHHHHHhccCHHhheeeEEecchhhc-------------cC----CCCCh
Confidence 4788999999999999999999999987665554332 34433222222222 11 00 11122
Q ss_pred HHHHHHHHhcC-----CEEEEEcCCccCHHHHhhCC---ceEeec
Q 044020 522 TLVTQLRNTFG-----EVVAVTGDGTNDASALHEAD---IGLAMG 558 (563)
Q Consensus 522 ~~v~~l~~~~g-----~~v~~iGDg~ND~~~l~~a~---vgiamg 558 (563)
.+++.+.+.+| +.+++|||+.||+.|.+.|| ++|++|
T Consensus 175 ~~~~~~~~~lgi~~~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~~ 219 (250)
T 3l5k_A 175 DIFLACAKRFSPPPAMEKCLVFEDAPNGVEAALAAGMQVVMVPDG 219 (250)
T ss_dssp HHHHHHHHTSSSCCCGGGEEEEESSHHHHHHHHHTTCEEEECCCT
T ss_pred HHHHHHHHHcCCCCCcceEEEEeCCHHHHHHHHHcCCEEEEEcCC
Confidence 34444444444 78999999999999999999 566667
|
| >3gyg_A NTD biosynthesis operon putative hydrolase NTDB; PF05116, PF08282, MCSG, PSI-2, haloacid dehalogenase-like HY structural genomics; 2.45A {Bacillus subtilis subsp} | Back alignment and structure |
|---|
Probab=97.98 E-value=4.5e-06 Score=81.29 Aligned_cols=107 Identities=21% Similarity=0.261 Sum_probs=72.5
Q ss_pred CCcchHHHHHHHHhC-CCeEEEEcCC---------------------CHHHHHHHHHHcCCCCCCCceeechhhhcCCCC
Q 044020 446 VRPGVKEAVQTCLEA-GITVRMVTGD---------------------NINTARAIAKECGILTSDGEAVEGPEFRNMSPA 503 (563)
Q Consensus 446 ~~~~~~~~I~~l~~~-gi~v~i~TGd---------------------~~~~a~~~a~~lgi~~~~~~~~~g~~~~~~~~~ 503 (563)
..+++.+.++.+++. |+++.+.|.. ....+..+.+..|+..... .... ...
T Consensus 123 ~~~~v~e~l~~l~~~~g~~l~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~--~~~~-~~~---- 195 (289)
T 3gyg_A 123 SKEKVEKLVKQLHENHNILLNPQTQLGKSRYKHNFYYQEQDEINDKKNLLAIEKICEEYGVSVNIN--RCNP-LAG---- 195 (289)
T ss_dssp CHHHHHHHHHHHHHHSSCCCEEGGGTCGGGTTCCEEEECCCHHHHHHHHHHHHHHHHHHTEEEEEE--ECCG-GGT----
T ss_pred CHHHHHHHHHHHHhhhCceeeecccccccceEEEEEEeccccccchHHHHHHHHHHHHcCCCEEEE--Eccc-ccc----
Confidence 567899999999988 9999998876 4556667777777642100 0000 000
Q ss_pred CCCcceeEEEecCh--hhHHHHHHHHHHhcC---CEEEEEcCCccCHHHHhhCCceEeecCCCC
Q 044020 504 DIIPKLQVMARSLP--SDKHTLVTQLRNTFG---EVVAVTGDGTNDASALHEADIGLAMGIAGT 562 (563)
Q Consensus 504 ~~~~~~~v~~~~~p--~~K~~~v~~l~~~~g---~~v~~iGDg~ND~~~l~~a~vgiamg~~~~ 562 (563)
......+.+..| ..|...++.+.+.+| +.++++||+.||++|++.||+|++|| |+.
T Consensus 196 --~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~GDs~~D~~~~~~ag~~~~~~-~~~ 256 (289)
T 3gyg_A 196 --DPEDSYDVDFIPIGTGKNEIVTFMLEKYNLNTERAIAFGDSGNDVRMLQTVGNGYLLK-NAT 256 (289)
T ss_dssp --CCTTEEEEEEEESCCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHTTSSEEEECT-TCC
T ss_pred --CCCCceEEEEEeCCCCHHHHHHHHHHHcCCChhhEEEEcCCHHHHHHHHhCCcEEEEC-Ccc
Confidence 000002233333 468888888777655 57999999999999999999999999 764
|
| >3k1z_A Haloacid dehalogenase-like hydrolase domain-conta protein 3; HDHD3, haloacid dehalogenase-like hydrolase domain containin structural genomics; 1.55A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.96 E-value=5.6e-06 Score=79.36 Aligned_cols=99 Identities=12% Similarity=0.126 Sum_probs=72.8
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCceeechhhhcCCCCCCCcceeEEEecChhhHHHHHH
Q 044020 446 VRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAKECGILTSDGEAVEGPEFRNMSPADIIPKLQVMARSLPSDKHTLVT 525 (563)
Q Consensus 446 ~~~~~~~~I~~l~~~gi~v~i~TGd~~~~a~~~a~~lgi~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~ 525 (563)
+.|++.++++.|++.|+++.++|+... .+..+.+.+|+......++.+.+.. .....|+--..+++
T Consensus 107 ~~~~~~~~l~~l~~~g~~~~i~tn~~~-~~~~~l~~~gl~~~f~~~~~~~~~~-------------~~Kp~~~~~~~~~~ 172 (263)
T 3k1z_A 107 VLDGAEDTLRECRTRGLRLAVISNFDR-RLEGILGGLGLREHFDFVLTSEAAG-------------WPKPDPRIFQEALR 172 (263)
T ss_dssp ECTTHHHHHHHHHHTTCEEEEEESCCT-THHHHHHHTTCGGGCSCEEEHHHHS-------------SCTTSHHHHHHHHH
T ss_pred ECcCHHHHHHHHHhCCCcEEEEeCCcH-HHHHHHHhCCcHHhhhEEEeecccC-------------CCCCCHHHHHHHHH
Confidence 679999999999999999999999766 4688899999865444444433321 11223333445555
Q ss_pred HHHHhcCCEEEEEcCCc-cCHHHHhhCCceEeecC
Q 044020 526 QLRNTFGEVVAVTGDGT-NDASALHEADIGLAMGI 559 (563)
Q Consensus 526 ~l~~~~g~~v~~iGDg~-ND~~~l~~a~vgiamg~ 559 (563)
.+.-. .+.+++|||+. ||+.|.+.||++++|..
T Consensus 173 ~~g~~-~~~~~~vGD~~~~Di~~a~~aG~~~i~~~ 206 (263)
T 3k1z_A 173 LAHME-PVVAAHVGDNYLCDYQGPRAVGMHSFLVV 206 (263)
T ss_dssp HHTCC-GGGEEEEESCHHHHTHHHHTTTCEEEEEC
T ss_pred HcCCC-HHHEEEECCCcHHHHHHHHHCCCEEEEEc
Confidence 55443 47899999997 99999999999999983
|
| >2gmw_A D,D-heptose 1,7-bisphosphate phosphatase; Zn-binding protein, hydrolase; 1.50A {Escherichia coli} SCOP: c.108.1.19 PDB: 3esq_A 3esr_A 3l1u_A 3l1v_A 3l8e_A 3l8f_A 3l8g_A* | Back alignment and structure |
|---|
Probab=97.95 E-value=5.9e-06 Score=76.42 Aligned_cols=106 Identities=15% Similarity=0.092 Sum_probs=67.2
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCC---------------HHHHHHHHHHcCCCCCCCceeechhhhcCCCCCCCcce
Q 044020 445 PVRPGVKEAVQTCLEAGITVRMVTGDN---------------INTARAIAKECGILTSDGEAVEGPEFRNMSPADIIPKL 509 (563)
Q Consensus 445 ~~~~~~~~~I~~l~~~gi~v~i~TGd~---------------~~~a~~~a~~lgi~~~~~~~~~g~~~~~~~~~~~~~~~ 509 (563)
++.|++.++|++|+++|++++++|+.+ ...+....+++|+. ................. ....
T Consensus 50 ~~~pg~~e~L~~L~~~G~~~~ivTn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~-f~~~~~~~~~~~~~~~~--~~~~ 126 (211)
T 2gmw_A 50 EFIDGVIDAMRELKKMGFALVVVTNQSGIARGKFTEAQFETLTEWMDWSLADRDVD-LDGIYYCPHHPQGSVEE--FRQV 126 (211)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEECTHHHHTSSCHHHHHHHHHHHHHHHHHTTCC-CSEEEEECCBTTCSSGG--GBSC
T ss_pred cCCcCHHHHHHHHHHCCCeEEEEECcCCcCCCccCHHHHHHHHHHHHHHHHHcCCc-eEEEEECCcCCCCcccc--cCcc
Confidence 688999999999999999999999999 47788889999986 22112111100000000 0000
Q ss_pred eEEEecChhhHHHHHHHHHHhcCCEEEEEcCCccCHHHHhhCCce
Q 044020 510 QVMARSLPSDKHTLVTQLRNTFGEVVAVTGDGTNDASALHEADIG 554 (563)
Q Consensus 510 ~v~~~~~p~~K~~~v~~l~~~~g~~v~~iGDg~ND~~~l~~a~vg 554 (563)
.......|+--..+++.+.-. .+++++|||+.||+.|.+.||+.
T Consensus 127 ~~~~KP~p~~~~~~~~~lgi~-~~~~~~VGD~~~Di~~a~~aG~~ 170 (211)
T 2gmw_A 127 CDCRKPHPGMLLSARDYLHID-MAASYMVGDKLEDMQAAVAANVG 170 (211)
T ss_dssp CSSSTTSCHHHHHHHHHHTBC-GGGCEEEESSHHHHHHHHHTTCS
T ss_pred CcCCCCCHHHHHHHHHHcCCC-HHHEEEEcCCHHHHHHHHHCCCc
Confidence 001112233333444444433 47899999999999999999963
|
| >2pr7_A Haloacid dehalogenase/epoxide hydrolase family; NP_599989.1, uncharacterized protein, structural genomics; 1.44A {Corynebacterium glutamicum atcc 13032} | Back alignment and structure |
|---|
Probab=97.94 E-value=2.9e-06 Score=72.20 Aligned_cols=96 Identities=8% Similarity=0.031 Sum_probs=67.0
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCceeechhhhcCCCCCCCcceeEEEecChhhHHHHH
Q 044020 445 PVRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAKECGILTSDGEAVEGPEFRNMSPADIIPKLQVMARSLPSDKHTLV 524 (563)
Q Consensus 445 ~~~~~~~~~I~~l~~~gi~v~i~TGd~~~~a~~~a~~lgi~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v 524 (563)
++.|++.+++++|+++|++++++|+.+...+..+.+.+|+......++.+.+.. .....|+--..++
T Consensus 18 ~~~~~~~~~l~~L~~~G~~~~i~S~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~-------------~~Kp~~~~~~~~~ 84 (137)
T 2pr7_A 18 EDQRRWRNLLAAAKKNGVGTVILSNDPGGLGAAPIRELETNGVVDKVLLSGELG-------------VEKPEEAAFQAAA 84 (137)
T ss_dssp HHHHHHHHHHHHHHHTTCEEEEEECSCCGGGGHHHHHHHHTTSSSEEEEHHHHS-------------CCTTSHHHHHHHH
T ss_pred ccCccHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHCChHhhccEEEEeccCC-------------CCCCCHHHHHHHH
Confidence 366789999999999999999999999888888889988765333333322210 0111222223333
Q ss_pred HHHHHhcCCEEEEEcCCccCHHHHhhCCce
Q 044020 525 TQLRNTFGEVVAVTGDGTNDASALHEADIG 554 (563)
Q Consensus 525 ~~l~~~~g~~v~~iGDg~ND~~~l~~a~vg 554 (563)
+.+... .+.+++|||+.+|+.+.+.+|+.
T Consensus 85 ~~~~~~-~~~~~~vgD~~~di~~a~~~G~~ 113 (137)
T 2pr7_A 85 DAIDLP-MRDCVLVDDSILNVRGAVEAGLV 113 (137)
T ss_dssp HHTTCC-GGGEEEEESCHHHHHHHHHHTCE
T ss_pred HHcCCC-cccEEEEcCCHHHHHHHHHCCCE
Confidence 333322 35799999999999999999984
|
| >3f9r_A Phosphomannomutase; trypanosome glycobiology structural genomics, isomerase, structural genomics consortium, SGC; 1.85A {Trypanosoma brucei} SCOP: c.108.1.0 PDB: 2i54_A* 2i55_A* | Back alignment and structure |
|---|
Probab=97.94 E-value=1.4e-05 Score=75.71 Aligned_cols=38 Identities=16% Similarity=0.197 Sum_probs=32.9
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCC
Q 044020 444 DPVRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAKECGI 484 (563)
Q Consensus 444 d~~~~~~~~~I~~l~~~gi~v~i~TGd~~~~a~~~a~~lgi 484 (563)
..+.+.++++|++|+++|++++++|||+... +.+.++.
T Consensus 20 ~~i~~~~~~~l~~l~~~g~~~~iaTGR~~~~---~~~~l~~ 57 (246)
T 3f9r_A 20 LCQTDEMRALIKRARGAGFCVGTVGGSDFAK---QVEQLGR 57 (246)
T ss_dssp SCCCHHHHHHHHHHHHTTCEEEEECSSCHHH---HHHHHCT
T ss_pred CccCHHHHHHHHHHHHCCCEEEEECCCCHHH---HHHHhhh
Confidence 4688999999999999999999999999985 5566664
|
| >3umg_A Haloacid dehalogenase; defluorinase, hydrolase; 2.25A {Rhodococcus jostii} | Back alignment and structure |
|---|
Probab=97.94 E-value=8.2e-06 Score=77.16 Aligned_cols=94 Identities=14% Similarity=0.116 Sum_probs=70.7
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCceeechhhhcCCCCCCCcceeEEEecChhhHHHHH
Q 044020 445 PVRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAKECGILTSDGEAVEGPEFRNMSPADIIPKLQVMARSLPSDKHTLV 524 (563)
Q Consensus 445 ~~~~~~~~~I~~l~~~gi~v~i~TGd~~~~a~~~a~~lgi~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v 524 (563)
++.+++.++++.|++. +++.++|+.+......+.+.+|+. ...++.+.... . ...|..++
T Consensus 116 ~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~~~--f~~~~~~~~~~---------------~--~kp~~~~~ 175 (254)
T 3umg_A 116 TPWPDSVPGLTAIKAE-YIIGPLSNGNTSLLLDMAKNAGIP--WDVIIGSDINR---------------K--YKPDPQAY 175 (254)
T ss_dssp CBCTTHHHHHHHHHHH-SEEEECSSSCHHHHHHHHHHHTCC--CSCCCCHHHHT---------------C--CTTSHHHH
T ss_pred cCCcCHHHHHHHHHhC-CeEEEEeCCCHHHHHHHHHhCCCC--eeEEEEcCcCC---------------C--CCCCHHHH
Confidence 4678999999999997 999999999999999999999985 22222222211 1 11223444
Q ss_pred HHHHHhcC---CEEEEEcCCccCHHHHhhCCceEeec
Q 044020 525 TQLRNTFG---EVVAVTGDGTNDASALHEADIGLAMG 558 (563)
Q Consensus 525 ~~l~~~~g---~~v~~iGDg~ND~~~l~~a~vgiamg 558 (563)
+.+.+++| +.+++|||+.||+.|.+.||++++|.
T Consensus 176 ~~~~~~lgi~~~~~~~iGD~~~Di~~a~~aG~~~~~~ 212 (254)
T 3umg_A 176 LRTAQVLGLHPGEVMLAAAHNGDLEAAHATGLATAFI 212 (254)
T ss_dssp HHHHHHTTCCGGGEEEEESCHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHcCCChHHEEEEeCChHhHHHHHHCCCEEEEE
Confidence 44444444 78999999999999999999999998
|
| >3umc_A Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=97.94 E-value=7.3e-06 Score=77.69 Aligned_cols=94 Identities=10% Similarity=0.015 Sum_probs=69.6
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCceeechhhhcCCCCCCCcceeEEEecChhhHHHHH
Q 044020 445 PVRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAKECGILTSDGEAVEGPEFRNMSPADIIPKLQVMARSLPSDKHTLV 524 (563)
Q Consensus 445 ~~~~~~~~~I~~l~~~gi~v~i~TGd~~~~a~~~a~~lgi~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v 524 (563)
++.+++.++++.|++. ++++++|+.....+..+.+.+|+. ...++.+.... ....|..++
T Consensus 120 ~~~~~~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~~g~~--f~~~~~~~~~~-----------------~~kp~~~~~ 179 (254)
T 3umc_A 120 RPWPDTLAGMHALKAD-YWLAALSNGNTALMLDVARHAGLP--WDMLLCADLFG-----------------HYKPDPQVY 179 (254)
T ss_dssp EECTTHHHHHHHHTTT-SEEEECCSSCHHHHHHHHHHHTCC--CSEECCHHHHT-----------------CCTTSHHHH
T ss_pred CCCccHHHHHHHHHhc-CeEEEEeCCCHHHHHHHHHHcCCC--cceEEeecccc-----------------cCCCCHHHH
Confidence 4578999999999986 999999999999999999999985 22222222210 112233444
Q ss_pred HHHHHhc---CCEEEEEcCCccCHHHHhhCCceEeec
Q 044020 525 TQLRNTF---GEVVAVTGDGTNDASALHEADIGLAMG 558 (563)
Q Consensus 525 ~~l~~~~---g~~v~~iGDg~ND~~~l~~a~vgiamg 558 (563)
+.+.+.+ .+.+++|||+.||+.|.+.||++++|.
T Consensus 180 ~~~~~~lgi~~~~~~~iGD~~~Di~~a~~aG~~~~~~ 216 (254)
T 3umc_A 180 LGACRLLDLPPQEVMLCAAHNYDLKAARALGLKTAFI 216 (254)
T ss_dssp HHHHHHHTCCGGGEEEEESCHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHcCCChHHEEEEcCchHhHHHHHHCCCeEEEE
Confidence 4444333 378999999999999999999999998
|
| >2pke_A Haloacid delahogenase-like family hydrolase; NP_639141.1, ST genomics, joint center for structural genomics, JCSG; 1.81A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=97.92 E-value=1.6e-05 Score=75.30 Aligned_cols=91 Identities=16% Similarity=0.162 Sum_probs=68.3
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCceeechhhhcCCCCCCCcceeEEEec--ChhhHHH
Q 044020 445 PVRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAKECGILTSDGEAVEGPEFRNMSPADIIPKLQVMARS--LPSDKHT 522 (563)
Q Consensus 445 ~~~~~~~~~I~~l~~~gi~v~i~TGd~~~~a~~~a~~lgi~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~--~p~~K~~ 522 (563)
.+.+++.+.++.|+ .|+++.++|+.....+....+.+|+...... +++.. .|+--..
T Consensus 112 ~~~~~~~~~l~~l~-~~~~~~i~t~~~~~~~~~~l~~~~l~~~f~~--------------------i~~~~kp~~~~~~~ 170 (251)
T 2pke_A 112 EVIAGVREAVAAIA-ADYAVVLITKGDLFHQEQKIEQSGLSDLFPR--------------------IEVVSEKDPQTYAR 170 (251)
T ss_dssp CBCTTHHHHHHHHH-TTSEEEEEEESCHHHHHHHHHHHSGGGTCCC--------------------EEEESCCSHHHHHH
T ss_pred CcCccHHHHHHHHH-CCCEEEEEeCCCHHHHHHHHHHcCcHHhCce--------------------eeeeCCCCHHHHHH
Confidence 35799999999999 9999999999999888899999887542111 22222 2333334
Q ss_pred HHHHHHHhcCCEEEEEcCCc-cCHHHHhhCCceEee
Q 044020 523 LVTQLRNTFGEVVAVTGDGT-NDASALHEADIGLAM 557 (563)
Q Consensus 523 ~v~~l~~~~g~~v~~iGDg~-ND~~~l~~a~vgiam 557 (563)
+++.+.-. .+.+++|||+. ||+.|.+.||+++++
T Consensus 171 ~~~~l~~~-~~~~i~iGD~~~~Di~~a~~aG~~~~~ 205 (251)
T 2pke_A 171 VLSEFDLP-AERFVMIGNSLRSDVEPVLAIGGWGIY 205 (251)
T ss_dssp HHHHHTCC-GGGEEEEESCCCCCCHHHHHTTCEEEE
T ss_pred HHHHhCcC-chhEEEECCCchhhHHHHHHCCCEEEE
Confidence 44444433 47899999999 999999999998775
|
| >3ed5_A YFNB; APC60080, bacillus subtilis subsp. subtilis STR. 168, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.72A {Bacillus subtilis} PDB: 3i76_A | Back alignment and structure |
|---|
Probab=97.88 E-value=1.9e-05 Score=73.88 Aligned_cols=94 Identities=11% Similarity=0.113 Sum_probs=69.0
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCceeechhhhcCCCCCCCcceeEEEecChhhHHHHH
Q 044020 445 PVRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAKECGILTSDGEAVEGPEFRNMSPADIIPKLQVMARSLPSDKHTLV 524 (563)
Q Consensus 445 ~~~~~~~~~I~~l~~~gi~v~i~TGd~~~~a~~~a~~lgi~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v 524 (563)
.+.+++.++++.|++. +++.++|+.....+....+.+|+......++.+.+.. ....|...+
T Consensus 103 ~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~-----------------~~kp~~~~~ 164 (238)
T 3ed5_A 103 QLIDGAFDLISNLQQQ-FDLYIVTNGVSHTQYKRLRDSGLFPFFKDIFVSEDTG-----------------FQKPMKEYF 164 (238)
T ss_dssp CBCTTHHHHHHHHHTT-SEEEEEECSCHHHHHHHHHHTTCGGGCSEEEEGGGTT-----------------SCTTCHHHH
T ss_pred CCCccHHHHHHHHHhc-CeEEEEeCCCHHHHHHHHHHcChHhhhheEEEecccC-----------------CCCCChHHH
Confidence 4778999999999999 9999999999999999999999875333333332211 011223444
Q ss_pred HHHHHhcC----CEEEEEcCCc-cCHHHHhhCCceEe
Q 044020 525 TQLRNTFG----EVVAVTGDGT-NDASALHEADIGLA 556 (563)
Q Consensus 525 ~~l~~~~g----~~v~~iGDg~-ND~~~l~~a~vgia 556 (563)
+.+.+.+| +.+++|||+. ||+.|.+.||++.+
T Consensus 165 ~~~~~~~g~~~~~~~i~vGD~~~~Di~~a~~aG~~~i 201 (238)
T 3ed5_A 165 NYVFERIPQFSAEHTLIIGDSLTADIKGGQLAGLDTC 201 (238)
T ss_dssp HHHHHTSTTCCGGGEEEEESCTTTTHHHHHHTTCEEE
T ss_pred HHHHHHcCCCChhHeEEECCCcHHHHHHHHHCCCEEE
Confidence 44444444 6899999998 99999999999543
|
| >2fdr_A Conserved hypothetical protein; SAD, structural genomics, agrobacter tumefaciens, HAD-superfamily hydrolase; 2.00A {Agrobacterium tumefaciens str} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=97.86 E-value=9.7e-06 Score=75.42 Aligned_cols=95 Identities=12% Similarity=0.132 Sum_probs=66.3
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCC-CceeechhhhcCCCCCCCcceeEEEecCh--hhHHH
Q 044020 446 VRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAKECGILTSD-GEAVEGPEFRNMSPADIIPKLQVMARSLP--SDKHT 522 (563)
Q Consensus 446 ~~~~~~~~I~~l~~~gi~v~i~TGd~~~~a~~~a~~lgi~~~~-~~~~~g~~~~~~~~~~~~~~~~v~~~~~p--~~K~~ 522 (563)
+.+++.+.++.++. +++++|+........+.+++|+.... ..++.+.... .. ..|..
T Consensus 88 ~~~~~~~~l~~l~~---~~~i~s~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~-----------------~~~~kpk~~ 147 (229)
T 2fdr_A 88 IIDGVKFALSRLTT---PRCICSNSSSHRLDMMLTKVGLKPYFAPHIYSAKDLG-----------------ADRVKPKPD 147 (229)
T ss_dssp BCTTHHHHHHHCCS---CEEEEESSCHHHHHHHHHHTTCGGGTTTCEEEHHHHC-----------------TTCCTTSSH
T ss_pred cCcCHHHHHHHhCC---CEEEEECCChhHHHHHHHhCChHHhccceEEeccccc-----------------cCCCCcCHH
Confidence 56788888888764 99999999999999999999986533 3333333210 11 22333
Q ss_pred HHHHHHHhc---CCEEEEEcCCccCHHHHhhCCce-EeecCCC
Q 044020 523 LVTQLRNTF---GEVVAVTGDGTNDASALHEADIG-LAMGIAG 561 (563)
Q Consensus 523 ~v~~l~~~~---g~~v~~iGDg~ND~~~l~~a~vg-iamg~~~ 561 (563)
.++.+.+++ .+.+++|||+.||++|++.||++ ++|+ ++
T Consensus 148 ~~~~~~~~l~~~~~~~i~iGD~~~Di~~a~~aG~~~i~~~-~~ 189 (229)
T 2fdr_A 148 IFLHGAAQFGVSPDRVVVVEDSVHGIHGARAAGMRVIGFT-GA 189 (229)
T ss_dssp HHHHHHHHHTCCGGGEEEEESSHHHHHHHHHTTCEEEEEC-CS
T ss_pred HHHHHHHHcCCChhHeEEEcCCHHHHHHHHHCCCEEEEEe-cC
Confidence 444333333 37899999999999999999998 6666 54
|
| >4dcc_A Putative haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 1.65A {Bacteroides thetaiotaomicron} PDB: 4dfd_A 4f71_A 4f72_A | Back alignment and structure |
|---|
Probab=97.82 E-value=1.1e-05 Score=75.37 Aligned_cols=101 Identities=10% Similarity=0.013 Sum_probs=69.4
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHH------HHcCCCCCCCceeechhhhcCCCCCCCcceeEEEecChh
Q 044020 445 PVRPGVKEAVQTCLEAGITVRMVTGDNINTARAIA------KECGILTSDGEAVEGPEFRNMSPADIIPKLQVMARSLPS 518 (563)
Q Consensus 445 ~~~~~~~~~I~~l~~~gi~v~i~TGd~~~~a~~~a------~~lgi~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~p~ 518 (563)
++.|++.++++.|++. +++.++|+.+......+. +.+|+......++...+.. .....|+
T Consensus 112 ~~~~~~~~~l~~l~~~-~~~~i~Sn~~~~~~~~~~~~l~~~~~~~l~~~fd~i~~~~~~~-------------~~KP~~~ 177 (229)
T 4dcc_A 112 DIPTYKLDLLLKLREK-YVVYLLSNTNDIHWKWVCKNAFPYRTFKVEDYFEKTYLSYEMK-------------MAKPEPE 177 (229)
T ss_dssp CCCHHHHHHHHHHTTT-SEEEEEECCCHHHHHHHHHHTSCBTTBCHHHHCSEEEEHHHHT-------------CCTTCHH
T ss_pred hccHHHHHHHHHHHhc-CcEEEEECCChHHHHHHHhhhhhhccCCHHHhCCEEEeecccC-------------CCCCCHH
Confidence 3669999999999999 999999999988888666 4445432222222222110 1112233
Q ss_pred hHHHHHHHHHHhcCCEEEEEcCCccCHHHHhhCCceEeecCCC
Q 044020 519 DKHTLVTQLRNTFGEVVAVTGDGTNDASALHEADIGLAMGIAG 561 (563)
Q Consensus 519 ~K~~~v~~l~~~~g~~v~~iGDg~ND~~~l~~a~vgiamg~~~ 561 (563)
--..+++.+.-. .+.+++|||+.||+.|.+.||++.++. ++
T Consensus 178 ~~~~~~~~~g~~-~~~~~~vGD~~~Di~~a~~aG~~~i~v-~~ 218 (229)
T 4dcc_A 178 IFKAVTEDAGID-PKETFFIDDSEINCKVAQELGISTYTP-KA 218 (229)
T ss_dssp HHHHHHHHHTCC-GGGEEEECSCHHHHHHHHHTTCEEECC-CT
T ss_pred HHHHHHHHcCCC-HHHeEEECCCHHHHHHHHHcCCEEEEE-CC
Confidence 334555555443 478999999999999999999999888 44
|
| >3ib6_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=97.82 E-value=2.3e-05 Score=70.99 Aligned_cols=102 Identities=12% Similarity=0.100 Sum_probs=69.7
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCCH---HHHHHHHHHcCCCCCCCceeechhhhcCCCCCCCcceeEEEecChhhH
Q 044020 444 DPVRPGVKEAVQTCLEAGITVRMVTGDNI---NTARAIAKECGILTSDGEAVEGPEFRNMSPADIIPKLQVMARSLPSDK 520 (563)
Q Consensus 444 d~~~~~~~~~I~~l~~~gi~v~i~TGd~~---~~a~~~a~~lgi~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~p~~K 520 (563)
-++.|++.++++.|+++|++++++|+.+. ..+..+.+.+|+......++...+.... .......|+--
T Consensus 33 ~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~---------~~~~KP~p~~~ 103 (189)
T 3ib6_A 33 VVLRKNAKETLEKVKQLGFKQAILSNTATSDTEVIKRVLTNFGIIDYFDFIYASNSELQP---------GKMEKPDKTIF 103 (189)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHTTCGGGEEEEEECCTTSST---------TCCCTTSHHHH
T ss_pred ceeCcCHHHHHHHHHHCCCEEEEEECCCccchHHHHHHHHhcCchhheEEEEEccccccc---------cCCCCcCHHHH
Confidence 35889999999999999999999998876 8899999999986532222222110000 00011123333
Q ss_pred HHHHHHHHHhcCCEEEEEcCC-ccCHHHHhhCCceE
Q 044020 521 HTLVTQLRNTFGEVVAVTGDG-TNDASALHEADIGL 555 (563)
Q Consensus 521 ~~~v~~l~~~~g~~v~~iGDg-~ND~~~l~~a~vgi 555 (563)
..+++.+... .+.+++|||+ .+|+.+-+.||+..
T Consensus 104 ~~~~~~~~~~-~~~~l~VGD~~~~Di~~A~~aG~~~ 138 (189)
T 3ib6_A 104 DFTLNALQID-KTEAVMVGNTFESDIIGANRAGIHA 138 (189)
T ss_dssp HHHHHHHTCC-GGGEEEEESBTTTTHHHHHHTTCEE
T ss_pred HHHHHHcCCC-cccEEEECCCcHHHHHHHHHCCCeE
Confidence 3444544433 4789999999 69999999999943
|
| >2b0c_A Putative phosphatase; alpha-D-glucose-1-phosphate, structural genomic protein structure initiative, midwest center for structural genomics, MCSG; HET: G1P; 2.00A {Escherichia coli} SCOP: c.108.1.2 | Back alignment and structure |
|---|
Probab=97.80 E-value=1.5e-06 Score=79.74 Aligned_cols=100 Identities=12% Similarity=0.091 Sum_probs=64.2
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHH-cCCCCCCCceeechhhhcCCCCCCCcceeEEEecChhhHHHH
Q 044020 445 PVRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAKE-CGILTSDGEAVEGPEFRNMSPADIIPKLQVMARSLPSDKHTL 523 (563)
Q Consensus 445 ~~~~~~~~~I~~l~~~gi~v~i~TGd~~~~a~~~a~~-lgi~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~p~~K~~~ 523 (563)
++.|++.+.++.|++.|++++++|+.+......+.+. +|+......++.+.+.. .....|+-...+
T Consensus 91 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~~~~~~~l~~~f~~~~~~~~~~-------------~~Kp~~~~~~~~ 157 (206)
T 2b0c_A 91 ALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEIRDAADHIYLSQDLG-------------MRKPEARIYQHV 157 (206)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEECCCCCTTSCCGGGCHHHHHHCSEEEEHHHHT-------------CCTTCHHHHHHH
T ss_pred ccCccHHHHHHHHHHCCCeEEEEECCChHHHHHHHHhccChhhheeeEEEecccC-------------CCCCCHHHHHHH
Confidence 4679999999999999999999999765544333333 33322111222222110 011123333344
Q ss_pred HHHHHHhcCCEEEEEcCCccCHHHHhhCCceEeec
Q 044020 524 VTQLRNTFGEVVAVTGDGTNDASALHEADIGLAMG 558 (563)
Q Consensus 524 v~~l~~~~g~~v~~iGDg~ND~~~l~~a~vgiamg 558 (563)
++.+... .+.+++|||+.||+.|.+.||+..++.
T Consensus 158 ~~~~~~~-~~~~~~vgD~~~Di~~a~~aG~~~~~~ 191 (206)
T 2b0c_A 158 LQAEGFS-PSDTVFFDDNADNIEGANQLGITSILV 191 (206)
T ss_dssp HHHHTCC-GGGEEEEESCHHHHHHHHTTTCEEEEC
T ss_pred HHHcCCC-HHHeEEeCCCHHHHHHHHHcCCeEEEe
Confidence 5554433 478999999999999999999988876
|
| >3smv_A S-(-)-azetidine-2-carboxylate hydrolase; haloacid dehalogenase superfamily, L-azetidine-2- carboxylate; HET: GOL; 1.38A {Pseudomonas} | Back alignment and structure |
|---|
Probab=97.78 E-value=2.2e-05 Score=73.37 Aligned_cols=97 Identities=13% Similarity=0.127 Sum_probs=67.9
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCceeechhhhcCCCCCCCcceeEEEecChhhHHHHH
Q 044020 445 PVRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAKECGILTSDGEAVEGPEFRNMSPADIIPKLQVMARSLPSDKHTLV 524 (563)
Q Consensus 445 ~~~~~~~~~I~~l~~~gi~v~i~TGd~~~~a~~~a~~lgi~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v 524 (563)
++.+++.++++.|++ |+++.++|+.+........+.++ .....++.+.++. .....|.-...++
T Consensus 99 ~~~~~~~~~l~~l~~-~~~~~i~tn~~~~~~~~~l~~l~--~~fd~i~~~~~~~-------------~~KP~~~~~~~~l 162 (240)
T 3smv_A 99 PAFPDTVEALQYLKK-HYKLVILSNIDRNEFKLSNAKLG--VEFDHIITAQDVG-------------SYKPNPNNFTYMI 162 (240)
T ss_dssp CBCTTHHHHHHHHHH-HSEEEEEESSCHHHHHHHHTTTC--SCCSEEEEHHHHT-------------SCTTSHHHHHHHH
T ss_pred CCCCcHHHHHHHHHh-CCeEEEEeCCChhHHHHHHHhcC--CccCEEEEccccC-------------CCCCCHHHHHHHH
Confidence 578999999999999 89999999999888877777644 2223333333221 1122333333453
Q ss_pred HHH---HHhcCCEEEEEcCCc-cCHHHHhhCCceEeec
Q 044020 525 TQL---RNTFGEVVAVTGDGT-NDASALHEADIGLAMG 558 (563)
Q Consensus 525 ~~l---~~~~g~~v~~iGDg~-ND~~~l~~a~vgiamg 558 (563)
+.+ .-. .+.+++|||+. ||+.|.+.||++++|.
