Citrus Sinensis ID: 044183

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------42
Protein Sequence
MDFKLRISYFTPTIITYLLLITTPPILALNITDLLLPYPDLSAFSALISSTSSAVAADLSHRSSITFLAVPNSYLNSPSSLDFTRRLSPSSLADLLRYHVLLQYLSWADLRKIPSSGILVTTLFQTTGRASSNFGSVNISRNPATNAIAIHSPAPYSASNATVLTLIKTLPYNITILSINSLLVPYGFDLMASETRPPLGLNITKALIDGHNFNVAASMLAASGVVEEFEADEGGAGITLFVPTDLAFADLPNNVKLQSLPADKKAVVLKFHVLHSYYPLGSLESIVNPVQPTLATEDMGAGRFTLNISRVNGSVAIDTGLVQASVTQTVFDQNPLAIFGVSKVLLPREIFGKDRNARPPGVSPSPEKSPGLGGPSSHLTSPPGFREDMRSNADGLQLQWRSYVVAAALCCIGLLYVLV
Secondary Structure (PSIPRED)
ccccccHHHHHHHHHHHHHHHcccccccccHHHHHcccccHHHHHHHHHHccHHHHHHHcccccEEEEEcccccccccccccccccccHHHHHHHHHHccccccccccccccccccccEEEEcccccccccccccEEEEEEcccccEEEEcccccccccccEEEEEEEEccccEEEEEEEccccccccccccccccccccccHHHHHHccccHHHHHHHHHHccHHHHHHHccccccEEEEccccHHHHccccccccccccHHHHHHHHHHHHHccccccccccccccccccccccccccccEEEEEEEEEccEEEEEccccccEEEEEEEccccEEEEEEcccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHc
Secondary Structure Prediction (SSPRO)
ccEEEEEcHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHccccHHHHHccccEEEEEEEcccHHHHHccccccccccHHHHHHHHHHHHHHHHccHHHHHccccccEEEEEHEHcccccccccEEEEEEEcccccEEEEEccccccccccEEEEEEEEcccEEEEEEEcccccccccccccccccccccccHHHHHHHccccHHHHHHHHccccHHHHEcccccccEEEEccccHHHHHccccccHccccHHHHHHHHHHHcccccccHHHcccccccccccccccccccccEEEEEEEcccEEEEEccEEEEEEEcEEEccccEEEEEEccEEccHHHcccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHc
Coil and Loop (DISEMBL)
mdfklrisyftPTIITYLLLIttppilalnitdlllpypdlsafSALISSTSSAVAadlshrssitflavpnsylnspssldftrrlspssLADLLRYHVLLQYLSwadlrkipssgilVTTLFQttgrassnfgsvnisrnpatnaiaihspapysasnATVLTLIKTLPYNITILSINSllvpygfdlmasetrpplglniTKALIDGHNFNVAASMLAASgvveefeadeggagitlfvptdlafadlpnnvklqslpadkkAVVLKFHVLHsyyplgslesivnpvqptlatedmgagrFTLNISRVNGSVAIDTGLVQASVTqtvfdqnplaifgvskvllpreifgkdrnarppgvspspekspglggpsshltsppgfredmrsnadglqLQWRSYVVAAALCCIGLLYVLV
Flexible Loop (DISEMBL)
MDFKLRISYFTPTIITYLLLITTPPILALNITDLLLPYPDLSAFSALISSTSSAVAADLSHRSSITFLAVPNSYLNSPSSLDFTRRLSPSSLADLLRYHVLLQYLSWADLRKIPSSGILVTTLFQTTGRASSNFGSVNISRNPATNAIAIHSPAPYSASNATVLTLIKTLPYNITILSINSLLVPYGFDLMASETRPPLGLNITKALIDGHNFNVAASMLAASGVVEEFEADEGGAGITLFVPTDLAFADLPNNVKLQSLPADKKAVVLKFHVLHSYYPLGSLESIVNPVQPTLATEDMGAGRFTLNISRVNGSVAIDTGLVQASVTQTVFDQNPLAIFGVSKVLLPREIFgkdrnarppgvspspekspglggpSSHLTSPPGFREDMRSNADGLQLQWRSYVVAAALCCIGLLYVLV
Low Complexity Region (SEG)
MDFKLRISYFtptiitylllittppilalnitDLLLPYPDLsafsalisstssavaaDLSHRSSITFLAVPNSYLNSPSSLDFTRRLSPSSLADLLRYHVLLQYLSWADLRKIPSSGILVTTLFQTTGRASSNFGSVNISRNPATNAIAIHSPAPYSASNATVLTLIKTLPYNITILSINSLLVPYGFDLMASETRPPLGLNITKALIDGHNFNVAASMLAASGVVEEFEADEGGAGITLFVPTDLAFADLPNNVKLQSLPADKKAVVLKFHVLHSYYPLGSLESIVNPVQPTLATEDMGAGRFTLNISRVNGSVAIDTGLVQASVTQTVFDQNPLAIFGVSKVLLPREIFGKDRNARPPGVSPSPEKSPGLGGPSSHLTSPPGFREDMRSNADGLQLQWRSYVVAAALCCIGLLYVLV
Disordered region (IsUnstruct)
***KLRISYFTPTIITYLLLITTPPILALNITDLLLPYPDLSAF********************ITFLAVPNSYL**************SSLADLLRYHVLLQYLSWADLRKIPSSGILVTTLFQTTGRASSNFGSVNISRNPATNAIAIHSPAPYSASNATVLTLIKTLPYNITILSINSLLVPYGFDLMASETRPPLGLNITKALIDGHNFNVAASMLAASGVVEEFEADEGGAGITLFVPTDLAFADLPNNVKLQSLPADKKAVVLKFHVLHSYYPLGSLESIVNPVQPTLATEDMGAGRFTLNISRVNGSVAIDTGLVQASVTQTVFDQNPLAIFGVSKVLLPREIF*******************************************GLQLQWRSYVVAAALCCIGLLYVL*
Disordered Region (DISOPRED)
*********FTPTIITYLLLITTPPILALNITDLLLPYPDLSAFSALISSTSSAVAADLSHRSSITFLAVPNSYLNSPSSLDFTRRLSPSSLADLLRYHVLLQYLSWADLRKIPSSGILVTTLFQTTGRASSNFGSVNISRNPATNAIAIHSPAPYSASNATVLTLIKTLPYNITILSINSLLVPYGFDLMASETRPPLGLNITKALIDGHNFNVAASMLAASGVVEEFEADEGGAGITLFVPTDLAFADLPNNVKLQSLPADKKAVVLKFHVLHSYYPLGSLES*************MGAGRFTLNISRVNGSVAIDTGLVQASVTQTVFDQNPLAIFGVSKVLLPRE**************************************************WRSYVVAAALCCIGLLYVLV
Disordered Region (DISEMBL)
MDFKLRISYFTPTIITYLLLITTPPILALNITDLLLPYPDLSAFSALIS********DLSHRSSITFLAVPNSYLNSPSSLDFTRRLSPSSLADLLRYHVLLQYLSWADLRKIPSSGILVTTLFQTTGRASSNFGSVNISRNPATNAIAIHSPAPYSASNATVLTLIKTLPYNITILSINSLLVPYGFDLMASETRPPLGLNITKALIDGHNFNVAASMLAASGVVEEFEADEGGAGITLFVPTDLAFADLPNNVKLQSLPADKKAVVLKFHVLHSYYPLGSLESIVNPVQPTLATEDMGAGRFTLNISRVNGSVAIDTGLVQASVTQTVFDQNPLAIFGVSKVLLPREIFGKDRN************************SPPGFREDMRSNADGLQLQWRSYVVAAALCCIGLLYVLV
Disordered Region (DISPRO)
*DFKLRISYFTPTIITYLLLITTPPILALNITDLLLPYPDLSAFSALISSTSSAVAADLSHRSSITFLAVPNSYLNSPSSLDFTRRLSPSSLADLLRYHVLLQYLSWADLRKIPSSGILVTTLFQTTGRASSNFGSVNISRNPATNAIAIHSPAPYSASNATVLTLIKTLPYNITILSINSLLVPYGFDLM*S***PPLGLNITKALIDGHNFNVAASMLAASGVVEEFEADEGGAGITLFVPTDLAFADLPNNVKLQSLPADKKAVVLKFHVLHSYYPLGSLESIVNPVQPTLATEDMGAGRFTLNISRVNGSVAIDTGLVQASVTQTVFDQNPLAIFGVSKVLLPREIFGKD******************************************QLQWRSYVVAAALCCIGLLYVLV
Transmembrane Helix (TMHMM)
iiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHi
Transmembrane Helix (HMMTOP)
iiiiiiHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHo
Transmembrane Helix (MEMSAT)
oooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoo
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooo
TM Helix, Signal Peptide (Phobius)
iiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MDFKLRISYFTPTIITYLLLITTPPILALNITDLLLPYPDLSAFSALISSTSSAVAADLSHRSSITFLAVPNSYLNSPSSLDFTRRLSPSSLADLLRYHVLLQYLSWADLRKIPSSGILVTTLFQTTGRASSNFGSVNISRNPATNAIAIHSPAPYSASNATVLTLIKTLPYNITILSINSLLVPYGFDLMASETRPPLGLNITKALIDGHNFNVAASMLAASGVVEEFEADEGGAGITLFVPTDLAFADLPNNVKLQSLPADKKAVVLKFHVLHSYYPLGSLESIVNPVQPTLATEDMGAGRFTLNISRVNGSVAIDTGLVQASVTQTVFDQNPLAIFGVSKVLLPREIFGKDRNARPPGVSPSPEKSPGLGGPSSHLTSPPGFREDMRSNADGLQLQWRSYVVAAALCCIGLLYVLV
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	419	2.2.26 [Sep-21-2011]
Q9SNC3	420	Fasciclin-like arabinogal	yes	no	0.890	0.888	0.563	1e-111
O22126	420	Fasciclin-like arabinogal	no	no	0.768	0.766	0.321	2e-31
Q9LZX4	422	Fasciclin-like arabinogal	no	no	0.821	0.815	0.317	4e-27
Q9FM65	424	Fasciclin-like arabinogal	no	no	0.725	0.716	0.325	1e-26
Q9SU13	403	Fasciclin-like arabinogal	no	no	0.725	0.754	0.318	1e-25
Q8LEE9	249	Fasciclin-like arabinogal	no	no	0.350	0.590	0.309	2e-14
Q9SJ81	254	Fasciclin-like arabinogal	no	no	0.350	0.578	0.329	2e-14
Q9FFH6	247	Fasciclin-like arabinogal	no	no	0.434	0.736	0.288	8e-14
Q9SIL7	247	Fasciclin-like arabinogal	no	no	0.496	0.842	0.273	9e-14
Q9ZWA8	247	Fasciclin-like arabinogal	no	no	0.393	0.668	0.300	2e-13

>sp|Q9SNC3|FLA4_ARATH Fasciclin-like arabinogalactan protein 4 OS=Arabidopsis thaliana GN=FLA4 PE=1 SV=1

 Score =  403 bits (1036), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 231/410 (56%), Positives = 292/410 (71%), Gaps = 37/410 (9%)

Query: 29  LNITDLLLPYPDLSAFSALISSTSSAVAADLSHRSSITFLAVPNSYLNSPSSLDFTRRLS 88
           +N+T +L  +P+LS+FS L+   SS +AA+LS R+S+T LAVPNS  +S +SLD TRRL 
Sbjct: 29  INVTAVLSSFPNLSSFSNLL--VSSGIAAELSGRNSLTLLAVPNSQFSS-ASLDLTRRLP 85

Query: 89  PSSLADLLRYHVLLQYLSWADLRKIPSSGILVTTLFQTTGRASSNFGSVNISRNPATNAI 148
           PS+LADLLR+HVLLQ+LS +DLR+IP SG  VTTL++ +GR     GSVN++R+PA+ ++
Sbjct: 86  PSALADLLRFHVLLQFLSDSDLRRIPPSGSAVTTLYEASGRTFFGSGSVNVTRDPASGSV 145

Query: 149 AIHSPAPYSASNATVLTLIKTLPYNITILSINSLLVPYGFDLMASETR-----------P 197
            I SPA     N TVL L++T P NIT+L+++SL+VP G D+ ASET            P
Sbjct: 146 TIGSPA---TKNVTVLKLLETKPPNITVLTVDSLIVPTGIDITASETLTPPPTSTSLSPP 202

Query: 198 PLGLNITKALIDGHNFNVAASMLAASGVVEEFEADEGGAGITLFVPTDLAFADLPNNVKL 257
           P G+N+T+ LI+GHNFNVA S+L ASGV+ EFE DE GAGIT+FVPTD AF+DLP+NV L
Sbjct: 203 PAGINLTQILINGHNFNVALSLLVASGVITEFENDERGAGITVFVPTDSAFSDLPSNVNL 262

Query: 258 QSLPADKKAVVLKFHVLHSYYPLGSLESIVNPVQPTLATEDMGAGRFTLNISRVNGS-VA 316
           QSLPA++KA VLKFHVLHSYY LGSLESI NPVQPTLATE+MGAG +TLNISRVNGS V 
Sbjct: 263 QSLPAEQKAFVLKFHVLHSYYTLGSLESITNPVQPTLATEEMGAGSYTLNISRVNGSIVT 322

Query: 317 IDTGLVQASVTQTVFDQNPLAIFGVSKVLLPREIFGKDRNARPPGVSPSPEKS---PGLG 373
           I++G+V A VTQT FDQNP+++FGVSKVLLP+E+F K  + +P   +P  E S       
Sbjct: 323 INSGVVLAVVTQTAFDQNPVSVFGVSKVLLPKELFPK--SGQPVATAPPQEISLSPESSS 380

Query: 374 GPSSHLTSPPGFREDMRSNAD----GLQLQWRSYVVAAALCCIGLLYVLV 419
              S L SPP  RE + S A     G  + W          CI   YVLV
Sbjct: 381 EQPSRLVSPP--REIVSSGAVKRPLGFLVLW--------CWCIAFCYVLV 420

May be a cell surface adhesion protein that is required for normal cell expansion.
Arabidopsis thaliana (taxid: 3702)

>sp|O22126|FLA8_ARATH Fasciclin-like arabinogalactan protein 8 OS=Arabidopsis thaliana GN=FLA8 PE=1 SV=1

 Score =  136 bits (343), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 110/342 (32%), Positives = 176/342 (51%), Gaps = 20/342 (5%)

Query: 16  TYLLLITTPPILALNITDLLLPYPDLSAFSALISSTSSAVAADLSHRSSITFLAVPNSYL 75
           T+ LL     + + NIT +L   PD S+F++ +S T   +A +++ R++IT L + N  +
Sbjct: 13  TFSLLAFASTVSSHNITQILADSPDYSSFNSYLSQTK--LADEINSRTTITVLVLNNGAM 70

Query: 76  NSPSSLDFTRRLSPSSLADLLRYHVLLQYLSWADLRKIPSSGILVTTLFQTTGRASSNFG 135
           ++        +   S +   L   VLL Y     L KI     L TTL+QTTG A  N G
Sbjct: 71  SA-----LAGKHPLSVIKSALSLLVLLDYYDPQKLHKISKGTTLSTTLYQTTGNAPGNLG 125

Query: 136 SVNISRNPATNAIAIHSPAPYSASNATVLTLIKTLPYNITILSINSLLVPYGFDLMASET 195
            VNI+ +     +   S A  S  +++    +K +PYNI+IL I++ ++  G   + +  
Sbjct: 126 FVNIT-DLKGGKVGFGSAASGSKLDSSYTKSVKQIPYNISILEIDAPIIAPG---VLTAP 181

Query: 196 RPPLGLNITKALIDGHNFNVAASMLAASGVVEEFEADEGGAGITLFVPTDLAFA--DLPN 253
            P   L+    L++       A++L +SGV++ +E+     G+T+F P+D AF    +P+
Sbjct: 182 APSASLSNITGLLEKAGCKTFANLLVSSGVLKTYES-AVEKGLTVFAPSDEAFKAEGVPD 240

Query: 254 NVKLQSLPADKKAVVLKFHVLHSYYPLGSLESIVNPVQPTLATEDMGAGRFTLNISRVNG 313
              L  L   +   +L++H L  Y P GSL++  N +  TLAT   GAG+F L  S    
Sbjct: 241 ---LTKLTQAEVVSLLEYHALAEYKPKGSLKTNKNNIS-TLATN--GAGKFDLTTSTSGD 294

Query: 314 SVAIDTGLVQASVTQTVFDQNPLAIFGVSKVLLPREIFGKDR 355
            V + TG+  + +  TV D  P+ IF V  VLLP E+FGK +
Sbjct: 295 EVILHTGVAPSRLADTVLDATPVVIFTVDNVLLPAELFGKSK 336

May be a cell surface adhesion protein.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9LZX4|FLA10_ARATH Fasciclin-like arabinogalactan protein 10 OS=Arabidopsis thaliana GN=FLA10 PE=1 SV=1

 Score =  122 bits (307), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 117/368 (31%), Positives = 189/368 (51%), Gaps = 24/368 (6%)

Query: 10  FTPTIITYLLLITTPPILALNITDLLLPYPDLSAFSALISSTSSAVAADLSHRSSITFLA 69
           FT    T  LL     +   NIT +L   P+ S+F+  +S T   +A +++ R++IT L 
Sbjct: 7   FTLFAFTLSLLTVASTVSGHNITQILSDTPEYSSFNNYLSQTK--LADEINSRTTITVLV 64

Query: 70  VPNSYLNSPSSLDFTRRLSPSSLADLLRYHVLLQYLSWADLRKIPSSGILVTTLFQTTGR 129
           + N  +   SSL     LS   + + L   VLL Y     L ++     L TTL+QTTG 
Sbjct: 65  LNNGAM---SSLAGKHPLS--VVKNALSLLVLLDYYDPLKLHQLSKGTTLTTTLYQTTGH 119

Query: 130 ASSNFGSVNISRNPATNAIAIHSPAPYSASNATVLTLIKTLPYNITILSINSLLVPYGFD 189
           A  N G VN++ +     +   S AP S  +++    +K +PYNI++L IN+ ++  G  
Sbjct: 120 ALGNLGFVNVT-DLKGGKVGFGSAAPGSKLDSSYTKSVKQIPYNISVLEINAPIIAPG-- 176

Query: 190 LMASETRPPLGLNITKALIDGHNFNVAASMLAASGVVEEFEADEGGAGITLFVPTDLAFA 249
           ++ +      G++    L++       A++L +SGV++ FE+     G+T+F P+D AF 
Sbjct: 177 ILTAPAPSSAGVSNITGLLEKAGCKTFANLLVSSGVIKTFESTVE-KGLTVFAPSDEAFK 235

Query: 250 --DLPNNVKLQSLPADKKAVVLKFHVLHSYYPLGSLESIVNPVQPTLATEDMGAGRFTLN 307
              +P+   L +L   +   +L++H L  Y P GSL++  + +  TLAT   GAG++ L 
Sbjct: 236 ARGVPD---LTNLTQAEVVSLLEYHALAEYKPKGSLKTNKDAIS-TLATN--GAGKYDLT 289

Query: 308 ISRVNGSVAIDTGLVQASVTQTVFDQNPLAIFGVSKVLLPREIFGKDRNARPP-----GV 362
            S     V + TG+  + +  TV D+ P+ IF V  VLLP E+FGK  +  P        
Sbjct: 290 TSTSGDEVILHTGVGPSRLADTVVDETPVVIFTVDNVLLPAELFGKSSSPAPAPEPVSAP 349

Query: 363 SPSPEKSP 370
           +P+P KSP
Sbjct: 350 TPTPAKSP 357

May be a cell surface adhesion protein.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9FM65|FLA1_ARATH Fasciclin-like arabinogalactan protein 1 OS=Arabidopsis thaliana GN=FLA1 PE=1 SV=1

 Score =  120 bits (302), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 106/326 (32%), Positives = 166/326 (50%), Gaps = 22/326 (6%)

Query: 28  ALNITDLLLPYPDLSAFSALISSTSSAVAADLSHRSSITFLAVPNSYLNSPSSLDFTRRL 87
           A N+T LL  +P  S+FS  ++ T   +A +++ R +IT  AV N+ +++ +S  +T   
Sbjct: 24  AHNVTRLLANHPSFSSFSHFLTQTH--LADEINRRRTITVCAVDNAAMSALTSKGYTL-- 79

Query: 88  SPSSLADLLRYHVLLQYLSWADLRKIPSSGILVTTLFQTTGRASSNFGSVNISRNPATNA 147
             S+L ++L  HVLL Y     L +I     L  TLFQ TG A    G VNI+       
Sbjct: 80  --STLKNILSLHVLLDYFGTKKLHQIRDGSALAATLFQATGAAPGTSGFVNITD--LRGG 135

Query: 148 IAIHSPAPYSASNATVLTLIKTLPYNITILSINSLLVPYGFDLMASETRPPLGLNITKAL 207
                P     S+  V + I+ +PYNI+I+ I+ +L     +  A+ T  P  +N+T  +
Sbjct: 136 KVGFGPDGGDLSSFFVKS-IEEVPYNISIIQISRVLPS---ETAAAPTPAPAEMNLT-GI 190

Query: 208 IDGHNFNV-AASMLAASGVVEEFEADEGGAGITLFVPTDLAFAD-LPNNVKLQSLPADKK 265
           +  H   V A ++L   G  + ++    G G+T+F P D A    LP   K ++L A KK
Sbjct: 191 MSAHGCKVFAETLLTNPGASKTYQESLEG-GMTVFCPGDDAMKGFLP---KYKNLTAPKK 246

Query: 266 AVVLKFHVLHSYYPLGSLESIVNPVQPTLATEDMGAGRFTLNISRVNGSVAIDTGLVQAS 325
              L F  + +YY +  L+S   P+  TLAT+  GA +F L +      V + T +    
Sbjct: 247 EAFLDFLAVPTYYSMAMLKSNNGPMN-TLATD--GANKFELTVQNDGEKVTLKTRINTVK 303

Query: 326 VTQTVFDQNPLAIFGVSKVLLPREIF 351
           +  T+ D+ PLAI+   KVLLP+E+F
Sbjct: 304 IVDTLIDEQPLAIYATDKVLLPKELF 329

May be a cell surface adhesion protein.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9SU13|FLA2_ARATH Fasciclin-like arabinogalactan protein 2 OS=Arabidopsis thaliana GN=FLA2 PE=1 SV=1

 Score =  117 bits (293), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 104/327 (31%), Positives = 165/327 (50%), Gaps = 23/327 (7%)

Query: 28  ALNITDLLLPYPDLSAFSALISSTSSAVAADLSHRSSITFLAVPNSYLNSPSSLDFTRRL 87
           A NIT +L   PD S F+  +S+T   +A +++ R +IT LAV NS ++S  S  +    
Sbjct: 26  AHNITRILAKDPDFSTFNHYLSATH--LADEINRRQTITVLAVDNSAMSSILSNGY---- 79

Query: 88  SPSSLADLLRYHVLLQYLSWADLRKIPSSGILVTTLFQTTGRASSNFGSVNISRNPATNA 147
           S   + ++L  HVL+ Y     L +I        ++FQ+TG A+   G +NI+ +     
Sbjct: 80  SLYQIRNILSLHVLVDYFGTKKLHQITDGSTSTASMFQSTGSATGTSGYINIT-DIKGGK 138

Query: 148 IAIHSPAPYSASNATVLTLIKTLPYNITILSINSLLV-PYGFDLMASETRPPLGLNITKA 206
           +A       S   A  +  +   PYNI++L I+ +L  P       + T  P  L +T  
Sbjct: 139 VAFGVQDDDSKLTAHYVKSVFEKPYNISVLHISQVLTSPEA----EAPTASPSDLILT-T 193

Query: 207 LIDGHNFNVAASMLAASGVVEEFEADEGGAGITLFVPTDLAFAD-LPNNVKLQSL-PADK 264
           +++       + +L ++G  + F+ D    G+T+F P+D A    +P   K +SL PA+K
Sbjct: 194 ILEKQGCKAFSDILKSTGADKTFQ-DTVDGGLTVFCPSDSAVGKFMP---KFKSLSPANK 249

Query: 265 KAVVLKFHVLHSYYPLGSLESIVNPVQPTLATEDMGAGRFTLNISRVNGSVAIDTGLVQA 324
            A+VL +H +  Y  L  L S  N    TLATE  G  +F   +      V ++T +V A
Sbjct: 250 TALVL-YHGMPVYQSLQMLRS-GNGAVNTLATE--GNNKFDFTVQNDGEDVTLETDVVTA 305

Query: 325 SVTQTVFDQNPLAIFGVSKVLLPREIF 351
            V  T+ DQ PL ++ + KVLLPREI+
Sbjct: 306 KVMGTLKDQEPLIVYKIDKVLLPREIY 332

May be a cell surface adhesion protein.

