Citrus Sinensis ID: 044156

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------29
Protein Sequence
ALLLNQGSPKTADIPWVALIGQSVSIATTQSGSEISLETAWTAESESLKSILIGAPQSQLGRIALADDLAQLIRKRMKVRVPNLLSGLQGKSQIVQDELVRLGEQMVQSVEGTRSLSLELCREFEDKFLQLITTGEGSGWKIVASFEGNFPNRIKQLPLDRRFDINNVQRIVLEADGYQPYLISPEKGLRSLIKGVLELAKEPSRLSVDEVIEPLKHVHRVLVGMVSAAANATPGLGRYPLFKREVVAIASAALDGFKNEARKMVVALVDMERAFVPPQHFIRLVQRG
Secondary Structure (PSIPRED)
cccccccccccccccEEEEEccccHHHHHcccccccHHHHHHHHHHHccccccccccccccHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHccccHHHHHcccccccccHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHcc
Secondary Structure Prediction (SSPRO)
cccHHccccccccccEEEEEcccHHHHHHHccccccHHHHHHHHHHHHccHHHHHHHHHccHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHcHHHHccccccHHccHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHcccHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHccccHHHcccccc
Coil and Loop (DISEMBL)
alllnqgspktadipwvALIGQSVSiattqsgseisLETAWTAESESLKSILIGAPQSQLGRIALADDLAQLIRKRMKVrvpnllsglqgksQIVQDELVRLGEQMVQSVEGTRSLSLELCREFEDKFLQLITTGEGSGWKIVASFEgnfpnrikqlpldrrfdinnVQRIVLEadgyqpylispeKGLRSLIKGVLELakepsrlsvdeviePLKHVHRVLVGMVSAaanatpglgryplfKREVVAIASAALDGFKNEARKMVVALVDMerafvppqhfiRLVQRG
Flexible Loop (DISEMBL)
alllnqgspktadipWVALIGQSVSIATTQSGSEISLETAWTAESESLKSILIGAPQSQLGRIALADDLAQLIRKRMKVrvpnllsglqgksqIVQDELVRLGEQMVQSVEGTRSLSLELCREFEDKFLQLITTGEGSGWKIVASFEGNFPNRIKQLPLDRRFDINNVQRIVLEADGYQPYLISPEKGLRSLIKGVLElakepsrlsvDEVIEPLKHVHRVLVGMVSAAANATPGLGRYPLFKREVVAIASAALDGFKNEARKMVVALVDMErafvppqhfirlvqrg
Low Complexity Region (SEG)
ALLLNQGSPKTADIPWVALIGQSVSIATTQSGSEISLETAWTAESESLKSILIGAPQSQLGRIALADDLAQLIRKRMKVRVPNLLSGLQGKSQIVQDELVRLGEQMVQSVEGTRSLSLELCREFEDKFLQLITTGEGSGWKIVASFEGNFPNRIKQLPLDRRFDINNVQRIVLEADGYQPYLISPEKGLRSLIKGVLELAKEPSRLSVDEVIEPLKHVHRVLVGMVSAAANATPGLGRYPLFKREVVAIASAALDGFKNEARKMVVALVDMERAFVPPQHFIRLVQRG
Disordered region (IsUnstruct)
************DIPWVALIGQSVSIATTQ***EISLETAWTAESESLKSILIGAPQSQLGRIALADDLAQLIRKRMKVRVPNLLSGLQGKSQIVQDELVRLGEQMVQSVEGTRSLSLELCREFEDKFLQLITTGEGSGWKIVASFEGNFPNRIKQLPLDRRFDINNVQRIVLEADGYQPYLISPEKGLRSLIKGVLELAKEPSRLSVDEVIEPLKHVHRVLVGMVSAAANATPGLGRYPLFKREVVAIASAALDGFKNEARKMVVALVDMERAFVPPQHFIRLV***
Disordered Region (DISOPRED)
ALLLNQGSPKTADIPWVALIG*****************TAWTAESESLKSILIGAPQSQLGRIALADDLAQLIRKRMKVRVPNLLSGLQGKSQIVQDELV***********GTRSLSLELCREFEDKFLQLITTGEGSGWKIVASFEGNFPNRIKQLPLDRRFDINNVQRIVLEADGYQPYLISPEKGLRSLIKGVLELAKEPSRLSVDEVIEPLKHVHRVLVGMVSAAANATPGLGRYPLFKREVVAIASAALDGFKNEARKMVVALVDMERAFVPPQHFIRLVQ**
Disordered Region (DISEMBL)
ALLLNQGSPKTADIPWVALIGQSVSIATTQSGSEISLETAWTAESESLKSILIGAPQSQLGRIALADDLAQLIRKRMKVRVPNLLSGLQGKSQIVQDELVRLGEQMVQSVEGTRSLSLELCREFEDKFLQLITTGEGSGWKIVASFEGNFPNRIKQLPLDRRFDINNVQRIVLEADGYQPYLISPEKGLRSLIKGVLELAKEPSRLSVDEVIEPLKHVHRVLVGMVSAAANATPGLGRYPLFKREVVAIASAALDGFKNEARKMVVALVDMERAFVPPQHFIRLVQRG
Disordered Region (DISPRO)
*LLLNQGSPKTADIPWVALIGQSVSIATTQSGSEISLETAWTAESESLKSILIGAPQSQLGRIALADDLAQLIRKRMKVRVPNLLSGLQGKSQIVQDELVRLGEQMVQSVEGTRSLSLELCREFEDKFLQLITTGEGSGWKIVASFEGNFPNRIKQLPLDRRFDINNVQRIVLEADGYQPYLISPEKGLRSLIKGVLELAKEPSRLSVDEVIEPLKHVHRVLVGMVSAAANATPGLGRYPLFKREVVAIASAALDGFKNEARKMVVALVDMERAFVPPQHFIRLV***
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
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Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
ALLLNQGSPKTADIPWVALIGQSVSIATTQSGSEISLETAWTAESESLKSILIGAPQSQLGRIALADDLAQLIRKRMKVRVPNLLSGLQGKSQIVQDELVRLGEQMVQSVEGTRSLSLELCREFEDKFLQLITTGEGSGWKIVASFEGNFPNRIKQLPLDRRFDINNVQRIVLEADGYQPYLISPEKGLRSLIKGVLELAKEPSRLSVDEVIEPLKHVHRVLVGMVSAAANATPGLGRYPLFKREVVAIASAALDGFKNEARKMVVALVDMERAFVPPQHFIRLVQRG
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	288	2.2.26 [Sep-21-2011]
Q9LQ55	920	Dynamin-2B OS=Arabidopsis	yes	no	0.965	0.302	0.818	1e-132
Q9SE83	914	Dynamin-2A OS=Arabidopsis	no	no	0.965	0.304	0.814	1e-132
Q9FNX5	624	Dynamin-related protein 1	no	no	0.906	0.418	0.322	7e-34
Q8S3C9	612	Dynamin-related protein 1	no	no	0.947	0.446	0.319	1e-32
Q8LF21	614	Dynamin-related protein 1	no	no	0.899	0.421	0.317	1e-32
Q84XF3	610	Dynamin-related protein 1	no	no	0.892	0.421	0.288	8e-30
P42697	610	Dynamin-related protein 1	no	no	0.906	0.427	0.282	1e-26
Q39828	610	Dynamin-related protein 5	no	no	0.895	0.422	0.276	2e-25
Q39821	610	Dynamin-related protein 1	no	no	0.895	0.422	0.273	4e-25
P54861	757	Dynamin-related protein D	yes	no	0.739	0.281	0.245	6e-09

>sp|Q9LQ55|DRP2B_ARATH Dynamin-2B OS=Arabidopsis thaliana GN=DRP2B PE=1 SV=2

 Score =  471 bits (1212), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 234/286 (81%), Positives = 254/286 (88%), Gaps = 8/286 (2%)

Query: 1   ALLLNQGSPKTADIPWVALIGQSVSIATTQSG-SEISLETAWTAESESLKSILIGAPQSQ 59
           ALL NQG PKT DIPWVALIGQSVSIA+ QSG SE SLETAW AESESLKSIL GAPQS+
Sbjct: 221 ALLSNQGPPKTTDIPWVALIGQSVSIASAQSGGSENSLETAWRAESESLKSILTGAPQSK 280

Query: 60  LGRIALADDLAQLIRKRMKVRVPNLLSGLQGKSQIVQDELVRLGEQMVQSVEGTRSLSLE 119
           LGRIAL D LA  IR RMK+R+PN+L+GLQGKSQIVQDEL RLGEQ+V S EGTR+++LE
Sbjct: 281 LGRIALVDTLASQIRSRMKLRLPNILTGLQGKSQIVQDELARLGEQLVSSAEGTRAIALE 340

Query: 120 LCREFEDKFLQLITTGEGSGWKIVASFEGNFPNRIKQLPLDRRFDINNVQRIVLEADGYQ 179
           LCREFEDKFL  +  GEGSGWK+VASFEGNFPNRIK+LPLDR FD+NNV+RIVLEADGYQ
Sbjct: 341 LCREFEDKFLLHLAGGEGSGWKVVASFEGNFPNRIKKLPLDRHFDLNNVKRIVLEADGYQ 400

Query: 180 PYLISPEKGLRSLIKGVLELAKEPSRLSVDEVIEPLKHVHRVLVGMVSAAANATPGLGRY 239
           PYLISPEKGLRSLIK VLELAK+P+RL VDE       VHRVLV +VSA+ANATPGLGRY
Sbjct: 401 PYLISPEKGLRSLIKTVLELAKDPARLCVDE-------VHRVLVDIVSASANATPGLGRY 453

Query: 240 PLFKREVVAIASAALDGFKNEARKMVVALVDMERAFVPPQHFIRLV 285
           P FKREVVAIASAALDGFKNEA+KMVVALVDMERAFVPPQHFIRLV
Sbjct: 454 PPFKREVVAIASAALDGFKNEAKKMVVALVDMERAFVPPQHFIRLV 499

Putative microtubule-associated force-producing protein, able to bind and hydrolyze GTP.
Arabidopsis thaliana (taxid: 3702)
EC: 3EC: .EC: 6EC: .EC: 5EC: .EC: 5

>sp|Q9SE83|DRP2A_ARATH Dynamin-2A OS=Arabidopsis thaliana GN=DRP2A PE=1 SV=2

 Score =  469 bits (1207), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 233/286 (81%), Positives = 254/286 (88%), Gaps = 8/286 (2%)

Query: 1   ALLLNQGSPKTADIPWVALIGQSVSIATTQSGS-EISLETAWTAESESLKSILIGAPQSQ 59
           ALL NQG PKT DIPWVA+IGQSVSIA+ QSGS E SLETAW AESESLKSIL GAPQS+
Sbjct: 221 ALLSNQGPPKTTDIPWVAVIGQSVSIASAQSGSGENSLETAWRAESESLKSILTGAPQSK 280

Query: 60  LGRIALADDLAQLIRKRMKVRVPNLLSGLQGKSQIVQDELVRLGEQMVQSVEGTRSLSLE 119
           LGRIAL D LA  IR RMK+R+P++LSGLQGKSQIVQDEL RLGEQ+V S EGTR+++LE
Sbjct: 281 LGRIALVDTLASQIRSRMKLRLPSVLSGLQGKSQIVQDELARLGEQLVNSAEGTRAIALE 340

Query: 120 LCREFEDKFLQLITTGEGSGWKIVASFEGNFPNRIKQLPLDRRFDINNVQRIVLEADGYQ 179
           LCREFEDKFL  +  GEGSGWK+VASFEGNFPNRIKQLPLDR FD+NNV+R+VLEADGYQ
Sbjct: 341 LCREFEDKFLLHLAGGEGSGWKVVASFEGNFPNRIKQLPLDRHFDLNNVKRVVLEADGYQ 400

Query: 180 PYLISPEKGLRSLIKGVLELAKEPSRLSVDEVIEPLKHVHRVLVGMVSAAANATPGLGRY 239
           PYLISPEKGLRSLIK VLELAK+P+RL VDE       VHRVLV +VSA+ANATPGLGRY
Sbjct: 401 PYLISPEKGLRSLIKIVLELAKDPARLCVDE-------VHRVLVDIVSASANATPGLGRY 453

Query: 240 PLFKREVVAIASAALDGFKNEARKMVVALVDMERAFVPPQHFIRLV 285
           P FKREVVAIASAALDGFKNEA+KMVVALVDMERAFVPPQHFIRLV
Sbjct: 454 PPFKREVVAIASAALDGFKNEAKKMVVALVDMERAFVPPQHFIRLV 499

Microtubule-associated force-producing protein involved in clathrin-mediated vesicle trafficking from the trans-Golgi network to the central vacuole. Able to bind and hydrolyze GTP. Binds specifically to phosphatidylinositol 3-phosphate (PtdIns3P).

Arabidopsis thaliana (taxid: 3702)

EC: 3

EC: .

EC: 6

EC: .

EC: 5

EC: .

EC: 5

>sp|Q9FNX5|DRP1E_ARATH Dynamin-related protein 1E OS=Arabidopsis thaliana GN=DRP1E PE=1 SV=1

 Score =  144 bits (363), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 88/273 (32%), Positives = 145/273 (53%), Gaps = 12/273 (4%)

Query: 15  PWVALIGQSVSIATTQSGSEISLETAWTAESESLK-SILIGAPQSQLGRIALADDLAQLI 73
           PWV ++ +S           + +  A   E E    S   G   S++G   LA  L++ +
Sbjct: 242 PWVGIVNRS----QADINKNVDMMLARRKEREYFDTSPDYGHLASKMGSEYLAKLLSKHL 297

Query: 74  RKRMKVRVPNLLSGLQGKSQIVQDELVRLGEQMVQSVEGTRSLSLELCREFEDKFLQLIT 133
              ++ R+P++LS +    + ++ EL R+G  +           LE+CR F+  F + + 
Sbjct: 298 ESVIRTRIPSILSLINKSIEELERELDRMGRPVAVDAGAQLYTILEMCRAFDKIFKEHLD 357

Query: 134 TGEGSGWKIVASFEGNFPNRIKQLPLDRRFDINNVQRIVLEADGYQPYLISPEKGLRSLI 193
            G   G +I   F+   P  +K+LP DR   + +V++IV EADGYQP+LI+PE+G R LI
Sbjct: 358 GGRPGGDRIYGVFDNQLPAALKKLPFDRHLSLQSVKKIVSEADGYQPHLIAPEQGYRRLI 417

Query: 194 KGVLELAKEPSRLSVDEVIEPLKHVHRVLVGMVSAAANATPGLGRYPLFKREVVAIASAA 253
           +G L   + P+  SVD        VH VL  +V  + + T  L R+P  + E+ A A+++
Sbjct: 418 EGALGYFRGPAEASVDA-------VHYVLKELVRKSISETEELKRFPSLQVELAAAANSS 470

Query: 254 LDGFKNEARKMVVALVDMERAFVPPQHFIRLVQ 286
           L+ F+ E++K V+ LVDME A++  + F +L Q
Sbjct: 471 LEKFREESKKSVIRLVDMESAYLTAEFFRKLPQ 503

Microtubule-associated force-producing protein that is targeted to the tubulo-vesicular network of the forming cell plate during cytokinesis. Plays also a major role in plasma membrane maintenance and cell wall integrity with an implication in vesicular trafficking, polar cell expansion, and other aspects of plant growth and development.

Arabidopsis thaliana (taxid: 3702)

>sp|Q8S3C9|DRP1D_ARATH Dynamin-related protein 1D OS=Arabidopsis thaliana GN=DRP1D PE=2 SV=2

 Score =  140 bits (353), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 91/285 (31%), Positives = 147/285 (51%), Gaps = 12/285 (4%)

Query: 1   ALLLNQGSPKTADIPWVALIGQSVSIATTQSGSEISLETAWTAESESLK-SILIGAPQSQ 59
           AL +  G       PWV ++ +S           + +  A   E E  + S   G   ++
Sbjct: 223 ALDVINGRSYKLKYPWVGIVNRS----QADINKNVDMMVARRKEREYFETSPDYGHLATR 278

Query: 60  LGRIALADDLAQLIRKRMKVRVPNLLSGLQGKSQIVQDELVRLGEQMVQSVEGTRSLSLE 119
           +G   LA  L++L+   ++ R+P++LS +    + ++ EL +LG  +           L 
Sbjct: 279 MGSEYLAKLLSKLLESVIRSRIPSILSLINNNIEELERELDQLGRPIAIDAGAQLYTILG 338

Query: 120 LCREFEDKFLQLITTGEGSGWKIVASFEGNFPNRIKQLPLDRRFDINNVQRIVLEADGYQ 179
           +CR FE  F + +  G   G +I   F+ N P  IK+LP DR   + +V+RIV E+DGYQ
Sbjct: 339 MCRAFEKIFKEHLDGGRPGGARIYGIFDYNLPTAIKKLPFDRHLSLQSVKRIVSESDGYQ 398

Query: 180 PYLISPEKGLRSLIKGVLELAKEPSRLSVDEVIEPLKHVHRVLVGMVSAAANATPGLGRY 239
           P+LI+PE G R LI+G L   + P+  SV+        +H +L  +V  A   T  L R+
Sbjct: 399 PHLIAPELGYRRLIEGSLNHFRGPAEASVNA-------IHLILKELVRKAIAETEELKRF 451

Query: 240 PLFKREVVAIASAALDGFKNEARKMVVALVDMERAFVPPQHFIRL 284
           P  + E+VA A+++LD F+ E+ K V+ LVDME +++    F +L
Sbjct: 452 PSLQIELVAAANSSLDKFREESMKSVLRLVDMESSYLTVDFFRKL 496

Putative microtubule-associated force-producing protein.

Arabidopsis thaliana (taxid: 3702)

>sp|Q8LF21|DRP1C_ARATH Dynamin-related protein 1C OS=Arabidopsis thaliana GN=DRP1C PE=1 SV=2

 Score =  140 bits (352), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 86/271 (31%), Positives = 140/271 (51%), Gaps = 12/271 (4%)

Query: 15  PWVALIGQSVSIATTQSGSEISLETAWTAESESLK-SILIGAPQSQLGRIALADDLAQLI 73
           PWV ++ +S           + +  A   E E  + S   G   S++G   LA  L+Q +
Sbjct: 237 PWVGIVNRS----QADINKRVDMIAARRKEQEYFETSPEYGHLASRMGSEYLAKLLSQHL 292

Query: 74  RKRMKVRVPNLLSGLQGKSQIVQDELVRLGEQMVQSVEGTRSLSLELCREFEDKFLQLIT 133
              ++ ++P++++ +      +  EL R+G  +           LELCR F+  F + + 
Sbjct: 293 ETVIRQKIPSIVALINKSIDEINAELDRIGRPIAVDSGAQLYTILELCRAFDRVFKEHLD 352

Query: 134 TGEGSGWKIVASFEGNFPNRIKQLPLDRRFDINNVQRIVLEADGYQPYLISPEKGLRSLI 193
            G   G +I   F+   P  +K+LP DR     NVQ++V EADGYQP+LI+PE+G R LI
Sbjct: 353 GGRPGGDRIYGVFDHQLPAALKKLPFDRHLSTKNVQKVVSEADGYQPHLIAPEQGYRRLI 412

Query: 194 KGVLELAKEPSRLSVDEVIEPLKHVHRVLVGMVSAAANATPGLGRYPLFKREVVAIASAA 253
            G +   K P+  +VD        VH VL  +V  + + T  L R+P    ++ A A+ A
Sbjct: 413 DGSISYFKGPAEATVDA-------VHFVLKELVRKSISETEELKRFPTLASDIAAAANEA 465

Query: 254 LDGFKNEARKMVVALVDMERAFVPPQHFIRL 284
           L+ F++E+RK V+ LVDME +++  + F +L
Sbjct: 466 LERFRDESRKTVLRLVDMESSYLTVEFFRKL 496

Microtubule-associated force-producing protein that is targeted to the growing edges of the cell plate during cytokinesis. Plays also a major role in plasma membrane maintenance during pollen maturation.