T Consensus 163 ~~~~~lgi~-~~~~~~vGD~~~~Di~~a~~aG~~~~~~ 199 (240)
T 3smv_A 163 DALAKAGIE-KKDILHTAESLYHDHIPANDAGLVSAWI 199 (240)
T ss_dssp HHHHHTTCC-GGGEEEEESCTTTTHHHHHHHTCEEEEE
T ss_pred HHHHhcCCC-chhEEEECCCchhhhHHHHHcCCeEEEE
Confidence 332 222 37899999996 9999999999999996
|
| >3kbb_A Phosphorylated carbohydrates phosphatase TM_1254; hydrolase, arbohydrate metabolism, COBA magnesium, manganese, metal-binding, nickel; HET: MSE GOL; 1.74A {Thermotoga maritima MSB8} | Back alignment and structure |
|---|
Probab=97.75 E-value=3.5e-05 Score=71.11 Aligned_cols=95 Identities=20% Similarity=0.185 Sum_probs=74.4
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCceeechhhhcCCCCCCCcceeEEEecChhhHHHHHH
Q 044020 446 VRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAKECGILTSDGEAVEGPEFRNMSPADIIPKLQVMARSLPSDKHTLVT 525 (563)
Q Consensus 446 ~~~~~~~~I~~l~~~gi~v~i~TGd~~~~a~~~a~~lgi~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~ 525 (563)
+.|++.++++.|++.|+++.++|+.+...+....+.+|+......++...+.. .....|+--..+++
T Consensus 85 ~~pg~~~~l~~L~~~g~~~~i~tn~~~~~~~~~l~~~~l~~~fd~~~~~~~~~-------------~~KP~p~~~~~a~~ 151 (216)
T 3kbb_A 85 ENPGVREALEFVKSKRIKLALATSTPQREALERLRRLDLEKYFDVMVFGDQVK-------------NGKPDPEIYLLVLE 151 (216)
T ss_dssp BCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGCSEEECGGGSS-------------SCTTSTHHHHHHHH
T ss_pred cCccHHHHHHHHHHcCCCcccccCCcHHHHHHHHHhcCCCccccccccccccC-------------CCcccHHHHHHHHH
Confidence 57899999999999999999999999999999999999986554444444321 12234444455666
Q ss_pred HHHHhcCCEEEEEcCCccCHHHHhhCCce
Q 044020 526 QLRNTFGEVVAVTGDGTNDASALHEADIG 554 (563)
Q Consensus 526 ~l~~~~g~~v~~iGDg~ND~~~l~~a~vg 554 (563)
.+.-. .+++++|||+.+|+.+-+.||+.
T Consensus 152 ~lg~~-p~e~l~VgDs~~Di~aA~~aG~~ 179 (216)
T 3kbb_A 152 RLNVV-PEKVVVFEDSKSGVEAAKSAGIE 179 (216)
T ss_dssp HHTCC-GGGEEEEECSHHHHHHHHHTTCC
T ss_pred hhCCC-ccceEEEecCHHHHHHHHHcCCc
Confidence 66554 57899999999999999999985
|
| >3pdw_A Uncharacterized hydrolase YUTF; structural genomics, PSI2, NYSGXRC, protein structure initia YORK SGX research center for structural genomics; 1.60A {Bacillus subtilis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=97.72 E-value=1.7e-05 Score=76.08 Aligned_cols=44 Identities=16% Similarity=0.070 Sum_probs=38.2
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcC---CCHHHHHHHHHHcCCCCC
Q 044020 444 DPVRPGVKEAVQTCLEAGITVRMVTG---DNINTARAIAKECGILTS 487 (563)
Q Consensus 444 d~~~~~~~~~I~~l~~~gi~v~i~TG---d~~~~a~~~a~~lgi~~~ 487 (563)
+.+.++++++|++|+++|++++++|| |+........+++|+...
T Consensus 21 ~~~~~~~~~ai~~l~~~Gi~v~laTgrs~r~~~~~~~~l~~lg~~~~ 67 (266)
T 3pdw_A 21 TEKIEEACEFVRTLKDRGVPYLFVTNNSSRTPKQVADKLVSFDIPAT 67 (266)
T ss_dssp HHHHHHHHHHHHHHHHTTCCEEEEESCCSSCHHHHHHHHHHTTCCCC
T ss_pred CEeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCC
Confidence 44567899999999999999999988 788888889999998643
|
| >2o2x_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; 1.50A {Mesorhizobium loti} SCOP: c.108.1.19 | Back alignment and structure |
|---|
Probab=97.69 E-value=3.9e-05 Score=71.18 Aligned_cols=108 Identities=19% Similarity=0.111 Sum_probs=65.7
Q ss_pred cCCCCcchHHHHHHHHhCCCeEEEEcCCCH---------------HHHHHHHHHcCCCCCCCceeechhh-hcCCCCCCC
Q 044020 443 KDPVRPGVKEAVQTCLEAGITVRMVTGDNI---------------NTARAIAKECGILTSDGEAVEGPEF-RNMSPADII 506 (563)
Q Consensus 443 ~d~~~~~~~~~I~~l~~~gi~v~i~TGd~~---------------~~a~~~a~~lgi~~~~~~~~~g~~~-~~~~~~~~~ 506 (563)
..++.|++.++|++|+++|++++++|+.+. ..+....+++|+.- .......... ..+. . .
T Consensus 54 ~~~~~~g~~e~L~~L~~~G~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~-~~~~~~~~~~~g~~~-~--~ 129 (218)
T 2o2x_A 54 EIVLRPQMLPAIATANRAGIPVVVVTNQSGIARGYFGWSAFAAVNGRVLELLREEGVFV-DMVLACAYHEAGVGP-L--A 129 (218)
T ss_dssp GCCBCGGGHHHHHHHHHHTCCEEEEEECHHHHTTSCCHHHHHHHHHHHHHHHHHTTCCC-SEEEEECCCTTCCST-T--C
T ss_pred cCeECcCHHHHHHHHHHCCCEEEEEcCcCCCCcccccHHHHHHHHHHHHHHHHHcCCce-eeEEEeecCCCCcee-e--c
Confidence 356889999999999999999999999987 67888999999741 1100000000 0000 0 0
Q ss_pred cceeEEEecChhhHHHHHHHHHHhcCCEEEEEcCCccCHHHHhhCCceE
Q 044020 507 PKLQVMARSLPSDKHTLVTQLRNTFGEVVAVTGDGTNDASALHEADIGL 555 (563)
Q Consensus 507 ~~~~v~~~~~p~~K~~~v~~l~~~~g~~v~~iGDg~ND~~~l~~a~vgi 555 (563)
..........|.--..+++.+.-. .++++||||+.||+.|.+.||+..
T Consensus 130 ~~~~~~~KP~~~~~~~~~~~~~i~-~~~~~~VGD~~~Di~~a~~aG~~~ 177 (218)
T 2o2x_A 130 IPDHPMRKPNPGMLVEAGKRLALD-LQRSLIVGDKLADMQAGKRAGLAQ 177 (218)
T ss_dssp CSSCTTSTTSCHHHHHHHHHHTCC-GGGCEEEESSHHHHHHHHHTTCSE
T ss_pred ccCCccCCCCHHHHHHHHHHcCCC-HHHEEEEeCCHHHHHHHHHCCCCE
Confidence 000000011122222333333322 368999999999999999999854
|
| >3qgm_A P-nitrophenyl phosphatase (PHO2); structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 2.00A {Archaeoglobus fulgidus} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=97.64 E-value=1.9e-05 Score=75.82 Aligned_cols=46 Identities=15% Similarity=0.096 Sum_probs=39.5
Q ss_pred ccCCCCcchHHHHHHHHhCCCeEEEEcC---CCHHHHHHHHHHcCCCCC
Q 044020 442 IKDPVRPGVKEAVQTCLEAGITVRMVTG---DNINTARAIAKECGILTS 487 (563)
Q Consensus 442 ~~d~~~~~~~~~I~~l~~~gi~v~i~TG---d~~~~a~~~a~~lgi~~~ 487 (563)
-.+.+-++++++|++|+++|++++++|| |+........+.+|+...
T Consensus 21 ~~~~~~~~~~~ai~~l~~~Gi~v~l~Tgr~~r~~~~~~~~l~~lg~~~~ 69 (268)
T 3qgm_A 21 KSVTPIPEGVEGVKKLKELGKKIIFVSNNSTRSRRILLERLRSFGLEVG 69 (268)
T ss_dssp ETTEECHHHHHHHHHHHHTTCEEEEEECCSSSCHHHHHHHHHHTTCCCC
T ss_pred CCCEeCcCHHHHHHHHHHcCCeEEEEeCcCCCCHHHHHHHHHHCCCCCC
Confidence 3555678999999999999999999999 788888888899998643
|
| >2gfh_A Haloacid dehalogenase-like hydrolase domain conta; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.90A {Mus musculus} SCOP: c.108.1.6 PDB: 2w4m_A | Back alignment and structure |
|---|
Probab=97.62 E-value=9.9e-05 Score=70.49 Aligned_cols=99 Identities=16% Similarity=0.139 Sum_probs=72.5
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCceeechhhhcCCCCCCCcceeEEEecChhhHHHHH
Q 044020 445 PVRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAKECGILTSDGEAVEGPEFRNMSPADIIPKLQVMARSLPSDKHTLV 524 (563)
Q Consensus 445 ~~~~~~~~~I~~l~~~gi~v~i~TGd~~~~a~~~a~~lgi~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v 524 (563)
++.|++.++++.|++ ++++.++|+.+...+....+.+|+......++.+.+.. .....|+--..++
T Consensus 121 ~~~~g~~~~L~~L~~-~~~l~i~Tn~~~~~~~~~l~~~gl~~~f~~i~~~~~~~-------------~~KP~p~~~~~~~ 186 (260)
T 2gfh_A 121 ILADDVKAMLTELRK-EVRLLLLTNGDRQTQREKIEACACQSYFDAIVIGGEQK-------------EEKPAPSIFYHCC 186 (260)
T ss_dssp CCCHHHHHHHHHHHT-TSEEEEEECSCHHHHHHHHHHHTCGGGCSEEEEGGGSS-------------SCTTCHHHHHHHH
T ss_pred CCCcCHHHHHHHHHc-CCcEEEEECcChHHHHHHHHhcCHHhhhheEEecCCCC-------------CCCCCHHHHHHHH
Confidence 477999999999998 59999999999999999999999876444444433311 1122233334445
Q ss_pred HHHHHhcCCEEEEEcCC-ccCHHHHhhCCc--eEeec
Q 044020 525 TQLRNTFGEVVAVTGDG-TNDASALHEADI--GLAMG 558 (563)
Q Consensus 525 ~~l~~~~g~~v~~iGDg-~ND~~~l~~a~v--giamg 558 (563)
+.+.-. .+.+++|||+ .||+.+-+.||+ .|.+.
T Consensus 187 ~~~~~~-~~~~~~vGDs~~~Di~~A~~aG~~~~i~v~ 222 (260)
T 2gfh_A 187 DLLGVQ-PGDCVMVGDTLETDIQGGLNAGLKATVWIN 222 (260)
T ss_dssp HHHTCC-GGGEEEEESCTTTHHHHHHHTTCSEEEEEC
T ss_pred HHcCCC-hhhEEEECCCchhhHHHHHHCCCceEEEEc
Confidence 555433 4789999995 999999999999 67775
|
| >3ocu_A Lipoprotein E; hydrolase, outer membrane; HET: NMN; 1.35A {Haemophilus influenzae} PDB: 3ocv_A* 3ocw_A* 3ocx_A* 3ocz_A* 3ocy_A* 3sf0_A* 2hlk_A 2hll_A 3et4_A 3et5_A | Back alignment and structure |
|---|
Probab=97.44 E-value=7.6e-05 Score=70.46 Aligned_cols=84 Identities=19% Similarity=0.147 Sum_probs=65.0
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCCH----HHHHHHHHHcCCCCCCCceeechhhhcCCCCCCCcceeEEEecChhh
Q 044020 444 DPVRPGVKEAVQTCLEAGITVRMVTGDNI----NTARAIAKECGILTSDGEAVEGPEFRNMSPADIIPKLQVMARSLPSD 519 (563)
Q Consensus 444 d~~~~~~~~~I~~l~~~gi~v~i~TGd~~----~~a~~~a~~lgi~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~p~~ 519 (563)
.++.|++.+.++.|+++|++++++|||+. ..+....+++||..... ..++.+.....
T Consensus 100 ~~~~pG~~ell~~L~~~G~ki~ivTgR~~~~~r~~T~~~L~~lGi~~~~~-------------------~~Lilr~~~~~ 160 (262)
T 3ocu_A 100 SRAVPGAVEFNNYVNSHNGKVFYVTNRKDSTEKSGTIDDMKRLGFNGVEE-------------------SAFYLKKDKSA 160 (262)
T ss_dssp CEECTTHHHHHHHHHHTTEEEEEEEEEETTTTHHHHHHHHHHHTCSCCSG-------------------GGEEEESSCSC
T ss_pred CCCCccHHHHHHHHHHCCCeEEEEeCCCccchHHHHHHHHHHcCcCcccc-------------------cceeccCCCCC
Confidence 45889999999999999999999999965 58888899999974110 01444433456
Q ss_pred HHHHHHHHHHhcC-CEEEEEcCCccCHHH
Q 044020 520 KHTLVTQLRNTFG-EVVAVTGDGTNDASA 547 (563)
Q Consensus 520 K~~~v~~l~~~~g-~~v~~iGDg~ND~~~ 547 (563)
|....+.+.+. | ..|++|||..+|+++
T Consensus 161 K~~~r~~l~~~-Gy~iv~~vGD~~~Dl~~ 188 (262)
T 3ocu_A 161 KAARFAEIEKQ-GYEIVLYVGDNLDDFGN 188 (262)
T ss_dssp CHHHHHHHHHT-TEEEEEEEESSGGGGCS
T ss_pred hHHHHHHHHhc-CCCEEEEECCChHHhcc
Confidence 77777777765 4 579999999999986
|
| >3pct_A Class C acid phosphatase; hydrolase, outer membrane; 1.85A {Pasteurella multocida} | Back alignment and structure |
|---|
Probab=97.42 E-value=0.00011 Score=69.34 Aligned_cols=85 Identities=19% Similarity=0.163 Sum_probs=65.8
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCCH----HHHHHHHHHcCCCCCCCceeechhhhcCCCCCCCcceeEEEecChhh
Q 044020 444 DPVRPGVKEAVQTCLEAGITVRMVTGDNI----NTARAIAKECGILTSDGEAVEGPEFRNMSPADIIPKLQVMARSLPSD 519 (563)
Q Consensus 444 d~~~~~~~~~I~~l~~~gi~v~i~TGd~~----~~a~~~a~~lgi~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~p~~ 519 (563)
.++.|++.+.++.|+++|++++++|||+. ..+....+++||..... ..++.+.....
T Consensus 100 ~~~~pg~~ell~~L~~~G~~i~ivTgR~~~~~r~~T~~~L~~lGi~~~~~-------------------~~Lilr~~~~~ 160 (260)
T 3pct_A 100 SAAIPGAVEFSNYVNANGGTMFFVSNRRDDVEKAGTVDDMKRLGFTGVND-------------------KTLLLKKDKSN 160 (260)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEEEEEETTTSHHHHHHHHHHHTCCCCST-------------------TTEEEESSCSS
T ss_pred CCCCccHHHHHHHHHHCCCeEEEEeCCCccccHHHHHHHHHHcCcCcccc-------------------ceeEecCCCCC
Confidence 46889999999999999999999999965 48888899999974210 01343433467
Q ss_pred HHHHHHHHHHhcCCEEEEEcCCccCHHH
Q 044020 520 KHTLVTQLRNTFGEVVAVTGDGTNDASA 547 (563)
Q Consensus 520 K~~~v~~l~~~~g~~v~~iGDg~ND~~~ 547 (563)
|....+.+.+.--..++++||..+|+++
T Consensus 161 K~~~r~~L~~~gy~iv~~iGD~~~Dl~~ 188 (260)
T 3pct_A 161 KSVRFKQVEDMGYDIVLFVGDNLNDFGD 188 (260)
T ss_dssp SHHHHHHHHTTTCEEEEEEESSGGGGCG
T ss_pred hHHHHHHHHhcCCCEEEEECCChHHcCc
Confidence 8888888877413579999999999987
|
| >1vjr_A 4-nitrophenylphosphatase; TM1742, structural genomics, JCSG, protein structure initiative, joint center for structural G hydrolase; 2.40A {Thermotoga maritima} SCOP: c.108.1.14 PDB: 1pw5_A* | Back alignment and structure |
|---|
Probab=97.41 E-value=0.00014 Score=69.72 Aligned_cols=43 Identities=19% Similarity=0.158 Sum_probs=39.3
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEc---CCCHHHHHHHHHHcCCCC
Q 044020 444 DPVRPGVKEAVQTCLEAGITVRMVT---GDNINTARAIAKECGILT 486 (563)
Q Consensus 444 d~~~~~~~~~I~~l~~~gi~v~i~T---Gd~~~~a~~~a~~lgi~~ 486 (563)
.++.+++.++|++|+++|++++++| ||+........+++|+..
T Consensus 32 ~~~~~~~~~~l~~l~~~G~~~~~aTn~~gr~~~~~~~~~~~lg~~~ 77 (271)
T 1vjr_A 32 DSLLPGSLEFLETLKEKNKRFVFFTNNSSLGAQDYVRKLRNMGVDV 77 (271)
T ss_dssp TEECTTHHHHHHHHHHTTCEEEEEESCTTSCHHHHHHHHHHTTCCC
T ss_pred CEECcCHHHHHHHHHHcCCeEEEEECCCCCCHHHHHHHHHHcCCCC
Confidence 6678999999999999999999999 999999999999999864
|
| >3vay_A HAD-superfamily hydrolase; rossmann fold, haloacid dehalogenase; 1.98A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=97.39 E-value=0.00011 Score=68.24 Aligned_cols=93 Identities=13% Similarity=0.221 Sum_probs=60.7
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCceeechhhhcCCCCCCCcceeEEEecChhhHHHHH
Q 044020 445 PVRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAKECGILTSDGEAVEGPEFRNMSPADIIPKLQVMARSLPSDKHTLV 524 (563)
Q Consensus 445 ~~~~~~~~~I~~l~~~gi~v~i~TGd~~~~a~~~a~~lgi~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v 524 (563)
++.+++.++++.|++. +++.++|+.+.. .+.+|+......++.+.... .....|+--..++
T Consensus 105 ~~~~~~~~~l~~l~~~-~~~~i~t~~~~~-----l~~~~l~~~f~~~~~~~~~~-------------~~kp~~~~~~~~~ 165 (230)
T 3vay_A 105 QIFPEVQPTLEILAKT-FTLGVITNGNAD-----VRRLGLADYFAFALCAEDLG-------------IGKPDPAPFLEAL 165 (230)
T ss_dssp CBCTTHHHHHHHHHTT-SEEEEEESSCCC-----GGGSTTGGGCSEEEEHHHHT-------------CCTTSHHHHHHHH
T ss_pred ccCcCHHHHHHHHHhC-CeEEEEECCchh-----hhhcCcHHHeeeeEEccccC-------------CCCcCHHHHHHHH
Confidence 3678999999999999 999999987654 45566554222222222110 0011222223344
Q ss_pred HHHHHhcCCEEEEEcCCc-cCHHHHhhCCceEee
Q 044020 525 TQLRNTFGEVVAVTGDGT-NDASALHEADIGLAM 557 (563)
Q Consensus 525 ~~l~~~~g~~v~~iGDg~-ND~~~l~~a~vgiam 557 (563)
+.+.-. .+.+++|||+. ||+.|.+.||++.++
T Consensus 166 ~~~~~~-~~~~~~vGD~~~~Di~~a~~aG~~~~~ 198 (230)
T 3vay_A 166 RRAKVD-ASAAVHVGDHPSDDIAGAQQAGMRAIW 198 (230)
T ss_dssp HHHTCC-GGGEEEEESCTTTTHHHHHHTTCEEEE
T ss_pred HHhCCC-chheEEEeCChHHHHHHHHHCCCEEEE
Confidence 444333 47899999997 999999999998877
|
| >2x4d_A HLHPP, phospholysine phosphohistidine inorganic pyrophos phosphatase; hydrolase; 1.92A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.37 E-value=0.00049 Score=65.50 Aligned_cols=41 Identities=20% Similarity=0.155 Sum_probs=37.3
Q ss_pred CCcchHHHHHHHHhCCCeEEEEc---CCCHHHHHHHHHHcCCCC
Q 044020 446 VRPGVKEAVQTCLEAGITVRMVT---GDNINTARAIAKECGILT 486 (563)
Q Consensus 446 ~~~~~~~~I~~l~~~gi~v~i~T---Gd~~~~a~~~a~~lgi~~ 486 (563)
+.+.+.++++.+++.|++++++| ||+........+++|+..
T Consensus 33 ~~~~~~~a~~~l~~~G~~~~~~t~~~gr~~~~~~~~l~~~g~~~ 76 (271)
T 2x4d_A 33 AIAGSVEAVARLKRSRLKVRFCTNESAASRAELVGQLQRLGFDI 76 (271)
T ss_dssp ECTTHHHHHHHHHHSSSEEEEECCCCSSCHHHHHHHHHHTTCCC
T ss_pred cCcCHHHHHHHHHHCCCcEEEEECCCCCCHHHHHHHHHHCCCCC
Confidence 66889999999999999999999 999999999999988854
|
| >1qyi_A ZR25, hypothetical protein; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG; 2.50A {Staphylococcus aureus subsp} SCOP: c.108.1.13 | Back alignment and structure |
|---|
Probab=97.36 E-value=8.7e-05 Score=74.69 Aligned_cols=107 Identities=13% Similarity=0.112 Sum_probs=71.9
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCC--ceeechhhhcCCCCCCCcceeEEEecChhhHHH
Q 044020 445 PVRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAKECGILTSDG--EAVEGPEFRNMSPADIIPKLQVMARSLPSDKHT 522 (563)
Q Consensus 445 ~~~~~~~~~I~~l~~~gi~v~i~TGd~~~~a~~~a~~lgi~~~~~--~~~~g~~~~~~~~~~~~~~~~v~~~~~p~~K~~ 522 (563)
++.|++.++++.|+++|+++.++|+.+...+....+.+|+..... .++.+.+...... ..+.........|+--..
T Consensus 215 ~l~pGv~elL~~Lk~~Gi~laIvTn~~~~~~~~~L~~lgL~~~Fd~~~Ivs~ddv~~~~~--~~~~~kp~~KP~P~~~~~ 292 (384)
T 1qyi_A 215 RPVDEVKVLLNDLKGAGFELGIATGRPYTETVVPFENLGLLPYFEADFIATASDVLEAEN--MYPQARPLGKPNPFSYIA 292 (384)
T ss_dssp SCHHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCGGGSCGGGEECHHHHHHHHH--HSTTSCCCCTTSTHHHHH
T ss_pred CcCcCHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHcCChHhcCCCEEEeccccccccc--ccccccCCCCCCHHHHHH
Confidence 578899999999999999999999999999999999999976544 5555554321000 000000011222333223
Q ss_pred HHHHHH--------------HhcCCEEEEEcCCccCHHHHhhCCce
Q 044020 523 LVTQLR--------------NTFGEVVAVTGDGTNDASALHEADIG 554 (563)
Q Consensus 523 ~v~~l~--------------~~~g~~v~~iGDg~ND~~~l~~a~vg 554 (563)
+++.+. .. .+.+++|||+.+|+.+-+.||+.
T Consensus 293 a~~~lg~~~~~~~~~~~~~~v~-p~e~l~VGDs~~Di~aAk~AG~~ 337 (384)
T 1qyi_A 293 ALYGNNRDKYESYINKQDNIVN-KDDVFIVGDSLADLLSAQKIGAT 337 (384)
T ss_dssp HHHCCCGGGHHHHHHCCTTCSC-TTTEEEEESSHHHHHHHHHHTCE
T ss_pred HHHHcCCccccccccccccCCC-CcCeEEEcCCHHHHHHHHHcCCE
Confidence 333322 11 47899999999999999999985
|
| >4gib_A Beta-phosphoglucomutase; rossmann fold, HAD-like, structural genomics, center for structural genomics of infectious DISE csgid, isomerase; 2.27A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=97.35 E-value=0.00022 Score=67.55 Aligned_cols=98 Identities=12% Similarity=0.182 Sum_probs=74.7
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCceeechhhhcCCCCCCCcceeEEEecChhhHHHHH
Q 044020 445 PVRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAKECGILTSDGEAVEGPEFRNMSPADIIPKLQVMARSLPSDKHTLV 524 (563)
Q Consensus 445 ~~~~~~~~~I~~l~~~gi~v~i~TGd~~~~a~~~a~~lgi~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v 524 (563)
++.|++.+.++.|++.|+++.+.|+.. .+....+.+|+......++.+.+.. .....|+--..++
T Consensus 116 ~~~p~~~~ll~~Lk~~g~~i~i~~~~~--~~~~~L~~~gl~~~Fd~i~~~~~~~-------------~~KP~p~~~~~a~ 180 (250)
T 4gib_A 116 DILPGIESLLIDVKSNNIKIGLSSASK--NAINVLNHLGISDKFDFIADAGKCK-------------NNKPHPEIFLMSA 180 (250)
T ss_dssp GSCTTHHHHHHHHHHTTCEEEECCSCT--THHHHHHHHTCGGGCSEECCGGGCC-------------SCTTSSHHHHHHH
T ss_pred ccchhHHHHHHHHHhcccccccccccc--hhhhHhhhcccccccceeecccccC-------------CCCCcHHHHHHHH
Confidence 467999999999999999999988764 3567789999987666665555431 1234455556667
Q ss_pred HHHHHhcCCEEEEEcCCccCHHHHhhCCc-eEeec
Q 044020 525 TQLRNTFGEVVAVTGDGTNDASALHEADI-GLAMG 558 (563)
Q Consensus 525 ~~l~~~~g~~v~~iGDg~ND~~~l~~a~v-giamg 558 (563)
+.+.-. .+++++|||+.+|+.+-+.||+ .|+++
T Consensus 181 ~~lg~~-p~e~l~VGDs~~Di~aA~~aG~~~i~v~ 214 (250)
T 4gib_A 181 KGLNVN-PQNCIGIEDASAGIDAINSANMFSVGVG 214 (250)
T ss_dssp HHHTCC-GGGEEEEESSHHHHHHHHHTTCEEEEES
T ss_pred HHhCCC-hHHeEEECCCHHHHHHHHHcCCEEEEEC
Confidence 766655 6789999999999999999998 56665
|
| >4g9b_A Beta-PGM, beta-phosphoglucomutase; HAD, putative phosphoglucomutase, enzyme function initiative structural genomics, isomerase; 1.70A {Escherichia coli} | Back alignment and structure |
|---|
Probab=97.32 E-value=0.00019 Score=67.64 Aligned_cols=98 Identities=12% Similarity=0.138 Sum_probs=74.0
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCceeechhhhcCCCCCCCcceeEEEecChhhHHHHH
Q 044020 445 PVRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAKECGILTSDGEAVEGPEFRNMSPADIIPKLQVMARSLPSDKHTLV 524 (563)
Q Consensus 445 ~~~~~~~~~I~~l~~~gi~v~i~TGd~~~~a~~~a~~lgi~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v 524 (563)
++.|++.+.++.|+++|+++.++|+... +..+.+.+|+......++.+.+.. .....|+--..++
T Consensus 95 ~~~pg~~~ll~~L~~~g~~i~i~t~~~~--~~~~l~~~gl~~~fd~i~~~~~~~-------------~~KP~p~~~~~a~ 159 (243)
T 4g9b_A 95 AVLPGIRSLLADLRAQQISVGLASVSLN--APTILAALELREFFTFCADASQLK-------------NSKPDPEIFLAAC 159 (243)
T ss_dssp GBCTTHHHHHHHHHHTTCEEEECCCCTT--HHHHHHHTTCGGGCSEECCGGGCS-------------SCTTSTHHHHHHH
T ss_pred cccccHHHHHHhhhcccccceecccccc--hhhhhhhhhhcccccccccccccc-------------CCCCcHHHHHHHH
Confidence 4679999999999999999999998754 466788999887655555555432 1233455555666
Q ss_pred HHHHHhcCCEEEEEcCCccCHHHHhhCCc-eEeec
Q 044020 525 TQLRNTFGEVVAVTGDGTNDASALHEADI-GLAMG 558 (563)
Q Consensus 525 ~~l~~~~g~~v~~iGDg~ND~~~l~~a~v-giamg 558 (563)
+.+.-. .+++++|||+.+|+.+-+.||+ .|+++
T Consensus 160 ~~lg~~-p~e~l~VgDs~~di~aA~~aG~~~I~V~ 193 (243)
T 4g9b_A 160 AGLGVP-PQACIGIEDAQAGIDAINASGMRSVGIG 193 (243)
T ss_dssp HHHTSC-GGGEEEEESSHHHHHHHHHHTCEEEEES
T ss_pred HHcCCC-hHHEEEEcCCHHHHHHHHHcCCEEEEEC
Confidence 666655 6899999999999999999998 55555
|
| >1ltq_A Polynucleotide kinase; phosphatase, alpha/beta, P-loop, transferase; HET: ADP; 2.33A {Enterobacteria phage T4} SCOP: c.108.1.9 c.37.1.1 PDB: 1rc8_A* 1rpz_A* 1rrc_A* 2ia5_A | Back alignment and structure |
|---|
Probab=97.29 E-value=0.00021 Score=69.85 Aligned_cols=101 Identities=13% Similarity=0.025 Sum_probs=69.9
Q ss_pred cccCCCCcchHHHHHHHHhCCCeEEEEcCCCHHH---HHHHHHH--------cCCCCCCCceeechhhhcCCCCCCCcce
Q 044020 441 GIKDPVRPGVKEAVQTCLEAGITVRMVTGDNINT---ARAIAKE--------CGILTSDGEAVEGPEFRNMSPADIIPKL 509 (563)
Q Consensus 441 ~~~d~~~~~~~~~I~~l~~~gi~v~i~TGd~~~~---a~~~a~~--------lgi~~~~~~~~~g~~~~~~~~~~~~~~~ 509 (563)
..+.++.|++.++++.|+++|+++.++||++... +....+. +|+. ...++.+.+.
T Consensus 184 ~~~~~~~~g~~e~L~~L~~~g~~~~v~T~k~~~~~~~~~~~l~~~~~~~~~~~~~~--~~~~~~~~~~------------ 249 (301)
T 1ltq_A 184 CDTDVINPMVVELSKMYALMGYQIVVVSGRESGTKEDPTKYYRMTRKWVEDIAGVP--LVMQCQREQG------------ 249 (301)
T ss_dssp GGGCCBCHHHHHHHHHHHHTTCEEEEEECSCCCCSSSTTHHHHHHHHHHHHTTCCC--CSEEEECCTT------------
T ss_pred ccccCCChHHHHHHHHHHHCCCeEEEEeCCCcccchhHHHHHHhcccccccccCCC--chheeeccCC------------
Confidence 3456789999999999999999999999998543 3455555 7882 2233322211
Q ss_pred eEEEecChhhHHHHHHHHHHhcCCE-EEEEcCCccCHHHHhhCCce-Eeec
Q 044020 510 QVMARSLPSDKHTLVTQLRNTFGEV-VAVTGDGTNDASALHEADIG-LAMG 558 (563)
Q Consensus 510 ~v~~~~~p~~K~~~v~~l~~~~g~~-v~~iGDg~ND~~~l~~a~vg-iamg 558 (563)
..+..|+-+..+++.+... ... +++|||..+|+.|-+.||+- |++.
T Consensus 250 --~~kp~p~~~~~~~~~~~~~-~~~~~~~vgD~~~di~~a~~aG~~~~~v~ 297 (301)
T 1ltq_A 250 --DTRKDDVVKEEIFWKHIAP-HFDVKLAIDDRTQVVEMWRRIGVECWQVA 297 (301)
T ss_dssp --CCSCHHHHHHHHHHHHTTT-TCEEEEEEECCHHHHHHHHHTTCCEEECS
T ss_pred --CCcHHHHHHHHHHHHHhcc-ccceEEEeCCcHHHHHHHHHcCCeEEEec
Confidence 0123456677777777543 334 68899999999999999984 4443
|
| >2oda_A Hypothetical protein pspto_2114; haloacid dehalogenase, phosphonoacetaldehyde hydrolase, protein binding; HET: EPE; 1.90A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=97.22 E-value=0.00025 Score=64.51 Aligned_cols=96 Identities=10% Similarity=0.088 Sum_probs=61.8
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCceeechhhhcCCCCCCCcceeEEEecChhhHHHHH
Q 044020 445 PVRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAKECGILTSDGEAVEGPEFRNMSPADIIPKLQVMARSLPSDKHTLV 524 (563)
Q Consensus 445 ~~~~~~~~~I~~l~~~gi~v~i~TGd~~~~a~~~a~~lgi~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v 524 (563)
++.|++.++++.|+++|+++.++||.....+..++. ..+ ..++.+.+. ......|+--...+
T Consensus 36 ~~~pg~~e~L~~L~~~g~~~~i~T~~~~~~~~~~~~-~~~----d~v~~~~~~-------------~~~KP~p~~~~~a~ 97 (196)
T 2oda_A 36 QLTPGAQNALKALRDQGMPCAWIDELPEALSTPLAA-PVN----DWMIAAPRP-------------TAGWPQPDACWMAL 97 (196)
T ss_dssp SBCTTHHHHHHHHHHHTCCEEEECCSCHHHHHHHHT-TTT----TTCEECCCC-------------SSCTTSTHHHHHHH
T ss_pred CcCcCHHHHHHHHHHCCCEEEEEcCChHHHHHHhcC-ccC----CEEEECCcC-------------CCCCCChHHHHHHH
Confidence 578999999999999999999999998887755443 111 122222211 01112233333344
Q ss_pred HHHHHhcCCEEEEEcCCccCHHHHhhCCc-eEeec
Q 044020 525 TQLRNTFGEVVAVTGDGTNDASALHEADI-GLAMG 558 (563)
Q Consensus 525 ~~l~~~~g~~v~~iGDg~ND~~~l~~a~v-giamg 558 (563)
+.+.....+.++||||+.+|+.+-+.||+ +|++.
T Consensus 98 ~~l~~~~~~~~v~VGDs~~Di~aA~~aG~~~i~v~ 132 (196)
T 2oda_A 98 MALNVSQLEGCVLISGDPRLLQSGLNAGLWTIGLA 132 (196)
T ss_dssp HHTTCSCSTTCEEEESCHHHHHHHHHHTCEEEEES
T ss_pred HHcCCCCCccEEEEeCCHHHHHHHHHCCCEEEEEc
Confidence 44432212679999999999999999997 44443
|
| >2zg6_A Putative uncharacterized protein ST2620, probable 2-haloalkanoic; probable 2-haloalkanoic acid dehalogenase, hydrolase, structural genomics; 2.40A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=97.21 E-value=0.00017 Score=66.73 Aligned_cols=94 Identities=9% Similarity=0.024 Sum_probs=62.5
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCceeechhhhcCCCCCCCcceeEEEecChhhHHHHH
Q 044020 445 PVRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAKECGILTSDGEAVEGPEFRNMSPADIIPKLQVMARSLPSDKHTLV 524 (563)
Q Consensus 445 ~~~~~~~~~I~~l~~~gi~v~i~TGd~~~~a~~~a~~lgi~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v 524 (563)
++.|++.++++.|+++|+++.++|+.+. .+....+.+|+......++.+.+. -.....|+--..++
T Consensus 95 ~~~~~~~~~l~~l~~~g~~~~i~Tn~~~-~~~~~l~~~gl~~~f~~~~~~~~~-------------~~~Kp~~~~~~~~~ 160 (220)
T 2zg6_A 95 FLYDDTLEFLEGLKSNGYKLALVSNASP-RVKTLLEKFDLKKYFDALALSYEI-------------KAVKPNPKIFGFAL 160 (220)
T ss_dssp EECTTHHHHHHHHHTTTCEEEECCSCHH-HHHHHHHHHTCGGGCSEEC------------------------CCHHHHHH
T ss_pred eECcCHHHHHHHHHHCCCEEEEEeCCcH-HHHHHHHhcCcHhHeeEEEecccc-------------CCCCCCHHHHHHHH
Confidence 3679999999999999999999999866 578889999986533333332221 11122233333344
Q ss_pred HHHHHhcCCEEEEEcCCcc-CHHHHhhCCceEe
Q 044020 525 TQLRNTFGEVVAVTGDGTN-DASALHEADIGLA 556 (563)
Q Consensus 525 ~~l~~~~g~~v~~iGDg~N-D~~~l~~a~vgia 556 (563)
+.+... . ++|||+.+ |+.+-+.||+...
