Citrus Sinensis ID: 044240

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-------800-------810-------820-------830-------840-------850-------86
MKGFELLNLFIVLLSCISASARECSNKLPESHQLRYHLLTSKNETWKQEVLNHYHLTPSDDSAWSSLLPRKILREEEDDEFSWAMMYRKMKNPGEFKIPEDKFLEDVSLHDVRLGKDSMHWRAQQTNLEYLLMLDVDRLVWSFRKTAGLRTKGNAYGGWEDPTSQLRGHFVGHYLSASALMWASTHNDTLKEKMSAVVSALSHCQKKIGSGYLSAFPSRYFDHLEALKPVWAPYYTIHKILAGLLDQYKYADNAHALKMATRMVEYFYNRVQKVIRKYSVARHWQYLNEEPGGMNDVLYRLFSITKDPRHLFLAHLFAKPCFLGLLAVQSNDISDFHVNTHIPLVIGTQRRYELTGELLHKEMGTFFMDLVNSSHTYATGGTSVGEFWRDPKRLATTLGTNNEESCTTYNMLKVSRNLFRWTKESAYADFYERALINGVLSIQRGTSPGVMIYMLPLGPGSSKQTDNGWGTPFDSFWCCYGTGIESFSKLGDSIYFEEKGKIPGLYIIQYISSSFDWKSGQIVLNQKVDPVVSSDPYLRITLTFSPKGAGKASTLNLRIPSWSNSNGAKAMLNGQSLALPSPGNSLSVTKTWSSDDKLTIHLPLSLWTEAIKDDRPKYASLQAILYGPYLLAGHSEGDWNITKTAKSLSDWITPIPVSYNSHLVTFSKESRKSKFVLTSSNPSIITMEKFHKFGTDTAVRATFRLIILEDSSSFKYSSYRDFIGKSVMLEPFSHPGMLVAPKGKHHELVVTNSSRAEGSSVFRLVSGLDGKDNTVSLESKSHKGCYVYSLKSGKSMTLRCHKKSKKPKFNHAVSFVMEKGKSKYHPISFVAKGTNRNYLLEPLLSFRDESYTVYFNIQA
ccccHHHHHHHHHHHHHcccccccccccccHHHHHHHHHcccccccHHHHHccccccccccccccccccHHHHccccccHHHHHHHHHHccccccccccccccccccccccEEEcccccHHHHHHHHHHHHHHcccccHHHHHHHHHcccccccccccccccccccccccHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHccccccccccccHHcccccccccccHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccHHHHHHHHHHHcccHHHHHHHHHHccccccccccccccccccccccccccEEcHHHHHHHHHccHHHHHHHHHHHHHHHcccEEEcccccccccccccccccccccccccccHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHccccccccccEEEEEcccccccccccccccccccccccccccccccHHHHccccEEEEEcccccEEEEEEccccEEEEEcccEEEEEEEccccccccEEEEEEEEcccccccEEEEEEEcccccccccEEEEEccEEEccccccccEEEEcccccccEEEEEEccEEEEEEccccccccccEEEEEEccEEEEccccccccccccccccccccccccccccccccEEccccccccEEEEccccccEEEEEcccccccccEEEEEEEEcccccccccccccccccccEEEcccccccccEEccccccccEEEEcccccccccEEEEEEccccccccEEEEccccccEEEEEcccccEEEEEEEEccccccccccccccccccccccccccEEEEcccccEEEccccccccccEEEEEEEcc
ccHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHccccccHHHHHHHccccccccHHHHHHHcHHHHHHcccHHHHHHHHHHHHHccccccccccccccccccHccEEEccccHHHHHHHHHHHHHHcccHHHHHHHHHHHccccccccccccccccccccccccHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHccccEEccccHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHccccHHHHHHHHHHHHccHHHHHHHHHcccHHHHHHHHHcccccccccccccccHEEEHHHHHHHcccHHHHHHHHHHHHHHHcccEEEEcccccccccccHHHHHHHHccccccHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHccccccccEEEEEEcccccccEccccccccccccEEEccccccccccccccEEEEEccccccEEEEEEEEccEEEcccccEEEEEEEcccccccccEEEEEEEcccccccEEEEEEEcccHHcccccEEEEccEEEcccccccEEEEEEEcccccEEEEEEcccEEEEEccccccccccEEEEEEccEEEEEcccccccccccccccccccccccccccccEEEEcccccccEEEEccccccEEEEcccccccccEEEEEEEEEEcccccccHHHccHHHHcccEEEEEEcccccEEEEEcccccEEEEEcccccccccEEEEEccccccccEEEEEccccccEEEEEEccccEEEEEEccccccHHHHHHHHHHHcccccccccEEEEEccccccEccccHHcccccEEEEEEEEcc
MKGFELLNLFIVLLSCISASARecsnklpeshQLRYHLLTSKNETWKQEVLNhyhltpsddsawssllprkilreeedDEFSWAMMYRKMknpgefkipedkfledvslhdvrlgkdSMHWRAQQTNLEYLLMLDVDRLVWSFRKtaglrtkgnayggwedptsqlrghFVGHYLSASALMWASTHNDTLKEKMSAVVSALSHCQKKigsgylsafpsryfdhlealkpvwapyyTIHKILAGLLDQYKYADNAHALKMATRMVEYFYNRVQKVIRKYSVARHWQylneepggmnDVLYRLFSITKDPRHLFLAHLFAKPCFLGLLavqsndisdfhvnthiplvigtqRRYELTGELLHKEMGTFFMDLvnsshtyatggtsvgefwrdpkrlattlgtnneesctTYNMLKVSRNLFRWTKESAYADFYERALINGVLsiqrgtspgvmiymlplgpgsskqtdngwgtpfdsfwccygtgiesfsklgdsiyfeekgkipgLYIIQYISSsfdwksgqivlnqkvdpvvssdpylritltfspkgagkastlnlripswsnsngakamlngqslalpspgnslsvtktwssddkltihlplslwteaikddrpkyASLQAILYGpyllaghsegdwnITKTAKSlsdwitpipvsynshlvtfskesrkskfvltssnpsiiTMEKFHKFGTDTAVRATFRLIILedsssfkyssyrdfigksvmlepfshpgmlvapkgkhhelvvtnssraegssVFRLVsgldgkdntvsleskshkgcyvyslksgksmtlrchkkskkpkfnHAVSFVMEkgkskyhpisfvakgtnrnyllepllsfrdesyTVYFNIQA
MKGFELLNLFIVLLSCISASARECSNKLPESHQLRYHLLTSKNETWKQEVLNHYhltpsddsawssLLPRKILREEEDDEFSWAMMYRKMKNPGEFKIPEDKFLEDVSLHDVRLGKDSMHWRAQQTNLEYLLMLDVDRLVWSFRKTAglrtkgnayggwEDPTSQLRGHFVGHYLSASALMWASTHNDTLKEKMSAVVSALSHCQKKIGSGYLSAFPSRYFDHLEALKPVWAPYYTIHKILAGLLDQYKYADNAHALKMATRMVEYFYNRVQKVIRKYSVARHWQYLNEEPGGMNDVLYRLFSITKDPRHLFLAHLFAKPCFLGLLAVQSNDISDFHVNTHIPLVIGTQRRYELTGELLHKEMGTFFMDLVNSSHTYATGgtsvgefwrdPKRLAttlgtnneescttynMLKVSRNLFRWTKESAYADFYERALINGVLSIQRGTSPGVMIYMLPLGPGSSKQTDNGWGTPFDSFWCCYGTGIESFSKLGDSIYFEEKGKIPGLYIIQYISSSFDWKSGQIVLNQKVDPVVSSDPYLRITltfspkgagkasTLNLRIPSWSNSNGAKAMLNGQSLALPSPGNSLSVTKTWSSDDKLTIHLPLSLWTEAIKDDRPKYASLQAILYGPYLLAGHSEGDWNITKTAKSLSDWITPIPVSYNSHLVtfskesrkskfvltssnpsiitmeKFHKFGTDTAVRATFRLIIledsssfkySSYRDFIGKSVMLEPFSHPGMLVAPKGKHHELVVTnssraegssvFRLVSgldgkdntvsleskshkgcyvyslksgksmtlrchkkskkpkfnhAVSFVMEKGKSKYHPISFVAKGTNRNYLLEpllsfrdesyTVYFNIQA
MKGFELLNLFIVLLSCISASARECSNKLPESHQLRYHLLTSKNETWKQEVLNHYHLTPSDDSAWSSLLPRKILREEEDDEFSWAMMYRKMKNPGEFKIPEDKFLEDVSLHDVRLGKDSMHWRAQQTNLEYLLMLDVDRLVWSFRKTAGLRTKGNAYGGWEDPTSQLRGHFVGHYLSASALMWASTHNDTLKEKMSAVVSALSHCQKKIGSGYLSAFPSRYFDHLEALKPVWAPYYTIHKILAGLLDQYKYADNAHALKMATRMVEYFYNRVQKVIRKYSVARHWQYLNEEPGGMNDVLYRLFSITKDPRHLFLAHLFAKPCFLGLLAVQSNDISDFHVNTHIPLVIGTQRRYELTGELLHKEMGTFFMDLVNSSHTYATGGTSVGEFWRDPKRLATTLGTNNEESCTTYNMLKVSRNLFRWTKESAYADFYERALINGVLSIQRGTSPGVMIYMLPLGPGSSKQTDNGWGTPFDSFWCCYGTGIESFSKLGDSIYFEEKGKIPGLYIIQYISSSFDWKSGQIVLNQKVDPVVSSDPYLRITLTFSPKGAGKASTLNLRIPSWSNSNGAKAMLNGQSLALPSPGNSLSVTKTWSSDDKLTIHLPLSLWTEAIKDDRPKYASLQAILYGPYLLAGHSEGDWNITKTAKSLSDWITPIPVSYNSHLVTFSKESRKSKFVLTSSNPSIITMEKFHKFGTDTAVRATFRLIILEDSSSFKYSSYRDFIGKSVMLEPFSHPGMLVAPKGKHHELVVTNSSRAEGSSVFRLVSGLDGKDNTVSLESKSHKGCYVYSLKSGKSMTLRCHKKSKKPKFNHAVSFVMEKGKSKYHPISFVAKGTNRNYLLEPLLSFRDESYTVYFNIQA
***FELLNLFIVLLSCISASARECSNKLPESHQLRYHLLTSKNETWKQEVLNHYHLTPSDDSAWSSLLPRKIL******EFSWAMMYRKMKNPGEFKIPEDKFLEDVSLHDVRLGKDSMHWRAQQTNLEYLLMLDVDRLVWSFRKTAGLRTKGNAYGGWEDPTSQLRGHFVGHYLSASALMWASTHNDTLKEKMSAVVSALSHCQKKIGSGYLSAFPSRYFDHLEALKPVWAPYYTIHKILAGLLDQYKYADNAHALKMATRMVEYFYNRVQKVIRKYSVARHWQYLNEEPGGMNDVLYRLFSITKDPRHLFLAHLFAKPCFLGLLAVQSNDISDFHVNTHIPLVIGTQRRYELTGELLHKEMGTFFMDLVNSSHTYATGGTSVGEFWRDPKRLATTLGTNNEESCTTYNMLKVSRNLFRWTKESAYADFYERALINGVLSIQRGTSPGVMIYMLPLGPG****TDNGWGTPFDSFWCCYGTGIESFSKLGDSIYFEEKGKIPGLYIIQYISSSFDWKSGQIVLNQKVDPVVSSDPYLRITLTFSPK*******L*L*********************************TWSSDDKLTIHLPLSLWTEAIKDDRPKYASLQAILYGPYLLAGHSEGDWNITKTAKSLSDWITPIPVSYNSHLVTFSK*****KFVLTSSNPSIITMEKFHKFGTDTAVRATFRLIILEDSSSFKYSSYRDFIGKSVMLEPFSHPGMLVAP******LV************FRLV******************GCYVYSL************************FVMEKGKSKYHPISFVAKGTNRNYLLEPLLSFRDESYTVYFNI**
***FELLNLFIVLLSCISASARECSNKLPESHQLRYHLLTSK**TWKQEVLNHYHLTPSDDSAWSSLLP*******EDDEFSWAMM*****************LEDVSLHDVRLGKDSMHWRAQQTNLEYLLMLDVDRLVWSFRKTAGLRTKGNAYGGWEDPTSQLRGHFVGHYLSASALMWASTHNDTLKEKMSAVVSALSHCQKKIGSGYLSAFPSRYFDHLEALKPVWAPYYTIHKILAGLLDQYKYADNAHALKMATRMVEYFYNRVQKVIRKYSVARHWQYLNEEPGGMNDVLYRLFSITKDPRHLFLAHLFAKPCFLGLLAVQSNDISDFHVNTHIPLVIGTQRRYELTGELLHKEMGTFFMDLVNSSHTYATGGTSVGEFWRDPKRLATTLGTNNEESCTTYNMLKVSRNLFRWTKESAYADFYERALINGVLSIQRGTSPGVMIYMLPLGPGSSKQTDNGWGTPFDSFWCCYGTGIESFSKLGDSIYFEEKGKIPGLYIIQYISSSFDWKSGQIVLNQKVDPVVSSDPYLRITLTFSPKGAGKASTLNLRIPSWSNSNGAKAMLNGQSLALPSPGNSLSVTKTWSSDDKLTIHLPLSLWTEAIKDDRPKYASLQAILYGPYLLAGHSEGDWNITKTAKSLSDWITPIPVSYNSHLVTFSKESRKSKFVLTSSNPSIITMEKFHKFGTDTAVRATFRLIILEDSS******************PFSHPGMLVAPKGKHH*********AEGSSVFRLVSGLDGKDNTVSLESKSHKGCYVYSLKSGKSMT**********KFNHAVSFVMEKGKSKYHPISFVAKGTNRNYLLEPLLSFRDESYTVYFNIQA
MKGFELLNLFIVLLSCISASARECSNKLPESHQLRYHLLTSKNETWKQEVLNHYHLTPSDDSAWSSLLPRKILREEEDDEFSWAMMYRKMKNPGEFKIPEDKFLEDVSLHDVRLGKDSMHWRAQQTNLEYLLMLDVDRLVWSFRKTAGLRTKGNAYGGWEDPTSQLRGHFVGHYLSASALMWASTHNDTLKEKMSAVVSALSHCQKKIGSGYLSAFPSRYFDHLEALKPVWAPYYTIHKILAGLLDQYKYADNAHALKMATRMVEYFYNRVQKVIRKYSVARHWQYLNEEPGGMNDVLYRLFSITKDPRHLFLAHLFAKPCFLGLLAVQSNDISDFHVNTHIPLVIGTQRRYELTGELLHKEMGTFFMDLVNSSHTYATGGTSVGEFWRDPKRLATTLGTNNEESCTTYNMLKVSRNLFRWTKESAYADFYERALINGVLSIQRGTSPGVMIYMLPLGPGSSKQTDNGWGTPFDSFWCCYGTGIESFSKLGDSIYFEEKGKIPGLYIIQYISSSFDWKSGQIVLNQKVDPVVSSDPYLRITLTFSPKGAGKASTLNLRIPSWSNSNGAKAMLNGQSLALPSPGNSLSVTKTWSSDDKLTIHLPLSLWTEAIKDDRPKYASLQAILYGPYLLAGHSEGDWNITKTAKSLSDWITPIPVSYNSHLVTFSKESRKSKFVLTSSNPSIITMEKFHKFGTDTAVRATFRLIILEDSSSFKYSSYRDFIGKSVMLEPFSHPGMLVAPKGKHHELVVTNSSRAEGSSVFRLVSGLDGKDNTVSLESKSHKGCYVYSLKSGKSMTLRCHKKSKKPKFNHAVSFVMEKGKSKYHPISFVAKGTNRNYLLEPLLSFRDESYTVYFNIQA
*KGFELLNLFIVLLSCISASARECSNKLPESHQLRYHLLTSKNETWKQEVLNHYHLTPSDDSAWSSLLPRKILREEEDDEFSWAMMYRKMKNPGEFKIPEDKFLEDVSLHDVRLGKDSMHWRAQQTNLEYLLMLDVDRLVWSFRKTAGLRTKGNAYGGWEDPTSQLRGHFVGHYLSASALMWASTHNDTLKEKMSAVVSALSHCQKKIGSGYLSAFPSRYFDHLEALKPVWAPYYTIHKILAGLLDQYKYADNAHALKMATRMVEYFYNRVQKVIRKYSVARHWQYLNEEPGGMNDVLYRLFSITKDPRHLFLAHLFAKPCFLGLLAVQSNDISDFHVNTHIPLVIGTQRRYELTGELLHKEMGTFFMDLVNSSHTYATGGTSVGEFWRDPKRLATTLGTNNEESCTTYNMLKVSRNLFRWTKESAYADFYERALINGVLSIQRGTSPGVMIYMLPLGPGSSKQTDNGWGTPFDSFWCCYGTGIESFSKLGDSIYFEEKGKIPGLYIIQYISSSFDWKSGQIVLNQKVDPVVSSDPYLRITLTFSPKGAGKASTLNLRIPSWSNSNGAKAMLNGQSLALPSPGNSLSVTKTWSSDDKLTIHLPLSLWTEAIKDDRPKYASLQAILYGPYLLAGHSEGDWNITKTAKSLSDWITPIPVSYNSHLVTFSKESRKSKFVLTSSNPSIITMEKFHKFGTDTAVRATFRLIILEDSSSFKYSSYRDFIGKSVMLEPFSHPGMLVAPKGKHHELVVTNSSRAEGSSVFRLVSGLDGKDNTVSLESKSHKGCYVYSLKSGKSMTLRCHKKSKKPKFNHAVSFVMEKGKSKYHPISFVAKGTNRNYLLEPLLSFRDESYTVYFNIQA
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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oooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
SSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MKGFELLNLFIVLLSCISASARECSNKLPESHQLRYHLLTSKNETWKQEVLNHYHLTPSDDSAWSSLLPRKILREEEDDEFSWAMMYRKMKNPGEFKIPEDKFLEDVSLHDVRLGKDSMHWRAQQTNLEYLLMLDVDRLVWSFRKTAGLRTKGNAYGGWEDPTSQLRGHFVGHYLSASALMWASTHNDTLKEKMSAVVSALSHCQKKIGSGYLSAFPSRYFDHLEALKPVWAPYYTIHKILAGLLDQYKYADNAHALKMATRMVEYFYNRVQKVIRKYSVARHWQYLNEEPGGMNDVLYRLFSITKDPRHLFLAHLFAKPCFLGLLAVQSNDISDFHVNTHIPLVIGTQRRYELTGELLHKEMGTFFMDLVNSSHTYATGGTSVGEFWRDPKRLATTLGTNNEESCTTYNMLKVSRNLFRWTKESAYADFYERALINGVLSIQRGTSPGVMIYMLPLGPGSSKQTDNGWGTPFDSFWCCYGTGIESFSKLGDSIYFEEKGKIPGLYIIQYISSSFDWKSGQIVLNQKVDPVVSSDPYLRITLTFSPKGAGKASTLNLRIPSWSNSNGAKAMLNGQSLALPSPGNSLSVTKTWSSDDKLTIHLPLSLWTEAIKDDRPKYASLQAILYGPYLLAGHSEGDWNITKTAKSLSDWITPIPVSYNSHLVTFSKESRKSKFVLTSSNPSIITMEKFHKFGTDTAVRATFRLIILEDSSSFKYSSYRDFIGKSVMLEPFSHPGMLVAPKGKHHELVVTNSSRAEGSSVFRLVSGLDGKDNTVSLESKSHKGCYVYSLKSGKSMTLRCHKKSKKPKFNHAVSFVMEKGKSKYHPISFVAKGTNRNYLLEPLLSFRDESYTVYFNIQA
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query859
224053368858 predicted protein [Populus trichocarpa] 0.989 0.990 0.692 0.0
224075776858 predicted protein [Populus trichocarpa] 0.982 0.983 0.699 0.0
225435510864 PREDICTED: uncharacterized protein LOC10 0.989 0.983 0.681 0.0
359478753874 PREDICTED: uncharacterized protein LOC10 0.974 0.957 0.673 0.0
356541912854 PREDICTED: uncharacterized protein LOC10 0.983 0.989 0.664 0.0
356541181854 PREDICTED: uncharacterized protein LOC10 0.981 0.987 0.666 0.0
449448754868 PREDICTED: uncharacterized protein LOC10 0.975 0.965 0.657 0.0
15239944861 uncharacterized protein [Arabidopsis tha 0.988 0.986 0.629 0.0
297807309860 hypothetical protein ARALYDRAFT_350453 [ 0.973 0.972 0.633 0.0
356557388841 PREDICTED: uncharacterized protein LOC10 0.960 0.980 0.646 0.0
>gi|224053368|ref|XP_002297785.1| predicted protein [Populus trichocarpa] gi|222845043|gb|EEE82590.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
 Score = 1221 bits (3159), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 600/867 (69%), Positives = 702/867 (80%), Gaps = 17/867 (1%)

