Citrus Sinensis ID: 044059


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220---
GAQLIVVNNCQENLWPGILGGAGHPTPNNGGFKLSSGEEVVLDVPEKWSGRIWGRQGCRFDSNGKGSCDTGDCSAQLHCQGTGGAPPATVVEMTLGSSASPLHFYDVSLVDGFNLPVSMKPVGGGIGCGVASCDADLNICCPSALEVKVGGKVVGCKSACLAMQSAKYCCTGQYANPKTCKPTLFANLFKAICPKAYSYAFDDSSSLNKCRASRYVITFCPPK
ccEEEEEEccccccccEEEccccccccccccEEcccccEEEEEccccccccEEcccccccccccccccccccccccEEEccccccccccEEEEEEccccccccEEEEEEEcccccccccccccccccccccccccccccccccccccccccEEEEEccHHHHcccccccccccccccccccccHHHHHHHHcccccEEEccccccccEEEccccEEEEEcccc
ccEEEEEEcccccEcccEcccccccccccccEEcccccEEEEEccccccEEEEEEEEEEEccccEEEEEEcccccEccccccccccccEEEEEEEccccccEEEEEEEccccEcccEEEEEcccccccccccccccHHHHccHHHEEcccccEEEEcHHHHHHccccccccccccccccccccHHHHHHHHHccccEEEEcccccccEEcccccEEEEEcccc
GAQLIVVNNcqenlwpgilggaghptpnnggfklssgeevvldvpekwsgriwgrqgcrfdsngkgscdtgdcsaqlhcqgtggappaTVVEMtlgssasplhfydvslvdgfnlpvsmkpvgggigcgvascdadlniccpsalevkvggkvvGCKSACLAMQSAkycctgqyanpktckptLFANLFKAicpkaysyafddssslnkcrasryvitfcppk
GAQLIVVNNCQENLWPGILGGAGHPTPNNGGFKLSSGEEVVLDVPEKWSGRIWGRQGCRFDSNGKGSCDTGDCSAQLHCQGTGGAPPATVVEMTLGSSASPLHFYDVSLVDGFNLPVSMKPVGGGIGCGVASCDADLNICCPSALEVKVGGKVVGCKSACLAMQSAKYCCTGQYANPKTCKPTLFANLFKAICPKAYSyafddssslnkcrasryvitfcppk
GAQLIVVNNCQENLWPGILGGAGHPTPNNGGFKLSSGEEVVLDVPEKWSGRIWGRQGCRFDSNGKGSCDTGDCSAQLHCQGTGGAPPATVVEMTLGSSASPLHFYDVSLVDGFNLPVSMKPVGGGIGCGVASCDADLNICCPSALEvkvggkvvgckSACLAMQSAKYCCTGQYANPKTCKPTLFANLFKAICPKAYSYAFDDSSSLNKCRASRYVITFCPPK
***LIVVNNCQENLWPGILGGAGHP****GGFKLSSGEEVVLDVPEKWSGRIWGRQGCRFDSNGKGSCDTGDCSAQLHCQGTGGAPPATVVEMTLGSSASPLHFYDVSLVDGFNLPVSMKPVGGGIGCGVASCDADLNICCPSALEVKVGGKVVGCKSACLAMQSAKYCCTGQYANPKTCKPTLFANLFKAICPKAYSYAFDDSSSLNKCRASRYVITFC***
GAQLIVVNNCQENLWPGILGGAGHPTPNNGGFKLSSGEEVVLDVPEKWSGRIWGRQGCRFDSNGKGSCDTGDCSAQLHCQGTGGAPPATVVEMTLGSSASPLHFYDVSLVDGFNLPVSMKPVGGGIGCGVASCDADLNICCPSALEVKVGGKVVGCKSACLAMQSAKYCCTGQYANPKTCKPTLFANLFKAICPKAYSYAFDDSSSLNKCRASRYVITFCPP*
GAQLIVVNNCQENLWPGILGGAGHPTPNNGGFKLSSGEEVVLDVPEKWSGRIWGRQGCRFDSNGKGSCDTGDCSAQLHCQGTGGAPPATVVEMTLGSSASPLHFYDVSLVDGFNLPVSMKPVGGGIGCGVASCDADLNICCPSALEVKVGGKVVGCKSACLAMQSAKYCCTGQYANPKTCKPTLFANLFKAICPKAYSYAFDDSSSLNKCRASRYVITFCPPK
*AQLIVVNNCQENLWPGILGGAGHPTPNNGGFKLSSGEEVVLDVPEKWSGRIWGRQGCRFDSNGKGSCDTGDCSAQLHCQGTGGAPPATVVEMTLGSSASPLHFYDVSLVDGFNLPVSMKPVGGGIGCGVASCDADLNICCPSALEVKVGGKVVGCKSACLAMQSAKYCCTGQYANPKTCKPTLFANLFKAICPKAYSYAFDDSSSLNKCRASRYVITFCPPK
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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GAQLIVVNNCQENLWPGILGGAGHPTPNNGGFKLSSGEEVVLDVPEKWSGRIWGRQGCRFDSNGKGSCDTGDCSAQLHCQGTGGAPPATVVEMTLGSSASPLHFYDVSLVDGFNLPVSMKPVGGGIGCGVASCDADLNICCPSALEVKVGGKVVGCKSACLAMQSAKYCCTGQYANPKTCKPTLFANLFKAICPKAYSYAFDDSSSLNKCRASRYVITFCPPK
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query223 2.2.26 [Sep-21-2011]
Q53MB8253 Thaumatin-like protein OS no no 0.991 0.873 0.675 3e-83
P50699243 Thaumatin-like protein OS no no 0.973 0.893 0.509 8e-61
P83332246 Thaumatin-like protein 1 N/A no 0.986 0.894 0.486 1e-53
Q9FSG7246 Thaumatin-like protein 1a N/A no 0.986 0.894 0.477 2e-53
O80327244 Thaumatin-like protein 1 N/A no 0.982 0.897 0.506 8e-52
P83336212 Thaumatin-like protein 1b N/A no 0.932 0.981 0.485 7e-51
P28493239 Pathogenesis-related prot no no 0.964 0.899 0.465 1e-49
Q9SMH2243 Thaumatin-like protein 1 N/A no 0.977 0.897 0.457 2e-49
P50694245 Glucan endo-1,3-beta-gluc N/A no 0.986 0.897 0.450 3e-47
P83335242 Thaumatin-like protein 2 N/A no 0.964 0.888 0.455 2e-46
>sp|Q53MB8|TLPH_ORYSJ Thaumatin-like protein OS=Oryza sativa subsp. japonica GN=Os11g0706600 PE=2 SV=1 Back     alignment and function desciption
 Score =  308 bits (788), Expect = 3e-83,   Method: Compositional matrix adjust.
 Identities = 150/222 (67%), Positives = 182/222 (81%), Gaps = 1/222 (0%)

Query: 3   QLIVVNNCQENLWPGILGGAGHPTPNNGGFKLSSGEEVVLDVPEKWSGRIWGRQGCRFDS 62
           QLI+VNNC E++WPG+LG AGHPTP +GGF L +GEE  L+VP  WSGR+W R+GC FDS
Sbjct: 30  QLIMVNNCGESVWPGLLGTAGHPTPQSGGFHLGAGEEAALEVPAGWSGRVWPRRGCSFDS 89