T Consensus 161 ~~~~~~---~-~~vgD~~~~Di~~a~~aG~~~i 189 (220)
T 2zg6_A 161 AKVGYP---A-VHVGDIYELDYIGAKRSYVDPI 189 (220)
T ss_dssp HHHCSS---E-EEEESSCCCCCCCSSSCSEEEE
T ss_pred HHcCCC---e-EEEcCCchHhHHHHHHCCCeEE
Confidence 443322 3 99999999 9999999998644
|
| >2fpr_A Histidine biosynthesis bifunctional protein HISB; histidinola phosphate phosphatase, bifunctional enzyme structural genomics; 1.70A {Escherichia coli} SCOP: c.108.1.19 PDB: 2fps_A 2fpu_A* 2fpx_A 2fpw_A* | Back alignment and structure |
|---|
Probab=97.21 E-value=6.8e-05 Score=67.02 Aligned_cols=100 Identities=18% Similarity=0.142 Sum_probs=65.0
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCC---------------CHHHHHHHHHHcCCCCCCCceeec----hhhhcCCCCC
Q 044020 444 DPVRPGVKEAVQTCLEAGITVRMVTGD---------------NINTARAIAKECGILTSDGEAVEG----PEFRNMSPAD 504 (563)
Q Consensus 444 d~~~~~~~~~I~~l~~~gi~v~i~TGd---------------~~~~a~~~a~~lgi~~~~~~~~~g----~~~~~~~~~~ 504 (563)
-++.|++.++|+.|+++|++++++|+. ....+..+.+.+|+. ....++.+ .+..
T Consensus 41 ~~~~pg~~e~L~~L~~~G~~l~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~-fd~v~~s~~~~~~~~~------ 113 (176)
T 2fpr_A 41 LAFEPGVIPQLLKLQKAGYKLVMITNQDGLGTQSFPQADFDGPHNLMMQIFTSQGVQ-FDEVLICPHLPADECD------ 113 (176)
T ss_dssp CCBCTTHHHHHHHHHHTTEEEEEEEECTTTTBTTBCHHHHHHHHHHHHHHHHHTTCC-EEEEEEECCCGGGCCS------
T ss_pred CcCCccHHHHHHHHHHCCCEEEEEECCccccccccchHhhhhhHHHHHHHHHHcCCC-eeEEEEcCCCCccccc------
Confidence 357899999999999999999999998 466788889999985 11111121 1100
Q ss_pred CCcceeEEEecChhhHHHHHHHHHHhcCCEEEEEcCCccCHHHHhhCCce-Eeec
Q 044020 505 IIPKLQVMARSLPSDKHTLVTQLRNTFGEVVAVTGDGTNDASALHEADIG-LAMG 558 (563)
Q Consensus 505 ~~~~~~v~~~~~p~~K~~~v~~l~~~~g~~v~~iGDg~ND~~~l~~a~vg-iamg 558 (563)
.....|+--..+++.+... .+++++|||+.+|+.+-+.||+. |.+.
T Consensus 114 -------~~KP~p~~~~~~~~~~gi~-~~~~l~VGD~~~Di~~A~~aG~~~i~v~ 160 (176)
T 2fpr_A 114 -------CRKPKVKLVERYLAEQAMD-RANSYVIGDRATDIQLAENMGINGLRYD 160 (176)
T ss_dssp -------SSTTSCGGGGGGC----CC-GGGCEEEESSHHHHHHHHHHTSEEEECB
T ss_pred -------ccCCCHHHHHHHHHHcCCC-HHHEEEEcCCHHHHHHHHHcCCeEEEEc
Confidence 0011122222333444433 46899999999999999999985 4443
|
| >1yns_A E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo sapiens} SCOP: c.108.1.22 PDB: 1zs9_A | Back alignment and structure |
|---|
Probab=97.16 E-value=0.00081 Score=64.14 Aligned_cols=94 Identities=18% Similarity=0.202 Sum_probs=69.3
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHc---CCCCCCCceeechhhhcCCCCCCCcceeEEEecChhhHH
Q 044020 445 PVRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAKEC---GILTSDGEAVEGPEFRNMSPADIIPKLQVMARSLPSDKH 521 (563)
Q Consensus 445 ~~~~~~~~~I~~l~~~gi~v~i~TGd~~~~a~~~a~~l---gi~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~p~~K~ 521 (563)
++.|++.++++.|+++|+++.++|+.+...+..+.+.+ |+......++.+ +. . ....|+--.
T Consensus 130 ~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~~~~l~~~fd~i~~~-~~-------------~-~KP~p~~~~ 194 (261)
T 1yns_A 130 EFFADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFGHSTEGDILELVDGHFDT-KI-------------G-HKVESESYR 194 (261)
T ss_dssp CCCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHTBTTBCCGGGCSEEECG-GG-------------C-CTTCHHHHH
T ss_pred ccCcCHHHHHHHHHhCCCeEEEEeCCCHHHHHHHHHhhcccChHhhccEEEec-CC-------------C-CCCCHHHHH
Confidence 58899999999999999999999999988888877754 465433333333 21 1 233344445
Q ss_pred HHHHHHHHhcCCEEEEEcCCccCHHHHhhCCce
Q 044020 522 TLVTQLRNTFGEVVAVTGDGTNDASALHEADIG 554 (563)
Q Consensus 522 ~~v~~l~~~~g~~v~~iGDg~ND~~~l~~a~vg 554 (563)
.+++.+.-. .+.+++|||..+|+.+-+.||+-
T Consensus 195 ~~~~~lg~~-p~~~l~VgDs~~di~aA~~aG~~ 226 (261)
T 1yns_A 195 KIADSIGCS-TNNILFLTDVTREASAAEEADVH 226 (261)
T ss_dssp HHHHHHTSC-GGGEEEEESCHHHHHHHHHTTCE
T ss_pred HHHHHhCcC-cccEEEEcCCHHHHHHHHHCCCE
Confidence 556666544 57899999999999999999984
|
| >3epr_A Hydrolase, haloacid dehalogenase-like family; structural genomics, unknown function, HAD superfamily hydro PSI-2; 1.55A {Streptococcus agalactiae serogroup V} SCOP: c.108.1.14 PDB: 1ys9_A 1wvi_A 1ydf_A | Back alignment and structure |
|---|
Probab=97.12 E-value=9.4e-05 Score=70.78 Aligned_cols=42 Identities=17% Similarity=0.272 Sum_probs=38.0
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEc---CCCHHHHHHHHHHcCCCCC
Q 044020 445 PVRPGVKEAVQTCLEAGITVRMVT---GDNINTARAIAKECGILTS 487 (563)
Q Consensus 445 ~~~~~~~~~I~~l~~~gi~v~i~T---Gd~~~~a~~~a~~lgi~~~ 487 (563)
.+ ++++++|++++++|++++++| ||+........+++|+...
T Consensus 22 ~i-~~~~eal~~l~~~G~~vvl~Tn~~gr~~~~~~~~l~~lg~~~~ 66 (264)
T 3epr_A 22 RI-PAGERFIERLQEKGIPYMLVTNNTTRTPESVQEMLRGFNVETP 66 (264)
T ss_dssp EC-HHHHHHHHHHHHHTCCEEEEECCCSSCHHHHHHHHHTTTCCCC
T ss_pred EC-cCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHCCCCCC
Confidence 35 899999999999999999999 8899999999999998653
|
| >2fue_A PMM 1, PMMH-22, phosphomannomutase 1; enzyme-product complex, protein glycosyl carbohydrate-deficient glycoprotein syndrome; HET: MSE M1P; 1.75A {Homo sapiens} SCOP: c.108.1.10 PDB: 2fuc_A* | Back alignment and structure |
|---|
Probab=97.00 E-value=0.00021 Score=68.24 Aligned_cols=43 Identities=19% Similarity=0.263 Sum_probs=35.9
Q ss_pred hhHHHHHHHHHHhc-CCEEEEEcC----CccCHHHHhhCC-ceEeecCCCC
Q 044020 518 SDKHTLVTQLRNTF-GEVVAVTGD----GTNDASALHEAD-IGLAMGIAGT 562 (563)
Q Consensus 518 ~~K~~~v~~l~~~~-g~~v~~iGD----g~ND~~~l~~a~-vgiamg~~~~ 562 (563)
..|+..++.+ ... .+.|+++|| +.||++||+.|+ +|++|| ||.
T Consensus 196 vsKg~al~~l-~gi~~~~viafGDs~~~~~NDi~Ml~~~~~~g~av~-NA~ 244 (262)
T 2fue_A 196 WDKRYCLDSL-DQDSFDTIHFFGNETSPGGNDFEIFADPRTVGHSVV-SPQ 244 (262)
T ss_dssp CSTTHHHHHH-TTSCCSEEEEEESCCSTTSTTHHHHHSTTSEEEECS-SHH
T ss_pred CCHHHHHHHH-HCCCHHHEEEECCCCCCCCCCHHHHhcCccCcEEec-CCC
Confidence 4688888888 221 378999999 999999999999 599999 864
|
| >2c4n_A Protein NAGD; nucleotide phosphatase, HAD superfamily, UMP phosphatase, carbohydrate metabolism, hydrolase; 1.8A {Escherichia coli} SCOP: c.108.1.14 | Back alignment and structure |
|---|
Probab=96.96 E-value=0.00088 Score=62.64 Aligned_cols=38 Identities=16% Similarity=0.303 Sum_probs=32.7
Q ss_pred cchHHHHHHHHhCCCeEEEEc---CCCHHHHHHHHHHcCCC
Q 044020 448 PGVKEAVQTCLEAGITVRMVT---GDNINTARAIAKECGIL 485 (563)
Q Consensus 448 ~~~~~~I~~l~~~gi~v~i~T---Gd~~~~a~~~a~~lgi~ 485 (563)
+.+.++++.+++.|++++++| |++..........+|+.
T Consensus 22 ~~~~~~~~~l~~~g~~~~~~t~~~g~~~~~~~~~~~~~g~~ 62 (250)
T 2c4n_A 22 PGAAEFLHGIMDKGLPLVLLTNYPSQTGQDLANRFATAGVD 62 (250)
T ss_dssp TTHHHHHHHHHHTTCCEEEEESCCSCCHHHHHHHHHHTTCC
T ss_pred cCHHHHHHHHHHcCCcEEEEECCCCCCHHHHHHHHHHcCCC
Confidence 344889999999999999999 89888888888888875
|
| >2kmv_A Copper-transporting ATPase 1; menkes, nucleotide binding protein, alternative splicing, ATP-binding, cell membrane, cytoplasm, disease mutation; NMR {Homo sapiens} PDB: 2kmx_A* | Back alignment and structure |
|---|
Probab=96.88 E-value=0.00099 Score=59.58 Aligned_cols=32 Identities=16% Similarity=0.262 Sum_probs=23.8
Q ss_pred HHHHHHHHHHHHhHhHhhhhccCCCCCCCCCCCCCceEEEEecccCC
Q 044020 399 TDVINGFASEALRTLCLAFKDLNDSSNENNIPDSGYTLIAVVGIKDP 445 (563)
Q Consensus 399 ~~~~~~~~~~G~r~i~~a~~~l~~~~~~~~~~~~~~~~lG~i~~~d~ 445 (563)
...+..+..+|..++.+| .|..++|+|.+.|+
T Consensus 154 ~~~~~~~~~~G~T~V~va---------------idg~l~g~iavaD~ 185 (185)
T 2kmv_A 154 NDFMTEHERKGRTAVLVA---------------VDDELCGLIAIADT 185 (185)
T ss_dssp HHHHHHHHHTTCEEEEEE---------------ETTEEEEEEEEECC
T ss_pred HHHHHHHHhCCCeEEEEE---------------ECCEEEEEEEEEcC
Confidence 344566777888887777 34589999999985
|
| >2i33_A Acid phosphatase; HAD superfamily, hydrolase; 1.57A {Bacillus anthracis} PDB: 2i34_A | Back alignment and structure |
|---|
Probab=96.87 E-value=0.00067 Score=64.46 Aligned_cols=84 Identities=13% Similarity=0.224 Sum_probs=56.3
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCC---HHHHHHHHHHcCCC--CCCCceeechhhhcCCCCCCCcceeEEEecChh
Q 044020 444 DPVRPGVKEAVQTCLEAGITVRMVTGDN---INTARAIAKECGIL--TSDGEAVEGPEFRNMSPADIIPKLQVMARSLPS 518 (563)
Q Consensus 444 d~~~~~~~~~I~~l~~~gi~v~i~TGd~---~~~a~~~a~~lgi~--~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~p~ 518 (563)
.++.|++.++|+.|+++|++++++||++ ...+....+.+|+. .....++.+.. . ..|.
T Consensus 100 ~~~~pg~~e~L~~L~~~Gi~i~iaTnr~~~~~~~~~~~L~~~Gl~~v~~~~vi~~~~~--------------~---~K~~ 162 (258)
T 2i33_A 100 AEALPGSIDFLKYTESKGVDIYYISNRKTNQLDATIKNLERVGAPQATKEHILLQDPK--------------E---KGKE 162 (258)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEEEEEEGGGHHHHHHHHHHHTCSSCSTTTEEEECTT--------------C---CSSH
T ss_pred CCcCccHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHHHHHcCCCcCCCceEEECCCC--------------C---CCcH
Confidence 3578999999999999999999999998 45566677888987 33333333221 0 0122
Q ss_pred hHHHHHHHHHHhcCCEEEEEcCCccCHHHH
Q 044020 519 DKHTLVTQLRNTFGEVVAVTGDGTNDASAL 548 (563)
Q Consensus 519 ~K~~~v~~l~~~~g~~v~~iGDg~ND~~~l 548 (563)
- ...+...--..+++|||+.+|+.+-
T Consensus 163 ~----~~~~~~~~~~~~l~VGDs~~Di~aA 188 (258)
T 2i33_A 163 K----RRELVSQTHDIVLFFGDNLSDFTGF 188 (258)
T ss_dssp H----HHHHHHHHEEEEEEEESSGGGSTTC
T ss_pred H----HHHHHHhCCCceEEeCCCHHHhccc
Confidence 1 1222222024688999999999886
|
| >4as2_A Phosphorylcholine phosphatase; hydrolase, HAD superfamily, alkylammonium compounds; HET: BTB; 2.12A {Pseudomonas aeruginosa} PDB: 4as3_A* | Back alignment and structure |
|---|
Probab=96.65 E-value=0.0013 Score=64.58 Aligned_cols=116 Identities=17% Similarity=0.217 Sum_probs=72.8
Q ss_pred cCCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHc----CCCCCCCceee-----ch---------hhhcCC-CC
Q 044020 443 KDPVRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAKEC----GILTSDGEAVE-----GP---------EFRNMS-PA 503 (563)
Q Consensus 443 ~d~~~~~~~~~I~~l~~~gi~v~i~TGd~~~~a~~~a~~l----gi~~~~~~~~~-----g~---------~~~~~~-~~ 503 (563)
...+.+++++.++.|+++|++|+|+||-+..-++.+|..+ ||...+.+-.. +. ...+-. ..
T Consensus 141 ~~~~~~~~~~l~~~l~~~G~~v~ivSas~~~~v~~~a~~~~~~ygIp~e~ViG~~~~~~~~~~~~~~~~~~~~~dg~y~~ 220 (327)
T 4as2_A 141 PPRVFSGQRELYNKLMENGIEVYVISAAHEELVRMVAADPRYGYNAKPENVIGVTTLLKNRKTGELTTARKQIAEGKYDP 220 (327)
T ss_dssp CCEECHHHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHTCGGGSCCCCGGGEEEECEEEECTTTCCEECHHHHHHTTCCCG
T ss_pred ccccCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHhhcccccCCCHHHeEeeeeeeeccccccccccccccccccccc
Confidence 3457899999999999999999999999999999999985 55543211110 00 000000 00
Q ss_pred CCCcceeEEEe-----cChhhHHHHHHHHHHhcCCEEEEEcCC-ccCHHHHhh--CCceEeec
Q 044020 504 DIIPKLQVMAR-----SLPSDKHTLVTQLRNTFGEVVAVTGDG-TNDASALHE--ADIGLAMG 558 (563)
Q Consensus 504 ~~~~~~~v~~~-----~~p~~K~~~v~~l~~~~g~~v~~iGDg-~ND~~~l~~--a~vgiamg 558 (563)
.......+..+ ..-+.|...++.+...-..-++++||+ ..|.+||+. ++.|+.+-
T Consensus 221 ~~~~~~~~~~~~~~p~~~~~GK~~~I~~~i~~g~~Pi~a~Gns~dgD~~ML~~~~~~~~~~L~ 283 (327)
T 4as2_A 221 KANLDLEVTPYLWTPATWMAGKQAAILTYIDRWKRPILVAGDTPDSDGYMLFNGTAENGVHLW 283 (327)
T ss_dssp GGGTTCEEEEEECSSCSSTHHHHHHHHHHTCSSCCCSEEEESCHHHHHHHHHHTSCTTCEEEE
T ss_pred cccccccccccccccccccCccHHHHHHHHhhCCCCeEEecCCCCCCHHHHhccccCCCeEEE
Confidence 00111111111 223678888887764423568999999 579999965 45555554
|
| >2amy_A PMM 2, phosphomannomutase 2; HS.459855, HS.313504, BC008310, phosphatase, PFAM PF03332, H superfamily, jaecken disease; 2.09A {Homo sapiens} SCOP: c.108.1.10 PDB: 2q4r_A | Back alignment and structure |
|---|
Probab=96.62 E-value=0.00041 Score=65.49 Aligned_cols=43 Identities=21% Similarity=0.280 Sum_probs=33.7
Q ss_pred hhHHHHHHHHHHhc-CCEEEEEcC----CccCHHHHhhCCc-eEeecCCCC
Q 044020 518 SDKHTLVTQLRNTF-GEVVAVTGD----GTNDASALHEADI-GLAMGIAGT 562 (563)
Q Consensus 518 ~~K~~~v~~l~~~~-g~~v~~iGD----g~ND~~~l~~a~v-giamg~~~~ 562 (563)
..|+..++.+ ... .+.|+++|| +.||++||+.|+. |++|| ||.
T Consensus 187 ~~Kg~al~~l-~~i~~~~viafGD~~~~~~ND~~Ml~~a~~ag~av~-Na~ 235 (246)
T 2amy_A 187 WDKRYCLRHV-ENDGYKTIYFFGDKTMPGGNDHEIFTDPRTMGYSVT-APE 235 (246)
T ss_dssp CSGGGGGGGT-TTSCCSEEEEEECSCC---CCCHHHHCTTEEEEECS-SHH
T ss_pred CchHHHHHHH-hCCCHHHEEEECCCCCCCCCcHHHHHhCCcceEEee-CCC
Confidence 3688888887 221 378999999 9999999999998 99999 874
|
| >2ho4_A Haloacid dehalogenase-like hydrolase domain containing 2; HDHD2, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; 2.20A {Mus musculus} PDB: 3hlt_A | Back alignment and structure |
|---|
Probab=96.34 E-value=0.011 Score=55.69 Aligned_cols=45 Identities=24% Similarity=0.300 Sum_probs=35.0
Q ss_pred cCCCCcchHHHHHHHHhCCCeEEEEc---CCCHHHHHHHHHHcCCCCC
Q 044020 443 KDPVRPGVKEAVQTCLEAGITVRMVT---GDNINTARAIAKECGILTS 487 (563)
Q Consensus 443 ~d~~~~~~~~~I~~l~~~gi~v~i~T---Gd~~~~a~~~a~~lgi~~~ 487 (563)
.+.+-+++.++++.+++.|++++++| |++........+.+|+...
T Consensus 21 ~~~~~~~~~~ai~~l~~~G~~~~~~t~~~~~~~~~~~~~l~~~g~~~~ 68 (259)
T 2ho4_A 21 EDAAVPGAQEALKRLRATSVMVRFVTNTTKETKKDLLERLKKLEFEIS 68 (259)
T ss_dssp ---CCTTHHHHHHHHHTSSCEEEEEECCSSCCHHHHHHHHHHTTCCCC
T ss_pred CCEeCcCHHHHHHHHHHCCCeEEEEeCCCCcCHHHHHHHHHHcCCCcc
Confidence 45566789999999999999999999 6777777777778887643
|
| >2p11_A Hypothetical protein; putative haloacid dehalogenase-like hydrolase, structural GE joint center for structural genomics, JCSG; 2.20A {Burkholderia xenovorans} | Back alignment and structure |
|---|
Probab=96.22 E-value=0.0045 Score=57.49 Aligned_cols=87 Identities=13% Similarity=0.132 Sum_probs=60.5
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCceeechhhhcCCCCCCCcceeEEEecChhhHHHHH
Q 044020 445 PVRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAKECGILTSDGEAVEGPEFRNMSPADIIPKLQVMARSLPSDKHTLV 524 (563)
Q Consensus 445 ~~~~~~~~~I~~l~~~gi~v~i~TGd~~~~a~~~a~~lgi~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v 524 (563)
++.|++.++++.|+++| ++.++|+.+...+....+.+|+......+ +... ..|..++
T Consensus 96 ~~~~g~~~~l~~l~~~g-~~~i~Tn~~~~~~~~~l~~~gl~~~f~~~-------------------~~~~---~~K~~~~ 152 (231)
T 2p11_A 96 RVYPGALNALRHLGARG-PTVILSDGDVVFQPRKIARSGLWDEVEGR-------------------VLIY---IHKELML 152 (231)
T ss_dssp GBCTTHHHHHHHHHTTS-CEEEEEECCSSHHHHHHHHTTHHHHTTTC-------------------EEEE---SSGGGCH
T ss_pred CcCccHHHHHHHHHhCC-CEEEEeCCCHHHHHHHHHHcCcHHhcCee-------------------EEec---CChHHHH
Confidence 57899999999999999 99999999999999999999875311000 1111 1222233
Q ss_pred HHHHHh-cCCEEEEEcCCcc---CHHHHhhCCce
Q 044020 525 TQLRNT-FGEVVAVTGDGTN---DASALHEADIG 554 (563)
Q Consensus 525 ~~l~~~-~g~~v~~iGDg~N---D~~~l~~a~vg 554 (563)
+.+.+. -.+.+++|||+.+ |+.+-+.||+.
T Consensus 153 ~~~~~~~~~~~~~~vgDs~~d~~di~~A~~aG~~ 186 (231)
T 2p11_A 153 DQVMECYPARHYVMVDDKLRILAAMKKAWGARLT 186 (231)
T ss_dssp HHHHHHSCCSEEEEECSCHHHHHHHHHHHGGGEE
T ss_pred HHHHhcCCCceEEEEcCccchhhhhHHHHHcCCe
Confidence 333222 1579999999999 66666777863
|
| >3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism, detoxification, magnesium, metal-binding, peroxisome; HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P* 1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A* 4hai_A* 1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A* | Back alignment and structure |
|---|
Probab=96.05 E-value=0.0017 Score=68.56 Aligned_cols=97 Identities=11% Similarity=0.091 Sum_probs=64.9
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCC------CHHHHHHHHHHcCCCCCCCceeechhhhcCCCCCCCcceeEEEecChh
Q 044020 445 PVRPGVKEAVQTCLEAGITVRMVTGD------NINTARAIAKECGILTSDGEAVEGPEFRNMSPADIIPKLQVMARSLPS 518 (563)
Q Consensus 445 ~~~~~~~~~I~~l~~~gi~v~i~TGd------~~~~a~~~a~~lgi~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~p~ 518 (563)
++.+++.++++.|+++|+++.++|+. .......... |+......++.+.+.. .....|+
T Consensus 100 ~~~~~~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~~~~~~~~~--~l~~~fd~i~~~~~~~-------------~~KP~p~ 164 (555)
T 3i28_A 100 KINRPMLQAALMLRKKGFTTAILTNTWLDDRAERDGLAQLMC--ELKMHFDFLIESCQVG-------------MVKPEPQ 164 (555)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEECCCCCCSTTHHHHHHHHH--HHHTTSSEEEEHHHHT-------------CCTTCHH
T ss_pred CcChhHHHHHHHHHHCCCEEEEEeCCCccccchhhHHHHHhh--hhhhheeEEEeccccC-------------CCCCCHH
Confidence 57899999999999999999999996 3222222221 4433333444444331 1123344
Q ss_pred hHHHHHHHHHHhcCCEEEEEcCCccCHHHHhhCCceEee
Q 044020 519 DKHTLVTQLRNTFGEVVAVTGDGTNDASALHEADIGLAM 557 (563)
Q Consensus 519 ~K~~~v~~l~~~~g~~v~~iGDg~ND~~~l~~a~vgiam 557 (563)
--..+++.+.-. .+++++|||+.+|+.+.+.||+....
T Consensus 165 ~~~~~~~~lg~~-p~~~~~v~D~~~di~~a~~aG~~~~~ 202 (555)
T 3i28_A 165 IYKFLLDTLKAS-PSEVVFLDDIGANLKPARDLGMVTIL 202 (555)
T ss_dssp HHHHHHHHHTCC-GGGEEEEESCHHHHHHHHHHTCEEEE
T ss_pred HHHHHHHHcCCC-hhHEEEECCcHHHHHHHHHcCCEEEE
Confidence 445555555544 57899999999999999999996544
|
| >2oyc_A PLP phosphatase, pyridoxal phosphate phosphatase; structural genomics, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI-2; 1.72A {Homo sapiens} PDB: 2p27_A 2p69_A* 2cft_A* 2cfs_A 2cfr_A* | Back alignment and structure |
|---|
Probab=95.98 E-value=0.0043 Score=60.51 Aligned_cols=43 Identities=16% Similarity=0.132 Sum_probs=37.8
Q ss_pred cCCCCcchHHHHHHHHhCCCeEEEEc---CCCHHHHHHHHHHcCCC
Q 044020 443 KDPVRPGVKEAVQTCLEAGITVRMVT---GDNINTARAIAKECGIL 485 (563)
Q Consensus 443 ~d~~~~~~~~~I~~l~~~gi~v~i~T---Gd~~~~a~~~a~~lgi~ 485 (563)
.+++-+++.+++++|+++|++++++| |++........+.+|+.
T Consensus 35 ~~~~~~~~~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~~~~~~g~~ 80 (306)
T 2oyc_A 35 GERAVPGAPELLERLARAGKAALFVSNNSRRARPELALRFARLGFG 80 (306)
T ss_dssp TTEECTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHHHHHHTTCC
T ss_pred CCccCcCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHhcCCC
Confidence 45677899999999999999999999 68888888888888886
|
| >2obb_A Hypothetical protein; structural genomics, PSI-2, PR structure initiative, midwest center for structural genomic unknown function; 2.20A {Bacteroides thetaiotaomicron} SCOP: c.108.1.25 | Back alignment and structure |
|---|
Probab=95.68 E-value=0.0085 Score=50.82 Aligned_cols=41 Identities=10% Similarity=0.041 Sum_probs=35.5
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCC---HHHHHHHHHHcCCCC
Q 044020 446 VRPGVKEAVQTCLEAGITVRMVTGDN---INTARAIAKECGILT 486 (563)
Q Consensus 446 ~~~~~~~~I~~l~~~gi~v~i~TGd~---~~~a~~~a~~lgi~~ 486 (563)
+.++++++|++|+++|++++++|||+ ...+...+++.|+..
T Consensus 25 ~~~~~~~al~~l~~~G~~iii~TgR~~~~~~~~~~~l~~~gi~~ 68 (142)
T 2obb_A 25 EIPFAVETLKLLQQEKHRLILWSVREGELLDEAIEWCRARGLEF 68 (142)
T ss_dssp BCTTHHHHHHHHHHTTCEEEECCSCCHHHHHHHHHHHHTTTCCC
T ss_pred cCHHHHHHHHHHHHCCCEEEEEeCCCcccHHHHHHHHHHcCCCe
Confidence 45789999999999999999999998 567788888888853
|
| >2b82_A APHA, class B acid phosphatase; DDDD acid phosphatase, metallo-ENZ hydrolase; HET: ADN; 1.25A {Escherichia coli} SCOP: c.108.1.12 PDB: 2b8j_A* 2hf7_A 1rmt_A* 1n9k_A 1rmq_A 1n8n_A* 1rmy_A* 2g1a_A* 3cz4_A 2heg_A* 1z5g_A 1z5u_A* 1z88_A 2aut_A | Back alignment and structure |
|---|
Probab=95.66 E-value=0.0022 Score=58.85 Aligned_cols=86 Identities=15% Similarity=0.198 Sum_probs=53.8
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHH----cCCCCCCCceeechhhhcCCCCCCCcceeEEE--ecChhh
Q 044020 446 VRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAKE----CGILTSDGEAVEGPEFRNMSPADIIPKLQVMA--RSLPSD 519 (563)
Q Consensus 446 ~~~~~~~~I~~l~~~gi~v~i~TGd~~~~a~~~a~~----lgi~~~~~~~~~g~~~~~~~~~~~~~~~~v~~--~~~p~~ 519 (563)
+.+++.++++.|+++|+++.++|+++...+..+.+. ++... .+.+. ..+. ...|+-
T Consensus 89 ~~~~~~e~l~~L~~~G~~l~ivTn~~~~~~~~~l~~l~~~f~~i~------~~~~~------------~~~~~~KP~p~~ 150 (211)
T 2b82_A 89 PKEVARQLIDMHVRRGDAIFFVTGRSPTKTETVSKTLADNFHIPA------TNMNP------------VIFAGDKPGQNT 150 (211)
T ss_dssp ECHHHHHHHHHHHHHTCEEEEEECSCCCSSCCHHHHHHHHTTCCT------TTBCC------------CEECCCCTTCCC
T ss_pred CcHHHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHHHHhcCccc------cccch------------hhhcCCCCCHHH
Confidence 467899999999999999999999975433333332 32210 00000 0111 122333
Q ss_pred HHHHHHHHHHhcCCEEEEEcCCccCHHHHhhCCce
Q 044020 520 KHTLVTQLRNTFGEVVAVTGDGTNDASALHEADIG 554 (563)
Q Consensus 520 K~~~v~~l~~~~g~~v~~iGDg~ND~~~l~~a~vg 554 (563)
...++ ++ +|- +++|||..+|+.+-+.||+-
T Consensus 151 ~~~~~---~~-~g~-~l~VGDs~~Di~aA~~aG~~ 180 (211)
T 2b82_A 151 KSQWL---QD-KNI-RIFYGDSDNDITAARDVGAR 180 (211)
T ss_dssp SHHHH---HH-TTE-EEEEESSHHHHHHHHHTTCE
T ss_pred HHHHH---HH-CCC-EEEEECCHHHHHHHHHCCCe
Confidence 33333 33 254 99999999999999999984
|
| >3zvl_A Bifunctional polynucleotide phosphatase/kinase; hydrolase-transferase complex, base excision repair, BER, non-homologous END-joining, NHEJ; 1.65A {Mus musculus} PDB: 3zvm_A* 3zvn_A* 1yj5_A 3u7e_B* 3u7f_B* 3u7h_B* 3u7g_A* | Back alignment and structure |
|---|
Probab=95.07 E-value=0.009 Score=60.97 Aligned_cols=94 Identities=14% Similarity=0.114 Sum_probs=60.1
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCC------------HHHHHHHHHHcCCCCCCCceeechhhhcCCCCCCCcceeEEE
Q 044020 446 VRPGVKEAVQTCLEAGITVRMVTGDN------------INTARAIAKECGILTSDGEAVEGPEFRNMSPADIIPKLQVMA 513 (563)
Q Consensus 446 ~~~~~~~~I~~l~~~gi~v~i~TGd~------------~~~a~~~a~~lgi~~~~~~~~~g~~~~~~~~~~~~~~~~v~~ 513 (563)
+.|++.++|+.|+++|++++++|+.+ ...+..+.+.+|+. ...++...+. .+.
T Consensus 88 ~~pgv~e~L~~L~~~G~~l~IvTN~~gi~~g~~~~~~~~~~~~~~l~~lgl~--fd~i~~~~~~-------------~~~ 152 (416)
T 3zvl_A 88 LYPEIPKKLQELAAEGYKLVIFTNQMGIGRGKLPAEVFKGKVEAVLEKLGVP--FQVLVATHAG-------------LNR 152 (416)
T ss_dssp SCTTHHHHHHHHHHTTCEEEEEEECHHHHTTSSCHHHHHHHHHHHHHHHTSC--CEEEEECSSS-------------TTS
T ss_pred hcccHHHHHHHHHHCCCeEEEEeCCccccCCCCCHHHHHHHHHHHHHHcCCC--EEEEEECCCC-------------CCC
Confidence 67999999999999999999999965 22377888899974 1122221110 001
Q ss_pred ecChhhHHHHHHHHH----HhcCCEEEEEcCCc-----------------cCHHHHhhCCceE
Q 044020 514 RSLPSDKHTLVTQLR----NTFGEVVAVTGDGT-----------------NDASALHEADIGL 555 (563)
Q Consensus 514 ~~~p~~K~~~v~~l~----~~~g~~v~~iGDg~-----------------ND~~~l~~a~vgi 555 (563)
...|.--..+++.+. -. .+.++||||.. +|+.+-+.||+-.
T Consensus 153 KP~p~~~~~a~~~l~~~~~v~-~~~~l~VGDs~gr~~~~~~~~~~~d~s~~Di~~A~~aGi~f 214 (416)
T 3zvl_A 153 KPVSGMWDHLQEQANEGIPIS-VEDSVFVGDAAGRLANWAPGRKKKDFSCADRLFALNVGLPF 214 (416)
T ss_dssp TTSSHHHHHHHHHSSTTCCCC-GGGCEEECSCSCBCTTSSTTCCSCCSCCHHHHHHHHHTCCE
T ss_pred CCCHHHHHHHHHHhCCCCCCC-HHHeEEEECCCCCcccccccccccCCChhhHHHHHHcCCcc
Confidence 112222233333332 11 36799999997 6888888887753
|
| >2g80_A Protein UTR4; YEL038W, UTR4 protein (unknown transcript 4 protein), struct genomics, PSI, protein structure initiative; 2.28A {Saccharomyces cerevisiae} SCOP: c.108.1.22 | Back alignment and structure |
|---|
Probab=94.45 E-value=0.059 Score=50.77 Aligned_cols=90 Identities=8% Similarity=0.068 Sum_probs=60.7
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHc--C---------CCCCCCceeechhhhcCCCCCCCcceeE-E
Q 044020 445 PVRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAKEC--G---------ILTSDGEAVEGPEFRNMSPADIIPKLQV-M 512 (563)
Q Consensus 445 ~~~~~~~~~I~~l~~~gi~v~i~TGd~~~~a~~~a~~l--g---------i~~~~~~~~~g~~~~~~~~~~~~~~~~v-~ 512 (563)
++.|++.++++. |+++.++|+.+...+..+.+.+ | +...-...+.. .+ -
T Consensus 125 ~~~pgv~e~L~~----g~~l~i~Tn~~~~~~~~~l~~~~~g~~~~~~~l~l~~~~~~~f~~---------------~~~g 185 (253)
T 2g80_A 125 PVYADAIDFIKR----KKRVFIYSSGSVKAQKLLFGYVQDPNAPAHDSLDLNSYIDGYFDI---------------NTSG 185 (253)
T ss_dssp CCCHHHHHHHHH----CSCEEEECSSCHHHHHHHHHSBCCTTCTTSCCBCCGGGCCEEECH---------------HHHC
T ss_pred CCCCCHHHHHHc----CCEEEEEeCCCHHHHHHHHHhhcccccccccccchHhhcceEEee---------------eccC
Confidence 577899888888 9999999999999888888876 4 21100000000 01 0
Q ss_pred EecChhhHHHHHHHHHHhcCCEEEEEcCCccCHHHHhhCCce
Q 044020 513 ARSLPSDKHTLVTQLRNTFGEVVAVTGDGTNDASALHEADIG 554 (563)
Q Consensus 513 ~~~~p~~K~~~v~~l~~~~g~~v~~iGDg~ND~~~l~~a~vg 554 (563)
....|+--..+++.+.-. .+++++|||+.+|+.+-+.||+-
T Consensus 186 ~KP~p~~~~~a~~~lg~~-p~~~l~vgDs~~di~aA~~aG~~ 226 (253)
T 2g80_A 186 KKTETQSYANILRDIGAK-ASEVLFLSDNPLELDAAAGVGIA 226 (253)
T ss_dssp CTTCHHHHHHHHHHHTCC-GGGEEEEESCHHHHHHHHTTTCE
T ss_pred CCCCHHHHHHHHHHcCCC-cccEEEEcCCHHHHHHHHHcCCE
Confidence 122344444555555544 57899999999999999999984
|
| >1yv9_A Hydrolase, haloacid dehalogenase family; hypothetical protein, struc genomics, PSI, protein structure initiative; 2.80A {Enterococcus faecalis} SCOP: c.108.1.14 | Back alignment and structure |
|---|
Probab=94.12 E-value=0.017 Score=54.73 Aligned_cols=44 Identities=18% Similarity=0.222 Sum_probs=34.8
Q ss_pred cCCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHH----cCCCC
Q 044020 443 KDPVRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAKE----CGILT 486 (563)
Q Consensus 443 ~d~~~~~~~~~I~~l~~~gi~v~i~TGd~~~~a~~~a~~----lgi~~ 486 (563)
.+..-+++.++++.+++.|+++.++||+...+...+++. +|+..
