Citrus Sinensis ID: 044359

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-
FSGVYLVDFTCYHPADSLRVPFSHFVEHFTTSNVFDKESLDFQEKVLEKSGIGDESCIPLNLHEMQPDVSLKRSREETEEVLCTIVKDLLSKHKINPKSIDILVTNCSIFCPTPSISSMIINKFGFRSNIKSINLSGMGCSAGILSISLVKDLLKVHKNSLALVLSMEAISSNGYTGSTKSMLISNTVFRMGGAAILLSNRQQDKHIAKYKLKHLVRTHMGYDDQAYSSVFQQQDKDGNVGVSISRSLLPVAARALRINISQLGPHVLPYSEQLKYLWSVVCKKSKTYVPNFKKAFEHFCIHAGGRAIIDAVEENLKLSKEDGEASRMTLYRFGNTSSSSYWYELCYLEAKGKVKKGDRVWQIAFGSGFKVNSAVWKCVSNLDPKERNAWSDRIHLYPVDI
ccEEEEEEcccccccccccccHHHHHHHHHHcccccHHHHHHHHHHHHHcccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHcccccccccEEEEEcccccccccHHHHHHHHccccccccccccccccccHHHHHHHHHHHHHHHccccEEEEEEEEEccccccccccccHHHHHHccccccEEEEEEcccccHHHHHcccccEEEEcccccccccccccEEEEccccEEEEEccccHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHccccccHHccccEEEEccccHHHHHHHHHHcccccccHHHHHHHHHHccccccccHHHHHHHHHHccccccccEEEEEEEcccccEEEEEEEEEcccccccccccccccccccccc
cccEEEEEEEcccccccccccHHHHHHHHHHcccccHHHHHHHHHHHHHccccccccccHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHcccHcccEEEEEEcccccccccHHHHHHHHccccccHHEEEccccccHHHHHHHHHHHHHHHHccccEEEEEEEcccccccccccccccHHHHHHHHcccHEHEEcccccHHHHHHHHHHHHHHHcccccccccEEEEEcccccccccccccHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHcccccccHHHHHHHHHHccccHHHHHHHHHHccccHHHccHcHHHHHHcccccHHHHHHHHHHHHHccccccccEEEEEEEccccccccEEEEEccccccccccccHHHHccccccc
fsgvylvdftcyhpadslrvpfshfvehfttsnvfdkeSLDFQEKVLeksgigdesciplnlhemqpdvslkrsreETEEVLCTIVKDLLskhkinpksiDILVtncsifcptpsissmiinkfgfrsniksinlsgmgcsaGILSISLVKDLLKVHKNSLALVLSMEAissngytgstksmLISNTVFRMGGAAILLSNRQQDKHIAKYKLKHLVRthmgyddqaySSVFQqqdkdgnvgvsisRSLLPVAARALRINIsqlgphvlpyseQLKYLWSVVCkksktyvpNFKKAFEHFCIHAGGRAIIDAVEENLKLSKEDGEASRMTLYRFGNTSSSSYWYELCYLEAKgkvkkgdrvwQIAFGSGFKVNSAVWKcvsnldpkernawsdrihlypvdi
FSGVYLVDFTCYHPADSLRVPFSHFVEHFTTsnvfdkesLDFQEKVLEKSgigdesciplnlhemqpdvslkrsreeTEEVLCTIVKDLLSKHKINPKSIDILVTNCSIFCPTPSISSMIINKFGFRSNIKSINLSGMGCSAGILSISLVKDLLKVHKNSLALVLSMEAISSNGYTGSTKSMLISNTVFRMGGAAILLSNRQQDKHIAKYKLKHLVRTHMGYDDQAYSSVFQQQDKDGNVGVSISRSLLPVAARALRINISQLGPHVLPYSEQLKYLWSVVCKKSKTYVPNFKKAFEHFCIHAGGRAIIDAVEENLKLSKEDGEASRMTLYRFGNTSSSSYWYELCYLEAKGKVKKGDRVWQIAFgsgfkvnsaVWKCVsnldpkernawsdrihlypvdi
FSGVYLVDFTCYHPADSLRVPFSHFVEHFTTSNVFDKESLDFQEKVLEKSGIGDESCIPLNLHEMQPDVSLKRSREETEEVLCTIVKDLLSKHKINPKSIDILVTNCSIFCPTPSISSMIINKFGFRSNIKSINLSGMGCSAGILSISLVKDLLKVHKNSLALVLSMEAISSNGYTGSTKSMLISNTVFRMGGAAILLSNRQQDKHIAKYKLKHLVRTHMGYDDQAYSSVFQQQDKDGNVGVSISRSLLPVAARALRINISQLGPHVLPYSEQLKYLWSVVCKKSKTYVPNFKKAFEHFCIHAGGRAIIDAVEENLKLSKEDGEASRMTLYRFGNTSSSSYWYELCYLEAKGKVKKGDRVWQIAFGSGFKVNSAVWKCVSNLDPKERNAWSDRIHLYPVDI
***VYLVDFTCYHPADSLRVPFSHFVEHFTTSNVFDKESLDFQEKVLEKSGIGDESCIPLNL*****************EVLCTIVKDLLSKHKINPKSIDILVTNCSIFCPTPSISSMIINKFGFRSNIKSINLSGMGCSAGILSISLVKDLLKVHKNSLALVLSMEAISSNGYTGSTKSMLISNTVFRMGGAAILLSNRQQDKHIAKYKLKHLVRTHMGYDDQAYSSVFQQQDKDGNVGVSISRSLLPVAARALRINISQLGPHVLPYSEQLKYLWSVVCKKSKTYVPNFKKAFEHFCIHAGGRAIIDAVEENLK**********MTLYRFGNTSSSSYWYELCYLEAKGKVKKGDRVWQIAFGSGFKVNSAVWKCVSNLDPKERNAWSDRIHLY****
FSGVYLVDFTCYHPADSLRVPFSHFVEHFTTSNVFDKESLDFQEKVLEKSGIGDESCIPLNLHEMQPDVSLKRSREETEEVLCTIVKDLLSKHKINPKSIDILVTNCSIFCPTPSISSMIINKFGFRSNIKSINLSGMGCSAGILSISLVKDLLKVHKNSLALVLSMEAISSNGYTGSTKSMLISNTVFRMGGAAILLSNRQQDKHIAKYKLKHLVRTHMGYDDQAYSSVFQQQDKDGNVGVSISRSLLPVAARALRINISQLGPHVLPYSEQLKYLWSVVCKKSKTYVPNFKKAFEHFCIHAGGRAIIDAVEENLKLSKEDGEASRMTLYRFGNTSSSSYWYELCYLEA****KKGDRVWQIAFGSGFKVNSAVWKCVSNLDPKERNAWSDRIHLYPVD*
FSGVYLVDFTCYHPADSLRVPFSHFVEHFTTSNVFDKESLDFQEKVLEKSGIGDESCIPLNLHEMQPD**********EEVLCTIVKDLLSKHKINPKSIDILVTNCSIFCPTPSISSMIINKFGFRSNIKSINLSGMGCSAGILSISLVKDLLKVHKNSLALVLSMEAISSNGYTGSTKSMLISNTVFRMGGAAILLSNRQQDKHIAKYKLKHLVRTHMGYDDQAYSSVFQQQDKDGNVGVSISRSLLPVAARALRINISQLGPHVLPYSEQLKYLWSVVCKKSKTYVPNFKKAFEHFCIHAGGRAIIDAVEENLKLSKEDGEASRMTLYRFGNTSSSSYWYELCYLEAKGKVKKGDRVWQIAFGSGFKVNSAVWKCVSNLDPKERNAWSDRIHLYPVDI
FSGVYLVDFTCYHPADSLRVPFSHFVEHFTTSNVFDKESLDFQEKVLEKSGIGDESCIPLNLHEMQPDVSLKRSREETEEVLCTIVKDLLSKHKINPKSIDILVTNCSIFCPTPSISSMIINKFGFRSNIKSINLSGMGCSAGILSISLVKDLLKVHKNSLALVLSMEAISSNGYTGSTKSMLISNTVFRMGGAAILLSNRQQDKHIAKYKLKHLVRTHMGYDDQAYSSVFQQQDKDGNVGVSISRSLLPVAARALRINISQLGPHVLPYSEQLKYLWSVVCKKSKTYVPNFKKAFEHFCIHAGGRAIIDAVEENLKLSKEDGEASRMTLYRFGNTSSSSYWYELCYLEAKGKVKKGDRVWQIAFGSGFKVNSAVWKCVSNLDPKERNAWSDRIHLYPVDI
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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FSGVYLVDFTCYHPADSLRVPFSHFVEHFTTSNVFDKESLDFQEKVLEKSGIGDESCIPLNLHEMQPDVSLKRSREETEEVLCTIVKDLLSKHKINPKSIDILVTNCSIFCPTPSISSMIINKFGFRSNIKSINLSGMGCSAGILSISLVKDLLKVHKNSLALVLSMEAISSNGYTGSTKSMLISNTVFRMGGAAILLSNRQQDKHIAKYKLKHLVRTHMGYDDQAYSSVFQQQDKDGNVGVSISRSLLPVAARALRINISQLGPHVLPYSEQLKYLWSVVCKKSKTYVPNFKKAFEHFCIHAGGRAIIDAVEENLKLSKEDGEASRMTLYRFGNTSSSSYWYELCYLEAKGKVKKGDRVWQIAFGSGFKVNSAVWKCVSNLDPKERNAWSDRIHLYPVDI
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query401 2.2.26 [Sep-21-2011]
Q9C992460 3-ketoacyl-CoA synthase 7 yes no 0.987 0.860 0.68 1e-169
Q9C6L5492 3-ketoacyl-CoA synthase 5 no no 0.992 0.808 0.553 1e-134
Q9LN49516 3-ketoacyl-CoA synthase 4 no no 0.992 0.771 0.526 1e-131
Q9XF43497 3-ketoacyl-CoA synthase 6 no no 0.992 0.800 0.533 1e-130
Q9SIX1512 3-ketoacyl-CoA synthase 9 no no 0.992 0.777 0.533 1e-129
O65677487 Probable 3-ketoacyl-CoA s no no 0.992 0.817 0.512 1e-125
Q5XEP9528 3-ketoacyl-CoA synthase 1 no no 0.992 0.753 0.518 1e-123
Q9FH27464 Probable 3-ketoacyl-CoA s no no 0.992 0.857 0.535 1e-122
Q9SYZ0493 3-ketoacyl-CoA synthase 1 no no 0.992 0.807 0.533 1e-121
O48780509 3-ketoacyl-CoA synthase 1 no no 0.992 0.781 0.507 1e-121
>sp|Q9C992|KCS7_ARATH 3-ketoacyl-CoA synthase 7 OS=Arabidopsis thaliana GN=KCS7 PE=2 SV=1 Back     alignment and function desciption
 Score =  593 bits (1529), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 272/400 (68%), Positives = 338/400 (84%), Gaps = 4/400 (1%)

Query: 4   VYLVDFTCYHPADSLRVPFSHFVEHFTTSNVFDKESLDFQEKVLEKSGIGDESCIPLNLH 63
           +YL+DF+CY P D LR P S+F+EH T S VFD+ESLD Q+K+LE+SGI D++ +P  +H
Sbjct: 47  IYLIDFSCYQPPDFLRAPVSNFIEHLTISGVFDQESLDLQQKILERSGISDDASVPATVH 106

Query: 64  EMQPDVSLKRSREETEEVLCTIVKDLLSKHKINPKSIDILVTNCSIFCPTPSISSMIINK 123
           E+ P+ S+  +REET E+L  IV+DL SKH+I+PKSIDILV+NCS+FCP+PSI+SMIINK
Sbjct: 107 EIPPNASISAAREETHEILFAIVQDLFSKHEIDPKSIDILVSNCSLFCPSPSITSMIINK 166

Query: 124 FGFRSNIKSINLSGMGCSAGILSISLVKDLLKVHKNSLALVLSMEAISSNGYTGSTKSML 183
           FG RS+IKS +LSGMGCSAGILS++LVKDL+K+H +SLALVLSMEA+S NGY G  KSML
Sbjct: 167 FGMRSDIKSFSLSGMGCSAGILSVNLVKDLMKIHGDSLALVLSMEAVSPNGYRGKCKSML 226

Query: 184 ISNTVFRMGGAAILLSNRQQDKHIAKYKLKHLVRTHMGYDDQAYSSVFQQQDKDGNVGVS 243
           I+NT+FRMGGAAILLSNR+QD H AKYKL+H++RTH+G D ++Y SV QQ D++G VGV+
Sbjct: 227 IANTIFRMGGAAILLSNRKQDSHKAKYKLQHIIRTHVGSDTESYESVMQQVDEEGKVGVA 286

Query: 244 ISRSLLPVAARALRINISQLGPHVLPYSEQLKYLWSVVCKK----SKTYVPNFKKAFEHF 299
           +S+ L+ VA++AL+IN+ QLGP VLPYSEQLKY+ S + +K     + Y PNFKKAFEHF
Sbjct: 287 LSKQLVRVASKALKINVVQLGPRVLPYSEQLKYIISFIQRKWGMHKEIYTPNFKKAFEHF 346

Query: 300 CIHAGGRAIIDAVEENLKLSKEDGEASRMTLYRFGNTSSSSYWYELCYLEAKGKVKKGDR 359
           CIHAGGRAII+ VE++LKL KED EASR TLYR+GNTSSSS WYEL YLEAKG++K GD+
Sbjct: 347 CIHAGGRAIIEGVEKHLKLDKEDVEASRSTLYRYGNTSSSSLWYELQYLEAKGRMKMGDK 406

Query: 360 VWQIAFGSGFKVNSAVWKCVSNLDPKERNAWSDRIHLYPV 399
           VWQI FGSGFK NSAVWKC+S +D + RNAWSDRIHLYPV
Sbjct: 407 VWQIGFGSGFKANSAVWKCISEIDSRGRNAWSDRIHLYPV 446

Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 3EC: .EC: 1EC: .EC: -
>sp|Q9C6L5|KCS5_ARATH 3-ketoacyl-CoA synthase 5 OS=Arabidopsis thaliana GN=KCS5 PE=1 SV=1 Back     alignment and function description
>sp|Q9LN49|KCS4_ARATH 3-ketoacyl-CoA synthase 4 OS=Arabidopsis thaliana GN=KCS4 PE=2 SV=1 Back     alignment and function description
>sp|Q9XF43|KCS6_ARATH 3-ketoacyl-CoA synthase 6 OS=Arabidopsis thaliana GN=CUT1 PE=1 SV=1 Back     alignment and function description
>sp|Q9SIX1|KCS9_ARATH 3-ketoacyl-CoA synthase 9 OS=Arabidopsis thaliana GN=KCS9 PE=2 SV=1 Back     alignment and function description
>sp|O65677|KCS2_ARATH Probable 3-ketoacyl-CoA synthase 2 OS=Arabidopsis thaliana GN=KCS2 PE=2 SV=1 Back     alignment and function description
>sp|Q5XEP9|KCS17_ARATH 3-ketoacyl-CoA synthase 17 OS=Arabidopsis thaliana GN=KCS17 PE=2 SV=2 Back     alignment and function description
>sp|Q9FH27|KCS20_ARATH Probable 3-ketoacyl-CoA synthase 20 OS=Arabidopsis thaliana GN=KCS20 PE=2 SV=1 Back     alignment and function description
>sp|Q9SYZ0|KCS16_ARATH 3-ketoacyl-CoA synthase 16 OS=Arabidopsis thaliana GN=KCS16 PE=2 SV=1 Back     alignment and function description
>sp|O48780|KCS11_ARATH 3-ketoacyl-CoA synthase 11 OS=Arabidopsis thaliana GN=KCS11 PE=1 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query401
356557495451 PREDICTED: 3-ketoacyl-CoA synthase 7-lik 0.995 0.884 0.716 1e-175
255576796455 acyltransferase, putative [Ricinus commu 0.992 0.874 0.713 1e-174
224054260447 beta-ketoacyl-coa synthase family protei 0.990 0.888 0.727 1e-173
359486046496 PREDICTED: LOW QUALITY PROTEIN: 3-ketoac 1.0 0.808 0.703 1e-172
147826684459 hypothetical protein VITISV_024294 [Viti 1.0 0.873 0.703 1e-172
357445507456 3-ketoacyl-CoA synthase [Medicago trunca 0.995 0.875 0.709 1e-170
449446893462 PREDICTED: 3-ketoacyl-CoA synthase 7-lik 0.995 0.863 0.697 1e-170
297841883460 beta-ketoacyl-CoA synthase family protei 0.987 0.860 0.68 1e-168
15223964460 3-ketoacyl-CoA synthase 7 [Arabidopsis t 0.987 0.860 0.68 1e-167
298204536464 unnamed protein product [Vitis vinifera] 0.912 0.788 0.650 1e-151
>gi|356557495|ref|XP_003547051.1| PREDICTED: 3-ketoacyl-CoA synthase 7-like [Glycine max] Back     alignment and taxonomy information
 Score =  620 bits (1598), Expect = e-175,   Method: Compositional matrix adjust.
 Identities = 291/406 (71%), Positives = 351/406 (86%), Gaps = 7/406 (1%)

Query: 2   SGVYLVDFTCYHPADSLRVPFSHFVEHFTTSNVFDKESLDFQEKVLEKSGIGDESCIPLN 61
           S +YL+D+ CY P D+LR+P+SH VEHF   N FD E + F+ KVLE+SGIG E+C+P +
Sbjct: 42  SSIYLLDYVCYMPPDNLRLPYSHIVEHFELCN-FDPELIGFELKVLERSGIGVEACVPES 100

Query: 62  LHEMQPDVSLKRSREETEEVLCTIVKDLLSKHKINPKSIDILVTNCSIFCPTPSISSMII 121
           +HE+ PD S+KR++ E E VL  IVKDLLSKHK++PKSIDILV+NCS+FCPTPSI+SMII
Sbjct: 101 VHELPPDDSMKRAQAEVESVLFRIVKDLLSKHKVHPKSIDILVSNCSLFCPTPSITSMII 160

Query: 122 NKFGFRSNIKSINLSGMGCSAGILSISLVKDLLKVHKNSLALVLSMEAISSNGYTGSTKS 181
           NKFGFRSN+KS+NLSGMGCSAG+LSI+L KDLL+VHKNSLALVLSMEA++ NGY G+TKS
Sbjct: 161 NKFGFRSNVKSVNLSGMGCSAGLLSINLAKDLLRVHKNSLALVLSMEAVAPNGYRGNTKS 220

Query: 182 MLISNTVFRMGGAAILLSNRQQDKHIAKYKLKHLVRTHMGYDDQAYSSVFQQQDKDGNVG 241
            LI+N +FRMGGAAILLSN++Q K +AKYKL+HLVRTHMG +D+AY SV+Q+ D+D  VG
Sbjct: 221 KLIANVLFRMGGAAILLSNKKQHKPVAKYKLEHLVRTHMGSNDKAYQSVYQEPDEDEIVG 280

Query: 242 VSISRSLLPVAARALRINISQLGPHVLPYSEQLKYLWSVVCKK------SKTYVPNFKKA 295
           VS+SRSLL VAA ALR NI+ LGP VLPYSEQL+Y WSV+ +K       + YVPNF+KA
Sbjct: 281 VSLSRSLLSVAASALRTNITDLGPLVLPYSEQLRYGWSVISRKMWARGNKEMYVPNFRKA 340

Query: 296 FEHFCIHAGGRAIIDAVEENLKLSKEDGEASRMTLYRFGNTSSSSYWYELCYLEAKGKVK 355
           FEHFCIHAGG++++DA+EE+LKL K+DGEASRM LYRFGNTSSSS WYELCYLEAKG+VK
Sbjct: 341 FEHFCIHAGGKSVVDAIEESLKLHKKDGEASRMALYRFGNTSSSSVWYELCYLEAKGRVK 400

Query: 356 KGDRVWQIAFGSGFKVNSAVWKCVSNLDPKERNAWSDRIHLYPVDI 401
           KGDRVWQIAFGSGFK NSAVWKC+S++DP  RNAWSDRIHLYPV+I
Sbjct: 401 KGDRVWQIAFGSGFKCNSAVWKCLSDIDPNVRNAWSDRIHLYPVEI 446