Query: 63  NGKGSCDTGDCSAQLHCQGTGGAPPATVVEMTLGSSASPLHFYDVSLVDGFNLPVSMKPV 122
            G+GSC TGDC   L C G  GA PATVVEMTLG+SAS +HFYDVSLVDGFN PVSM  V
Sbjct: 90  RGRGSCATGDCGGVLRCNGAAGATPATVVEMTLGTSASAMHFYDVSLVDGFNAPVSMAAV 149

Query: 123 GGGIGCGVASCDADLNICCPSALEVK-VGGKVVGCKSACLAMQSAKYCCTGQYANPKTCK 181
           GGG+GCG A+C AD+N+CCPSALEV+   G+V GC+SAC AM   +YCCTG YA+P  C+
Sbjct: 150 GGGVGCGTAACGADVNVCCPSALEVRDREGRVAGCRSACRAMGGDRYCCTGDYASPSACR 209

Query: 182 PTLFANLFKAICPKAYSYAFDDSSSLNKCRASRYVITFCPPK 223
           PT+F++LFKAICP+AYSYA+DD++SLN+C A RY+ITFCPP+
Sbjct: 210 PTIFSHLFKAICPRAYSYAYDDATSLNRCHAKRYLITFCPPQ 251





Oryza sativa subsp. japonica (taxid: 39947)
>sp|P50699|TLPH_ARATH Thaumatin-like protein OS=Arabidopsis thaliana GN=At1g18250 PE=2 SV=2 Back     alignment and function description
>sp|P83332|TLP1_PRUPE Thaumatin-like protein 1 OS=Prunus persica PE=2 SV=1 Back     alignment and function description
>sp|Q9FSG7|TP1A_MALDO Thaumatin-like protein 1a OS=Malus domestica GN=TL1 PE=1 SV=1 Back     alignment and function description
>sp|O80327|TLP1_PYRPY Thaumatin-like protein 1 OS=Pyrus pyrifolia GN=TL1 PE=1 SV=1 Back     alignment and function description
>sp|P83336|TP1B_MALDO Thaumatin-like protein 1b (Fragment) OS=Malus domestica PE=2 SV=1 Back     alignment and function description
>sp|P28493|PR5_ARATH Pathogenesis-related protein 5 OS=Arabidopsis thaliana GN=At1g75040 PE=1 SV=1 Back     alignment and function description
>sp|Q9SMH2|TLP1_CASSA Thaumatin-like protein 1 OS=Castanea sativa GN=TL1 PE=2 SV=1 Back     alignment and function description
>sp|P50694|TLP_PRUAV Glucan endo-1,3-beta-glucosidase OS=Prunus avium PE=1 SV=1 Back     alignment and function description
>sp|P83335|TLP2_PRUPE Thaumatin-like protein 2 OS=Prunus persica PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query223
359481759242 PREDICTED: thaumatin-like protein-like [ 1.0 0.921 0.865 1e-112
255581498248 Zeamatin precursor, putative [Ricinus co 1.0 0.899 0.865 1e-112
297740339 943 unnamed protein product [Vitis vinifera] 0.959 0.226 0.864 1e-110
118486697249 unknown [Populus trichocarpa] 1.0 0.895 0.860 1e-109
224090761223 predicted protein [Populus trichocarpa] 0.991 0.991 0.864 1e-108
449448612247 PREDICTED: thaumatin-like protein-like [ 1.0 0.902 0.843 1e-103
15241688294 pathogenesis-related thaumatin-like prot 1.0 0.758 0.834 1e-102
297806145248 predicted protein [Arabidopsis lyrata su 1.0 0.899 0.839 1e-101
358249146245 uncharacterized protein LOC100799604 pre 0.995 0.906 0.833 1e-100
225449436244 PREDICTED: thaumatin-like protein [Vitis 1.0 0.913 0.762 1e-93
>gi|359481759|ref|XP_003632671.1| PREDICTED: thaumatin-like protein-like [Vitis vinifera] Back     alignment and taxonomy information
 Score =  410 bits (1055), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 193/223 (86%), Positives = 211/223 (94%)

Query: 1   GAQLIVVNNCQENLWPGILGGAGHPTPNNGGFKLSSGEEVVLDVPEKWSGRIWGRQGCRF 60
           G+QLI+VNNC+E++WPGILGGAGH TP +GGF L+SGEEVVLD+PEKWSGR+WGRQGC F
Sbjct: 20  GSQLILVNNCRESIWPGILGGAGHSTPKDGGFNLNSGEEVVLDLPEKWSGRVWGRQGCSF 79

Query: 61  DSNGKGSCDTGDCSAQLHCQGTGGAPPATVVEMTLGSSASPLHFYDVSLVDGFNLPVSMK 120
           D+NGKG+C+TGDCS  LHC+GTGG PPATVVEMTLG+SASPLHFYDVSLVDGFNLPVSM 
Sbjct: 80  DNNGKGNCETGDCSGMLHCRGTGGVPPATVVEMTLGTSASPLHFYDVSLVDGFNLPVSMA 139

Query: 121 PVGGGIGCGVASCDADLNICCPSALEVKVGGKVVGCKSACLAMQSAKYCCTGQYANPKTC 180
           PVGGGIGCG A+CD DLNICCPSALEVK GGKVVGCKSACLAMQSAKYCCTG Y+NPKTC
Sbjct: 140 PVGGGIGCGRAACDVDLNICCPSALEVKKGGKVVGCKSACLAMQSAKYCCTGNYSNPKTC 199

Query: 181 KPTLFANLFKAICPKAYSYAFDDSSSLNKCRASRYVITFCPPK 223
           KPTLFANLFKAICPKAYSYAFDDS+SLNKCRASRY+ITFCPPK
Sbjct: 200 KPTLFANLFKAICPKAYSYAFDDSTSLNKCRASRYLITFCPPK 242




Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255581498|ref|XP_002531555.1| Zeamatin precursor, putative [Ricinus communis] gi|223528816|gb|EEF30821.1| Zeamatin precursor, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|297740339|emb|CBI30521.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|118486697|gb|ABK95185.1| unknown [Populus trichocarpa] Back     alignment and taxonomy information
>gi|224090761|ref|XP_002309073.1| predicted protein [Populus trichocarpa] gi|222855049|gb|EEE92596.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|449448612|ref|XP_004142060.1| PREDICTED: thaumatin-like protein-like [Cucumis sativus] gi|449515167|ref|XP_004164621.1| PREDICTED: thaumatin-like protein-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|15241688|ref|NP_195834.1| pathogenesis-related thaumatin-like protein [Arabidopsis thaliana] gi|7340688|emb|CAB82987.1| thaumatin-like protein [Arabidopsis thaliana] gi|332003052|gb|AED90435.1| pathogenesis-related thaumatin-like protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|297806145|ref|XP_002870956.1| predicted protein [Arabidopsis lyrata subsp. lyrata] gi|297316793|gb|EFH47215.1| predicted protein [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|358249146|ref|NP_001240256.1| uncharacterized protein LOC100799604 precursor [Glycine max] gi|255641320|gb|ACU20937.1| unknown [Glycine max] Back     alignment and taxonomy information
>gi|225449436|ref|XP_002278079.1| PREDICTED: thaumatin-like protein [Vitis vinifera] gi|296086203|emb|CBI31644.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query223
TAIR|locus:2185218294 AT5G02140 "AT5G02140" [Arabido 1.0 0.758 0.794 2e-102
TAIR|locus:2153929 420 AT5G24620 [Arabidopsis thalian 0.968 0.514 0.484 9.3e-59
TAIR|locus:2194344244 ATLP-1 [Arabidopsis thaliana ( 0.964 0.881 0.486 1.7e-57
TAIR|locus:2027864264 AT1G73620 [Arabidopsis thalian 0.964 0.814 0.481 7.5e-57
TAIR|locus:2121189345 AT4G38660 "AT4G38660" [Arabido 0.968 0.626 0.459 5.3e-56
TAIR|locus:2027161246 TLP-3 "AT1G75030" [Arabidopsis 0.950 0.861 0.490 6.8e-56
UNIPROTKB|O80327244 TL1 "Thaumatin-like protein 1" 0.982 0.897 0.479 1.3e-54
TAIR|locus:2016442247 AT1G19320 "AT1G19320" [Arabido 0.982 0.886 0.457 3.4e-54
TAIR|locus:2203236356 AT1G77700 "AT1G77700" [Arabido 0.928 0.581 0.474 4.3e-54
TAIR|locus:2005549330 AT1G75800 "AT1G75800" [Arabido 0.968 0.654 0.473 2.4e-53
TAIR|locus:2185218 AT5G02140 "AT5G02140" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1015 (362.4 bits), Expect = 2.0e-102, P = 2.0e-102
 Identities = 178/224 (79%), Positives = 197/224 (87%)

Query:     1 GAQLIVVNNCQENLWPGILGGAGHPTPNNGGFKLSSGEEVVLDVPEKWSGRIWGRQGCRF 60
             GAQLI+VNNCQE++WPGILGG G  TP NGGF + SGEE ++DVP+KWSGRIWGRQGC F
Sbjct:    20 GAQLIIVNNCQESIWPGILGGGGQITPRNGGFHMGSGEETIIDVPDKWSGRIWGRQGCTF 79

Query:    61 DSNGKGSCDTGDCS-AQLHCQGTGGAPPATVVEMTLGSSASPLHFYDVSLVDGFNLPVSM 119
             + NGKGSC TGDC+   ++CQGTGG PPATVVEMTLGSS+SPLHFYDVSLVDGFNLPVSM
Sbjct:    80 NQNGKGSCQTGDCNDGSINCQGTGGVPPATVVEMTLGSSSSPLHFYDVSLVDGFNLPVSM 139

Query:   120 KPVGGGIGCGVASCDADLNICCPSALEXXXXXXXXXXXSACLAMQSAKYCCTGQYANPKT 179
             KP+GGG+GCGVA+C+ +LNICCPSALE           SACLAMQSAKYCCTG+YANP+ 
Sbjct:   140 KPIGGGVGCGVAACEVNLNICCPSALEVKRDGKVVGCKSACLAMQSAKYCCTGEYANPQA 199

Query:   180 CKPTLFANLFKAICPKAYSYAFDDSSSLNKCRASRYVITFCPPK 223
             CKPTLFANLFKAICPKAYSYAFDDSSSLNKCRASRYVITFCPPK
Sbjct:   200 CKPTLFANLFKAICPKAYSYAFDDSSSLNKCRASRYVITFCPPK 243




GO:0003674 "molecular_function" evidence=ND
GO:0005576 "extracellular region" evidence=ISM
GO:0051707 "response to other organism" evidence=ISS
TAIR|locus:2153929 AT5G24620 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2194344 ATLP-1 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2027864 AT1G73620 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2121189 AT4G38660 "AT4G38660" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2027161 TLP-3 "AT1G75030" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|O80327 TL1 "Thaumatin-like protein 1" [Pyrus pyrifolia (taxid:3767)] Back     alignment and assigned GO terms
TAIR|locus:2016442 AT1G19320 "AT1G19320" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2203236 AT1G77700 "AT1G77700" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2005549 AT1G75800 "AT1G75800" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
O80327TLP1_PYRPYNo assigned EC number0.50670.98200.8975N/Ano

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Your Input:
GSVIVG00021354001
SubName- Full=Chromosome chr8 scaffold_23, whole genome shotgun sequence; (242 aa)
(Vitis vinifera)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query223
cd09218219 cd09218, TLP-PA, allergenic/antifungal thaumatin-l 1e-108
pfam00314212 pfam00314, Thaumatin, Thaumatin family 1e-100
smart00205218 smart00205, THN, Thaumatin family 2e-74
cd09219229 cd09219, TLP-F, thaumatin-like proteins: basidiomy 2e-41
cd09215157 cd09215, Thaumatin-like, the sweet-tasting protein 1e-36
cd09217151 cd09217, TLP-P, thaumatin and allergenic/antifunga 4e-33
cd08961153 cd08961, GH64-TLP-SF, glycoside hydrolase family 6 6e-32
>gnl|CDD|185757 cd09218, TLP-PA, allergenic/antifungal thaumatin-like proteins: plant and animal homologs Back     alignment and domain information
 Score =  310 bits (797), Expect = e-108
 Identities = 127/220 (57%), Positives = 149/220 (67%), Gaps = 3/220 (1%)

Query: 3   QLIVVNNCQENLWPGILGGAGHPTPNNGGFKLSSGEEVVLDVPEKWSGRIWGRQGCRFDS 62
              + N C   +WPGILG AGHP    GGF+L+ G+   +D P  WSGR WGR GC FDS
Sbjct: 1   TFTIYNKCPFTVWPGILGNAGHPQLGGGGFELAPGQSRTIDAPSGWSGRFWGRTGCSFDS 60

Query: 63  NGKGSCDTGDCSAQLHCQGTGGAPPATVVEMTLGSSASPLHFYDVSLVDGFNLPVSMKPV 122
           +GKGSC TGDC   L C G GGAPPAT+ E TLG S     FYDVSLVDG+NLPVS+ P 
Sbjct: 61  SGKGSCATGDCGGGLECNGAGGAPPATLAEFTLGGSGG-QDFYDVSLVDGYNLPVSITPQ 119

Query: 123 GGGIGCGVASCDADLNICCPSALEVK-VGGKVVGCKSACLAMQSAKYCCTGQYANPKTCK 181
           GG  GC  A C ADLN  CP+ L+VK  GG+VV CKSACLA  + +YCC G Y  P+TCK
Sbjct: 120 GGSGGCRTAGCVADLNAVCPAELQVKNSGGRVVACKSACLAFNTDEYCCRGAYGTPETCK 179

Query: 182 PTLFANLFKAICPKAYSYAFDDSSSLNKCR-ASRYVITFC 220
           PT ++ LFK  CP+AYSYA+DD +S   C   + YVITFC
Sbjct: 180 PTTYSRLFKNACPQAYSYAYDDPTSTFTCSSGANYVITFC 219