T Consensus 19 ~~~~~~~~~~~l~~l~~~g~~~~~~t~~~~~~~~~~~~~l~~~~g~~~ 66 (264)
T 1yv9_A 19 GKEPIPAGKRFVERLQEKDLPFLFVTNNTTKSPETVAQRLANEFDIHV 66 (264)
T ss_dssp TTEECHHHHHHHHHHHHTTCCEEEEECCCSSCHHHHHHHHHHHSCCCC
T ss_pred CCEECcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHhcCCCC
Confidence 344447899999999999999999999987766666654 88754
|
| >2i7d_A 5'(3')-deoxyribonucleotidase, cytosolic type; hydrolase; HET: DUR; 1.20A {Homo sapiens} PDB: 2jar_A* 2jao_A* | Back alignment and structure |
|---|
Probab=94.05 E-value=0.00083 Score=60.70 Aligned_cols=79 Identities=16% Similarity=0.187 Sum_probs=57.1
Q ss_pred CCCCcchHHHHHHHHhC-CCeEEEEcCCCHHHHHHHHHHcCCCCCCCceeechhhhcCCCCCCCcceeEEEecChhhHHH
Q 044020 444 DPVRPGVKEAVQTCLEA-GITVRMVTGDNINTARAIAKECGILTSDGEAVEGPEFRNMSPADIIPKLQVMARSLPSDKHT 522 (563)
Q Consensus 444 d~~~~~~~~~I~~l~~~-gi~v~i~TGd~~~~a~~~a~~lgi~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~p~~K~~ 522 (563)
-++.|++.++++.|+++ |+++.++|+.+...+..+.+.+|+.. . +++ + .
T Consensus 72 ~~~~~g~~e~L~~L~~~~g~~~~ivT~~~~~~~~~~l~~~glf~---~--------------------i~~---~----~ 121 (193)
T 2i7d_A 72 LEPIPGALDAVREMNDLPDTQVFICTSPLLKYHHCVGEKYRWVE---Q--------------------HLG---P----Q 121 (193)
T ss_dssp CCBCTTHHHHHHHHHTSTTEEEEEEECCCSSCTTTHHHHHHHHH---H--------------------HHC---H----H
T ss_pred CccCcCHHHHHHHHHhCCCCeEEEEeCCChhhHHHHHHHhCchh---h--------------------hcC---H----H
Confidence 35789999999999999 99999999998888888888877610 0 111 1 1
Q ss_pred HHHHHHHhcCCEEEEEcCCccC----HHHHh-hCCc
Q 044020 523 LVTQLRNTFGEVVAVTGDGTND----ASALH-EADI 553 (563)
Q Consensus 523 ~v~~l~~~~g~~v~~iGDg~ND----~~~l~-~a~v 553 (563)
.++.+... .+.+++|||+.+| +.+-+ .||+
T Consensus 122 ~~~~~~~~-~~~~~~vgDs~~dD~~~i~~A~~~aG~ 156 (193)
T 2i7d_A 122 FVERIILT-RDKTVVLGDLLIDDKDTVRGQEETPSW 156 (193)
T ss_dssp HHTTEEEC-SCGGGBCCSEEEESSSCCCSSCSSCSS
T ss_pred HHHHcCCC-cccEEEECCchhhCcHHHhhccccccc
Confidence 33333333 4778999999998 66655 6665
|
| >2arf_A Wilson disease ATPase; P-type ATPase,ATP7B, copper transport, nucleotide binding, ATP binding, hydrolase; NMR {Homo sapiens} PDB: 2koy_A | Back alignment and structure |
|---|
Probab=93.67 E-value=0.041 Score=48.06 Aligned_cols=30 Identities=17% Similarity=0.264 Sum_probs=21.4
Q ss_pred HHHHHHHHHHHhHhHhhhhccCCCCCCCCCCCCCceEEEEecccC
Q 044020 400 DVINGFASEALRTLCLAFKDLNDSSNENNIPDSGYTLIAVVGIKD 444 (563)
Q Consensus 400 ~~~~~~~~~G~r~i~~a~~~l~~~~~~~~~~~~~~~~lG~i~~~d 444 (563)
..+..+..+|..++.+| .|..++|+|.+.|
T Consensus 136 ~~~~~~~~~G~T~v~va---------------~dg~~~g~i~l~D 165 (165)
T 2arf_A 136 DAMTDHEMKGQTAILVA---------------IDGVLCGMIAIAD 165 (165)
T ss_dssp HHHHHHHTTTSEEEEEE---------------ETTEEEEEEEECC
T ss_pred HHHHHHHhCCCeEEEEE---------------ECCEEEEEEEEEC
Confidence 34455666787777777 3458999999886
|
| >2hhl_A CTD small phosphatase-like protein; CTD phosphatase, keggins anion, structural genomics, PSI, protein structure initiative; HET: KEG; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=90.43 E-value=0.031 Score=50.38 Aligned_cols=93 Identities=13% Similarity=-0.004 Sum_probs=65.5
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCceeechhhhcCCCCCCCcceeEEEecChhhHHHH
Q 044020 444 DPVRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAKECGILTSDGEAVEGPEFRNMSPADIIPKLQVMARSLPSDKHTL 523 (563)
Q Consensus 444 d~~~~~~~~~I~~l~~~gi~v~i~TGd~~~~a~~~a~~lgi~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~p~~K~~~ 523 (563)
-.+||++.+.++.|++. +++++.|.-...-|..+.+.+++......++.+++.. ..|..+
T Consensus 67 v~~RPgv~efL~~l~~~-~~i~I~Tss~~~~a~~vl~~ld~~~~f~~~l~rd~~~-------------------~~k~~~ 126 (195)
T 2hhl_A 67 VLKRPHVDEFLQRMGQL-FECVLFTASLAKYADPVADLLDRWGVFRARLFRESCV-------------------FHRGNY 126 (195)
T ss_dssp EEECTTHHHHHHHHHHH-SEEEEECSSCHHHHHHHHHHHCCSSCEEEEECGGGCE-------------------EETTEE
T ss_pred EEeCcCHHHHHHHHHcC-CeEEEEcCCCHHHHHHHHHHhCCcccEEEEEEcccce-------------------ecCCce
Confidence 35799999999999998 9999999999999999999999875322233322211 112222
Q ss_pred HHHHHHh--cCCEEEEEcCCccCHHHHhhCCceEe
Q 044020 524 VTQLRNT--FGEVVAVTGDGTNDASALHEADIGLA 556 (563)
Q Consensus 524 v~~l~~~--~g~~v~~iGDg~ND~~~l~~a~vgia 556 (563)
++.+..- -...|++|+|..+++.+=..+++-|.
T Consensus 127 lK~L~~Lg~~~~~~vivDDs~~~~~~~~~ngi~i~ 161 (195)
T 2hhl_A 127 VKDLSRLGRELSKVIIVDNSPASYIFHPENAVPVQ 161 (195)
T ss_dssp ECCGGGSSSCGGGEEEEESCGGGGTTCGGGEEECC
T ss_pred eeeHhHhCCChhHEEEEECCHHHhhhCccCccEEe
Confidence 2233221 03679999999999988777776653
|
| >2ght_A Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1; protein-peptide complex, HAD superfamily, hydrolase; HET: SEP; 1.80A {Homo sapiens} PDB: 2ghq_A* 3pgl_A* 1t9z_A* 1ta0_A* 3l0c_A 3l0y_A 3l0b_A* 2q5e_A | Back alignment and structure |
|---|
Probab=89.88 E-value=0.043 Score=48.75 Aligned_cols=92 Identities=14% Similarity=0.022 Sum_probs=64.4
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCceeechhhhcCCCCCCCcceeEEEecChhhHHHHH
Q 044020 445 PVRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAKECGILTSDGEAVEGPEFRNMSPADIIPKLQVMARSLPSDKHTLV 524 (563)
Q Consensus 445 ~~~~~~~~~I~~l~~~gi~v~i~TGd~~~~a~~~a~~lgi~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v 524 (563)
.+||++.+.++.+.+. +++++.|.-...-|..+.+.++.......++.+++.. ..|..++
T Consensus 55 ~~rPg~~efL~~l~~~-~~i~I~T~~~~~~a~~vl~~ld~~~~f~~~~~rd~~~-------------------~~k~~~~ 114 (181)
T 2ght_A 55 LKRPHVDEFLQRMGEL-FECVLFTASLAKYADPVADLLDKWGAFRARLFRESCV-------------------FHRGNYV 114 (181)
T ss_dssp EECTTHHHHHHHHHHH-SEEEEECSSCHHHHHHHHHHHCTTCCEEEEECGGGSE-------------------EETTEEE
T ss_pred EeCCCHHHHHHHHHhC-CCEEEEcCCCHHHHHHHHHHHCCCCcEEEEEeccCce-------------------ecCCcEe
Confidence 5899999999999998 9999999999999999999999865222222222210 0122222
Q ss_pred HHHHHh--cCCEEEEEcCCccCHHHHhhCCceEe
Q 044020 525 TQLRNT--FGEVVAVTGDGTNDASALHEADIGLA 556 (563)
Q Consensus 525 ~~l~~~--~g~~v~~iGDg~ND~~~l~~a~vgia 556 (563)
+.+..- -...+++|||..++..+=..+++-|.
T Consensus 115 k~L~~Lg~~~~~~vivdDs~~~~~~~~~ngi~i~ 148 (181)
T 2ght_A 115 KDLSRLGRDLRRVLILDNSPASYVFHPDNAVPVA 148 (181)
T ss_dssp CCGGGTCSCGGGEEEECSCGGGGTTCTTSBCCCC
T ss_pred ccHHHhCCCcceEEEEeCCHHHhccCcCCEeEec
Confidence 223221 03679999999999988777776553
|
| >2hx1_A Predicted sugar phosphatases of the HAD superfamily; ZP_00311070.1, possible sugar phosphatase, structural genomics; HET: MSE EPE; 2.10A {Cytophaga hutchinsonii} | Back alignment and structure |
|---|
Probab=89.08 E-value=0.69 Score=43.90 Aligned_cols=43 Identities=14% Similarity=0.223 Sum_probs=38.0
Q ss_pred cCCCCcchHHHHHHHHhCCCeEEEEcC---CCHHHHHHHHHHcCCC
Q 044020 443 KDPVRPGVKEAVQTCLEAGITVRMVTG---DNINTARAIAKECGIL 485 (563)
Q Consensus 443 ~d~~~~~~~~~I~~l~~~gi~v~i~TG---d~~~~a~~~a~~lgi~ 485 (563)
.+.+-+++.++|++++++|++++++|+ ++........+++|+.
T Consensus 28 ~~~~~~~~~~~l~~l~~~g~~~~~~Tn~~~r~~~~~~~~l~~lg~~ 73 (284)
T 2hx1_A 28 YNGLLPGIENTFDYLKAQGQDYYIVTNDASRSPEQLADSYHKLGLF 73 (284)
T ss_dssp TTEECTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHHHHHHTTCT
T ss_pred CCeeChhHHHHHHHHHHCCCEEEEEeCCCCcCHHHHHHHHHHCCcC
Confidence 455668999999999999999999995 8888888899999986
|
| >1xpj_A Hypothetical protein; structural genomics, MCSG, protein STR initiative, PSI, midwest center for structural genomics, UN function; HET: TLA; 2.30A {Vibrio cholerae} SCOP: c.108.1.18 | Back alignment and structure |
|---|
Probab=88.75 E-value=0.55 Score=38.62 Aligned_cols=29 Identities=21% Similarity=0.275 Sum_probs=26.2
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHH
Q 044020 445 PVRPGVKEAVQTCLEAGITVRMVTGDNIN 473 (563)
Q Consensus 445 ~~~~~~~~~I~~l~~~gi~v~i~TGd~~~ 473 (563)
.+.+.+.+++++++++|++++++|||+..
T Consensus 24 ~~~~~~~~~l~~l~~~Gi~~~iaTGR~~~ 52 (126)
T 1xpj_A 24 LPRLDVIEQLREYHQLGFEIVISTARNMR 52 (126)
T ss_dssp CBCHHHHHHHHHHHHTTCEEEEEECTTTT
T ss_pred CCCHHHHHHHHHHHhCCCeEEEEeCCChh
Confidence 46788999999999999999999999864
|
| >3bwv_A Putative 5'(3')-deoxyribonucleotidase; NP_764060.1, deoxyribonucleotidase-like protein; HET: MSE; 1.55A {Staphylococcus epidermidis} | Back alignment and structure |
|---|
Probab=85.97 E-value=1.4 Score=38.46 Aligned_cols=25 Identities=24% Similarity=0.290 Sum_probs=23.1
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCC
Q 044020 445 PVRPGVKEAVQTCLEAGITVRMVTGD 470 (563)
Q Consensus 445 ~~~~~~~~~I~~l~~~gi~v~i~TGd 470 (563)
++.|++.++++.|++. +++.++|+.
T Consensus 69 ~~~pg~~e~L~~L~~~-~~~~i~T~~ 93 (180)
T 3bwv_A 69 DVMPHAQEVVKQLNEH-YDIYIATAA 93 (180)
T ss_dssp CBCTTHHHHHHHHTTT-SEEEEEECC
T ss_pred CCCcCHHHHHHHHHhc-CCEEEEeCC
Confidence 5789999999999985 999999998
|
| >2fue_A PMM 1, PMMH-22, phosphomannomutase 1; enzyme-product complex, protein glycosyl carbohydrate-deficient glycoprotein syndrome; HET: MSE M1P; 1.75A {Homo sapiens} SCOP: c.108.1.10 PDB: 2fuc_A* | Back alignment and structure |
|---|
Probab=84.84 E-value=0.84 Score=42.82 Aligned_cols=35 Identities=14% Similarity=0.217 Sum_probs=30.1
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHH
Q 044020 444 DPVRPGVKEAVQTCLEAGITVRMVTGDNINTARAIA 479 (563)
Q Consensus 444 d~~~~~~~~~I~~l~~~gi~v~i~TGd~~~~a~~~a 479 (563)
..+.+.++++|++|+++ ++|+++|||+...+....
T Consensus 29 ~~is~~~~~al~~l~~~-i~v~iaTGR~~~~~~~~l 63 (262)
T 2fue_A 29 QKIDPEVAAFLQKLRSR-VQIGVVGGSDYCKIAEQL 63 (262)
T ss_dssp SCCCHHHHHHHHHHTTT-SEEEEECSSCHHHHHHHH
T ss_pred CcCCHHHHHHHHHHHhC-CEEEEEcCCCHHHHHHHH
Confidence 45889999999999999 999999999987765544
|
| >2amy_A PMM 2, phosphomannomutase 2; HS.459855, HS.313504, BC008310, phosphatase, PFAM PF03332, H superfamily, jaecken disease; 2.09A {Homo sapiens} SCOP: c.108.1.10 PDB: 2q4r_A | Back alignment and structure |
|---|
Probab=83.95 E-value=0.98 Score=41.81 Aligned_cols=37 Identities=14% Similarity=0.326 Sum_probs=31.2
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCC
Q 044020 444 DPVRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAKECGI 484 (563)
Q Consensus 444 d~~~~~~~~~I~~l~~~gi~v~i~TGd~~~~a~~~a~~lgi 484 (563)
..+.+.++++|++|+++ ++|+++|||+... +.+.+++
T Consensus 22 ~~i~~~~~~al~~l~~~-i~v~iaTGR~~~~---~~~~l~~ 58 (246)
T 2amy_A 22 QKITKEMDDFLQKLRQK-IKIGVVGGSDFEK---VQEQLGN 58 (246)
T ss_dssp SCCCHHHHHHHHHHTTT-SEEEEECSSCHHH---HHHHHCT
T ss_pred cccCHHHHHHHHHHHhC-CeEEEEcCCCHHH---HHHHhcc
Confidence 45889999999999999 9999999998754 5566664
|
| >2jc9_A Cytosolic purine 5'-nucleotidase; cytosolic 5-prime nucleotidase II, GMP-IMP specific nucleotidase, CN-II, NT5C2, hydrolase, polymorphism; HET: ADN; 1.5A {Homo sapiens} PDB: 2j2c_A* 2xje_A* 2xjf_A* 2jcm_A* 2xcw_A* 2xcv_A* 2xcx_A 2xjb_A* 2xjc_A* 2xjd_A* | Back alignment and structure |
|---|
Probab=83.93 E-value=1.4 Score=45.65 Aligned_cols=37 Identities=14% Similarity=0.097 Sum_probs=34.2
Q ss_pred CcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHc-CC
Q 044020 447 RPGVKEAVQTCLEAGITVRMVTGDNINTARAIAKEC-GI 484 (563)
Q Consensus 447 ~~~~~~~I~~l~~~gi~v~i~TGd~~~~a~~~a~~l-gi 484 (563)
.++....+++|+++| ++.++|.-+..-+..++..+ |+
T Consensus 248 dp~l~~~L~~Lr~~G-KlfLiTNS~~~yv~~~m~yllg~ 285 (555)
T 2jc9_A 248 DGKLPLLLSRMKEVG-KVFLATNSDYKYTDKIMTYLFDF 285 (555)
T ss_dssp CTHHHHHHHHHHHHS-EEEEECSSCHHHHHHHHHHHTCS
T ss_pred ChHHHHHHHHHHHcC-CEEEEeCCChHHHHHHHHHhcCC
Confidence 468999999999999 99999999999999999998 75
|
| >1zjj_A Hypothetical protein PH1952; alpha/beta hydrolase fold, HAD superfamily, structural genom riken structural genomics/proteomics initiative; 1.85A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=83.83 E-value=0.4 Score=45.08 Aligned_cols=42 Identities=26% Similarity=0.420 Sum_probs=34.4
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHH---cCCC
Q 044020 444 DPVRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAKE---CGIL 485 (563)
Q Consensus 444 d~~~~~~~~~I~~l~~~gi~v~i~TGd~~~~a~~~a~~---lgi~ 485 (563)
+.+-+++.+++++++++|++++++|||+..+...++++ +|+.
T Consensus 16 ~~~~~~~~~~l~~l~~~g~~~~~~T~r~~~~~~~~~~~l~~lg~~ 60 (263)
T 1zjj_A 16 NRAIPGVRELIEFLKERGIPFAFLTNNSTKTPEMYREKLLKMGID 60 (263)
T ss_dssp TEECTTHHHHHHHHHHHTCCEEEEESCCSSCHHHHHHHHHTTTCC
T ss_pred CEeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHCCCC
Confidence 33447899999999999999999999997766666665 5775
|
| >1zjj_A Hypothetical protein PH1952; alpha/beta hydrolase fold, HAD superfamily, structural genom riken structural genomics/proteomics initiative; 1.85A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=83.00 E-value=3.7 Score=38.23 Aligned_cols=87 Identities=14% Similarity=0.106 Sum_probs=51.7
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCCHHHH-------------HHHHHHcCCCCCCCceeechhhhcCCCCCCCccee
Q 044020 444 DPVRPGVKEAVQTCLEAGITVRMVTGDNINTA-------------RAIAKECGILTSDGEAVEGPEFRNMSPADIIPKLQ 510 (563)
Q Consensus 444 d~~~~~~~~~I~~l~~~gi~v~i~TGd~~~~a-------------~~~a~~lgi~~~~~~~~~g~~~~~~~~~~~~~~~~ 510 (563)
..+.+++.++++.|+ +|+++ ++|..+.... ..+...++-.. .
T Consensus 129 ~~~~~~~~~~l~~L~-~g~~~-i~tn~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~-----------------------~ 183 (263)
T 1zjj_A 129 DLTYEKLKYATLAIR-NGATF-IGTNPDATLPGEEGIYPGAGSIIAALKVATNVEP-----------------------I 183 (263)
T ss_dssp TCBHHHHHHHHHHHH-TTCEE-EESCCCSEEEETTEEEECHHHHHHHHHHHHCCCC-----------------------E
T ss_pred CCCHHHHHHHHHHHH-CCCEE-EEECCCccccCCCCCcCCcHHHHHHHHHHhCCCc-----------------------c
Confidence 346679999999999 89998 7786543111 11111122111 0
Q ss_pred EEEecChhhHHHHHHHHHHhcCCEEEEEcCCc-cCHHHHhhCCce-Eeec
Q 044020 511 VMARSLPSDKHTLVTQLRNTFGEVVAVTGDGT-NDASALHEADIG-LAMG 558 (563)
Q Consensus 511 v~~~~~p~~K~~~v~~l~~~~g~~v~~iGDg~-ND~~~l~~a~vg-iamg 558 (563)
......|.--..+++. -. .+.++||||+. +|+.+-+.+|+. |.+.
T Consensus 184 ~~~KP~~~~~~~~~~~--~~-~~~~~~VGD~~~~Di~~A~~aG~~~i~v~ 230 (263)
T 1zjj_A 184 IIGKPNEPMYEVVREM--FP-GEELWMVGDRLDTDIAFAKKFGMKAIMVL 230 (263)
T ss_dssp ECSTTSHHHHHHHHHH--ST-TCEEEEEESCTTTHHHHHHHTTCEEEEES
T ss_pred EecCCCHHHHHHHHHh--CC-cccEEEECCChHHHHHHHHHcCCeEEEEC
Confidence 1122223322233333 23 68999999995 999999999984 5554
|
| >3n28_A Phosphoserine phosphatase; HAD family hydrolase, structural genomics, PSI, protein STRU initiative, nysgrc; 2.30A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=82.30 E-value=1.1 Score=43.83 Aligned_cols=49 Identities=12% Similarity=0.089 Sum_probs=42.9
Q ss_pred EEecccCCCCcchHHHHHHHH-hC----------CCeEEEEcCCCHHHHHHHHHHcCCCC
Q 044020 438 AVVGIKDPVRPGVKEAVQTCL-EA----------GITVRMVTGDNINTARAIAKECGILT 486 (563)
Q Consensus 438 G~i~~~d~~~~~~~~~I~~l~-~~----------gi~v~i~TGd~~~~a~~~a~~lgi~~ 486 (563)
|++.+..++.+...+++.++. .. |+.++++|||+......+++++|++.
T Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~atGr~~~~l~~~~~~~gld~ 95 (335)
T 3n28_A 36 SWIVFGHYLTPAQFEDMDFFTNRFNAILDMWKVGRYEVALMDGELTSEHETILKALELDY 95 (335)
T ss_dssp CEEEEESCCCHHHHHHHHHHHTSCCCEEEEEEETTEEEEEESSCCCHHHHHHHHHHTCEE
T ss_pred eEEEECCCCCHHHHHHHHHHhcccccchheeecccceEEEecCCchHHHHHHHHHcCCCE
Confidence 455667889999999999998 33 89999999999999999999999875
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 563 | ||||
| d1q3ia_ | 214 | d.220.1.1 (A:) Sodium/potassium-transporting ATPas | 1e-35 | |
| d1qyia_ | 380 | c.108.1.13 (A:) Hypothetical protein MW1667 (SA154 | 8e-32 | |
| d1wpga3 | 239 | d.220.1.1 (A:361-599) Calcium ATPase {Rabbit (Oryc | 6e-23 | |
| d1wpga2 | 168 | c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, ca | 2e-21 | |
| d1wpga4 | 472 | f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATP | 3e-17 | |
| d2b8ea1 | 135 | c.108.1.7 (A:416-434,A:548-663) Cation-transportin | 1e-13 | |
| d1wpga1 | 115 | b.82.7.1 (A:125-239) Calcium ATPase, transduction | 2e-12 | |
| d2feaa1 | 226 | c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthio | 5e-09 | |
| d1nnla_ | 217 | c.108.1.4 (A:) Phosphoserine phosphatase {Human (H | 5e-08 |
| >d1q3ia_ d.220.1.1 (A:) Sodium/potassium-transporting ATPase alpha chain {Pig (Sus scrofa) [TaxId: 9823]} Length = 214 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Sodium/potassium-transporting ATPase alpha chain species: Pig (Sus scrofa) [TaxId: 9823]
Score = 131 bits (329), Expect = 1e-35
Identities = 35/212 (16%), Positives = 60/212 (28%), Gaps = 16/212 (7%)
Query: 252 MVVDKIWIANTISNVEGNNRKDILQSEISERVLDITLQAIFQNTGSKVVKDKDG----KN 307
M V +W N I + + + + + ++ K
Sbjct: 2 MTVAHMWFDNQIHEADTTEDQSGATFDKRSPTWTALSRIAGLCNRAVFKAGQENISVSKR 61
Query: 308 SILGTPTESAILEFGLRLGGDFEAQRREFKIVKVEPFNSVRKKMSVLIALP--AGGMRAF 365
G +ESA+L+ G R V FNS K +
Sbjct: 62 DTAGDASESALLKCIELSCGSVRKMRDRNPKVAEISFNSTNKYQLSIHEREDNPQSHVLV 121
Query: 366 CKGASEIVLSMCDKVVSDNGEPVPLSEEQFRNITDVINGFASEALRTLCLAFKDL----- 420
KGA E +L C + G+ +PL +E + R L +L
Sbjct: 122 MKGAPERILDRCSS-ILVQGKEIPLDKEMQDAFQNAYLELGGLGERVLGFCQLNLPSGKF 180
Query: 421 ----NDSSNENNIPDSGYTLIAVVGIKDPVRP 448
++E N P + ++ + D
Sbjct: 181 PRGFKFDTDELNFPTEKLCFVGLMSMIDHHHH 212
|
| >d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]} Length = 380 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein MW1667 (SA1546) domain: Hypothetical protein MW1667 (SA1546) species: Staphylococcus aureus [TaxId: 1280]
Score = 124 bits (312), Expect = 8e-32
Identities = 40/361 (11%), Positives = 83/361 (22%), Gaps = 57/361 (15%)
Query: 223 LVRHLSACETMGSASCICTDKTRMLTTNHMVVDKIWIANTISNVEG---NNRKDILQSEI 279
+ L +G S I + + ++ ++ N+ D+L
Sbjct: 26 VYELLMDKCYLGLHSHIDWETLTDNDIQDIRNRIFQKDKILNKLKSLGLNSNWDMLFIVF 85
Query: 280 SERVLDITLQAIFQNTGSKVVKDKDGKNSILGTPTESAILEFGLRLGGDFEAQRREFKIV 339
S ++DI L A + + +
Sbjct: 86 SIHLIDIL--------------------KKLSHDEIEAFMYQDEPVELKLQNISTNLADC 125
Query: 340 KVEPFNSVRKKMSVLIALPAGGMRAFCKGASEIVLSMCDKVVSDNGEPVPLSEEQFRNIT 399
+ + + A + A+ + +S+ ++
Sbjct: 126 FNLNEQLPLQFLDNVKVGKNNIYAALEEFATTE---------------LHVSDATLFSLK 170
Query: 400 DVINGFASEALRTLCLAFKDLNDSSNENNIPDSGYTLIAVVGIKDPVRPGVKEAVQTCLE 459
+ A E + L K D + I I VK +
Sbjct: 171 GALWTLAQEVYQEWYLGSKLYEDVEKKIARTTFKTGYIYQEIIL-RPVDEVKVLLNDLKG 229
Query: 460 AGITVRMVTGDNINTARAIAKECGIL-------------TSDGEAVEGPEFRNMSP-ADI 505
AG + + TG + G+L + E + P
Sbjct: 230 AGFELGIATGRPYTETVVPFENLGLLPYFEADFIATASDVLEAENMYPQARPLGKPNPFS 289
Query: 506 IPKLQVMARSLPSDKHTLVTQLRNTFGEVVAVTGDGTNDASALHEAD---IGLAMGIAGT 562
+ + + V + GD D + + IG G+ G
Sbjct: 290 YIAALYGNNRDKYESYINKQDNIVN-KDDVFIVGDSLADLLSAQKIGATFIGTLTGLKGK 348
Query: 563 E 563
+
Sbjct: 349 D 349
|
| >d1wpga3 d.220.1.1 (A:361-599) Calcium ATPase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 239 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Calcium ATPase species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 95.7 bits (237), Expect = 6e-23
Identities = 45/239 (18%), Positives = 78/239 (32%), Gaps = 45/239 (18%)
Query: 248 TTNHMVVDKIWIANTIS----NVEGN---------NRKDILQSEISERVLDITLQAIFQN 294
+ M + + S ++ G+ ++S + ++++ N
Sbjct: 2 SVCKMFIIDKVDGDFCSLNEFSITGSTYAPEGEVLKNDKPIRSGQFDGLVELATICALCN 61
Query: 295 TGSKVVKDKDGKNSILGTPTESAILEFGLRLGGDFEA----------------QRREFKI 338
S + G +G TE+A+ ++ R+ K
Sbjct: 62 DSSLDFNETKGVYEKVGEATETALTTLVEKMNVFNTEVRNLSKVERANACNSVIRQLMKK 121
Query: 339 VKVEPFNSVRKKMSVLIALPAGGM-----RAFCKGASEIVLSMCDKVVSDNGEPVPLSEE 393
F+ RK MSV + + F KGA E V+ C+ V VP++
Sbjct: 122 EFTLEFSRDRKSMSVYCSPAKSSRAAVGNKMFVKGAPEGVIDRCNY-VRVGTTRVPMTGP 180
Query: 394 QFRNITDVIN--GFASEALRTLCLAFKDLNDSSNENNIPD--------SGYTLIAVVGI 442
I VI G + LR L LA +D E + D + T + VVG+
Sbjct: 181 VKEKILSVIKEWGTGRDTLRCLALATRDTPPKREEMVLDDSSRFMEYETDLTFVGVVGM 239
|
| >d1wpga2 c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, catalytic domain P {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 168 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Calcium ATPase, catalytic domain P species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 89.5 bits (221), Expect = 2e-21
Identities = 46/135 (34%), Positives = 64/135 (47%), Gaps = 7/135 (5%)
Query: 435 TLIAVVGIKDPVRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAKECGILTSDGEA--- 491
T DP R V ++Q C +AGI V M+TGDN TA AI + GI + E
Sbjct: 10 TGTLTTNQLDPPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGIFGENEEVADR 69
Query: 492 -VEGPEFRNMSPADIIPKLQVMARSLPSDKHTLVTQLRNTFG--EVVAVTGDGTNDASAL 548
G EF ++ A+ + + + E+ A+TGDG NDA AL
Sbjct: 70 AYTGREFDDLPLAEQREACRRACCFARVEPSHKSKIVEYLQSYDEITAMTGDGVNDAPAL 129
Query: 549 HEADIGLAMGIAGTE 563
+A+IG+AMG +GT
Sbjct: 130 KKAEIGIAMG-SGTA 143
|
| >d1wpga4 f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATPase, transmembrane domain M {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 472 | Back information, alignment and structure |
|---|
class: Membrane and cell surface proteins and peptides fold: Calcium ATPase, transmembrane domain M superfamily: Calcium ATPase, transmembrane domain M family: Calcium ATPase, transmembrane domain M domain: Calcium ATPase, transmembrane domain M species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 82.0 bits (202), Expect = 3e-17
Identities = 37/137 (27%), Positives = 62/137 (45%), Gaps = 10/137 (7%)
Query: 127 EDETPLQVKLNGVATIIGKIELFFSVLEFLVLIGRFLGEKVIHNEFTDWSSADALTLIDY 186
+D+TPLQ KL+ + K+ V +L+ IG F + I Y
Sbjct: 129 QDKTPLQQKLDEFGEQLSKVISLICVAVWLINIGHFND--------PVHGGSWIRGAIYY 180
Query: 187 FAVVVTIIDVAVPEGLPLAVTLSLAFAMKKLMNDGALVRHLSACETMGSASCICTDK--T 244
F + V + A+PEGLP +T LA +++ A+VR L + ET+G A +
Sbjct: 181 FKIAVALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGRAIYNNMKQFIR 240
Query: 245 RMLTTNHMVVDKIWIAN 261
++++N V I++
Sbjct: 241 YLISSNVGEVVCIFLTA 257
|
| >d2b8ea1 c.108.1.7 (A:416-434,A:548-663) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Length = 135 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Cation-transporting ATPase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Score = 65.9 bits (160), Expect = 1e-13
Identities = 43/126 (34%), Positives = 56/126 (44%), Gaps = 26/126 (20%)
Query: 435 TLIAVVGIKDPVRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAKECGILTSDGEAVEG 494
T G D ++ K AVQ GI V M+TGDN +A AI++E
Sbjct: 11 TGTLTKGKPDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISREL------------ 58
Query: 495 PEFRNMSPADIIPKLQVMARSLPSDKHTLVTQLRNTFGEVVAVTGDGTNDASALHEADIG 554
V+A LP K V +L+ EVVA GDG NDA AL +AD+G
Sbjct: 59 ------------NLDLVIAEVLPHQKSEEVKKLQA--KEVVAFVGDGINDAPALAQADLG 104
Query: 555 LAMGIA 560
+A+G
Sbjct: 105 IAVGSG 110
|
| >d1wpga1 b.82.7.1 (A:125-239) Calcium ATPase, transduction domain A {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 115 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Double-stranded beta-helix superfamily: Calcium ATPase, transduction domain A family: Calcium ATPase, transduction domain A domain: Calcium ATPase, transduction domain A species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 62.0 bits (150), Expect = 2e-12
Identities = 33/112 (29%), Positives = 57/112 (50%), Gaps = 16/112 (14%)
Query: 27 QVTRDGQR--QKVCTYDLVVGDIVHLSIGDQVPAYGIFISGH--SLLIDESSLSGQSEPR 82
+V R ++ Q++ D+V GDIV +++GD+VPA +S +L +D+S L+G+S
Sbjct: 4 KVYRADRKSVQRIKARDIVPGDIVEVAVGDKVPADIRILSIKSTTLRVDQSILTGESVSV 63
Query: 83 YMYEE------------NPFLLAGTKVQGGSGKMLVTTVGMRTEWGKLMETL 122
+ E L +GT + G +V T G+ TE GK+ + +
Sbjct: 64 IKHTEPVPDPRAVNQDKKNMLFSGTNIAAGKALGIVATTGVSTEIGKIRDQM 115
|
| >d2feaa1 c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX {Bacillus subtilis [TaxId: 1423]} Length = 226 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: MtnX-like domain: 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX species: Bacillus subtilis [TaxId: 1423]
Score = 54.6 bits (130), Expect = 5e-09
Identities = 15/119 (12%), Positives = 35/119 (29%), Gaps = 1/119 (0%)
Query: 445 PVRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAKECGILTSDGEAVEGPEFRNMSPAD 504
+R G +E V E I +++G + + + +
Sbjct: 75 KIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLEGIVEKDRIYCNHASFDNDYIHIDW 134
Query: 505 IIPKLQVMARSLPSDKHTLVTQLRNTFGEVVAVTGDGTNDASALHEADIGLAMGIAGTE 563
+ K +++ + + + + + GD D A +D+ A E
Sbjct: 135 PHSCKGTCSNQCGCCKPSVIHE-LSEPNQYIIMIGDSVTDVEAAKLSDLCFARDYLLNE 192
|
| >d1nnla_ c.108.1.4 (A:) Phosphoserine phosphatase {Human (Homo sapiens) [TaxId: 9606]} Length = 217 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Human (Homo sapiens) [TaxId: 9606]
Score = 51.5 bits (122), Expect = 5e-08
Identities = 21/126 (16%), Positives = 43/126 (34%), Gaps = 4/126 (3%)
Query: 434 YTLIAVVGIKDPVRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAKECGILTSDGEAVE 493
+ + PG++E V E + V +++G + +A + I V
Sbjct: 71 QVQRLIAEQPPHLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNI---PATNVF 127
Query: 494 GPEFRNMSPADIIPKLQVMARSLPSDKHTLVTQLRNTFG-EVVAVTGDGTNDASALHEAD 552
+ + + + K ++ L+ F + + + GDG D A AD
Sbjct: 128 ANRLKFYFNGEYAGFDETQPTAESGGKGKVIKLLKEKFHFKKIIMIGDGATDMEACPPAD 187
Query: 553 IGLAMG 558
+ G
Sbjct: 188 AFIGFG 193
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 563 | |||
| d1q3ia_ | 214 | Sodium/potassium-transporting ATPase alpha chain { | 99.95 | |
| d1wpga1 | 115 | Calcium ATPase, transduction domain A {Rabbit (Ory | 99.92 | |
| d1wpga2 | 168 | Calcium ATPase, catalytic domain P {Rabbit (Orycto | 99.9 | |
| d2b8ea1 | 135 | Cation-transporting ATPase {Archaeon Archaeoglobus | 99.88 | |
| d1qyia_ | 380 | Hypothetical protein MW1667 (SA1546) {Staphylococc | 99.87 | |
| d1wpga3 | 239 | Calcium ATPase {Rabbit (Oryctolagus cuniculus) [Ta | 99.84 | |
| d1xvia_ | 232 | Putative mannosyl-3-phosphoglycerate phosphatase M | 99.19 | |
| d1wzca1 | 243 | Putative mannosyl-3-phosphoglycerate phosphatase M | 99.18 | |
| d1rkqa_ | 271 | Hypothetical protein YidA {Escherichia coli [TaxId | 99.17 | |
| d1wr8a_ | 230 | Phosphoglycolate phosphatase, PGPase {Pyrococcus h | 99.15 | |
| d1nrwa_ | 285 | Hypothetical protein YwpJ {Bacillus subtilis [TaxI | 99.14 | |
| d1l6ra_ | 225 | Phosphoglycolate phosphatase, PGPase {Archaeon The | 99.11 | |
| d1rlma_ | 269 | Sugar phosphatase SupH (YbiV) {Escherichia coli [T | 99.09 | |
| d1nnla_ | 217 | Phosphoserine phosphatase {Human (Homo sapiens) [T | 99.02 | |
| d1k1ea_ | 177 | Probable phosphatase YrbI {Haemophilus influenzae, | 99.02 | |
| d2rbka1 | 260 | Sugar-phosphate phosphatase BT4131 {Bacteroides th | 98.98 | |
| d2b30a1 | 283 | PFL1270w orthologue {Plasmodium vivax [TaxId: 5855 | 98.95 | |
| d1nf2a_ | 267 | Hypothetical protein TM0651 {Thermotoga maritima [ | 98.92 | |
| d1s2oa1 | 244 | Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc | 98.85 | |
| d2feaa1 | 226 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 98.78 | |
| d1wpga4 | 472 | Calcium ATPase, transmembrane domain M {Rabbit (Or | 98.78 | |
| d1rkua_ | 206 | Homoserine kinase ThrH {Pseudomonas aeruginosa [Ta | 98.68 | |
| d1u02a_ | 229 | Trehalose-6-phosphate phosphatase related protein | 98.47 | |
| d1j97a_ | 210 | Phosphoserine phosphatase {Archaeon Methanococcus | 98.42 | |
| d2fuea1 | 244 | Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: | 98.42 | |
| d2amya1 | 243 | Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: | 98.07 | |
| d1te2a_ | 218 | Phosphatase YniC {Escherichia coli [TaxId: 562]} | 98.02 | |
| d2go7a1 | 204 | Hypothetical protein SP2064 {Streptococcus pneumon | 97.76 | |
| d1swva_ | 257 | Phosphonoacetaldehyde hydrolase {Bacillus cereus [ | 97.75 | |
| d2hsza1 | 224 | Phosphoglycolate phosphatase Gph {Haemophilus somn | 97.74 | |
| d2hcfa1 | 228 | Hypothetical protein CT1708 {Chlorobium tepidum [T | 97.69 | |
| d2bdua1 | 291 | Cytosolic 5'-nucleotidase III {Mouse (Mus musculus | 97.49 | |
| d1u7pa_ | 164 | Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mu | 97.47 | |
| d1ltqa1 | 149 | Polynucleotide kinase, phosphatase domain {Bacteri | 97.36 | |
| d2hdoa1 | 207 | Phosphoglycolate phosphatase {Lactobacillus planta | 97.33 | |
| d1zs9a1 | 253 | E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} | 97.32 | |
| d2ah5a1 | 210 | predicted phosphatase SP0104 {Streptococcus pneumo | 97.23 | |
| d1o08a_ | 221 | beta-Phosphoglucomutase {Lactococcus lactis [TaxId | 97.16 | |
| d1x42a1 | 230 | Hypothetical protein PH0459 {Archaeon Pyrococcus h | 97.15 | |
| d2fi1a1 | 187 | Putative hydrolase SP0805 {Streptococcus pneumonia | 97.09 | |
| d1yv9a1 | 253 | Putative hydrolase EF1188 {Enterococcus faecalis [ | 96.97 | |
| d2gfha1 | 247 | N-acylneuraminate-9-phosphatase NANP {Mouse (Mus m | 96.85 | |
| d2a29a1 | 136 | Potassium-transporting ATPase B chain, KdpB {Esche | 96.67 | |
| d2b82a1 | 209 | Class B acid phosphatase, AphA {Escherichia coli [ | 96.64 | |
| d2c4na1 | 250 | NagD {Escherichia coli [TaxId: 562]} | 96.56 | |
| d2o2xa1 | 209 | Hypothetical protein Mll2559 {Mesorhizobium loti [ | 96.54 | |
| d1zrna_ | 220 | L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., s | 96.51 | |
| d2gmwa1 | 182 | D,D-heptose 1,7-bisphosphate phosphatase GmhB {Esc | 96.51 | |
| d1cr6a1 | 222 | Epoxide hydrolase, N-terminal domain {Mouse (Mus m | 96.39 | |
| d1vjra_ | 261 | Hypothetical protein TM1742 {Thermotoga maritima [ | 96.21 | |
| d2fpwa1 | 161 | Histidine biosynthesis bifunctional protein HisB, | 96.12 | |
| d1wvia_ | 253 | Putative phosphatase SMU.1415c {Streptococcus muta | 95.57 | |
| d1zd3a1 | 225 | Epoxide hydrolase, N-terminal domain {Human (Homo | 95.52 | |
| d1qq5a_ | 245 | L-2-Haloacid dehalogenase, HAD {Xanthobacter autot | 95.33 | |
| d2fdra1 | 222 | Hypothetical protein Atu0790 {Agrobacterium tumefa | 94.79 | |
| d2b0ca1 | 197 | Putative phosphatase YihX {Escherichia coli [TaxId | 94.49 | |
| d2obba1 | 122 | Hypothetical protein BT0820 {Bacteroides thetaiota | 86.99 | |
| d2b8ea2 | 113 | Cation-transporting ATPase {Archaeon Archaeoglobus | 84.64 | |
| d1y8aa1 | 308 | Hypothetical protein AF1437 {Archaeon Archaeoglobu | 83.07 |
| >d1q3ia_ d.220.1.1 (A:) Sodium/potassium-transporting ATPase alpha chain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Sodium/potassium-transporting ATPase alpha chain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=99.95 E-value=1e-27 Score=222.35 Aligned_cols=197 Identities=18% Similarity=0.208 Sum_probs=150.9
Q ss_pred eEEEEEEEcCeeeeecCCCccccccccccHHHHHHHHHHHHhccCCceeecCCC----CceecCCccHHHHHHHHHHcCC
Q 044020 252 MVVDKIWIANTISNVEGNNRKDILQSEISERVLDITLQAIFQNTGSKVVKDKDG----KNSILGTPTESAILEFGLRLGG 327 (563)
Q Consensus 252 ~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~e~al~~~~~~~~~ 327 (563)
|+|+++|.++..+...................+..+..+...|+.+.+..+..+ .....|+|+|.||+.++.+.+.
