Citrus Sinensis ID: 044126
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 333 | 2.2.26 [Sep-21-2011] | |||||||
| Q39547 | 731 | Cucumisin OS=Cucumis melo | N/A | no | 0.834 | 0.380 | 0.510 | 4e-76 | |
| Q9LLL8 | 749 | Xylem serine proteinase 1 | no | no | 0.852 | 0.379 | 0.463 | 1e-61 | |
| O65351 | 757 | Subtilisin-like protease | no | no | 0.831 | 0.365 | 0.423 | 5e-57 | |
| O64495 | 775 | Subtilisin-like protease | no | no | 0.879 | 0.378 | 0.390 | 6e-49 | |
| P29141 | 806 | Minor extracellular prote | yes | no | 0.516 | 0.213 | 0.348 | 1e-12 | |
| O31788 | 442 | Serine protease AprX OS=B | no | no | 0.345 | 0.260 | 0.385 | 3e-11 | |
| P41363 | 361 | Thermostable alkaline pro | no | no | 0.261 | 0.240 | 0.368 | 4e-07 | |
| P00782 | 382 | Subtilisin BPN' OS=Bacill | no | no | 0.249 | 0.217 | 0.354 | 6e-07 | |
| Q99405 | 380 | M-protease OS=Bacillus cl | no | no | 0.219 | 0.192 | 0.391 | 3e-06 | |
| P27693 | 380 | Alkaline protease OS=Baci | N/A | no | 0.219 | 0.192 | 0.391 | 3e-06 |
| >sp|Q39547|CUCM1_CUCME Cucumisin OS=Cucumis melo PE=1 SV=1 | Back alignment and function desciption |
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Score = 285 bits (729), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 145/284 (51%), Positives = 194/284 (68%), Gaps = 6/284 (2%)
Query: 39 KNPQAEILKTSVIKDSDAPIVASFSSRGPNKYVPDILKPDISAPGVNILAAYSPLAPVSR 98
++P A I K++ I ++ AP+V SFSSRGPN+ D++KPDIS PGV ILAA+ +APV
Sbjct: 452 RSPGATIFKSTTILNASAPVVVSFSSRGPNRATKDVIKPDISGPGVEILAAWPSVAPVG- 510
Query: 99 DIEDERHVKYNIISGTSMACPHAAGVAAYVKSFHPDWSPSAIKSAIMTTAWPMNSSKNTQ 158
R+ +NIISGTSM+CPH G+A YVK+++P WSP+AIKSA+MTTA PMN+ N Q
Sbjct: 511 --GIRRNTLFNIISGTSMSCPHITGIATYVKTYNPTWSPAAIKSALMTTASPMNARFNPQ 568
Query: 159 AEFAYGSGHINPVKAINPGLVYGAFKQDYINMLCSMGYDVDKLRTISGDNSTCSKGSEKT 218
AEFAYGSGH+NP+KA+ PGLVY A + DY+ LC GY+ +R I+GD S C+ G+
Sbjct: 569 AEFAYGSGHVNPLKAVRPGLVYDANESDYVKFLCGQGYNTQAVRRITGDYSACTSGNTGR 628
Query: 219 SPKDLNYPSMAAQVSSGESFTIKFPRTVTNIGLPNSTYKAGILQNSKISVNVVPEVLSFR 278
DLNYPS VS ++F F RT+T++ STY+A I ++++V P VLSF
Sbjct: 629 V-WDLNYPSFGLSVSPSQTFNQYFNRTLTSVAPQASTYRAMISAPQGLTISVNPNVLSFN 687
Query: 279 SLNEKKSFIVTVTGKGLASGSIVSAALVWFDGSRIVRSPIVVHS 322
L ++KSF +TV +G G +VSA+LVW DG VRSPI + S
Sbjct: 688 GLGDRKSFTLTV--RGSIKGFVVSASLVWSDGVHYVRSPITITS 729
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Cucumis melo (taxid: 3656) EC: 3EC: .EC: 4EC: .EC: 2EC: 1EC: .EC: 2EC: 5 |
| >sp|Q9LLL8|XSP1_ARATH Xylem serine proteinase 1 OS=Arabidopsis thaliana GN=XSP1 PE=2 SV=1 | Back alignment and function description |
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| >sp|O65351|SUBL_ARATH Subtilisin-like protease OS=Arabidopsis thaliana GN=ARA12 PE=1 SV=1 | Back alignment and function description |
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| >sp|O64495|SDD1_ARATH Subtilisin-like protease SDD1 OS=Arabidopsis thaliana GN=SDD1 PE=2 SV=1 | Back alignment and function description |
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| >sp|P29141|SUBV_BACSU Minor extracellular protease vpr OS=Bacillus subtilis (strain 168) GN=vpr PE=1 SV=1 | Back alignment and function description |
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| >sp|O31788|APRX_BACSU Serine protease AprX OS=Bacillus subtilis (strain 168) GN=aprX PE=1 SV=1 | Back alignment and function description |
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| >sp|P41363|ELYA_BACHD Thermostable alkaline protease OS=Bacillus halodurans (strain ATCC BAA-125 / DSM 18197 / FERM 7344 / JCM 9153 / C-125) GN=BH0855 PE=1 SV=2 | Back alignment and function description |
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| >sp|P00782|SUBT_BACAM Subtilisin BPN' OS=Bacillus amyloliquefaciens GN=apr PE=1 SV=1 | Back alignment and function description |
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| >sp|Q99405|PRTM_BACSK M-protease OS=Bacillus clausii (strain KSM-K16) GN=aprE PE=1 SV=2 | Back alignment and function description |
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| >sp|P27693|ELYA_BACAO Alkaline protease OS=Bacillus alcalophilus PE=1 SV=1 | Back alignment and function description |
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Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 333 | ||||||
| 224106379 | 710 | predicted protein [Populus trichocarpa] | 0.861 | 0.404 | 0.648 | 1e-104 | |
| 297745991 | 705 | unnamed protein product [Vitis vinifera] | 0.888 | 0.419 | 0.624 | 1e-104 | |
| 359478595 | 717 | PREDICTED: cucumisin-like [Vitis vinifer | 0.888 | 0.412 | 0.624 | 1e-104 | |
| 296083990 | 741 | unnamed protein product [Vitis vinifera] | 0.945 | 0.425 | 0.569 | 1e-100 | |
| 359479070 | 744 | PREDICTED: cucumisin-like [Vitis vinifer | 0.945 | 0.423 | 0.569 | 1e-100 | |
| 297746066 | 703 | unnamed protein product [Vitis vinifera] | 0.852 | 0.403 | 0.630 | 7e-98 | |
| 359478633 | 740 | PREDICTED: cucumisin [Vitis vinifera] | 0.852 | 0.383 | 0.630 | 7e-98 | |
| 147846613 | 668 | hypothetical protein VITISV_010797 [Viti | 0.852 | 0.425 | 0.630 | 8e-98 | |
| 255558936 | 2072 | peptidase, putative [Ricinus communis] g | 0.828 | 0.133 | 0.635 | 9e-98 | |
| 147822196 | 683 | hypothetical protein VITISV_027754 [Viti | 0.849 | 0.414 | 0.609 | 2e-97 |
| >gi|224106379|ref|XP_002314147.1| predicted protein [Populus trichocarpa] gi|222850555|gb|EEE88102.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 186/287 (64%), Positives = 224/287 (78%)
Query: 38 TKNPQAEILKTSVIKDSDAPIVASFSSRGPNKYVPDILKPDISAPGVNILAAYSPLAPVS 97
TK P A ILK+ IKD+ AP VASFSSRGPN + DILKPD SAPGV+ILAA+ P+ +
Sbjct: 414 TKKPSANILKSEAIKDNAAPEVASFSSRGPNPIISDILKPDASAPGVDILAAFPPVLSPT 473
Query: 98 RDIEDERHVKYNIISGTSMACPHAAGVAAYVKSFHPDWSPSAIKSAIMTTAWPMNSSKNT 157
D D+RHVKY+++SGTSMACPHAAGVAA+VK+ HPDWS SAIKSAIMTTAWPMN ++ +
Sbjct: 474 DDTADKRHVKYSVMSGTSMACPHAAGVAAHVKAAHPDWSASAIKSAIMTTAWPMNVTERS 533
Query: 158 QAEFAYGSGHINPVKAINPGLVYGAFKQDYINMLCSMGYDVDKLRTISGDNSTCSKGSEK 217
+ EFA+GSGH+NPV AI+PGLVY K DYI + C +GY +K+R ISGDNS+CSK +
Sbjct: 534 EGEFAFGSGHVNPVTAIHPGLVYETQKSDYIQLFCGLGYTAEKIRQISGDNSSCSKAARN 593
Query: 218 TSPKDLNYPSMAAQVSSGESFTIKFPRTVTNIGLPNSTYKAGILQNSKISVNVVPEVLSF 277
T P+DLNYPSMAA+V+ ESFTIKF RTVTN+G NSTYKA I S + + VVPE LSF
Sbjct: 594 TLPRDLNYPSMAAKVAVEESFTIKFHRTVTNVGNANSTYKAKIFSRSSLKIKVVPEALSF 653
Query: 278 RSLNEKKSFIVTVTGKGLASGSIVSAALVWFDGSRIVRSPIVVHSQG 324
+SL EKKSF VT+ G+ L SI+SA+LVW DGS VRSPIVV+ G
Sbjct: 654 KSLKEKKSFAVTIVGRDLTYNSILSASLVWSDGSHSVRSPIVVYGGG 700
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Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297745991|emb|CBI16047.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|359478595|ref|XP_002280372.2| PREDICTED: cucumisin-like [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|296083990|emb|CBI24378.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|359479070|ref|XP_002271624.2| PREDICTED: cucumisin-like [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|297746066|emb|CBI16122.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|359478633|ref|XP_002280951.2| PREDICTED: cucumisin [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|147846613|emb|CAN81645.1| hypothetical protein VITISV_010797 [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|255558936|ref|XP_002520491.1| peptidase, putative [Ricinus communis] gi|223540333|gb|EEF41904.1| peptidase, putative [Ricinus communis] | Back alignment and taxonomy information |
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| >gi|147822196|emb|CAN62173.1| hypothetical protein VITISV_027754 [Vitis vinifera] | Back alignment and taxonomy information |
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Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 333 | ||||||
| TAIR|locus:2102807 | 736 | AT3G46850 "AT3G46850" [Arabido | 0.945 | 0.427 | 0.558 | 4e-90 | |
| TAIR|locus:2153296 | 741 | AT5G59100 "AT5G59100" [Arabido | 0.861 | 0.387 | 0.584 | 2e-88 | |
| TAIR|locus:2102792 | 738 | AT3G46840 "AT3G46840" [Arabido | 0.852 | 0.384 | 0.593 | 5.3e-88 | |
| TAIR|locus:2168524 | 693 | AT5G59190 "AT5G59190" [Arabido | 0.837 | 0.402 | 0.6 | 2.9e-87 | |
| TAIR|locus:2168434 | 732 | SBT4.13 "AT5G59120" [Arabidops | 0.846 | 0.385 | 0.568 | 1.9e-83 | |
| TAIR|locus:2154513 | 701 | AT5G58830 "AT5G58830" [Arabido | 0.873 | 0.415 | 0.568 | 1e-82 | |
| TAIR|locus:2154528 | 713 | AT5G58840 "AT5G58840" [Arabido | 0.882 | 0.412 | 0.536 | 1.2e-81 | |
| TAIR|locus:2153291 | 736 | SBT4.12 "AT5G59090" [Arabidops | 0.837 | 0.379 | 0.557 | 2e-79 | |
| TAIR|locus:2168444 | 732 | AT5G59130 "AT5G59130" [Arabido | 0.834 | 0.379 | 0.567 | 2.1e-77 | |
| TAIR|locus:2154503 | 703 | AT5G58820 "AT5G58820" [Arabido | 0.861 | 0.408 | 0.535 | 7.1e-77 |
| TAIR|locus:2102807 AT3G46850 "AT3G46850" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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Score = 899 (321.5 bits), Expect = 4.0e-90, P = 4.0e-90
Identities = 181/324 (55%), Positives = 233/324 (71%)
Query: 2 LRSPYEIIGLIKLDWCIKVWCEEEEARLADAIIGSDTKNPQAEILKTSVIKDSDAPIVAS 61
+R+PYE + + + V E++ + + + S TKNP+A +LK+ I + AP+VAS
Sbjct: 419 VRNPYEDAASV-FSFPVSV-LSEDDYNIVLSYVNS-TKNPKAAVLKSETIFNQKAPVVAS 475
Query: 62 FSSRGPNKYVPDILKPDISAPGVNILAAYSPLAPVSRDIEDERHVKYNIISGTSMACPHA 121
+SSRGPN + DILKPDI+APG ILAAYSP P S D RHVKY +ISGTSM+CPH
Sbjct: 476 YSSRGPNPLIHDILKPDITAPGSEILAAYSPYVPPSES--DTRHVKYTVISGTSMSCPHV 533
Query: 122 AGVAAYVKSFHPDWSPSAIKSAIMTTAWPMNSS---KNTQAEFAYGSGHINPVKAINPGL 178
AGVAAY+K+FHP WSPS I+SAIMTTAWPMN+S N AEFAYG+GH++P+ AI+PGL
Sbjct: 534 AGVAAYIKTFHPLWSPSMIQSAIMTTAWPMNASTSPSNELAEFAYGAGHVDPIAAIHPGL 593
Query: 179 VYGAFKQDYINMLCSMGYDVDKLRTISGDNSTCSKGSEKTSPKDLNYPSMAAQVSSGESF 238
VY A K D+I LC Y KLR ISGD+S+C+K K+ ++LNYPSM+AQVS + F
Sbjct: 594 VYEANKSDHITFLCGFNYTGKKLRLISGDSSSCTKEQTKSLTRNLNYPSMSAQVSGTKPF 653
Query: 239 TIKFPRTVTNIGLPNSTYKAGILQNSKISVNVVPEVLSFRSLNEKKSFIVTVTGKGLASG 298
+ F RTVTN+G PN+TYKA ++ SK+ V VVP VLS +SL EKKSF VTV+G G +
Sbjct: 654 KVTFRRTVTNVGRPNATYKAKVV-GSKLKVKVVPAVLSLKSLYEKKSFTVTVSGAGPKAE 712
Query: 299 SIVSAALVWFDGSRIVRSPIVVHS 322
++VSA L+W DG VRSPIVV++
Sbjct: 713 NLVSAQLIWSDGVHFVRSPIVVYA 736
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| TAIR|locus:2153296 AT5G59100 "AT5G59100" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2102792 AT3G46840 "AT3G46840" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2168524 AT5G59190 "AT5G59190" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2168434 SBT4.13 "AT5G59120" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2154513 AT5G58830 "AT5G58830" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2154528 AT5G58840 "AT5G58840" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2153291 SBT4.12 "AT5G59090" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2168444 AT5G59130 "AT5G59130" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2154503 AT5G58820 "AT5G58820" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
No confident hit for EC number transfering in SWISSPROT detected by BLAST
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
No EC number assignment, probably not an enzyme!