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|255576796|ref|XP_002529285.1| acyltransferase, putative [Ricinus communis] gi|223531274|gb|EEF33117.1| acyltransferase, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|224054260|ref|XP_002298171.1| beta-ketoacyl-coa synthase family protein [Populus trichocarpa] gi|222845429|gb|EEE82976.1| beta-ketoacyl-coa synthase family protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|359486046|ref|XP_003633377.1| PREDICTED: LOW QUALITY PROTEIN: 3-ketoacyl-CoA synthase 7-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|147826684|emb|CAN66110.1| hypothetical protein VITISV_024294 [Vitis vinifera] Back     alignment and taxonomy information
>gi|357445507|ref|XP_003593031.1| 3-ketoacyl-CoA synthase [Medicago truncatula] gi|355482079|gb|AES63282.1| 3-ketoacyl-CoA synthase [Medicago truncatula] Back     alignment and taxonomy information
>gi|449446893|ref|XP_004141205.1| PREDICTED: 3-ketoacyl-CoA synthase 7-like [Cucumis sativus] gi|449489601|ref|XP_004158361.1| PREDICTED: 3-ketoacyl-CoA synthase 7-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|297841883|ref|XP_002888823.1| beta-ketoacyl-CoA synthase family protein [Arabidopsis lyrata subsp. lyrata] gi|297334664|gb|EFH65082.1| beta-ketoacyl-CoA synthase family protein [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|15223964|ref|NP_177272.1| 3-ketoacyl-CoA synthase 7 [Arabidopsis thaliana] gi|75308913|sp|Q9C992.1|KCS7_ARATH RecName: Full=3-ketoacyl-CoA synthase 7; Short=KCS-7; AltName: Full=Very long-chain fatty acid condensing enzyme 7; Short=VLCFA condensing enzyme 7 gi|12323432|gb|AAG51695.1|AC016972_14 putative ketoacyl-CoA synthase; 54926-53544 [Arabidopsis thaliana] gi|50253508|gb|AAT71956.1| At1g71160 [Arabidopsis thaliana] gi|332197046|gb|AEE35167.1| 3-ketoacyl-CoA synthase 7 [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|298204536|emb|CBI23811.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query401
TAIR|locus:2026331460 KCS7 "3-ketoacyl-CoA synthase 0.987 0.860 0.68 4.1e-152
TAIR|locus:2031260492 KCS5 "3-ketoacyl-CoA synthase 0.992 0.808 0.553 4.6e-121
TAIR|locus:2016397516 KCS4 "3-ketoacyl-CoA synthase 0.992 0.771 0.526 2e-118
TAIR|locus:2201262497 KCS6 "3-ketoacyl-CoA synthase 0.990 0.798 0.537 2e-118
TAIR|locus:2042684512 KCS9 "3-ketoacyl-CoA synthase 0.992 0.777 0.533 7.9e-117
TAIR|locus:2155194464 KCS21 "3-ketoacyl-CoA synthase 0.992 0.857 0.535 6.4e-115
TAIR|locus:2139579487 KCS17 "3-ketoacyl-CoA synthase 0.992 0.817 0.512 2.5e-113
TAIR|locus:2020215528 KCS2 "3-ketoacyl-CoA synthase 0.992 0.753 0.520 5.3e-111
TAIR|locus:2043849509 KCS11 "3-ketoacyl-CoA synthase 0.992 0.781 0.507 4.8e-110
TAIR|locus:2116144493 KCS16 "3-ketoacyl-CoA synthase 0.992 0.807 0.533 1.6e-109
TAIR|locus:2026331 KCS7 "3-ketoacyl-CoA synthase 7" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1484 (527.5 bits), Expect = 4.1e-152, P = 4.1e-152
 Identities = 272/400 (68%), Positives = 338/400 (84%)

Query:     4 VYLVDFTCYHPADSLRVPFSHFVEHFTTSNVFDKESLDFQEKVLEKSGIGDESCIPLNLH 63
             +YL+DF+CY P D LR P S+F+EH T S VFD+ESLD Q+K+LE+SGI D++ +P  +H
Sbjct:    47 IYLIDFSCYQPPDFLRAPVSNFIEHLTISGVFDQESLDLQQKILERSGISDDASVPATVH 106

Query:    64 EMQPDVSLKRSREETEEVLCTIVKDLLSKHKINPKSIDILVTNCSIFCPTPSISSMIINK 123
             E+ P+ S+  +REET E+L  IV+DL SKH+I+PKSIDILV+NCS+FCP+PSI+SMIINK
Sbjct:   107 EIPPNASISAAREETHEILFAIVQDLFSKHEIDPKSIDILVSNCSLFCPSPSITSMIINK 166

Query:   124 FGFRSNIKSINLSGMGCSAGILSISLVKDLLKVHKNSLALVLSMEAISSNGYTGSTKSML 183
             FG RS+IKS +LSGMGCSAGILS++LVKDL+K+H +SLALVLSMEA+S NGY G  KSML
Sbjct:   167 FGMRSDIKSFSLSGMGCSAGILSVNLVKDLMKIHGDSLALVLSMEAVSPNGYRGKCKSML 226

Query:   184 ISNTVFRMGGAAILLSNRQQDKHIAKYKLKHLVRTHMGYDDQAYSSVFQQQDKDGNVGVS 243
             I+NT+FRMGGAAILLSNR+QD H AKYKL+H++RTH+G D ++Y SV QQ D++G VGV+
Sbjct:   227 IANTIFRMGGAAILLSNRKQDSHKAKYKLQHIIRTHVGSDTESYESVMQQVDEEGKVGVA 286

Query:   244 ISRSLLPVAARALRINISQLGPHVLPYSEQLKYLWSVVCKK----SKTYVPNFKKAFEHF 299
             +S+ L+ VA++AL+IN+ QLGP VLPYSEQLKY+ S + +K     + Y PNFKKAFEHF
Sbjct:   287 LSKQLVRVASKALKINVVQLGPRVLPYSEQLKYIISFIQRKWGMHKEIYTPNFKKAFEHF 346

Query:   300 CIHAGGRAIIDAVEENLKLSKEDGEASRMTLYRFGNTSSSSYWYELCYLEAKGKVKKGDR 359
             CIHAGGRAII+ VE++LKL KED EASR TLYR+GNTSSSS WYEL YLEAKG++K GD+
Sbjct:   347 CIHAGGRAIIEGVEKHLKLDKEDVEASRSTLYRYGNTSSSSLWYELQYLEAKGRMKMGDK 406

Query:   360 VWQIAFGSGFKVNSAVWKCVSNLDPKERNAWSDRIHLYPV 399
             VWQI FGSGFK NSAVWKC+S +D + RNAWSDRIHLYPV
Sbjct:   407 VWQIGFGSGFKANSAVWKCISEIDSRGRNAWSDRIHLYPV 446
GO:0003824 "catalytic activity" evidence=IEA
GO:0006633 "fatty acid biosynthetic process" evidence=IEA
GO:0008152 "metabolic process" evidence=IEA
GO:0008610 "lipid biosynthetic process" evidence=IEA
GO:0009507 "chloroplast" evidence=ISM
GO:0016020 "membrane" evidence=IEA
GO:0016746 "transferase activity, transferring acyl groups" evidence=ISS
GO:0016747 "transferase activity, transferring acyl groups other than amino-acyl groups" evidence=IEA
GO:0000038 "very long-chain fatty acid metabolic process" evidence=IDA
GO:0042335 "cuticle development" evidence=IDA
TAIR|locus:2031260 KCS5 "3-ketoacyl-CoA synthase 5" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2016397 KCS4 "3-ketoacyl-CoA synthase 4" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2201262 KCS6 "3-ketoacyl-CoA synthase 6" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2042684 KCS9 "3-ketoacyl-CoA synthase 9" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2155194 KCS21 "3-ketoacyl-CoA synthase 21" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2139579 KCS17 "3-ketoacyl-CoA synthase 17" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2020215 KCS2 "3-ketoacyl-CoA synthase 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2043849 KCS11 "3-ketoacyl-CoA synthase 11" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2116144 KCS16 "3-ketoacyl-CoA synthase 16" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q9C992KCS7_ARATH2, ., 3, ., 1, ., -0.680.98750.8608yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer2.3.10.921
3rd Layer2.3.1.1190.914

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
gw1.I.9853.1
beta-ketoacyl-coa synthase family protein (415 aa)
(Populus trichocarpa)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query401
PLN02377502 PLN02377, PLN02377, 3-ketoacyl-CoA synthase 1e-173
PLN02192511 PLN02192, PLN02192, 3-ketoacyl-CoA synthase 1e-169
PLN02854521 PLN02854, PLN02854, 3-ketoacyl-CoA synthase 1e-165
PLN02932478 PLN02932, PLN02932, 3-ketoacyl-CoA synthase 1e-160
pfam08392290 pfam08392, FAE1_CUT1_RppA, FAE1/Type III polyketid 1e-158
PLN00415466 PLN00415, PLN00415, 3-ketoacyl-CoA synthase 1e-136
cd00831361 cd00831, CHS_like, Chalcone and stilbene synthases 1e-117
COG3424356 COG3424, BcsA, Predicted naringenin-chalcone synth 5e-27
cd00827324 cd00827, init_cond_enzymes, "initiating" condensin 6e-15
cd00830320 cd00830, KAS_III, Ketoacyl-acyl carrier protein sy 7e-14
pfam0854190 pfam08541, ACP_syn_III_C, 3-Oxoacyl-[acyl-carrier- 6e-12
PRK12879325 PRK12879, PRK12879, 3-oxoacyl-(acyl carrier protei 2e-11
TIGR00747318 TIGR00747, fabH, 3-oxoacyl-(acyl-carrier-protein) 4e-10
COG0332323 COG0332, FabH, 3-oxoacyl-[acyl-carrier-protein] 7e-10
PLN03172393 PLN03172, PLN03172, chalcone synthase family prote 2e-09
PLN03170401 PLN03170, PLN03170, chalcone synthase; Provisional 4e-09
PLN03173391 PLN03173, PLN03173, chalcone synthase; Provisional 9e-09
PLN03169391 PLN03169, PLN03169, chalcone synthase family prote 1e-08
pfam02797151 pfam02797, Chal_sti_synt_C, Chalcone and stilbene 3e-08
PLN03171399 PLN03171, PLN03171, chalcone synthase-like protein 4e-07
PRK09352319 PRK09352, PRK09352, 3-oxoacyl-(acyl carrier protei 9e-07
PLN03168389 PLN03168, PLN03168, chalcone synthase; Provisional 8e-06
PLN02326379 PLN02326, PLN02326, 3-oxoacyl-[acyl-carrier-protei 2e-05
PRK05963326 PRK05963, PRK05963, 3-oxoacyl-(acyl carrier protei 3e-04
>gnl|CDD|166018 PLN02377, PLN02377, 3-ketoacyl-CoA synthase Back     alignment and domain information 
 Score =  492 bits (1267), Expect = e-173
 Identities = 216/403 (53%), Positives = 298/403 (73%), Gaps = 5/403 (1%)

Query: 4   VYLVDFTCYHPADSLRVPFSHFVEHFTTSNVFDKESLDFQEKVLEKSGIGDESCIPLNLH 63
           VYLVD++CY   D L+ PF+ F+EH   +  FD  SL+FQ K+LE+SG+G+++ +P  +H
Sbjct: 98  VYLVDYSCYRAPDHLKAPFARFMEHSRLTGDFDDSSLEFQRKILERSGLGEDTYVPEAMH 157

Query: 64  EMQPDVSLKRSREETEEVLCTIVKDLLSKHKINPKSIDILVTNCSIFCPTPSISSMIINK 123
            + P  S+  +REE E+V+   + +L +   +NPK I ILV NCS+F PTPS+S+MI+NK
Sbjct: 158 YIPPRPSMAAAREEAEQVMFGALDNLFANTNVNPKDIGILVVNCSLFNPTPSLSAMIVNK 217

Query: 124 FGFRSNIKSINLSGMGCSAGILSISLVKDLLKVHKNSLALVLSMEAISSNGYTGSTKSML 183
           +  R NI+S NL GMGCSAG++++ L KD+L+VH+N+ A+V+S E I+ N Y G+ KSML
Sbjct: 218 YKLRGNIRSFNLGGMGCSAGVIAVDLAKDMLQVHRNTYAVVVSTENITQNWYFGNKKSML 277

Query: 184 ISNTVFRMGGAAILLSNRQQDKHIAKYKLKHLVRTHMGYDDQAYSSVFQQQDKDGNVGVS 243
           I N +FR+GG+A+LLSN+ +DK  +KYKL H+VRTH G DD+A+  V+Q+QD  G  GVS
Sbjct: 278 IPNCLFRVGGSAVLLSNKSRDKRRSKYKLVHVVRTHRGADDKAFRCVYQEQDDAGKTGVS 337

Query: 244 ISRSLLPVAARALRINISQLGPHVLPYSEQLKYLWSVVCK-----KSKTYVPNFKKAFEH 298
           +S+ L+ +A  AL+ NI+ LGP VLP SEQL +  ++V K     K K Y+P+FK AF+H
Sbjct: 338 LSKDLMAIAGEALKTNITTLGPLVLPISEQLLFFATLVVKKLFNKKMKPYIPDFKLAFDH 397

Query: 299 FCIHAGGRAIIDAVEENLKLSKEDGEASRMTLYRFGNTSSSSYWYELCYLEAKGKVKKGD 358
           FCIHAGGRA+ID +E+NL+L     EASRMTL+RFGNTSSSS WYEL Y+EAKG+++KG+
Sbjct: 398 FCIHAGGRAVIDELEKNLQLLPVHVEASRMTLHRFGNTSSSSIWYELAYIEAKGRMRKGN 457

Query: 359 RVWQIAFGSGFKVNSAVWKCVSNLDPKERNAWSDRIHLYPVDI 401
           RVWQIAFGSGFK NSAVW+ + ++ P   + W D I  YPV +
Sbjct: 458 RVWQIAFGSGFKCNSAVWEALRHVKPSNNSPWEDCIDKYPVKL 500