T Consensus 2 MTV~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~lcn~a~~~~~~~~~~~~~~~~~GdptE~ALl~~a~~~~~ 81 (214)
T d1q3ia_ 2 MTVAHMWFDNQIHEADTTEDQSGATFDKRSPTWTALSRIAGLCNRAVFKAGQENISVSKRDTAGDASESALLKCIELSCG 81 (214)
T ss_dssp CEEEEEEETTEEEECCCC------CCCCCSHHHHHHHHHHHHSCCCCCC----------CCCCSCHHHHHHHHHHHHHHS
T ss_pred eEEEEEEECCEEEEcCCCCcCCCcccccCCHHHHHHHHHHHHhCCCccccCCCCCcccccccccChHHHHHHHHHHHhCC
Confidence 789999999998765544333322222344555556666666666655433222 3356899999999999999999
Q ss_pred ChHHHhhhceEEEEecCCCCceeEEEEEEcC--CCeEEEEEeCChhHHHhcccccccCCCccccCCHHHHHHHHHHHHHH
Q 044020 328 DFEAQRREFKIVKVEPFNSVRKKMSVLIALP--AGGMRAFCKGASEIVLSMCDKVVSDNGEPVPLSEEQFRNITDVINGF 405 (563)
Q Consensus 328 ~~~~~~~~~~~~~~~~f~~~~~~~sviv~~~--~~~~~~~~kG~~~~il~~c~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 405 (563)
+....+..++++..+||+|.||+|+++++.+ ++.+++|+||+||.|+++|+.++. +|...+++++.++.+.+.++.|
T Consensus 82 ~~~~~r~~~~~v~~~pF~S~rK~ms~v~~~~~~~~~~~~~~KGApe~Il~~C~~~~~-~g~~~~l~~~~~~~i~~~~~~~ 160 (214)
T d1q3ia_ 82 SVRKMRDRNPKVAEISFNSTNKYQLSIHEREDNPQSHVLVMKGAPERILDRCSSILV-QGKEIPLDKEMQDAFQNAYLEL 160 (214)
T ss_dssp CHHHHHHTSCEEEEEC------CEEEEEECSSCTTSEEEEEEECHHHHHHTEEEEEE-TTEEEECCHHHHHHHHHHHHHH
T ss_pred CHHHHHhhCcEeeeEeeCCCCCEEEEEEEccCCCCceeEEecCCHHHHHHhhhheee-CCceeechHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999875 356899999999999999998875 6889999999999999999999
Q ss_pred HHHHHhHhHhhhhccCCCCC---------CCCCCCCCceEEEEecccCCCCcc
Q 044020 406 ASEALRTLCLAFKDLNDSSN---------ENNIPDSGYTLIAVVGIKDPVRPG 449 (563)
Q Consensus 406 ~~~G~r~i~~a~~~l~~~~~---------~~~~~~~~~~~lG~i~~~d~~~~~ 449 (563)
+++|+||+|+|||.++.++. +.+..+.+|+|+|++++.||||++
T Consensus 161 a~~GlRvLa~A~k~l~~~~~~~~~~~~~~~~~~~e~~L~flGlvgi~DPPR~~ 213 (214)
T d1q3ia_ 161 GGLGERVLGFCQLNLPSGKFPRGFKFDTDELNFPTEKLCFVGLMSMIDHHHHH 213 (214)
T ss_dssp HHTTCEEEEEEEEEECTTTSCTTCCCCTTTTSSCCSSEEEEEEEEEESCCSCC
T ss_pred hhCCcEEEEEEEEecCccccccccccChhhhhhhcCCCEEEEEEEEEeCCCCC
Confidence 99999999999999986542 234668899999999999999975
|
| >d1wpga1 b.82.7.1 (A:125-239) Calcium ATPase, transduction domain A {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Double-stranded beta-helix superfamily: Calcium ATPase, transduction domain A family: Calcium ATPase, transduction domain A domain: Calcium ATPase, transduction domain A species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=99.92 E-value=3.8e-26 Score=186.37 Aligned_cols=98 Identities=33% Similarity=0.511 Sum_probs=88.7
Q ss_pred eeEEEECCEE--EEeecCCcccCcEEEeCCCCeeeceEEEEeeC--ceEEEeccCcCCCCcccccC------------CC
Q 044020 25 FIQVTRDGQR--QKVCTYDLVVGDIVHLSIGDQVPAYGIFISGH--SLLIDESSLSGQSEPRYMYE------------EN 88 (563)
Q Consensus 25 ~~~V~r~g~~--~~i~~~~L~~GDiI~v~~G~~iPaD~~ll~g~--~l~Vdes~lTGes~p~~k~~------------~~ 88 (563)
.++|+|+|++ ++|++++|+|||||.|++|++|||||+|+.+. .+.||||+|||||.|+.|.. ..
T Consensus 2 ~~kV~R~g~~~v~~I~~~eLv~GDiv~l~~G~~vPaD~~ll~~~~~~l~vdes~lTGEs~pv~K~~~~~~~~~~~~~~~~ 81 (115)
T d1wpga1 2 MGKVYRADRKSVQRIKARDIVPGDIVEVAVGDKVPADIRILSIKSTTLRVDQSILTGESVSVIKHTEPVPDPRAVNQDKK 81 (115)
T ss_dssp EEEEEBSSCSSCEEEEGGGCCTTCEEEEETTCBCCSEEEEEEECSSCCEEECHHHHSCCSCEECCCSCCCCTTCCGGGCT
T ss_pred ceEEEECCCceEEEEeHHHCCCCCEEEECCCCEEeeceEEEEeeccceEEEEeecccceEEEEeeccccccccccccccc
Confidence 5789999985 78999999999999999999999999999744 47899999999999998862 35
Q ss_pred CeEEecceeecCcEEEEEEEEcccchhHHHHHHh
Q 044020 89 PFLLAGTKVQGGSGKMLVTTVGMRTEWGKLMETL 122 (563)
Q Consensus 89 ~~i~~Gt~v~~g~~~~~V~~tg~~t~~~~i~~~~ 122 (563)
+++|+||.+.+|+++++|++||.+|.+|+|.+.+
T Consensus 82 n~lf~GT~V~~G~~~~~V~~tG~~T~~G~i~~~i 115 (115)
T d1wpga1 82 NMLFSGTNIAAGKALGIVATTGVSTEIGKIRDQM 115 (115)
T ss_dssp TEECTTCEEEECEEEEEEEECGGGSHHHHHHHHH
T ss_pred ceEEeccEEEeeeEEEEEEEEccccHHHHHHHhC
Confidence 6899999999999999999999999999998753
|
| >d1wpga2 c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, catalytic domain P {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Calcium ATPase, catalytic domain P species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=99.90 E-value=1.8e-24 Score=190.62 Aligned_cols=119 Identities=45% Similarity=0.659 Sum_probs=106.3
Q ss_pred ccCCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCc----eeechhhhcCCCC---CCCcceeEEEe
Q 044020 442 IKDPVRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAKECGILTSDGE----AVEGPEFRNMSPA---DIIPKLQVMAR 514 (563)
Q Consensus 442 ~~d~~~~~~~~~I~~l~~~gi~v~i~TGd~~~~a~~~a~~lgi~~~~~~----~~~g~~~~~~~~~---~~~~~~~v~~~ 514 (563)
+-||+|++++++|+.|+++||+|+|+|||+..+|..+|+++||...+.. .+.|.++..+... +...+..+|+|
T Consensus 17 ~~Dp~R~~~~~~I~~l~~~GI~v~miTGD~~~tA~~ia~~~Gi~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar 96 (168)
T d1wpga2 17 QLDPPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGIFGENEEVADRAYTGREFDDLPLAEQREACRRACCFAR 96 (168)
T ss_dssp CECCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTSSCTTCCCTTTEEEHHHHHHSCHHHHHHHHHHCCEEES
T ss_pred ecCCCchhHHHHHHHHHHCcCEEEEECCCCHHHHHHHHHHcCCCCCccccccccccccccchhhHHHHhhhhhhhhhhhc
Confidence 3499999999999999999999999999999999999999999776543 4677777665543 45667789999
Q ss_pred cChhhHHHHHHHHHHhcCCEEEEEcCCccCHHHHhhCCceEeecCCCC
Q 044020 515 SLPSDKHTLVTQLRNTFGEVVAVTGDGTNDASALHEADIGLAMGIAGT 562 (563)
Q Consensus 515 ~~p~~K~~~v~~l~~~~g~~v~~iGDg~ND~~~l~~a~vgiamg~~~~ 562 (563)
++|++|..+++.|++. |+.|+|+|||.||++||++||+||+|+ +|+
T Consensus 97 ~~p~~K~~lv~~l~~~-g~~Va~vGDG~nD~~AL~~AdvGIa~~-~gt 142 (168)
T d1wpga2 97 VEPSHKSKIVEYLQSY-DEITAMTGDGVNDAPALKKAEIGIAMG-SGT 142 (168)
T ss_dssp CCHHHHHHHHHHHHHT-TCCEEEEECSGGGHHHHHHSSEEEEET-TSC
T ss_pred cchhHHHHHHHHHHhc-ccceeEEecCCCCHHHHHhCCEEEEec-ccc
Confidence 9999999999999998 999999999999999999999999999 775
|
| >d2b8ea1 c.108.1.7 (A:416-434,A:548-663) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Cation-transporting ATPase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=99.88 E-value=4.1e-23 Score=174.38 Aligned_cols=101 Identities=44% Similarity=0.605 Sum_probs=94.5
Q ss_pred eEEEEecccCCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCceeechhhhcCCCCCCCcceeEEEe
Q 044020 435 TLIAVVGIKDPVRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAKECGILTSDGEAVEGPEFRNMSPADIIPKLQVMAR 514 (563)
Q Consensus 435 ~~lG~i~~~d~~~~~~~~~I~~l~~~gi~v~i~TGd~~~~a~~~a~~lgi~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~ 514 (563)
+..++++++|++|++++++|+.|+++|++++|+|||+..++..+|++|||.. +|++
T Consensus 11 ~~~~~~g~~D~lr~~a~~~I~~L~~~Gi~v~ilTGD~~~~a~~ia~~lgI~~------------------------v~~~ 66 (135)
T d2b8ea1 11 TGTLTKGKPDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLDL------------------------VIAE 66 (135)
T ss_dssp CCCCBCSCCCCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCSE------------------------EECS
T ss_pred ceEEEEecCCCCCccHHHHHHHHHHcCCEEEEEcCcchhhhhHHHhhhhhhh------------------------hccc
Confidence 4456789999999999999999999999999999999999999999999986 9999
Q ss_pred cChhhHHHHHHHHHHhcCCEEEEEcCCccCHHHHhhCCceEeecCCCC
Q 044020 515 SLPSDKHTLVTQLRNTFGEVVAVTGDGTNDASALHEADIGLAMGIAGT 562 (563)
Q Consensus 515 ~~p~~K~~~v~~l~~~~g~~v~~iGDg~ND~~~l~~a~vgiamg~~~~ 562 (563)
++|++|..+++.+|. ++.|+|+|||.||.+||++||+||||+ +++
T Consensus 67 ~~p~~k~~~v~~~q~--~~~v~~vGDg~nD~~aL~~Advgia~~-~~~ 111 (135)
T d2b8ea1 67 VLPHQKSEEVKKLQA--KEVVAFVGDGINDAPALAQADLGIAVG-SGS 111 (135)
T ss_dssp CCHHHHHHHHHHHTT--TSCEEEEECSSSSHHHHHHSSEEEEEC-CC-
T ss_pred cchhHHHHHHHHHHc--CCEEEEEeCCCCcHHHHHhCCeeeecC-ccC
Confidence 999999999999986 569999999999999999999999999 765
|
| >d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein MW1667 (SA1546) domain: Hypothetical protein MW1667 (SA1546) species: Staphylococcus aureus [TaxId: 1280]
Probab=99.87 E-value=2.4e-27 Score=239.61 Aligned_cols=298 Identities=11% Similarity=0.001 Sum_probs=198.5
Q ss_pred hhhhcCCeeeeecccccccccCceEEEEEEEcCeeeeecCCCccccccccccHHHHHHHHHHHHhccCCceeecCCCCce
Q 044020 229 ACETMGSASCICTDKTRMLTTNHMVVDKIWIANTISNVEGNNRKDILQSEISERVLDITLQAIFQNTGSKVVKDKDGKNS 308 (563)
Q Consensus 229 ~le~l~~v~~i~~DKTGTLT~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (563)
+.|.||...++|+|||||+|.+.|.+..+..+...... .. ...+.+ ..+....++++. ... ..
T Consensus 32 s~e~Lg~~~~i~~~k~~~~t~~~i~~~~~~~~~il~~~------k~--~g~n~~-~dl~~~~~~~~~-~~~-------~~ 94 (380)
T d1qyia_ 32 DKCYLGLHSHIDWETLTDNDIQDIRNRIFQKDKILNKL------KS--LGLNSN-WDMLFIVFSIHL-IDI-------LK 94 (380)
T ss_dssp CTTTTCCSCCCCGGGCCHHHHHHHHHHHHTTTHHHHHH------HH--TTCCCH-HHHHHHHHHHHH-HHH-------HT
T ss_pred chhhcccceeeecCcccchhhhhheeeeecchhhhHhh------hh--cCCChh-HHHHHHHHHHHH-HHH-------Hh
Confidence 45889999999999999999999977543211111000 00 001111 111111111111 100 01
Q ss_pred ecCCccHHHHHHHHHHcCCChHHHhhhceEEEEecCCCCceeEEEEEEcCCCeEEEEEeCChhHHHhcccccccCCCccc
Q 044020 309 ILGTPTESAILEFGLRLGGDFEAQRREFKIVKVEPFNSVRKKMSVLIALPAGGMRAFCKGASEIVLSMCDKVVSDNGEPV 388 (563)
Q Consensus 309 ~~~~~~e~al~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~sviv~~~~~~~~~~~kG~~~~il~~c~~~~~~~~~~~ 388 (563)
..+++.+.+++...+..+......++.+.....+||++.+++|+++....++.+..+.+|+++.+.
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~f~~~~k~~~~~~~~~~~~~~~~~~~a~~~~~-------------- 160 (380)
T d1qyia_ 95 KLSHDEIEAFMYQDEPVELKLQNISTNLADCFNLNEQLPLQFLDNVKVGKNNIYAALEEFATTELH-------------- 160 (380)
T ss_dssp TSCHHHHHHHHHCSSCHHHHHTTSGGGCSSCCCCCTTTTHHHHTTCCSSHHHHHHHHHHHHHHHTT--------------
T ss_pred hcCCCcHHHHHHHHhhccchHHHHHHhccccccCCcchHHHHHhhhcccccchhHhhhhccHhhcC--------------
Confidence 224667777776544333334445567777888999999999987654433333344455554431
Q ss_pred cCCHHHHHHHHHHHHHHHHHHHhHhHhhhhccCCCCCCCCCCCCCceEEEEecccCCCCc--chHHHHHHHHhCCCeEEE
Q 044020 389 PLSEEQFRNITDVINGFASEALRTLCLAFKDLNDSSNENNIPDSGYTLIAVVGIKDPVRP--GVKEAVQTCLEAGITVRM 466 (563)
Q Consensus 389 ~~~~~~~~~i~~~~~~~~~~G~r~i~~a~~~l~~~~~~~~~~~~~~~~lG~i~~~d~~~~--~~~~~I~~l~~~gi~v~i 466 (563)
+++..+..+......++++|+|++++|++..+..+... ..+....|++..+++++| +++++|+.|+++|++++|
T Consensus 161 -~~~~~~~~~~~~~~~~a~~~~r~l~~~~~~~~~~~~~~---~~~~~~~g~i~~~~~i~p~~~v~~~l~~lk~aGi~v~i 236 (380)
T d1qyia_ 161 -VSDATLFSLKGALWTLAQEVYQEWYLGSKLYEDVEKKI---ARTTFKTGYIYQEIILRPVDEVKVLLNDLKGAGFELGI 236 (380)
T ss_dssp -CSCCGGGSTTCHHHHHHHHHHHHHHHHHHHHHHHHCSC---CSCSSCCCTTTTCCBSSCHHHHHHHHHHHHHTTCEEEE
T ss_pred -CcHHHHHHHHhHHHHHHHHHHHHHHHhhhccccccccc---chhhHhcccccccccccchhhHHHHHHHHHHCCCeEEE
Confidence 23333445566778899999999999998765433221 223345688889998665 999999999999999999
Q ss_pred EcCCCHHHHHHHHHHcCCCCCC--CceeechhhhcC----CCC--------CCCcceeEEEecChhhHHHHHHHHHHhcC
Q 044020 467 VTGDNINTARAIAKECGILTSD--GEAVEGPEFRNM----SPA--------DIIPKLQVMARSLPSDKHTLVTQLRNTFG 532 (563)
Q Consensus 467 ~TGd~~~~a~~~a~~lgi~~~~--~~~~~g~~~~~~----~~~--------~~~~~~~v~~~~~p~~K~~~v~~l~~~~g 532 (563)
+|||+..++..+++++|+.... ..++.+.+.... ... ..+.....+++..|.+|..+++.++.. +
T Consensus 237 ~Tg~~~~~a~~il~~lgl~~~F~~~~i~~~~d~~~~~~~~~~~~~~~KP~p~~~~~~~~~~~~~~~~k~~iv~~~~~~-~ 315 (380)
T d1qyia_ 237 ATGRPYTETVVPFENLGLLPYFEADFIATASDVLEAENMYPQARPLGKPNPFSYIAALYGNNRDKYESYINKQDNIVN-K 315 (380)
T ss_dssp ECSSCHHHHHHHHHHHTCGGGSCGGGEECHHHHHHHHHHSTTSCCCCTTSTHHHHHHHHCCCGGGHHHHHHCCTTCSC-T
T ss_pred ECCCCHHHHHHHHHHcCCcccCCcceEEecchhhhhhhhccccccccCCChHHHHHHHHHcCCCHHHHHHHHHHhCCC-C
Confidence 9999999999999999997532 335555543211 000 122334467888999999999999998 9
Q ss_pred CEEEEEcCCccCHHHHhhCC---ceEeecCCCC
Q 044020 533 EVVAVTGDGTNDASALHEAD---IGLAMGIAGT 562 (563)
Q Consensus 533 ~~v~~iGDg~ND~~~l~~a~---vgiamg~~~~ 562 (563)
+.|+|+|||.||++|++.|| +||+||..|+
T Consensus 316 ~~~~~vGD~~~D~~aak~Ag~~~Igv~~G~~g~ 348 (380)
T d1qyia_ 316 DDVFIVGDSLADLLSAQKIGATFIGTLTGLKGK 348 (380)
T ss_dssp TTEEEEESSHHHHHHHHHHTCEEEEESCBTTBG
T ss_pred CeEEEECCCHHHHHHHHHCCCCEEEEecCCCCc
Confidence 99999999999999999999 9999996554
|
| >d1wpga3 d.220.1.1 (A:361-599) Calcium ATPase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Calcium ATPase species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=99.84 E-value=2.6e-21 Score=182.12 Aligned_cols=158 Identities=25% Similarity=0.278 Sum_probs=127.9
Q ss_pred HHHHHHHHHhccCCceeec-CCCCceecCCccHHHHHHHHHHcCCChH----------------HHhhhceEEEEecCCC
Q 044020 284 LDITLQAIFQNTGSKVVKD-KDGKNSILGTPTESAILEFGLRLGGDFE----------------AQRREFKIVKVEPFNS 346 (563)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~e~al~~~~~~~~~~~~----------------~~~~~~~~~~~~~f~~ 346 (563)
+..++.+..+|+.+....+ .++.+...|+|+|.||+.++.+.|.+.. ..+..|+++..+||+|
T Consensus 50 l~~ll~~~~LCn~a~l~~~~~~~~~~~~G~pTE~ALl~~a~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~pF~S 129 (239)
T d1wpga3 50 LVELATICALCNDSSLDFNETKGVYEKVGEATETALTTLVEKMNVFNTEVRNLSKVERANACNSVIRQLMKKEFTLEFSR 129 (239)
T ss_dssp HHHHHHHHHHSCSCEEEEETTTTEEEEESCHHHHHHHHHHHHHCTTCCCCSSSCHHHHTTHHHHHHHHHEEEEEEEEEET
T ss_pred HHHHHHHHHhcCCCEeeecCCCCeEEEcCCCCcHHHHHHHHHhCCChHHhhccchhhhhccchhhhhhhCeEEEEeeecc
Confidence 3444455555666655443 4556678899999999999999887543 2356899999999999
Q ss_pred CceeEEEEEEcCCC-----eEEEEEeCChhHHHhcccccccCCCccccCCHHHHHHHHHHHHHH--HHHHHhHhHhhhhc
Q 044020 347 VRKKMSVLIALPAG-----GMRAFCKGASEIVLSMCDKVVSDNGEPVPLSEEQFRNITDVINGF--ASEALRTLCLAFKD 419 (563)
Q Consensus 347 ~~~~~sviv~~~~~-----~~~~~~kG~~~~il~~c~~~~~~~~~~~~~~~~~~~~i~~~~~~~--~~~G~r~i~~a~~~ 419 (563)
+||+|+++++.+++ .+.+|+||+||.|+++|+.++. ++...+++++.++.+.+.++.+ +++|+||+++|||+
T Consensus 130 ~rK~Msvv~~~~~~~~~~~~~~l~vKGApe~iL~~C~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~a~~glRvLa~A~k~ 208 (239)
T d1wpga3 130 DRKSMSVYCSPAKSSRAAVGNKMFVKGAPEGVIDRCNYVRV-GTTRVPMTGPVKEKILSVIKEWGTGRDTLRCLALATRD 208 (239)
T ss_dssp TTTEEEEEEEESSGGGGGGCSEEEEEECHHHHHHTEEEEEE-TTEEEECCHHHHHHHHHHHHHHTTSSCCCEEEEEEEES
T ss_pred cccEEEEEEEcCCCCcccceeEEEEeCChHHHHHhccceec-CCceeeCCHHHHHHHHHHHHHHhHhhCCCEEEEEEEEE
Confidence 99999999998654 4789999999999999998776 5778899999999999999987 57999999999999
Q ss_pred cCCCCCCC--------CCCCCCceEEEEecc
Q 044020 420 LNDSSNEN--------NIPDSGYTLIAVVGI 442 (563)
Q Consensus 420 l~~~~~~~--------~~~~~~~~~lG~i~~ 442 (563)
++...... ..+|.+|+|+|++++
T Consensus 209 ~~~~~~~~~~~~~~~~~~~E~~L~flGlvgi 239 (239)
T d1wpga3 209 TPPKREEMVLDDSSRFMEYETDLTFVGVVGM 239 (239)
T ss_dssp SCCCGGGCCTTCGGGHHHHTCSEEEEEEEEE
T ss_pred CCcccccccccchhhHHHhcCCCEEEEEECC
Confidence 98765322 245789999999985
|
| >d1xvia_ c.108.1.10 (A:) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Escherichia coli [TaxId: 562]
Probab=99.19 E-value=5.1e-11 Score=110.08 Aligned_cols=43 Identities=12% Similarity=0.037 Sum_probs=40.1
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC
Q 044020 444 DPVRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAKECGILT 486 (563)
Q Consensus 444 d~~~~~~~~~I~~l~~~gi~v~i~TGd~~~~a~~~a~~lgi~~ 486 (563)
..+.+.++++|++|+++|+.++++|||+...+..+.+++++..
T Consensus 20 ~~i~~~~~~al~~l~~~Gi~~~i~TGR~~~~~~~~~~~~~~~~ 62 (232)
T d1xvia_ 20 SYDWQPAAPWLTRLREANVPVILCSSKTSAEMLYLQKTLGLQG 62 (232)
T ss_dssp CCSCCTTHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHTTCTT
T ss_pred CcCCHHHHHHHHHHHHCCCEEEEEeCCChhhchhHHHHhccCC
Confidence 4578899999999999999999999999999999999999865
|
| >d1wzca1 c.108.1.10 (A:1-243) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=99.18 E-value=4.3e-11 Score=111.57 Aligned_cols=44 Identities=11% Similarity=0.064 Sum_probs=40.3
Q ss_pred cCCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC
Q 044020 443 KDPVRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAKECGILT 486 (563)
Q Consensus 443 ~d~~~~~~~~~I~~l~~~gi~v~i~TGd~~~~a~~~a~~lgi~~ 486 (563)
.+...+.++++|++|+++|++++++|||+...+..+.+.+++..
T Consensus 15 ~~~~~~~~~~ai~~l~~~G~~~~~aTGR~~~~~~~~~~~~~~~~ 58 (243)
T d1wzca1 15 PGYEPDPAKPIIEELKDMGFEIIFNSSKTRAEQEYYRKELEVET 58 (243)
T ss_dssp SSSCSGGGHHHHHHHHHTTEEEEEECSSCHHHHHHHHHHHTCCS
T ss_pred CCCCCHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHhcccc
Confidence 45567889999999999999999999999999999999999865
|
| >d1rkqa_ c.108.1.10 (A:) Hypothetical protein YidA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YidA species: Escherichia coli [TaxId: 562]
Probab=99.17 E-value=2.1e-11 Score=116.01 Aligned_cols=46 Identities=22% Similarity=0.334 Sum_probs=41.7
Q ss_pred cCCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCC
Q 044020 443 KDPVRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAKECGILTSD 488 (563)
Q Consensus 443 ~d~~~~~~~~~I~~l~~~gi~v~i~TGd~~~~a~~~a~~lgi~~~~ 488 (563)
..++.+.+.++|++|+++|++++++|||+...+..+.+++++..+.
T Consensus 19 ~~~i~~~~~~al~~L~~~gi~v~i~TGR~~~~~~~~~~~l~l~~~~ 64 (271)
T d1rkqa_ 19 DHTISPAVKNAIAAARARGVNVVLTTGRPYAGVHNYLKELHMEQPG 64 (271)
T ss_dssp TSCCCHHHHHHHHHHHHTTCEEEEECSSCGGGTHHHHHHTTCCSTT
T ss_pred CCccCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHhcCcCCC
Confidence 3458899999999999999999999999999999999999987643
|
| >d1wr8a_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Pyrococcus horikoshii [TaxId: 53953]
Probab=99.15 E-value=5.6e-11 Score=109.66 Aligned_cols=117 Identities=21% Similarity=0.289 Sum_probs=82.4
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCceeechh----------------------hhc-CC
Q 044020 445 PVRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAKECGILTSDGEAVEGPE----------------------FRN-MS 501 (563)
Q Consensus 445 ~~~~~~~~~I~~l~~~gi~v~i~TGd~~~~a~~~a~~lgi~~~~~~~~~g~~----------------------~~~-~~ 501 (563)
.+.+.+.++|++|+++|++|+++|||+...+..+++.+++..+- ..-+|.. +.. ..
T Consensus 19 ~i~~~~~~~l~~l~~~gi~v~~~TGR~~~~~~~~~~~~~~~~~~-i~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (230)
T d1wr8a_ 19 MIHEKALEAIRRAESLGIPIMLVTGNTVQFAEAASILIGTSGPV-VAEDGGAISYKKKRIFLASMDEEWILWNEIRKRFP 97 (230)
T ss_dssp CBCHHHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHHTCCSCE-EEGGGTEEEETTEEEESCCCSHHHHHHHHHHHHCT
T ss_pred ccCHHHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHhcCCCccc-ccccceeeeccccccccccccHHHHHHHHHHHhcc
Confidence 57889999999999999999999999999999999999986420 1111100 000 00
Q ss_pred CC------------------------------CCCcc-------eeEEEecChhhHHHHHHHHHHhcC---CEEEEEcCC
Q 044020 502 PA------------------------------DIIPK-------LQVMARSLPSDKHTLVTQLRNTFG---EVVAVTGDG 541 (563)
Q Consensus 502 ~~------------------------------~~~~~-------~~v~~~~~p~~K~~~v~~l~~~~g---~~v~~iGDg 541 (563)
.. ..... ..+........|...++.+.+++| +.++++||+
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iei~~~~~~K~~al~~l~~~~~i~~~~~~~iGD~ 177 (230)
T d1wr8a_ 98 NARTSYTMPDRRAGLVIMRETINVETVREIINELNLNLVAVDSGFAIHVKKPWINKGSGIEKASEFLGIKPKEVAHVGDG 177 (230)
T ss_dssp TCCBCTTGGGCSSCEEECTTTSCHHHHHHHHHHTTCSCEEEECSSCEEEECTTCCHHHHHHHHHHHHTSCGGGEEEEECS
T ss_pred cccceeecccceeeEEEecccccHHHHHHHHHHhccceEEeeCCcEEEEeeCCcCcchhhcccccccccchhheeeeecC
Confidence 00 00000 011122234578888888877654 689999999
Q ss_pred ccCHHHHhhCCceEeecCCCCC
Q 044020 542 TNDASALHEADIGLAMGIAGTE 563 (563)
Q Consensus 542 ~ND~~~l~~a~vgiamg~~~~~ 563 (563)
.||++||+.||+||||| ||++
T Consensus 178 ~NDi~ml~~ag~~vav~-na~~ 198 (230)
T d1wr8a_ 178 ENDLDAFKVVGYKVAVA-QAPK 198 (230)
T ss_dssp GGGHHHHHHSSEEEECT-TSCH
T ss_pred ccHHHHHHHCCeEEEEC-CCCH
Confidence 99999999999999999 8753
|
| >d1nrwa_ c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YwpJ species: Bacillus subtilis [TaxId: 1423]
Probab=99.14 E-value=2.7e-11 Score=116.06 Aligned_cols=43 Identities=26% Similarity=0.250 Sum_probs=40.0
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCC
Q 044020 444 DPVRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAKECGILT 486 (563)
Q Consensus 444 d~~~~~~~~~I~~l~~~gi~v~i~TGd~~~~a~~~a~~lgi~~ 486 (563)
..+.+.+.++|++|+++|++++++|||+...+..+++++++..