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
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 | GSVIVG00024221001 | SubName- Full=Chromosome chr6 scaffold_3, whole genome shotgun sequence; (705 aa) | ||||||
(Vitis vinifera) | ||||||||
| Sorry, there are no predicted associations at the current settings. |
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 333 | |||
| cd04852 | 307 | cd04852, Peptidases_S8_3, Peptidase S8 family doma | 3e-37 | |
| cd07474 | 295 | cd07474, Peptidases_S8_subtilisin_Vpr-like, Peptid | 2e-26 | |
| cd07490 | 254 | cd07490, Peptidases_S8_6, Peptidase S8 family doma | 8e-18 | |
| pfam00082 | 277 | pfam00082, Peptidase_S8, Subtilase family | 8e-18 | |
| cd07487 | 264 | cd07487, Peptidases_S8_1, Peptidase S8 family doma | 2e-17 | |
| cd07489 | 312 | cd07489, Peptidases_S8_5, Peptidase S8 family doma | 6e-17 | |
| cd07475 | 346 | cd07475, Peptidases_S8_C5a_Peptidase, Peptidase S8 | 1e-16 | |
| cd07477 | 229 | cd07477, Peptidases_S8_Subtilisin_subset, Peptidas | 9e-16 | |
| cd04842 | 293 | cd04842, Peptidases_S8_Kp43_protease, Peptidase S8 | 2e-14 | |
| cd00306 | 241 | cd00306, Peptidases_S8_S53, Peptidase domain in th | 2e-14 | |
| cd07473 | 259 | cd07473, Peptidases_S8_Subtilisin_like, Peptidase | 2e-14 | |
| cd04077 | 255 | cd04077, Peptidases_S8_PCSK9_ProteinaseK_like, Pep | 2e-14 | |
| cd07478 | 455 | cd07478, Peptidases_S8_CspA-like, Peptidase S8 fam | 2e-13 | |
| cd07481 | 264 | cd07481, Peptidases_S8_BacillopeptidaseF-like, Pep | 2e-12 | |
| cd07484 | 260 | cd07484, Peptidases_S8_Thermitase_like, Peptidase | 3e-12 | |
| cd05562 | 275 | cd05562, Peptidases_S53_like, Peptidase domain in | 9e-11 | |
| TIGR03921 | 350 | TIGR03921, T7SS_mycosin, type VII secretion-associ | 3e-10 | |
| cd07480 | 297 | cd07480, Peptidases_S8_12, Peptidase S8 family dom | 1e-09 | |
| COG1404 | 508 | COG1404, AprE, Subtilisin-like serine proteases [P | 3e-08 | |
| cd07498 | 242 | cd07498, Peptidases_S8_15, Peptidase S8 family dom | 1e-07 | |
| cd07493 | 261 | cd07493, Peptidases_S8_9, Peptidase S8 family doma | 1e-07 | |
| cd07496 | 285 | cd07496, Peptidases_S8_13, Peptidase S8 family dom | 2e-07 | |
| cd07485 | 273 | cd07485, Peptidases_S8_Fervidolysin_like, Peptidas | 3e-07 | |
| cd07483 | 291 | cd07483, Peptidases_S8_Subtilisin_Novo-like, Pepti | 7e-07 | |
| cd07497 | 311 | cd07497, Peptidases_S8_14, Peptidase S8 family dom | 2e-06 | |
| cd04848 | 267 | cd04848, Peptidases_S8_Autotransporter_serine_prot | 1e-05 | |
| PTZ00262 | 639 | PTZ00262, PTZ00262, subtilisin-like protease; Prov | 4e-05 | |
| cd05561 | 239 | cd05561, Peptidases_S8_4, Peptidase S8 family doma | 3e-04 | |
| cd07479 | 255 | cd07479, Peptidases_S8_SKI-1_like, Peptidase S8 fa | 8e-04 | |
| cd04857 | 412 | cd04857, Peptidases_S8_Tripeptidyl_Aminopeptidase_ | 0.002 | |
| cd04847 | 291 | cd04847, Peptidases_S8_Subtilisin_like_2, Peptidas | 0.002 | |
| cd07492 | 222 | cd07492, Peptidases_S8_8, Peptidase S8 family doma | 0.003 |
| >gnl|CDD|173795 cd04852, Peptidases_S8_3, Peptidase S8 family domain, uncharacterized subfamily 3 | Back alignment and domain information |
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Score = 135 bits (341), Expect = 3e-37
Identities = 48/75 (64%), Positives = 57/75 (76%), Gaps = 3/75 (4%)
Query: 75 LKPDISAPGVNILAAYSPLAPVSRDIEDERHVKYNIISGTSMACPHAAGVAAYVKSFHPD 134
LKPDI+APGV+ILAA++P D D R + ISGTSMA PH AGVAA +KS HPD
Sbjct: 236 LKPDIAAPGVDILAAWTPE---GADPGDARGEDFAFISGTSMASPHVAGVAALLKSAHPD 292
Query: 135 WSPSAIKSAIMTTAW 149
WSP+AIKSA+MTTA+
Sbjct: 293 WSPAAIKSALMTTAY 307
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This family is a member of the Peptidases S8 or Subtilases serine endo- and exo-peptidase clan. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of subtilases may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values. Length = 307 |
| >gnl|CDD|173800 cd07474, Peptidases_S8_subtilisin_Vpr-like, Peptidase S8 family domain in Vpr-like proteins | Back alignment and domain information |
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| >gnl|CDD|173815 cd07490, Peptidases_S8_6, Peptidase S8 family domain, uncharacterized subfamily 6 | Back alignment and domain information |
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| >gnl|CDD|215701 pfam00082, Peptidase_S8, Subtilase family | Back alignment and domain information |
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| >gnl|CDD|173812 cd07487, Peptidases_S8_1, Peptidase S8 family domain, uncharacterized subfamily 1 | Back alignment and domain information |
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| >gnl|CDD|173814 cd07489, Peptidases_S8_5, Peptidase S8 family domain, uncharacterized subfamily 5 | Back alignment and domain information |
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| >gnl|CDD|173801 cd07475, Peptidases_S8_C5a_Peptidase, Peptidase S8 family domain in Streptococcal C5a peptidases | Back alignment and domain information |
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| >gnl|CDD|173803 cd07477, Peptidases_S8_Subtilisin_subset, Peptidase S8 family domain in Subtilisin proteins | Back alignment and domain information |
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| >gnl|CDD|173791 cd04842, Peptidases_S8_Kp43_protease, Peptidase S8 family domain in Kp43 proteases | Back alignment and domain information |
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| >gnl|CDD|173787 cd00306, Peptidases_S8_S53, Peptidase domain in the S8 and S53 families | Back alignment and domain information |
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| >gnl|CDD|173799 cd07473, Peptidases_S8_Subtilisin_like, Peptidase S8 family domain in Subtilisin-like proteins | Back alignment and domain information |
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| >gnl|CDD|173790 cd04077, Peptidases_S8_PCSK9_ProteinaseK_like, Peptidase S8 family domain in ProteinaseK-like proteins | Back alignment and domain information |
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| >gnl|CDD|173804 cd07478, Peptidases_S8_CspA-like, Peptidase S8 family domain in CspA-like proteins | Back alignment and domain information |
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| >gnl|CDD|173807 cd07481, Peptidases_S8_BacillopeptidaseF-like, Peptidase S8 family domain in BacillopeptidaseF-like proteins | Back alignment and domain information |
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| >gnl|CDD|173810 cd07484, Peptidases_S8_Thermitase_like, Peptidase S8 family domain in Thermitase-like proteins | Back alignment and domain information |
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| >gnl|CDD|173798 cd05562, Peptidases_S53_like, Peptidase domain in the S53 family | Back alignment and domain information |
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| >gnl|CDD|234398 TIGR03921, T7SS_mycosin, type VII secretion-associated serine protease mycosin | Back alignment and domain information |
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| >gnl|CDD|173806 cd07480, Peptidases_S8_12, Peptidase S8 family domain, uncharacterized subfamily 12 | Back alignment and domain information |
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| >gnl|CDD|224322 COG1404, AprE, Subtilisin-like serine proteases [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
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| >gnl|CDD|173822 cd07498, Peptidases_S8_15, Peptidase S8 family domain, uncharacterized subfamily 15 | Back alignment and domain information |
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| >gnl|CDD|173818 cd07493, Peptidases_S8_9, Peptidase S8 family domain, uncharacterized subfamily 9 | Back alignment and domain information |
|---|
| >gnl|CDD|173820 cd07496, Peptidases_S8_13, Peptidase S8 family domain, uncharacterized subfamily 13 | Back alignment and domain information |
|---|
| >gnl|CDD|173811 cd07485, Peptidases_S8_Fervidolysin_like, Peptidase S8 family domain in Fervidolysin | Back alignment and domain information |
|---|
| >gnl|CDD|173809 cd07483, Peptidases_S8_Subtilisin_Novo-like, Peptidase S8 family domain in Subtilisin_Novo-like proteins | Back alignment and domain information |
|---|
| >gnl|CDD|173821 cd07497, Peptidases_S8_14, Peptidase S8 family domain, uncharacterized subfamily 14 | Back alignment and domain information |
|---|
| >gnl|CDD|173794 cd04848, Peptidases_S8_Autotransporter_serine_protease_like, Peptidase S8 family domain in Autotransporter serine proteases | Back alignment and domain information |
|---|
| >gnl|CDD|240338 PTZ00262, PTZ00262, subtilisin-like protease; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|173797 cd05561, Peptidases_S8_4, Peptidase S8 family domain, uncharacterized subfamily 4 | Back alignment and domain information |
|---|
| >gnl|CDD|173805 cd07479, Peptidases_S8_SKI-1_like, Peptidase S8 family domain in SKI-1-like proteins | Back alignment and domain information |
|---|
| >gnl|CDD|173796 cd04857, Peptidases_S8_Tripeptidyl_Aminopeptidase_II, Peptidase S8 family domain in Tripeptidyl aminopeptidases_II | Back alignment and domain information |
|---|
| >gnl|CDD|173793 cd04847, Peptidases_S8_Subtilisin_like_2, Peptidase S8 family domain in Subtilisin-like proteins | Back alignment and domain information |
|---|
| >gnl|CDD|173817 cd07492, Peptidases_S8_8, Peptidase S8 family domain, uncharacterized subfamily 8 | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 333 | |||
| cd05562 | 275 | Peptidases_S53_like Peptidase domain in the S53 fa | 99.82 | |
| cd07478 | 455 | Peptidases_S8_CspA-like Peptidase S8 family domain | 99.79 | |
| cd07474 | 295 | Peptidases_S8_subtilisin_Vpr-like Peptidase S8 fam | 99.79 | |
| cd07497 | 311 | Peptidases_S8_14 Peptidase S8 family domain, uncha | 99.77 | |
| cd07475 | 346 | Peptidases_S8_C5a_Peptidase Peptidase S8 family do | 99.77 | |
| cd07479 | 255 | Peptidases_S8_SKI-1_like Peptidase S8 family domai | 99.75 | |
| cd07489 | 312 | Peptidases_S8_5 Peptidase S8 family domain, unchar | 99.74 | |
| cd05561 | 239 | Peptidases_S8_4 Peptidase S8 family domain, unchar | 99.73 | |
| cd04857 | 412 | Peptidases_S8_Tripeptidyl_Aminopeptidase_II Peptid | 99.72 | |
| PF00082 | 282 | Peptidase_S8: Subtilase family This is family S8 i | 99.72 | |
| PTZ00262 | 639 | subtilisin-like protease; Provisional | 99.71 | |
| cd07493 | 261 | Peptidases_S8_9 Peptidase S8 family domain, unchar | 99.71 | |
| cd04847 | 291 | Peptidases_S8_Subtilisin_like_2 Peptidase S8 famil | 99.71 | |
| cd07481 | 264 | Peptidases_S8_BacillopeptidaseF-like Peptidase S8 | 99.7 | |