Length = 502
>gnl|CDD|215123 PLN02192, PLN02192, 3-ketoacyl-CoA synthase Back     alignment and domain information
>gnl|CDD|215459 PLN02854, PLN02854, 3-ketoacyl-CoA synthase Back     alignment and domain information
>gnl|CDD|178520 PLN02932, PLN02932, 3-ketoacyl-CoA synthase Back     alignment and domain information
>gnl|CDD|116972 pfam08392, FAE1_CUT1_RppA, FAE1/Type III polyketide synthase-like protein Back     alignment and domain information
>gnl|CDD|177808 PLN00415, PLN00415, 3-ketoacyl-CoA synthase Back     alignment and domain information
>gnl|CDD|238427 cd00831, CHS_like, Chalcone and stilbene synthases; plant-specific polyketide synthases (PKS) and related enzymes, also called type III PKSs Back     alignment and domain information
>gnl|CDD|225958 COG3424, BcsA, Predicted naringenin-chalcone synthase [Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>gnl|CDD|238423 cd00827, init_cond_enzymes, "initiating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type III and polyketide synthases, type III, which include chalcone synthase and related enzymes Back     alignment and domain information
>gnl|CDD|238426 cd00830, KAS_III, Ketoacyl-acyl carrier protein synthase III (KASIII) initiates the elongation in type II fatty acid synthase systems Back     alignment and domain information
>gnl|CDD|117118 pfam08541, ACP_syn_III_C, 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal Back     alignment and domain information
>gnl|CDD|237245 PRK12879, PRK12879, 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed Back     alignment and domain information
>gnl|CDD|233113 TIGR00747, fabH, 3-oxoacyl-(acyl-carrier-protein) synthase III Back     alignment and domain information
>gnl|CDD|223409 COG0332, FabH, 3-oxoacyl-[acyl-carrier-protein] Back     alignment and domain information
>gnl|CDD|178716 PLN03172, PLN03172, chalcone synthase family protein; Provisional Back     alignment and domain information
>gnl|CDD|178714 PLN03170, PLN03170, chalcone synthase; Provisional Back     alignment and domain information
>gnl|CDD|178717 PLN03173, PLN03173, chalcone synthase; Provisional Back     alignment and domain information
>gnl|CDD|215612 PLN03169, PLN03169, chalcone synthase family protein; Provisional Back     alignment and domain information
>gnl|CDD|111670 pfam02797, Chal_sti_synt_C, Chalcone and stilbene synthases, C-terminal domain Back     alignment and domain information
>gnl|CDD|178715 PLN03171, PLN03171, chalcone synthase-like protein; Provisional Back     alignment and domain information
>gnl|CDD|236475 PRK09352, PRK09352, 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed Back     alignment and domain information
>gnl|CDD|178712 PLN03168, PLN03168, chalcone synthase; Provisional Back     alignment and domain information
>gnl|CDD|215185 PLN02326, PLN02326, 3-oxoacyl-[acyl-carrier-protein] synthase III Back     alignment and domain information
>gnl|CDD|180328 PRK05963, PRK05963, 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 401
PLN02932478 3-ketoacyl-CoA synthase 100.0
PLN02854521 3-ketoacyl-CoA synthase 100.0
PLN02377502 3-ketoacyl-CoA synthase 100.0
PLN02192511 3-ketoacyl-CoA synthase 100.0
PLN00415466 3-ketoacyl-CoA synthase 100.0
COG0332323 FabH 3-oxoacyl-[acyl-carrier-protein] 100.0
PLN03172393 chalcone synthase family protein; Provisional 100.0
PLN03168389 chalcone synthase; Provisional 100.0
PLN03169391 chalcone synthase family protein; Provisional 100.0
COG3424356 BcsA Predicted naringenin-chalcone synthase [Secon 100.0
PLN03170401 chalcone synthase; Provisional 100.0
cd00831361 CHS_like Chalcone and stilbene synthases; plant-sp 100.0
PLN03173391 chalcone synthase; Provisional 100.0
PRK12880353 3-oxoacyl-(acyl carrier protein) synthase III; Rev 100.0
PLN03171399 chalcone synthase-like protein; Provisional 100.0
PRK05963326 3-oxoacyl-(acyl carrier protein) synthase II; Revi 100.0
PLN02326379 3-oxoacyl-[acyl-carrier-protein] synthase III 100.0
CHL00203326 fabH 3-oxoacyl-acyl-carrier-protein synthase 3; Pr 100.0
PRK07204329 3-oxoacyl-(acyl carrier protein) synthase III; Rev 100.0
PRK12879325 3-oxoacyl-(acyl carrier protein) synthase III; Rev 100.0
PRK09258338 3-oxoacyl-(acyl carrier protein) synthase III; Rev 100.0
PRK06840339 hypothetical protein; Validated 100.0
cd00830320 KAS_III Ketoacyl-acyl carrier protein synthase III 100.0
TIGR00747318 fabH 3-oxoacyl-(acyl-carrier-protein) synthase III 100.0
PRK09352319 3-oxoacyl-(acyl carrier protein) synthase III; Rev 100.0
PRK06816378 3-oxoacyl-(acyl carrier protein) synthase III; Rev 100.0
PRK04262347 hypothetical protein; Provisional 100.0
TIGR00748345 HMG_CoA_syn_Arc hydroxymethylglutaryl-CoA synthase 100.0
PRK07515372 3-oxoacyl-(acyl carrier protein) synthase III; Rev 100.0
PF08392290 FAE1_CUT1_RppA: FAE1/Type III polyketide synthase- 100.0
cd00827324 init_cond_enzymes "initiating" condensing enzymes 100.0
TIGR01835379 HMG-CoA-S_prok 3-hydroxy-3-methylglutaryl CoA synt 100.0
PLN02577459 hydroxymethylglutaryl-CoA synthase 100.0
COG3425377 PksG 3-hydroxy-3-methylglutaryl CoA synthase [Lipi 100.0
TIGR01833454 HMG-CoA-S_euk 3-hydroxy-3-methylglutaryl-CoA-synth 100.0
PF00195226 Chal_sti_synt_N: Chalcone and stilbene synthases, 100.0
cd00327254 cond_enzymes Condensing enzymes; Family of enzymes 99.96
cd00825332 decarbox_cond_enzymes decarboxylating condensing e 99.94
PF0854190 ACP_syn_III_C: 3-Oxoacyl-[acyl-carrier-protein (AC 99.86
KOG1393462 consensus Hydroxymethylglutaryl-CoA synthase [Lipi 99.82
PF02797151 Chal_sti_synt_C: Chalcone and stilbene synthases, 99.82
PRK06147348 3-oxoacyl-(acyl carrier protein) synthase; Validat 99.81
PF01154174 HMG_CoA_synt_N: Hydroxymethylglutaryl-coenzyme A s 99.81
TIGR02845327 spore_V_AD stage V sporulation protein AD. Bacillu 99.77
PRK08304337 stage V sporulation protein AD; Validated 99.69
cd00834406 KAS_I_II Beta-ketoacyl-acyl carrier protein (ACP) 99.63
cd00751386 thiolase Thiolase are ubiquitous enzymes that cata 99.61
PRK05656393 acetyl-CoA acetyltransferase; Provisional 99.6
TIGR01930386 AcCoA-C-Actrans acetyl-CoA acetyltransferases. Thi 99.57
PF0854580 ACP_syn_III: 3-Oxoacyl-[acyl-carrier-protein (ACP) 99.54
PRK09051394 beta-ketothiolase; Provisional 99.54
cd00828407 elong_cond_enzymes "elongating" condensing enzymes 99.51
PRK06064389 acetyl-CoA acetyltransferase; Provisional 99.51
smart00825424 PKS_KS Beta-ketoacyl synthase. The structure of be 99.5
PRK08313386 acetyl-CoA acetyltransferase; Provisional 99.47
cd00829375 SCP-x_thiolase Thiolase domain associated with ste 99.47
PRK05790393 putative acyltransferase; Provisional 99.46
PRK06501425 3-oxoacyl-(acyl carrier protein) synthase II; Revi 99.42
cd00833421 PKS polyketide synthases (PKSs) polymerize simple 99.42
PRK06025417 acetyl-CoA acetyltransferase; Provisional 99.41
PRK12404334 stage V sporulation protein AD; Provisional 99.41
PRK06445394 acetyl-CoA acetyltransferase; Provisional 99.4
PRK07314411 3-oxoacyl-(acyl carrier protein) synthase II; Revi 99.39
PRK07661391 acetyl-CoA acetyltransferase; Provisional 99.38
PRK06690361 acetyl-CoA acetyltransferase; Provisional 99.35
PRK07103410 polyketide beta-ketoacyl:acyl carrier protein synt 99.35
TIGR03150407 fabF beta-ketoacyl-acyl-carrier-protein synthase I 99.34
PRK07850387 acetyl-CoA acetyltransferase; Provisional 99.33
PRK06158384 thiolase; Provisional 99.31
PLN02644394 acetyl-CoA C-acetyltransferase 99.3
PRK07108392 acetyl-CoA acetyltransferase; Provisional 99.28
PRK08256391 lipid-transfer protein; Provisional 99.28
PRK08439406 3-oxoacyl-(acyl carrier protein) synthase II; Revi 99.27
PRK06205404 acetyl-CoA acetyltransferase; Provisional 99.25
PRK08235393 acetyl-CoA acetyltransferase; Provisional 99.25
PRK08242402 acetyl-CoA acetyltransferase; Validated 99.23
PRK12578385 acetyl-CoA acetyltransferase; Provisional 99.21
PRK09052399 acetyl-CoA acetyltransferase; Provisional 99.2
PRK05952381 3-oxoacyl-(acyl carrier protein) synthase II; Revi 99.2
PRK09185392 3-oxoacyl-(acyl carrier protein) synthase I; Revie 99.2
PRK08722414 3-oxoacyl-(acyl carrier protein) synthase II; Revi 99.2
PRK08170426 acetyl-CoA acetyltransferase; Provisional 99.19
PRK09116405 3-oxoacyl-(acyl carrier protein) synthase II; Revi 99.18
PF00108264 Thiolase_N: Thiolase, N-terminal domain; InterPro: 99.17
PRK07801382 acetyl-CoA acetyltransferase; Provisional 99.17
PRK06059399 lipid-transfer protein; Provisional 99.17
PRK06333424 3-oxoacyl-(acyl carrier protein) synthase II; Revi 99.15
cd00832399 CLF Chain-length factor (CLF) is a factor required 99.13
PLN02836437 3-oxoacyl-[acyl-carrier-protein] synthase 99.13
PRK06065392 acetyl-CoA acetyltransferase; Provisional 99.13
PRK06954397 acetyl-CoA acetyltransferase; Provisional 99.13
cd00826393 nondecarbox_cond_enzymes nondecarboxylating conden 99.11
PTZ00050421 3-oxoacyl-acyl carrier protein synthase; Provision 99.09
PLN02787540 3-oxoacyl-[acyl-carrier-protein] synthase II 99.09
PRK07967406 3-oxoacyl-(acyl carrier protein) synthase I; Revie 99.09
PRK07910418 3-oxoacyl-(acyl carrier protein) synthase II; Revi 99.05
PLN02287452 3-ketoacyl-CoA thiolase 99.04
PRK08257 498 acetyl-CoA acetyltransferase; Validated 99.03
PRK13359400 beta-ketoadipyl CoA thiolase; Provisional 98.99
PRK08963428 fadI 3-ketoacyl-CoA thiolase; Reviewed 98.99
PRK07851406 acetyl-CoA acetyltransferase; Provisional 98.99
PRK08131401 acetyl-CoA acetyltransferase; Provisional 98.97
PRK06519398 3-oxoacyl-(acyl carrier protein) synthase II; Revi 98.97
PRK14691342 3-oxoacyl-(acyl carrier protein) synthase II; Prov 98.97
PRK06633392 acetyl-CoA acetyltransferase; Provisional 98.96
PRK06289403 acetyl-CoA acetyltransferase; Provisional 98.96
PRK07516389 acetyl-CoA acetyltransferase; Provisional 98.95
PRK06366388 acetyl-CoA acetyltransferase; Provisional 98.95
PF00109254 ketoacyl-synt: Beta-ketoacyl synthase, N-terminal 98.93
PRK09050401 beta-ketoadipyl CoA thiolase; Validated 98.93
TIGR02446430 FadI fatty oxidation complex, beta subunit FadI. T 98.92
TIGR02430400 pcaF beta-ketoadipyl CoA thiolase. Members of this 98.91
PTZ00455438 3-ketoacyl-CoA thiolase; Provisional 98.9
PRK06157398 acetyl-CoA acetyltransferase; Validated 98.89
PRK06504390 acetyl-CoA acetyltransferase; Provisional 98.87
PRK08947387 fadA 3-ketoacyl-CoA thiolase; Reviewed 98.84
PRK06365430 acetyl-CoA acetyltransferase; Provisional 98.8
PRK09268427 acetyl-CoA acetyltransferase; Provisional 98.76
TIGR02445385 fadA fatty oxidation complex, beta subunit FadA. T 98.75
PF07451329 SpoVAD: Stage V sporulation protein AD (SpoVAD); I 98.69
TIGR02813 2582 omega_3_PfaA polyketide-type polyunsaturated fatty 98.63
KOG1389435 consensus 3-oxoacyl CoA thiolase [Lipid transport 98.55
PRK08142388 acetyl-CoA acetyltransferase; Provisional 98.53
COG0304412 FabB 3-oxoacyl-(acyl-carrier-protein) synthase [Li 98.49
PRK07855386 lipid-transfer protein; Provisional 98.4
PRK06066385 acetyl-CoA acetyltransferase; Provisional 98.26
COG0183392 PaaJ Acetyl-CoA acetyltransferase [Lipid metabolis 98.16
KOG1406408 consensus Peroxisomal 3-ketoacyl-CoA-thiolase P-44 98.12
KOG1390396 consensus Acetyl-CoA acetyltransferase [Lipid tran 98.08
COG3321 1061 Polyketide synthase modules and related proteins [ 98.07
PRK07937352 lipid-transfer protein; Provisional 98.02
KOG1394440 consensus 3-oxoacyl-(acyl-carrier-protein) synthas 97.81
KOG1391396 consensus Acetyl-CoA acetyltransferase [Lipid tran 97.53
PF08540282 HMG_CoA_synt_C: Hydroxymethylglutaryl-coenzyme A s 97.5
KOG1392465 consensus Acetyl-CoA acetyltransferase [Lipid tran 97.29
PF0854190 ACP_syn_III_C: 3-Oxoacyl-[acyl-carrier-protein (AC 96.22
PF13723218 Ketoacyl-synt_2: Beta-ketoacyl synthase, N-termina 95.4
PRK06816378 3-oxoacyl-(acyl carrier protein) synthase III; Rev 94.92
TIGR00748345 HMG_CoA_syn_Arc hydroxymethylglutaryl-CoA synthase 94.9
PRK07204329 3-oxoacyl-(acyl carrier protein) synthase III; Rev 94.53
CHL00203326 fabH 3-oxoacyl-acyl-carrier-protein synthase 3; Pr 94.31
PRK05963326 3-oxoacyl-(acyl carrier protein) synthase II; Revi 94.09
PRK09258338 3-oxoacyl-(acyl carrier protein) synthase III; Rev 94.08
PRK12879325 3-oxoacyl-(acyl carrier protein) synthase III; Rev 94.02
PRK06025417 acetyl-CoA acetyltransferase; Provisional 93.68
PLN02326379 3-oxoacyl-[acyl-carrier-protein] synthase III 93.63
PRK06954397 acetyl-CoA acetyltransferase; Provisional 93.37
PRK08242402 acetyl-CoA acetyltransferase; Validated 93.31
PRK08235393 acetyl-CoA acetyltransferase; Provisional 93.21
cd00830320 KAS_III Ketoacyl-acyl carrier protein synthase III 93.2
PRK06840339 hypothetical protein; Validated 93.14
PRK07108392 acetyl-CoA acetyltransferase; Provisional 93.1
PRK04262347 hypothetical protein; Provisional 93.0
TIGR00747318 fabH 3-oxoacyl-(acyl-carrier-protein) synthase III 92.9
PRK07851406 acetyl-CoA acetyltransferase; Provisional 92.77
PRK09052399 acetyl-CoA acetyltransferase; Provisional 92.46
PRK09352319 3-oxoacyl-(acyl carrier protein) synthase III; Rev 92.46
COG0332323 FabH 3-oxoacyl-[acyl-carrier-protein] 92.27
PRK13359400 beta-ketoadipyl CoA thiolase; Provisional 91.8
PRK06504390 acetyl-CoA acetyltransferase; Provisional 91.59
TIGR02430400 pcaF beta-ketoadipyl CoA thiolase. Members of this 91.23
PRK06205404 acetyl-CoA acetyltransferase; Provisional 91.02
COG3425377 PksG 3-hydroxy-3-methylglutaryl CoA synthase [Lipi 90.71
PRK06633392 acetyl-CoA acetyltransferase; Provisional 90.68
PRK07515372 3-oxoacyl-(acyl carrier protein) synthase III; Rev 90.59
cd00825332 decarbox_cond_enzymes decarboxylating condensing e 90.37
PF02803123 Thiolase_C: Thiolase, C-terminal domain; InterPro: 90.18
PRK08963428 fadI 3-ketoacyl-CoA thiolase; Reviewed 90.06
PF02803123 Thiolase_C: Thiolase, C-terminal domain; InterPro: 90.03
PRK06366388 acetyl-CoA acetyltransferase; Provisional 89.85
PRK09050401 beta-ketoadipyl CoA thiolase; Validated 89.67
PRK06147348 3-oxoacyl-(acyl carrier protein) synthase; Validat 89.32
cd00831361 CHS_like Chalcone and stilbene synthases; plant-sp 88.83
KOG1202 2376 consensus Animal-type fatty acid synthase and rela 87.93
PRK07850387 acetyl-CoA acetyltransferase; Provisional 87.76
cd00327254 cond_enzymes Condensing enzymes; Family of enzymes 87.55
PRK06690361 acetyl-CoA acetyltransferase; Provisional 87.0
PRK12880353 3-oxoacyl-(acyl carrier protein) synthase III; Rev 86.5
PRK08257498 acetyl-CoA acetyltransferase; Validated 86.26
cd00751386 thiolase Thiolase are ubiquitous enzymes that cata 85.75
TIGR02445385 fadA fatty oxidation complex, beta subunit FadA. T 85.6
PRK08947387 fadA 3-ketoacyl-CoA thiolase; Reviewed 85.22
cd00827324 init_cond_enzymes "initiating" condensing enzymes 84.71
PRK06445394 acetyl-CoA acetyltransferase; Provisional 83.96
PRK05656393 acetyl-CoA acetyltransferase; Provisional 83.58
COG1214220 Inactive homolog of metal-dependent proteases, put 83.23
PLN03169391 chalcone synthase family protein; Provisional 82.99
TIGR01835379 HMG-CoA-S_prok 3-hydroxy-3-methylglutaryl CoA synt 82.59
PRK05790393 putative acyltransferase; Provisional 82.26
cd00829375 SCP-x_thiolase Thiolase domain associated with ste 81.7
PRK08131401 acetyl-CoA acetyltransferase; Provisional 81.37
PRK12578385 acetyl-CoA acetyltransferase; Provisional 81.06
PRK09051394 beta-ketothiolase; Provisional 80.92
COG0533342 QRI7 Metal-dependent proteases with possible chape 80.13
>PLN02932 3-ketoacyl-CoA synthase Back     alignment and domain information 
Probab=100.00  E-value=1.3e-71  Score=553.88  Aligned_cols=400  Identities=55%  Similarity=0.921  Sum_probs=357.9

Q ss_pred             CceEEEeeeeecCCCCCccCHHHHHHHHHhc---CCCChhh---HHHHHHHHHHcCCCCceecCCCccCCCCCCChHHHH
Q 044359            2 SGVYLVDFTCYHPADSLRVPFSHFVEHFTTS---NVFDKES---LDFQEKVLEKSGIGDESCIPLNLHEMQPDVSLKRSR   75 (401)
Q Consensus         2 ~~v~I~~~g~~lP~~~~~v~~~e~~~~~~~~---~~~~~~~---~~~~~~i~~~~GI~~R~~~~~~~~~~~~~~~l~~~~   75 (401)
                      ++||++..++|.|++.++|+.+.+.+++...   +.+++++   ++|++||++++||.+|+++++.....+++++++.++
T Consensus        66 ~~vyl~d~~c~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~i~~rsGig~~t~~p~~~~~~~~~~~~~~~~  145 (478)
T PLN02932         66 KPVYLVDFSCYLPPSHLKASIQTIMGHVRRVREAGAWKQESDYLMDFCEKILERSGLGQETYIPEGLQCLPLQQNLAVSR  145 (478)
T ss_pred             CcEEEEeeeeecCcccccccHHHHHHHHHhhcccCCCCccchhHHHHHHHHHHHcCCCCceeeccccccCCHHHHHHHHH
Confidence            4799999999999999999999999988654   5677766   999999999999999999988766667777889999


Q ss_pred             HHHHHHHHHHHHHHHHhCCCCcCCcCEEEEeeecCCCCCcHHHHHHHHcCCCCCcceEEeecccchhHHHHHHHHHHHHH
Q 044359           76 EETEEVLCTIVKDLLSKHKINPKSIDILVTNCSIFCPTPSISSMIINKFGFRSNIKSINLSGMGCSAGILSISLVKDLLK  155 (401)
Q Consensus        76 ~~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~l~~~LGl~~~~~~~~i~~~gC~~~~~aL~~A~~~i~  155 (401)
                      +++.+|+.+|+++||+++|++|+|||+||++|+++...|+++.+|+++||+++++.+||++++||+|++.||++|+++++
T Consensus       146 ~ea~~la~~Aa~~aL~~agi~p~dId~lIv~tst~~~~Pslaa~V~~~lGlr~~i~~fdL~gmGCSggl~aL~lA~~ll~  225 (478)
T PLN02932        146 KETEEVIIGAVDNLFRNTGISPSDIGILVVNSSTFNPTPSLSSILVNKFKLRDNIKSLNLGGMGCSAGVIAIDAAKSLLQ  225 (478)
T ss_pred             HHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEccCCCCCCcHHHHHHHHhCCCCCceEEEeccchhhhHHHHHHHHHHHHH
Confidence            99999999999999999999999999999998766689999999999999987899999998899999999999999999


Q ss_pred             cCCCCeEEEEeeccccCCCCCCCCcchhhhhhcccccceEEEEecCCCCccccceEEeeeeeecccCCcccccccccccc
Q 044359          156 VHKNSLALVLSMEAISSNGYTGSTKSMLISNTVFRMGGAAILLSNRQQDKHIAKYKLKHLVRTHMGYDDQAYSSVFQQQD  235 (401)
Q Consensus       156 ~g~~~~vLvv~~e~~s~~~~~~~d~~~~i~~~lfGDGAaA~ll~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~  235 (401)
                      +++.++||||++|.+|..++++++++.++++++|||||+|+||++.+.....++|++++.++++..+|+..+++++++.+
T Consensus       226 ~~~~~~aLVVstE~~S~~~~~~d~r~~l~t~~LFgDGAAAvlLs~~~~~~~~~~~~L~~~v~t~~~ad~~~~~~v~~~~d  305 (478)
T PLN02932        226 VHRNTYALVVSTENITQNLYLGNNKSMLVTNCLFRIGGAAILLSNRSRDRKRAKYELVHTVRVHTGADDRSYECATQEED  305 (478)
T ss_pred             cCCCCeEEEEEEeecccccCCCcchhhhccceeecccceEEEEecccccccCcceEEEeeeeeeeccCCCccccceeecc
Confidence            99999999999999999998876777778999999999999999866332235788888888899999999998888776


Q ss_pred             CCCCeeeEeccCchHHHHHHHHHHHHhhCCCCCchhHHHHHHHHHHhhhc-----cCCCcchhhhcceEeecCCChHHHH
Q 044359          236 KDGNVGVSISRSLLPVAARALRINISQLGPHVLPYSEQLKYLWSVVCKKS-----KTYVPNFKKAFEHFCIHAGGRAIID  310 (401)
Q Consensus       236 ~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-----~~l~~~~~~did~~i~Hq~~~~~~~  310 (401)
                      +.|..++.+++++|..+++.++.++..+++.+++..+.+.+.+..+.+.+     .++.++...+||+|++||+|+++++
T Consensus       306 ~~G~~g~~Lsk~lp~~~~~al~~ni~~~~p~v~p~~e~~~~~~~~~~~~~~k~~~~~~~~~~~~~id~f~iHqggr~IId  385 (478)
T PLN02932        306 EDGIVGVSLSKNLPMVAARTLKINIATLGPLVLPLSEKFHFFVRFVKKKFFNPKLKHYIPDFKLAFEHFCIHAGGRALID  385 (478)
T ss_pred             cCCcceeeECccchHHHHHHHhhhhhccccccccchhhhHHHHHHhHHHHHHHHhhcCcHhHHhhhceEEEccCCHHHHH
Confidence            66766889999999999999999998888888877777766655444332     3444444578999999999999999


Q ss_pred             HHHHHcCCCchhhhhhHHHHhhhcCcccchHHHHHHHHHHcCCCCCCCeEEEEeeccchhhcceeeeeeccCCcCCCCCc
Q 044359          311 AVEENLKLSKEDGEASRMTLYRFGNTSSSSYWYELCYLEAKGKVKKGDRVWQIAFGSGFKVNSAVWKCVSNLDPKERNAW  390 (401)
Q Consensus       311 ~~~~~lgi~~e~~~~s~~~~~~~Gn~~sasi~~~L~~~~~~g~l~~Gd~vll~~~G~G~s~~~~~l~~~~~~~~~~~~~~  390 (401)
                      .+++.||++++++..|+.++++||||+|+|+|+.|+++.++|++++||+|++++||+|++|++++||...++++++.|.|
T Consensus       386 av~k~LgL~~~~~e~s~~tL~rfGNTSSaSI~~~L~~~ea~grik~Gd~vl~iaFGsGf~~~s~vw~~~~~~~~~~~~~w  465 (478)
T PLN02932        386 EMEKNLHLTPLDVEASRMTLHRFGNTSSSSIWYELAYTEAKGRMKKGDRIWQIALGSGFKCNSSVWVALRNVKPSANNPW  465 (478)
T ss_pred             HHHHHcCCChHHHHHHHHHHHHhCChhhhHHHHHHHHHHHcCCCCCCCEEEEEEEeccHHHHHHHHHHhcCCCCcCCCCc
Confidence            99999999998888889999999999999999999999999999999999999999999999999999999999888999


Q ss_pred             ccccccCCCCC
Q 044359          391 SDRIHLYPVDI  401 (401)
Q Consensus       391 ~~~~~~~~~~~  401 (401)
                      +||||.|||++
T Consensus       466 ~~~i~~yp~~~  476 (478)
T PLN02932        466 EDCLHKYPVEI  476 (478)
T ss_pred             hhhHhhCCCCC
Confidence            99999999975