Arabidopsis thaliana (taxid: 3702)

>sp|Q84XF3|DRP1B_ARATH Dynamin-related protein 1B OS=Arabidopsis thaliana GN=DRP1B PE=2 SV=1

 Score =  130 bits (328), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 80/277 (28%), Positives = 139/277 (50%), Gaps = 20/277 (7%)

Query: 15  PWVALIGQSVSIATTQSGSEISLETAWTAESESLKSILIGAPQ-----SQLGRIALADDL 69
           PWV ++         +S ++I+      A     +     +P+      ++G   L   L
Sbjct: 236 PWVGVV--------NRSQADINKSVDMIAARRRERDYFQTSPEYRHLTERMGSEYLGKML 287

Query: 70  AQLIRKRMKVRVPNLLSGLQGKSQIVQDELVRLGEQMVQSVEGTRSLSLELCREFEDKFL 129
           ++ +   +K R+P L S +      ++ EL RLG+ +     G   + +E+CR F+  F 
Sbjct: 288 SKHLEVVIKSRIPGLQSLITKTISELETELSRLGKPVAADAGGKLYMIMEICRAFDQTFK 347

Query: 130 QLITTGEGSGWKIVASFEGNFPNRIKQLPLDRRFDINNVQRIVLEADGYQPYLISPEKGL 189
           + +      G KI + F+  FP  IK+L  D+   ++NV++++ EADGYQP+LI+PE+G 
Sbjct: 348 EHLDGTRSGGEKINSVFDNQFPAAIKRLQFDKHLSMDNVRKLITEADGYQPHLIAPEQGY 407

Query: 190 RSLIKGVLELAKEPSRLSVDEVIEPLKHVHRVLVGMVSAAANATPGLGRYPLFKREVVAI 249
           R LI+  L   + P+  +VD        VH +L  ++  +   T  L +YP  + EV   
Sbjct: 408 RRLIESCLVSIRGPAEAAVDA-------VHSILKDLIHKSMGETSELKQYPTLRVEVSGA 460

Query: 250 ASAALDGFKNEARKMVVALVDMERAFVPPQHFIRLVQ 286
           A  +LD  ++E+RK  + LVDME  ++  + F +L Q
Sbjct: 461 AVDSLDRMRDESRKATLLLVDMESGYLTVEFFRKLPQ 497

Putative microtubule-associated force-producing protein.

Arabidopsis thaliana (taxid: 3702)

>sp|P42697|DRP1A_ARATH Dynamin-related protein 1A OS=Arabidopsis thaliana GN=DRP1A PE=1 SV=3

 Score =  120 bits (301), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 77/273 (28%), Positives = 136/273 (49%), Gaps = 12/273 (4%)

Query: 15  PWVALIGQSVSIATTQSGSEISLETAWTAESESLKSIL-IGAPQSQLGRIALADDLAQLI 73
           PWV ++ +S           + +  A   E E   +        +++G   LA  L++ +
Sbjct: 236 PWVGVVNRS----QADINKNVDMIAARKREREYFSNTTEYRHLANKMGSEHLAKMLSKHL 291

Query: 74  RKRMKVRVPNLLSGLQGKSQIVQDELVRLGEQMVQSVEGTRSLSLELCREFEDKFLQLIT 133
            + +K R+P + S +      ++ EL RLG+ +     G     +E+CR F+  F + + 
Sbjct: 292 ERVIKSRIPGIQSLINKTVLELETELSRLGKPIAADAGGKLYSIMEICRLFDQIFKEHLD 351

Query: 134 TGEGSGWKIVASFEGNFPNRIKQLPLDRRFDINNVQRIVLEADGYQPYLISPEKGLRSLI 193
                G K+   F+   P  +K+L  D++  ++N++++V EADGYQP+LI+PE+G R LI
Sbjct: 352 GVRAGGEKVYNVFDNQLPAALKRLQFDKQLAMDNIRKLVTEADGYQPHLIAPEQGYRRLI 411

Query: 194 KGVLELAKEPSRLSVDEVIEPLKHVHRVLVGMVSAAANATPGLGRYPLFKREVVAIASAA 253
           +  +   + P+  SVD        VH +L  +V  + N T  L +YP  + EV   A  +
Sbjct: 412 ESSIVSIRGPAEASVDT-------VHAILKDLVHKSVNETVELKQYPALRVEVTNAAIES 464

Query: 254 LDGFKNEARKMVVALVDMERAFVPPQHFIRLVQ 286
           LD  +  ++K  + LVDME +++    F +L Q
Sbjct: 465 LDKMREGSKKATLQLVDMECSYLTVDFFRKLPQ 497

Microtubule-associated force-producing protein that is targeted to the forming cell plate during cytokinesis. Plays also a major role in plasma membrane maintenance and cell wall integrity with implications in vesicular trafficking, polar cell expansion, vascular formation, and other aspects of plant growth and development. Has a GTPase activity.

Arabidopsis thaliana (taxid: 3702)

>sp|Q39828|SDL5A_SOYBN Dynamin-related protein 5A OS=Glycine max PE=2 SV=1

 Score =  116 bits (291), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 77/278 (27%), Positives = 137/278 (49%), Gaps = 20/278 (7%)

Query: 14  IPWVALIGQSVSIATTQSGSEISLETAWTAESESLKSILIGAPQ-----SQLGRIALADD 68
            PW+ ++ +S           + +  A   E E   S     P+     +++G   LA  
Sbjct: 235 FPWIGVVNRS----QQDINKNVDMIAARRREREYFNS----TPEYKHLANRMGSEHLAKM 286

Query: 69  LAQLIRKRMKVRVPNLLSGLQGKSQIVQDELVRLGEQMVQSVEGTRSLSLELCREFEDKF 128
           L++ +   +K ++P + S +      ++ EL RLG+ +     G     +E+CR F+  F
Sbjct: 287 LSKHLETVIKSKIPGIQSLINKTIAELEAELTRLGKPVAADAGGKLYAIMEICRSFDQIF 346

Query: 129 LQLITTGEGSGWKIVASFEGNFPNRIKQLPLDRRFDINNVQRIVLEADGYQPYLISPEKG 188
              +      G KI   F+   P  +K+L  D++  + N+++++ EADGYQP+LI+PE+G
Sbjct: 347 KDHLDGVRPGGDKIYNVFDNQLPAALKRLQFDKQLSMENIRKLITEADGYQPHLIAPEQG 406

Query: 189 LRSLIKGVLELAKEPSRLSVDEVIEPLKHVHRVLVGMVSAAANATPGLGRYPLFKREVVA 248
            R LI+  L   + P+  +VD        VH +L  +V  A + T  L +YP  + EV A
Sbjct: 407 YRRLIESSLITIRGPAEAAVDA-------VHSLLKDLVHKAISETLDLKQYPGLRVEVGA 459

Query: 249 IASAALDGFKNEARKMVVALVDMERAFVPPQHFIRLVQ 286
            A  +L+  ++E+++  + LVDME  ++    F +L Q
Sbjct: 460 AAVDSLERMRDESKRATLQLVDMECGYLTVDFFRKLPQ 497

Microtubule-associated force-producing protein.

Glycine max (taxid: 3847)

>sp|Q39821|SDLCA_SOYBN Dynamin-related protein 12A OS=Glycine max PE=1 SV=1

 Score =  115 bits (287), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 76/278 (27%), Positives = 137/278 (49%), Gaps = 20/278 (7%)

Query: 14  IPWVALIGQSVSIATTQSGSEISLETAWTAESESLKSILIGAPQ-----SQLGRIALADD 68
            PW+ ++ +S           + +  A   E E   S     P+     +++G   LA  
Sbjct: 235 FPWIGVVNRS----QQDINKNVDMIAARRREREYFNS----TPEYKHLANRMGSEHLAKM 286

Query: 69  LAQLIRKRMKVRVPNLLSGLQGKSQIVQDELVRLGEQMVQSVEGTRSLSLELCREFEDKF 128
           L++ +   +K ++P + S +      ++ EL RLG+ +     G     +E+CR F+  F
Sbjct: 287 LSKHLETVIKSKIPGIQSLINKTIAELEAELTRLGKPVAADAGGKLYAIMEICRSFDQIF 346

Query: 129 LQLITTGEGSGWKIVASFEGNFPNRIKQLPLDRRFDINNVQRIVLEADGYQPYLISPEKG 188
              +      G KI   F+   P  +K+L  D++  + N+++++ EADGYQP+LI+PE+G
Sbjct: 347 KDHLDGVRPGGDKIYNVFDNQLPAALKRLQFDKQLSMENIRKLITEADGYQPHLIAPEQG 406

Query: 189 LRSLIKGVLELAKEPSRLSVDEVIEPLKHVHRVLVGMVSAAANATPGLGRYPLFKREVVA 248
            R LI+  L   + P+  +VD        VH +L  +V  A + T  L +YP  + EV A
Sbjct: 407 YRRLIESSLITIRGPAESAVDA-------VHSLLKDLVHKAMSETLDLKQYPGLRVEVGA 459

Query: 249 IASAALDGFKNEARKMVVALVDMERAFVPPQHFIRLVQ 286
            +  +L+  ++E+++  + LVDME  ++    F +L Q
Sbjct: 460 ASVDSLERMRDESKRATLQLVDMECGYLTVDFFRKLPQ 497

Microtubule-associated force-producing protein that is targeted to the forming cell plate during cytokinesis. May be involved in attaching Golgi-derived vesicles to microtubules which direct vesicles to the forming cell plate during cytokinesis. Possesses intrinsic GTPase activity in vitro.

Glycine max (taxid: 3847)

>sp|P54861|DNM1_YEAST Dynamin-related protein DNM1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=DNM1 PE=1 SV=1

 Score = 61.6 bits (148), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 57/232 (24%), Positives = 97/232 (41%), Gaps = 19/232 (8%)

Query: 58  SQLGRIALADDLAQLIRKRMKVRVPNLLSGLQGKSQIVQDELVRLGEQMVQSVEGTRSLS 117
           ++ G   LA  L Q +   ++ ++P++ + L       + EL R G     + E   SL 
Sbjct: 309 TKCGTRYLAKLLNQTLLSHIRDKLPDIKTKLNTLISQTEQELARYGGVGATTNESRASLV 368

Query: 118 LELCREFEDKFLQLI--------TTGEGSGWKIVASFEGNFPNRIKQLPLDRRFDINNVQ 169
           L+L  +F   F+  I        T     G +I   +   F N +K +       + +V+
Sbjct: 369 LQLMNKFSTNFISSIDGTSSDINTKELCGGARIYYIYNNVFGNSLKSIDPTSNLSVLDVR 428

Query: 170 RIVLEADGYQPYLISPEKGLRSLIKGVLELAKEPSRLSVDEVIEPL-KHVHRVLVGMVSA 228
             +  + G +P L  PE     L+K  ++L  EPS+  V+ V E L K  H+        
Sbjct: 429 TAIRNSTGPRPTLFVPELAFDLLVKPQIKLLLEPSQRCVELVYEELMKICHKC------- 481

Query: 229 AANATPGLGRYPLFKREVVAIASAALDGFKNEARKMVVALVDMERAFVPPQH 280
               +  L RYP  K  ++ + S  L       R  V +L+D+ RA++   H
Sbjct: 482 ---GSAELARYPKLKSMLIEVISELLRERLQPTRSYVESLIDIHRAYINTNH 530

Microtubule-associated force-producing protein that participates mitochondrial fission. Fission of mitochondria occurs in many cell types and constitutes an important step in mitochondria morphology, which is balanced between fusion and fission. Functions antagonistically with FZO1.

Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292)

EC: 3

EC: .

EC: 6

EC: .

EC: 5

EC: .

EC: 5

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	288
224127734	920	predicted protein [Populus trichocarpa]	0.951	0.297	0.857	1e-137
255564946	823	Dynamin-2A, putative [Ricinus communis]	0.951	0.332	0.861	1e-136
51477379	921	DRP [Cucumis melo]	0.965	0.301	0.843	1e-136
449447543	928	PREDICTED: dynamin-2B-like [Cucumis sati	0.965	0.299	0.843	1e-135
449442106	920	PREDICTED: dynamin-2B-like [Cucumis sati	0.965	0.302	0.815	1e-132
449525041	628	PREDICTED: dynamin-2B-like, partial [Cuc	0.965	0.442	0.819	1e-132
225465253	920	PREDICTED: dynamin-2B [Vitis vinifera] g	0.972	0.304	0.824	1e-132
225460010	931	PREDICTED: dynamin-2B [Vitis vinifera] g	0.965	0.298	0.829	1e-131
4803836	836	a dynamin-like protein ADL3 [Arabidopsis	0.965	0.332	0.818	1e-131
6526977	921	dynamin-like protein [Arabidopsis thalia	0.965	0.301	0.818	1e-130

>gi|224127734|ref|XP_002329164.1| predicted protein [Populus trichocarpa] gi|222870945|gb|EEF08076.1| predicted protein [Populus trichocarpa]

 Score =  492 bits (1267), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 241/281 (85%), Positives = 256/281 (91%), Gaps = 7/281 (2%)

Query: 5   NQGSPKTADIPWVALIGQSVSIATTQSGSEISLETAWTAESESLKSILIGAPQSQLGRIA 64
           NQG PKT DIPW+ALIGQSVSIA+ QSGSE SLETAW AESESLK+IL GAPQS+LGRIA
Sbjct: 226 NQGPPKTTDIPWIALIGQSVSIASAQSGSESSLETAWKAESESLKTILTGAPQSKLGRIA 285

Query: 65  LADDLAQLIRKRMKVRVPNLLSGLQGKSQIVQDELVRLGEQMVQSVEGTRSLSLELCREF 124
           L D LAQ IRKRMKVR+PN+LSGLQGKSQ VQDEL+RLGEQMVQS EGTR+++LELCREF
Sbjct: 286 LLDALAQQIRKRMKVRLPNVLSGLQGKSQTVQDELMRLGEQMVQSAEGTRAIALELCREF 345

Query: 125 EDKFLQLITTGEGSGWKIVASFEGNFPNRIKQLPLDRRFDINNVQRIVLEADGYQPYLIS 184
           EDKFLQ I TGEGSGWKIVASFEGNFPNRIKQLPLDR FDINNV+RIVLEADGYQPYLIS
Sbjct: 346 EDKFLQHIMTGEGSGWKIVASFEGNFPNRIKQLPLDRHFDINNVKRIVLEADGYQPYLIS 405

Query: 185 PEKGLRSLIKGVLELAKEPSRLSVDEVIEPLKHVHRVLVGMVSAAANATPGLGRYPLFKR 244
           PEKGLRSLIKGVLELAKEPSRL VDE       VHRVLV +VSA+ANATPGLGRYP FKR
Sbjct: 406 PEKGLRSLIKGVLELAKEPSRLCVDE-------VHRVLVDIVSASANATPGLGRYPPFKR 458

Query: 245 EVVAIASAALDGFKNEARKMVVALVDMERAFVPPQHFIRLV 285
           EVVAIASAALDGFKNE++KMVVALVDMER FVPPQHFIRLV
Sbjct: 459 EVVAIASAALDGFKNESKKMVVALVDMERVFVPPQHFIRLV 499

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255564946|ref|XP_002523466.1| Dynamin-2A, putative [Ricinus communis] gi|223537294|gb|EEF38925.1| Dynamin-2A, putative [Ricinus communis]

 Score =  491 bits (1263), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 242/281 (86%), Positives = 258/281 (91%), Gaps = 7/281 (2%)

Query: 5   NQGSPKTADIPWVALIGQSVSIATTQSGSEISLETAWTAESESLKSILIGAPQSQLGRIA 64
           NQG PKTADIPW+ALIGQSV+IA+ QSGSE SLETAW AESESLKSIL GAPQS+LGRIA
Sbjct: 227 NQGPPKTADIPWIALIGQSVAIASAQSGSENSLETAWRAESESLKSILTGAPQSKLGRIA 286

Query: 65  LADDLAQLIRKRMKVRVPNLLSGLQGKSQIVQDELVRLGEQMVQSVEGTRSLSLELCREF 124
           L D LAQ IRKR+KVR+PNLLSGLQGKSQIVQDELVRLGEQMV+S EGTR+++LELCREF
Sbjct: 287 LVDALAQQIRKRVKVRLPNLLSGLQGKSQIVQDELVRLGEQMVESPEGTRAIALELCREF 346

Query: 125 EDKFLQLITTGEGSGWKIVASFEGNFPNRIKQLPLDRRFDINNVQRIVLEADGYQPYLIS 184
           EDKFLQ ITTGEG+GWKIVASFEGNFPNRIKQLPLDR FDINNV+RIVLEADGYQPYLIS
Sbjct: 347 EDKFLQHITTGEGAGWKIVASFEGNFPNRIKQLPLDRHFDINNVKRIVLEADGYQPYLIS 406

Query: 185 PEKGLRSLIKGVLELAKEPSRLSVDEVIEPLKHVHRVLVGMVSAAANATPGLGRYPLFKR 244
           PEKGLRSLIKGVLELAKEPSRL VDE       VHRVLV +VSA AN TPGLGRYP FKR
Sbjct: 407 PEKGLRSLIKGVLELAKEPSRLCVDE-------VHRVLVEIVSATANGTPGLGRYPPFKR 459

Query: 245 EVVAIASAALDGFKNEARKMVVALVDMERAFVPPQHFIRLV 285
           EVVAIA+AAL+GFKNEA+KMVVALVDMERAFVPPQHFIRLV
Sbjct: 460 EVVAIATAALEGFKNEAKKMVVALVDMERAFVPPQHFIRLV 500

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|51477379|gb|AAU04752.1| DRP [Cucumis melo]

 Score =  489 bits (1258), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 243/288 (84%), Positives = 259/288 (89%), Gaps = 10/288 (3%)

Query: 1   ALLLNQGSPKTADIPWVALIGQSVSIATTQSGS---EISLETAWTAESESLKSILIGAPQ 57
           ALLLNQG  + +DIPWVALIGQSVSIAT QSGS   E S+ETAW AESESLKSIL GAPQ
Sbjct: 225 ALLLNQGPARASDIPWVALIGQSVSIATAQSGSVGSENSMETAWRAESESLKSILTGAPQ 284

Query: 58  SQLGRIALADDLAQLIRKRMKVRVPNLLSGLQGKSQIVQDELVRLGEQMVQSVEGTRSLS 117
           S+LGR+AL D L+Q IRKRMKVR+PNLLSGLQGKSQ+VQDELVRLGEQMV  VEGTR+L+
Sbjct: 285 SKLGRLALVDALSQQIRKRMKVRLPNLLSGLQGKSQVVQDELVRLGEQMVNGVEGTRALA 344