| cd07487 | 264 | Peptidases_S8_1 Peptidase S8 family domain, unchar | 99.65 | |
| cd07476 | 267 | Peptidases_S8_thiazoline_oxidase_subtilisin-like_p | 99.63 | |
| cd07483 | 291 | Peptidases_S8_Subtilisin_Novo-like Peptidase S8 fa | 99.61 | |
| cd04843 | 277 | Peptidases_S8_11 Peptidase S8 family domain, uncha | 99.59 | |
| cd04842 | 293 | Peptidases_S8_Kp43_protease Peptidase S8 family do | 99.57 | |
| cd04077 | 255 | Peptidases_S8_PCSK9_ProteinaseK_like Peptidase S8 | 99.57 | |
| cd07490 | 254 | Peptidases_S8_6 Peptidase S8 family domain, unchar | 99.55 | |
| cd07498 | 242 | Peptidases_S8_15 Peptidase S8 family domain, uncha | 99.53 | |
| KOG1114 | 1304 | consensus Tripeptidyl peptidase II [Posttranslatio | 99.53 | |
| cd04852 | 307 | Peptidases_S8_3 Peptidase S8 family domain, unchar | 99.53 | |
| cd07484 | 260 | Peptidases_S8_Thermitase_like Peptidase S8 family | 99.52 | |
| cd07485 | 273 | Peptidases_S8_Fervidolysin_like Peptidase S8 famil | 99.51 | |
| cd07496 | 285 | Peptidases_S8_13 Peptidase S8 family domain, uncha | 99.51 | |
| cd07473 | 259 | Peptidases_S8_Subtilisin_like Peptidase S8 family | 99.51 | |
| cd07494 | 298 | Peptidases_S8_10 Peptidase S8 family domain, uncha | 99.51 | |
| cd07480 | 297 | Peptidases_S8_12 Peptidase S8 family domain, uncha | 99.5 | |
| cd07477 | 229 | Peptidases_S8_Subtilisin_subset Peptidase S8 famil | 99.5 | |
| cd04059 | 297 | Peptidases_S8_Protein_convertases_Kexins_Furin-lik | 99.5 | |
| cd07488 | 247 | Peptidases_S8_2 Peptidase S8 family domain, unchar | 99.43 | |
| cd07492 | 222 | Peptidases_S8_8 Peptidase S8 family domain, unchar | 99.4 | |
| cd07482 | 294 | Peptidases_S8_Lantibiotic_specific_protease Peptid | 99.39 | |
| cd04848 | 267 | Peptidases_S8_Autotransporter_serine_protease_like | 99.38 | |
| KOG4266 | 1033 | consensus Subtilisin kexin isozyme-1/site 1 protea | 99.37 | |
| KOG1153 | 501 | consensus Subtilisin-related protease/Vacuolar pro | 99.35 | |
| cd07491 | 247 | Peptidases_S8_7 Peptidase S8 family domain, unchar | 99.14 | |
| cd00306 | 241 | Peptidases_S8_S53 Peptidase domain in the S8 and S | 99.1 | |
| PF06280 | 112 | DUF1034: Fn3-like domain (DUF1034); InterPro: IPR0 | 98.88 | |
| COG1404 | 508 | AprE Subtilisin-like serine proteases [Posttransla | 98.43 | |
| cd04056 | 361 | Peptidases_S53 Peptidase domain in the S53 family. | 97.46 | |
| PF14874 | 102 | PapD-like: Flagellar-associated PapD-like | 97.05 | |
| cd02133 | 143 | PA_C5a_like PA_C5a_like: Protease-associated domai | 96.65 | |
| PF10633 | 78 | NPCBM_assoc: NPCBM-associated, NEW3 domain of alph | 96.15 | |
| PF11614 | 118 | FixG_C: IG-like fold at C-terminal of FixG, putati | 95.09 | |
| KOG3526 | 629 | consensus Subtilisin-like proprotein convertase [P | 94.24 | |
| PF00345 | 122 | PapD_N: Pili and flagellar-assembly chaperone, Pap | 94.13 | |
| PF06030 | 121 | DUF916: Bacterial protein of unknown function (DUF | 93.46 | |
| COG1470 | 513 | Predicted membrane protein [Function unknown] | 86.93 | |
| COG1470 | 513 | Predicted membrane protein [Function unknown] | 86.86 | |
| PF00635 | 109 | Motile_Sperm: MSP (Major sperm protein) domain; In | 86.82 | |
| TIGR02745 | 434 | ccoG_rdxA_fixG cytochrome c oxidase accessory prot | 83.49 | |
| cd02120 | 126 | PA_subtilisin_like PA_subtilisin_like: Protease-as | 82.63 |
| >cd05562 Peptidases_S53_like Peptidase domain in the S53 family | Back alignment and domain information |
|---|
Probab=99.82 E-value=1.3e-20 Score=178.18 Aligned_cols=98 Identities=35% Similarity=0.390 Sum_probs=82.5
Q ss_pred ecccCCCCCCCCCCCcCCcEEeCCC-ceeeccCCCCCCCcCcccccceeeEEeCCccchHHHHHHHHHHHHhhCCCCCHH
Q 044126 60 ASFSSRGPNKYVPDILKPDISAPGV-NILAAYSPLAPVSRDIEDERHVKYNIISGTSMACPHAAGVAAYVKSFHPDWSPS 138 (333)
Q Consensus 60 a~fSs~Gp~~~~~~~lKPDI~APG~-~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~~~~p~~sp~ 138 (333)
+.|+++||.. +..+||||+|||. ++.+.+.. +.|..++|||||||||||++|||++++|+|++.
T Consensus 176 ~~~~~~~p~~--~~~~~~di~Apgg~~~~~~~~~-------------~~~~~~sGTS~AaP~VaG~aALl~~~~p~lt~~ 240 (275)
T cd05562 176 DPVGIRLPTP--EVRQKPDVTAPDGVNGTVDGDG-------------DGPPNFFGTSAAAPHAAGVAALVLSANPGLTPA 240 (275)
T ss_pred cCCcccCcCC--CCCcCCeEEcCCcccccCCCcC-------------CceeecccchHHHHHHHHHHHHHHHhCCCCCHH
Confidence 3466777764 6789999999975 44444332 478999999999999999999999999999999
Q ss_pred HHHHHHHhcCCCCCCCCCCCCccccCCCCcCccccCC
Q 044126 139 AIKSAIMTTAWPMNSSKNTQAEFAYGSGHINPVKAIN 175 (333)
Q Consensus 139 ~ik~~L~~tA~~~~~~~~~~~~~~~G~G~id~~~A~~ 175 (333)
|||++|+++|+++... ..+..||||+||+.+|++
T Consensus 241 ~v~~~L~~tA~~~~~~---g~d~~~G~G~vda~~Av~ 274 (275)
T cd05562 241 DIRDALRSTALDMGEP---GYDNASGSGLVDADRAVA 274 (275)
T ss_pred HHHHHHHHhCcccCCC---CCCCCcCcCcccHHHHhh
Confidence 9999999999987642 467899999999999986
|
Members of the peptidase S53 (sedolisin) family include endopeptidases and exopeptidases. The S53 family contains a catalytic triad Glu/Asp/Ser with an additional acidic residue Asp in the oxyanion hole, similar to that of Asn in subtilisin. The stability of these enzymes may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values. Characterized sedolisins include Kumamolisin, an extracellular calcium-dependent thermostable endopeptidase from Bacillus. The enzyme is synthesized with a 188 amino acid N-terminal preprotein region which is cleaved after the extraction into the extracellular space with low pH. One kumamolysin paralog, kumamolisin-As, is believed to be a collagenase. TPP1 is a serine protease that functi |
| >cd07478 Peptidases_S8_CspA-like Peptidase S8 family domain in CspA-like proteins | Back alignment and domain information |
|---|
| >cd07474 Peptidases_S8_subtilisin_Vpr-like Peptidase S8 family domain in Vpr-like proteins | Back alignment and domain information |
|---|
| >cd07497 Peptidases_S8_14 Peptidase S8 family domain, uncharacterized subfamily 14 | Back alignment and domain information |
|---|
| >cd07475 Peptidases_S8_C5a_Peptidase Peptidase S8 family domain in Streptococcal C5a peptidases | Back alignment and domain information |
|---|
| >cd07479 Peptidases_S8_SKI-1_like Peptidase S8 family domain in SKI-1-like proteins | Back alignment and domain information |
|---|
| >cd07489 Peptidases_S8_5 Peptidase S8 family domain, uncharacterized subfamily 5 | Back alignment and domain information |
|---|
| >cd05561 Peptidases_S8_4 Peptidase S8 family domain, uncharacterized subfamily 4 | Back alignment and domain information |
|---|
| >cd04857 Peptidases_S8_Tripeptidyl_Aminopeptidase_II Peptidase S8 family domain in Tripeptidyl aminopeptidases_II | Back alignment and domain information |
|---|
| >PF00082 Peptidase_S8: Subtilase family This is family S8 in the peptidase classification | Back alignment and domain information |
|---|
| >PTZ00262 subtilisin-like protease; Provisional | Back alignment and domain information |
|---|
| >cd07493 Peptidases_S8_9 Peptidase S8 family domain, uncharacterized subfamily 9 | Back alignment and domain information |
|---|
| >cd04847 Peptidases_S8_Subtilisin_like_2 Peptidase S8 family domain in Subtilisin-like proteins | Back alignment and domain information |
|---|
| >cd07481 Peptidases_S8_BacillopeptidaseF-like Peptidase S8 family domain in BacillopeptidaseF-like proteins | Back alignment and domain information |
|---|
| >cd07487 Peptidases_S8_1 Peptidase S8 family domain, uncharacterized subfamily 1 | Back alignment and domain information |
|---|
| >cd07476 Peptidases_S8_thiazoline_oxidase_subtilisin-like_protease Peptidase S8 family domain in Thiazoline oxidase/subtilisin-like proteases | Back alignment and domain information |
|---|
| >cd07483 Peptidases_S8_Subtilisin_Novo-like Peptidase S8 family domain in Subtilisin_Novo-like proteins | Back alignment and domain information |
|---|
| >cd04843 Peptidases_S8_11 Peptidase S8 family domain, uncharacterized subfamily 11 | Back alignment and domain information |
|---|
| >cd04842 Peptidases_S8_Kp43_protease Peptidase S8 family domain in Kp43 proteases | Back alignment and domain information |
|---|
| >cd04077 Peptidases_S8_PCSK9_ProteinaseK_like Peptidase S8 family domain in ProteinaseK-like proteins | Back alignment and domain information |
|---|
| >cd07490 Peptidases_S8_6 Peptidase S8 family domain, uncharacterized subfamily 6 | Back alignment and domain information |
|---|
| >cd07498 Peptidases_S8_15 Peptidase S8 family domain, uncharacterized subfamily 15 | Back alignment and domain information |
|---|
| >KOG1114 consensus Tripeptidyl peptidase II [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >cd04852 Peptidases_S8_3 Peptidase S8 family domain, uncharacterized subfamily 3 | Back alignment and domain information |
|---|
| >cd07484 Peptidases_S8_Thermitase_like Peptidase S8 family domain in Thermitase-like proteins | Back alignment and domain information |
|---|
| >cd07485 Peptidases_S8_Fervidolysin_like Peptidase S8 family domain in Fervidolysin | Back alignment and domain information |
|---|
| >cd07496 Peptidases_S8_13 Peptidase S8 family domain, uncharacterized subfamily 13 | Back alignment and domain information |
|---|
| >cd07473 Peptidases_S8_Subtilisin_like Peptidase S8 family domain in Subtilisin-like proteins | Back alignment and domain information |
|---|
| >cd07494 Peptidases_S8_10 Peptidase S8 family domain, uncharacterized subfamily 10 | Back alignment and domain information |
|---|
| >cd07480 Peptidases_S8_12 Peptidase S8 family domain, uncharacterized subfamily 12 | Back alignment and domain information |
|---|
| >cd07477 Peptidases_S8_Subtilisin_subset Peptidase S8 family domain in Subtilisin proteins | Back alignment and domain information |
|---|
| >cd04059 Peptidases_S8_Protein_convertases_Kexins_Furin-like Peptidase S8 family domain in Protein convertases | Back alignment and domain information |
|---|
| >cd07488 Peptidases_S8_2 Peptidase S8 family domain, uncharacterized subfamily 2 | Back alignment and domain information |
|---|
| >cd07492 Peptidases_S8_8 Peptidase S8 family domain, uncharacterized subfamily 8 | Back alignment and domain information |
|---|
| >cd07482 Peptidases_S8_Lantibiotic_specific_protease Peptidase S8 family domain in Lantiobiotic (lanthionine-containing antibiotics) specific proteases | Back alignment and domain information |
|---|
| >cd04848 Peptidases_S8_Autotransporter_serine_protease_like Peptidase S8 family domain in Autotransporter serine proteases | Back alignment and domain information |
|---|