This subfamily is represented by the thaumatin-like proteins (TLPs), Cherry Allergen Pru Av 2 TLP, Peach PpAZ44 TLP (a propylene-induced TLP in abscission), the Caenorhabditis elegans thaumatin family member (thn-6), and other plant and animal homologs. TLPs are involved in host defense and a wide range of developmental processes in fungi, plants, and animals. Due to their inducible expression by environmental stresses such as pathogen/pest attack, drought and cold, plant TLPs are classified as the pathogenesis-related (PR) protein family 5 (PR5). Several members of the plant TLP family have been reported as food allergens from fruits (i.e., cherry, Pru av 2; bell pepper, Cap a1; tomatoes, Lyc e NP24) and pollen allergens from conifers (i.e., mountain cedar, Jun a 3; Arizona cypress, Cup a3; Japanese cedar, Cry j3). TLPs are three-domain, crescent-fold structures with either an electronegative, electropositive, or neutral cleft occurring between domains I and II. It has been proposed that the antifungal activity of plant PR5 proteins relies on the strong electronegative character of this cleft. Some TLPs hydrolyze the beta-1,3-glucans of the type commonly found in fungal walls. TLPs within this subfamily contain 16 conserved Cys residues. Length = 219

>gnl|CDD|215853 pfam00314, Thaumatin, Thaumatin family Back     alignment and domain information
>gnl|CDD|128501 smart00205, THN, Thaumatin family Back     alignment and domain information
>gnl|CDD|185758 cd09219, TLP-F, thaumatin-like proteins: basidiomycete homologs Back     alignment and domain information
>gnl|CDD|185754 cd09215, Thaumatin-like, the sweet-tasting protein, thaumatin, and thaumatin-like proteins involved in host defense Back     alignment and domain information
>gnl|CDD|185756 cd09217, TLP-P, thaumatin and allergenic/antifungal thaumatin-like proteins: plant homologs Back     alignment and domain information
>gnl|CDD|185752 cd08961, GH64-TLP-SF, glycoside hydrolase family 64 (beta-1,3-glucanases which produce specific pentasaccharide oligomers) and thaumatin-like proteins Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 223
cd09218219 TLP-PA allergenic/antifungal thaumatin-like protei 100.0
smart00205218 THN Thaumatin family. The thaumatin family gathers 100.0
cd09219229 TLP-F thaumatin-like proteins: basidiomycete homol 100.0
PF00314213 Thaumatin: Thaumatin family; InterPro: IPR001938 T 100.0
cd09215157 Thaumatin-like the sweet-tasting protein, thaumati 100.0
cd09217151 TLP-P thaumatin and allergenic/antifungal thaumati 100.0
cd08961153 GH64-TLP-SF glycoside hydrolase family 64 (beta-1, 100.0
PF04681155 Bys1: Blastomyces yeast-phase-specific protein; In 97.87
cd09216 353 GH64-LPHase-like glycoside hydrolase family 64: la 96.67
cd09220 369 GH64-GluB-like glycoside hydrolase family 64: beta 95.81
>cd09218 TLP-PA allergenic/antifungal thaumatin-like proteins: plant and animal homologs Back     alignment and domain information
Probab=100.00  E-value=6.6e-90  Score=594.06  Aligned_cols=217  Identities=59%  Similarity=1.206  Sum_probs=209.3

Q ss_pred             EEEEEeCCCCcccceeecCCCCCCCCCCceeecCCCeEEEecCCCCceeEeeecccccCCCCCcCCcCcccCcccccCCC
Q 044059            3 QLIVVNNCQENLWPGILGGAGHPTPNNGGFKLSSGEEVVLDVPEKWSGRIWGRQGCRFDSNGKGSCDTGDCSAQLHCQGT   82 (223)
Q Consensus         3 t~tv~N~C~~tVwp~~~~~~g~~~~~~~g~~L~~G~s~s~~vp~~WsGriW~RtgCs~d~~g~~~C~TGdC~g~l~C~g~   82 (223)
                      +|||+|||+||||||+++++|+++|..+||+|+||++++|+||++|+|||||||+|+||+.|+++|+||||+|+|+|++.
T Consensus         1 tfti~N~C~~tVWp~~~~~~g~~~l~~gGf~L~~g~s~~~~vp~~WsGriWaRTgC~~~~~g~~~C~TGDCgg~l~C~g~   80 (219)
T cd09218           1 TFTIYNKCPFTVWPGILGNAGHPQLGGGGFELAPGQSRTIDAPSGWSGRFWGRTGCSFDSSGKGSCATGDCGGGLECNGA   80 (219)
T ss_pred             CEEEEECCCCCccceecCCCCCCCCCCCCEEcCCCCeEEEeCCCCcceeeeeccCCCCCCCCccccccCCCCCeeecCCC
Confidence            69999999999999999999999999999999999999999999999999999999999999999999999999999988


Q ss_pred             CCCCCcceEEEEecCCCCCCceeeeecccccCCCceeccCCCCCCCCCccccccccccCCCCceee-cCCeEEeccchhh
Q 044059           83 GGAPPATVVEMTLGSSASPLHFYDVSLVDGFNLPVSMKPVGGGIGCGVASCDADLNICCPSALEVK-VGGKVVGCKSACL  161 (223)
Q Consensus        83 g~~ppaTlaEftl~~~~~~~d~YDVSlVdG~NlP~~i~p~~g~~~C~~~~C~~dln~~CP~~l~v~-~~g~vv~C~SaC~  161 (223)
                      +++||+|||||||++. +++|||||||||||||||+|+|+++.+.|+.++|.+|||..||.||||. .+|+||||||||.
T Consensus        81 ~g~pP~TlaEftl~~~-~~~d~YdvSlVdGfNlP~~i~P~~~~~~C~~~~C~~din~~CP~~L~v~~~~g~vv~C~SaC~  159 (219)
T cd09218          81 GGAPPATLAEFTLGGS-GGQDFYDVSLVDGYNLPVSITPQGGSGGCRTAGCVADLNAVCPAELQVKNSGGRVVACKSACL  159 (219)
T ss_pred             CCCCCceeEEEEeccC-CCCcceeeeeeccccCCEEEEecCCCCCCCCCcccCcccccCCHHHeeccCCCcEeeecCHHH
Confidence            8889999999999875 6789999999999999999999876668999999999999999999996 4688999999999


Q ss_pred             ccCCCccccCCCCCCCCCCCCchhHHHHHhhCCCccccccCCCCCceeecC-CCeEEEec
Q 044059          162 AMQSAKYCCTGQYANPKTCKPTLFANLFKAICPKAYSYAFDDSSSLNKCRA-SRYVITFC  220 (223)
Q Consensus       162 a~~~~~~CC~g~~~~p~~C~pt~ys~~fK~~CP~AYsya~Dd~tstftC~~-~~y~vtFC  220 (223)
                      +|++|||||+|+|++|++|+|+.||++||++||+||+|||||++|+|+|++ ++|+||||
T Consensus       160 ~f~~~~~CC~g~~~~p~~C~pt~ys~~FK~~CP~Aysya~Dd~~s~~tC~~~~~Y~I~FC  219 (219)
T cd09218         160 AFNTDEYCCRGAYGTPETCKPTTYSRLFKNACPQAYSYAYDDPTSTFTCSSGANYVITFC  219 (219)
T ss_pred             hhCCccceecCCCCCCCcCCCcchhHHHHhhCccccccCCCCCCcceEcCCCCCEEEEeC
Confidence            999999999999999999999999999999999999999999999999997 99999998