Query: 118 LELCREFEDKFLQLITTGEGSGWKIVASFEGNFPNRIKQLPLDRRFDINNVQRIVLEADG 177
           LELCREFEDKFLQ I +GEG+GWKIVASFEGNFPNRIKQLPLDR FDINNV+RIVLEADG
Sbjct: 345 LELCREFEDKFLQHIGSGEGAGWKIVASFEGNFPNRIKQLPLDRHFDINNVKRIVLEADG 404

Query: 178 YQPYLISPEKGLRSLIKGVLELAKEPSRLSVDEVIEPLKHVHRVLVGMVSAAANATPGLG 237
           YQPYLISPEKGLRSLIKGVLELAKEPSRL VDE       VHRVL+ +VSAAAN TPGLG
Sbjct: 405 YQPYLISPEKGLRSLIKGVLELAKEPSRLCVDE-------VHRVLIDIVSAAANGTPGLG 457

Query: 238 RYPLFKREVVAIASAALDGFKNEARKMVVALVDMERAFVPPQHFIRLV 285
           RYP FKREVVAIASAALDGFKNEA+KMVVALVDMERAFVPPQHFIRLV
Sbjct: 458 RYPPFKREVVAIASAALDGFKNEAKKMVVALVDMERAFVPPQHFIRLV 505

Source: Cucumis melo

Species: Cucumis melo

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449447543|ref|XP_004141527.1| PREDICTED: dynamin-2B-like [Cucumis sativus] gi|449481470|ref|XP_004156193.1| PREDICTED: dynamin-2B-like [Cucumis sativus]

 Score =  488 bits (1256), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 243/288 (84%), Positives = 259/288 (89%), Gaps = 10/288 (3%)

Query: 1   ALLLNQGSPKTADIPWVALIGQSVSIATTQSGS---EISLETAWTAESESLKSILIGAPQ 57
           ALLLNQG  + +DIPWVALIGQSVSIAT QSGS   E S+ETAW AESESLKSIL GAPQ
Sbjct: 228 ALLLNQGPARASDIPWVALIGQSVSIATAQSGSVGSENSMETAWRAESESLKSILSGAPQ 287

Query: 58  SQLGRIALADDLAQLIRKRMKVRVPNLLSGLQGKSQIVQDELVRLGEQMVQSVEGTRSLS 117
           S+LGR+AL D L+Q IRKRMKVR+PNLLSGLQGKSQ+VQDELVRLGEQMV  VEGTR+L+
Sbjct: 288 SKLGRLALVDALSQQIRKRMKVRLPNLLSGLQGKSQVVQDELVRLGEQMVNGVEGTRALA 347

Query: 118 LELCREFEDKFLQLITTGEGSGWKIVASFEGNFPNRIKQLPLDRRFDINNVQRIVLEADG 177
           LELCREFEDKFLQ I +GEG+GWKIVASFEGNFPNRIKQLPLDR FDINNV+RIVLEADG
Sbjct: 348 LELCREFEDKFLQHIGSGEGAGWKIVASFEGNFPNRIKQLPLDRHFDINNVKRIVLEADG 407

Query: 178 YQPYLISPEKGLRSLIKGVLELAKEPSRLSVDEVIEPLKHVHRVLVGMVSAAANATPGLG 237
           YQPYLISPEKGLRSLIKGVLELAKEPSRL VDE       VHRVL+ +VSAAAN TPGLG
Sbjct: 408 YQPYLISPEKGLRSLIKGVLELAKEPSRLCVDE-------VHRVLIDIVSAAANGTPGLG 460

Query: 238 RYPLFKREVVAIASAALDGFKNEARKMVVALVDMERAFVPPQHFIRLV 285
           RYP FKREVVAIASAALDGFKNEA+KMVVALVDMERAFVPPQHFIRLV
Sbjct: 461 RYPPFKREVVAIASAALDGFKNEAKKMVVALVDMERAFVPPQHFIRLV 508

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449442106|ref|XP_004138823.1| PREDICTED: dynamin-2B-like [Cucumis sativus]

 Score =  477 bits (1228), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 235/288 (81%), Positives = 257/288 (89%), Gaps = 10/288 (3%)

Query: 1   ALLLNQGSPKTADIPWVALIGQSVSIATTQSGS---EISLETAWTAESESLKSILIGAPQ 57
           ALLLNQG P+ +DIPW+ALIGQSVSIAT QSGS   E SLETAW AESESLKSIL GAPQ
Sbjct: 228 ALLLNQGPPRASDIPWIALIGQSVSIATAQSGSVGSENSLETAWRAESESLKSILTGAPQ 287

Query: 58  SQLGRIALADDLAQLIRKRMKVRVPNLLSGLQGKSQIVQDELVRLGEQMVQSVEGTRSLS 117
           S+LGRIAL D LA  I+ RMKVR+PNLLSGLQGKSQ+VQ+EL + G+QM +S EGTR+++
Sbjct: 288 SKLGRIALVDALAHQIQNRMKVRLPNLLSGLQGKSQLVQEELSKFGDQMGESSEGTRAVA 347

Query: 118 LELCREFEDKFLQLITTGEGSGWKIVASFEGNFPNRIKQLPLDRRFDINNVQRIVLEADG 177
           L+LCREFEDKFLQ I TGEG+GWKIVASFEGNFPNRIKQLPLDR FDINNV+RIVLEADG
Sbjct: 348 LQLCREFEDKFLQHIATGEGAGWKIVASFEGNFPNRIKQLPLDRHFDINNVKRIVLEADG 407

Query: 178 YQPYLISPEKGLRSLIKGVLELAKEPSRLSVDEVIEPLKHVHRVLVGMVSAAANATPGLG 237
           YQPYLISPEKGLRSLIKGVLELAKEPSRL VDE       VHRVLV +VSAAAN+TPGLG
Sbjct: 408 YQPYLISPEKGLRSLIKGVLELAKEPSRLCVDE-------VHRVLVDIVSAAANSTPGLG 460

Query: 238 RYPLFKREVVAIASAALDGFKNEARKMVVALVDMERAFVPPQHFIRLV 285
           RYP FKRE+VA+ASAALDGFKNEA+KMVVALVDMERAFVPPQHFIRLV
Sbjct: 461 RYPPFKREIVALASAALDGFKNEAKKMVVALVDMERAFVPPQHFIRLV 508

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449525041|ref|XP_004169529.1| PREDICTED: dynamin-2B-like, partial [Cucumis sativus]

 Score =  477 bits (1228), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 236/288 (81%), Positives = 257/288 (89%), Gaps = 10/288 (3%)

Query: 1   ALLLNQGSPKTADIPWVALIGQSVSIATTQSGS---EISLETAWTAESESLKSILIGAPQ 57
           ALLLNQG P+ +DIPW+ALIGQSVSIAT QSGS   E SLETAW AESESLKSIL GAPQ
Sbjct: 228 ALLLNQGPPRASDIPWIALIGQSVSIATAQSGSVGSENSLETAWRAESESLKSILTGAPQ 287

Query: 58  SQLGRIALADDLAQLIRKRMKVRVPNLLSGLQGKSQIVQDELVRLGEQMVQSVEGTRSLS 117
           S+LGRIAL D LA  I+ RMKVR+PNLLSGLQGKSQIVQ+EL + G+QM +S EGTR+++
Sbjct: 288 SKLGRIALVDALAHQIQNRMKVRLPNLLSGLQGKSQIVQEELSKFGDQMGESSEGTRAVA 347

Query: 118 LELCREFEDKFLQLITTGEGSGWKIVASFEGNFPNRIKQLPLDRRFDINNVQRIVLEADG 177
           L+LCREFEDKFLQ I TGEG+GWKIVASFEGNFPNRIKQLPLDR FDINNV+RIVLEADG
Sbjct: 348 LQLCREFEDKFLQHIATGEGAGWKIVASFEGNFPNRIKQLPLDRHFDINNVKRIVLEADG 407

Query: 178 YQPYLISPEKGLRSLIKGVLELAKEPSRLSVDEVIEPLKHVHRVLVGMVSAAANATPGLG 237
           YQPYLISPEKGLRSLIKGVLELAKEPSRL VDE       VHRVLV +VSAAAN+TPGLG
Sbjct: 408 YQPYLISPEKGLRSLIKGVLELAKEPSRLCVDE-------VHRVLVDIVSAAANSTPGLG 460

Query: 238 RYPLFKREVVAIASAALDGFKNEARKMVVALVDMERAFVPPQHFIRLV 285
           RYP FKRE+VA+ASAALDGFKNEA+KMVVALVDMERAFVPPQHFIRLV
Sbjct: 461 RYPPFKREIVALASAALDGFKNEAKKMVVALVDMERAFVPPQHFIRLV 508

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225465253|ref|XP_002268311.1| PREDICTED: dynamin-2B [Vitis vinifera] gi|297739464|emb|CBI29646.3| unnamed protein product [Vitis vinifera]

 Score =  476 bits (1224), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 239/290 (82%), Positives = 258/290 (88%), Gaps = 10/290 (3%)

Query: 1   ALLLNQGSPKTADIPWVALIGQSVSIATTQSG---SEISLETAWTAESESLKSILIGAPQ 57
           ALL NQG   T+DIPWVALIGQSVSIA+ QSG   SE SLETAW AESE+LKSIL GAPQ
Sbjct: 222 ALLSNQGPRSTSDIPWVALIGQSVSIASAQSGNAGSENSLETAWRAESETLKSILPGAPQ 281

Query: 58  SQLGRIALADDLAQLIRKRMKVRVPNLLSGLQGKSQIVQDELVRLGEQMVQSVEGTRSLS 117
           ++LGR+AL D LAQ IR RMKVR+PNLLSGLQGKSQIVQ+ELVRLGEQMV SVEGTR+++
Sbjct: 282 NKLGRVALVDALAQQIRNRMKVRLPNLLSGLQGKSQIVQEELVRLGEQMVDSVEGTRAIA 341

Query: 118 LELCREFEDKFLQLITTGEGSGWKIVASFEGNFPNRIKQLPLDRRFDINNVQRIVLEADG 177
           L+LCREFEDKFLQ +  GEGSGWK+VASFEGNFPNRIKQLPLD+ FDINNV+RIVLEADG
Sbjct: 342 LQLCREFEDKFLQHLAHGEGSGWKVVASFEGNFPNRIKQLPLDKHFDINNVKRIVLEADG 401

Query: 178 YQPYLISPEKGLRSLIKGVLELAKEPSRLSVDEVIEPLKHVHRVLVGMVSAAANATPGLG 237
           YQPYLISPEKGLRSLIK VLELAKEPSRL VDE       VHRVLV +VSAAANATPGLG
Sbjct: 402 YQPYLISPEKGLRSLIKIVLELAKEPSRLCVDE-------VHRVLVDIVSAAANATPGLG 454

Query: 238 RYPLFKREVVAIASAALDGFKNEARKMVVALVDMERAFVPPQHFIRLVQR 287
           RYP FKREVVAIAS AL+GFKNEA+KMVVALVDMERAFVPPQHFIRLVQR
Sbjct: 455 RYPPFKREVVAIASTALEGFKNEAKKMVVALVDMERAFVPPQHFIRLVQR 504

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225460010|ref|XP_002271285.1| PREDICTED: dynamin-2B [Vitis vinifera] gi|297734796|emb|CBI17030.3| unnamed protein product [Vitis vinifera]

 Score =  473 bits (1217), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 239/288 (82%), Positives = 254/288 (88%), Gaps = 10/288 (3%)

Query: 1   ALLLNQGSPKTADIPWVALIGQSVSIATTQSGS---EISLETAWTAESESLKSILIGAPQ 57
           ALLLNQG   T+++PWVALIGQSVSIA+ QSGS   E SLETAW AESESLKSIL GAPQ
Sbjct: 224 ALLLNQGPRSTSEMPWVALIGQSVSIASAQSGSVGSENSLETAWRAESESLKSILTGAPQ 283

Query: 58  SQLGRIALADDLAQLIRKRMKVRVPNLLSGLQGKSQIVQDELVRLGEQMVQSVEGTRSLS 117
           S+LGRIAL D LAQ IR RMKVR+PNLLSGLQGKSQIV DEL RLGEQMV S EGTR+++
Sbjct: 284 SKLGRIALVDALAQQIRSRMKVRLPNLLSGLQGKSQIVGDELARLGEQMVHSSEGTRAIA 343

Query: 118 LELCREFEDKFLQLITTGEGSGWKIVASFEGNFPNRIKQLPLDRRFDINNVQRIVLEADG 177
           LELCREFEDKFL  I  GEG+GWK+VASFEGNFPNRIKQLPLDR FDINNV+RIVLEADG
Sbjct: 344 LELCREFEDKFLLHIAGGEGAGWKVVASFEGNFPNRIKQLPLDRHFDINNVKRIVLEADG 403

Query: 178 YQPYLISPEKGLRSLIKGVLELAKEPSRLSVDEVIEPLKHVHRVLVGMVSAAANATPGLG 237
           YQPYLISPEKGLRSLIKGVLELAKEPSRL VDE       VHRVLV +VSAAANATPGLG
Sbjct: 404 YQPYLISPEKGLRSLIKGVLELAKEPSRLCVDE-------VHRVLVDVVSAAANATPGLG 456

Query: 238 RYPLFKREVVAIASAALDGFKNEARKMVVALVDMERAFVPPQHFIRLV 285
           RYP FKREVVAIA+AALD FKNEA+KMVVALVDMERAFVPPQHFIRLV
Sbjct: 457 RYPPFKREVVAIATAALDVFKNEAKKMVVALVDMERAFVPPQHFIRLV 504

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|4803836|dbj|BAA77516.1| a dynamin-like protein ADL3 [Arabidopsis thaliana]

 Score =  472 bits (1214), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 234/286 (81%), Positives = 254/286 (88%), Gaps = 8/286 (2%)

Query: 1   ALLLNQGSPKTADIPWVALIGQSVSIATTQSG-SEISLETAWTAESESLKSILIGAPQSQ 59
           ALL NQG PKT DIPWVALIGQSVSIA+ QSG SE SLETAW AESESLKSIL GAPQS+
Sbjct: 221 ALLSNQGPPKTTDIPWVALIGQSVSIASAQSGGSENSLETAWRAESESLKSILTGAPQSK 280

Query: 60  LGRIALADDLAQLIRKRMKVRVPNLLSGLQGKSQIVQDELVRLGEQMVQSVEGTRSLSLE 119
           LGRIAL D LA  IR RMK+R+PN+L+GLQGKSQIVQDEL RLGEQ+V S EGTR+++LE
Sbjct: 281 LGRIALVDTLASQIRSRMKLRLPNILTGLQGKSQIVQDELARLGEQLVSSAEGTRAIALE 340

Query: 120 LCREFEDKFLQLITTGEGSGWKIVASFEGNFPNRIKQLPLDRRFDINNVQRIVLEADGYQ 179
           LCREFEDKFL  +  GEGSGWK+VASFEGNFPNRIK+LPLDR FD+NNV+RIVLEADGYQ
Sbjct: 341 LCREFEDKFLLHLAGGEGSGWKVVASFEGNFPNRIKKLPLDRHFDLNNVKRIVLEADGYQ 400

Query: 180 PYLISPEKGLRSLIKGVLELAKEPSRLSVDEVIEPLKHVHRVLVGMVSAAANATPGLGRY 239
           PYLISPEKGLRSLIK VLELAK+P+RL VDE       VHRVLV +VSA+ANATPGLGRY
Sbjct: 401 PYLISPEKGLRSLIKTVLELAKDPARLCVDE-------VHRVLVDIVSASANATPGLGRY 453

Query: 240 PLFKREVVAIASAALDGFKNEARKMVVALVDMERAFVPPQHFIRLV 285
           P FKREVVAIASAALDGFKNEA+KMVVALVDMERAFVPPQHFIRLV
Sbjct: 454 PPFKREVVAIASAALDGFKNEAKKMVVALVDMERAFVPPQHFIRLV 499

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|6526977|dbj|BAA88113.1| dynamin-like protein [Arabidopsis thaliana]

 Score =  471 bits (1213), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 234/286 (81%), Positives = 254/286 (88%), Gaps = 8/286 (2%)

Query: 1   ALLLNQGSPKTADIPWVALIGQSVSIATTQSG-SEISLETAWTAESESLKSILIGAPQSQ 59
           ALL NQG PKT DIPWVALIGQSVSIA+ QSG SE SLETAW AESESLKSIL GAPQS+
Sbjct: 222 ALLSNQGPPKTTDIPWVALIGQSVSIASAQSGGSENSLETAWRAESESLKSILTGAPQSK 281

Query: 60  LGRIALADDLAQLIRKRMKVRVPNLLSGLQGKSQIVQDELVRLGEQMVQSVEGTRSLSLE 119
           LGRIAL D LA  IR RMK+R+PN+L+GLQGKSQIVQDEL RLGEQ+V S EGTR+++LE
Sbjct: 282 LGRIALVDTLASQIRSRMKLRLPNILTGLQGKSQIVQDELARLGEQLVSSAEGTRAIALE 341

Query: 120 LCREFEDKFLQLITTGEGSGWKIVASFEGNFPNRIKQLPLDRRFDINNVQRIVLEADGYQ 179
           LCREFEDKFL  +  GEGSGWK+VASFEGNFPNRIK+LPLDR FD+NNV+RIVLEADGYQ
Sbjct: 342 LCREFEDKFLLHLAGGEGSGWKVVASFEGNFPNRIKKLPLDRHFDLNNVKRIVLEADGYQ 401

Query: 180 PYLISPEKGLRSLIKGVLELAKEPSRLSVDEVIEPLKHVHRVLVGMVSAAANATPGLGRY 239
           PYLISPEKGLRSLIK VLELAK+P+RL VDE       VHRVLV +VSA+ANATPGLGRY
Sbjct: 402 PYLISPEKGLRSLIKTVLELAKDPARLCVDE-------VHRVLVDIVSASANATPGLGRY 454

Query: 240 PLFKREVVAIASAALDGFKNEARKMVVALVDMERAFVPPQHFIRLV 285
           P FKREVVAIASAALDGFKNEA+KMVVALVDMERAFVPPQHFIRLV
Sbjct: 455 PPFKREVVAIASAALDGFKNEAKKMVVALVDMERAFVPPQHFIRLV 500

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	288
TAIR|locus:2202847	920	DL3 "dynamin-like 3" [Arabidop	0.972	0.304	0.819	1.4e-117
TAIR|locus:2012763	914	ADL6 "dynamin-like protein 6"	0.972	0.306	0.815	4.9e-117
TAIR|locus:2101482	624	DL1E "DYNAMIN-like 1E" [Arabid	0.954	0.440	0.317	5.9e-32
TAIR|locus:2042371	612	DL1D "DYNAMIN-like 1D" [Arabid	0.899	0.423	0.324	1.1e-30
TAIR|locus:2006777	614	DL1C "DYNAMIN-like 1C" [Arabid	0.899	0.421	0.317	1.9e-30
TAIR|locus:2076780	610	DL1B "DYNAMIN-like 1B" [Arabid	0.767	0.362	0.320	1.7e-27
TAIR|locus:2165805	610	DL1 "dynamin-like protein" [Ar	0.902	0.426	0.288	1.2e-25
UNIPROTKB|Q39821	610	Q39821 "Dynamin-related protei	0.937	0.442	0.269	6.6e-24
SGD|S000003924	757	DNM1 "Dynamin-related GTPase i	0.739	0.281	0.254	1e-07
UNIPROTKB|G4N7U4	802	MGG_06361 "Dynamin-A" [Magnapo	0.923	0.331	0.234	4.2e-06