| >KOG4266 consensus Subtilisin kexin isozyme-1/site 1 protease, subtilase superfamily [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >KOG1153 consensus Subtilisin-related protease/Vacuolar protease B [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >cd07491 Peptidases_S8_7 Peptidase S8 family domain, uncharacterized subfamily 7 | Back alignment and domain information |
|---|
| >cd00306 Peptidases_S8_S53 Peptidase domain in the S8 and S53 families | Back alignment and domain information |
|---|
| >PF06280 DUF1034: Fn3-like domain (DUF1034); InterPro: IPR010435 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
| >COG1404 AprE Subtilisin-like serine proteases [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >cd04056 Peptidases_S53 Peptidase domain in the S53 family | Back alignment and domain information |
|---|
| >PF14874 PapD-like: Flagellar-associated PapD-like | Back alignment and domain information |
|---|
| >cd02133 PA_C5a_like PA_C5a_like: Protease-associated domain containing proteins like Streptococcus pyogenes C5a peptidase | Back alignment and domain information |
|---|
| >PF10633 NPCBM_assoc: NPCBM-associated, NEW3 domain of alpha-galactosidase; InterPro: IPR018905 This domain has been named NEW3, but its function is not known | Back alignment and domain information |
|---|
| >PF11614 FixG_C: IG-like fold at C-terminal of FixG, putative oxidoreductase; PDB: 2R39_A | Back alignment and domain information |
|---|
| >KOG3526 consensus Subtilisin-like proprotein convertase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >PF00345 PapD_N: Pili and flagellar-assembly chaperone, PapD N-terminal domain; InterPro: IPR016147 Most Gram-negative bacteria possess a supramolecular structure - the pili - on their surface, which mediates attachment to specific receptors | Back alignment and domain information |
|---|
| >PF06030 DUF916: Bacterial protein of unknown function (DUF916); InterPro: IPR010317 This family consists of putative cell surface proteins, from Firmicutes, of unknown function | Back alignment and domain information |
|---|
| >COG1470 Predicted membrane protein [Function unknown] | Back alignment and domain information |
|---|
| >COG1470 Predicted membrane protein [Function unknown] | Back alignment and domain information |
|---|
| >PF00635 Motile_Sperm: MSP (Major sperm protein) domain; InterPro: IPR000535 Major sperm proteins (MSP) are central components in molecular interactions underlying sperm motility in Caenorhabditis elegans, whose sperm employ an amoebae-like crawling motion using a MSP-containing lamellipod, rather than the flagellar-based swimming motion associated with other sperm | Back alignment and domain information |
|---|
| >TIGR02745 ccoG_rdxA_fixG cytochrome c oxidase accessory protein FixG | Back alignment and domain information |
|---|
| >cd02120 PA_subtilisin_like PA_subtilisin_like: Protease-associated domain containing subtilisin-like proteases | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 333 | ||||
| 3vta_A | 621 | Crystal Structure Of Cucumisin, A Subtilisin-Like E | 4e-77 | ||
| 3i6s_A | 649 | Crystal Structure Of The Plant Subtilisin-Like Prot | 7e-45 | ||
| 3afg_A | 539 | Crystal Structure Of Pron-Tk-Sp From Thermococcus K | 1e-13 | ||
| 3f49_S | 266 | Anion-Triggered Engineered Subtilisin Subt_bacam Le | 4e-08 | ||
| 2sni_E | 275 | Structural Comparison Of Two Serine Proteinase-Prot | 6e-08 | ||
| 1sbi_A | 275 | Subtilisin Bpn' 8397 (E.C. 3.4.21.14) Mutant (M50f, | 6e-08 | ||
| 2sbt_A | 275 | A Comparison Of The Three-Dimensional Structures Of | 6e-08 | ||
| 1dui_A | 266 | Subtilisin Bpn' From Bacillus Amyloliquefaciens, Cr | 7e-08 | ||
| 3cnq_S | 266 | Prosubtilisin Substrate Complex Of Subtilisin Subt_ | 8e-08 | ||
| 1s01_A | 275 | Large Increases In General Stability For Subtilisin | 8e-08 | ||
| 1sue_A | 266 | Subtilisin Bpn' From Bacillus Amyloliquefaciens, Mu | 8e-08 | ||
| 1aqn_A | 275 | Subtilisin Mutant 8324 Length = 275 | 9e-08 | ||
| 1lw6_E | 281 | Crystal Structure Of The Complex Of Subtilisin Bpn' | 9e-08 | ||
| 2sic_E | 275 | Refined Crystal Structure Of The Complex Of Subtili | 9e-08 | ||
| 1yjb_A | 275 | Subtilisin Bpn' 8397+1 (E.C. 3.4.21.14) (Mutant Wit | 1e-07 | ||
| 1s02_A | 275 | Effects Of Engineered Salt Bridges On The Stability | 1e-07 | ||
| 1ak9_A | 275 | Subtilisin Mutant 8321 Length = 275 | 1e-07 | ||
| 1sua_A | 266 | Subtilisin Bpn' Length = 266 | 1e-07 | ||
| 1spb_S | 266 | Subtilisin Bpn' Prosegment (77 Residues) Complexed | 1e-07 | ||
| 1wmd_A | 434 | Crystal Structure Of Alkaline Serine Protease Kp-43 | 1e-07 | ||
| 1sub_A | 275 | Calcium-Independent Subtilisin By Design Length = 2 | 2e-07 | ||
| 1a2q_A | 275 | Subtilisin Bpn' Mutant 7186 Length = 275 | 2e-07 | ||
| 1v5i_A | 275 | Crystal Structure Of Serine Protease Inhibitor Poia | 2e-07 | ||
| 1ubn_A | 275 | Selenosubtilisin Bpn Length = 275 | 2e-07 | ||
| 1gnv_A | 266 | Calcium Independent Subtilisin Bpn' Mutant Length = | 2e-07 | ||
| 1suc_A | 275 | Calcium-Independent Subtilisin By Design Length = 2 | 3e-07 | ||
| 1gns_A | 263 | Subtilisin Bpn' Length = 263 | 3e-07 | ||
| 1wsd_A | 269 | Alkaline M-Protease Form I Crystal Strcuture Length | 6e-07 | ||
| 1st2_A | 275 | The Three-Dimensional Structure Of Bacillus Amyloli | 6e-07 | ||
| 1c9j_A | 269 | Bacillus Lentus Subtilisin K27rN87SV104YN123ST274A | 7e-07 | ||
| 1st3_A | 269 | The Crystal Structure Of The Bacillus Lentus Alkali | 7e-07 | ||
| 1ah2_A | 269 | Serine Protease Pb92 From Bacillus Alcalophilus, Nm | 7e-07 | ||
| 1ndu_A | 269 | Bacillus Lentus Subtilisin Variant S101gV104N Lengt | 7e-07 | ||
| 1ndq_A | 269 | Bacillus Lentus Subtilisin Length = 269 | 7e-07 | ||
| 1v6c_A | 441 | Crystal Structure Of Psychrophilic Subtilisin-like | 2e-06 | ||
| 3qtl_A | 274 | Structural Basis For Dual-Inhibition Mechanism Of A | 2e-06 | ||
| 1cse_E | 274 | The High-Resolution X-Ray Crystal Structure Of The | 2e-06 | ||
| 1yu6_A | 275 | Crystal Structure Of The Subtilisin Carlsberg:omtky | 2e-06 | ||
| 4gi3_A | 275 | Crystal Structure Of Greglin In Complex With Subtil | 2e-06 | ||
| 1c3l_A | 274 | Subtilisin-Carlsberg Complexed With Xenon (8 Bar) L | 2e-06 | ||
| 1c9n_A | 269 | Bacillus Lentus Substilisin Variant (Ser 87) K27rV1 | 2e-06 | ||
| 1iav_A | 269 | Structure On Native (Asn 87) Subtilisin From Bacill | 2e-06 | ||
| 1wmf_A | 434 | Crystal Structure Of Alkaline Serine Protease Kp-43 | 2e-06 | ||
| 1q5p_A | 269 | S156e/s166d Variant Of Bacillus Lentus Subtilisin L | 2e-06 | ||
| 1mee_A | 275 | The Complex Between The Subtilisin From A Mesophili | 2e-06 | ||
| 1scn_E | 276 | Inactivation Of Subtilisin Carlsberg By N-(Tert-But | 2e-06 | ||
| 1c9m_A | 269 | Bacillus Lentus Subtilsin (Ser 87) N76dS103AV104I L | 2e-06 | ||
| 3lpc_A | 340 | Crystal Structure Of A Subtilisin-Like Protease Len | 3e-06 | ||
| 3lpd_A | 339 | Crystal Structure Of A Subtilisin-Like Protease Len | 3e-06 | ||
| 3lpa_A | 340 | Crystal Structure Of A Subtilisin-Like Protease Len | 3e-06 | ||
| 1sel_A | 274 | Crystal Structure Of Selenosubtilisin At 2.0-Angstr | 6e-06 | ||
| 4dww_A | 275 | Crystal Structure Of Nattokinase From Bacillus Subt | 2e-05 | ||
| 1scj_A | 275 | Crystal Structure Of Subtilisin-Propeptide Complex | 2e-05 | ||
| 1bh6_A | 274 | Subtilisin Dy In Complex With The Synthetic Inhibit | 3e-05 | ||
| 2gko_A | 309 | S41 Psychrophilic Protease Length = 309 | 2e-04 | ||
| 2ixt_A | 310 | Sphericase Length = 310 | 3e-04 | ||
| 2b6n_A | 278 | The 1.8 A Crystal Structure Of A Proteinase K Like | 4e-04 | ||
| 3vhq_A | 398 | Crystal Structure Of The Ca6 Site Mutant Of Pro-Sa- | 6e-04 | ||
| 2zwp_A | 398 | Crystal Structure Of Ca3 Site Mutant Of Pro-S324a L | 6e-04 | ||
| 2zwo_A | 398 | Crystal Structure Of Ca2 Site Mutant Of Pro-S324a L | 6e-04 | ||
| 2e1p_A | 398 | Crystal Structure Of Pro-Tk-Subtilisin Length = 398 | 6e-04 | ||
| 4dzt_A | 276 | Aqualysin I: The Crystal Structure Of A Serine Prot | 7e-04 | ||
| 2zrq_A | 329 | Crystal Structure Of S324a-Subtilisin Length = 329 | 7e-04 | ||
| 2z2z_A | 395 | Crystal Structure Of Unautoprocessed Form Of Tk-sub | 7e-04 | ||
| 2z30_A | 320 | Crystal Structure Of Complex Form Between Mat-Tk-Su | 7e-04 | ||
| 3a3p_A | 329 | Crystal Structure Of Complex Between E201aSA-Subtil | 7e-04 | ||
| 2z56_A | 318 | Crystal Structure Of G56s-Propeptide:s324a-Subtilis | 7e-04 |
| >pdb|3VTA|A Chain A, Crystal Structure Of Cucumisin, A Subtilisin-Like Endoprotease From Cucumis Melo L Length = 621 | Back alignment and structure |
|
| >pdb|3I6S|A Chain A, Crystal Structure Of The Plant Subtilisin-Like Protease Sbt3 Length = 649 | Back alignment and structure |
| >pdb|3AFG|A Chain A, Crystal Structure Of Pron-Tk-Sp From Thermococcus Kodakaraensis Length = 539 | Back alignment and structure |
| >pdb|3F49|S Chain S, Anion-Triggered Engineered Subtilisin Subt_bacam Length = 266 | Back alignment and structure |
| >pdb|2SNI|E Chain E, Structural Comparison Of Two Serine Proteinase-Protein Inhibitor Complexes. Eglin-C-Subtilisin Carlsberg And Ci-2- Subtilisin Novo Length = 275 | Back alignment and structure |
| >pdb|1SBI|A Chain A, Subtilisin Bpn' 8397 (E.C. 3.4.21.14) Mutant (M50f, N76d, G169a, Q206c, N218s) Length = 275 | Back alignment and structure |
| >pdb|2SBT|A Chain A, A Comparison Of The Three-Dimensional Structures Of Subtilisin Bpn And Subtilisin Novo Length = 275 | Back alignment and structure |
| >pdb|1DUI|A Chain A, Subtilisin Bpn' From Bacillus Amyloliquefaciens, Crystal Growth Mutant Length = 266 | Back alignment and structure |
| >pdb|3CNQ|S Chain S, Prosubtilisin Substrate Complex Of Subtilisin Subt_bacam Length = 266 | Back alignment and structure |
| >pdb|1S01|A Chain A, Large Increases In General Stability For Subtilisin Bpn(Prime) Through Incremental Changes In The Free Energy Of Unfolding Length = 275 | Back alignment and structure |
| >pdb|1SUE|A Chain A, Subtilisin Bpn' From Bacillus Amyloliquefaciens, Mutant Length = 266 | Back alignment and structure |
| >pdb|1AQN|A Chain A, Subtilisin Mutant 8324 Length = 275 | Back alignment and structure |
| >pdb|1LW6|E Chain E, Crystal Structure Of The Complex Of Subtilisin Bpn' With Chymotrypsin Inhibitor 2 At 1.5 Angstrom Resolution Length = 281 | Back alignment and structure |
| >pdb|2SIC|E Chain E, Refined Crystal Structure Of The Complex Of Subtilisin Bpn' And Streptomyces Subtilisin Inhibitor At 1.8 Angstroms Resolution Length = 275 | Back alignment and structure |
| >pdb|1YJB|A Chain A, Subtilisin Bpn' 8397+1 (E.C. 3.4.21.14) (Mutant With Met 50 Replaced By Phe, Asn 76 Replaced By Asp, Gly 169 Replaced By Ala, Gln 206 Replaced By Cys, Asn 218 Replaced By Ser And Lys 256 Replaced By Tyr) (M50f, N76d, G169a, Q206c, N218s, And K256y) In 35% Dimethylformamide Length = 275 | Back alignment and structure |