This subfamily is represented by the thaumatin-like proteins (TLPs), Cherry Allergen Pru Av 2 TLP, Peach PpAZ44 TLP (a propylene-induced TLP in abscission), the Caenorhabditis elegans thaumatin family member (thn-6), and other plant and animal homologs. TLPs are involved in host defense and a wide range of developmental processes in fungi, plants, and animals. Due to their inducible expression by environmental stresses such as pathogen/pest attack, drought and cold, plant TLPs are classified as the pathogenesis-related (PR) protein family 5 (PR5). Several members of the plant TLP family have been reported as food allergens from fruits (i.e., cherry, Pru av 2; bell pepper, Cap a1; tomatoes, Lyc e NP24) and pollen allergens from conifers (i.e., mountain cedar, Jun a 3; Arizona cypress, Cup a3; Japanese cedar, Cry j3). TLPs are three-domain, crescent-fold structures with either an electronegative, ele

>smart00205 THN Thaumatin family Back     alignment and domain information
>cd09219 TLP-F thaumatin-like proteins: basidiomycete homologs Back     alignment and domain information
>PF00314 Thaumatin: Thaumatin family; InterPro: IPR001938 Thaumatin [] is an intensely sweet-tasting protein, 100 000 times sweeter than sucrose on a molar basis [] found in berries from Thaumatococcus daniellii, a tropical flowering plant known as Katemfe, it is induced by attack by viroids, which are single-stranded unencapsulated RNA molecules that do not code for protein Back     alignment and domain information
>cd09215 Thaumatin-like the sweet-tasting protein, thaumatin, and thaumatin-like proteins involved in host defense Back     alignment and domain information
>cd09217 TLP-P thaumatin and allergenic/antifungal thaumatin-like proteins: plant homologs Back     alignment and domain information
>cd08961 GH64-TLP-SF glycoside hydrolase family 64 (beta-1,3-glucanases which produce specific pentasaccharide oligomers) and thaumatin-like proteins Back     alignment and domain information
>PF04681 Bys1: Blastomyces yeast-phase-specific protein; InterPro: IPR006771 The pathogenic dimorphic fungal organism Blastomyces dermatitidis exists as a budding yeast at 37 degrees C and as a mycelium at 25 degrees C Back     alignment and domain information
>cd09216 GH64-LPHase-like glycoside hydrolase family 64: laminaripentaose-producing, beta-1,3-glucanase (LPHase)-like Back     alignment and domain information
>cd09220 GH64-GluB-like glycoside hydrolase family 64: beta-1,3-glucanase B (GluB)-like Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query223
3zs3_A222 High Resolution Structure Of Mal D 2, The Thaumatin 2e-49
2ahn_A222 High Resolution Structure Of A Cherry Allergen Pru 9e-45
4h8t_A198 Structure Of Haze Forming Proteins In White Wines: 3e-33
1du5_A206 The Crystal Structure Of Zeamatin. Length = 206 4e-33
1z3q_A200 Resolution Of The Structure Of The Allergenic And A 1e-31
2i0w_A207 Crystal Structure Analysis Of Np24-I, A Thaumatin-L 6e-31
1pcv_A205 Crystal Structure Of Osmotin, A Plant Antifungal Pr 2e-30
3aok_A207 Crystal Structure Of Sweet-Tasting Protein Thaumati 1e-28
1rqw_A207 Thaumatin Structure At 1.05 A Resolution Length = 2 3e-28
2blr_A206 Thaumatin Before A High Dose X-Ray "burn" Length = 4e-28
1kwn_A207 1.2 A Structure Of Thaumatin Crystallized In Gel Le 4e-28
1thv_A207 The Structures Of Three Crystal Forms Of The Sweet 5e-28
1aun_A208 Pathogenesis-Related Protein 5d From Nicotiana Taba 6e-28
2d8o_A207 Structure Of Vil-Thaumatin Length = 207 1e-27
2d8p_A207 Structure Of Hyper-Vil-Thaumatin Length = 207 4e-27
3g7m_A151 Structure Of The Thaumatin-Like Xylanase Inhibitor 1e-12
>pdb|3ZS3|A Chain A, High Resolution Structure Of Mal D 2, The Thaumatin Like Food Allergen From Apple Length = 222 Back     alignment and structure

Iteration: 1

Score = 192 bits (487), Expect = 2e-49, Method: Compositional matrix adjust. Identities = 101/223 (45%), Positives = 134/223 (60%), Gaps = 4/223 (1%) Query: 2 AQLIVVNNCQENLWPGILGGAGHPTPNNGGFKLSSGEEVVLDVPEKWSGRIWGRQGCRFD 61 A++ NNC +WPG L G P + GF+L+S +D P WSGR WGR C D Sbjct: 1 AKITFTNNCPNTVWPGTLTGDQKPQLSLTGFELASKASRSVDAPSPWSGRFWGRTRCSTD 60 Query: 62 SNGKGSCDTGDC-SAQLHCQGTGGAPPATVVEMTLGSSASPLHFYDVSLVDGFNLPVSMK 120 + GK +C+T DC S Q+ C G G PPAT+VE+T+ ++ +YDVSLVDGFNLP+S+ Sbjct: 61 AAGKFTCETADCGSGQVACNGAGAVPPATLVEITIAANGG-QDYYDVSLVDGFNLPMSVA 119 Query: 121 PVGGGIGCGVASCDADLNICCPSALEXXXXXXXXXX-XSACLAMQSAKYCCTGQYANPKT 179 P GG C +SC A++N CP+ L+ SACLA +KYCCT P+T Sbjct: 120 PQGGTGECKPSSCPANVNKVCPAPLQVKAADGSVISCKSACLAFGDSKYCCTPPNNTPET 179 Query: 180 CKPTLFANLFKAICPKAYSYAFDDSSSLNKCRAS-RYVITFCP 221 C PT ++ +F+ CP+AYSYA+DD +S C YVITFCP Sbjct: 180 CPPTEYSEIFEKQCPQAYSYAYDDKNSTFTCSGGPDYVITFCP 222
>pdb|2AHN|A Chain A, High Resolution Structure Of A Cherry Allergen Pru Av 2 Length = 222 Back     alignment and structure
>pdb|4H8T|A Chain A, Structure Of Haze Forming Proteins In White Wines: Vitis Vinifera Thaumatin-Like Proteins Length = 198 Back     alignment and structure
>pdb|1DU5|A Chain A, The Crystal Structure Of Zeamatin. Length = 206 Back     alignment and structure
>pdb|1Z3Q|A Chain A, Resolution Of The Structure Of The Allergenic And Antifungal Banana Fruit Thaumatin-Like Protein At 1.7a Length = 200 Back     alignment and structure
>pdb|2I0W|A Chain A, Crystal Structure Analysis Of Np24-I, A Thaumatin-Like Protein Length = 207 Back     alignment and structure
>pdb|1PCV|A Chain A, Crystal Structure Of Osmotin, A Plant Antifungal Protein Length = 205 Back     alignment and structure
>pdb|3AOK|A Chain A, Crystal Structure Of Sweet-Tasting Protein Thaumatin Ii Length = 207 Back     alignment and structure
>pdb|1RQW|A Chain A, Thaumatin Structure At 1.05 A Resolution Length = 207 Back     alignment and structure
>pdb|2BLR|A Chain A, Thaumatin Before A High Dose X-Ray "burn" Length = 206 Back     alignment and structure
>pdb|1KWN|A Chain A, 1.2 A Structure Of Thaumatin Crystallized In Gel Length = 207 Back     alignment and structure
>pdb|1THV|A Chain A, The Structures Of Three Crystal Forms Of The Sweet Protein Thaumatin Length = 207 Back     alignment and structure
>pdb|1AUN|A Chain A, Pathogenesis-Related Protein 5d From Nicotiana Tabacum Length = 208 Back     alignment and structure
>pdb|2D8O|A Chain A, Structure Of Vil-Thaumatin Length = 207 Back     alignment and structure
>pdb|2D8P|A Chain A, Structure Of Hyper-Vil-Thaumatin Length = 207 Back     alignment and structure
>pdb|3G7M|A Chain A, Structure Of The Thaumatin-Like Xylanase Inhibitor Tlxi Length = 151 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query223
2ahn_A222 Thaumatin-like protein; allergen; 1.30A {Prunus av 4e-66
1du5_A206 Zeamatin; beta sandwich, antifungal protein; 2.50A 8e-55
2vhk_A206 Thaumatin-I; kinetics of crystallization, chiralit 4e-53
1aun_A208 PR-5D; antifungal protein, pathogenesis-related pr 3e-46
1z3q_A200 Thaumatin-like protein; beta sandwich, antifungal 1e-45
3g7m_A151 Xylanase inhibitor TL-XI; beta-sheets, xylan degra 1e-35
>2ahn_A Thaumatin-like protein; allergen; 1.30A {Prunus avium} Length = 222 Back     alignment and structure
 Score =  202 bits (515), Expect = 4e-66
 Identities = 101/223 (45%), Positives = 126/223 (56%), Gaps = 4/223 (1%)