Arabidopsis thaliana (taxid: 3702)

>sp|Q8LEE9|FLA12_ARATH Fasciclin-like arabinogalactan protein 12 OS=Arabidopsis thaliana GN=FLA12 PE=2 SV=2

 Score = 80.9 bits (198), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 47/152 (30%), Positives = 82/152 (53%), Gaps = 5/152 (3%)

Query: 202 NITKALIDGHNFNVAASMLAASGVVEEF--EADEGGAGITLFVPTDLAFADLPNNVKLQS 259
           N+TK L     F V   +L ++GV  +   + +    GIT+F P+D +F  L     L S
Sbjct: 39  NVTKILEKAGQFTVFIRLLKSTGVANQLYGQLNNSDNGITIFAPSDSSFTGLKAGT-LNS 97

Query: 260 LPADKKAVVLKFHVLHSYYPLGSLESIVNPVQPTLATEDMGAGRFTLNISRVNGSVAIDT 319
           L  +++  +++FHV+ SY    + ++I NP++      D   G F LN++    +V I +
Sbjct: 98  LTDEQQVELIQFHVIPSYVSSSNFQTISNPLRTQAG--DSADGHFPLNVTTSGNTVNITS 155

Query: 320 GLVQASVTQTVFDQNPLAIFGVSKVLLPREIF 351
           G+   +V+  V+    LA++ V KVLLP+++F
Sbjct: 156 GVTNTTVSGNVYSDGQLAVYQVDKVLLPQQVF 187

May be a cell surface adhesion protein.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9SJ81|FLA7_ARATH Fasciclin-like arabinogalactan protein 7 OS=Arabidopsis thaliana GN=FLA7 PE=1 SV=1

 Score = 80.5 bits (197), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 52/158 (32%), Positives = 85/158 (53%), Gaps = 11/158 (6%)

Query: 201 LNITKALIDGHNFNVAASMLAASGVVEEFE--ADEGGAGITLFVPTDLAFADLPNNVKLQ 258
           +N+T+ L     F+     L ++GV+E F+  A+    GIT+FVP D AF     N  L 
Sbjct: 45  VNLTELLSVAGPFHTFLDYLLSTGVIETFQNQANNTEEGITIFVPKDDAF-KAQKNPPLS 103

Query: 259 SLPADKKAVVLKFHVLHSYYPLGSLESIVN--PVQPTLATEDMGAGRFTLNISRVNGSVA 316
           +L  D+   ++ FH L  YY L   +++    PV           G+++L  + V+G+V 
Sbjct: 104 NLTKDQLKQLVLFHALPHYYSLSEFKNLSQSGPV------STFAGGQYSLKFTDVSGTVR 157

Query: 317 IDTGLVQASVTQTVFDQNPLAIFGVSKVLLPREIFGKD 354
           ID+   +  V+ +VF  +P+A++ V++VLLP  IFG D
Sbjct: 158 IDSLWTRTKVSSSVFSTDPVAVYQVNRVLLPEAIFGTD 195

May be a cell surface adhesion protein.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9FFH6|FLA13_ARATH Fasciclin-like arabinogalactan protein 13 OS=Arabidopsis thaliana GN=FLA13 PE=1 SV=1

 Score = 78.6 bits (192), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 56/194 (28%), Positives = 92/194 (47%), Gaps = 12/194 (6%)

Query: 201 LNITKALIDGHNFNVAASMLAASGVVEEF--EADEGGAGITLFVPTDLAFADLPNNVKLQ 258
           +NIT  L  G  F     +L  + +  +   + +    G+T+  PTD AF +L     L 
Sbjct: 35  INITAILEKGGQFVTLIRLLNTTQIGNQINIQINSSSEGMTVLAPTDNAFQNLKPGT-LN 93

Query: 259 SLPADKKAVVLKFHVLHSYYPLGSLESIVNPVQPTLATEDMGAGRFTLNISRVNGSVAID 318
            L  D +  ++ +HV   +Y L  L S+ NPV+   +  D+G G + LN +     V + 
Sbjct: 94  KLSPDDQVKLILYHVSPKFYTLEDLLSVSNPVRTQASGRDVG-GVYGLNFTGQGNQVNVS 152

Query: 319 TGLVQASVTQTVFDQNPLAIFGVSKVLLPREIFGKDR--------NARPPGVSPSPEKSP 370
           TG+V+  ++ ++  + PLA++ V  VLLP E+FG+ +         ++ P VS   E S 
Sbjct: 153 TGVVETRLSTSLRQERPLAVYVVDMVLLPEEMFGERKISPMAPPPKSKSPDVSDDSESSK 212

Query: 371 GLGGPSSHLTSPPG 384
               PS    S  G
Sbjct: 213 KAAAPSESEKSGSG 226

May be a cell surface adhesion protein.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9SIL7|FLA6_ARATH Fasciclin-like arabinogalactan protein 6 OS=Arabidopsis thaliana GN=FLA6 PE=2 SV=2

 Score = 78.6 bits (192), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 60/219 (27%), Positives = 98/219 (44%), Gaps = 11/219 (5%)

Query: 201 LNITKALIDGHNFNVAASMLAAS--GVVEEFEADEGGAGITLFVPTDLAFADLPNNVKLQ 258
           +N+T  L  GH F     +L  +  G     + +    G+T+F PTD AF  L     L 
Sbjct: 37  INLTAILEAGHQFTTLIQLLNTTQVGFQVSVQLNSSDQGMTIFAPTDNAFNKLKPGT-LN 95

Query: 259 SLPADKKAVVLKFHVLHSYYPLGSLESIVNPVQPTLATEDMGAGRFTLNISRVNGSVAID 318
           SL   ++  ++ +H++  YY L  L    NPV+     +D G           +  V + 
Sbjct: 96  SLTYQQQIQLMLYHIIPKYYSLSDLLLASNPVRTQATGQDGGVFGLNFTGQAQSNQVNVS 155

Query: 319 TGLVQASVTQTVFDQNPLAIFGVSKVLLPREIFGKDRNARPPGVSPSPEKSPGLGGPSSH 378
           TG+V+  +   +  Q PLA++ V  VLLP E+FG       P  +P+P+ S      SS 
Sbjct: 156 TGVVETRINNALRQQFPLAVYVVDSVLLPEELFGTKTT---PTGAPAPKSS-----TSSS 207

Query: 379 LTSPPGFREDMRSNADGLQLQWRSYVVAAALCCIGLLYV 417
               P   ++ +S    ++      VV+ AL C  ++Y+
Sbjct: 208 DADSPAADDEHKSAGSSVKRTSLGIVVSFALFCCSVIYI 246

May be a cell surface adhesion protein.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9ZWA8|FLA9_ARATH Fasciclin-like arabinogalactan protein 9 OS=Arabidopsis thaliana GN=FLA9 PE=1 SV=1

 Score = 77.4 bits (189), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 52/173 (30%), Positives = 88/173 (50%), Gaps = 8/173 (4%)

Query: 201 LNITKALIDGHNFNVAASMLAASGVVEE--FEADEGGAGITLFVPTDLAFADLPNNVKLQ 258
           +N+T  L  G  F     +L  + V  +   + +    G+T+F PTD AF +L      Q
Sbjct: 38  INLTAILEKGGQFTTFIHLLNITQVGSQVNIQVNSSSEGMTVFAPTDNAFQNLKPGTLNQ 97

Query: 259 SLPADKKAVVLKFHVLHSYYPLGSLESIVNPVQPTLATEDMGAGRFTLNISRVNGSVAID 318
             P D+  ++L +HV   YY +  L S+ NPV+   +  D G   + LN +     + + 
Sbjct: 98  LSPDDQVKLIL-YHVSPKYYSMDDLLSVSNPVRTQASGRDNGV--YGLNFTGQTNQINVS 154

Query: 319 TGLVQASVTQTVFDQNPLAIFGVSKVLLPREIFGKDRNARPPGVSPSPEKSPG 371
           TG V+  ++ ++  Q PLA++ V  VLLP E+FG+ +   P  ++P+P+   G
Sbjct: 155 TGYVETRISNSLRQQRPLAVYVVDMVLLPGEMFGEHK-LSP--IAPAPKSKSG 204

May be a cell surface adhesion protein.

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	419
225434961	425	PREDICTED: fasciclin-like arabinogalacta	0.971	0.957	0.695	1e-162
147822096	470	hypothetical protein VITISV_006797 [Viti	0.968	0.863	0.693	1e-162
157273652	436	fasciclin-like arabinogalactan protein 9	0.914	0.878	0.722	1e-161
449464940	424	PREDICTED: fasciclin-like arabinogalacta	0.954	0.943	0.689	1e-152
157273650	424	fasciclin-like arabinogalactan protein 8	0.976	0.964	0.677	1e-151
356556136	426	PREDICTED: fasciclin-like arabinogalacta	0.980	0.964	0.665	1e-144
224088394	378	predicted protein [Populus trichocarpa]	0.830	0.920	0.727	1e-139
224143816	362	predicted protein [Populus trichocarpa]	0.768	0.889	0.773	1e-134
449527127	332	PREDICTED: LOW QUALITY PROTEIN: fascicli	0.751	0.948	0.722	1e-132
356532591	385	PREDICTED: fasciclin-like arabinogalacta	0.866	0.942	0.612	1e-119

>gi|225434961|ref|XP_002283909.1| PREDICTED: fasciclin-like arabinogalactan protein 4 [Vitis vinifera]

 Score =  578 bits (1491), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 299/430 (69%), Positives = 351/430 (81%), Gaps = 23/430 (5%)

Query: 5   LRISYFTPTIITYLLLITTP-PILALNITDLLLPYPDLSAFSALISSTSSAVAADLSHRS 63
           LRIS+F PT I Y LL+++  PI+ALNIT LL  YPDLS F+ L+++T  AV  DL HRS
Sbjct: 4   LRISHFAPTAIVYFLLLSSSYPIVALNITSLLSTYPDLSDFANLLTAT--AVDGDLIHRS 61

Query: 64  SITFLAVPNSYLNSPSSLDFTRRLSPSSLADLLRYHVLLQYLSWADLRKIPSSGILVTTL 123
           S+T LAVPNS+L S    D T R S SSLAD++RYHVLLQYLSW D+R+IP++G L+TTL
Sbjct: 62  SLTLLAVPNSFLRSS---DLTHRSSASSLADVIRYHVLLQYLSWPDIRQIPAAGKLITTL 118

Query: 124 FQTTGRASSNFGSVNISRNPATNAIAIHSPAPYSASNATVLTLIKTLPYNITILSINSLL 183
           +QTTGRA+SNFGSVNI+RNPA  A+++HSPA YS SNAT+L+LIKTLPYN++I ++NSLL
Sbjct: 119 YQTTGRATSNFGSVNITRNPANGAVSVHSPASYSPSNATILSLIKTLPYNVSIFTVNSLL 178

Query: 184 VPYGFDLMASETRPPLGLNITKALIDGHNFNVAASMLAASGVVEEFEADEGGAGITLFVP 243
           VPYGFDLMASE+RPPLGLNITK LIDGHNFNVAASML ASGVVEEFEADE GAGIT+F+P
Sbjct: 179 VPYGFDLMASESRPPLGLNITKTLIDGHNFNVAASMLMASGVVEEFEADEAGAGITMFIP 238

Query: 244 TDLAFADLPNNVKLQSLPADKKAVVLKFHVLHSYYPLGSLESIVNPVQPTLATEDMGAGR 303
           TD AFADLP   +LQSLPADKKAVVLKFHVLHSYY LGSLESIVNPVQPTLATE+MGA  
Sbjct: 239 TDDAFADLPTTERLQSLPADKKAVVLKFHVLHSYYTLGSLESIVNPVQPTLATEEMGAES 298

Query: 304 FTLNISRVNGSVAIDTGLVQASVTQTVFDQNPLAIFGVSKVLLPREIFGKD--------- 354
           FTLNISRVNGSVAID+G+VQASVTQTVFDQNP+AIFGVSKVLLPREIFG +         
Sbjct: 299 FTLNISRVNGSVAIDSGIVQASVTQTVFDQNPVAIFGVSKVLLPREIFGNNPISTTRPSP 358

Query: 355 -----RNARPPGVSPSPEKSPGLGGPSSHLTSPPGFREDMRSNADGLQLQWRSYVVAAAL 409
                 +A+PP +S SPE SPG   P S ++SPPGF E++RS A   + Q   +++A A+
Sbjct: 359 NNEATGSAQPPDISFSPENSPGSYTPPSGMSSPPGFHEELRSEAQINRAQ--RFILACAM 416

Query: 410 CCIGLLYVLV 419
            CIG LYV+V
Sbjct: 417 SCIG-LYVVV 425

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147822096|emb|CAN72469.1| hypothetical protein VITISV_006797 [Vitis vinifera]

 Score =  576 bits (1484), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 297/428 (69%), Positives = 348/428 (81%), Gaps = 22/428 (5%)

Query: 5   LRISYFTPTIITYLLLITTP-PILALNITDLLLPYPDLSAFSALISSTSSAVAADLSHRS 63
           LRIS+F PT I Y LL+++  PI+ALNIT LL  YPDLS F+ L+++T  AV  DL HRS
Sbjct: 4   LRISHFAPTAIVYFLLLSSSYPIVALNITSLLSTYPDLSDFANLLTAT--AVDGDLIHRS 61

Query: 64  SITFLAVPNSYLNSPSSLDFTRRLSPSSLADLLRYHVLLQYLSWADLRKIPSSGILVTTL 123
           S+T LAVPNS+L S    D T R S SSLAD++RYHVLLQYLSW D+R+IP++G L+TTL
Sbjct: 62  SLTLLAVPNSFLRSS---DLTHRSSASSLADVIRYHVLLQYLSWPDIRQIPAAGKLITTL 118

Query: 124 FQTTGRASSNFGSVNISRNPATNAIAIHSPAPYSASNATVLTLIKTLPYNITILSINSLL 183
           +QTTGRA+SNFGSVNI+RNPA  A+++HSPA YS SNAT+L+LIKTLPYN++I ++NSLL
Sbjct: 119 YQTTGRATSNFGSVNITRNPANGAVSVHSPASYSPSNATILSLIKTLPYNVSIFTVNSLL 178

Query: 184 VPYGFDLMASETRPPLGLNITKALIDGHNFNVAASMLAASGVVEEFEADEGGAGITLFVP 243
           VPYGFDLMASE+RPPLGLNITK LIDGHNFNVAASML ASGVVEEFEADE GAGIT+F+P
Sbjct: 179 VPYGFDLMASESRPPLGLNITKTLIDGHNFNVAASMLMASGVVEEFEADEAGAGITMFIP 238

Query: 244 TDLAFADLPNNVKLQSLPADKKAVVLKFHVLHSYYPLGSLESIVNPVQPTLATEDMGAGR 303
           TD AFADLP   +LQSLPADKKAVVLKFHVLHSYY LGSLESIVNPVQPTLATE+MGA  
Sbjct: 239 TDDAFADLPTTERLQSLPADKKAVVLKFHVLHSYYTLGSLESIVNPVQPTLATEEMGAES 298

Query: 304 FTLNISRVNGSVAIDTGLVQASVTQTVFDQNPLAIFGVSKVLLPREIFGKD--------- 354
           FTLNISRVNGSVAID+G+VQASVTQTVFDQNP+AIFGVSKVLLPREIFG +         
Sbjct: 299 FTLNISRVNGSVAIDSGIVQASVTQTVFDQNPVAIFGVSKVLLPREIFGNNPISTTRPSP 358

Query: 355 -----RNARPPGVSPSPEKSPGLGGPSSHLTSPPGFREDMRSNADGLQLQWRSYVVAAAL 409
                 +A+PP +S SPE SPG   P S ++SPPGF E++RS A   + Q   +++A A+
Sbjct: 359 NNEATGSAQPPDISXSPENSPGSYTPPSGMSSPPGFHEELRSEAQINRAQ--RFILACAM 416

Query: 410 CCIGLLYV 417
            CIGL  V
Sbjct: 417 SCIGLYVV 424

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|157273652|gb|ABV27480.1| fasciclin-like arabinogalactan protein 9 [Gossypium hirsutum]

 Score =  574 bits (1480), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 291/403 (72%), Positives = 330/403 (81%), Gaps = 20/403 (4%)

Query: 30  NITDLLLPYPDLSAFSALISSTSSAVAADLSHRSSITFLAVPNSYLNSPSSLDFTRRLSP 89
           NIT +L  + +L++FS+L+ STS  VA DL+ R  +T LAVPNSYL++  S D TRRL P
Sbjct: 40  NITSILSSFQNLTSFSSLLCSTS--VAPDLTRRDPVTLLAVPNSYLSTSPSSDLTRRLPP 97

Query: 90  SSLADLLRYHVLLQYLSWADLRKIPSSGILVTTLFQTTGRASSNFGSVNISRNPATNAIA 149
           SSL D+LRYHVLLQY SW+DLR+IP SG+LVTTL QTTGR  SNFG+VNI+R+P TN+I 
Sbjct: 98  SSLGDILRYHVLLQYFSWSDLRQIPPSGVLVTTLLQTTGRVHSNFGAVNITRDPLTNSIT 157

Query: 150 IHSPAPYSASNATVLTLIKTLPYNITILSINSLLVPYGFDLMASETRPPLGLNITKALID 209
           I SPAP+S SN TVL+LIKTLPYNITIL+++SLLVPY F+L+ASETRPPLGLNITKALID
Sbjct: 158 IQSPAPFSPSNVTVLSLIKTLPYNITILAVDSLLVPYDFNLLASETRPPLGLNITKALID 217

Query: 210 GHNFNVAASMLAASGVVEEFEADEGGAGITLFVPTDLAFADLPNNVKLQSLPADKKAVVL 269
           GHNFNVAASMLAASGVV+EFEADEGGAGITLFVPTD AF DLP NVKLQSLPADKKAVVL
Sbjct: 218 GHNFNVAASMLAASGVVDEFEADEGGAGITLFVPTDDAFGDLPGNVKLQSLPADKKAVVL 277

Query: 270 KFHVLHSYYPLGSLESIVNPVQPTLATEDMGAGRFTLNISRVNGSVAIDTGLVQASVTQT 329
           KFHVLHSYYPLGSLESIVNPVQPTLATED GAG FTLNISRVNGSVAIDTG+VQASVTQT
Sbjct: 278 KFHVLHSYYPLGSLESIVNPVQPTLATEDNGAGSFTLNISRVNGSVAIDTGIVQASVTQT 337

Query: 330 VFDQNPLAIFGVSKVLLPREIFGKDR--------------NARPPGVSPSPEKSPGLGGP 375
           VFDQNP+AIFGVSKVLLPREIFGKD                 +PP  SPSPE S G  GP
Sbjct: 338 VFDQNPVAIFGVSKVLLPREIFGKDSAGVTSKPGNAVVGTTVQPPETSPSPENSAGFSGP 397

Query: 376 SSHLTSPPGFREDMRSNADGLQLQWRSYVVAAALCCIGLLYVL 418
           +SHL+SPPGFRE++ S       ++R       +CCIGL+ V+
Sbjct: 398 ASHLSSPPGFREEITSKGG----RYRMQSCIVTVCCIGLVLVV 436

Source: Gossypium hirsutum

Species: Gossypium hirsutum

Genus: Gossypium

Family: Malvaceae

Order: Malvales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449464940|ref|XP_004150187.1| PREDICTED: fasciclin-like arabinogalactan protein 4-like [Cucumis sativus]

 Score =  543 bits (1399), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 295/428 (68%), Positives = 349/428 (81%), Gaps = 28/428 (6%)

Query: 7   ISYFTPTIITYLLLITTPPILALNITDLLLPYPDLSAFSALISSTSSAVAADLSHRSSIT 66
           IS+FTP  + Y LL+++ PILALN + LL  +PDLS F+A    +SSA+ +DL+HR+S+T
Sbjct: 8   ISHFTPLHLLYFLLLSSSPILALNFSSLLSSFPDLSDFAA--LLSSSALLSDLNHRTSLT 65

Query: 67  FLAVPNSYLNSPSSLDFTRRLSPSSLADLLRYHVLLQYLSWADLRKIPSSGILVTTLFQT 126
            LAVPNSYL + S  D T R+ PSSLADLLRYHVLLQYLS +DLR I  SG LVTTLFQT
Sbjct: 66  LLAVPNSYLAASS--DLTHRIPPSSLADLLRYHVLLQYLSPSDLRHISPSGKLVTTLFQT 123

Query: 127 TGRASSNFGSVNISRNPATNAIAIHSPAPYSASNATVLTLIKTLPYNITILSINSLLVPY 186
           TGRA+S+FGSVNI+RNP    +++HSP P+S+SNATVLTL++ LPYN++I ++N+LLVPY
Sbjct: 124 TGRATSDFGSVNITRNPLDGVVSVHSPVPFSSSNATVLTLLQNLPYNVSIFAVNALLVPY 183

Query: 187 GFDLMASETRPPLGLNITKALIDGHNFNVAASMLAASGVVEEFEADEGGAGITLFVPTDL 246
           GFDLMASETRPPLGLNIT+ALIDGHNFNVAASML+ASGVVEEFEADEGGAGITLFVPTD+
Sbjct: 184 GFDLMASETRPPLGLNITRALIDGHNFNVAASMLSASGVVEEFEADEGGAGITLFVPTDV 243

Query: 247 AFADLPNNVKLQSLPADKKAVVLKFHVLHSYYPLGSLESIVNPVQPTLATEDMGAGRFTL 306
           AF+DLP  VKLQSLPADKKAVVLKFHVLHSYYPLGSLESIVNPVQPTLATEDMGAGRFTL
Sbjct: 244 AFSDLPGTVKLQSLPADKKAVVLKFHVLHSYYPLGSLESIVNPVQPTLATEDMGAGRFTL 303

Query: 307 NISRVNGSVAIDTGLVQASVTQTVFDQNPLAIFGVSKVLLPREIFGKD------------ 354
           NISRVNGSV I+TG+VQASVTQTVFDQNP+AIFGVS+VLLPREIFG +            
Sbjct: 304 NISRVNGSVGINTGIVQASVTQTVFDQNPVAIFGVSEVLLPREIFGNNPMMTAKPRNEIV 363

Query: 355 RNARPP-GVSPSPEKSPGLGGPSSHLTSPPGFREDMRSNA--DGLQLQWRSYVVAAALCC 411
            NA+PP G++ SPE +    GP  HL+SPPG+ E++RS A  +G      ++      CC
Sbjct: 364 GNAQPPEGMAMSPESN----GPQLHLSSPPGYGEEIRSVAAING----GVNFFFTLCSCC 415

Query: 412 IGL-LYVL 418
           I + LYV+
Sbjct: 416 IAVALYVI 423

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|157273650|gb|ABV27479.1| fasciclin-like arabinogalactan protein 8 [Gossypium hirsutum]

 Score =  540 bits (1390), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 294/434 (67%), Positives = 338/434 (77%), Gaps = 25/434 (5%)

Query: 1   MDFKLRISYFTPTIITYLLLITTPPILALNITDLLLPYPDLSAFSALISSTSSAVAADLS 60
           M     IS+ TP      LL+++     LNIT +L  + +L++       TSS+VA+DL+
Sbjct: 1   MTVSFFISHITPLTFFCFLLLSSSAAADLNITSILSSFQNLTS--FSSLLTSSSVASDLT 58

Query: 61  HRSS-ITFLAVPNSYLNSPSSLDFTRRLSPSSLADLLRYHVLLQYLSWADLRKIPSSGIL 119
            R   IT LAVPNSYL+ P + D TRRL PSSL D+LRYHVLL Y SW DL +IP SG+L
Sbjct: 59  RRQDPITVLAVPNSYLSIPPASDLTRRLPPSSLGDILRYHVLLHYFSWTDLLQIPPSGVL 118

Query: 120 VTTLFQTTGRASSNFGSVNISRNPATNAIAIHSPAPYSASNATVLTLIKTLPYNITILSI 179
           VTTL QTT RA +NFG+VNI+RNP TN+I I SP  +S SNATVL++IKTLPYNITIL++
Sbjct: 119 VTTLLQTTSRAPANFGAVNITRNPLTNSITIQSPVTFSPSNATVLSVIKTLPYNITILAV 178

Query: 180 NSLLVPYGFDLMASETRPPLGLNITKALIDGHNFNVAASMLAASGVVEEFEADEGGAGIT 239
           +SLLVPY F+LM SETRPPLGLNITKALIDGHNFNVAA+ML+ASGVV+EFEADEGGAGIT
Sbjct: 179 DSLLVPYDFNLMTSETRPPLGLNITKALIDGHNFNVAAAMLSASGVVDEFEADEGGAGIT 238