| >pdb|1S02|A Chain A, Effects Of Engineered Salt Bridges On The Stability Of Subtilisin Bpn' Length = 275 | Back alignment and structure |
| >pdb|1AK9|A Chain A, Subtilisin Mutant 8321 Length = 275 | Back alignment and structure |
| >pdb|1SUA|A Chain A, Subtilisin Bpn' Length = 266 | Back alignment and structure |
| >pdb|1SPB|S Chain S, Subtilisin Bpn' Prosegment (77 Residues) Complexed With A Mutant Subtilisin Bpn' (266 Residues). Crystal Ph 4.6. Crystallization Temperature 20 C Diffraction Temperature- 160 C Length = 266 | Back alignment and structure |
| >pdb|1WMD|A Chain A, Crystal Structure Of Alkaline Serine Protease Kp-43 From Bacillus Sp. Ksm-Kp43 (1.30 Angstrom, 100 K) Length = 434 | Back alignment and structure |
| >pdb|1SUB|A Chain A, Calcium-Independent Subtilisin By Design Length = 275 | Back alignment and structure |
| >pdb|1A2Q|A Chain A, Subtilisin Bpn' Mutant 7186 Length = 275 | Back alignment and structure |
| >pdb|1V5I|A Chain A, Crystal Structure Of Serine Protease Inhibitor Poia1 In Complex With Subtilisin Bpn' Length = 275 | Back alignment and structure |
| >pdb|1UBN|A Chain A, Selenosubtilisin Bpn Length = 275 | Back alignment and structure |
| >pdb|1GNV|A Chain A, Calcium Independent Subtilisin Bpn' Mutant Length = 266 | Back alignment and structure |
| >pdb|1SUC|A Chain A, Calcium-Independent Subtilisin By Design Length = 275 | Back alignment and structure |
| >pdb|1GNS|A Chain A, Subtilisin Bpn' Length = 263 | Back alignment and structure |
| >pdb|1WSD|A Chain A, Alkaline M-Protease Form I Crystal Strcuture Length = 269 | Back alignment and structure |
| >pdb|1ST2|A Chain A, The Three-Dimensional Structure Of Bacillus Amyloliquefaciens Subtilisin At 1.8 Angstroms And An Analysis Of The Structural Consequences Of Peroxide Inactivation Length = 275 | Back alignment and structure |
| >pdb|1C9J|A Chain A, Bacillus Lentus Subtilisin K27rN87SV104YN123ST274A Variant Length = 269 | Back alignment and structure |
| >pdb|1ST3|A Chain A, The Crystal Structure Of The Bacillus Lentus Alkaline Protease, Subtilisin Bl, At 1.4 Angstroms Resolution Length = 269 | Back alignment and structure |
| >pdb|1AH2|A Chain A, Serine Protease Pb92 From Bacillus Alcalophilus, Nmr, 18 Structures Length = 269 | Back alignment and structure |
| >pdb|1NDU|A Chain A, Bacillus Lentus Subtilisin Variant S101gV104N Length = 269 | Back alignment and structure |
| >pdb|1NDQ|A Chain A, Bacillus Lentus Subtilisin Length = 269 | Back alignment and structure |
| >pdb|1V6C|A Chain A, Crystal Structure Of Psychrophilic Subtilisin-like Protease Apa1 From Antarctic Psychrotroph Pseudoalteromonas Sp. As-11 Length = 441 | Back alignment and structure |
| >pdb|3QTL|A Chain A, Structural Basis For Dual-Inhibition Mechanism Of A Non-Classical Kazal-Type Serine Protease Inhibitor From Horseshoe Crab In Complex With Subtilisin Length = 274 | Back alignment and structure |
| >pdb|1CSE|E Chain E, The High-Resolution X-Ray Crystal Structure Of The Complex Formed Between Subtilisin Carlsberg And Eglin C, An Elastase Inhibitor From The Leech Hirudo Medicinalis. Structural Analysis, Subtilisin Structure And Interface Geometry Length = 274 | Back alignment and structure |
| >pdb|1YU6|A Chain A, Crystal Structure Of The Subtilisin Carlsberg:omtky3 Complex Length = 275 | Back alignment and structure |
| >pdb|4GI3|A Chain A, Crystal Structure Of Greglin In Complex With Subtilisin Length = 275 | Back alignment and structure |
| >pdb|1C3L|A Chain A, Subtilisin-Carlsberg Complexed With Xenon (8 Bar) Length = 274 | Back alignment and structure |
| >pdb|1C9N|A Chain A, Bacillus Lentus Substilisin Variant (Ser 87) K27rV104YN123ST274A Length = 269 | Back alignment and structure |
| >pdb|1IAV|A Chain A, Structure On Native (Asn 87) Subtilisin From Bacillus Lentus Length = 269 | Back alignment and structure |
| >pdb|1WMF|A Chain A, Crystal Structure Of Alkaline Serine Protease Kp-43 From Bacillus Sp. Ksm-kp43 (oxidized Form, 1.73 Angstrom) Length = 434 | Back alignment and structure |
| >pdb|1Q5P|A Chain A, S156e/s166d Variant Of Bacillus Lentus Subtilisin Length = 269 | Back alignment and structure |
| >pdb|1MEE|A Chain A, The Complex Between The Subtilisin From A Mesophilic Bacterium And The Leech Inhibitor Eglin-C Length = 275 | Back alignment and structure |
| >pdb|1SCN|E Chain E, Inactivation Of Subtilisin Carlsberg By N-(Tert-Butoxycarbonyl-Alanyl- Prolyl-Phenylalanyl)-O-Benzol Hydroxylamine: Formation Of Covalent Enzyme-Inhibitor Linkage In The Form Of A Carbamate Derivative Length = 276 | Back alignment and structure |
| >pdb|1C9M|A Chain A, Bacillus Lentus Subtilsin (Ser 87) N76dS103AV104I Length = 269 | Back alignment and structure |
| >pdb|3LPC|A Chain A, Crystal Structure Of A Subtilisin-Like Protease Length = 340 | Back alignment and structure |
| >pdb|3LPD|A Chain A, Crystal Structure Of A Subtilisin-Like Protease Length = 339 | Back alignment and structure |
| >pdb|3LPA|A Chain A, Crystal Structure Of A Subtilisin-Like Protease Length = 340 | Back alignment and structure |
| >pdb|1SEL|A Chain A, Crystal Structure Of Selenosubtilisin At 2.0-Angstroms Resolution Length = 274 | Back alignment and structure |
| >pdb|4DWW|A Chain A, Crystal Structure Of Nattokinase From Bacillus Subtilis Natto Length = 275 | Back alignment and structure |
| >pdb|1SCJ|A Chain A, Crystal Structure Of Subtilisin-Propeptide Complex Length = 275 | Back alignment and structure |
| >pdb|1BH6|A Chain A, Subtilisin Dy In Complex With The Synthetic Inhibitor N- Benzyloxycarbonyl-Ala-Pro-Phe-Chloromethyl Ketone Length = 274 | Back alignment and structure |
| >pdb|2GKO|A Chain A, S41 Psychrophilic Protease Length = 309 | Back alignment and structure |
| >pdb|2IXT|A Chain A, Sphericase Length = 310 | Back alignment and structure |
| >pdb|2B6N|A Chain A, The 1.8 A Crystal Structure Of A Proteinase K Like Enzyme From A Psychrotroph Serratia Species Length = 278 | Back alignment and structure |
| >pdb|3VHQ|A Chain A, Crystal Structure Of The Ca6 Site Mutant Of Pro-Sa-Subtilisin Length = 398 | Back alignment and structure |
| >pdb|2ZWP|A Chain A, Crystal Structure Of Ca3 Site Mutant Of Pro-S324a Length = 398 | Back alignment and structure |
| >pdb|2ZWO|A Chain A, Crystal Structure Of Ca2 Site Mutant Of Pro-S324a Length = 398 | Back alignment and structure |
| >pdb|2E1P|A Chain A, Crystal Structure Of Pro-Tk-Subtilisin Length = 398 | Back alignment and structure |
| >pdb|4DZT|A Chain A, Aqualysin I: The Crystal Structure Of A Serine Protease From An Extreme Thermophile, Thermus Aquaticus Yt-1 Length = 276 | Back alignment and structure |
| >pdb|2ZRQ|A Chain A, Crystal Structure Of S324a-Subtilisin Length = 329 | Back alignment and structure |
| >pdb|2Z2Z|A Chain A, Crystal Structure Of Unautoprocessed Form Of Tk-subtilisin Soaked By 10mm Cacl2 Length = 395 | Back alignment and structure |
| >pdb|2Z30|A Chain A, Crystal Structure Of Complex Form Between Mat-Tk-Subtilisin And Tk- Propeptide Length = 320 | Back alignment and structure |
| >pdb|3A3P|A Chain A, Crystal Structure Of Complex Between E201aSA-Subtilisin And Tk-Propeptide Length = 329 | Back alignment and structure |
| >pdb|2Z56|A Chain A, Crystal Structure Of G56s-Propeptide:s324a-Subtilisin Complex Length = 318 | Back alignment and structure |
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >3vta_A Cucumisin; subtilisin-like fold, serine protease, hydrolase; HET: DFP NAG FUC BMA MAN; 2.75A {Cucumis melo} Length = 621 | Back alignment and structure |
|---|
Score = 324 bits (831), Expect = e-107
Identities = 144/285 (50%), Positives = 192/285 (67%), Gaps = 6/285 (2%)
Query: 36 SDTKNPQAEILKTSVIKDSDAPIVASFSSRGPNKYVPDILKPDISAPGVNILAAYSPLAP 95
++P A I K++ I ++ AP+V SFSSRGPN+ D++KPDIS PGV ILAA+ +AP
Sbjct: 339 YSIRSPGATIFKSTTILNASAPVVVSFSSRGPNRATKDVIKPDISGPGVEILAAWPSVAP 398
Query: 96 VSRDIEDERHVKYNIISGTSMACPHAAGVAAYVKSFHPDWSPSAIKSAIMTTAWPMNSSK 155
V R+ +NIISGTSM+CPH G+A YVK+++P WSP+AIKSA+MTTA PMN+
Sbjct: 399 VG---GIRRNTLFNIISGTSMSCPHITGIATYVKTYNPTWSPAAIKSALMTTASPMNARF 455
Query: 156 NTQAEFAYGSGHINPVKAINPGLVYGAFKQDYINMLCSMGYDVDKLRTISGDNSTCSKGS 215
N QAEFAYGSGH+NP+KA+ PGLVY A + DY+ LC GY+ +R I+GD S C+ G+
Sbjct: 456 NPQAEFAYGSGHVNPLKAVRPGLVYDANESDYVKFLCGQGYNTQAVRRITGDYSACTSGN 515
Query: 216 EKTSPKDLNYPSMAAQVSSGESFTIKFPRTVTNIGLPNSTYKAGILQNSKISVNVVPEVL 275
DLNYPS VS ++F F RT+T++ STY+A I ++++V P VL
Sbjct: 516 -TGRVWDLNYPSFGLSVSPSQTFNQYFNRTLTSVAPQASTYRAMISAPQGLTISVNPNVL 574
Query: 276 SFRSLNEKKSFIVTVTGKGLASGSIVSAALVWFDGSRIVRSPIVV 320
SF L ++KSF +TV G G +VSA+LVW DG VRSPI +
Sbjct: 575 SFNGLGDRKSFTLTVRGS--IKGFVVSASLVWSDGVHYVRSPITI 617
|
| >3i6s_A Subtilisin-like protease; PA-domain, FN3-domain, hydrolase; HET: NAG FUC; 2.50A {Solanum lycopersicum} PDB: 3i74_A* Length = 649 | Back alignment and structure |
|---|
| >1xf1_A C5A peptidase, SCP; hydrolase; HET: CIT; 1.90A {Streptococcus pyogenes} PDB: 3eif_A* Length = 926 | Back alignment and structure |
|---|
| >3afg_A Subtilisin-like serine protease; propeptide, thermococcus kodakaraensis, hydrolas protease; 2.00A {Thermococcus kodakarensis} Length = 539 | Back alignment and structure |
|---|
| >1r0r_E Subtilisin carlsberg; high resolution, serine protease, protein inhibitor, hydrolase; 1.10A {Bacillus licheniformis} SCOP: c.41.1.1 PDB: 1af4_A* 1be8_A* 1bfk_A 1bfu_A 1be6_A 1oyv_A 1cse_E 1sbc_A 1sca_A 1scb_A 1scd_A 2sec_E 2wuv_A 2wuw_E 1yu6_A 1scn_E* 1c3l_A 1avt_A* 1av7_A* 1sel_A ... Length = 274 | Back alignment and structure |
|---|
| >2ixt_A 36KDA protease; serine protease, sphericase, subtilisin like protease, hydrolase; 0.8A {Bacillus sphaericus} SCOP: c.41.1.1 PDB: 3d43_A 1ea7_A* 2gko_A* Length = 310 | Back alignment and structure |
|---|
| >1to2_E Subtilisin BPN'; serine protease, hydrolase; HET: CIT 15P; 1.30A {Bacillus amyloliquefaciens} SCOP: c.41.1.1 PDB: 1tm1_E* 1tm3_E* 1tm4_E* 1lw6_E* 1tm7_E* 1tmg_E* 1to1_E* 1tm5_E* 1y1k_E* 1y33_E* 1y34_E* 1y3b_E* 1y3c_E* 1y3d_E* 1y3f_E* 1y48_E* 1y4a_E* 1y4d_E 1sup_A* 1sib_E ... Length = 281 | Back alignment and structure |
|---|
| >1gci_A Subtilisin; hydrolase, serine protease; 0.78A {Bacillus lentus} SCOP: c.41.1.1 PDB: 1jea_A 1ndq_A 1svn_A 1tk2_A* 3bx1_A 1ah2_A 1iav_A* 1c9m_A* 1wsd_A 1mpt_A 1ndu_A 1c9j_A 1q5p_A* 1st3_A 1c9n_A* Length = 269 | Back alignment and structure |
|---|
| >3lxu_X Tripeptidyl-peptidase 2; spindle complex, aminopeptidase, hydrolase, phosphoprotein, protease; 3.14A {Drosophila melanogaster} Length = 1354 | Back alignment and structure |