Query: 2   AQLIVVNNCQENLWPGILGGAGHPTPNNGGFKLSSGEEVVLDVPEKWSGRIWGRQGCRFD 61
           A +   NNC   +WPG L     P  +  GF+L+S     LD P  W+GR W R GC  D
Sbjct: 1   ATISFKNNCPYMVWPGTLTSDQKPQLSTTGFELASQASFQLDTPVPWNGRFWARTGCSTD 60

Query: 62  SNGKGSCDTGDC-SAQLHCQGTGGAPPATVVEMTLGSSASPLHFYDVSLVDGFNLPVSMK 120
           ++GK  C T DC S Q+ C G G  PPAT+ E  + +      FYDVSLVDGFNLP+S+ 
Sbjct: 61  ASGKFVCATADCASGQVMCNGNGAIPPATLAEFNIPAGGG-QDFYDVSLVDGFNLPMSVT 119

Query: 121 PVGGGIGCGVASCDADLNICCPSALEVK-VGGKVVGCKSACLAMQSAKYCCTGQYANPKT 179
           P GG   C  ASC A++N  CPS L+ K   G VV C SAC+   + +YCCT     P+T
Sbjct: 120 PQGGTGDCKTASCPANVNAVCPSELQKKGSDGSVVACLSACVKFGTPQYCCTPPQNTPET 179

Query: 180 CKPTLFANLFKAICPKAYSYAFDDSSSLNKCRAS-RYVITFCP 221
           C PT ++ +F   CP AYSYA+DD      C     Y ITFCP
Sbjct: 180 CPPTNYSEIFHNACPDAYSYAYDDKRGTFTCNGGPNYAITFCP 222


>1du5_A Zeamatin; beta sandwich, antifungal protein; 2.50A {Zea mays} SCOP: b.25.1.1 Length = 206 Back     alignment and structure
>2vhk_A Thaumatin-I; kinetics of crystallization, chirality, temperature, microbatch, plant protein, sweet protein; HET: TLA; 0.94A {Thaumatococcus daniellii} PDB: 2blu_A* 2blr_A* 2wbz_A 3n02_A* 3n03_A* 2vhr_A* 1lr2_A* 1lr3_A* 1lxz_A* 1ly0_A* 1pp3_A 1thi_A 2oqn_A* 1kwn_A* 2vi1_A 2vi2_A* 2vi3_A* 2vi4_A* 2vu6_A 2vu7_A* ... Length = 206 Back     alignment and structure
>1aun_A PR-5D; antifungal protein, pathogenesis-related protein, osmotin, thaumatin-like protein; 1.80A {Nicotiana tabacum} SCOP: b.25.1.1 PDB: 2i0w_A 1pcv_A Length = 208 Back     alignment and structure
>1z3q_A Thaumatin-like protein; beta sandwich, antifungal protein; 1.70A {Musa acuminata} Length = 200 Back     alignment and structure
>3g7m_A Xylanase inhibitor TL-XI; beta-sheets, xylan degradation, hydrolase inhibitor; HET: GOL; 2.91A {Triticum aestivum} Length = 151 Back     alignment and structure

Structure Templates Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query223
2ahn_A222 Thaumatin-like protein; allergen; 1.30A {Prunus av 100.0
1du5_A206 Zeamatin; beta sandwich, antifungal protein; 2.50A 100.0
2vhk_A206 Thaumatin-I; kinetics of crystallization, chiralit 100.0
1aun_A208 PR-5D; antifungal protein, pathogenesis-related pr 100.0
1z3q_A200 Thaumatin-like protein; beta sandwich, antifungal 100.0
3g7m_A151 Xylanase inhibitor TL-XI; beta-sheets, xylan degra 100.0
3gd0_A 367 Laminaripentaose-producing beta-1,3-guluase (lphas 92.67
>2ahn_A Thaumatin-like protein; allergen; 1.30A {Prunus avium} Back     alignment and structure
Probab=100.00  E-value=9e-94  Score=618.23  Aligned_cols=219  Identities=46%  Similarity=0.945  Sum_probs=211.7

Q ss_pred             cEEEEEeCCCCcccceeecCCCCCCCCCCceeecCCCeEEEecCCCCceeEeeecccccCCCCCcCCcCcccC-cccccC
Q 044059            2 AQLIVVNNCQENLWPGILGGAGHPTPNNGGFKLSSGEEVVLDVPEKWSGRIWGRQGCRFDSNGKGSCDTGDCS-AQLHCQ   80 (223)
Q Consensus         2 ~t~tv~N~C~~tVwp~~~~~~g~~~~~~~g~~L~~G~s~s~~vp~~WsGriW~RtgCs~d~~g~~~C~TGdC~-g~l~C~   80 (223)
                      ++|||+|+|+|||||++++++|++++..+||+|+||++++|.||++|+|||||||+|+||++|+++|+||||+ |.|+|+
T Consensus         1 ~t~ti~N~C~~tVWp~~~~~~g~~~l~~gG~~L~~G~s~s~~~p~~WsGRiWgRTgC~~d~~g~~~C~TGdCgsg~l~C~   80 (222)
T 2ahn_A            1 ATISFKNNCPYMVWPGTLTSDQKPQLSTTGFELASQASFQLDTPVPWNGRFWARTGCSTDASGKFVCATADCASGQVMCN   80 (222)
T ss_dssp             CEEEEEECSSSCBEEEEEEGGGCCCCSCSBCCBCTTCEEEEECCSSEEEEEEEEEEEEECTTSCEEEEESCCCSSSSSCT
T ss_pred             CEEEEEeCCCCCCCCEecCCCCCCccCCCcEEcCCCCEEEEecCCCcceeEEeccccCCCCCCCcccccCCccCCceecC
Confidence            5899999999999999999999999999999999999999999999999999999999999999999999999 999999