Query: 240 LFVPTDLAFADLPNNVKLQSLPADKKAVVLKFHVLHSYYPLGSLESIVNPVQPTLATEDM 299
           LFVPTD AF DLP NV+L+SLPADKK+VVLKFHVLHSYYPLGSLESIVNPVQPTLATED 
Sbjct: 239 LFVPTDGAFGDLPGNVRLKSLPADKKSVVLKFHVLHSYYPLGSLESIVNPVQPTLATEDN 298

Query: 300 GAGRFTLNISRVNGSVAIDTGLVQASVTQTVFDQNPLAIFGVSKVLLPREIFGKDR---- 355
           GAG FTLNIS VNGSVAIDTG+VQASVTQTVFDQNP+AIFGVSKVLLPRE+FGKD     
Sbjct: 299 GAGSFTLNISGVNGSVAIDTGIVQASVTQTVFDQNPVAIFGVSKVLLPREVFGKDSAGAM 358

Query: 356 ----------NARPPGVSPSPEKSPGLGGPSSHLTSPPGFREDMRSNADGLQLQWRSYVV 405
                     N +PP  SPSPE SP L GP+S   SP GF EDM+SN +  +LQ  S +V
Sbjct: 359 AKPGNPVVGTNVQPPETSPSPENSPWLSGPAS---SPFGFHEDMKSNGERFRLQ--SCIV 413

Query: 406 AAALCCIGLLYVLV 419
             ALCCIG LY+LV
Sbjct: 414 --ALCCIG-LYLLV 424

Source: Gossypium hirsutum

Species: Gossypium hirsutum

Genus: Gossypium

Family: Malvaceae

Order: Malvales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356556136|ref|XP_003546383.1| PREDICTED: fasciclin-like arabinogalactan protein 4-like [Glycine max]

 Score =  518 bits (1333), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 283/425 (66%), Positives = 332/425 (78%), Gaps = 14/425 (3%)

Query: 3   FKLRISYFTPTIITYLLLITTPPILALNITDLLLPYPDLSAFSALISSTSSAVAADLSHR 62
           +   IS  T  +I    L        LN+T LL   P+LS F++L++S ++ +AADLS R
Sbjct: 7   YGFGISQITLRLIMLFFLFFARAASGLNLTSLLSSVPELSQFTSLLAS-ATPLAADLSDR 65

Query: 63  SSITFLAVPNSYLNSPSSLDFTRRLSPSSLADLLRYHVLLQYLSWADLRKIPSSGILVTT 122
           SS++ LAVPN+YL S   L     LSP++LAD+LRYHVLLQ+LSW+DLR +P SG LVTT
Sbjct: 66  SSLSLLAVPNAYLASDDHLS-RHHLSPAALADVLRYHVLLQFLSWSDLRALPPSGKLVTT 124

Query: 123 LFQTTGRASSNFGSVNISRNPATNAIAIHSPAPYSASNATVLTLIKTLPYNITILSINSL 182
           L QTTGRA+ NFGSVN++R+P +  I+I SPAPYS SNAT+L+LIKTLPYN+TI ++NSL
Sbjct: 125 LLQTTGRATDNFGSVNLTRDPQSGVISIRSPAPYSPSNATILSLIKTLPYNVTIFAVNSL 184

Query: 183 LVPYGFDLMASETRPPLGLNITKALIDGHNFNVAASMLAASGVVEEFEADEGGAGITLFV 242
           L+PYG DLMASETRP + LNIT AL++GHNFNVAASMLAASGVV+EFEADEGGAGITLFV
Sbjct: 185 LIPYGLDLMASETRPNIVLNITNALVNGHNFNVAASMLAASGVVQEFEADEGGAGITLFV 244

Query: 243 PTDLAFADLPNNVKLQSLPADKKAVVLKFHVLHSYYPLGSLESIVNPVQPTLATEDMGAG 302
           P D AFADLP +V LQSLPADKKAVVLKFHVLHSYYPLGSLES+VNP QPTLATE MGAG
Sbjct: 245 PVDDAFADLPPSVALQSLPADKKAVVLKFHVLHSYYPLGSLESVVNPFQPTLATEAMGAG 304

Query: 303 RFTLNISRVNGSVAIDTGLVQASVTQTVFDQNPLAIFGVSKVLLPREIFGKD-------- 354
            FTLNISRVNGSVAI+TG+VQAS+TQTVFDQNP+AIFGVSKVLLPREIFG++        
Sbjct: 305 SFTLNISRVNGSVAINTGIVQASITQTVFDQNPVAIFGVSKVLLPREIFGRNPIVSAKPL 364

Query: 355 RNARPPGVSP-SPEKSPGLGGPSSHLTSPPGFREDMRSNADGLQLQWRSYVVAAALCCIG 413
            NA PP     SPE SPG  G  SHL+SPPGFRED+RS+A G      S      LCCIG
Sbjct: 365 DNAPPPDDDALSPENSPGFDGQPSHLSSPPGFREDVRSHAGG---SGGSLNFVVLLCCIG 421

Query: 414 LLYVL 418
           L +V+
Sbjct: 422 LYFVV 426

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224088394|ref|XP_002308439.1| predicted protein [Populus trichocarpa] gi|222854415|gb|EEE91962.1| predicted protein [Populus trichocarpa]

 Score =  503 bits (1294), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 269/370 (72%), Positives = 313/370 (84%), Gaps = 22/370 (5%)

Query: 30  NITDLLLPYPDLSAFSALISSTSSAVAADLSHRSSITFLAVPNSYLNSPSSLDFTRRLSP 89
           N+T LL  +PD S+F++L++ST S + +DLS+RS++T L +PNSYL+S  SLDFTRRLSP
Sbjct: 18  NLTALLSSFPDFSSFTSLLASTPS-ITSDLSNRSALTLLVIPNSYLSS--SLDFTRRLSP 74

Query: 90  SSLADLLRYHVLLQYLSWADLRKIPSSGILVTTLFQTTGRASSNFGSVNISRNPATNAIA 149
           SSL DLLRYH+LLQYLS +DL ++P +G L+TTLFQTTGRASSNFGSVNI+RNP TNAI 
Sbjct: 75  SSLTDLLRYHILLQYLSSSDLHQLPPAGALITTLFQTTGRASSNFGSVNITRNPVTNAIT 134

Query: 150 IHSPAPYSASNATVLTLIKTLPYNITILSINSLLVPYGFDLMASETRPPLGLNITKALID 209
           I SP+P+S+SNATVL+LIKTLPYN++I+S+NSLLVPYGFDLMASETRP LGLNITKAL+D
Sbjct: 135 ISSPSPFSSSNATVLSLIKTLPYNVSIISVNSLLVPYGFDLMASETRPTLGLNITKALLD 194

Query: 210 GHNFNVAASMLAASGVVEEFEADEGGAGITLFVPTDLAFADL-PNNVKLQSLPADKKAVV 268
           G +F VAAS+L+ASGVVEEFEADEGGAGITLFVPTD AF+DL   +V LQSLPADKKA V
Sbjct: 195 GRSFFVAASLLSASGVVEEFEADEGGAGITLFVPTDSAFSDLSETDVSLQSLPADKKADV 254

Query: 269 LKFHVLHSYYPLGSLESIVNPVQPTLATEDMGAGRFTLNISRVNGSVAIDTGLVQASVTQ 328
           LKFHVLHSYYPLGSLESIVNPVQPTLATEDMGAG FTLNISR NGSVAID+G+V ASVTQ
Sbjct: 255 LKFHVLHSYYPLGSLESIVNPVQPTLATEDMGAGSFTLNISRANGSVAIDSGIVLASVTQ 314

Query: 329 TVFDQNPLAIFGVSKVLLPREIFGKD------------RNARPPGVSPSPEKSPGLGGPS 376
           TVFDQNP+AIFGVSKVLLP+EIFG++             NA PP V+ SPE SP +    
Sbjct: 315 TVFDQNPVAIFGVSKVLLPKEIFGRNPVLTSKPGNSDMGNALPPAVALSPESSPKM---- 370

Query: 377 SHLTSPPGFR 386
             L+S PG R
Sbjct: 371 --LSSAPGVR 378

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224143816|ref|XP_002325084.1| predicted protein [Populus trichocarpa] gi|222866518|gb|EEF03649.1| predicted protein [Populus trichocarpa]

 Score =  485 bits (1249), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 252/326 (77%), Positives = 292/326 (89%), Gaps = 4/326 (1%)

Query: 30  NITDLLLPYPDLSAFSALISSTSSAVAADLSHRSSITFLAVPNSYLNSPSSLDFTRRLSP 89
           N+T LL  +PD S+F++LI+S  S + +DLS RS++T L +PNSYL+S  SLD TRRLSP
Sbjct: 33  NLTALLSSFPDFSSFTSLITSIPS-LTSDLSDRSALTLLVIPNSYLSS--SLDLTRRLSP 89

Query: 90  SSLADLLRYHVLLQYLSWADLRKIPSSGILVTTLFQTTGRASSNFGSVNISRNPATNAIA 149
           S+LADLLRYH+LLQYLS +DL ++P SG L+TTLFQTTGRASSN GSVNI+RNP TNAI 
Sbjct: 90  SALADLLRYHILLQYLSSSDLHQVPPSGALITTLFQTTGRASSNSGSVNITRNPVTNAIT 149

Query: 150 IHSPAPYSASNATVLTLIKTLPYNITILSINSLLVPYGFDLMASETRPPLGLNITKALID 209
           I SP+P+S+SNATVL+LI TLPYN++I+S+NSLLVPYGFDLMASETRP LGLNITKAL+D
Sbjct: 150 ISSPSPFSSSNATVLSLIMTLPYNVSIISVNSLLVPYGFDLMASETRPTLGLNITKALLD 209

Query: 210 GHNFNVAASMLAASGVVEEFEADEGGAGITLFVPTDLAFADL-PNNVKLQSLPADKKAVV 268
           GH+F VAAS+L+ASGVV+EFEADEGGAGITLFVPTD AF+DL    + LQSLPADKKA V
Sbjct: 210 GHSFLVAASLLSASGVVQEFEADEGGAGITLFVPTDSAFSDLSATAISLQSLPADKKADV 269

Query: 269 LKFHVLHSYYPLGSLESIVNPVQPTLATEDMGAGRFTLNISRVNGSVAIDTGLVQASVTQ 328
           LKFHVLHSYYPLGSLESIVNPVQPTLATEDMGAG FTLNISRVNGSVAID+G+VQASVTQ
Sbjct: 270 LKFHVLHSYYPLGSLESIVNPVQPTLATEDMGAGSFTLNISRVNGSVAIDSGIVQASVTQ 329

Query: 329 TVFDQNPLAIFGVSKVLLPREIFGKD 354
           TVFDQNP+ IFGVSKVLLP+EIFG++
Sbjct: 330 TVFDQNPVVIFGVSKVLLPKEIFGRN 355

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449527127|ref|XP_004170564.1| PREDICTED: LOW QUALITY PROTEIN: fasciclin-like arabinogalactan protein 4-like, partial [Cucumis sativus]

 Score =  478 bits (1229), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 245/339 (72%), Positives = 283/339 (83%), Gaps = 24/339 (7%)

Query: 96  LRYHVLLQYLSWADLRKIPSSGILVTTLFQTTGRASSNFGSVNISRNPATNAIAIHSPAP 155
           LRYHVLLQYLS +DLR I  SG LVTTLFQTTGRA+S+FGSVNI+RNP    +++HSP P
Sbjct: 1   LRYHVLLQYLSPSDLRHISPSGKLVTTLFQTTGRATSDFGSVNITRNPLDGVVSVHSPVP 60

Query: 156 YSASNATVLTLIKTLPYNITILSINSLLVPYGFDLMASETRPPLGLNITKALIDGHNFNV 215
           +S+SNATVLTL++ LPYN++I ++N+LLVPYGFDLMASETRPPLGLNIT+ALIDGHNFNV
Sbjct: 61  FSSSNATVLTLLQNLPYNVSIFAVNALLVPYGFDLMASETRPPLGLNITRALIDGHNFNV 120

Query: 216 AASMLAASGVVEEFEADEGGAGITLFVPTDLAFADLPNNVKLQSLPADKKAVVLKFHVLH 275
           AASML+ASGVVEEFEADEGGAGITLFVPTD+AF+DLP  VKLQSLPADKKAVVLKFHVLH
Sbjct: 121 AASMLSASGVVEEFEADEGGAGITLFVPTDVAFSDLPGTVKLQSLPADKKAVVLKFHVLH 180

Query: 276 SYYPLGSLESIVNPVQPTLATEDMGAGRFTLNISRVNGSVAIDTGLVQASVTQTVFDQNP 335
           SYYPLGSLESIVNPVQPTLATEDMGAGRFTLNISRVNGSV I+TG+VQASVTQTVFDQNP
Sbjct: 181 SYYPLGSLESIVNPVQPTLATEDMGAGRFTLNISRVNGSVGINTGIVQASVTQTVFDQNP 240

Query: 336 LAIFGVSKVLLPREIFGKD------------RNARPP-GVSPSPEKSPGLGGPSSHLTSP 382
           +AIFGVS+VLLPREIFG +             NA+PP G++ SPE +    GP  HL+SP
Sbjct: 241 VAIFGVSEVLLPREIFGNNPMMTAKPRNEIVGNAQPPEGMAMSPESN----GPQLHLSSP 296

Query: 383 PGFREDMRSNA--DGLQLQWRSYVVAAALCCIGL-LYVL 418
           PG+ E++RS A  +G      ++      CCI + LYV+
Sbjct: 297 PGYGEEIRSVAAING----GVNFFFTLCSCCIAVALYVI 331

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356532591|ref|XP_003534855.1| PREDICTED: fasciclin-like arabinogalactan protein 4-like [Glycine max]

 Score =  436 bits (1120), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 245/400 (61%), Positives = 289/400 (72%), Gaps = 37/400 (9%)

Query: 28  ALNITDLLLPYPDLSAFSALISSTSSAVAADLSHRSSITFLAVPNSYLNSPSSLDFTRRL 87
            LN+T LL   P+LS F++L++S ++ +AADLS RSS++ LAVPN+YL +   L     L
Sbjct: 14  GLNLTALLSTVPELSQFTSLLAS-ATPLAADLSDRSSLSILAVPNAYLAADDHLS-RHHL 71

Query: 88  SPSSLADLLRYHVLLQYLSWADLRKIPSSGILVTTLFQTTGRASSNFGSVNISRNPATNA 147
           SP++LAD+LRYHVLLQ+LSW+DLR +P SG L+TTL QTTGRA+ NFGSVN++R+  +  
Sbjct: 72  SPAALADVLRYHVLLQFLSWSDLRALPPSGKLITTLLQTTGRATDNFGSVNLTRDSQSGV 131

Query: 148 IAIHSPAPYSASNATVLTLIKTLPYNITILSINSLLVPYGFDLMASETRPPLGLNITKAL 207
           I+I SP  YS SNAT   L+++L  +        LL P G                    
Sbjct: 132 ISIRSPRTYSPSNATSSPLVESLTLHX---DREWLLWPPGHGY----------------- 171

Query: 208 IDGHNFNVAASMLAASGVVEEFEADEGGAGITLFVPTDLAFADLPNNVKLQSLPADKKAV 267
              HNFNVAASMLAASGV +EFEADEGGAGITLFVP D AFADLP +V LQSLPADKKAV
Sbjct: 172 ---HNFNVAASMLAASGVEQEFEADEGGAGITLFVPVDDAFADLPPSVALQSLPADKKAV 228

Query: 268 VLKFHVLHSYYPLGSLESIVNPVQPTLATEDMGAGRFTLNISRVNGSVAIDTGLVQASVT 327
           VLKFHVLHSYYPLGSLES+VNP QPTLATE MGAG FTLNISRVNGSVAI+TG+VQAS+T
Sbjct: 229 VLKFHVLHSYYPLGSLESVVNPFQPTLATEAMGAGSFTLNISRVNGSVAINTGIVQASIT 288

Query: 328 QTVFDQNPLAIFGVSKVLLPREIFGKD--------RNARPPGVSP-SPEKSPGLGGPSSH 378
           QTVFDQNP+AIFGVSKVLLPREIFGK+         NA PP     SPE SPG  G  SH
Sbjct: 289 QTVFDQNPVAIFGVSKVLLPREIFGKNPTVSTKPLDNAPPPDDDALSPENSPGFDGQPSH 348

Query: 379 LTSPPGFREDMRSNADGLQLQWRSYVVAAALCCIGLLYVL 418
           L+SPPGFRED+RS+A G        V+   LCCIGL +V+
Sbjct: 349 LSSPPGFREDVRSHAGGAGGSLNFVVL---LCCIGLYFVV 385

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	419
TAIR|locus:2075185	420	SOS5 "salt overly sensitive 5"	0.830	0.828	0.585	5.6e-100
TAIR|locus:2101841	422	FLA10 "FASCICLIN-like arabinog	0.766	0.760	0.334	5.1e-35
TAIR|locus:2050822	420	FLA8 "FASCICLIN-like arabinoga	0.737	0.735	0.350	2.8e-34
TAIR|locus:2162197	424	FLA1 "FASCICLIN-like arabinoga	0.718	0.709	0.316	1.8e-30
TAIR|locus:2135818	403	FLA2 "FASCICLIN-like arabinoga	0.811	0.843	0.293	4.5e-27
TAIR|locus:2175153	249	FLA12 "FASCICLIN-like arabinog	0.396	0.666	0.325	7.7e-20
TAIR|locus:2054769	247	FLA6 "FASCICLIN-like arabinoga	0.553	0.939	0.294	3.8e-19
TAIR|locus:2049218	254	FLA7 "FASCICLIN-like arabinoog	0.398	0.657	0.338	2.4e-18
TAIR|locus:2024122	247	FLA9 "FASCICLIN-like arabinoog	0.441	0.748	0.303	1.9e-17
TAIR|locus:2167664	247	FLA13 "AT5G44130" [Arabidopsis	0.415	0.704	0.311	4.2e-17

TAIR|locus:2075185 SOS5 "salt overly sensitive 5" [Arabidopsis thaliana (taxid:3702)]

 Score = 992 (354.3 bits), Expect = 5.6e-100, P = 5.6e-100
 Identities = 222/379 (58%), Positives = 274/379 (72%)

Query:    58 DLSHRSSITFLAVPNSYLNSPSSLDFTRRLSPSSLADLLRYHVLLQYLSWADLRKIPSSG 117
             +LS R+S+T LAVPNS  +S +SLD TRRL PS+LADLLR+HVLLQ+LS +DLR+IP SG
Sbjct:    56 ELSGRNSLTLLAVPNSQFSS-ASLDLTRRLPPSALADLLRFHVLLQFLSDSDLRRIPPSG 114

Query:   118 ILVTTLFQTTGRASSNFGSVNISRNPATNAIAIHSPAPYSASNATVLTLIKTLPYNITIL 177
               VTTL++ +GR     GSVN++R+PA+ ++ I SPA     N TVL L++T P NIT+L
Sbjct:   115 SAVTTLYEASGRTFFGSGSVNVTRDPASGSVTIGSPA---TKNVTVLKLLETKPPNITVL 171

Query:   178 SINSLLVPYGFDLMASETR-----------PPLGLNITKALIDGHNFNVAASMLAASGVV 226
             +++SL+VP G D+ ASET            PP G+N+T+ LI+GHNFNVA S+L ASGV+
Sbjct:   172 TVDSLIVPTGIDITASETLTPPPTSTSLSPPPAGINLTQILINGHNFNVALSLLVASGVI 231

Query:   227 EEFEADEGGAGITLFVPTDLAFADLPNNVKLQSLPADKKAVVLKFHVLHSYYPLGSLESI 286
              EFE DE GAGIT+FVPTD AF+DLP+NV LQSLPA++KA VLKFHVLHSYY LGSLESI
Sbjct:   232 TEFENDERGAGITVFVPTDSAFSDLPSNVNLQSLPAEQKAFVLKFHVLHSYYTLGSLESI 291

Query:   287 VNPVQPTLATEDMGAGRFTLNISRVNGS-VAIDTGLVQASVTQTVFDQNPLAIFGVSKVL 345
              NPVQPTLATE+MGAG +TLNISRVNGS V I++G+V A VTQT FDQNP+++FGVSKVL
Sbjct:   292 TNPVQPTLATEEMGAGSYTLNISRVNGSIVTINSGVVLAVVTQTAFDQNPVSVFGVSKVL 351

Query:   346 LPREIFGKD----RNARPPGVSPSPEKSPGLGGPSSHLTSPPGFREDMRSNADGLQLQWR 401
             LP+E+F K       A P  +S SPE S       S L SPP  RE + S A    L   
Sbjct:   352 LPKELFPKSGQPVATAPPQEISLSPESS---SEQPSRLVSPP--REIVSSGAVKRPL--- 403

Query:   402 SYVVAAALC-CIGLLYVLV 419
              ++V    C CI   YVLV
Sbjct:   404 GFLVL--WCWCIAFCYVLV 420

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0031225 "anchored to membrane" evidence=TAS

GO:0007155 "cell adhesion" evidence=ISS

GO:0009651 "response to salt stress" evidence=IMP

GO:0009825 "multidimensional cell growth" evidence=IMP

GO:0009897 "external side of plasma membrane" evidence=IDA

GO:0030247 "polysaccharide binding" evidence=TAS

GO:0046658 "anchored to plasma membrane" evidence=IDA

TAIR|locus:2101841 FLA10 "FASCICLIN-like arabinogalactan-protein 10" [Arabidopsis thaliana (taxid:3702)]

 Score = 379 (138.5 bits), Expect = 5.1e-35, P = 5.1e-35
 Identities = 116/347 (33%), Positives = 182/347 (52%)

Query:    58 DLSHRSSITFLAVPNSYLNSPSSLDFTRRLSPSSLADLLRYHVLLQYLSWADLRKIPSSG 117
             +++ R++IT L + N  +   SSL     LS   + + L   VLL Y     L ++    
Sbjct:    53 EINSRTTITVLVLNNGAM---SSLAGKHPLSV--VKNALSLLVLLDYYDPLKLHQLSKGT 107

Query:   118 ILVTTLFQTTGRASSNFGSVNISRNPATNAIAIHSPAPYSASNATVLTLIKTLPYNITIL 177
              L TTL+QTTG A  N G VN++ +     +   S AP S  +++    +K +PYNI++L
Sbjct:   108 TLTTTLYQTTGHALGNLGFVNVT-DLKGGKVGFGSAAPGSKLDSSYTKSVKQIPYNISVL 166

Query:   178 SINSLLVPYGFDLMASETRPPLGL-NITKALIDGHNFNVAASMLAASGVVEEFEADEGGA 236
              IN+ ++  G  ++ +      G+ NIT  L++       A++L +SGV++ FE+     
Sbjct:   167 EINAPIIAPG--ILTAPAPSSAGVSNIT-GLLEKAGCKTFANLLVSSGVIKTFESTVE-K 222

Query:   237 GITLFVPTDLAFA--DLPNNVKLQSLPADKKAVVLKFHVLHSYYPLGSLESIVNPVQPTL 294
             G+T+F P+D AF    +P+   L +L   +   +L++H L  Y P GSL++  + +  TL
Sbjct:   223 GLTVFAPSDEAFKARGVPD---LTNLTQAEVVSLLEYHALAEYKPKGSLKTNKDAIS-TL 278

Query:   295 ATEDMGAGRFTLNISRVNGSVAIDTGLVQASVTQTVFDQNPLAIFGVSKVLLPREIFGKD 354
             AT   GAG++ L  S     V + TG+  + +  TV D+ P+ IF V  VLLP E+FGK 
Sbjct:   279 ATN--GAGKYDLTTSTSGDEVILHTGVGPSRLADTVVDETPVVIFTVDNVLLPAELFGKS 336

Query:   355 RNARP-PG-VS---PSPEKSPG-LGGPSSHLTSPPGFREDMRSNADG 395
              +  P P  VS   P+P KSP  +  PS    SPP    D  S+ +G
Sbjct:   337 SSPAPAPEPVSAPTPTPAKSPSPVEAPSPTAASPPAPPVD-ESSPEG 382

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0031225 "anchored to membrane" evidence=TAS

GO:0046658 "anchored to plasma membrane" evidence=IDA

TAIR|locus:2050822 FLA8 "FASCICLIN-like arabinogalactan protein 8" [Arabidopsis thaliana (taxid:3702)]

 Score = 372 (136.0 bits), Expect = 2.8e-34, P = 2.8e-34
 Identities = 116/331 (35%), Positives = 169/331 (51%)

Query:    58 DLSHRSSITFLAVPNSYLNSPSSLDFTRRLSPSSLADLLRYHVLLQYLSWADLRKIPSSG 117
             +++ R++IT L + N  +   S+L     LS    A  L   VLL Y     L KI    
Sbjct:    53 EINSRTTITVLVLNNGAM---SALAGKHPLSVIKSA--LSLLVLLDYYDPQKLHKISKGT 107