TAIR|locus:2202847 DL3 "dynamin-like 3" [Arabidopsis thaliana (taxid:3702)]

 Score = 1158 (412.7 bits), Expect = 1.4e-117, P = 1.4e-117
 Identities = 236/288 (81%), Positives = 256/288 (88%)

Query:     1 ALLLNQGSPKTADIPWVALIGQSVSIATTQSG-SEISLETAWTAESESLKSILIGAPQSQ 59
             ALL NQG PKT DIPWVALIGQSVSIA+ QSG SE SLETAW AESESLKSIL GAPQS+
Sbjct:   221 ALLSNQGPPKTTDIPWVALIGQSVSIASAQSGGSENSLETAWRAESESLKSILTGAPQSK 280

Query:    60 LGRIALADDLAQLIRKRMKVRVPNLLSGLQGKSQIVQDELVRLGEQMVQSVEGTRSLSLE 119
             LGRIAL D LA  IR RMK+R+PN+L+GLQGKSQIVQDEL RLGEQ+V S EGTR+++LE
Sbjct:   281 LGRIALVDTLASQIRSRMKLRLPNILTGLQGKSQIVQDELARLGEQLVSSAEGTRAIALE 340

Query:   120 LCREFEDKFLQLITTGEGSGWKIVASFEGNFPNRIKQLPLDRRFDINNVQRIVLEADGYQ 179
             LCREFEDKFL  +  GEGSGWK+VASFEGNFPNRIK+LPLDR FD+NNV+RIVLEADGYQ
Sbjct:   341 LCREFEDKFLLHLAGGEGSGWKVVASFEGNFPNRIKKLPLDRHFDLNNVKRIVLEADGYQ 400

Query:   180 PYLISPEKGLRSLIKGVLELAKEPSRLSVDEVIEPLKHVHRVLVGMVSAAANATPGLGRY 239
             PYLISPEKGLRSLIK VLELAK+P+RL VDEV       HRVLV +VSA+ANATPGLGRY
Sbjct:   401 PYLISPEKGLRSLIKTVLELAKDPARLCVDEV-------HRVLVDIVSASANATPGLGRY 453

Query:   240 PLFKREVVAIASAALDGFKNEARKMVVALVDMERAFVPPQHFIRLVQR 287
             P FKREVVAIASAALDGFKNEA+KMVVALVDMERAFVPPQHFIRLVQR
Sbjct:   454 PPFKREVVAIASAALDGFKNEAKKMVVALVDMERAFVPPQHFIRLVQR 501

GO:0003924 "GTPase activity" evidence=IEA;ISS

GO:0005525 "GTP binding" evidence=IEA

GO:0005543 "phospholipid binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0005886 "plasma membrane" evidence=IDA

GO:0005773 "vacuole" evidence=IDA

GO:0005829 "cytosol" evidence=IDA

GO:0009504 "cell plate" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

GO:0030276 "clathrin binding" evidence=IDA

GO:0045334 "clathrin-coated endocytic vesicle" evidence=IDA

GO:0072583 "clathrin-mediated endocytosis" evidence=IDA

GO:0009737 "response to abscisic acid stimulus" evidence=IDA

GO:0009506 "plasmodesma" evidence=IDA

TAIR|locus:2012763 ADL6 "dynamin-like protein 6" [Arabidopsis thaliana (taxid:3702)]

 Score = 1153 (410.9 bits), Expect = 4.9e-117, P = 4.9e-117
 Identities = 235/288 (81%), Positives = 256/288 (88%)

Query:     1 ALLLNQGSPKTADIPWVALIGQSVSIATTQSGS-EISLETAWTAESESLKSILIGAPQSQ 59
             ALL NQG PKT DIPWVA+IGQSVSIA+ QSGS E SLETAW AESESLKSIL GAPQS+
Sbjct:   221 ALLSNQGPPKTTDIPWVAVIGQSVSIASAQSGSGENSLETAWRAESESLKSILTGAPQSK 280

Query:    60 LGRIALADDLAQLIRKRMKVRVPNLLSGLQGKSQIVQDELVRLGEQMVQSVEGTRSLSLE 119
             LGRIAL D LA  IR RMK+R+P++LSGLQGKSQIVQDEL RLGEQ+V S EGTR+++LE
Sbjct:   281 LGRIALVDTLASQIRSRMKLRLPSVLSGLQGKSQIVQDELARLGEQLVNSAEGTRAIALE 340

Query:   120 LCREFEDKFLQLITTGEGSGWKIVASFEGNFPNRIKQLPLDRRFDINNVQRIVLEADGYQ 179
             LCREFEDKFL  +  GEGSGWK+VASFEGNFPNRIKQLPLDR FD+NNV+R+VLEADGYQ
Sbjct:   341 LCREFEDKFLLHLAGGEGSGWKVVASFEGNFPNRIKQLPLDRHFDLNNVKRVVLEADGYQ 400

Query:   180 PYLISPEKGLRSLIKGVLELAKEPSRLSVDEVIEPLKHVHRVLVGMVSAAANATPGLGRY 239
             PYLISPEKGLRSLIK VLELAK+P+RL VDEV       HRVLV +VSA+ANATPGLGRY
Sbjct:   401 PYLISPEKGLRSLIKIVLELAKDPARLCVDEV-------HRVLVDIVSASANATPGLGRY 453

Query:   240 PLFKREVVAIASAALDGFKNEARKMVVALVDMERAFVPPQHFIRLVQR 287
             P FKREVVAIASAALDGFKNEA+KMVVALVDMERAFVPPQHFIRLVQR
Sbjct:   454 PPFKREVVAIASAALDGFKNEAKKMVVALVDMERAFVPPQHFIRLVQR 501

GO:0003924 "GTPase activity" evidence=IEA;ISS

GO:0005525 "GTP binding" evidence=IEA

GO:0005543 "phospholipid binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0006896 "Golgi to vacuole transport" evidence=IMP

GO:0005886 "plasma membrane" evidence=IDA

GO:0005774 "vacuolar membrane" evidence=IDA

GO:0016020 "membrane" evidence=IDA

GO:0009506 "plasmodesma" evidence=IDA

TAIR|locus:2101482 DL1E "DYNAMIN-like 1E" [Arabidopsis thaliana (taxid:3702)]

 Score = 356 (130.4 bits), Expect = 5.9e-32, P = 5.9e-32
 Identities = 91/287 (31%), Positives = 151/287 (52%)

Query:     1 ALLLNQGSPKTADIPWVALIGQSVSIATTQSGSEISLETAWTAESESLK-SILIGAPQSQ 59
             AL + +G       PWV ++ +S +         + +  A   E E    S   G   S+
Sbjct:   228 ALEVLEGRSYRLQHPWVGIVNRSQA----DINKNVDMMLARRKEREYFDTSPDYGHLASK 283

Query:    60 LGRIALADDLAQLIRKRMKVRVPNLLSGLQGKSQIVQDELVRLGEQMVQSVEGTRSLSLE 119
             +G   LA  L++ +   ++ R+P++LS +    + ++ EL R+G  +           LE
Sbjct:   284 MGSEYLAKLLSKHLESVIRTRIPSILSLINKSIEELERELDRMGRPVAVDAGAQLYTILE 343

Query:   120 LCREFEDKFLQLITTGEGSGWKIVASFEGNFPNRIKQLPLDRRFDINNVQRIVLEADGYQ 179
             +CR F+  F + +  G   G +I   F+   P  +K+LP DR   + +V++IV EADGYQ
Sbjct:   344 MCRAFDKIFKEHLDGGRPGGDRIYGVFDNQLPAALKKLPFDRHLSLQSVKKIVSEADGYQ 403

Query:   180 PYLISPEKGLRSLIKGVLELAKEPSRLSVDEVIEPLKHVHRVLVGMVSAAANATPGLGRY 239
             P+LI+PE+G R LI+G L   + P+  SVD V       H VL  +V  + + T  L R+
Sbjct:   404 PHLIAPEQGYRRLIEGALGYFRGPAEASVDAV-------HYVLKELVRKSISETEELKRF 456

Query:   240 PLFKREVVAIASAALDGFKNEARKMVVALVDMERAFVPPQHFIRLVQ 286
             P  + E+ A A+++L+ F+ E++K V+ LVDME A++  + F +L Q
Sbjct:   457 PSLQVELAAAANSSLEKFREESKKSVIRLVDMESAYLTAEFFRKLPQ 503

GO:0003924 "GTPase activity" evidence=IEA;ISS

GO:0005525 "GTP binding" evidence=IEA;ISS

GO:0005737 "cytoplasm" evidence=ISM

GO:0016192 "vesicle-mediated transport" evidence=ISS

GO:0005773 "vacuole" evidence=IDA

GO:0046686 "response to cadmium ion" evidence=IEP

GO:0005886 "plasma membrane" evidence=IDA

GO:0005739 "mitochondrion" evidence=IDA

GO:0050832 "defense response to fungus" evidence=RCA;IMP

GO:0005774 "vacuolar membrane" evidence=IDA

GO:0009506 "plasmodesma" evidence=IDA

GO:0000165 "MAPK cascade" evidence=RCA

GO:0006612 "protein targeting to membrane" evidence=RCA

GO:0009595 "detection of biotic stimulus" evidence=RCA

GO:0009697 "salicylic acid biosynthetic process" evidence=RCA

GO:0009862 "systemic acquired resistance, salicylic acid mediated signaling pathway" evidence=RCA

GO:0009867 "jasmonic acid mediated signaling pathway" evidence=RCA

GO:0010200 "response to chitin" evidence=RCA

GO:0010310 "regulation of hydrogen peroxide metabolic process" evidence=RCA

GO:0010363 "regulation of plant-type hypersensitive response" evidence=RCA

GO:0031348 "negative regulation of defense response" evidence=RCA

GO:0042742 "defense response to bacterium" evidence=RCA

GO:0043900 "regulation of multi-organism process" evidence=RCA

TAIR|locus:2042371 DL1D "DYNAMIN-like 1D" [Arabidopsis thaliana (taxid:3702)]

 Score = 344 (126.2 bits), Expect = 1.1e-30, P = 1.1e-30
 Identities = 88/271 (32%), Positives = 144/271 (53%)

Query:    15 PWVALIGQSVSIATTQSGSEISLETAWTAESESLK-SILIGAPQSQLGRIALADDLAQLI 73
             PWV ++ +S +         + +  A   E E  + S   G   +++G   LA  L++L+
Sbjct:   237 PWVGIVNRSQA----DINKNVDMMVARRKEREYFETSPDYGHLATRMGSEYLAKLLSKLL 292

Query:    74 RKRMKVRVPNLLSGLQGKSQIVQDELVRLGEQMVQSVEGTRSLSLELCREFEDKFLQLIT 133
                ++ R+P++LS +    + ++ EL +LG  +           L +CR FE  F + + 
Sbjct:   293 ESVIRSRIPSILSLINNNIEELERELDQLGRPIAIDAGAQLYTILGMCRAFEKIFKEHLD 352

Query:   134 TGEGSGWKIVASFEGNFPNRIKQLPLDRRFDINNVQRIVLEADGYQPYLISPEKGLRSLI 193
              G   G +I   F+ N P  IK+LP DR   + +V+RIV E+DGYQP+LI+PE G R LI
Sbjct:   353 GGRPGGARIYGIFDYNLPTAIKKLPFDRHLSLQSVKRIVSESDGYQPHLIAPELGYRRLI 412

Query:   194 KGVLELAKEPSRLSVDEVIEPLKHVHRVLVGMVSAAANATPGLGRYPLFKREVVAIASAA 253
             +G L   + P+  SV+ +       H +L  +V  A   T  L R+P  + E+VA A+++
Sbjct:   413 EGSLNHFRGPAEASVNAI-------HLILKELVRKAIAETEELKRFPSLQIELVAAANSS 465

Query:   254 LDGFKNEARKMVVALVDMERAFVPPQHFIRL 284
             LD F+ E+ K V+ LVDME +++    F +L
Sbjct:   466 LDKFREESMKSVLRLVDMESSYLTVDFFRKL 496

GO:0003924 "GTPase activity" evidence=IEA;ISS

GO:0005525 "GTP binding" evidence=IEA;ISS

GO:0005737 "cytoplasm" evidence=ISM

TAIR|locus:2006777 DL1C "DYNAMIN-like 1C" [Arabidopsis thaliana (taxid:3702)]

 Score = 342 (125.4 bits), Expect = 1.9e-30, P = 1.9e-30
 Identities = 86/271 (31%), Positives = 141/271 (52%)

Query:    15 PWVALIGQSVSIATTQSGSEISLETAWTAESESLK-SILIGAPQSQLGRIALADDLAQLI 73
             PWV ++ +S +         + +  A   E E  + S   G   S++G   LA  L+Q +
Sbjct:   237 PWVGIVNRSQA----DINKRVDMIAARRKEQEYFETSPEYGHLASRMGSEYLAKLLSQHL 292

Query:    74 RKRMKVRVPNLLSGLQGKSQIVQDELVRLGEQMVQSVEGTRSLSLELCREFEDKFLQLIT 133
                ++ ++P++++ +      +  EL R+G  +           LELCR F+  F + + 
Sbjct:   293 ETVIRQKIPSIVALINKSIDEINAELDRIGRPIAVDSGAQLYTILELCRAFDRVFKEHLD 352

Query:   134 TGEGSGWKIVASFEGNFPNRIKQLPLDRRFDINNVQRIVLEADGYQPYLISPEKGLRSLI 193
              G   G +I   F+   P  +K+LP DR     NVQ++V EADGYQP+LI+PE+G R LI
Sbjct:   353 GGRPGGDRIYGVFDHQLPAALKKLPFDRHLSTKNVQKVVSEADGYQPHLIAPEQGYRRLI 412

Query:   194 KGVLELAKEPSRLSVDEVIEPLKHVHRVLVGMVSAAANATPGLGRYPLFKREVVAIASAA 253
              G +   K P+  +VD V       H VL  +V  + + T  L R+P    ++ A A+ A
Sbjct:   413 DGSISYFKGPAEATVDAV-------HFVLKELVRKSISETEELKRFPTLASDIAAAANEA 465

Query:   254 LDGFKNEARKMVVALVDMERAFVPPQHFIRL 284
             L+ F++E+RK V+ LVDME +++  + F +L
Sbjct:   466 LERFRDESRKTVLRLVDMESSYLTVEFFRKL 496

GO:0003924 "GTPase activity" evidence=IEA;ISS

GO:0005525 "GTP binding" evidence=IEA;ISS

GO:0005737 "cytoplasm" evidence=ISM;IDA

GO:0009504 "cell plate" evidence=IDA

GO:0010152 "pollen maturation" evidence=IMP

GO:0000266 "mitochondrial fission" evidence=IMP

GO:0007005 "mitochondrion organization" evidence=IMP

GO:0005886 "plasma membrane" evidence=IDA

GO:0016020 "membrane" evidence=IDA

GO:0005938 "cell cortex" evidence=IDA

GO:0005739 "mitochondrion" evidence=IDA

GO:0009506 "plasmodesma" evidence=IDA

GO:0042732 "D-xylose metabolic process" evidence=RCA

TAIR|locus:2076780 DL1B "DYNAMIN-like 1B" [Arabidopsis thaliana (taxid:3702)]

 Score = 315 (115.9 bits), Expect = 1.7e-27, P = 1.7e-27
 Identities = 73/228 (32%), Positives = 123/228 (53%)

Query:    59 QLGRIALADDLAQLIRKRMKVRVPNLLSGLQGKSQIVQDELVRLGEQMVQSVEGTRSLSL 118
             ++G   L   L++ +   +K R+P L S +      ++ EL RLG+ +     G   + +
Sbjct:   277 RMGSEYLGKMLSKHLEVVIKSRIPGLQSLITKTISELETELSRLGKPVAADAGGKLYMIM 336

Query:   119 ELCREFEDKFLQLITTGEGSGWKIVASFEGNFPNRIKQLPLDRRFDINNVQRIVLEADGY 178
             E+CR F+  F + +      G KI + F+  FP  IK+L  D+   ++NV++++ EADGY
Sbjct:   337 EICRAFDQTFKEHLDGTRSGGEKINSVFDNQFPAAIKRLQFDKHLSMDNVRKLITEADGY 396

Query:   179 QPYLISPEKGLRSLIKGVLELAKEPSRLSVDEVIEPLKHVHRVLVGMVSAAANATPGLGR 238
             QP+LI+PE+G R LI+  L   + P+  +VD V       H +L  ++  +   T  L +
Sbjct:   397 QPHLIAPEQGYRRLIESCLVSIRGPAEAAVDAV-------HSILKDLIHKSMGETSELKQ 449

Query:   239 YPLFKREVVAIASAALDGFKNEARKMVVALVDMERAFVPPQHFIRLVQ 286
             YP  + EV   A  +LD  ++E+RK  + LVDME  ++  + F +L Q
Sbjct:   450 YPTLRVEVSGAAVDSLDRMRDESRKATLLLVDMESGYLTVEFFRKLPQ 497

GO:0003924 "GTPase activity" evidence=IEA;ISS

GO:0005525 "GTP binding" evidence=IEA;ISS

GO:0005737 "cytoplasm" evidence=ISM

TAIR|locus:2165805 DL1 "dynamin-like protein" [Arabidopsis thaliana (taxid:3702)]

 Score = 298 (110.0 bits), Expect = 1.2e-25, P = 1.2e-25
 Identities = 79/274 (28%), Positives = 140/274 (51%)

Query:    15 PWVALIGQSVSIATTQSGSEISLETAWTAESESLKSIL-IGAPQSQLGRIALADDLAQLI 73
             PWV ++ +S +         + +  A   E E   +        +++G   LA  L++ +
Sbjct:   236 PWVGVVNRSQA----DINKNVDMIAARKREREYFSNTTEYRHLANKMGSEHLAKMLSKHL 291

Query:    74 RKRMKVRVPNLLSGLQGKSQI-VQDELVRLGEQMVQSVEGTRSLSLELCREFEDKFLQLI 132
              + +K R+P + S L  K+ + ++ EL RLG+ +     G     +E+CR F+  F + +
Sbjct:   292 ERVIKSRIPGIQS-LINKTVLELETELSRLGKPIAADAGGKLYSIMEICRLFDQIFKEHL 350

Query:   133 TTGEGSGWKIVASFEGNFPNRIKQLPLDRRFDINNVQRIVLEADGYQPYLISPEKGLRSL 192
                   G K+   F+   P  +K+L  D++  ++N++++V EADGYQP+LI+PE+G R L
Sbjct:   351 DGVRAGGEKVYNVFDNQLPAALKRLQFDKQLAMDNIRKLVTEADGYQPHLIAPEQGYRRL 410