Query: 1   MKGFELLNLFIVLLSCISASARECSNKLPE--SHQLRYHLLTSKNETWKQEVLNHYHLTP 58
           MKG  L+ L ++ + C   +++EC+N   +  SH  RY LL+S+NETWK+E+  HYHLTP
Sbjct: 1   MKG--LIVLVVLSMLCGFGTSKECTNTPTQLSSHTFRYALLSSENETWKEEMFAHYHLTP 58

Query: 59  SDDSAWSSLLPRKILREEEDDEFSWAMMYRKMKNPGEFKIPEDKFLEDVSLHDVRLGKDS 118
           +DDSAW++LLPRKILREE  DE+SWAMMYR +K+P +       FL++VSLH+VRL   S
Sbjct: 59  TDDSAWANLLPRKILREE--DEYSWAMMYRNLKSPLK---SSGNFLKEVSLHNVRLDPSS 113

Query: 119 MHWRAQQTNLEYLLMLDVDRLVWSFRKTAGLRTKGNAYGGWEDPTSQLRGHFVGHYLSAS 178
           +HW+AQQTNLEYLLMLDVD LVWSFRKTAGL T G AYGGWE P  +LRGHFVGHYLSAS
Sbjct: 114 IHWQAQQTNLEYLLMLDVDSLVWSFRKTAGLSTPGTAYGGWEAPNCELRGHFVGHYLSAS 173

Query: 179 ALMWASTHNDTLKEKMSAVVSALSHCQKKIGSGYLSAFPSRYFDHLEALKPVWAPYYTIH 238
           A MWASTHND L+++MSAVVSALS CQ+K+GSGYLSAFPS  FD  EA+KPVWAPYYTIH
Sbjct: 174 AQMWASTHNDILEKQMSAVVSALSSCQEKMGSGYLSAFPSELFDRFEAIKPVWAPYYTIH 233

Query: 239 KILAGLLDQYKYADNAHALKMATRMVEYFYNRVQKVIRKYSVARHWQYLNEEPGGMNDVL 298
           KILAGLLDQY +ADNA ALKM   MV+YFYNRV+ VI  +SV RH+Q LNEE GGMNDVL
Sbjct: 234 KILAGLLDQYTFADNAQALKMVKWMVDYFYNRVRNVITNFSVERHYQSLNEETGGMNDVL 293

Query: 299 YRLFSITKDPRHLFLAHLFAKPCFLGLLAVQSNDISDFHVNTHIPLVIGTQRRYELTGEL 358
           Y+LFSIT DP+HL LAHLF KPCFLGLLAVQ+ DIS FH NTHIP+VIG Q RYE+TG+ 
Sbjct: 294 YKLFSITGDPKHLVLAHLFDKPCFLGLLAVQAEDISGFHANTHIPIVIGAQMRYEITGDP 353

Query: 359 LHKEMGTFFMDLVNSSHTYATGGTSVGEFWRDPKRLATTLGTNNEESCTTYNMLKVSRNL 418
           L+K++GTFFMD+VNSSH+YATGGTSV EFW DPKRLA+TL T NEESCTTYNMLKVSR+L
Sbjct: 354 LYKDIGTFFMDIVNSSHSYATGGTSVSEFWSDPKRLASTLQTENEESCTTYNMLKVSRHL 413