Query:   118 ILVTTLFQTTGRASSNFGSVNISRNPATNAIAIHSPAPYSASNATVLTLIKTLPYNITIL 177
              L TTL+QTTG A  N G VNI+ +     +   S A  S  +++    +K +PYNI+IL
Sbjct:   108 TLSTTLYQTTGNAPGNLGFVNIT-DLKGGKVGFGSAASGSKLDSSYTKSVKQIPYNISIL 166

Query:   178 SINSLLVPYGFDLMASETRPPLGLNITKALIDGHNFNVAASMLAASGVVEEFEADEGGAG 237
              I++ ++  G  L A      L  NIT  L++       A++L +SGV++ +E+     G
Sbjct:   167 EIDAPIIAPGV-LTAPAPSASLS-NIT-GLLEKAGCKTFANLLVSSGVLKTYESAVE-KG 222

Query:   238 ITLFVPTDLAF-AD-LPNNVKLQSLPADKKAVVLKFHVLHSYYPLGSLESIVNPVQPTLA 295
             +T+F P+D AF A+ +P+  KL          +L++H L  Y P GSL++  N +  TLA
Sbjct:   223 LTVFAPSDEAFKAEGVPDLTKLTQAEV---VSLLEYHALAEYKPKGSLKTNKNNIS-TLA 278

Query:   296 TEDMGAGRFTLNISRVNGSVAIDTGLVQASVTQTVFDQNPLAIFGVSKVLLPREIFGKDR 355
             T   GAG+F L  S     V + TG+  + +  TV D  P+ IF V  VLLP E+FGK +
Sbjct:   279 TN--GAGKFDLTTSTSGDEVILHTGVAPSRLADTVLDATPVVIFTVDNVLLPAELFGKSK 336

Query:   356 NARP-PGVSP--SPEKSPGLGGPSSHLTSPP 383
             +  P P   P  +P  SP    PS    SPP
Sbjct:   337 SPSPAPAPEPVTAPTPSPA-DAPSPTAASPP 366

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0031225 "anchored to membrane" evidence=TAS

GO:0046658 "anchored to plasma membrane" evidence=IDA

GO:0009505 "plant-type cell wall" evidence=IDA

GO:0048046 "apoplast" evidence=IDA

GO:0007389 "pattern specification process" evidence=RCA

GO:0008361 "regulation of cell size" evidence=RCA

GO:0009664 "plant-type cell wall organization" evidence=RCA

GO:0009832 "plant-type cell wall biogenesis" evidence=RCA

GO:0009926 "auxin polar transport" evidence=RCA

GO:0010015 "root morphogenesis" evidence=RCA

GO:0040007 "growth" evidence=RCA

TAIR|locus:2162197 FLA1 "FASCICLIN-like arabinogalactan 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 336 (123.3 bits), Expect = 1.8e-30, P = 1.8e-30
 Identities = 102/322 (31%), Positives = 161/322 (50%)

Query:    58 DLSHRSSITFLAVPNSYLNSPSSLDFTRRLSPSSLADLLRYHVLLQYLSWADLRKIPSSG 117
             +++ R +IT  AV N+ +++ +S  +T     S+L ++L  HVLL Y     L +I    
Sbjct:    52 EINRRRTITVCAVDNAAMSALTSKGYTL----STLKNILSLHVLLDYFGTKKLHQIRDGS 107

Query:   118 ILVTTLFQTTGRASSNFGSVNISRNPATNAIAIHSPAPYSASNATVLTLIKTLPYNITIL 177
              L  TLFQ TG A    G VNI+ +     +    P     S+  V + I+ +PYNI+I+
Sbjct:   108 ALAATLFQATGAAPGTSGFVNIT-DLRGGKVGF-GPDGGDLSSFFVKS-IEEVPYNISII 164

Query:   178 SINSLLVPYGFDLMASETRPPLGLNITKALIDGHNFNV-AASMLAASGVVEEFEADEGGA 236
              I+ +L P   +  A+ T  P  +N+T  ++  H   V A ++L   G  + ++    G 
Sbjct:   165 QISRVL-PS--ETAAAPTPAPAEMNLT-GIMSAHGCKVFAETLLTNPGASKTYQESLEG- 219

Query:   237 GITLFVPTDLAFAD-LPNNVKLQSLPADKKAVVLKFHVLHSYYPLGSLESIVNPVQPTLA 295
             G+T+F P D A    LP   K ++L A KK   L F  + +YY +  L+S   P+  TLA
Sbjct:   220 GMTVFCPGDDAMKGFLP---KYKNLTAPKKEAFLDFLAVPTYYSMAMLKSNNGPMN-TLA 275

Query:   296 TEDMGAGRFTLNISRVNGSVAIDTGLVQASVTQTVFDQNPLAIFGVSKVLLPREIFGKDR 355
             T+  GA +F L +      V + T +    +  T+ D+ PLAI+   KVLLP+E+F K  
Sbjct:   276 TD--GANKFELTVQNDGEKVTLKTRINTVKIVDTLIDEQPLAIYATDKVLLPKELF-KAS 332

Query:   356 NARPPGVSPSPEKSPGLGGPSS 377
                 P  +P+PE       P +
Sbjct:   333 AVEAPAPAPAPEDGDVADSPKA 354

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0031225 "anchored to membrane" evidence=TAS

GO:0046658 "anchored to plasma membrane" evidence=IDA

GO:0005618 "cell wall" evidence=IDA

GO:0048364 "root development" evidence=IMP

GO:0048367 "shoot system development" evidence=IMP

TAIR|locus:2135818 FLA2 "FASCICLIN-like arabinogalactan 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 304 (112.1 bits), Expect = 4.5e-27, P = 4.5e-27
 Identities = 107/364 (29%), Positives = 173/364 (47%)

Query:    58 DLSHRSSITFLAVPNSYLNSPSSLDFTRRLSPSSLADLLRYHVLLQYLSWADLRKIPSSG 117
             +++ R +IT LAV NS ++S  S  +    S   + ++L  HVL+ Y     L +I    
Sbjct:    54 EINRRQTITVLAVDNSAMSSILSNGY----SLYQIRNILSLHVLVDYFGTKKLHQITDGS 109

Query:   118 ILVTTLFQTTGRASSNFGSVNISRNPATNAIAIHSPAPYSASNATVLTLIKTLPYNITIL 177
                 ++FQ+TG A+   G +NI+ +     +A       S   A  +  +   PYNI++L
Sbjct:   110 TSTASMFQSTGSATGTSGYINIT-DIKGGKVAFGVQDDDSKLTAHYVKSVFEKPYNISVL 168

Query:   178 SINSLLVPYGFDLMASETRPPLGLNITKALIDGHNFNVAASMLAASGVVEEFEADEGGAG 237
              I+ +L     +   + T  P  L +T  +++       + +L ++G  + F+ D    G
Sbjct:   169 HISQVLTSPEAE---APTASPSDLILT-TILEKQGCKAFSDILKSTGADKTFQ-DTVDGG 223

Query:   238 ITLFVPTDLAFAD-LPNNVKLQSL-PADKKAVVLKFHVLHSYYPLGSLESIVNPVQPTLA 295
             +T+F P+D A    +P   K +SL PA+K A+VL +H +  Y  L  L S  N    TLA
Sbjct:   224 LTVFCPSDSAVGKFMP---KFKSLSPANKTALVL-YHGMPVYQSLQMLRS-GNGAVNTLA 278

Query:   296 TEDMGAGRFTLNISRVNGSVAIDTGLVQASVTQTVFDQNPLAIFGVSKVLLPREIFGKDR 355
             TE  G  +F   +      V ++T +V A V  T+ DQ PL ++ + KVLLPREI+   +
Sbjct:   279 TE--GNNKFDFTVQNDGEDVTLETDVVTAKVMGTLKDQEPLIVYKIDKVLLPREIYKAVK 336

Query:   356 NARP-PGVSPSPEKSP--GLGGPSSHLTSPPGFR-EDMRSNADGLQLQWRSYVVAAAL-C 410
              + P P  S    K+      GPS+   S       D ++ A    +   S VV A +  
Sbjct:   337 TSAPAPKSSKKKPKNAEADADGPSADAPSDDDVEVADDKNGAVSAMITRTSNVVTAIVGL 396

Query:   411 CIGL 414
             C G+
Sbjct:   397 CFGV 400

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0031225 "anchored to membrane" evidence=TAS

GO:0046658 "anchored to plasma membrane" evidence=IDA

GO:0005774 "vacuolar membrane" evidence=IDA

GO:0016020 "membrane" evidence=IDA

GO:0006084 "acetyl-CoA metabolic process" evidence=RCA

GO:0006816 "calcium ion transport" evidence=RCA

GO:0007030 "Golgi organization" evidence=RCA

GO:0009651 "response to salt stress" evidence=RCA

GO:0016126 "sterol biosynthetic process" evidence=RCA

GO:0016132 "brassinosteroid biosynthetic process" evidence=RCA

GO:0048767 "root hair elongation" evidence=RCA

TAIR|locus:2175153 FLA12 "FASCICLIN-like arabinogalactan-protein 12" [Arabidopsis thaliana (taxid:3702)]

 Score = 238 (88.8 bits), Expect = 7.7e-20, P = 7.7e-20
 Identities = 57/175 (32%), Positives = 95/175 (54%)

Query:   197 PPLGLNITKALIDGHNFNVAASMLAASGVVEEF--EADEGGAGITLFVPTDLAFADLPNN 254
             PP   N+TK L     F V   +L ++GV  +   + +    GIT+F P+D +F  L   
Sbjct:    34 PPGPTNVTKILEKAGQFTVFIRLLKSTGVANQLYGQLNNSDNGITIFAPSDSSFTGLKAG 93

Query:   255 VKLQSLPADKKAVVLKFHVLHSYYPLGSLESIVNPVQPTLATEDMGAGRFTLNISRVNGS 314
               L SL  +++  +++FHV+ SY    + ++I NP++ T A  D   G F LN++    +
Sbjct:    94 T-LNSLTDEQQVELIQFHVIPSYVSSSNFQTISNPLR-TQAG-DSADGHFPLNVTTSGNT 150

Query:   315 VAIDTGLVQASVTQTVFDQNPLAIFGVSKVLLPREIFGKDRNARPPGVSPSPEKS 369
             V I +G+   +V+  V+    LA++ V KVLLP+++F    + RPP  +P+P  S
Sbjct:   151 VNITSGVTNTTVSGNVYSDGQLAVYQVDKVLLPQQVF----DPRPPAPAPAPSVS 201

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0031225 "anchored to membrane" evidence=TAS

GO:0009834 "secondary cell wall biogenesis" evidence=IMP

TAIR|locus:2054769 FLA6 "FASCICLIN-like arabinogalactan 6" [Arabidopsis thaliana (taxid:3702)]

 Score = 232 (86.7 bits), Expect = 3.8e-19, P = 3.8e-19
 Identities = 75/255 (29%), Positives = 119/255 (46%)

Query:   172 YNITILSINSLLVPYGFDLMASETRP-PLG----LNITKALIDGHNFNVAASMLAAS--G 224
             ++  +L I    +PY   + +  T P P      +N+T  L  GH F     +L  +  G
Sbjct:     6 FSYVVLLIFLFTIPY---IQSQPTAPAPTTEKSPINLTAILEAGHQFTTLIQLLNTTQVG 62

Query:   225 VVEEFEADEGGAGITLFVPTDLAFADLPNNVKLQSLPADKKAVVLKFHVLHSYYPLGSLE 284
                  + +    G+T+F PTD AF  L     L SL   ++  ++ +H++  YY L  L 
Sbjct:    63 FQVSVQLNSSDQGMTIFAPTDNAFNKLKPGT-LNSLTYQQQIQLMLYHIIPKYYSLSDLL 121

Query:   285 SIVNPVQPTLATEDMGAGRFTLNIS--RVNGSVAIDTGLVQASVTQTVFDQNPLAIFGVS 342
                NPV+ T AT   G G F LN +    +  V + TG+V+  +   +  Q PLA++ V 
Sbjct:   122 LASNPVR-TQATGQDG-GVFGLNFTGQAQSNQVNVSTGVVETRINNALRQQFPLAVYVVD 179

Query:   343 KVLLPREIFGKDRNARPPGVSPSPEKSPGLGGPSSHLTSPPGFREDMRSNADGLQLQWRS 402
              VLLP E+FG      P G +P+P+ S      SS   SP    ++ +S    ++     
Sbjct:   180 SVLLPEELFGT--KTTPTG-APAPKSSTS----SSDADSPAA-DDEHKSAGSSVKRTSLG 231

Query:   403 YVVAAALCCIGLLYV 417
              VV+ AL C  ++Y+
Sbjct:   232 IVVSFALFCCSVIYI 246

GO:0005886 "plasma membrane" evidence=ISM

GO:0031225 "anchored to membrane" evidence=TAS

GO:0010054 "trichoblast differentiation" evidence=RCA

GO:0016132 "brassinosteroid biosynthetic process" evidence=RCA

TAIR|locus:2049218 FLA7 "FASCICLIN-like arabinoogalactan 7" [Arabidopsis thaliana (taxid:3702)]

 Score = 225 (84.3 bits), Expect = 2.4e-18, P = 2.4e-18
 Identities = 62/183 (33%), Positives = 98/183 (53%)

Query:   198 PLGLNITKALIDGHNFNVAASMLAASGVVEEFE--ADEGGAGITLFVPTDLAFADLPNNV 255
             P  +N+T+ L     F+     L ++GV+E F+  A+    GIT+FVP D AF     N 
Sbjct:    42 PENVNLTELLSVAGPFHTFLDYLLSTGVIETFQNQANNTEEGITIFVPKDDAFK-AQKNP 100

Query:   256 KLQSLPADKKAVVLKFHVLHSYYPLGSLESIVN--PVQPTLATEDMGAGRFTLNISRVNG 313
              L +L  D+   ++ FH L  YY L   +++    PV  T A      G+++L  + V+G
Sbjct:   101 PLSNLTKDQLKQLVLFHALPHYYSLSEFKNLSQSGPVS-TFA-----GGQYSLKFTDVSG 154

Query:   314 SVAIDTGLVQASVTQTVFDQNPLAIFGVSKVLLPREIFGKDRNARPPGVSPSPEKSPGLG 373
             +V ID+   +  V+ +VF  +P+A++ V++VLLP  IFG D    PP   P+P  +P + 
Sbjct:   155 TVRIDSLWTRTKVSSSVFSTDPVAVYQVNRVLLPEAIFGTDV---PP--MPAPAPAPIVS 209

Query:   374 GPS 376
              PS
Sbjct:   210 APS 212

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0031225 "anchored to membrane" evidence=TAS

GO:0046658 "anchored to plasma membrane" evidence=IDA

GO:0016020 "membrane" evidence=IDA

GO:0006084 "acetyl-CoA metabolic process" evidence=RCA

GO:0009664 "plant-type cell wall organization" evidence=RCA

GO:0009832 "plant-type cell wall biogenesis" evidence=RCA

GO:0010075 "regulation of meristem growth" evidence=RCA

GO:0016126 "sterol biosynthetic process" evidence=RCA

GO:0016132 "brassinosteroid biosynthetic process" evidence=RCA

TAIR|locus:2024122 FLA9 "FASCICLIN-like arabinoogalactan 9" [Arabidopsis thaliana (taxid:3702)]

 Score = 217 (81.4 bits), Expect = 1.9e-17, P = 1.9e-17
 Identities = 60/198 (30%), Positives = 100/198 (50%)

Query:   192 ASETRPPLG-LNITKALIDGHNFNVAASMLAASGVVEE--FEADEGGAGITLFVPTDLAF 248
             A+    P G +N+T  L  G  F     +L  + V  +   + +    G+T+F PTD AF
Sbjct:    28 AAPAPEPAGPINLTAILEKGGQFTTFIHLLNITQVGSQVNIQVNSSSEGMTVFAPTDNAF 87

Query:   249 ADLPNNVKLQSLPADKKAVVLKFHVLHSYYPLGSLESIVNPVQPTLATEDMGAGRFTLNI 308
              +L      Q  P D+  ++L +HV   YY +  L S+ NPV+   +  D G   + LN 
Sbjct:    88 QNLKPGTLNQLSPDDQVKLIL-YHVSPKYYSMDDLLSVSNPVRTQASGRDNGV--YGLNF 144

Query:   309 SRVNGSVAIDTGLVQASVTQTVFDQNPLAIFGVSKVLLPREIFGKDRNARPPGVSPSPE- 367
             +     + + TG V+  ++ ++  Q PLA++ V  VLLP E+FG+ + + P  ++P+P+ 
Sbjct:   145 TGQTNQINVSTGYVETRISNSLRQQRPLAVYVVDMVLLPGEMFGEHKLS-P--IAPAPKS 201

Query:   368 KSPGL---GGPSSHLTSP 382
             KS G+    G +    SP
Sbjct:   202 KSGGVTDDSGSTKKAASP 219

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0031225 "anchored to membrane" evidence=TAS

GO:0046658 "anchored to plasma membrane" evidence=IDA

TAIR|locus:2167664 FLA13 "AT5G44130" [Arabidopsis thaliana (taxid:3702)]

 Score = 214 (80.4 bits), Expect = 4.2e-17, P = 4.2e-17
 Identities = 57/183 (31%), Positives = 94/183 (51%)

Query:   198 PLG-LNITKALIDGHNFNVAASMLAASGVVEEF--EADEGGAGITLFVPTDLAFADLPNN 254
             P G +NIT  L  G  F     +L  + +  +   + +    G+T+  PTD AF +L   
Sbjct:    31 PAGPINITAILEKGGQFVTLIRLLNTTQIGNQINIQINSSSEGMTVLAPTDNAFQNLKPG 90

Query:   255 VKLQSLPADKKAVVLKFHVLHSYYPLGSLESIVNPVQPTLATEDMGAGRFTLNISRVNGS 314
               L  L  D +  ++ +HV   +Y L  L S+ NPV+   +  D+G G + LN +     
Sbjct:    91 T-LNKLSPDDQVKLILYHVSPKFYTLEDLLSVSNPVRTQASGRDVG-GVYGLNFTGQGNQ 148

Query:   315 VAIDTGLVQASVTQTVFDQNPLAIFGVSKVLLPREIFGKDRNARPPGVSPSPE-KSPGLG 373
             V + TG+V+  ++ ++  + PLA++ V  VLLP E+FG +R   P  ++P P+ KSP + 
Sbjct:   149 VNVSTGVVETRLSTSLRQERPLAVYVVDMVLLPEEMFG-ERKISP--MAPPPKSKSPDVS 205

Query:   374 GPS 376
               S
Sbjct:   206 DDS 208

GO:0003674 "molecular_function" evidence=ND

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0031225 "anchored to membrane" evidence=TAS

GO:0046658 "anchored to plasma membrane" evidence=IDA

GO:0009505 "plant-type cell wall" evidence=IDA

GO:0009506 "plasmodesma" evidence=IDA

GO:0005794 "Golgi apparatus" evidence=IDA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9SNC3	FLA4_ARATH	No assigned EC number	0.5634	0.8902	0.8880	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: GSVIVG00024338001 SubName- Full=Chromosome chr6 scaffold_3, whole genome shotgun sequence; (425 aa) (Vitis vinifera)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	419
pfam02469	123	pfam02469, Fasciclin, Fasciclin domain	9e-17
smart00554	97	smart00554, FAS1, Four repeated domains in the Fas	6e-12

>gnl|CDD|217054 pfam02469, Fasciclin, Fasciclin domain

 Score = 75.8 bits (187), Expect = 9e-17
 Identities = 39/139 (28%), Positives = 62/139 (44%), Gaps = 18/139 (12%)

Query: 211 HNFNVAASMLAASGVVEEFEADEGGAGITLFVPTDLAFADLPNNVKLQSLPADKKAV--V 268
             F+   ++L A+G+V+     +G    T+F PTD AFA LP    L  L  DK+ +  +
Sbjct: 1   PGFSTFVALLKAAGLVDTLNGSQGP--FTVFAPTDEAFAKLPAGT-LNFLLKDKEQLKNL 57

Query: 269 LKFHVLHSYYPLGSLESIVNPVQPTLATEDMGAGRFTLNISRVNGSVAIDTGLVQASVTQ 328
           LK+HV+        L++       TL           L ++   G+V ++     A V Q
Sbjct: 58  LKYHVVPGRLTSSDLKN--GGTLATLQGSK-------LRVNVTGGTVTVNG----ARVVQ 104

Query: 329 TVFDQNPLAIFGVSKVLLP 347
           +  +     I  + KVLLP
Sbjct: 105 SDIEATNGVIHVIDKVLLP 123

This extracellular domain is found repeated four times in grasshopper fasciclin I as well as in proteins from mammals, sea urchins, plants, yeast and bacteria. Length = 123

>gnl|CDD|214719 smart00554, FAS1, Four repeated domains in the Fasciclin I family of proteins, present in many other contexts

 Score = 61.2 bits (149), Expect = 6e-12
 Identities = 31/110 (28%), Positives = 46/110 (41%), Gaps = 13/110 (11%)

Query: 239 TLFVPTDLAFADLPNNVKLQSLPADKKAVVLKFHVLHSYYPLGSLESIVNPVQPTLATED 298
           T+F PTD AF  LP    L SL ADK   +L +HV+        L +      PTLA   
Sbjct: 1   TVFAPTDEAFQKLP--PDLNSLLADKLKNLLLYHVVPGRLSSADLLNGGTL--PTLAGSK 56

Query: 299 MGAGRFTLNISRVNGSVAIDTGLVQASVTQTVFDQNPLAIFGVSKVLLPR 348
                  +  S  +G+V ++     A + +         +  + +VLLP 
Sbjct: 57  -----LRITRSGGSGTVTVNG----ARIVEADIAATNGVVHVIDRVLLPP 97

Length = 97

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	419
COG2335	187	Secreted and surface protein containing fasciclin-	99.89
KOG1437	682	consensus Fasciclin and related adhesion glycoprot	99.81
PF02469	128	Fasciclin: Fasciclin domain; InterPro: IPR000782 T	99.8
smart00554	99	FAS1 Four repeated domains in the Fasciclin I fami	99.74
COG2335	187	Secreted and surface protein containing fasciclin-	99.72
PF02469	128	Fasciclin: Fasciclin domain; InterPro: IPR000782 T	99.53
KOG1437	682	consensus Fasciclin and related adhesion glycoprot	99.51
smart00554	99	FAS1 Four repeated domains in the Fasciclin I fami	99.19

>COG2335 Secreted and surface protein containing fasciclin-like repeats [Cell envelope biogenesis, outer membrane]

Probab=99.89  E-value=1.4e-23  Score=189.49  Aligned_cols=134  Identities=27%  Similarity=0.405  Sum_probs=112.5

Q ss_pred             hhHHHHHhcCCChHHHHHHHHhcCchhhhhcCCCCCceEEEeeCcHHHhcCCCCccCCCC----CHHHHHHHhhhccccc
Q 044183          201 LNITKALIDGHNFNVAASMLAASGVVEEFEADEGGAGITLFVPTDLAFADLPNNVKLQSL----PADKKAVVLKFHVLHS  276 (419)
Q Consensus       201 ~nlt~~L~~~~~fstf~~lL~~t~l~~~l~~~~~~~~~TVFAPTD~AF~~L~~~~~l~~l----~~~~l~~lL~yHvvp~  276 (419)
                      .+|.+....+++|++|..+++.++|.+++++.+   +||||||||+||++|+++ +++.|    ++++|+++|.|||+++
T Consensus        48 ~~iV~~a~~~~~f~tl~~a~~aa~Lv~~L~~~g---p~TVFaPtn~AFa~lp~~-T~~~Ll~pen~~~L~~iLtYHVv~G  123 (187)
T COG2335          48 ADIVESAANNPSFTTLVAALKAAGLVDTLNETG---PFTVFAPTNEAFAKLPAG-TLDALLKPENKPLLTKILTYHVVEG  123 (187)
T ss_pred             hHHHHHHccCcchHHHHHHHHhhhhHHHhcCCC---CeEEecCCHHHHHhCChh-HHHHHhCccchhhhheeeEEEEEcC
Confidence            467776668899999999999999999999987   999999999999999988 65543    6789999999999999