T Consensus 17 ~~i~~~~~~~l~~l~~~Gi~~~i~TGR~~~~~~~~~~~l~~~~ 59 (285)
T d1nrwa_ 17 HQVSLENENALRQAQRDGIEVVVSTGRAHFDVMSIFEPLGIKT 59 (285)
T ss_dssp SCCCHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHGGGTCCC
T ss_pred CccCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHhCCCc
Confidence 4578999999999999999999999999999999999999864
|
| >d1l6ra_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=99.11 E-value=1.3e-10 Score=107.26 Aligned_cols=118 Identities=19% Similarity=0.220 Sum_probs=83.3
Q ss_pred cCCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCceeechhhhc--------------------CCC
Q 044020 443 KDPVRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAKECGILTSDGEAVEGPEFRN--------------------MSP 502 (563)
Q Consensus 443 ~d~~~~~~~~~I~~l~~~gi~v~i~TGd~~~~a~~~a~~lgi~~~~~~~~~g~~~~~--------------------~~~ 502 (563)
...+.+++.+++++|++.|++++++|||+...+..++..+|+..+ ....+|..+.. ...
T Consensus 18 ~~~i~~~~~~al~~l~~~g~~v~~~TGr~~~~~~~~~~~~~~~~~-~i~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (225)
T d1l6ra_ 18 DRLISTKAIESIRSAEKKGLTVSLLSGNVIPVVYALKIFLGINGP-VFGENGGIMFDNDGSIKKFFSNEGTNKFLEEMSK 96 (225)
T ss_dssp TSCBCHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCCSC-EEEGGGTEEECTTSCEEESSCSHHHHHHHHHHTT
T ss_pred CCcCCHHHHHHHHHHHHCCCEEEEEcCCchhhhHHHHHHcCCCce-EEeecceEEEeCCccEEEecChHHHHHHHHHHHH
Confidence 345788999999999999999999999999999999999998652 11111110000 000
Q ss_pred C--------C-----------------------CCcceeE-----EEecCh--hhHHHHHHHHHHhcC---CEEEEEcCC
Q 044020 503 A--------D-----------------------IIPKLQV-----MARSLP--SDKHTLVTQLRNTFG---EVVAVTGDG 541 (563)
Q Consensus 503 ~--------~-----------------------~~~~~~v-----~~~~~p--~~K~~~v~~l~~~~g---~~v~~iGDg 541 (563)
. . ......+ +.+..| ..|...++.+.+++| +.|+++|||
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~i~~~~~~K~~ai~~l~~~~~i~~~~v~~~GDs 176 (225)
T d1l6ra_ 97 RTSMRSILTNRWREASTGFDIDPEDVDYVRKEAESRGFVIFYSGYSWHLMNRGEDKAFAVNKLKEMYSLEYDEILVIGDS 176 (225)
T ss_dssp TSSCBCCGGGGGCSSSEEEBCCGGGHHHHHHHHHTTTEEEEEETTEEEEEETTCSHHHHHHHHHHHTTCCGGGEEEECCS
T ss_pred hcCcceeecccceeeeeccccCHHHHHHHHHHHhhcCcEEEECCcEEEecCCccchHHHHHHHhhhhccchhheeeecCC
Confidence 0 0 0000111 122223 479999998887755 579999999
Q ss_pred ccCHHHHhhCCceEeecCCCC
Q 044020 542 TNDASALHEADIGLAMGIAGT 562 (563)
Q Consensus 542 ~ND~~~l~~a~vgiamg~~~~ 562 (563)
.||++||+.||+||||+ ||.
T Consensus 177 ~nD~~m~~~a~~~vav~-na~ 196 (225)
T d1l6ra_ 177 NNDMPMFQLPVRKACPA-NAT 196 (225)
T ss_dssp GGGHHHHTSSSEEEECT-TSC
T ss_pred cchHHHHHHCCeEEEEC-CCc
Confidence 99999999999999999 875
|
| >d1rlma_ c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar phosphatase SupH (YbiV) species: Escherichia coli [TaxId: 562]
Probab=99.09 E-value=2.8e-11 Score=114.94 Aligned_cols=49 Identities=29% Similarity=0.388 Sum_probs=41.6
Q ss_pred ecChh--hHHHHHHHHHHhcC---CEEEEEcCCccCHHHHhhCCceEeecCCCCC
Q 044020 514 RSLPS--DKHTLVTQLRNTFG---EVVAVTGDGTNDASALHEADIGLAMGIAGTE 563 (563)
Q Consensus 514 ~~~p~--~K~~~v~~l~~~~g---~~v~~iGDg~ND~~~l~~a~vgiamg~~~~~ 563 (563)
++.|. .|...++.+.+++| +.|+++|||.||++||+.||.||||+ ||.+
T Consensus 183 di~p~~~sK~~al~~l~~~lgi~~~~vi~~GD~~ND~~Ml~~ag~~vam~-Na~~ 236 (269)
T d1rlma_ 183 DLIIPGLHKANGISRLLKRWDLSPQNVVAIGDSGNDAEMLKMARYSFAMG-NAAE 236 (269)
T ss_dssp EEECTTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHCSEEEECT-TCCH
T ss_pred EEecCchHHHHHHHHHhhhhccccccEEEEcCCcchHHHHHhCCeEEEeC-CCCH
Confidence 34453 59999999988766 57999999999999999999999999 8753
|
| >d1nnla_ c.108.1.4 (A:) Phosphoserine phosphatase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.02 E-value=2e-10 Score=105.20 Aligned_cols=107 Identities=19% Similarity=0.293 Sum_probs=79.7
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCceeechhhhcCCCCCCCcceeEEE----ecChhhH
Q 044020 445 PVRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAKECGILTSDGEAVEGPEFRNMSPADIIPKLQVMA----RSLPSDK 520 (563)
Q Consensus 445 ~~~~~~~~~I~~l~~~gi~v~i~TGd~~~~a~~~a~~lgi~~~~~~~~~g~~~~~~~~~~~~~~~~v~~----~~~p~~K 520 (563)
+++|++.++|+.|+++|++++++||.....+.++++.+|++..+.. +..+..... ....-+. ...+..|
T Consensus 82 ~l~pg~~~~i~~lk~~G~~~~ivS~~~~~~v~~i~~~lgi~~~~v~---an~~~~~~~----G~~~g~~~~~p~~~~~~K 154 (217)
T d1nnla_ 82 HLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNIPATNVF---ANRLKFYFN----GEYAGFDETQPTAESGGK 154 (217)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCCGGGEE---EECEEECTT----SCEEEECTTSGGGSTTHH
T ss_pred ccCHHHHHHHHHHHhCCCEEEEECCCchHHHHHHHHHhCCccccee---eeeeeeeeh----hccccceeeeeeeccchH
Confidence 3689999999999999999999999999999999999999742110 000000000 0000011 1335679
Q ss_pred HHHHHHHHHhcC-CEEEEEcCCccCHHHHhhCCceEeec
Q 044020 521 HTLVTQLRNTFG-EVVAVTGDGTNDASALHEADIGLAMG 558 (563)
Q Consensus 521 ~~~v~~l~~~~g-~~v~~iGDg~ND~~~l~~a~vgiamg 558 (563)
..+++.++...+ +.++++|||.||++|++.||++||++
T Consensus 155 ~~~v~~~~~~~~~~~~~~vGDs~~Di~~~~~ag~~va~~ 193 (217)
T d1nnla_ 155 GKVIKLLKEKFHFKKIIMIGDGATDMEACPPADAFIGFG 193 (217)
T ss_dssp HHHHHHHHHHHCCSCEEEEESSHHHHTTTTTSSEEEEEC
T ss_pred HHHHHHHHhccCccccEEEEeCHhhHHHHHhCCceEEEC
Confidence 999999987644 57999999999999999999999998
|
| >d1k1ea_ c.108.1.5 (A:) Probable phosphatase YrbI {Haemophilus influenzae, HI1679 [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Probable phosphatase YrbI domain: Probable phosphatase YrbI species: Haemophilus influenzae, HI1679 [TaxId: 727]
Probab=99.02 E-value=2.6e-10 Score=100.04 Aligned_cols=84 Identities=21% Similarity=0.285 Sum_probs=72.0
Q ss_pred HHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCceeechhhhcCCCCCCCcceeEEEecChhhHHHHHHHHHHhc
Q 044020 452 EAVQTCLEAGITVRMVTGDNINTARAIAKECGILTSDGEAVEGPEFRNMSPADIIPKLQVMARSLPSDKHTLVTQLRNTF 531 (563)
Q Consensus 452 ~~I~~l~~~gi~v~i~TGd~~~~a~~~a~~lgi~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~~~~ 531 (563)
.+|+.|++.|+.+.++||+....+...++++++.. ++.. ...|...++.+.+++
T Consensus 39 ~gi~~l~~~gi~~~iis~~~~~~v~~~~~~l~~~~------------------------~~~~--~~~K~~~l~~~~~~~ 92 (177)
T d1k1ea_ 39 LGIKMLMDADIQVAVLSGRDSPILRRRIADLGIKL------------------------FFLG--KLEKETACFDLMKQA 92 (177)
T ss_dssp HHHHHHHHTTCEEEEEESCCCHHHHHHHHHHTCCE------------------------EEES--CSCHHHHHHHHHHHH
T ss_pred HHHHHHhhhcEEEEEecCCchhHHHHHHhhhcccc------------------------cccc--cccHHHHHHHHHHHh
Confidence 47999999999999999999999999999999874 5544 456666666666654
Q ss_pred C---CEEEEEcCCccCHHHHhhCCceEeecCCCC
Q 044020 532 G---EVVAVTGDGTNDASALHEADIGLAMGIAGT 562 (563)
Q Consensus 532 g---~~v~~iGDg~ND~~~l~~a~vgiamg~~~~ 562 (563)
+ ++|+++||+.||++||+.|++|+||+ ||.
T Consensus 93 ~i~~~~v~~vGDd~nDl~~l~~~g~siap~-nA~ 125 (177)
T d1k1ea_ 93 GVTAEQTAYIGDDSVDLPAFAACGTSFAVA-DAP 125 (177)
T ss_dssp TCCGGGEEEEECSGGGHHHHHHSSEEEECT-TSC
T ss_pred cCCcceeEEecCCccHHHHHhhCCeEEEcC-Ccc
Confidence 4 78999999999999999999999999 875
|
| >d2rbka1 c.108.1.10 (A:2-261) Sugar-phosphate phosphatase BT4131 {Bacteroides thetaiotaomicron [TaxId: 818]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar-phosphate phosphatase BT4131 species: Bacteroides thetaiotaomicron [TaxId: 818]
Probab=98.98 E-value=1e-10 Score=110.48 Aligned_cols=43 Identities=40% Similarity=0.589 Sum_probs=39.2
Q ss_pred hHHHHHHHHHHhcC---CEEEEEcCCccCHHHHhhCCceEeecCCCC
Q 044020 519 DKHTLVTQLRNTFG---EVVAVTGDGTNDASALHEADIGLAMGIAGT 562 (563)
Q Consensus 519 ~K~~~v~~l~~~~g---~~v~~iGDg~ND~~~l~~a~vgiamg~~~~ 562 (563)
.|...++.+.+++| ++++++|||.||++||+.||.||||+ ||+
T Consensus 186 sK~~al~~l~~~~~i~~~~~~a~GD~~ND~~Ml~~a~~svav~-na~ 231 (260)
T d2rbka1 186 TKQKGIDEIIRHFGIKLEETMSFGDGGNDISMLRHAAIGVAMG-QAK 231 (260)
T ss_dssp SHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TSC
T ss_pred CHHHHHHHHHHhccccHhheeEecCCcccHHHHHhCCeEEEeC-CCC
Confidence 69999999988765 68999999999999999999999999 885
|
| >d2b30a1 c.108.1.10 (A:18-300) PFL1270w orthologue {Plasmodium vivax [TaxId: 5855]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: PFL1270w orthologue species: Plasmodium vivax [TaxId: 5855]
Probab=98.95 E-value=2.4e-10 Score=108.95 Aligned_cols=41 Identities=20% Similarity=0.185 Sum_probs=37.4
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCC
Q 044020 444 DPVRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAKECGI 484 (563)
Q Consensus 444 d~~~~~~~~~I~~l~~~gi~v~i~TGd~~~~a~~~a~~lgi 484 (563)
..+.+.++++|++|+++|++++++|||+...+..+++++++
T Consensus 27 ~~i~~~~~~al~~l~~~Gi~v~i~TGR~~~~~~~~~~~l~~ 67 (283)
T d2b30a1 27 IKVPSENIDAIKEAIEKGYMVSICTGRSKVGILSAFGEENL 67 (283)
T ss_dssp TCSCHHHHHHHHHHHHHTCEEEEECSSCHHHHHHHHCHHHH
T ss_pred CcCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHhCc
Confidence 35889999999999999999999999999999999988764
|
| >d1nf2a_ c.108.1.10 (A:) Hypothetical protein TM0651 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein TM0651 species: Thermotoga maritima [TaxId: 2336]
Probab=98.92 E-value=5.2e-10 Score=105.91 Aligned_cols=44 Identities=34% Similarity=0.444 Sum_probs=38.9
Q ss_pred hHHHHHHHHHHhcC---CEEEEEcCCccCHHHHhhCCceEeecCCCCC
Q 044020 519 DKHTLVTQLRNTFG---EVVAVTGDGTNDASALHEADIGLAMGIAGTE 563 (563)
Q Consensus 519 ~K~~~v~~l~~~~g---~~v~~iGDg~ND~~~l~~a~vgiamg~~~~~ 563 (563)
.|...++.+.+++| ..|+++|||.||++||+.||+||||| ||++
T Consensus 190 ~K~~ai~~l~~~~~i~~~~vva~GD~~ND~~ml~~~~~sva~~-na~~ 236 (267)
T d1nf2a_ 190 DKGKALRFLRERMNWKKEEIVVFGDNENDLFMFEEAGLRVAME-NAIE 236 (267)
T ss_dssp CHHHHHHHHHHHHTCCGGGEEEEECSHHHHHHHTTCSEEEECT-TSCH
T ss_pred chhHHHHHHHHhhccCcccEEEEcCCcchHHHHHhCCcEEEeC-CCCH
Confidence 58899988887765 57999999999999999999999999 8863
|
| >d1s2oa1 c.108.1.10 (A:1-244) Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc 6803 [TaxId: 1148]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sucrose-phosphatase Slr0953 species: Synechocystis sp. pcc 6803 [TaxId: 1148]
Probab=98.85 E-value=2.5e-09 Score=99.58 Aligned_cols=113 Identities=18% Similarity=0.204 Sum_probs=77.3
Q ss_pred chHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCce-eechhhhc---------------------------C
Q 044020 449 GVKEAVQTCLEAGITVRMVTGDNINTARAIAKECGILTSDGEA-VEGPEFRN---------------------------M 500 (563)
Q Consensus 449 ~~~~~I~~l~~~gi~v~i~TGd~~~~a~~~a~~lgi~~~~~~~-~~g~~~~~---------------------------~ 500 (563)
+..+++.++++.|+.++++|||+...+..+.+++++..+...+ -+|..+.. .
T Consensus 22 ~~~~~~~~~~~~g~~v~i~TGR~~~~~~~~~~~~~~~~~~~~i~~~G~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 101 (244)
T d1s2oa1 22 EHLQEYLGDRRGNFYLAYATGRSYHSARELQKQVGLMEPDYWLTAVGSEIYHPEGLDQHWADYLSEHWQRDILQAIADGF 101 (244)
T ss_dssp HHHHHHHHTTGGGEEEEEECSSCHHHHHHHHHHHTCCCCSEEEETTTTEEEETTEECHHHHHHHHTTCCHHHHHHHHHTC
T ss_pred HHHHHHHHHHcCCCEEEEECCCCHHHHHHHHHHcCCCCCceEEeccceEEEEccCcchHHHHHHHHHHhHHHHHHHHhhc
Confidence 4556677788999999999999999999999999987542111 11110000 0
Q ss_pred CC-----C-----------------------------CCCcceeE------EEec--ChhhHHHHHHHHHHhcC---CEE
Q 044020 501 SP-----A-----------------------------DIIPKLQV------MARS--LPSDKHTLVTQLRNTFG---EVV 535 (563)
Q Consensus 501 ~~-----~-----------------------------~~~~~~~v------~~~~--~p~~K~~~v~~l~~~~g---~~v 535 (563)
.. . ........ ..++ ....|...++.+.+.+| +.+
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~K~~a~~~l~~~~gi~~~~~ 181 (244)
T d1s2oa1 102 EALKPQSPLEQNPWKISYHLDPQACPTVIDQLTEMLKETGIPVQVIFSSGKDVDLLPQRSNKGNATQYLQQHLAMEPSQT 181 (244)
T ss_dssp TTEEECCGGGCBTTBEEEEECTTSCTHHHHHHHHHHHTSSCCEEEEEETTTEEEEEETTCSHHHHHHHHHHHTTCCGGGE
T ss_pred ccccccChhhhcceEEEEeccccccHHHHHHHHHHHHhhcccceeeecCCcEEEEEeCccchhHHHHHHHHhccCChhhE
Confidence 00 0 00000000 1122 23469999999998866 569
Q ss_pred EEEcCCccCHHHHhhCCceEeecCCCC
Q 044020 536 AVTGDGTNDASALHEADIGLAMGIAGT 562 (563)
Q Consensus 536 ~~iGDg~ND~~~l~~a~vgiamg~~~~ 562 (563)
+++|||.||++||+.||.|+||| |+.
T Consensus 182 v~~GD~~ND~~Ml~~~~~~vav~-na~ 207 (244)
T d1s2oa1 182 LVCGDSGNDIGLFETSARGVIVR-NAQ 207 (244)
T ss_dssp EEEECSGGGHHHHTSSSEEEECT-TCC
T ss_pred EEEcCCCCCHHHHhhCCcEEEeC-CCC
Confidence 99999999999999999999999 875
|
| >d2feaa1 c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: MtnX-like domain: 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX species: Bacillus subtilis [TaxId: 1423]
Probab=98.78 E-value=2.5e-09 Score=98.27 Aligned_cols=110 Identities=14% Similarity=0.083 Sum_probs=82.4
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCC---CceeechhhhcCCCCCCCcceeEEEecChhhHH
Q 044020 445 PVRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAKECGILTSD---GEAVEGPEFRNMSPADIIPKLQVMARSLPSDKH 521 (563)
Q Consensus 445 ~~~~~~~~~I~~l~~~gi~v~i~TGd~~~~a~~~a~~lgi~~~~---~~~~~g~~~~~~~~~~~~~~~~v~~~~~p~~K~ 521 (563)
+++|++.+.++.|++.|++++++|+.....+..+++++|+.... ...+.+...... .............|..|.
T Consensus 75 ~l~pg~~~~l~~L~~~g~~~~ivS~~~~~~i~~~l~~l~~~~~~~an~~~~~~~~~~~~---~~~~~~~~~~~~k~~~~~ 151 (226)
T d2feaa1 75 KIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLEGIVEKDRIYCNHASFDNDYIHID---WPHSCKGTCSNQCGCCKP 151 (226)
T ss_dssp CBCTTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHTTTSCGGGEEEEEEECSSSBCEEE---CTTCCCTTCCSCCSSCHH
T ss_pred chhHHHHHHHHHHHhcccccccCCcchhhhHHHHHHHcCCccceeeeeEEEeCCcceec---cccccccccccCCHHHHH
Confidence 37899999999999999999999999999999999999875420 011111110000 000111133345678899
Q ss_pred HHHHHHHHhcCCEEEEEcCCccCHHHHhhCCceEeec
Q 044020 522 TLVTQLRNTFGEVVAVTGDGTNDASALHEADIGLAMG 558 (563)
Q Consensus 522 ~~v~~l~~~~g~~v~~iGDg~ND~~~l~~a~vgiamg 558 (563)
.+++.++.. ++.|+++||+.||++|++.||+++|++
T Consensus 152 ~~~~~~~~~-~~~~i~iGDs~~Dl~~a~~A~~~~a~~ 187 (226)
T d2feaa1 152 SVIHELSEP-NQYIIMIGDSVTDVEAAKLSDLCFARD 187 (226)
T ss_dssp HHHHHHCCT-TCEEEEEECCGGGHHHHHTCSEEEECH
T ss_pred HHHHHhcCC-CceEEEEeCchhhHHHHHHCCEEEEec
Confidence 999999887 899999999999999999999999987
|
| >d1wpga4 f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATPase, transmembrane domain M {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Membrane and cell surface proteins and peptides fold: Calcium ATPase, transmembrane domain M superfamily: Calcium ATPase, transmembrane domain M family: Calcium ATPase, transmembrane domain M domain: Calcium ATPase, transmembrane domain M species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=98.78 E-value=1.2e-09 Score=111.94 Aligned_cols=122 Identities=30% Similarity=0.459 Sum_probs=92.0
Q ss_pred CCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccchhhHHHHHHHHHHHHhhhhccCCchHH
Q 044020 125 GGEDETPLQVKLNGVATIIGKIELFFSVLEFLVLIGRFLGEKVIHNEFTDWSSADALTLIDYFAVVVTIIDVAVPEGLPL 204 (563)
Q Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ili~~~P~~l~~ 204 (563)
....++|.+.++++....+.......+...+...+..+. .......|. ..+...|..+++++++++|++||+
T Consensus 127 ~~~~~~P~d~~l~~~g~~i~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~----~~~~~~~~~ai~l~V~~iPEgLp~ 198 (472)
T d1wpga4 127 TEQDKTPLQQKLDEFGEQLSKVISLICVAVWLINIGHFN----DPVHGGSWI----RGAIYYFKIAVALAVAAIPEGLPA 198 (472)
T ss_dssp CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCTTSS----SCCSSSCSS----SCGGGHHHHHHHHHHHHSCTTHHH
T ss_pred ccccCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHhhhhhH----HHHHHHHHHHHHHHHHhChhhHHH
Confidence 345689999999998888766655444443332111100 000111222 234567888999999999999999
Q ss_pred HHHHHHHHHHHHHhhCCCeeecchhhhhcCCeeeeecccc--cccccCceEE
Q 044020 205 AVTLSLAFAMKKLMNDGALVRHLSACETMGSASCICTDKT--RMLTTNHMVV 254 (563)
Q Consensus 205 ~~~~~~~~~~~~l~~~~i~~k~~~~le~l~~v~~i~~DKT--GTLT~~~~~v 254 (563)
+++++++.+.++|+|+|+++|+..++|++|+..+.|.||| +|||.|.+.+
T Consensus 199 ~vti~La~~~~rmak~~~lVr~L~avE~~g~~~~~~~~k~i~~~l~~n~~~v 250 (472)
T d1wpga4 199 VITTCLALGTRRMAKKNAIVRSLPSVETLGRAIYNNMKQFIRYLISSNVGEV 250 (472)
T ss_dssp HHHHHHHHHHHHHHTTTEEESCTTHHHHHTHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhccchhhhHHHHHHHHHHHHHHhHHhhhhhhhhhHHHH
Confidence 9999999999999999999999999999999999999998 8999886655
|
| >d1rkua_ c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Homoserine kinase ThrH domain: Homoserine kinase ThrH species: Pseudomonas aeruginosa [TaxId: 287]
Probab=98.68 E-value=3.2e-08 Score=88.76 Aligned_cols=104 Identities=18% Similarity=0.155 Sum_probs=73.9
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCceeechhhhcCCCCCCCcceeEEEecChhhHHHHHH
Q 044020 446 VRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAKECGILTSDGEAVEGPEFRNMSPADIIPKLQVMARSLPSDKHTLVT 525 (563)
Q Consensus 446 ~~~~~~~~I~~l~~~gi~v~i~TGd~~~~a~~~a~~lgi~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~ 525 (563)
..+.....+..+ +.+.+.+++|+............+++.......+.... ...........+..+...++
T Consensus 70 ~~~~~~~~~~~~-~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~l~~~~---------~~~~~~~~~~~~~~~~~~~~ 139 (206)
T d1rkua_ 70 PLEGAVEFVDWL-RERFQVVILSDTFYEFSQPLMRQLGFPTLLCHKLEIDD---------SDRVVGYQLRQKDPKRQSVI 139 (206)
T ss_dssp CCTTHHHHHHHH-HTTSEEEEEEEEEHHHHHHHHHHTTCCCEEEEEEEECT---------TSCEEEEECCSSSHHHHHHH
T ss_pred ccchHHHHHHHh-hcCceEEEeccCchHHHHHHHHHhCCchhhcceeeeec---------ccccccccccchhhHHHHHH
Confidence 455666666655 57899999999999999999999998752211111000 00111233344556677788
Q ss_pred HHHHhcCCEEEEEcCCccCHHHHhhCCceEeecCCC
Q 044020 526 QLRNTFGEVVAVTGDGTNDASALHEADIGLAMGIAG 561 (563)
Q Consensus 526 ~l~~~~g~~v~~iGDg~ND~~~l~~a~vgiamg~~~ 561 (563)
.++.. .+.|+|||||.||++||+.||+||||+ +.
T Consensus 140 ~~~i~-~~eviaiGDg~NDi~Ml~~Ag~gIAmn-a~ 173 (206)
T d1rkua_ 140 AFKSL-YYRVIAAGDSYNDTTMLSEAHAGILFH-AP 173 (206)
T ss_dssp HHHHT-TCEEEEEECSSTTHHHHHHSSEEEEES-CC
T ss_pred Hhccc-ccceEEecCCccCHHHHHhCCccEEEC-CC
Confidence 88877 899999999999999999999999995 53
|
| >d1u02a_ c.108.1.15 (A:) Trehalose-6-phosphate phosphatase related protein {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Trehalose-phosphatase domain: Trehalose-6-phosphate phosphatase related protein species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=98.47 E-value=3.9e-08 Score=89.80 Aligned_cols=38 Identities=21% Similarity=0.405 Sum_probs=32.4
Q ss_pred hHHHHHHHHHHhcCCEEEEEcCCccCHHHHhhCCceEeec
Q 044020 519 DKHTLVTQLRNTFGEVVAVTGDGTNDASALHEADIGLAMG 558 (563)
Q Consensus 519 ~K~~~v~~l~~~~g~~v~~iGDg~ND~~~l~~a~vgiamg 558 (563)
.|...++.+.++ +.++++||+.||++||+.++.|+||+
T Consensus 159 ~Kg~al~~l~~~--~~~i~~GDs~ND~~Mf~~~~~~~av~ 196 (229)
T d1u02a_ 159 NKGSAIRSVRGE--RPAIIAGDDATDEAAFEANDDALTIK 196 (229)
T ss_dssp CHHHHHHHHHTT--SCEEEEESSHHHHHHHHTTTTSEEEE
T ss_pred CHHHHHHHHhcc--ccceeecCCCChHHHHhccCCeEEEE
Confidence 699999999876 57889999999999999996665554
|
| >d1j97a_ c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=98.42 E-value=1.4e-07 Score=84.65 Aligned_cols=106 Identities=17% Similarity=0.169 Sum_probs=72.8
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCceeechhhhcCCCCCCCcceeEEEe--cChhhHH
Q 044020 444 DPVRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAKECGILTSDGEAVEGPEFRNMSPADIIPKLQVMAR--SLPSDKH 521 (563)
Q Consensus 444 d~~~~~~~~~I~~l~~~gi~v~i~TGd~~~~a~~~a~~lgi~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~--~~p~~K~ 521 (563)
.++.+++.+.++.++..|..++++||.....+....++.++.......+...... ....... ..+..|.
T Consensus 74 ~~~~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~ 144 (210)
T d1j97a_ 74 ITPTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLGLDYAFANRLIVKDGK---------LTGDVEGEVLKENAKG 144 (210)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSEEEEEEEEEETTE---------EEEEEECSSCSTTHHH
T ss_pred hhhhhhHHHHHHHHHHcCCEEEeecccccccccchhhccchhhhhhhhhcccccc---------cccccccccccccccc
Confidence 4678889999999999999999999999999999999988764211111111100 0001111 1123344
Q ss_pred HHHHHHHHhc---CCEEEEEcCCccCHHHHhhCCceEeec
Q 044020 522 TLVTQLRNTF---GEVVAVTGDGTNDASALHEADIGLAMG 558 (563)
Q Consensus 522 ~~v~~l~~~~---g~~v~~iGDg~ND~~~l~~a~vgiamg 558 (563)
..+..+...+ .+.++++|||.||++|++.||+||||+
T Consensus 145 ~~~~~~~~~~~~~~~~~i~iGDs~nDi~m~~~ag~~va~n 184 (210)
T d1j97a_ 145 EILEKIAKIEGINLEDTVAVGDGANDISMFKKAGLKIAFC 184 (210)
T ss_dssp HHHHHHHHHHTCCGGGEEEEESSGGGHHHHHHCSEEEEES
T ss_pred chhhhHHHHhcccccceEEecCCcChHHHHHHCCCCEEEC
Confidence 4444444332 367999999999999999999999993
|
| >d2fuea1 c.108.1.10 (A:13-256) Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.42 E-value=2.1e-08 Score=92.39 Aligned_cols=43 Identities=16% Similarity=0.230 Sum_probs=37.0
Q ss_pred hHHHHHHHHHHhcCCEEEEEcCC----ccCHHHHhhCC-ceEeecCCCC
Q 044020 519 DKHTLVTQLRNTFGEVVAVTGDG----TNDASALHEAD-IGLAMGIAGT 562 (563)
Q Consensus 519 ~K~~~v~~l~~~~g~~v~~iGDg----~ND~~~l~~a~-vgiamg~~~~ 562 (563)
.|+..++.|.+.-.+.|+++||+ .||++||+.|+ .|+||+ |+.
T Consensus 185 sKg~al~~L~~~~~~ev~afGD~~~~G~ND~eml~~a~~~~~av~-na~ 232 (244)
T d2fuea1 185 DKRYCLDSLDQDSFDTIHFFGNETSPGGNDFEIFADPRTVGHSVV-SPQ 232 (244)
T ss_dssp STTHHHHHHTTSCCSEEEEEESCCSTTSTTHHHHHSTTSEEEECS-SHH
T ss_pred cHHHHHHHHhcCChhhEEEEcCCCCCCCCcHHHHHcCCCcEEEcC-CHH
Confidence 58899999987546799999995 59999999998 699999 764
|
| >d2amya1 c.108.1.10 (A:4-246) Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.07 E-value=2.1e-07 Score=85.44 Aligned_cols=40 Identities=8% Similarity=0.100 Sum_probs=32.7
Q ss_pred cCCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcC
Q 044020 443 KDPVRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAKECG 483 (563)
Q Consensus 443 ~d~~~~~~~~~I~~l~~~gi~v~i~TGd~~~~a~~~a~~lg 483 (563)
...+.+.++++|++|++.|+ ++++|||+...+.....+.+
T Consensus 18 ~~~i~~~~~~al~~l~~~g~-~~i~Tgr~~~~~~~~~~~~~ 57 (243)
T d2amya1 18 RQKITKEMDDFLQKLRQKIK-IGVVGGSDFEKVQEQLGNDV 57 (243)
T ss_dssp TSCCCHHHHHHHHHHTTTSE-EEEECSSCHHHHHHHHCTTH
T ss_pred CCcCCHHHHHHHHHHHcCCC-EEEEcCCChHHhHHHHhhhc
Confidence 44689999999999999885 78999999888777665544
|
| >d1te2a_ c.108.1.6 (A:) Phosphatase YniC {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphatase YniC species: Escherichia coli [TaxId: 562]
Probab=98.02 E-value=2.8e-06 Score=76.58 Aligned_cols=95 Identities=18% Similarity=0.234 Sum_probs=75.0
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCceeechhhhcCCCCCCCcceeEEEecChhhHHHHHH
Q 044020 446 VRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAKECGILTSDGEAVEGPEFRNMSPADIIPKLQVMARSLPSDKHTLVT 525 (563)
Q Consensus 446 ~~~~~~~~I~~l~~~gi~v~i~TGd~~~~a~~~a~~lgi~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~ 525 (563)
+.|++.++++.|+++|+++.++|+.+...+....+.+|+......++.+.+.. .....|+--..+++
T Consensus 89 ~~pg~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~~l~~~F~~i~~~~~~~-------------~~Kp~~~~~~~~~~ 155 (218)
T d1te2a_ 89 LLPGVREAVALCKEQGLLVGLASASPLHMLEKVLTMFDLRDSFDALASAEKLP-------------YSKPHPQVYLDCAA 155 (218)
T ss_dssp BCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSEEEECTTSS-------------CCTTSTHHHHHHHH
T ss_pred ccchHHHHHHHhhhccccccccccccccccccccccccccccccccccccccc-------------cchhhHHHHHHHHH
Confidence 46999999999999999999999999999999999999976555555554321 12233444556666
Q ss_pred HHHHhcCCEEEEEcCCccCHHHHhhCCce
Q 044020 526 QLRNTFGEVVAVTGDGTNDASALHEADIG 554 (563)
Q Consensus 526 ~l~~~~g~~v~~iGDg~ND~~~l~~a~vg 554 (563)
.+.-. .+.+++|||+.+|+.|-+.+|+.
T Consensus 156 ~l~~~-~~~~l~igD~~~di~aA~~~G~~ 183 (218)
T d1te2a_ 156 KLGVD-PLTCVALEDSVNGMIASKAARMR 183 (218)
T ss_dssp HHTSC-GGGEEEEESSHHHHHHHHHTTCE
T ss_pred HcCCC-chhcEEEeeCHHHHHHHHHcCCE
Confidence 66554 68899999999999999999984
|
| >d2go7a1 c.108.1.6 (A:3-206) Hypothetical protein SP2064 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein SP2064 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=97.76 E-value=7.4e-06 Score=72.93 Aligned_cols=99 Identities=19% Similarity=0.206 Sum_probs=71.0
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCceeechhhhcCCCCCCCcceeEEEecChhhHHHHH
Q 044020 445 PVRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAKECGILTSDGEAVEGPEFRNMSPADIIPKLQVMARSLPSDKHTLV 524 (563)
Q Consensus 445 ~~~~~~~~~I~~l~~~gi~v~i~TGd~~~~a~~~a~~lgi~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v 524 (563)
.+.|++.++++.|+++|+++.++|+... .+..+.+++|+......++...+. ......|+--..++
T Consensus 82 ~~~pgv~~~L~~L~~~g~~~~v~Sn~~~-~~~~~l~~~gl~~~f~~i~~s~~~-------------~~~Kp~~~~~~~~~ 147 (204)
T d2go7a1 82 VLMPGAREVLAWADESGIQQFIYTHKGN-NAFTILKDLGVESYFTEILTSQSG-------------FVRKPSPEAATYLL 147 (204)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCT-HHHHHHHHHTCGGGEEEEECGGGC-------------CCCTTSSHHHHHHH
T ss_pred cccchHHhhhhcccccccchhhhcccch-hhhhhhhhcccccccccccccccc-------------cccchhHHHHHHHH
Confidence 3679999999999999999999999765 556788999997643333332221 11223344445556
Q ss_pred HHHHHhcCCEEEEEcCCccCHHHHhhCCce-Eeec
Q 044020 525 TQLRNTFGEVVAVTGDGTNDASALHEADIG-LAMG 558 (563)
Q Consensus 525 ~~l~~~~g~~v~~iGDg~ND~~~l~~a~vg-iamg 558 (563)
+.+.-. .+.+++|||+.+|+.+-+.+|+. |.+.