Q ss_pred             CCCCCCCcceEEEEecCCCCCCceeeeecccccCCCceeccCCCCCCCCCccccccccccCCCCceeec-CCeEEeccch
Q 044059           81 GTGGAPPATVVEMTLGSSASPLHFYDVSLVDGFNLPVSMKPVGGGIGCGVASCDADLNICCPSALEVKV-GGKVVGCKSA  159 (223)
Q Consensus        81 g~g~~ppaTlaEftl~~~~~~~d~YDVSlVdG~NlP~~i~p~~g~~~C~~~~C~~dln~~CP~~l~v~~-~g~vv~C~Sa  159 (223)
                      +.+++||+|||||+|++. +++|||||||||||||||+|+|+++++.|+.++|.+|||..||.||||++ +|+|||||||
T Consensus        81 g~~g~pPaTLaEftl~~~-~~~dfYDVSlVDGfNlPm~i~P~~g~~~C~~~~C~~dln~~CP~eL~v~~~~G~~v~C~sa  159 (222)
T 2ahn_A           81 GNGAIPPATLAEFNIPAG-GGQDFYDVSLVDGFNLPMSVTPQGGTGDCKTASCPANVNAVCPSELQKKGSDGSVVACLSA  159 (222)
T ss_dssp             TCCCCSSCCEEEEEECST-TCEEEEEEECTTCBSSCEEEEEESCBSCCCCEEECSCGGGGCCGGGEEECTTSCEEEECCH
T ss_pred             CCCCCCCceeeeEEecCC-CCCceeeeecccccccceEEEecCCCCCcccCcccCchhhhCCHHHeeecCCCcEeccccc
Confidence            988899999999999976 67999999999999999999998866789999999999999999999964 6899999999


Q ss_pred             hhccCCCccccCCCCCCCCCCCCchhHHHHHhhCCCccccccCCCCCceeecC-CCeEEEecC
Q 044059          160 CLAMQSAKYCCTGQYANPKTCKPTLFANLFKAICPKAYSYAFDDSSSLNKCRA-SRYVITFCP  221 (223)
Q Consensus       160 C~a~~~~~~CC~g~~~~p~~C~pt~ys~~fK~~CP~AYsya~Dd~tstftC~~-~~y~vtFCP  221 (223)
                      |.||++|||||+|+|++|++|+|+.||++||++||+||||||||++|||+|++ ++|+|||||
T Consensus       160 C~af~~~~yCC~g~~~~p~~C~pt~ys~~FK~~CP~AYsYa~DD~tstftC~~~~~y~itFCP  222 (222)
T 2ahn_A          160 CVKFGTPQYCCTPPQNTPETCPPTNYSEIFHNACPDAYSYAYDDKRGTFTCNGGPNYAITFCP  222 (222)
T ss_dssp             HHHHCCHHHHCCTTSCSTTTSCCCHHHHHHHHHCTTSBCSTTCTTTTCSEEESCCEEEEEECC
T ss_pred             ccccCCCccccCCCCCCCCCCCcchHHHHHhhcCcccccCCCCCCCcCeEcCCCCCEEEEeCc
Confidence            99999999999999999999999999999999999999999999999999998 799999998



>1du5_A Zeamatin; beta sandwich, antifungal protein; 2.50A {Zea mays} SCOP: b.25.1.1 Back     alignment and structure
>2vhk_A Thaumatin-I; kinetics of crystallization, chirality, temperature, microbatch, plant protein, sweet protein; HET: TLA; 0.94A {Thaumatococcus daniellii} PDB: 2blu_A* 2blr_A* 2wbz_A 3n02_A* 3n03_A* 2vhr_A* 1lr2_A* 1lr3_A* 1lxz_A* 1ly0_A* 1pp3_A 1thi_A 2oqn_A* 1kwn_A* 2vi1_A 2vi2_A* 2vi3_A* 2vi4_A* 2vu6_A 2vu7_A* ... Back     alignment and structure
>1aun_A PR-5D; antifungal protein, pathogenesis-related protein, osmotin, thaumatin-like protein; 1.80A {Nicotiana tabacum} SCOP: b.25.1.1 PDB: 2i0w_A 1pcv_A Back     alignment and structure
>1z3q_A Thaumatin-like protein; beta sandwich, antifungal protein; 1.70A {Musa acuminata} Back     alignment and structure
>3g7m_A Xylanase inhibitor TL-XI; beta-sheets, xylan degradation, hydrolase inhibitor; HET: GOL; 2.91A {Triticum aestivum} Back     alignment and structure
>3gd0_A Laminaripentaose-producing beta-1,3-guluase (lphase); glycoside hydrolase, 3- glucnase; 1.62A {Streptomyces matensis} PDB: 3gd9_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 223
d1du5a_206 b.25.1.1 (A:) Zeamatin {Maize (Zea mays) [TaxId: 4 1e-66
d1rqwa_207 b.25.1.1 (A:) Thaumatin {Ketemfe (Thaumatococcus d 5e-65
d1auna_208 b.25.1.1 (A:) Pathogenesis-related protein 5d {Com 2e-62
>d1du5a_ b.25.1.1 (A:) Zeamatin {Maize (Zea mays) [TaxId: 4577]} Length = 206 Back     information, alignment and structure

class: All beta proteins
fold: Osmotin, thaumatin-like protein
superfamily: Osmotin, thaumatin-like protein
family: Osmotin, thaumatin-like protein
domain: Zeamatin
species: Maize (Zea mays) [TaxId: 4577]
 Score =  202 bits (515), Expect = 1e-66
 Identities = 84/222 (37%), Positives = 112/222 (50%), Gaps = 18/222 (8%)

Query: 2   AQLIVVNNCQENLWPGILGGAGHPTPNNGGFKLSSGEEVVLDVP-EKWSGRIWGRQGCRF 60
           A   VVN C   +W   +       P  GG +L+ GE   +  P    + RIW R GC+F
Sbjct: 1   AVFTVVNQCPFTVWAASV-------PVGGGRQLNRGESWRITAPAGTTAARIWARTGCKF 53

Query: 61  DSNGKGSCDTGDCSAQLHCQGTGGAPPATVVEMTLGSSASPLHFYDVSLVDGFNLPVSMK 120
           D++G+GSC TGDC   L C G  G  P T+ E  L    + L F+D+SL+DGFN+P+S  
Sbjct: 54  DASGRGSCRTGDCGGVLQCTGY-GRAPNTLAEYALKQFNN-LDFFDISLIDGFNVPMSFL 111