>PLN02854 3-ketoacyl-CoA synthase Back     alignment and domain information
>PLN02377 3-ketoacyl-CoA synthase Back     alignment and domain information
>PLN02192 3-ketoacyl-CoA synthase Back     alignment and domain information
>PLN00415 3-ketoacyl-CoA synthase Back     alignment and domain information
>COG0332 FabH 3-oxoacyl-[acyl-carrier-protein] Back     alignment and domain information
>PLN03172 chalcone synthase family protein; Provisional Back     alignment and domain information
>PLN03168 chalcone synthase; Provisional Back     alignment and domain information
>PLN03169 chalcone synthase family protein; Provisional Back     alignment and domain information
>COG3424 BcsA Predicted naringenin-chalcone synthase [Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>PLN03170 chalcone synthase; Provisional Back     alignment and domain information
>cd00831 CHS_like Chalcone and stilbene synthases; plant-specific polyketide synthases (PKS) and related enzymes, also called type III PKSs Back     alignment and domain information
>PLN03173 chalcone synthase; Provisional Back     alignment and domain information
>PRK12880 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed Back     alignment and domain information
>PLN03171 chalcone synthase-like protein; Provisional Back     alignment and domain information
>PRK05963 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed Back     alignment and domain information
>PLN02326 3-oxoacyl-[acyl-carrier-protein] synthase III Back     alignment and domain information
>CHL00203 fabH 3-oxoacyl-acyl-carrier-protein synthase 3; Provisional Back     alignment and domain information
>PRK07204 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed Back     alignment and domain information
>PRK12879 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed Back     alignment and domain information
>PRK09258 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed Back     alignment and domain information
>PRK06840 hypothetical protein; Validated Back     alignment and domain information
>cd00830 KAS_III Ketoacyl-acyl carrier protein synthase III (KASIII) initiates the elongation in type II fatty acid synthase systems Back     alignment and domain information
>TIGR00747 fabH 3-oxoacyl-(acyl-carrier-protein) synthase III Back     alignment and domain information
>PRK09352 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed Back     alignment and domain information
>PRK06816 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed Back     alignment and domain information
>PRK04262 hypothetical protein; Provisional Back     alignment and domain information
>TIGR00748 HMG_CoA_syn_Arc hydroxymethylglutaryl-CoA synthase, putative Back     alignment and domain information
>PRK07515 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed Back     alignment and domain information
>PF08392 FAE1_CUT1_RppA: FAE1/Type III polyketide synthase-like protein; InterPro: IPR013601 This domain is found in proteins that are described as 3-ketoacyl-CoA synthases, type III polyketide synthases, fatty acid elongases and fatty acid condensing enzymes, and are found in both prokaryotic and eukaryotic (mainly plant) species Back     alignment and domain information
>cd00827 init_cond_enzymes "initiating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type III and polyketide synthases, type III, which include chalcone synthase and related enzymes Back     alignment and domain information
>TIGR01835 HMG-CoA-S_prok 3-hydroxy-3-methylglutaryl CoA synthase, prokaryotic clade Back     alignment and domain information
>PLN02577 hydroxymethylglutaryl-CoA synthase Back     alignment and domain information
>COG3425 PksG 3-hydroxy-3-methylglutaryl CoA synthase [Lipid metabolism] Back     alignment and domain information
>TIGR01833 HMG-CoA-S_euk 3-hydroxy-3-methylglutaryl-CoA-synthase, eukaryotic clade Back     alignment and domain information
>PF00195 Chal_sti_synt_N: Chalcone and stilbene synthases, N-terminal domain; InterPro: IPR001099 Synonym(s): Chalcone synthase, Flavonone synthase, 6'-deoxychalcone synthase Naringenin-chalcone synthases (2 Back     alignment and domain information
>cd00327 cond_enzymes Condensing enzymes; Family of enzymes that catalyze a (decarboxylating or non-decarboxylating) Claisen-like condensation reaction Back     alignment and domain information
>cd00825 decarbox_cond_enzymes decarboxylating condensing enzymes; Family of enzymes that catalyze the formation of a new carbon-carbon bond by a decarboxylating Claisen-like condensation reaction Back     alignment and domain information
>PF08541 ACP_syn_III_C: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ; InterPro: IPR013747 This domain is found on 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 2 Back     alignment and domain information
>KOG1393 consensus Hydroxymethylglutaryl-CoA synthase [Lipid transport and metabolism] Back     alignment and domain information
>PF02797 Chal_sti_synt_C: Chalcone and stilbene synthases, C-terminal domain; InterPro: IPR012328 Synonym(s): Chalcone synthase, Flavonone synthase, 6'-deoxychalcone synthase Naringenin-chalcone synthases (2 Back     alignment and domain information
>PRK06147 3-oxoacyl-(acyl carrier protein) synthase; Validated Back     alignment and domain information
>PF01154 HMG_CoA_synt_N: Hydroxymethylglutaryl-coenzyme A synthase N terminal; InterPro: IPR013528 Synonym(s): 3-hydroxy-3-methylglutaryl-coenzyme A synthase, HMG-CoA synthase Back     alignment and domain information
>TIGR02845 spore_V_AD stage V sporulation protein AD Back     alignment and domain information
>PRK08304 stage V sporulation protein AD; Validated Back     alignment and domain information
>cd00834 KAS_I_II Beta-ketoacyl-acyl carrier protein (ACP) synthase (KAS), type I and II Back     alignment and domain information
>cd00751 thiolase Thiolase are ubiquitous enzymes that catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine Back     alignment and domain information
>PRK05656 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>TIGR01930 AcCoA-C-Actrans acetyl-CoA acetyltransferases Back     alignment and domain information
>PF08545 ACP_syn_III: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; InterPro: IPR013751 Fatty acid synthesis (FAS) is a vital aspect of cellular physiology which can occur by two distinct pathways Back     alignment and domain information
>PRK09051 beta-ketothiolase; Provisional Back     alignment and domain information
>cd00828 elong_cond_enzymes "elongating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type I and II and polyketide synthases Back     alignment and domain information
>PRK06064 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>smart00825 PKS_KS Beta-ketoacyl synthase Back     alignment and domain information
>PRK08313 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>cd00829 SCP-x_thiolase Thiolase domain associated with sterol carrier protein (SCP)-x isoform and related proteins; SCP-2 has multiple roles in intracellular lipid circulation and metabolism Back     alignment and domain information
>PRK05790 putative acyltransferase; Provisional Back     alignment and domain information
>PRK06501 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed Back     alignment and domain information
>cd00833 PKS polyketide synthases (PKSs) polymerize simple fatty acids into a large variety of different products, called polyketides, by successive decarboxylating Claisen condensations Back     alignment and domain information
>PRK06025 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PRK12404 stage V sporulation protein AD; Provisional Back     alignment and domain information
>PRK06445 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PRK07314 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed Back     alignment and domain information
>PRK07661 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PRK06690 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PRK07103 polyketide beta-ketoacyl:acyl carrier protein synthase; Validated Back     alignment and domain information
>TIGR03150 fabF beta-ketoacyl-acyl-carrier-protein synthase II Back     alignment and domain information
>PRK07850 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PRK06158 thiolase; Provisional Back     alignment and domain information
>PLN02644 acetyl-CoA C-acetyltransferase Back     alignment and domain information
>PRK07108 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PRK08256 lipid-transfer protein; Provisional Back     alignment and domain information
>PRK08439 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed Back     alignment and domain information
>PRK06205 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PRK08235 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PRK08242 acetyl-CoA acetyltransferase; Validated Back     alignment and domain information
>PRK12578 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PRK09052 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PRK05952 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed Back     alignment and domain information
>PRK09185 3-oxoacyl-(acyl carrier protein) synthase I; Reviewed Back     alignment and domain information
>PRK08722 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed Back     alignment and domain information
>PRK08170 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PRK09116 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed Back     alignment and domain information
>PF00108 Thiolase_N: Thiolase, N-terminal domain; InterPro: IPR020616 Two different types of thiolase [, , ] are found both in eukaryotes and in prokaryotes: acetoacetyl-CoA thiolase (2 Back     alignment and domain information
>PRK07801 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PRK06059 lipid-transfer protein; Provisional Back     alignment and domain information
>PRK06333 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed Back     alignment and domain information
>cd00832 CLF Chain-length factor (CLF) is a factor required for polyketide chain initiation of aromatic antibiotic-producing polyketide synthases (PKSs) of filamentous bacteria Back     alignment and domain information
>PLN02836 3-oxoacyl-[acyl-carrier-protein] synthase Back     alignment and domain information
>PRK06065 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PRK06954 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>cd00826 nondecarbox_cond_enzymes nondecarboxylating condensing enzymes; In general, thiolases catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine Back     alignment and domain information
>PTZ00050 3-oxoacyl-acyl carrier protein synthase; Provisional Back     alignment and domain information
>PLN02787 3-oxoacyl-[acyl-carrier-protein] synthase II Back     alignment and domain information
>PRK07967 3-oxoacyl-(acyl carrier protein) synthase I; Reviewed Back     alignment and domain information
>PRK07910 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed Back     alignment and domain information
>PLN02287 3-ketoacyl-CoA thiolase Back     alignment and domain information
>PRK08257 acetyl-CoA acetyltransferase; Validated Back     alignment and domain information
>PRK13359 beta-ketoadipyl CoA thiolase; Provisional Back     alignment and domain information
>PRK08963 fadI 3-ketoacyl-CoA thiolase; Reviewed Back     alignment and domain information
>PRK07851 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PRK08131 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PRK06519 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed Back     alignment and domain information
>PRK14691 3-oxoacyl-(acyl carrier protein) synthase II; Provisional Back     alignment and domain information
>PRK06633 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PRK06289 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PRK07516 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PRK06366 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PF00109 ketoacyl-synt: Beta-ketoacyl synthase, N-terminal domain; InterPro: IPR014030 Beta-ketoacyl-ACP synthase 2 Back     alignment and domain information
>PRK09050 beta-ketoadipyl CoA thiolase; Validated Back     alignment and domain information
>TIGR02446 FadI fatty oxidation complex, beta subunit FadI Back     alignment and domain information
>TIGR02430 pcaF beta-ketoadipyl CoA thiolase Back     alignment and domain information
>PTZ00455 3-ketoacyl-CoA thiolase; Provisional Back     alignment and domain information
>PRK06157 acetyl-CoA acetyltransferase; Validated Back     alignment and domain information
>PRK06504 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PRK08947 fadA 3-ketoacyl-CoA thiolase; Reviewed Back     alignment and domain information
>PRK06365 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PRK09268 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>TIGR02445 fadA fatty oxidation complex, beta subunit FadA Back     alignment and domain information
>PF07451 SpoVAD: Stage V sporulation protein AD (SpoVAD); InterPro: IPR010894 This family contains the bacterial stage V sporulation protein AD (SpoVAD), which is approximately 340 residues long Back     alignment and domain information
>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA Back     alignment and domain information
>KOG1389 consensus 3-oxoacyl CoA thiolase [Lipid transport and metabolism] Back     alignment and domain information
>PRK08142 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>COG0304 FabB 3-oxoacyl-(acyl-carrier-protein) synthase [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>PRK07855 lipid-transfer protein; Provisional Back     alignment and domain information
>PRK06066 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>COG0183 PaaJ Acetyl-CoA acetyltransferase [Lipid metabolism] Back     alignment and domain information
>KOG1406 consensus Peroxisomal 3-ketoacyl-CoA-thiolase P-44/SCP2 [Lipid transport and metabolism] Back     alignment and domain information
>KOG1390 consensus Acetyl-CoA acetyltransferase [Lipid transport and metabolism] Back     alignment and domain information
>COG3321 Polyketide synthase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>PRK07937 lipid-transfer protein; Provisional Back     alignment and domain information
>KOG1394 consensus 3-oxoacyl-(acyl-carrier-protein) synthase (I and II) [Lipid transport and metabolism; Secondary metabolites biosynthesis, transport and catabolism] Back     alignment and domain information
>KOG1391 consensus Acetyl-CoA acetyltransferase [Lipid transport and metabolism] Back     alignment and domain information
>PF08540 HMG_CoA_synt_C: Hydroxymethylglutaryl-coenzyme A synthase C terminal; InterPro: IPR013746 Synonym(s): 3-hydroxy-3-methylglutaryl-coenzyme A synthase, HMG-CoA synthase Back     alignment and domain information
>KOG1392 consensus Acetyl-CoA acetyltransferase [Lipid transport and metabolism] Back     alignment and domain information
>PF08541 ACP_syn_III_C: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ; InterPro: IPR013747 This domain is found on 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 2 Back     alignment and domain information
>PF13723 Ketoacyl-synt_2: Beta-ketoacyl synthase, N-terminal domain Back     alignment and domain information
>PRK06816 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed Back     alignment and domain information
>TIGR00748 HMG_CoA_syn_Arc hydroxymethylglutaryl-CoA synthase, putative Back     alignment and domain information
>PRK07204 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed Back     alignment and domain information
>CHL00203 fabH 3-oxoacyl-acyl-carrier-protein synthase 3; Provisional Back     alignment and domain information
>PRK05963 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed Back     alignment and domain information
>PRK09258 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed Back     alignment and domain information
>PRK12879 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed Back     alignment and domain information
>PRK06025 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PLN02326 3-oxoacyl-[acyl-carrier-protein] synthase III Back     alignment and domain information
>PRK06954 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PRK08242 acetyl-CoA acetyltransferase; Validated Back     alignment and domain information
>PRK08235 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>cd00830 KAS_III Ketoacyl-acyl carrier protein synthase III (KASIII) initiates the elongation in type II fatty acid synthase systems Back     alignment and domain information
>PRK06840 hypothetical protein; Validated Back     alignment and domain information
>PRK07108 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PRK04262 hypothetical protein; Provisional Back     alignment and domain information
>TIGR00747 fabH 3-oxoacyl-(acyl-carrier-protein) synthase III Back     alignment and domain information
>PRK07851 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PRK09052 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PRK09352 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed Back     alignment and domain information
>COG0332 FabH 3-oxoacyl-[acyl-carrier-protein] Back     alignment and domain information
>PRK13359 beta-ketoadipyl CoA thiolase; Provisional Back     alignment and domain information
>PRK06504 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>TIGR02430 pcaF beta-ketoadipyl CoA thiolase Back     alignment and domain information
>PRK06205 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>COG3425 PksG 3-hydroxy-3-methylglutaryl CoA synthase [Lipid metabolism] Back     alignment and domain information
>PRK06633 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PRK07515 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed Back     alignment and domain information
>cd00825 decarbox_cond_enzymes decarboxylating condensing enzymes; Family of enzymes that catalyze the formation of a new carbon-carbon bond by a decarboxylating Claisen-like condensation reaction Back     alignment and domain information
>PF02803 Thiolase_C: Thiolase, C-terminal domain; InterPro: IPR020617 Two different types of thiolase [, , ] are found both in eukaryotes and in prokaryotes: acetoacetyl-CoA thiolase (2 Back     alignment and domain information
>PRK08963 fadI 3-ketoacyl-CoA thiolase; Reviewed Back     alignment and domain information
>PF02803 Thiolase_C: Thiolase, C-terminal domain; InterPro: IPR020617 Two different types of thiolase [, , ] are found both in eukaryotes and in prokaryotes: acetoacetyl-CoA thiolase (2 Back     alignment and domain information
>PRK06366 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PRK09050 beta-ketoadipyl CoA thiolase; Validated Back     alignment and domain information
>PRK06147 3-oxoacyl-(acyl carrier protein) synthase; Validated Back     alignment and domain information
>cd00831 CHS_like Chalcone and stilbene synthases; plant-specific polyketide synthases (PKS) and related enzymes, also called type III PKSs Back     alignment and domain information
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism] Back     alignment and domain information
>PRK07850 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>cd00327 cond_enzymes Condensing enzymes; Family of enzymes that catalyze a (decarboxylating or non-decarboxylating) Claisen-like condensation reaction Back     alignment and domain information
>PRK06690 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PRK12880 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed Back     alignment and domain information
>PRK08257 acetyl-CoA acetyltransferase; Validated Back     alignment and domain information
>cd00751 thiolase Thiolase are ubiquitous enzymes that catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine Back     alignment and domain information
>TIGR02445 fadA fatty oxidation complex, beta subunit FadA Back     alignment and domain information
>PRK08947 fadA 3-ketoacyl-CoA thiolase; Reviewed Back     alignment and domain information
>cd00827 init_cond_enzymes "initiating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type III and polyketide synthases, type III, which include chalcone synthase and related enzymes Back     alignment and domain information
>PRK06445 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PRK05656 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>COG1214 Inactive homolog of metal-dependent proteases, putative molecular chaperone [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PLN03169 chalcone synthase family protein; Provisional Back     alignment and domain information
>TIGR01835 HMG-CoA-S_prok 3-hydroxy-3-methylglutaryl CoA synthase, prokaryotic clade Back     alignment and domain information
>PRK05790 putative acyltransferase; Provisional Back     alignment and domain information
>cd00829 SCP-x_thiolase Thiolase domain associated with sterol carrier protein (SCP)-x isoform and related proteins; SCP-2 has multiple roles in intracellular lipid circulation and metabolism Back     alignment and domain information
>PRK08131 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PRK12578 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PRK09051 beta-ketothiolase; Provisional Back     alignment and domain information
>COG0533 QRI7 Metal-dependent proteases with possible chaperone activity [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query401
1u0m_A382 Crystal Structure Of 1,3,6,8-Tetrahydroxynaphthalen 1e-10
3tsy_A979 4-Coumaroyl-Coa Ligase::stilbene Synthase Fusion Pr 2e-10
3ale_A416 A Type Iii Polyketide Synthase That Produces Diaryl 1e-08
3oit_A387 Crystal Structure Of Curcuminoid Synthase Cus From 2e-08
1qlv_A402 Pyrone Synthase (Pys) From Gerbera Hybrida Length = 2e-08
1z1e_A390 Crystal Structure Of Stilbene Synthase From Arachis 4e-08
1u0v_A393 An Aldol Switch Discovered In Stilbene Synthases Me 7e-08
3awj_A402 Crystal Structure Of The Huperzia Serrata Polyketid 1e-07
1cgz_A389 Chalcone Synthase From Alfalfa Complexed With Resve 5e-07
1i88_A389 Chalcone Synthase (G256v) Length = 389 2e-06
1i89_A389 Chalcone Synthase (G256l) Length = 389 2e-06
1tee_A393 Crystal Structure Of C205f Mutant Of Pks18 From Myc 3e-06
1i8b_A389 Chalcone Synthase (g256f) Length = 389 3e-06
1ted_A393 Crystal Structure Of A Type Iii Polyketide Synthase 4e-06
1i86_A389 Chalcone Synthase, G256a Mutant Length = 389 5e-06
1cml_A389 Chalcone Synthase From Alfalfa Complexed With Malon 6e-06
3a5s_A387 Benzalacetone Synthase (I207lL208F) Length = 387 8e-06
1chw_A389 Chalcone Synthase From Alfalfa Complexed With Hexan 9e-06
1bi5_A389 Chalcone Synthase From Alfalfa Length = 389 9e-06
3gwa_A365 1.6 Angstrom Crystal Structure Of 3-Oxoacyl-(Acyl-C 1e-05
1bq6_A388 Chalcone Synthase From Alfalfa With Coenzyme A Leng 1e-05
2d3m_A406 Pentaketide Chromone Synthase Complexed With Coenzy 1e-05
2d51_A406 Pentaketide Chromone Synthase (M207g Mutant) Length 1e-05
2h84_A374 Crystal Structure Of The C-terminal Type Iii Polyke 1e-05
3a5q_A387 Benzalacetone Synthase From Rheum Palmatum Length = 2e-05
1d6h_A387 Chalone Synthase (N336a Mutant Complexed With Coa) 8e-05
1d6i_A388 Chalcone Synthase (H303q Mutant) Length = 388 8e-05
1jwx_A389 Chalcone Synthase--F215s Mutant Length = 389 8e-05
3e1h_A465 Crystal Structure Of A Type Iii Polyketide Synthase 9e-05
1u0u_A397 An Aldol Switch Discovered In Stilbene Synthases Me 3e-04
1xes_A413 Crystal Structure Of Stilbene Synthase From Pinus S 4e-04
3euq_A379 X-Ray Structural Of A Type Iii Pentaketide Synthase 5e-04
2p0u_A413 Crystal Structure Of Marchantia Polymorpha Stilbene 7e-04
>pdb|1U0M|A Chain A, Crystal Structure Of 1,3,6,8-Tetrahydroxynaphthalene Synthase (Thns) From Streptomyces Coelicolor A3(2): A Bacterial Type Iii Polyketide Synthase (Pks) Provides Insights Into Enzymatic Control Of Reactive Polyketide Intermediates Length = 382 Back     alignment and structure 
Iteration: 1