Query: 419 FRWTKESAYADFYERALINGVLSIQRGTSPGVMIYMLPLGPGSSK-QTDNGWGTPFDSFW 477
           FRWTKE AYAD+YERAL NGVL IQRGT PGVMIYMLP  PGSSK ++ +GWGT +D+FW
Sbjct: 414 FRWTKEMAYADYYERALTNGVLGIQRGTEPGVMIYMLPQHPGSSKGKSYHGWGTLYDTFW 473

Query: 478 CCYGTGIESFSKLGDSIYFEEKGKIPGLYIIQYISSSFDWKSGQIVLNQKVDPVVSSDPY 537
           CCYGTGIESFSKLGDSIYFEE+G+ PGLYIIQYISSS DWKSGQI++NQKVDPVVSSDPY
Sbjct: 474 CCYGTGIESFSKLGDSIYFEEEGEAPGLYIIQYISSSLDWKSGQIMINQKVDPVVSSDPY 533

Query: 538 LRITLTFSP-KGAGKASTLNLRIPSWSNSNGAKAMLNGQSLALPSPGNSLSVTKTWSSDD 596
           LR+T TFSP KG+ +ASTLNLRIP W++ +GA A +N QSLA+P+PG+ LSV + WSS D
Sbjct: 534 LRVTFTFSPNKGSSQASTLNLRIPVWTHLDGATATINSQSLAIPAPGSFLSVNRKWSSGD 593

Query: 597 KLTIHLPLSLWTEAIKDDRPKYASLQAILYGPYLLAGHSEGDWNI-TKTAKSLSDWITPI 655
           KL++ LP+SL TEAI+DDR +YAS+QAILYGPYLLAGH+ GDWN+   +A SLSD ITPI
Sbjct: 594 KLSLQLPISLRTEAIQDDRHQYASIQAILYGPYLLAGHTSGDWNLKAGSAGSLSDSITPI 653

Query: 656 PVSYNSHLVTFSKESRKSKFVLTSSNPSIITMEKFHKFGTDTAVRATFRLIILEDSSSFK 715
           P SYN  LV+FS++S  S FVLT+SN S ITME+  K GTD  ++ATFR I+  DSSS +
Sbjct: 654 PASYNEQLVSFSQDSGNSTFVLTNSNQS-ITMEEHPKSGTDACLQATFR-IVFNDSSSSE 711

Query: 716 YSSYRDFIGKSVMLEPFSHPGMLVAPKGKHHELVVTNSSRAEGSSVFRLVSGLDGKDNTV 775
                D I KSVMLEPF  PGML+  +GK   L VTNS+  +GSS+F +V GLDGKD TV
Sbjct: 712 VLGINDVIDKSVMLEPFDLPGMLLVQQGKDSSLAVTNSAADDGSSIFHVVLGLDGKDGTV 771

Query: 776 SLESKSHKGCYVYS---LKSGKSMTLRCHKKSKKPKFNHAVSFVMEKGKSKYHPISFVAK 832
           SLES S +GCY+YS    KSG+SM L C   S  P FN   SFVM KG S+YHPISFVA+
Sbjct: 772 SLESGSQEGCYIYSGVNYKSGQSMKLSCKLGSSDPGFNQGASFVMNKGLSEYHPISFVAE 831

Query: 833 GTNRNYLLEPLLSFRDESYTVYFNIQA 859
           G  RN+LL PL S RDE YT+YFNIQA
Sbjct: 832 GDKRNFLLAPLHSLRDEFYTIYFNIQA 858

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|224075776|ref|XP_002304762.1| predicted protein [Populus trichocarpa] gi|222842194|gb|EEE79741.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|225435510|ref|XP_002285548.1| PREDICTED: uncharacterized protein LOC100246702 [Vitis vinifera] Back     alignment and taxonomy information
>gi|359478753|ref|XP_002283032.2| PREDICTED: uncharacterized protein LOC100250068 [Vitis vinifera] Back     alignment and taxonomy information
>gi|356541912|ref|XP_003539416.1| PREDICTED: uncharacterized protein LOC100783150 [Glycine max] Back     alignment and taxonomy information
>gi|356541181|ref|XP_003539059.1| PREDICTED: uncharacterized protein LOC100781521 [Glycine max] Back     alignment and taxonomy information
>gi|449448754|ref|XP_004142130.1| PREDICTED: uncharacterized protein LOC101207833 [Cucumis sativus] Back     alignment and taxonomy information
>gi|15239944|ref|NP_196799.1| uncharacterized protein [Arabidopsis thaliana] gi|7630051|emb|CAB88259.1| putative protein [Arabidopsis thaliana] gi|26451123|dbj|BAC42665.1| unknown protein [Arabidopsis thaliana] gi|332004451|gb|AED91834.1| uncharacterized protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|297807309|ref|XP_002871538.1| hypothetical protein ARALYDRAFT_350453 [Arabidopsis lyrata subsp. lyrata] gi|297317375|gb|EFH47797.1| hypothetical protein ARALYDRAFT_350453 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|356557388|ref|XP_003546998.1| PREDICTED: uncharacterized protein LOC100815634 [Glycine max] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query859
TAIR|locus:2182280861 AT5G12950 [Arabidopsis thalian 0.987 0.984 0.633 2e-294
TAIR|locus:2182295865 AT5G12960 [Arabidopsis thalian 0.973 0.966 0.635 6.9e-292
UNIPROTKB|Q2KGY9633 MGCH7_ch7g196 "Putative unchar 0.585 0.794 0.349 4e-74
TAIR|locus:2182280 AT5G12950 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 2827 (1000.2 bits), Expect = 2.0e-294, P = 2.0e-294
 Identities = 551/870 (63%), Positives = 661/870 (75%)

Query:     1 MKGFELLNLFIVLL--SCISAS-ARECSNKLPE--SHQLRYHLLTSKNETWKQEVLNHYH 55
             MK   ++ + ++L   S +  S A+EC+N   +  SH  R  LL SKNET K E+ +HYH
Sbjct:     1 MKSGLIITIALLLYTSSFVLVSVAKECTNTPTQLSSHTFRSELLQSKNETLKTELFSHYH 60

Query:    56 LTPSDDSAWSSLLPRKILREEEDDEFSWAMMYRKMKNPGEFKIPEDKFLEDVSLHDVRLG 115
             LTP+DDSAWSSLLPRK+L+EE D EF+W M+YRK K+          FL+DVSLHDVRL 
Sbjct:    61 LTPADDSAWSSLLPRKMLKEEAD-EFAWTMLYRKFKDSNS----SGNFLKDVSLHDVRLD 115

Query:   116 KDSMHWRAQQTNLEYLLMLDVDRLVWSFRKTAGLRTKGNAYGGWEDPTSQLRGHFVGHYL 175
              DS HWRAQQTNLEYLLMLDVD L WSFRK AGL   G+ YGGWE P S+LRGHFVGHYL
Sbjct:   116 PDSFHWRAQQTNLEYLLMLDVDGLAWSFRKEAGLDAPGDYYGGWERPDSELRGHFVGHYL 175

Query:   176 SASALMWASTHNDTLKEKMSAVVSALSHCQKKIGSGYLSAFPSRYFDHLEALKPVWAPYY 235
             SA+A MWASTHNDTLKEKMSA+VSALS CQ+K G+GYLSAFPS +FD  EA+ PVWAPYY
Sbjct:   176 SATAYMWASTHNDTLKEKMSALVSALSECQQKSGTGYLSAFPSSFFDRFEAITPVWAPYY 235

Query:   236 TIHKILAGLLDQYKYADNAHALKMATRMVEYFYNRVQKVIRKYSVARHWQYLNEEPGGMN 295
             TIHKILAGL+DQYK A N+ ALKMAT M +YFY RV+ VIRKYSV RHWQ LNEE GGMN
Sbjct:   236 TIHKILAGLVDQYKLAGNSQALKMATGMADYFYGRVRNVIRKYSVERHWQSLNEETGGMN 295

Query:   296 DVLYRLFSITKDPRHLFLAHLFAKPCFLGLLAVQSNDISDFHVNTHIPLVIGTQRRYELT 355
             DVLY+L+SIT D ++L LAHLF KPCFLG+LA+Q++DIS FH NTHIP+V+G+Q+RYE+T
Sbjct:   296 DVLYQLYSITGDSKYLLLAHLFDKPCFLGVLAIQADDISGFHANTHIPIVVGSQQRYEIT 355

Query:   356 GELLHKEMGTFFMDLVNSSHTYATGGTSVGEFWRDPKRLATTLGTNNEESCTTYNMLKVS 415
             G+LLHKE+  FFMD+ N+SH+YATGGTSV EFW+DPKR+AT L T NEESCTTYNMLKVS
Sbjct:   356 GDLLHKEISMFFMDIFNASHSYATGGTSVSEFWQDPKRMATALQTENEESCTTYNMLKVS 415

Query:   416 RNLFRWTKESAYADFYERALINGVLSIQRGTSPGVMIYMLPLGPGSSKQ-TDNGWGTPFD 474
             RNLFRWTKE +YAD+YERAL NGVL IQRGT PG+MIYMLPLG G SK  T +GWGTP+D
Sbjct:   416 RNLFRWTKEVSYADYYERALTNGVLGIQRGTQPGLMIYMLPLGKGVSKAVTYHGWGTPYD 475

Query:   475 SFWCCYGTGIESFSKLGDSIYFEEKGKIPGLYIIQYISSSFDWKSGQIVLNQKVDPVVSS 534
             SFWCCYGTGIESFSKLGDSIYF+E G  P LY+ QYISSS DWKS  + ++QKV+PVVS 
Sbjct:   476 SFWCCYGTGIESFSKLGDSIYFQEDGATPALYVTQYISSSLDWKSAGLSISQKVNPVVSW 535

Query:   535 DPYLRITLTFSPK--GAGKASTLNLRIPSWSNSNGAKAMLNGQSLALPSPGNSLSVTKTW 592
             DPY+R+T T S    G  K STLNLRIP W+NS GAK  LNG+ L +P+ GN LS+ + W
Sbjct:   536 DPYMRVTFTLSSSKVGVAKESTLNLRIPVWTNSIGAKVSLNGRPLNVPTSGNFLSIKQKW 595

Query:   593 SSDDKLTIHLPLSLWTEAIKDDRPKYASLQAILYGPYLLAGHSEGDWNITKTAKSLSDWI 652
              S D++T+ LP+S+ TEAIKDDRP+YASLQAILYGPYLLAGH+  DW+IT  AK    WI
Sbjct:   596 KSGDQVTMELPMSIRTEAIKDDRPEYASLQAILYGPYLLAGHTSRDWSITTQAKP-GKWI 654

Query:   653 TPIPVSYNSHLVTFSKESRKSKFVLTSSNPSIITMEKFHKFGTDTAVRATFRLIILEDSS 712
             TPIP + NS+LVT S++S    +V ++SN +I TM    + GT  AV ATFRL+   D+S
Sbjct:   655 TPIPETQNSYLVTLSQQSGNVSYVFSNSNQTI-TMRVSPEPGTQDAVAATFRLVT--DNS 711

Query:   713 SFKYSSYRDFIGKSVMLEPFSHPGMLVAPKGKHHELVVTNSSRAE-GSSVFRLVSGLDGK 771
               + S     IG+ VMLEPF  PGM+V  +     L V  SS ++ G+S FRLVSGLDGK
Sbjct:   712 KPRISGPEGLIGRLVMLEPFDFPGMIVK-QATDSSLTVQASSPSDKGASSFRLVSGLDGK 770

Query:   772 DNTVSLESKSHKGCYVYS---LKSGKSMTLRCHKKSKKPKFNHAVSFVMEKGKSKYHPIS 828
               +VSL  +S KGC+VYS   LK G  + L C   +   KF  A SF ++ G  +Y+P+S
Sbjct:   771 LGSVSLRLESKKGCFVYSDQTLKQGTKLRLECGSDATDEKFKEAASFSLKTGMHQYNPMS 830