Query:   193 IKGVLELAKEPSRLSVDEVIEPLKHVHRVLVGMVSAAANATPGLGRYPLFKREVVAIASA 252
             I+  +   + P+  SVD V       H +L  +V  + N T  L +YP  + EV   A  
Sbjct:   411 IESSIVSIRGPAEASVDTV-------HAILKDLVHKSVNETVELKQYPALRVEVTNAAIE 463

Query:   253 ALDGFKNEARKMVVALVDMERAFVPPQHFIRLVQ 286
             +LD  +  ++K  + LVDME +++    F +L Q
Sbjct:   464 SLDKMREGSKKATLQLVDMECSYLTVDFFRKLPQ 497

GO:0003924 "GTPase activity" evidence=IEA;IDA

GO:0005525 "GTP binding" evidence=IEA;ISS

GO:0005737 "cytoplasm" evidence=ISM

GO:0000911 "cytokinesis by cell plate formation" evidence=IGI

GO:0009504 "cell plate" evidence=IDA

GO:0009793 "embryo development ending in seed dormancy" evidence=IGI

GO:0009920 "cell plate formation involved in plant-type cell wall biogenesis" evidence=IGI

GO:0010091 "trichome branching" evidence=IMP

GO:0005773 "vacuole" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

GO:0005874 "microtubule" evidence=IDA

GO:0010051 "xylem and phloem pattern formation" evidence=IMP

GO:0005886 "plasma membrane" evidence=IDA

GO:0005774 "vacuolar membrane" evidence=IDA

GO:0043424 "protein histidine kinase binding" evidence=IPI

GO:0030276 "clathrin binding" evidence=IDA

GO:0072583 "clathrin-mediated endocytosis" evidence=IDA

GO:0005829 "cytosol" evidence=IDA

GO:0009506 "plasmodesma" evidence=IDA

GO:0032880 "regulation of protein localization" evidence=RCA

GO:0009535 "chloroplast thylakoid membrane" evidence=IDA

UNIPROTKB|Q39821 Q39821 "Dynamin-related protein 12A" [Glycine max (taxid:3847)]

 Score = 282 (104.3 bits), Expect = 6.6e-24, P = 6.6e-24
 Identities = 76/282 (26%), Positives = 137/282 (48%)

Query:     6 QGSPKTADIPWVALIGQSVSIATTQSGSEISLETAWTAESESLKSIL-IGAPQSQLGRIA 64
             +G       PW+ ++ +S           + +  A   E E   S        +++G   
Sbjct:   227 EGRAYRLKFPWIGVVNRSQQ----DINKNVDMIAARRREREYFNSTPEYKHLANRMGSEH 282

Query:    65 LADDLAQLIRKRMKVRVPNLLSGLQGKSQIVQDELVRLGEQMVQSVEGTRSLSLELCREF 124
             LA  L++ +   +K ++P + S +      ++ EL RLG+ +     G     +E+CR F
Sbjct:   283 LAKMLSKHLETVIKSKIPGIQSLINKTIAELEAELTRLGKPVAADAGGKLYAIMEICRSF 342

Query:   125 EDKFLQLITTGEGSGWKIVASFEGNFPNRIKQLPLDRRFDINNVQRIVLEADGYQPYLIS 184
             +  F   +      G KI   F+   P  +K+L  D++  + N+++++ EADGYQP+LI+
Sbjct:   343 DQIFKDHLDGVRPGGDKIYNVFDNQLPAALKRLQFDKQLSMENIRKLITEADGYQPHLIA 402

Query:   185 PEKGLRSLIKGVLELAKEPSRLSVDEVIEPLKHVHRVLVGMVSAAANATPGLGRYPLFKR 244
             PE+G R LI+  L   + P+  +VD V       H +L  +V  A + T  L +YP  + 
Sbjct:   403 PEQGYRRLIESSLITIRGPAESAVDAV-------HSLLKDLVHKAMSETLDLKQYPGLRV 455

Query:   245 EVVAIASAALDGFKNEARKMVVALVDMERAFVPPQHFIRLVQ 286
             EV A +  +L+  ++E+++  + LVDME  ++    F +L Q
Sbjct:   456 EVGAASVDSLERMRDESKRATLQLVDMECGYLTVDFFRKLPQ 497

GO:0005515 "protein binding" evidence=IPI

SGD|S000003924 DNM1 "Dynamin-related GTPase involved in mitochondrial organization" [Saccharomyces cerevisiae (taxid:4932)]

 Score = 151 (58.2 bits), Expect = 1.0e-07, P = 1.0e-07
 Identities = 59/232 (25%), Positives = 102/232 (43%)

Query:    58 SQLGRIALADDLAQLIRKRMKVRVPNLLSGLQGKSQIVQDELVRLGEQMVQSVEGTRSLS 117
             ++ G   LA  L Q +   ++ ++P++ + L       + EL R G     + E   SL 
Sbjct:   309 TKCGTRYLAKLLNQTLLSHIRDKLPDIKTKLNTLISQTEQELARYGGVGATTNESRASLV 368

Query:   118 LELCREFEDKFLQLI--TTGEGS------GWKIVASFEGNFPNRIKQLPLDRRFDINNVQ 169
             L+L  +F   F+  I  T+ + +      G +I   +   F N +K +       + +V+
Sbjct:   369 LQLMNKFSTNFISSIDGTSSDINTKELCGGARIYYIYNNVFGNSLKSIDPTSNLSVLDVR 428

Query:   170 RIVLEADGYQPYLISPEKGLRSLIKGVLELAKEPSRLSVDEVIEPLKHV-HRVLVGMVSA 228
               +  + G +P L  PE     L+K  ++L  EPS+  V+ V E L  + H+   G  SA
Sbjct:   429 TAIRNSTGPRPTLFVPELAFDLLVKPQIKLLLEPSQRCVELVYEELMKICHKC--G--SA 484

Query:   229 AANATPGLGRYPLFKREVVAIASAALDGFKNEARKMVVALVDMERAFVPPQH 280
                    L RYP  K  ++ + S  L       R  V +L+D+ RA++   H
Sbjct:   485 E------LARYPKLKSMLIEVISELLRERLQPTRSYVESLIDIHRAYINTNH 530

GO:0005777 "peroxisome" evidence=IDA

GO:0003924 "GTPase activity" evidence=IEA;IDA

GO:0005741 "mitochondrial outer membrane" evidence=IEA;IDA

GO:0005739 "mitochondrion" evidence=IEA;IDA

GO:0000166 "nucleotide binding" evidence=IEA

GO:0007031 "peroxisome organization" evidence=IGI;IMP

GO:0000001 "mitochondrion inheritance" evidence=IGI

GO:0005525 "GTP binding" evidence=IEA

GO:0001300 "chronological cell aging" evidence=IMP

GO:0000266 "mitochondrial fission" evidence=IGI;IMP

GO:0006184 "GTP catabolic process" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0016559 "peroxisome fission" evidence=IGI

GO:0007005 "mitochondrion organization" evidence=IMP

GO:0042803 "protein homodimerization activity" evidence=IDA

GO:0051260 "protein homooligomerization" evidence=IDA

GO:0042802 "identical protein binding" evidence=IDA

GO:0016787 "hydrolase activity" evidence=IEA

UNIPROTKB|G4N7U4 MGG_06361 "Dynamin-A" [Magnaporthe oryzae 70-15 (taxid:242507)]

 Score = 137 (53.3 bits), Expect = 4.2e-06, P = 4.2e-06
 Identities = 68/290 (23%), Positives = 120/290 (41%)

Query:     1 ALLLNQGSPKTADIPWVALIGQSVSIATTQSGSEISLETAWTAESESLKSI-LIGAPQSQ 59
             AL +  G      + WV ++ +S        G++  +E A  AES+  K         ++
Sbjct:   234 ALDILSGRVYPLKLGWVGVVNRSQQDI---QGNK-PMEDALKAESDFFKHHPAYRNISTR 289

Query:    60 LGRIALADDLAQLIRKRMKVRVPNLLSGLQGKSQIVQDELVRLGEQMVQSVEGTRSLSLE 119
              G   LA  L Q +   ++ R+P++ + L       Q EL   G+      E   SL L+
Sbjct:   290 CGTYFLAKTLNQTLMSHIRDRLPDIKARLNTLMGQTQQELASYGDMHFHGKEHRGSLILQ 349

Query:   120 LCREFEDKFLQLI--TTGEGS------GWKIVASFEGNFPNRIKQLPLDRRFDINNVQRI 171
             L   F   F+  I  T+ E S      G +I   F   F + ++ +         +++  
Sbjct:   350 LMTRFATSFISSIDGTSTEISTKELCGGARIYYIFNSVFGSSLESIDPTSNLTALDIRTA 409

Query:   172 VLEADGYQPYLISPEKGLRSLIKGVLELAKEPSRLSVDEVIEPL-KHVHRVLVGMVSAAA 230
             +  + G +P L  PE     L+K  ++L + PS+  V+ V E L K  H           
Sbjct:   410 IRNSTGPRPSLFVPELAFDLLVKPQIKLLELPSQRCVELVYEELIKICH---------TC 460

Query:   231 NATPGLGRYPLFKREVVAIASAALDGFKNEARKMVVALVDMERAFVPPQH 280
              +T  L R+P  + +++ + S  L      A   V +L+ ++RA++   H
Sbjct:   461 GSTE-LSRFPRLQAKLIEVVSDLLRERLGPASTYVESLISIQRAYINTNH 509

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9LQ55	DRP2B_ARATH	3, ., 6, ., 5, ., 5	0.8181	0.9652	0.3021	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: estExt_Genewise1_v1.C_1250046 hypothetical protein (920 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	288
pfam01031	296	pfam01031, Dynamin_M, Dynamin central region	2e-19

>gnl|CDD|216255 pfam01031, Dynamin_M, Dynamin central region

 Score = 85.3 bits (212), Expect = 2e-19
 Identities = 62/239 (25%), Positives = 91/239 (38%), Gaps = 31/239 (12%)

Query: 65  LADDLAQL----IRKRMKVRVPNLLSGLQGKSQIVQDELVRLGEQMVQSVEGTRSLS-LE 119
           LA  L Q     IRK +    P+L S +  K Q  + EL R G          +    L+
Sbjct: 62  LAKKLNQELVNHIRKSL----PDLKSQINKKLQETEKELERYG-DDPPEDPAEKGAFLLD 116

Query: 120 LCREFEDKFLQLITTGEGS---------GWKIVASFEGNFPNRIKQLPLDRRFDINNVQR 170
           L   F   F  LI  GE           G +I   F   FP  +K +    +     ++ 
Sbjct: 117 LITAFNQDFKNLID-GEEDDLSTNELSGGARIRYIFHEWFPKLLKSIDPFEKLSDEEIRT 175

Query: 171 IVLEADGYQPYLISPEKGLRSLIKGVLELAKEPSRLSVDEVIEPLKHVHRVLVGMVSAAA 230
            +    G +  L  PEK    L+K  ++  +EP+   VD V E L+ +            
Sbjct: 176 AIRNYRGRRLPLFVPEKAFELLVKKQIKRLEEPALKCVDLVYEELRRIFL---------K 226

Query: 231 NATPGLGRYPLFKREVVAIASAALDGFKNEARKMVVALVDMERAFVPPQH--FIRLVQR 287
            A+  L R+P  K  +  +    L        KMV  L+DME A++   H  FI  +Q 
Sbjct: 227 IASKELSRFPNLKEAIKEVVEDILREQLEPTEKMVRDLIDMELAYINTNHPDFIGGLQA 285

This region lies between the GTPase domain, see pfam00350, and the pleckstrin homology (PH) domain, see pfam00169. Length = 296

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	288
PF01031	295	Dynamin_M: Dynamin central region; InterPro: IPR00	100.0
KOG0446	657	consensus Vacuolar sorting protein VPS1, dynamin,	100.0
COG0699	546	Predicted GTPases (dynamin-related) [General funct	98.66
KOG0447	980	consensus Dynamin-like GTP binding protein [Genera	95.96
cd05131	339	RasGAP_IQGAP2 IQGAP2 is a member of the IQGAP fami	85.23

>PF01031 Dynamin_M: Dynamin central region; InterPro: IPR000375 Dynamin is a microtubule-associated force-producing protein of 100 Kd which is involved in the production of microtubule bundles

Probab=100.00  E-value=1e-65  Score=471.97  Aligned_cols=266  Identities=23%  Similarity=0.324  Sum_probs=237.4

Q ss_pred             CCCcccCCCeEEEecCCcchhhhccCCcccHHHHHHHHHHHhccCC-CCCCCCCcchHHHHHHHHHHHHHHhhccchhHH
Q 044156            7 GSPKTADIPWVALIGQSVSIATTQSGSEISLETAWTAESESLKSIL-IGAPQSQLGRIALADDLAQLIRKRMKVRVPNLL   85 (288)
Q Consensus         7 g~~~~L~lG~~~V~nr~q~~~~~di~~~~s~~~a~~~E~~FF~~~p-~~~~~~~~G~~~L~~~L~~lL~~hI~~~LP~l~   85 (288)
                      |+++||+|||||||||||    +||++++|+++|++.|++||++|| |+.++++|||++|+.+|+++|++||+++||.|+
T Consensus         7 n~~~pLklGy~~V~nrsq----~di~~~~s~~~a~~~E~~fF~~~~~~~~~~~~~G~~~L~~~L~~~L~~~I~~~LP~l~   82 (295)
T PF01031_consen    7 NKVIPLKLGYVGVKNRSQ----QDINDGKSIEEARQKEKEFFSNHPWYSSPADRCGTPALRKRLSELLVEHIRKSLPSLK   82 (295)
T ss_dssp             TSSS--TT-EEEE--S-H----HHHHTTEEHHHHHHHHHHHHHHSTTTGGGGGGSSHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCeeccCCCeEEEecCCc----cccccCCCHHHHHHHHHHHHhcccccCCcccccchHHHHHHHHHHHHHHHHHhCcHHH
Confidence            446999999999999999    999999999999999999999998 888889999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHhCCCCCCCHhHHHHHHHHHHHHHHHHHHHhhccCCC---------CcchhHhhhhcchhhhhcc
Q 044156           86 SGLQGKSQIVQDELVRLGEQMVQSVEGTRSLSLELCREFEDKFLQLITTGEG---------SGWKIVASFEGNFPNRIKQ  156 (288)
Q Consensus        86 ~~I~~~l~~~~~eL~~lg~~~~~~~~~~~~~ll~~i~~F~~~~~~~l~G~~~---------ggari~~~f~~~F~~~i~~  156 (288)
                      .+|+++|.+++++|.+||+++++++++++.+|++++++|++.++++++|.+.         ||+||+++|++.|...+..
T Consensus        83 ~~I~~~l~~~~~eL~~lG~~~~~~~~~~~~~l~~~~~~f~~~~~~~i~G~~~~~~~~~~l~~~ari~~~f~~~~~~~~~~  162 (295)
T PF01031_consen   83 SEIQKKLQEAEKELKRLGPPRPETPEEQRAYLLQIISKFSRIFKDAIDGEYSDEFSTNELRGGARIRYIFNEWFDKFLEK  162 (295)
T ss_dssp             HHHHHHHHHHHHHHHTHHHCSSSCHHHHHHHHHHHHHHHHHHHHHHHTT-------TTS--HHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHHHhcCCccccccccccchhhHHHHHHHhhhhhhhhh
Confidence            9999999999999999999998788899999999999999999999999983         6899999999999999999


Q ss_pred             CCCCCccChhhHHHHHHHhcCCCCCCCCCHHHHHHHHHHHHHhhhchHHHHHHhhhhhhhHHHHHHHHHHHHHhccCCCC
Q 044156          157 LPLDRRFDINNVQRIVLEADGYQPYLISPEKGLRSLIKGVLELAKEPSRLSVDEVIEPLKHVHRVLVGMVSAAANATPGL  236 (288)
Q Consensus       157 ~~~~~~~~~~~I~~~i~~~~G~~~~~fvp~~afe~li~~~i~~l~~Ps~~~v~~v~~~l~~V~~~l~~~v~~~~~~~~~~  236 (288)
                      +++.+..+.++|+++|++++|+++|+|+|+.+|+.||+++|++|++||.+|++.       |++++.+++.+++.  ++|
T Consensus       163 ~~~~~~~~~~eI~~~i~~~~G~elp~f~p~~afe~Li~~~i~~l~~Pa~~cv~~-------V~~~l~~i~~~~~~--~~~  233 (295)
T PF01031_consen  163 IDPFEDLSDEEIRTAIRNSRGRELPGFVPESAFESLIRKQIEKLEEPALQCVEE-------VHEELQRIVEQVLE--KEF  233 (295)
T ss_dssp             TSHHHHHHHHHHHHHHHH--S-SSS-SCCHHHHHHHHHHHHHTTHHHHHHHHHH-------HHHHHHHHHHHHHC--HHH
T ss_pred             hccccchhHHHHHHHHHhhcccccccchhHHHHHHHHHHHHHHHHhHHHHHHHH-------HHHHHHHHHHhhcc--hhc
Confidence            865555556999999999999999999999999999999999999999999999       88888999999887  699


Q ss_pred             CCChhHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCCchhhhhhh
Q 044156          237 GRYPLFKREVVAIASAALDGFKNEARKMVVALVDMERAFVPPQHFIRLV  285 (288)
Q Consensus       237 ~~fp~L~~~i~~~i~~~L~~~~~~a~~~v~~li~~E~~~Intnh~~~~~  285 (288)
                      .+||.|++++.+++.++++++.++|.++|+++|+||.+||||+|+.++.
T Consensus       234 ~~fp~L~~~i~~~v~~~l~~~~~~a~~~i~~li~~E~~~i~T~~~~f~~  282 (295)
T PF01031_consen  234 ERFPNLKEAIKEAVQQLLEECREPAKEMIENLIDMELSYINTQHPDFLG  282 (295)
T ss_dssp             TTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTS--TTSTT--T
T ss_pred             CCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCHHHHH
Confidence            9999999999999999999999999999999999999999999998764

At the N terminus of dynamin is a GTPase domain (see IPR001401 from INTERPRO), and at the C terminus is a PH domain (see IPR001849 from INTERPRO). Between these two domains lies a central region of unknown function, which this entry represents.; GO: 0005525 GTP binding; PDB: 3ZVR_A 2AKA_B 2X2F_D 2X2E_D 3SNH_A 3ZYS_D 3ZYC_D 1JWY_B 1JX2_B 3SZR_A ....