 Score = 63.9 bits (154), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 72/318 (22%), Positives = 129/318 (40%), Gaps = 62/318 (19%)
Query: 77  ETEEVLCTIVKDLLSKHKINPKSIDILV-TNCSIFCPTPSISSMIINKFGFRSNIKSINL 135
           E +  +  +++  L   ++    ID+++  +C+ F   PS+++ +IN+ GF S  + I +
Sbjct: 83  EAKSRVPAVIQRALDDAELLATDIDVIIYVSCTGFM-MPSLTAWLINEMGFDSTTRQIPI 141
Query: 136 SGMGCSAGILSISLVKDLLKVHKNSLALVLSMEAIS-SNGYTGSTKSMLISNTVFRMGGA 194
           + +GC+AG  +I+   D    +  + AL+++ E  S     T      L+ N +F  G A
Sbjct: 142 AQLGCAAGGAAINRAHDFCTAYPEANALIVACEFCSLCYQPTDLGVGSLLCNGLFGDGIA 201
Query: 195 AILLSNRQQDKHIAKYKLKHLVRTHMGYDDQAYSSVFQQQDKDGNVGVSISRS---LLPV 251
           A ++  R                                    G  GV + R+   L+P 
Sbjct: 202 AAVVRGR------------------------------------GGTGVRLERNGSYLIPK 225
Query: 252 AARALRINISQLGPHVLPYSEQLKYLWSVVCKKSKTYVPNFKK-AFEH---------FCI 301
               +  ++   G H L        L   V    +   P  K+ A EH         + +
Sbjct: 226 TEDWIMYDVKATGFHFL--------LDKRVPATMEPLAPALKELAGEHGWDASDLDFYIV 277
Query: 302 HAGGRAIIDAVEENLKLSKEDGEASRMTLYRFGNTSSSSYWYELCYLEAKGKVKKGDRVW 361
           HAGG  I+D +   L++       SR TL  +GN +S+     L  L  +G V++G R  
Sbjct: 278 HAGGPRILDDLSTFLEVDPHAFRFSRATLTEYGNIASAVVLDALRRLFDEGGVEEGARGL 337
Query: 362 QIAFGSGF--KVNSAVWK 377
              FG G   +++   W+
Sbjct: 338 LAGFGPGITAEMSLGCWQ 355
>pdb|3TSY|A Chain A, 4-Coumaroyl-Coa Ligase::stilbene Synthase Fusion Protein Length = 979 Back     alignment and structure
>pdb|3ALE|A Chain A, A Type Iii Polyketide Synthase That Produces Diarylheptanoid Length = 416 Back     alignment and structure
>pdb|3OIT|A Chain A, Crystal Structure Of Curcuminoid Synthase Cus From Oryza Sativa Length = 387 Back     alignment and structure
>pdb|1QLV|A Chain A, Pyrone Synthase (Pys) From Gerbera Hybrida Length = 402 Back     alignment and structure
>pdb|1Z1E|A Chain A, Crystal Structure Of Stilbene Synthase From Arachis Hypogaea Length = 390 Back     alignment and structure
>pdb|1U0V|A Chain A, An Aldol Switch Discovered In Stilbene Synthases Mediates Cyclization Of Specificity Of Type Iii Polyketide Synthases: 18xchs Structure Length = 393 Back     alignment and structure
>pdb|3AWJ|A Chain A, Crystal Structure Of The Huperzia Serrata Polyketide Synthase 1 Complexed With Coa-Sh Length = 402 Back     alignment and structure
>pdb|1CGZ|A Chain A, Chalcone Synthase From Alfalfa Complexed With Resveratrol Length = 389 Back     alignment and structure
>pdb|1I88|A Chain A, Chalcone Synthase (G256v) Length = 389 Back     alignment and structure
>pdb|1I89|A Chain A, Chalcone Synthase (G256l) Length = 389 Back     alignment and structure
>pdb|1TEE|A Chain A, Crystal Structure Of C205f Mutant Of Pks18 From Mycobacterium Tuberculosis Length = 393 Back     alignment and structure
>pdb|1I8B|A Chain A, Chalcone Synthase (g256f) Length = 389 Back     alignment and structure
>pdb|1TED|A Chain A, Crystal Structure Of A Type Iii Polyketide Synthase Pks18 From Mycobacterium Tuberculosis Length = 393 Back     alignment and structure
>pdb|1I86|A Chain A, Chalcone Synthase, G256a Mutant Length = 389 Back     alignment and structure
>pdb|1CML|A Chain A, Chalcone Synthase From Alfalfa Complexed With Malonyl-Coa Length = 389 Back     alignment and structure
>pdb|3A5S|A Chain A, Benzalacetone Synthase (I207lL208F) Length = 387 Back     alignment and structure
>pdb|1CHW|A Chain A, Chalcone Synthase From Alfalfa Complexed With Hexanoyl-Coa Length = 389 Back     alignment and structure
>pdb|1BI5|A Chain A, Chalcone Synthase From Alfalfa Length = 389 Back     alignment and structure
>pdb|3GWA|A Chain A, 1.6 Angstrom Crystal Structure Of 3-Oxoacyl-(Acyl-Carrier-Protein) Synthase Iii Length = 365 Back     alignment and structure
>pdb|1BQ6|A Chain A, Chalcone Synthase From Alfalfa With Coenzyme A Length = 388 Back     alignment and structure
>pdb|2D3M|A Chain A, Pentaketide Chromone Synthase Complexed With Coenzyme A Length = 406 Back     alignment and structure
>pdb|2D51|A Chain A, Pentaketide Chromone Synthase (M207g Mutant) Length = 406 Back     alignment and structure
>pdb|2H84|A Chain A, Crystal Structure Of The C-terminal Type Iii Polyketide Synthase (pks Iii) Domain Of 'steely1' (a Type I/iii Pks Hybrid From Dictyostelium) Length = 374 Back     alignment and structure
>pdb|3A5Q|A Chain A, Benzalacetone Synthase From Rheum Palmatum Length = 387 Back     alignment and structure
>pdb|1D6H|A Chain A, Chalone Synthase (N336a Mutant Complexed With Coa) Length = 387 Back     alignment and structure
>pdb|1D6I|A Chain A, Chalcone Synthase (H303q Mutant) Length = 388 Back     alignment and structure
>pdb|1JWX|A Chain A, Chalcone Synthase--F215s Mutant Length = 389 Back     alignment and structure
>pdb|3E1H|A Chain A, Crystal Structure Of A Type Iii Polyketide Synthase Pksiiinc From Neurospora Crassa Length = 465 Back     alignment and structure
>pdb|1U0U|A Chain A, An Aldol Switch Discovered In Stilbene Synthases Mediates Cyclization Specificity Of Type Iii Polyketide Synthases: Pine Stilbene Synthase Structure Length = 397 Back     alignment and structure
>pdb|1XES|A Chain A, Crystal Structure Of Stilbene Synthase From Pinus Sylvestris Length = 413 Back     alignment and structure
>pdb|3EUQ|A Chain A, X-Ray Structural Of A Type Iii Pentaketide Synthase From Neurospora Crassa Length = 379 Back     alignment and structure
>pdb|2P0U|A Chain A, Crystal Structure Of Marchantia Polymorpha Stilbenecarboxylate Synthase 2 (Stcs2) Length = 413 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query401
2h84_A374 Steely1; thiolase-fold, type III polyketide syntha 2e-97
3oit_A387 OS07G0271500 protein; type III polyketide synthase 8e-92
3a5r_A387 Benzalacetone synthase; chalcone synthase, type II 6e-68
3awk_A402 Chalcone synthase-like polyketide synthase; type I 2e-67
1i88_A389 CHS2, chalcone synthase 2; polyketide synthase, tr 3e-62
3v7i_A413 Putative polyketide synthase; type III polyketide 1e-58
2d3m_A406 Pentaketide chromone synthase; chalcone synthase, 7e-57
2p0u_A413 Stilbenecarboxylate synthase 2; polyketide synthas 6e-53
1xes_A413 Dihydropinosylvin synthase; native structure, tran 5e-52
3e1h_A465 PKSIIINC, putative uncharacterized protein; resorc 3e-50
3euo_A379 Type III pentaketide synthase; alpha helix, acyltr 3e-49
1ee0_A402 2-pyrone synthase; polyketide synthase, thiolase f 5e-41
1u0m_A382 Putative polyketide synthase; type III polyketide 3e-36
1ted_A393 PKS18; thiolase fold, substrate binding tunnel, tr 1e-34
3ov2_A393 Curcumin synthase; type III polyketide synthase, t 7e-28
1xpm_A396 3-hydroxy-3-methylglutaryl COA synthase; HMG-COA s 4e-10
3s3l_A357 CERJ; acyltransferase, FABH homologue, KS III homo 3e-09
3tsy_A979 Fusion protein 4-coumarate--COA ligase 1, resvera 1e-08
3h78_A359 PQS biosynthetic enzyme; PQSD, anthranilic acid, a 2e-08
1mzj_A339 Beta-ketoacylsynthase III; beta-ketosynthase, arom 5e-08
2ebd_A309 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, 7e-08
3sqz_A425 Putative hydroxymethylglutaryl-COA synthase; thiol 7e-08
3s21_A345 3-oxoacyl-[ACP] synthase III; non-decarboxylative 8e-08
2x3e_A331 3-oxoacyl-[acyl-carrier-protein] synthase 3; HED, 9e-08
1ub7_A322 3-oxoacyl-[acyl-carrier protein] synthase; fatty a 1e-07
1zow_A313 3-oxoacyl-[acyl-carrier-protein] synthase III; FAB 1e-07
1hnj_A317 Beta-ketoacyl-acyl carrier protein synthase III; F 1e-07
3gwa_A365 3-oxoacyl-(acyl-carrier-protein) synthase III; str 2e-07
3il3_A323 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, 3e-07
4dfe_A333 3-oxoacyl-[acyl-carrier-protein] synthase 3; ssgci 3e-07
1u6e_A335 3-oxoacyl-[acyl-carrier-protein] synthase III; tra 3e-07
4efi_A354 3-oxoacyl-(acyl-carrier protein) synthase; structu 4e-07
3led_A392 3-oxoacyl-acyl carrier protein synthase III; struc 6e-07
3il6_A321 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, 4e-06
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 8e-06
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 6e-04
2p8u_A478 Hydroxymethylglutaryl-COA synthase, cytoplasmic; h 4e-05
3v4n_A388 HMG-COA synthase; hydroxymethylglutaryl-COA syntha 5e-05
>2h84_A Steely1; thiolase-fold, type III polyketide synthase, PKS, chalcone-S synthase superfamily, type I PKS; HET: P6G; 2.90A {Dictyostelium discoideum} Length = 374 Back     alignment and structure
 Score =  294 bits (755), Expect = 2e-97
 Identities = 55/371 (14%), Positives = 130/371 (35%), Gaps = 34/371 (9%)

Query: 19  RVPFSHFVEHFTTSNVFDKESLDFQEKVLEKSGI-----GDESCIPLNLHEMQPDVSL-- 71
            +      +  +       E+ +  +++ E+S I       +   P N  + +   ++  
Sbjct: 27  PISQQSLKDSISNDFSDKAETNEKVKRIFEQSQIKTRHLVRDYTKPENSIKFRHLETITD 86

Query: 72  --KRSREETEEVLCTIVKDLLSKHKINPKSIDILVTNCSIFCPTPSISSMIINKFGFRSN 129
              + ++   ++        L     +   I  +V+  S     P ++  +I+  G   +
Sbjct: 87  VNNQFKKVVPDLAQQACLRALKDWGGDKGDITHIVSVTSTGIIIPDVNFKLIDLLGLNKD 146

Query: 130 IKSINLSGMGCSAGILSISLVKDLLKVHKNSLALVLSMEAISSNGYTGSTKSMLISNTVF 189
           ++ ++L+ MGC AG+ S+     L K    +  LV+  E  S +         ++++++F
Sbjct: 147 VERVSLNLMGCLAGLSSLRTAASLAKASPRNRILVVCTEVCSLHFSNTDGGDQMVASSIF 206

Query: 190 RMGGAAILLSNRQQDKHIAKYKLKHLVRTHMGYDDQAYSSVFQQQDKDGNVGVSISRSLL 249
             G AA ++    + +    Y++   +       + A         +     + +  S+ 
Sbjct: 207 ADGSAAYIIGCNPRIEETPLYEVMCSINRSFPNTENAMV----WDLEKEGWNLGLDASIP 262

Query: 250 PVAARALRINISQ-LGPHVLPYSEQLKYLWSVVCKKSKTYVPNFKKAFEHFCIHAGGRAI 308
            V    +   +   L    L                +     +       F IH GG++I
Sbjct: 263 IVIGSGIEAFVDTLLDKAKLQ-------------TSTAISAKDC-----EFLIHTGGKSI 304

Query: 309 IDAVEENLKLSKEDGEASRMTLYRFGNTSSSSYWYELCYLEAKGKVKKGDRVWQIAFGSG 368
           +  +E +L +  +  + +    + +GN SS+S  + + +               +AFG G
Sbjct: 305 LMNIENSLGIDPKQTKNTWDVYHAYGNMSSASVIFVMDHARKSK--SLPTYSISLAFGPG 362

Query: 369 FKVNSAVWKCV 379
                   K V
Sbjct: 363 LAFEGCFLKNV 373
>3oit_A OS07G0271500 protein; type III polyketide synthases, transferase; 2.00A {Oryza sativa} PDB: 3ale_A Length = 387 Back     alignment and structure
>3a5r_A Benzalacetone synthase; chalcone synthase, type III polyketide synthase, transferase, acyltransferase; HET: HC4; 1.60A {Rheum palmatum} PDB: 3a5q_A* 3a5s_A Length = 387 Back     alignment and structure
>3v7i_A Putative polyketide synthase; type III polyketide synthase, acyltransferase, transferase,; 2.90A {Streptomyces coelicolor} Length = 413 Back     alignment and structure
>1xes_A Dihydropinosylvin synthase; native structure, transferase; HET: 3IO; 1.70A {Pinus sylvestris} PDB: 1xet_A* 1u0u_A Length = 413 Back     alignment and structure
>3e1h_A PKSIIINC, putative uncharacterized protein; resorcinolic lipid synthase, type III PKS, acyltransferase, transferase; 2.58A {Neurospora crassa} Length = 465 Back     alignment and structure
>1u0m_A Putative polyketide synthase; type III polyketide synthase, PKS, bacterial, thiolase fold, beta-alpha-beta-alpha fold, catalytic triad; HET: 15P; 2.22A {Streptomyces coelicolor} SCOP: c.95.1.2 c.95.1.2 Length = 382 Back     alignment and structure
>1ted_A PKS18; thiolase fold, substrate binding tunnel, transferase; HET: MYR; 2.25A {Mycobacterium tuberculosis} SCOP: c.95.1.2 PDB: 1tee_A Length = 393 Back     alignment and structure
>3ov2_A Curcumin synthase; type III polyketide synthase, transferase; 2.32A {Curcuma longa} PDB: 3ov3_A Length = 393 Back     alignment and structure
>1xpm_A 3-hydroxy-3-methylglutaryl COA synthase; HMG-COA synthase, HMGS, coenzyme A, thiolase fold, condensing enzyme; HET: HMG CAA; 1.60A {Staphylococcus aureus subsp} SCOP: c.95.1.2 c.95.1.2 PDB: 1xpl_A* 1xpk_A* 1tvz_A 1txt_A* Length = 396 Back     alignment and structure
>3s3l_A CERJ; acyltransferase, FABH homologue, KS III homologue, dimethyl transfer, transferase; 2.00A {Streptomyces tendae} PDB: 3t5y_A* 3t6s_A* 3t8e_A 3t5y_B* Length = 357 Back     alignment and structure
>3tsy_A Fusion protein 4-coumarate--COA ligase 1, resvera synthase; transferase; 3.10A {Arabidospis thaliana} Length = 979 Back     alignment and structure
>3h78_A PQS biosynthetic enzyme; PQSD, anthranilic acid, anthraniloyl-COA, transferase; HET: BE2; 1.70A {Pseudomonas aeruginosa PAO1} PDB: 3h76_A 3h77_A* Length = 359 Back     alignment and structure
>1mzj_A Beta-ketoacylsynthase III; beta-ketosynthase, aromatic polyketide, biosynthetic engineering, catalytic triad, transferase; HET: COA; 2.10A {Streptomyces SP} SCOP: c.95.1.2 c.95.1.2 Length = 339 Back     alignment and structure
>2ebd_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, aquifex VF5, lipid metabolism, structural genomics; 2.10A {Aquifex aeolicus} Length = 309 Back     alignment and structure
>3s21_A 3-oxoacyl-[ACP] synthase III; non-decarboxylative claisen condensation reaction, transfera; HET: CER; 1.70A {Xanthomonas campestris PV} PDB: 3s23_A* 3row_A 3s1z_A 3s20_A* 3fk5_A Length = 345 Back     alignment and structure
>2x3e_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; HED, transferase, acyltransferase, lipid synthesis, multifun enzyme; 1.81A {Pseudomonas aeruginosa} Length = 331 Back     alignment and structure
>1ub7_A 3-oxoacyl-[acyl-carrier protein] synthase; fatty acid synthesis, beta-ketoacyl-ACP synthase III, FABH; 2.30A {Thermus thermophilus} SCOP: c.95.1.2 c.95.1.2 Length = 322 Back     alignment and structure
>1zow_A 3-oxoacyl-[acyl-carrier-protein] synthase III; FABH, fatty acid biosynthesis, transferase; 2.00A {Staphylococcus aureus subsp} PDB: 3il7_A Length = 313 Back     alignment and structure
>1hnj_A Beta-ketoacyl-acyl carrier protein synthase III; FABH, transferase; HET: MLC; 1.46A {Escherichia coli} SCOP: c.95.1.2 c.95.1.2 PDB: 1hn9_A* 1hnh_A* 1hnd_A* 1hnk_A 1mzs_A* 2eft_A* 2gyo_A* 3il9_A 1ebl_A* Length = 317 Back     alignment and structure
>3gwa_A 3-oxoacyl-(acyl-carrier-protein) synthase III; structural genomics, synthetase; 1.60A {Burkholderia pseudomallei} PDB: 3gwe_A Length = 365 Back     alignment and structure
>3il3_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, fatty acid biosynthesis, antibiotic, acyltransferase, cytoplasm, lipid synthesis; 2.70A {Haemophilus influenzae} Length = 323 Back     alignment and structure
>4dfe_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; ssgcid, seattle structural genomics center for infectious DI transferase; 2.35A {Burkholderia xenovorans} Length = 333 Back     alignment and structure
>1u6e_A 3-oxoacyl-[acyl-carrier-protein] synthase III; transferase; 1.85A {Mycobacterium tuberculosis} SCOP: c.95.1.2 c.95.1.2 PDB: 1u6s_A* 1m1m_A 1hzp_A* 2qnx_A* 2qnz_A* 2qo1_A* 2qx1_A* 2qo0_A* 2qny_A* 2ahb_A 2aj9_A Length = 335 Back     alignment and structure
>4efi_A 3-oxoacyl-(acyl-carrier protein) synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.35A {Burkholderia xenovorans} Length = 354 Back     alignment and structure
>3led_A 3-oxoacyl-acyl carrier protein synthase III; structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.45A {Rhodopseudomonas palustris} Length = 392 Back     alignment and structure
>3il6_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, fatty acid biosynthesis, antibiotic, acyltransferase, cytoplasm, lipid synthesis; HET: B83; 2.50A {Enterococcus faecalis} PDB: 3il5_A* 3il4_A* Length = 321 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>2p8u_A Hydroxymethylglutaryl-COA synthase, cytoplasmic; hydromethylglutaryl COA, mevalonate pathway, structural GENO structural genomics consortium, SGC; HET: COA; 2.00A {Homo sapiens} Length = 478 Back     alignment and structure
>3v4n_A HMG-COA synthase; hydroxymethylglutaryl-COA synthase, nitrosylation, transfera inhibitor complex; HET: BTB; 1.60A {Enterococcus faecalis} PDB: 3v4x_A* 1x9e_A 1ysl_B* 1ysl_A* 2hdb_A* Length = 388 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query401
4ewp_A350 3-oxoacyl-[acyl-carrier-protein] synthase 3; trans 100.0
3e1h_A465 PKSIIINC, putative uncharacterized protein; resorc 100.0
3gwa_A365 3-oxoacyl-(acyl-carrier-protein) synthase III; str 100.0
3il6_A321 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, 100.0
3euo_A379 Type III pentaketide synthase; alpha helix, acyltr 100.0
4efi_A354 3-oxoacyl-(acyl-carrier protein) synthase; structu 100.0
3il3_A323 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, 100.0
3ov2_A393 Curcumin synthase; type III polyketide synthase, t 100.0
3oit_A387 OS07G0271500 protein; type III polyketide synthase 100.0
4dfe_A333 3-oxoacyl-[acyl-carrier-protein] synthase 3; ssgci 100.0
3v7i_A413 Putative polyketide synthase; type III polyketide 100.0
3h78_A359 PQS biosynthetic enzyme; PQSD, anthranilic acid, a 100.0
3led_A392 3-oxoacyl-acyl carrier protein synthase III; struc 100.0
3s21_A345 3-oxoacyl-[ACP] synthase III; non-decarboxylative 100.0
3s3l_A357 CERJ; acyltransferase, FABH homologue, KS III homo 100.0
2h84_A374 Steely1; thiolase-fold, type III polyketide syntha 100.0
1ted_A393 PKS18; thiolase fold, substrate binding tunnel, tr 100.0
1i88_A389 CHS2, chalcone synthase 2; polyketide synthase, tr 100.0
3awk_A402 Chalcone synthase-like polyketide synthase; type I 100.0
3a5r_A387 Benzalacetone synthase; chalcone synthase, type II 100.0
2p0u_A413 Stilbenecarboxylate synthase 2; polyketide synthas 100.0
1xes_A413 Dihydropinosylvin synthase; native structure, tran 100.0
1u0m_A382 Putative polyketide synthase; type III polyketide 100.0
1ee0_A402 2-pyrone synthase; polyketide synthase, thiolase f 100.0
2d3m_A406 Pentaketide chromone synthase; chalcone synthase, 100.0
2x3e_A331 3-oxoacyl-[acyl-carrier-protein] synthase 3; HED, 100.0
1mzj_A339 Beta-ketoacylsynthase III; beta-ketosynthase, arom 100.0
1hnj_A317 Beta-ketoacyl-acyl carrier protein synthase III; F 100.0
3v4n_A388 HMG-COA synthase; hydroxymethylglutaryl-COA syntha 100.0
1zow_A313 3-oxoacyl-[acyl-carrier-protein] synthase III; FAB 100.0
3sqz_A425 Putative hydroxymethylglutaryl-COA synthase; thiol 100.0
2v4w_A460 Hydroxymethylglutaryl-COA synthase, mitochondrial; 100.0
2ebd_A309 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, 100.0
1ub7_A322 3-oxoacyl-[acyl-carrier protein] synthase; fatty a 100.0
1u6e_A335 3-oxoacyl-[acyl-carrier-protein] synthase III; tra 100.0
3tsy_A979 Fusion protein 4-coumarate--COA ligase 1, resvera 100.0
1xpm_A396 3-hydroxy-3-methylglutaryl COA synthase; HMG-COA s 100.0
2p8u_A478 Hydroxymethylglutaryl-COA synthase, cytoplasmic; h 100.0
2f82_A450 HMG-COA synthase; HMGS1, transferase; 2.10A {Brass 100.0
2wya_A460 Hydroxymethylglutaryl-COA synthase, mitochondrial; 100.0
3lma_A347 Stage V sporulation protein AD (spovad); NESG, str 99.92
4e1l_A395 Acetoacetyl-COA thiolase 2; 3-layer(ABA) sandwich, 99.82
3ss6_A394 Acetyl-COA acetyltransferase; structural genomics, 99.81
4dd5_A396 Acetyl-COA acetyltransferase; structural genomics, 99.8
3ho9_A427 3-oxoacyl-[acyl-carrier-protein] synthase 2; FABF, 99.77
1tqy_A424 Beta-ketoacyl synthase/acyl transferase; alpha-bet 99.76
3o04_A413 LMO2201 protein, beta-keto-acyl carrier protein sy 99.76
2gqd_A437 3-oxoacyl-[acyl-carrier-protein] synthase 2; dupli 99.76
1j3n_A408 3-oxoacyl-(acyl-carrier protein) synthase II; cond 99.75
3kzu_A428 3-oxoacyl-(acyl-carrier-protein) synthase II; seat 99.74
3svk_A407 Acetyl-COA acetyltransferase; ssgcid, NIH, niaid, 99.74
1e5m_A416 KAS II, beta ketoacyl acyl carrier protein synthas 99.73
3goa_A387 3-ketoacyl-COA thiolase; metabolism, fatty acid, p 99.72
2iik_A418 3-ketoacyl-COA thiolase, peroxisomal; fatty acid m 99.7
1ox0_A430 Beta ketoacyl-acyl carrier protein synthase; trans 99.69
4ewg_A412 Beta-ketoacyl synthase; ssgcid, structural genomic 99.69
4ddo_A451 3-oxoacyl-[acyl-carrier-protein] synthase 2; ssgci 99.69
2vu1_A392 Acetyl-COA acetyltransferase; acyltransferase, PHB 99.69
2gp6_A434 3-oxoacyl-[acyl-carrier-protein] synthase 2; thiol 99.68
1wl4_A397 Acetyl-coenzyme A acetyltransferase 2; thiolase fo 99.68
1ulq_A401 Putative acetyl-COA acetyltransferase; structural 99.68
1tqy_B415 Actinorhodin polyketide putative beta-ketoacyl SY; 99.66
2ib8_A395 Acetyl-COA acetyltransferase; thiolase fold, potas 99.64
1wdk_C390 3-ketoacyl-COA thiolase; alpha2BETA2 heterotetrame 99.63
3mqd_A428 Beta-ketoacyl synthase; ssgcid, ALS collaborative 99.63
2iwz_A438 3-oxoacyl-[acyl-carrier-protein] synthase; mitocho 99.62
2vba_A406 3-oxoacyl-[acyl-carrier-protein] synthase 1; cytop 99.62
1afw_A393 3-ketoacetyl-COA thiolase; fatty acid metabolism; 99.61
2wu9_A442 3-ketoacyl-COA thiolase 2, peroxisomal; cysteine o 99.6
2ix4_A431 3-oxoacyl-[acyl-carrier-protein] synthase; beta-ke 99.6
2wge_A416 3-oxoacyl-[acyl-carrier-protein] synthase 1; beta 99.58
2qo3_A 915 Eryaii erythromycin polyketide synthase modules 3; 99.56
3hhd_A 965 Fatty acid synthase; transferase, multienzyme, meg 99.5
2hg4_A 917 DEBS, 6-deoxyerythronolide B synthase; ketosynthas 99.42
4egv_A 520 Acetyl-COA acetyltransferase; NEW SUB-family, thio 99.21
3zen_D3089 Fatty acid synthase; transferase, mycolic acid bio 99.01
2vz8_A 2512 Fatty acid synthase; transferase, phosphopantethei 98.76
2pff_A 1688 Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl 98.19
2uv8_A 1887 Fatty acid synthase subunit alpha (FAS2); fatty ac 97.84
2uv9_A 1878 Fatty acid synthase alpha subunits; fungal, dehydr 97.78
3gwa_A365 3-oxoacyl-(acyl-carrier-protein) synthase III; str 94.54
4dfe_A333 3-oxoacyl-[acyl-carrier-protein] synthase 3; ssgci 94.49
3s3l_A357 CERJ; acyltransferase, FABH homologue, KS III homo 94.43
3il3_A323 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, 94.42
4ewp_A350 3-oxoacyl-[acyl-carrier-protein] synthase 3; trans 94.36
1mzj_A339 Beta-ketoacylsynthase III; beta-ketosynthase, arom 94.35
2x3e_A331 3-oxoacyl-[acyl-carrier-protein] synthase 3; HED, 94.33
3h78_A359 PQS biosynthetic enzyme; PQSD, anthranilic acid, a 94.24
3lma_A347 Stage V sporulation protein AD (spovad); NESG, str 94.18
3s21_A345 3-oxoacyl-[ACP] synthase III; non-decarboxylative 94.06
4efi_A354 3-oxoacyl-(acyl-carrier protein) synthase; structu 93.94
1u6e_A335 3-oxoacyl-[acyl-carrier-protein] synthase III; tra 93.63
1hnj_A317 Beta-ketoacyl-acyl carrier protein synthase III; F 93.28
1zow_A313 3-oxoacyl-[acyl-carrier-protein] synthase III; FAB 93.24
2ebd_A309 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, 92.99
1ub7_A322 3-oxoacyl-[acyl-carrier protein] synthase; fatty a 92.62
1ted_A393 PKS18; thiolase fold, substrate binding tunnel, tr 91.88
4e1l_A395 Acetoacetyl-COA thiolase 2; 3-layer(ABA) sandwich, 91.36
1u0m_A382 Putative polyketide synthase; type III polyketide 91.17
1ulq_A401 Putative acetyl-COA acetyltransferase; structural 91.15
3svk_A407 Acetyl-COA acetyltransferase; ssgcid, NIH, niaid, 90.58
3ss6_A394 Acetyl-COA acetyltransferase; structural genomics, 90.08
3led_A392 3-oxoacyl-acyl carrier protein synthase III; struc 89.22
4dd5_A396 Acetyl-COA acetyltransferase; structural genomics, 88.95
1wl4_A397 Acetyl-coenzyme A acetyltransferase 2; thiolase fo 88.32
2vu1_A392 Acetyl-COA acetyltransferase; acyltransferase, PHB 88.04
2h84_A374 Steely1; thiolase-fold, type III polyketide syntha 88.0
3goa_A387 3-ketoacyl-COA thiolase; metabolism, fatty acid, p 87.0
1wdk_C390 3-ketoacyl-COA thiolase; alpha2BETA2 heterotetrame 86.78
3tsy_A979 Fusion protein 4-coumarate--COA ligase 1, resvera 86.78
4egv_A520 Acetyl-COA acetyltransferase; NEW SUB-family, thio 85.86
2d3m_A406 Pentaketide chromone synthase; chalcone synthase, 85.2
1xpm_A396 3-hydroxy-3-methylglutaryl COA synthase; HMG-COA s 83.7
1xho_A148 Chorismate mutase; southeast collaboratory for str 82.87
2iik_A418 3-ketoacyl-COA thiolase, peroxisomal; fatty acid m 82.33
>4ewp_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; transferase; 2.20A {Micrococcus luteus nctc 2665} Back     alignment and structure
Probab=100.00  E-value=1.2e-58  Score=453.19  Aligned_cols=321  Identities=16%  Similarity=0.231  Sum_probs=258.2