Query:   829 FVAKGTNRNYLLEPLLSFRDESYTVYFNIQ 858
             FV  GT RN++L PL S RDE+Y VYF++Q
Sbjct:   831 FVMSGTQRNFVLSPLFSLRDETYNVYFSVQ 860
GO:0003824 "catalytic activity" evidence=IEA
GO:0005576 "extracellular region" evidence=ISM
GO:0005773 "vacuole" evidence=IDA
GO:0009505 "plant-type cell wall" evidence=IDA
TAIR|locus:2182295 AT5G12960 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|Q2KGY9 MGCH7_ch7g196 "Putative uncharacterized protein" [Magnaporthe oryzae 70-15 (taxid:242507)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query859
pfam07944511 pfam07944, DUF1680, Putative glycosyl hydrolase of 1e-159
COG3533589 COG3533, COG3533, Uncharacterized protein conserve 3e-63
>gnl|CDD|219654 pfam07944, DUF1680, Putative glycosyl hydrolase of unknown function (DUF1680) Back     alignment and domain information 
 Score =  474 bits (1222), Expect = e-159
 Identities = 199/532 (37%), Positives = 277/532 (52%), Gaps = 31/532 (5%)

Query: 111 DVRLGKDSMHWRAQQTNLEYLLMLDVDRLVWSFRKTAGLRTKGNAYGGWED--PTSQLRG 168
           DVRL  DS     QQTN EYLL LD DRL+ +FR  AGL  K  AYGGWED  P    RG
Sbjct: 1   DVRL-TDSFWGDRQQTNREYLLPLDPDRLLHTFRLEAGLPNKAIAYGGWEDEFPGFPFRG 59

Query: 169 HFVGHYLSASALMWASTHNDTLKEKMSAVVSALSHCQKKIGSGYLSAFPSRYFDHLEALK 228
           H +G +LSA A M AST +  L++++  +V  L+  Q+  G GYL  +P   FD  EA  
Sbjct: 60  HDLGKWLSAVAYMLASTPDPELEKRLDRLVDELAEAQQ--GDGYLGTYPESNFDRNEAGN 117

Query: 229 PVWAP---YYTIHKILAGLLDQYKYADNAHALKMATRMVEYFYNRVQKVIRKYSVARHWQ 285
             WAP    Y + K++AGL+  Y+      AL +ATR+ ++ Y+ V  V+    + +H  
Sbjct: 118 GRWAPNHELYNLGKLIAGLVAYYQATGKRQALDVATRLADWLYD-VTSVLGDEQMQKHLY 176

Query: 286 YLNEEPGGMNDVLYRLFSITKDPRHLFLAHLFAKPCFLGLLAVQSNDISDFHVNTHIP-L 344
               E GG+N+ L  L+ +T D R+L LA  F     L  LA   + +   H NT I   
Sbjct: 177 ---PEHGGINEALVELYELTGDKRYLDLAKRFIHNRGLDPLAYGQDHLPGRHQNTAIGHA 233

Query: 345 VIGTQRRYELTGELLHKEMGTFFMDLVNSSHTYATGGTSVG-EFWRDPKRLATTLGTNNE 403
           V G    YE TG+    +   FF + V + H Y TGG     E +  P  L   L     
Sbjct: 234 VRGAADLYEETGDDALLKAAEFFWNNVVTRHMYVTGGNGSRHEHFGPPYDLPNRLAYC-- 291

Query: 404 ESCTTYNMLKVSRNLFRWTKESAYADFYERALINGVLSIQRGTSPGVMIYMLPLGPGSSK 463
           E+C +YNMLK++R +  WT ++ YAD+YERAL N +L+ Q     G+  Y  PL  G  +
Sbjct: 292 ETCASYNMLKLTRRMLEWTPDAKYADYYERALYNHILAGQSPDG-GMFFYFNPLESGPKR 350

Query: 464 QTDNGWGTPFDSFWCCYGTGIESFSKLGDSIYFEEKGKIPGLYIIQYISSSFDWK--SGQ 521
               G+ TP+DS WCC G G E+ +K GD IY        GLY+  YI S+ DWK   G+
Sbjct: 351 L-RWGYSTPWDSCWCCPGNGAETHAKFGDYIYTHSD---DGLYVNLYIPSTADWKLKGGE 406

Query: 522 IVLNQKVDPVVSSDPYLRITLTFSPKGAGKASTLNLRIPSWSNSNGAKAMLNGQSLAL-P 580
           + L Q+ +     D  +R+T+           TL LRIP W  + GA   +NG+ + + P
Sbjct: 407 VTLRQETN--YPWDGQVRLTVK---TAKPAEFTLYLRIPGW--AAGATLTVNGKPVVVQP 459

Query: 581 SPGNSLSVTKTWSSDDKLTIHLPLSLWTEAIKDDRPKYASLQAILYGPYLLA 632
                LS+T+ W   D++ + LP+ +  EA     P  A+  A+L GP +L 
Sbjct: 460 KSDGYLSITREWKKGDRVELTLPMPVRLEAANPLVPDDANKVAVLRGPLVLC 511

The members of this family are sequences derived from hypothetical bacterial and eukaryotic proteins of unknown function. One members of this family is annotated as a possible arabinosidase, but no references were found to back this. These proteins are related to a large family of glycosyl hydrolases. Length = 511
>gnl|CDD|226063 COG3533, COG3533, Uncharacterized protein conserved in bacteria [Function unknown] Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 859
PF07944520 DUF1680: Putative glycosyl hydrolase of unknown fu 100.0
COG3533589 Uncharacterized protein conserved in bacteria [Fun 100.0
PF05270142 AbfB: Alpha-L-arabinofuranosidase B (ABFB); InterP 99.71
PF05270142 AbfB: Alpha-L-arabinofuranosidase B (ABFB); InterP 99.33
cd00249384 AGE AGE domain; N-acyl-D-glucosamine 2-epimerase d 98.82
cd00249384 AGE AGE domain; N-acyl-D-glucosamine 2-epimerase d 98.11
PF03663370 Glyco_hydro_76: Glycosyl hydrolase family 76 ; Int 97.83
PF07944520 DUF1680: Putative glycosyl hydrolase of unknown fu 97.8
PF03663370 Glyco_hydro_76: Glycosyl hydrolase family 76 ; Int 97.7
COG1331667 Highly conserved protein containing a thioredoxin 97.69
cd04791321 LanC_SerThrkinase Lanthionine synthetase C-like do 97.58
PF07470336 Glyco_hydro_88: Glycosyl Hydrolase Family 88; Inte 97.45
cd04791321 LanC_SerThrkinase Lanthionine synthetase C-like do 97.43
COG3533589 Uncharacterized protein conserved in bacteria [Fun 97.41
PTZ00470522 glycoside hydrolase family 47 protein; Provisional 97.19
COG1331667 Highly conserved protein containing a thioredoxin 97.07
PF07221346 GlcNAc_2-epim: N-acylglucosamine 2-epimerase (GlcN 96.87
cd04792825 LanM-like LanM-like proteins. LanM is a bifunction 96.65
cd04434343 LanC_like LanC-like proteins. LanC is the cyclase 96.42
PF07221346 GlcNAc_2-epim: N-acylglucosamine 2-epimerase (GlcN 96.0
PF07470336 Glyco_hydro_88: Glycosyl Hydrolase Family 88; Inte 95.68
cd04794343 euk_LANCL eukaryotic Lanthionine synthetase C-like 95.43
COG4403963 LcnDR2 Lantibiotic modifying enzyme [Defense mecha 95.39
COG4225357 Predicted unsaturated glucuronyl hydrolase involve 95.33
PF01532452 Glyco_hydro_47: Glycosyl hydrolase family 47; Inte 95.27
cd04792825 LanM-like LanM-like proteins. LanM is a bifunction 95.13
cd04434343 LanC_like LanC-like proteins. LanC is the cyclase 94.96
PF06662189 C5-epim_C: D-glucuronyl C5-epimerase C-terminus; I 94.88
PF00759444 Glyco_hydro_9: Glycosyl hydrolase family 9; InterP 93.84
cd04793382 LanC LanC is the cyclase enzyme of the lanthionine 93.54
PF01532452 Glyco_hydro_47: Glycosyl hydrolase family 47; Inte 93.3
PTZ00470522 glycoside hydrolase family 47 protein; Provisional 93.16
COG2942388 N-acyl-D-glucosamine 2-epimerase [Carbohydrate tra 92.79
PF06662189 C5-epim_C: D-glucuronyl C5-epimerase C-terminus; I 92.63
COG4225357 Predicted unsaturated glucuronyl hydrolase involve 92.6
COG2942388 N-acyl-D-glucosamine 2-epimerase [Carbohydrate tra 92.08
cd04794343 euk_LANCL eukaryotic Lanthionine synthetase C-like 91.91
KOG2244786 consensus Highly conserved protein containing a th 91.12
PLN02345469 endoglucanase 90.22
KOG2787403 consensus Lanthionine synthetase C-like protein 1 90.14
PLN02909486 Endoglucanase 88.36
cd04793382 LanC LanC is the cyclase enzyme of the lanthionine 86.01
PF05147355 LANC_like: Lanthionine synthetase C-like protein; 83.75
KOG2429622 consensus Glycosyl hydrolase, family 47 [Carbohydr 82.84
KOG2244786 consensus Highly conserved protein containing a th 82.11
KOG2787403 consensus Lanthionine synthetase C-like protein 1 80.55
PF06917557 Pectate_lyase_2: Periplasmic pectate lyase; InterP 80.36
>PF07944 DUF1680: Putative glycosyl hydrolase of unknown function (DUF1680); InterPro: IPR012878 The members of this family are sequences derived from hypothetical bacterial and eukaryotic proteins of unknown function Back     alignment and domain information 
Probab=100.00  E-value=1e-110  Score=975.72  Aligned_cols=499  Identities=37%  Similarity=0.633  Sum_probs=455.7

Q ss_pred             CEEeCCCCchHHHHHHHHHHHhhccchhhhHHHHHhcCCCCCCCCCCCCc--CCCCCccccchhhHHHHHHHHHHhcCCh
Q 044240          111 DVRLGKDSMHWRAQQTNLEYLLMLDVDRLVWSFRKTAGLRTKGNAYGGWE--DPTSQLRGHFVGHYLSASALMWASTHND  188 (859)
Q Consensus       111 ~VrL~~~~~~~~~~~~~~~yll~~d~drLL~nFr~~AGl~~~g~~~gGWe--~~dsdl~GH~~Gh~LsA~a~~~a~t~D~  188 (859)
                      +|||+ ++||+++|+++++|+|++++|||+++||..|||++++.++||||  +++..++||++||||||+|++|+.++|+
T Consensus         1 ~V~l~-~~~~~~~~~~~~~~~l~~~~d~ll~~~r~~agl~~~~~~~g~we~~~~~~~~~~~~~g~wl~a~a~~~~~~~D~   79 (520)
T PF07944_consen    1 DVRLT-DGFWKRRQELNRAYLLPLDPDRLLYNFRSHAGLPNFAIAYGGWEGEFPGWWFRGHDVGKWLEAAAYAYAYTGDP   79 (520)
T ss_pred             CeEEC-cHHHHHHHHHHHHHHHHhHHHHHhhhcCcccCCCCccccCCCCccCCCCCccCCCcHHHHHHHHHHHHHHCCCH
Confidence            69999 58999999999999999999999999999999999988999999  8889999999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHhhhCCCccccccCCchhhhccccCCCccc----chhhhHHHhHHHHHHHHhCChhHHHHHHHHH
Q 044240          189 TLKEKMSAVVSALSHCQKKIGSGYLSAFPSRYFDHLEALKPVWAP----YYTIHKILAGLLDQYKYADNAHALKMATRMV  264 (859)
Q Consensus       189 ~L~~k~d~~Vd~l~~~Q~~~~dGYL~a~~~~~~~r~~~l~~~w~p----yy~~HkI~aGLld~y~~tG~~~aL~va~~~a  264 (859)
                      +|++|++++|+.|++||+  +||||+++++..   ..+.+..|+|    +|+.|||+.||+|+|++|||+++|+|++|++
T Consensus        80 ~l~~~~d~~V~~l~~~Q~--~dGYl~~~~~~~---~~~~~~~w~~~~he~Y~~~~ll~gl~~~y~~tG~~~~L~v~~k~a  154 (520)
T PF07944_consen   80 ELKAKADEIVDELAAAQQ--PDGYLGTYPEER---NFNPDDRWAPDMHELYCLGKLLEGLIDYYEATGNERALDVATKLA  154 (520)
T ss_pred             HHHHHHHHHHHHHHHhcc--CCceeccccccc---ccccccCCCCCccceehHhHHHHHHHHHHHHHCcHHHHHHHHHHH
Confidence            999999999999999999  999999998653   2245678888    9999999999999999999999999999999