>KOG0446 consensus Vacuolar sorting protein VPS1, dynamin, and related proteins [Intracellular trafficking, secretion, and vesicular transport; General function prediction only]

Probab=100.00  E-value=2e-46  Score=372.87  Aligned_cols=264  Identities=30%  Similarity=0.408  Sum_probs=248.9

Q ss_pred             CCCCCcccCCCeEEEecCCcchhhhccCCcccHHHHHHHHHHHhccCC-CCCCCCCcchHHHHHHHHHHHHHHhhccchh
Q 044156            5 NQGSPKTADIPWVALIGQSVSIATTQSGSEISLETAWTAESESLKSIL-IGAPQSQLGRIALADDLAQLIRKRMKVRVPN   83 (288)
Q Consensus         5 n~g~~~~L~lG~~~V~nr~q~~~~~di~~~~s~~~a~~~E~~FF~~~p-~~~~~~~~G~~~L~~~L~~lL~~hI~~~LP~   83 (288)
                      ..|+.+||++||++|+||+|    +||+.++++.+|+.+|..||.+|| |+.++.++|+++|+++|+..|..||+.+||.
T Consensus       222 L~g~~~~l~~g~v~vvnR~q----~di~~~k~~~~al~~e~~~f~~~p~y~~~~~~~g~p~La~~L~~~l~~hi~~~lP~  297 (657)
T KOG0446|consen  222 LVGRPITLKVGYVGVVNRSQ----SIIDFKKSILEALNDEVPSFESVPSYPILLTISGVPYLALLLPGYLQSHIRDQLPE  297 (657)
T ss_pred             ecCCccccccceeeeeccch----hhhhhhhhHHHHHHhhhhhhhccccccccccccCcchHHHHHHHHHHHHHHhcCcH
Confidence            56888999999999999999    999999999999999999999999 9999988999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHhCCCCCCCHhHHHHHHHHHHHHHHHHHHHhhccCC--------CCcchhHhhhhcchhhhhc
Q 044156           84 LLSGLQGKSQIVQDELVRLGEQMVQSVEGTRSLSLELCREFEDKFLQLITTGE--------GSGWKIVASFEGNFPNRIK  155 (288)
Q Consensus        84 l~~~I~~~l~~~~~eL~~lg~~~~~~~~~~~~~ll~~i~~F~~~~~~~l~G~~--------~ggari~~~f~~~F~~~i~  155 (288)
                      |+..|+.++.++++||..||.  +++..++...++.++++|+..|...+.|..        +|||||+++||+.|+..+.
T Consensus       298 l~~~i~~~~~~~~~el~~~g~--~~~~~~~~~~ll~~i~~~~~~~~~~v~g~~~~~~~~elsggari~~~F~~~f~~~i~  375 (657)
T KOG0446|consen  298 LKTKINKLLEKYQDELNRIGA--VDVDLANSAALLAIIREDPRGLRTGVIGKLDLVPTKALSGGARINYPFHGGFPGVIK  375 (657)
T ss_pred             HHHHHHHHHHHHHHHHHHhcc--cCCccchhhHHHHHHHHHHHHHHHhhcccccccchhcccchhhhhhhhhhccchhhh
Confidence            999999999999999999997  333445688999999999999999998883        5889999999999999999


Q ss_pred             cCCCCCccChhhHHHHHHHhcCCCCCCCCCHHHHHHHHHHHHHhhhchHHHHHHhhhhhhhHHHHHHHHHHHHHhccCCC
Q 044156          156 QLPLDRRFDINNVQRIVLEADGYQPYLISPEKGLRSLIKGVLELAKEPSRLSVDEVIEPLKHVHRVLVGMVSAAANATPG  235 (288)
Q Consensus       156 ~~~~~~~~~~~~I~~~i~~~~G~~~~~fvp~~afe~li~~~i~~l~~Ps~~~v~~v~~~l~~V~~~l~~~v~~~~~~~~~  235 (288)
                      .+++.+.....+|++++.|++|.++++|+|+.+|+.+|+++|+++++|+++||+.       |++++.+++++|...+ .
T Consensus       376 ~i~~~~~~~~~~i~~~i~~~~G~~~~lf~p~~afe~lvk~~i~~l~~p~l~~v~~-------v~~el~~~~~~~~~~~-~  447 (657)
T KOG0446|consen  376 KLPPDRKLLGQNIEKLVSEASGIRPSLFVPESSFESLVKGQIQSLRDPSLKCVEE-------VHRELVRIVADSIRAT-E  447 (657)
T ss_pred             cCCcchhhhHHHHHHHHHhccCCCccccCChHHHHHHHHHHHHHHhhhHHHHHHH-------HHHHHHHHHHHHhhhH-H
Confidence            9977777777999999999999999999999999999999999999999999999       8999999999998733 7


Q ss_pred             CCCChhHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCCchhhh
Q 044156          236 LGRYPLFKREVVAIASAALDGFKNEARKMVVALVDMERAFVPPQHFI  282 (288)
Q Consensus       236 ~~~fp~L~~~i~~~i~~~L~~~~~~a~~~v~~li~~E~~~Intnh~~  282 (288)
                      +.|||.|++++..++.++++++.++++++|.++|+||.+||||+|..
T Consensus       448 l~rfp~l~~~~~~~~~~~~~~~~~~t~~~v~~~i~~e~~yinT~h~d  494 (657)
T KOG0446|consen  448 LKRFPVLYSELVEIASSLIAEGLDETKKAVKNLIDLEQSYLNTDHPD  494 (657)
T ss_pred             HHHhHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHhcCcChh
Confidence            99999999999999999999999999999999999999999999965

>COG0699 Predicted GTPases (dynamin-related) [General function prediction only]

Probab=98.66  E-value=7.7e-07  Score=87.61  Aligned_cols=239  Identities=15%  Similarity=0.117  Sum_probs=184.0

Q ss_pred             CCCCCCcc--cCCCeEEEecCCcchhhhccCCcccHHHHHHHHHHHhccCC-CCCCCCCcchHHHHHHHHHHHHHHhhcc
Q 044156            4 LNQGSPKT--ADIPWVALIGQSVSIATTQSGSEISLETAWTAESESLKSIL-IGAPQSQLGRIALADDLAQLIRKRMKVR   80 (288)
Q Consensus         4 ~n~g~~~~--L~lG~~~V~nr~q~~~~~di~~~~s~~~a~~~E~~FF~~~p-~~~~~~~~G~~~L~~~L~~lL~~hI~~~   80 (288)
                      .|.|....  +..|++.++|+.+    .|+...++...+...|..+|..+| |.+....+|++++...++.++..|+...
T Consensus       126 ~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  201 (546)
T COG0699         126 LNGGTNLTLILGNGDVLVVDALE----TDIQLLKTALEALVKELEYFAEHPLLEDNEKLVLLPYLKKLLSKILELHLRLL  201 (546)
T ss_pred             HhcCCceeeeeccccccccCchh----HHHHhcccchHHHHHHHHHhhcCccccccccccCChhhhhhhhhhHHHHHHhc
Confidence            35555556  8999999999999    999999999999999999999998 9888889999999999999999999999


Q ss_pred             chhHHHHHHHHHHHHHHHHHHhCCCCCCCHhHHHHHHHHHHHHHHHHHHHhhccCCCCcchhHhhhhcchhhhhccC-CC
Q 044156           81 VPNLLSGLQGKSQIVQDELVRLGEQMVQSVEGTRSLSLELCREFEDKFLQLITTGEGSGWKIVASFEGNFPNRIKQL-PL  159 (288)
Q Consensus        81 LP~l~~~I~~~l~~~~~eL~~lg~~~~~~~~~~~~~ll~~i~~F~~~~~~~l~G~~~ggari~~~f~~~F~~~i~~~-~~  159 (288)
                      .|...........+      .++.+          .++.....|...++....|.     |+...        +..+ +.
T Consensus       202 ~~~~~~~~~~~~~~------~~~~~----------~~~~~~~~~~~~~~~~~~~~-----~~~~~--------~~~~~~l  252 (546)
T COG0699         202 PKYDKLQDVIQLSQ------DLFEN----------EVLAVIQTLLKRLSELVRGA-----RIRLN--------IILFSDL  252 (546)
T ss_pred             ChhhhhHhhhcccc------cccch----------HHHHHHHHHHHHHHHHhccc-----hhhhh--------hcccchH
Confidence            99987777666554      22221          56777777777776444433     44433        1111 12


Q ss_pred             CCccChhhHHHHHHHhcCCCCCCCCCHHHHHHHHHHHHHhhhchHHHHHHhhhhhhhHHHHHHHHHHHHHhccCCCCCCC
Q 044156          160 DRRFDINNVQRIVLEADGYQPYLISPEKGLRSLIKGVLELAKEPSRLSVDEVIEPLKHVHRVLVGMVSAAANATPGLGRY  239 (288)
Q Consensus       160 ~~~~~~~~I~~~i~~~~G~~~~~fvp~~afe~li~~~i~~l~~Ps~~~v~~v~~~l~~V~~~l~~~v~~~~~~~~~~~~f  239 (288)
                      .+..+ .++.....+..|..+..|.....+...+..++..+..++.+|+..       +.+++.++...... ......|
T Consensus       253 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~-------~~~~l~~~~~~~~~-~~~~~~~  323 (546)
T COG0699         253 EEVSD-SPVLLKELASKGERPSLLSGLTLLDTLVETPIGQFDTQINQLLRK-------LISELVRILLKELE-SASSSPF  323 (546)
T ss_pred             HHhhh-hhhHHHHHcccCCCccccccccchhhhhHHHHHHHHHHHHHHHHH-------HHHHHHHHHHhhhc-ccccccc
Confidence            22222 455555666777777688999999999999999999999877776       66666665444332 2456789


Q ss_pred             hhHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCCchhhhhh
Q 044156          240 PLFKREVVAIASAALDGFKNEARKMVVALVDMERAFVPPQHFIRL  284 (288)
Q Consensus       240 p~L~~~i~~~i~~~L~~~~~~a~~~v~~li~~E~~~Intnh~~~~  284 (288)
                      |.+...+...+..............+...++.+..||++.|...+
T Consensus       324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  368 (546)
T COG0699         324 PKLSEALEEVVNQLKNKVDSGLESGLLAIIDIEERYINTKHPLFL  368 (546)
T ss_pred             hhhHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhhcCcchH
Confidence            999999999999999999999999999999999999998886654

>KOG0447 consensus Dynamin-like GTP binding protein [General function prediction only]

Probab=95.96  E-value=0.37  Score=47.82  Aligned_cols=73  Identities=15%  Similarity=0.143  Sum_probs=55.7

Q ss_pred             CCCCcccC-CCeEEEec-CCcchhhhccCCcccHHHHHHHHHHHhccCC-CCC--C-CCCcchHHHHHHHHHHHHHHhhc
Q 044156            6 QGSPKTAD-IPWVALIG-QSVSIATTQSGSEISLETAWTAESESLKSIL-IGA--P-QSQLGRIALADDLAQLIRKRMKV   79 (288)
Q Consensus         6 ~g~~~~L~-lG~~~V~n-r~q~~~~~di~~~~s~~~a~~~E~~FF~~~p-~~~--~-~~~~G~~~L~~~L~~lL~~hI~~   79 (288)
                      .|+-.|.+ ||||+|+- ||-        ...|+++-++-|.+||+++- ++.  + ++.+.+.+|.-..|.-....++.
T Consensus       507 eGKLFPMKALGYfaVVTGrGn--------ssdSIdaIR~YEE~FF~nSkLl~~~vlkphQvTtRNlSLAVSDcFWkMVRe  578 (980)
T KOG0447|consen  507 EGKLFPMKALGYFAVVTGKGN--------SSESIEAIREYEEEFFQNSKLLKTSMLKAHQVTTRNLSLAVSDCFWKMVRE  578 (980)
T ss_pred             hcCccchhhcceeEEEecCCC--------cchhHHHHHHHHHHHhhhhHHHHhhccchhhhcccchhHHHHHHHHHHHHH
Confidence            35666665 89999986 444        34588999999999999985 542  2 48899999999999999988877


Q ss_pred             cchhHHH
Q 044156           80 RVPNLLS   86 (288)
Q Consensus        80 ~LP~l~~   86 (288)
                      ++-+--+
T Consensus       579 siEqQaD  585 (980)
T KOG0447|consen  579 SVEQQAD  585 (980)
T ss_pred             HHHHHHH
Confidence            6554333

>cd05131 RasGAP_IQGAP2 IQGAP2 is a member of the IQGAP family that contains a calponin-homology (CH) domain which binds F-actin, IQGAP-specific repeat, a single WW domain, four IQ motifs which mediate interactions with calmodulin, and a Ras-GTPase-activating protein (GAP)-related domain that binds Rho family GTPases

Probab=85.23  E-value=6.5  Score=37.05  Aligned_cols=219  Identities=12%  Similarity=0.092  Sum_probs=107.6

Q ss_pred             HHHHhccCC-CCCCC-----CCcchHHHHHHHHHHHHHHhhc-cc-----h-hHHHHHHHHHHHHHHHHHHhCCCCC---
Q 044156           44 ESESLKSIL-IGAPQ-----SQLGRIALADDLAQLIRKRMKV-RV-----P-NLLSGLQGKSQIVQDELVRLGEQMV---  107 (288)
Q Consensus        44 E~~FF~~~p-~~~~~-----~~~G~~~L~~~L~~lL~~hI~~-~L-----P-~l~~~I~~~l~~~~~eL~~lg~~~~---  107 (288)
                      ..+||..++ |..+.     .-.|..+|..-|..++.+.|.. .|     | .|-.++-.+.....-....++..++   
T Consensus        29 ~~d~~r~Ns~~~km~~~y~r~~~g~~yLk~lL~p~v~~ii~~~~ldlE~dP~~Iy~~~i~~~e~~tG~~S~~~~~v~~e~  108 (339)
T cd05131          29 IQDIVTGNPTVIKMVVSFNRGARGQNTLRQLLAPVVKEIIEDKSLIINTNPVEVYKAWVNQLETATGEASKLPYDVTTEQ  108 (339)
T ss_pred             HHHHhccCcHHHHHHHHHHcCCccHHHHHHHHHHHHHHHhcCcccCCcCCHHHHHHHHHHHHHHhhCCcccCCCCCCHHH
Confidence            567888886 97642     3488999999888888886642 23     3 2333222221111111112222221   


Q ss_pred             --CCHhH------HHHHHHHHHHHHHHHHHHhhccCCCCcchhHhhhhcchhhhhccCCCCCccChhhHHHHHHH---hc
Q 044156          108 --QSVEG------TRSLSLELCREFEDKFLQLITTGEGSGWKIVASFEGNFPNRIKQLPLDRRFDINNVQRIVLE---AD  176 (288)
Q Consensus       108 --~~~~~------~~~~ll~~i~~F~~~~~~~l~G~~~ggari~~~f~~~F~~~i~~~~~~~~~~~~~I~~~i~~---~~  176 (288)
                        .+++-      ....|..++.+|.+.+.+.++--+.   -|+++.+..+....+.+|-...   +++..++-.   .+
T Consensus       109 Ai~~pev~~~~~~~l~~L~~~~~~fl~~I~~sv~~~P~---~lR~ick~i~~~~~~kFP~~~~---~~~~~~VG~fiflR  182 (339)
T cd05131         109 ALLHPEVRAKLESSIQVLRSVTDKVLGSIMSSLDLIPY---GMRYIAKVLKNSLHEKFPDATE---DELLKIVGNLLYYR  182 (339)
T ss_pred             HhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCH---HHHHHHHHHHHHHHHHCCCCch---HHHHHHHHHHHHHH
Confidence              01111      1234666677777777666664432   3666666555555555542211   122221100   01


Q ss_pred             CCCCCCCCCHHHHHHHHHHH-HHhhhchHHHHHHhhhhhhhHHHHHHHHHHHHHhccCCCCCCChhHHHHHHHHHHHHHH
Q 044156          177 GYQPYLISPEKGLRSLIKGV-LELAKEPSRLSVDEVIEPLKHVHRVLVGMVSAAANATPGLGRYPLFKREVVAIASAALD  255 (288)
Q Consensus       177 G~~~~~fvp~~afe~li~~~-i~~l~~Ps~~~v~~v~~~l~~V~~~l~~~v~~~~~~~~~~~~fp~L~~~i~~~i~~~L~  255 (288)
                      =..|..+.|+. |.. +... =..+...+.+.+..       +..+|..    +++. ..|+.    +..-...+..++.
T Consensus       183 fi~PAIvsPe~-f~i-i~~~~~~~~~~~~rrnL~~-------iaKvLq~----lan~-~~F~~----~e~~m~pLN~fi~  244 (339)
T cd05131         183 YMNPAIVAPDG-FDI-IDMTAGGQIHSDQRRNLGS-------VAKVLQH----AASN-KLFEG----ENDHLSSMNSYLS  244 (339)
T ss_pred             HccchhcCchh-cCc-cccccCCCCCHHHHhhHHH-------HHHHHHH----HHCC-CCCCC----cChHHHhHHHHHH
Confidence            12344444433 211 1000 00011112223333       4444444    4331 23432    2223556788999


Q ss_pred             HhHHHHHHHHHHHHHHhh--cCCCchhhhhhhh
Q 044156          256 GFKNEARKMVVALVDMER--AFVPPQHFIRLVQ  286 (288)
Q Consensus       256 ~~~~~a~~~v~~li~~E~--~~Intnh~~~~~~  286 (288)
                      +.....++++..+++.+-  .+.+.+.|..+++
T Consensus       245 ~~~~~~~~fl~~l~~V~d~e~~~~~d~Y~dl~~  277 (339)
T cd05131         245 QTYQKFRKFFQAACDVPEPEEKFNVDEYSDLVT  277 (339)
T ss_pred             HHHHHHHHHHHHHhcCCCHHHHcChhHHHHHHh
Confidence            999999999999999874  4677777766643

IQGAP2 and IQGAP3 play important roles in the regulation of the cytoskeleton for axon outgrowth in hippocampal neurons and are thought to stay in a common regulatory pathway. The results of RNA interference studies indicated that IQGAP3 partially compensates functions of IQGAP2, but has lesser ability than IQGAP2 to promote axon outgrowth in hippocampal neuron. Morevover, IQGAP2 is required for the cadherin-mediated cell-to-cell adhesion in Xenopus laevis embryos.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	288
3snh_A	743	Crystal Structure Of Nucleotide-Free Human Dynamin1		7e-04

>pdb|3SNH|A Chain A, Crystal Structure Of Nucleotide-Free Human Dynamin1 Length = 743

Iteration: 1
 Score = 41.2 bits (95), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 37/176 (21%), Positives = 71/176 (40%), Gaps = 16/176 (9%)
Query: 105 QMVQSVEGTRSLSLELCREFEDKFLQLITTGEGSGWKIVASFEGNFPNRIKQLPLDRRFD 164
           QMVQ        +++  +  E    Q+ T     G +I   F   FP  + ++  D +  
Sbjct: 328 QMVQQ------FAVDFEKRIEGSGDQIDTYELSGGARINRIFHERFPFELVKMEFDEKEL 381
Query: 165 INNVQRIVLEADGYQPYLISPEKGLRSLIKGVLELAKEPSRLSVDEVIEPLKHVHRVLVG 224
              +   +  A      L +P+    +++K  ++  +EP    VD VI  L         
Sbjct: 382 RREISYAIKNAAAAATGLFTPDMAFETIVKKQVKKIREPCLKCVDMVISEL--------- 432
Query: 225 MVSAAANATPGLGRYPLFKREVVAIASAALDGFKNEARKMVVALVDMERAFVPPQH 280
            +S     T  L +YP  + E+  I +  +   +   ++ V+ L+D+E A++   H
Sbjct: 433 -ISTVRQCTKKLQQYPRLREEMERIVTTHIREREGRTKEQVMLLIDIELAYMNTNH 487