Q ss_pred             cccCCcccccCCCccccccccccCCceEEEEEEEeCCEEEEEeCceeeEEEeecccCCCeEEEEeCccccCCCCc
Q 044183          277 YYPLGSLESIVNPVQPTLATEDMGAGRFTLNISRVNGSVAIDTGLVQASVTQTVFDQNPLAIFGVSKVLLPREIF  351 (419)
Q Consensus       277 ~~~~~~l~~~~~~v~~Tla~~~~~~~~~~l~v~~~g~~V~v~~g~~~a~V~~~~~~~~ngvIh~ID~VL~P~~~f  351 (419)
                      .+..+++.. .+.+ .|+.|     .  .++|...++.+.|    ++++|+..++..+||+||+||+||+|++.-
T Consensus       124 k~~~~~l~~-~~~v-~t~~G-----~--~~~i~~~~~~~~V----n~a~v~~~di~a~NgvIhvID~Vl~Pp~~~  185 (187)
T COG2335         124 KITAADLKS-SGSV-KTVQG-----A--DLKIKVTGGGVYV----NDATVTIADINASNGVIHVIDKVLIPPMDL  185 (187)
T ss_pred             cccHHHhhc-cccc-eeecC-----c--eEEEEEcCCcEEE----eeeEEEeccEeccCcEEEEEeeeccCCCcc
Confidence            999999875 2445 37765     4  4555555555776    579999999999999999999999999753

>KOG1437 consensus Fasciclin and related adhesion glycoproteins [Cell wall/membrane/envelope biogenesis; Extracellular structures]

Probab=99.81  E-value=4.9e-19  Score=187.78  Aligned_cols=271  Identities=18%  Similarity=0.173  Sum_probs=182.1

Q ss_pred             CCcCHHHHhCcCCChHHHHHHHHccCchhHHHhcCCCCeEEEEeCCcCcCCCCCCccccCCCHHHHHHHHHhhhhccccC
Q 044183           27 LALNITDLLLPYPDLSAFSALISSTSSAVAADLSHRSSITFLAVPNSYLNSPSSLDFTRRLSPSSLADLLRYHVLLQYLS  106 (419)
Q Consensus        27 ~a~nI~~~L~~~~~lS~f~~lL~~~~t~L~~~L~~~~~~TvfAPtN~AF~~l~~~~~~~~~~~~~L~~lL~yHVl~~~~~  106 (419)
                      +..++.+++.+ .+-|++.+++.+  -++...|...+.+|+|+|+|++|+.+.     ....+..++++|.||+++.+..
T Consensus       372 ~~~~l~~La~e-~~~st~~rlv~e--lgll~~L~~n~e~t~~lp~n~~fd~~~-----~~~~r~l~~qIL~~HII~~~~~  443 (682)
T KOG1437|consen  372 SLKNLMSLARE-DEISTSMRLVAE--LGLLTALAPNDEATLLLPTNNLFDDLT-----PLESRRLAEQILYNHIIPEYLT  443 (682)
T ss_pred             hHHHHHHHHhc-ccccHHHHHHHh--ccceEEEcCCCceEEeeehhhhccCCC-----hhhhHHHHHHHHHHhCcchhhh
Confidence            35677777665 678999999999  888888877777999999999999542     1233455899999999999988


Q ss_pred             hhcccccCCCCceeeeeecccCCCCCCcceEEEEeCCCC-CeEEEeCCCCCCCcceEEEeeeeecccceeEEeecccccc
Q 044183          107 WADLRKIPSSGILVTTLFQTTGRASSNFGSVNISRNPAT-NAIAIHSPAPYSASNATVLTLIKTLPYNITILSINSLLVP  185 (419)
Q Consensus       107 ~~~L~~l~~~~~l~~Tl~q~tg~~~~~~g~vnit~~~~~-g~v~~~s~~~g~~~~a~vv~~v~~~~~Ng~Vh~Id~vL~P  185 (419)
                      .+++..   +++.++|+.       ++.-.+-+.+.... +...+.   .|+ . +.+...... ..||+||.||+|+.|
T Consensus       444 ~~~~y~---~~~~v~t~g-------~~~l~~fv~r~~~s~~~t~i~---~~~-~-~~Ii~aDi~-~~nGvvH~id~vl~p  507 (682)
T KOG1437|consen  444 SSSMYN---GQTTVRTLG-------KNKLLYFVYRHSVSANVTDIL---IGN-E-ACIIEADIS-VKNGVVHIIDRVLDP  507 (682)
T ss_pred             hhhhhc---ccceeeccC-------CeEEEEEEecccccccceeee---ccc-e-eeEEecccc-eecCceEEeeEEcCc
Confidence            887642   233444432       11111112221110 111110   122 2 444443222 468999999999866


Q ss_pred             ccccccccCCCCCchhhHHHHHhcCCChHHHHHHHHhcCchhhhhcCCCCCceEEEeeCcHHHhcCCCCccCCCCCHHHH
Q 044183          186 YGFDLMASETRPPLGLNITKALIDGHNFNVAASMLAASGVVEEFEADEGGAGITLFVPTDLAFADLPNNVKLQSLPADKK  265 (419)
Q Consensus       186 ~~~~~~~~~~~~~~~~nlt~~L~~~~~fstf~~lL~~t~l~~~l~~~~~~~~~TVFAPTD~AF~~L~~~~~l~~l~~~~l  265 (419)
                                     .++.+.|+++++++.|.++++..++.+++...+   .||+|+|||+||.+...+ ...--....+
T Consensus       508 ---------------~~l~~~l~~d~r~s~~~~~le~~~l~e~l~~~~---~~t~fvPt~ka~~~~~~~-~~~~~~~~~l  568 (682)
T KOG1437|consen  508 ---------------VSLMEDLKTDGRISGTVQGLEGVLLPEELTPEG---NYTLFVPTNKAWQKSTKD-EKSLFHKKAL  568 (682)
T ss_pred             ---------------ccHHHHHhhccchhhhHHhhhhcCChhhhccCC---ceEEEeecccccccCCcc-hhhcchHHHH
Confidence                           256777889999999999999999999996554   999999999999997754 2211246789


Q ss_pred             HHHhhhccccccccCCcccccCCCccccccccccCCceEEEEEEEeCCEEEEEe-----CceeeEEEeecccCCCeEEEE
Q 044183          266 AVVLKFHVLHSYYPLGSLESIVNPVQPTLATEDMGAGRFTLNISRVNGSVAIDT-----GLVQASVTQTVFDQNPLAIFG  340 (419)
Q Consensus       266 ~~lL~yHvvp~~~~~~~l~~~~~~v~~Tla~~~~~~~~~~l~v~~~g~~V~v~~-----g~~~a~V~~~~~~~~ngvIh~  340 (419)
                      ..+++||++++.+.+ +..  +.+   +...     + +.+  ...++.+.+..     .++..++...++...||++|+
T Consensus       569 ~~~l~yH~v~~~~~l-s~~--~~~---~v~~-----~-~k~--s~~~~~~~~~~~~~~~~vn~e~~~~~~i~~~n~~~h~  634 (682)
T KOG1437|consen  569 QDFLKYHLVPGQSRL-SLG--SSP---YVMI-----Q-VKL--SLRGDHLFFSLVNPRGDVNKERLVGIDIMGTNGVVHV  634 (682)
T ss_pred             HHHHHhccccceeee-ecc--ccc---ceee-----e-eeE--EEecccEEeeeeccccceeeeeeeccceeeecceeEE
Confidence            999999999987641 111  122   1111     1 222  22233332221     256677888899999999999


Q ss_pred             eCccccCCCCcCCC
Q 044183          341 VSKVLLPREIFGKD  354 (419)
Q Consensus       341 ID~VL~P~~~f~~~  354 (419)
                      ||.||-|++++...
T Consensus       635 i~~vl~p~~l~~~n  648 (682)
T KOG1437|consen  635 IDLVLKPPDLPFLN  648 (682)
T ss_pred             EEEEcccCcchhhc
Confidence            99999999777654

>PF02469 Fasciclin: Fasciclin domain; InterPro: IPR000782 The FAS1 (fasciclin-like) domain is an extracellular module of about 140 amino acid residues

Probab=99.80  E-value=2.2e-20  Score=160.88  Aligned_cols=124  Identities=22%  Similarity=0.380  Sum_probs=90.9

Q ss_pred             CChHHHHHHHHhcCchhhhh-cCCCCCceEEEeeCcHHHhcCCCCccCCCC--CHHHHHHHhhhccccccccCCcccccC
Q 044183          211 HNFNVAASMLAASGVVEEFE-ADEGGAGITLFVPTDLAFADLPNNVKLQSL--PADKKAVVLKFHVLHSYYPLGSLESIV  287 (419)
Q Consensus       211 ~~fstf~~lL~~t~l~~~l~-~~~~~~~~TVFAPTD~AF~~L~~~~~l~~l--~~~~l~~lL~yHvvp~~~~~~~l~~~~  287 (419)
                      ++|++|.++|+++|+.+.|+ ...   .+|||||+|+||++++.. ..+.+  +.+.++++|+||++++.++.+++....
T Consensus         1 ~~~s~f~~~l~~~~l~~~l~~~~~---~~TvfaP~d~a~~~~~~~-~~~~~~~~~~~l~~~l~~hiv~~~~~~~~l~~~~   76 (128)
T PF02469_consen    1 PDLSTFSRLLEQAGLADLLNDSDG---NYTVFAPTDDAFQKLSQE-TNSSLADSKEQLKSLLKYHIVPGSITSSDLRNGK   76 (128)
T ss_dssp             -TTHHHHHHHHHTTCHHHHGCSSS---SEEEEEE-HHHHHHSHHH-HHHHHHTHHHHHHHHHHHTEEES---HCHHHCHH
T ss_pred             CCHHHHHHHHHHcCCHHHHhcCCC---CEEEEEECHHHHHhcccc-ccchhhhhhhhHhhhhhhEEEcCceehhhhcccc
Confidence            47999999999999999995 333   999999999999998533 22222  678999999999999999988887631


Q ss_pred             CCcccc-ccccccCCceEEEEEEEeCCEEEEEeCceeeEEEeecccCCCeEEEEeCccccC
Q 044183          288 NPVQPT-LATEDMGAGRFTLNISRVNGSVAIDTGLVQASVTQTVFDQNPLAIFGVSKVLLP  347 (419)
Q Consensus       288 ~~v~~T-la~~~~~~~~~~l~v~~~g~~V~v~~g~~~a~V~~~~~~~~ngvIh~ID~VL~P  347 (419)
                      ..+ +| +.+     ..+.++...+++.+.|++   .++|...++.+.||+||+||+||+|
T Consensus        77 ~~~-~t~~~g-----~~~~v~~~~~~~~~~v~~---~a~i~~~~~~~~nG~ih~id~vL~P  128 (128)
T PF02469_consen   77 QTL-ETLLNG-----QPLRVSSSPSNGTIYVNG---KARIVKSDIEASNGVIHIIDDVLIP  128 (128)
T ss_dssp             EEE-EBSSTT-----CEEEEEEEGGTTEEEECC---EEEESEEEEEESSEEEEEESS-TSS
T ss_pred             ccc-eeccCC-----CEEEEEEEecCCceEecC---ceEEEeCCEEeCCEEEEEECceECc
Confidence            134 35 433     444444442367788743   5999999999999999999999998

It has been suggested that the FAS1 domain represents an ancient cell adhesion domain common to plants and animals []; related FAS1 domains are also found in bacteria []. The crystal structure of FAS1 domains 3 and 4 of fasciclin I from Drosophila melanogaster (Fruit fly) has been determined, revealing a novel domain fold consisting of a seven-stranded beta wedge and at least five alpha helices; two well-ordered N-acetylglucosamine groups attached to a conserved asparagine are located in the interface region between the two FAS1 domains []. Fasciclin I is an insect neural cell adhesion molecule involved in axonal guidance that is attached to the membrane by a GPI-anchored protein. FAS1 domains are present in many secreted and membrane-anchored proteins. These proteins are usually GPI anchored and consist of: (i) a single FAS1 domain, (ii) a tandem array of FAS1 domains, or (iii) FAS1 domain(s) interspersed with other domains. Proteins known to contain a FAS1 domain include: Fasciclin I (4 FAS1 domains). Human TGF-beta induced Ig-H3 (BIgH3) protein (4 FAS1 domains), where the FAS1 domains mediate cell adhesion through an interaction with alpha3/beta1 integrin; mutation in the FAS1 domains result in corneal dystrophy []. Volvox major cell adhesion protein (2 FAS1 domains) []. Arabidopsis fasciclin-like arabinogalactan proteins (2 FAS1 domains) []. Mammalian stabilin protein, a family of fasciclin-like hyaluronan receptor homologues (7 FAS1 domains)[]. Human extracellular matrix protein periostin (4 FAS1 domains). Bacterial immunogenic protein MPT70 (1 FAS1 domain) []. The FAS1 domains of both human periostin (Q15063 from SWISSPROT) and BIgH3 (Q15582 from SWISSPROT) proteins were found to contain vitamin K-dependent gamma-carboxyglutamate residues []. Gamma-carboxyglutamate residues are more commonly associated with GLA domains (IPR000294 from INTERPRO), where they occur through post-translational modification catalysed by the vitamin K-dependent enzyme gamma-glutamylcarboxylase.; PDB: 1O70_A 1W7D_A 1W7E_A 1NYO_A 1X3B_A 2VXP_A.

>smart00554 FAS1 Four repeated domains in the Fasciclin I family of proteins, present in many other contexts

Probab=99.74  E-value=1.4e-18  Score=143.44  Aligned_cols=96  Identities=33%  Similarity=0.494  Sum_probs=76.2

Q ss_pred             EEEeeCcHHHhcCCCCccCCCCCHH-HHHHHhhhccccccccCCcccccCCCccccccccccCCceEEEEEEEeC--CEE
Q 044183          239 TLFVPTDLAFADLPNNVKLQSLPAD-KKAVVLKFHVLHSYYPLGSLESIVNPVQPTLATEDMGAGRFTLNISRVN--GSV  315 (419)
Q Consensus       239 TVFAPTD~AF~~L~~~~~l~~l~~~-~l~~lL~yHvvp~~~~~~~l~~~~~~v~~Tla~~~~~~~~~~l~v~~~g--~~V  315 (419)
                      |||||+|+||++++.+ .++.+..+ .++++|+|||++++++.+++.. ...+ +|+.|     .  .+.++..+  +.+
T Consensus         1 TvfaP~d~Af~~~~~~-~~~~l~~~~~l~~ll~~Hiv~~~~~~~~l~~-~~~~-~Tl~g-----~--~l~v~~~~~~~~i   70 (99)
T smart00554        1 TVFAPTDEAFQKLPPG-TLNSLLADPKLKNLLLYHVVPGRLSSADLLN-GGTL-PTLAG-----S--KLRVTRSGDSGTV   70 (99)
T ss_pred             CEeCcCHHHHHhcCHH-HHHHHhCCHHHHHHHHhcEeCceEcHHHhcc-CCcc-ccCCC-----C--EEEEEEeCCCCeE
Confidence            8999999999998754 34455433 8999999999999999998875 2334 57765     3  45666655  667


Q ss_pred             EEEeCceeeEEEeecccCCCeEEEEeCccccCC
Q 044183          316 AIDTGLVQASVTQTVFDQNPLAIFGVSKVLLPR  348 (419)
Q Consensus       316 ~v~~g~~~a~V~~~~~~~~ngvIh~ID~VL~P~  348 (419)
                      .+    ++++|+..++.++||+||+||+||+|+
T Consensus        71 ~i----n~~~v~~~di~~~nGvih~Id~vL~P~   99 (99)
T smart00554       71 TV----NGARIVEADIAATNGVVHVIDRVLLPP   99 (99)
T ss_pred             EE----cceEEEECCEecCCeEEEEECceeCCC
Confidence            76    457999999999999999999999996

>COG2335 Secreted and surface protein containing fasciclin-like repeats [Cell envelope biogenesis, outer membrane]

Probab=99.72  E-value=9.7e-18  Score=151.77  Aligned_cols=135  Identities=21%  Similarity=0.252  Sum_probs=100.1

Q ss_pred             CcCHHHHhCcCCChHHHHHHHHccCchhHHHhcCCCCeEEEEeCCcCcCCCCCCc---cccCCCHHHHHHHHHhhhhccc
Q 044183           28 ALNITDLLLPYPDLSAFSALISSTSSAVAADLSHRSSITFLAVPNSYLNSPSSLD---FTRRLSPSSLADLLRYHVLLQY  104 (419)
Q Consensus        28 a~nI~~~L~~~~~lS~f~~lL~~~~t~L~~~L~~~~~~TvfAPtN~AF~~l~~~~---~~~~~~~~~L~~lL~yHVl~~~  104 (419)
                      .++|.+...++++|++|..++..  ++|.++|++.|+||||||+|+||.+++...   .....++..|+.+|.|||+.|.
T Consensus        47 ~~~iV~~a~~~~~f~tl~~a~~a--a~Lv~~L~~~gp~TVFaPtn~AFa~lp~~T~~~Ll~pen~~~L~~iLtYHVv~Gk  124 (187)
T COG2335          47 RADIVESAANNPSFTTLVAALKA--AGLVDTLNETGPFTVFAPTNEAFAKLPAGTLDALLKPENKPLLTKILTYHVVEGK  124 (187)
T ss_pred             hhHHHHHHccCcchHHHHHHHHh--hhhHHHhcCCCCeEEecCCHHHHHhCChhHHHHHhCccchhhhheeeEEEEEcCc
Confidence            46888888899999999999999  999999999999999999999999774211   1233578999999999999999


Q ss_pred             cChhcccccCCCCceeeeeecccCCCCCCcceEEEEeCCCCCeEEEeCCCCCCCcceEEEeeeeecccceeEEeeccccc
Q 044183          105 LSWADLRKIPSSGILVTTLFQTTGRASSNFGSVNISRNPATNAIAIHSPAPYSASNATVLTLIKTLPYNITILSINSLLV  184 (419)
Q Consensus       105 ~~~~~L~~l~~~~~l~~Tl~q~tg~~~~~~g~vnit~~~~~g~v~~~s~~~g~~~~a~vv~~v~~~~~Ng~Vh~Id~vL~  184 (419)
                      ++.+++.....    +.|+   .|      ..++|....  +.+.++.        ++++.... ...||+||.||+||+
T Consensus       125 ~~~~~l~~~~~----v~t~---~G------~~~~i~~~~--~~~~Vn~--------a~v~~~di-~a~NgvIhvID~Vl~  180 (187)
T COG2335         125 ITAADLKSSGS----VKTV---QG------ADLKIKVTG--GGVYVND--------ATVTIADI-NASNGVIHVIDKVLI  180 (187)
T ss_pred             ccHHHhhcccc----ceee---cC------ceEEEEEcC--CcEEEee--------eEEEeccE-eccCcEEEEEeeecc
Confidence            99998864221    2222   11      235555443  3477642        33332211 247999999999999


Q ss_pred             cccc
Q 044183          185 PYGF  188 (419)
Q Consensus       185 P~~~  188 (419)
                      ||..
T Consensus       181 Pp~~  184 (187)
T COG2335         181 PPMD  184 (187)
T ss_pred             CCCc
Confidence            9863

>PF02469 Fasciclin: Fasciclin domain; InterPro: IPR000782 The FAS1 (fasciclin-like) domain is an extracellular module of about 140 amino acid residues

Probab=99.53  E-value=3.7e-15  Score=128.27  Aligned_cols=125  Identities=26%  Similarity=0.363  Sum_probs=83.2

Q ss_pred             CChHHHHHHHHccCchhHHHh-cCCCCeEEEEeCCcCcCCCCCCcccc--CCCHHHHHHHHHhhhhccccChhcccccCC
Q 044183           39 PDLSAFSALISSTSSAVAADL-SHRSSITFLAVPNSYLNSPSSLDFTR--RLSPSSLADLLRYHVLLQYLSWADLRKIPS  115 (419)
Q Consensus        39 ~~lS~f~~lL~~~~t~L~~~L-~~~~~~TvfAPtN~AF~~l~~~~~~~--~~~~~~L~~lL~yHVl~~~~~~~~L~~l~~  115 (419)
                      |+||+|.++|++  +++.+.| +..+.+|||||+|+||+++. .....  ..+.+.++++|+||++++.+..++|...  
T Consensus         1 ~~~s~f~~~l~~--~~l~~~l~~~~~~~TvfaP~d~a~~~~~-~~~~~~~~~~~~~l~~~l~~hiv~~~~~~~~l~~~--   75 (128)
T PF02469_consen    1 PDLSTFSRLLEQ--AGLADLLNDSDGNYTVFAPTDDAFQKLS-QETNSSLADSKEQLKSLLKYHIVPGSITSSDLRNG--   75 (128)
T ss_dssp             -TTHHHHHHHHH--TTCHHHHGCSSSSEEEEEE-HHHHHHSH-HHHHHHHHTHHHHHHHHHHHTEEES---HCHHHCH--
T ss_pred             CCHHHHHHHHHH--cCCHHHHhcCCCCEEEEEECHHHHHhcc-ccccchhhhhhhhHhhhhhhEEEcCceehhhhccc--
Confidence            789999999999  9999999 77799999999999998541 00111  1278899999999999999988887632  


Q ss_pred             CCceeeeeecccCCCCCCcceEEEEeCCCCCeEEEeCCCCCCCcceEEEeeeeecccceeEEeecccccc
Q 044183          116 SGILVTTLFQTTGRASSNFGSVNISRNPATNAIAIHSPAPYSASNATVLTLIKTLPYNITILSINSLLVP  185 (419)
Q Consensus       116 ~~~l~~Tl~q~tg~~~~~~g~vnit~~~~~g~v~~~s~~~g~~~~a~vv~~v~~~~~Ng~Vh~Id~vL~P  185 (419)
                       ...+.|.+  .    +  ..+.++...+++.+.+.+       .+.+++... ...||.||.||+||+|
T Consensus        76 -~~~~~t~~--~----g--~~~~v~~~~~~~~~~v~~-------~a~i~~~~~-~~~nG~ih~id~vL~P  128 (128)
T PF02469_consen   76 -KQTLETLL--N----G--QPLRVSSSPSNGTIYVNG-------KARIVKSDI-EASNGVIHIIDDVLIP  128 (128)
T ss_dssp             -HEEEEBSS--T----T--CEEEEEEEGGTTEEEECC-------EEEESEEEE-EESSEEEEEESS-TSS
T ss_pred             -cccceecc--C----C--CEEEEEEEecCCceEecC-------ceEEEeCCE-EeCCEEEEEECceECc
Confidence             12233321  1    1  245555553227788743       355554322 4579999999999987

It has been suggested that the FAS1 domain represents an ancient cell adhesion domain common to plants and animals []; related FAS1 domains are also found in bacteria []. The crystal structure of FAS1 domains 3 and 4 of fasciclin I from Drosophila melanogaster (Fruit fly) has been determined, revealing a novel domain fold consisting of a seven-stranded beta wedge and at least five alpha helices; two well-ordered N-acetylglucosamine groups attached to a conserved asparagine are located in the interface region between the two FAS1 domains []. Fasciclin I is an insect neural cell adhesion molecule involved in axonal guidance that is attached to the membrane by a GPI-anchored protein. FAS1 domains are present in many secreted and membrane-anchored proteins. These proteins are usually GPI anchored and consist of: (i) a single FAS1 domain, (ii) a tandem array of FAS1 domains, or (iii) FAS1 domain(s) interspersed with other domains. Proteins known to contain a FAS1 domain include: Fasciclin I (4 FAS1 domains). Human TGF-beta induced Ig-H3 (BIgH3) protein (4 FAS1 domains), where the FAS1 domains mediate cell adhesion through an interaction with alpha3/beta1 integrin; mutation in the FAS1 domains result in corneal dystrophy []. Volvox major cell adhesion protein (2 FAS1 domains) []. Arabidopsis fasciclin-like arabinogalactan proteins (2 FAS1 domains) []. Mammalian stabilin protein, a family of fasciclin-like hyaluronan receptor homologues (7 FAS1 domains)[]. Human extracellular matrix protein periostin (4 FAS1 domains). Bacterial immunogenic protein MPT70 (1 FAS1 domain) []. The FAS1 domains of both human periostin (Q15063 from SWISSPROT) and BIgH3 (Q15582 from SWISSPROT) proteins were found to contain vitamin K-dependent gamma-carboxyglutamate residues []. Gamma-carboxyglutamate residues are more commonly associated with GLA domains (IPR000294 from INTERPRO), where they occur through post-translational modification catalysed by the vitamin K-dependent enzyme gamma-glutamylcarboxylase.; PDB: 1O70_A 1W7D_A 1W7E_A 1NYO_A 1X3B_A 2VXP_A.