Q ss_pred             ceEEEeeeeecCCCCCccCHHHHHHHHHhcCCCChhhHHHHHHHHHHcCCCCceecCCCccCCCCCCChHHHHHHHHHHH
Q 044359            3 GVYLVDFTCYHPADSLRVPFSHFVEHFTTSNVFDKESLDFQEKVLEKSGIGDESCIPLNLHEMQPDVSLKRSREETEEVL   82 (401)
Q Consensus         3 ~v~I~~~g~~lP~~~~~v~~~e~~~~~~~~~~~~~~~~~~~~~i~~~~GI~~R~~~~~~~~~~~~~~~l~~~~~~~~~la   82 (401)
                      ..+|.|+|+|+|+++  |+|+|+.+.++.    ++      +||.+++||++||++.+++              ++.+|+
T Consensus        13 ~srI~g~g~ylP~~~--v~n~el~~~~~~----~~------e~I~~rtGI~~R~~a~~~e--------------~~~~la   66 (350)
T 4ewp_A           13 ASRIVAVGAYRPANL--VPNEDLIGPIDS----SD------EWIRQRTGIVTRQRATAEE--------------TVPVMA   66 (350)
T ss_dssp             EEEEEEEEEECCSCE--EEHHHHTTTTTC----CH------HHHHHHHCCSEEECCCSSC--------------CHHHHH
T ss_pred             CCEEEEEEEEcCCCe--EcHHHHHHHhCC----CH------HHHHhccCceEEEEcCCCC--------------CHHHHH
Confidence            468999999999997  999999876532    22      6899999999999987643              267999


Q ss_pred             HHHHHHHHHhCCCCcCCcCEEEEee-ecCCCCCcHHHHHHHHcCCCCCcceEEeecccchhHHHHHHHHHHHHHcCCCCe
Q 044359           83 CTIVKDLLSKHKINPKSIDILVTNC-SIFCPTPSISSMIINKFGFRSNIKSINLSGMGCSAGILSISLVKDLLKVHKNSL  161 (401)
Q Consensus        83 ~~Aa~~aL~~ag~~~~dId~li~~s-~~~~~~p~~a~~l~~~LGl~~~~~~~~i~~~gC~~~~~aL~~A~~~i~~g~~~~  161 (401)
                      ++|+++||+++|++|+|||+||++| ++++..|+.+++|+++||++ ++.+||++ +||+|++.||++|.+++++|+.++
T Consensus        67 ~~Aa~~aL~~ag~~~~dId~li~~t~t~~~~~P~~a~~v~~~LGl~-~~~a~di~-~~C~g~~~aL~~A~~~i~~g~~~~  144 (350)
T 4ewp_A           67 VGAAREALERAGLQGSDLDAVIVSTVTFPHATPSAAALVAHEIGAT-PAPAYDVS-AACAGYCYGVAQADALVRSGTARH  144 (350)
T ss_dssp             HHHHHHHHHHTTCCGGGCSEEEEECSCCSCSSSCHHHHHHHHTTCT-TSCEEEEE-CGGGHHHHHHHHHHHHHHTTSCSE
T ss_pred             HHHHHHHHHHcCCCHHHCCEEEEEeccCCCCCCchHHHHHHHhCCC-CceEEEee-cchhhHHHHHHHhhhhhhCCCccc
Confidence            9999999999999999999999997 56788999999999999998 67899999 599999999999999999999999


Q ss_pred             EEEEeeccccCCCCCCCCcchhhhhhcccccceEEEEecCCCCccccceEEeeeeeecccCCccccccccccccCCCCee
Q 044359          162 ALVLSMEAISSNGYTGSTKSMLISNTVFRMGGAAILLSNRQQDKHIAKYKLKHLVRTHMGYDDQAYSSVFQQQDKDGNVG  241 (401)
Q Consensus       162 vLvv~~e~~s~~~~~~~d~~~~i~~~lfGDGAaA~ll~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~~  241 (401)
                      ||||++|.+|..+++ .++.   +..+|||||+|+||++.+...         +....+.+|+..++.+..+...     
T Consensus       145 ~Lvv~~E~~s~~~d~-~~~~---~~~lfgDGA~A~vl~~~~~~~---------~~~~~~~sdg~~~~~~~~~~~~-----  206 (350)
T 4ewp_A          145 VLVVGVERLSDVVDP-TDRS---ISFLLGDGAGAVIVAASDEPG---------ISPSVWGSDGERWSTISMTHSQ-----  206 (350)
T ss_dssp             EEEEEEEEGGGGCCT-TCTT---TGGGBCEEEEEEEEEEESSCC---------BCCCEEEECGGGTTSEEESSCH-----
T ss_pred             eeEeeeeeceecccc-cccc---cccccccchheeeeecccCCC---------ccceeeeecccccceeeecCCc-----
Confidence            999999999998877 5666   678999999999999876541         2233444565555433322110     


Q ss_pred             eEeccCchHHHHHHHHHHHH----------hhCCCCCchhHHHHHHHHHHhhhc------cCCCcchhhhcceEeecCCC
Q 044359          242 VSISRSLLPVAARALRINIS----------QLGPHVLPYSEQLKYLWSVVCKKS------KTYVPNFKKAFEHFCIHAGG  305 (401)
Q Consensus       242 ~~l~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~l------~~l~~~~~~did~~i~Hq~~  305 (401)
                      .    ..+... ...+....          ....+.|++.++|+++++.+++.+      +++.   ++|||+|++||+|
T Consensus       207 ~----~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~a~~~~~~~i~~~L~~~gl~---~~did~~v~Hq~~  278 (350)
T 4ewp_A          207 L----ELRDAV-EHARTTGDASAITGAEGMLWPTLRQDGPSVFRWAVWSMAKVAREALDAAGVE---PEDLAAFIPHQAN  278 (350)
T ss_dssp             H----HHHHHH-HHHHHHSCCTTTTTCSSCSSCCEEECHHHHHHHHHHTHHHHHHHHHHHHTCC---GGGEEEEEECCSC
T ss_pred             c----ccCccc-ccccccCCccccccccccccceeEehhHHHHHHHHHhhhHHHHHHHHhhcCC---hhHhceEEecCCC
Confidence            0    000000 00000000          001123556677777777666655      3565   7999999999999