Query: 121 PVGGGIGCGVASCDADLNICCPSALEVKVGGKVVGCKSACLAMQSAKYCCTGQYANPKTC 180
           P GG        C  D+N  CP+ L          C +AC   +  +YCC G       C
Sbjct: 112 PDGGSGCSRGPRCAVDVNARCPAELRQD-----GVCNNACPVFKKDEYCCVGSA--ANDC 164

Query: 181 KPTLFANLFKAICPKAYSYAFDDSSSLNKCRA-SRYVITFCP 221
            PT ++  FK  CP AYSY  DD++S   C A + Y + FCP
Sbjct: 165 HPTNYSRYFKGQCPDAYSYPKDDATSTFTCPAGTNYKVVFCP 206


>d1rqwa_ b.25.1.1 (A:) Thaumatin {Ketemfe (Thaumatococcus daniellii) [TaxId: 4621]} Length = 207 Back     information, alignment and structure
>d1auna_ b.25.1.1 (A:) Pathogenesis-related protein 5d {Common tobacco (Nicotiana tabacum) [TaxId: 4097]} Length = 208 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query223
d1auna_208 Pathogenesis-related protein 5d {Common tobacco (N 100.0
d1du5a_206 Zeamatin {Maize (Zea mays) [TaxId: 4577]} 100.0
d1rqwa_207 Thaumatin {Ketemfe (Thaumatococcus daniellii) [Tax 100.0
>d1auna_ b.25.1.1 (A:) Pathogenesis-related protein 5d {Common tobacco (Nicotiana tabacum) [TaxId: 4097]} Back     information, alignment and structure
class: All beta proteins
fold: Osmotin, thaumatin-like protein
superfamily: Osmotin, thaumatin-like protein
family: Osmotin, thaumatin-like protein
domain: Pathogenesis-related protein 5d
species: Common tobacco (Nicotiana tabacum) [TaxId: 4097]
Probab=100.00  E-value=2.1e-84  Score=553.11  Aligned_cols=203  Identities=39%  Similarity=0.827  Sum_probs=190.5

Q ss_pred             CcEEEEEeCCCCcccceeecCCCCCCCCCCceeecCCCeEEEecCCCCc-eeEeeecccccCCCCCcCCcCcccCccccc
Q 044059            1 GAQLIVVNNCQENLWPGILGGAGHPTPNNGGFKLSSGEEVVLDVPEKWS-GRIWGRQGCRFDSNGKGSCDTGDCSAQLHC   79 (223)
Q Consensus         1 a~t~tv~N~C~~tVwp~~~~~~g~~~~~~~g~~L~~G~s~s~~vp~~Ws-GriW~RtgCs~d~~g~~~C~TGdC~g~l~C   79 (223)
                      +++|||+|||+|||||+++++       .+||+|+||++++|.+|++|. |||||||+|+||+.|+++|+||||+|.|+|
T Consensus         1 ~~~fti~N~C~~TVWp~~~p~-------~gg~~L~~g~s~~~~~p~~~~~gRiW~RTgC~~d~~G~~~C~TGdCgg~l~C   73 (208)
T d1auna_           1 SGVFEVHNNCPYTVWAAATPV-------GGGRRLERGQSWWFWAPPGTKMARIWGRTNCNFDGAGRGWCQTGDCGGVLEC   73 (208)
T ss_dssp             CCEEEEEECSSSCEEEEEETT-------TEEEEECTTCEEEEECCTTCCSEEEEEEEEEEECTTSBEEEEESCCTTBSSC
T ss_pred             CCEEEEEeCCCCCcccccccC-------CCCcccCCCCceEEECCCCCcccceeecCCCCcCCCCccceeccCcCCeEec
Confidence            689999999999999999875       468999999999999999985 999999999999999999999999999999


Q ss_pred             CCCCCCCCcceEEEEecCCCCCCceeeeecccccCCCceeccCCC-CCCCCCccccccccccCCCCceeecCCeEEeccc
Q 044059           80 QGTGGAPPATVVEMTLGSSASPLHFYDVSLVDGFNLPVSMKPVGG-GIGCGVASCDADLNICCPSALEVKVGGKVVGCKS  158 (223)
Q Consensus        80 ~g~g~~ppaTlaEftl~~~~~~~d~YDVSlVdG~NlP~~i~p~~g-~~~C~~~~C~~dln~~CP~~l~v~~~g~vv~C~S  158 (223)
                      ++. ++||+|||||||++. +++|||||||||||||||+|+|.++ ++.|+.++|.+|||..||.||||+.     ||+|
T Consensus        74 ~~~-G~pP~TlaEftl~~~-~~~DfYDvSlVDGfNlP~~i~P~~~~~~~C~~~~C~~dln~~CP~~L~v~~-----~C~s  146 (208)
T d1auna_          74 KGW-GKPPNTLAEYALNQF-SNLDFWDISVIDGFNIPMSFGPTKPGPGKCHGIQCTANINGECPGSLRVPG-----GCNN  146 (208)
T ss_dssp             SSC-CCSSCCEEEEEEEEG-GGEEEEEEECTTCBSSCEEEEESSCCSTTCSCEEECSCHHHHCCTTTEETT-----EECC
T ss_pred             CCC-CCCCcceEEEEeccC-CCcceeccccccccccceEEeccCCCCCCcCcccccCCccccCCHhhccCC-----CCcc
Confidence            996 579999999999976 6799999999999999999999864 5689999999999999999999843     8999


Q ss_pred             hhhccCCCccccCCCCCCCCCCCCchhHHHHHhhCCCccccccCCCCCceeecC--CCeEEEecCC
Q 044059          159 ACLAMQSAKYCCTGQYANPKTCKPTLFANLFKAICPKAYSYAFDDSSSLNKCRA--SRYVITFCPP  222 (223)
Q Consensus       159 aC~a~~~~~~CC~g~~~~p~~C~pt~ys~~fK~~CP~AYsya~Dd~tstftC~~--~~y~vtFCP~  222 (223)
                      ||.+|++|||||+     +++|+|++|+++||++||+||||||||++|||+|++  ++|+|||||.
T Consensus       147 aC~~~~~~~~CCt-----~~~C~pt~ys~~FK~~CP~AYsYa~Dd~sstftC~~g~~~Y~VtFCP~  207 (208)
T d1auna_         147 PCTTFGGQQYCCT-----QGPCGPTELSRWFKQRCPDAYSYPQDDPTSTFTCTSWTTDYKVMFCPY  207 (208)
T ss_dssp             HHHHTCSHHHHCT-----TSCCCCCHHHHHHHHHCTTSBCSTTCCTTTCEEEETTSCCEEEEESTT
T ss_pred             ceeecCCCccccC-----CCcCCCchHHHHHHhhCCcccccCcCCCCcceEcCCCCCCEEEEeCCC
Confidence            9999999999997     468999999999999999999999999999999986  7999999995



>d1du5a_ b.25.1.1 (A:) Zeamatin {Maize (Zea mays) [TaxId: 4577]} Back     information, alignment and structure
>d1rqwa_ b.25.1.1 (A:) Thaumatin {Ketemfe (Thaumatococcus daniellii) [TaxId: 4621]} Back     information, alignment and structure