>KOG1437 consensus Fasciclin and related adhesion glycoproteins [Cell wall/membrane/envelope biogenesis; Extracellular structures]

Probab=99.51  E-value=2.3e-14  Score=152.47  Aligned_cols=149  Identities=19%  Similarity=0.243  Sum_probs=111.8

Q ss_pred             ccceeEEeeccccccccccccccCCCCCchhhHHHHHhcCCChHHHHHHHHhcCchhhhhcCCCCCceEEEeeCcHHHhc
Q 044183          171 PYNITILSINSLLVPYGFDLMASETRPPLGLNITKALIDGHNFNVAASMLAASGVVEEFEADEGGAGITLFVPTDLAFAD  250 (419)
Q Consensus       171 ~~Ng~Vh~Id~vL~P~~~~~~~~~~~~~~~~nlt~~L~~~~~fstf~~lL~~t~l~~~l~~~~~~~~~TVFAPTD~AF~~  250 (419)
                      ..|+.||.||.++.|+..            .+++++. ...+.+++.+++.+-++.+.|...+   .+|+|+|+|+||++
T Consensus       356 ~~~~~lh~id~~l~p~~~------------~~l~~La-~e~~~st~~rlv~elgll~~L~~n~---e~t~~lp~n~~fd~  419 (682)
T KOG1437|consen  356 HTNGLLHYIDYVLEPDSL------------KNLMSLA-REDEISTSMRLVAELGLLTALAPND---EATLLLPTNNLFDD  419 (682)
T ss_pred             ccceEEEEcccccCCchH------------HHHHHHH-hcccccHHHHHHHhccceEEEcCCC---ceEEeeehhhhccC
Confidence            445889999999988632            5788887 6778999999999999999776655   59999999999999


Q ss_pred             CCCCccCCCCCHHHHHHHhhhccccccccCCcccccCCCccccccccccCCceEEEEEEEeCCEE---EEEeCceeeEEE
Q 044183          251 LPNNVKLQSLPADKKAVVLKFHVLHSYYPLGSLESIVNPVQPTLATEDMGAGRFTLNISRVNGSV---AIDTGLVQASVT  327 (419)
Q Consensus       251 L~~~~~l~~l~~~~l~~lL~yHvvp~~~~~~~l~~~~~~v~~Tla~~~~~~~~~~l~v~~~g~~V---~v~~g~~~a~V~  327 (419)
                      +...     +...-++++|+||+++.+...++.....+-+ +|+.+     .++..-+.+..++.   .+..|. .+.|.
T Consensus       420 ~~~~-----~~r~l~~qIL~~HII~~~~~~~~~y~~~~~v-~t~g~-----~~l~~fv~r~~~s~~~t~i~~~~-~~~Ii  487 (682)
T KOG1437|consen  420 LTPL-----ESRRLAEQILYNHIIPEYLTSSSMYNGQTTV-RTLGK-----NKLLYFVYRHSVSANVTDILIGN-EACII  487 (682)
T ss_pred             CChh-----hhHHHHHHHHHHhCcchhhhhhhhhccccee-eccCC-----eEEEEEEecccccccceeeeccc-eeeEE
Confidence            7642     1222378999999999999988887644345 35543     44444444432221   222232 49999


Q ss_pred             eecccCCCeEEEEeCccccC
Q 044183          328 QTVFDQNPLAIFGVSKVLLP  347 (419)
Q Consensus       328 ~~~~~~~ngvIh~ID~VL~P  347 (419)
                      ..|+..+||+||.||+||.|
T Consensus       488 ~aDi~~~nGvvH~id~vl~p  507 (682)
T KOG1437|consen  488 EADISVKNGVVHIIDRVLDP  507 (682)
T ss_pred             ecccceecCceEEeeEEcCc
Confidence            99999999999999999999

>smart00554 FAS1 Four repeated domains in the Fasciclin I family of proteins, present in many other contexts

Probab=99.19  E-value=1.2e-11  Score=102.04  Aligned_cols=97  Identities=25%  Similarity=0.340  Sum_probs=63.0

Q ss_pred             EEEEeCCcCcCCCCCCccccC--CCHHHHHHHHHhhhhccccChhcccccCCCCceeeeeecccCCCCCCcceEEEEeCC
Q 044183           66 TFLAVPNSYLNSPSSLDFTRR--LSPSSLADLLRYHVLLQYLSWADLRKIPSSGILVTTLFQTTGRASSNFGSVNISRNP  143 (419)
Q Consensus        66 TvfAPtN~AF~~l~~~~~~~~--~~~~~L~~lL~yHVl~~~~~~~~L~~l~~~~~l~~Tl~q~tg~~~~~~g~vnit~~~  143 (419)
                      |||||+|+||+++.. .....  .++ .++++|+||++++++..++|..    +..++|+.   |      ..+.++...
T Consensus         1 TvfaP~d~Af~~~~~-~~~~~l~~~~-~l~~ll~~Hiv~~~~~~~~l~~----~~~~~Tl~---g------~~l~v~~~~   65 (99)
T smart00554        1 TVFAPTDEAFQKLPP-GTLNSLLADP-KLKNLLLYHVVPGRLSSADLLN----GGTLPTLA---G------SKLRVTRSG   65 (99)
T ss_pred             CEeCcCHHHHHhcCH-HHHHHHhCCH-HHHHHHHhcEeCceEcHHHhcc----CCccccCC---C------CEEEEEEeC
Confidence            899999999996531 11111  223 8999999999999999988863    23345542   2      235565543


Q ss_pred             CCCeEEEeCCCCCCCcceEEEeeeeecccceeEEeeccccccc
Q 044183          144 ATNAIAIHSPAPYSASNATVLTLIKTLPYNITILSINSLLVPY  186 (419)
Q Consensus       144 ~~g~v~~~s~~~g~~~~a~vv~~v~~~~~Ng~Vh~Id~vL~P~  186 (419)
                      +.+.+.++.        +.+++... ...||+||.||+||+|+
T Consensus        66 ~~~~i~in~--------~~v~~~di-~~~nGvih~Id~vL~P~   99 (99)
T smart00554       66 DSGTVTVNG--------ARIVEADI-AATNGVVHVIDRVLLPP   99 (99)
T ss_pred             CCCeEEEcc--------eEEEECCE-ecCCeEEEEECceeCCC
Confidence            214565532        24444322 24699999999999985

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	419
1o70_A	324	Fasciclin I, FAS I, FCN; cell adhesion, AXON guida	5e-12
2vxp_A	132	Transforming growth factor-beta-induced protein IG	2e-07
1nyo_A	163	Immunogenic protein MPT70; seven-stranded beta-bar	3e-07
1w7d_A	137	Fasciclin-like protein; cell adhesion; NMR {Rhodob	1e-05

>1o70_A Fasciclin I, FAS I, FCN; cell adhesion, AXON guidance, extracellular module, genetic disorder, corneal dystrophy; HET: NAG; 2.6A {Drosophila melanogaster} SCOP: b.118.1.1 b.118.1.1 Length = 324

 Score = 65.8 bits (160), Expect = 5e-12
 Identities = 46/343 (13%), Positives = 96/343 (27%), Gaps = 56/343 (16%)

Query: 22  TTPPILALNITDLLLPYPDLSAFSALISSTSSAVAADLSHRSSITFLAVPNSYLNSPS-- 79
           TT      +  +       L  F  +I     AV  D++  + +T LA        PS  
Sbjct: 6   TTVTQFLQSFKENAEN-GALRKFYEVIMDNGGAVLDDINSLTEVTILA--------PSNE 56

Query: 80  ----SLDFTRRLSPSSLADLLRYHVLLQYLSWADLRKIPSSGILVTTLFQTTGRASSNFG 135
               S         + +  +L  H++   L+   +R+          + Q     ++ F 
Sbjct: 57  AWNSSNINNVLRDRNKMRQILNMHIIKDRLNVDKIRQKN-----ANLIAQVPTVNNNTFL 111

Query: 136 SVNISRNPATNAIAIHSPAPYSASNATVLTL-IKTLPYNITILSINSLLVPYGFDLMASE 194
             N+    +   I +         NATV+   +     N  +  I+ +L      ++   
Sbjct: 112 YFNVRGEGSDTVITVEG----GGVNATVIQADVAQ--TNGYVHIIDHVLGVPYTTVLGKL 165

Query: 195 TRPPLGLNITKALIDGHNFNVAASMLAASGVVEEFEADEGGAGITLFVPTDLAFADLPNN 254
              P               +    M   S   ++    +     T FVP D  +     +
Sbjct: 166 ESDP-------------MMSDTYKMGKFSHFNDQLNNTQRR--FTYFVPRDKGWQKTELD 210

Query: 255 V------KLQSLPADKKAVVLKFHVLHSYYPLGSLESIVNPVQPTLATEDMGAGRFTLNI 308
                     +  +     +L+ H+  S       + +    +             ++ +
Sbjct: 211 YPSAHKKLFMADFSYHSKSILERHLAISDKEYTMKDLVKFSQESGSVILPTFRDSLSIRV 270

Query: 309 SRVNGSVAIDTGLVQASVTQTVFDQNPLA----IFGVSKVLLP 347
               G   I     + +V +     +       I  +   LL 
Sbjct: 271 EEEAGRYVIIWNYKKINVYRP----DVECTNGIIHVIDYPLLE 309

>2vxp_A Transforming growth factor-beta-induced protein IG-H3; RGD-containing collagen-associated protein, FAS1, BIGH3, vision, amyloid, RGD-CAP, secreted; 2.5A {Homo sapiens} PDB: 1x3b_A Length = 132

 Score = 48.8 bits (117), Expect = 2e-07
 Identities = 25/130 (19%), Positives = 49/130 (37%), Gaps = 19/130 (14%)

Query: 202 NITKALIDGHNFNVAASMLAASGVVEEFEADEGGAGITLFVPTDLAFADLPNNVKLQSLP 261
            +   L   + F++  + + ++G+ E           T+F PT+ AF  LP       L 
Sbjct: 3   TVMDVLKGDNRFSMLVAAIQSAGLTETLN---REGVYTVFAPTNEAFRALPPRE-RSRLL 58

Query: 262 ADKKAV--VLKFHVLHSYYPLGSLESIVNPVQPTLATEDMGAGRFTLNISRVNGSVAIDT 319
            D K +  +LK+H+       G + +       +L  +        L +S  N  V+++ 
Sbjct: 59  GDAKELANILKYHIGDEILVSGGIGA--LVRLKSLQGD-------KLEVSLKNNVVSVNK 109

Query: 320 GLVQASVTQT 329
                 V + 
Sbjct: 110 ----EPVAEP 115

>1nyo_A Immunogenic protein MPT70; seven-stranded beta-barrel, fasciclin domain, structural genomics, PSI, protein structure initiative; NMR {Mycobacterium tuberculosis} SCOP: b.118.1.1 Length = 163

 Score = 49.0 bits (117), Expect = 3e-07
 Identities = 22/135 (16%), Positives = 52/135 (38%), Gaps = 22/135 (16%)

Query: 215 VAASMLAASGVVEEFEADEGGAGITLFVPTDLAFADLPNNVKLQSLPADKKAV--VLKFH 272
           ++  +     +V+   + +     T+F PT+ AF+ LP +  +  L  +   +  +L +H
Sbjct: 47  LSGQLNPQVNLVDTLNSGQ----YTVFAPTNAAFSKLPAST-IDELKTNSSLLTSILTYH 101

Query: 273 VLHSYYPLGSLESIVNPVQPTLATEDMGAGRFTLNISRVNGSVAIDTGLVQASVTQTVFD 332
           V+       ++      +Q        GA   ++ ++    S+ +      A V      
Sbjct: 102 VVAGQTSPANVVGTRQTLQ--------GA---SVTVTGQGNSLKVGN----ADVVCGGVS 146

Query: 333 QNPLAIFGVSKVLLP 347
                ++ +  VL+P
Sbjct: 147 TANATVYMIDSVLMP 161

>1w7d_A Fasciclin-like protein; cell adhesion; NMR {Rhodobacter sphaeroides} PDB: 1w7e_A Length = 137

 Score = 43.5 bits (103), Expect = 1e-05
 Identities = 32/149 (21%), Positives = 56/149 (37%), Gaps = 20/149 (13%)

Query: 202 NITKALIDGHNFNVAASMLAASGVVEEFEADEGGAGITLFVPTDLAFADLPNNVKLQSLP 261
           +I +      +F    +   A+G+V+  + D      T+F PTD AFA LP       L 
Sbjct: 4   DIVETATGAGSFTTLLTAAEAAGLVDTLKGDGP---FTVFAPTDAAFAALPEGTVEDLLK 60

Query: 262 ADKKAV---VLKFHVLHSYYPLGSLESIVNPVQPTLATEDMGAGRFTLNISRVNGSVAID 318
            + K     +L +HV+        L         T+           L ++ + G   ++
Sbjct: 61  PENKEKLTEILTYHVVPGEVMSSDLTE--GMTAETVEGG-------ALTVT-LEGGPKVN 110

Query: 319 TGLVQASVTQTVFDQNPLAIFGVSKVLLP 347
                 S++Q   D +   I  +  VL+P
Sbjct: 111 G----VSISQPDVDASNGVIHVIDGVLMP 135

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	419
1o70_A	324	Fasciclin I, FAS I, FCN; cell adhesion, AXON guida	100.0
1w7d_A	137	Fasciclin-like protein; cell adhesion; NMR {Rhodob	99.92
2vxp_A	132	Transforming growth factor-beta-induced protein IG	99.92
1nyo_A	163	Immunogenic protein MPT70; seven-stranded beta-bar	99.91
1o70_A	324	Fasciclin I, FAS I, FCN; cell adhesion, AXON guida	99.84
1w7d_A	137	Fasciclin-like protein; cell adhesion; NMR {Rhodob	99.79
2vxp_A	132	Transforming growth factor-beta-induced protein IG	99.75
1nyo_A	163	Immunogenic protein MPT70; seven-stranded beta-bar	99.74

>1o70_A Fasciclin I, FAS I, FCN; cell adhesion, AXON guidance, extracellular module, genetic disorder, corneal dystrophy; HET: NAG; 2.6A {Drosophila melanogaster} SCOP: b.118.1.1 b.118.1.1

Probab=100.00  E-value=1.8e-44  Score=358.42  Aligned_cols=289  Identities=17%  Similarity=0.180  Sum_probs=211.2

Q ss_pred             CCCcCHHHHhC------cCCChHHHHHHHHccCch--hHHHhcCCCCeEEEEeCCcCcCCCCCCccccCCCHHHHHHHHH
Q 044183           26 ILALNITDLLL------PYPDLSAFSALISSTSSA--VAADLSHRSSITFLAVPNSYLNSPSSLDFTRRLSPSSLADLLR   97 (419)
Q Consensus        26 ~~a~nI~~~L~------~~~~lS~f~~lL~~~~t~--L~~~L~~~~~~TvfAPtN~AF~~l~~~~~~~~~~~~~L~~lL~   97 (419)
                      +...||+++|+      ++++||+|.++|++  ++  |.++|++.++||||||+|+||+++. ...+ ..+++.|+++|+
T Consensus         3 ~~~~~i~~~L~~~~~~~~~~~~s~~~~~l~~--ag~~l~~~L~~~~~~TvFAPtn~Af~~~~-~~~l-~~~~~~l~~iL~   78 (324)
T 1o70_A            3 AADTTVTQFLQSFKENAENGALRKFYEVIMD--NGGAVLDDINSLTEVTILAPSNEAWNSSN-INNV-LRDRNKMRQILN   78 (324)
T ss_dssp             ----------------CCHHHHHHHHHHHHH--TCSHHHHHHHTCSSEEEEEECHHHHHHTC-THHH-HTCHHHHHHHHH
T ss_pred             eehhhHHHHHHHHHhhhcCCcHHHHHHHHHH--HhHHHHHHHcCCCCeEEEEEChHhhhccc-Hhhh-hCCHHHHHHHHH
Confidence            45678999998      68999999999999  88  9999999999999999999998431 1111 137899999999


Q ss_pred             hhhhccccChhcccccCCCC-ceeeeeecccCCCCCCcceEEEEeCCCCCeEEEeCCCCCCCcceEEEeeeeecccceeE
Q 044183           98 YHVLLQYLSWADLRKIPSSG-ILVTTLFQTTGRASSNFGSVNISRNPATNAIAIHSPAPYSASNATVLTLIKTLPYNITI  176 (419)
Q Consensus        98 yHVl~~~~~~~~L~~l~~~~-~l~~Tl~q~tg~~~~~~g~vnit~~~~~g~v~~~s~~~g~~~~a~vv~~v~~~~~Ng~V  176 (419)
                      |||+++++..++|.....++ ..++|+...      ...+++++...+++.+.+..    +..++++++... ...||+|
T Consensus        79 yHvv~g~~~~~~l~~~~~~~~~~~~Tl~g~------~~l~~~v~~~~~~~~v~v~~----g~~~a~v~~~di-~~~NGvI  147 (324)
T 1o70_A           79 MHIIKDRLNVDKIRQKNANLIAQVPTVNNN------TFLYFNVRGEGSDTVITVEG----GGVNATVIQADV-AQTNGYV  147 (324)
T ss_dssp             HTEESSCCCHHHHHHHTSSSCCCEEBSSTT------CEEEEEEESCGGGCEEEEEE----TTEEEEEEEEEE-ECSSEEE
T ss_pred             hcEeCCeecHHHHhhccCCCceEEEcCCCC------ceEEEEEeecCCceEEEEcC----CceeEEEEeccc-cccCcEE
Confidence            99999999999987654221 245665421      11345655321114576643    233577776522 3579999


Q ss_pred             EeeccccccccccccccCCCCCchhhHHHHHhcCCChHHHHHHHHhcCchhhhhcCCCCCceEEEeeCcHHHhcCC----
Q 044183          177 LSINSLLVPYGFDLMASETRPPLGLNITKALIDGHNFNVAASMLAASGVVEEFEADEGGAGITLFVPTDLAFADLP----  252 (419)
Q Consensus       177 h~Id~vL~P~~~~~~~~~~~~~~~~nlt~~L~~~~~fstf~~lL~~t~l~~~l~~~~~~~~~TVFAPTD~AF~~L~----  252 (419)
                      |.||+||.||.             .++.++|+..++|++|.++++++|+.++|++..  .+||||||||+||++++    
T Consensus       148 hvID~VL~pp~-------------~ti~~~l~~~~~fs~~~~~l~~~gl~~~L~~~~--~~~TvFAPtd~Af~~l~~~~~  212 (324)
T 1o70_A          148 HIIDHVLGVPY-------------TTVLGKLESDPMMSDTYKMGKFSHFNDQLNNTQ--RRFTYFVPRDKGWQKTELDYP  212 (324)
T ss_dssp             EEESSCTTSCC-------------SCHHHHHHHCGGGHHHHHHTTTTTTTGGGGCSS--SEEEEEEECHHHHHHHHHHCH
T ss_pred             EEEchhhhhch-------------hhHHHHhhcCchHHHHHHHHHhhCHHHHhCCCC--CCeEEEEeChHHHHhhhhhch
Confidence            99999999863             378999988999999999999999999998422  28999999999999974    


Q ss_pred             CCccCCCCC---HHHHHHHhhhccccc--cccCCcccccCC-----CccccccccccCCceEEEEEEEeCCEEEEEeCce
Q 044183          253 NNVKLQSLP---ADKKAVVLKFHVLHS--YYPLGSLESIVN-----PVQPTLATEDMGAGRFTLNISRVNGSVAIDTGLV  322 (419)
Q Consensus       253 ~~~~l~~l~---~~~l~~lL~yHvvp~--~~~~~~l~~~~~-----~v~~Tla~~~~~~~~~~l~v~~~g~~V~v~~g~~  322 (419)
                      .+ .++.+.   .++++++|+|||+++  +|+.++|.+..+     .+ +|+.      +.+.+++...|+.+.|+.+.+
T Consensus       213 ~~-~~~~l~~~~~~~l~~iL~yHvv~~~~~~~~~~l~~~~~~~~~~~~-~Tl~------~~l~v~~~~~~~~v~v~~~~~  284 (324)
T 1o70_A          213 SA-HKKLFMADFSYHSKSILERHLAISDKEYTMKDLVKFSQESGSVIL-PTFR------DSLSIRVEEEAGRYVIIWNYK  284 (324)
T ss_dssp             HH-HHHHTSGGGHHHHHHHHHTTEEEESSCCCHHHHHHHHHHSSSEEE-ECSS------SEEEEEEEEETTEEEEEETTE
T ss_pred             hH-HHHHhccCcHHHHHHHHHhcEeCCcceEcHHHHhhhccCCCeeee-eccC------CcEEEEEEecCCEEEEEecCc
Confidence            22 223332   258999999999998  888788875322     13 3543      457777777788999987667


Q ss_pred             eeEEEeecccCCCeEEEEeCccccCCCCcC
Q 044183          323 QASVTQTVFDQNPLAIFGVSKVLLPREIFG  352 (419)
Q Consensus       323 ~a~V~~~~~~~~ngvIh~ID~VL~P~~~f~  352 (419)
                      +++|+.+++.+.||+||+||+||+|++...
T Consensus       285 ~a~v~~~di~~~NGvIHvID~VL~P~~~~~  314 (324)
T 1o70_A          285 KINVYRPDVECTNGIIHVIDYPLLEEKDVV  314 (324)
T ss_dssp             EEEEEEEEEEETTEEEEEESSCSCCTTTTC
T ss_pred             eeEEEEcccccCCCeEEEeceeecCCcccc
Confidence            899999999999999999999999997653

>1w7d_A Fasciclin-like protein; cell adhesion; NMR {Rhodobacter sphaeroides} PDB: 1w7e_A

Probab=99.92  E-value=1.2e-26  Score=202.75  Aligned_cols=131  Identities=25%  Similarity=0.382  Sum_probs=111.4

Q ss_pred             hhHHHHHhcCCChHHHHHHHHhcCchhhhhcCCCCCceEEEeeCcHHHhcCCCCccCCCC----CHHHHHHHhhhccccc
Q 044183          201 LNITKALIDGHNFNVAASMLAASGVVEEFEADEGGAGITLFVPTDLAFADLPNNVKLQSL----PADKKAVVLKFHVLHS  276 (419)
Q Consensus       201 ~nlt~~L~~~~~fstf~~lL~~t~l~~~l~~~~~~~~~TVFAPTD~AF~~L~~~~~l~~l----~~~~l~~lL~yHvvp~  276 (419)
                      .||.++|+..++|++|.++|+++|+.+.|++.+   +||||||||+||++++.+ .++.+    ++++++++|+|||+++
T Consensus         3 ~~i~~~l~~~~~~s~f~~~l~~agl~~~L~~~~---~~TvFAPtn~Af~~l~~~-~~~~l~~~~~~~~l~~lL~yHvv~~   78 (137)
T 1w7d_A            3 GDIVETATGAGSFTTLLTAAEAAGLVDTLKGDG---PFTVFAPTDAAFAALPEG-TVEDLLKPENKEKLTEILTYHVVPG   78 (137)
T ss_dssp             STTGGGGGSCSSSTTTTHHHHHTTTHHHHTSSS---CEEEECCCHHHHTTSTTT-HHHHTTSHHHHHHHHHHHHHHEEES
T ss_pred             CCHHHHHHhCCCHHHHHHHHHHcCCHHHHcCCC---CEEEEEECHHHHHHcCHh-HHHHHhCcCCHHHHHHHHHhhEeCc
Confidence            478899988999999999999999999998765   999999999999999876 55555    5788999999999999


Q ss_pred             cccCCcccccCCCccccccccccCCceEEEEEEEeCCEEEEEeCceeeEEEeecccCCCeEEEEeCccccCCC
Q 044183          277 YYPLGSLESIVNPVQPTLATEDMGAGRFTLNISRVNGSVAIDTGLVQASVTQTVFDQNPLAIFGVSKVLLPRE  349 (419)
Q Consensus       277 ~~~~~~l~~~~~~v~~Tla~~~~~~~~~~l~v~~~g~~V~v~~g~~~a~V~~~~~~~~ngvIh~ID~VL~P~~  349 (419)
                      .++.+++... ..+ +|+.|     +  .++|+..+| +.|    ++++|+..|+.+.||+||+||+||+|+.
T Consensus        79 ~~~~~~l~~~-~~~-~tl~G-----~--~l~v~~~~g-v~v----n~a~v~~~di~~~NGvIHvID~VL~P~s  137 (137)
T 1w7d_A           79 EVMSSDLTEG-MTA-ETVEG-----G--ALTVTLEGG-PKV----NGVSISQPDVDASNGVIHVIDGVLMPGA  137 (137)
T ss_dssp             CCCTTTSCSS-EEE-ECTTS-----C--EEEEECTTS-CEE----TTEECSBCCCBCSSSEEEBCSSCCSSCC
T ss_pred             EEcHHHhcCC-Cee-eccCC-----c--eEEEEecCC-EEE----eCcEEEECCeecCCeEEEEECeeeCCCC
Confidence            9999998752 234 47765     3  577777777 777    3489999999999999999999999973

>2vxp_A Transforming growth factor-beta-induced protein IG-H3; RGD-containing collagen-associated protein, FAS1, BIGH3, vision, amyloid, RGD-CAP, secreted; 2.5A {Homo sapiens} PDB: 1x3b_A

Probab=99.92  E-value=1.7e-25  Score=194.24  Aligned_cols=128  Identities=21%  Similarity=0.345  Sum_probs=107.9