Q ss_pred             hHHHHHHHHHcCCCchhhhhhHHHHhhhcCcccchHHHHHHHHHHcCCCCCCCeEEEEeeccchhhcceeeeee
Q 044359          306 RAIIDAVEENLKLSKEDGEASRMTLYRFGNTSSSSYWYELCYLEAKGKVKKGDRVWQIAFGSGFKVNSAVWKCV  379 (401)
Q Consensus       306 ~~~~~~~~~~lgi~~e~~~~s~~~~~~~Gn~~sasi~~~L~~~~~~g~l~~Gd~vll~~~G~G~s~~~~~l~~~  379 (401)
                      +++++.+++.||+|++|+.  +.++++||||+|||+|++|++++++|++++||+|+|++||+|++|++++|||.
T Consensus       279 ~~i~~~~~~~Lgl~~~~~~--~~~l~~~GNtssasi~~~L~~~~~~g~~~~Gd~vll~~fG~G~t~~~~vlr~P  350 (350)
T 4ewp_A          279 MRIIDEFAKQLKLPESVVV--ARDIADAGNTSAASIPLAMHRLLEENPELSGGLALQIGFGAGLVYGAQVVRLP  350 (350)
T ss_dssp             HHHHHHHHHHTTCCTTSEE--CCTHHHHCBCGGGHHHHHHHHHHHHCGGGTTSEEEEEEEETTTEEEEEEEECC
T ss_pred             HHHHHHHHHHcCcChHhEE--ecccccccchHHHHHHHHHHHHHHhCCCCCcCEEEEEEEchhhEeEEEEEEeC
Confidence            9999999999999999975  35899999999999999999999999999999999999999999999999984
>3e1h_A PKSIIINC, putative uncharacterized protein; resorcinolic lipid synthase, type III PKS, acyltransferase, transferase; 2.58A {Neurospora crassa} Back     alignment and structure
>3gwa_A 3-oxoacyl-(acyl-carrier-protein) synthase III; structural genomics, synthetase; 1.60A {Burkholderia pseudomallei} PDB: 3gwe_A Back     alignment and structure
>3il6_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, fatty acid biosynthesis, antibiotic, acyltransferase, cytoplasm, lipid synthesis; HET: B83; 2.50A {Enterococcus faecalis} PDB: 3il5_A* 3il4_A* Back     alignment and structure
>4efi_A 3-oxoacyl-(acyl-carrier protein) synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.35A {Burkholderia xenovorans} Back     alignment and structure
>3il3_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, fatty acid biosynthesis, antibiotic, acyltransferase, cytoplasm, lipid synthesis; 2.70A {Haemophilus influenzae} Back     alignment and structure
>3ov2_A Curcumin synthase; type III polyketide synthase, transferase; 2.32A {Curcuma longa} PDB: 3ov3_A Back     alignment and structure
>3oit_A OS07G0271500 protein; type III polyketide synthases, transferase; 2.00A {Oryza sativa} PDB: 3ale_A Back     alignment and structure
>4dfe_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; ssgcid, seattle structural genomics center for infectious DI transferase; 2.35A {Burkholderia xenovorans} Back     alignment and structure
>3v7i_A Putative polyketide synthase; type III polyketide synthase, acyltransferase, transferase,; 2.90A {Streptomyces coelicolor} Back     alignment and structure
>3h78_A PQS biosynthetic enzyme; PQSD, anthranilic acid, anthraniloyl-COA, transferase; HET: BE2; 1.70A {Pseudomonas aeruginosa PAO1} PDB: 3h76_A 3h77_A* Back     alignment and structure
>3led_A 3-oxoacyl-acyl carrier protein synthase III; structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.45A {Rhodopseudomonas palustris} Back     alignment and structure
>3s21_A 3-oxoacyl-[ACP] synthase III; non-decarboxylative claisen condensation reaction, transfera; HET: CER; 1.70A {Xanthomonas campestris PV} PDB: 3s23_A* 3row_A 3s1z_A 3s20_A* 3fk5_A Back     alignment and structure
>3s3l_A CERJ; acyltransferase, FABH homologue, KS III homologue, dimethyl transfer, transferase; 2.00A {Streptomyces tendae} PDB: 3t5y_A* 3t6s_A* 3t8e_A 3t5y_B* Back     alignment and structure
>2h84_A Steely1; thiolase-fold, type III polyketide synthase, PKS, chalcone-S synthase superfamily, type I PKS; HET: P6G; 2.90A {Dictyostelium discoideum} Back     alignment and structure
>1ted_A PKS18; thiolase fold, substrate binding tunnel, transferase; HET: MYR; 2.25A {Mycobacterium tuberculosis} SCOP: c.95.1.2 PDB: 1tee_A Back     alignment and structure
>3a5r_A Benzalacetone synthase; chalcone synthase, type III polyketide synthase, transferase, acyltransferase; HET: HC4; 1.60A {Rheum palmatum} PDB: 3a5q_A* 3a5s_A Back     alignment and structure
>1xes_A Dihydropinosylvin synthase; native structure, transferase; HET: 3IO; 1.70A {Pinus sylvestris} PDB: 1xet_A* 1u0u_A Back     alignment and structure
>1u0m_A Putative polyketide synthase; type III polyketide synthase, PKS, bacterial, thiolase fold, beta-alpha-beta-alpha fold, catalytic triad; HET: 15P; 2.22A {Streptomyces coelicolor} SCOP: c.95.1.2 c.95.1.2 Back     alignment and structure
>2x3e_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; HED, transferase, acyltransferase, lipid synthesis, multifun enzyme; 1.81A {Pseudomonas aeruginosa} Back     alignment and structure
>1mzj_A Beta-ketoacylsynthase III; beta-ketosynthase, aromatic polyketide, biosynthetic engineering, catalytic triad, transferase; HET: COA; 2.10A {Streptomyces SP} SCOP: c.95.1.2 c.95.1.2 Back     alignment and structure
>1hnj_A Beta-ketoacyl-acyl carrier protein synthase III; FABH, transferase; HET: MLC; 1.46A {Escherichia coli} SCOP: c.95.1.2 c.95.1.2 PDB: 1hn9_A* 1hnh_A* 1hnd_A* 1hnk_A 1mzs_A* 2eft_A* 2gyo_A* 3il9_A 1ebl_A* Back     alignment and structure
>3v4n_A HMG-COA synthase; hydroxymethylglutaryl-COA synthase, nitrosylation, transfera inhibitor complex; HET: BTB; 1.60A {Enterococcus faecalis} PDB: 3v4x_A* 1x9e_A 1ysl_B* 1ysl_A* 2hdb_A* Back     alignment and structure
>1zow_A 3-oxoacyl-[acyl-carrier-protein] synthase III; FABH, fatty acid biosynthesis, transferase; 2.00A {Staphylococcus aureus subsp} PDB: 3il7_A Back     alignment and structure
>2ebd_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, aquifex VF5, lipid metabolism, structural genomics; 2.10A {Aquifex aeolicus} Back     alignment and structure
>1ub7_A 3-oxoacyl-[acyl-carrier protein] synthase; fatty acid synthesis, beta-ketoacyl-ACP synthase III, FABH; 2.30A {Thermus thermophilus} SCOP: c.95.1.2 c.95.1.2 Back     alignment and structure
>1u6e_A 3-oxoacyl-[acyl-carrier-protein] synthase III; transferase; 1.85A {Mycobacterium tuberculosis} SCOP: c.95.1.2 c.95.1.2 PDB: 1u6s_A* 1m1m_A 1hzp_A* 2qnx_A* 2qnz_A* 2qo1_A* 2qx1_A* 2qo0_A* 2qny_A* 2ahb_A 2aj9_A Back     alignment and structure
>3tsy_A Fusion protein 4-coumarate--COA ligase 1, resvera synthase; transferase; 3.10A {Arabidospis thaliana} Back     alignment and structure
>1xpm_A 3-hydroxy-3-methylglutaryl COA synthase; HMG-COA synthase, HMGS, coenzyme A, thiolase fold, condensing enzyme; HET: HMG CAA; 1.60A {Staphylococcus aureus subsp} SCOP: c.95.1.2 c.95.1.2 PDB: 1xpl_A* 1xpk_A* 1tvz_A 1txt_A* Back     alignment and structure
>2p8u_A Hydroxymethylglutaryl-COA synthase, cytoplasmic; hydromethylglutaryl COA, mevalonate pathway, structural GENO structural genomics consortium, SGC; HET: COA; 2.00A {Homo sapiens} Back     alignment and structure
>2f82_A HMG-COA synthase; HMGS1, transferase; 2.10A {Brassica juncea} PDB: 2f9a_A* 2fa0_A* 2fa3_A* Back     alignment and structure
>2wya_A Hydroxymethylglutaryl-COA synthase, mitochondrial; steroid biosynthesis, cholesterol biosynthesis, mitochondrion, phosphoprotein; HET: HMG; 1.70A {Homo sapiens} Back     alignment and structure
>3lma_A Stage V sporulation protein AD (spovad); NESG, structural genomics, PSI-2, protein structure initiative; 1.99A {Bacillus licheniformis} PDB: 3lm6_A Back     alignment and structure
>4e1l_A Acetoacetyl-COA thiolase 2; 3-layer(ABA) sandwich, transferase; 2.00A {Clostridium difficile} Back     alignment and structure
>3ss6_A Acetyl-COA acetyltransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha beta; HET: CSO; 1.70A {Bacillus anthracis} Back     alignment and structure
>4dd5_A Acetyl-COA acetyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, thiolase; 1.25A {Clostridium difficile} Back     alignment and structure
>3ho9_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; FABF, platensimycin, platencin A1, KAS2, acyltransferase, fatty acid biosynthesis; HET: N3A; 1.90A {Escherichia coli} PDB: 3hnz_A* 3ho2_A* 3i8p_A* 3g11_A* 2gfx_A* 3g0y_A* 2gfv_A* 2gfw_A 2gfy_A* 1kas_A 1b3n_A Back     alignment and structure
>1tqy_A Beta-ketoacyl synthase/acyl transferase; alpha-beta-alpha-beta-alpha, heterodimer, transferase; 2.00A {Streptomyces coelicolor} SCOP: c.95.1.1 c.95.1.1 Back     alignment and structure
>3o04_A LMO2201 protein, beta-keto-acyl carrier protein synthase II; csgid, structural genomics; 1.85A {Listeria monocytogenes} Back     alignment and structure
>2gqd_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; duplicated babababb fold, transferase; 2.30A {Staphylococcus aureus} Back     alignment and structure
>1j3n_A 3-oxoacyl-(acyl-carrier protein) synthase II; condensing enzymes, fatty acid elongation, acyl-carrier protein (ACP); HET: CIT; 2.00A {Thermus thermophilus} SCOP: c.95.1.1 c.95.1.1 Back     alignment and structure
>3kzu_A 3-oxoacyl-(acyl-carrier-protein) synthase II; seattle structural genomics center for infectious disease, ssgcid, acyltransferase; 1.75A {Brucella melitensis} PDB: 3e60_A Back     alignment and structure
>3svk_A Acetyl-COA acetyltransferase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.20A {Mycobacterium avium} Back     alignment and structure
>1e5m_A KAS II, beta ketoacyl acyl carrier protein synthase II; condensing enzyme, biosynthetic role, carbon-carbon bond formation; 1.54A {Synechocystis SP} SCOP: c.95.1.1 c.95.1.1 Back     alignment and structure
>3goa_A 3-ketoacyl-COA thiolase; metabolism, fatty acid, phospholipid, IDP01071, acyltransferase, cytoplasm, fatty acid metabolism; 1.70A {Salmonella typhimurium} Back     alignment and structure
>2iik_A 3-ketoacyl-COA thiolase, peroxisomal; fatty acid metabolism, structural genomics, structural genom consortium, SGC, transferase; 2.55A {Homo sapiens} Back     alignment and structure
>1ox0_A Beta ketoacyl-acyl carrier protein synthase; transferase; 1.30A {Streptococcus pneumoniae} SCOP: c.95.1.1 c.95.1.1 PDB: 1oxh_A 2alm_A 2rjt_A Back     alignment and structure
>4ewg_A Beta-ketoacyl synthase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, transferase; 2.25A {Burkholderia phymatum} Back     alignment and structure
>4ddo_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; ssgcid, struct genomics, seattle structural genomics center for infectious transferase; 1.90A {Burkholderia vietnamiensis} PDB: 4f32_A* Back     alignment and structure
>2vu1_A Acetyl-COA acetyltransferase; acyltransferase, PHB biosynthesis, thiolase FOL; HET: CSO OPI; 1.51A {Zoogloea ramigera} PDB: 1nl7_A* 1ou6_A* 2vu0_A* 1m4s_A* 2vu2_A* 2wkv_A* 2wku_A* 1m1t_A 1m3k_A 1m1o_A 1m3z_A* 2vtz_A* 2wl5_A* 2wkt_A* 2wl4_A* 1m4t_A* 2wl6_A 1qfl_A* 1dlv_A* 1dlu_A* ... Back     alignment and structure
>2gp6_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; thiolase fold, structural genomics, PSI, protein structure initiative; 2.40A {Mycobacterium tuberculosis} Back     alignment and structure
>1wl4_A Acetyl-coenzyme A acetyltransferase 2; thiolase fold; HET: COA; 1.55A {Homo sapiens} PDB: 1wl5_A Back     alignment and structure
>1ulq_A Putative acetyl-COA acetyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 3.00A {Thermus thermophilus} SCOP: c.95.1.1 c.95.1.1 Back     alignment and structure
>1tqy_B Actinorhodin polyketide putative beta-ketoacyl SY; alpha-beta-alpha-beta-alpha, heterodimer, transferase; 2.00A {Streptomyces coelicolor} SCOP: c.95.1.1 c.95.1.1 Back     alignment and structure
>2ib8_A Acetyl-COA acetyltransferase; thiolase fold, potassium ION, chloride, beta-alpha-beta-ALPH alpha-beta-BETA topology; HET: MES; 1.85A {Homo sapiens} PDB: 2ib7_A* 2ib9_A* 2ibu_A* 2ibw_A* 2iby_A* 2f2s_A* Back     alignment and structure
>1wdk_C 3-ketoacyl-COA thiolase; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: c.95.1.1 c.95.1.1 PDB: 1wdl_C* 1wdm_C* 2d3t_C* Back     alignment and structure
>3mqd_A Beta-ketoacyl synthase; ssgcid, ALS collaborative crystallography, beta-ketoacyl SYN brucella melitensis, fragments of LIFE; HET: 3MQ; 1.25A {Brucella melitensis biovar abortus} PDB: 3lrf_A* 3u0e_A* 3u0f_A* Back     alignment and structure
>2iwz_A 3-oxoacyl-[acyl-carrier-protein] synthase; mitochondria, mitochondrion, lipid synthesis, fatty acid SYN fatty acid biosynthesis; 1.65A {Homo sapiens} PDB: 2iwy_A 2c9h_A Back     alignment and structure
>2vba_A 3-oxoacyl-[acyl-carrier-protein] synthase 1; cytoplasm, antibiotic, transferase, amino-thiazole, acyltransferase, lipid synthesis; HET: P4T; 1.36A {Escherichia coli} SCOP: c.95.1.1 c.95.1.1 PDB: 1fj4_A* 1g5x_A 2aq7_A* 1fj8_A* 2aqb_A 2bui_A 2buh_A 2vb7_A* 2vb8_A 2vb9_A* 1h4f_A 1dd8_A 2cdh_A 2bz4_A 2byz_A 2bz3_A* 2byy_A* 1f91_A* 2cf2_A 2byw_A ... Back     alignment and structure
>1afw_A 3-ketoacetyl-COA thiolase; fatty acid metabolism; 1.80A {Saccharomyces cerevisiae} SCOP: c.95.1.1 c.95.1.1 PDB: 1pxt_A Back     alignment and structure
>2wu9_A 3-ketoacyl-COA thiolase 2, peroxisomal; cysteine oxidation, fatty acid metabolism, oxylipin biosynthesis, plant lipid metabolism; 1.50A {Arabidopsis thaliana} PDB: 2c7y_A 2c7z_A 2wua_A Back     alignment and structure
>2ix4_A 3-oxoacyl-[acyl-carrier-protein] synthase; beta-ketoacyl-(acyl carrier protein) synthase, lipid metabol condensing enzyme; 1.95A {Arabidopsis thaliana} SCOP: c.95.1.1 c.95.1.1 PDB: 1w0i_A Back     alignment and structure
>2wge_A 3-oxoacyl-[acyl-carrier-protein] synthase 1; beta ketoacyl synthase I thiolactomycin, cytoplasm, transferase, acyltransferase; HET: TLM; 1.80A {Mycobacterium tuberculosis} PDB: 2wgd_A* 2wgg_A* 2wgf_A* Back     alignment and structure
>2qo3_A Eryaii erythromycin polyketide synthase modules 3; ketosynthase, acyltransferase, phosphopantetheine, transfera; 2.59A {Saccharopolyspora erythraea} Back     alignment and structure
>3hhd_A Fatty acid synthase; transferase, multienzyme, megasynthase, fatty acid synthesis, acetylation, cytoplasm, fatty acid biosynthesis, hydrolase; 2.15A {Homo sapiens} PDB: 2jfk_A* 2jfd_A Back     alignment and structure
>2hg4_A DEBS, 6-deoxyerythronolide B synthase; ketosynthase, acyltransferase, module 5, transferase; 2.73A {Saccharopolyspora erythraea} Back     alignment and structure
>4egv_A Acetyl-COA acetyltransferase; NEW SUB-family, thiolase fold; 2.71A {Mycobacterium smegmatis} Back     alignment and structure
>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A* Back     alignment and structure
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A* Back     alignment and structure
>2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae} Back     alignment and structure
>2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A* Back     alignment and structure
>2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A* Back     alignment and structure
>3gwa_A 3-oxoacyl-(acyl-carrier-protein) synthase III; structural genomics, synthetase; 1.60A {Burkholderia pseudomallei} PDB: 3gwe_A Back     alignment and structure
>4dfe_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; ssgcid, seattle structural genomics center for infectious DI transferase; 2.35A {Burkholderia xenovorans} Back     alignment and structure
>3s3l_A CERJ; acyltransferase, FABH homologue, KS III homologue, dimethyl transfer, transferase; 2.00A {Streptomyces tendae} PDB: 3t5y_A* 3t6s_A* 3t8e_A 3t5y_B* Back     alignment and structure
>3il3_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, fatty acid biosynthesis, antibiotic, acyltransferase, cytoplasm, lipid synthesis; 2.70A {Haemophilus influenzae} Back     alignment and structure
>4ewp_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; transferase; 2.20A {Micrococcus luteus nctc 2665} Back     alignment and structure
>1mzj_A Beta-ketoacylsynthase III; beta-ketosynthase, aromatic polyketide, biosynthetic engineering, catalytic triad, transferase; HET: COA; 2.10A {Streptomyces SP} SCOP: c.95.1.2 c.95.1.2 Back     alignment and structure
>2x3e_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; HED, transferase, acyltransferase, lipid synthesis, multifun enzyme; 1.81A {Pseudomonas aeruginosa} Back     alignment and structure
>3h78_A PQS biosynthetic enzyme; PQSD, anthranilic acid, anthraniloyl-COA, transferase; HET: BE2; 1.70A {Pseudomonas aeruginosa PAO1} PDB: 3h76_A 3h77_A* Back     alignment and structure
>3lma_A Stage V sporulation protein AD (spovad); NESG, structural genomics, PSI-2, protein structure initiative; 1.99A {Bacillus licheniformis} PDB: 3lm6_A Back     alignment and structure
>3s21_A 3-oxoacyl-[ACP] synthase III; non-decarboxylative claisen condensation reaction, transfera; HET: CER; 1.70A {Xanthomonas campestris PV} PDB: 3s23_A* 3row_A 3s1z_A 3s20_A* 3fk5_A Back     alignment and structure
>4efi_A 3-oxoacyl-(acyl-carrier protein) synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.35A {Burkholderia xenovorans} Back     alignment and structure
>1u6e_A 3-oxoacyl-[acyl-carrier-protein] synthase III; transferase; 1.85A {Mycobacterium tuberculosis} SCOP: c.95.1.2 c.95.1.2 PDB: 1u6s_A* 1m1m_A 1hzp_A* 2qnx_A* 2qnz_A* 2qo1_A* 2qx1_A* 2qo0_A* 2qny_A* 2ahb_A 2aj9_A Back     alignment and structure
>1hnj_A Beta-ketoacyl-acyl carrier protein synthase III; FABH, transferase; HET: MLC; 1.46A {Escherichia coli} SCOP: c.95.1.2 c.95.1.2 PDB: 1hn9_A* 1hnh_A* 1hnd_A* 1hnk_A 1mzs_A* 2eft_A* 2gyo_A* 3il9_A 1ebl_A* Back     alignment and structure
>1zow_A 3-oxoacyl-[acyl-carrier-protein] synthase III; FABH, fatty acid biosynthesis, transferase; 2.00A {Staphylococcus aureus subsp} PDB: 3il7_A Back     alignment and structure
>2ebd_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, aquifex VF5, lipid metabolism, structural genomics; 2.10A {Aquifex aeolicus} Back     alignment and structure
>1ub7_A 3-oxoacyl-[acyl-carrier protein] synthase; fatty acid synthesis, beta-ketoacyl-ACP synthase III, FABH; 2.30A {Thermus thermophilus} SCOP: c.95.1.2 c.95.1.2 Back     alignment and structure
>1ted_A PKS18; thiolase fold, substrate binding tunnel, transferase; HET: MYR; 2.25A {Mycobacterium tuberculosis} SCOP: c.95.1.2 PDB: 1tee_A Back     alignment and structure
>4e1l_A Acetoacetyl-COA thiolase 2; 3-layer(ABA) sandwich, transferase; 2.00A {Clostridium difficile} Back     alignment and structure
>1u0m_A Putative polyketide synthase; type III polyketide synthase, PKS, bacterial, thiolase fold, beta-alpha-beta-alpha fold, catalytic triad; HET: 15P; 2.22A {Streptomyces coelicolor} SCOP: c.95.1.2 c.95.1.2 Back     alignment and structure
>1ulq_A Putative acetyl-COA acetyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 3.00A {Thermus thermophilus} SCOP: c.95.1.1 c.95.1.1 Back     alignment and structure
>3svk_A Acetyl-COA acetyltransferase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.20A {Mycobacterium avium} Back     alignment and structure
>3ss6_A Acetyl-COA acetyltransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha beta; HET: CSO; 1.70A {Bacillus anthracis} Back     alignment and structure
>3led_A 3-oxoacyl-acyl carrier protein synthase III; structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.45A {Rhodopseudomonas palustris} Back     alignment and structure
>4dd5_A Acetyl-COA acetyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, thiolase; 1.25A {Clostridium difficile} Back     alignment and structure
>1wl4_A Acetyl-coenzyme A acetyltransferase 2; thiolase fold; HET: COA; 1.55A {Homo sapiens} PDB: 1wl5_A Back     alignment and structure
>2vu1_A Acetyl-COA acetyltransferase; acyltransferase, PHB biosynthesis, thiolase FOL; HET: CSO OPI; 1.51A {Zoogloea ramigera} PDB: 1nl7_A* 1ou6_A* 2vu0_A* 1m4s_A* 2vu2_A* 2wkv_A* 2wku_A* 1m1t_A 1m3k_A 1m1o_A 1m3z_A* 2vtz_A* 2wl5_A* 2wkt_A* 2wl4_A* 1m4t_A* 2wl6_A 1qfl_A* 1dlv_A* 1dlu_A* ... Back     alignment and structure
>2h84_A Steely1; thiolase-fold, type III polyketide synthase, PKS, chalcone-S synthase superfamily, type I PKS; HET: P6G; 2.90A {Dictyostelium discoideum} Back     alignment and structure
>3goa_A 3-ketoacyl-COA thiolase; metabolism, fatty acid, phospholipid, IDP01071, acyltransferase, cytoplasm, fatty acid metabolism; 1.70A {Salmonella typhimurium} Back     alignment and structure
>1wdk_C 3-ketoacyl-COA thiolase; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: c.95.1.1 c.95.1.1 PDB: 1wdl_C* 1wdm_C* 2d3t_C* Back     alignment and structure
>3tsy_A Fusion protein 4-coumarate--COA ligase 1, resvera synthase; transferase; 3.10A {Arabidospis thaliana} Back     alignment and structure
>4egv_A Acetyl-COA acetyltransferase; NEW SUB-family, thiolase fold; 2.71A {Mycobacterium smegmatis} Back     alignment and structure
>2d3m_A Pentaketide chromone synthase; chalcone synthase, polyketide synthase, transferase; HET: COA; 1.60A {Aloe arborescens} PDB: 2d51_A 2d52_A* Back     alignment and structure
>1xpm_A 3-hydroxy-3-methylglutaryl COA synthase; HMG-COA synthase, HMGS, coenzyme A, thiolase fold, condensing enzyme; HET: HMG CAA; 1.60A {Staphylococcus aureus subsp} SCOP: c.95.1.2 c.95.1.2 PDB: 1xpl_A* 1xpk_A* 1tvz_A 1txt_A* Back     alignment and structure
>1xho_A Chorismate mutase; southeast collaboratory for structural genomics, secsg, protein structure initiative, PSI, structural genomics; 2.20A {Clostridium thermocellum} SCOP: d.79.1.2 Back     alignment and structure
>2iik_A 3-ketoacyl-COA thiolase, peroxisomal; fatty acid metabolism, structural genomics, structural genom consortium, SGC, transferase; 2.55A {Homo sapiens} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 401
d1teda_372 c.95.1.2 (A:) Polyketide synthase PKS18 {Mycobacte 4e-49
d1u0ma1200 c.95.1.2 (A:2-201) Putative polyketide synthase SC 2e-25
d1ee0a2160 c.95.1.2 (A:236-395) Pyrone synthase (PyS, chalcon 6e-23
d1u0ua2156 c.95.1.2 (A:238-393) Dihydropinosylvin synthase {S 3e-21
d1bi5a2154 c.95.1.2 (A:236-389) Chalcone synthase {Alfalfa (M 6e-21
d1u0ma2148 c.95.1.2 (A:202-349) Putative polyketide synthase 7e-20
d1bi5a1235 c.95.1.2 (A:1-235) Chalcone synthase {Alfalfa (Med 4e-17
d1u6ea2148 c.95.1.2 (A:175-317) Ketoacyl-ACP synthase III (Fa 2e-13
d1mzja2153 c.95.1.2 (A:184-336) Priming beta-ketosynthase fro 3e-12
d1ub7a2149 c.95.1.2 (A:174-322) Ketoacyl-ACP synthase III (Fa 6e-12
d1hnja2143 c.95.1.2 (A:175-317) Ketoacyl-ACP synthase III (Fa 4e-10
>d1teda_ c.95.1.2 (A:) Polyketide synthase PKS18 {Mycobacterium tuberculosis [TaxId: 1773]} Length = 372 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Chalcone synthase-like
domain: Polyketide synthase PKS18
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score =  168 bits (426), Expect = 4e-49
 Identities = 62/372 (16%), Positives = 123/372 (33%), Gaps = 37/372 (9%)

Query: 19  RVPFSHFVEHFTTSNVFDKESLDFQEKVLEKSGI-------GDESCIPLNLHEMQPDVS- 70
            V  S   +      + D    +   +V +KS I                       +  
Sbjct: 25  VVNQSDAADRVAELFL-DPGQRERIPRVYQKSRITTRRMAVDPLDAKFDVFRREPATIRD 83

Query: 71  -LKRSREETEEVLCTIVKDLLSKHKINPKSIDILVTNCSIFCPTPSISSMIINKFGFRSN 129
            +    E    +   + K  L+        I +LV   S     P +   I+ + G   +
Sbjct: 84  RMHLFYEHAVPLAVDVSKRALAGLPYRAAEIGLLVLATSTGFIAPGVDVAIVKELGLSPS 143

Query: 130 IKSINLSGMGCSAGILSISLVKDLLKVHKNSLALVLSMEAISSNGYTGSTKSMLISNTVF 189
           I  + ++ MGC+A + ++    + ++ H    ALV+ +E  S N       + ++ +++F
Sbjct: 144 ISRVVVNFMGCAAAMNALGTATNYVRAHPAMKALVVCIELCSVNAVFADDINDVVIHSLF 203

Query: 190 RMGGAAILLSNRQQDKHIAKYKLKHLVRTHMGYDDQAYSSVFQQQDKDGNVGVSISRSLL 249
             G AA+++   Q  + +   K+          D+     V                   
Sbjct: 204 GDGCAALVIGASQVQEKLEPGKVVVRSSFSQLLDNTEDGIVLGVNHNG------------ 251

Query: 250 PVAARALRINISQLGPHVL-PYSEQLKYLWSVVCKKSKTYVPNFKKAFEHFCIHAGGRAI 308
                       +L  ++       +  + + +   +   + +       + IH GG  I
Sbjct: 252 ---------ITCELSENLPGYIFSGVAPVVTEMLWDNGLQISDID----LWAIHPGGPKI 298

Query: 309 IDAVEENLKLSKEDGEASRMTLYRFGNTSSSSYWYELCYLEAKGKVKKG-DRVWQIAFGS 367
           I+    +L +S E    S   L RFGN  S S  + L  +  + +  K        AFG 
Sbjct: 299 IEQSVRSLGISAELAAQSWDVLARFGNMLSVSLIFVLETMVQQAESAKAISTGVAFAFGP 358