T Consensus 148 ~~~~~~-p~~~l~VgD~~~Di~~A~~~G~~~i~v~ 181 (204)
T d2go7a1 148 DKYQLN-SDNTYYIGDRTLDVEFAQNSGIQSINFL 181 (204)
T ss_dssp HHHTCC-GGGEEEEESSHHHHHHHHHHTCEEEESS
T ss_pred HHhCCC-CceEEEEeCCHHHHHHHHHcCCeEEEEc
Confidence 665544 57999999999999999999984 4443
|
| >d1swva_ c.108.1.3 (A:) Phosphonoacetaldehyde hydrolase {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphonoacetaldehyde hydrolase-like domain: Phosphonoacetaldehyde hydrolase species: Bacillus cereus [TaxId: 1396]
Probab=97.75 E-value=1.6e-05 Score=73.46 Aligned_cols=96 Identities=21% Similarity=0.160 Sum_probs=74.6
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCC-CceeechhhhcCCCCCCCcceeEEEecChhhHHHH
Q 044020 445 PVRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAKECGILTSD-GEAVEGPEFRNMSPADIIPKLQVMARSLPSDKHTL 523 (563)
Q Consensus 445 ~~~~~~~~~I~~l~~~gi~v~i~TGd~~~~a~~~a~~lgi~~~~-~~~~~g~~~~~~~~~~~~~~~~v~~~~~p~~K~~~ 523 (563)
++.|++.++++.|+++|+++.++|+.+...+..+.+.+|+.... ..++.+.+. ......|+.-..+
T Consensus 99 ~~~~g~~~~L~~Lk~~g~~i~i~Tn~~~~~~~~~l~~~~l~~~f~d~~~~~d~~-------------~~~KP~p~~~~~~ 165 (257)
T d1swva_ 99 SPINGVKEVIASLRERGIKIGSTTGYTREMMDIVAKEAALQGYKPDFLVTPDDV-------------PAGRPYPWMCYKN 165 (257)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEBCSSCHHHHHHHHHHHHHTTCCCSCCBCGGGS-------------SCCTTSSHHHHHH
T ss_pred ccCCcHHHHHHHHHhcccceeecCCCchhhHHHHHHHHhhcccccccccccccc-------------cccccChHHHHHH
Confidence 47899999999999999999999999999999999999987632 344444432 1123345555666
Q ss_pred HHHHHHhcCCEEEEEcCCccCHHHHhhCCc
Q 044020 524 VTQLRNTFGEVVAVTGDGTNDASALHEADI 553 (563)
Q Consensus 524 v~~l~~~~g~~v~~iGDg~ND~~~l~~a~v 553 (563)
++.+...-.+.+++|||+.+|+.+-+.||+
T Consensus 166 ~~~l~~~p~~~~v~VgDs~~Di~aA~~aG~ 195 (257)
T d1swva_ 166 AMELGVYPMNHMIKVGDTVSDMKEGRNAGM 195 (257)
T ss_dssp HHHHTCCSGGGEEEEESSHHHHHHHHHTTS
T ss_pred HHHhCCCCcceEEEEeCChhhHHHHHHCCC
Confidence 666664313789999999999999999997
|
| >d2hsza1 c.108.1.6 (A:1-224) Phosphoglycolate phosphatase Gph {Haemophilus somnus [TaxId: 731]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase Gph species: Haemophilus somnus [TaxId: 731]
Probab=97.74 E-value=1.4e-05 Score=71.88 Aligned_cols=98 Identities=21% Similarity=0.258 Sum_probs=72.8
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCceeechhhhcCCCCCCCcceeEEEecChhhHHHHHH
Q 044020 446 VRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAKECGILTSDGEAVEGPEFRNMSPADIIPKLQVMARSLPSDKHTLVT 525 (563)
Q Consensus 446 ~~~~~~~~I~~l~~~gi~v~i~TGd~~~~a~~~a~~lgi~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~ 525 (563)
+.|++.+.++.|++.|+++.++|+.+...+..+.+++|+......++...+.. .....|+--..+.+
T Consensus 96 l~~~~~~~L~~L~~~g~~~~i~tn~~~~~~~~~l~~~gl~~~f~~~~~~~~~~-------------~~kp~p~~~~~~~~ 162 (224)
T d2hsza1 96 LYPNVKETLEALKAQGYILAVVTNKPTKHVQPILTAFGIDHLFSEMLGGQSLP-------------EIKPHPAPFYYLCG 162 (224)
T ss_dssp ECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGCSEEECTTTSS-------------SCTTSSHHHHHHHH
T ss_pred hHHHHHHHHHHHhccCCcccccccccHHHHHHHHHhcCchhhccccccccccc-------------cccccchhhHHHHH
Confidence 57999999999999999999999999999999999999976443333332211 01122344444555
Q ss_pred HHHHhcCCEEEEEcCCccCHHHHhhCCc-eEee
Q 044020 526 QLRNTFGEVVAVTGDGTNDASALHEADI-GLAM 557 (563)
Q Consensus 526 ~l~~~~g~~v~~iGDg~ND~~~l~~a~v-giam 557 (563)
.++-. .+.+++|||+.+|+.+-+.||+ .|.+
T Consensus 163 ~~~~~-~~~~~~igD~~~Di~~A~~aG~~~i~v 194 (224)
T d2hsza1 163 KFGLY-PKQILFVGDSQNDIFAAHSAGCAVVGL 194 (224)
T ss_dssp HHTCC-GGGEEEEESSHHHHHHHHHHTCEEEEE
T ss_pred Hhhhh-hhccchhcCcHHHHHHHHHcCCeEEEE
Confidence 55544 5789999999999999999997 4443
|
| >d2hcfa1 c.108.1.6 (A:2-229) Hypothetical protein CT1708 {Chlorobium tepidum [TaxId: 1097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein CT1708 species: Chlorobium tepidum [TaxId: 1097]
Probab=97.69 E-value=1.4e-05 Score=72.48 Aligned_cols=96 Identities=17% Similarity=0.160 Sum_probs=67.0
Q ss_pred CCcchHHHHHHHHhCC-CeEEEEcCCCHHHHHHHHHHcCCCCCCCceeechhhhcCCCCCCCcceeEEEecChhhHHHHH
Q 044020 446 VRPGVKEAVQTCLEAG-ITVRMVTGDNINTARAIAKECGILTSDGEAVEGPEFRNMSPADIIPKLQVMARSLPSDKHTLV 524 (563)
Q Consensus 446 ~~~~~~~~I~~l~~~g-i~v~i~TGd~~~~a~~~a~~lgi~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v 524 (563)
+.|++.++++.|++.| +++.++|+.+...+....+.+|+......++.+.+... ....|..-...+
T Consensus 92 ~~~g~~~~L~~L~~~g~~~~~v~t~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~-------------~k~~p~~~~~~~ 158 (228)
T d2hcfa1 92 LLEGVRELLDALSSRSDVLLGLLTGNFEASGRHKLKLPGIDHYFPFGAFADDALD-------------RNELPHIALERA 158 (228)
T ss_dssp ECTTHHHHHHHHHTCTTEEEEEECSSCHHHHHHHHHTTTCSTTCSCEECTTTCSS-------------GGGHHHHHHHHH
T ss_pred ecCchHHHHhhhhccccccccccCCCcchhhhhhhhhhccccccccccccccccc-------------ccchhHHHHHHh
Confidence 4689999999999987 89999999999999999999999875444444332110 000111112223
Q ss_pred HHHHHh--cCCEEEEEcCCccCHHHHhhCCce
Q 044020 525 TQLRNT--FGEVVAVTGDGTNDASALHEADIG 554 (563)
Q Consensus 525 ~~l~~~--~g~~v~~iGDg~ND~~~l~~a~vg 554 (563)
+.+... -++.++||||+.+|+.|-+.||+.
T Consensus 159 ~~~~~~~~~p~~~l~VGD~~~Di~aA~~aG~~ 190 (228)
T d2hcfa1 159 RRMTGANYSPSQIVIIGDTEHDIRCARELDAR 190 (228)
T ss_dssp HHHHCCCCCGGGEEEEESSHHHHHHHHTTTCE
T ss_pred hhhcccCCChhHheeecCChHHHHHHHHcCCE
Confidence 333211 136899999999999999999963
|
| >d2bdua1 c.108.1.21 (A:7-297) Cytosolic 5'-nucleotidase III {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Pyrimidine 5'-nucleotidase (UMPH-1) domain: Cytosolic 5'-nucleotidase III species: Mouse (Mus musculus) [TaxId: 10090]
Probab=97.49 E-value=7.7e-05 Score=69.60 Aligned_cols=101 Identities=13% Similarity=0.185 Sum_probs=65.0
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCceeech-hhhcCCCCCCCcceeEEEe--cChhhHH
Q 044020 445 PVRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAKECGILTSDGEAVEGP-EFRNMSPADIIPKLQVMAR--SLPSDKH 521 (563)
Q Consensus 445 ~~~~~~~~~I~~l~~~gi~v~i~TGd~~~~a~~~a~~lgi~~~~~~~~~g~-~~~~~~~~~~~~~~~v~~~--~~p~~K~ 521 (563)
++|+++.+.++.|++.|+++.++||--...+.++++++|+..++..++... .+.. .... .-|-. .....|.
T Consensus 135 ~Lr~G~~e~~~~l~~~~i~~~IvSgG~~~~ie~vl~~lg~~~~ni~I~sN~l~f~~---~~~~---~~~~~~~i~~~~K~ 208 (291)
T d2bdua1 135 MLKEGYENFFGKLQQHGIPVFIFSAGIGDVLEEVIRQAGVYHSNVKVVSNFMDFDE---NGVL---KGFKGELIHVFNKH 208 (291)
T ss_dssp CBCBTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHHHTTCCBTTEEEEEECEEECT---TSBE---EEECSSCCCTTCHH
T ss_pred CcccCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHcCCCccCceEEeeEEEEeC---CeeE---eeccCCccccccCc
Confidence 489999999999999999999999999999999999999875432222211 0000 0000 00000 1222343
Q ss_pred HHH----HHHHHh-cCCEEEEEcCCccCHHHHhhC
Q 044020 522 TLV----TQLRNT-FGEVVAVTGDGTNDASALHEA 551 (563)
Q Consensus 522 ~~v----~~l~~~-~g~~v~~iGDg~ND~~~l~~a 551 (563)
..+ ..++.. ....++++|||.||+.|.+.+
T Consensus 209 ~~~~~~~~~~~~~~~~~~vI~iGDs~~Dl~Ma~g~ 243 (291)
T d2bdua1 209 DGALKNTDYFSQLKDNSNIILLGDSQGDLRMADGV 243 (291)
T ss_dssp HHHHTTHHHHHHTTTCCEEEEEESSSGGGGTTTTC
T ss_pred chhhhhHHHHhccCCcCcEEEEeCCHhHHHHHhCC
Confidence 222 223332 136799999999999998753
|
| >d1u7pa_ c.108.1.17 (A:) Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Magnesium-dependent phosphatase-1, Mdp1 domain: Magnesium-dependent phosphatase-1, Mdp1 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=97.47 E-value=8.2e-05 Score=63.48 Aligned_cols=93 Identities=9% Similarity=0.002 Sum_probs=64.8
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCH-HHHHHHHHHcCCCCCCCceeechhhhcCCCCCCCcceeEEEecCh--hhHH
Q 044020 445 PVRPGVKEAVQTCLEAGITVRMVTGDNI-NTARAIAKECGILTSDGEAVEGPEFRNMSPADIIPKLQVMARSLP--SDKH 521 (563)
Q Consensus 445 ~~~~~~~~~I~~l~~~gi~v~i~TGd~~-~~a~~~a~~lgi~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~p--~~K~ 521 (563)
++.|++.++++.|+++|+++.++|+.+. ..+..+.+.+++...... +.....| +.-.
T Consensus 46 ~l~pgv~e~L~~L~~~G~~~~v~S~~~~~~~~~~~l~~~~~~~~~~~--------------------~~~~~kp~~~~~~ 105 (164)
T d1u7pa_ 46 QLYPEVPEVLGRLQSLGVPVAAASRTSEIQGANQLLELFDLGKYFIQ--------------------REIYPGSKVTHFE 105 (164)
T ss_dssp CCCTTHHHHHHHHHHTTCCEEEEECCSCHHHHHHHHHHTTCGGGCSE--------------------EEESSSCHHHHHH
T ss_pred ccchHHHHHHHHHHHCCCcEEEEeccccchhhccchhccccccccee--------------------eecccCCChHHHH
Confidence 4789999999999999999999997654 556777788877532111 2222222 2223
Q ss_pred HHHHHHHHhcCCEEEEEcCCccCHHHHhhCCc-eEeec
Q 044020 522 TLVTQLRNTFGEVVAVTGDGTNDASALHEADI-GLAMG 558 (563)
Q Consensus 522 ~~v~~l~~~~g~~v~~iGDg~ND~~~l~~a~v-giamg 558 (563)
.+++.+.-. .+.+++|||...|+.+-+.||+ .|.+.
T Consensus 106 ~~~~~~~~~-~~~~l~igD~~~di~aA~~aG~~~i~v~ 142 (164)
T d1u7pa_ 106 RLHHKTGVP-FSQMVFFDDENRNIIDVGRLGVTCIHIR 142 (164)
T ss_dssp HHHHHHCCC-GGGEEEEESCHHHHHHHHTTTCEEEECS
T ss_pred HHHHHhCCC-hHHEEEEcCCHHHHHHHHHcCCEEEEEC
Confidence 444444333 4789999999999999999999 44443
|
| >d1ltqa1 c.108.1.9 (A:153-301) Polynucleotide kinase, phosphatase domain {Bacteriophage T4 [TaxId: 10665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: phosphatase domain of polynucleotide kinase domain: Polynucleotide kinase, phosphatase domain species: Bacteriophage T4 [TaxId: 10665]
Probab=97.36 E-value=0.00027 Score=58.82 Aligned_cols=106 Identities=14% Similarity=0.099 Sum_probs=63.1
Q ss_pred ccCCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCceeechhhhcCCCCCCCcceeEEEe------c
Q 044020 442 IKDPVRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAKECGILTSDGEAVEGPEFRNMSPADIIPKLQVMAR------S 515 (563)
Q Consensus 442 ~~d~~~~~~~~~I~~l~~~gi~v~i~TGd~~~~a~~~a~~lgi~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~------~ 515 (563)
..+.+.|++.+.++.|+++|++++++|||+......+.+.++... ..+..+.. ..-...+.+ .
T Consensus 33 ~~~~~~p~v~~~l~~l~~~G~~Iii~T~R~~~~~~~t~~~l~~~~--------~~~~~~~~---~~~~~~~~~~~~~~~~ 101 (149)
T d1ltqa1 33 DTDVINPMVVELSKMYALMGYQIVVVSGRESGTKEDPTKYYRMTR--------KWVEDIAG---VPLVMQCQREQGDTRK 101 (149)
T ss_dssp GGCCBCHHHHHHHHHHHHTTCEEEEEECSCCCCSSSTTHHHHHHH--------HHHHHTTC---CCCSEEEECCTTCCSC
T ss_pred ccCccCHHHHHHHHHHHhccCeEEEEecCcHHHHHHHHHHHHHHh--------hhhhhcCC---CcEEEeecccccccCC
Confidence 357789999999999999999999999997432211111111000 00000000 000001111 1
Q ss_pred ChhhHHHHHHHHHHhcCCEEEEEcCCccCHHHHhhCCc-eEeec
Q 044020 516 LPSDKHTLVTQLRNTFGEVVAVTGDGTNDASALHEADI-GLAMG 558 (563)
Q Consensus 516 ~p~~K~~~v~~l~~~~g~~v~~iGDg~ND~~~l~~a~v-giamg 558 (563)
.+..|..+++.+.....+.++++||...|+.|.+.+|+ .+.+.
T Consensus 102 d~~~k~~~l~~~~~~~~~i~~~igD~~~dv~a~~~~Gi~~~~V~ 145 (149)
T d1ltqa1 102 DDVVKEEIFWKHIAPHFDVKLAIDDRTQVVEMWRRIGVECWQVA 145 (149)
T ss_dssp HHHHHHHHHHHHTTTTCEEEEEEECCHHHHHHHHHTTCCEEECS
T ss_pred chHHHHHHHHHhccCCCceEEEEcCCHHHHHHHHHCCCcEEEeC
Confidence 23457777777666524567889999999999999998 44443
|
| >d2hdoa1 c.108.1.6 (A:1-207) Phosphoglycolate phosphatase {Lactobacillus plantarum [TaxId: 1590]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase species: Lactobacillus plantarum [TaxId: 1590]
Probab=97.33 E-value=2.5e-05 Score=69.48 Aligned_cols=97 Identities=11% Similarity=0.185 Sum_probs=70.2
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCceeechhhhcCCCCCCCcceeEEEecChhhHHHHH
Q 044020 445 PVRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAKECGILTSDGEAVEGPEFRNMSPADIIPKLQVMARSLPSDKHTLV 524 (563)
Q Consensus 445 ~~~~~~~~~I~~l~~~gi~v~i~TGd~~~~a~~~a~~lgi~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v 524 (563)
++.|++.++++.|++ ++++.++|+.....+..+.+++|+......++.+.+.. .....|+--..++
T Consensus 82 ~~~~g~~~~L~~l~~-~~~~~ivT~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~-------------~~KP~p~~~~~~~ 147 (207)
T d2hdoa1 82 ELYPGITSLFEQLPS-ELRLGIVTSQRRNELESGMRSYPFMMRMAVTISADDTP-------------KRKPDPLPLLTAL 147 (207)
T ss_dssp EECTTHHHHHHHSCT-TSEEEEECSSCHHHHHHHHTTSGGGGGEEEEECGGGSS-------------CCTTSSHHHHHHH
T ss_pred ccccchhhhhhhhcc-cccccccccccccccccccccccccccccccccccccc-------------cchhhhhhhcccc
Confidence 366899999999975 69999999999999999999999876433333333211 1122344444555
Q ss_pred HHHHHhcCCEEEEEcCCccCHHHHhhCCceEe
Q 044020 525 TQLRNTFGEVVAVTGDGTNDASALHEADIGLA 556 (563)
Q Consensus 525 ~~l~~~~g~~v~~iGDg~ND~~~l~~a~vgia 556 (563)
+.++-. .+.+++|||+.+|+.+-+.||+...
T Consensus 148 ~~~~~~-~~~~l~VgDs~~Di~~a~~aG~~~i 178 (207)
T d2hdoa1 148 EKVNVA-PQNALFIGDSVSDEQTAQAANVDFG 178 (207)
T ss_dssp HHTTCC-GGGEEEEESSHHHHHHHHHHTCEEE
T ss_pred cceeee-ccceeEecCCHHHHHHHHHcCCeEE
Confidence 555433 4789999999999999999999654
|
| >d1zs9a1 c.108.1.22 (A:4-256) E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Enolase-phosphatase E1 domain: E-1 enzyme species: Human(Homo sapiens) [TaxId: 9606]
Probab=97.32 E-value=0.00015 Score=65.84 Aligned_cols=100 Identities=16% Similarity=0.111 Sum_probs=72.4
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCceeec-hhhhcCCCCCCCcceeEEEecChhhHHH
Q 044020 444 DPVRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAKECGILTSDGEAVEG-PEFRNMSPADIIPKLQVMARSLPSDKHT 522 (563)
Q Consensus 444 d~~~~~~~~~I~~l~~~gi~v~i~TGd~~~~a~~~a~~lgi~~~~~~~~~g-~~~~~~~~~~~~~~~~v~~~~~p~~K~~ 522 (563)
-.+.|++.+++++|+++|+++.++|+.+........+.+|+.......... ... ......|+--..
T Consensus 126 ~~~~pg~~e~l~~L~~~g~~l~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~~~d~~-------------~~~KP~p~~~~~ 192 (253)
T d1zs9a1 126 AEFFADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFGHSTEGDILELVDGHFDTK-------------IGHKVESESYRK 192 (253)
T ss_dssp BCCCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHTBTTBCCGGGCSEEECGG-------------GCCTTCHHHHHH
T ss_pred cccCCCHHHHHHHHhhccCceeecCCCcHHHHHHHHHHcCcchhhhhcceeeccc-------------cccCCCcHHHHH
Confidence 347899999999999999999999999999999999999976422111110 000 112333444455
Q ss_pred HHHHHHHhcCCEEEEEcCCccCHHHHhhCCceEee
Q 044020 523 LVTQLRNTFGEVVAVTGDGTNDASALHEADIGLAM 557 (563)
Q Consensus 523 ~v~~l~~~~g~~v~~iGDg~ND~~~l~~a~vgiam 557 (563)
+++.+.-. .++++||||..+|+.+-++||+..+.
T Consensus 193 ~~~~~~~~-p~~~l~vgD~~~dv~aA~~aG~~ti~ 226 (253)
T d1zs9a1 193 IADSIGCS-TNNILFLTDVTREASAAEEADVHVAV 226 (253)
T ss_dssp HHHHHTSC-GGGEEEEESCHHHHHHHHHTTCEEEE
T ss_pred HHHHhCCC-cCcEEEEeCCHHHHHHHHHcCCEEEE
Confidence 56665554 68999999999999999999995443
|
| >d2ah5a1 c.108.1.6 (A:1-210) predicted phosphatase SP0104 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: predicted phosphatase SP0104 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=97.23 E-value=0.00022 Score=63.09 Aligned_cols=93 Identities=19% Similarity=0.185 Sum_probs=68.7
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCceeechhhhcCCCCCCCcceeEEEecChhhHHHHH
Q 044020 445 PVRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAKECGILTSDGEAVEGPEFRNMSPADIIPKLQVMARSLPSDKHTLV 524 (563)
Q Consensus 445 ~~~~~~~~~I~~l~~~gi~v~i~TGd~~~~a~~~a~~lgi~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v 524 (563)
++.+++.+.++.++..+ ++.++|+.+...+....+.+|+......++.+ ...+..|...+
T Consensus 84 ~~~~~~~~~l~~l~~~~-~~~i~t~~~~~~~~~~l~~~gl~~~fd~v~~~-------------------~~~~~~~p~~~ 143 (210)
T d2ah5a1 84 QLFPQIIDLLEELSSSY-PLYITTTKDTSTAQDMAKNLEIHHFFDGIYGS-------------------SPEAPHKADVI 143 (210)
T ss_dssp EECTTHHHHHHHHHTTS-CEEEEEEEEHHHHHHHHHHTTCGGGCSEEEEE-------------------CSSCCSHHHHH
T ss_pred cchhHHHHHHhhhhccc-chhhcccccchhhhHHHHhhcccccccccccc-------------------ccccccccccc
Confidence 46789999999999875 88999999999999999999997643333322 22233344444
Q ss_pred HHHHHhc---CCEEEEEcCCccCHHHHhhCCc-eEee
Q 044020 525 TQLRNTF---GEVVAVTGDGTNDASALHEADI-GLAM 557 (563)
Q Consensus 525 ~~l~~~~---g~~v~~iGDg~ND~~~l~~a~v-giam 557 (563)
+...+.+ ++.+++|||+.+|+.|-+.||+ .|.+
T Consensus 144 ~~~~~~~~~~~~~~v~VGDs~~Di~aa~~aGi~~i~v 180 (210)
T d2ah5a1 144 HQALQTHQLAPEQAIIIGDTKFDMLGARETGIQKLAI 180 (210)
T ss_dssp HHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEE
T ss_pred chhhhhhhcccccceeecCCHHHHHHHHHcCCeEEEE
Confidence 4444443 3789999999999999999998 4444
|
| >d1o08a_ c.108.1.6 (A:) beta-Phosphoglucomutase {Lactococcus lactis [TaxId: 1358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: beta-Phosphoglucomutase species: Lactococcus lactis [TaxId: 1358]
Probab=97.16 E-value=0.00012 Score=65.42 Aligned_cols=99 Identities=9% Similarity=0.121 Sum_probs=70.6
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCceeechhhhcCCCCCCCcceeEEEecChhhHHHH
Q 044020 444 DPVRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAKECGILTSDGEAVEGPEFRNMSPADIIPKLQVMARSLPSDKHTL 523 (563)
Q Consensus 444 d~~~~~~~~~I~~l~~~gi~v~i~TGd~~~~a~~~a~~lgi~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~p~~K~~~ 523 (563)
.++.|++.+.++.|++.|+++.++|+... +....+.+|+......++.+.+. ......|+--..+
T Consensus 90 ~~~~~g~~~~l~~l~~~~~~i~i~s~~~~--~~~~l~~~~l~~~f~~i~~~~~~-------------~~~KP~~~~~~~~ 154 (221)
T d1o08a_ 90 ADVYPGILQLLKDLRSNKIKIALASASKN--GPFLLERMNLTGYFDAIADPAEV-------------AASKPAPDIFIAA 154 (221)
T ss_dssp GGBCTTHHHHHHHHHHTTCEEEECCSCTT--HHHHHHHTTCGGGCSEECCTTTS-------------SSCTTSTHHHHHH
T ss_pred ccccCCceeccccccccccceEEEeecch--hhHHHHhhccccccccccccccc-------------cccccChHHHHHH
Confidence 34778999999999999999999999754 57788899987654444444332 1122233333444
Q ss_pred HHHHHHhcCCEEEEEcCCccCHHHHhhCCc-eEeec
Q 044020 524 VTQLRNTFGEVVAVTGDGTNDASALHEADI-GLAMG 558 (563)
Q Consensus 524 v~~l~~~~g~~v~~iGDg~ND~~~l~~a~v-giamg 558 (563)
++.++-. ++.+++|||+.+|+.+-+.||+ .|.++
T Consensus 155 l~~~~i~-~~~~l~VgD~~~di~~A~~aG~~~i~v~ 189 (221)
T d1o08a_ 155 AHAVGVA-PSESIGLEDSQAGIQAIKDSGALPIGVG 189 (221)
T ss_dssp HHHTTCC-GGGEEEEESSHHHHHHHHHHTCEEEEES
T ss_pred HHHcCCC-CceEEEEecCHHHHHHHHHcCCEEEEEC
Confidence 4444443 5789999999999999999998 55554
|
| >d1x42a1 c.108.1.1 (A:1-230) Hypothetical protein PH0459 {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: Hypothetical protein PH0459 species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=97.15 E-value=0.00028 Score=63.46 Aligned_cols=95 Identities=17% Similarity=0.160 Sum_probs=68.5
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCceeechhhhcCCCCCCCcceeEEEecChhhHHHHH
Q 044020 445 PVRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAKECGILTSDGEAVEGPEFRNMSPADIIPKLQVMARSLPSDKHTLV 524 (563)
Q Consensus 445 ~~~~~~~~~I~~l~~~gi~v~i~TGd~~~~a~~~a~~lgi~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v 524 (563)
++.|++.++++.|+ +|++++++|+.+........+.+|+......++...+.. .....|+--..++
T Consensus 100 ~~~p~~~~~L~~l~-~~~~i~i~Sn~~~~~~~~~l~~~gl~~~fd~i~~s~~~~-------------~~KP~~~~~~~~~ 165 (230)
T d1x42a1 100 ELYPEVVEVLKSLK-GKYHVGMITDSDTEYLMAHLDALGIKDLFDSITTSEEAG-------------FFKPHPRIFELAL 165 (230)
T ss_dssp CBCTTHHHHHHHHB-TTBEEEEEESSCHHHHHHHHHHHTCGGGCSEEEEHHHHT-------------BCTTSHHHHHHHH
T ss_pred cccccHHHHHHHhh-ccCceeeeeccccccchhhhccccccccccccccccccc-------------ccchhhHHHHHHH
Confidence 46799999999996 579999999999999999999999976444444433321 1112233334444
Q ss_pred HHHHHhcCCEEEEEcCC-ccCHHHHhhCCce
Q 044020 525 TQLRNTFGEVVAVTGDG-TNDASALHEADIG 554 (563)
Q Consensus 525 ~~l~~~~g~~v~~iGDg-~ND~~~l~~a~vg 554 (563)
+.+.-. ++.+++|||. .+|+.+-+.+|+.
T Consensus 166 ~~l~~~-p~~~l~vgD~~~~Di~~A~~~G~~ 195 (230)
T d1x42a1 166 KKAGVK-GEEAVYVGDNPVKDCGGSKNLGMT 195 (230)
T ss_dssp HHHTCC-GGGEEEEESCTTTTHHHHHTTTCE
T ss_pred hhhccc-ccccceeecCcHhHHHHHHHcCCE
Confidence 555443 4789999998 5899999999984
|
| >d2fi1a1 c.108.1.3 (A:4-190) Putative hydrolase SP0805 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphonoacetaldehyde hydrolase-like domain: Putative hydrolase SP0805 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=97.09 E-value=0.00028 Score=61.36 Aligned_cols=93 Identities=18% Similarity=0.093 Sum_probs=64.7
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCceeechhhhcCCCCCCCcceeEEEecChhhHHHHH
Q 044020 445 PVRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAKECGILTSDGEAVEGPEFRNMSPADIIPKLQVMARSLPSDKHTLV 524 (563)
Q Consensus 445 ~~~~~~~~~I~~l~~~gi~v~i~TGd~~~~a~~~a~~lgi~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v 524 (563)
.+.+++.+.++.|++.|+++.++|+.+... ....+.+++......++.+.+.. .....|+--..++
T Consensus 79 ~~~~gv~~~l~~l~~~g~~~~i~Sn~~~~~-~~~l~~~~l~~~fd~i~~~~~~~-------------~~KP~p~~~~~~~ 144 (187)
T d2fi1a1 79 ILFEGVSDLLEDISNQGGRHFLVSHRNDQV-LEILEKTSIAAYFTEVVTSSSGF-------------KRKPNPESMLYLR 144 (187)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCTHH-HHHHHHTTCGGGEEEEECGGGCC-------------CCTTSCHHHHHHH
T ss_pred cccchhHHHHHHHHhhhccccccccCccch-hhhhhhhcccccccccccccccc-------------ccCCCHHHHHHHH
Confidence 367899999999999999999999987655 45788999876433444333211 1112233333333
Q ss_pred HHHHHhcCCEEEEEcCCccCHHHHhhCCce
Q 044020 525 TQLRNTFGEVVAVTGDGTNDASALHEADIG 554 (563)
Q Consensus 525 ~~l~~~~g~~v~~iGDg~ND~~~l~~a~vg 554 (563)
+.+. .+.+++|||..+|+.+-+.||+-
T Consensus 145 ~~~~---~~~~l~vgDs~~Di~aA~~aG~~ 171 (187)
T d2fi1a1 145 EKYQ---ISSGLVIGDRPIDIEAGQAAGLD 171 (187)
T ss_dssp HHTT---CSSEEEEESSHHHHHHHHHTTCE
T ss_pred HHcC---CCCeEEEeCCHHHHHHHHHcCCE
Confidence 4332 25699999999999999999985
|
| >d1yv9a1 c.108.1.14 (A:4-256) Putative hydrolase EF1188 {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Putative hydrolase EF1188 species: Enterococcus faecalis [TaxId: 1351]
Probab=96.97 E-value=0.00013 Score=66.91 Aligned_cols=39 Identities=18% Similarity=0.235 Sum_probs=30.2
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHc
Q 044020 444 DPVRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAKEC 482 (563)
Q Consensus 444 d~~~~~~~~~I~~l~~~gi~v~i~TGd~~~~a~~~a~~l 482 (563)
+..-+++.++|++|+++|++++++|+++..+...+++++
T Consensus 17 ~~~i~~a~~~i~~l~~~g~~~~~~Tn~s~~~~~~~~~~L 55 (253)
T d1yv9a1 17 KEPIPAGKRFVERLQEKDLPFLFVTNNTTKSPETVAQRL 55 (253)
T ss_dssp TEECHHHHHHHHHHHHTTCCEEEEECCCSSCHHHHHHHH
T ss_pred CCcCccHHHHHHHHHHCCCCEEEEeCCCCCCHHHHHHHH
Confidence 333478999999999999999999987766566555543
|
| >d2gfha1 c.108.1.6 (A:1-247) N-acylneuraminate-9-phosphatase NANP {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: N-acylneuraminate-9-phosphatase NANP species: Mouse (Mus musculus) [TaxId: 10090]
Probab=96.85 E-value=0.00068 Score=61.47 Aligned_cols=94 Identities=17% Similarity=0.147 Sum_probs=68.3
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCceeechhhhcCCCCCCCcceeEEEecChhhHHHHHH
Q 044020 446 VRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAKECGILTSDGEAVEGPEFRNMSPADIIPKLQVMARSLPSDKHTLVT 525 (563)
Q Consensus 446 ~~~~~~~~I~~l~~~gi~v~i~TGd~~~~a~~~a~~lgi~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~ 525 (563)
+.|++.++++.|++ |++++++|+.+........+.+|+......++...+.. ....+|+--..+++
T Consensus 110 ~~~~~~~~L~~L~~-~~~l~i~Tn~~~~~~~~~l~~~gl~~~fd~i~~s~~~~-------------~~KP~p~~~~~~~~ 175 (247)
T d2gfha1 110 LADDVKAMLTELRK-EVRLLLLTNGDRQTQREKIEACACQSYFDAIVIGGEQK-------------EEKPAPSIFYHCCD 175 (247)
T ss_dssp CCHHHHHHHHHHHT-TSEEEEEECSCHHHHHHHHHHHTCGGGCSEEEEGGGSS-------------SCTTCHHHHHHHHH
T ss_pred cCccHHHHHHHhhc-ccceEEeecccchhhhhhhhhccccccccccccccccc-------------cchhhhhhHHHHHH
Confidence 67999999999984 89999999999999999999999876444444333321 11222333334444
Q ss_pred HHHHhcCCEEEEEcCCc-cCHHHHhhCCce
Q 044020 526 QLRNTFGEVVAVTGDGT-NDASALHEADIG 554 (563)
Q Consensus 526 ~l~~~~g~~v~~iGDg~-ND~~~l~~a~vg 554 (563)
.+.-. .+.+++|||.. +|+.+-+.+|+.
T Consensus 176 ~~~~~-~~~~l~iGD~~~~Di~~A~~~G~~ 204 (247)
T d2gfha1 176 LLGVQ-PGDCVMVGDTLETDIQGGLNAGLK 204 (247)
T ss_dssp HHTCC-GGGEEEEESCTTTHHHHHHHTTCS
T ss_pred HhhcC-HHhcceeccChHhHHHHHHHcCCe
Confidence 44443 46899999996 899999999995
|
| >d2a29a1 d.220.1.1 (A:316-451) Potassium-transporting ATPase B chain, KdpB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Potassium-transporting ATPase B chain, KdpB species: Escherichia coli [TaxId: 562]
Probab=96.67 E-value=0.0017 Score=53.02 Aligned_cols=106 Identities=18% Similarity=0.287 Sum_probs=66.8
Q ss_pred CCccHHHHHHHHHHcCCChHHHhhhceEEEEecCCCCceeEEEEEEcCCCeEEEEEeCChhHHHhcccccccCCCccccC
Q 044020 311 GTPTESAILEFGLRLGGDFEAQRREFKIVKVEPFNSVRKKMSVLIALPAGGMRAFCKGASEIVLSMCDKVVSDNGEPVPL 390 (563)
Q Consensus 311 ~~~~e~al~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~sviv~~~~~~~~~~~kG~~~~il~~c~~~~~~~~~~~~~ 390 (563)
.||+.+||+++|++.+.... ....+.-....||....+...+.+. + ..+..|++..+...... .+. .+
T Consensus 30 eHPlakAIv~~Ak~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~~~~---g--~~v~~G~~~~~~~~~~~----~g~--~~ 97 (136)
T d2a29a1 30 ETPEGRSIVILAKQRFNLRE-RDVQSLHATFVPFTAQSRMSGINID---N--RMIRKGSVDAIRRHVEA----NGG--HF 97 (136)
T ss_dssp CSHHHHHHHHHHHHHHCCCC-CCTTTTTCEEEEEETTTTEEEEEET---T--EEEEEECHHHHHHHHHH----HTC--CC
T ss_pred CchHHHHHHHHHHHhcCCCc-cccccccccccccccccceEEEEEC---C--EEEEecHHHHHHHHHHH----cCC--CC
Confidence 49999999999987643221 1112223344566655554443321 2 34557888777544321 011 12
Q ss_pred CHHHHHHHHHHHHHHHHHHHhHhHhhhhccCCCCCCCCCCCCCceEEEEecccCCCC
Q 044020 391 SEEQFRNITDVINGFASEALRTLCLAFKDLNDSSNENNIPDSGYTLIAVVGIKDPVR 447 (563)
Q Consensus 391 ~~~~~~~i~~~~~~~~~~G~r~i~~a~~~l~~~~~~~~~~~~~~~~lG~i~~~d~~~ 447 (563)
+ ..+.+..+.+..+|.+++.+| .|..++|+|.+.|+++
T Consensus 98 ~----~~~~~~~~~~~~~G~Tvv~Va---------------~d~~~~G~i~l~D~iK 135 (136)
T d2a29a1 98 P----TDVDQKVDQVARQGATPLVVV---------------EGSRVLGVIALKDIVK 135 (136)
T ss_dssp C----HHHHHHHHHHHHTTSEEEEEE---------------ETTEEEEEEEEEESSC
T ss_pred c----HHHHHHHHHHHHCCCeEEEEE---------------ECCEEEEEEEEEeecC
Confidence 2 345677888999999999988 4559999999999986
|
| >d2b82a1 c.108.1.12 (A:4-212) Class B acid phosphatase, AphA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Class B acid phosphatase, AphA domain: Class B acid phosphatase, AphA species: Escherichia coli [TaxId: 562]
Probab=96.64 E-value=0.00081 Score=58.55 Aligned_cols=88 Identities=16% Similarity=0.265 Sum_probs=61.4
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCCH----HHHHHHHHHcCCCCCCCceeechhhhcCCCCCCCcceeEEEec--Chhh
Q 044020 446 VRPGVKEAVQTCLEAGITVRMVTGDNI----NTARAIAKECGILTSDGEAVEGPEFRNMSPADIIPKLQVMARS--LPSD 519 (563)
Q Consensus 446 ~~~~~~~~I~~l~~~gi~v~i~TGd~~----~~a~~~a~~lgi~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~--~p~~ 519 (563)
+.|++++.++.+++.|++|+.+|||.. .++..+.+.+|+...... ..++..- ....