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	288
3zvr_A	772	Dynamin-1; hydrolase, DRP1, DRP, endocytosis, mito	1e-36
3szr_A	608	Interferon-induced GTP-binding protein MX1; interf	1e-19
3t34_A	360	Dynamin-related protein 1A, linker, dynamin-relat	7e-06
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	9e-05

>3zvr_A Dynamin-1; hydrolase, DRP1, DRP, endocytosis, mitochondrial fission, GT stalk, PH, BSE, membrane fission; HET: 1PE; 3.10A {Rattus norvegicus} PDB: 3snh_A Length = 772

 Score =  137 bits (345), Expect = 1e-36
 Identities = 52/291 (17%), Positives = 107/291 (36%), Gaps = 27/291 (9%)

Query: 1   ALLLNQGSPKTADIPWVALIGQSVSIATTQSGSEISLETAWTAESESLKS-ILIGAPQSQ 59
            +L N+  P      ++ ++ +S          +  +  A  AE +   S         +
Sbjct: 238 DVLENKLLP--LRRGYIGVVNRSQK----DIDGKKDITAALAAERKFFLSHPSYRHLADR 291

Query: 60  LGRIALADDLAQLIRKRMKVRVPNLLSGLQGKSQIVQDELVRLGEQMVQSVEGTRSLSLE 119
           +G   L   L Q +   ++  +P L + LQ +   ++ E+                  L+
Sbjct: 292 MGTPYLQKVLNQQLTNHIRDTLPGLRNKLQSQLLSIEKEVDEYKNFRPDDPARKTKALLQ 351

Query: 120 LCREFEDKFLQLITTGEGS---------GWKIVASFEGNFPNRIKQLPLDRRFDINNVQR 170
           + ++F   F + I  G G          G +I   F   FP  + ++  D +     +  
Sbjct: 352 MVQQFAVDFEKRIE-GSGDQIDTYELSGGARINRIFHERFPFELVKMEFDEKELRREISY 410

Query: 171 IVLEADGYQPYLISPEKGLRSLIKGVLELAKEPSRLSVDEVIEPLKHVHRVLVGMVSAAA 230
            +      +  L +P+    + +K  ++  KEPS   VD V+  L    R          
Sbjct: 411 AIKNIHDIRTGLFTPDLAFEATVKKQVQKLKEPSIKCVDMVVSELTSTIR---------- 460

Query: 231 NATPGLGRYPLFKREVVAIASAALDGFKNEARKMVVALVDMERAFVPPQHF 281
             +  L +YP  + E+  I +  +   +   ++ V+ L+D+E A++   H 
Sbjct: 461 KCSEKLQQYPRLREEMERIVTTHIREREGRTKEQVMLLIDIELAYMNTNHE 511

>3szr_A Interferon-induced GTP-binding protein MX1; interferon-induced antiviral GTPase, membrane associated, PR binding; 3.50A {Homo sapiens} PDB: 3zys_B Length = 608

 Score = 87.8 bits (217), Expect = 1e-19
 Identities = 24/233 (10%), Positives = 68/233 (29%), Gaps = 16/233 (6%)

Query: 55  APQSQLGRIALADDLAQLIRKRMKVRVPNLLSGLQGKSQIVQDELVRLGEQMVQSVEGTR 114
             + +     LA+ L   +   +   +P L + ++   Q + +EL + G  + +      
Sbjct: 288 LEEGKATVPCLAEKLTSELITHICKSLPLLENQIKETHQRITEELQKYGVDIPEDENEKM 347

Query: 115 SLSLELCREFEDKFLQLITTGEGS-------GWKIVASFEGNFPNRIKQLPLDRRFDINN 167
              ++    F      L+   E           ++   F               +     
Sbjct: 348 FFLIDKVNAFNQDITALMQGEETVGEEDIRLFTRLRHEFHKWSTIIENNFQEGHKILSRK 407

Query: 168 VQRIVLEADGYQPYLISPEKGLRSLIKGVLELAKEPSRLSVDEVIEPLKHVHRVLVGMVS 227
           +Q+   +A   +       +   +++K  ++  +EP+   +  V + ++     +     
Sbjct: 408 IQKFENQAAAAELPGFVNYRTFETIVKQQIKALEEPAVDMLHTVTDMVRLAFTDV----- 462

Query: 228 AAANATPGLGRYPLFKREVVAIASAALDGFKNEARKMVVALVDMERAFVPPQH 280
               +      +    R   +         + E  K++     ME+       
Sbjct: 463 ----SIKNFEEFFNLHRTAKSKIEDIRAEQEREGEKLIRLHFQMEQIVYGAFQ 511

>3t34_A Dynamin-related protein 1A, linker, dynamin-relat 1A; dynamin-like protein 1A, GTPase, membrane fission, motor Pro; HET: GDP; 2.40A {Arabidopsis thaliana} PDB: 3t35_A* Length = 360

 Score = 46.0 bits (109), Expect = 7e-06
 Identities = 24/123 (19%), Positives = 50/123 (40%), Gaps = 5/123 (4%)

Query: 15  PWVALIGQSVSIATTQSGSEISLETAWTAESESLKSILI-GAPQSQLGRIALADDLAQLI 73
           PWV ++ +S           + +  A   E E   +        +++G   LA  L++ +
Sbjct: 236 PWVGVVNRS----QADINKNVDMIAARKREREYFSNTTEYRHLANKMGSEHLAKMLSKHL 291

Query: 74  RKRMKVRVPNLLSGLQGKSQIVQDELVRLGEQMVQSVEGTRSLSLELCREFEDKFLQLIT 133
            + +K R+P + S +      ++ EL RLG+ +    +     ++   R    K L+L  
Sbjct: 292 ERVIKSRIPGIQSLINKTVLELETELSRLGKPIAHGTDSRVDPAIMERRSAISKRLELYR 351

Query: 134 TGE 136
             +
Sbjct: 352 AAQ 354

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 42.9 bits (100), Expect = 9e-05
 Identities = 37/212 (17%), Positives = 63/212 (29%), Gaps = 64/212 (30%)

Query: 57  QSQLGRIALADDLAQLIRKRMKVR-VPNLLSGLQGKSQIVQDELVRLGEQMVQSVEGTRS 115
           + Q     +              + V ++   +  K +I  D ++        +V GT  
Sbjct: 13  EHQYQYKDILSVFEDAFVDNFDCKDVQDMPKSILSKEEI--DHIIMSK----DAVSGTLR 66

Query: 116 LSLELCREFEDKFLQLITTGEGSGWKIVASF-----EGNFP---NRIKQLPLDR--RFDI 165
           L           F  L++  E    ++V  F       N+    + IK           +
Sbjct: 67  L-----------FWTLLSKQE----EMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRM 111

Query: 166 NNVQRIVLEADG--YQPYLISPEKGLRSLIKGVLELAKEPSRLSVDEVIEPLKHVHRVLV 223
              QR  L  D   +  Y +S  +    L + +LEL              P K+V  ++ 
Sbjct: 112 YIEQRDRLYNDNQVFAKYNVSRLQPYLKLRQALLEL-------------RPAKNV--LID 156

Query: 224 GMVSAAANATPGLGRYPLFKREVVAIASAALD 255
           G+         G G     K   VA     L 
Sbjct: 157 GV--------LGSG-----K-TWVA-LDVCLS 173

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	288
3szr_A	608	Interferon-induced GTP-binding protein MX1; interf	100.0
3zvr_A	772	Dynamin-1; hydrolase, DRP1, DRP, endocytosis, mito	100.0
3ljb_A	271	Interferon-induced GTP-binding protein MX1; four-h	99.96
3t34_A	360	Dynamin-related protein 1A, linker, dynamin-relat	99.71
2x2e_A	353	Dynamin-1; nitration, hydrolase, membrane fission,	99.62
1jwy_B	315	Dynamin A GTPase domain; dynamin, GTPase, GDP, myo	98.63
2aka_B	299	Dynamin-1; fusion protein, GTPase domain, myosin,	98.21

>3szr_A Interferon-induced GTP-binding protein MX1; interferon-induced antiviral GTPase, membrane associated, PR binding; 3.50A {Homo sapiens} PDB: 3zys_B

Probab=100.00  E-value=2.3e-50  Score=401.59  Aligned_cols=261  Identities=11%  Similarity=0.112  Sum_probs=228.7

Q ss_pred             CCCCcccCCCeEEEecCCcchhhhccCCcccHHHHHHHHHHHhccCCC-CCCC--CCcchHHHHHHHHHHHHHHhhccch
Q 044156            6 QGSPKTADIPWVALIGQSVSIATTQSGSEISLETAWTAESESLKSILI-GAPQ--SQLGRIALADDLAQLIRKRMKVRVP   82 (288)
Q Consensus         6 ~g~~~~L~lG~~~V~nr~q~~~~~di~~~~s~~~a~~~E~~FF~~~p~-~~~~--~~~G~~~L~~~L~~lL~~hI~~~LP   82 (288)
                      .|+.+||++||++|+||||    +||+.++|+++|++.|.+||++||| +.+.  +++||++|+++|+++|.+||+++||
T Consensus       240 ~~~~~~l~~g~~~v~nr~~----~~~~~~~~~~~~~~~E~~fF~~~~~~~~~~~~~~~g~~~L~~~L~~~L~~~i~~~lP  315 (608)
T 3szr_A          240 RNLVFHLKKGYMIVKCRGQ----QEIQDQLSLSEALQREKIFFENHPYFRDLLEEGKATVPCLAEKLTSELITHICKSLP  315 (608)
T ss_dssp             --CCSCCSSCEECCCCSCT----TCTTTCCCHHHHTTTHHHHTTTCTTTSGGGGTCC---CCHHHHHHHHHHHHHHHHHH
T ss_pred             hCcccccCceEEEEecCch----hhcccCCCHHHHHHHHHHHHccCccccccCccccccHHHHHHHHHHHHHHHHHHhhH
Confidence            4567999999999999999    9999999999999999999999995 6664  5999999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHHHHhCCCCCCCHhHHHHHHHHHHHHHHHHHHHhhccCCC-C--cchhHhhhhcchhhhhccC-C
Q 044156           83 NLLSGLQGKSQIVQDELVRLGEQMVQSVEGTRSLSLELCREFEDKFLQLITTGEG-S--GWKIVASFEGNFPNRIKQL-P  158 (288)
Q Consensus        83 ~l~~~I~~~l~~~~~eL~~lg~~~~~~~~~~~~~ll~~i~~F~~~~~~~l~G~~~-g--gari~~~f~~~F~~~i~~~-~  158 (288)
                      .|+.+|+.++.++++||.+||+++++++++++.+|++++++|++.++++++|.+. +  ..|++..++..|..|...+ +
T Consensus       316 ~l~~~i~~~l~~~~~el~~lg~~~~~~~~~~~~~l~~~~~~f~~~~~~~~~g~~~~~~~~~~~~~~~~~~f~~~~~~~~~  395 (608)
T 3szr_A          316 LLENQIKETHQRITEELQKYGVDIPEDENEKMFFLIDKVNAFNQDITALMQGEETVGEEDIRLFTRLRHEFHKWSTIIEN  395 (608)
T ss_dssp             HHHHHHHHHHHHHHHHHHTSCCCCCCSHHHHHHHHHHHHHHHHHHHHHHHSSCCCCCTTCCCHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHhCCCCcCCCccccHHHHHHHHHHHHHHHhhh
Confidence            9999999999999999999999999899999999999999999999999999982 2  2688888888888876655 2


Q ss_pred             ----CCCccChhhHHHHHHHhcCCCCCCCCCHHHHHHHHHHHHHhhhchHHHHHHhhhhhhhHHHHHHHHHHHHHhccCC
Q 044156          159 ----LDRRFDINNVQRIVLEADGYQPYLISPEKGLRSLIKGVLELAKEPSRLSVDEVIEPLKHVHRVLVGMVSAAANATP  234 (288)
Q Consensus       159 ----~~~~~~~~~I~~~i~~~~G~~~~~fvp~~afe~li~~~i~~l~~Ps~~~v~~v~~~l~~V~~~l~~~v~~~~~~~~  234 (288)
                          ..... .++|++++++++|+++|+|+|+.+|+.+|++||++|++||..|++.       |++++.+++.+++.  +
T Consensus       396 ~~~~~~~~~-~~~i~~~~~~~~g~~~~~f~~~~~fe~lvk~qi~~l~~Pa~~~v~~-------V~~~v~~~~~~~~~--~  465 (608)
T 3szr_A          396 NFQEGHKIL-SRKIQKFENQAAAAELPGFVNYRTFETIVKQQIKALEEPAVDMLHT-------VTDMVRLAFTDVSI--K  465 (608)
T ss_dssp             HHHHHHHHH-HHHHHHHHHHCCSCSSSCSSCTHHHHHHHHHHHGGGHHHHHHHHHH-------HHHHHHHHHHHHHH--H
T ss_pred             cccccchhH-HHHHHHHHHHccCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHH--H
Confidence                11122 3789999999999999999999999999999999999999999999       55555666655554  5


Q ss_pred             CCCCChhHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCCchh
Q 044156          235 GLGRYPLFKREVVAIASAALDGFKNEARKMVVALVDMERAFVPPQH  280 (288)
Q Consensus       235 ~~~~fp~L~~~i~~~i~~~L~~~~~~a~~~v~~li~~E~~~Intnh  280 (288)
                      +|.+||+|++++.+++.++++++.++|+++|.++|+||..|++.++
T Consensus       466 ~f~rfp~L~~~~~~~i~~~~~~~~~~a~~~i~~li~mE~~~~~~d~  511 (608)
T 3szr_A          466 NFEEFFNLHRTAKSKIEDIRAEQEREGEKLIRLHFQMEQIVYGAFQ  511 (608)
T ss_dssp             HHSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC--
T ss_pred             HHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccCCc
Confidence            8999999999999999999999999999999999999999876543

>3zvr_A Dynamin-1; hydrolase, DRP1, DRP, endocytosis, mitochondrial fission, GT stalk, PH, BSE, membrane fission; HET: 1PE; 3.10A {Rattus norvegicus} PDB: 3snh_A

Probab=100.00  E-value=1.5e-49  Score=400.84  Aligned_cols=263  Identities=17%  Similarity=0.250  Sum_probs=242.2

Q ss_pred             CCcccCCCeEEEecCCcchhhhccCCcccHHHHHHHHHHHhccCC-CCCCCCCcchHHHHHHHHHHHHHHhhccchhHHH
Q 044156            8 SPKTADIPWVALIGQSVSIATTQSGSEISLETAWTAESESLKSIL-IGAPQSQLGRIALADDLAQLIRKRMKVRVPNLLS   86 (288)
Q Consensus         8 ~~~~L~lG~~~V~nr~q~~~~~di~~~~s~~~a~~~E~~FF~~~p-~~~~~~~~G~~~L~~~L~~lL~~hI~~~LP~l~~   86 (288)
                      ...++++||+.|+++|+    .+...-..+.+++..|.+||.++| |..+.+++|+..|++.|++.|..||+++||.|+.
T Consensus       243 ~~~~l~lg~~~VV~iSA----~~G~GvdeL~eaI~~e~~ffpe~P~yd~ltDr~g~~~LaEiLrEkL~~hi~~ELP~l~~  318 (772)
T 3zvr_A          243 KLLPLRRGYIGVVNRSQ----KDIDGKKDITAALAAERKFFLSHPSYRHLADRMGTPYLQKVLNQQLTNHIRDTLPGLRN  318 (772)
T ss_dssp             CSSCCSSCEEECCCCCC----EESSSSEEHHHHHHHHHHHHHHCTTTGGGGGGCSHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HhhhhhccCCceEEecc----cccccchhHHHHHHHHHHhccCCcchhhhhhcccHHHHHHHHHHHHHHHHHhhCccHHH
Confidence            34678899999999999    888877899999999999999997 8777899999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHhCCCCCCCHhHHHHHHHHHHHHHHHHHHHhhccCC--------CCcchhHhhhhcchhhhhccCC
Q 044156           87 GLQGKSQIVQDELVRLGEQMVQSVEGTRSLSLELCREFEDKFLQLITTGE--------GSGWKIVASFEGNFPNRIKQLP  158 (288)
Q Consensus        87 ~I~~~l~~~~~eL~~lg~~~~~~~~~~~~~ll~~i~~F~~~~~~~l~G~~--------~ggari~~~f~~~F~~~i~~~~  158 (288)
                      +|+.++..++.+|++||++++++++++..+|++++++|++.|.++++|++        +||+||+++|++.|+..+.+++
T Consensus       319 ~I~~~l~s~~vele~~~~~~~~~~~~~~~~ll~~~~~f~~~~~~~i~G~~~~~~~~el~ggari~~if~~~f~~~~~~~~  398 (772)
T 3zvr_A          319 KLQSQLLSIEKEVDEYKNFRPDDPARKTKALLQMVQQFAVDFEKRIEGSGDQIDTYELSGGARINRIFHERFPFELVKME  398 (772)
T ss_dssp             HHHHHHHHHHHHHHHHHHHCCCSSSCSHHHHHHHHHHHHHHHHHHHTC---------CCHHHHHHHHHHTHHHHHHHTTS
T ss_pred             HHHHHHHHHHHHHHHhCCCCCCChHHHHHHHHHHHHHHHHHHHHHhCCCCCCcCcccCCCCeeeehhHHHHhHHHHhcCC
Confidence            99999999999999999999888888899999999999999999999998        5899999999999999999998


Q ss_pred             CCCccChhhHHHHHHHhcCCCCCCCCCHHHHHHHHHHHHHhhhchHHHHHHhhhhhhhHHHHHHHHHHHHHhccCCCCCC
Q 044156          159 LDRRFDINNVQRIVLEADGYQPYLISPEKGLRSLIKGVLELAKEPSRLSVDEVIEPLKHVHRVLVGMVSAAANATPGLGR  238 (288)
Q Consensus       159 ~~~~~~~~~I~~~i~~~~G~~~~~fvp~~afe~li~~~i~~l~~Ps~~~v~~v~~~l~~V~~~l~~~v~~~~~~~~~~~~  238 (288)
                      +++..+.++|+++|+|++|.+|++|+|+.+|+.||++||++|++||++||+.       |+++|.+++.+|.   ++|.|
T Consensus       399 ~~~~~~~~~I~~~i~n~~G~~~~lf~p~~~fe~LVk~QI~rl~ePsl~CVdl-------V~~eL~~iv~~~~---~~l~R  468 (772)
T 3zvr_A          399 FDEKELRREISYAIKNIHDIRTGLFTPDLAFEATVKKQVQKLKEPSIKCVDM-------VVSELTSTIRKCS---EKLQQ  468 (772)
T ss_dssp             CCHHHHHHHHHHHHHHCC------CHHHHHHHHHHHHHHHTTHHHHHHHHHH-------HHHHHHHHHHHHG---GGGTT
T ss_pred             CchhhhHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHH---HHhcc
Confidence            8887777999999999999999999999999999999999999999999999       9999999999996   48999