Q ss_pred             HHHHHHhhhhhhcccccccccccCCCCCchhHHHHHHHHhcCCHHHHHHHhhccccccccc--ccccCCCCCCCcccCCc
Q 044240          265 EYFYNRVQKVIRKYSVARHWQYLNEEPGGMNDVLYRLFSITKDPRHLFLAHLFAKPCFLGL--LAVQSNDISDFHVNTHI  342 (859)
Q Consensus       265 d~~~~~~~~~~~~~~~~~~~~~l~~E~GGmneaL~~LY~~TGd~ryL~LA~~f~~~~~~~~--la~~~d~l~~~Hanthi  342 (859)
                      ||+++++...    ..+.....+.+|+|||+++|+|||++|||++||+||++|++..+.++  +....|.+++.|+|+++
T Consensus       155 d~~~~~~~~~----~~~~~~~~~~~~~~~i~~~l~~LY~~Tgd~~yL~lA~~f~~~~~~~~~~~~~~~d~~~~~~a~~~~  230 (520)
T PF07944_consen  155 DWVYRRLSRL----GPEPGQKMGYPEHGGINEALVRLYEITGDERYLDLAEYFVDQRGFDPYDLAYGQDHLPGRHANTHI  230 (520)
T ss_pred             HHHHHHhccC----CHHHhhcccccccchHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCCchhhcCccCCCcccccee
Confidence            9996654432    22222334557899999999999999999999999999999999888  88889999999999999


Q ss_pred             ceee-------ehhhHHHhcCchHHHHHHHHHHHHhhccCeEeecCCCCC---CCCCCCCcccccCCcccccchhhHHHH
Q 044240          343 PLVI-------GTQRRYELTGELLHKEMGTFFMDLVNSSHTYATGGTSVG---EFWRDPKRLATTLGTNNEESCTTYNML  412 (859)
Q Consensus       343 P~~~-------G~a~~Y~~TGD~~y~~aa~~fwd~V~~~h~y~TGG~g~~---E~f~~~~~l~~~l~~~~~ETCas~nml  412 (859)
                      |.++       |++++|++|||++|++++++||++|+++|||+|||+|++   |+|++++++++  ...++|||++||||
T Consensus       231 ~h~vr~~y~~~g~a~~y~~tgd~~~~~a~~~~w~~v~~~~~y~tGg~g~~~~~E~f~~~~~lp~--~~~~~EtCas~~~~  308 (520)
T PF07944_consen  231 GHAVRAMYLYSGAADLYEETGDEEYLDAAENFWDNVVRHHMYATGGIGSDHEGEHFGPPYDLPN--RLAYAETCASVNMM  308 (520)
T ss_pred             eEEEEhhhhhhHHHHHHHHhCCHHHHHHHHHHHHHHHhcCeeccCCCcCCCCCccCCCCCCCCc--CCCCccccHHHHHH
Confidence            9998       999999999999999999999999999999999999999   99999999987  35569999999999


Q ss_pred             HHHHHhhcccCCchHHHHHHHHHhhhhhcccCCCCCCcEEEecCCCCCCCCCCCCCCCCCCCcccccCCCccchhhhccc
Q 044240          413 KVSRNLFRWTKESAYADFYERALINGVLSIQRGTSPGVMIYMLPLGPGSSKQTDNGWGTPFDSFWCCYGTGIESFSKLGD  492 (859)
Q Consensus       413 kl~~~Lf~~tgd~~YaD~~ERalyN~vLa~q~~~~~g~~~Y~~PL~~g~~k~~~~~~~t~~~~fwCC~gtg~e~~akl~~  492 (859)
                      |++++||++|||++|+|+|||++||++||+|++ |++.++|++||+++..+.....+++++++||||+||++|+++||++
T Consensus       309 ~~~~~L~~~tgd~~yaD~~Er~lyN~~la~~~~-d~~~~~Y~~pl~~~~~~~~~~~~~~~~~~~~CC~~n~~r~~~~~~~  387 (520)
T PF07944_consen  309 KLARRLFRLTGDARYADYYERALYNALLAGQSP-DGGSFFYFNPLNSGPYKHRWKNYRTPWFSFWCCPGNGARGWAKLPD  387 (520)
T ss_pred             HHHHHHHhcCCCchHHHHHHHHHhcccccccCC-CCCeeEEecCCccCcCccccccccCCCCCCCCCcchHHHHHHHHhh
Confidence            999999999999999999999999999999997 8999999999988775531135677889999999999999999999


Q ss_pred             ceEEeecCCCCeEEEEEeeCcEEEeeeCc--eEEEEEeCCCCCCCCCeEEEEEEeeCCCCeeeEEEEeecCCCCCCCcEE
Q 044240          493 SIYFEEKGKIPGLYIIQYISSSFDWKSGQ--IVLNQKVDPVVSSDPYLRITLTFSPKGAGKASTLNLRIPSWSNSNGAKA  570 (859)
Q Consensus       493 ~iY~~~~~~~~~LyVnLYipStl~~~~~g--v~I~q~t~~pyp~~~~~~V~ltv~~~~~~~~ftL~LRIP~Wa~~~~~~v  570 (859)
                      +||++++   ++||||||+||+++|+.+|  |+|+|+|+  |||++  +|+|+|++. ++.+|+|+||||+|++  +++|
T Consensus       388 ~iy~~~~---~~l~v~ly~~s~~~~~~~~~~v~i~q~T~--yP~~~--~v~i~v~~~-~~~~f~l~lRIP~Wa~--~~~i  457 (520)
T PF07944_consen  388 YIYFRDD---DGLYVNLYIPSELTWPVGGGTVTITQETD--YPFEG--TVRITVSPD-KPVPFTLRLRIPSWAK--GATI  457 (520)
T ss_pred             hheEecC---CEEEEEEEcceEEEEEECCcEEEEEEecC--CCCCC--CEEEEEEcC-CCccEEEEEEccCCCC--CcEE
Confidence            9999985   7999999999999999988  88889888  88999  899999775 5889999999999998  7999


Q ss_pred             EECCee-cccCCCCCEEEEEeecCCCCEEEEEecceeEEEeccCCccccCCeEEEeecceeee
Q 044240          571 MLNGQS-LALPSPGNSLSVTKTWSSDDKLTIHLPLSLWTEAIKDDRPKYASLQAILYGPYLLA  632 (859)
Q Consensus       571 ~VNG~~-~~~~~~ggY~~I~R~W~~GD~I~L~LPm~lr~~~~~d~~~~~~~~vAv~rGPlVlA  632 (859)
                      +|||++ .....++||++|+|+|++||+|+|+|||++|++++....+..++.+||+|||||||
T Consensus       458 ~vNG~~~~~~~~~~gy~~i~r~W~~gD~v~l~lpm~~r~~~~~~~~~~~~~~vAv~rGPlV~a  520 (520)
T PF07944_consen  458 RVNGEPVVDTAVPGGYLTIEREWKDGDVVELRLPMEVRLEPANPRVPDDPGRVAVMRGPLVYA  520 (520)
T ss_pred             EECCEeCCCCcCCCCeEEEEeeccCCcEEEEEecCeeEEEeCCCCCccCCCeEEEEeCchhcC
Confidence            999999 55567999999999999999999999999999998433444478999999999998

One member of this family is annotated as a possible arabinosidase, but no references were found to back this.
>COG3533 Uncharacterized protein conserved in bacteria [Function unknown] Back     alignment and domain information
>PF05270 AbfB: Alpha-L-arabinofuranosidase B (ABFB); InterPro: IPR007934 This family consists of several fungal alpha-L-arabinofuranosidase B proteins Back     alignment and domain information
>PF05270 AbfB: Alpha-L-arabinofuranosidase B (ABFB); InterPro: IPR007934 This family consists of several fungal alpha-L-arabinofuranosidase B proteins Back     alignment and domain information
>cd00249 AGE AGE domain; N-acyl-D-glucosamine 2-epimerase domain; Responsible for intermediate epimerization during biosynthesis of N-acetylneuraminic acid Back     alignment and domain information
>cd00249 AGE AGE domain; N-acyl-D-glucosamine 2-epimerase domain; Responsible for intermediate epimerization during biosynthesis of N-acetylneuraminic acid Back     alignment and domain information
>PF03663 Glyco_hydro_76: Glycosyl hydrolase family 76 ; InterPro: IPR005198 O-Glycosyl hydrolases 3 Back     alignment and domain information
>PF07944 DUF1680: Putative glycosyl hydrolase of unknown function (DUF1680); InterPro: IPR012878 The members of this family are sequences derived from hypothetical bacterial and eukaryotic proteins of unknown function Back     alignment and domain information
>PF03663 Glyco_hydro_76: Glycosyl hydrolase family 76 ; InterPro: IPR005198 O-Glycosyl hydrolases 3 Back     alignment and domain information
>COG1331 Highly conserved protein containing a thioredoxin domain [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>cd04791 LanC_SerThrkinase Lanthionine synthetase C-like domain associated with serine threonine kinases Back     alignment and domain information
>PF07470 Glyco_hydro_88: Glycosyl Hydrolase Family 88; InterPro: IPR010905 Unsaturated glucuronyl hydrolase catalyses the hydrolytic release of unsaturated glucuronic acids from oligosaccharides produced by the reactions of polysaccharide lyases [] Back     alignment and domain information
>cd04791 LanC_SerThrkinase Lanthionine synthetase C-like domain associated with serine threonine kinases Back     alignment and domain information
>COG3533 Uncharacterized protein conserved in bacteria [Function unknown] Back     alignment and domain information
>PTZ00470 glycoside hydrolase family 47 protein; Provisional Back     alignment and domain information
>COG1331 Highly conserved protein containing a thioredoxin domain [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PF07221 GlcNAc_2-epim: N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase); InterPro: IPR010819 N-acylglucosamine 2-epimerase (AGE, 5 Back     alignment and domain information
>cd04792 LanM-like LanM-like proteins Back     alignment and domain information
>cd04434 LanC_like LanC-like proteins Back     alignment and domain information
>PF07221 GlcNAc_2-epim: N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase); InterPro: IPR010819 N-acylglucosamine 2-epimerase (AGE, 5 Back     alignment and domain information
>PF07470 Glyco_hydro_88: Glycosyl Hydrolase Family 88; InterPro: IPR010905 Unsaturated glucuronyl hydrolase catalyses the hydrolytic release of unsaturated glucuronic acids from oligosaccharides produced by the reactions of polysaccharide lyases [] Back     alignment and domain information
>cd04794 euk_LANCL eukaryotic Lanthionine synthetase C-like protein Back     alignment and domain information
>COG4403 LcnDR2 Lantibiotic modifying enzyme [Defense mechanisms] Back     alignment and domain information
>COG4225 Predicted unsaturated glucuronyl hydrolase involved in regulation of bacterial surface properties, and related proteins [General function prediction only] Back     alignment and domain information
>PF01532 Glyco_hydro_47: Glycosyl hydrolase family 47; InterPro: IPR001382 O-Glycosyl hydrolases 3 Back     alignment and domain information
>cd04792 LanM-like LanM-like proteins Back     alignment and domain information
>cd04434 LanC_like LanC-like proteins Back     alignment and domain information
>PF06662 C5-epim_C: D-glucuronyl C5-epimerase C-terminus; InterPro: IPR010598 This entry consists of known or predicted D-glucuronyl C5-epimerases which share a common C-terminal region Back     alignment and domain information
>PF00759 Glyco_hydro_9: Glycosyl hydrolase family 9; InterPro: IPR001701 O-Glycosyl hydrolases 3 Back     alignment and domain information
>cd04793 LanC LanC is the cyclase enzyme of the lanthionine synthetase Back     alignment and domain information
>PF01532 Glyco_hydro_47: Glycosyl hydrolase family 47; InterPro: IPR001382 O-Glycosyl hydrolases 3 Back     alignment and domain information
>PTZ00470 glycoside hydrolase family 47 protein; Provisional Back     alignment and domain information
>COG2942 N-acyl-D-glucosamine 2-epimerase [Carbohydrate transport and metabolism] Back     alignment and domain information
>PF06662 C5-epim_C: D-glucuronyl C5-epimerase C-terminus; InterPro: IPR010598 This entry consists of known or predicted D-glucuronyl C5-epimerases which share a common C-terminal region Back     alignment and domain information
>COG4225 Predicted unsaturated glucuronyl hydrolase involved in regulation of bacterial surface properties, and related proteins [General function prediction only] Back     alignment and domain information
>COG2942 N-acyl-D-glucosamine 2-epimerase [Carbohydrate transport and metabolism] Back     alignment and domain information
>cd04794 euk_LANCL eukaryotic Lanthionine synthetase C-like protein Back     alignment and domain information
>KOG2244 consensus Highly conserved protein containing a thioredoxin domain [General function prediction only] Back     alignment and domain information
>PLN02345 endoglucanase Back     alignment and domain information
>KOG2787 consensus Lanthionine synthetase C-like protein 1 [Defense mechanisms] Back     alignment and domain information
>PLN02909 Endoglucanase Back     alignment and domain information
>cd04793 LanC LanC is the cyclase enzyme of the lanthionine synthetase Back     alignment and domain information
>PF05147 LANC_like: Lanthionine synthetase C-like protein; InterPro: IPR007822 The LanC-like protein superfamily encompasses a highly divergent group of peptide-modifying enzymes, including the eukaryotic and bacterial lanthionine synthetase C-like proteins (LanC) [, , ]; subtilin biosynthesis protein SpaC from Bacillus subtilis [, ]; epidermin biosynthesis protein EpiC from Staphylococcus epidermidis []; nisin biosynthesis protein NisC from Lactococcus lactis [, , ]; GCR2 from Arabidopsis thaliana []; and many others Back     alignment and domain information
>KOG2429 consensus Glycosyl hydrolase, family 47 [Carbohydrate transport and metabolism] Back     alignment and domain information
>KOG2244 consensus Highly conserved protein containing a thioredoxin domain [General function prediction only] Back     alignment and domain information
>KOG2787 consensus Lanthionine synthetase C-like protein 1 [Defense mechanisms] Back     alignment and domain information
>PF06917 Pectate_lyase_2: Periplasmic pectate lyase; InterPro: IPR010702 This family consists of several Enterobacterial periplasmic pectate lyase proteins Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query859
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 3e-08
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 1e-06
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 7e-06
3kmv_A157 Alpha-L-arabinofuranosidase B; protein:carboydrate 8e-04
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
 Score = 56.8 bits (136), Expect = 3e-08
 Identities = 105/664 (15%), Positives = 186/664 (28%), Gaps = 194/664 (29%)