Query: 368 GFKVNSAVWKCV 379
           G  V   ++  +
Sbjct: 359 GVTVEGMLFDII 370
>d1u0ma1 c.95.1.2 (A:2-201) Putative polyketide synthase SCO1206 {Streptomyces coelicolor [TaxId: 1902]} Length = 200 Back     information, alignment and structure
>d1ee0a2 c.95.1.2 (A:236-395) Pyrone synthase (PyS, chalcone synthase 2) {Gerbera hybrid cultivar [TaxId: 18101]} Length = 160 Back     information, alignment and structure
>d1u0ua2 c.95.1.2 (A:238-393) Dihydropinosylvin synthase {Scots pine (Pinus sylvestris) [TaxId: 3349]} Length = 156 Back     information, alignment and structure
>d1bi5a2 c.95.1.2 (A:236-389) Chalcone synthase {Alfalfa (Medicago sativa) [TaxId: 3879]} Length = 154 Back     information, alignment and structure
>d1u0ma2 c.95.1.2 (A:202-349) Putative polyketide synthase SCO1206 {Streptomyces coelicolor [TaxId: 1902]} Length = 148 Back     information, alignment and structure
>d1bi5a1 c.95.1.2 (A:1-235) Chalcone synthase {Alfalfa (Medicago sativa) [TaxId: 3879]} Length = 235 Back     information, alignment and structure
>d1u6ea2 c.95.1.2 (A:175-317) Ketoacyl-ACP synthase III (FabH) {Mycobacterium tuberculosis [TaxId: 1773]} Length = 148 Back     information, alignment and structure
>d1mzja2 c.95.1.2 (A:184-336) Priming beta-ketosynthase from the r1128 polyketide biosynthetic pathway {Streptomyces sp. r1128 [TaxId: 140437]} Length = 153 Back     information, alignment and structure
>d1ub7a2 c.95.1.2 (A:174-322) Ketoacyl-ACP synthase III (FabH) {Thermus thermophilus [TaxId: 274]} Length = 149 Back     information, alignment and structure
>d1hnja2 c.95.1.2 (A:175-317) Ketoacyl-ACP synthase III (FabH) {Escherichia coli [TaxId: 562]} Length = 143 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query401
d1teda_372 Polyketide synthase PKS18 {Mycobacterium tuberculo 100.0
d1u0ma1200 Putative polyketide synthase SCO1206 {Streptomyces 100.0
d1hnja1174 Ketoacyl-ACP synthase III (FabH) {Escherichia coli 100.0
d1u6ea1184 Ketoacyl-ACP synthase III (FabH) {Mycobacterium tu 100.0
d1mzja1181 Priming beta-ketosynthase from the r1128 polyketid 100.0
d1ub7a1172 Ketoacyl-ACP synthase III (FabH) {Thermus thermoph 100.0
d1bi5a1235 Chalcone synthase {Alfalfa (Medicago sativa) [TaxI 100.0
d1xpma1166 3-hydroxy-3-methylglutaryl CoA synthase MvaS {Stap 99.97
d1hnja2143 Ketoacyl-ACP synthase III (FabH) {Escherichia coli 99.94
d1ub7a2149 Ketoacyl-ACP synthase III (FabH) {Thermus thermoph 99.92
d1mzja2153 Priming beta-ketosynthase from the r1128 polyketid 99.91
d1u0ma2148 Putative polyketide synthase SCO1206 {Streptomyces 99.9
d1u6ea2148 Ketoacyl-ACP synthase III (FabH) {Mycobacterium tu 99.9
d1ee0a2160 Pyrone synthase (PyS, chalcone synthase 2) {Gerber 99.89
d1bi5a2154 Chalcone synthase {Alfalfa (Medicago sativa) [TaxI 99.89
d1u0ua2156 Dihydropinosylvin synthase {Scots pine (Pinus sylv 99.89
d1ulqa1273 Beta-ketoadipyl CoA thiolase {Thermus thermophilus 99.14
d1j3na1249 Beta-ketoacyl-ACP synthase II {Thermus thermophilu 99.12
d1m3ka1268 Biosynthetic thiolase {Zoogloea ramigera [TaxId: 3 99.12
d1ox0a1256 Beta-ketoacyl-ACP synthase II {Streptococcus pneum 99.04
d1wdkc1262 Fatty oxidation complex beta subunit (3-ketoacyl-C 99.01
d2gfva1250 Beta-ketoacyl-ACP synthase II {Escherichia coli [T 98.99
d1xpma2221 3-hydroxy-3-methylglutaryl CoA synthase MvaS {Stap 98.87
d1afwa1269 Thiolase {Baker's yeast (Saccharomyces cerevisiae) 98.83
d1e5ma1250 Beta-ketoacyl-ACP synthase II {Synechocystis sp. [ 98.8
d2vbaa1253 Beta-ketoacyl-ACP synthase I {Escherichia coli [Ta 98.6
d2ix4a1270 Beta-ketoacyl-ACP synthase II {Thale cress (Arabid 98.49
d1tqya1216 Actinorhodin polyketide putative beta-ketoacyl syn 98.44
d1tqyb1208 Actinorhodin polyketide putative beta-ketoacyl syn 98.27
d1u6ea2148 Ketoacyl-ACP synthase III (FabH) {Mycobacterium tu 97.14
d1ub7a2149 Ketoacyl-ACP synthase III (FabH) {Thermus thermoph 97.13
d1mzja2153 Priming beta-ketosynthase from the r1128 polyketid 97.13
d1hnja2143 Ketoacyl-ACP synthase III (FabH) {Escherichia coli 96.49
d1tqyb2194 Actinorhodin polyketide putative beta-ketoacyl syn 94.47
d1teda_372 Polyketide synthase PKS18 {Mycobacterium tuberculo 93.88
d1tqya2205 Actinorhodin polyketide putative beta-ketoacyl syn 93.57
d1m3ka2124 Biosynthetic thiolase {Zoogloea ramigera [TaxId: 3 93.45
d1u0ma2148 Putative polyketide synthase SCO1206 {Streptomyces 93.3
d1ulqa2125 Beta-ketoadipyl CoA thiolase {Thermus thermophilus 91.23
d1afwa2124 Thiolase {Baker's yeast (Saccharomyces cerevisiae) 88.19
d1m3ka2124 Biosynthetic thiolase {Zoogloea ramigera [TaxId: 3 88.02
d1afwa2124 Thiolase {Baker's yeast (Saccharomyces cerevisiae) 87.32
d1wdkc2128 Fatty oxidation complex beta subunit (3-ketoacyl-C 86.88
d1xhoa_112 Chorismate mutase {Clostridium thermocellum [TaxId 84.31
d1u0ua2156 Dihydropinosylvin synthase {Scots pine (Pinus sylv 84.16
d1bi5a2154 Chalcone synthase {Alfalfa (Medicago sativa) [TaxI 83.77
d1ee0a2160 Pyrone synthase (PyS, chalcone synthase 2) {Gerber 80.52
>d1teda_ c.95.1.2 (A:) Polyketide synthase PKS18 {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Chalcone synthase-like
domain: Polyketide synthase PKS18
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=100.00  E-value=6.9e-56  Score=434.76  Aligned_cols=349  Identities=18%  Similarity=0.237  Sum_probs=266.6

Q ss_pred             ceEEEeeeeecCCCCCccCHHHHHHHHHhcCCCChhhHHHHHHHHHHcCCCCceecCCCccCC-----CCCCC----hHH
Q 044359            3 GVYLVDFTCYHPADSLRVPFSHFVEHFTTSNVFDKESLDFQEKVLEKSGIGDESCIPLNLHEM-----QPDVS----LKR   73 (401)
Q Consensus         3 ~v~I~~~g~~lP~~~~~v~~~e~~~~~~~~~~~~~~~~~~~~~i~~~~GI~~R~~~~~~~~~~-----~~~~~----l~~   73 (401)
                      ..+|.|+|+|+|++.  |+|+|+.+.+..... +++..+++.+|++++||++||++.++.+..     +...+    +..
T Consensus        11 ~a~I~g~g~~~P~~~--v~n~e~~~~~~~~~~-~~~~~~~~~ri~~~tGI~~R~~~~~~~~~~~~~~~~~~~~~~~r~~~   87 (372)
T d1teda_          11 VAVIEGLATGTPRRV--VNQSDAADRVAELFL-DPGQRERIPRVYQKSRITTRRMAVDPLDAKFDVFRREPATIRDRMHL   87 (372)
T ss_dssp             EEEEEEEEEECCSCE--EEHHHHHHHHHTC-----CCTTHHHHHHHTSCCSEEECSSCTTSTTHHHHTTCSSCHHHHHHH
T ss_pred             eEEEEEEEEeCCCeE--EcHHHHHHHHHhhcC-ChHHHHHHHHHHHccCCcccceeccccccchhhhhhcCCCHHHHHHH
Confidence            468999999999997  999999999875422 233446678999999999999986643211     11122    345


Q ss_pred             HHHHHHHHHHHHHHHHHHhCCCCcCCcCEEEEeeecCCCCCcHHHHHHHHcCCCCCcceEEeecccchhHHHHHHHHHHH
Q 044359           74 SREETEEVLCTIVKDLLSKHKINPKSIDILVTNCSIFCPTPSISSMIINKFGFRSNIKSINLSGMGCSAGILSISLVKDL  153 (401)
Q Consensus        74 ~~~~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~p~~a~~l~~~LGl~~~~~~~~i~~~gC~~~~~aL~~A~~~  153 (401)
                      +.+++.+|+++|+++||+++|++|+|||+||++|++++..|+++++|+++||+++++.+++++++||+|++.||++|.++
T Consensus        88 ~~e~~~~la~~Aa~~aL~~ag~~~~dId~lI~~t~t~~~~P~~a~~v~~~LGl~~~~~~~~~~~~gC~g~~~aL~~A~~~  167 (372)
T d1teda_          88 FYEHAVPLAVDVSKRALAGLPYRAAEIGLLVLATSTGFIAPGVDVAIVKELGLSPSISRVVVNFMGCAAAMNALGTATNY  167 (372)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCCCCGGGEEEEEEEESSCCCSSCHHHHHHHHHTCCTTCEEEEEESCGGGHHHHHHHHHHHH
T ss_pred             HHhHHHHHHHHHHHHHHHHcCCCHHHCCEEEEeccCCCCCchHHHHHHhhhccCCceeEeeccccCccHHHHHHHHHHHH
Confidence            67889999999999999999999999999999988888999999999999999877888999877999999999999999


Q ss_pred             HHcCCCCeEEEEeeccccCCCCCCCCcchhhhhhcccccceEEEEecCCCCcc--ccceEEeeeeeecccCCcccccccc
Q 044359          154 LKVHKNSLALVLSMEAISSNGYTGSTKSMLISNTVFRMGGAAILLSNRQQDKH--IAKYKLKHLVRTHMGYDDQAYSSVF  231 (401)
Q Consensus       154 i~~g~~~~vLvv~~e~~s~~~~~~~d~~~~i~~~lfGDGAaA~ll~~~~~~~~--~~~~~l~~~~~~~~~~~~~~~~~~~  231 (401)
                      +++++.++||||++|.+|..+++..+..+.++.++|||||+|+||++++....  ...+.+.+... +...+..  +.+.
T Consensus       168 l~sg~~~~~LVV~~E~~s~~~~~~d~~~~~~~~~lfGDGAaA~ll~~~~~~~~~~~~~~~~~~~~~-~~~~~~~--~~~~  244 (372)
T d1teda_         168 VRAHPAMKALVVCIELCSVNAVFADDINDVVIHSLFGDGCAALVIGASQVQEKLEPGKVVVRSSFS-QLLDNTE--DGIV  244 (372)
T ss_dssp             HHHSTTCEEEEEEEEECGGGCCCCSSHHHHHHHHHBCEEEEEEEEEEECTTSCCCTTCEEEEEEEE-EECTTCT--TSEE
T ss_pred             HhcCCCccceeeeehhhcccccCCCcchhhhhhhhhcccceeEEeccCCcccccCCceeEEecccc-cccCCCc--cccc
Confidence            99999999999999999988766455556667889999999999998765421  11122222111 1111111  1111


Q ss_pred             ccccCCCCeeeEeccCchHHHHHHHHHHHHhhCCCCCchhHHHHHHHHHHhhhccCCCcchhhhcceEeecCCChHHHHH
Q 044359          232 QQQDKDGNVGVSISRSLLPVAARALRINISQLGPHVLPYSEQLKYLWSVVCKKSKTYVPNFKKAFEHFCIHAGGRAIIDA  311 (401)
Q Consensus       232 ~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~did~~i~Hq~~~~~~~~  311 (401)
                      +..+ .....+...++++....+.+...+..+       ++.            .++.   .+|||+|++||+|+++++.
T Consensus       245 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~~-------L~~------------~gl~---~~did~~i~Hq~~~~i~~~  301 (372)
T d1teda_         245 LGVN-HNGITCELSENLPGYIFSGVAPVVTEM-------LWD------------NGLQ---ISDIDLWAIHPGGPKIIEQ  301 (372)
T ss_dssp             EEEE-TTEEEEEECTTHHHHHHHHHHHHHHHH-------HHH------------TTCC---GGGCSCEEECCSCHHHHHH
T ss_pred             cCCC-CCcceeechHHHHHHHHHHHHHHHHHH-------HHh------------cCCC---HHHhhhhhccCccHHHHHH
Confidence            1111 111223344555544433332222211       111            3555   7999999999999999999


Q ss_pred             HHHHcCCCchhhhhhHHHHhhhcCcccchHHHHHHHHHHcCCCCCC-CeEEEEeeccchhhcceeeeeec
Q 044359          312 VEENLKLSKEDGEASRMTLYRFGNTSSSSYWYELCYLEAKGKVKKG-DRVWQIAFGSGFKVNSAVWKCVS  380 (401)
Q Consensus       312 ~~~~lgi~~e~~~~s~~~~~~~Gn~~sasi~~~L~~~~~~g~l~~G-d~vll~~~G~G~s~~~~~l~~~~  380 (401)
                      +.+.||++++|+..++.++++||||+|||+|++|++++++|++.+| |++++++||+|++|+++|||+..
T Consensus       302 i~~~Lgl~~ek~~~s~~~l~~~GN~~sasip~~L~~~l~~g~~~~g~d~vll~~fG~G~s~~~~ll~~~~  371 (372)
T d1teda_         302 SVRSLGISAELAAQSWDVLARFGNMLSVSLIFVLETMVQQAESAKAISTGVAFAFGPGVTVEGMLFDIIR  371 (372)
T ss_dssp             HHHHHTCCGGGGHHHHHHHHHHCBCTHHHHHHHHHHHHHSCSSSSSSEEEEEEEEETTTEEEEEEEEECC
T ss_pred             HHHHcCCCHHHhhhhHHHHhccCCcHHHHHHHHHHHHHHhCCCCCCCCEEEEEEEcHHHhHHHHhheeec
Confidence            9999999999998778889999999999999999999999988765 89999999999999999999864
>d1u0ma1 c.95.1.2 (A:2-201) Putative polyketide synthase SCO1206 {Streptomyces coelicolor [TaxId: 1902]} Back     information, alignment and structure
>d1hnja1 c.95.1.2 (A:1-174) Ketoacyl-ACP synthase III (FabH) {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1mzja1 c.95.1.2 (A:3-183) Priming beta-ketosynthase from the r1128 polyketide biosynthetic pathway {Streptomyces sp. r1128 [TaxId: 140437]} Back     information, alignment and structure
>d1ub7a1 c.95.1.2 (A:2-173) Ketoacyl-ACP synthase III (FabH) {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1bi5a1 c.95.1.2 (A:1-235) Chalcone synthase {Alfalfa (Medicago sativa) [TaxId: 3879]} Back     information, alignment and structure
>d1xpma1 c.95.1.2 (A:2-167) 3-hydroxy-3-methylglutaryl CoA synthase MvaS {Staphylococcus aureus [TaxId: 1280]} Back     information, alignment and structure
>d1hnja2 c.95.1.2 (A:175-317) Ketoacyl-ACP synthase III (FabH) {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1ub7a2 c.95.1.2 (A:174-322) Ketoacyl-ACP synthase III (FabH) {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1mzja2 c.95.1.2 (A:184-336) Priming beta-ketosynthase from the r1128 polyketide biosynthetic pathway {Streptomyces sp. r1128 [TaxId: 140437]} Back     information, alignment and structure
>d1u0ma2 c.95.1.2 (A:202-349) Putative polyketide synthase SCO1206 {Streptomyces coelicolor [TaxId: 1902]} Back     information, alignment and structure
>d1u6ea2 c.95.1.2 (A:175-317) Ketoacyl-ACP synthase III (FabH) {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d1ee0a2 c.95.1.2 (A:236-395) Pyrone synthase (PyS, chalcone synthase 2) {Gerbera hybrid cultivar [TaxId: 18101]} Back     information, alignment and structure
>d1bi5a2 c.95.1.2 (A:236-389) Chalcone synthase {Alfalfa (Medicago sativa) [TaxId: 3879]} Back     information, alignment and structure
>d1u0ua2 c.95.1.2 (A:238-393) Dihydropinosylvin synthase {Scots pine (Pinus sylvestris) [TaxId: 3349]} Back     information, alignment and structure
>d1ulqa1 c.95.1.1 (A:3-275) Beta-ketoadipyl CoA thiolase {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1j3na1 c.95.1.1 (A:1-249) Beta-ketoacyl-ACP synthase II {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1m3ka1 c.95.1.1 (A:1-268) Biosynthetic thiolase {Zoogloea ramigera [TaxId: 350]} Back     information, alignment and structure
>d1wdkc1 c.95.1.1 (C:2-263) Fatty oxidation complex beta subunit (3-ketoacyl-CoA thiolase) {Pseudomonas fragi [TaxId: 296]} Back     information, alignment and structure
>d2gfva1 c.95.1.1 (A:2-251) Beta-ketoacyl-ACP synthase II {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1xpma2 c.95.1.2 (A:168-388) 3-hydroxy-3-methylglutaryl CoA synthase MvaS {Staphylococcus aureus [TaxId: 1280]} Back     information, alignment and structure
>d1afwa1 c.95.1.1 (A:25-293) Thiolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1e5ma1 c.95.1.1 (A:6-255) Beta-ketoacyl-ACP synthase II {Synechocystis sp. [TaxId: 1143]} Back     information, alignment and structure
>d2vbaa1 c.95.1.1 (A:1-253) Beta-ketoacyl-ACP synthase I {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2ix4a1 c.95.1.1 (A:31-300) Beta-ketoacyl-ACP synthase II {Thale cress (Arabidopsis thaliana), mitochondrial isoform [TaxId: 3702]} Back     information, alignment and structure
>d1tqya1 c.95.1.1 (A:3-218) Actinorhodin polyketide putative beta-ketoacyl synthase 1, KasA {Streptomyces coelicolor [TaxId: 1902]} Back     information, alignment and structure
>d1tqyb1 c.95.1.1 (B:2-209) Actinorhodin polyketide putative beta-ketoacyl synthase 2, KasB {Streptomyces coelicolor [TaxId: 1902]} Back     information, alignment and structure
>d1u6ea2 c.95.1.2 (A:175-317) Ketoacyl-ACP synthase III (FabH) {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d1ub7a2 c.95.1.2 (A:174-322) Ketoacyl-ACP synthase III (FabH) {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1mzja2 c.95.1.2 (A:184-336) Priming beta-ketosynthase from the r1128 polyketide biosynthetic pathway {Streptomyces sp. r1128 [TaxId: 140437]} Back     information, alignment and structure
>d1hnja2 c.95.1.2 (A:175-317) Ketoacyl-ACP synthase III (FabH) {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1tqyb2 c.95.1.1 (B:210-403) Actinorhodin polyketide putative beta-ketoacyl synthase 2, KasB {Streptomyces coelicolor [TaxId: 1902]} Back     information, alignment and structure
>d1teda_ c.95.1.2 (A:) Polyketide synthase PKS18 {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d1tqya2 c.95.1.1 (A:219-423) Actinorhodin polyketide putative beta-ketoacyl synthase 1, KasA {Streptomyces coelicolor [TaxId: 1902]} Back     information, alignment and structure
>d1m3ka2 c.95.1.1 (A:269-392) Biosynthetic thiolase {Zoogloea ramigera [TaxId: 350]} Back     information, alignment and structure
>d1u0ma2 c.95.1.2 (A:202-349) Putative polyketide synthase SCO1206 {Streptomyces coelicolor [TaxId: 1902]} Back     information, alignment and structure
>d1ulqa2 c.95.1.1 (A:276-400) Beta-ketoadipyl CoA thiolase {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1afwa2 c.95.1.1 (A:294-417) Thiolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1m3ka2 c.95.1.1 (A:269-392) Biosynthetic thiolase {Zoogloea ramigera [TaxId: 350]} Back     information, alignment and structure
>d1afwa2 c.95.1.1 (A:294-417) Thiolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1wdkc2 c.95.1.1 (C:264-391) Fatty oxidation complex beta subunit (3-ketoacyl-CoA thiolase) {Pseudomonas fragi [TaxId: 296]} Back     information, alignment and structure
>d1xhoa_ d.79.1.2 (A:) Chorismate mutase {Clostridium thermocellum [TaxId: 1515]} Back     information, alignment and structure
>d1u0ua2 c.95.1.2 (A:238-393) Dihydropinosylvin synthase {Scots pine (Pinus sylvestris) [TaxId: 3349]} Back     information, alignment and structure
>d1bi5a2 c.95.1.2 (A:236-389) Chalcone synthase {Alfalfa (Medicago sativa) [TaxId: 3879]} Back     information, alignment and structure
>d1ee0a2 c.95.1.2 (A:236-395) Pyrone synthase (PyS, chalcone synthase 2) {Gerbera hybrid cultivar [TaxId: 18101]} Back     information, alignment and structure