Q ss_pred             ChhHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCCchhhhhh
Q 044156          239 YPLFKREVVAIASAALDGFKNEARKMVVALVDMERAFVPPQHFIRL  284 (288)
Q Consensus       239 fp~L~~~i~~~i~~~L~~~~~~a~~~v~~li~~E~~~Intnh~~~~  284 (288)
                      ||+|++++.+++.+.|++++.+|+++|..|||||.+||||||+..+
T Consensus       469 fP~Lr~ei~~iv~~~Lre~~~~t~~~V~~LId~E~ayintnHpdf~  514 (772)
T 3zvr_A          469 YPRLREEMERIVTTHIREREGRTKEQVMLLIDIELAYMNTNHEDFI  514 (772)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCTTCTTCC
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCChhhh
Confidence            9999999999999999999999999999999999999999996653

>3ljb_A Interferon-induced GTP-binding protein MX1; four-helix-bundle, antiviral protein; 2.40A {Homo sapiens}

Probab=99.96  E-value=4.9e-29  Score=223.57  Aligned_cols=167  Identities=10%  Similarity=0.094  Sum_probs=131.3

Q ss_pred             CHhHHHHHHHHHHHHHHHHHHHhhccCC---CCcchhHhhhhcchhhhhccCCCCCccCh----hhHHHHHHHhcCCCCC
Q 044156          109 SVEGTRSLSLELCREFEDKFLQLITTGE---GSGWKIVASFEGNFPNRIKQLPLDRRFDI----NNVQRIVLEADGYQPY  181 (288)
Q Consensus       109 ~~~~~~~~ll~~i~~F~~~~~~~l~G~~---~ggari~~~f~~~F~~~i~~~~~~~~~~~----~~I~~~i~~~~G~~~~  181 (288)
                      +++++..||++.|+.|.+++.+++.|..   .|+.||+..++..|.+|...++.......    ++|.+..++++|+++|
T Consensus         2 ~~~e~~~FLidkI~~F~~di~~l~~Gee~~~~~~~rlf~~lr~eF~~w~~~l~~~~~~~~~~i~~ev~~~e~~~rGrELP   81 (271)
T 3ljb_A            2 DENEKMFFLIDKVNAFNQDITALMQGEETVGEEDIRLFTRLRHEFHKWSTIIENNFQEGHKILSRKIQKFENQYRGRELP   81 (271)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCTTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC--------
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHhCceecccCCcchHHHHHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHccCcccC
Confidence            3567899999999999999999999998   45689999999999999988743222222    5778888899999999


Q ss_pred             CCCCHHHHHHHHHHHHHhhhchHHHHHHhhhhhhhHHHHHHHHHHHHHhccCCCCCCChhHHHHHHHHHHHHHHHhHHHH
Q 044156          182 LISPEKGLRSLIKGVLELAKEPSRLSVDEVIEPLKHVHRVLVGMVSAAANATPGLGRYPLFKREVVAIASAALDGFKNEA  261 (288)
Q Consensus       182 ~fvp~~afe~li~~~i~~l~~Ps~~~v~~v~~~l~~V~~~l~~~v~~~~~~~~~~~~fp~L~~~i~~~i~~~L~~~~~~a  261 (288)
                      +|+|+.+|+.+|++||++|++||++|++.       |++++.+++.+++.  .+|++||+|++.+.+++.+++.++..+|
T Consensus        82 gFv~y~aFE~lVk~qI~~LeePAl~cl~~-------V~e~l~~~~~~i~~--~~F~rFpnL~~~i~~~i~~i~~~~~~~A  152 (271)
T 3ljb_A           82 GFVNYRTFETIVKQQIKALEEPAVDMLHT-------VTDMVRLAFTDVSI--KNFEEFFNLHRTAKSKIEDIRAEQEREG  152 (271)
T ss_dssp             -CTTHHHHHHHHHHHHHTTHHHHHHHHHH-------HHHHHHHHHHHHHH--HHHTTSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCChHHHHHHHHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHH--HHHhhhHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999       55556666666665  5899999999999999999999999999


Q ss_pred             HHHHHHHHHHhhcCCCchhhhhhh
Q 044156          262 RKMVVALVDMERAFVPPQHFIRLV  285 (288)
Q Consensus       262 ~~~v~~li~~E~~~Intnh~~~~~  285 (288)
                      .++|+++|+||+ +|.|+|-.|+.
T Consensus       153 e~~I~~~~~mE~-~vytqD~~Y~~  175 (271)
T 3ljb_A          153 EKLIRLHFQMEQ-IVYCQDQVYRG  175 (271)
T ss_dssp             HHHHHHHHHHHT-SCC--------
T ss_pred             HHHHHHHHHHhc-ccccCCHHHHH
Confidence            999999999999 77788866643

>3t34_A Dynamin-related protein 1A, linker, dynamin-relat 1A; dynamin-like protein 1A, GTPase, membrane fission, motor Pro; HET: GDP; 2.40A {Arabidopsis thaliana} PDB: 3t35_A*

Probab=99.71  E-value=2.7e-18  Score=160.06  Aligned_cols=101  Identities=20%  Similarity=0.354  Sum_probs=83.7

Q ss_pred             CCcccCCCeEEEecCCcchhhhccCCcccHHHHHHHHHHHhccCC-CCCCCCCcchHHHHHHHHHHHHHHhhccchhHHH
Q 044156            8 SPKTADIPWVALIGQSVSIATTQSGSEISLETAWTAESESLKSIL-IGAPQSQLGRIALADDLAQLIRKRMKVRVPNLLS   86 (288)
Q Consensus         8 ~~~~L~lG~~~V~nr~q~~~~~di~~~~s~~~a~~~E~~FF~~~p-~~~~~~~~G~~~L~~~L~~lL~~hI~~~LP~l~~   86 (288)
                      ...++++||++|.|+|+    .++++..++.+++..|..||.+|| |+.+.+++|+++|+.+|+.+|.+||+++||.|+.
T Consensus       229 ~~~~~~~~~~~v~~~s~----~~i~~~~~~~~~~~~e~~ff~~~~~~~~~~~~~g~~~L~~~l~~~l~~~i~~~lp~l~~  304 (360)
T 3t34_A          229 RSFKLKYPWVGVVNRSQ----ADINKNVDMIAARKREREYFSNTTEYRHLANKMGSEHLAKMLSKHLERVIKSRIPGIQS  304 (360)
T ss_dssp             SSSCCSSCCEEECCCCH----HHHHTTCCHHHHHHHHHHHHTTCTTTGGGGGGCSHHHHHHHHHHHHHHHHHTTCTTHHH
T ss_pred             ccccccCCeEEEEECCh----HHhccCCCHHHHHHHHHHHhcCCCccccchhhcCHHHHHHHHHHHHHHHHHHHhHHHHH
Confidence            45789999999999999    999999999999999999999998 7888889999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHhCCCCCCCHhH
Q 044156           87 GLQGKSQIVQDELVRLGEQMVQSVEG  112 (288)
Q Consensus        87 ~I~~~l~~~~~eL~~lg~~~~~~~~~  112 (288)
                      +|+.++.+++++|.+||+++++++++
T Consensus       305 ~i~~~l~~~~~~l~~lg~~~~~~~~~  330 (360)
T 3t34_A          305 LINKTVLELETELSRLGKPIAHGTDS  330 (360)
T ss_dssp             HHHHHHTTTTCC--------------
T ss_pred             HHHHHHHHHHHHHHHcCCCCCCCHHH
Confidence            99999999999999999999876643

>2x2e_A Dynamin-1; nitration, hydrolase, membrane fission, nucleotide-binding, endocytosis, motor protein; HET: GDP; 2.00A {Homo sapiens} PDB: 2x2f_A* 3zyc_A* 3zys_A

Probab=99.62  E-value=7e-16  Score=143.51  Aligned_cols=120  Identities=13%  Similarity=0.135  Sum_probs=110.1

Q ss_pred             CCCcccCCCeEEEecCCcchhhhccCCcccHHHHHHHHHHHhccCC-CCCCCCCcchHHHHHHHHHHHHHHhhccchhHH
Q 044156            7 GSPKTADIPWVALIGQSVSIATTQSGSEISLETAWTAESESLKSIL-IGAPQSQLGRIALADDLAQLIRKRMKVRVPNLL   85 (288)
Q Consensus         7 g~~~~L~lG~~~V~nr~q~~~~~di~~~~s~~~a~~~E~~FF~~~p-~~~~~~~~G~~~L~~~L~~lL~~hI~~~LP~l~   85 (288)
                      +...++++||+.|+++|+    .+...-.++.+++..|..||.++| |++...++|+..|++.|++.|..||+++||.|+
T Consensus       222 ~~~~~l~~~~~~v~~~SA----~~~~~i~~l~~~l~~e~~~f~~~~~~~~~~~r~~~~~l~~~l~e~l~~~i~~~lP~l~  297 (353)
T 2x2e_A          222 NKLLPLRRGYIGVVNRSQ----KDIDGKKDITAALAAERKFFLSHPSYRHLADRMGTPYLQKVLNQQLTNHIRDTLPGLR  297 (353)
T ss_dssp             TCSSCCTTCEEECCCCCH----HHHHTTCCHHHHHHHHHHHHHHCTTTGGGGGGCSHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCcccccCCceEEEeCCc----ccccccccHHHHHHHHHHHhccCCcccccHHhhCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            345788899999999999    888777889999999999999997 998889999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHhCCCCCCCHhHHH--HHHHHHHHHHHHHHHH
Q 044156           86 SGLQGKSQIVQDELVRLGEQMVQSVEGTR--SLSLELCREFEDKFLQ  130 (288)
Q Consensus        86 ~~I~~~l~~~~~eL~~lg~~~~~~~~~~~--~~ll~~i~~F~~~~~~  130 (288)
                      .+|+.++..++.+|.+||++++++++++.  .+|++++++|++.|+.
T Consensus       298 ~~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~  344 (353)
T 2x2e_A          298 NKLQSQLLSIEKEVEEYKNFRPDKHGTDSRVDEMLRMYHALKEALSI  344 (353)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHCCCSSSCCHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHccCCCCCchhhhhHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999998887776555  9999999999999964

>1jwy_B Dynamin A GTPase domain; dynamin, GTPase, GDP, myosin, fusion-protein, hydrolase; HET: BGC ADP GDP; 2.30A {Dictyostelium discoideum} SCOP: c.37.1.8 PDB: 1jx2_B*

Probab=98.63  E-value=3.5e-08  Score=89.11  Aligned_cols=89  Identities=17%  Similarity=0.179  Sum_probs=74.5

Q ss_pred             cccCCCeEEEecCCcchhhhccCCcccHHHHHHHHHHHhccCC-CCCCCCCcchHHHHHHHHHHHHHHhhccchhHHHHH
Q 044156           10 KTADIPWVALIGQSVSIATTQSGSEISLETAWTAESESLKSIL-IGAPQSQLGRIALADDLAQLIRKRMKVRVPNLLSGL   88 (288)
Q Consensus        10 ~~L~lG~~~V~nr~q~~~~~di~~~~s~~~a~~~E~~FF~~~p-~~~~~~~~G~~~L~~~L~~lL~~hI~~~LP~l~~~I   88 (288)
                      .++++||+.|.+.|.    .+++.+..+.+.+..+.+||..+| |..+..++|+..|...|...|..||+++||.++.+|
T Consensus       226 ~~~~~~~~~v~~~sa----~~~~~~~gv~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~lre~l~~~~~~elP~~~~~i  301 (315)
T 1jwy_B          226 IPLTLGFIGVINRSQ----EDIIAKKSIRESLKSEILYFKNHPIYKSIANRSGTAYLSKTLNKLLMFHIRDTLPDLKVKV  301 (315)
T ss_dssp             SCCTTCEEECCCCCH----HHHSSSCCHHHHHHHHHHHHHTCTTGGGSGGGCSHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ccCCCCeEEEecCCh----hhhccCCCHHHHHHHHHHHHhCCCccccchhccCHHHHHHHHHHHHHHHHHHHhHHHHHHH
Confidence            456689999999999    888889999999999999999887 777778999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHh
Q 044156           89 QGKSQIVQDELVRL  102 (288)
Q Consensus        89 ~~~l~~~~~eL~~l  102 (288)
                      +..|.+++++|.+|
T Consensus       302 ~~~l~~~~~~l~~~  315 (315)
T 1jwy_B          302 SKMLSDVQGELSTY  315 (315)
T ss_dssp             HHHTC---------
T ss_pred             HHHHHHHHHHHHhC
Confidence            99999999999875

>2aka_B Dynamin-1; fusion protein, GTPase domain, myosin, contractIle protein; 1.90A {Rattus norvegicus} SCOP: c.37.1.8 PDB: 3l43_A*

Probab=98.21  E-value=2.1e-06  Score=76.63  Aligned_cols=79  Identities=16%  Similarity=0.196  Sum_probs=69.9

Q ss_pred             cccCCCeEEEecCCcchhhhccCCcccHHHHHHHHHHHhccCC-CCCCCCCcchHHHHHHHHHHHHHHhhccchhHHHHH
Q 044156           10 KTADIPWVALIGQSVSIATTQSGSEISLETAWTAESESLKSIL-IGAPQSQLGRIALADDLAQLIRKRMKVRVPNLLSGL   88 (288)
Q Consensus        10 ~~L~lG~~~V~nr~q~~~~~di~~~~s~~~a~~~E~~FF~~~p-~~~~~~~~G~~~L~~~L~~lL~~hI~~~LP~l~~~I   88 (288)
                      .++++||+.|.+.|.    .+-..-..+.+++..|..||..++ |.+...++||..|.+.|++.|..|++++||.++.+|
T Consensus       220 ~~~~~~~~~v~~~SA----~~~~gi~~l~~~l~~~~~~~~~~~~~~~~~~r~~~~~l~~~l~~~l~~~~~~~lP~~~~~i  295 (299)
T 2aka_B          220 LPLRRGYIGVVNRSQ----KDIDGKKDITAALAAERKFFLSHPSYRHLADRMGTPYLQKVLNQQLTNHIRDTLPGLRNKL  295 (299)
T ss_dssp             SCCTTCEEECCCCCC----BCTTSCBCHHHHHHHHHHHHHHCTTTGGGGGGCSHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CcCCCCcEEEECCCh----hhccccccHHHHHHHHHHHHhcCCccccchhhhCHHHHHHHHHHHHHHHHHHHhHHHHHHH
Confidence            467779999999998    776556778899999999997775 888888999999999999999999999999999999


Q ss_pred             HHHH
Q 044156           89 QGKS   92 (288)
Q Consensus        89 ~~~l   92 (288)
                      +.+|
T Consensus       296 ~~~~  299 (299)
T 2aka_B          296 QSQL  299 (299)
T ss_dssp             HHHC
T ss_pred             HhhC
Confidence            8764

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	288
d1jwyb_	306	Dynamin G domain {Dictyostelium discoideum [TaxId:	99.28
d2akab1	299	Dynamin G domain {Rat (Rattus norvegicus) [TaxId:	99.25

>d1jwyb_ c.37.1.8 (B:) Dynamin G domain {Dictyostelium discoideum [TaxId: 44689]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: G proteins
domain: Dynamin G domain
species: Dictyostelium discoideum [TaxId: 44689]

Probab=99.28  E-value=1.8e-12  Score=115.52  Aligned_cols=82  Identities=15%  Similarity=0.176  Sum_probs=77.3

Q ss_pred             CCCcccCCCeEEEecCCcchhhhccCCcccHHHHHHHHHHHhccCC-CCCCCCCcchHHHHHHHHHHHHHHhhccchhHH
Q 044156            7 GSPKTADIPWVALIGQSVSIATTQSGSEISLETAWTAESESLKSIL-IGAPQSQLGRIALADDLAQLIRKRMKVRVPNLL   85 (288)
Q Consensus         7 g~~~~L~lG~~~V~nr~q~~~~~di~~~~s~~~a~~~E~~FF~~~p-~~~~~~~~G~~~L~~~L~~lL~~hI~~~LP~l~   85 (288)
                      |...++.+||++++|+++    .++..+.++.++.+.|..||.++| |+.+.+++|+.+|+.+|+++|.+||+++||.|+
T Consensus       223 ~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~E~~~f~~~~~~~~l~~r~Gi~~L~~~L~~~L~~~i~~~lP~i~  298 (306)
T d1jwyb_         223 GRVIPLTLGFIGVINRSQ----EDIIAKKSIRESLKSEILYFKNHPIYKSIANRSGTAYLSKTLNKLLMFHIRDTLPDLK  298 (306)
T ss_dssp             TSSSCCTTCEEECCCCCH----HHHSSSCCHHHHHHHHHHHHHTCTTGGGSGGGCSHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCcccccCCceeeecCch----hhccccCCHHHHHHHHHHHHhCCchhcchHHHhhHHHHHHHHHHHHHHHHHHHhHHHH
Confidence            456889999999999999    999999999999999999999998 677889999999999999999999999999999


Q ss_pred             HHHHHHH
Q 044156           86 SGLQGKS   92 (288)
Q Consensus        86 ~~I~~~l   92 (288)
                      .+|+++|
T Consensus       299 ~~i~~~L  305 (306)
T d1jwyb_         299 VKVSKML  305 (306)
T ss_dssp             HHHHHHT
T ss_pred             HHHHHhh
Confidence            9999886

>d2akab1 c.37.1.8 (B:6-304) Dynamin G domain {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: G proteins
domain: Dynamin G domain
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.25  E-value=3.5e-12  Score=113.08  Aligned_cols=83  Identities=16%  Similarity=0.186  Sum_probs=77.2

Q ss_pred             CCCCcccCCCeEEEecCCcchhhhccCCcccHHHHHHHHHHHhccCC-CCCCCCCcchHHHHHHHHHHHHHHhhccchhH
Q 044156            6 QGSPKTADIPWVALIGQSVSIATTQSGSEISLETAWTAESESLKSIL-IGAPQSQLGRIALADDLAQLIRKRMKVRVPNL   84 (288)
Q Consensus         6 ~g~~~~L~lG~~~V~nr~q~~~~~di~~~~s~~~a~~~E~~FF~~~p-~~~~~~~~G~~~L~~~L~~lL~~hI~~~LP~l   84 (288)
                      ++...++.+||++|+|+++    .+...+.+..+++..|++||.+++ |+.+.+++|+.+|+++|+.+|.+||+++||.|
T Consensus       216 ~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~E~~~f~~~~~~~~l~~~~gi~~L~~~L~~~L~~~i~~~lp~i  291 (299)
T d2akab1         216 ENKLLPLRRGYIGVVNRSQ----KDIDGKKDITAALAAERKFFLSHPSYRHLADRMGTPYLQKVLNQQLTNHIRDTLPGL  291 (299)
T ss_dssp             TTCSSCCTTCEEECCCCCC----BCTTSCBCHHHHHHHHHHHHHHCTTTGGGGGGCSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             hcccccccCCeeeeecCcc----ccccccCCHHHHHHHHHHHHhcCccccchHHhhCHHHHHHHHHHHHHHHHHHHHHHH
Confidence            3556889999999999999    899999999999999999999997 78888999999999999999999999999999


Q ss_pred             HHHHHHHH
Q 044156           85 LSGLQGKS   92 (288)
Q Consensus        85 ~~~I~~~l   92 (288)
                      +.+|+++|
T Consensus       292 ~~~i~~~L  299 (299)
T d2akab1         292 RNKLQSQL  299 (299)
T ss_dssp             HHHHHHHC
T ss_pred             HHHHHhhC
Confidence            99998864