Q ss_pred             hHHHHHhcCCChHHHHHHHHhcCchhhhhcCCCCCceEEEeeCcHHHhcCCCCccCCCC--CHHHHHHHhhhcccccccc
Q 044183          202 NITKALIDGHNFNVAASMLAASGVVEEFEADEGGAGITLFVPTDLAFADLPNNVKLQSL--PADKKAVVLKFHVLHSYYP  279 (419)
Q Consensus       202 nlt~~L~~~~~fstf~~lL~~t~l~~~l~~~~~~~~~TVFAPTD~AF~~L~~~~~l~~l--~~~~l~~lL~yHvvp~~~~  279 (419)
                      +|.++|+.+++|++|.++++++|+.+.|++.+   +||||||||+||++++.+ .++.+  ++++++++|+|||+++.++
T Consensus         3 ti~~~l~~~~~fs~~~~~l~~agl~~~L~~~~---~~TvFAPtn~Af~~l~~~-~~~~l~~~~~~l~~iL~yHvv~~~~~   78 (132)
T 2vxp_A            3 TVMDVLKGDNRFSMLVAAIQSAGLTETLNREG---VYTVFAPTNEAFRALPPR-ERSRLLGDAKELANILKYHIGDEILV   78 (132)
T ss_dssp             CHHHHHTTSTTCHHHHHHHHHHTCHHHHHSSC---CEEEEEECHHHHHHSCHH-HHHHHHTCHHHHHHHHHHSBBSSCCC
T ss_pred             cHHHHHHcCCCHHHHHHHHHHcCcHHHHcCCC---CEEEEeECHHHHHhhCHH-HHHHHhcCHHHHHHHHHhcCcCceee
Confidence            78999988999999999999999999998765   999999999999999865 44433  7889999999999999988


Q ss_pred             CCcccccCCCccccccccccCCceEEEEEEEeCCEEEEEeCceeeEEEeecccCCCeEEEEeCcccc
Q 044183          280 LGSLESIVNPVQPTLATEDMGAGRFTLNISRVNGSVAIDTGLVQASVTQTVFDQNPLAIFGVSKVLL  346 (419)
Q Consensus       280 ~~~l~~~~~~v~~Tla~~~~~~~~~~l~v~~~g~~V~v~~g~~~a~V~~~~~~~~ngvIh~ID~VL~  346 (419)
                      .+++.. ...+ +|+.|     +  .++|+..++.+.|    ++++|+.+|+.+.||+||+||+||+
T Consensus        79 ~~~l~~-~~~~-~tl~G-----~--~l~v~~~~~~v~v----n~a~v~~~di~a~NGvIHvID~VLl  132 (132)
T 2vxp_A           79 SGGIGA-LVRL-KSLQG-----D--KLEVSLKNNVVSV----NKEPVAEPDIMATNGVVHVITNVLQ  132 (132)
T ss_dssp             STTCSS-CEEE-EBTTS-----S--EEEEEEETTEEEE----SSCBEEEEEEEETTEEEEEESSCC-
T ss_pred             hhhccC-CceE-ecCCC-----C--EEEEEEeCCEEEE----eccEEEEcceecCCEEEEEECcEeC
Confidence            888764 2234 47765     3  5777888888887    3489999999999999999999995

>1nyo_A Immunogenic protein MPT70; seven-stranded beta-barrel, fasciclin domain, structural genomics, PSI, protein structure initiative; NMR {Mycobacterium tuberculosis} SCOP: b.118.1.1

Probab=99.91  E-value=1.7e-25  Score=201.26  Aligned_cols=130  Identities=18%  Similarity=0.314  Sum_probs=110.9

Q ss_pred             hhhHHHHHhcCCChHHHHHHHH-----hcCchhhhhcCCCCCceEEEeeCcHHHhcCCCCccCCCC--CHHHHHHHhhhc
Q 044183          200 GLNITKALIDGHNFNVAASMLA-----ASGVVEEFEADEGGAGITLFVPTDLAFADLPNNVKLQSL--PADKKAVVLKFH  272 (419)
Q Consensus       200 ~~nlt~~L~~~~~fstf~~lL~-----~t~l~~~l~~~~~~~~~TVFAPTD~AF~~L~~~~~l~~l--~~~~l~~lL~yH  272 (419)
                      ..+|.++|++.++|++|.++|+     ++|+.+.|++.    +||||||||+||++++.+ .++.|  ++++|+++|+||
T Consensus        27 ~~~i~~~l~~~~~~s~f~~~l~~~~~~~agl~~~L~~~----g~TvFAPtn~AF~~l~~~-~~~~L~~~~~~L~~iL~yH  101 (163)
T 1nyo_A           27 QDPVAVAASNNPELTTLTAALSGQLNPQVNLVDTLNSG----QYTVFAPTNAAFSKLPAS-TIDELKTNSSLLTSILTYH  101 (163)
T ss_dssp             HSCHHHHHTTSTTTHHHHHHHHSSSCTTCCCHHHHTSS----SEEECCBCHHHHHHSCHH-HHHHHTTCSSHHHHHHHHT
T ss_pred             CcCHHHHHHhCCCHHHHHHHHHhccccccCHHHHhCCC----CcEEEEECHHHHHhccHH-HHHHHhcCHHHHHHHHHhc
Confidence            3589999988999999999999     99999999764    499999999999999865 44443  567899999999


Q ss_pred             cccccccCCcccccCCCccccccccccCCceEEEEEEEeCCEEEEEeCceeeEEEeecccCCCeEEEEeCccccCCC
Q 044183          273 VLHSYYPLGSLESIVNPVQPTLATEDMGAGRFTLNISRVNGSVAIDTGLVQASVTQTVFDQNPLAIFGVSKVLLPRE  349 (419)
Q Consensus       273 vvp~~~~~~~l~~~~~~v~~Tla~~~~~~~~~~l~v~~~g~~V~v~~g~~~a~V~~~~~~~~ngvIh~ID~VL~P~~  349 (419)
                      |+++.++.++|.   +.+ +|+.|     .  .|+|+..++.|.|    ++++|+..|+.+.||+||+||+||+|+.
T Consensus       102 vv~g~~~~~~l~---g~~-~Tl~G-----~--~l~v~~~~~~v~v----n~a~V~~~di~a~NGvIHvID~VL~P~~  163 (163)
T 1nyo_A          102 VVAGQTSPANVV---GTR-QTLQG-----A--SVTVTGQGNSLKV----GNADVVCGGVSTANATVYMIDSVLMPPA  163 (163)
T ss_dssp             EEESCCCTTTSC---EEE-ECTTS-----S--EEEEEECSSCEEE----TTEECSSBCCCCSSEEEBCBSSCCCCCC
T ss_pred             eECCEEcHHHhC---Ccc-ccCCC-----C--EEEEEEECCEEEE----eccEEEECceEcCCEEEEEECcEeCCCC
Confidence            999999999886   456 58765     3  6778887888887    3489999999999999999999999973

>1o70_A Fasciclin I, FAS I, FCN; cell adhesion, AXON guidance, extracellular module, genetic disorder, corneal dystrophy; HET: NAG; 2.6A {Drosophila melanogaster} SCOP: b.118.1.1 b.118.1.1

Probab=99.84  E-value=2.1e-21  Score=192.34  Aligned_cols=138  Identities=17%  Similarity=0.257  Sum_probs=105.0

Q ss_pred             hhHHHHHh------cCCChHHHHHHHHhcC--chhhhhcCCCCCceEEEeeCcHHHhcCCCCccCCCCCHHHHHHHhhhc
Q 044183          201 LNITKALI------DGHNFNVAASMLAASG--VVEEFEADEGGAGITLFVPTDLAFADLPNNVKLQSLPADKKAVVLKFH  272 (419)
Q Consensus       201 ~nlt~~L~------~~~~fstf~~lL~~t~--l~~~l~~~~~~~~~TVFAPTD~AF~~L~~~~~l~~l~~~~l~~lL~yH  272 (419)
                      .||+++|+      +.++|++|.++|+++|  +.+.|++.+   +||||||+|+||+++... .+. .+++.++++|+||
T Consensus         6 ~~i~~~L~~~~~~~~~~~~s~~~~~l~~ag~~l~~~L~~~~---~~TvFAPtn~Af~~~~~~-~l~-~~~~~l~~iL~yH   80 (324)
T 1o70_A            6 TTVTQFLQSFKENAENGALRKFYEVIMDNGGAVLDDINSLT---EVTILAPSNEAWNSSNIN-NVL-RDRNKMRQILNMH   80 (324)
T ss_dssp             -------------CCHHHHHHHHHHHHHTCSHHHHHHHTCS---SEEEEEECHHHHHHTCTH-HHH-TCHHHHHHHHHHT
T ss_pred             hhHHHHHHHHHhhhcCCcHHHHHHHHHHHhHHHHHHHcCCC---CeEEEEEChHhhhcccHh-hhh-CCHHHHHHHHHhc
Confidence            57888886      5789999999999999  999998765   999999999999886422 221 2788999999999


Q ss_pred             cccccccCCcccccCC----CccccccccccCCce-EEEEEEEe--CCEEEEEeCceeeEEEeecccCCCeEEEEeCccc
Q 044183          273 VLHSYYPLGSLESIVN----PVQPTLATEDMGAGR-FTLNISRV--NGSVAIDTGLVQASVTQTVFDQNPLAIFGVSKVL  345 (419)
Q Consensus       273 vvp~~~~~~~l~~~~~----~v~~Tla~~~~~~~~-~~l~v~~~--g~~V~v~~g~~~a~V~~~~~~~~ngvIh~ID~VL  345 (419)
                      |++++++.+++....+    .+ +|+.+     +. ..++++.+  ++.+.+++|..+|+|+..++.+.||+||+||+||
T Consensus        81 vv~g~~~~~~l~~~~~~~~~~~-~Tl~g-----~~~l~~~v~~~~~~~~v~v~~g~~~a~v~~~di~~~NGvIhvID~VL  154 (324)
T 1o70_A           81 IIKDRLNVDKIRQKNANLIAQV-PTVNN-----NTFLYFNVRGEGSDTVITVEGGGVNATVIQADVAQTNGYVHIIDHVL  154 (324)
T ss_dssp             EESSCCCHHHHHHHTSSSCCCE-EBSST-----TCEEEEEEESCGGGCEEEEEETTEEEEEEEEEEECSSEEEEEESSCT
T ss_pred             EeCCeecHHHHhhccCCCceEE-EcCCC-----CceEEEEEeecCCceEEEEcCCceeEEEEeccccccCcEEEEEchhh
Confidence            9999999888875432    45 57765     32 55666643  3468888776679999999999999999999999


Q ss_pred             cCCC
Q 044183          346 LPRE  349 (419)
Q Consensus       346 ~P~~  349 (419)
                      .|+.
T Consensus       155 ~pp~  158 (324)
T 1o70_A          155 GVPY  158 (324)
T ss_dssp             TSCC
T ss_pred             hhch
Confidence            9964

>1w7d_A Fasciclin-like protein; cell adhesion; NMR {Rhodobacter sphaeroides} PDB: 1w7e_A

Probab=99.79  E-value=3.7e-20  Score=161.45  Aligned_cols=131  Identities=15%  Similarity=0.208  Sum_probs=99.0

Q ss_pred             CcCHHHHhCcCCChHHHHHHHHccCchhHHHhcCCCCeEEEEeCCcCcCCCCCCccccC----CCHHHHHHHHHhhhhcc
Q 044183           28 ALNITDLLLPYPDLSAFSALISSTSSAVAADLSHRSSITFLAVPNSYLNSPSSLDFTRR----LSPSSLADLLRYHVLLQ  103 (419)
Q Consensus        28 a~nI~~~L~~~~~lS~f~~lL~~~~t~L~~~L~~~~~~TvfAPtN~AF~~l~~~~~~~~----~~~~~L~~lL~yHVl~~  103 (419)
                      ..||.++|+++++||+|.++|++  +|+.+.|++.++||||||+|+||+++... ....    .+++.|+++|+|||+++
T Consensus         2 ~~~i~~~l~~~~~~s~f~~~l~~--agl~~~L~~~~~~TvFAPtn~Af~~l~~~-~~~~l~~~~~~~~l~~lL~yHvv~~   78 (137)
T 1w7d_A            2 TGDIVETATGAGSFTTLLTAAEA--AGLVDTLKGDGPFTVFAPTDAAFAALPEG-TVEDLLKPENKEKLTEILTYHVVPG   78 (137)
T ss_dssp             CSTTGGGGGSCSSSTTTTHHHHH--TTTHHHHTSSSCEEEECCCHHHHTTSTTT-HHHHTTSHHHHHHHHHHHHHHEEES
T ss_pred             CCCHHHHHHhCCCHHHHHHHHHH--cCCHHHHcCCCCEEEEEECHHHHHHcCHh-HHHHHhCcCCHHHHHHHHHhhEeCc
Confidence            46899999999999999999999  99999999999999999999999976321 1111    26789999999999999


Q ss_pred             ccChhcccccCCCCceeeeeecccCCCCCCcceEEEEeCCCCCeEEEeCCCCCCCcceEEEeeeeecccceeEEeecccc
Q 044183          104 YLSWADLRKIPSSGILVTTLFQTTGRASSNFGSVNISRNPATNAIAIHSPAPYSASNATVLTLIKTLPYNITILSINSLL  183 (419)
Q Consensus       104 ~~~~~~L~~l~~~~~l~~Tl~q~tg~~~~~~g~vnit~~~~~g~v~~~s~~~g~~~~a~vv~~v~~~~~Ng~Vh~Id~vL  183 (419)
                      ++..++|..    +..++|+-   |      ..+.|+.. + | +.++.        +.+++.. ....||+||.||+||
T Consensus        79 ~~~~~~l~~----~~~~~tl~---G------~~l~v~~~-~-g-v~vn~--------a~v~~~d-i~~~NGvIHvID~VL  133 (137)
T 1w7d_A           79 EVMSSDLTE----GMTAETVE---G------GALTVTLE-G-G-PKVNG--------VSISQPD-VDASNGVIHVIDGVL  133 (137)
T ss_dssp             CCCTTTSCS----SEEEECTT---S------CEEEEECT-T-S-CEETT--------EECSBCC-CBCSSSEEEBCSSCC
T ss_pred             EEcHHHhcC----CCeeeccC---C------ceEEEEec-C-C-EEEeC--------cEEEECC-eecCCeEEEEECeee
Confidence            998888753    22344431   2      24677664 3 6 77642        3344321 135799999999999


Q ss_pred             ccc
Q 044183          184 VPY  186 (419)
Q Consensus       184 ~P~  186 (419)
                      +|+
T Consensus       134 ~P~  136 (137)
T 1w7d_A          134 MPG  136 (137)
T ss_dssp             SSC
T ss_pred             CCC
Confidence            996

>2vxp_A Transforming growth factor-beta-induced protein IG-H3; RGD-containing collagen-associated protein, FAS1, BIGH3, vision, amyloid, RGD-CAP, secreted; 2.5A {Homo sapiens} PDB: 1x3b_A

Probab=99.75  E-value=1.3e-18  Score=150.73  Aligned_cols=129  Identities=19%  Similarity=0.214  Sum_probs=94.9

Q ss_pred             cCHHHHhCcCCChHHHHHHHHccCchhHHHhcCCCCeEEEEeCCcCcCCCCCCc--cccCCCHHHHHHHHHhhhhccccC
Q 044183           29 LNITDLLLPYPDLSAFSALISSTSSAVAADLSHRSSITFLAVPNSYLNSPSSLD--FTRRLSPSSLADLLRYHVLLQYLS  106 (419)
Q Consensus        29 ~nI~~~L~~~~~lS~f~~lL~~~~t~L~~~L~~~~~~TvfAPtN~AF~~l~~~~--~~~~~~~~~L~~lL~yHVl~~~~~  106 (419)
                      .||.++|+++++||+|.+++++  +|+.+.|++.++||||||+|+||+++....  ... .+++.|+++|+|||+++.+.
T Consensus         2 ~ti~~~l~~~~~fs~~~~~l~~--agl~~~L~~~~~~TvFAPtn~Af~~l~~~~~~~l~-~~~~~l~~iL~yHvv~~~~~   78 (132)
T 2vxp_A            2 GTVMDVLKGDNRFSMLVAAIQS--AGLTETLNREGVYTVFAPTNEAFRALPPRERSRLL-GDAKELANILKYHIGDEILV   78 (132)
T ss_dssp             CCHHHHHTTSTTCHHHHHHHHH--HTCHHHHHSSCCEEEEEECHHHHHHSCHHHHHHHH-TCHHHHHHHHHHSBBSSCCC
T ss_pred             ccHHHHHHcCCCHHHHHHHHHH--cCcHHHHcCCCCEEEEeECHHHHHhhCHHHHHHHh-cCHHHHHHHHHhcCcCceee
Confidence            5899999999999999999999  999999999999999999999999653111  111 37889999999999999887


Q ss_pred             hhcccccCCCCceeeeeecccCCCCCCcceEEEEeCCCCCeEEEeCCCCCCCcceEEEeeeeecccceeEEeeccccc
Q 044183          107 WADLRKIPSSGILVTTLFQTTGRASSNFGSVNISRNPATNAIAIHSPAPYSASNATVLTLIKTLPYNITILSINSLLV  184 (419)
Q Consensus       107 ~~~L~~l~~~~~l~~Tl~q~tg~~~~~~g~vnit~~~~~g~v~~~s~~~g~~~~a~vv~~v~~~~~Ng~Vh~Id~vL~  184 (419)
                      ..++..    ...++|+.   |      ..+.++.. + +.+.++.        +.+++... ...||+||.||+||+
T Consensus        79 ~~~l~~----~~~~~tl~---G------~~l~v~~~-~-~~v~vn~--------a~v~~~di-~a~NGvIHvID~VLl  132 (132)
T 2vxp_A           79 SGGIGA----LVRLKSLQ---G------DKLEVSLK-N-NVVSVNK--------EPVAEPDI-MATNGVVHVITNVLQ  132 (132)
T ss_dssp             STTCSS----CEEEEBTT---S------SEEEEEEE-T-TEEEESS--------CBEEEEEE-EETTEEEEEESSCC-
T ss_pred             hhhccC----CceEecCC---C------CEEEEEEe-C-CEEEEec--------cEEEEcce-ecCCEEEEEECcEeC
Confidence            776632    23344431   2      24667664 3 6677742        23443211 257999999999984

>1nyo_A Immunogenic protein MPT70; seven-stranded beta-barrel, fasciclin domain, structural genomics, PSI, protein structure initiative; NMR {Mycobacterium tuberculosis} SCOP: b.118.1.1

Probab=99.74  E-value=9.7e-19  Score=157.04  Aligned_cols=129  Identities=23%  Similarity=0.262  Sum_probs=97.7

Q ss_pred             CcCHHHHhCcCCChHHHHHHHH-----ccCchhHHHhcCCCCeEEEEeCCcCcCCCCCCc--cccCCCHHHHHHHHHhhh
Q 044183           28 ALNITDLLLPYPDLSAFSALIS-----STSSAVAADLSHRSSITFLAVPNSYLNSPSSLD--FTRRLSPSSLADLLRYHV  100 (419)
Q Consensus        28 a~nI~~~L~~~~~lS~f~~lL~-----~~~t~L~~~L~~~~~~TvfAPtN~AF~~l~~~~--~~~~~~~~~L~~lL~yHV  100 (419)
                      ..+|.++|+++++||+|.++|.     +  ++|.+.|++.+ ||||||+|+||+++....  .+. .+++.|+++|+|||
T Consensus        27 ~~~i~~~l~~~~~~s~f~~~l~~~~~~~--agl~~~L~~~g-~TvFAPtn~AF~~l~~~~~~~L~-~~~~~L~~iL~yHv  102 (163)
T 1nyo_A           27 QDPVAVAASNNPELTTLTAALSGQLNPQ--VNLVDTLNSGQ-YTVFAPTNAAFSKLPASTIDELK-TNSSLLTSILTYHV  102 (163)
T ss_dssp             HSCHHHHHTTSTTTHHHHHHHHSSSCTT--CCCHHHHTSSS-EEECCBCHHHHHHSCHHHHHHHT-TCSSHHHHHHHHTE
T ss_pred             CcCHHHHHHhCCCHHHHHHHHHhccccc--cCHHHHhCCCC-cEEEEECHHHHHhccHHHHHHHh-cCHHHHHHHHHhce
Confidence            4799999999999999999999     8  99999999999 999999999999652100  111 25678999999999


Q ss_pred             hccccChhcccccCCCCceeeeeecccCCCCCCcceEEEEeCCCCCeEEEeCCCCCCCcceEEEeeeeecccceeEEeec
Q 044183          101 LLQYLSWADLRKIPSSGILVTTLFQTTGRASSNFGSVNISRNPATNAIAIHSPAPYSASNATVLTLIKTLPYNITILSIN  180 (419)
Q Consensus       101 l~~~~~~~~L~~l~~~~~l~~Tl~q~tg~~~~~~g~vnit~~~~~g~v~~~s~~~g~~~~a~vv~~v~~~~~Ng~Vh~Id  180 (419)
                      +++++..++|.    +  .++|+   .|      ..++|+...  +.+.++.        +.|++... ...||+||.||
T Consensus       103 v~g~~~~~~l~----g--~~~Tl---~G------~~l~v~~~~--~~v~vn~--------a~V~~~di-~a~NGvIHvID  156 (163)
T 1nyo_A          103 VAGQTSPANVV----G--TRQTL---QG------ASVTVTGQG--NSLKVGN--------ADVVCGGV-STANATVYMID  156 (163)
T ss_dssp             EESCCCTTTSC----E--EEECT---TS------SEEEEEECS--SCEEETT--------EECSSBCC-CCSSEEEBCBS
T ss_pred             ECCEEcHHHhC----C--ccccC---CC------CEEEEEEEC--CEEEEec--------cEEEECce-EcCCEEEEEEC
Confidence            99999988874    1  24443   12      247777653  5677742        34443211 35799999999


Q ss_pred             cccccc
Q 044183          181 SLLVPY  186 (419)
Q Consensus       181 ~vL~P~  186 (419)
                      +||+|+
T Consensus       157 ~VL~P~  162 (163)
T 1nyo_A          157 SVLMPP  162 (163)
T ss_dssp             SCCCCC
T ss_pred             cEeCCC
Confidence            999996

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	419
d1o70a1	140	b.118.1.1 (A:328-467) Fasciclin I {Fruit fly (Dros	2e-11
d1o70a2	157	b.118.1.1 (A:468-624) Fasciclin I {Fruit fly (Dros	8e-08
d1nyoa_	163	b.118.1.1 (A:) Immunogenic protein MPT70 {Mycobact	0.003

>d1o70a1 b.118.1.1 (A:328-467) Fasciclin I {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 140

class: All beta proteins
fold: FAS1 domain
superfamily: FAS1 domain
family: FAS1 domain
domain: Fasciclin I
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

 Score = 59.4 bits (143), Expect = 2e-11
 Identities = 19/138 (13%), Positives = 46/138 (33%), Gaps = 4/138 (2%)

Query: 211 HNFNVAASMLAASGVVEEFEADEGGAGITLFVPTDLAFADLPNNVKLQSLPADKKAVVLK 270
                   ++  +G     +       +T+  P++ A+     N  L+    +K   +L 
Sbjct: 4   GALRKFYEVIMDNGG-AVLDDINSLTEVTILAPSNEAWNSSNINNVLR--DRNKMRQILN 60

Query: 271 FHVLHSYYPLGSLESIVNPVQPTLATEDMGAG-RFTLNISRVNGSVAIDTGLVQASVTQT 329
            H++     +  +      +   + T +      F +     +  + ++ G V A+V Q 
Sbjct: 61  MHIIKDRLNVDKIRQKNANLIAQVPTVNNNTFLYFNVRGEGSDTVITVEGGGVNATVIQA 120

Query: 330 VFDQNPLAIFGVSKVLLP 347
              Q    +  +  VL  
Sbjct: 121 DVAQTNGYVHIIDHVLGV 138

>d1o70a2 b.118.1.1 (A:468-624) Fasciclin I {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 157

class: All beta proteins
fold: FAS1 domain
superfamily: FAS1 domain
family: FAS1 domain
domain: Fasciclin I
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

 Score = 49.1 bits (116), Expect = 8e-08
 Identities = 16/142 (11%), Positives = 37/142 (26%), Gaps = 8/142 (5%)

Query: 212 NFNVAASMLAASGVVEEFEADEGGAGITLFVPTDLAFADLPNNVKLQSL------PADKK 265
             +    M   S   ++   +      T FVP D  +     +             +   
Sbjct: 12  MMSDTYKMGKFSHFNDQL--NNTQRRFTYFVPRDKGWQKTELDYPSAHKKLFMADFSYHS 69