Query: 32  HQLRYHLLTSKNE---TWKQEVLNHYHLTPSDDSAWSSL--LPRKILREEEDDEFSWAMM 86
           H   +H+     E    +K ++L+ +     D+     +  +P+ IL +EE D       
Sbjct: 1   HHHHHHMDFETGEHQYQYK-DILSVFEDAFVDNFDCKDVQDMPKSILSKEEIDHII---- 55

Query: 87  YRKMKNPGE-----FKIPEDK-------FLEDVSLHDVRLGKDSMHWRAQQTNLEYLLML 134
               K+        F     K       F+E+V   + +     +    +Q ++   + +
Sbjct: 56  --MSKDAVSGTLRLFWTLLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYI 113

Query: 135 D-VDRL---VWSFRKTAGLRTKGNAYGGWEDPTSQLRGHFVGHYLSASALMWASTHNDTL 190
           +  DRL      F K    R           P  +LR           AL+      + L
Sbjct: 114 EQRDRLYNDNQVFAKYNVSR---------LQPYLKLR----------QALLELRPAKNVL 154

Query: 191 KEKMSAV---VSALSHCQKKIGSGYLSAFPSRYF--------DHLEALKPVWAPYYTIHK 239
            + +        AL  C              + F             L+ +    Y I  
Sbjct: 155 IDGVLGSGKTWVALDVCLSY---KVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDP 211

Query: 240 ILAGLLDQ-YKYADNAHALKMATR--MVEYFYNRVQKVIRKYSVARHWQYLNEEPGGMND 296
                 D         H+++   R  +    Y     V+     A+ W           +
Sbjct: 212 NWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQNAKAWNAF--------N 263

Query: 297 VLYRLFSITKD-----------PRHLFLAHL---FAKPCFLGLLA-VQSNDISDF--HVN 339
           +  ++   T+              H+ L H            LL         D    V 
Sbjct: 264 LSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVL 323

Query: 340 THIPLVIGTQRRYELTGELLHKEMGTFFMDLVNSSHTYATGGTSVGEFWRDP--KRLATT 397
           T  P  +       +  E +   + T+                   + W+     +L T 
Sbjct: 324 TTNPRRLS------IIAESIRDGLATW-------------------DNWKHVNCDKLTTI 358

Query: 398 LGTNNEESCTTYNMLKVS--RNLFRWTKESAYADFYERALI-NGVLSI--QRGTSPGVMI 452
           +     ES    N+L+ +  R +F        + F   A I   +LS+         VM+
Sbjct: 359 I-----ESS--LNVLEPAEYRKMFD-----RLSVFPPSAHIPTILLSLIWFDVIKSDVMV 406

Query: 453 YMLPLGPGSSKQTDNGWGTPFDSFWCCYGTGIESFSKLGDSIYFEEKGKIPGLY-----I 507
            +  L   S  +                    ES   +   IY E K K+   Y     I
Sbjct: 407 VVNKLHKYSLVEKQPK----------------ESTISIPS-IYLELKVKLENEYALHRSI 449

Query: 508 I-QY-ISSSFDWKSGQIVLNQKVDPVVSSDPYLRITLTFSPKGAGKAST--------LNL 557
           +  Y I  +FD        +  + P +  D Y    +    K               L+ 
Sbjct: 450 VDHYNIPKTFDS-------DDLIPPYL--DQYFYSHIGHHLKNIEHPERMTLFRMVFLDF 500

Query: 558 RIPSWSNSNGAKAMLNGQSLALPSPGNSLSVTKTWSSDDKLTIHLPLSLWTEAIKDDRPK 617
           R   +      +  +   S A  + G+ L+  +             L  +   I D+ PK
Sbjct: 501 R---F-----LEQKIRHDSTAWNASGSILNTLQQ------------LKFYKPYICDNDPK 540

Query: 618 YASL 621
           Y  L
Sbjct: 541 YERL 544
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>3kmv_A Alpha-L-arabinofuranosidase B; protein:carboydrate interactions, carbohydrate-binding modul trefoil fold, CBM42, sugar binding protein; 1.80A {Clostridium thermocellum} Length = 157 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query859
3kmv_A157 Alpha-L-arabinofuranosidase B; protein:carboydrate 99.84
1wd3_A482 Alpha-L-arabinofuranosidase B; beta-sandwich, beta 99.82
3kmv_A157 Alpha-L-arabinofuranosidase B; protein:carboydrate 99.7
3akh_A468 Putative secreted alpha L-arabinofuranosidase II; 99.34
1wd3_A482 Alpha-L-arabinofuranosidase B; beta-sandwich, beta 99.2
3akh_A468 Putative secreted alpha L-arabinofuranosidase II; 99.13
2gz6_A388 N-acetyl-D-glucosamine 2-epimerase; anabaena SP. C 98.74
2zzr_A397 Unsaturated glucuronyl hydrolase; alpha barrel; 1. 98.72
2ahf_A377 Unsaturated glucuronyl hydrolase; alpha6/alpha6 ba 98.71
3gt5_A402 N-acetylglucosamine 2-epimerase; structural genomi 98.65
3k7x_A349 LIN0763 protein; Q92DQ0, LKR23, NESG, structural g 98.57
3pmm_A382 Putative cytoplasmic protein; structural genomics, 98.44
3k7x_A349 LIN0763 protein; Q92DQ0, LKR23, NESG, structural g 98.4
2zbl_A421 Putative isomerase; N-acyl-D-glucosamine 2-epimera 98.32
1nc5_A373 Hypothetical protein YTER; structural genomics, he 98.31
2gz6_A388 N-acetyl-D-glucosamine 2-epimerase; anabaena SP. C 98.17
1fp3_A402 N-acyl-D-glucosamine 2-epimerase; alpha/alpha-barr 98.17
3gt5_A402 N-acetylglucosamine 2-epimerase; structural genomi 97.99
3k11_A445 Putative glycosyl hydrolase; structural genomics, 97.99
2ahf_A377 Unsaturated glucuronyl hydrolase; alpha6/alpha6 ba 97.86
3pmm_A382 Putative cytoplasmic protein; structural genomics, 97.7
1nc5_A373 Hypothetical protein YTER; structural genomics, he 97.62
2zzr_A397 Unsaturated glucuronyl hydrolase; alpha barrel; 1. 97.53
2zbl_A421 Putative isomerase; N-acyl-D-glucosamine 2-epimera 97.23
1fp3_A402 N-acyl-D-glucosamine 2-epimerase; alpha/alpha-barr 97.17
3h7l_A586 Endoglucanase; dehydrogenase, PSI-2, NYSGXRC, stru 96.9
3k11_A445 Putative glycosyl hydrolase; structural genomics, 96.37
3e6u_A411 LANC-like protein 1; alpha barrel, cytoplasm, sign 95.92
1nxc_A478 Mannosyl-oligosaccharide 1,2-alpha-mannosidase IA; 95.5
1dl2_A511 Class I alpha-1,2-mannosidase; alpha-alpha helix b 94.41
1ks8_A433 Endo-B-1,4-glucanase; cellulase, endoglucanase, te 94.11
3e6u_A411 LANC-like protein 1; alpha barrel, cytoplasm, sign 94.0
1x9d_A538 Endoplasmic reticulum mannosyl-oligosaccharide 1, 93.33
1nxc_A478 Mannosyl-oligosaccharide 1,2-alpha-mannosidase IA; 93.24
1g87_A614 Endocellulase 9G; endoglucanase, cellulose binding 92.41
2xfg_A466 Endoglucanase 1; hydrolase-sugar binding protein c 92.17
1ia6_A441 Cellulase CEL9M; cellullase, alpha barrel, hydrola 92.01
3gzk_A537 Cellulase; fold from GH9 from CAZY database, glyco 91.72
1tf4_A605 T. fusca endo/EXO-cellulase E4 catalytic domain an 91.57
2ri9_A475 Mannosyl-oligosaccharide alpha-1,2-mannosidase; al 91.32
1x9d_A538 Endoplasmic reticulum mannosyl-oligosaccharide 1, 91.21
2g0d_A409 Nisin biosynthesis protein NISC; alpha toroid, alp 91.01
1hcu_A503 Alpha-1,2-mannosidase; glycosylation, glycosyl hyd 90.94
2ri9_A475 Mannosyl-oligosaccharide alpha-1,2-mannosidase; al 90.64
1ut9_A609 Cellulose 1,4-beta-cellobiosidase; hydrolase, glyc 89.86
1dl2_A511 Class I alpha-1,2-mannosidase; alpha-alpha helix b 89.29
1hcu_A503 Alpha-1,2-mannosidase; glycosylation, glycosyl hyd 88.87
2g0d_A409 Nisin biosynthesis protein NISC; alpha toroid, alp 82.03
2v8i_A543 Pectate lyase; periplasm, beta-elimination, pectin 80.9
>3kmv_A Alpha-L-arabinofuranosidase B; protein:carboydrate interactions, carbohydrate-binding modul trefoil fold, CBM42, sugar binding protein; 1.80A {Clostridium thermocellum} Back     alignment and structure
Probab=99.84  E-value=2.6e-21  Score=190.06  Aligned_cols=112  Identities=20%  Similarity=0.295  Sum_probs=102.2