|---|
| >1r6v_A Subtilisin-like serine protease; sandwich domain, propeptide, hydrolase; 1.70A {Fervidobacterium pennivorans} SCOP: c.41.1.1 Length = 671 | Back alignment and structure |
|---|
| >4aks_A PATG, thiazoline oxidase/subtilisin-like protease; hydrolase, patellamide; 2.19A {Prochloron didemni} PDB: 4akt_A Length = 360 | Back alignment and structure |
|---|
| >2x8j_A Intracellular subtilisin protease; hydrolase, serine protease, intracellular proteinase regulat; HET: CSX 1PE; 1.56A {Bacillus clausii} PDB: 2wv7_A 2wwt_A 2xrm_A* Length = 327 | Back alignment and structure |
|---|
| >1wmd_A Protease; alpha-beta hydrolase fold, jelly-roll beta-barrel, hydrolase; 1.30A {Bacillus SP} SCOP: b.18.1.20 c.41.1.1 PDB: 1wme_A 1wmf_A Length = 434 | Back alignment and structure |
|---|
| >1thm_A Thermitase; hydrolase(serine protease); 1.37A {Thermoactinomyces vulgaris} SCOP: c.41.1.1 PDB: 2tec_E 1tec_E 3tec_E Length = 279 | Back alignment and structure |
|---|
| >2iy9_A SUBA; toxin, shiga, plasmid; 1.8A {Escherichia coli} Length = 347 | Back alignment and structure |
|---|
| >3t41_A Epidermin leader peptide processing serine protea; structural genomics, center for structural genomics of infec diseases, csgid; 1.95A {Staphylococcus aureus} PDB: 3qfh_A Length = 471 | Back alignment and structure |
|---|
| >2z30_A TK-subtilisin; thermococcus kodakaraensis, hydrolase; 1.65A {Thermococcus kodakarensis} PDB: 3a3o_A 3a3n_A 2zrq_A 2z57_A 2z56_A 2z58_A 3a3p_A 2z2x_A* 2z2y_A Length = 320 | Back alignment and structure |
|---|
| >1dbi_A AK.1 serine protease; hydrolase; 1.80A {Bacillus SP} SCOP: c.41.1.1 Length = 280 | Back alignment and structure |
|---|
| >3lpc_A APRB2; protease, subtilase, virulence factor, hydrolase; 1.70A {Dichelobacter nodosus} PDB: 3lpa_A 3lpd_A 3ti9_A 3ti7_A Length = 340 | Back alignment and structure |
|---|
| >2z2z_A TK-subtilisin precursor; thermococcus kodakaraensis, hydrolase; 1.87A {Thermococcus kodakarensis} PDB: 2e1p_A 2zwp_A 2zwo_A Length = 395 | Back alignment and structure |
|---|
| >2b6n_A Proteinase K; S binding, substrate specificity, proteinase K, subtilase, psychrotrophic, psychrophilic, hydrolase; 1.80A {Serratia SP} Length = 278 | Back alignment and structure |
|---|
| >1sh7_A Extracellular subtilisin-like serine proteinase; cold adaptation, psychrotrophic, subtilisin-like proteinase, depentent, hydrolase; HET: PMS; 1.84A {Vibrio SP} PDB: 1s2n_A* Length = 284 | Back alignment and structure |
|---|
| >4dzt_A Aqualysin-1, aqualysin-I; serine protease, calcium binding, inhibitor, hydrolase-hydro inhibitor complex; HET: PMS; 1.95A {Thermus aquaticus} Length = 276 | Back alignment and structure |
|---|
| >2qtw_B Proprotein convertase subtilisin/kexin type 9; coronary heart disease, hypercholest low density lipoprotein receptor, autocatalytic cleavage; HET: NAG; 1.90A {Homo sapiens} PDB: 3m0c_B 3bps_A 3gcw_A 3gcx_A 3p5b_A 3p5c_A 2pmw_B 3h42_B 2w2n_A 2w2m_A 2w2p_A 2w2q_A 2xtj_A 2w2o_A Length = 546 | Back alignment and structure |
|---|
| >2p4e_P Proprotein convertase subtilisin/kexin type 9; protease, LDL receptor, LDL, endocytosis, hydrol; 1.98A {Homo sapiens} Length = 692 | Back alignment and structure |
|---|
| >1y9z_A Alkaline serine protease; subtilisin-like alpha/beta domain, insert beta barrel domain hydrolase; HET: PMS; 1.40A {Pseudoalteromonas SP} PDB: 1v6c_A* 1wvm_A* Length = 441 | Back alignment and structure |
|---|
| >1y9z_A Alkaline serine protease; subtilisin-like alpha/beta domain, insert beta barrel domain hydrolase; HET: PMS; 1.40A {Pseudoalteromonas SP} PDB: 1v6c_A* 1wvm_A* Length = 441 | Back alignment and structure |
|---|
| >3f7m_A Alkaline serine protease VER112; verticillium psalliotae, cuticle- degrading protease, nematodes, hydrolase, secreted, zymogen; 1.60A {Lecanicillium psalliotae} PDB: 3f7o_A Length = 279 | Back alignment and structure |
|---|
| >2pwa_A Proteinase K; structure, alanine boronic acid, hydrolase; 0.83A {Engyodontium album} SCOP: c.41.1.1 PDB: 1p7v_A 1p7w_A 2dqk_A 2duj_A 2g4v_A 2hd4_A 2hpz_A 2id8_A 2pq2_A 1ic6_A 2pwb_A* 2pyz_A* 2v8b_A 3aj8_A 3aj9_A 3dyb_A* 3gt3_A* 3gt4_A* 3l1k_A 3osz_A ... Length = 279 | Back alignment and structure |
|---|
| >2id4_A Kexin; KEX2, kexin, furin, proprotein, prohormone, convertase, SUBT like protease, serine protease; HET: NDG; 1.90A {Saccharomyces cerevisiae} SCOP: b.18.1.20 c.41.1.1 PDB: 1r64_A* 1ot5_A* Length = 503 | Back alignment and structure |
|---|
| >1p8j_A Furin precursor; prohormone convertase, SPC1, PACE, P-domain; HET: DKA AR7 NAG FUL BMA MAN GAL FUC; 2.60A {Mus musculus} SCOP: b.18.1.20 c.41.1.1 Length = 471 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 333 | |||
| 3i6s_A | 649 | Subtilisin-like protease; PA-domain, FN3-domain, h | 100.0 | |
| 3vta_A | 621 | Cucumisin; subtilisin-like fold, serine protease, | 100.0 | |
| 1xf1_A | 926 | C5A peptidase, SCP; hydrolase; HET: CIT; 1.90A {St | 100.0 | |
| 3lxu_X | 1354 | Tripeptidyl-peptidase 2; spindle complex, aminopep | 99.91 | |
| 1y9z_A | 441 | Alkaline serine protease; subtilisin-like alpha/be | 99.88 | |
| 3afg_A | 539 | Subtilisin-like serine protease; propeptide, therm | 99.87 | |
| 4h6x_A | 357 | Thiazoline oxidase/subtilisin-like protease; hydro | 99.84 | |
| 1gci_A | 269 | Subtilisin; hydrolase, serine protease; 0.78A {Bac | 99.84 | |
| 1r0r_E | 274 | Subtilisin carlsberg; high resolution, serine prot | 99.83 | |
| 1to2_E | 281 | Subtilisin BPN'; serine protease, hydrolase; HET: | 99.83 | |
| 1wmd_A | 434 | Protease; alpha-beta hydrolase fold, jelly-roll be | 99.83 | |
| 2iy9_A | 347 | SUBA; toxin, shiga, plasmid; 1.8A {Escherichia col | 99.82 | |
| 1dbi_A | 280 | AK.1 serine protease; hydrolase; 1.80A {Bacillus S | 99.82 | |
| 2x8j_A | 327 | Intracellular subtilisin protease; hydrolase, seri | 99.81 | |
| 4h6w_A | 306 | N-terminal cyanobactin protease; hydrolase; 2.45A | 99.81 | |
| 1r6v_A | 671 | Subtilisin-like serine protease; sandwich domain, | 99.8 | |
| 3lpc_A | 340 | APRB2; protease, subtilase, virulence factor, hydr | 99.8 | |
| 2ixt_A | 310 | 36KDA protease; serine protease, sphericase, subti | 99.8 | |
| 3zxy_A | 282 | Subtilisin-like protein; hydrolase; 1.58A {Prochlo | 99.79 | |
| 2z2z_A | 395 | TK-subtilisin precursor; thermococcus kodakaraensi | 99.79 | |
| 1thm_A | 279 | Thermitase; hydrolase(serine protease); 1.37A {The | 99.79 | |
| 3t41_A | 471 | Epidermin leader peptide processing serine protea; | 99.79 | |
| 2z30_A | 320 | TK-subtilisin; thermococcus kodakaraensis, hydrola | 99.78 | |
| 2oxa_A | 600 | Extracellular serine protease; kexin, hydrolase; 1 | 99.78 | |
| 2id4_A | 503 | Kexin; KEX2, kexin, furin, proprotein, prohormone, | 99.73 | |
| 1p8j_A | 471 | Furin precursor; prohormone convertase, SPC1, PACE | 99.72 | |
| 1sh7_A | 284 | Extracellular subtilisin-like serine proteinase; c | 99.7 | |
| 3hjr_A | 600 | Extracellular serine protease; kexin, hydrolase; 1 | 99.69 | |
| 2pwa_A | 279 | Proteinase K; structure, alanine boronic acid, hyd | 99.69 | |
| 4dzt_A | 276 | Aqualysin-1, aqualysin-I; serine protease, calcium | 99.68 | |
| 2b6n_A | 278 | Proteinase K; S binding, substrate specificity, pr | 99.68 | |
| 3f7m_A | 279 | Alkaline serine protease VER112; verticillium psal | 99.62 | |
| 2qtw_B | 546 | Proprotein convertase subtilisin/kexin type 9; cor | 99.61 | |
| 2p4e_P | 692 | Proprotein convertase subtilisin/kexin type 9; pro | 99.59 | |
| 1ga6_A | 372 | Serine-carboxyl proteinase; serine-carboxyl protei | 98.76 | |
| 1t1e_A | 552 | Kumamolisin; proenzyme, prosubtilase, activation m | 98.64 | |
| 2ys4_A | 122 | Hydrocephalus-inducing protein homolog; hydin, PAP | 97.07 | |
| 3edy_A | 544 | Tripeptidyl-peptidase 1; protease, TPP1, sedolisin | 96.1 | |
| 2e6j_A | 112 | Hydin protein; PAPD, structural genomics, NPPSFA, | 92.05 | |
| 2r39_A | 118 | FIXG-related protein; structural GE PSI-2, protein | 91.84 | |
| 2qsv_A | 220 | Uncharacterized protein; MCSG, structural genomics | 91.76 | |
| 3qbt_B | 140 | Inositol polyphosphate 5-phosphatase OCRL-1; prote | 91.08 | |
| 1w8o_A | 601 | Bacterial sialidase; 3D-structure, glycosidase, hy | 80.33 | |
| 3qis_A | 366 | Inositol polyphosphate 5-phosphatase OCRL-1; DENT | 80.24 |
| >3i6s_A Subtilisin-like protease; PA-domain, FN3-domain, hydrolase; HET: NAG FUC; 2.50A {Solanum lycopersicum} PDB: 3i74_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.7e-70 Score=565.09 Aligned_cols=305 Identities=39% Similarity=0.643 Sum_probs=267.4
Q ss_pred ccccceeEeecHHHHHHHHHHHhccCCCCCceee-cceeeeecCCCCeeecccCCCCCCCCCCCcCCcEEeCCCceeecc
Q 044126 12 IKLDWCIKVWCEEEEARLADAIIGSDTKNPQAEI-LKTSVIKDSDAPIVASFSSRGPNKYVPDILKPDISAPGVNILAAY 90 (333)
Q Consensus 12 ~~~~~~~~~~~~~~g~~l~~y~~~~s~~~~~~~i-~~~~~~~~~~~~~va~fSs~Gp~~~~~~~lKPDI~APG~~I~sa~ 90 (333)
..+.+|.++++.++|+.|++|+ +++.+++++| +..++++..+++.+++||||||+...+++|||||+|||++|+++|
T Consensus 323 ~~~~~P~~~v~~~~g~~i~~yi--~s~~~~~a~i~~~~t~~~~~~~~~va~FSSrGP~~~~~~ilKPDI~APG~~Ilsa~ 400 (649)
T 3i6s_A 323 ATFPNPGVVVNKKEGKQVINYV--KNSVTPTATITFQETYLDTKPAPVVAASSARGPSRSYLGISKPDILAPGVLILAAY 400 (649)
T ss_dssp CCCCSCEEEECHHHHHHHHHHH--HTCSSCEEEEEEEEEECCCSSCCEECTTSCCSSCTTCTTSCSCCEEEECSSEEEEC
T ss_pred ccCcCCEEEEcHHHHHHHHHHH--hcCCCceEEEeecceeeccCCCCcccccCCCCCCCCCCCccCCeEEeCCCCeEeec
Confidence 4467899999999999999999 8999999999 788888888999999999999998778999999999999999999
Q ss_pred CCCCCCCcCcccc-cceeeEEeCCccchHHHHHHHHHHHHhhCCCCCHHHHHHHHHhcCCCCCCCC--------C-CCCc
Q 044126 91 SPLAPVSRDIEDE-RHVKYNIISGTSMACPHAAGVAAYVKSFHPDWSPSAIKSAIMTTAWPMNSSK--------N-TQAE 160 (333)
Q Consensus 91 ~~~~~~~~~~~~~-~~~~y~~~sGTSmAaP~VAG~aALl~~~~p~~sp~~ik~~L~~tA~~~~~~~--------~-~~~~ 160 (333)
+..........+. ....|..+||||||||||||++|||||+||+|+|++||++||+||.++.... . ++++
T Consensus 401 ~~~~~~~~~~~d~~~~~~y~~~SGTSMAaPhVAGvaALlks~~P~~Spa~IksaLmtTA~~~~~~g~~i~~~~~~~~a~~ 480 (649)
T 3i6s_A 401 PPNVFATSIGTNILLSTDYILESGTSMAAPHAAGIAAMLKAAHPEWSPSAIRSAMMTTADPLDNTRKPIKDSDNNKAATP 480 (649)
T ss_dssp CTTSCCEEETTTEEECCSEEEECSHHHHHHHHHHHHHHHHHHSTTCCHHHHHHHHHHTCBCBCTTSSBCEETTTSSBCCH
T ss_pred CCCCCccccccccccccceecccccccccHHHHHHHHHHHHhCCCCCHHHHHHHHhcccccccCCCCcccccccCCcCCc
Confidence 9865443333232 3468999999999999999999999999999999999999999998765421 1 5678
Q ss_pred cccCCCCcCccccCCCCccccCchhhHHHHHhcCCCCcccceeccCCCCc--cCCCCCCCCCCCCCCCceeeec-cCCCc
Q 044126 161 FAYGSGHINPVKAINPGLVYGAFKQDYINMLCSMGYDVDKLRTISGDNST--CSKGSEKTSPKDLNYPSMAAQV-SSGES 237 (333)
Q Consensus 161 ~~~G~G~id~~~A~~~~lv~d~~~~dy~~~lc~~~~~~~~i~~~~g~~~~--c~~~~~~~~~~~lN~pSi~~~~-~~~~~ 237 (333)
++||+|+||+.+|++||||||+..+||+.|||++||+..+|+.|+++++. |++ ...+||||||++.+ +.+..