T Consensus 87 p~pga~~fl~~~~~~Gv~IfyVTnR~~~~~e~T~~nL~K~lG~p~~~~~------------------~vll~~~~~~K~~ 148 (209)
T d2b82a1 87 PKEVARQLIDMHVRRGDAIFFVTGRSPTKTETVSKTLADNFHIPATNMN------------------PVIFAGDKPGQNT 148 (209)
T ss_dssp ECHHHHHHHHHHHHHTCEEEEEECSCCCSSCCHHHHHHHHTTCCTTTBC------------------CCEECCCCTTCCC
T ss_pred cchhHHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHHHHHcCCCccccc------------------ceEeeCCCCCchH
Confidence 567999999999999999999999974 355666677898642100 0122221 1233
Q ss_pred HHHHHHHHHHhcCCEEEEEcCCccCHHHHhhCCc-eEe
Q 044020 520 KHTLVTQLRNTFGEVVAVTGDGTNDASALHEADI-GLA 556 (563)
Q Consensus 520 K~~~v~~l~~~~g~~v~~iGDg~ND~~~l~~a~v-gia 556 (563)
|...++. + +.++++||..+|+.+-+.|++ +|-
T Consensus 149 rr~~Ik~---y--~I~l~~GD~l~Df~aA~eagi~~iR 181 (209)
T d2b82a1 149 KSQWLQD---K--NIRIFYGDSDNDITAARDVGARGIR 181 (209)
T ss_dssp SHHHHHH---T--TEEEEEESSHHHHHHHHHTTCEEEE
T ss_pred HHHHHHH---c--CeEEEecCCHHHHhHHHHcCCCceE
Confidence 5555542 3 589999999999999999986 443
|
| >d2c4na1 c.108.1.14 (A:1-250) NagD {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: NagD species: Escherichia coli [TaxId: 562]
Probab=96.56 E-value=0.00062 Score=62.16 Aligned_cols=48 Identities=13% Similarity=0.210 Sum_probs=37.8
Q ss_pred ecccCCCCcchHHHHHHHHhCCCeEEEEc---CCCHHHHHHHHHHcCCCCC
Q 044020 440 VGIKDPVRPGVKEAVQTCLEAGITVRMVT---GDNINTARAIAKECGILTS 487 (563)
Q Consensus 440 i~~~d~~~~~~~~~I~~l~~~gi~v~i~T---Gd~~~~a~~~a~~lgi~~~ 487 (563)
+.-.+.+-+++.++|+.|+++|++++++| ++.+.......+++|+.-+
T Consensus 14 L~~~~~~i~~a~e~i~~l~~~g~~~~~~TN~~~~~~~~~~~~l~~~G~~~~ 64 (250)
T d2c4na1 14 LMHDNVAVPGAAEFLHGIMDKGLPLVLLTNYPSQTGQDLANRFATAGVDVP 64 (250)
T ss_dssp TEETTEECTTHHHHHHHHHHTTCCEEEEESCCSCCHHHHHHHHHHTTCCCC
T ss_pred eEECCCcCccHHHHHHHHHHCCCcEEEEeCCCCCCHHHHHHHHhhcccccc
Confidence 33344455789999999999999999998 5677777777788898654
|
| >d2o2xa1 c.108.1.19 (A:8-216) Hypothetical protein Mll2559 {Mesorhizobium loti [TaxId: 381]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: Hypothetical protein Mll2559 species: Mesorhizobium loti [TaxId: 381]
Probab=96.54 E-value=0.00074 Score=59.68 Aligned_cols=109 Identities=18% Similarity=0.142 Sum_probs=60.2
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCC--------H-------HHHHHHHHHcCCCCCCCceeechhhhcCCCCCCCcce
Q 044020 445 PVRPGVKEAVQTCLEAGITVRMVTGDN--------I-------NTARAIAKECGILTSDGEAVEGPEFRNMSPADIIPKL 509 (563)
Q Consensus 445 ~~~~~~~~~I~~l~~~gi~v~i~TGd~--------~-------~~a~~~a~~lgi~~~~~~~~~g~~~~~~~~~~~~~~~ 509 (563)
.+-|++.++|++|+++|++++++|..+ . .......+..|+.-. .++.......... ....+-
T Consensus 48 ~l~pgv~e~L~~L~~~G~~l~IvTNQ~gi~~g~~~~~~~~~~~~~~~~~l~~~g~~~~--~~~~~~~~~~~~~-~~~~~~ 124 (209)
T d2o2xa1 48 VLRPQMLPAIATANRAGIPVVVVTNQSGIARGYFGWSAFAAVNGRVLELLREEGVFVD--MVLACAYHEAGVG-PLAIPD 124 (209)
T ss_dssp CBCGGGHHHHHHHHHHTCCEEEEEECHHHHTTSCCHHHHHHHHHHHHHHHHHTTCCCS--EEEEECCCTTCCS-TTCCSS
T ss_pred EecccHHHHHHHHHhhCCeEEEecccccchhhhhhhhhhhhhhhHHHHHhhhcccccc--eEEEecccccccc-cccccc
Confidence 467999999999999999999999532 1 122333444443211 0000000000000 000000
Q ss_pred eEEEecChhhHHHHHHHHHHhcCCEEEEEcCCccCHHHHhhCCc-eEee
Q 044020 510 QVMARSLPSDKHTLVTQLRNTFGEVVAVTGDGTNDASALHEADI-GLAM 557 (563)
Q Consensus 510 ~v~~~~~p~~K~~~v~~l~~~~g~~v~~iGDg~ND~~~l~~a~v-giam 557 (563)
..+....|.--.++++.+.-. ...+.||||..+|+.+-+.||+ +|.+
T Consensus 125 ~~~rKP~p~ml~~a~~~~~i~-~~~~~~VGD~~~Di~aA~~AGi~~i~v 172 (209)
T d2o2xa1 125 HPMRKPNPGMLVEAGKRLALD-LQRSLIVGDKLADMQAGKRAGLAQGWL 172 (209)
T ss_dssp CTTSTTSCHHHHHHHHHHTCC-GGGCEEEESSHHHHHHHHHTTCSEEEE
T ss_pred cccccccchhhhHhHHHhCCC-ccceEEeCCCHHHHHHHHHCCCcEEEE
Confidence 001122333344555555544 4789999999999999999998 5554
|
| >d1zrna_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., strain YL [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: L-2-Haloacid dehalogenase, HAD species: Pseudomonas sp., strain YL [TaxId: 306]
Probab=96.51 E-value=0.0012 Score=58.41 Aligned_cols=98 Identities=7% Similarity=0.055 Sum_probs=74.7
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCceeechhhhcCCCCCCCcceeEEEecChhhHHHHH
Q 044020 445 PVRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAKECGILTSDGEAVEGPEFRNMSPADIIPKLQVMARSLPSDKHTLV 524 (563)
Q Consensus 445 ~~~~~~~~~I~~l~~~gi~v~i~TGd~~~~a~~~a~~lgi~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v 524 (563)
.+.+++.++++.+++.|+++.++|+-.........+..++......++...+.. .....|+--..++
T Consensus 93 ~~~~~~~~~l~~l~~~~~~~~i~tn~~~~~~~~~~~~~~~~~~fd~~~~s~~~~-------------~~KP~p~~~~~~~ 159 (220)
T d1zrna_ 93 APFSEVPDSLRELKRRGLKLAILSNGSPQSIDAVVSHAGLRDGFDHLLSVDPVQ-------------VYKPDNRVYELAE 159 (220)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSEEEESGGGT-------------CCTTSHHHHHHHH
T ss_pred cccchhHHHHHHHHhcCCeEEeecchHHHHHHHHHhhccccccccceeeeeeee-------------ccccHHHHHHHHH
Confidence 356889999999999999999999999999999999988876544444443321 1223344445566
Q ss_pred HHHHHhcCCEEEEEcCCccCHHHHhhCCceEe
Q 044020 525 TQLRNTFGEVVAVTGDGTNDASALHEADIGLA 556 (563)
Q Consensus 525 ~~l~~~~g~~v~~iGDg~ND~~~l~~a~vgia 556 (563)
+.+.-. .+++++|||..+|+.+-+.||+-.+
T Consensus 160 ~~~g~~-p~e~l~VgD~~~Di~~A~~aG~~~v 190 (220)
T d1zrna_ 160 QALGLD-RSAILFVASNAWDATGARYFGFPTC 190 (220)
T ss_dssp HHHTSC-GGGEEEEESCHHHHHHHHHHTCCEE
T ss_pred HHhCCC-CceEEEEecChHhHHHHHHcCCEEE
Confidence 666554 5889999999999999999998643
|
| >d2gmwa1 c.108.1.19 (A:24-205) D,D-heptose 1,7-bisphosphate phosphatase GmhB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: D,D-heptose 1,7-bisphosphate phosphatase GmhB species: Escherichia coli [TaxId: 562]
Probab=96.51 E-value=0.0021 Score=55.28 Aligned_cols=106 Identities=13% Similarity=0.051 Sum_probs=60.8
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHH---------------HHHHHHHcCCCCCCCceeechhhhcCCCCCCCcce
Q 044020 445 PVRPGVKEAVQTCLEAGITVRMVTGDNINT---------------ARAIAKECGILTSDGEAVEGPEFRNMSPADIIPKL 509 (563)
Q Consensus 445 ~~~~~~~~~I~~l~~~gi~v~i~TGd~~~~---------------a~~~a~~lgi~~~~~~~~~g~~~~~~~~~~~~~~~ 509 (563)
++-|++.++++.|+++|++++++|..+... ........|+.... ..+.....+... ....+.
T Consensus 27 ~~~~gv~e~l~~L~~~g~~~~ivTNq~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~cp~~p~~~~--~~~~~~ 103 (182)
T d2gmwa1 27 EFIDGVIDAMRELKKMGFALVVVTNQSGIARGKFTEAQFETLTEWMDWSLADRDVDLDG-IYYCPHHPQGSV--EEFRQV 103 (182)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEECTHHHHTSSCHHHHHHHHHHHHHHHHHTTCCCSE-EEEECCBTTCSS--GGGBSC
T ss_pred eECCCHHHHHHHHhhcCchhhhhhccchhhhhhhHHHhhhhhhhhhhhhhhhhcccccc-eeeccccccccc--cccccc
Confidence 356899999999999999999999976421 11222223332110 000000000000 000001
Q ss_pred eEEEecChhhHHHHHHHHHHhcCCEEEEEcCCccCHHHHhhCCce
Q 044020 510 QVMARSLPSDKHTLVTQLRNTFGEVVAVTGDGTNDASALHEADIG 554 (563)
Q Consensus 510 ~v~~~~~p~~K~~~v~~l~~~~g~~v~~iGDg~ND~~~l~~a~vg 554 (563)
..+....|.--..+++.+.-. .+.++||||..+|+.|-+.|+++
T Consensus 104 ~~~rKP~p~m~~~~~~~~~i~-~~~s~mVGDs~~Di~aA~~Ag~~ 147 (182)
T d2gmwa1 104 CDCRKPHPGMLLSARDYLHID-MAASYMVGDKLEDMQAAVAANVG 147 (182)
T ss_dssp CSSSTTSCHHHHHHHHHHTBC-GGGCEEEESSHHHHHHHHHTTCS
T ss_pred ccccCCccccccchhhhcccc-cccccccCCCHHHHHHHHHhCCC
Confidence 111233444555666666654 57899999999999999999985
|
| >d1cr6a1 c.108.1.2 (A:4-225) Epoxide hydrolase, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Epoxide hydrolase, N-terminal domain species: Mouse (Mus musculus) [TaxId: 10090]
Probab=96.39 E-value=0.0009 Score=59.38 Aligned_cols=99 Identities=13% Similarity=0.140 Sum_probs=69.6
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCC----CHHHHHHHHHHcCCCCCCCceeechhhhcCCCCCCCcceeEEEecChhhH
Q 044020 445 PVRPGVKEAVQTCLEAGITVRMVTGD----NINTARAIAKECGILTSDGEAVEGPEFRNMSPADIIPKLQVMARSLPSDK 520 (563)
Q Consensus 445 ~~~~~~~~~I~~l~~~gi~v~i~TGd----~~~~a~~~a~~lgi~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~p~~K 520 (563)
.+.+++.+.+.+|+++|+++.++|+. ............|+.+....++.+.+.. .....|+--
T Consensus 97 ~~~~~~~~~L~~L~~~~~~~~i~s~~~~~~~~~~~~~~~~~~~l~~~fd~i~~s~~~~-------------~~KP~p~~~ 163 (222)
T d1cr6a1 97 SINRPMLQAAIALKKKGFTTCIVTNNWLDDGDKRDSLAQMMCELSQHFDFLIESCQVG-------------MIKPEPQIY 163 (222)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEECCCCCCSSSHHHHHHHHHHHGGGCSEEEEHHHHS-------------CCTTCHHHH
T ss_pred CCCccHHHHHHHHHhcCCceEEeeccccccHHHHHHHHHHhcChHhhhceeeehhhcc-------------CCCCChHHH
Confidence 36799999999999999999999963 3334455566667655434444443321 122345555
Q ss_pred HHHHHHHHHhcCCEEEEEcCCccCHHHHhhCCc-eEee
Q 044020 521 HTLVTQLRNTFGEVVAVTGDGTNDASALHEADI-GLAM 557 (563)
Q Consensus 521 ~~~v~~l~~~~g~~v~~iGDg~ND~~~l~~a~v-giam 557 (563)
..+++.++-. .+.++||||..+|+.+-+.+|+ +|-+
T Consensus 164 ~~~~~~~~v~-p~~~l~IgD~~~Di~~A~~aG~~ti~V 200 (222)
T d1cr6a1 164 NFLLDTLKAK-PNEVVFLDDFGSNLKPARDMGMVTILV 200 (222)
T ss_dssp HHHHHHHTSC-TTSEEEEESSSTTTHHHHHHTCEEEEC
T ss_pred HHHHHHhCCC-cceEEEEECCHHHHHHHHHcCCEEEEE
Confidence 6666666655 6889999999999999999998 5544
|
| >d1vjra_ c.108.1.14 (A:) Hypothetical protein TM1742 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Hypothetical protein TM1742 species: Thermotoga maritima [TaxId: 2336]
Probab=96.21 E-value=0.0016 Score=59.70 Aligned_cols=45 Identities=20% Similarity=0.189 Sum_probs=36.0
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEc---CCCHHHHHHHHHHcCCCCCC
Q 044020 444 DPVRPGVKEAVQTCLEAGITVRMVT---GDNINTARAIAKECGILTSD 488 (563)
Q Consensus 444 d~~~~~~~~~I~~l~~~gi~v~i~T---Gd~~~~a~~~a~~lgi~~~~ 488 (563)
+++-+++.+++++|+++|++++++| +++........+++|+....
T Consensus 22 ~~~i~~a~e~l~~l~~~g~~~~~~TN~~~~~~~~~~~~~~~~g~~~~~ 69 (261)
T d1vjra_ 22 DSLLPGSLEFLETLKEKNKRFVFFTNNSSLGAQDYVRKLRNMGVDVPD 69 (261)
T ss_dssp TEECTTHHHHHHHHHHTTCEEEEEESCTTSCHHHHHHHHHHTTCCCCG
T ss_pred CccCchHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHHhhcccccc
Confidence 4445899999999999999999998 46677777777888986543
|
| >d2fpwa1 c.108.1.19 (A:3-163) Histidine biosynthesis bifunctional protein HisB, phosphatase domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: Histidine biosynthesis bifunctional protein HisB, phosphatase domain species: Escherichia coli [TaxId: 562]
Probab=96.12 E-value=0.0009 Score=56.45 Aligned_cols=102 Identities=16% Similarity=0.133 Sum_probs=58.6
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCC--------HH-------HHHHHHHHcCCCCCCCceeec-hhhhcCCCCCCCcc
Q 044020 445 PVRPGVKEAVQTCLEAGITVRMVTGDN--------IN-------TARAIAKECGILTSDGEAVEG-PEFRNMSPADIIPK 508 (563)
Q Consensus 445 ~~~~~~~~~I~~l~~~gi~v~i~TGd~--------~~-------~a~~~a~~lgi~~~~~~~~~g-~~~~~~~~~~~~~~ 508 (563)
.+-|++.++++.|+++|++++++|..+ .. .........|+.... ..+.. .....
T Consensus 30 ~~~pgv~e~L~~L~~~g~~l~i~TNq~~ia~~~~~~~~~~~~~~~l~~~l~~~~~~~~~-i~~~~~~~~~~--------- 99 (161)
T d2fpwa1 30 AFEPGVIPQLLKLQKAGYKLVMITNQDGLGTQSFPQADFDGPHNLMMQIFTSQGVQFDE-VLICPHLPADE--------- 99 (161)
T ss_dssp CBCTTHHHHHHHHHHTTEEEEEEEECTTTTSTTSCHHHHHHHHHHHHHHHHHTTCCEEE-EEEECCCGGGC---------
T ss_pred eECccHHHHHHHHHHcCCceeeecccccchhHHHHHHHhhhhhhhhhhhccccccccce-eeecccccccc---------
Confidence 467899999999999999999999753 11 123334444443200 00000 00000
Q ss_pred eeEEEecChhhHHHHHHHHHHhcCCEEEEEcCCccCHHHHhhCCc-eEeec
Q 044020 509 LQVMARSLPSDKHTLVTQLRNTFGEVVAVTGDGTNDASALHEADI-GLAMG 558 (563)
Q Consensus 509 ~~v~~~~~p~~K~~~v~~l~~~~g~~v~~iGDg~ND~~~l~~a~v-giamg 558 (563)
.-+....|.--..+++.+.-. .+.++||||...|+.|-+.||+ +|.++
T Consensus 100 -~~~~KP~p~~~~~~~~~~~id-~~~~~~IGD~~~Di~aA~~aG~~~i~i~ 148 (161)
T d2fpwa1 100 -CDCRKPKVKLVERYLAEQAMD-RANSYVIGDRATDIQLAENMGINGLRYD 148 (161)
T ss_dssp -CSSSTTSSGGGGGGC----CC-GGGCEEEESSHHHHHHHHHHTSEEEECB
T ss_pred -ccccccccHHHHHHHHhcCCC-hhcEEEECCCHHHHHHHHHcCCeEEEEC
Confidence 000122343334555555554 5789999999999999999999 44443
|
| >d1wvia_ c.108.1.14 (A:) Putative phosphatase SMU.1415c {Streptococcus mutans [TaxId: 1309]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Putative phosphatase SMU.1415c species: Streptococcus mutans [TaxId: 1309]
Probab=95.57 E-value=0.0028 Score=57.68 Aligned_cols=37 Identities=22% Similarity=0.205 Sum_probs=28.4
Q ss_pred HHHHHHHHHhcCCEEEEEcCCcc-CHHHHhhCCc-eEeec
Q 044020 521 HTLVTQLRNTFGEVVAVTGDGTN-DASALHEADI-GLAMG 558 (563)
Q Consensus 521 ~~~v~~l~~~~g~~v~~iGDg~N-D~~~l~~a~v-giamg 558 (563)
..+++.++.. .++++||||+.+ |+.+-++||+ +|.+.
T Consensus 187 ~~al~~l~i~-~~~~~mIGDs~~~DI~gA~~aG~~si~V~ 225 (253)
T d1wvia_ 187 NKALDRLGVK-RHEAIMVGDNYLTDITAGIKNDIATLLVT 225 (253)
T ss_dssp HHHHHHHTSC-GGGEEEEESCTTTTHHHHHHTTCEEEEES
T ss_pred eehhhhcccc-ccceEEEcCChHHHHHHHHHCCCCEEEEC
Confidence 3455555444 579999999965 9999999999 77765
|
| >d1zd3a1 c.108.1.2 (A:2-224) Epoxide hydrolase, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Epoxide hydrolase, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.52 E-value=0.0032 Score=55.45 Aligned_cols=99 Identities=12% Similarity=0.132 Sum_probs=62.7
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHH----HHHHHHcCCCCCCCceeechhhhcCCCCCCCcceeEEEecChhhH
Q 044020 445 PVRPGVKEAVQTCLEAGITVRMVTGDNINTA----RAIAKECGILTSDGEAVEGPEFRNMSPADIIPKLQVMARSLPSDK 520 (563)
Q Consensus 445 ~~~~~~~~~I~~l~~~gi~v~i~TGd~~~~a----~~~a~~lgi~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~p~~K 520 (563)
.+.+++.+++..|+++|++++++|....... .......++......++...+.. ....+|+--
T Consensus 99 ~~~~~~~~~l~~L~~~~~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~fd~i~~s~~~~-------------~~KP~~~~~ 165 (225)
T d1zd3a1 99 KINRPMLQAALMLRKKGFTTAILTNTWLDDRAERDGLAQLMCELKMHFDFLIESCQVG-------------MVKPEPQIY 165 (225)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEECCCCCCSTTHHHHHHHHHHHHTTSSEEEEHHHHT-------------CCTTCHHHH
T ss_pred CCCccHHHHHHHHHhccCccccccccchhhHHHHHHHHhhhcChHhhccEEEeccccc-------------cchhHHHHH
Confidence 3678999999999999999999997543322 22223334433223333332211 112233334
Q ss_pred HHHHHHHHHhcCCEEEEEcCCccCHHHHhhCCc-eEee
Q 044020 521 HTLVTQLRNTFGEVVAVTGDGTNDASALHEADI-GLAM 557 (563)
Q Consensus 521 ~~~v~~l~~~~g~~v~~iGDg~ND~~~l~~a~v-giam 557 (563)
..+++.+... .+++++|||...|+.+-+.+|+ +|.+
T Consensus 166 ~~~~~~~~~~-p~e~l~VgD~~~Di~~A~~~G~~ti~v 202 (225)
T d1zd3a1 166 KFLLDTLKAS-PSEVVFLDDIGANLKPARDLGMVTILV 202 (225)
T ss_dssp HHHHHHHTCC-GGGEEEEESCHHHHHHHHHTTCEEEEC
T ss_pred HHHhhhcccC-ccceeEEecCHHHHHHHHHcCCEEEEE
Confidence 4555555544 4789999999999999999999 5544
|
| >d1qq5a_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Xanthobacter autotrophicus [TaxId: 280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: L-2-Haloacid dehalogenase, HAD species: Xanthobacter autotrophicus [TaxId: 280]
Probab=95.33 E-value=0.0085 Score=53.58 Aligned_cols=94 Identities=11% Similarity=0.107 Sum_probs=70.4
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCceeechhhhcCCCCCCCcceeEEEecChhhHHHHH
Q 044020 445 PVRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAKECGILTSDGEAVEGPEFRNMSPADIIPKLQVMARSLPSDKHTLV 524 (563)
Q Consensus 445 ~~~~~~~~~I~~l~~~gi~v~i~TGd~~~~a~~~a~~lgi~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v 524 (563)
++.+++.+++++|+ ++.+.++|..+...+....+..|+......++.+.+.. .....|+--..++
T Consensus 93 ~~~~~~~~~L~~l~--~~~~~v~s~~~~~~~~~~~~~~~~~~~fd~v~~s~~~~-------------~~KP~p~~f~~a~ 157 (245)
T d1qq5a_ 93 TPYPDAAQCLAELA--PLKRAILSNGAPDMLQALVANAGLTDSFDAVISVDAKR-------------VFKPHPDSYALVE 157 (245)
T ss_dssp CBCTTHHHHHHHHT--TSEEEEEESSCHHHHHHHHHHTTCGGGCSEEEEGGGGT-------------CCTTSHHHHHHHH
T ss_pred ccchhhhHHHHHHh--hhceeEEeccchHHHHHHHhhccccccccccccccccc-------------ccCccHHHHHHHH
Confidence 46688999999885 67889999999999999999999877555555554432 1123344445566
Q ss_pred HHHHHhcCCEEEEEcCCccCHHHHhhCCce
Q 044020 525 TQLRNTFGEVVAVTGDGTNDASALHEADIG 554 (563)
Q Consensus 525 ~~l~~~~g~~v~~iGDg~ND~~~l~~a~vg 554 (563)
+.+.-. .+++++|||+.+|+.+=+.||+.
T Consensus 158 ~~lg~~-p~e~l~VgD~~~di~~A~~aG~~ 186 (245)
T d1qq5a_ 158 EVLGVT-PAEVLFVSSNGFDVGGAKNFGFS 186 (245)
T ss_dssp HHHCCC-GGGEEEEESCHHHHHHHHHHTCE
T ss_pred HHhCCC-hhhEEEEeCCHHHHHHHHHcCCe
Confidence 666554 57899999999999999999974
|
| >d2fdra1 c.108.1.6 (A:3-224) Hypothetical protein Atu0790 {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein Atu0790 species: Agrobacterium tumefaciens [TaxId: 358]
Probab=94.79 E-value=0.013 Score=51.53 Aligned_cols=98 Identities=11% Similarity=0.088 Sum_probs=65.7
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCCCCCc-eeechhhhcCCCCCCCcceeEEEecChhhHHHHH
Q 044020 446 VRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAKECGILTSDGE-AVEGPEFRNMSPADIIPKLQVMARSLPSDKHTLV 524 (563)
Q Consensus 446 ~~~~~~~~I~~l~~~gi~v~i~TGd~~~~a~~~a~~lgi~~~~~~-~~~g~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v 524 (563)
+.+++.+.+++++. +..++|+.....+....+++|+...... ++.+.+... -.+...|+.-...+
T Consensus 86 ~~~g~~~~L~~l~~---~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~-----------~~~KP~~~~~~~~~ 151 (222)
T d2fdra1 86 IIDGVKFALSRLTT---PRCICSNSSSHRLDMMLTKVGLKPYFAPHIYSAKDLGA-----------DRVKPKPDIFLHGA 151 (222)
T ss_dssp BCTTHHHHHHHCCS---CEEEEESSCHHHHHHHHHHTTCGGGTTTCEEEHHHHCT-----------TCCTTSSHHHHHHH
T ss_pred hhhhHHHHhhhccc---cceeeeecchhhhhhhhcccccccccceeecccccccc-----------cccccCHHHHHHHH
Confidence 67888888887764 4578999999999999999999864332 222222110 01122233334555
Q ss_pred HHHHHhcCCEEEEEcCCccCHHHHhhCCc-eEeec
Q 044020 525 TQLRNTFGEVVAVTGDGTNDASALHEADI-GLAMG 558 (563)
Q Consensus 525 ~~l~~~~g~~v~~iGDg~ND~~~l~~a~v-giamg 558 (563)
+.+.-. ++.+++|||+.+|+.+-+.||+ .|.+.
T Consensus 152 ~~l~~~-p~~~l~vgDs~~dv~aA~~aG~~~i~v~ 185 (222)
T d2fdra1 152 AQFGVS-PDRVVVVEDSVHGIHGARAAGMRVIGFT 185 (222)
T ss_dssp HHHTCC-GGGEEEEESSHHHHHHHHHTTCEEEEEC
T ss_pred HhhCCC-CceEEEEcCCHHHHHHHHHcCCEEEEEc
Confidence 555544 5789999999999999999997 34443
|
| >d2b0ca1 c.108.1.2 (A:8-204) Putative phosphatase YihX {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Putative phosphatase YihX species: Escherichia coli [TaxId: 562]
Probab=94.49 E-value=0.0011 Score=57.09 Aligned_cols=100 Identities=12% Similarity=0.115 Sum_probs=60.9
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHc-CCCCCCCceeechhhhcCCCCCCCcceeEEEecChhhHHHH
Q 044020 445 PVRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAKEC-GILTSDGEAVEGPEFRNMSPADIIPKLQVMARSLPSDKHTL 523 (563)
Q Consensus 445 ~~~~~~~~~I~~l~~~gi~v~i~TGd~~~~a~~~a~~l-gi~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~p~~K~~~ 523 (563)
++.++..+.+..++..|+++.++|+-+...+.....+. |+......++.+.+. -.....|+--..+
T Consensus 84 ~~~~~~~~l~~~l~~~~~~~~i~t~~~~~~~~~~~~~~~~l~~~fd~v~~s~~~-------------~~~Kp~~~~~~~~ 150 (197)
T d2b0ca1 84 ALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEIRDAADHIYLSQDL-------------GMRKPEARIYQHV 150 (197)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEECCCCCTTSCCGGGCHHHHHHCSEEEEHHHH-------------TCCTTCHHHHHHH
T ss_pred ccCchhHHHHHHHHhcCCeEEEEeCccHHHHHHHHHHcccchhhccceeecccc-------------cccccchHHHHHH
Confidence 36789999999999999999999986654443333322 222111112221111 0111223333344
Q ss_pred HHHHHHhcCCEEEEEcCCccCHHHHhhCCc-eEeec
Q 044020 524 VTQLRNTFGEVVAVTGDGTNDASALHEADI-GLAMG 558 (563)
Q Consensus 524 v~~l~~~~g~~v~~iGDg~ND~~~l~~a~v-giamg 558 (563)
++.++-. .+++++|||..+|+.+-+.||+ +|.+.
T Consensus 151 ~~~~~~~-~~~~l~vgDs~~di~~A~~aG~~ti~v~ 185 (197)
T d2b0ca1 151 LQAEGFS-PSDTVFFDDNADNIEGANQLGITSILVK 185 (197)
T ss_dssp HHHHTCC-GGGEEEEESCHHHHHHHHTTTCEEEECC
T ss_pred HHhcCCC-CCeEEEEeCCHHHHHHHHHcCCEEEEEC
Confidence 4444433 4789999999999999999998 66554
|
| >d2obba1 c.108.1.25 (A:1-122) Hypothetical protein BT0820 {Bacteroides thetaiotaomicron [TaxId: 818]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: BT0820-like domain: Hypothetical protein BT0820 species: Bacteroides thetaiotaomicron [TaxId: 818]
Probab=86.99 E-value=0.41 Score=37.18 Aligned_cols=42 Identities=7% Similarity=-0.052 Sum_probs=32.9
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCCHHHH---HHHHHHcCCC
Q 044020 444 DPVRPGVKEAVQTCLEAGITVRMVTGDNINTA---RAIAKECGIL 485 (563)
Q Consensus 444 d~~~~~~~~~I~~l~~~gi~v~i~TGd~~~~a---~~~a~~lgi~ 485 (563)
.++.+++.+.|++|++.|.++++.|+|+.... ...+++-|+.
T Consensus 20 ~kPi~~~Ie~l~~L~~~G~~IIi~TaR~~~~~~~t~~wL~~~~i~ 64 (122)
T d2obba1 20 GEEIPFAVETLKLLQQEKHRLILWSVREGELLDEAIEWCRARGLE 64 (122)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEECCSCCHHHHHHHHHHHHTTTCC
T ss_pred ccccHHHHHHHHHHHHCCCeEEEEecCCCcchHHHHHHHHHcCCC
Confidence 35778999999999999999999999987553 4444555553
|
| >d2b8ea2 d.220.1.1 (A:435-547) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Cation-transporting ATPase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=84.64 E-value=1.6 Score=33.12 Aligned_cols=84 Identities=15% Similarity=0.244 Sum_probs=52.5
Q ss_pred CCccHHHHHHHHHHcCCChHHHhhhceEEEEecCCCCceeEEEEEEcCCCeEEE--EEeCChhHHHhcccccccCCCccc
Q 044020 311 GTPTESAILEFGLRLGGDFEAQRREFKIVKVEPFNSVRKKMSVLIALPAGGMRA--FCKGASEIVLSMCDKVVSDNGEPV 388 (563)
Q Consensus 311 ~~~~e~al~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~sviv~~~~~~~~~--~~kG~~~~il~~c~~~~~~~~~~~ 388 (563)
.||...|+++++++.+...... ..|. ..++.++.. +.-|++..+.+..-
T Consensus 27 ~HPlA~AIv~~a~~~~~~~~~~---------~~~~----------~~~G~Gi~g~~v~vG~~~~~~~~~~---------- 77 (113)
T d2b8ea2 27 EHPIAEAIVKKALEHGIELGEP---------EKVE----------VIAGEGVVADGILVGNKRLMEDFGV---------- 77 (113)
T ss_dssp CSHHHHHHHHHHHTTTCCCCCC---------SCEE----------EETTTEEEETTEEEECHHHHHHTTC----------
T ss_pred CCchHHHHHHHHHHhcCCCCcc---------ccce----------eeccceEEeEEEEECcHHHHHhcCC----------
Confidence 4999999999998766432211 1111 123444332 33488777754321
Q ss_pred cCCHHHHHHHHHHHHHHHHHHHhHhHhhhhccCCCCCCCCCCCCCceEEEEecc
Q 044020 389 PLSEEQFRNITDVINGFASEALRTLCLAFKDLNDSSNENNIPDSGYTLIAVVGI 442 (563)
Q Consensus 389 ~~~~~~~~~i~~~~~~~~~~G~r~i~~a~~~l~~~~~~~~~~~~~~~~lG~i~~ 442 (563)
.+++ .+.+.+..+..+|..++.++. |..++|+|++
T Consensus 78 ~~~~----~~~~~~~~~~~~G~T~v~va~---------------d~~~~G~ial 112 (113)
T d2b8ea2 78 AVSN----EVELALEKLEREAKTAVIVAR---------------NGRVEGIIAV 112 (113)
T ss_dssp CCCH----HHHHHHHHHHTTTCEEEEEEE---------------TTEEEEEEEE
T ss_pred CCCH----HHHHHHHHHHhCCCeEEEEEE---------------CCEEEEEEEE
Confidence 1222 456778888999999998884 4489999876
|
| >d1y8aa1 c.108.1.24 (A:1-308) Hypothetical protein AF1437 {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: AF1437-like domain: Hypothetical protein AF1437 species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=83.07 E-value=1.3 Score=38.24 Aligned_cols=39 Identities=21% Similarity=0.199 Sum_probs=33.4
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCC
Q 044020 446 VRPGVKEAVQTCLEAGITVRMVTGDNINTARAIAKECGIL 485 (563)
Q Consensus 446 ~~~~~~~~I~~l~~~gi~v~i~TGd~~~~a~~~a~~lgi~ 485 (563)
+-|++.++++.+++. ....++|-.-.+=+.++|+.+|+.
T Consensus 82 lvpgA~~~lk~l~~~-m~~yIvSTSY~qyi~al~~~~gfp 120 (308)
T d1y8aa1 82 FVPDAEKAMATLQER-WTPVVISTSYTQYLRRTASMIGVR 120 (308)
T ss_dssp BCTTHHHHHHHHHTT-CEEEEEEEEEHHHHHHHHHHTTCC
T ss_pred ecCCHHHHHHHHHhh-CCcEEEeccHHHHHHHHHhhcCCC
Confidence 678999999999998 677777766778889999999996
|