Q ss_pred             CceeeecCCCCCCceeecCCCceeEEEecCCCCCCCceEEEeecCCCCC-CeEEEeecCCcceEEEEeecCceEEEEeec
Q 044240          724 GKSVMLEPFSHPGMLVAPKGKHHELVVTNSSRAEGSSVFRLVSGLDGKD-NTVSLESKSHKGCYVYSLKSGKSMTLRCHK  802 (859)
Q Consensus       724 g~~v~l~p~~~p~~~v~~~~~~~~l~v~~~~~~~~~s~f~~vpgl~g~~-~~vsles~~~pg~~~~~~~~g~~~~l~~~~  802 (859)
                      ++.|+|+++++|++||||+|..++|  +.++...+|++|++||||++.+ |+|||||+++||+|||+  .|..|+|++  
T Consensus         8 ~~~vsl~S~n~p~~ylRh~~~~~~~--~~~~~~~~datF~vvpGLa~~~~g~VSfES~n~Pg~yLRh--~~~~l~L~~--   81 (157)
T 3kmv_A            8 ITKAKFQSYNYPNMYIRHANFDARI--DENVTPEMDSQWELVPGLANSGDGYVSIQSVNYPGYYLRH--SNYDLSLEK--   81 (157)
T ss_dssp             --CBEEEESSSTTCEEEEETTEEEE--ESSCSSGGGGCEEEEECSSCCSTTEEEEEESSSTTEEEEE--ETTEEEEEE--
T ss_pred             CccEEEEecCCCCcEEEEeCCeEEE--ccCCCCccCceEEEeCCcCCCCCCEEEEEECCCCCcEEEE--eCCEEEEec--
Confidence            5589999999999999999888776  6667778999999999998865 89999999999999999  899999997  


Q ss_pred             CCCCcccccccccccccCCCcCCCceEEEecCCCceecc
Q 044240          803 KSKKPKFNHAVSFVMEKGKSKYHPISFVAKGTNRNYLLE  841 (859)
Q Consensus       803 ~~~~~~f~~~asF~~~~gl~~~~~~sf~a~g~~~~~ll~  841 (859)
                      +++++.|+++|+|..++||++..++||++...++.||..
T Consensus        82 ~~~s~~f~~dATF~~~~GLa~~~~vSfeS~n~Pg~yLrh  120 (157)
T 3kmv_A           82 NDGTSLFAESATFKIVPGLADPSYISFQSYNFPTRYIRH  120 (157)
T ss_dssp             CCSCHHHHHTTCEEEEECSSCTTSEEEEESSSTTEEEEE
T ss_pred             cCCCCCccCCceEEEccCccCCCcEEEEEEcCCCeEEEE
Confidence            688889999999999999999999999999999999976
>1wd3_A Alpha-L-arabinofuranosidase B; beta-sandwich, beta-trefoil, hydrolase; HET: NAG; 1.75A {Aspergillus kawachii} SCOP: b.29.1.21 b.42.8.1 PDB: 1wd4_A* 2d44_A* 2d43_A* Back     alignment and structure
>3kmv_A Alpha-L-arabinofuranosidase B; protein:carboydrate interactions, carbohydrate-binding modul trefoil fold, CBM42, sugar binding protein; 1.80A {Clostridium thermocellum} Back     alignment and structure
>3akh_A Putative secreted alpha L-arabinofuranosidase II; five-bladed beta propeller, beta-trefoil, hydrolase; HET: AHR; 1.70A {Streptomyces avermitilis} PDB: 3akf_A* 3akg_A* 3aki_A* Back     alignment and structure
>1wd3_A Alpha-L-arabinofuranosidase B; beta-sandwich, beta-trefoil, hydrolase; HET: NAG; 1.75A {Aspergillus kawachii} SCOP: b.29.1.21 b.42.8.1 PDB: 1wd4_A* 2d44_A* 2d43_A* Back     alignment and structure
>3akh_A Putative secreted alpha L-arabinofuranosidase II; five-bladed beta propeller, beta-trefoil, hydrolase; HET: AHR; 1.70A {Streptomyces avermitilis} PDB: 3akf_A* 3akg_A* 3aki_A* Back     alignment and structure
>2gz6_A N-acetyl-D-glucosamine 2-epimerase; anabaena SP. CH1, isomer; 2.00A {Anabaena SP} Back     alignment and structure
>2zzr_A Unsaturated glucuronyl hydrolase; alpha barrel; 1.75A {Streptococcus agalactiae} PDB: 3anj_A 3ank_A* 3ani_A* Back     alignment and structure
>2ahf_A Unsaturated glucuronyl hydrolase; alpha6/alpha6 barrel, glycoside hydrolase family 88; 1.52A {Bacillus SP} PDB: 2ahg_A* 2fv0_A* 2fv1_A* 2d5j_A 1vd5_A 2fuz_A Back     alignment and structure
>3gt5_A N-acetylglucosamine 2-epimerase; structural genomics, isomerase, PSI-2; 1.70A {Xylella fastidiosa} Back     alignment and structure
>3k7x_A LIN0763 protein; Q92DQ0, LKR23, NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 1.89A {Listeria innocua} Back     alignment and structure
>3pmm_A Putative cytoplasmic protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics; 1.90A {Klebsiella pneumoniae subsp} PDB: 3qwt_A Back     alignment and structure
>3k7x_A LIN0763 protein; Q92DQ0, LKR23, NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 1.89A {Listeria innocua} Back     alignment and structure
>2zbl_A Putative isomerase; N-acyl-D-glucosamine 2-epimerase protein family; HET: BMA; 1.60A {Salmonella typhimurium} PDB: 2afa_A 2rgk_A* Back     alignment and structure
>1nc5_A Hypothetical protein YTER; structural genomics, helix barrel, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.60A {Bacillus subtilis} SCOP: a.102.1.6 PDB: 2d8l_A* 2gh4_A* Back     alignment and structure
>2gz6_A N-acetyl-D-glucosamine 2-epimerase; anabaena SP. CH1, isomer; 2.00A {Anabaena SP} Back     alignment and structure
>1fp3_A N-acyl-D-glucosamine 2-epimerase; alpha/alpha-barrel, isomer; 2.00A {Sus scrofa} SCOP: a.102.1.3 Back     alignment and structure
>3gt5_A N-acetylglucosamine 2-epimerase; structural genomics, isomerase, PSI-2; 1.70A {Xylella fastidiosa} Back     alignment and structure
>3k11_A Putative glycosyl hydrolase; structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; HET: MSE MES; 1.80A {Bacteroides thetaiotaomicron vpi-5482} Back     alignment and structure
>2ahf_A Unsaturated glucuronyl hydrolase; alpha6/alpha6 barrel, glycoside hydrolase family 88; 1.52A {Bacillus SP} PDB: 2ahg_A* 2fv0_A* 2fv1_A* 2d5j_A 1vd5_A 2fuz_A Back     alignment and structure
>3pmm_A Putative cytoplasmic protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics; 1.90A {Klebsiella pneumoniae subsp} PDB: 3qwt_A Back     alignment and structure
>1nc5_A Hypothetical protein YTER; structural genomics, helix barrel, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.60A {Bacillus subtilis} SCOP: a.102.1.6 PDB: 2d8l_A* 2gh4_A* Back     alignment and structure
>2zzr_A Unsaturated glucuronyl hydrolase; alpha barrel; 1.75A {Streptococcus agalactiae} PDB: 3anj_A 3ank_A* 3ani_A* Back     alignment and structure
>2zbl_A Putative isomerase; N-acyl-D-glucosamine 2-epimerase protein family; HET: BMA; 1.60A {Salmonella typhimurium} PDB: 2afa_A 2rgk_A* Back     alignment and structure
>1fp3_A N-acyl-D-glucosamine 2-epimerase; alpha/alpha-barrel, isomer; 2.00A {Sus scrofa} SCOP: a.102.1.3 Back     alignment and structure
>3h7l_A Endoglucanase; dehydrogenase, PSI-2, NYSGXRC, structural GEN protein structure initiative; 2.30A {Vibrio parahaemolyticus} Back     alignment and structure
>3k11_A Putative glycosyl hydrolase; structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; HET: MSE MES; 1.80A {Bacteroides thetaiotaomicron vpi-5482} Back     alignment and structure
>3e6u_A LANC-like protein 1; alpha barrel, cytoplasm, signaling protein; 2.60A {Homo sapiens} PDB: 3e73_A* Back     alignment and structure
>1nxc_A Mannosyl-oligosaccharide 1,2-alpha-mannosidase IA; glycosidase, structural genomics, PSI, protein initiative; HET: NAG BMA MAN; 1.51A {Mus musculus} SCOP: a.102.2.1 Back     alignment and structure
>1dl2_A Class I alpha-1,2-mannosidase; alpha-alpha helix barrel, hydrolase; HET: NAG NDG BMA MAN; 1.54A {Saccharomyces cerevisiae} SCOP: a.102.2.1 PDB: 1g6i_A* Back     alignment and structure
>1ks8_A Endo-B-1,4-glucanase; cellulase, endoglucanase, termite, glycosyl hydrolase, family 9, (alpha/alpha)6; 1.40A {Nasutitermes takasagoensis} SCOP: a.102.1.2 PDB: 1ksc_A 1ksd_A Back     alignment and structure
>3e6u_A LANC-like protein 1; alpha barrel, cytoplasm, signaling protein; 2.60A {Homo sapiens} PDB: 3e73_A* Back     alignment and structure
>1x9d_A Endoplasmic reticulum mannosyl-oligosaccharide 1, 2-alpha-mannosidase; substrate analogue, glycosyl hydrolase; HET: SMD; 1.41A {Homo sapiens} SCOP: a.102.2.1 PDB: 1fo3_A* 1fo2_A* 1fmi_A Back     alignment and structure
>1nxc_A Mannosyl-oligosaccharide 1,2-alpha-mannosidase IA; glycosidase, structural genomics, PSI, protein initiative; HET: NAG BMA MAN; 1.51A {Mus musculus} SCOP: a.102.2.1 Back     alignment and structure
>1g87_A Endocellulase 9G; endoglucanase, cellulose binding domain, (ALPH 6-helix barrel, beta barrel, hydrolase; 1.60A {Clostridium cellulolyticum} SCOP: a.102.1.2 b.2.2.2 PDB: 1ga2_A* 1k72_A* 1kfg_A* Back     alignment and structure
>2xfg_A Endoglucanase 1; hydrolase-sugar binding protein complex, family-9 glycoside hydrolase, hydrolase, sugar binding protein; 1.68A {Clostridium thermocellum} Back     alignment and structure
>1ia6_A Cellulase CEL9M; cellullase, alpha barrel, hydrolase; 1.80A {Clostridium cellulolyticum} SCOP: a.102.1.2 PDB: 1ia7_A* Back     alignment and structure
>3gzk_A Cellulase; fold from GH9 from CAZY database, glycosidase, hydrolase; 1.80A {Alicyclobacillus acidocaldarius subsp} PDB: 3ez8_A 3h2w_A* 3h3k_A* 3rx5_A* 3rx7_A* 3rx8_A* Back     alignment and structure
>1tf4_A T. fusca endo/EXO-cellulase E4 catalytic domain and cellulose-binding domain; glycosyl hydrolase, cellulose degradation; 1.90A {Thermobifida fusca} SCOP: a.102.1.2 b.2.2.2 PDB: 1js4_A 3tf4_A* 4tf4_A* Back     alignment and structure
>2ri9_A Mannosyl-oligosaccharide alpha-1,2-mannosidase; alternative conformations, modulation of activity, glycoprot glycosidase, hydrolase; HET: NAG NDG MAN MMA; 1.95A {Penicillium citrinum} SCOP: a.102.2.1 PDB: 2ri8_A* 1kkt_A* 1kre_A* 1krf_A* Back     alignment and structure
>1x9d_A Endoplasmic reticulum mannosyl-oligosaccharide 1, 2-alpha-mannosidase; substrate analogue, glycosyl hydrolase; HET: SMD; 1.41A {Homo sapiens} SCOP: a.102.2.1 PDB: 1fo3_A* 1fo2_A* 1fmi_A Back     alignment and structure
>2g0d_A Nisin biosynthesis protein NISC; alpha toroid, alpha barrel, biosynthetic protein; 2.21A {Lactococcus lactis subsp} SCOP: a.102.6.1 PDB: 2g02_A Back     alignment and structure
>1hcu_A Alpha-1,2-mannosidase; glycosylation, glycosyl hydrolase; HET: NAG; 2.37A {Trichoderma reesei} SCOP: a.102.2.1 Back     alignment and structure
>2ri9_A Mannosyl-oligosaccharide alpha-1,2-mannosidase; alternative conformations, modulation of activity, glycoprot glycosidase, hydrolase; HET: NAG NDG MAN MMA; 1.95A {Penicillium citrinum} SCOP: a.102.2.1 PDB: 2ri8_A* 1kkt_A* 1kre_A* 1krf_A* Back     alignment and structure
>1ut9_A Cellulose 1,4-beta-cellobiosidase; hydrolase, glycoside hydrolase, family 9, cellobiohydrolase; 2.1A {Clostridium thermocellum} SCOP: a.102.1.2 b.1.18.2 PDB: 1rq5_A* Back     alignment and structure
>1dl2_A Class I alpha-1,2-mannosidase; alpha-alpha helix barrel, hydrolase; HET: NAG NDG BMA MAN; 1.54A {Saccharomyces cerevisiae} SCOP: a.102.2.1 PDB: 1g6i_A* Back     alignment and structure
>1hcu_A Alpha-1,2-mannosidase; glycosylation, glycosyl hydrolase; HET: NAG; 2.37A {Trichoderma reesei} SCOP: a.102.2.1 Back     alignment and structure
>2g0d_A Nisin biosynthesis protein NISC; alpha toroid, alpha barrel, biosynthetic protein; 2.21A {Lactococcus lactis subsp} SCOP: a.102.6.1 PDB: 2g02_A Back     alignment and structure
>2v8i_A Pectate lyase; periplasm, beta-elimination, pectin degradation; 1.50A {Yersinia enterocolitica} PDB: 2v8k_A* 2v8j_A Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query859
d1wd3a2162 Alpha-L-arabinofuranosidase B (AbfB), C-terminal d 99.68
d1wd3a2162 Alpha-L-arabinofuranosidase B (AbfB), C-terminal d 99.31
d2d5ja1377 Unsaturated glucuronyl hydrolase {Bacillus sp. GL1 98.59
d1nc5a_363 Hypothetical protein YteR {Bacillus subtilis [TaxI 98.28
d2afaa1411 Putative NAG isomerase YihS {Salmonella typhimuriu 97.76
d1nc5a_363 Hypothetical protein YteR {Bacillus subtilis [TaxI 97.75
d1fp3a_402 N-acyl-D-glucosamine 2-epimerase {Pig (Sus scrofa) 97.41
d2afaa1411 Putative NAG isomerase YihS {Salmonella typhimuriu 97.12
d2d5ja1377 Unsaturated glucuronyl hydrolase {Bacillus sp. GL1 97.07
d1ks8a_433 Endo-b-1,4-glucanase {Termite (Nasutitermes takasa 96.44
d1ia6a_431 Nonprocessive cellulase Cel9M {Clostridium cellulo 96.23
d1tf4a1460 Endo/exocellulase:cellobiose E-4, N-terminal domai 95.57
d1fp3a_402 N-acyl-D-glucosamine 2-epimerase {Pig (Sus scrofa) 95.56
d1nxca_467 Class I alpha-1;2-mannosidase, catalytic domain {M 95.51
d1ut9a1511 Cellulose 1,4-beta-cellobiosidase CbhA {Clostridiu 95.46
d1g87a1454 Endo/exocellulase:cellobiose E-4, N-terminal domai 95.33
d1dl2a_511 Class I alpha-1;2-mannosidase, catalytic domain {B 95.11
d1x9da1453 Class I alpha-1;2-mannosidase, catalytic domain {H 94.06
d1clca1441 CelD cellulase, C-terminal domain {Clostridium the 93.91
d1hcua_488 Class I alpha-1;2-mannosidase, catalytic domain {T 93.86
d1nxca_467 Class I alpha-1;2-mannosidase, catalytic domain {M 92.66
d1x9da1453 Class I alpha-1;2-mannosidase, catalytic domain {H 91.89
d2ri9a1475 Class I alpha-1;2-mannosidase, catalytic domain {F 89.44
d1dl2a_511 Class I alpha-1;2-mannosidase, catalytic domain {B 87.26
d1hcua_488 Class I alpha-1;2-mannosidase, catalytic domain {T 85.38
>d1wd3a2 b.42.8.1 (A:338-499) Alpha-L-arabinofuranosidase B (AbfB), C-terminal domain {Aspergillus kawachii [TaxId: 40384]} Back     information, alignment and structure
class: All beta proteins
fold: beta-Trefoil
superfamily: AbfB domain
family: AbfB domain
domain: Alpha-L-arabinofuranosidase B (AbfB), C-terminal domain
species: Aspergillus kawachii [TaxId: 40384]