T Consensus 481 ~~~GaG~vn~~~A~~pGLvyd~~~~dy~~flc~~~y~~~~i~~~~~~~~~~~C~~-----~~~~lNyPs~~~~~~~~~~~ 555 (649)
T 3i6s_A 481 LDMGAGHVDPNRALDPGLVYDATPQDYVNLLCSLNFTEEQFKTIARSSASHNCSN-----PSADLNYPSFIALYSIEGNF 555 (649)
T ss_dssp HHHTTCBCCHHHHTCCSEECCCCHHHHHHHHHTTCCCHHHHHHHHTTTSCC-CCC-----CCCCCCCSSEEEEECCSSCC
T ss_pred CCCCeeeeCHHHhcCccccccCCchhHHHhhhcCCCCcccceeeecCCCcCCCCC-----chhhcCCCcEEeecccCCCC
Confidence 99999999999999999999999999999999999999999999998878 975 36799999999987 44211
Q ss_pred ee--EEEEEEEEeccCCCeeEEEEEecCCceEEEEEcCeEEEeeCCcEEEEEEEEEeecCCCCCeEEEEEEEEc--CCce
Q 044126 238 FT--IKFPRTVTNIGLPNSTYKAGILQNSKISVNVVPEVLSFRSLNEKKSFIVTVTGKGLASGSIVSAALVWFD--GSRI 313 (333)
Q Consensus 238 ~~--~t~~rtvtNvg~~~~tY~~~v~~~~g~~v~v~P~~l~~~~~g~~~~~~Vt~~~~~~~~~~~~~G~i~~~~--~~~~ 313 (333)
.. ++|+|||||||+...+|++++++|.|++|+|+|++|+|++.+|+++|+|+|+......+.|.||+|+|+| ++|.
T Consensus 556 ~~~~~~~~Rtvtnvg~~~~~y~~~v~~p~g~~v~v~P~~l~f~~~~~~~~f~v~~~~~~~~~~~~~fg~l~w~~~~~~h~ 635 (649)
T 3i6s_A 556 TLLEQKFKRTVTNVGKGAATYKAKLKAPKNSTISVSPQILVFKNKNEKQSYTLTIRYIGDEGQSRNVGSITWVEQNGNHS 635 (649)
T ss_dssp CCEEEEEEEEEEECC--CEEEEEEEECCTTEEEEEESSEEEECC-CCEEEEEEEEEECCC---CCCEEEEEEEETTSCCE
T ss_pred ccceEEEEEEEEEeCCCCcEEEEEEecCCCCEEEEECCEEEEecCCCEEEEEEEEEecccCCCceEEEEEEEEcCCCCeE
Confidence 12 8999999999998999999999999999999999999988999999999999876555678999999998 9999
Q ss_pred EEeeEEEEee
Q 044126 314 VRSPIVVHSQ 323 (333)
Q Consensus 314 vr~P~~v~~~ 323 (333)
||+||+|+..
T Consensus 636 vrsPi~v~~~ 645 (649)
T 3i6s_A 636 VRSPIVTSPI 645 (649)
T ss_dssp EEEEEEEEEC
T ss_pred EEEeEEEEEc
Confidence 9999999876
|
| >3vta_A Cucumisin; subtilisin-like fold, serine protease, hydrolase; HET: DFP NAG FUC BMA MAN; 2.75A {Cucumis melo} | Back alignment and structure |
|---|
| >1xf1_A C5A peptidase, SCP; hydrolase; HET: CIT; 1.90A {Streptococcus pyogenes} PDB: 3eif_A* | Back alignment and structure |
|---|
| >3lxu_X Tripeptidyl-peptidase 2; spindle complex, aminopeptidase, hydrolase, phosphoprotein, protease; 3.14A {Drosophila melanogaster} | Back alignment and structure |
|---|
| >1y9z_A Alkaline serine protease; subtilisin-like alpha/beta domain, insert beta barrel domain hydrolase; HET: PMS; 1.40A {Pseudoalteromonas SP} PDB: 1v6c_A* 1wvm_A* | Back alignment and structure |
|---|
| >3afg_A Subtilisin-like serine protease; propeptide, thermococcus kodakaraensis, hydrolas protease; 2.00A {Thermococcus kodakarensis} | Back alignment and structure |
|---|
| >4h6x_A Thiazoline oxidase/subtilisin-like protease; hydrolase; 2.00A {Prochloron didemni} PDB: 4aks_A 4akt_A | Back alignment and structure |
|---|
| >1gci_A Subtilisin; hydrolase, serine protease; 0.78A {Bacillus lentus} SCOP: c.41.1.1 PDB: 1jea_A 1ndq_A 1svn_A 1tk2_A* 3bx1_A 1ah2_A 1iav_A* 1c9m_A* 1wsd_A 1mpt_A 1ndu_A 1c9j_A 1q5p_A* 1st3_A 1c9n_A* | Back alignment and structure |
|---|
| >1r0r_E Subtilisin carlsberg; high resolution, serine protease, protein inhibitor, hydrolase; 1.10A {Bacillus licheniformis} SCOP: c.41.1.1 PDB: 1af4_A* 1be8_A* 1bfk_A 1bfu_A 1be6_A 1oyv_A 1cse_E 1sbc_A 1sca_A 1scb_A 1scd_A 2sec_E 2wuv_A 2wuw_E 1yu6_A 1scn_E* 1c3l_A 1avt_A* 1av7_A* 1sel_A ... | Back alignment and structure |
|---|
| >1to2_E Subtilisin BPN'; serine protease, hydrolase; HET: CIT 15P; 1.30A {Bacillus amyloliquefaciens} SCOP: c.41.1.1 PDB: 1tm1_E* 1tm3_E* 1tm4_E* 1lw6_E* 1tm7_E* 1tmg_E* 1to1_E* 1tm5_E* 1y1k_E* 1y33_E* 1y34_E* 1y3b_E* 1y3c_E* 1y3d_E* 1y3f_E* 1y48_E* 1y4a_E* 1y4d_E 1sup_A* 1sib_E ... | Back alignment and structure |
|---|
| >1wmd_A Protease; alpha-beta hydrolase fold, jelly-roll beta-barrel, hydrolase; 1.30A {Bacillus SP} SCOP: b.18.1.20 c.41.1.1 PDB: 1wme_A 1wmf_A | Back alignment and structure |
|---|
| >2iy9_A SUBA; toxin, shiga, plasmid; 1.8A {Escherichia coli} | Back alignment and structure |
|---|
| >1dbi_A AK.1 serine protease; hydrolase; 1.80A {Bacillus SP} SCOP: c.41.1.1 | Back alignment and structure |
|---|
| >2x8j_A Intracellular subtilisin protease; hydrolase, serine protease, intracellular proteinase regulat; HET: CSX 1PE; 1.56A {Bacillus clausii} PDB: 2wv7_A 2wwt_A 2xrm_A* | Back alignment and structure |
|---|
| >4h6w_A N-terminal cyanobactin protease; hydrolase; 2.45A {Planktothrix agardhii nies-596} | Back alignment and structure |
|---|
| >1r6v_A Subtilisin-like serine protease; sandwich domain, propeptide, hydrolase; 1.70A {Fervidobacterium pennivorans} SCOP: c.41.1.1 | Back alignment and structure |
|---|
| >3lpc_A APRB2; protease, subtilase, virulence factor, hydrolase; 1.70A {Dichelobacter nodosus} PDB: 3lpa_A 3lpd_A 3ti9_A 3ti7_A | Back alignment and structure |
|---|
| >2ixt_A 36KDA protease; serine protease, sphericase, subtilisin like protease, hydrolase; 0.8A {Bacillus sphaericus} SCOP: c.41.1.1 PDB: 3d43_A 1ea7_A* 2gko_A* | Back alignment and structure |
|---|
| >3zxy_A Subtilisin-like protein; hydrolase; 1.58A {Prochloron didemni} PDB: 3zxx_A | Back alignment and structure |
|---|
| >2z2z_A TK-subtilisin precursor; thermococcus kodakaraensis, hydrolase; 1.87A {Thermococcus kodakarensis} PDB: 2e1p_A 2zwp_A 2zwo_A | Back alignment and structure |
|---|
| >1thm_A Thermitase; hydrolase(serine protease); 1.37A {Thermoactinomyces vulgaris} SCOP: c.41.1.1 PDB: 2tec_E 1tec_E 3tec_E | Back alignment and structure |
|---|
| >3t41_A Epidermin leader peptide processing serine protea; structural genomics, center for structural genomics of infec diseases, csgid; 1.95A {Staphylococcus aureus} PDB: 3qfh_A | Back alignment and structure |
|---|
| >2z30_A TK-subtilisin; thermococcus kodakaraensis, hydrolase; 1.65A {Thermococcus kodakarensis} PDB: 3a3o_A 3a3n_A 2zrq_A 2z57_A 2z56_A 2z58_A 3a3p_A 2z2x_A* 2z2y_A | Back alignment and structure |
|---|
| >2id4_A Kexin; KEX2, kexin, furin, proprotein, prohormone, convertase, SUBT like protease, serine protease; HET: NDG; 1.90A {Saccharomyces cerevisiae} SCOP: b.18.1.20 c.41.1.1 PDB: 1r64_A* 1ot5_A* | Back alignment and structure |
|---|
| >1p8j_A Furin precursor; prohormone convertase, SPC1, PACE, P-domain; HET: DKA AR7 NAG FUL BMA MAN GAL FUC; 2.60A {Mus musculus} SCOP: b.18.1.20 c.41.1.1 | Back alignment and structure |
|---|
| >1sh7_A Extracellular subtilisin-like serine proteinase; cold adaptation, psychrotrophic, subtilisin-like proteinase, depentent, hydrolase; HET: PMS; 1.84A {Vibrio SP} PDB: 1s2n_A* | Back alignment and structure |
|---|
| >3hjr_A Extracellular serine protease; kexin, hydrolase; 1.65A {Aeromonas sobria} | Back alignment and structure |
|---|
| >2pwa_A Proteinase K; structure, alanine boronic acid, hydrolase; 0.83A {Engyodontium album} SCOP: c.41.1.1 PDB: 1p7v_A 1p7w_A 2dqk_A 2duj_A 2g4v_A 2hd4_A 2hpz_A 2id8_A 2pq2_A 1ic6_A 2pwb_A* 2pyz_A* 2v8b_A 3aj8_A 3aj9_A 3dyb_A* 3gt3_A* 3gt4_A* 3l1k_A 3osz_A ... | Back alignment and structure |
|---|
| >4dzt_A Aqualysin-1, aqualysin-I; serine protease, calcium binding, inhibitor, hydrolase-hydro inhibitor complex; HET: PMS; 1.95A {Thermus aquaticus} | Back alignment and structure |
|---|
| >2b6n_A Proteinase K; S binding, substrate specificity, proteinase K, subtilase, psychrotrophic, psychrophilic, hydrolase; 1.80A {Serratia SP} | Back alignment and structure |
|---|
| >3f7m_A Alkaline serine protease VER112; verticillium psalliotae, cuticle- degrading protease, nematodes, hydrolase, secreted, zymogen; 1.60A {Lecanicillium psalliotae} SCOP: c.41.1.1 PDB: 3f7o_A | Back alignment and structure |
|---|
| >2qtw_B Proprotein convertase subtilisin/kexin type 9; coronary heart disease, hypercholest low density lipoprotein receptor, autocatalytic cleavage; HET: NAG; 1.90A {Homo sapiens} PDB: 3m0c_B 3bps_A 3gcw_A 3gcx_A 3p5b_A 3p5c_A 2pmw_B 3h42_B 2w2n_A 2w2m_A 2w2p_A 2w2q_A 2xtj_A 2w2o_A | Back alignment and structure |
|---|
| >2p4e_P Proprotein convertase subtilisin/kexin type 9; protease, LDL receptor, LDL, endocytosis, hydrol; 1.98A {Homo sapiens} | Back alignment and structure |
|---|
| >1ga6_A Serine-carboxyl proteinase; serine-carboxyl proteinase, hydrolase-hydrolase inhibitor CO; 1.00A {Pseudomonas SP} SCOP: c.41.1.2 PDB: 1ga4_A* 1ga1_A 1kdv_A* 1kdy_A* 1kdz_A* 1ke1_A* 1ke2_A* 1nlu_A* | Back alignment and structure |
|---|
| >1t1e_A Kumamolisin; proenzyme, prosubtilase, activation mechanism, sedolisin, serine-carboxyl proteinase, hydrolase; 1.18A {Bacillus SP} SCOP: c.41.1.2 d.58.3.2 PDB: 1t1g_A 1t1i_A 1gt9_1 1gtg_1 1gtj_1* 1gtl_1* 1sio_A* 1sn7_A 1zvj_A 1siu_A 1zvk_A | Back alignment and structure |
|---|
| >2ys4_A Hydrocephalus-inducing protein homolog; hydin, PAPD-like, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} | Back alignment and structure |
|---|
| >3edy_A Tripeptidyl-peptidase 1; protease, TPP1, sedolisin, batten disease, lincl, zymogen, P exopeptidase, endopeptidase, S53 family, CLN2; HET: NAG; 1.85A {Homo sapiens} PDB: 3ee6_A* | Back alignment and structure |
|---|
| >2e6j_A Hydin protein; PAPD, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} | Back alignment and structure |
|---|
| >2r39_A FIXG-related protein; structural GE PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, iron, iron-sulfur; 2.02A {Vibrio parahaemolyticus} | Back alignment and structure |
|---|
| >2qsv_A Uncharacterized protein; MCSG, structural genomics, porphyromonas gingivalis W83, PSI protein structure initiative; 2.10A {Porphyromonas gingivalis} | Back alignment and structure |
|---|
| >3qbt_B Inositol polyphosphate 5-phosphatase OCRL-1; protein transport, vesicular trafficking, GTPase, LOWE syndr immunoglobulin fold, RAB8A, endocytosis; HET: GNP; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
| >1w8o_A Bacterial sialidase; 3D-structure, glycosidase, hydrolase, beta- propeller; HET: LBT CIT; 1.70A {Micromonospora viridifaciens} SCOP: b.1.18.2 b.18.1.1 b.68.1.1 PDB: 1w8n_A* 1eut_A 1euu_A* 1wcq_A* 2bzd_A* 2ber_A* 1eur_A 1eus_A* | Back alignment and structure |
|---|