Query: 266 AVVLKFHVLHSYYPLGSLESIVNPVQPTLATEDMGAGRFTLNISRVNGSVAIDTGLVQAS 325
             +L+ H+  S       + +    +             ++ +    G   I     + +
Sbjct: 70  KSILERHLAISDKEYTMKDLVKFSQESGSVILPTFRDSLSIRVEEEAGRYVIIWNYKKIN 129

Query: 326 VTQTVFDQNPLAIFGVSKVLLP 347
           V +   +     I  +   LL 
Sbjct: 130 VYRPDVECTNGIIHVIDYPLLE 151

>d1nyoa_ b.118.1.1 (A:) Immunogenic protein MPT70 {Mycobacterium tuberculosis [TaxId: 1773]} Length = 163

class: All beta proteins
fold: FAS1 domain
superfamily: FAS1 domain
family: FAS1 domain
domain: Immunogenic protein MPT70
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 36.3 bits (83), Expect = 0.003
 Identities = 21/134 (15%), Positives = 47/134 (35%), Gaps = 20/134 (14%)

Query: 215 VAASMLAASGVVEEFEADEGGAGITLFVPTDLAFADLPNNVKLQSL-PADKKAVVLKFHV 273
           ++  +     +V+   + +     T+F PT+ AF+ LP +   +    +     +L +HV
Sbjct: 47  LSGQLNPQVNLVDTLNSGQ----YTVFAPTNAAFSKLPASTIDELKTNSSLLTSILTYHV 102

Query: 274 LHSYYPLGSLESIVNPVQPTLATEDMGAGRFTLNISRVNGSVAIDTGLVQASVTQTVFDQ 333
           +       ++      +Q    T         +  + V          V   V+      
Sbjct: 103 VAGQTSPANVVGTRQTLQGASVTVTGQGNSLKVGNADV----------VCGGVSTA---- 148

Query: 334 NPLAIFGVSKVLLP 347
           N   ++ +  VL+P
Sbjct: 149 NAT-VYMIDSVLMP 161

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	419
d1nyoa_	163	Immunogenic protein MPT70 {Mycobacterium tuberculo	99.88
d1o70a2	157	Fasciclin I {Fruit fly (Drosophila melanogaster) [	99.85
d1o70a1	140	Fasciclin I {Fruit fly (Drosophila melanogaster) [	99.84
d1nyoa_	163	Immunogenic protein MPT70 {Mycobacterium tuberculo	99.72
d1o70a1	140	Fasciclin I {Fruit fly (Drosophila melanogaster) [	99.63
d1o70a2	157	Fasciclin I {Fruit fly (Drosophila melanogaster) [	99.62

>d1nyoa_ b.118.1.1 (A:) Immunogenic protein MPT70 {Mycobacterium tuberculosis [TaxId: 1773]}

class: All beta proteins
fold: FAS1 domain
superfamily: FAS1 domain
family: FAS1 domain
domain: Immunogenic protein MPT70
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.88  E-value=5.1e-24  Score=189.22  Aligned_cols=129  Identities=18%  Similarity=0.318  Sum_probs=107.0

Q ss_pred             hhHHHHHhcCCChHHHHHHHHh-----cCchhhhhcCCCCCceEEEeeCcHHHhcCCCCccCCCC--CHHHHHHHhhhcc
Q 044183          201 LNITKALIDGHNFNVAASMLAA-----SGVVEEFEADEGGAGITLFVPTDLAFADLPNNVKLQSL--PADKKAVVLKFHV  273 (419)
Q Consensus       201 ~nlt~~L~~~~~fstf~~lL~~-----t~l~~~l~~~~~~~~~TVFAPTD~AF~~L~~~~~l~~l--~~~~l~~lL~yHv  273 (419)
                      .++.+.+..+++|++|..+|++     +||.++|++ +   +||||||||+||++++.+ .++.+  +++.|+++|+|||
T Consensus        28 ~~v~~~a~~~p~lstl~~Al~a~~~~~a~L~~~L~~-g---pfTvFAPtn~AF~~l~~~-~~~~l~~~~~~L~~iL~yHV  102 (163)
T d1nyoa_          28 DPVAVAASNNPELTTLTAALSGQLNPQVNLVDTLNS-G---QYTVFAPTNAAFSKLPAS-TIDELKTNSSLLTSILTYHV  102 (163)
T ss_dssp             SCHHHHHTTSTTTHHHHHHHHSSSCTTCCCHHHHTS-S---SEEECCBCHHHHHHSCHH-HHHHHTTCSSHHHHHHHHTE
T ss_pred             chHHHHHhcCCchHHHHHHHhhccccccchhHhhcC-C---CeEEEEECcHHHHhcCHH-HHHhhhhhHHHHHHhhhhhh
Confidence            3577888889999999999984     799999974 3   899999999999999865 34332  4578999999999


Q ss_pred             ccccccCCcccccCCCccccccccccCCceEEEEEEEeCCEEEEEeCceeeEEEeecccCCCeEEEEeCccccCCC
Q 044183          274 LHSYYPLGSLESIVNPVQPTLATEDMGAGRFTLNISRVNGSVAIDTGLVQASVTQTVFDQNPLAIFGVSKVLLPRE  349 (419)
Q Consensus       274 vp~~~~~~~l~~~~~~v~~Tla~~~~~~~~~~l~v~~~g~~V~v~~g~~~a~V~~~~~~~~ngvIh~ID~VL~P~~  349 (419)
                      +++.+..+++..   .+ +|+.|     +  .+.|+.+++.+.|    ++++|+..|+.+.||+||+||+||+||.
T Consensus       103 v~g~~~~~~l~~---~~-~Tl~G-----~--~l~v~~~~~~i~v----~~a~Vv~~di~a~NGvIHvID~VLlPPa  163 (163)
T d1nyoa_         103 VAGQTSPANVVG---TR-QTLQG-----A--SVTVTGQGNSLKV----GNADVVCGGVSTANATVYMIDSVLMPPA  163 (163)
T ss_dssp             EESCCCTTTSCE---EE-ECTTS-----S--EEEEEECSSCEEE----TTEECSSBCCCCSSEEEBCBSSCCCCCC
T ss_pred             hhhhhhhhhhhh---hh-hhccC-----c--ceeEEecCCEEEE----eceEEEECCeecCCcEEEEECccccCCC
Confidence            999999888753   34 47765     3  5677778888887    4589999999999999999999999984

>d1o70a2 b.118.1.1 (A:468-624) Fasciclin I {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: All beta proteins
fold: FAS1 domain
superfamily: FAS1 domain
family: FAS1 domain
domain: Fasciclin I
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=99.85  E-value=4.4e-22  Score=174.78  Aligned_cols=142  Identities=13%  Similarity=0.059  Sum_probs=106.7

Q ss_pred             hHHHHHhcCCChHHHHHHHHhcCchhhhhcCCCCCceEEEeeCcHHHhcCCCC------ccCCCCCHHHHHHHhhhcccc
Q 044183          202 NITKALIDGHNFNVAASMLAASGVVEEFEADEGGAGITLFVPTDLAFADLPNN------VKLQSLPADKKAVVLKFHVLH  275 (419)
Q Consensus       202 nlt~~L~~~~~fstf~~lL~~t~l~~~l~~~~~~~~~TVFAPTD~AF~~L~~~------~~l~~l~~~~l~~lL~yHvvp  275 (419)
                      +|.+.|+.+++|+.|.++++.+|+.++|+...  ..||||||+|+||+++...      ..+....++.++++|+|||++
T Consensus         2 Ti~~~l~~~p~ls~~~~~~~~s~l~~~L~~~~--~~~TvFaPtn~Af~~l~~~~~~~~~~~~~~~~~~~l~~il~~Hiv~   79 (157)
T d1o70a2           2 TVLGKLESDPMMSDTYKMGKFSHFNDQLNNTQ--RRFTYFVPRDKGWQKTELDYPSAHKKLFMADFSYHSKSILERHLAI   79 (157)
T ss_dssp             CHHHHHHHCGGGHHHHHHTTTTTTTGGGGCSS--SEEEEEEECHHHHHHHHHHCHHHHHHHTSGGGHHHHHHHHHTTEEE
T ss_pred             cHHHHHHhCccHHHHHHHHHhCCHHHHHhCCC--CceEEEecCHHHHHHhhhhccchhhhhcCcccHHHHHHHheeEEec
Confidence            57889999999999999999999999998764  2899999999999996422      012223467899999999999


Q ss_pred             ccccCCcccc--c--CCCccccccccccCCceEEEEEEEeCCEEEEEeCceeeEEEeecccCCCeEEEEeCccccCCC
Q 044183          276 SYYPLGSLES--I--VNPVQPTLATEDMGAGRFTLNISRVNGSVAIDTGLVQASVTQTVFDQNPLAIFGVSKVLLPRE  349 (419)
Q Consensus       276 ~~~~~~~l~~--~--~~~v~~Tla~~~~~~~~~~l~v~~~g~~V~v~~g~~~a~V~~~~~~~~ngvIh~ID~VL~P~~  349 (419)
                      +.....+...  .  ..+- ....   ..++.+.+++...++.+.+....+.|+|+..|+.+.||+||+||+||+|+.
T Consensus        80 g~~~~~~~~~~~~~~~~~~-~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~a~V~~~Di~a~NGviHvID~VLlp~~  153 (157)
T d1o70a2          80 SDKEYTMKDLVKFSQESGS-VILP---TFRDSLSIRVEEEAGRYVIIWNYKKINVYRPDVECTNGIIHVIDYPLLEEK  153 (157)
T ss_dssp             ESSCCCHHHHHHHHHHSSS-EEEE---CSSSEEEEEEEEETTEEEEEETTEEEEEEEEEEEETTEEEEEESSCSCCTT
T ss_pred             ccccchhhhhhhhhccCCc-eeEE---ecCCcEEEEEEcCCcEEEEecCCccceEEECCEecCCeEEEEECceecCCC
Confidence            7654443221  0  0110 0111   122557788888888877776678899999999999999999999999953

>d1o70a1 b.118.1.1 (A:328-467) Fasciclin I {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: All beta proteins
fold: FAS1 domain
superfamily: FAS1 domain
family: FAS1 domain
domain: Fasciclin I
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=99.84  E-value=8e-22  Score=169.60  Aligned_cols=130  Identities=16%  Similarity=0.245  Sum_probs=99.2

Q ss_pred             cCCChHHHHHHHHhcC--chhhhhcCCCCCceEEEeeCcHHHhcCCCCccCCCCCHHHHHHHhhhccccccccCCccccc
Q 044183          209 DGHNFNVAASMLAASG--VVEEFEADEGGAGITLFVPTDLAFADLPNNVKLQSLPADKKAVVLKFHVLHSYYPLGSLESI  286 (419)
Q Consensus       209 ~~~~fstf~~lL~~t~--l~~~l~~~~~~~~~TVFAPTD~AF~~L~~~~~l~~l~~~~l~~lL~yHvvp~~~~~~~l~~~  286 (419)
                      ++++|++|.++|+++|  +.++|++..   ++|||||||+||+++... .+. .+.++++++|+|||+++.++..++...
T Consensus         2 ~~~~~~~f~~~i~~~g~~~~~~l~~~~---~~TvFAPtn~Af~~~~~~-~~~-~~~~~l~~~l~yHiv~~~~~~~~l~~~   76 (140)
T d1o70a1           2 ENGALRKFYEVIMDNGGAVLDDINSLT---EVTILAPSNEAWNSSNIN-NVL-RDRNKMRQILNMHIIKDRLNVDKIRQK   76 (140)
T ss_dssp             CHHHHHHHHHHHHHTCSHHHHHHHTCS---SEEEEEECHHHHHHTCTH-HHH-TCHHHHHHHHHHTEESSCCCHHHHHHH
T ss_pred             CCccHHHHHHHHHHHHHHHHHHhcCCC---CEEEEEECHHHHhcCChh-hhc-CCHHHHHHHHHhhccCCeEEHHHHhcC
Confidence            4577999999999997  678888765   899999999999997654 222 367889999999999999988888643


Q ss_pred             CCC----ccccccccccCCceEEEEEEEeC--CEEEEEeCceeeEEEeecccCCCeEEEEeCccccCC
Q 044183          287 VNP----VQPTLATEDMGAGRFTLNISRVN--GSVAIDTGLVQASVTQTVFDQNPLAIFGVSKVLLPR  348 (419)
Q Consensus       287 ~~~----v~~Tla~~~~~~~~~~l~v~~~g--~~V~v~~g~~~a~V~~~~~~~~ngvIh~ID~VL~P~  348 (419)
                      ...    + +|+.+    ...+.+++..++  ..+.+.++.+.|+|+..|+.+.||+||+||+||.||
T Consensus        77 ~~~~~~~~-~t~~g----~~~~~~~~~~~~~~~~~~~~~~~~~a~V~~~Di~~~NGvIH~ID~VL~~P  139 (140)
T d1o70a1          77 NANLIAQV-PTVNN----NTFLYFNVRGEGSDTVITVEGGGVNATVIQADVAQTNGYVHIIDHVLGVP  139 (140)
T ss_dssp             TSSSCCCE-EBSST----TCEEEEEEESCGGGCEEEEEETTEEEEEEEEEEECSSEEEEEESSCTTSC
T ss_pred             cccCceEe-eecCC----CceEEEEEeccceeEEEEecCCcceEEEEeCCEecCCeEEEEECCccCCc
Confidence            221    2 24433    122334444332  346666677889999999999999999999999997

>d1nyoa_ b.118.1.1 (A:) Immunogenic protein MPT70 {Mycobacterium tuberculosis [TaxId: 1773]}

class: All beta proteins
fold: FAS1 domain
superfamily: FAS1 domain
family: FAS1 domain
domain: Immunogenic protein MPT70
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.72  E-value=9.4e-19  Score=154.92  Aligned_cols=131  Identities=23%  Similarity=0.253  Sum_probs=94.6

Q ss_pred             cCHHHHhCcCCChHHHHHHHHc---cCchhHHHhcCCCCeEEEEeCCcCcCCCCCCc-cccCCCHHHHHHHHHhhhhccc
Q 044183           29 LNITDLLLPYPDLSAFSALISS---TSSAVAADLSHRSSITFLAVPNSYLNSPSSLD-FTRRLSPSSLADLLRYHVLLQY  104 (419)
Q Consensus        29 ~nI~~~L~~~~~lS~f~~lL~~---~~t~L~~~L~~~~~~TvfAPtN~AF~~l~~~~-~~~~~~~~~L~~lL~yHVl~~~  104 (419)
                      .+|.+.++++|+||+|.++|..   ..++|.+.|++ |+||||||+|+||.++.... .....+++.|+++|+|||++++
T Consensus        28 ~~v~~~a~~~p~lstl~~Al~a~~~~~a~L~~~L~~-gpfTvFAPtn~AF~~l~~~~~~~l~~~~~~L~~iL~yHVv~g~  106 (163)
T d1nyoa_          28 DPVAVAASNNPELTTLTAALSGQLNPQVNLVDTLNS-GQYTVFAPTNAAFSKLPASTIDELKTNSSLLTSILTYHVVAGQ  106 (163)
T ss_dssp             SCHHHHHTTSTTTHHHHHHHHSSSCTTCCCHHHHTS-SSEEECCBCHHHHHHSCHHHHHHHTTCSSHHHHHHHHTEEESC
T ss_pred             chHHHHHhcCCchHHHHHHHhhccccccchhHhhcC-CCeEEEEECcHHHHhcCHHHHHhhhhhHHHHHHhhhhhhhhhh
Confidence            5799999999999999999982   01799999986 99999999999999663111 1112356789999999999999


Q ss_pred             cChhcccccCCCCceeeeeecccCCCCCCcceEEEEeCCCCCeEEEeCCCCCCCcceEEEeeeeecccceeEEeeccccc
Q 044183          105 LSWADLRKIPSSGILVTTLFQTTGRASSNFGSVNISRNPATNAIAIHSPAPYSASNATVLTLIKTLPYNITILSINSLLV  184 (419)
Q Consensus       105 ~~~~~L~~l~~~~~l~~Tl~q~tg~~~~~~g~vnit~~~~~g~v~~~s~~~g~~~~a~vv~~v~~~~~Ng~Vh~Id~vL~  184 (419)
                      +..+++..      ..+|+-   |      ..+.++..+  +.+.++.        ++|+... ....||+||.||+||+
T Consensus       107 ~~~~~l~~------~~~Tl~---G------~~l~v~~~~--~~i~v~~--------a~Vv~~d-i~a~NGvIHvID~VLl  160 (163)
T d1nyoa_         107 TSPANVVG------TRQTLQ---G------ASVTVTGQG--NSLKVGN--------ADVVCGG-VSTANATVYMIDSVLM  160 (163)
T ss_dssp             CCTTTSCE------EEECTT---S------SEEEEEECS--SCEEETT--------EECSSBC-CCCSSEEEBCBSSCCC
T ss_pred             hhhhhhhh------hhhhcc---C------cceeEEecC--CEEEEec--------eEEEECC-eecCCcEEEEECcccc
Confidence            98877631      133321   1      346676653  5677742        3344321 1357999999999999


Q ss_pred             cc
Q 044183          185 PY  186 (419)
Q Consensus       185 P~  186 (419)
                      ||
T Consensus       161 PP  162 (163)
T d1nyoa_         161 PP  162 (163)
T ss_dssp             CC
T ss_pred             CC
Confidence            97

>d1o70a1 b.118.1.1 (A:328-467) Fasciclin I {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: All beta proteins
fold: FAS1 domain
superfamily: FAS1 domain
family: FAS1 domain
domain: Fasciclin I
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=99.63  E-value=7.2e-17  Score=138.12  Aligned_cols=136  Identities=20%  Similarity=0.181  Sum_probs=89.4

Q ss_pred             CcCCChHHHHHHHHccCch--hHHHhcCCCCeEEEEeCCcCcCCCCCCccccCCCHHHHHHHHHhhhhccccChhccccc
Q 044183           36 LPYPDLSAFSALISSTSSA--VAADLSHRSSITFLAVPNSYLNSPSSLDFTRRLSPSSLADLLRYHVLLQYLSWADLRKI  113 (419)
Q Consensus        36 ~~~~~lS~f~~lL~~~~t~--L~~~L~~~~~~TvfAPtN~AF~~l~~~~~~~~~~~~~L~~lL~yHVl~~~~~~~~L~~l  113 (419)
                      ++++.|++|.++|.+  ++  +.++|++.+++|||||+|+||+++.  ......+.+.|+++|+|||+++.+...+|...
T Consensus         1 a~~~~~~~f~~~i~~--~g~~~~~~l~~~~~~TvFAPtn~Af~~~~--~~~~~~~~~~l~~~l~yHiv~~~~~~~~l~~~   76 (140)
T d1o70a1           1 AENGALRKFYEVIMD--NGGAVLDDINSLTEVTILAPSNEAWNSSN--INNVLRDRNKMRQILNMHIIKDRLNVDKIRQK   76 (140)
T ss_dssp             CCHHHHHHHHHHHHH--TCSHHHHHHHTCSSEEEEEECHHHHHHTC--THHHHTCHHHHHHHHHHTEESSCCCHHHHHHH
T ss_pred             CCCccHHHHHHHHHH--HHHHHHHHhcCCCCEEEEEECHHHHhcCC--hhhhcCCHHHHHHHHHhhccCCeEEHHHHhcC
Confidence            356789999999998  64  8899999999999999999999542  11122478899999999999999999888643


Q ss_pred             CCC-CceeeeeecccCCCCCCcceEEEEeCCCCCeEEEeCCCCCCCcceEEEeeeeecccceeEEeeccccccc
Q 044183          114 PSS-GILVTTLFQTTGRASSNFGSVNISRNPATNAIAIHSPAPYSASNATVLTLIKTLPYNITILSINSLLVPY  186 (419)
Q Consensus       114 ~~~-~~l~~Tl~q~tg~~~~~~g~vnit~~~~~g~v~~~s~~~g~~~~a~vv~~v~~~~~Ng~Vh~Id~vL~P~  186 (419)
                      ... ...+.|+.   |   +.....++.....+..+...    +....+.|++... ...||+||+||+||.||
T Consensus        77 ~~~~~~~~~t~~---g---~~~~~~~~~~~~~~~~~~~~----~~~~~a~V~~~Di-~~~NGvIH~ID~VL~~P  139 (140)
T d1o70a1          77 NANLIAQVPTVN---N---NTFLYFNVRGEGSDTVITVE----GGGVNATVIQADV-AQTNGYVHIIDHVLGVP  139 (140)
T ss_dssp             TSSSCCCEEBSS---T---TCEEEEEEESCGGGCEEEEE----ETTEEEEEEEEEE-ECSSEEEEEESSCTTSC
T ss_pred             cccCceEeeecC---C---CceEEEEEeccceeEEEEec----CCcceEEEEeCCE-ecCCeEEEEECCccCCc
Confidence            221 11223321   1   11222333332211223332    1223466665432 35799999999999886

>d1o70a2 b.118.1.1 (A:468-624) Fasciclin I {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: All beta proteins
fold: FAS1 domain
superfamily: FAS1 domain
family: FAS1 domain
domain: Fasciclin I
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=99.62  E-value=2.1e-17  Score=144.54  Aligned_cols=141  Identities=13%  Similarity=0.044  Sum_probs=89.1

Q ss_pred             CHHHHhCcCCChHHHHHHHHccCchhHHHhcCC-CCeEEEEeCCcCcCCCCC--Cc----cccCCCHHHHHHHHHhhhhc
Q 044183           30 NITDLLLPYPDLSAFSALISSTSSAVAADLSHR-SSITFLAVPNSYLNSPSS--LD----FTRRLSPSSLADLLRYHVLL  102 (419)
Q Consensus        30 nI~~~L~~~~~lS~f~~lL~~~~t~L~~~L~~~-~~~TvfAPtN~AF~~l~~--~~----~~~~~~~~~L~~lL~yHVl~  102 (419)
                      +|.+.|+++|+||.|.++++.  +++.+.|++. ++||||||+|+||+++..  ..    ......++.|+++|+|||++
T Consensus         2 Ti~~~l~~~p~ls~~~~~~~~--s~l~~~L~~~~~~~TvFaPtn~Af~~l~~~~~~~~~~~~~~~~~~~l~~il~~Hiv~   79 (157)
T d1o70a2           2 TVLGKLESDPMMSDTYKMGKF--SHFNDQLNNTQRRFTYFVPRDKGWQKTELDYPSAHKKLFMADFSYHSKSILERHLAI   79 (157)
T ss_dssp             CHHHHHHHCGGGHHHHHHTTT--TTTTGGGGCSSSEEEEEEECHHHHHHHHHHCHHHHHHHTSGGGHHHHHHHHHTTEEE
T ss_pred             cHHHHHHhCccHHHHHHHHHh--CCHHHHHhCCCCceEEEecCHHHHHHhhhhccchhhhhcCcccHHHHHHHheeEEec
Confidence            689999999999999999999  9999999876 689999999999995410  00    11223478899999999998


Q ss_pred             cccChhc--cccc--CCCCceeeeeecccCCCCCCcceEEEEeCCCCCeEEEeCCCCCCCcceEEEeeeeecccceeEEe
Q 044183          103 QYLSWAD--LRKI--PSSGILVTTLFQTTGRASSNFGSVNISRNPATNAIAIHSPAPYSASNATVLTLIKTLPYNITILS  178 (419)
Q Consensus       103 ~~~~~~~--L~~l--~~~~~l~~Tl~q~tg~~~~~~g~vnit~~~~~g~v~~~s~~~g~~~~a~vv~~v~~~~~Ng~Vh~  178 (419)
                      +......  +...  ..+.....+    .+    ..-.+++...+  +.+.+..    ....+.+++... ...||+||+
T Consensus        80 g~~~~~~~~~~~~~~~~~~~~~~~----~~----~~~~~~~~~~~--~~~~~~~----~~~~a~V~~~Di-~a~NGviHv  144 (157)
T d1o70a2          80 SDKEYTMKDLVKFSQESGSVILPT----FR----DSLSIRVEEEA--GRYVIIW----NYKKINVYRPDV-ECTNGIIHV  144 (157)
T ss_dssp             ESSCCCHHHHHHHHHHSSSEEEEC----SS----SEEEEEEEEET--TEEEEEE----TTEEEEEEEEEE-EETTEEEEE
T ss_pred             ccccchhhhhhhhhccCCceeEEe----cC----CcEEEEEEcCC--cEEEEec----CCccceEEECCE-ecCCeEEEE
Confidence            7543222  1110  011111111    11    11123333332  4444321    112355655321 347999999


Q ss_pred             ecccccccc
Q 044183          179 INSLLVPYG  187 (419)
Q Consensus       179 Id~vL~P~~  187 (419)
                      ||+||+|+.
T Consensus       145 ID~VLlp~~  153 (157)
T d1o70a2         145 IDYPLLEEK  153 (157)
T ss_dssp             ESSCSCCTT
T ss_pred             ECceecCCC
Confidence            999999964