Probab=99.68  E-value=3.9e-17  Score=158.33  Aligned_cols=117  Identities=14%  Similarity=0.170  Sum_probs=99.5

Q ss_pred             ccCCCce--eeecCCCCCCceeecCCCceeEEEecCCCC---CCCceEEEeecCCCCCCeEEEeecCCcceEEEEeecCc
Q 044240          720 RDFIGKS--VMLEPFSHPGMLVAPKGKHHELVVTNSSRA---EGSSVFRLVSGLDGKDNTVSLESKSHKGCYVYSLKSGK  794 (859)
Q Consensus       720 ~~~~g~~--v~l~p~~~p~~~v~~~~~~~~l~v~~~~~~---~~~s~f~~vpgl~g~~~~vsles~~~pg~~~~~~~~g~  794 (859)
                      +-..|++  ++++..++|++||||++...+|.+....++   ..|++|+|||||++ +|+|||||+++||.||||  .+.
T Consensus         6 ~l~~G~~~slr~~s~~y~~rylrH~~~~~~l~~v~~~s~~~~k~dasf~v~~Gl~~-~~~vSfES~n~Pg~yLRH--~n~   82 (162)
T d1wd3a2           6 SFTSGEVVSLRVTTPGYTTRYIAHTDTTVNTQVVDDDSSTTLKEEASWTVVTGLAN-SQCFSFESVDTPGSYIRH--YNF   82 (162)
T ss_dssp             CCCTTCEEEEEECSTTCTTEEEEEETTEEEEEECCTTSCHHHHHHTCEEEEECSSC-TTSEEEEESSSTTEEEEE--ETT
T ss_pred             ccccCceEEEEEeCCCCCceEEEEcCCcEEEEeccCCcchhhcccceEEEccCcCC-CCeEEEEEcCCCCcEEEE--ECC
Confidence            3345654  456899999999999988888876433332   46899999999998 799999999999999999  898


Q ss_pred             eEEEEeecCCCCcccccccccccccCCCcCCCceEEEecCCCceeccc
Q 044240          795 SMTLRCHKKSKKPKFNHAVSFVMEKGKSKYHPISFVAKGTNRNYLLEP  842 (859)
Q Consensus       795 ~~~l~~~~~~~~~~f~~~asF~~~~gl~~~~~~sf~a~g~~~~~ll~p  842 (859)
                      .|+|.  ++++++.|.++|||..++|| ....+||+...-+..||.+=
T Consensus        83 ~l~L~--~~d~s~~F~~DATF~~~~gl-~~~g~SfeS~n~p~~YlRH~  127 (162)
T d1wd3a2          83 ELLLN--ANDGTKQFHEDATFCPQAAL-NGEGTSLRSWSYPTRYFRHY  127 (162)
T ss_dssp             EEEEE--ECCCCHHHHHHTCEEEEECT-TSSSEEEEESSSTTCEEEEE
T ss_pred             EEEEe--cCCCccccccCceEEEeeCc-CCCceEEEEecCCCceEEee
Confidence            99998  58999999999999999999 55789999999999998653
>d1wd3a2 b.42.8.1 (A:338-499) Alpha-L-arabinofuranosidase B (AbfB), C-terminal domain {Aspergillus kawachii [TaxId: 40384]} Back     information, alignment and structure
>d2d5ja1 a.102.1.7 (A:1-377) Unsaturated glucuronyl hydrolase {Bacillus sp. GL1 [TaxId: 84635]} Back     information, alignment and structure
>d1nc5a_ a.102.1.6 (A:) Hypothetical protein YteR {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d2afaa1 a.102.1.3 (A:4-415) Putative NAG isomerase YihS {Salmonella typhimurium [TaxId: 90371]} Back     information, alignment and structure
>d1nc5a_ a.102.1.6 (A:) Hypothetical protein YteR {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1fp3a_ a.102.1.3 (A:) N-acyl-D-glucosamine 2-epimerase {Pig (Sus scrofa) [TaxId: 9823]} Back     information, alignment and structure
>d2afaa1 a.102.1.3 (A:4-415) Putative NAG isomerase YihS {Salmonella typhimurium [TaxId: 90371]} Back     information, alignment and structure
>d2d5ja1 a.102.1.7 (A:1-377) Unsaturated glucuronyl hydrolase {Bacillus sp. GL1 [TaxId: 84635]} Back     information, alignment and structure
>d1ks8a_ a.102.1.2 (A:) Endo-b-1,4-glucanase {Termite (Nasutitermes takasagoensis) [TaxId: 62960]} Back     information, alignment and structure
>d1ia6a_ a.102.1.2 (A:) Nonprocessive cellulase Cel9M {Clostridium cellulolyticum [TaxId: 1521]} Back     information, alignment and structure
>d1tf4a1 a.102.1.2 (A:1-460) Endo/exocellulase:cellobiose E-4, N-terminal domain {Thermomonospora fusca [TaxId: 2021]} Back     information, alignment and structure
>d1fp3a_ a.102.1.3 (A:) N-acyl-D-glucosamine 2-epimerase {Pig (Sus scrofa) [TaxId: 9823]} Back     information, alignment and structure
>d1nxca_ a.102.2.1 (A:) Class I alpha-1;2-mannosidase, catalytic domain {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1ut9a1 a.102.1.2 (A:306-816) Cellulose 1,4-beta-cellobiosidase CbhA {Clostridium thermocellum [TaxId: 1515]} Back     information, alignment and structure
>d1g87a1 a.102.1.2 (A:3-456) Endo/exocellulase:cellobiose E-4, N-terminal domain {Clostridium cellulolyticum, atcc 35319 [TaxId: 1521]} Back     information, alignment and structure
>d1dl2a_ a.102.2.1 (A:) Class I alpha-1;2-mannosidase, catalytic domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1x9da1 a.102.2.1 (A:245-697) Class I alpha-1;2-mannosidase, catalytic domain {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1clca1 a.102.1.2 (A:135-575) CelD cellulase, C-terminal domain {Clostridium thermocellum [TaxId: 1515]} Back     information, alignment and structure
>d1hcua_ a.102.2.1 (A:) Class I alpha-1;2-mannosidase, catalytic domain {Trichoderma reesei [TaxId: 51453]} Back     information, alignment and structure
>d1nxca_ a.102.2.1 (A:) Class I alpha-1;2-mannosidase, catalytic domain {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1x9da1 a.102.2.1 (A:245-697) Class I alpha-1;2-mannosidase, catalytic domain {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2ri9a1 a.102.2.1 (A:1036-1510) Class I alpha-1;2-mannosidase, catalytic domain {Fungus (Penicillium citrinum) [TaxId: 5077]} Back     information, alignment and structure
>d1dl2a_ a.102.2.1 (A:) Class I alpha-1;2-mannosidase, catalytic domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1hcua_ a.102.2.1 (A:) Class I alpha-1;2-mannosidase, catalytic domain {Trichoderma reesei [TaxId: 51453]} Back     information, alignment and structure