| >3qis_A Inositol polyphosphate 5-phosphatase OCRL-1; DENT disease, RAC1, RAB gtpases, APPL1, endocytic PATH golgi complex, hydrolase-protein binding complex; 2.30A {Homo sapiens} PDB: 2qv2_A | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 333 | ||||
| d1v6ca_ | 435 | c.41.1.1 (A:) Alkaline serine protease Apa1 {Pseud | 1e-28 | |
| d1r6va_ | 671 | c.41.1.1 (A:) Fervidolysin {Fervidobacterium penni | 1e-18 | |
| d1r0re_ | 274 | c.41.1.1 (E:) Subtilisin {Bacillus subtilis, carls | 2e-15 | |
| d1gcia_ | 269 | c.41.1.1 (A:) Subtilisin {Bacillus lentus [TaxId: | 5e-15 | |
| d1to2e_ | 281 | c.41.1.1 (E:) Subtilisin {Bacillus amyloliquefacie | 1e-14 | |
| d2ixta1 | 309 | c.41.1.1 (A:1-309) Sphericase {Bacillus sphaericus | 5e-14 | |
| d1wmda2 | 318 | c.41.1.1 (A:1-318) Alkaline serine protease kp-43, | 3e-13 | |
| d1p8ja2 | 334 | c.41.1.1 (A:109-442) Furin, N-terminal domain {Mou | 4e-11 | |
| d1dbia_ | 280 | c.41.1.1 (A:) Thermostable serine protease {Bacill | 4e-10 | |
| d2id4a2 | 339 | c.41.1.1 (A:122-460) Kexin, N-terminal domain {Bak | 1e-09 | |
| d2pwaa1 | 279 | c.41.1.1 (A:1-279) Proteinase K {Fungus (Tritirach | 2e-08 | |
| d1thma_ | 279 | c.41.1.1 (A:) Thermitase {Thermoactinomyces vulgar | 5e-08 | |
| d1ga6a_ | 369 | c.41.1.2 (A:) Serine-carboxyl proteinase, SCP {Pse | 0.004 |
| >d1v6ca_ c.41.1.1 (A:) Alkaline serine protease Apa1 {Pseudoalteromonas sp. AS-11 [TaxId: 247492]} Length = 435 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Subtilisin-like superfamily: Subtilisin-like family: Subtilases domain: Alkaline serine protease Apa1 species: Pseudoalteromonas sp. AS-11 [TaxId: 247492]
Score = 112 bits (281), Expect = 1e-28
Identities = 43/166 (25%), Positives = 72/166 (43%), Gaps = 21/166 (12%)
Query: 35 GSDTKNPQAEILKTSVIKDSDA-PIVASFSSRGPNKYVPDIL--KPDISAPGVNILAAY- 90
+ + EI T K + A I+ +S P P ++ DI+ P V++ A
Sbjct: 282 VGNQGSSYPEINSTKACKTAGAKGIIVYSNSALPGLQNPFLVDANSDITVPSVSVDRATG 341
Query: 91 ---SPLAPVSRDIEDERHVKYNIISGTSMACPHAAGVAAYVKSFHPDWSPSAIKSAIMTT 147
S + ++ + Y +GTSMA PH +GVA V S+HP+ S S +++A+ T
Sbjct: 342 LALKAKLGQSTTVSNQGNQDYEYYNGTSMATPHVSGVATLVWSYHPECSASQVRAALNAT 401
Query: 148 AWPMNSSKNTQAEFAYGSGHINPVKAINPGLVYGAFKQDYINMLCS 193
A ++ + + G G IN V A Y++ C+
Sbjct: 402 ADDLSVAGR---DNQTGYGMINAVAAK-----------AYLDESCT 433
|
| >d1r6va_ c.41.1.1 (A:) Fervidolysin {Fervidobacterium pennivorans [TaxId: 93466]} Length = 671 | Back information, alignment and structure |
|---|
| >d1r0re_ c.41.1.1 (E:) Subtilisin {Bacillus subtilis, carlsberg [TaxId: 1423]} Length = 274 | Back information, alignment and structure |
|---|
| >d1gcia_ c.41.1.1 (A:) Subtilisin {Bacillus lentus [TaxId: 1467]} Length = 269 | Back information, alignment and structure |
|---|
| >d1to2e_ c.41.1.1 (E:) Subtilisin {Bacillus amyloliquefaciens, Novo/BPN' [TaxId: 1390]} Length = 281 | Back information, alignment and structure |
|---|
| >d2ixta1 c.41.1.1 (A:1-309) Sphericase {Bacillus sphaericus [TaxId: 1421]} Length = 309 | Back information, alignment and structure |
|---|
| >d1wmda2 c.41.1.1 (A:1-318) Alkaline serine protease kp-43, N-terminal domain {Bacillus sp. KSM-KP43 [TaxId: 109322]} Length = 318 | Back information, alignment and structure |
|---|
| >d1p8ja2 c.41.1.1 (A:109-442) Furin, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} Length = 334 | Back information, alignment and structure |
|---|
| >d1dbia_ c.41.1.1 (A:) Thermostable serine protease {Bacillus sp., AK.1 [TaxId: 1409]} Length = 280 | Back information, alignment and structure |
|---|
| >d2id4a2 c.41.1.1 (A:122-460) Kexin, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 339 | Back information, alignment and structure |
|---|
| >d2pwaa1 c.41.1.1 (A:1-279) Proteinase K {Fungus (Tritirachium album), strain limber [TaxId: 37998]} Length = 279 | Back information, alignment and structure |
|---|
| >d1thma_ c.41.1.1 (A:) Thermitase {Thermoactinomyces vulgaris [TaxId: 2026]} Length = 279 | Back information, alignment and structure |
|---|
| >d1ga6a_ c.41.1.2 (A:) Serine-carboxyl proteinase, SCP {Pseudomonas sp., sedolisin [TaxId: 306]} Length = 369 | Back information, alignment and structure |
|---|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 333 | |||
| d1r6va_ | 671 | Fervidolysin {Fervidobacterium pennivorans [TaxId: | 99.82 | |
| d1r0re_ | 274 | Subtilisin {Bacillus subtilis, carlsberg [TaxId: 1 | 99.82 | |
| d1to2e_ | 281 | Subtilisin {Bacillus amyloliquefaciens, Novo/BPN' | 99.8 | |
| d1gcia_ | 269 | Subtilisin {Bacillus lentus [TaxId: 1467]} | 99.8 | |
| d1v6ca_ | 435 | Alkaline serine protease Apa1 {Pseudoalteromonas s | 99.78 | |
| d1thma_ | 279 | Thermitase {Thermoactinomyces vulgaris [TaxId: 202 | 99.78 | |
| d1dbia_ | 280 | Thermostable serine protease {Bacillus sp., AK.1 [ | 99.75 | |
| d2ixta1 | 309 | Sphericase {Bacillus sphaericus [TaxId: 1421]} | 99.72 | |
| d1wmda2 | 318 | Alkaline serine protease kp-43, N-terminal domain | 99.71 | |
| d2pwaa1 | 279 | Proteinase K {Fungus (Tritirachium album), strain | 99.67 | |
| d2id4a2 | 339 | Kexin, N-terminal domain {Baker's yeast (Saccharom | 99.63 | |
| d1p8ja2 | 334 | Furin, N-terminal domain {Mouse (Mus musculus) [Ta | 99.57 | |
| d1t1ga_ | 357 | Serine-carboxyl proteinase, SCP {Bacillus novosp. | 99.2 | |
| d1ga6a_ | 369 | Serine-carboxyl proteinase, SCP {Pseudomonas sp., | 98.97 | |
| d1w8oa1 | 103 | Sialidase, "linker" domain {Micromonospora viridif | 97.11 |
| >d1r6va_ c.41.1.1 (A:) Fervidolysin {Fervidobacterium pennivorans [TaxId: 93466]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Subtilisin-like superfamily: Subtilisin-like family: Subtilases domain: Fervidolysin species: Fervidobacterium pennivorans [TaxId: 93466]
Probab=99.82 E-value=6.2e-21 Score=196.32 Aligned_cols=113 Identities=29% Similarity=0.394 Sum_probs=93.7
Q ss_pred CeeecccCCCCCCCCCCCcCCcEEeCCCceeeccCCCCCCCc-----CcccccceeeEEeCCccchHHHHHHHHHHHHhh
Q 044126 57 PIVASFSSRGPNKYVPDILKPDISAPGVNILAAYSPLAPVSR-----DIEDERHVKYNIISGTSMACPHAAGVAAYVKSF 131 (333)
Q Consensus 57 ~~va~fSs~Gp~~~~~~~lKPDI~APG~~I~sa~~~~~~~~~-----~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~~~ 131 (333)
..+++||+|||.+ ||+|||++|+++++....... .......+.|..++|||||||||||++|||+|+
T Consensus 326 ~~~a~fS~~g~~~--------dv~APG~~i~st~~~~~~~~~~~~~~~~~~~~~~~y~~~sGTS~AaP~VaG~aALl~~~ 397 (671)
T d1r6va_ 326 FRVAGFSSRSDGV--------SVGAPGVTILSTVPGEDSIGYEGHNENVPATNGGTYDYYQGTSMAAPHVTGVVAVLLQK 397 (671)
T ss_dssp EEECSSSCCCTTE--------EEEEECSSEEEECCCTTSTTCCCCCTTCCCSSSCCEEEEESHHHHHHHHHHHHHHHHHH
T ss_pred ceeeeccCCCCCc--------eEEecCCCeEeecCCCCccccccccccccccCCCeeeeecCHHHHHHHHHHHHHHHHHH
Confidence 4789999999986 999999999999875432111 111123468999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHhcCCCCCCCCCCCCccccCCCCcCccccCCCCccc
Q 044126 132 HPDWSPSAIKSAIMTTAWPMNSSKNTQAEFAYGSGHINPVKAINPGLVY 180 (333)
Q Consensus 132 ~p~~sp~~ik~~L~~tA~~~~~~~~~~~~~~~G~G~id~~~A~~~~lv~ 180 (333)
+|+|++.|||++|++||+++... ..+..||||+||+.+|++..+..
T Consensus 398 ~p~lt~~~v~~~L~~tA~~~~~~---g~~~~~G~G~vna~~Av~~~~~~ 443 (671)
T d1r6va_ 398 FPNAKPWQIRKLLENTAFDFNGN---GWDHDTGYGLVKLDAALQGPLPT 443 (671)
T ss_dssp CTTCCHHHHHHHHHHHCBCSSSS---SCBTTTBTCBCCHHHHHHCCCCS
T ss_pred CCCCCHHHHHHHHHhhCccCCCC---CCCCCcccChhCHHHHhhCcCCC
Confidence 99999999999999999987653 56789999999999999865543
|
| >d1r0re_ c.41.1.1 (E:) Subtilisin {Bacillus subtilis, carlsberg [TaxId: 1423]} | Back information, alignment and structure |
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| >d1to2e_ c.41.1.1 (E:) Subtilisin {Bacillus amyloliquefaciens, Novo/BPN' [TaxId: 1390]} | Back information, alignment and structure |
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| >d1gcia_ c.41.1.1 (A:) Subtilisin {Bacillus lentus [TaxId: 1467]} | Back information, alignment and structure |
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| >d1v6ca_ c.41.1.1 (A:) Alkaline serine protease Apa1 {Pseudoalteromonas sp. AS-11 [TaxId: 247492]} | Back information, alignment and structure |
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| >d1thma_ c.41.1.1 (A:) Thermitase {Thermoactinomyces vulgaris [TaxId: 2026]} | Back information, alignment and structure |
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| >d1dbia_ c.41.1.1 (A:) Thermostable serine protease {Bacillus sp., AK.1 [TaxId: 1409]} | Back information, alignment and structure |
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| >d2ixta1 c.41.1.1 (A:1-309) Sphericase {Bacillus sphaericus [TaxId: 1421]} | Back information, alignment and structure |
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| >d1wmda2 c.41.1.1 (A:1-318) Alkaline serine protease kp-43, N-terminal domain {Bacillus sp. KSM-KP43 [TaxId: 109322]} | Back information, alignment and structure |
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| >d2pwaa1 c.41.1.1 (A:1-279) Proteinase K {Fungus (Tritirachium album), strain limber [TaxId: 37998]} | Back information, alignment and structure |
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| >d2id4a2 c.41.1.1 (A:122-460) Kexin, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
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| >d1p8ja2 c.41.1.1 (A:109-442) Furin, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
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| >d1t1ga_ c.41.1.2 (A:) Serine-carboxyl proteinase, SCP {Bacillus novosp. MN-32, kumamolisin [TaxId: 198803]} | Back information, alignment and structure |
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| >d1ga6a_ c.41.1.2 (A:) Serine-carboxyl proteinase, SCP {Pseudomonas sp., sedolisin [TaxId: 306]} | Back information, alignment and structure |
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| >d1w8oa1 b.1.18.2 (A:403-505) Sialidase, "linker" domain {Micromonospora viridifaciens [TaxId: 1881]} | Back information, alignment and structure |
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